BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017159
(376 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359484398|ref|XP_003633103.1| PREDICTED: uncharacterized protein LOC100853647 [Vitis vinifera]
gi|147821411|emb|CAN63506.1| hypothetical protein VITISV_011681 [Vitis vinifera]
Length = 324
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/308 (63%), Positives = 240/308 (77%), Gaps = 6/308 (1%)
Query: 24 YINKTLSRTRPILSAVVQSSSLLGQSHESGSLHESRKFPGSAAASLLRSKSPDSLLNQAN 83
++N+T R SA VQ SS+ Q+ ESG+ ES+K G AA + R ++P+SLL QAN
Sbjct: 12 FLNRTWCSGRSNPSAAVQLSSVFIQTDESGNTPESKKILGPVAA-VARCQAPNSLLTQAN 70
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSL---KSK 140
T+GI+GGVSV STL FL KLVW+S++ EE PFVVC+DP LN EL S+ K+
Sbjct: 71 TVGILGGVSVFSTLIFLEKLVWWSSRHGEESLPFVVCSDPTLNRELASPSLSPFFRGKNA 130
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
QLDH G + +NLR KRAFLEQ+GARCIVMPCH++HAWH +VS+GC +PFLHVGECVA
Sbjct: 131 QFQLDH--GPIVENLRCKRAFLEQSGARCIVMPCHLAHAWHSEVSKGCPLPFLHVGECVA 188
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
ELK+AK KPLEAGS VRIGVLA TL AGFYQEKLQ+QGFEVVLPD ATMEH+++P I
Sbjct: 189 SELKKAKFKPLEAGSNVRIGVLAPGETLMAGFYQEKLQSQGFEVVLPDMATMEHIVVPAI 248
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALAR 320
EAL+ +DMEGARNLLRI + + L+RAVN VI+ SDEMQ +LP+DDPL KKCI+PMDALAR
Sbjct: 249 EALHRKDMEGARNLLRIAVHIFLMRAVNIVILASDEMQDLLPRDDPLSKKCINPMDALAR 308
Query: 321 STVTWARS 328
ST+ WA+S
Sbjct: 309 STIGWAKS 316
>gi|147819141|emb|CAN68957.1| hypothetical protein VITISV_015733 [Vitis vinifera]
Length = 330
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/335 (60%), Positives = 254/335 (75%), Gaps = 12/335 (3%)
Query: 6 ISMSLQTPNCPPFFLSTVYINKTLSRT--RPILSAVVQSSSLLGQSHESGSLHESRKFPG 63
++MS + P + V+ + L RT PIL AV SS+LL Q+ ESG+L ES+ G
Sbjct: 1 MAMSFHSLKYPSHMMGNVHKHXILXRTMKNPIL-AVPPSSTLL-QTDESGNLPESKNSSG 58
Query: 64 SAAASLLRSKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDP 123
S AAS S S +NQA T+GIIGGVSV STLNFL KLV +S+KD + PFV+C+DP
Sbjct: 59 SDAAST-NSDSASLFINQATTVGIIGGVSVDSTLNFLKKLVQWSSKDGGDSLPFVLCSDP 117
Query: 124 ALNEELF-----HASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISH 178
LN++L H + S K ++ ++DH + NL+ KRAFLE++G +CIVMPCHISH
Sbjct: 118 VLNKQLLSHERSHFPLLSTKRESSRMDHT--PIVGNLQSKRAFLERSGVQCIVMPCHISH 175
Query: 179 AWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQ 238
+WH ++S G S+PFLH+GECVA+ELK AKLKPLEAGS +RIGVLAT+ATL+AGFYQEKLQ
Sbjct: 176 SWHDEISRGXSVPFLHMGECVARELKNAKLKPLEAGSPLRIGVLATNATLTAGFYQEKLQ 235
Query: 239 NQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQ 298
+GFEVVLPDKATMEH +IP IEALN +DMEGARNLLRI +Q+LLVRAVN VI+ SD+M
Sbjct: 236 REGFEVVLPDKATMEHTVIPAIEALNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMH 295
Query: 299 GVLPKDDPLLKKCIDPMDALARSTVTWARSNKKLT 333
+LP+DDPLLKKC+DPMDALARST+ WA+S +K T
Sbjct: 296 DLLPRDDPLLKKCVDPMDALARSTIHWAQSVEKGT 330
>gi|224070839|ref|XP_002303258.1| predicted protein [Populus trichocarpa]
gi|222840690|gb|EEE78237.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/341 (59%), Positives = 261/341 (76%), Gaps = 19/341 (5%)
Query: 1 MFDGSISMSLQTPNCPPFFLSTVYINKTL--SRTRPILSAVVQSSSLLGQSHESGSLHES 58
MFDGS++M T + P L V ++ L SR +P+L+ + SS+L + ESG
Sbjct: 1 MFDGSLAMPFHTLH-PCHLLGHVNTHRALHKSRLQPVLA--IPPSSILLHTDESG----- 52
Query: 59 RKFPGSAAASLLRSK-SPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPF 117
KFP S S LR + S DSLL+QANT+GIIGG+SV+S LNFL KLV S+K+ ++C PF
Sbjct: 53 -KFPDSKKGSGLRGRDSSDSLLSQANTVGIIGGISVNSALNFLKKLVQGSSKEGKDCFPF 111
Query: 118 VVCNDPALNEELFHASVHSL-----KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVM 172
V+C+DP LN+EL +S ++ DH A+++NL++KR FLE++G +CIVM
Sbjct: 112 VLCSDPVLNKELLSHERNSCPCPRRHNEKSPSDH--SAIAENLQNKRVFLEKSGVQCIVM 169
Query: 173 PCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGF 232
PCHI H+WH +VS+GCS+PFLH+GECVA+ELKEAKLKPLEAGS +RIG+LA++ATL+AGF
Sbjct: 170 PCHILHSWHDEVSKGCSLPFLHMGECVARELKEAKLKPLEAGSPLRIGLLASNATLAAGF 229
Query: 233 YQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVII 292
YQEKLQN+GFEVVLPDKATMEH IIP IEAL+ DMEGA+NLLRI +Q+LLVRAVN VI+
Sbjct: 230 YQEKLQNEGFEVVLPDKATMEHTIIPAIEALDRNDMEGAQNLLRIALQVLLVRAVNTVIL 289
Query: 293 GSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNKKLT 333
S+EM+ VLP+DDPLLKKCIDPMDALARST+ WA++ K T
Sbjct: 290 ASEEMRDVLPEDDPLLKKCIDPMDALARSTIKWAQAADKGT 330
>gi|255553111|ref|XP_002517598.1| racemase and epimerase, acting on amino acids and derivatives,
putative [Ricinus communis]
gi|223543230|gb|EEF44762.1| racemase and epimerase, acting on amino acids and derivatives,
putative [Ricinus communis]
Length = 330
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/339 (59%), Positives = 252/339 (74%), Gaps = 15/339 (4%)
Query: 1 MFDGSISMSLQTPNCPPFFLSTVYINKTLSRTRPILSAVVQSSSLLGQSHESGSLHESRK 60
MFDGS+ MS + N P + V +KT + R L V SS++ + ESG +
Sbjct: 1 MFDGSLIMSFHSLNYPSHRFNNVNTHKTSYKARSNLVQAVPPSSVILHTDESG------R 54
Query: 61 FPGSAAASLLRSKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVC 120
F GS +S S S D LLNQANT+GIIGG SV+ LNFL KLV +S++D ++ PFV+C
Sbjct: 55 FRGSKKSSGSTSDSSDLLLNQANTVGIIGGTSVNCALNFLKKLVQWSSEDGKDSLPFVLC 114
Query: 121 NDPALNEEL------FHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPC 174
+DP LN+EL F S+ K + +LDH + +NLR KR FLE++GARCIVMPC
Sbjct: 115 SDPVLNKELLSHERDFFPSIGRQKEYS-KLDH--AQIVENLRSKRVFLERSGARCIVMPC 171
Query: 175 HISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQ 234
HISH+WH VS+GCSI FLH+GECVA+ELKEAKLKPLEAGS +RIGVLA +ATL+AGFYQ
Sbjct: 172 HISHSWHEQVSKGCSIHFLHMGECVARELKEAKLKPLEAGSPLRIGVLAANATLTAGFYQ 231
Query: 235 EKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGS 294
EKLQ++GFEVVLPDKATMEH IIP I ALN +DMEGARNLLRI +Q+LLVRAVN VI+ S
Sbjct: 232 EKLQSEGFEVVLPDKATMEHTIIPAIGALNRKDMEGARNLLRIALQVLLVRAVNTVILAS 291
Query: 295 DEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNKKLT 333
D+M+ +LP++DPLLKKCIDPMDAL R+T+ WA++ +K T
Sbjct: 292 DDMRDLLPQNDPLLKKCIDPMDALVRATIKWAKAAEKDT 330
>gi|225442873|ref|XP_002281753.1| PREDICTED: uncharacterized protein LOC100249822 [Vitis vinifera]
Length = 305
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/303 (64%), Positives = 239/303 (78%), Gaps = 10/303 (3%)
Query: 34 PILSAVVQSSSLLGQSHESGSLHESRKFPGSAAASLLRSKSPDSLLNQANTIGIIGGVSV 93
PIL AV SS+LL Q+ ESG+L ES+ GS AAS S S +NQA T+GIIGGVSV
Sbjct: 4 PIL-AVPPSSTLL-QTDESGNLPESKNSSGSDAAST-NSDSASLFINQATTVGIIGGVSV 60
Query: 94 SSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELF-----HASVHSLKSKTVQLDHIR 148
STLNFL KLV +S+KD + PFV+C+DP LN++L H + S K ++ ++DH
Sbjct: 61 DSTLNFLKKLVQWSSKDGGDSLPFVLCSDPVLNKQLLSHERSHFPLLSTKRESSRMDHT- 119
Query: 149 GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKL 208
+ NL+ KRAFLE++G +CIVMPCHISH+WH ++S G S+PFLH+GECVA+ELK AKL
Sbjct: 120 -PIVGNLQSKRAFLERSGVQCIVMPCHISHSWHDEISRGSSVPFLHMGECVARELKNAKL 178
Query: 209 KPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDM 268
KPLEAGS +RIGVLAT+ATL+AGFYQEKLQ +GFEVVLPDKATMEH +IP IEA N +DM
Sbjct: 179 KPLEAGSPLRIGVLATNATLTAGFYQEKLQREGFEVVLPDKATMEHTVIPAIEAFNRKDM 238
Query: 269 EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARS 328
EGARNLLRI +Q+LLVRAVN VI+ SD+M +LP+DDPLLKKC+DPMDALARST+ WA+S
Sbjct: 239 EGARNLLRIALQVLLVRAVNTVILASDDMHDLLPRDDPLLKKCVDPMDALARSTIHWAQS 298
Query: 329 NKK 331
+K
Sbjct: 299 VEK 301
>gi|255566957|ref|XP_002524461.1| racemase and epimerase, acting on amino acids and derivatives,
putative [Ricinus communis]
gi|223536249|gb|EEF37901.1| racemase and epimerase, acting on amino acids and derivatives,
putative [Ricinus communis]
Length = 302
Score = 367 bits (942), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 185/316 (58%), Positives = 233/316 (73%), Gaps = 23/316 (7%)
Query: 20 LSTVYINKTLSRTRPILSAVVQSSSLLGQSHESGSLHESRKFPGSAAASLLRSKSPDSLL 79
LS+ I+K + RP LS VQS+ K GS A KS +SLL
Sbjct: 3 LSSCCIDK---KRRPNLSVTVQSN----------------KNSGSGRAPTEYQKS-NSLL 42
Query: 80 NQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELF---HASVHS 136
+ANT+GIIGGVSV STL FL KLVW S+++ EE PFVVC+DP++ EL H S HS
Sbjct: 43 KRANTVGIIGGVSVLSTLIFLEKLVWMSSRNGEESIPFVVCSDPSITRELSSQSHVSCHS 102
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
SK +++ + +NLR KR FL+Q+GARCIVMPCH+SHAW+ ++SEGC +PF HVG
Sbjct: 103 FSSKNAEIELNADEIIENLRCKRKFLDQSGARCIVMPCHLSHAWYNEISEGCLLPFFHVG 162
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
+CVA EL+EA+LKPLEAGS VRIG+LA+ ATL+AGFYQEKLQ+QGFEVVLPDKAT +H++
Sbjct: 163 DCVASELREAELKPLEAGSEVRIGMLASSATLTAGFYQEKLQSQGFEVVLPDKATTDHIL 222
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
IP IEAL RD+EGA+NLLR+ IQ+LL+RA N VI+ SDE+QG+LP++DPL KKCIDPMD
Sbjct: 223 IPAIEALRRRDIEGAQNLLRVAIQILLMRAANIVILASDELQGLLPQNDPLQKKCIDPMD 282
Query: 317 ALARSTVTWARSNKKL 332
ALARS + WA+ K+
Sbjct: 283 ALARSIIKWAKHKAKV 298
>gi|297743412|emb|CBI36279.3| unnamed protein product [Vitis vinifera]
Length = 443
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 169/258 (65%), Positives = 210/258 (81%), Gaps = 7/258 (2%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELF-----HAS 133
L + T+GIIGGVSV STLNFL KLV +S+KD + PFV+C+DP LN++L H
Sbjct: 184 LMRTTTVGIIGGVSVDSTLNFLKKLVQWSSKDGGDSLPFVLCSDPVLNKQLLSHERSHFP 243
Query: 134 VHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
+ S K ++ ++DH + NL+ KRAFLE++G +CIVMPCHISH+WH ++S G S+PFL
Sbjct: 244 LLSTKRESSRMDHT--PIVGNLQSKRAFLERSGVQCIVMPCHISHSWHDEISRGSSVPFL 301
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
H+GECVA+ELK AKLKPLEAGS +RIGVLAT+ATL+AGFYQEKLQ +GFEVVLPDKATME
Sbjct: 302 HMGECVARELKNAKLKPLEAGSPLRIGVLATNATLTAGFYQEKLQREGFEVVLPDKATME 361
Query: 254 HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCID 313
H +IP IEA N +DMEGARNLLRI +Q+LLVRAVN VI+ SD+M +LP+DDPLLKKC+D
Sbjct: 362 HTVIPAIEAFNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMHDLLPRDDPLLKKCVD 421
Query: 314 PMDALARSTVTWARSNKK 331
PMDALARST+ WA+S +K
Sbjct: 422 PMDALARSTIHWAQSVEK 439
>gi|449469004|ref|XP_004152211.1| PREDICTED: uncharacterized protein LOC101217164 [Cucumis sativus]
gi|449532820|ref|XP_004173376.1| PREDICTED: uncharacterized protein LOC101225587 [Cucumis sativus]
Length = 327
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/291 (61%), Positives = 224/291 (76%), Gaps = 9/291 (3%)
Query: 44 SLLGQSHESGSLHESRKFPGSAAASLLRSKSPDSLLNQANTIGIIGGVSVSSTLNFLGKL 103
S L + ES ES+K G ++ S LL+Q+NT+GI+GG SV+ST+NFLGKL
Sbjct: 36 STLLHTDESEHFPESKKTSGFSSVLKTNKDSTGILLSQSNTVGILGGSSVNSTVNFLGKL 95
Query: 104 VWYSAKDAEECP--PFVVCNDPALNEEL--FHASVH---SLKSKTVQLDHIRGAVSQNLR 156
V +S KD E PFV+C+DP L+ EL F S H + KS+ + LD V ++L+
Sbjct: 96 VKWSTKDGESQSGLPFVLCSDPTLSNELQVFDKSSHPVLNYKSEDLGLDS--ELVVESLK 153
Query: 157 HKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSG 216
KR FLE +GARCIVMPCHISH W+ DVS+GC + FLH+ +CVA+ELKEAKLKPLEAGS
Sbjct: 154 SKRTFLENSGARCIVMPCHISHLWYEDVSKGCPVTFLHMADCVARELKEAKLKPLEAGSP 213
Query: 217 VRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLR 276
+RIGVLAT+A LSAG+YQEKLQN+GFEVVLPDKATMEH +IP IEALN +D+EGARNLLR
Sbjct: 214 LRIGVLATNAILSAGYYQEKLQNEGFEVVLPDKATMEHTVIPAIEALNRKDIEGARNLLR 273
Query: 277 IGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWAR 327
I +Q+LLVRAVN+VI+ SD+++ +LP DDPLL++CIDPMDALARST+ WA+
Sbjct: 274 IALQVLLVRAVNSVILASDDIKDILPLDDPLLRRCIDPMDALARSTINWAQ 324
>gi|87162592|gb|ABD28387.1| Asp/Glu racemase [Medicago truncatula]
Length = 321
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 233/323 (72%), Gaps = 25/323 (7%)
Query: 8 MSLQTPNCPPFFLSTVYINKTLSRTRPILSAVVQSSSLLGQSHESGSLHESRKFPGSAAA 67
+S+ PN P +L SR+ +LS SS++ + ESG S+ GS
Sbjct: 17 VSILNPNLNPRYLCK-------SRSWKVLST--PPSSVILNADESGKF--SKNLVGS--- 62
Query: 68 SLLRSKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE 127
+R+ S Q T+GIIGG+SV +TLNFL KLV S++D + PF++C+DP LN+
Sbjct: 63 --VRNDSVSPFGYQGTTVGIIGGMSVDATLNFLRKLVELSSQDGQNPIPFLLCSDPILNK 120
Query: 128 EL--FHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVS 185
EL + S+ S K + Q + Q+LR+KR FLE +GARCIVMPC++SH+W+ VS
Sbjct: 121 ELLSYERSLESFKVDSSQ-------IVQSLRNKRVFLENSGARCIVMPCNVSHSWYEQVS 173
Query: 186 EGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVV 245
GCS+PFLH+ ECVAKELKEAKLKPLEAGS +RIGVLAT+ATL+AGFY+EKLQN+GFEV+
Sbjct: 174 IGCSVPFLHMAECVAKELKEAKLKPLEAGSPLRIGVLATNATLAAGFYKEKLQNEGFEVI 233
Query: 246 LPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
LPD+ATMEH +IP EAL+ +DMEGA NLLRI +Q+LLVRAVN VI+ SDEM+ VLP DD
Sbjct: 234 LPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDD 293
Query: 306 PLLKKCIDPMDALARSTVTWARS 328
PLLKKCIDPMDALARST+ W RS
Sbjct: 294 PLLKKCIDPMDALARSTIKWVRS 316
>gi|357455147|ref|XP_003597854.1| Aspartate racemase [Medicago truncatula]
gi|355486902|gb|AES68105.1| Aspartate racemase [Medicago truncatula]
Length = 318
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 233/323 (72%), Gaps = 25/323 (7%)
Query: 8 MSLQTPNCPPFFLSTVYINKTLSRTRPILSAVVQSSSLLGQSHESGSLHESRKFPGSAAA 67
+S+ PN P +L SR+ +LS SS++ + ESG S+ GS
Sbjct: 14 VSILNPNLNPRYLCK-------SRSWKVLST--PPSSVILNADESGKF--SKNLVGS--- 59
Query: 68 SLLRSKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE 127
+R+ S Q T+GIIGG+SV +TLNFL KLV S++D + PF++C+DP LN+
Sbjct: 60 --VRNDSVSPFGYQGTTVGIIGGMSVDATLNFLRKLVELSSQDGQNPIPFLLCSDPILNK 117
Query: 128 EL--FHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVS 185
EL + S+ S K + Q + Q+LR+KR FLE +GARCIVMPC++SH+W+ VS
Sbjct: 118 ELLSYERSLESFKVDSSQ-------IVQSLRNKRVFLENSGARCIVMPCNVSHSWYEQVS 170
Query: 186 EGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVV 245
GCS+PFLH+ ECVAKELKEAKLKPLEAGS +RIGVLAT+ATL+AGFY+EKLQN+GFEV+
Sbjct: 171 IGCSVPFLHMAECVAKELKEAKLKPLEAGSPLRIGVLATNATLAAGFYKEKLQNEGFEVI 230
Query: 246 LPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
LPD+ATMEH +IP EAL+ +DMEGA NLLRI +Q+LLVRAVN VI+ SDEM+ VLP DD
Sbjct: 231 LPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDD 290
Query: 306 PLLKKCIDPMDALARSTVTWARS 328
PLLKKCIDPMDALARST+ W RS
Sbjct: 291 PLLKKCIDPMDALARSTIKWVRS 313
>gi|297844444|ref|XP_002890103.1| aspartate-glutamate racemase family [Arabidopsis lyrata subsp.
lyrata]
gi|297335945|gb|EFH66362.1| aspartate-glutamate racemase family [Arabidopsis lyrata subsp.
lyrata]
Length = 330
Score = 347 bits (889), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 182/331 (54%), Positives = 234/331 (70%), Gaps = 14/331 (4%)
Query: 8 MSLQTPNCPPFFLSTV-YINKTLSRTRPILSAVVQSSSLLGQSHESGSLHESRK--FPGS 64
M LQ N P L+ V Y ++ + R + SS+L ES L + +K P
Sbjct: 1 MYLQIFNNPCHGLAHVCYSSRVSCKVRLSRVLAMPPSSILLHMDESNDLPKPKKGFCPSE 60
Query: 65 AAASLLRSKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPA 124
+ + L S S DSLL QANT+GIIGGVS STL F+ KLV +S+KD + PFV+C+DPA
Sbjct: 61 DSRNSLNSLSADSLLRQANTVGIIGGVSTDSTLKFVKKLVDWSSKDGKSSLPFVLCSDPA 120
Query: 125 LNEEL-------FHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHIS 177
LN+EL + + H +S V I G NLR+KR +LE+ GA+ I+MPCHI+
Sbjct: 121 LNKELLLYEENSYPSLYHRAESTPVDPKLIVG----NLRNKRRYLEKCGAKLILMPCHIA 176
Query: 178 HAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKL 237
H W+ +V EG S+P LH+GEC+AKEL+EAK+KPLEAG+ +R+GV+AT ATLSAGFYQEKL
Sbjct: 177 HIWYEEVCEGSSVPLLHMGECIAKELQEAKMKPLEAGNPLRVGVMATSATLSAGFYQEKL 236
Query: 238 QNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
Q+ GFE VLPDKATMEH +IP+IEA+ DMEGARNLLRI +Q+LLV+AVN V++GSDEM
Sbjct: 237 QSNGFEAVLPDKATMEHTVIPSIEAMKREDMEGARNLLRIALQVLLVQAVNVVMLGSDEM 296
Query: 298 QGVLPKDDPLLKKCIDPMDALARSTVTWARS 328
+ +LP DDPLLKKC+DPMDALARS + WA +
Sbjct: 297 RDLLPGDDPLLKKCVDPMDALARSAIKWAEN 327
>gi|15218160|ref|NP_172993.1| aspartate-glutamate racemase-like protein [Arabidopsis thaliana]
gi|5103839|gb|AAD39669.1|AC007591_34 Is a member of the PF|01177 Aspartate-glutamate racemase family.
EST gb|T43554 comes from this gene [Arabidopsis
thaliana]
gi|26983862|gb|AAN86183.1| unknown protein [Arabidopsis thaliana]
gi|332191198|gb|AEE29319.1| aspartate-glutamate racemase-like protein [Arabidopsis thaliana]
Length = 330
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 176/327 (53%), Positives = 229/327 (70%), Gaps = 6/327 (1%)
Query: 8 MSLQTPNCPPFFLSTV-YINKTLSRTRPILSAVVQSSSLLGQSHESGSLHESRK--FPGS 64
M LQ N P L+ + Y ++ R R + SS+L ES L + +K
Sbjct: 1 MYLQIFNNPSHGLAHLCYSSRVSCRVRLSRVLAMPPSSVLLHMDESNDLPKPKKGFCLSE 60
Query: 65 AAASLLRSKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPA 124
+ + L S DSLL QANT+GIIGGVS STL F+ KLV +S+ D + PFV+C+DPA
Sbjct: 61 DSRNSLNSLPADSLLRQANTVGIIGGVSTDSTLKFVKKLVDWSSNDGKSSLPFVLCSDPA 120
Query: 125 LNEELF---HASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWH 181
LN+EL S SL + + +NLR+KR +LE+ GA+ I+MPCHI+H W+
Sbjct: 121 LNKELLLYEENSYPSLYHREESTPVDPKLIVENLRNKRRYLERCGAKLILMPCHIAHIWY 180
Query: 182 GDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQG 241
+V EG +P LH+GEC+AKEL+EAK+KPLEAG+ +R+GV+AT ATLSAGFYQEKLQ+ G
Sbjct: 181 EEVCEGSLVPLLHMGECIAKELQEAKMKPLEAGNPLRVGVMATSATLSAGFYQEKLQSNG 240
Query: 242 FEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL 301
FE VLPDKATMEH +IP+IEA+ +DMEGARNLLRI +Q+LLV+AVN V++GSDEM+ +L
Sbjct: 241 FEAVLPDKATMEHTVIPSIEAMKRKDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLL 300
Query: 302 PKDDPLLKKCIDPMDALARSTVTWARS 328
P DDPLLKKC+DPMDALARS + WA +
Sbjct: 301 PGDDPLLKKCVDPMDALARSAIKWAEN 327
>gi|110740155|dbj|BAF01976.1| hypothetical protein [Arabidopsis thaliana]
Length = 330
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 175/327 (53%), Positives = 228/327 (69%), Gaps = 6/327 (1%)
Query: 8 MSLQTPNCPPFFLSTV-YINKTLSRTRPILSAVVQSSSLLGQSHESGSLHESRK--FPGS 64
M LQ N P L+ + Y ++ R R + SS+L ES L + +K
Sbjct: 1 MYLQIFNNPSHGLAHLCYSSRVSCRVRLSRVLAMPPSSVLLHMDESNDLPKPKKGFCLSE 60
Query: 65 AAASLLRSKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPA 124
+ + L S DSLL QANT+GIIGGVS STL F+ KLV +S+ D + PFV+C+DPA
Sbjct: 61 DSRNSLNSLPADSLLRQANTVGIIGGVSTDSTLKFVKKLVDWSSNDGKSSLPFVLCSDPA 120
Query: 125 LNEELF---HASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWH 181
LN+EL S SL + + +NLR+KR +LE+ GA+ I+MPCHI+H W+
Sbjct: 121 LNKELLLYEENSYPSLYHREESTPVDPKLIVENLRNKRRYLERCGAKLILMPCHIAHIWY 180
Query: 182 GDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQG 241
+V EG +P LH+GEC+AKEL+EAK+KPLEAG+ +R+GV+AT ATLSAGFYQEKLQ+ G
Sbjct: 181 EEVCEGSLVPLLHMGECIAKELQEAKMKPLEAGNPLRVGVMATSATLSAGFYQEKLQSNG 240
Query: 242 FEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL 301
FE V PDKATMEH +IP+IEA+ +DMEGARNLLRI +Q+LLV+AVN V++GSDEM+ +L
Sbjct: 241 FEAVPPDKATMEHTVIPSIEAMKRKDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLL 300
Query: 302 PKDDPLLKKCIDPMDALARSTVTWARS 328
P DDPLLKKC+DPMDALARS + WA +
Sbjct: 301 PGDDPLLKKCVDPMDALARSAIKWAEN 327
>gi|357477995|ref|XP_003609283.1| hypothetical protein MTR_4g114000 [Medicago truncatula]
gi|355510338|gb|AES91480.1| hypothetical protein MTR_4g114000 [Medicago truncatula]
Length = 401
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 173/338 (51%), Positives = 234/338 (69%), Gaps = 15/338 (4%)
Query: 1 MFDGSISMSLQTPNCPPFFLSTVYINKTLSRTRPILSAVVQSSSLLGQSHESGSLHESRK 60
M + + MS+QT N P F + N+T ++ R S SS L + ESG+ E
Sbjct: 69 MLERGMLMSIQTLNHPQFLFGVAFRNRTQTQYRTRSSNSSISSVFL--TDESGNYEE--- 123
Query: 61 FPGSAAASLLR---SKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPF 117
PG+ SL+R S + L+Q NTIG+IGGVSV STL FL KL +S+++ +ECPPF
Sbjct: 124 -PGNGT-SLMRGHISSASCIKLSQQNTIGVIGGVSVLSTLVFLEKLACWSSRNGKECPPF 181
Query: 118 VVCNDPALNEELFHASVHSLKSKTVQLDHI---RGAVSQNLRHKRAFLEQAGARCIVMPC 174
VVC+DP L++ L + S S ++DHI + + QNLRHK L+Q+GAR + +PC
Sbjct: 182 VVCSDPVLSKAL--SLRGSFPSTRTRIDHIELNQELMIQNLRHKINVLQQSGARGLALPC 239
Query: 175 HISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQ 234
H+SHAWH ++S+ S+PFLHVG+CVA ELK AK+KP+ A S VRIG+L TD++ +Y+
Sbjct: 240 HLSHAWHKEISKDSSLPFLHVGDCVAMELKNAKMKPIHATSTVRIGLLTTDSSFVVCYYK 299
Query: 235 EKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGS 294
EKLQ+QGFEVVL DKAT EH+++P ++AL +D+EGARNLLRI I +LLVR VN VI+ S
Sbjct: 300 EKLQSQGFEVVLLDKATEEHILVPAVDALQRKDIEGARNLLRIAIHVLLVRGVNVVILAS 359
Query: 295 DEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNKKL 332
D++ G+LP +DPLLKKCIDPMDALARS + WA + K+
Sbjct: 360 DDLLGILPHNDPLLKKCIDPMDALARSIINWAETTAKV 397
>gi|356565195|ref|XP_003550829.1| PREDICTED: uncharacterized protein LOC100792806 [Glycine max]
Length = 306
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 164/320 (51%), Positives = 221/320 (69%), Gaps = 20/320 (6%)
Query: 14 NCPPFFLSTVYINKTLSRTRPILSAVVQSSSLLGQSHESGSLHESRKFPGSAAASLLRSK 73
N PPF + +T +R R G+++ S +L S G+ A +
Sbjct: 2 NHPPFLTGDAFRKRTQTRCR-------------GRANSSTALQLSSDESGNYA------E 42
Query: 74 SPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL-FHA 132
SLL+Q NTIG+IGGVS+ STL FL KL + +++ +ECPPFVV +DPAL++ L
Sbjct: 43 PCTSLLSQPNTIGVIGGVSLLSTLIFLEKLACWGSRNGKECPPFVVSSDPALSKMLSLRG 102
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ S +++ ++ + V +NLR KR FL+Q+GAR + MPCH+SHAWH ++SE S+PF
Sbjct: 103 PLPSARTRFDRIKLNQDLVIENLRCKRNFLQQSGARGLAMPCHLSHAWHSEISEDSSLPF 162
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
LHVG+CVA ELK AKLKP+ A VRIG+L TD+ A +YQE+LQ+QGFEVVL DKAT
Sbjct: 163 LHVGDCVAMELKNAKLKPIHAAGIVRIGLLTTDSNFVASYYQERLQSQGFEVVLLDKATE 222
Query: 253 EHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCI 312
EHV++P +EAL +D+EGARNLLRI I +LLVRAVN V++ SD++ GVLP +DPLL+KCI
Sbjct: 223 EHVLVPAMEALYRKDIEGARNLLRIAIHVLLVRAVNLVLLASDDLLGVLPHNDPLLRKCI 282
Query: 313 DPMDALARSTVTWARSNKKL 332
DPMDALARST+ WA + K+
Sbjct: 283 DPMDALARSTIHWAETMVKV 302
>gi|356557255|ref|XP_003546933.1| PREDICTED: probable amino-acid racemase-like [Glycine max]
Length = 363
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/306 (55%), Positives = 221/306 (72%), Gaps = 9/306 (2%)
Query: 27 KTLSRTRPILSAVVQSSSLLGQSHESGSLHESRKFPGSAAASLLRSKSPDSLLNQANTIG 86
+ LS+TR SSL+ + ESG E K GS AS +P + Q + +G
Sbjct: 60 RYLSKTRWYQVQATPPSSLILNADESGKFSE--KLHGSNLAS--GRGAP--FVTQGSAVG 113
Query: 87 IIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQLDH 146
IIGGVS+ +TL FL KLV +S++D PFV+C+DP L++EL S T + ++
Sbjct: 114 IIGGVSMDATLKFLRKLVEFSSEDGANSIPFVLCSDPLLSKELLSYERSIFASSTSKAEN 173
Query: 147 IR---GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
++ + Q LR+KR FLE G C VMPC++SH+W+ VSEGCS+P LH+ ECVAKEL
Sbjct: 174 LKQDSSPIVQTLRNKRVFLENFGTSCTVMPCNVSHSWYEQVSEGCSVPVLHMAECVAKEL 233
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
KEAKLKPLEAGS +RIGVLAT+ATL+AG Y+EKLQN+GF+VVLPD+ATMEH +IP +EAL
Sbjct: 234 KEAKLKPLEAGSPLRIGVLATNATLAAGVYKEKLQNEGFDVVLPDRATMEHTVIPAMEAL 293
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTV 323
N +DMEGA NLLRI +Q+LLVRA N+VI+ SD+M+ +LP DDPLLKKCIDPMDALARST+
Sbjct: 294 NRKDMEGACNLLRIALQVLLVRAANSVILASDDMRDLLPPDDPLLKKCIDPMDALARSTI 353
Query: 324 TWARSN 329
W +S+
Sbjct: 354 KWVKSS 359
>gi|242053261|ref|XP_002455776.1| hypothetical protein SORBIDRAFT_03g024890 [Sorghum bicolor]
gi|241927751|gb|EES00896.1| hypothetical protein SORBIDRAFT_03g024890 [Sorghum bicolor]
Length = 326
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/266 (51%), Positives = 185/266 (69%), Gaps = 9/266 (3%)
Query: 65 AAASLLRSKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPA 124
A++S RS + + G++G S SS+L FL K V +S + EE PPF++CNDP
Sbjct: 69 ASSSASRSGPYIGTCHPSGAAGVMGASS-SSSLRFLEKFVSWSTRGGEEAPPFIICNDPL 127
Query: 125 LNEELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDV 184
+ +EL + S ++ L IR KR FLEQ+GA CIVMPC HAWH ++
Sbjct: 128 VKKELLPSGTQSTSGCSIALGKIR--------QKRLFLEQSGACCIVMPCQFLHAWHHEI 179
Query: 185 SEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEV 244
S+GCS+PFLHVG+CV KELK A LKP+E GS VR+GVL+TD TL+ Y +KL++QGFEV
Sbjct: 180 SQGCSVPFLHVGDCVVKELKAANLKPVEYGSNVRVGVLSTDNTLATNCYLDKLESQGFEV 239
Query: 245 VLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD 304
+ PDKA+ME ++P+++A DMEGARNLLR+ +Q+LLVRAVN +I+ SD++ G+LP D
Sbjct: 240 LCPDKASMERTVLPSVDAFRKGDMEGARNLLRVSLQVLLVRAVNKIILASDDLVGILPDD 299
Query: 305 DPLLKKCIDPMDALARSTVTWARSNK 330
DPLLKKCIDP+DAL R + AR+ +
Sbjct: 300 DPLLKKCIDPLDALVREAIVCARAPR 325
>gi|212721920|ref|NP_001132219.1| uncharacterized protein LOC100193653 [Zea mays]
gi|195642844|gb|ACG40890.1| asp/Glu racemase [Zea mays]
Length = 328
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 134/266 (50%), Positives = 181/266 (68%), Gaps = 7/266 (2%)
Query: 65 AAASLLRSKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPA 124
A++S RS + + +G++G S SS L FL K V +S EE PPF++CNDP
Sbjct: 69 ASSSASRSGPYIGTCHPSGAVGVMGASS-SSCLRFLEKFVSWSTGGGEEAPPFIICNDPL 127
Query: 125 LNEELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDV 184
+ +EL + S + + LR KR FLEQ+GA CIVMPC HAWH ++
Sbjct: 128 VKKELLPSGTQSTSGCSASI------ALGKLRQKRLFLEQSGACCIVMPCQFLHAWHDEI 181
Query: 185 SEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEV 244
S+GCS+PF+HVG+CV KELK A LKP+E GS VR+GVL TD L+ Y +KL++QGFEV
Sbjct: 182 SQGCSVPFIHVGDCVVKELKAANLKPVEYGSNVRVGVLFTDNKLATNCYLDKLESQGFEV 241
Query: 245 VLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD 304
+ PDKA+ME ++P++ A DMEGARNLLR+ +Q+LLVRAVN++I+ SD++ G+LP D
Sbjct: 242 LCPDKASMERTVLPSVAAFGKGDMEGARNLLRVSLQVLLVRAVNSIILASDDLVGILPDD 301
Query: 305 DPLLKKCIDPMDALARSTVTWARSNK 330
DPLLKKCIDP+DAL R + AR+ +
Sbjct: 302 DPLLKKCIDPLDALVREAIACARAPR 327
>gi|194693798|gb|ACF80983.1| unknown [Zea mays]
gi|413948266|gb|AFW80915.1| asp/Glu racemase isoform 1 [Zea mays]
gi|413948267|gb|AFW80916.1| asp/Glu racemase isoform 2 [Zea mays]
Length = 328
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 134/264 (50%), Positives = 180/264 (68%), Gaps = 7/264 (2%)
Query: 65 AAASLLRSKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPA 124
A++S RS + + +G++G S SS L FL K V +S EE PPF++CNDP
Sbjct: 69 ASSSASRSGPYIGTCHPSGAVGVMGASS-SSCLRFLEKFVSWSTGGGEEAPPFIICNDPL 127
Query: 125 LNEELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDV 184
+ +EL + S + + LR KR FLEQ+GA CIVMPC HAWH ++
Sbjct: 128 VKKELLPSGTQSTSGCSASI------ALGKLRQKRLFLEQSGACCIVMPCQFLHAWHDEI 181
Query: 185 SEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEV 244
S+GCS+PF+HVG+CV KELK A LKP+E GS VR+GVL TD L+ Y +KL++QGFEV
Sbjct: 182 SQGCSVPFIHVGDCVVKELKAANLKPVEYGSNVRVGVLFTDNKLATNCYLDKLESQGFEV 241
Query: 245 VLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD 304
+ PDKA+ME ++P++ A DMEGARNLLR+ +Q+LLVRAVN++I+ SD++ G+LP D
Sbjct: 242 LCPDKASMERTVLPSVAAFGKGDMEGARNLLRVSLQVLLVRAVNSIILASDDLVGILPDD 301
Query: 305 DPLLKKCIDPMDALARSTVTWARS 328
DPLLKKCIDP+DAL R + AR+
Sbjct: 302 DPLLKKCIDPLDALVREAIACARA 325
>gi|357135211|ref|XP_003569205.1| PREDICTED: uncharacterized protein LOC100831643 [Brachypodium
distachyon]
Length = 325
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 144/272 (52%), Positives = 189/272 (69%), Gaps = 11/272 (4%)
Query: 57 ESRKFPGSAAASLLRSKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPP 116
+S+ GS++AS RS ++ + + TIG++G S +S+L FL KLV++S +D EE PP
Sbjct: 62 DSKYLDGSSSAS--RSGPYNATSHLSGTIGVMG-TSAASSLRFLEKLVYWSTRDGEETPP 118
Query: 117 FVVCNDPALNEELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHI 176
F++ NDP + +ELF + QL LRHKR LEQ+GA CIVMPC +
Sbjct: 119 FIISNDPLVKKELF--------CENSQLSSDCNPALGKLRHKRIVLEQSGASCIVMPCQL 170
Query: 177 SHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEK 236
HAWH +VS+GCS+PFL VG CV KELK A KP+E GS VR+G+LATD ++ Y +K
Sbjct: 171 LHAWHDEVSQGCSVPFLDVGACVLKELKAASFKPVEYGSNVRVGILATDNIMTTNCYLDK 230
Query: 237 LQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDE 296
L++QGFEVV PDKA+MEHV++P + A DMEGARNLL+I +QLLLVRA N +I+ SD+
Sbjct: 231 LESQGFEVVCPDKASMEHVVLPAVSAFRKGDMEGARNLLQIALQLLLVRAANVIILASDD 290
Query: 297 MQGVLPKDDPLLKKCIDPMDALARSTVTWARS 328
+LP DDPLLKKCIDPMDAL R T+ AR+
Sbjct: 291 FVDILPDDDPLLKKCIDPMDALVRETIVCART 322
>gi|218188447|gb|EEC70874.1| hypothetical protein OsI_02398 [Oryza sativa Indica Group]
Length = 329
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/266 (51%), Positives = 185/266 (69%), Gaps = 8/266 (3%)
Query: 65 AAASLLRSKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPA 124
A++S R+ + + + TIG++G +S SS+L FL KLV +S +D EE PPF+VCNDP
Sbjct: 69 ASSSASRTGQYSATTHLSGTIGVMG-ISASSSLRFLQKLVHWSTRDGEEAPPFLVCNDPL 127
Query: 125 LNEELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDV 184
L +EL + S+ Q LR +R LE++G CI MPC+ HA+H ++
Sbjct: 128 LKKEL-------MSSQNSQRPSDCNTALGKLRLRRLLLEKSGVCCIAMPCNTLHAYHDEI 180
Query: 185 SEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEV 244
S+GCS+P LH+G+CV KELK A LKP+E GS V +G+L TD TL+A Y KL++QGFEV
Sbjct: 181 SQGCSVPSLHIGDCVVKELKSANLKPVEYGSNVCVGILCTDNTLNAKCYLNKLESQGFEV 240
Query: 245 VLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD 304
+LPDKA++EH ++P I A DMEGARNLLRI +Q++ VRAVN +I+ SD+ G+LP D
Sbjct: 241 LLPDKASLEHTVLPAIGAFRRGDMEGARNLLRISLQVMFVRAVNTIILASDDFVGILPDD 300
Query: 305 DPLLKKCIDPMDALARSTVTWARSNK 330
DPLLKKCIDPMDAL R T+ AR+++
Sbjct: 301 DPLLKKCIDPMDALVRETIMCARTDR 326
>gi|115437536|ref|NP_001043319.1| Os01g0555200 [Oryza sativa Japonica Group]
gi|57900000|dbj|BAD87936.1| unknown protein [Oryza sativa Japonica Group]
gi|113532850|dbj|BAF05233.1| Os01g0555200 [Oryza sativa Japonica Group]
gi|222618665|gb|EEE54797.1| hypothetical protein OsJ_02201 [Oryza sativa Japonica Group]
Length = 329
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/265 (51%), Positives = 184/265 (69%), Gaps = 8/265 (3%)
Query: 65 AAASLLRSKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPA 124
A++S R+ + + + TIG++G +S SS+L FL KLV +S +D EE PPF+VCNDP
Sbjct: 69 ASSSASRTGQYSATTHLSGTIGVMG-ISASSSLRFLQKLVHWSTRDGEEAPPFLVCNDPL 127
Query: 125 LNEELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDV 184
L +EL + S+ Q LR +R LE++G CI MPC+ HA+H ++
Sbjct: 128 LKKEL-------MSSQNSQRPSDCNTALGKLRLRRLLLEKSGVCCIAMPCNTLHAYHDEI 180
Query: 185 SEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEV 244
S+GCS+P LH+G+CV KELK A LKP+E GS V +G+L TD TL+A Y KL++QGFEV
Sbjct: 181 SQGCSVPSLHIGDCVVKELKSANLKPVEYGSNVCVGILCTDNTLNAKCYLNKLESQGFEV 240
Query: 245 VLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD 304
+LPDKA++EH ++P I A DMEGARNLLRI +Q++ VRAVN +I+ SD+ G+LP D
Sbjct: 241 LLPDKASLEHTVLPAIGAFRRGDMEGARNLLRISLQVMFVRAVNTIILASDDFVGILPDD 300
Query: 305 DPLLKKCIDPMDALARSTVTWARSN 329
DPLLKKCIDPMDAL R T+ AR++
Sbjct: 301 DPLLKKCIDPMDALVRETIMCARTD 325
>gi|215695275|dbj|BAG90466.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 238
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/240 (54%), Positives = 170/240 (70%), Gaps = 7/240 (2%)
Query: 90 GVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQLDHIRG 149
G+S SS+L FL KLV +S +D EE PPF+VCNDP L +EL + S+ Q
Sbjct: 2 GISASSSLRFLQKLVHWSTRDGEEAPPFLVCNDPLLKKEL-------MSSQNSQRPSDCN 54
Query: 150 AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLK 209
LR +R LE++G CI MPC+ HA+H ++S+GCS+P LH+G+CV KELK A LK
Sbjct: 55 TALGKLRLRRLLLEKSGVCCIAMPCNTLHAYHDEISQGCSVPSLHIGDCVVKELKSANLK 114
Query: 210 PLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDME 269
P+E GS V +G+L TD TL+A Y KL++QGFEV+LPDKA++EH ++P I A DME
Sbjct: 115 PVEYGSNVCVGILCTDNTLNAKCYLNKLESQGFEVLLPDKASLEHTVLPAIGAFRRGDME 174
Query: 270 GARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSN 329
GARNLLRI +Q++ VRAVN +I+ SD+ G+LP DDPLLKKCIDPMDAL R T+ AR++
Sbjct: 175 GARNLLRISLQVMFVRAVNTIILASDDFVGILPDDDPLLKKCIDPMDALVRETIMCARTD 234
>gi|297738924|emb|CBI28169.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 116/157 (73%), Positives = 137/157 (87%)
Query: 172 MPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAG 231
MPCH++HAWH +VS+GC +PFLHVGECVA ELK+AK KPLEAGS VRIGVLA TL AG
Sbjct: 1 MPCHLAHAWHSEVSKGCPLPFLHVGECVASELKKAKFKPLEAGSNVRIGVLAPGETLMAG 60
Query: 232 FYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVI 291
FYQEKLQ+QGFEVVLPD ATMEH+++P IEAL+ +DMEGARNLLRI + + L+RAVN VI
Sbjct: 61 FYQEKLQSQGFEVVLPDMATMEHIVVPAIEALHRKDMEGARNLLRIAVHIFLMRAVNIVI 120
Query: 292 IGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARS 328
+ SDEMQ +LP+DDPL KKCI+PMDALARST+ WA+S
Sbjct: 121 LASDEMQDLLPRDDPLSKKCINPMDALARSTIGWAKS 157
>gi|302806146|ref|XP_002984823.1| hypothetical protein SELMODRAFT_121154 [Selaginella moellendorffii]
gi|300147409|gb|EFJ14073.1| hypothetical protein SELMODRAFT_121154 [Selaginella moellendorffii]
Length = 250
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 150/262 (57%), Gaps = 30/262 (11%)
Query: 70 LRSKSPDSLLNQANTIGIIGGVSVS-STLNFLGKLVWYSAKDAEECP-PFVVCNDPALNE 127
++S + LL+ +++G++GG S TL FL +L +A + + P V+C DP +
Sbjct: 1 MQSLASCQLLHYPHSVGVLGGGFHSVPTLQFLKRLREATAAEGDLLRIPLVLCGDPNASH 60
Query: 128 ELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEG 187
L GA+ Q +R FLE AGA+CI +PC S W + G
Sbjct: 61 HL-------------------GALIQ----QREFLEDAGAKCIALPCPSSLRWFTCLDSG 97
Query: 188 CSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
S L+V + + +EL A+L+PL+ + RIG+L FYQEKL+ +GFEVVLP
Sbjct: 98 SSAKLLNVVDSLVEELHRAELRPLQGAARPRIGILTCQGL---EFYQEKLEQEGFEVVLP 154
Query: 248 DKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPL 307
DKA+ + +I+P + AL RD +G R+L+R+ I +LLV AVN VI D++ L DDPL
Sbjct: 155 DKASKDRLIVPAMAALERRDFQGHRSLIRVAIHMLLVNAVNRVI--GDDLTAALWADDPL 212
Query: 308 LKKCIDPMDALARSTVTWARSN 329
L +CIDP ++LA++TV WA+
Sbjct: 213 LLQCIDPANSLAKATVNWAKQQ 234
>gi|351722949|ref|NP_001235214.1| uncharacterized protein LOC100306705 [Glycine max]
gi|255629325|gb|ACU15007.1| unknown [Glycine max]
Length = 229
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 88/195 (45%), Positives = 119/195 (61%), Gaps = 9/195 (4%)
Query: 27 KTLSRTRPILSAVVQSSSLLGQSHESGSLHESRKFPGSAAASLLRSKSPDSLLNQANTIG 86
+ LS+TR L SS++ + SG E P L S + Q + +G
Sbjct: 26 RYLSKTRRCLVQATPPSSVILNADGSGKFSEKLHVPN------LDSGRGAPFVIQRSAVG 79
Query: 87 IIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQLDH 146
IIGGVSV +TL FL KLV +S++D PFV+C+DP L++EL S T + ++
Sbjct: 80 IIGGVSVDATLKFLRKLVEFSSQDGVNSTPFVLCSDPLLSKELLSYERSYFVSSTSKAEN 139
Query: 147 IR---GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
++ + Q LR+KR FLE +G CIVMPC++SH+W+ VSEGCS+P H+ ECVAKEL
Sbjct: 140 LKLDSSPIVQTLRNKRVFLENSGTSCIVMPCNVSHSWYEQVSEGCSVPVFHMAECVAKEL 199
Query: 204 KEAKLKPLEAGSGVR 218
KEAKLKPLEAGS +R
Sbjct: 200 KEAKLKPLEAGSPLR 214
>gi|388520181|gb|AFK48152.1| unknown [Lotus japonicus]
Length = 84
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 71/83 (85%)
Query: 252 MEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC 311
MEH ++P IEAL+ +DMEGA NL RI +Q+LLVRAVN+VI+ SD+M+ +LPKDDPLLKKC
Sbjct: 1 MEHTVMPAIEALDRKDMEGACNLFRIALQVLLVRAVNSVILASDDMRDLLPKDDPLLKKC 60
Query: 312 IDPMDALARSTVTWARSNKKLTL 334
IDPMDALA ST+ WARS++ TL
Sbjct: 61 IDPMDALAWSTIKWARSSEDNTL 83
>gi|422022845|ref|ZP_16369351.1| aspartate racemase [Providencia sneebia DSM 19967]
gi|414094575|gb|EKT56239.1| aspartate racemase [Providencia sneebia DSM 19967]
Length = 242
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 120/246 (48%), Gaps = 23/246 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IG++GG+ ++T++ K V Y+ A +E P ++ + P + + H +
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTYTVANKDQEHIPLIISSIPDIPDRTEALLNHGKSPLPLM 64
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
D+++ LE AGA CIV+PC+ +H W ++ E C + L++ E E+
Sbjct: 65 TDYLKK------------LENAGAECIVIPCNTAHFWFNELKEACHVDILNIVETTMNEV 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
K K IG+LAT+AT+S G YQ+ ++++ + PDKA+ E V + +I L
Sbjct: 113 LATKKK--------NIGLLATNATMSMGLYQKNIESKHLNCITPDKASQEQV-MKSIYLL 163
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD-PLLKKCIDPMDALARST 322
+ + A +++ LL + +++G E+ +L + K ID +L R++
Sbjct: 164 KSGNKKMAERIMKEQANLLFQKGAEVIVLGCTEVPVILENETREYPDKYIDSTSSLVRAS 223
Query: 323 VTWARS 328
+ W +
Sbjct: 224 IHWYEN 229
>gi|170750685|ref|YP_001756945.1| aspartate racemase [Methylobacterium radiotolerans JCM 2831]
gi|170657207|gb|ACB26262.1| aspartate racemase [Methylobacterium radiotolerans JCM 2831]
Length = 250
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 120/252 (47%), Gaps = 22/252 (8%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFV--VCNDPALNEELFHASVHSLKSK 140
+G++GG+ +T++FL KLV + +D + P V + P + + A L +
Sbjct: 2 LGVLGGMGPMATVDFLAKLVRATPAGRDQDHIPTLVCSAVDIPDRADAILGAGPDPLPA- 60
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
+R A LE GA I +PC+ +H WH + G ++P LH+ + VA
Sbjct: 61 --------------MRAALARLEAGGATRIAIPCNTAHHWHAALQAGTALPILHIVDAVA 106
Query: 201 KELKEAKLKP-LEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+ L + + + AG+G R+G+LATD TL G Y+E+L +G + PD V
Sbjct: 107 ETLARTETETGIAAGTGGRVGLLATDGTLRTGLYRERLARRGLTCLGPDPEGQAAVAAAI 166
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALA 319
HR E AR LL ++ L + V++ E+ L DP + +D +ALA
Sbjct: 167 RLVKAHRVAE-ARPLLEAQVRALAEAGCDRVVMACTEIPIALAGSDP-SGRLVDATEALA 224
Query: 320 RSTVTWARSNKK 331
R+ V R +++
Sbjct: 225 RACVAACRPDQR 236
>gi|170683881|ref|YP_001743167.1| aspartate racemase [Escherichia coli SMS-3-5]
gi|301019514|ref|ZP_07183681.1| aspartate racemase [Escherichia coli MS 69-1]
gi|419370465|ref|ZP_13911585.1| aspartate racemase family protein [Escherichia coli DEC14A]
gi|419917444|ref|ZP_14435698.1| putative aspartate racemase [Escherichia coli KD2]
gi|422832209|ref|ZP_16880323.1| hypothetical protein ESNG_04828 [Escherichia coli B093]
gi|432815727|ref|ZP_20049511.1| aspartate racemase [Escherichia coli KTE115]
gi|450205576|ref|ZP_21893673.1| Putative aspartate racemase [Escherichia coli SEPT362]
gi|170521599|gb|ACB19777.1| aspartate racemase [Escherichia coli SMS-3-5]
gi|300399221|gb|EFJ82759.1| aspartate racemase [Escherichia coli MS 69-1]
gi|371615384|gb|EHO03793.1| hypothetical protein ESNG_04828 [Escherichia coli B093]
gi|378217850|gb|EHX78125.1| aspartate racemase family protein [Escherichia coli DEC14A]
gi|388394102|gb|EIL55419.1| putative aspartate racemase [Escherichia coli KD2]
gi|431363951|gb|ELG50495.1| aspartate racemase [Escherichia coli KTE115]
gi|449311563|gb|EMD01919.1| Putative aspartate racemase [Escherichia coli SEPT362]
Length = 239
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 33/248 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSA--KDAEECPPFV--VCNDPALNEELFHASVHSLKSK 140
IG++GG+ ++T++ K V ++A +D E P + + + P + L H + L
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQRDQEHIPLIISSIPDIPDRTDALMHNGLSPL--- 61
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
V ++ HK LE AGA CIV+PC+ +H W ++ + C I L + +
Sbjct: 62 ---------PVMRDYMHK---LEDAGAECIVIPCNTAHYWFKELKDACHIDILSIIDTTV 109
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
E++ RIG+LATDATL G YQ+ +++ GF + PD A + ++ +I
Sbjct: 110 DEVR--------VCGKTRIGLLATDATLYMGLYQKGIESLGFNYITPD-ADGQKNVMKSI 160
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDA 317
+L ++ A+ L+ + L R +I+G E+ +L KD PL + ID +
Sbjct: 161 YSLKAGNVTHAQKLMEEQAENLFSRGAEILILGCTEIPIILSQAVKDQPL--RYIDSTAS 218
Query: 318 LARSTVTW 325
L R+ + W
Sbjct: 219 LVRAGIKW 226
>gi|331655439|ref|ZP_08356434.1| aspartate racemase subfamily [Escherichia coli M718]
gi|331046871|gb|EGI18953.1| aspartate racemase subfamily [Escherichia coli M718]
Length = 239
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 33/248 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSA--KDAEECPPFV--VCNDPALNEELFHASVHSLKSK 140
IG++GG+ ++T++ K V ++A +D E P + + + P + L H + L
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQRDQEHIPLIISSIPDIPDRTDALMHNGLSPL--- 61
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
V ++ HK LE AGA CIV+PC+ +H W ++ + C I L + +
Sbjct: 62 ---------PVMRDYMHK---LEDAGAECIVIPCNTAHYWFTELKDACHIDILSIIDTTV 109
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
E++ RIG+LATDATL G YQ+ +++ GF + PD A + ++ +I
Sbjct: 110 DEVR--------VCGKTRIGLLATDATLYMGLYQKGIESLGFNYITPD-ADGQKNVMKSI 160
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDA 317
+L ++ A+ L+ + L R +I+G E+ +L KD PL + ID +
Sbjct: 161 YSLKAGNVTHAQKLMEEQAENLFSRGAEILILGCTEIPIILSQAVKDQPL--RYIDSTAS 218
Query: 318 LARSTVTW 325
L R+ + W
Sbjct: 219 LVRAGIKW 226
>gi|395230557|ref|ZP_10408861.1| aspartate racemase [Citrobacter sp. A1]
gi|424731382|ref|ZP_18159966.1| aspartate racemase [Citrobacter sp. L17]
gi|394715942|gb|EJF21727.1| aspartate racemase [Citrobacter sp. A1]
gi|422894033|gb|EKU33848.1| aspartate racemase [Citrobacter sp. L17]
Length = 239
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 118/246 (47%), Gaps = 29/246 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSA--KDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
IG++GG+ ++T++ K V ++A +D E P L +S+ + +T
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQRDQEHIP-------------LIISSIPDIPDRTD 51
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
L H + +R LE AGA CIV+PC+ +H W ++ E C L + E E
Sbjct: 52 ALMHHGHSPLPAMRDYMHKLEDAGAECIVIPCNTAHFWFNELKECCHTELLSIVETTMNE 111
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
+K RIG+LAT+ATL G YQ+ +++ G V PD + E V + +I
Sbjct: 112 VKNC--------GKSRIGLLATNATLYMGLYQKGIESLGLTCVSPDSSGQEKV-MDSIYC 162
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDALA 319
L D++ A+ L+ ++L R +++G E+ +L K+ P K ID +L
Sbjct: 163 LKAGDLKRAQTLMNEQAEMLFSRGAEVIVLGCTEVPVILANAVKNSP--DKYIDSTGSLV 220
Query: 320 RSTVTW 325
R+ + W
Sbjct: 221 RAGIKW 226
>gi|421846527|ref|ZP_16279674.1| aspartate racemase [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|411772121|gb|EKS55759.1| aspartate racemase [Citrobacter freundii ATCC 8090 = MTCC 1658]
Length = 239
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 118/246 (47%), Gaps = 29/246 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSA--KDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
IG++GG+ ++T++ K V ++A +D E P L +S+ + +T
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQRDQEHIP-------------LIISSIPDIPDRTD 51
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
L H + +R LE AGA CIV+PC+ +H W ++ E C L + E E
Sbjct: 52 ALMHHGHSPLPAMRDYMHKLEDAGAECIVIPCNTAHFWFNELKECCHTELLSIVETTMDE 111
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
+K RIG+LAT+ATL G YQ+ +++ G V PD + E V + +I
Sbjct: 112 VKNC--------GKSRIGLLATNATLYMGLYQKGIESLGLTCVSPDSSGQEKV-MDSIYC 162
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDALA 319
L D++ A+ L+ ++L R +++G E+ +L K+ P K ID +L
Sbjct: 163 LKAGDLKRAQTLMNEQAEMLFSRGAEVIVLGCTEVPVILANAVKNSP--DKYIDSTGSLV 220
Query: 320 RSTVTW 325
R+ + W
Sbjct: 221 RAGIKW 226
>gi|455644521|gb|EMF23621.1| aspartate racemase [Citrobacter freundii GTC 09479]
Length = 239
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 29/246 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSA--KDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
IG++GG+ ++T++ K V ++A +D E P L +S+ + +T
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQRDQEHIP-------------LIISSIPDIPDRTD 51
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
L H + +R LE AGA CIV+PC+ +H W ++ E C L + E E
Sbjct: 52 ALMHHGHSPLPAMRDYMHKLEDAGAECIVIPCNTAHFWFNELKECCHTELLSIVETTMDE 111
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
+K RIG+LAT+ATL G YQ+ +++ G V PD + E V + +I
Sbjct: 112 VKNC--------GKSRIGLLATNATLYMGLYQKGIESLGLTCVSPDSSGQEKV-MDSIYC 162
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDALA 319
L D + A+ L+ ++L R +++G E+ +L K+ P K ID +L
Sbjct: 163 LKAGDFKRAQTLMNEQAEMLFSRGAEVIVLGCTEVPVILANAVKNSP--DKYIDSTGSLV 220
Query: 320 RSTVTW 325
R+ + W
Sbjct: 221 RAGIKW 226
>gi|170765513|ref|ZP_02900324.1| aspartate racemase [Escherichia albertii TW07627]
gi|170124659|gb|EDS93590.1| aspartate racemase [Escherichia albertii TW07627]
Length = 239
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 121/248 (48%), Gaps = 33/248 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSA--KDAEECPPFV--VCNDPALNEELFHASVHSLKSK 140
IG++GG+ ++T++ K V ++A +D E P + + N P + L H H
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQRDQEHIPLIISSIPNIPDRTDALMH---HGRSPL 61
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
V D++ HK LE AGA CIV+PC+ +H W ++ + C I L + E
Sbjct: 62 PVMRDYM---------HK---LEDAGAECIVIPCNTAHYWFKELKDACHIDILSIVETTI 109
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
E+++ RIG+LAT+ATL G YQ+ +++ G + PD A + ++ +I
Sbjct: 110 NEVRDC--------GKTRIGLLATNATLYMGLYQKGIESLGLTCIRPD-ADSQKKVMESI 160
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL---PKDDPLLKKCIDPMDA 317
+L DM A+ L+ ++L R +++G E+ +L K+ P ID +
Sbjct: 161 YSLKAGDMTHAQQLMSEQAEILFSRGAEVLVLGCTEIPVILVQAVKERP--SHYIDSTAS 218
Query: 318 LARSTVTW 325
L R+ + W
Sbjct: 219 LVRAGIKW 226
>gi|365108369|ref|ZP_09336270.1| aspartate racemase [Citrobacter freundii 4_7_47CFAA]
gi|363640725|gb|EHL80175.1| aspartate racemase [Citrobacter freundii 4_7_47CFAA]
Length = 239
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 118/246 (47%), Gaps = 29/246 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSA--KDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
IG++GG+ ++T++ K V ++A +D E P L +S+ + +T
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQRDQEHIP-------------LIISSIPDIPDRTD 51
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
L H + +R LE AGA CIV+PC+ +H W ++ E C L + E E
Sbjct: 52 ALMHHGHSPLPAMRDYMHKLEDAGAECIVIPCNTAHFWFNELKECCHTELLSIVETTMNE 111
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
+K RIG+LAT+ATL G YQ+ +++ G + PD + E V + +I
Sbjct: 112 VKNC--------GKSRIGLLATNATLYMGLYQKGIESLGLTCISPDSSDQEKV-MESIYC 162
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK---KCIDPMDALA 319
L D++ A+ L+ ++L R +++G E+ +L D + K K ID +L
Sbjct: 163 LKAGDLKRAQTLMNEQAEVLFSRGAQIIVLGCTEVPVILA--DAVRKSPDKYIDSTGSLV 220
Query: 320 RSTVTW 325
R+ + W
Sbjct: 221 RAGIKW 226
>gi|420373839|ref|ZP_14873902.1| aspartate racemase family protein [Shigella flexneri 1235-66]
gi|391316862|gb|EIQ74247.1| aspartate racemase family protein [Shigella flexneri 1235-66]
Length = 241
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 120/258 (46%), Gaps = 25/258 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSA--KDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
IG++GG+ ++T++ K V ++A +D E P L +S+ + +T
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAVQRDQEHIP-------------LIISSIPDIPDRTD 51
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
L H + +R LE AGA CIV+PC+ +H W ++ E C L + E E
Sbjct: 52 ALMHHGNSPLPAMRDYMHKLEDAGAECIVIPCNTAHFWFKELKECCHTELLSIVETTISE 111
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
++ RIG+LAT+ATL G YQ+ +++ G V PD A E V + +I
Sbjct: 112 VRNC--------GKSRIGLLATNATLYMGLYQKGIESLGLTCVSPDPAGQEKV-MESIYC 162
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL-KKCIDPMDALARS 321
L D++ A+ L+ + L R +++G E+ +L + + +K ID +L R+
Sbjct: 163 LKAGDVKRAQTLMNEQAEALFSRGAQVIVLGCTEVPVILAEAVKMSPEKYIDSTGSLVRA 222
Query: 322 TVTWARSNKKLTLLLDSQ 339
+ W LL Q
Sbjct: 223 GIKWYEKRVGKNHLLAQQ 240
>gi|163856639|ref|YP_001630937.1| aspartate racemase [Bordetella petrii DSM 12804]
gi|163260367|emb|CAP42669.1| putative aspartate racemase [Bordetella petrii]
Length = 245
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 8/173 (4%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIG 220
FL AGAR I +PC+ +H W+ + +P LH+ + VA++L+ L + RIG
Sbjct: 74 FLHAAGARVIAIPCNTAHLWYDQLCAATPLPILHIIDAVAQDLRRLGL------AHGRIG 127
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQ 280
++ T ATL+ G YQ +L+ G++ ++PD +E + I A+ D+ A G++
Sbjct: 128 LMGTPATLALGLYQTRLERHGYQCIVPDADEIERYCVAPIRAVKAGDLPAAVEPAMQGVR 187
Query: 281 LLLVRAVNAVIIGSDEMQGVLP--KDDPLLKKCIDPMDALARSTVTWARSNKK 331
LL R +AV++G E+ +P + L D +DALAR+ + + R +
Sbjct: 188 LLRARGADAVVLGCTELPLAIPHAQRAALGVLLTDSIDALARAAIDYWRQTPE 240
>gi|238918933|ref|YP_002932447.1| aspartate racemase, putative [Edwardsiella ictaluri 93-146]
gi|238868501|gb|ACR68212.1| aspartate racemase, putative [Edwardsiella ictaluri 93-146]
Length = 239
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 124/257 (48%), Gaps = 29/257 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWY-SAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IG++GG+ ++T++ K V + SA+ ++ P ++ + P + + S ++
Sbjct: 5 IGVLGGMGPAATVDMFNKFVTFTSARRDQQHIPLLISSIPDIPDR----SAALMQEGHSP 60
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L +R + + LEQAGA CIV+PC+ +H W ++ + C + L++ V L
Sbjct: 61 LPAMRDYLQR--------LEQAGAECIVIPCNTAHFWFDELRQSCHVELLNI---VGATL 109
Query: 204 KEAKLKPLEAGSGVR-IGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
E SG R IG+LATDATL G YQ+ ++ G + PD+ E V + +I A
Sbjct: 110 NEV------CASGQRHIGLLATDATLYMGLYQQAIEAHGLRCIAPDRGGQEQV-MESIYA 162
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK---DDPLLKKCIDPMDALA 319
L D AR L+ L R +++G E+ +L K + P ++ I+ AL
Sbjct: 163 LKAGDAGHARRLMARQADALFARGAQIIVLGCTEVPVILAKALREQP--ERYIESTGALV 220
Query: 320 RSTVTWARSNKKLTLLL 336
R+ + W T LL
Sbjct: 221 RAGIRWYEKRVGQTDLL 237
>gi|269138277|ref|YP_003294977.1| aspartate racemase [Edwardsiella tarda EIB202]
gi|387867000|ref|YP_005698469.1| Putative aspartate racemase [Edwardsiella tarda FL6-60]
gi|267983937|gb|ACY83766.1| putative aspartate racemase [Edwardsiella tarda EIB202]
gi|304558313|gb|ADM40977.1| Putative aspartate racemase [Edwardsiella tarda FL6-60]
Length = 239
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 120/256 (46%), Gaps = 27/256 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWY-SAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IG++GG+ ++T++ K V + SA ++ P ++ +S+ + +T
Sbjct: 5 IGVLGGMGPAATVDMFNKFVTFTSASSDQQHIPLLI------------SSIPDIPDRTAA 52
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L + +R LEQAGA CIV+PC+ +H W ++ + C + L++
Sbjct: 53 LMQEGHSPLPAMRDYLQRLEQAGAECIVIPCNTAHFWFDELRQSCHVELLNI-------- 104
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
EA L + A IG+LAT+ATL G YQ+ ++ G + PD+ E V + +I AL
Sbjct: 105 VEATLNEVCASGQHHIGLLATNATLYMGLYQQAIEAHGLRCIAPDREGQEQV-MESIYAL 163
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDALAR 320
D E AR L+ L R +++G E+ +L + P ++ I+ AL R
Sbjct: 164 KAGDAEHARRLMERQADALFARGAQIIVLGCTEVPVILAEAQRAQP--ERYIESTGALVR 221
Query: 321 STVTWARSNKKLTLLL 336
+ + W T LL
Sbjct: 222 AGIRWYEKRVGKTDLL 237
>gi|417701287|ref|ZP_12350415.1| aspartate racemase [Shigella flexneri K-218]
gi|333006274|gb|EGK25783.1| aspartate racemase [Shigella flexneri K-218]
Length = 239
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 121/248 (48%), Gaps = 33/248 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAK--DAEECPPFV--VCNDPALNEELFHASVHSLKSK 140
IG++GG+ ++T++ K V ++A D E P + + + P + L H L
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQCDQEHIPLIISSIPDIPDRTDALMHHGCSPLP-- 62
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
V ++ HK LE AGA CIV+PC+ +H W ++ + C I L + E
Sbjct: 63 ----------VMRDYMHK---LEDAGAECIVIPCNTAHYWFKELKDACHIDILSIVETTI 109
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
E++ A RIG+LAT+ATL G YQ+ +++ GF V PD A + ++ +I
Sbjct: 110 NEVR--------ACGKTRIGLLATNATLYMGLYQKGIESLGFTCVSPD-ADGQKKVMESI 160
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDA 317
+L ++ A+ L+ ++L R +++G E+ +L K+ P + ID +
Sbjct: 161 YSLKAGNIAHAQKLMNEQAEILFSRGAEILVLGCTEIPVILAQAVKEQP--SRYIDSTAS 218
Query: 318 LARSTVTW 325
L R+ + W
Sbjct: 219 LVRAGIKW 226
>gi|407468617|ref|YP_006784941.1| aspartate racemase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407482652|ref|YP_006779801.1| aspartate racemase [Escherichia coli O104:H4 str. 2011C-3493]
gi|410483206|ref|YP_006770752.1| aspartate racemase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|417711822|ref|ZP_12360818.1| aspartate racemase [Shigella flexneri K-272]
gi|417715885|ref|ZP_12364818.1| aspartate racemase [Shigella flexneri K-227]
gi|417808808|ref|ZP_12455561.1| putative aspartate racemase [Escherichia coli O104:H4 str.
LB226692]
gi|417865084|ref|ZP_12510129.1| hypothetical protein C22711_2016 [Escherichia coli O104:H4 str.
C227-11]
gi|419147285|ref|ZP_13691975.1| aspartate racemase family protein [Escherichia coli DEC6B]
gi|419163370|ref|ZP_13707842.1| aspartate racemase family protein [Escherichia coli DEC6E]
gi|422991872|ref|ZP_16982643.1| aspartate racemase [Escherichia coli O104:H4 str. C227-11]
gi|422993821|ref|ZP_16984585.1| aspartate racemase [Escherichia coli O104:H4 str. C236-11]
gi|423009136|ref|ZP_16999874.1| aspartate racemase [Escherichia coli O104:H4 str. 11-3677]
gi|423023327|ref|ZP_17014030.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4404]
gi|423028477|ref|ZP_17019170.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4522]
gi|423029342|ref|ZP_17020030.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4623]
gi|423037181|ref|ZP_17027855.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423042296|ref|ZP_17032963.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423048988|ref|ZP_17039645.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423052568|ref|ZP_17041376.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423059535|ref|ZP_17048331.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4632 C5]
gi|429723379|ref|ZP_19258263.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429771244|ref|ZP_19303268.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02030]
gi|429776454|ref|ZP_19308434.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02033-1]
gi|429781677|ref|ZP_19313604.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02092]
gi|429786872|ref|ZP_19318763.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02093]
gi|429792050|ref|ZP_19323902.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02281]
gi|429797263|ref|ZP_19329068.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02318]
gi|429802469|ref|ZP_19334230.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02913]
gi|429807676|ref|ZP_19339399.1| aspartate racemase [Escherichia coli O104:H4 str. 11-03439]
gi|429812891|ref|ZP_19344571.1| aspartate racemase [Escherichia coli O104:H4 str. 11-04080]
gi|429818098|ref|ZP_19349734.1| aspartate racemase [Escherichia coli O104:H4 str. 11-03943]
gi|429907721|ref|ZP_19373689.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429911925|ref|ZP_19377881.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-9941]
gi|429917767|ref|ZP_19383707.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429922807|ref|ZP_19388728.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429923657|ref|ZP_19389573.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429932551|ref|ZP_19398445.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429934154|ref|ZP_19400044.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429939815|ref|ZP_19405689.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429947454|ref|ZP_19413309.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429950089|ref|ZP_19415937.1| aspartate racemase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429958360|ref|ZP_19424189.1| aspartate racemase [Escherichia coli O104:H4 str. Ec12-0466]
gi|432434806|ref|ZP_19677212.1| aspartate racemase [Escherichia coli KTE188]
gi|432526711|ref|ZP_19763814.1| aspartate racemase [Escherichia coli KTE230]
gi|432967143|ref|ZP_20156059.1| aspartate racemase [Escherichia coli KTE203]
gi|433215653|ref|ZP_20399161.1| aspartate racemase [Escherichia coli KTE99]
gi|433327250|ref|ZP_20403725.1| aspartate racemase [Escherichia coli J96]
gi|333008508|gb|EGK27978.1| aspartate racemase [Shigella flexneri K-272]
gi|333020629|gb|EGK39889.1| aspartate racemase [Shigella flexneri K-227]
gi|340736616|gb|EGR71043.1| putative aspartate racemase [Escherichia coli O104:H4 str.
LB226692]
gi|341918373|gb|EGT67987.1| hypothetical protein C22711_2016 [Escherichia coli O104:H4 str.
C227-11]
gi|354857105|gb|EHF17561.1| aspartate racemase [Escherichia coli O104:H4 str. C227-11]
gi|354864896|gb|EHF25325.1| aspartate racemase [Escherichia coli O104:H4 str. C236-11]
gi|354877425|gb|EHF37784.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4404]
gi|354882958|gb|EHF43280.1| aspartate racemase [Escherichia coli O104:H4 str. 11-3677]
gi|354883305|gb|EHF43626.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4522]
gi|354899259|gb|EHF59408.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354901082|gb|EHF61210.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4623]
gi|354903220|gb|EHF63329.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354904930|gb|EHF65015.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354916155|gb|EHF76129.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4632 C5]
gi|354921319|gb|EHF81244.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4632 C4]
gi|377999941|gb|EHV63016.1| aspartate racemase family protein [Escherichia coli DEC6B]
gi|378014565|gb|EHV77467.1| aspartate racemase family protein [Escherichia coli DEC6E]
gi|406778368|gb|AFS57792.1| aspartate racemase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407054949|gb|AFS75000.1| aspartate racemase [Escherichia coli O104:H4 str. 2011C-3493]
gi|407064652|gb|AFS85699.1| aspartate racemase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|429359172|gb|EKY95837.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02092]
gi|429361503|gb|EKY98157.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02030]
gi|429363074|gb|EKY99717.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02033-1]
gi|429373421|gb|EKZ09965.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02093]
gi|429377161|gb|EKZ13685.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02281]
gi|429378765|gb|EKZ15272.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02318]
gi|429389913|gb|EKZ26329.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02913]
gi|429393169|gb|EKZ29566.1| aspartate racemase [Escherichia coli O104:H4 str. 11-03439]
gi|429393752|gb|EKZ30139.1| aspartate racemase [Escherichia coli O104:H4 str. 11-03943]
gi|429395812|gb|EKZ32175.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429397883|gb|EKZ34229.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429403738|gb|EKZ40019.1| aspartate racemase [Escherichia coli O104:H4 str. 11-04080]
gi|429408844|gb|EKZ45078.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429418079|gb|EKZ54226.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429421749|gb|EKZ57870.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429423489|gb|EKZ59597.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429425560|gb|EKZ61649.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429433043|gb|EKZ69078.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429442555|gb|EKZ78511.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429448376|gb|EKZ84290.1| aspartate racemase [Escherichia coli O104:H4 str. Ec12-0466]
gi|429452510|gb|EKZ88392.1| aspartate racemase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429454510|gb|EKZ90369.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-9941]
gi|430967927|gb|ELC85178.1| aspartate racemase [Escherichia coli KTE188]
gi|431046281|gb|ELD56396.1| aspartate racemase [Escherichia coli KTE230]
gi|431473115|gb|ELH52949.1| aspartate racemase [Escherichia coli KTE203]
gi|431727682|gb|ELJ91423.1| aspartate racemase [Escherichia coli KTE99]
gi|432345006|gb|ELL39549.1| aspartate racemase [Escherichia coli J96]
Length = 239
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 124/245 (50%), Gaps = 27/245 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAE-ECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IG++GG+ ++T++ K V ++A + E P ++ + P + + A +H +S
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQCDQEHIPLIISSIPDIPDRT-DALMHHGRSPL-- 61
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
V ++ HK LE AGA CIV+PC+ +H W ++ + C I L + E E+
Sbjct: 62 ------PVMRDYMHK---LEDAGAECIVIPCNTAHYWFKELKDACHIDILSIVETTINEV 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ A RIG+LAT+ATL G YQ+ +++ GF V PD A + ++ +I +L
Sbjct: 113 R--------ACGKTRIGLLATNATLYMGLYQKGIESLGFTCVSPD-ADGQKKVMESIYSL 163
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDALAR 320
++ A+ L+ ++L R +++G E+ +L K+ P + ID +L R
Sbjct: 164 KAGNIAHAQKLMNEQAEILFSRGAEILVLGCTEIPVILAQAVKEQP--SRYIDSTASLVR 221
Query: 321 STVTW 325
+ + W
Sbjct: 222 AGIKW 226
>gi|417836338|ref|ZP_12482656.1| putative aspartate racemase [Escherichia coli O104:H4 str.
01-09591]
gi|422997526|ref|ZP_16988283.1| aspartate racemase [Escherichia coli O104:H4 str. 09-7901]
gi|423002599|ref|ZP_16993345.1| aspartate racemase [Escherichia coli O104:H4 str. 04-8351]
gi|340731013|gb|EGR60272.1| putative aspartate racemase [Escherichia coli O104:H4 str.
01-09591]
gi|354871675|gb|EHF32072.1| aspartate racemase [Escherichia coli O104:H4 str. 04-8351]
gi|354878092|gb|EHF38449.1| aspartate racemase [Escherichia coli O104:H4 str. 09-7901]
Length = 239
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 124/245 (50%), Gaps = 27/245 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAE-ECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IG++GG+ ++T++ K V ++A + E P ++ + P + + A +H +S
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQCDQEHIPLIISSIPDIPDRT-DALMHHGRSPF-- 61
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
V ++ HK LE AGA CIV+PC+ +H W ++ + C I L + E E+
Sbjct: 62 ------PVMRDYMHK---LEDAGAECIVIPCNTAHYWFKELKDACHIDILSIVETTINEV 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ A RIG+LAT+ATL G YQ+ +++ GF V PD A + ++ +I +L
Sbjct: 113 R--------ACGKTRIGLLATNATLYMGLYQKGIESLGFTCVSPD-ADGQKKVMESIYSL 163
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDALAR 320
++ A+ L+ ++L R +++G E+ +L K+ P + ID +L R
Sbjct: 164 KAGNIAHAQKLMNEQAEILFSRGAEILVLGCTEIPVILAQAVKEQP--SRYIDSTASLVR 221
Query: 321 STVTW 325
+ + W
Sbjct: 222 AGIKW 226
>gi|294635246|ref|ZP_06713748.1| putative aspartate racemase [Edwardsiella tarda ATCC 23685]
gi|291091363|gb|EFE23924.1| putative aspartate racemase [Edwardsiella tarda ATCC 23685]
Length = 316
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 123/246 (50%), Gaps = 29/246 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IG++GG+ ++T + K + +S A+ ++ P ++ + P + + A + S +S +
Sbjct: 82 IGVLGGMGPAATADLFNKFITFSNARSDQQHIPLLISSIPDIPDRT-AALMQSGRSPLPE 140
Query: 144 L-DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
+ D+++ LEQAGA CIV+PC+ +H W ++ + C + L++
Sbjct: 141 MCDYLQR------------LEQAGAECIVIPCNTAHFWFKELRQSCHVELLNI------- 181
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
EA ++ + A +IG+LATDATL G YQ+ ++ +G + PDK E V+ +I A
Sbjct: 182 -VEATMEEVCASGQQKIGLLATDATLYMGLYQQAIEARGLCCIRPDKPGQEQVMA-SIYA 239
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDALA 319
L D AR ++ L R +++G E+ +L K P + I+ AL
Sbjct: 240 LKAGDAARARAMMEQQAAALFARGAQLIVLGCTEVPVILAEAMKAQP--SRYIESTGALV 297
Query: 320 RSTVTW 325
R+ + W
Sbjct: 298 RAGIRW 303
>gi|451967009|ref|ZP_21920256.1| putative aspartate racemase [Edwardsiella tarda NBRC 105688]
gi|451314162|dbj|GAC65618.1| putative aspartate racemase [Edwardsiella tarda NBRC 105688]
Length = 239
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 123/246 (50%), Gaps = 29/246 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IG++GG+ ++T + K + +S A+ ++ P ++ + P + + A + S +S +
Sbjct: 5 IGVLGGMGPAATADLFNKFITFSNARSDQQHIPLLISSIPDIPDRT-AALMQSGRSPLPE 63
Query: 144 L-DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
+ D+++ LEQAGA CIV+PC+ +H W ++ + C + L++
Sbjct: 64 MCDYLQ------------RLEQAGAECIVIPCNTAHFWFKELRQSCHVELLNI------- 104
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
EA ++ + A +IG+LATDATL G YQ+ ++ +G + PDK E V + +I A
Sbjct: 105 -VEATMEEVCASGQQKIGLLATDATLYMGLYQQAIEARGLCCIRPDKPGQEQV-MASIYA 162
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDALA 319
L D AR ++ L R +++G E+ +L K P + I+ AL
Sbjct: 163 LKAGDAARARAMMEQQAAALFARGAQLIVLGCTEVPVILAEAMKAQP--SRYIESTGALV 220
Query: 320 RSTVTW 325
R+ + W
Sbjct: 221 RAGIRW 226
>gi|419039954|ref|ZP_13586989.1| aspartate racemase family protein [Escherichia coli DEC2E]
gi|419263462|ref|ZP_13805867.1| aspartate racemase family protein [Escherichia coli DEC10B]
gi|377892696|gb|EHU57138.1| aspartate racemase family protein [Escherichia coli DEC2E]
gi|378102248|gb|EHW63927.1| aspartate racemase family protein [Escherichia coli DEC10B]
Length = 239
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 122/243 (50%), Gaps = 23/243 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAE-ECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IG++GG+ ++T++ K V ++A + E P ++ + P + + A +H +S
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQCDQEHIPLIISSIPDIPDRT-DALMHHGRSPL-- 61
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
V ++ HK LE AGA CIV+PC+ +H W ++ + C I L + E E+
Sbjct: 62 ------PVMRDYMHK---LEDAGAECIVIPCNTAHYWFKELKDACHIDILSIVETTINEV 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ A RIG+LAT+ATL G YQ+ +++ GF V PD A + ++ +I +L
Sbjct: 113 R--------ACGKTRIGLLATNATLYMGLYQKGIESLGFTCVSPD-ADGQKKVMESIYSL 163
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD-DPLLKKCIDPMDALARST 322
++ A+ L+ ++L R +++G E+ +L + + ID +L R+
Sbjct: 164 KAGNIAHAQKLMNEQAEILFSRGAEILVLGCTEIPVILAQAVKEQTSRYIDSTASLVRAG 223
Query: 323 VTW 325
+ W
Sbjct: 224 IKW 226
>gi|422009925|ref|ZP_16356907.1| aspartate racemase [Providencia rettgeri Dmel1]
gi|414092098|gb|EKT53777.1| aspartate racemase [Providencia rettgeri Dmel1]
Length = 242
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 117/246 (47%), Gaps = 23/246 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IG++GG+ ++T++ K V Y+ A +E P ++ + P + + H +
Sbjct: 5 IGVLGGMGPAATVDLFNKFVNYTVANRDQEHIPLIISSIPDIPDRTEALLNHGESPLPLM 64
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
D+++ LE AGA CIV+PC+ +H W ++ + C + L + E KE+
Sbjct: 65 TDYLKK------------LENAGAECIVIPCNTAHYWFSELKDICHVDMLSIVETTMKEV 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
K K IG+LAT+AT+ G YQ+ ++N+ + PDK + V + +I L
Sbjct: 113 LATKKK--------NIGLLATNATMYMGLYQKNIENKYLNCITPDKESQGKV-MESIYLL 163
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD-DPLLKKCIDPMDALARST 322
+ + A +++ + L R +++G E+ +L + + K ID L R++
Sbjct: 164 KSGNKKMAEAIMKKQAEALFSRGAEIIVLGCTEVPVILENEINNYPDKYIDSTSTLVRAS 223
Query: 323 VTWARS 328
+ W S
Sbjct: 224 IHWYES 229
>gi|354721952|ref|ZP_09036167.1| aspartate racemase [Enterobacter mori LMG 25706]
Length = 239
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 116/247 (46%), Gaps = 21/247 (8%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G++GG+ +TL+FL +L+ + A+ ++ P VV N P + + +A + S Q
Sbjct: 7 LGVLGGMGPLATLDFLRRLLEATPAQSDQQQIPMVVWNVPQIADRQ-NALAGTGPSPLPQ 65
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L H AV + L QAGA I +PC+ +H W+ +SE S P LH+ + L
Sbjct: 66 LLH---AVEK--------LNQAGASHIAIPCNTAHHWYDALSEASSAPILHIVDATLDAL 114
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+A KP R+GV+AT TL AG+YQE+L Q EVV+P + +P A+
Sbjct: 115 SQADEKP------QRVGVIATKGTLDAGWYQERLAAQAIEVVVPTPEELAEWFVPGCYAV 168
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL-PKDDPLLKKCIDPMDALA-RS 321
+ LL + L R +++ E+ L P DP ALA R
Sbjct: 169 KRGALVDGGELLVLQANALFARGAQKLVLACTEVPVALEAARAPFRHLTWDPAQALAERC 228
Query: 322 TVTWARS 328
+ W S
Sbjct: 229 SQLWQTS 235
>gi|337280382|ref|YP_004619854.1| aspartate racemase [Ramlibacter tataouinensis TTB310]
gi|334731459|gb|AEG93835.1| aspartate racemase-like protein [Ramlibacter tataouinensis TTB310]
Length = 233
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 27/253 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEE---LFHASVHSLKSK 140
IG++GG+ +T +F K++ + A+ E+ P +V +DP + + H L +
Sbjct: 2 IGVLGGMGPLATADFFRKVITLTDARRDEDHVPLLVQSDPRIPPRPAAILHGGESPLPAL 61
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
D + GA GA + MPC+ +H W+ + GC +PF+ + E
Sbjct: 62 LAGRDRLIGA---------------GATMLAMPCNTAHHWYAQLVSGCPVPFISIVEASC 106
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+A + AG+ V G+LAT ATL+A Y+ L+ +G +LPD A ++ ++P I
Sbjct: 107 ----DAAAGRVPAGAAV--GLLATRATLAARLYEPALRARGLRPMLPDDALLDTFVLPAI 160
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD-PLLKKCIDPMDALA 319
E + ++ A +R + L R AV++ E+ L D L C+D LA
Sbjct: 161 EDVKAGRLDAAARQVRHAVAALSQRGAQAVVLACTELPIALQHGDTATLPACVDTTLELA 220
Query: 320 RSTV-TWARSNKK 331
R+ V W ++++
Sbjct: 221 RACVHQWQAASRR 233
>gi|188585267|ref|YP_001916812.1| aspartate racemase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349954|gb|ACB84224.1| aspartate racemase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 244
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 131/255 (51%), Gaps = 24/255 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G++GG+ +T++F+ K+V + A ++ VV N+P + + ++K +
Sbjct: 6 VGVLGGMGPQATVDFMDKVVKKTPATKDQDHIRMVVDNNPQVPD----------RTKAI- 54
Query: 144 LDHIRGAVSQN--LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
I G + N LR LE GA +VMPC+ +H ++ D+ + +IPF+++ EC A+
Sbjct: 55 ---IEGGDNPNTYLRDMAKRLENMGADFLVMPCNTAHYFYKDIQDVVNIPFVNMLECTAR 111
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
+ KL ++ G ++G+LAT TL YQ +L GFEV+ P+ + +++ I
Sbjct: 112 YIN--KLIGNDSKQG-KVGLLATSGTLQTEIYQNQLSQFGFEVITPEP--YQQLVMEAIY 166
Query: 262 ALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALAR 320
A+ D+ R LL I+ L A+I+G E+ + + + IDP + LA
Sbjct: 167 AVKAGDIGTSTRELLEKPIKQLENNGAKAIIMGCTEIPVIATTEQTTQAELIDPTEVLAD 226
Query: 321 STVTWA-RSNKKLTL 334
TV+ A ++ KL +
Sbjct: 227 ETVSRALKTGDKLEI 241
>gi|90414492|ref|ZP_01222467.1| hypothetical aspartate racemase [Photobacterium profundum 3TCK]
gi|90324400|gb|EAS40962.1| hypothetical aspartate racemase [Photobacterium profundum 3TCK]
Length = 236
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 123/249 (49%), Gaps = 27/249 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GI+GG+ +T+ F+ K++ + A + ++ P +V N+P + + + +
Sbjct: 5 LGILGGMGPLATVEFMQKIISRTPAHNDQQHIPMLVSNNPQIPDRTAYIISNG------- 57
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
+ A+ Q + L+QAGA CIVMPC+ +H W+ ++ C++ + + + V E
Sbjct: 58 -EDPYPALKQGMEQ----LQQAGAECIVMPCNTAHYWYTRLTNSCNVHTISIIDSVVSEA 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
K + + +G+LAT AT+ AG YQ KL Q + + + I+ I A+
Sbjct: 113 KHRRYQ--------TVGLLATTATMMAGMYQTKLAQQQINAIETTDSE-QQAIMNGIYAV 163
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD---DPLLKKCIDPMDALAR 320
++E + L++ + +L R AVI G E+ L + P + C+D +D LA
Sbjct: 164 KAGNVEHGKQLMQPVFEAMLNRGAEAVIFGCTEIPVALAEQTISQP--QHCLDSLDILAE 221
Query: 321 STVTWARSN 329
V WA+++
Sbjct: 222 QCVHWAQAD 230
>gi|340001823|ref|YP_004732707.1| aspartate racemase [Salmonella bongori NCTC 12419]
gi|339515185|emb|CCC32969.1| putative aspartate racemase [Salmonella bongori NCTC 12419]
Length = 244
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 125/270 (46%), Gaps = 35/270 (12%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVW--YSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG+ ++T + L K V +++ D + P L +S+ + +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVALRHASCDQQHIP-------------LIVSSIPDIPDR 49
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
T L + + L LE AGA CIV+PC+ +H W D+ + + + +
Sbjct: 50 TACLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKVRMISILDATL 109
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ + S R+G+LATDATL+ G YQ+K G ++ P+ A E V + I
Sbjct: 110 EAIPR---------SARRVGLLATDATLATGLYQKKTLAHGLTLIQPEGAGQERV-MQAI 159
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALA 319
AL D A+ LL I L+VR A+I+G E+ ++ + + ID +L
Sbjct: 160 YALKRGDKSAAQALLLPQIDSLIVRGAQAIIMGCTEIPLIVAGHESAIACPIIDSTASLV 219
Query: 320 RSTVTWARSNKKLTLLLDSQSSAKQCPREQ 349
R+ + W S D++SS PREQ
Sbjct: 220 RAAIRWYESWP------DTRSS---LPREQ 240
>gi|397166366|ref|ZP_10489811.1| aspartate racemase family protein [Enterobacter radicincitans DSM
16656]
gi|396092121|gb|EJI89686.1| aspartate racemase family protein [Enterobacter radicincitans DSM
16656]
Length = 253
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 109/238 (45%), Gaps = 20/238 (8%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECP-PFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G++GG+ +TL+F KL+ + D+++ P VV N P + +
Sbjct: 10 LGVLGGMGPLATLDFQHKLLQATPADSDQQQLPSVVWNVP------------QIADRQKA 57
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L + + L L QAGA I +PC+ +H W+ ++S + P LH+ + L
Sbjct: 58 LAGLGPSPLPQLLQGIEKLNQAGASHIAIPCNTAHHWYDELSRASNAPLLHIVDATMASL 117
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
KP R+GV+AT TL AG+YQ++L QG EV+LP+ ++ +P A+
Sbjct: 118 ANLAHKP------QRVGVIATQGTLDAGWYQQRLTQQGIEVLLPNDDELQQWFVPGCYAV 171
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD-PLLKKCIDPMDALAR 320
+ LL LL R +I+ E+ L P L + DP ALA+
Sbjct: 172 KRGALHEGGELLAKQANALLERGAQQLILACTEVPVALEAIAVPFLAQTCDPSQALAQ 229
>gi|300819053|ref|ZP_07099256.1| aspartate racemase [Escherichia coli MS 107-1]
gi|301328463|ref|ZP_07221533.1| aspartate racemase [Escherichia coli MS 78-1]
gi|415881415|ref|ZP_11545425.1| aspartate racemase [Escherichia coli MS 79-10]
gi|300528353|gb|EFK49415.1| aspartate racemase [Escherichia coli MS 107-1]
gi|300845127|gb|EFK72887.1| aspartate racemase [Escherichia coli MS 78-1]
gi|342926146|gb|EGU94868.1| aspartate racemase [Escherichia coli MS 79-10]
Length = 229
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 33/239 (13%)
Query: 94 SSTLNFLGKLVWYSA--KDAEECPPFV--VCNDPALNEELFHASVHSLKSKTVQLDHIRG 149
++T++ K V ++A +D E P + + + P + L H + L
Sbjct: 4 AATVDLFNKFVTFTAAQRDQEHIPLIISSIPDIPDRTDALMHNGLSPL------------ 51
Query: 150 AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLK 209
V ++ HK LE AGA CIV+PC+ +H W ++ + C I L + + E++
Sbjct: 52 PVMRDYMHK---LEDAGAECIVIPCNTAHYWFKELKDACHIDILSIIDTTVDEVR----- 103
Query: 210 PLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDME 269
RIG+LATDATL G YQ+ +++ GF + PD A + ++ +I +L ++
Sbjct: 104 ---VCGKTRIGLLATDATLYMGLYQKGIESLGFNYITPD-ADGQKNVMKSIYSLKAGNVT 159
Query: 270 GARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDALARSTVTW 325
A+ L+ + L R +I+G E+ +L KD PL + ID +L R+ + W
Sbjct: 160 HAQKLMEEQAENLFSRGAEILILGCTEIPIILSQAVKDQPL--RYIDSTASLVRAGIKW 216
>gi|421481181|ref|ZP_15928767.1| aspartate racemase family protein 2 [Achromobacter piechaudii HLE]
gi|400200631|gb|EJO33581.1| aspartate racemase family protein 2 [Achromobacter piechaudii HLE]
Length = 247
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 8/177 (4%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIG 220
FLEQAGA+ I +PC+ +H W+ +++ +P LH+ + V +L+ L G RIG
Sbjct: 75 FLEQAGAQLIAIPCNTAHLWYDEIAASTGLPVLHIIQAVIDDLRRLGLP-----RG-RIG 128
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQ 280
++ T ATL G YQ+ L+ QG+E ++PD +E + +I A+ +E A I
Sbjct: 129 LMGTAATLKLGLYQKHLEAQGYECIVPDDDEVERYCMGSIRAVKGNQLEAAFAPAAECIA 188
Query: 281 LLLVRAVNAVIIGSDEMQGVLPKD-DPLLKKCI-DPMDALARSTVTWARSNKKLTLL 335
L R +AV++G E+ +P P L + D +DALAR+ + +++ L+
Sbjct: 189 RLKARGADAVVLGCTELPLAVPHALRPSLGVTLTDSIDALARAAIAHYEADQAKQLI 245
>gi|311106491|ref|YP_003979344.1| aspartate racemase family protein 2 [Achromobacter xylosoxidans A8]
gi|310761180|gb|ADP16629.1| aspartate racemase family protein 2 [Achromobacter xylosoxidans A8]
Length = 244
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 8/166 (4%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIG 220
FL+ AGAR I +PC+ +H W+ ++ +P LH+ + V +L+ L S RIG
Sbjct: 75 FLQDAGARLIAIPCNTAHLWYDQIAASTGVPVLHIIQAVIDDLRRLGL------SAGRIG 128
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQ 280
++ T ATL G YQ+ L+ QG++ ++PD +E + +I A+ +E A I
Sbjct: 129 LMGTAATLKLGLYQQHLEAQGYQCIVPDDDEVERYCMGSIRAVKANRLEDAYAPAAECIA 188
Query: 281 LLLVRAVNAVIIGSDEMQGVLPKD-DPLLKKCI-DPMDALARSTVT 324
L R +AV++G E+ +P P L + D +DALAR+ +
Sbjct: 189 RLKARGADAVVLGCTELPLAVPHALRPSLGVTLTDSIDALARAAIA 234
>gi|365882291|ref|ZP_09421543.1| Aspartate racemase [Bradyrhizobium sp. ORS 375]
gi|365289405|emb|CCD94074.1| Aspartate racemase [Bradyrhizobium sp. ORS 375]
Length = 236
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 117/245 (47%), Gaps = 29/245 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE----ELFHASVHSLKSK 140
+G++GG+ +T++F+GK++ N PA + E+ S S+ +
Sbjct: 3 LGVLGGMGPMATVDFMGKVIR---------------NTPAACDQDHIEMVVCSATSVPDR 47
Query: 141 TVQ-LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
T LD R + L LE++GA CI +PC+ +H WHG + +P LH+ + +
Sbjct: 48 TAAILDQGRDPLPAML-DALDRLERSGATCIAIPCNTAHHWHGALQARTRVPILHIVDAL 106
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
A L LK G IGVLATD T+ AG YQ +L +G+ +PD A V +
Sbjct: 107 ADALAARGLK------GTTIGVLATDGTVRAGIYQRRLAKRGYACAMPDGAGQAEV-MRA 159
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDAL 318
I + D++ A +L Q L+ + + V + E+ L LK + +DP D L
Sbjct: 160 IRLVKAGDVDAATTILSRQAQALVAKGCSHVAMACTEIPLALAAVQGELKQRMLDPTDIL 219
Query: 319 ARSTV 323
A++ V
Sbjct: 220 AQACV 224
>gi|261344626|ref|ZP_05972270.1| putative aspartate racemase [Providencia rustigianii DSM 4541]
gi|282567542|gb|EFB73077.1| putative aspartate racemase [Providencia rustigianii DSM 4541]
Length = 235
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 117/247 (47%), Gaps = 27/247 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IG++GG+ ++T++ K V ++ A +E P ++ + P + + H + +
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFNHANKDQEHIPLIISSIPDIPDRTEALLNHGVSPLPLM 64
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
D+++ LE AGA CIV+PC+ +H W ++ + C + L + E E+
Sbjct: 65 EDYLQR------------LEVAGAECIVIPCNTAHFWFDELKKSCHVEILSIIEATMNEV 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ +IG+LATDAT+ G YQ+ +++QG + PD + +I+ +I L
Sbjct: 113 ISTQKN--------KIGLLATDATMHMGLYQQSIEDQGLICIKPDNEN-QKMIMKSIYLL 163
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDALAR 320
+ A ++++ +L +++G E+ +L K P K ID AL R
Sbjct: 164 KSGEFSLAEDIMKKQADILFSNGAEIIVLGCTEVPVILSNEVKSHP--DKYIDSTGALVR 221
Query: 321 STVTWAR 327
+ + W +
Sbjct: 222 AGINWYK 228
>gi|359799349|ref|ZP_09301911.1| aspartate racemase family protein 2 [Achromobacter arsenitoxydans
SY8]
gi|359362653|gb|EHK64388.1| aspartate racemase family protein 2 [Achromobacter arsenitoxydans
SY8]
Length = 229
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 8/177 (4%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIG 220
FLEQAGA+ I +PC+ +H W +++ +P LH+ + V ++L+ L G RIG
Sbjct: 57 FLEQAGAQLIAIPCNTAHLWFDEIAASTRLPVLHIIQAVIEDLRRLGLP-----RG-RIG 110
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQ 280
++ T ATL G YQ L+ QG+E ++PD +E + +I A+ +E A I
Sbjct: 111 LMGTAATLKLGLYQRHLEAQGYECIVPDDDEVERYCMGSIRAVKGNQLEDAFAPAAECIA 170
Query: 281 LLLVRAVNAVIIGSDEMQGVLPKD-DPLLKKCI-DPMDALARSTVTWARSNKKLTLL 335
L R +AV++G E+ +P P L + D +DALAR+ + ++++ L+
Sbjct: 171 RLKARGADAVVLGCTELPLAVPHALRPSLGVTLTDSIDALARAAIAHYQADQPEQLI 227
>gi|317492681|ref|ZP_07951108.1| aspartate racemase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919431|gb|EFV40763.1| aspartate racemase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 245
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 24/255 (9%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWY-SAKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
+TIGI+GG+ ++T + L K V + A ++ P + C+ P + + S L
Sbjct: 3 HTIGILGGMGPAATADMLNKFVRFRHAGQDQQHIPIIACSIPDIPDR----SACLLSGGP 58
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
D+ L LE AGA CIV+PC+ +H W + +++ +
Sbjct: 59 SPYDY--------LERYLHMLETAGAECIVIPCNTAHYWFDRLQHSAHAEMINILDATLA 110
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
EL A +G+LATDATL+ G YQ KL QG + +P+ + ++ I
Sbjct: 111 ELPHASQT---------VGLLATDATLATGLYQHKLDQQGRTLCVPE-GDGQSAVMQAIY 160
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL-PKDDPLLKKCIDPMDALAR 320
A D+ +++LL ++ L+ R + +I+G E+ ++ ++D ID AL R
Sbjct: 161 AYKAGDIALSQSLLFPQVEALMTRGADIIIMGCTEIPLIIGAEEDRFNCGFIDSTAALVR 220
Query: 321 STVTWARSNKKLTLL 335
+ + W + T+L
Sbjct: 221 AAIRWYEAKNGETVL 235
>gi|293605594|ref|ZP_06687974.1| aspartate racemase [Achromobacter piechaudii ATCC 43553]
gi|292815974|gb|EFF75075.1| aspartate racemase [Achromobacter piechaudii ATCC 43553]
Length = 247
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIG 220
FLEQAGA+ I +PC+ +H W+ D++ +P LH+ + V +L+ L RIG
Sbjct: 75 FLEQAGAQLIAIPCNTAHLWYHDIAAATGVPVLHIIQAVIDDLRRLGLPK------GRIG 128
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQ 280
++ T ATL G YQ+ L QG+E ++PD +E + +I A+ +E A I
Sbjct: 129 LMGTAATLKLGLYQKHLLAQGYECIVPDDDEVERYCMGSIRAVKGNRLEEAFAPAAECIS 188
Query: 281 LLLVRAVNAVIIGSDEMQGVLPK--DDPLLKKCIDPMDALARSTVTWARSN 329
L R +AV++G E+ +P L D +DALAR+ + ++
Sbjct: 189 RLKARGADAVVLGCTELPLAVPHALRASLGVTLTDSIDALARAAIAHYEAD 239
>gi|422320336|ref|ZP_16401398.1| aspartate racemase [Achromobacter xylosoxidans C54]
gi|317404913|gb|EFV85281.1| aspartate racemase [Achromobacter xylosoxidans C54]
Length = 247
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 8/166 (4%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIG 220
FLE+AGA+ I +PC+ +H W+ D++ P LH+ + V +L+ L+ G RIG
Sbjct: 75 FLERAGAQLIAIPCNTAHLWYDDIAAATLRPVLHIIQAVIDDLRRLGLQ-----QG-RIG 128
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQ 280
++ T ATL G YQ L+ QG+E ++PD +E + +I A+ +E A I
Sbjct: 129 LMGTAATLKLGLYQRHLEAQGYECIVPDDDEVERYCMASIRAVKGNQLEAAFAPAADCIA 188
Query: 281 LLLVRAVNAVIIGSDEMQGVLPKD-DPLLKKCI-DPMDALARSTVT 324
L R +AV++G E+ +P P L + D +DALAR+ +
Sbjct: 189 RLKARGADAVVLGCTELPLAVPHALRPSLGITLTDSIDALARAAIA 234
>gi|315230092|ref|YP_004070528.1| aspartate racemase [Thermococcus barophilus MP]
gi|315183120|gb|ADT83305.1| aspartate racemase [Thermococcus barophilus MP]
Length = 230
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 120/249 (48%), Gaps = 23/249 (9%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSL 137
+ + IGI+GG+ +T+ ++V + AK ++ P ++ N+P + + + + L
Sbjct: 1 MGKEKIIGILGGMGPMATVELFKRIVLKTPAKRDQDHPRIIIYNNPKIPDR----TAYIL 56
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
L + + + LE GA I+MPC+ +H + ++ +IP +++ E
Sbjct: 57 GKGENPLPELIDSAKK--------LESWGADFIIMPCNTAHFFADEIQRAINIPLINMIE 108
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
A+ +K+ +K R+G+LAT T+ +G YQ L+ +G +V++P+K E+V+
Sbjct: 109 ETAEYVKQLGIK--------RVGLLATTGTVVSGIYQRALEKKGIKVIIPNKEEQENVMR 160
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
E + E R LL + I L + +I G E+ L +D L IDPMD
Sbjct: 161 GIYEGIKANKFEFGRELL-LEIAKKLEKESEGIIAGCTEVSVALKPED-LEVPLIDPMDV 218
Query: 318 LARSTVTWA 326
+A V A
Sbjct: 219 IAEKAVKLA 227
>gi|161504935|ref|YP_001572047.1| hypothetical protein SARI_03065 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160866282|gb|ABX22905.1| hypothetical protein SARI_03065 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 244
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 120/249 (48%), Gaps = 26/249 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG+ ++T + L K V +++ D + P L +S+ + +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIP-------------LIVSSIPDIPDR 49
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
T L + + L LE AGA CIV+PC+ +H W D+ +V +
Sbjct: 50 TAYLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARM 101
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ +A L+ + S +G+LAT+ATL+ G YQ+K Q G ++ P+ A + +++ I
Sbjct: 102 ISILDATLEDIPP-SARHVGLLATNATLATGLYQKKAQAHGLTLIQPEDAG-QALVMQAI 159
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP-KDDPLLKKCIDPMDALA 319
L D A+ LL I L+ R V A+I+G E+ ++ +D + ID +L
Sbjct: 160 YTLKRGDKPAAQALLLPQIDSLVARGVQAIIMGCTEIPLIVAGYEDAVACPMIDSTASLV 219
Query: 320 RSTVTWARS 328
R+ + W S
Sbjct: 220 RAAIRWYES 228
>gi|14521575|ref|NP_127051.1| aspartate racemase [Pyrococcus abyssi GE5]
gi|5458794|emb|CAB50281.1| racD-1 aspartate racemase [Pyrococcus abyssi GE5]
gi|380742185|tpe|CCE70819.1| TPA: aspartate racemase [Pyrococcus abyssi GE5]
Length = 228
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 121/245 (49%), Gaps = 22/245 (8%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
IGI+GG+ +T+ ++V + AK ++ P ++ N+P + + + K +
Sbjct: 2 KVIGILGGMGPLATVEMFKRIVEKTPAKKDQDHPKIIIFNNPQIPD---RTAFILGKGED 58
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+ + I+ A LE+ GA I+MPC+ +HA+ D+ + IP + + E AK
Sbjct: 59 PRPELIKTAKK---------LEECGADFIIMPCNTAHAFIEDIRKAIRIPIISMIEETAK 109
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
++KE K ++G+LAT T+++G Y+++ G EV++P + E V+ +
Sbjct: 110 KVKELGFK--------KVGLLATTGTIASGVYEKEFSKYGIEVLIPREDEQEEVMKGIYD 161
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARS 321
+ ++E + LL + L R +I G E+ VL + D L IDPMD +A +
Sbjct: 162 GVKAGNLELGKELLIKIARKLEERGAECIIAGCTEVSVVLSEKD-LKVPLIDPMDVIAEA 220
Query: 322 TVTWA 326
V A
Sbjct: 221 AVKVA 225
>gi|291085128|ref|ZP_06352145.2| putative aspartate racemase [Citrobacter youngae ATCC 29220]
gi|291072057|gb|EFE10166.1| putative aspartate racemase [Citrobacter youngae ATCC 29220]
Length = 229
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 29/237 (12%)
Query: 94 SSTLNFLGKLVWYSA--KDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQLDHIRGAV 151
++T++ K V ++A +D E P L +S+ + +T L +
Sbjct: 4 AATVDLFNKFVTFTAAQRDQEHIP-------------LIISSIPDIPDRTDALMRHGNSP 50
Query: 152 SQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPL 211
+R LE AGA CIV+PC+ +H W ++ E C L + E E+K
Sbjct: 51 LPAMRDYMHKLEDAGAECIVIPCNTAHFWFNELKESCHTELLSIVETTLNEVKNC----- 105
Query: 212 EAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGA 271
RIG+LAT+ATL G YQ+ +++ G V PD ++ E V + +I L D++ A
Sbjct: 106 ---GKSRIGLLATNATLYMGLYQKGIESLGLTCVSPDSSSQEKV-MESIYCLKAGDIKRA 161
Query: 272 RNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDALARSTVTW 325
+ L+ + L R +++G E+ +L K P K ID +L R+ + W
Sbjct: 162 QTLMNEQAEALFSRGAEVIVLGCTEVPVILAEAVKKSP--AKYIDSTGSLVRAGIKW 216
>gi|237732212|ref|ZP_04562693.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226907751|gb|EEH93669.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 229
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 94 SSTLNFLGKLVWYSA--KDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQLDHIRGAV 151
++T++ K V ++A +D E P L +S+ + +T L H +
Sbjct: 4 AATVDLFNKFVTFTAAQRDQEHIP-------------LIISSIPDIPDRTDALMHHGHSP 50
Query: 152 SQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPL 211
+R LE AGA CIV+PC+ +H W ++ E C L + E E+K
Sbjct: 51 LPAMRDYMHKLEDAGAECIVIPCNTAHFWFNELKECCHTELLSIVETTMNEVKNC----- 105
Query: 212 EAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGA 271
RIG+LAT+ATL G YQ+ +++ G + PD + E V + +I L D++ A
Sbjct: 106 ---GKSRIGLLATNATLYMGLYQKGIESLGLTCISPDSSGQEKV-MESIYCLKAGDLKRA 161
Query: 272 RNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK---KCIDPMDALARSTVTW 325
+ L+ ++L R +++G E+ +L D + K K ID +L R+ + W
Sbjct: 162 QTLMNEQAEVLFSRGAQIIVLGCTEVPVILA--DAVRKSPDKYIDSTGSLVRAGIKW 216
>gi|211639250|emb|CAR94649.1| hypothetical protein [Escherichia coli]
Length = 229
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 117/236 (49%), Gaps = 27/236 (11%)
Query: 94 SSTLNFLGKLVWYSAKDAE-ECPPFVVCNDPALNEELFHASVHSLKSKTVQLDHIRGAVS 152
++T++ K V ++A + E P ++ + P + + A +H +S V
Sbjct: 4 AATVDLFNKFVTFTAAQCDQEHIPLIISSIPDIPDRT-DALMHHGRSPL--------PVM 54
Query: 153 QNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLE 212
++ HK LE AGA CIV+PC+ +H W ++ + C I L + E E++
Sbjct: 55 RDYMHK---LEDAGAECIVIPCNTAHYWFKELKDACHIDILSIVETTINEVR-------- 103
Query: 213 AGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGAR 272
A RIG+LAT+ATL G YQ+ +++ GF V PD A + ++ +I +L ++ A+
Sbjct: 104 ACGKTRIGLLATNATLYMGLYQKGIESLGFTCVSPD-ADGQKKVMESIYSLKAGNIAHAQ 162
Query: 273 NLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDALARSTVTW 325
L+ ++L R +++G E+ +L K+ P + ID +L R+ + W
Sbjct: 163 KLMNEQAEILFSRGAEILVLGCTEIPDILAQAVKEQP--SRYIDSAASLVRAGIKW 216
>gi|227115199|ref|ZP_03828855.1| aspartate racemase [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 238
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 116/249 (46%), Gaps = 35/249 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEE----LFHASVHSLKSK 140
+GI+GG+ +T++ + KL+ N PA ++ + S+ + +
Sbjct: 5 VGILGGMGPGATVDAMQKLIK---------------NTPAYRDQDHIPMIAVSIPDIPDR 49
Query: 141 T-VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
T L H + + L++ + LE AGA CI++PC+ +H W D+ + C + + +
Sbjct: 50 TKCILQHSASPLDKMLQYMK-ILENAGAECIIIPCNTAHYWFNDLKKQCRAEMISIIDVT 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+ +K A + R+G+LAT AT+ A YQ+ L E PD A +H ++ +
Sbjct: 109 CQAIKNA--------NTTRVGLLATTATVKARIYQDNLTTDNIECYTPDDAD-QHQVMES 159
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMD 316
I A D++ A +LL LL V +I+G E+ +L K P + +D +
Sbjct: 160 IYAYKSGDIDRAYSLLSPVKDRLLQAGVEKIILGCTELPLILEQEVKTSP--QHYVDATE 217
Query: 317 ALARSTVTW 325
L + TV W
Sbjct: 218 ELIKKTVEW 226
>gi|14590552|ref|NP_142620.1| aspartate racemase [Pyrococcus horikoshii OT3]
gi|21465704|pdb|1JFL|A Chain A, Crystal Structure Determination Of Aspartate Racemase From
An Archaea
gi|21465705|pdb|1JFL|B Chain B, Crystal Structure Determination Of Aspartate Racemase From
An Archaea
gi|3257078|dbj|BAA29761.1| 228aa long hypothetical aspartate racemase [Pyrococcus horikoshii
OT3]
Length = 228
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 30/249 (12%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
TIGI+GG+ +T ++V + AK +E P ++ N+P + +
Sbjct: 2 KTIGILGGMGPLATAELFRRIVIKTPAKRDQEHPKVIIFNNPQIPD-------------- 47
Query: 142 VQLDHIRGAVSQNLRHKRAF----LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
+ +I G ++ R + + LE+ GA I+MPC+ +HA+ D+ + IP + + E
Sbjct: 48 -RTAYILGK-GEDPRPQLIWTAKRLEECGADFIIMPCNTAHAFVEDIRKAIKIPIISMIE 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
AK++KE K + G+LAT T+ +G Y+++ G E++ P + + V+
Sbjct: 106 ETAKKVKELGFK--------KAGLLATTGTIVSGVYEKEFSKYGVEIMTPTEDEQKDVMR 157
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
E + +++ R LL ++L R +I G E+ VL +DD L IDPMD
Sbjct: 158 GIYEGVKAGNLKLGRELLLKTAKILEERGAECIIAGCTEVSVVLKQDD-LKVPLIDPMDV 216
Query: 318 LARSTVTWA 326
+A V A
Sbjct: 217 IAEVAVKVA 225
>gi|300946728|ref|ZP_07160978.1| aspartate racemase [Escherichia coli MS 116-1]
gi|300976693|ref|ZP_07173549.1| aspartate racemase [Escherichia coli MS 200-1]
gi|15808704|gb|AAL08433.1|AF326777_8 unknown [Shigella flexneri 2a]
gi|300308501|gb|EFJ63021.1| aspartate racemase [Escherichia coli MS 200-1]
gi|300453611|gb|EFK17231.1| aspartate racemase [Escherichia coli MS 116-1]
Length = 229
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 117/236 (49%), Gaps = 27/236 (11%)
Query: 94 SSTLNFLGKLVWYSAKDAE-ECPPFVVCNDPALNEELFHASVHSLKSKTVQLDHIRGAVS 152
++T++ K V ++A + E P ++ + P + + A +H +S V
Sbjct: 4 AATVDLFNKFVTFTAAQCDQEHIPLIISSIPDIPDRT-DALMHHGRSPL--------PVM 54
Query: 153 QNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLE 212
++ HK LE AGA CIV+PC+ +H W ++ + C I L + E E++
Sbjct: 55 RDYMHK---LEDAGAECIVIPCNTAHYWFKELKDACHIDILSIVETTINEVR-------- 103
Query: 213 AGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGAR 272
A RIG+LAT+ATL G YQ+ +++ GF V PD A + ++ +I +L ++ A+
Sbjct: 104 ACGKTRIGLLATNATLYMGLYQKGIESLGFTCVSPD-ADGQKKVMESIYSLKAGNIAHAQ 162
Query: 273 NLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDALARSTVTW 325
L+ ++L R +++G E+ +L K+ P + ID +L R+ + W
Sbjct: 163 KLMNEQAEILFSRGAEILVLGCTEIPVILAQAVKEQP--SRYIDSTASLVRAGIKW 216
>gi|421080749|ref|ZP_15541667.1| Aspartate racemase family protein [Pectobacterium wasabiae CFBP
3304]
gi|401704761|gb|EJS94966.1| Aspartate racemase family protein [Pectobacterium wasabiae CFBP
3304]
Length = 238
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 119/247 (48%), Gaps = 31/247 (12%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEE----LFHASVHSLKSK 140
+GI+GG+ +T++ + KL+ N PA ++ + S+ + +
Sbjct: 5 VGILGGMGPGATVDAMQKLIK---------------NTPAYRDQDHIPMIAVSIPDIPDR 49
Query: 141 T-VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
T L H + + L++ + LE AGA CI++PC+ +H W ++ + C + + +
Sbjct: 50 TQCILQHSASPLDKMLQYMK-ILENAGAECIIIPCNTAHYWFNELKQQCRAEMISIIDVT 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+ ++ A + R+G+LAT AT++A YQ+ L N E PD+A +H ++ +
Sbjct: 109 CQAIRNA--------NTTRVGLLATTATVTARIYQDNLINDDIECYTPDEAD-QHQVMES 159
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD-DPLLKKCIDPMDAL 318
I A ++ GA ++L LL V +I+G E+ +L ++ + +D + L
Sbjct: 160 IYAYKSGNIAGAYSMLSPVKDRLLQAGVEKIILGCTELPLILEQEVKTTPQYYVDATEEL 219
Query: 319 ARSTVTW 325
+ TV W
Sbjct: 220 IKKTVEW 226
>gi|365836247|ref|ZP_09377644.1| aspartate racemase [Hafnia alvei ATCC 51873]
gi|364564367|gb|EHM42135.1| aspartate racemase [Hafnia alvei ATCC 51873]
Length = 245
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 115/255 (45%), Gaps = 24/255 (9%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
+TIGI+GG+ ++T + L K V + A ++ P + C+ P + + S L
Sbjct: 3 HTIGILGGMGPAATADMLNKFVRFRHAGQDQQHIPIIACSIPDIPDR----SACLLSGGP 58
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
D+ L LE AGA CIV+PC+ +H W + +++ +
Sbjct: 59 SPYDY--------LERYLHMLETAGAECIVIPCNTAHYWFERLQHSAHAEMINILDATLA 110
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
EL A +G+LATDATL+ G YQ +L QG + +P+ + ++ I
Sbjct: 111 ELPRASQT---------VGLLATDATLATGLYQRRLDQQGRGLCVPE-GDGQSAVMQAIY 160
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALAR 320
A D+ ++ LL +Q L+ R + +I+G E+ ++ ++ ID AL R
Sbjct: 161 AYKAGDIALSQALLFPQVQALITRGADIIIMGCTEIPLIIGAEETRFDCGFIDSTAALVR 220
Query: 321 STVTWARSNKKLTLL 335
+ + W + T L
Sbjct: 221 AAIRWYEAKNGETTL 235
>gi|261821065|ref|YP_003259171.1| aspartate racemase [Pectobacterium wasabiae WPP163]
gi|261605078|gb|ACX87564.1| aspartate racemase [Pectobacterium wasabiae WPP163]
Length = 238
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 119/247 (48%), Gaps = 31/247 (12%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEE----LFHASVHSLKSK 140
+GI+GG+ +T++ + KL+ N PA ++ + S+ + +
Sbjct: 5 VGILGGMGPGATVDAMQKLIK---------------NTPAYRDQDHIPMIAVSIPDIPDR 49
Query: 141 T-VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
T L H + + L++ + LE AGA CI++PC+ +H W ++ + C + + +
Sbjct: 50 TQCILQHSASPLGKMLQYMK-ILENAGAECIIIPCNTAHYWFNELKQQCRAEMISIIDVT 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+ ++ A + R+G+LAT AT++A YQ+ L N E PD+A +H ++ +
Sbjct: 109 CQAIRSA--------NTTRVGLLATTATVTARIYQDNLINDNIECYTPDEAD-QHQVMES 159
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD-DPLLKKCIDPMDAL 318
I A ++ GA ++L LL V +I+G E+ +L ++ + +D + L
Sbjct: 160 IYAYKSGNIAGAYSMLSPVKDRLLQAGVEKIILGCTELPLILEQEIKTTPQHYVDATEEL 219
Query: 319 ARSTVTW 325
+ TV W
Sbjct: 220 IKKTVEW 226
>gi|227327191|ref|ZP_03831215.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 238
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 117/249 (46%), Gaps = 35/249 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEE----LFHASVHSLKSK 140
+GI+GG+ +T++ + KL+ N PA ++ + S+ + +
Sbjct: 5 VGILGGMGPGATVDAMQKLIK---------------NTPAYRDQDHIPMIAVSIPDIPDR 49
Query: 141 T-VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
T L H + + L++ + LE AGA CI++PC+ +H W D+ + C + + +
Sbjct: 50 TQCILQHSASPLDKMLQYMK-ILENAGAECIIIPCNTAHYWFNDLKQQCRAEMISIIDVT 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+ +K A + R+G+LAT AT+ A YQ+ L + PD A +H ++ +
Sbjct: 109 CQAIKHA--------NTTRVGLLATTATVKARIYQDNLITDNIDCYTPDDAD-QHQVMES 159
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD---DPLLKKCIDPMD 316
I A D+ GA +LL LL V +I+G E+ +L ++ P + +D +
Sbjct: 160 IYAYKSGDIAGAYSLLSPVKDRLLQAGVEKIILGCTELPLILEQEVRTSP--QHYVDATE 217
Query: 317 ALARSTVTW 325
L + TV W
Sbjct: 218 ELIKKTVEW 226
>gi|385871263|gb|AFI89783.1| Aspartate racemase [Pectobacterium sp. SCC3193]
Length = 238
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 119/247 (48%), Gaps = 31/247 (12%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEE----LFHASVHSLKSK 140
+GI+GG+ +T++ + KL+ N PA ++ + S+ + +
Sbjct: 5 VGILGGMGPGATVDAMQKLIK---------------NTPAYRDQDHIPMIAVSIPDIPDR 49
Query: 141 T-VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
T L H + + L++ + LE AGA CI++PC+ +H W ++ + C + + +
Sbjct: 50 TQCILQHSASPLGKMLQYMK-ILENAGAECIIIPCNTAHYWFNELKQQCRAEMISIIDVT 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+ ++ A + R+G+LAT AT++A YQ+ L N E PD+A +H ++ +
Sbjct: 109 CQAIRSA--------NTTRVGLLATTATVTARIYQDNLINDNIECYTPDEAD-QHQVMES 159
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD-DPLLKKCIDPMDAL 318
I A ++ GA ++L LL V +I+G E+ +L ++ + +D + L
Sbjct: 160 IYAYKSGNIAGAYSMLSPVKDRLLQAGVEKIILGCTELPLILEQEIKTTPQHYVDATEEL 219
Query: 319 ARSTVTW 325
+ TV W
Sbjct: 220 IKKTVEW 226
>gi|417844331|ref|ZP_12490375.1| Putative DNA-binding transcriptional regulator [Haemophilus
haemolyticus M21639]
gi|341956784|gb|EGT83200.1| Putative DNA-binding transcriptional regulator [Haemophilus
haemolyticus M21639]
Length = 230
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 127/253 (50%), Gaps = 31/253 (12%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
N IGI+GG+ ++T + K + ++ A +E P V+ +S+ + +T
Sbjct: 3 NIIGILGGMGPAATADMFQKFIQFTPAHCDQEHIPLVI------------SSIPDIPDRT 50
Query: 142 VQLDHIRGAVSQNL-RHKRAF-LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+ +RG S L +R + LE AGA+CI++ C+ +H W+ ++ E C + L++ +
Sbjct: 51 TSI--LRGGESPLLAMEERIYGLENAGAKCILIACNTAHYWYDELKEKCHVDMLNIIDST 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
E+ L+ G +IG+LATDATL+ YQ+ L+ G +LP++ + V + +
Sbjct: 109 INEV-------LQMGK-TKIGILATDATLATKLYQKTLEKYGLICLLPNEEHQKSV-MES 159
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMD 316
I +++ A L+ I L+ +I+G E+ +L ++ P L + D
Sbjct: 160 IYLYKSGEIQKAEELMLIQRDELIRYGAEVIILGCTEIPLILKNAMREQPTLYE--DSTA 217
Query: 317 ALARSTVTWARSN 329
AL R+ + W +++
Sbjct: 218 ALVRAAIRWYQTH 230
>gi|48243626|gb|AAT40775.1| putative aspartate racemase [Haemophilus influenzae]
Length = 230
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 124/251 (49%), Gaps = 27/251 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
N IGI+GG+ ++T + K + ++ A +E P V+ +S+ + +T
Sbjct: 3 NIIGILGGMGPAATADMFQKFIQFTPAHCDQEHIPLVI------------SSIPDIPDRT 50
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+ H + + + LE AGA+CI++ C+ +H W+ ++ E C + L++ +
Sbjct: 51 TSILHGGESPLLAMEERIYGLENAGAKCILIACNTAHYWYDELKEKCHVDMLNIIDSTIN 110
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
E+ L+ G +IG+LATDATL+ YQ+ L+ G +LP++ + V + +I
Sbjct: 111 EV-------LQMGK-TKIGILATDATLATKLYQKTLEKYGLICLLPNEEHQKSV-MESIY 161
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDAL 318
+++ A L+ I L+ +I+G E+ +L ++ P+L + D AL
Sbjct: 162 LYKSGEIQKAEELMLIQRDELIRHGSEVIILGCTEIPLILKNAMREQPILYE--DSTAAL 219
Query: 319 ARSTVTWARSN 329
R+ + W +++
Sbjct: 220 VRAAIRWYQTH 230
>gi|145631325|ref|ZP_01787097.1| predicted DNA-binding transcriptional regulator [Haemophilus
influenzae R3021]
gi|144983110|gb|EDJ90610.1| predicted DNA-binding transcriptional regulator [Haemophilus
influenzae R3021]
Length = 230
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 123/251 (49%), Gaps = 27/251 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
N IGI+GG+ ++T + K + ++ A +E P V+ +S+ + +T
Sbjct: 3 NIIGILGGMGPAATADMFQKFIQFTPAHCDQEHIPLVI------------SSIPDIPDRT 50
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+ H + + + LE AGA+CI++ C+ +H W+ ++ E C + L++ +
Sbjct: 51 TSILHGGESPLLAMEERIYGLENAGAKCILIACNTAHYWYDELKEKCHVDMLNIIDSTIN 110
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
E+ L+ G +IG+LATDATL+ YQ+ L+ G +LP++ + V + +I
Sbjct: 111 EV-------LQMGK-TKIGILATDATLATKLYQKTLEKYGLICLLPNEEHQKSV-MESIY 161
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDAL 318
+++ A L+ I L+ +I+G E+ +L ++ P L + D AL
Sbjct: 162 LYKSGEIQKAEELMLIQRDELIRHGAEVIILGCTEIPLILKNAMREQPTLYE--DSTAAL 219
Query: 319 ARSTVTWARSN 329
R+ + W +++
Sbjct: 220 VRAAIRWYQTH 230
>gi|423017595|ref|ZP_17008316.1| aspartate racemase family protein 2 [Achromobacter xylosoxidans
AXX-A]
gi|338779340|gb|EGP43786.1| aspartate racemase family protein 2 [Achromobacter xylosoxidans
AXX-A]
Length = 229
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIG 220
FLE+AGA+ I +PC+ +H W+ D++ P LH+ + V +L+ L G RIG
Sbjct: 57 FLERAGAQLIAIPCNTAHLWYDDIAAATERPVLHIIQAVIDDLRRLGLH-----QG-RIG 110
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQ 280
++ T ATL G YQ L+ QG+E ++PD +E + +I A+ +E A I
Sbjct: 111 LMGTAATLKLGLYQRHLEAQGYECIVPDDDEVERYCMASIRAVKGNQLEAAFAPAAECIA 170
Query: 281 LLLVRAVNAVIIGSDEMQGVLP 302
L R +AV++G E+ +P
Sbjct: 171 RLKARGADAVVLGCTELPLAVP 192
>gi|260582417|ref|ZP_05850209.1| aspartate racemase [Haemophilus influenzae NT127]
gi|260094568|gb|EEW78464.1| aspartate racemase [Haemophilus influenzae NT127]
Length = 230
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 123/251 (49%), Gaps = 27/251 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
N IGI+GG+ ++T + K + ++ A +E P V+ +S+ + +T
Sbjct: 3 NIIGILGGMGPAATADMFQKFIQFTPAHCDQEHIPLVI------------SSIPDIPDRT 50
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+ H + + + LE AGA+CI++ C+ +H W+ ++ E C + L++ +
Sbjct: 51 TSILHGGESPLLAMEERIYGLENAGAKCILIACNTAHYWYDELKEKCHVDMLNIIDSTIN 110
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
E+ L+ G +IG+LATDATL+ YQ+ L+ G +LP++ + V + +I
Sbjct: 111 EV-------LQMGK-TKIGILATDATLATKLYQKTLEKYGLICLLPNEEHQKSV-MESIY 161
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDAL 318
+++ A L+ I L+ +I+G E+ +L ++ P L + D AL
Sbjct: 162 LYKSGEIQKAEELMLIQRDELIRHGAEVIILGCTEIPLILKNAMREQPTLYE--DSTAAL 219
Query: 319 ARSTVTWARSN 329
R+ + W +++
Sbjct: 220 VRAAIHWYQTH 230
>gi|33603524|ref|NP_891084.1| aspartate/glutamate racemase [Bordetella bronchiseptica RB50]
gi|412341153|ref|YP_006969908.1| aspartate/glutamate racemase [Bordetella bronchiseptica 253]
gi|427816534|ref|ZP_18983598.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica
1289]
gi|33577648|emb|CAE34913.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica
RB50]
gi|408770987|emb|CCJ55786.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica
253]
gi|410567534|emb|CCN25105.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica
1289]
Length = 244
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 119/259 (45%), Gaps = 21/259 (8%)
Query: 74 SPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHA 132
S D + +G++GG+ + +F+ +LV + A ++ P ++ NDP + +
Sbjct: 3 SDDDTQFEGRFLGVLGGMGPMAGASFMQRLVALTEAACDQQHVPAILWNDPRVPDRPAGQ 62
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
S +RH LEQAGA I +PC+ +H W+ +++ S+P
Sbjct: 63 SGQGADPLPW------------MRHGIRRLEQAGAAAIAIPCNTAHVWYPQLAQSASVPV 110
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
LH+ E V +L+ + + AG R+G+LAT TL G YQ ++ QG+E V+P +
Sbjct: 111 LHIVEAVLDDLRR---QGIHAG---RVGLLATATTLRLGLYQHEMLAQGYEPVVPPVDLI 164
Query: 253 EHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK--DDPLLKK 310
+ + +I + + A I L V+A+++G E+ LP L
Sbjct: 165 DGLCAQSIRLVKQNLLPQALPPALACIDSLRAMGVDAIVLGCTELPLALPHALRAELGVA 224
Query: 311 CIDPMDALARSTVTWARSN 329
D +DALA + + W R
Sbjct: 225 MTDSIDALALAGLAWYRRG 243
>gi|197335438|ref|YP_002156361.1| aspartate racemase [Vibrio fischeri MJ11]
gi|197316928|gb|ACH66375.1| aspartate racemase [Vibrio fischeri MJ11]
Length = 236
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 120/248 (48%), Gaps = 23/248 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GI+GG+ +T+ F+ K++ + A + +E P VV + P + + H
Sbjct: 5 LGILGGMGPLATVEFMLKIISQTPAHNDQEHIPMVVSSVPQIPDRTAFIMGHGQDPYP-- 62
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L+H LEQ+GA CIV+PC+ +H W+ +S ++ + + + V +E
Sbjct: 63 ----------ELKHSFEQLEQSGAECIVIPCNTAHYWYPQLSATSNVHTISIIDSVVQEA 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ + K +G+LAT AT+ A YQ+KL +V+ D T + ++ I +
Sbjct: 113 QARRYK--------TVGLLATTATMKARMYQQKLNQYNIDVIETDD-TQQRDVMQGIYEV 163
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD-PLLKKCIDPMDALARST 322
++E + L+ + +L + AVI+G E+ L + + ++C+D ++ LA+
Sbjct: 164 KAGNVEKGKALMLPVFKSMLAQGAEAVILGCTEIPVALAEQNLKQPQQCLDSLEILAKCC 223
Query: 323 VTWARSNK 330
V W+ +
Sbjct: 224 VDWSYEEQ 231
>gi|54309523|ref|YP_130543.1| aspartate racemase [Photobacterium profundum SS9]
gi|46913959|emb|CAG20741.1| hypothetical aspartate racemase [Photobacterium profundum SS9]
Length = 226
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 112/237 (47%), Gaps = 23/237 (9%)
Query: 95 STLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQLDHIRGAVSQ 153
+T+ F+ K++ + A + ++ P +V N+P + +T L
Sbjct: 5 ATVEFMQKIISRTPAHNDQQHIPMLVSNNP------------QIPDRTAYLISNGEDPYP 52
Query: 154 NLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEA 213
L+ L+QAGA CIVMPC+ +H W+ ++ C++ + + + V E K + +
Sbjct: 53 ALKEGMEQLQQAGAECIVMPCNTAHYWYTRLTNSCNVHTISIIDSVVDEAKHRRYR---- 108
Query: 214 GSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARN 273
+G+LAT AT+ AG YQ KL Q + + + I+ I A+ ++E +
Sbjct: 109 ----TVGLLATTATMMAGMYQTKLAQQQINAIETTDSE-QQAIMNGIYAVKAGNVEHGKQ 163
Query: 274 LLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD-PLLKKCIDPMDALARSTVTWARSN 329
L++ + +L R AVI G E+ L + + C+D +D LA V WA+++
Sbjct: 164 LMQPVFEAMLNRGAEAVIFGCTEIPVALAEQTISQPQHCLDSLDILAEQCVHWAQAD 220
>gi|50120438|ref|YP_049605.1| aspartate racemase [Pectobacterium atrosepticum SCRI1043]
gi|49610964|emb|CAG74409.1| probable aspartate racemase [Pectobacterium atrosepticum SCRI1043]
Length = 238
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 31/247 (12%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEE----LFHASVHSLKSK 140
+GI+GG+ +T++ + KL+ N PA ++ + S+ + +
Sbjct: 5 VGILGGMGPGATVDAMQKLIK---------------NTPAYRDQDHIPMIAVSIPDIPDR 49
Query: 141 T-VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
T L H + + L++ + LE AGA CI++PC+ +H W ++ + CS + + +
Sbjct: 50 TQCILQHSASPLGKMLQYMK-ILENAGAECIIIPCNTAHYWFNELKQQCSAEMISIIDVT 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+ ++ + R+G+LAT AT+ A YQ+ L E PD A +H ++ +
Sbjct: 109 CQAIRNT--------NTTRVGLLATTATVKARIYQDNLITDNIECYTPDDAD-QHQVMES 159
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL-KKCIDPMDAL 318
I A D+ GA ++L LL V +I+G E+ +L ++ + + +D + L
Sbjct: 160 IYAYKSGDIAGAYSMLSPVKDRLLQAGVEKIILGCTELPLILEQEVRISPQHYVDATEEL 219
Query: 319 ARSTVTW 325
+ TV W
Sbjct: 220 IKKTVEW 226
>gi|410473216|ref|YP_006896497.1| aspartate racemase [Bordetella parapertussis Bpp5]
gi|408443326|emb|CCJ49971.1| putative aspartate racemase [Bordetella parapertussis Bpp5]
Length = 247
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 95/175 (54%), Gaps = 12/175 (6%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSE--GCSIPFLHVGECVAKELKEAKLKPLEAGSGVR 218
FL +AGAR I +PC+ +H W+ ++ GC++ LH+ E VA++L+ L G R
Sbjct: 75 FLREAGARLIAIPCNTAHLWYEPLAAVAGCTV--LHIIEAVAQDLRRQGLH------GGR 126
Query: 219 IGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIG 278
IG++ T ATL+ G YQ+ LQ QG+ ++P+ +E + +I A+ ++ A
Sbjct: 127 IGLMGTSATLALGLYQQTLQRQGYSCIIPEPDEVERYCMGSIRAVKANRLDLAYEPAAEC 186
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKD-DPLLK-KCIDPMDALARSTVTWARSNKK 331
I L R +AV++G E+ +P P L + D +DALA + + ++++
Sbjct: 187 IARLKARGADAVVLGCTELPLAVPHALRPGLGIRLTDSIDALALAAIEHYEADQQ 241
>gi|33597484|ref|NP_885127.1| aspartate racemase [Bordetella parapertussis 12822]
gi|33601880|ref|NP_889440.1| aspartate racemase [Bordetella bronchiseptica RB50]
gi|412338033|ref|YP_006966788.1| aspartate racemase [Bordetella bronchiseptica 253]
gi|427814492|ref|ZP_18981556.1| putative aspartate racemase [Bordetella bronchiseptica 1289]
gi|427818883|ref|ZP_18985946.1| putative aspartate racemase [Bordetella bronchiseptica D445]
gi|427822492|ref|ZP_18989554.1| putative aspartate racemase [Bordetella bronchiseptica Bbr77]
gi|33573912|emb|CAE38228.1| putative aspartate racemase [Bordetella parapertussis]
gi|33576317|emb|CAE33396.1| putative aspartate racemase [Bordetella bronchiseptica RB50]
gi|408767867|emb|CCJ52624.1| putative aspartate racemase [Bordetella bronchiseptica 253]
gi|410565492|emb|CCN23049.1| putative aspartate racemase [Bordetella bronchiseptica 1289]
gi|410569883|emb|CCN18006.1| putative aspartate racemase [Bordetella bronchiseptica D445]
gi|410587757|emb|CCN02805.1| putative aspartate racemase [Bordetella bronchiseptica Bbr77]
Length = 247
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 95/175 (54%), Gaps = 12/175 (6%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSE--GCSIPFLHVGECVAKELKEAKLKPLEAGSGVR 218
FL +AGAR I +PC+ +H W+ ++ GC++ LH+ E VA++L+ L G R
Sbjct: 75 FLREAGARLIAIPCNTAHLWYEPLAAVAGCTV--LHIIEAVAQDLRRQGLH------GGR 126
Query: 219 IGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIG 278
IG++ T ATL+ G YQ+ LQ QG+ ++P+ +E + +I A+ ++ A
Sbjct: 127 IGLMGTSATLALGLYQQTLQRQGYSCIIPEPDEVERYCMGSIRAVKANRLDLAYEPAAEC 186
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKD-DPLLK-KCIDPMDALARSTVTWARSNKK 331
I L R +AV++G E+ +P P L + D +DALA + + ++++
Sbjct: 187 IARLKARGADAVVLGCTELPLAVPHALRPGLGIRLTDSIDALALAAIEHYEADQQ 241
>gi|427820029|ref|ZP_18987092.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica
D445]
gi|427822618|ref|ZP_18989680.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica
Bbr77]
gi|410571029|emb|CCN19237.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica
D445]
gi|410587883|emb|CCN02931.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica
Bbr77]
Length = 244
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 117/252 (46%), Gaps = 21/252 (8%)
Query: 81 QANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
+ +G++GG+ + +F+ +LV + A ++ P ++ NDP + + S
Sbjct: 10 EGRFLGVLGGMGPMAGASFMQRLVALTEAACDQQHVPAILWNDPRVPDRPAGQSGQGADP 69
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+RH LEQAGA I +PC+ +H W+ +++ S+P LH+ E V
Sbjct: 70 LPW------------MRHGIRRLEQAGAAAIAIPCNTAHVWYPQLAQSASVPVLHIVEAV 117
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+L+ + + AG R+G+LAT TL G YQ ++ QG+E V+P ++ + +
Sbjct: 118 LDDLRR---QGIHAG---RVGLLATATTLRLGLYQHEMLAQGYEPVVPPVDLIDGLCAQS 171
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK--DDPLLKKCIDPMDA 317
I + + A I L V+A+++G E+ LP L D +DA
Sbjct: 172 IRLVKQNLLPQALPPALACIDSLRAMGVDAIVLGCTELPLALPHALRAELGVAMTDSIDA 231
Query: 318 LARSTVTWARSN 329
LA + + W R
Sbjct: 232 LALAGLAWYRRG 243
>gi|33591318|ref|NP_878962.1| aspartate/glutamate racemase [Bordetella pertussis Tohama I]
gi|384202606|ref|YP_005588345.1| putative aspartate/glutamate racemase [Bordetella pertussis CS]
gi|408416984|ref|YP_006627691.1| aspartate/glutamate racemase [Bordetella pertussis 18323]
gi|33570960|emb|CAE40431.1| putative aspartate/glutamate racemase [Bordetella pertussis Tohama
I]
gi|332380720|gb|AEE65567.1| putative aspartate/glutamate racemase [Bordetella pertussis CS]
gi|401779154|emb|CCJ64641.1| putative aspartate/glutamate racemase [Bordetella pertussis 18323]
Length = 244
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 117/252 (46%), Gaps = 21/252 (8%)
Query: 81 QANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
+ +G++GG+ + +F+ +LV + A ++ P ++ NDP + + S
Sbjct: 10 EGRFLGVLGGMGPMAGASFMQRLVALTEAACDQQHVPAILWNDPRVPDRPAGQSGQGADP 69
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+RH LEQAGA I +PC+ +H W+ +++ S+P LH+ E V
Sbjct: 70 LPW------------MRHGIRRLEQAGATAIAIPCNTAHVWYPQLAQSASVPVLHIVEAV 117
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+L+ + + AG R+G+LAT TL G YQ ++ QG+E V+P ++ + +
Sbjct: 118 LDDLRR---QGIHAG---RVGLLATATTLRLGLYQHEMLAQGYEPVVPPVDLIDGLCAQS 171
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK--DDPLLKKCIDPMDA 317
I + + A I L V+A+++G E+ LP L D +DA
Sbjct: 172 IRLVKQNLLPQALPPALACIDSLRAMGVDAIVLGCTELPLALPHALRAELGVAMTDSIDA 231
Query: 318 LARSTVTWARSN 329
LA + + W R
Sbjct: 232 LALAGLGWYRRG 243
>gi|410420028|ref|YP_006900477.1| aspartate racemase [Bordetella bronchiseptica MO149]
gi|408447323|emb|CCJ58996.1| putative aspartate racemase [Bordetella bronchiseptica MO149]
Length = 247
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 95/175 (54%), Gaps = 12/175 (6%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSE--GCSIPFLHVGECVAKELKEAKLKPLEAGSGVR 218
FL +AGAR I +PC+ +H W+ ++ GC++ LH+ E VA++L+ L G R
Sbjct: 75 FLREAGARLIAIPCNTAHLWYEPLAAVAGCTV--LHIIEAVAQDLRRQGLH------GGR 126
Query: 219 IGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIG 278
IG++ T ATL+ G YQ+ LQ QG+ ++P+ +E + +I A+ ++ A
Sbjct: 127 IGLMGTSATLALGLYQQTLQRQGYSCIIPEPDEVERYCMGSIRAVKANRLDLAYEPAAEC 186
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKD-DPLLK-KCIDPMDALARSTVTWARSNKK 331
I L R +AV++G E+ +P P L + D +DALA + + ++++
Sbjct: 187 IARLNARGADAVVLGCTELPLAVPHALRPGLGIRLTDSIDALALAAIEHYEADQQ 241
>gi|423686316|ref|ZP_17661124.1| aspartate racemase [Vibrio fischeri SR5]
gi|371494384|gb|EHN69982.1| aspartate racemase [Vibrio fischeri SR5]
Length = 236
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 119/248 (47%), Gaps = 23/248 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GI+GG+ +T+ F+ K++ + A + +E P VV + P + + H
Sbjct: 5 LGILGGMGPLATVEFMLKIISQTPAHNDQEHIPMVVSSVPQIPDRTAFIMGHGQDPYP-- 62
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L+H LEQ+GA CIV+PC+ +H W+ +S + + + + V +E
Sbjct: 63 ----------ELKHSFEQLEQSGAECIVIPCNTAHYWYPQLSATSHVHTISIIDSVVQEA 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ + K +G+LAT AT+ A YQ+KL EV+ D T + ++ I +
Sbjct: 113 QTRRYK--------TVGLLATTATMKARMYQQKLNQYHIEVIETDD-TQQCDVMQGIYEV 163
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD-PLLKKCIDPMDALARST 322
++E + L+ + +L + AVI+G E+ L + + ++C+D ++ LA+
Sbjct: 164 KAGNVEKGKALMLPVFESMLAQGAEAVILGCTEIPVALAEQNLKQPQQCLDSLEILAKCC 223
Query: 323 VTWARSNK 330
V W+ +
Sbjct: 224 VDWSYEEQ 231
>gi|91790218|ref|YP_551170.1| aspartate racemase [Polaromonas sp. JS666]
gi|91699443|gb|ABE46272.1| aspartate racemase [Polaromonas sp. JS666]
Length = 241
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 19/217 (8%)
Query: 82 ANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
A +G++GG+ ++ F +L + + +E P ++ NDP + + A L
Sbjct: 2 APMLGVLGGMGPAAGAYFAYRLALLTDVQSDQEHLPVLLINDPKIPDRSEFALGRGLSPM 61
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
A+ +NL+ FLE +G C V+PC+ +H W+ D+ +P +H+ V
Sbjct: 62 P--------AMRRNLQ----FLESSGCSCAVIPCNTAHYWYPDLQMSVKMPLIHIVSSVV 109
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ L + G RIG+L T AT+++G Y++KL N G+ V+ + + + + I
Sbjct: 110 ENLHARGI------DGGRIGLLGTPATVNSGLYKDKLTNAGYTVLPYTEDDVLQLCVRPI 163
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
+A+ + A L +++L R AVI+G E+
Sbjct: 164 QAVKQNRLREAGTALADSVRVLYDRGATAVILGCTEL 200
>gi|158428132|pdb|2DX7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Ot3 Aspartate
Racemase Complex With Citric Acid
gi|158428133|pdb|2DX7|B Chain B, Crystal Structure Of Pyrococcus Horikoshii Ot3 Aspartate
Racemase Complex With Citric Acid
Length = 228
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 119/249 (47%), Gaps = 30/249 (12%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
TIGI+GG+ +T ++V + AK +E P ++ N+P + +
Sbjct: 2 KTIGILGGMGPLATAELFRRIVIKTPAKRDQEHPKVIIFNNPQIPD-------------- 47
Query: 142 VQLDHIRGAVSQNLRHKRAF----LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
+ +I G ++ R + + LE+ GA I+MP + +HA+ D+ + IP + + E
Sbjct: 48 -RTAYILGK-GEDPRPQLIWTAKRLEECGADFIIMPANTAHAFVEDIRKAIKIPIISMIE 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
AK++KE K + G+LAT T+ +G Y+++ G E++ P + + V+
Sbjct: 106 ETAKKVKELGFK--------KAGLLATTGTIVSGVYEKEFSKYGVEIMTPTEDEQKDVMR 157
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
E + +++ R LL ++L R +I G E+ VL +DD L IDPMD
Sbjct: 158 GIYEGVKAGNLKLGRELLLKTAKILEERGAECIIAGCTEVSVVLKQDD-LKVPLIDPMDV 216
Query: 318 LARSTVTWA 326
+A V A
Sbjct: 217 IAEVAVKVA 225
>gi|410422000|ref|YP_006902449.1| aspartate/glutamate racemase [Bordetella bronchiseptica MO149]
gi|408449295|emb|CCJ60983.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica
MO149]
Length = 244
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 117/252 (46%), Gaps = 21/252 (8%)
Query: 81 QANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
+ +G++GG+ + +F+ +LV + A ++ P ++ NDP + + S
Sbjct: 10 EGRFLGVLGGMGPMAGASFMQRLVALTEAACDQQHVPAILWNDPRVPDRPAGQSGQGADP 69
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+RH LEQAGA I +PC+ +H W+ +++ ++P LH+ E V
Sbjct: 70 LPW------------MRHGIRRLEQAGAAAIAIPCNTAHVWYPQLAQSANVPVLHIVEAV 117
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+L+ + + AG R+G+LAT TL G YQ ++ QG+E V+P ++ + +
Sbjct: 118 LDDLRR---QGIHAG---RVGLLATATTLRLGLYQHEMLAQGYEPVVPPVDLIDGLCAQS 171
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK--DDPLLKKCIDPMDA 317
I + + A I L V+A+++G E+ LP L D +DA
Sbjct: 172 IRLVKQNLLPQALPPALACIDSLRAMGVDAIVLGCTELPLALPHALRAELGVAMTDSIDA 231
Query: 318 LARSTVTWARSN 329
LA + + W R
Sbjct: 232 LALAGLAWYRRG 243
>gi|410474606|ref|YP_006897887.1| aspartate/glutamate racemase [Bordetella parapertussis Bpp5]
gi|408444716|emb|CCJ51484.1| putative aspartate/glutamate racemase [Bordetella parapertussis
Bpp5]
Length = 244
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 21/257 (8%)
Query: 74 SPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHA 132
S D + +G++GG+ + +F+ +LV + A ++ P ++ NDP + +
Sbjct: 3 SDDDTQFEGRFLGVLGGMGPMAGASFMQRLVALTEAACDQQHVPAILWNDPRVPDRPAGQ 62
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
S +RH LEQAGA I +PC+ +H W+ +++ ++P
Sbjct: 63 SGQGADPLPW------------MRHGIRRLEQAGAAAIAIPCNTAHVWYPQLAQSANVPV 110
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
LH+ E V L + + + + AG R+G+LAT TL G YQ ++ QG+E V+P +
Sbjct: 111 LHIVEAV---LDDLRCQGIHAG---RVGLLATATTLRLGLYQHEMLAQGYEPVVPPVDLI 164
Query: 253 EHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK--DDPLLKK 310
+ + +I + + A I L V+A+++G E+ LP L
Sbjct: 165 DGLCAQSIRLVKQNLLPQALPPALACIDSLRAMGVDAIVLGCTELPLALPHALRAELGVA 224
Query: 311 CIDPMDALARSTVTWAR 327
D +DALA + + W R
Sbjct: 225 MTDSIDALALAGLAWYR 241
>gi|441502376|ref|ZP_20984387.1| Aspartate racemase [Photobacterium sp. AK15]
gi|441430123|gb|ELR67574.1| Aspartate racemase [Photobacterium sp. AK15]
Length = 236
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 124/249 (49%), Gaps = 27/249 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GI+GG+ +T+ F+ K++ + A + ++ P +V N+P + + + + L
Sbjct: 5 LGILGGMGPLATVEFMQKIIARTPAHNDQQHIPMLVSNNPQIPDR----TAYILGEGQDP 60
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
++ + Q L+ AGA CIV+PC+ +H W+ ++ + + + + V E
Sbjct: 61 FPVLKQGMEQ--------LQNAGAECIVIPCNTAHYWYPRLTRCSKVHMISIIDSVVDEA 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
++ + + ++GV+AT AT+ YQ KL + + + PD+ + ++ I A+
Sbjct: 113 RQRQYR--------KVGVMATSATMMTRMYQTKLAQKQIDAIEPDEGA-QLAVMEGIYAV 163
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK---DDPLLKKCIDPMDALAR 320
++E + L+ + LL + AVI G E+ L + + P + C+D +D LA+
Sbjct: 164 KAGEVERGKQLMLPVFRNLLEQGAEAVIFGCTEIPVALAEQAIEQP--EACLDSLDILAQ 221
Query: 321 STVTWARSN 329
+ WA+++
Sbjct: 222 QCIEWAQAD 230
>gi|253687770|ref|YP_003016960.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251754348|gb|ACT12424.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 238
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 35/249 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEE----LFHASVHSLKSK 140
+GI+GG+ +T++ + KL+ N PA ++ + S+ + +
Sbjct: 5 VGILGGMGPGATVDAMQKLIK---------------NTPAYRDQDHIPMIAVSIPDIPDR 49
Query: 141 T-VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
T L H + + L++ + LE AGA CI++PC+ +H W ++ + C + + +
Sbjct: 50 TKCILQHSASPLEKMLQYMK-ILENAGAECIIIPCNTAHYWFNELKQQCRAEMISIIDVT 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+ +K A + R+G+LAT AT+ A YQ+ L E P+ A +H ++ +
Sbjct: 109 CQAIKHA--------NTTRVGLLATTATVKARIYQDNLITDNIECFTPNDAD-QHQVMES 159
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMD 316
I A D+ GA +L LL V +I+G E+ +L K P + +D +
Sbjct: 160 IYAYKSGDIAGAYRMLSPVKDRLLHAGVEKIILGCTELPLILEQEVKTSP--QHYVDATE 217
Query: 317 ALARSTVTW 325
L + TV W
Sbjct: 218 ELIKKTVEW 226
>gi|423614408|ref|ZP_17590266.1| aspartate racemase [Bacillus cereus VD107]
gi|401238529|gb|EJR44969.1| aspartate racemase [Bacillus cereus VD107]
Length = 234
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 112/254 (44%), Gaps = 36/254 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
+GIIGG+ +T++ + K+++Y+ PA+ ++ +H + Q+
Sbjct: 5 VGIIGGMGPLATVDLMNKIIFYT---------------PAMKDQ---DHIHVIADNYSQI 46
Query: 145 DHIRGAV-------SQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
A+ + + L AGA +V+ C+ +H + G V + S+P LH+
Sbjct: 47 PDRTTAILGKGIDPTPYIIQSAQRLHNAGADFLVIACNTAHFFFGSVEKSVSVPILHMPA 106
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
AK L+E K ++G+LATD T++ YQ+ QN EV+ PD M+ ++
Sbjct: 107 ETAKFLQENNFK--------KVGLLATDGTINTNLYQQSCQNYDIEVIEPD-VEMQKEVM 157
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I A+ D+E L L R A+I G E+ VL + IDP +
Sbjct: 158 KGIYAIKSGDLETGLLCLSTVANKLTKRGAEAIIAGCTEVPLVLKSSKDIC--VIDPTEI 215
Query: 318 LARSTVTWARSNKK 331
LA+ + A K
Sbjct: 216 LAKMVIKTANGTDK 229
>gi|33598574|ref|NP_886217.1| aspartate/glutamate racemase [Bordetella parapertussis 12822]
gi|33574703|emb|CAE39360.1| putative aspartate/glutamate racemase [Bordetella parapertussis]
Length = 244
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 118/259 (45%), Gaps = 21/259 (8%)
Query: 74 SPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHA 132
S D + +G++G + + +F+ +LV + A ++ P ++ NDP + +
Sbjct: 3 SDDDTQFEGRFLGVLGSMGPMAGASFMQRLVALTEAACDQQHVPAILWNDPRVPDRPAGQ 62
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
S +RH LEQAGA I +PC+ +H W+ +++ S+P
Sbjct: 63 SGQGADPLPW------------MRHGIRRLEQAGAAAIAIPCNTAHVWYPQLAQSASVPV 110
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
LH+ E V +L+ + + AG R+G+LAT TL G YQ ++ QG+E V+P +
Sbjct: 111 LHIVEAVLDDLRR---QGIHAG---RVGLLATATTLRLGLYQHEMLAQGYEPVVPPVDLI 164
Query: 253 EHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK--DDPLLKK 310
+ + +I + + A I L V+A+++G E+ LP L
Sbjct: 165 DGLCAQSIRLVKQNLLPQALPPALACIDSLRAMGVDAIVLGCTELPLALPHALRAELGVA 224
Query: 311 CIDPMDALARSTVTWARSN 329
D +DALA + + W R
Sbjct: 225 MTDSIDALALAGLAWYRRG 243
>gi|311281614|ref|YP_003943845.1| aspartate racemase [Enterobacter cloacae SCF1]
gi|308750809|gb|ADO50561.1| aspartate racemase [Enterobacter cloacae SCF1]
Length = 244
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 30/251 (11%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWY--SAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG+ ++T + L K V ++ D + P L +S+ + +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVALRRASCDQQHIP-------------LIVSSIPDIPDR 49
Query: 141 TVQLDHIRGAVS--QNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
T L + G S +L LE AGA CIV+PC+ +H W D+ + + +
Sbjct: 50 TACL--LSGGPSPFHSLEQYLHMLEAAGAECIVIPCNTAHYWFEDLQAVAKVEMISI--- 104
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIP 258
+A L + G +G+LATDATL+A YQ+K +G ++ P++ V +
Sbjct: 105 -----LDATLNAIPDGVSC-VGLLATDATLAARLYQDKAAARGMTLIQPEREEQAQV-MQ 157
Query: 259 TIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP-KDDPLLKKCIDPMDA 317
I AL D A LL I+ L R A+I+G E+ ++ +D + +D +
Sbjct: 158 AIYALKRGDKTAAEALLLPQIRQLAARGAQAIIMGCTEIPLIVAGHEDAFSCRFVDSTAS 217
Query: 318 LARSTVTWARS 328
L R+ + W S
Sbjct: 218 LVRAAIRWYES 228
>gi|271501156|ref|YP_003334181.1| aspartate racemase [Dickeya dadantii Ech586]
gi|270344711|gb|ACZ77476.1| aspartate racemase [Dickeya dadantii Ech586]
Length = 238
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 115/243 (47%), Gaps = 23/243 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IGI+GG+ +T++ + KL+ + A+ +E P + + P + + +++ +
Sbjct: 5 IGILGGMGPGATVDAMQKLIRQTPARKDQEHIPMIAVSIPDIPD----------RTQCI- 53
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L+H + + + + R LE AGA CI++PC+ +H W D+ + + + + +++
Sbjct: 54 LNHSPSPLKKMIEYMR-ILENAGATCIIIPCNTAHYWFEDLKRHTQVDMISIIDAACQQV 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
E ++ +G+LAT AT+ YQ L Q LPD A + ++ +I A
Sbjct: 113 AEQRVH--------HVGILATTATVRGNIYQHALSGQQVRSTLPDDA-QQQAVMNSIYAY 163
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD-DPLLKKCIDPMDALARST 322
D +R LL + L + V +I+G E+ +L + +D DAL + T
Sbjct: 164 KAGDFSQSRALLLPVVDSLRQQGVEKIILGCTELPLILEAEVSATPDAYLDATDALIKQT 223
Query: 323 VTW 325
+ W
Sbjct: 224 IAW 226
>gi|403057843|ref|YP_006646060.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402805169|gb|AFR02807.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
Length = 228
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 15/185 (8%)
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L H + + L++ + LE AGA CI++PC+ +H W D+ + C + + + + +
Sbjct: 44 LQHSASPLDKMLQYMK-ILENAGAECIIIPCNTAHYWFNDLKKQCRAEMISIIDVTCQAI 102
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
K A + R+G+LAT AT+ A YQ+ L E PD A +H ++ +I A
Sbjct: 103 KHA--------NTTRVGLLATTATVKARIYQDNLITDNIECYTPDDAD-QHQVMESIYAY 153
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDALAR 320
D++ A NLL LL V +I+G E+ +L K P + +D + L +
Sbjct: 154 KSGDIDRAYNLLSPVKDRLLQAGVEKIILGCTELPLILEQEVKTSP--QHYVDATEELIK 211
Query: 321 STVTW 325
TV W
Sbjct: 212 KTVEW 216
>gi|18977352|ref|NP_578709.1| aspartate racemase [Pyrococcus furiosus DSM 3638]
gi|397651486|ref|YP_006492067.1| aspartate racemase [Pyrococcus furiosus COM1]
gi|18893031|gb|AAL81104.1| putative aspartate racemase [Pyrococcus furiosus DSM 3638]
gi|393189077|gb|AFN03775.1| aspartate racemase [Pyrococcus furiosus COM1]
Length = 228
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 22/245 (8%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
IGI+GG+ +T+ ++V + AK ++ P ++ N+P + + + +
Sbjct: 2 KVIGILGGMGPLATVELFKRIVEKTPAKRDQDHPKIIIYNNPQIPDRTAYILGRGEDPRP 61
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
L LE+ GA IVMPC+ +HA+ D+ IP + + E AK
Sbjct: 62 ------------QLIWTAKKLEKCGADFIVMPCNTAHAFIDDIRREVGIPVISMIEETAK 109
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
+ +K + G+LAT T+ +G Y ++L+ G E++ P + E V+ E
Sbjct: 110 RIASLGIK--------KAGLLATTGTIVSGVYHKELEKYGLEILTPTEEEQELVMKGIYE 161
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARS 321
+ +++ RNLL ++L R A+I G E+ V+ + D L IDPM+ +A
Sbjct: 162 GVKAGNLDLGRNLLLQIARILEERGAEAIIAGCTEVSVVIKESD-LRVMLIDPMNVIAEV 220
Query: 322 TVTWA 326
V A
Sbjct: 221 AVKMA 225
>gi|343496243|ref|ZP_08734346.1| aspartate racemase [Vibrio nigripulchritudo ATCC 27043]
gi|342821490|gb|EGU56264.1| aspartate racemase [Vibrio nigripulchritudo ATCC 27043]
Length = 231
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 117/246 (47%), Gaps = 23/246 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IG++GG+ +T F+ K++ + A+ +E P ++ N P + +T
Sbjct: 5 IGVLGGMGPLATAEFMKKVIMKTPAQFDQEHIPMLIRNVP------------QVPDRTNY 52
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L L H L +AGA CIV+PC+ +H W+ ++ G + + + E V ++
Sbjct: 53 LMGFGSDPFAALNHGFGELLKAGATCIVIPCNTAHHWYERLTRGKRVHTISIIESVVEQA 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ + +G+LATDAT+ YQ L+ G + ++P + + ++ I+A+
Sbjct: 113 VSREYQ--------CVGILATDATIQTNLYQSALEQHGIKAIVPGQ-LQQASVMEGIKAV 163
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK-DDPLLKKCIDPMDALARST 322
D+ A N++ ++ +AVI G E+ L K + +KC+D + LA+
Sbjct: 164 KAGDLNIATNIIEPVFDDMVKHGADAVIFGCTEIPVALEKIEQKAPEKCLDSLGILAQKC 223
Query: 323 VTWARS 328
V WA+S
Sbjct: 224 VLWAKS 229
>gi|422014636|ref|ZP_16361246.1| aspartate racemase [Providencia burhodogranariea DSM 19968]
gi|414100856|gb|EKT62467.1| aspartate racemase [Providencia burhodogranariea DSM 19968]
Length = 246
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 90/179 (50%), Gaps = 14/179 (7%)
Query: 150 AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLK 209
A+ ++LR LE AG CI+MPC+ +H W+ ++ + SIPF+ + + ++ + +K
Sbjct: 63 AMIESLR----ILESAGVSCIIMPCNTAHYWYEELKKSVSIPFISIIDSACNKIIKENIK 118
Query: 210 PLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDME 269
+ +LAT AT+ AG YQ KL + ++PD ++ I+ +I A D
Sbjct: 119 --------SVALLATTATIEAGLYQHKLAENNIKCLIPDDIE-QYKIMKSIIAYKAGDFH 169
Query: 270 GARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK-DDPLLKKCIDPMDALARSTVTWAR 327
A+ ++ + L + +N ++G E+ +L +K ID D L + T+ W +
Sbjct: 170 SAQEIMLSCVSKLEEKGINKFVMGCTEIPLILKNISRQYPEKFIDATDELIKETINWYQ 228
>gi|1545809|dbj|BAA12209.1| aspartate racemase [Desulfurococcus sp. SY]
Length = 235
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 23/245 (9%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
IGI+GG+ +T ++V + AK +E P ++ N+P + + + +
Sbjct: 4 RVIGILGGMGPLATAELFRRIVEKTPAKRDQEHPRIIIYNNPKIPDRTAYILGRGEDPRP 63
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
++ R LE GA I+MPC+ +H + D+ + IP + + E A+
Sbjct: 64 ELINSARK------------LESWGADFIIMPCNTAHFFAEDIQKAIRIPLVSMVEETAE 111
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
+KE L+ ++G+LATD T+ Y L +G +V PD+ E V+
Sbjct: 112 RVKEMGLR--------KVGLLATDGTIKGLVYHRALLKRGIAIVTPDRTGQELVMEGIYR 163
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARS 321
+ ++ R LL + + L + V+ +I G E+ L DD L IDPMD +A
Sbjct: 164 GVKAGNVAYGRELL-LRVAKKLEKRVDGIIAGCTEVSVALKPDD-LSVPLIDPMDVIAEK 221
Query: 322 TVTWA 326
+V A
Sbjct: 222 SVKLA 226
>gi|59712154|ref|YP_204930.1| aspartate racemase [Vibrio fischeri ES114]
gi|59480255|gb|AAW86042.1| aspartate racemase [Vibrio fischeri ES114]
Length = 236
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 117/248 (47%), Gaps = 23/248 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GI+GG+ +T+ F+ K++ + A + +E P VV + P + + H
Sbjct: 5 LGILGGMGPLATVEFMLKIISQTPAHNDQEHIPMVVSSVPQIPDRTAFIMGHGQDPYP-- 62
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L+H LE++GA CIV+PC+ +H W+ +S + + + + V +E
Sbjct: 63 ----------ELKHSFEQLERSGAECIVIPCNTAHYWYPQLSATSHVHTISIIDSVVQEA 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ + K +G+LAT AT+ A YQ+KL EV+ D V + I +
Sbjct: 113 QNRRYK--------TVGLLATTATMKARMYQQKLNQYHIEVIETDDIQQRDV-MQGIYEV 163
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD-PLLKKCIDPMDALARST 322
++E + L+ + +L + AVI+G E+ L + + ++C+D ++ LA+
Sbjct: 164 KAGNVEKGKALMLPVFESMLAQGAEAVILGCTEIPVALAEQNLKQPQQCLDSLEILAKCC 223
Query: 323 VTWARSNK 330
V W+ +
Sbjct: 224 VDWSYEEQ 231
>gi|423143009|ref|ZP_17130647.1| aspartate racemase [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
gi|379049600|gb|EHY67495.1| aspartate racemase [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
Length = 244
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 119/249 (47%), Gaps = 26/249 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG+ ++T + L K V +++ D + P L +S+ + +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIP-------------LIVSSIPDIPDR 49
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
T L + + L LE AGA CIV+PC+ +H W D+ +V +
Sbjct: 50 TACLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARM 101
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ +A L+ + S IG+LAT+ATL+ G YQ+K G ++ P++A + +++ I
Sbjct: 102 ISILDATLEDIPP-SARHIGLLATNATLATGLYQKKALAHGLTLIQPEEAG-QALVMQAI 159
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALA 319
A D A+ LL I L+ R A+I+G E+ ++ + + + ID +L
Sbjct: 160 YARKRGDKPAAQALLLPQIDRLIARGAQAIIMGCTEIPLIVAEHEGAIACPMIDSTASLV 219
Query: 320 RSTVTWARS 328
R+ + W S
Sbjct: 220 RAAIRWYES 228
>gi|209695461|ref|YP_002263390.1| aspartate racemase [Aliivibrio salmonicida LFI1238]
gi|208009413|emb|CAQ79689.1| aspartate racemase [Aliivibrio salmonicida LFI1238]
Length = 237
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 27/254 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GI+GG+ +T+ F+ K++ + A + +E P VV + P + + H
Sbjct: 5 LGILGGMGPLATVEFMMKIITQTPAHNDQEHIPMVVSSVPQIPDRTAFIMGHGTDPYP-- 62
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L+H LEQ+GA CIV+PC+ +H W+ +S + + + + V +E
Sbjct: 63 ----------ELKHSFDQLEQSGAECIVIPCNTAHYWYPQLSATSHVHTISIIDSVVQET 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ K K +G+LAT AT+ YQ+KL +V+ D + ++ I +
Sbjct: 113 QLRKHK--------IVGLLATTATMKTKMYQQKLNQYNIDVIETDD-LQQQAVMAGIYEV 163
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD---PLLKKCIDPMDALAR 320
++E + ++ + +L + AVI G E+ L + + P K+C+D ++ LA+
Sbjct: 164 KAGNVEKGKAMMLPVFEDMLAQGAEAVIFGCTEIPVALAEQNMNSP--KQCLDSLEILAK 221
Query: 321 STVTWARSNKKLTL 334
V W+ + L
Sbjct: 222 YCVEWSYEAEHTAL 235
>gi|197264432|ref|ZP_03164506.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197242687|gb|EDY25307.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
Length = 244
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 26/249 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG+ ++T + L K V +++ D + P L +S+ + +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIP-------------LIVSSIPDIPDR 49
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
T L + + L LE AGA CIV+PC+ +H W D+ +V +
Sbjct: 50 TACLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARM 101
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ +A L + S +G+LAT+ATL+ G YQ+K +G ++ P++A + +++ I
Sbjct: 102 ISILDATLGDIPP-SARHVGLLATNATLATGLYQKKALERGLTLIQPEEAG-QALVMQAI 159
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALA 319
L D A+ LL I L+ R A+I+G E+ ++ + + ID +L
Sbjct: 160 YTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLV 219
Query: 320 RSTVTWARS 328
R+ + W S
Sbjct: 220 RAAIRWYES 228
>gi|399087897|ref|ZP_10753321.1| aspartate racemase [Caulobacter sp. AP07]
gi|398031867|gb|EJL25238.1| aspartate racemase [Caulobacter sp. AP07]
Length = 259
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 22/259 (8%)
Query: 64 SAAASLLRSKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDP 123
A A L RS + IG++GG+ ++TL+FLGKL + D ++ + P
Sbjct: 8 GARAGLRRSARGEGGRPAGTLIGVLGGMGPAATLDFLGKLQANTPADVDQD------HWP 61
Query: 124 ALNEELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGD 183
L F AS ++ + L H + +R A L +AGA C +PC+ +H W +
Sbjct: 62 VLT---FSASQVPDRTAAI-LGHGESPLPA-MREGLAMLARAGASCAAIPCNTAHHWFDE 116
Query: 184 VSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFE 243
+ + +H+ + VA ELK +L GS +G+LAT T+ A YQ +L G
Sbjct: 117 LQASTDLTLVHIVDAVASELKARRLP----GS---VGLLATTGTVQARIYQRRLDAHGIA 169
Query: 244 VVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK 303
A + ++ IE + ++ A + ++ LL +AV++G E+ + P
Sbjct: 170 T---RTARDQAAVMRAIEDIKAGRLDRALPAVIGQVRELLDAGCDAVVLGCTELPLLAPD 226
Query: 304 DDPLLKKC-IDPMDALARS 321
P L+ ID DALAR+
Sbjct: 227 FPPALRAVSIDTTDALARA 245
>gi|417441954|ref|ZP_12162261.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|353611391|gb|EHC64056.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
Length = 244
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 114/249 (45%), Gaps = 26/249 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG+ ++T + L K V + + D + P L +S+ + +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHVSCDQQHIP-------------LIVSSIPDIPDR 49
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
T L + + L LE AGA CIV+PC+ +H W D+ + + +
Sbjct: 50 TACLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISILDATL 109
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
E+ S +G+LAT+ATL+ G YQ+K +G ++ P++A + +++ I
Sbjct: 110 GEIPP---------SARHVGLLATNATLATGLYQKKALARGLTLIQPEEAG-QALVMQAI 159
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALA 319
L D A+ LL I L+ R A+I+G E+ ++ + + ID +L
Sbjct: 160 YTLKRGDKTAAQALLLPQIDRLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLV 219
Query: 320 RSTVTWARS 328
R+ + W S
Sbjct: 220 RAAIRWYES 228
>gi|168262443|ref|ZP_02684416.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|205348837|gb|EDZ35468.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
Length = 244
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 26/249 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG+ ++T + L K V +++ D + P L +S+ + +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIP-------------LIVSSIPDIPDR 49
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
T L + + L LE AGA CIV+PC+ +H W D+ +V +
Sbjct: 50 TACLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARM 101
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ +A L + S +G+LAT+ATL+ G YQ+K +G ++ P++A + +++ I
Sbjct: 102 ISILDATLGDIPP-SARYVGLLATNATLATGLYQKKALARGLTLIQPEEAG-QALVMQAI 159
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALA 319
L D A+ LL I L+ R A+I+G E+ ++ + + ID +L
Sbjct: 160 YTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLV 219
Query: 320 RSTVTWARS 328
R+ + W S
Sbjct: 220 RAAIRWYES 228
>gi|62182935|ref|YP_219352.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161617810|ref|YP_001591776.1| hypothetical protein SPAB_05674 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|168464587|ref|ZP_02698490.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|194442279|ref|YP_002043753.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|198244578|ref|YP_002218382.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|200389289|ref|ZP_03215901.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|224586336|ref|YP_002640135.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|375117293|ref|ZP_09762463.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|375121922|ref|ZP_09767089.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|418762335|ref|ZP_13318464.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|418767478|ref|ZP_13323542.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|418770646|ref|ZP_13326667.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|418775112|ref|ZP_13331072.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|418778758|ref|ZP_13334666.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|418785188|ref|ZP_13341021.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|418787419|ref|ZP_13343220.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|418792941|ref|ZP_13348677.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|418796330|ref|ZP_13352022.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|418802922|ref|ZP_13358547.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|418808119|ref|ZP_13363676.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|418811852|ref|ZP_13367377.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|418816602|ref|ZP_13372094.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|418822191|ref|ZP_13377604.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|418832969|ref|ZP_13387902.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|418834104|ref|ZP_13389015.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|418841468|ref|ZP_13396287.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|418843862|ref|ZP_13398657.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|418848716|ref|ZP_13403454.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|418852907|ref|ZP_13407603.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|418859220|ref|ZP_13413825.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|418864342|ref|ZP_13418872.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|418869143|ref|ZP_13423583.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|419789967|ref|ZP_14315643.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|419794858|ref|ZP_14320466.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|445139302|ref|ZP_21384179.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|445153096|ref|ZP_21391228.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|62130568|gb|AAX68271.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161367174|gb|ABX70942.1| hypothetical protein SPAB_05674 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194400942|gb|ACF61164.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|195632992|gb|EDX51446.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197939094|gb|ACH76427.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|199606387|gb|EDZ04932.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|224470864|gb|ACN48694.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322717439|gb|EFZ09010.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|326626189|gb|EGE32534.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|392614125|gb|EIW96576.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|392614391|gb|EIW96838.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|392734770|gb|EIZ91951.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|392736371|gb|EIZ93534.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|392737240|gb|EIZ94401.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|392748910|gb|EJA05889.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|392752285|gb|EJA09226.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|392754965|gb|EJA11880.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|392765676|gb|EJA22460.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|392765971|gb|EJA22754.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|392771199|gb|EJA27920.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392776319|gb|EJA33007.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|392777947|gb|EJA34629.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|392778420|gb|EJA35100.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|392787866|gb|EJA44404.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|392789963|gb|EJA46465.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|392796438|gb|EJA52770.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|392806012|gb|EJA62127.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|392808797|gb|EJA64845.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|392815911|gb|EJA71842.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|392823016|gb|EJA78820.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|392828150|gb|EJA83847.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|392830388|gb|EJA86037.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|392830868|gb|EJA86511.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|392836865|gb|EJA92441.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|444853415|gb|ELX78486.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|444853936|gb|ELX79002.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
Length = 244
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 26/249 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG+ ++T + L K V +++ D + P L +S+ + +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIP-------------LIVSSIPDIPDR 49
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
T L + + L LE AGA CIV+PC+ +H W D+ +V +
Sbjct: 50 TACLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARM 101
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ +A L + S +G+LAT+ATL+ G YQ+K +G ++ P++A + +++ I
Sbjct: 102 ISILDATLGDIPP-SARHVGLLATNATLATGLYQKKALARGLTLIQPEEAG-QALVMQAI 159
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALA 319
L D A+ LL I L+ R A+I+G E+ ++ + + ID +L
Sbjct: 160 YTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLV 219
Query: 320 RSTVTWARS 328
R+ + W S
Sbjct: 220 RAAIRWYES 228
>gi|220922696|ref|YP_002497998.1| aspartate racemase [Methylobacterium nodulans ORS 2060]
gi|219947303|gb|ACL57695.1| aspartate racemase [Methylobacterium nodulans ORS 2060]
Length = 236
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 111/241 (46%), Gaps = 24/241 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G++GG+ +T++F+GK+V + A ++ VVC + + + L T
Sbjct: 2 LGVLGGMGPMATVDFMGKVVQNTPAACDQDHIQVVVC----MAANIPDRTAAILGEGTDP 57
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
+R V +LE AGA CI +PC+ +H WH + S+ LH+ + VA L
Sbjct: 58 FPAMRATVR--------WLETAGATCIAIPCNTAHHWHAALQAETSVRILHIVDAVADTL 109
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
AG G IGVLAT T+ AG YQ++L +GF PD A V + I +
Sbjct: 110 ---------AGQGGCIGVLATSGTVKAGIYQKRLALRGFSCRTPDAAGQAEV-MRAIRLV 159
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC-IDPMDALARST 322
+ A +LR + ++ V++ E+ L + L+ +D +ALA +
Sbjct: 160 KAGQLAEATTILRAQAEAMVAAGCRQVVMACTEIPVALATVNGALRSVLVDATEALACAC 219
Query: 323 V 323
V
Sbjct: 220 V 220
>gi|16767754|ref|NP_463369.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|56416294|ref|YP_153369.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|167551230|ref|ZP_02344985.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|167991305|ref|ZP_02572404.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168232862|ref|ZP_02657920.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|168243994|ref|ZP_02668926.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194451334|ref|YP_002048531.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194469149|ref|ZP_03075133.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|197365218|ref|YP_002144855.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|238910673|ref|ZP_04654510.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|374982563|ref|ZP_09723884.1| Aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|378447817|ref|YP_005235449.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378453484|ref|YP_005240844.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378702344|ref|YP_005184302.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378987178|ref|YP_005250334.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|378991772|ref|YP_005254936.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379703751|ref|YP_005245479.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383499069|ref|YP_005399758.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|386589803|ref|YP_006086203.1| Aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|417345877|ref|ZP_12125892.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|417370285|ref|ZP_12141202.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|417377778|ref|ZP_12146601.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|417494838|ref|ZP_12173401.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|417515337|ref|ZP_12178905.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|417543629|ref|ZP_12194753.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|418513029|ref|ZP_13079263.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|419731747|ref|ZP_14258656.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419733265|ref|ZP_14260165.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419741159|ref|ZP_14267867.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419742225|ref|ZP_14268902.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419748637|ref|ZP_14275130.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|421572154|ref|ZP_16017813.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421576643|ref|ZP_16022237.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421581367|ref|ZP_16026913.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421583956|ref|ZP_16029472.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|421886360|ref|ZP_16317534.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|422028752|ref|ZP_16375047.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422033806|ref|ZP_16379867.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427557956|ref|ZP_18930372.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427576024|ref|ZP_18934960.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427597655|ref|ZP_18939880.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427622039|ref|ZP_18944762.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427646259|ref|ZP_18949649.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427658760|ref|ZP_18954364.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427664046|ref|ZP_18959279.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427682155|ref|ZP_18964166.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|427802274|ref|ZP_18969699.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|437826226|ref|ZP_20843916.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|16423076|gb|AAL23328.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56130551|gb|AAV80057.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194409638|gb|ACF69857.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194455513|gb|EDX44352.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|197096695|emb|CAR62317.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|205323833|gb|EDZ11672.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205330368|gb|EDZ17132.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205333029|gb|EDZ19793.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|205337028|gb|EDZ23792.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|261249596|emb|CBG27465.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996863|gb|ACY91748.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160993|emb|CBW20529.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312915607|dbj|BAJ39581.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321222517|gb|EFX47589.1| Aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323132850|gb|ADX20280.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|332991319|gb|AEF10302.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|353582151|gb|EHC42889.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|353588871|gb|EHC47804.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|353628761|gb|EHC76719.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|353655561|gb|EHC96541.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|353656364|gb|EHC97133.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|357952401|gb|EHJ79345.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|366082594|gb|EHN46526.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|379983756|emb|CCF89807.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|380465890|gb|AFD61293.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|381290774|gb|EIC32030.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381292639|gb|EIC33822.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381300626|gb|EIC41685.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381313491|gb|EIC54274.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|381314649|gb|EIC55417.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|383796847|gb|AFH43929.1| Aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|402517603|gb|EJW25001.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402517893|gb|EJW25288.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402518392|gb|EJW25776.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402531857|gb|EJW39062.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|414011053|gb|EKS95031.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414011801|gb|EKS95745.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414012179|gb|EKS96108.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414026230|gb|EKT09507.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414026972|gb|EKT10227.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414029456|gb|EKT12615.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414040317|gb|EKT22944.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414041092|gb|EKT23679.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414045515|gb|EKT27905.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414054567|gb|EKT36509.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|414059104|gb|EKT40712.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|435305205|gb|ELO80741.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
Length = 244
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 26/249 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG+ ++T + L K V +++ D + P L +S+ + +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIP-------------LIVSSIPDIPDR 49
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
T L + + L LE AGA CIV+PC+ +H W D+ +V +
Sbjct: 50 TACLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARM 101
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ +A L + S +G+LAT+ATL+ G YQ+K +G ++ P+ A + +++ I
Sbjct: 102 ISILDATLGDIPP-SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QALVMQAI 159
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALA 319
L D A+ LL I L+ R A+I+G E+ ++ + + ID +L
Sbjct: 160 YTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLV 219
Query: 320 RSTVTWARS 328
R+ + W S
Sbjct: 220 RAAIRWYES 228
>gi|340708287|pdb|3S81|A Chain A, Crystal Structure Of Putative Aspartate Racemase From
Salmonella Typhimurium
gi|340708288|pdb|3S81|B Chain B, Crystal Structure Of Putative Aspartate Racemase From
Salmonella Typhimurium
gi|340708289|pdb|3S81|C Chain C, Crystal Structure Of Putative Aspartate Racemase From
Salmonella Typhimurium
gi|340708290|pdb|3S81|D Chain D, Crystal Structure Of Putative Aspartate Racemase From
Salmonella Typhimurium
Length = 268
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 26/249 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG+ ++T + L K V +++ D + P L +S+ + +
Sbjct: 27 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIP-------------LIVSSIPDIPDR 73
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
T L + + L LE AGA CIV+PC+ +H W D+ +V +
Sbjct: 74 TACLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARM 125
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ +A L + S +G+LAT+ATL+ G YQ+K +G ++ P+ A + +++ I
Sbjct: 126 ISILDATLGDIPP-SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QALVMQAI 183
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALA 319
L D A+ LL I L+ R A+I+G E+ ++ + + ID +L
Sbjct: 184 YTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLV 243
Query: 320 RSTVTWARS 328
R+ + W S
Sbjct: 244 RAAIRWYES 252
>gi|168821040|ref|ZP_02833040.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|409248761|ref|YP_006884600.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|205342298|gb|EDZ29062.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320084589|emb|CBY94380.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 244
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 26/249 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG+ ++T + L K V +++ D + P L +S+ + +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIP-------------LIVSSIPDIPDR 49
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
T L + + L LE AGA CIV+PC+ +H W D+ +V +
Sbjct: 50 TACLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARM 101
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ +A L + S +G+LAT+ATL+ G YQ+K +G ++ P+ A + +++ I
Sbjct: 102 ISILDATLGDIPP-SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QALVMQAI 159
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALA 319
L D A+ LL I L+ R A+I+G E+ ++ + + ID +L
Sbjct: 160 YTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLV 219
Query: 320 RSTVTWARS 328
R+ + W S
Sbjct: 220 RAAIRWYES 228
>gi|168234643|ref|ZP_02659701.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194735758|ref|YP_002117430.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|204926710|ref|ZP_03217912.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|375004454|ref|ZP_09728789.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|416506318|ref|ZP_11734536.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416519817|ref|ZP_11740084.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416526065|ref|ZP_11742119.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416534638|ref|ZP_11747126.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416555228|ref|ZP_11758713.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416563986|ref|ZP_11763046.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416569208|ref|ZP_11765396.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|417354709|ref|ZP_12131067.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|417362422|ref|ZP_12136078.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|417387669|ref|ZP_12152037.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|417393092|ref|ZP_12155705.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|417471785|ref|ZP_12167682.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|417535904|ref|ZP_12189232.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|422006405|ref|ZP_16353429.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|194711260|gb|ACF90481.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197291651|gb|EDY31001.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|204323375|gb|EDZ08570.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|353073792|gb|EHB39557.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|353560953|gb|EHC28029.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|353581513|gb|EHC42425.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|353599683|gb|EHC55793.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|353609824|gb|EHC63007.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|353621966|gb|EHC71651.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|353630590|gb|EHC78097.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|353655597|gb|EHC96565.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|363554916|gb|EHL39148.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363557099|gb|EHL41308.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363558130|gb|EHL42323.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363560045|gb|EHL44192.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363566744|gb|EHL50757.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363571530|gb|EHL55441.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|363577215|gb|EHL61041.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
Length = 244
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 30/251 (11%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG+ ++T + L K V +++ D + P L +S+ + +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIP-------------LIVSSIPDIPDR 49
Query: 141 TVQLDHIRGAVS--QNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
T L + G S + L LE AGA CIV+PC+ +H W D+ +V +
Sbjct: 50 TACL--LSGGPSPFRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKA 99
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIP 258
+ +A L + S +G+LAT+ATL+ G YQ+K +G ++ P+ A + +++
Sbjct: 100 RMISILDATLGDIPP-SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QALVMQ 157
Query: 259 TIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDA 317
I L D A+ LL I L+ R A+I+G E+ ++ + + ID +
Sbjct: 158 AIYTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTAS 217
Query: 318 LARSTVTWARS 328
L R+ + W S
Sbjct: 218 LVRAAIRWYES 228
>gi|423118296|ref|ZP_17105980.1| aspartate racemase [Klebsiella oxytoca 10-5246]
gi|376402140|gb|EHT14740.1| aspartate racemase [Klebsiella oxytoca 10-5246]
Length = 235
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 110/244 (45%), Gaps = 21/244 (8%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G++GG+ +TL+F +L+ + A++ + P VV N P + + A S S Q
Sbjct: 7 LGVLGGMGPLATLDFQRRLLDATPAQNDRQQIPSVVWNVPQIADRQ-KALAGSGPSPLPQ 65
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L H + + L QAGA I +PC+ +H W+ +S+ P LH+ + L
Sbjct: 66 LIH---GIEK--------LNQAGASHIAIPCNTAHHWYDALSQVSDAPILHIVDAAIAAL 114
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ KP R+G++AT TL AG+YQ +L QG EVV P + + +P A+
Sbjct: 115 AQQADKPQ------RVGIIATQGTLEAGWYQRQLAAQGVEVVEPTEQELARWFVPGCYAV 168
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK-DDPLLKKCIDPMDALA-RS 321
+E LL L R +I+ E+ L P DP ALA R
Sbjct: 169 KRGALEEGGELLVRQANALFTRGAQKLILACTEVPVALAAVKAPFNDLTFDPAQALAERC 228
Query: 322 TVTW 325
+ W
Sbjct: 229 SQLW 232
>gi|121535491|ref|ZP_01667300.1| aspartate racemase [Thermosinus carboxydivorans Nor1]
gi|121305910|gb|EAX46843.1| aspartate racemase [Thermosinus carboxydivorans Nor1]
Length = 236
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 96/185 (51%), Gaps = 26/185 (14%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
T+GI+GG+ +T + K++ + A+ +E P ++ N+P + + H+ ++
Sbjct: 3 TVGILGGMGPMATADLFIKIIQNTPARSDQEHIPIIIYNNPQIPSRIDAILQHAESPRS- 61
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV----GEC 198
+ IR AV FLEQAGA I MPC+ +H W+ D+ + +IP +++ +
Sbjct: 62 --ELIRSAV---------FLEQAGADFIAMPCNTAHYWYNDIQQAINIPLINMIDLTVDY 110
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIP 258
+A + A + P I +LAT AT+ G YQ++ +G E+++P A + +I
Sbjct: 111 IADKYPHAAVSP--------IMLLATAATVKVGLYQQRFAARGMEILVP-TAQEQQIISQ 161
Query: 259 TIEAL 263
I+A+
Sbjct: 162 AIDAV 166
>gi|365855327|ref|ZP_09395381.1| aspartate racemase [Acetobacteraceae bacterium AT-5844]
gi|363719249|gb|EHM02559.1| aspartate racemase [Acetobacteraceae bacterium AT-5844]
Length = 234
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 126/248 (50%), Gaps = 23/248 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G++GG+ ++ F+ +L + A+ ++ P V+ +DP + + + L+
Sbjct: 6 LGVLGGMGPLASAQFMLRLTLLTPAERDQDHIPAVLWSDPRVPDR----TAARLQGGEDP 61
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L A+++ L+ AGA I +PC+ +H W+ + +P LH+ + A++L
Sbjct: 62 LPWFTRAIAE--------LKAAGAGAIAIPCNTAHGWYDQMVAATDLPILHIVDAAAEDL 113
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
++ SG R+GV+ T TL+ YQ +L+ G+EV++PD+A M+ ++ P I +
Sbjct: 114 ARQGIR-----SG-RVGVMGTAGTLAMRLYQPRLEALGYEVIVPDEAEMQSLVSPGIALV 167
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQ-GVL--PKDDPLLKKCIDPMDALAR 320
+ A L L R AV++G E+ G+L P + + +D +DALA
Sbjct: 168 KANKVTEAYAPLAEAAGRLRDRGAAAVVLGCTEIPLGILAGPYAE-IGVPLVDTIDALAL 226
Query: 321 STVTWARS 328
+++ WARS
Sbjct: 227 ASIRWARS 234
>gi|207859637|ref|YP_002246288.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|421356820|ref|ZP_15807135.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421364125|ref|ZP_15814362.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421365799|ref|ZP_15816010.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421371770|ref|ZP_15821927.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421375085|ref|ZP_15825201.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421379143|ref|ZP_15829217.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421384369|ref|ZP_15834396.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421391362|ref|ZP_15841329.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421394088|ref|ZP_15844031.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421397555|ref|ZP_15847470.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421401615|ref|ZP_15851486.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421406635|ref|ZP_15856448.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421413941|ref|ZP_15863690.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421415179|ref|ZP_15864911.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421420339|ref|ZP_15870017.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421424612|ref|ZP_15874252.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421429132|ref|ZP_15878731.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421436403|ref|ZP_15885934.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421438288|ref|ZP_15887786.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421442727|ref|ZP_15892175.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421450124|ref|ZP_15899500.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|436623940|ref|ZP_20514915.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|436713983|ref|ZP_20518745.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|436798464|ref|ZP_20523423.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436805792|ref|ZP_20526312.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436817451|ref|ZP_20534513.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436846343|ref|ZP_20539274.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436851922|ref|ZP_20542418.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436858702|ref|ZP_20547107.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436863960|ref|ZP_20550179.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436869140|ref|ZP_20553512.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436881266|ref|ZP_20560807.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436884539|ref|ZP_20562183.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436892689|ref|ZP_20566816.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436900100|ref|ZP_20571180.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436910372|ref|ZP_20576899.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436916573|ref|ZP_20580420.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436926337|ref|ZP_20586291.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436935089|ref|ZP_20590639.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436939450|ref|ZP_20593756.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436952057|ref|ZP_20601087.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436956816|ref|ZP_20602729.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436972764|ref|ZP_20610350.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436986938|ref|ZP_20615638.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436995165|ref|ZP_20619179.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437002630|ref|ZP_20621248.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437015529|ref|ZP_20625815.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437034573|ref|ZP_20633087.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437040394|ref|ZP_20634643.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437049850|ref|ZP_20640252.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437057780|ref|ZP_20644702.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437063346|ref|ZP_20648021.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437072292|ref|ZP_20652464.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437084508|ref|ZP_20659673.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437093848|ref|ZP_20664086.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437100750|ref|ZP_20666130.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437123243|ref|ZP_20672853.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437126794|ref|ZP_20674631.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437136145|ref|ZP_20679695.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437148401|ref|ZP_20687478.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437149815|ref|ZP_20688368.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437160529|ref|ZP_20694689.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437172550|ref|ZP_20701162.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437176434|ref|ZP_20703440.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437180857|ref|ZP_20706202.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437199522|ref|ZP_20711524.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|437262558|ref|ZP_20718947.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437268578|ref|ZP_20722030.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437280414|ref|ZP_20727844.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437284588|ref|ZP_20729723.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437312601|ref|ZP_20736547.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437323193|ref|ZP_20739157.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437345345|ref|ZP_20746488.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437374922|ref|ZP_20749763.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437410029|ref|ZP_20752592.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437447712|ref|ZP_20758978.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437465325|ref|ZP_20763891.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437475442|ref|ZP_20766615.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437493065|ref|ZP_20771839.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437508461|ref|ZP_20776260.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437523129|ref|ZP_20779248.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437559233|ref|ZP_20785649.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437569851|ref|ZP_20788098.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437584512|ref|ZP_20792740.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437610595|ref|ZP_20800906.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437618557|ref|ZP_20803170.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437637590|ref|ZP_20807351.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437659828|ref|ZP_20812320.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437671316|ref|ZP_20815902.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437691345|ref|ZP_20820688.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437706126|ref|ZP_20825328.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437732883|ref|ZP_20831887.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437754078|ref|ZP_20834101.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437807106|ref|ZP_20839690.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437939297|ref|ZP_20851548.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438058814|ref|ZP_20856608.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|438085245|ref|ZP_20858707.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438103488|ref|ZP_20865403.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438113612|ref|ZP_20869700.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|445175526|ref|ZP_21397381.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445216939|ref|ZP_21402165.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445227690|ref|ZP_21404386.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445252658|ref|ZP_21409032.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445333869|ref|ZP_21415001.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445346690|ref|ZP_21418897.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445361177|ref|ZP_21423715.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|206711440|emb|CAR35824.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|395984899|gb|EJH94074.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|395992717|gb|EJI01828.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395992994|gb|EJI02104.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|396002294|gb|EJI11286.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|396006254|gb|EJI15224.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|396007553|gb|EJI16500.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396011770|gb|EJI20676.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396016433|gb|EJI25301.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396020003|gb|EJI28853.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396033237|gb|EJI41948.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396033321|gb|EJI42029.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396034520|gb|EJI43210.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396037750|gb|EJI46395.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396045456|gb|EJI54049.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396048253|gb|EJI56809.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396053427|gb|EJI61922.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396059414|gb|EJI67868.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396059569|gb|EJI68022.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396067566|gb|EJI75924.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|396072862|gb|EJI81170.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396073458|gb|EJI81759.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|434960538|gb|ELL53912.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434963346|gb|ELL56460.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|434969805|gb|ELL62479.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434971389|gb|ELL63905.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434977990|gb|ELL70068.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434985969|gb|ELL77648.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434988672|gb|ELL80258.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434989014|gb|ELL80590.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|434996957|gb|ELL88252.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|435003172|gb|ELL94200.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435004296|gb|ELL95272.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435013382|gb|ELM04031.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435020388|gb|ELM10792.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435022427|gb|ELM12744.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435027752|gb|ELM17852.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435033062|gb|ELM22979.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435037513|gb|ELM27317.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435040124|gb|ELM29891.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435047717|gb|ELM37290.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435049826|gb|ELM39336.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435055302|gb|ELM44719.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435058024|gb|ELM47381.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435060899|gb|ELM50141.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435063247|gb|ELM52409.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435073640|gb|ELM62496.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435076075|gb|ELM64872.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435084207|gb|ELM72794.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435087372|gb|ELM75879.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435095462|gb|ELM83776.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435095634|gb|ELM83924.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435102328|gb|ELM90433.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435105942|gb|ELM93968.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435110479|gb|ELM98397.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435110763|gb|ELM98671.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435121533|gb|ELN09066.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435124525|gb|ELN11982.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435129880|gb|ELN17149.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435132118|gb|ELN19318.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435136881|gb|ELN23954.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435144915|gb|ELN31745.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435146920|gb|ELN33701.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435147360|gb|ELN34130.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435155745|gb|ELN42274.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435161738|gb|ELN47952.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435167006|gb|ELN52948.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435170561|gb|ELN56308.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435173873|gb|ELN59340.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435182615|gb|ELN67612.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435185316|gb|ELN70196.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435190160|gb|ELN74754.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435194925|gb|ELN79339.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435204537|gb|ELN88208.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435205239|gb|ELN88855.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435209323|gb|ELN92645.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435216755|gb|ELN99227.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435219669|gb|ELO02012.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|435223308|gb|ELO05342.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435228202|gb|ELO09646.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435233210|gb|ELO14252.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435239654|gb|ELO20143.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435249715|gb|ELO29476.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435249778|gb|ELO29538.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435252025|gb|ELO31622.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435259176|gb|ELO38405.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435262693|gb|ELO41776.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435269584|gb|ELO48115.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435279249|gb|ELO57052.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435280271|gb|ELO57996.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435280716|gb|ELO58404.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435287531|gb|ELO64730.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435291988|gb|ELO68778.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435301053|gb|ELO77100.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435309540|gb|ELO84222.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|435311080|gb|ELO85363.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435313971|gb|ELO87473.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|435319242|gb|ELO92096.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435323125|gb|ELO95294.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435329353|gb|ELP00777.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|444857920|gb|ELX82915.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444857939|gb|ELX82933.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444866784|gb|ELX91499.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444875397|gb|ELX99599.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444877787|gb|ELY01923.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444884816|gb|ELY08631.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|444889498|gb|ELY12931.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
Length = 244
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 26/249 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG+ ++T + L K V +++ D + P L +S+ + +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIP-------------LIVSSIPDIPDR 49
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
T L + + L LE AGA CIV+PC+ +H W D+ +V +
Sbjct: 50 TACLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARM 101
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ +A L + S +G+LAT+ATL+ G YQ+K +G ++ P++A + +++ I
Sbjct: 102 ISILDATLGDIPP-SARHVGLLATNATLATGLYQKKALARGLTLIQPEEAG-QALVMQAI 159
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALA 319
L D A+ LL I L+ R A+I+G E+ ++ + + ID +L
Sbjct: 160 YTLKRGDKTVAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLV 219
Query: 320 RSTVTWARS 328
R+ + W S
Sbjct: 220 RAAIRWYES 228
>gi|453069668|ref|ZP_21972923.1| aspartate racemase [Rhodococcus qingshengii BKS 20-40]
gi|452762809|gb|EME21099.1| aspartate racemase [Rhodococcus qingshengii BKS 20-40]
Length = 243
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 115/240 (47%), Gaps = 23/240 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAE-ECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IGI+GG+ ++T +F KLV + + E P V+ DP + + A + T
Sbjct: 6 IGILGGMGPAATADFYSKLVALTPGSTDQEHPKVVIWADPTVPDRTL-ALTENGPDPTPW 64
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L IRGA L ++GA + +PC+ +HA+ +S +P +H+ + VA+ +
Sbjct: 65 L--IRGA---------RVLRESGATTLAIPCNTAHAFLPAISSQLGLPVVHMIDEVARHI 113
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ L P + +G+LAT T+ G YQ+ L +V++P A + +++P I A+
Sbjct: 114 R--TLSP----AVTSVGLLATTGTVRTGLYQQWLSEHSIDVLVPGPAIQDELVMPAIRAI 167
Query: 264 NHRDM--EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARS 321
++ E L+R LL+ V+ G E+ LP D + IDP LAR+
Sbjct: 168 KSGNVGDETTDKLVR-AADLLVESGAQVVVAGCTEIPLGLPADA-TTCQIIDPATILARA 225
>gi|288353362|ref|YP_003422659.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ZM4]
gi|285026763|gb|ADC33856.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 237
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 24/251 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVC-NDPALNEELFHASVHSLKSKT 141
IG++GG+ +TL+ L K++ + KD + P VVC N P + + +
Sbjct: 7 IGVLGGMGPLATLDLLHKIIAATPAEKDQDHVP--VVCWNVPQIADRQKALAGKGDSPLP 64
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
L+ I ++ H IV+PC+ +H W+ + E P LH+ +
Sbjct: 65 QLLEGIEKLNRLDVSH------------IVIPCNTAHHWYHALVEVSHAPILHIADETIT 112
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
++ + P ++G++AT TLSAG+YQ+KL EV+ P + M + +
Sbjct: 113 QILSMEAVP------KKVGIIATQGTLSAGWYQKKLIAANIEVIFPTEGEMNRLFVAGCY 166
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD-PLLKKCIDPMDALAR 320
A+ + A LL L+ R +++ E+ L ++ P LKK IDP + LA+
Sbjct: 167 AVKQNKLATAAQLLEELSASLVNRGAEKLLLACTEVPLALAYNNSPFLKKSIDPTEMLAQ 226
Query: 321 STVTWARSNKK 331
S V + KK
Sbjct: 227 SCVNIWKDQKK 237
>gi|417327996|ref|ZP_12113259.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|353569098|gb|EHC33780.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
Length = 244
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 26/249 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG+ ++T + L K V +++ D + P L +S+ + +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIP-------------LIVSSIPDIPDR 49
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
T L + + L LE AGA CIV+PC+ +H W D+ +V +
Sbjct: 50 TACLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARM 101
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ +A L + S +G+LAT+ATL+ G YQ+K +G ++ P+ A + +++ I
Sbjct: 102 ISILDATLGDIPP-SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QALVMQAI 159
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALA 319
L D A+ LL I L+ R A+I+G E+ ++ + + ID +L
Sbjct: 160 YTLKRGDKIAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLV 219
Query: 320 RSTVTWARS 328
R+ + W S
Sbjct: 220 RAAIRWYES 228
>gi|16763318|ref|NP_458935.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|29144796|ref|NP_808138.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|213428375|ref|ZP_03361125.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213581046|ref|ZP_03362872.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
gi|213609708|ref|ZP_03369534.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
gi|289825451|ref|ZP_06544682.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|378962738|ref|YP_005220224.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
gi|25512393|pir||AD1067 probable aspartate racemase [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16505627|emb|CAD03355.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29140435|gb|AAO71998.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|374356610|gb|AEZ48371.1| Aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
Length = 244
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 116/249 (46%), Gaps = 26/249 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG+ ++T + L K V + + D + P L +S+ + +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHVSCDQQHIP-------------LIVSSIPDIPDR 49
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
T L + + L LE AGA CIV+PC+ +H W D+ +V +
Sbjct: 50 TACLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARM 101
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ +A L + S +G+LAT+ATL+ G YQ+K +G ++ P+ A + +++ I
Sbjct: 102 ISILDATLGDIPP-SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QALVMQAI 159
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALA 319
L D A+ LL I L+ R A+I+G E+ ++ + + ID +L
Sbjct: 160 YTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLV 219
Query: 320 RSTVTWARS 328
R+ + W S
Sbjct: 220 RAAIRWYES 228
>gi|213052215|ref|ZP_03345093.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
Length = 246
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 116/249 (46%), Gaps = 26/249 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG+ ++T + L K V + + D + P L +S+ + +
Sbjct: 5 HTIGILGGMGPAATADMLEKFVELRHVSCDQQHIP-------------LIVSSIPDIPDR 51
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
T L + + L LE AGA CIV+PC+ +H W D+ +V +
Sbjct: 52 TACLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARM 103
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ +A L + S +G+LAT+ATL+ G YQ+K +G ++ P+ A + +++ I
Sbjct: 104 ISILDATLGDIPP-SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QALVMQAI 161
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALA 319
L D A+ LL I L+ R A+I+G E+ ++ + + ID +L
Sbjct: 162 YTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLV 221
Query: 320 RSTVTWARS 328
R+ + W S
Sbjct: 222 RAAIRWYES 230
>gi|438144308|ref|ZP_20875429.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|434939274|gb|ELL46125.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
Length = 244
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 26/249 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG+ ++T + L K V + + D + P L +S+ + +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHDSCDQQHIP-------------LIVSSIPDIPDR 49
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
T L + + L LE AGA CIV+PC+ +H W D+ +V +
Sbjct: 50 TACLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARM 101
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ +A L + S +G+LAT+ATL+ G YQ+K +G ++ P++A + +++ I
Sbjct: 102 ISILDATLGDIPP-SARHVGLLATNATLATGLYQKKALARGLTLIQPEEAG-QALVMQAI 159
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALA 319
L D A+ LL I L+ R A+I+G E+ ++ + + ID +L
Sbjct: 160 YTLKRGDKTVAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLV 219
Query: 320 RSTVTWARS 328
R+ + W S
Sbjct: 220 RAAIRWYES 228
>gi|251790314|ref|YP_003005035.1| aspartate racemase [Dickeya zeae Ech1591]
gi|247538935|gb|ACT07556.1| aspartate racemase [Dickeya zeae Ech1591]
Length = 252
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 113/245 (46%), Gaps = 27/245 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSA--KDAEECPPFVVCNDPALNEELFHASVHSLKSKT- 141
IGI+GG+ +T++ + KL+ + KD E P V S+ + +T
Sbjct: 19 IGILGGMGPGATVDAMQKLIRQTPARKDQEHIPVIAV-------------SIPDIPDRTQ 65
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
L+H + + + + R LE AGA CI++PC+ +H W D+ + + + + E +
Sbjct: 66 CILNHSPSPLKKMIEYMR-ILENAGATCIIIPCNTAHYWFEDLKQHTQVDMISIIEAACQ 124
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
++ E +++ + +LAT AT+ + YQ L +Q LP + ++ +I
Sbjct: 125 QVAEQRVR--------HVAILATTATVRSDIYQHALADQQVRCTLPTNE-QQDAVMNSIY 175
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC-IDPMDALAR 320
A D+ +R LL + L + V +I+G E+ +L + +D DAL +
Sbjct: 176 AYKAGDVAQSRALLLPVVASLRQQGVEKMILGCTELPLILETEVSTTPDIYLDATDALIK 235
Query: 321 STVTW 325
T+ W
Sbjct: 236 KTIAW 240
>gi|337279037|ref|YP_004618508.1| aspartate racemase [Ramlibacter tataouinensis TTB310]
gi|334730113|gb|AEG92489.1| aspartate racemase-like protein [Ramlibacter tataouinensis TTB310]
Length = 245
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 20/189 (10%)
Query: 116 PFVVCNDPALNEELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCH 175
P ++CNDP + + ++ Q + A+ LR LE+AGA I +PC+
Sbjct: 43 PALLCNDPRIPDRS--------SARLGQGEDPLQAMLAGLR----LLERAGASLIAIPCN 90
Query: 176 ISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQE 235
+H W+ ++ +P LH+ E V +L+ G+ IG++ T ATL G YQE
Sbjct: 91 TAHLWYEQMARRTRVPLLHIVEAVCDDLE-------RLGARDPIGLMGTPATLKLGLYQE 143
Query: 236 KLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSD 295
L+ +G+EV++PD+ + + I A+ A I+ L+ R AV++G
Sbjct: 144 PLRARGYEVIVPDELGLAQCVA-AIAAVKANRPAEAFEPAAACIRALVARGARAVVLGCT 202
Query: 296 EMQGVLPKD 304
E+ +P D
Sbjct: 203 ELPLAVPHD 211
>gi|89095413|ref|ZP_01168326.1| aspartate racemase [Neptuniibacter caesariensis]
gi|89080320|gb|EAR59579.1| aspartate racemase [Oceanospirillum sp. MED92]
Length = 258
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 116/258 (44%), Gaps = 35/258 (13%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSA--KDAEECPPFV--VCNDPALNEELFHASVHSLK 138
T+G++GG+ +TL+F K++ + +D E P + + P + L + S L
Sbjct: 25 KTLGVLGGMGPLATLDFAHKIIQNTPAQRDQEHIPMLIRSIPQIPDRTDCLMNDSASPLT 84
Query: 139 SKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
A+ Q L L AG I +PC+ +H W D+ +P H+
Sbjct: 85 -----------AMLQGLEE----LLSAGVEAIAIPCNTAHFWQPDLQAKSPVPVFHIAHA 129
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIP 258
++ L++ ++ ++ ++ATD TL AGFY E L QG ++ LP A ++ I+
Sbjct: 130 CSESLQQLQIS--------KVTLMATDGTLKAGFYPEILSRQGIQLELP-PADIQQKIMR 180
Query: 259 TIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPL----LKKCIDP 314
I ++ ++ LL Q LL + VI+G E+ L D L L + +D
Sbjct: 181 GIYSVKSGNIALGGKLLNNAFQSLLNQGFERVILGCTEIPLAL---DHLGAEHLDRSLDA 237
Query: 315 MDALARSTVTWARSNKKL 332
ALA V W+ S + L
Sbjct: 238 TSALASFCVDWSISAQPL 255
>gi|242238706|ref|YP_002986887.1| aspartate racemase [Dickeya dadantii Ech703]
gi|242130763|gb|ACS85065.1| aspartate racemase [Dickeya dadantii Ech703]
Length = 236
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 118/248 (47%), Gaps = 25/248 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IGI+GG+ +T++ + KL+ + A +E P + + P + + +++ +
Sbjct: 5 IGILGGMGPGATVDAMQKLINNTPAHTDQEHIPMIAVSIPDIPD----------RTRCI- 53
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L +S+ L++ R LE AGA CI+MPC+ +H W D+ + + + + +
Sbjct: 54 LQQGTSPLSKMLQYLR-ILENAGASCIIMPCNTAHYWFDDLKRHTRTEMISIIDATCQWI 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
E L+ +G+LAT AT+ A YQ L Q LP +A + ++ +I A
Sbjct: 113 DEQSLR--------HVGLLATTATVRADIYQHALSRQQVRCTLPSQAEQD-AVMDSIYAY 163
Query: 264 NHRDMEGARNLLRIGIQLLLVR-AVNAVIIGSDEMQGVL-PKDDPLLKKCIDPMDALARS 321
+ AR LL + +Q L R V +I+G E+ +L P+ +D +AL R
Sbjct: 164 KAGNFALARQLL-LPVQTELQRQGVEKIILGCTELPLILAPEILAAPAAYLDATEALVRK 222
Query: 322 TVTWARSN 329
TV W ++
Sbjct: 223 TVAWYYTH 230
>gi|197251317|ref|YP_002149466.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|440762531|ref|ZP_20941588.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|440769873|ref|ZP_20948828.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|440772041|ref|ZP_20950950.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|197215020|gb|ACH52417.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|436413270|gb|ELP11206.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|436419954|gb|ELP17825.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|436423069|gb|ELP20888.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
Length = 244
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 116/249 (46%), Gaps = 26/249 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG+ ++T + L K V +++ D + P L +S+ + +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIP-------------LIVSSIPDIPDR 49
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
T L + + L LE AGA CIV+PC+ +H W D+ +V +
Sbjct: 50 TACLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARM 101
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ +A L + S +G+LAT+ATL+ G YQ+K +G ++ P+ A + +++ I
Sbjct: 102 ISILDATLGDIPP-SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QALVMQAI 159
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALA 319
L D A+ LL I L+ R +I+G E+ ++ + + ID +L
Sbjct: 160 YTLKRGDKTAAQALLLPQIDSLIARGAQTIIMGCTEIPLIVAGHERAIACPMIDSTASLV 219
Query: 320 RSTVTWARS 328
R+ + W S
Sbjct: 220 RAAIRWYES 228
>gi|416423641|ref|ZP_11691030.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416433321|ref|ZP_11696847.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416441986|ref|ZP_11702073.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416447001|ref|ZP_11705513.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416455190|ref|ZP_11710815.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416457981|ref|ZP_11712583.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416465286|ref|ZP_11716758.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416482014|ref|ZP_11723540.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416487164|ref|ZP_11725474.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416495963|ref|ZP_11728870.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416543594|ref|ZP_11752376.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416580499|ref|ZP_11771890.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416587883|ref|ZP_11776419.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416592293|ref|ZP_11779114.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416600253|ref|ZP_11784200.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416607727|ref|ZP_11788798.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416615472|ref|ZP_11793384.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416621202|ref|ZP_11796221.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416633729|ref|ZP_11802117.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416644041|ref|ZP_11806424.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416646240|ref|ZP_11807506.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416655857|ref|ZP_11812833.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416669279|ref|ZP_11819245.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416683573|ref|ZP_11824413.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416694263|ref|ZP_11827076.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416708368|ref|ZP_11833230.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416710214|ref|ZP_11834319.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416717645|ref|ZP_11839897.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416726339|ref|ZP_11846400.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416731219|ref|ZP_11849134.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416740826|ref|ZP_11854699.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416744802|ref|ZP_11856760.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416752699|ref|ZP_11860511.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416763692|ref|ZP_11867366.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416770201|ref|ZP_11871553.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|418483522|ref|ZP_13052529.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418488590|ref|ZP_13056195.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418496676|ref|ZP_13063110.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418500756|ref|ZP_13067147.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418503872|ref|ZP_13070231.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418508531|ref|ZP_13074834.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418523967|ref|ZP_13089955.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|322615680|gb|EFY12600.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322618740|gb|EFY15629.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322621846|gb|EFY18696.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322627571|gb|EFY24362.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322630877|gb|EFY27641.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322637904|gb|EFY34605.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322642267|gb|EFY38874.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322643862|gb|EFY40410.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322651060|gb|EFY47445.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322656685|gb|EFY52973.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322659891|gb|EFY56134.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322661900|gb|EFY58116.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322666353|gb|EFY62531.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322672772|gb|EFY68883.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322676202|gb|EFY72273.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322680686|gb|EFY76724.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322684420|gb|EFY80424.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323194243|gb|EFZ79440.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323197389|gb|EFZ82529.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323201494|gb|EFZ86558.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323213019|gb|EFZ97821.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323215392|gb|EGA00136.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323219375|gb|EGA03860.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323226196|gb|EGA10413.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323228849|gb|EGA12978.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323236540|gb|EGA20616.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323239960|gb|EGA24007.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323241994|gb|EGA26023.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323247859|gb|EGA31796.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323251502|gb|EGA35373.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323258132|gb|EGA41809.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323263725|gb|EGA47246.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323265681|gb|EGA49177.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323270126|gb|EGA53574.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|366057106|gb|EHN21411.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366061015|gb|EHN25268.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366067288|gb|EHN31438.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366069760|gb|EHN33882.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366072200|gb|EHN36292.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366079786|gb|EHN43768.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366830930|gb|EHN57796.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372208279|gb|EHP21775.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
Length = 244
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 26/249 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG+ ++T + L K V +++ D + P L +S+ + +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIP-------------LIVSSIPDIPDR 49
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
T L + + L LE AGA CIV+PC+ +H W D+ +V +
Sbjct: 50 TACLLSGGPSPFRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARM 101
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ +A L + S +G+LAT+ATL+ G YQ+K +G ++ P+ A + +++ I
Sbjct: 102 ISILDATLGDIPP-SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QALVMQAI 159
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALA 319
L D A+ LL I L+ R A+I+G E+ ++ + + ID +L
Sbjct: 160 YTLKRGDKTVAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLV 219
Query: 320 RSTVTWARS 328
R+ + W S
Sbjct: 220 RAAIRWYES 228
>gi|213648841|ref|ZP_03378894.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
Length = 226
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 115/246 (46%), Gaps = 26/246 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG+ ++T + L K V + + D + P L +S+ + +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHVSCDQQHIP-------------LIVSSIPDIPDR 49
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
T L + + L LE AGA CIV+PC+ +H W D+ +V +
Sbjct: 50 TACLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARM 101
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ +A L + S +G+LAT+ATL+ G YQ+K +G ++ P+ A + +++ I
Sbjct: 102 ISILDATLGDIPP-SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QALVMQAI 159
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALA 319
L D A+ LL I L+ R A+I+G E+ ++ + + ID +L
Sbjct: 160 YTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLV 219
Query: 320 RSTVTW 325
R+ + W
Sbjct: 220 RAAIRW 225
>gi|296536291|ref|ZP_06898405.1| aspartate racemase [Roseomonas cervicalis ATCC 49957]
gi|296263380|gb|EFH09891.1| aspartate racemase [Roseomonas cervicalis ATCC 49957]
Length = 235
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 119/251 (47%), Gaps = 21/251 (8%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSL 137
++ A +G++GG+ ++ F+ +L + A+ ++ P ++ +DP + + + L
Sbjct: 1 MSGAPFLGVLGGMGPLASAQFMLRLTLLTPAERDQDHLPALLWSDPRIPDR----TAARL 56
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
L + + A LE AG I +PC+ +H W+ + +P LH+ +
Sbjct: 57 AGGEDPLPWLLRGI--------AGLEAAGCGAIAIPCNTAHGWYEAMQAATPLPILHIVD 108
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
A++L + SG R+G+LAT TL+ YQ +L+ +G+ V+ PD+A M ++
Sbjct: 109 AAAEDLARQGVA-----SG-RVGLLATAGTLAMRLYQPRLEARGYSVITPDEAEMRELVS 162
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQ-GVLPKDDPLLK-KCIDPM 315
P I + + A L L R AV++G E+ G+ + +D +
Sbjct: 163 PGIALVKANRVAEAYAPLAEAATRLKARGAAAVVLGCTEIPLGIQAGPSAEIGLPLVDTI 222
Query: 316 DALARSTVTWA 326
DALA +++ WA
Sbjct: 223 DALALASLRWA 233
>gi|242238745|ref|YP_002986926.1| aspartate racemase [Dickeya dadantii Ech703]
gi|242130802|gb|ACS85104.1| aspartate racemase [Dickeya dadantii Ech703]
Length = 241
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 25/250 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GI+GG+ +T + L K++ + A+ ++ P VV N P + + + +
Sbjct: 10 LGILGGMGPLATADLLQKIIAATPAERDQQHVPLVVWNVPQIPDRQRALA----GTGPSP 65
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L +R VS+ L + GA I + C+ +H W D+ P LH+ + +L
Sbjct: 66 LPALRDGVSR--------LNRLGASHIAIACNTAHHWFDDLQASSEAPLLHIADAALSQL 117
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
A P E RIG++AT TL+AG+YQ++L +G VLPD +E + +P A+
Sbjct: 118 TTAA-PPSER----RIGLIATHGTLAAGWYQQRLAERGMTPVLPDADELETLFVPGCYAV 172
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPL----LKKCIDPMDALA 319
++ L + L R +I+ E V P D + L++ ID ALA
Sbjct: 173 KRGEVAAGGRLFEQLAERLAERGAERLILACTE---VAPGLDAIRSRWLQRSIDTTQALA 229
Query: 320 RSTVTWARSN 329
+ V R +
Sbjct: 230 LACVALWRPS 239
>gi|307130300|ref|YP_003882316.1| aspartate racemase [Dickeya dadantii 3937]
gi|306527829|gb|ADM97759.1| Probable aspartate racemase [Dickeya dadantii 3937]
Length = 238
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 111/243 (45%), Gaps = 23/243 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GI+GG+ +T++ + KL+ + A+ +E P + + P + + HS+
Sbjct: 5 VGILGGMGPGATVDAMQKLIRQTPARKDQEHIPMIAVSIPDIPDRTQCILNHSVSPLQKM 64
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
+++++ LE AGA CI++PC+ +H W D+ + + + + +++
Sbjct: 65 VEYMK------------ILENAGASCIIIPCNTAHYWFEDLKRHTQLEMISIIDATCQQV 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
E +++ + +LAT AT+ YQ L Q LP + ++ +I A
Sbjct: 113 AEQRVR--------HVAILATTATVRGEIYQHALAGQQVRCTLPTD-EQQDAVMNSIYAY 163
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL-PKDDPLLKKCIDPMDALARST 322
D+ AR LL + L R V +I+G E+ +L P+ +D DAL + T
Sbjct: 164 KAGDVAQARALLLPVVASLRQRGVEKIILGCTELPLILEPEAVAEPDAYLDATDALIKKT 223
Query: 323 VTW 325
+ W
Sbjct: 224 IAW 226
>gi|393768383|ref|ZP_10356923.1| aspartate racemase [Methylobacterium sp. GXF4]
gi|392726209|gb|EIZ83534.1| aspartate racemase [Methylobacterium sp. GXF4]
Length = 237
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 19/173 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G++GG+ +T +FL KLV + A+ ++ P ++C+ ++ + + L
Sbjct: 2 LGVLGGMGPLATADFLAKLVRATPARRDQDHIPTLICS----AADIPNRASAILGRGPDP 57
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L +R A+++ LE AGA I +PC+ +H WH + G ++P LH+ + VA +L
Sbjct: 58 LPAMRAALAR--------LETAGATRIAIPCNTAHHWHAALQAGTALPILHIVDAVADDL 109
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
+ L +G IG+LA+ TL G Y E+L GF + PD + V+
Sbjct: 110 DASGL------AGGPIGLLASAGTLRVGLYPERLARHGFTGLSPDPDGQDAVV 156
>gi|226188079|dbj|BAH36183.1| probable aspartate racemase [Rhodococcus erythropolis PR4]
Length = 243
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 114/240 (47%), Gaps = 23/240 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAE-ECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IGI+GG+ ++T +F KLV + + E P V+ DP + + A T
Sbjct: 6 IGILGGMGPAATADFYSKLVALTPGSTDQEHPKVVIWADPTVPDRTL-ALTEDGPDPTPW 64
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L +RGA L ++GA + +PC+ +HA+ +S +P +H+ + VA+ +
Sbjct: 65 L--LRGA---------RVLRESGATTLAIPCNTAHAFLPAISSQLGLPVVHMIDEVARHI 113
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ L P + +G+LAT T+ G YQ+ L +V++P A + +++P I A+
Sbjct: 114 R--TLSP----AVTSVGLLATTGTVRTGLYQQWLSEYSIDVLVPGPAIQDELVMPAIRAI 167
Query: 264 NHRDM--EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARS 321
++ E L+R LL+ V+ G E+ LP D + IDP LAR+
Sbjct: 168 KSGNVGDETTDKLVR-AADLLVESGAQVVVAGCTEIPLGLPADATTC-QIIDPATILARA 225
>gi|229491591|ref|ZP_04385412.1| aspartate racemase [Rhodococcus erythropolis SK121]
gi|229321272|gb|EEN87072.1| aspartate racemase [Rhodococcus erythropolis SK121]
Length = 265
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 25/253 (9%)
Query: 72 SKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAE-ECPPFVVCNDPALNEELF 130
+ SP S+ + IGI+GG+ ++T +F KLV + + E P V+ DP + +
Sbjct: 14 ASSPASMSDP--VIGILGGMGPAATADFYSKLVALTPGSTDQEHPKVVIWADPTVPDRTL 71
Query: 131 HASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSI 190
A + T L IRGA L ++GA + +PC+ +HA+ +S
Sbjct: 72 -ALTENGPDPTPWL--IRGA---------RVLRESGATTLAIPCNTAHAFLPAISSQLGH 119
Query: 191 PFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
P +H+ + VA+ ++ L P + +G+LAT T+ G YQ+ L +V++P A
Sbjct: 120 PVVHMIDEVARHIR--TLSP----AVTSVGLLATTGTVRTGLYQQWLSEYSIDVLVPGPA 173
Query: 251 TMEHVIIPTIEALNHRDM--EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
+ +++P I A+ ++ E L+R LL+ V+ G E+ LP D
Sbjct: 174 IQDELVMPAIRAIKSGNVGDETTDKLVR-AADLLVESGAQVVVAGCTEIPLGLPADATTC 232
Query: 309 KKCIDPMDALARS 321
+ IDP LAR+
Sbjct: 233 -QIIDPATILARA 244
>gi|332158923|ref|YP_004424202.1| aspartate racemase [Pyrococcus sp. NA2]
gi|331034386|gb|AEC52198.1| aspartate racemase [Pyrococcus sp. NA2]
Length = 228
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 122/249 (48%), Gaps = 32/249 (12%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
IGI+GG+ +T + ++V + A+ ++ P ++ N+P + +
Sbjct: 3 VIGILGGMGPLATADLFRRIVEKTPAEKDQDHPKIIIFNNPQIPD--------------- 47
Query: 143 QLDHIRGAVSQNLRHKRAF----LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
+ +I G ++ R + + LE+ GA IVMPC+ +HA+ D+ + IP + + E
Sbjct: 48 RTAYILGK-GEDPRPQLIWTAKKLEECGADFIVMPCNTAHAFIEDIRKSVKIPVISMIEE 106
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIP 258
AK +K+ K ++G++AT T+ + Y +L G EV+ P + + V+
Sbjct: 107 TAKRVKDEGCK--------KVGLIATTGTIVSKVYHNELNKLGIEVLTPSEHEQDEVMKG 158
Query: 259 TIEALNHRDMEGARNLLRIGI-QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
+ + ++E R +L +GI + L R + +I G E+ V+ ++D L K IDPMD
Sbjct: 159 IYQGVKAGNLELGRKIL-LGIAKKLEERGADCIIAGCTEVSVVINQED-LKAKLIDPMDI 216
Query: 318 LARSTVTWA 326
+A V A
Sbjct: 217 IAEVAVKLA 225
>gi|332286031|ref|YP_004417942.1| aspartate/glutamate racemase [Pusillimonas sp. T7-7]
gi|330429984|gb|AEC21318.1| putative aspartate/glutamate racemase [Pusillimonas sp. T7-7]
Length = 240
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 12/175 (6%)
Query: 153 QNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLE 212
+RH +E+AGA I +PC+ +H W+ ++ S+ LH+ V +L+ +K
Sbjct: 72 NGVRH----MERAGAGVIAIPCNTAHLWYDKLAASTSLTVLHIVRSVVVDLQRNGIKR-- 125
Query: 213 AGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGAR 272
RIG+L T TLS+G YQ +L+ QG+E VL + + I + + A
Sbjct: 126 ----GRIGLLGTATTLSSGLYQRELEAQGYECVLLEHNDLLRYCAEAIRLVKVNQADAAL 181
Query: 273 NLLRIGIQLLLVRAVNAVIIGSDEMQGVL--PKDDPLLKKCIDPMDALARSTVTW 325
+QLL + V+AV++G E+ L P L ID +DALA + + W
Sbjct: 182 EPAVQCVQLLRQQGVDAVVLGCTELALALPAPARPSLGVAVIDSIDALALAALDW 236
>gi|4001718|dbj|BAA35091.1| aspartate racemase [Thermococcus sp. KS-8]
Length = 232
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 108/244 (44%), Gaps = 23/244 (9%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
IGI+GG+ +T + ++V + AK ++ P ++ N+P + + + +
Sbjct: 5 VIGILGGMGPLATADLFRRIVEKTPAKRDQDHPRIIIYNNPKIPDRTAFILGNGPDPRPE 64
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
+ R LE+ GA I+MPC+ +H + G + P + + E AK
Sbjct: 65 LITSARK------------LEECGADFIIMPCNTAHFFAGTIQSSVIYPLVSMIEETAKR 112
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
++E L+ ++G+LATD T+ Y L +G + +P+K V+ E
Sbjct: 113 IEEMGLR--------KVGLLATDGTIKGMVYHRALLKRGIHIAVPNKKDQGLVMKAIYEG 164
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARST 322
+ ++E R LL + + L R +I G E+ VL D L IDPMD +A
Sbjct: 165 VKAGNLELGRELL-LKVAKKLERRSEGIIAGCTEVSVVLKPGD-LTVPLIDPMDVIAERA 222
Query: 323 VTWA 326
V A
Sbjct: 223 VKLA 226
>gi|341581411|ref|YP_004761903.1| aspartate racemase [Thermococcus sp. 4557]
gi|340809069|gb|AEK72226.1| aspartate racemase [Thermococcus sp. 4557]
Length = 231
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 23/245 (9%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
IGI+GG+ +T + ++V + AK ++ P ++ NDP + + + +
Sbjct: 3 RVIGILGGMGPLATADLFRRIVEKTPAKRDQDHPRIIIYNDPKIPDRTAFILGNGGDPRP 62
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
++ R LE GA I+MPC+ +H + + IP + + E A+
Sbjct: 63 ALVEGARK------------LESWGADFIIMPCNTAHFFAETIQRAVKIPLVSMIEATAE 110
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
E++ L+ R+G+LATD T+ Y L +G + +P K E V+
Sbjct: 111 EIENLGLR--------RVGLLATDGTIKGLVYHRALLGRGVGIAVPGKNDQEKVMRAIYR 162
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARS 321
+ ++E R L + + L R V+ +I G E+ L +D L IDP+D +A
Sbjct: 163 GVKAGNLELGRRLF-LEVVRRLERRVDGIIAGCTEVSVALKPED-LSVPLIDPLDVIAEK 220
Query: 322 TVTWA 326
V A
Sbjct: 221 AVRLA 225
>gi|300725002|ref|YP_003714327.1| aspartate racemase [Xenorhabdus nematophila ATCC 19061]
gi|297631544|emb|CBJ92251.1| putative aspartate racemase [Xenorhabdus nematophila ATCC 19061]
Length = 230
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 111/242 (45%), Gaps = 23/242 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAE-ECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IGI+GG+ ++T++ + K++ + + + E P + + P + + AS+ L
Sbjct: 5 IGILGGMGPAATVDAMDKIIKNTPANCDQEHIPVIAVSFPDIPDRT--ASI--LAGGESP 60
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
+ + A+ LE AGA CI+MPC+ +H W+ ++ IPFL++ E ++
Sbjct: 61 FNKMLAALR--------ILEAAGAECIIMPCNTAHYWYDELKASTKIPFLNIVEVTCNKI 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ + +LAT T+ G YQ++L+ + V+PD + +I+ +I A
Sbjct: 113 VSEGIN--------NVAILATTGTIKIGLYQDRLRKENVNFVVPDD-IQQRIIMESILAY 163
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTV 323
D E A L+ I L V I+G E+ +L K+ ID L R V
Sbjct: 164 KSGDGEKAYQLIESVITQLKHVGVEHFIMGCTEIPLILSGCGD-KKEYIDATGELVRKAV 222
Query: 324 TW 325
W
Sbjct: 223 EW 224
>gi|254362765|ref|ZP_04978847.1| possible aspartate racemase [Mannheimia haemolytica PHL213]
gi|452744228|ref|ZP_21944076.1| aspartate racemase [Mannheimia haemolytica serotype 6 str. H23]
gi|153094394|gb|EDN75243.1| possible aspartate racemase [Mannheimia haemolytica PHL213]
gi|452087724|gb|EME04099.1| aspartate racemase [Mannheimia haemolytica serotype 6 str. H23]
Length = 231
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 117/251 (46%), Gaps = 27/251 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECP-PFVVCNDPALNEELFHASVHSLKSKT 141
N IGI+GG+ ++T + K + + D ++ P ++ + P + + + +
Sbjct: 4 NIIGILGGMGPAATADMFQKFIRLTPADCDQAHIPLLISSIPDIPDRTRYILANGENPAP 63
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
V +I G LE AGA CI++ C+ +H W + + L + +CV
Sbjct: 64 VMEKYIEG------------LESAGATCIIIACNTAHYWFEHLKAKSQVEMLSMIDCVVD 111
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
E+ L+ G R+G+LATDATL+ Y+++L+ QG + P + + ++ +I
Sbjct: 112 EV-------LKCGKW-RVGLLATDATLAVDLYKKQLEAQGLTFICPTE-NGQKAVMDSIY 162
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD---DPLLKKCIDPMDAL 318
L ++E A L+ L+ +I+G E+ +L ++ +P+ + +D L
Sbjct: 163 LLKSGELEKATELMLQQRDELIRLGAEVIILGCTEVPIILAQEIEREPM--RYVDSTLVL 220
Query: 319 ARSTVTWARSN 329
+ + W +++
Sbjct: 221 VKKAIDWYQTH 231
>gi|440288149|ref|YP_007340914.1| aspartate racemase [Enterobacteriaceae bacterium strain FGI 57]
gi|440047671|gb|AGB78729.1| aspartate racemase [Enterobacteriaceae bacterium strain FGI 57]
Length = 238
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 119/253 (47%), Gaps = 25/253 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G++GG+ +T++F+ KL+ + A ++ P VV N P + + A S Q
Sbjct: 7 LGVLGGMGPLATVDFMHKLLRATPATHDQQQIPHVVWNVPQIADRQ-RALAGEGPSPLPQ 65
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L H + Q L + G IV+ C+ +H W+ + + P LH+ + + +
Sbjct: 66 LLH---GIQQ--------LNRLGVSHIVIACNTAHHWYEALKQESDAPILHIADATLEAI 114
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
++ KP ++G++AT TL AG++Q++ G E +LP + + +P A+
Sbjct: 115 ED---KP------KKVGLIATQGTLDAGWFQQRFAAIGTESLLPTQDEITRWFVPGCYAV 165
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK-DDPLLKKCIDPMDALARST 322
D++ LL + + L R +++ E+ L P L + IDP +ALA+
Sbjct: 166 KRGDLQQGGELLTLQARALRERGAEKLVLACTEVPVALAAISSPYLNEAIDPAEALAQQC 225
Query: 323 VT-W-ARSNKKLT 333
T W +R N ++
Sbjct: 226 ATLWLSRRNDRIN 238
>gi|349587721|pdb|3S7Z|A Chain A, Crystal Structure Of Putative Aspartate Racemase From
Salmonella Typhimurium Complexed With Succinate
gi|349587722|pdb|3S7Z|B Chain B, Crystal Structure Of Putative Aspartate Racemase From
Salmonella Typhimurium Complexed With Succinate
Length = 268
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 26/249 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+TIGI+GG ++T + L K V +++ D + P L +S+ + +
Sbjct: 27 HTIGILGGXGPAATADXLEKFVELRHASCDQQHIP-------------LIVSSIPDIPDR 73
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
T L + + L LE AGA CIV+PC+ +H W D+ +V +
Sbjct: 74 TACLLSGGPSPYRYLERYLHXLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARX 125
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ +A L + S +G+LAT+ATL+ G YQ+K +G ++ P+ A + ++ I
Sbjct: 126 ISILDATLGDIPP-SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QALVXQAI 183
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALA 319
L D A+ LL I L+ R A+I G E+ ++ + + ID +L
Sbjct: 184 YTLKRGDKTAAQALLLPQIDSLIARGAQAIIXGCTEIPLIVAGHERAIACPXIDSTASLV 243
Query: 320 RSTVTWARS 328
R+ + W S
Sbjct: 244 RAAIRWYES 252
>gi|261492724|ref|ZP_05989272.1| putative aspartate racemase [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261495661|ref|ZP_05992107.1| putative aspartate racemase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261308768|gb|EEY10025.1| putative aspartate racemase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311577|gb|EEY12732.1| putative aspartate racemase [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 231
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 117/251 (46%), Gaps = 27/251 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECP-PFVVCNDPALNEELFHASVHSLKSKT 141
N IGI+GG+ ++T + K + + D ++ P ++ + P + + + +
Sbjct: 4 NIIGILGGMGPAATADMFQKFIRLTPADCDQAHIPLLISSIPDIPDRTRYILANGENPAP 63
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
V +I G LE AGA CI++ C+ +H W + + L + +CV
Sbjct: 64 VMEKYIEG------------LESAGATCIIIACNTAHYWFEHLKAKSQVEMLSMIDCVVD 111
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
E+ L+ G R+G+LATDATL+ Y+++L+ QG + P + + ++ +I
Sbjct: 112 EV-------LKCGKR-RVGLLATDATLAVELYKKQLEAQGLTFICPTE-NGQKAVMDSIY 162
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD---DPLLKKCIDPMDAL 318
L ++E A L+ L+ +I+G E+ +L ++ +P+ + +D L
Sbjct: 163 LLKSGELEKATELMLQQRDELIRLGAEVIILGCTEVPIILAQEIEREPM--RYVDSTLVL 220
Query: 319 ARSTVTWARSN 329
+ + W +++
Sbjct: 221 VKKAIDWYQTH 231
>gi|355574231|ref|ZP_09044074.1| hypothetical protein HMPREF1008_00051 [Olsenella sp. oral taxon 809
str. F0356]
gi|354818521|gb|EHF03010.1| hypothetical protein HMPREF1008_00051 [Olsenella sp. oral taxon 809
str. F0356]
Length = 242
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 22/248 (8%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GIIGGV +T F+ ++ + A ++ P +V NDP + + +
Sbjct: 6 LGIIGGVGPLATAYFMEAIIKKTPAATDQDNIPMIVFNDPQIPDRTAYI----------- 54
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
LDH R +R +LE AGA + + C+ +H ++ +S+ +P L++ E AK +
Sbjct: 55 LDHSRPDPQPEMRKVARWLEDAGADYLAIACNTAHYFYDAISDAVDVPVLNIMEETAKHI 114
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
L+ G G R+G++ATD T+ +G +Q L +G V+P T ++ + +
Sbjct: 115 A------LDVGRGGRVGLMATDGTVQSGVFQGYLAERGLVGVVPRAQTQRRIMSLIYDGV 168
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTV 323
L I + L +AV++G E+ + D +D LA+ V
Sbjct: 169 KANAPYDPGELCAIA-EELRQEGCDAVVVGCTELSVIYQDLAERPTWLYDSLDVLAQRCV 227
Query: 324 T---WARS 328
WAR
Sbjct: 228 DLYLWARE 235
>gi|337284158|ref|YP_004623632.1| aspartate racemase [Pyrococcus yayanosii CH1]
gi|334900092|gb|AEH24360.1| aspartate racemase [Pyrococcus yayanosii CH1]
Length = 226
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 23/245 (9%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVW-YSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
TIGI+GG+ +T ++V A+ ++ P +V ++P + + +
Sbjct: 2 KTIGILGGMGPLATAELFRRIVEKVPARRDQDHPKVIVISNPQIPDRTAFILGYG----- 56
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+ R A+ + + LE GA I+MPC+ +HA+ D+ IP + + E A+
Sbjct: 57 ---EDPRPALVETAKR----LEACGADFIIMPCNTAHAFIEDIQRAVKIPVVSMVEETAR 109
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
++ E +K R G+LAT T+ + Y+ L EVV+PD+ E V+ E
Sbjct: 110 KIAEMGVK--------RAGLLATTGTVVSRVYERALARWAVEVVVPDEEGQEKVMRAIYE 161
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARS 321
+ ++E R L+ + + L V+ VI G E+ VL D L +DPMD +A
Sbjct: 162 GVKAGNIELGRRLI-LEVARSLEGRVDCVIAGCTEVSLVL-HDGDLSVPIVDPMDVIAER 219
Query: 322 TVTWA 326
V A
Sbjct: 220 AVRLA 224
>gi|187478383|ref|YP_786407.1| aspartate racemase [Bordetella avium 197N]
gi|115422969|emb|CAJ49499.1| aspartate racemase [Bordetella avium 197N]
Length = 243
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 93/178 (52%), Gaps = 14/178 (7%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIG 220
L +GAR I +PC+ +H W+ ++ LH+ E VA++L+ + + G RIG
Sbjct: 74 MLNASGARAIAVPCNTAHLWYEQMAAASDCEVLHIIEAVAQDLRR---QGIHRG---RIG 127
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQ 280
++ T ATLS G YQ+ L+ G+ ++P + ++ + + +I A+ +E + IQ
Sbjct: 128 LMGTAATLSMGLYQQTLEKHGYTCIVPTEEEIDTLCMASIRAVKANQLEESFAPAVECIQ 187
Query: 281 LLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCI-----DPMDALARSTVTWARSNKKLT 333
L R +AV++G E+ +P L+K + D +DALA + + ++ + L+
Sbjct: 188 RLRTRGADAVVLGCTELPLAVPHA---LRKGLGIPLTDSIDALALAAIEHYQAAEALS 242
>gi|421694401|ref|ZP_16134026.1| aspartate racemase [Acinetobacter baumannii WC-692]
gi|424060430|ref|ZP_17797921.1| aspartate racemase [Acinetobacter baumannii Ab33333]
gi|404568403|gb|EKA73507.1| aspartate racemase [Acinetobacter baumannii WC-692]
gi|404668382|gb|EKB36291.1| aspartate racemase [Acinetobacter baumannii Ab33333]
Length = 241
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 22/257 (8%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCNDPALNEELFHASVHS 136
+Q T+GI+GG+ + ++F +L+ S KD E P +V N H +
Sbjct: 4 FSQLPTLGILGGMGPGAAVDFQQRLLDTSPATKDQEHIPT-IVWN---------HGGI-- 51
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
+ + L ++ + + H LE++G I +PC+ +H WH D+ + I L++
Sbjct: 52 -PDRQLALKNLGESPLNAMLHGLKILERSGVSKIAIPCNTAHFWHSDLQQHTHIQILNMV 110
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
E +++ LK ++G ++G+LAT LS YQ +L ++ +E
Sbjct: 111 EITVQQI----LKNYQSGD--KVGILATKGALSTQLYQIELSKHSIPFIINSDEEIEQEF 164
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQ-GVLPKDDPLLKKCIDPM 315
+P + A+ + A + + Q L+ + ++I+ E+ G+ P+L D
Sbjct: 165 MPAVYAVKRNETAKAGIVFQELSQRLIDKGAGSIILACTEIPIGLHAIQSPILDVSFDTT 224
Query: 316 DALARSTVTWARSNKKL 332
LA + V W N +L
Sbjct: 225 QILADACVNWFYRNTQL 241
>gi|171321276|ref|ZP_02910240.1| aspartate racemase [Burkholderia ambifaria MEX-5]
gi|171093448|gb|EDT38627.1| aspartate racemase [Burkholderia ambifaria MEX-5]
Length = 233
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 111/251 (44%), Gaps = 39/251 (15%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IG++GG+ +T++F+ +++ + A+ +E P +V N T
Sbjct: 4 IGVLGGMGPLATVDFMHRVIRLTRARCDQEHLPMIVAN------------------LTQT 45
Query: 144 LDHIRGAVSQN------LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
D +R V L A L + G I +PC+ +H W+ + E ++P LH+
Sbjct: 46 PDRVRAIVDGGTDPLPALLDGVALLNRCGVDVIAIPCNTAHHWYAPLRERSAVPILHI-- 103
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+A + L AG R+ VLAT TL +G YQ L+ +GFE V+P A I+
Sbjct: 104 ------VDASVAALPAGLR-RVAVLATGGTLVSGLYQAALRARGFEPVMPGVAAQRD-IV 155
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDE--MQGVLPKDDPLLKKCIDPM 315
I A+ ++ + L + L R V ++G E + +D P ID
Sbjct: 156 ACIAAVKAGKIDASARCLTRALATLARRDVGVAVMGCTEIPIAARALRDAPF--ALIDST 213
Query: 316 DALARSTVTWA 326
LAR+TV +A
Sbjct: 214 QELARATVAYA 224
>gi|302391310|ref|YP_003827130.1| aspartate racemase [Acetohalobium arabaticum DSM 5501]
gi|302203387|gb|ADL12065.1| aspartate racemase [Acetohalobium arabaticum DSM 5501]
Length = 248
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 118/254 (46%), Gaps = 33/254 (12%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
T+GI+GG+ +T+N K++ ++ + ++ + N+ N ++ + + L
Sbjct: 4 TVGILGGMGPQATVNLFQKVINFTDAECDQDHIQALINN---NPQIPDRTEYILGDGEDL 60
Query: 144 LDH-IRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
H I+GA+ L+Q GA + MPC+ +H ++ +V IPFL++ E VA E
Sbjct: 61 TPHLIKGAIK---------LQQLGADYLAMPCNTAHYFYDEVVRYMDIPFLNMIEEVAAE 111
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME---HVIIPT 259
+ + G+ ++G+LAT T G Y++ LQ G ++ PD++ E VI
Sbjct: 112 VDR------KYGNDSKVGLLATTGTYQVGIYEKVLQESGVNLITPDESGKEAVYDVIYKV 165
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA-- 317
E + + NLL + + V+ VI+G E LP L ID MD
Sbjct: 166 KEGFDDIKFQSVNNLLA----EMKKQGVSVVILGCTE----LPLIKDKLDSEIDYMDCTE 217
Query: 318 -LARSTVTWARSNK 330
LA+ V +A +
Sbjct: 218 ILAQRIVDYASDQE 231
>gi|354598328|ref|ZP_09016345.1| aspartate racemase [Brenneria sp. EniD312]
gi|353676263|gb|EHD22296.1| aspartate racemase [Brenneria sp. EniD312]
Length = 238
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 115/247 (46%), Gaps = 31/247 (12%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEE----LFHASVHSLKSK 140
+GI+GG+ +T++ + KL+ N PA ++ + S+ + +
Sbjct: 5 VGILGGMGPGATVDAMQKLIK---------------NTPAYRDQDHIPMIAVSIPDIPDR 49
Query: 141 T-VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
T LDH + + +++ + LE AGA CI++PC+ +H W ++ + + + +
Sbjct: 50 TQCILDHSASPLEKMIQYMK-ILENAGAECIIIPCNTAHYWFNELKLHSRVEMISIIDAA 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+ +++ K+ + +LAT AT+ A YQ L G + +P A + ++ +
Sbjct: 109 CQVIRDKKI--------ASVALLATTATIKAQIYQRHLAESGIDCHIPPAAE-QSAVMES 159
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL-KKCIDPMDAL 318
I A D + A +LL LL V +I+G E+ +L ++ L + ID +AL
Sbjct: 160 IYAYKSGDAQRAHSLLTPIKDRLLQSGVEKIILGCTELPLILQQEIKLAPENYIDATEAL 219
Query: 319 ARSTVTW 325
+ TV W
Sbjct: 220 IKKTVEW 226
>gi|307130332|ref|YP_003882348.1| aspartate racemase [Dickeya dadantii 3937]
gi|306527861|gb|ADM97791.1| Probable aspartate racemase [Dickeya dadantii 3937]
Length = 256
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 18/247 (7%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G++GG+ +T++ L K++ + A+ ++ P V N P + + +
Sbjct: 10 VGVLGGMGPLATVDLLQKIIAATPAERDQQHVPVAVWNVPQIPDRQRALAGIGASPLPAL 69
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
LD + ++ H +++PC+ +H W ++ P LH+ + +
Sbjct: 70 LDGVERLNRLDISH------------LIIPCNTAHHWFDELQAASRAPVLHIADVTLIQA 117
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ A L S R+G++AT TL+AG+YQ +L E VLPD+ M+++ +P A+
Sbjct: 118 QAA----LADTSSPRVGLIATHGTLAAGWYQRRLAALDIETVLPDEQEMDNLFVPGCYAV 173
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQ-GVLPKDDPLLKKCIDPMDALARST 322
D+ L + L R +I+ E+ G+ L + ID +ALAR
Sbjct: 174 KRGDVAAGGGLFGQLAERLAARGATHLILACTEVAPGLAAMQSRWLARSIDSTEALARHC 233
Query: 323 VTWARSN 329
V R
Sbjct: 234 VALWREQ 240
>gi|402569266|ref|YP_006618610.1| aspartate racemase [Burkholderia cepacia GG4]
gi|402250463|gb|AFQ50916.1| aspartate racemase [Burkholderia cepacia GG4]
Length = 233
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 33/248 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCN---DPALNEELFHASVHSLKSK 140
+G++GG+ +T++F+ +++ + A+ +E P +V N P + + L +
Sbjct: 4 VGVLGGMGPLATVDFMHRVIRLTRARCDQEHLPMIVANLTQTPDRSRAIVDGGADPLPA- 62
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
LD + L + G I +PC+ +H W+ + E + P LH+
Sbjct: 63 --LLDGV------------GLLNRCGVDVIAIPCNSAHHWYEPMRERSAAPILHI----- 103
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+A + L AG R+ VLAT TL +GFYQ L+ +GFE V+P A I I
Sbjct: 104 ---VDASVAALPAGVR-RVAVLATGGTLVSGFYQAALRARGFEPVMPGAAAQRD-IAACI 158
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDE--MQGVLPKDDPLLKKCIDPMDAL 318
A+ ++ + L + L+ R V ++G E + +D P ID L
Sbjct: 159 AAVKAGRIDASVRCLSRALATLVRRDVGVAVMGCTEIPIAARALRDAPF--ALIDSTQEL 216
Query: 319 ARSTVTWA 326
AR+TVT+A
Sbjct: 217 ARATVTYA 224
>gi|223477144|ref|YP_002581435.1| aspartate racemase [Thermococcus sp. AM4]
gi|214032370|gb|EEB73200.1| Aspartate racemase [Thermococcus sp. AM4]
Length = 234
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 107/245 (43%), Gaps = 23/245 (9%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
TIGI+GG+ +T ++V + AK ++ P ++ N+P + + +
Sbjct: 3 RTIGILGGMGPLATAELFRRIVVKTPAKRDQDHPRIIIYNNPKIPDRTAFILGKGPDPRP 62
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+D + LE GA I+MPC+ +H + + IP + + E A+
Sbjct: 63 ELIDSAKK------------LESWGADFIIMPCNTAHFFAETIQRAIRIPLVSMVEETAE 110
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
+KE L+ ++G+LATD T+ Y L +G + +P K V+ E
Sbjct: 111 RVKEMGLR--------KVGLLATDGTVKGLVYHRALLKRGISIAVPGKNDQRLVMRGIYE 162
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARS 321
+ ++E R LL + + L + V +I G E+ L +D L IDPMD +A
Sbjct: 163 GVKAGNLELGRELL-LKVAKKLEKRVEGIIAGCTEVSVALRPED-LSVPLIDPMDVIAEK 220
Query: 322 TVTWA 326
V A
Sbjct: 221 AVKLA 225
>gi|170703014|ref|ZP_02893844.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
gi|170132072|gb|EDT00570.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
Length = 233
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 33/248 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCN---DPALNEELFHASVHSLKSK 140
+G++GG+ +T++F+ +++ + A+ +E P +V N P + + L +
Sbjct: 4 VGVLGGMGPLATVDFMHRVICLTRARCDQEHLPMIVANLTQTPDRSRAIIDGGTDPLPA- 62
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
LD + A L + G I +PC+ +H W+ + E + P LH+
Sbjct: 63 --LLDGV------------ALLNRCGVDVIAIPCNSAHHWYAPLRERSAAPVLHI----- 103
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+A + + AG R+ VLAT TL +GFYQ L+ +GFE V+P A I I
Sbjct: 104 ---VDASVAAVPAGVR-RVAVLATGGTLVSGFYQAALRARGFEPVMPAVAAQRD-IAACI 158
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDE--MQGVLPKDDPLLKKCIDPMDAL 318
A+ ++ + L + L R V ++G E + + +D P ID L
Sbjct: 159 AAVKAGKIDASVRRLSRALATLARRDVGVAVMGCTEIPLAARVLRDAPF--ALIDSTQEL 216
Query: 319 ARSTVTWA 326
AR+TV +A
Sbjct: 217 ARATVAYA 224
>gi|421656776|ref|ZP_16097073.1| aspartate racemase [Acinetobacter baumannii Naval-72]
gi|408503769|gb|EKK05522.1| aspartate racemase [Acinetobacter baumannii Naval-72]
Length = 241
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 110/252 (43%), Gaps = 22/252 (8%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
T+GI+GG+ + ++F +L+ S KD E P +V N H + +
Sbjct: 9 TLGILGGMGPGAAVDFQQRLLDTSPATKDQEHIPT-IVWN---------HGGI---PDRQ 55
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+ L ++ + + H LE++G I +PC+ +H WH D+ + I L++ E +
Sbjct: 56 LALKNLGESPLNAMLHGLKILERSGVSKIAIPCNTAHFWHSDLQQHTHIQILNMVEITVQ 115
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
++ + SG +IG+LAT LS YQ +L ++ +E +P +
Sbjct: 116 QIL------MNYQSGDKIGILATKGALSTQLYQIELSKHSIPFIINSDEEIEQEFMPAVY 169
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQ-GVLPKDDPLLKKCIDPMDALAR 320
A+ + A + + Q L+ + ++I+ E+ G+ P+L D LA
Sbjct: 170 AVKRNETAKAGIVFQELSQRLIDKGAGSIILACTEIPIGLHAIQSPILDVSFDTTKILAD 229
Query: 321 STVTWARSNKKL 332
+ V W N +
Sbjct: 230 ACVNWFYRNTQF 241
>gi|172063017|ref|YP_001810668.1| aspartate racemase [Burkholderia ambifaria MC40-6]
gi|171995534|gb|ACB66452.1| aspartate racemase [Burkholderia ambifaria MC40-6]
Length = 233
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 33/248 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCN---DPALNEELFHASVHSLKSK 140
+G++GG+ +T++F+ +++ + A+ +E P +V N P + + L +
Sbjct: 4 VGVLGGMGPLATVDFMHRVIRLTRARCDQEHLPMIVANLTRTPDRSRAILDGGADPLPA- 62
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
LD + A L + G I +PC+ +H W+ + E + P LH+
Sbjct: 63 --LLDGV------------ALLNRCGVDVIAIPCNSAHHWYAPLRECSAAPVLHI----- 103
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+A + + AG R+ VLAT TL +GFYQ L+ +GFE V+P T + I I
Sbjct: 104 ---VDASVAAVPAGVR-RVAVLATGGTLVSGFYQAALRARGFEPVMP-AVTAQRDIAACI 158
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDE--MQGVLPKDDPLLKKCIDPMDAL 318
A+ ++ + L + L R V ++G E + +D P ID L
Sbjct: 159 AAVKAGKVDASVRRLSRALATLARRDVGVAVMGCTEIPIAARALRDAPF--ALIDSTQEL 216
Query: 319 ARSTVTWA 326
AR+TV +A
Sbjct: 217 ARATVAYA 224
>gi|319784854|ref|YP_004144330.1| aspartate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317170742|gb|ADV14280.1| aspartate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 265
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 23/243 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSA--KDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
+GIIGG+ ++ +F KL + +D E P ++ S+ L +T
Sbjct: 10 LGIIGGLGPLASADFYFKLTRMTQAFRDNEHVPAVIL-------------SIPQLPDRTE 56
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
+ L+ A L G C+ MPC+ +H W+ ++ +H+G+ V E
Sbjct: 57 AILAGHDGPLAPLKAAVATLNALGVACVAMPCNTAHHWYDQLAANSRAEIIHIGDAVVAE 116
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
+ + LE G R+ VLAT TL +GFYQ+++ GFE+ LP + + I
Sbjct: 117 TR----RSLERG---RVAVLATQGTLVSGFYQDRMSAAGFELCLPSNTEFQACVDSAISL 169
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK-DDPLLKKCIDPMDALARS 321
+ + A + + +A ++G E+ V +D ID ALAR+
Sbjct: 170 VKAGSIVDAAVETERALDIAQATGADAALLGCTELSVVAASLNDVNGLVVIDSNAALARA 229
Query: 322 TVT 324
+T
Sbjct: 230 CLT 232
>gi|299770779|ref|YP_003732805.1| aspartate racemase [Acinetobacter oleivorans DR1]
gi|298700867|gb|ADI91432.1| aspartate racemase [Acinetobacter oleivorans DR1]
Length = 241
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 22/252 (8%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
T+GI+GG+ + ++F +L+ S KD E P A N H + +
Sbjct: 9 TLGILGGMGPGAAVDFQQRLLDASPATKDQEHIPTI------AWN----HGGI---PDRQ 55
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+ L ++ + + H LE++G I +PC+ +H WH D+ + I L++ E +
Sbjct: 56 LALKNLGESPLNAMLHGLKILERSGVSKIAIPCNTAHFWHSDLQQHTPIEILNMVEITVQ 115
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
++ LK ++G ++G+LAT LS YQ +L V+ +E +P +
Sbjct: 116 QI----LKNYQSGD--KVGILATKGALSTQLYQHELSKHDIPFVINSDEEIEQEFMPAVY 169
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQ-GVLPKDDPLLKKCIDPMDALAR 320
A+ + A + + Q L+ + ++I+ E+ G+ P+L D LA
Sbjct: 170 AVKRNESAKAGIVFQELSQRLIDQGAGSIILACTEIPIGLHAIQSPILDVSFDTTQILAD 229
Query: 321 STVTWARSNKKL 332
+ V W N +L
Sbjct: 230 ACVHWFYRNTQL 241
>gi|390962188|ref|YP_006426022.1| putative aspartate racemase 2 [Thermococcus sp. CL1]
gi|390520496|gb|AFL96228.1| putative aspartate racemase 2 [Thermococcus sp. CL1]
Length = 235
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 23/245 (9%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
IGI+GG+ +T ++V + AK +E P ++ N+P + + +
Sbjct: 4 KVIGILGGMGPLATAELFRRIVEKTPAKRDQEHPRIIIYNNPKIPDRTAFILGKGEDPRP 63
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+D R LE GA I+MPC+ +H + + IP + + E A+
Sbjct: 64 ELIDSARK------------LESWGADFIIMPCNTAHFFAETIQRAIRIPLVSMVEETAE 111
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
+ L+ ++G+LATD T+ Y L +G +V +P++ V+ +
Sbjct: 112 RIARMGLR--------KVGLLATDGTIKGLVYHRALLRRGIQVAVPNRKDQGLVMKAIYD 163
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARS 321
+ ++E R LL + + L R V+ +I G E+ L +D L IDP+D +A
Sbjct: 164 GVKAGNVELGRKLL-LDVARRLERRVDGIIAGCTEVSVALKPED-LKVPLIDPLDVIAER 221
Query: 322 TVTWA 326
V A
Sbjct: 222 VVKLA 226
>gi|375308738|ref|ZP_09774021.1| aspartate racemase [Paenibacillus sp. Aloe-11]
gi|375079365|gb|EHS57590.1| aspartate racemase [Paenibacillus sp. Aloe-11]
Length = 230
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 117/247 (47%), Gaps = 30/247 (12%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
T+GI+GG+ +T++ + K++ + A++ ++ +V N P + +
Sbjct: 4 TVGIMGGMGPLATVDLMNKIIRLTPAQNDQDHIHMIVDNYPQIPD--------------- 48
Query: 143 QLDHIRGAVSQNL---RHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+ I G S L + LE AGA IV+ C+ +H + ++ E P +++ +
Sbjct: 49 RTSAIMGKGSDPLPFMKQSAKRLEDAGADLIVIACNTAHYYLQNIQETVRTPIVNMPKET 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
A + EA ++ R+ +LATD TL YQ L+ +G V+ PD+ T + +++
Sbjct: 109 ASFIGEAGIR--------RVSLLATDGTLKTLLYQNALREKGITVLEPDEIT-QAIVMEG 159
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALA 319
I ++ +E + LL Q ++ + AV+ E+ VL + D + K IDP LA
Sbjct: 160 IYSVKAGHIEKGKRLLVNAFQTMIAKGTEAVVAACTEIPIVLNEVDGI--KVIDPTYILA 217
Query: 320 RSTVTWA 326
+ V A
Sbjct: 218 KKVVDVA 224
>gi|186470782|ref|YP_001862100.1| aspartate racemase [Burkholderia phymatum STM815]
gi|184197091|gb|ACC75054.1| aspartate racemase [Burkholderia phymatum STM815]
Length = 233
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 114/251 (45%), Gaps = 39/251 (15%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEE---LFHASVHSLKSK 140
IGI+GG+ +T++F+ K+V + A +E P +V N P + + + V L +
Sbjct: 4 IGILGGMGPLATVDFMDKVVRLTEASRDQEHLPLLVANLPHIEDRSSAILENGVDPLPAL 63
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE-CV 199
+D L + I +PC+ +H W+ + + P L++ E CV
Sbjct: 64 LAGID---------------MLNRNSVGLIAIPCNSAHHWYAQICAHSAAPVLNIAEICV 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
A AK R+ VLAT L +GFYQ L + E V PD+ T++ ++
Sbjct: 109 AAVPPTAK----------RVAVLATGGALVSGFYQRALAERDIEPVTPDE-TVQPLVAVC 157
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM----QGVLPKDDPLLKKCIDPM 315
I+A+ D++ A L + +L+ + V ++ E+ Q + PL+ ++
Sbjct: 158 IDAVKSGDLDAAAMHLETALAMLVKQGVTMALLACTEIPLAAQRIAAPALPLIDSSLE-- 215
Query: 316 DALARSTVTWA 326
LAR+TV +A
Sbjct: 216 --LARATVKYA 224
>gi|422008326|ref|ZP_16355310.1| aspartate racemase [Providencia rettgeri Dmel1]
gi|414094799|gb|EKT56462.1| aspartate racemase [Providencia rettgeri Dmel1]
Length = 242
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIG 220
LE AG CI+MPC+ +H W+ D+ + I F+ + ++ + +K ++
Sbjct: 70 ILENAGVSCIIMPCNTAHFWYEDLIKETEIHFISIINAACNKILKDNVK--------KVA 121
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQ 280
+LAT AT+ YQ KL G E + PD+ ++ I+ +I + D A+ L+ I
Sbjct: 122 LLATTATIQTKLYQNKLSLHGVECIEPDEMN-QYKIMQSIISYKSGDFRKAKKLIYPYIN 180
Query: 281 LLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCIDPMDALARSTVTW 325
L V+ ++G E+ +L KD P ++ ID +AL + W
Sbjct: 181 QLKSIGVDKFVMGCTEIPLILEDVSKDSP--EQFIDATEALINEAIDW 226
>gi|390570421|ref|ZP_10250686.1| aspartate racemase [Burkholderia terrae BS001]
gi|389937601|gb|EIM99464.1| aspartate racemase [Burkholderia terrae BS001]
Length = 491
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 37/262 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
+G++GGV ++T++F+ K+V + A+D + +V +P + +
Sbjct: 221 LGVVGGVGPAATVDFMHKVVRNTPAARDQDHIK-VIVEQNPQIPD--------------- 264
Query: 143 QLDHIRGAVSQ---NLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+ DH+ G + L LE GA I +PC+ +HA+ G + +P +++
Sbjct: 265 RTDHLTGDGADPTLALYATCKKLEDGGADLIAIPCNTAHAFIGPIEARLRVPIINMMNVT 324
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
A L+ A ++ RIG+LATD T+++G Y+ L+ +G VLP A V+
Sbjct: 325 ADYLRTA-FPAVD-----RIGLLATDGTIASGVYRTALEARGMTQVLPPLAMQARVMNAI 378
Query: 260 IEALNHR----DMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK----- 310
A + + E A +++ ++ LL++ V +++ E+ + P+ + +K
Sbjct: 379 YGARGVKAGFTNGECADDII-AAVESLLLQQVEVILLACTELPLLFPQAATVTRKGRSAH 437
Query: 311 CIDPMDALARSTVTWARSNKKL 332
+DP D LAR V +AR ++
Sbjct: 438 LVDPTDVLARCCVEFARGTPRV 459
>gi|115358254|ref|YP_775392.1| aspartate racemase [Burkholderia ambifaria AMMD]
gi|115283542|gb|ABI89058.1| aspartate racemase [Burkholderia ambifaria AMMD]
Length = 233
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 33/248 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCN---DPALNEELFHASVHSLKSK 140
+G++GG+ +T++F+ +++ + A+ +E P +V N P + + L +
Sbjct: 4 VGVLGGMGPLATVDFMHRVIRLTRARCDQEHLPMIVANLTRTPDRSRAILDGGADPLPA- 62
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
LD + A L + G I +PC+ +H W+ + E + P LH+
Sbjct: 63 --LLDGV------------ALLNRCGVDVIAIPCNSAHHWYAPLRERSAAPVLHI----- 103
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+A + + AG R+ VLAT TL +GFYQ L+ +GFE V+P A I I
Sbjct: 104 ---VDASVAAVPAGVR-RVAVLATGGTLVSGFYQAALRARGFEPVMPAVAAQRD-IAACI 158
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDE--MQGVLPKDDPLLKKCIDPMDAL 318
A+ ++ + L + L R V ++G E + +D P ID L
Sbjct: 159 AAVKAGKIDASVRRLSRALATLARRDVGVAVMGCTEIPIAARALRDAPF--ALIDSTQEL 216
Query: 319 ARSTVTWA 326
AR+TV +A
Sbjct: 217 ARATVAYA 224
>gi|418824052|ref|ZP_13379436.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|392825148|gb|EJA80904.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
Length = 234
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIG 220
LE AGA CIV+PC+ +H W D+ +V + + +A L + S +G
Sbjct: 60 MLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARMISILDATLGDIPP-SARHVG 110
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQ 280
+LAT+ATL+ G YQ+K +G ++ P++A + +++ I L D A+ LL I
Sbjct: 111 LLATNATLATGLYQKKALARGLTLIQPEEAG-QALVMQAIYTLKRGDKTAAQALLLPQID 169
Query: 281 LLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALARSTVTWARS 328
L+ R A+I+G E+ ++ + + ID +L R+ + W S
Sbjct: 170 SLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRAAIRWYES 218
>gi|452128656|ref|ZP_21941233.1| aspartate racemase [Bordetella holmesii H558]
gi|451925703|gb|EMD75841.1| aspartate racemase [Bordetella holmesii H558]
Length = 256
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 104/219 (47%), Gaps = 19/219 (8%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GI+GG+ + F +L + A ++ P ++ NDP + + T +
Sbjct: 18 LGILGGMGPLAGAAFAMRLAALTPASIDQQHIPALLLNDPRIPDR-----------STAR 66
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L LR R L AGA+ I +PC+ +H W+ +++ LH+ E VA++L
Sbjct: 67 LYGGADPWPAMLRGIRT-LNNAGAKLIAVPCNTAHLWYEQMAQASECEVLHIIEAVAQDL 125
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
K + + R+G++ T ATL G YQ+ L+ G+ ++P + ++ + + +I A+
Sbjct: 126 KRQGI------TRGRVGLMGTAATLGLGLYQQTLEKHGYTCIVPTEEEIDTLCMASIRAV 179
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP 302
+E + I+ L R +AV++G E+ +P
Sbjct: 180 KGNQVEESFAPAAECIERLRTRGADAVVLGCTELPLAVP 218
>gi|205355237|ref|YP_002229038.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|375126150|ref|ZP_09771314.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|205275018|emb|CAR40102.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326630400|gb|EGE36743.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
Length = 240
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 26/247 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
+G GG+ ++T + L K V +++ D + P L +S+ + +T
Sbjct: 1 MGYWGGMGPAATADMLEKFVELRHASCDQQHIP-------------LIVSSIPDIPDRTA 47
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
L + + L LE AGA CIV+PC+ +H W D+ +V +
Sbjct: 48 CLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARMIS 99
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
+ +A L + S +G+LAT+ATL+ G YQ+K +G ++ P++A + +++ I
Sbjct: 100 ILDATLGDIPP-SARHVGLLATNATLATGLYQKKALARGLTLIQPEEAG-QALVMQAIYT 157
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALARS 321
L D A+ LL I L+ R A+I+G E+ ++ + + ID +L R+
Sbjct: 158 LKRGDKTVAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRA 217
Query: 322 TVTWARS 328
+ W S
Sbjct: 218 AIRWYES 224
>gi|452947440|gb|EME52928.1| aspartate racemase [Amycolatopsis decaplanina DSM 44594]
Length = 277
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 124/271 (45%), Gaps = 27/271 (9%)
Query: 74 SPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCNDPALNEELFH 131
P L + +G++GG+ ++T +F +LV + D + + C DP + +
Sbjct: 16 DPAHLRSAGPLVGVLGGMGPAATADFYTRLVRETPATTDQDHLRVLLWC-DPTVPDR-SR 73
Query: 132 ASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
A + T L +RGA L AG+ I +PC+ +HA+ V+E +P
Sbjct: 74 ALLEGGTDPTPWL--LRGA---------RVLAAAGSDVIAVPCNTAHAFLPAVAEEAGVP 122
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
+H+ E + L A+ P S R+G+LAT TL Y L + G V+ PD +
Sbjct: 123 LVHMTERTGRYL--ARHHP----SVRRVGLLATTGTLRTKLYDGWLTDAGISVLEPDPVS 176
Query: 252 MEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC 311
++ I ++ + E + LLR + L+ R AVI G E+ L D LL
Sbjct: 177 QADEVMAAIRSI--KAGETSSQLLRTAARRLVGRGAQAVIAGCSEVPLGLDSRD-LLVPL 233
Query: 312 IDPMDALARSTVTW---ARSNKKLTLLLDSQ 339
IDP+ L R+ V AR+++ +LD++
Sbjct: 234 IDPVQVLVRTLVALHLSARASEPRRDILDAE 264
>gi|417338520|ref|ZP_12120322.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|353561147|gb|EHC28168.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
Length = 175
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIG 220
LE AGA CIV+PC+ +H W D+ +V + + +A L + S +G
Sbjct: 1 MLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARMISILDATLGDIPP-SARHVG 51
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQ 280
+LAT+ATL+ G YQ+K +G ++ P++A + +++ I L D A+ LL I
Sbjct: 52 LLATNATLATGLYQKKALARGLTLIQPEEAG-QALVMQAIYTLKRGDKTAAQALLLPQID 110
Query: 281 LLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALARSTVTWARS 328
L+ R A+I+G E+ ++ + + ID +L R+ + W S
Sbjct: 111 SLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRAAIRWYES 159
>gi|157146318|ref|YP_001453637.1| hypothetical protein CKO_02076 [Citrobacter koseri ATCC BAA-895]
gi|157083523|gb|ABV13201.1| hypothetical protein CKO_02076 [Citrobacter koseri ATCC BAA-895]
Length = 239
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 21/238 (8%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GI+GG+ +TL+ + KL+ + A ++ P VV N P + + A + S Q
Sbjct: 7 LGILGGMGPLATLDLMHKLLRATPASSDQQQIPHVVWNVPQIADRQ-QALAGTGPSPLPQ 65
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L + G V Q L +AGA IV+ C+ +H W+ +++ P LH+ + +
Sbjct: 66 L--LLG-VEQ--------LNRAGASHIVIACNTAHHWYEALAQHSDAPLLHIVDATLA-V 113
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
E K KP R+G++AT TL AG++Q + G E V P + +P A+
Sbjct: 114 FEGKEKPR------RVGLIATQGTLDAGWFQHGFASMGIESVQPTPEELRQWFVPGCYAV 167
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK-DDPLLKKCIDPMDALAR 320
++ LL + Q L R +++ E+ L + P L IDP +ALA+
Sbjct: 168 KRGELRTGGELLSLQAQALRDRGAERLVLACTEVPVALAEVTSPHLAVSIDPAEALAQ 225
>gi|422014409|ref|ZP_16361021.1| aspartate racemase [Providencia burhodogranariea DSM 19968]
gi|414101061|gb|EKT62666.1| aspartate racemase [Providencia burhodogranariea DSM 19968]
Length = 244
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 113/255 (44%), Gaps = 21/255 (8%)
Query: 86 GIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
G++GG+ +TL+ L K++ + AK +E P V N P + + A + S +L
Sbjct: 8 GVLGGMGPLATLDLLQKIIEITPAKRDQEHLPVVTWNVPQIPDRQ-KAYAGTGDSPLPEL 66
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
H A+ Q L + I +PC+ H W+ +++ LH+ + + +
Sbjct: 67 LH---AIEQ--------LNKLNVSYIAIPCNTVHYWYPQLAQASKASILHIVDIATEYIA 115
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALN 264
+ +P ++G++AT TL G YQ++L G E ++ + + + IP A+
Sbjct: 116 SLQPRP------KKVGIIATKVTLDTGMYQQRLAKLGIEAIILSEHELNELFIPGCYAVK 169
Query: 265 HRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK-DDPLLKKCIDPMDALARSTV 323
+ L + L+ R +I+G E+ L D PLL IDP ALA V
Sbjct: 170 RGENVLGGELFQELATALIDRGAEKLILGCTEIPVALKTIDSPLLSLSIDPAYALAEHCV 229
Query: 324 T-WARSNKKLTLLLD 337
W ++ L++D
Sbjct: 230 KLWQQAQGTEQLVID 244
>gi|420246718|ref|ZP_14750151.1| aspartate racemase [Burkholderia sp. BT03]
gi|398073628|gb|EJL64797.1| aspartate racemase [Burkholderia sp. BT03]
Length = 497
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 123/259 (47%), Gaps = 37/259 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
+G++GGV ++T++F+ K+V + A+D + +V +P + +
Sbjct: 227 LGVVGGVGPAATVDFMHKVVRNTPAARDQDHIK-VIVEQNPQIPD--------------- 270
Query: 143 QLDHIRGAVSQ---NLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+ DH+ G + L LE GA I +PC+ +HA+ G + +P +++
Sbjct: 271 RTDHLTGDGADPTLALYATCKKLEDGGADLIAIPCNTAHAFIGPIEARLRVPIINMMNVT 330
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
A L+ A ++ RIG+LATD T+++G Y+ L+ +G VLP A V+
Sbjct: 331 ADYLRTA-FPAVD-----RIGLLATDGTIASGVYRTALEARGMTQVLPPLAMQARVMNAI 384
Query: 260 IEALNHR----DMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK----- 310
A + + E A +++ ++ LL++ V +++ E+ + P+ + +K
Sbjct: 385 YGARGVKAGFTNGECADDII-AAVESLLLQQVEVILLACTELPLLFPQAATVTRKGRSAH 443
Query: 311 CIDPMDALARSTVTWARSN 329
+DP D LAR V +AR
Sbjct: 444 LVDPTDVLARCCVEFARGT 462
>gi|452121774|ref|YP_007472022.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|451910778|gb|AGF82584.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 234
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 11/169 (6%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIG 220
LE AGA CIV+PC+ +H W D+ +V + + +A L + S +G
Sbjct: 60 MLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARMISILDATLGDIPP-SARHVG 110
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQ 280
+LAT+ATL+ G YQ+K +G ++ P+ A + +++ I L D A+ LL I
Sbjct: 111 LLATNATLATGLYQKKALARGLTLIQPEDAG-QALVMQAIYTLKRGDKTAAQALLLPQID 169
Query: 281 LLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALARSTVTWARS 328
L+ R A+I+G E+ ++ + + ID +L R+ + W S
Sbjct: 170 SLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRAAIRWYES 218
>gi|213029645|ref|ZP_03344092.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 199
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 11/169 (6%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIG 220
LE AGA CIV+PC+ +H W D+ +V + + +A L + S +G
Sbjct: 25 MLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARMISILDATLGDIPP-SARHVG 75
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQ 280
+LAT+ATL+ G YQ+K +G ++ P+ A + +++ I L D A+ LL I
Sbjct: 76 LLATNATLATGLYQKKALARGLTLIQPEDAG-QALVMQAIYTLKRGDKTAAQALLLPQID 134
Query: 281 LLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALARSTVTWARS 328
L+ R A+I+G E+ ++ + + ID +L R+ + W S
Sbjct: 135 SLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRAAIRWYES 183
>gi|409096862|ref|ZP_11216886.1| aspartate racemase [Thermococcus zilligii AN1]
Length = 235
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 82 ANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
IGI+GG+ +T + ++V + AK ++ P ++ N+P + + H
Sbjct: 3 GRVIGILGGMGPLATADLFRRIVEKTPAKRDQDHPRIIIYNNPKIPDRTAFILGHG---- 58
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
D R + + R LE GA IVMPC+ +H + + SIP + + E A
Sbjct: 59 ----DDPRPELIASARK----LESWGADFIVMPCNTAHFFAETIQRAISIPLVSMVEETA 110
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
K ++E L+ ++G++ATD T+ Y L G ++ +P+K E V+
Sbjct: 111 KVVREMGLR--------KVGLIATDGTIKGLIYHRALLEHGVQIAVPNKTNQEKVMRGIY 162
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALAR 320
E + ++E R LL + L R+ + +I G E L +D L IDPMD +A
Sbjct: 163 EGVKAGNLELGRRLLLEVAKRLEKRS-DGIIAGCTEASVALKPED-LSAPLIDPMDIIAE 220
Query: 321 STVTWARSNKKL 332
V A ++L
Sbjct: 221 KAVKLALGEEEL 232
>gi|390452632|ref|ZP_10238160.1| aspartate racemase [Paenibacillus peoriae KCTC 3763]
Length = 230
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 30/247 (12%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
T+GI+GG+ +T++ + K++ + A++ ++ +V N P + +
Sbjct: 4 TVGIMGGMGPLATVDLMNKIIRLTPAQNDQDHIHMIVDNYPQIPDRTLA----------- 52
Query: 143 QLDHIRGAVSQNL---RHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
I G + L + LE AGA IV+ C+ +H + ++ E P +++ +
Sbjct: 53 ----IMGKGNDPLPFMKQSAKRLEDAGADLIVIACNTAHYYLQNIQETVRTPIVNMPKET 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
A + EA ++ R+ +LATD TL YQ L+ +G V+ PD+ T + +++
Sbjct: 109 ASFIGEAGIR--------RVSLLATDGTLKTLLYQNALREKGITVLEPDEIT-QAIVMEG 159
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALA 319
I ++ +E + LL Q ++ + AV+ E+ VL + D + K IDP LA
Sbjct: 160 IYSVKAGHIEKGKRLLVNACQTMIAKGTKAVVAACTEIPIVLSEVDGI--KVIDPTYILA 217
Query: 320 RSTVTWA 326
+ V A
Sbjct: 218 KKVVDIA 224
>gi|50120467|ref|YP_049634.1| aspartate racemase [Pectobacterium atrosepticum SCRI1043]
gi|49610993|emb|CAG74438.1| putative aspartate racemase [Pectobacterium atrosepticum SCRI1043]
Length = 238
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 114/243 (46%), Gaps = 20/243 (8%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IG++GG+ +T++ L K+V + A +E P +V N P + + A + +S
Sbjct: 6 IGVLGGMGPLATVDLLHKIVEETPASRDQEHVPVIVWNVPQIPDRQ-QALAGTGESPLPT 64
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L H AV Q L + IV+PC+ +H W +SE P +H+ + +
Sbjct: 65 LLH---AVQQ--------LNRLSVSHIVVPCNTAHHWFDALSETSHAPLVHIADATLHAI 113
Query: 204 KEAKLKPLEAGS-GVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPTIE 261
+ P+E +IG++AT TL+AG+YQ++ Q G E V+PD+ M + +P
Sbjct: 114 TQ----PVETKKIPQKIGLIATHGTLNAGWYQQRFAAQLGVETVVPDEQEMTTLFVPGCY 169
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC-IDPMDALAR 320
A+ +++ LL L+ R +++ E+ L + IDP ALA+
Sbjct: 170 AVKRGELQHGGRLLEQLAARLVERGAERLVLACTEVPPALEAVSSRWRDISIDPTRALAQ 229
Query: 321 STV 323
+ V
Sbjct: 230 ACV 232
>gi|57640439|ref|YP_182917.1| aspartate racemase [Thermococcus kodakarensis KOD1]
gi|57158763|dbj|BAD84693.1| aspartate racemase [Thermococcus kodakarensis KOD1]
Length = 232
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 111/244 (45%), Gaps = 23/244 (9%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
IGI+GG+ +T + ++V + A+ ++ P ++ N+P + + + L +
Sbjct: 5 VIGILGGMGPLATADLFRRIVERTPARRDQDHPRIIIYNNPKIPDR----TAFILGNGPD 60
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
+ + + LE GA I+MPC+ +H + + +IP + + E AK+
Sbjct: 61 PRPELIASAKK--------LESWGADFIIMPCNTAHFFAETIQRAINIPLVSMIEETAKK 112
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
++ L+ ++G+LATD T+ Y L +G + +P+K V+ E
Sbjct: 113 IESMGLR--------KVGLLATDGTIKGMVYHRALLKRGIHIAVPNKKDQGLVMKAIYEG 164
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARST 322
+ ++E R LL + + L R +I G E+ VL +D L IDPMD +A
Sbjct: 165 VKAGNLELGRELL-LKVAKKLERRSEGIIAGCTEVSVVLKSED-LNVPLIDPMDVIAERA 222
Query: 323 VTWA 326
V A
Sbjct: 223 VKLA 226
>gi|452125246|ref|ZP_21937830.1| aspartate racemase [Bordetella holmesii F627]
gi|451924476|gb|EMD74617.1| aspartate racemase [Bordetella holmesii F627]
Length = 233
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 75/141 (53%), Gaps = 6/141 (4%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L AGA+ I +PC+ +H W+ +++ LH+ E VA++LK + + R+G+
Sbjct: 61 LNNAGAKLIAVPCNTAHLWYEQMAQASECEVLHIIEAVAQDLKRQGI------TRGRVGL 114
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQL 281
+ T ATL G YQ+ L+ G+ ++P + ++ + + +I A+ +E + I+
Sbjct: 115 MGTAATLGLGLYQQTLEKHGYTCIVPTEEEIDTLCMASIRAVKGNQVEESFAPAAECIER 174
Query: 282 LLVRAVNAVIIGSDEMQGVLP 302
L R +AV++G E+ +P
Sbjct: 175 LRTRGADAVVLGCTELPLAVP 195
>gi|291326871|ref|ZP_06126146.2| putative aspartate racemase [Providencia rettgeri DSM 1131]
gi|291312313|gb|EFE52766.1| putative aspartate racemase [Providencia rettgeri DSM 1131]
Length = 155
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 21/153 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAE-ECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IG++GG+ ++T++ K V Y+ + + E P ++ + P + + H +
Sbjct: 23 IGVLGGMGPAATVDLFNKFVNYTVVNRDQEHIPLIISSIPDIPDRTDALLNHGESPLPLM 82
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
D++R LE AGA CIV+PC+ +H W ++ E C + L + E KE+
Sbjct: 83 TDYLRK------------LENAGAECIVIPCNTAHFWFSELKEVCHVDMLSIVETTMKEV 130
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEK 236
K K IG+LAT+AT+ G YQ+K
Sbjct: 131 LVTKKK--------NIGLLATNATMYMGLYQKK 155
>gi|378764482|ref|YP_005193098.1| hypothetical protein SFHH103_06500 [Sinorhizobium fredii HH103]
gi|365184110|emb|CCF00959.1| hypothetical protein SFHH103_06500 [Sinorhizobium fredii HH103]
Length = 265
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 21/263 (7%)
Query: 73 KSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFH 131
K D + IGI+GG+ ++T++F+ K++ Y+ A ++ P +V + P + +
Sbjct: 21 KQKDHQVRHKRLIGILGGMGPTATVDFMSKVISYTPAAVDQDHIPLIVHDVPQIPDRSSA 80
Query: 132 ASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
V L +R L+ AG I +PC+ +H WH +S GC
Sbjct: 81 IEVGRDDPFLPMLSGVR------------LLDAAGVEFIAIPCNTAHYWHERLSRGCRAK 128
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ E V +L E KP I V+AT T+SA Y ++L ++PD+ T
Sbjct: 129 ILHISEAVVDQLLELPGKPRS------IAVMATRGTISADIYGDQLLTAVDRRLIPDEET 182
Query: 252 MEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC 311
+ +I I ++ AR L+ + +++ E+ + +
Sbjct: 183 -QRLIDQVIASVKGGKRVPAREAAAAAADRLVEQGAECLLLACTELPVAFAGLE-VGTTV 240
Query: 312 IDPMDALARSTVTWARSNKKLTL 334
+D DALAR+ V + + ++ +
Sbjct: 241 LDATDALARACVKASLGDSQMAM 263
>gi|50083589|ref|YP_045099.1| aspartate racemase [Acinetobacter sp. ADP1]
gi|49529565|emb|CAG67277.1| putative aspartate racemase [Acinetobacter sp. ADP1]
Length = 236
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 117/254 (46%), Gaps = 29/254 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSA--KDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
IGI+GG+ +T++ + K++ ++ D E P +V S+ + +T
Sbjct: 5 IGILGGMGPQATVDAMNKIIKNTSAHSDQEHIPVIIV-------------SIPDIPDRTK 51
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
+ + + +R LE A CI++PC+ +H W + + + +
Sbjct: 52 SIINHDDKPFEKMREYLKILENANVGCIIIPCNTAHFWFDQLQQQTHTKMISI------- 104
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
EA ++ ++ + I +LAT AT++ YQ++L N + LP+ ++ +++ +I +
Sbjct: 105 -IEATVRFIQKSNAQEICILATSATINTELYQKELANHQIKFTLPE-LEIQQLVMQSIYS 162
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK---CIDPMDALA 319
++E A+N++ I L ++ E+ +L +D +++K ID D L
Sbjct: 163 YKSGNIEEAKNIMINIINLYEYNPARKFLLACTEIPLIL--EDWIIEKPELFIDATDVLI 220
Query: 320 RSTVTWARSNKKLT 333
R+ + W ++ + T
Sbjct: 221 RNAIEWYQNGQPET 234
>gi|338708058|ref|YP_004662259.1| aspartate racemase [Zymomonas mobilis subsp. pomaceae ATCC 29192]
gi|336294862|gb|AEI37969.1| aspartate racemase [Zymomonas mobilis subsp. pomaceae ATCC 29192]
Length = 242
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 24/243 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSK-TV 142
G++GG+ +TL+ L K++ + A ++ P V N P + + +L K
Sbjct: 7 FGVLGGMGPLATLDLLQKIIAATPANRDQDHLPVVSWNVPQIADR-----QKALAGKGDS 61
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH-VGECVAK 201
L + + + L Q IV+PC+ +H W+ ++E P LH V E VA+
Sbjct: 62 PLPQLLNGIKK--------LNQLEVSHIVIPCNTAHHWYDSLAEASQAPILHIVDETVAQ 113
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
L L +IG++AT TL+AG+YQ+K++ EV+ P + M+ + +
Sbjct: 114 IL-------LTYPYPQKIGLIATHGTLAAGWYQQKIRAADIEVIFPTEEEMDKLFVAGCY 166
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL-PKDDPLLKKCIDPMDALAR 320
A+ +M A +LL LL+ R +++ E+ L L+ IDP + LA+
Sbjct: 167 AVKQGEMALAGDLLEKLAALLVKRGAEKLLLACTEVPLALAAHHSSFLEISIDPTEMLAK 226
Query: 321 STV 323
+ V
Sbjct: 227 ACV 229
>gi|310778942|ref|YP_003967275.1| aspartate racemase [Ilyobacter polytropus DSM 2926]
gi|309748265|gb|ADO82927.1| aspartate racemase [Ilyobacter polytropus DSM 2926]
Length = 233
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 125/258 (48%), Gaps = 43/258 (16%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
T+GI+GG+ +T + K+V + AKD + ++ N P + +
Sbjct: 3 TVGILGGMGPLATSDLFNKIVTLTDAKDDNDHIHIILNNYPIIPD--------------- 47
Query: 143 QLDHIRGAVSQNLRHKRAFLEQA------GARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
+ ++I G +++ LE A G+ I+MPC+ +H ++ +++E +IPF+++
Sbjct: 48 RTNYILGNGENPVKY---MLEAALKLQVMGSDVIIMPCNTAHYFYKELTEHLTIPFINMI 104
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
E AKE+KE + P +I + +T T A Y + +N G E++ P+K+ ++ V+
Sbjct: 105 EETAKEIKE--IDP----ETKKIFLFSTQGTYKAKIYDKVFENYGLEILRPEKS-VQSVV 157
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNA--VIIGSDEMQGVLPKDDPLL---KKC 311
I ++ D +N+ + I + ++ +I+G E LP +L K C
Sbjct: 158 TDIIYSIKKGDT-ALKNIDK-NILTSYIESIEGKNIILGCTE----LPVAFDILGIKKNC 211
Query: 312 IDPMDALARSTVTWARSN 329
IDP LA+S + +A N
Sbjct: 212 IDPTKILAKSAIRFAGKN 229
>gi|445127964|ref|ZP_21379956.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444855616|gb|ELX80661.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
Length = 234
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIG 220
LE AGA CIV+PC+ +H W D+ +V + + +A L + S +G
Sbjct: 60 MLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARMISILDATLGDIPP-SARHVG 110
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQ 280
+LAT+ATL+ G YQ+K +G ++ P++A + +++ I L D A+ LL I
Sbjct: 111 LLATNATLATGLYQKKALARGLTLIQPEEAG-QALVMQAIYTLKRGDKTVAQALLLPQID 169
Query: 281 LLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALARSTVTWARS 328
L+ R A+I+G E+ ++ + + ID +L R+ + W S
Sbjct: 170 SLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRAAIRWYES 218
>gi|378958045|ref|YP_005215532.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|357208656|gb|AET56702.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
Length = 234
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIG 220
LE AGA CIV+PC+ +H W D+ +V + + +A L + S +G
Sbjct: 60 MLEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARMISILDATLGDIPP-SARHVG 110
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQ 280
+LAT+ATL+ G YQ+K +G ++ P++A + +++ I L D A+ LL I
Sbjct: 111 LLATNATLATGLYQKKALARGLTLIQPEEAG-QALVMQAIYTLKRGDKTVAQALLLPQID 169
Query: 281 LLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALARSTVTWARS 328
L+ R A+I+G E+ ++ + + ID +L R+ + W S
Sbjct: 170 SLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRAAIRWYES 218
>gi|240103398|ref|YP_002959707.1| aspartate racemase [Thermococcus gammatolerans EJ3]
gi|239910952|gb|ACS33843.1| Aspartate racemase (racD) [Thermococcus gammatolerans EJ3]
Length = 234
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 25/246 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
TIGI+GG+ +T ++V + AK ++ P ++ N+P + + +
Sbjct: 3 RTIGILGGMGPLATAELFRRIVEKTPAKRDQDHPRIIIYNNPKIPDRTAFILGRGPDPRP 62
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+D + LE GA I+MPC+ +H + + IP + + E A+
Sbjct: 63 ELIDSAKK------------LESWGADFIIMPCNTAHFFADTIQRAIRIPLVSMIEETAE 110
Query: 202 ELKEAKLKPLEAGSGVR-IGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+K G G+R G+LATD T+ Y L +G + +P K V+
Sbjct: 111 RVK---------GMGLRKAGLLATDGTIKGLIYHRALLKRGVSIAVPGKKDQRLVMKAIY 161
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALAR 320
E + ++E R LL + + L R + +I G E+ L +D L IDP+D +A
Sbjct: 162 EGIKAGNLELGRELL-LKVAGKLQRRSDVIIAGCTEVSVALKPED-LSVPLIDPLDVIAE 219
Query: 321 STVTWA 326
V A
Sbjct: 220 KAVKLA 225
>gi|227114857|ref|ZP_03828513.1| putative aspartate racemase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 238
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 118/246 (47%), Gaps = 26/246 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IG++GG+ +T++ L K++ + A ++ P V N P + + A + +S
Sbjct: 6 IGVLGGMGPLATVDLLHKIIEETPASRDQDHVPVVAWNVPQIPDRQ-QALAGTGESPLPM 64
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L H AV Q L + IV+PC+ +H W ++E P +H+ + +
Sbjct: 65 LLH---AVRQ--------LNRLSVSHIVVPCNTAHHWFDALAEESHAPLVHIADATLYAI 113
Query: 204 K---EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPT 259
K EAK P +IG++AT TL+AG+YQ++ Q G E V+PD+ M + +P
Sbjct: 114 KPPAEAKKAPQ------KIGLIATHGTLNAGWYQQRFAAQLGAETVVPDEQEMTTLFVPG 167
Query: 260 IEALNHRDME-GARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC-IDPMDA 317
A+ +++ G R L ++ Q L+ R +++ E+ L + IDP A
Sbjct: 168 CYAVKRGELQHGGRLLDQLAAQ-LVARGAERLVLACTEVPPALETVSSRWRGISIDPTRA 226
Query: 318 LARSTV 323
LA++ V
Sbjct: 227 LAQACV 232
>gi|406706495|ref|YP_006756848.1| aspartate racemase [alpha proteobacterium HIMB5]
gi|406652271|gb|AFS47671.1| aspartate racemase [alpha proteobacterium HIMB5]
Length = 248
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 104/230 (45%), Gaps = 36/230 (15%)
Query: 85 IGIIGGVSVSSTLNFLGKL-VWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IGI+GG+ + L+F KL Y K ++ P F + N ++ +
Sbjct: 2 IGILGGMGTQAGLDFCNKLATQYRGKIDQDYPLFFLYNK------------SNIPGRPES 49
Query: 144 LDHIRGAVS---QNLRHKRAF-------------LEQAGARCIVMPCHISHAWHGDVSEG 187
+ GA+S +N+ KR + LE+A R IV+PC+ +H W+ D+ +
Sbjct: 50 IGKTTGALSNRFENISSKRKYEKVLKSLIDGCKKLEKAKCRFIVIPCNTAHYWYDDLQKK 109
Query: 188 CSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
IP +++ + V K+ +IG+LAT+ TL Y +K+ ++ +E+ P
Sbjct: 110 IGIPIINMPKEVFNHTKKT------CKKNSKIGLLATEGTLKTKVY-DKIFSKDYELCFP 162
Query: 248 DKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
+ + I+ + +++ A +++ I+ L+ +I+G E+
Sbjct: 163 TNKLQKQSVNKAIKEVKMGNVKKAAKVIQSSIKYLIKNKCKKIILGCTEL 212
>gi|375260540|ref|YP_005019710.1| aspartate racemase [Klebsiella oxytoca KCTC 1686]
gi|397657634|ref|YP_006498336.1| Aspartate racemase [Klebsiella oxytoca E718]
gi|365910018|gb|AEX05471.1| aspartate racemase [Klebsiella oxytoca KCTC 1686]
gi|394346058|gb|AFN32179.1| Aspartate racemase [Klebsiella oxytoca E718]
Length = 239
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 21/238 (8%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GI+GG+ +TL+ + KL+ + A ++ P VV N P + + A + S Q
Sbjct: 7 LGILGGMGPLATLDLMHKLLRATPASSDQQQIPHVVWNVPQIADRQ-RALAGTGPSPLPQ 65
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L + V Q L + G I + C+ +H W+ +++ P LH+ + +
Sbjct: 66 LLY---GVEQ--------LNRVGVSHIAIACNTAHHWYEALAQHSDAPLLHIVDATLA-V 113
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ K KP R+G++AT TL AG++Q G E V P + + +P A+
Sbjct: 114 FDGKEKPR------RVGIIATQGTLDAGWFQHGFTAMGIESVQPTQEELRQWFVPGCYAV 167
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK-DDPLLKKCIDPMDALAR 320
++ LL + Q L R +++ E+ L + P L IDP +ALAR
Sbjct: 168 KRGELRTGGELLSLQAQALRDRGAERLVLACTEVPVALAEVTSPHLAVSIDPAEALAR 225
>gi|398308384|ref|ZP_10511858.1| aspartate racemase [Bacillus mojavensis RO-H-1]
Length = 235
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 116/259 (44%), Gaps = 59/259 (22%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAK------DAE-------ECP-PFVVCNDPALNEELF 130
IGI+ G+ ST FL K++ Y K D + CP PF V + P ++E+
Sbjct: 2 IGILAGMGPKSTSPFLDKVIDYCQKLYGASHDIDYPQMMIYSCPTPFYV-DRPIDHDEMK 60
Query: 131 HASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSI 190
A I GAV LE+ GA I +PC+ +H + D+ + SI
Sbjct: 61 KAI-------------IDGAVK---------LEKTGADFISLPCNTAHVYFEDIQQALSI 98
Query: 191 PFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
P LH+ E KEL + S ++ VL TDAT+ + YQ+ L+ G+E +
Sbjct: 99 PLLHIIEETMKELPD---------SAQKVAVLGTDATIQSCLYQKGLKAGGYEFIHETHW 149
Query: 251 TME-HVIIPTIEALNH--RDMEGARNL-LRIGIQL-LLVRAVNAVIIGSDEMQGVLPKDD 305
E + +I I+ NH + + R L L IG + L++ A + D + G +P
Sbjct: 150 QREVNQLIAAIKQPNHVQKTQDIWRELYLEIGKRADLIISACTDLNTVLDHVHGDIP--- 206
Query: 306 PLLKKCIDPMDALARSTVT 324
ID D LA+STV+
Sbjct: 207 -----IIDSSDCLAKSTVS 220
>gi|330819549|ref|YP_004348411.1| Aspartate racemase [Burkholderia gladioli BSR3]
gi|327371544|gb|AEA62899.1| Aspartate racemase [Burkholderia gladioli BSR3]
Length = 504
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 117/253 (46%), Gaps = 43/253 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
IG++GGV ++T++FL KLV ++ A+D + +V +P + + H V TV
Sbjct: 251 IGVVGGVGPAATVDFLRKLVHHTPAARDQDHLK-LIVEQNPQIPDRTAHL-VGEGPDPTV 308
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
L KR LEQ GA+ + +PC+ +HA+ + SIP +++ A+
Sbjct: 309 SL---------YAACKR--LEQGGAKLVAIPCNTAHAFVERIQPRLSIPIVNMLTVTARH 357
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT--- 259
L+E + E IGVLAT TL++G Y+E L +GF ++P A V+
Sbjct: 358 LRERFPEARE------IGVLATSGTLASGVYREALAAEGFVQLVPPPALQARVMAAIYGE 411
Query: 260 -------IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD---PLLK 309
++ D+E A + L+ V++G E+ +LP + P
Sbjct: 412 AGVKAGFVQGRCREDIEAA-------LDALVAAGARVVLLGCTELPLLLPAGEIAGPGGA 464
Query: 310 KC--IDPMDALAR 320
+ +DP + LAR
Sbjct: 465 RVSLVDPTEVLAR 477
>gi|374324115|ref|YP_005077244.1| aspartate racemase [Paenibacillus terrae HPL-003]
gi|357203124|gb|AET61021.1| aspartate racemase [Paenibacillus terrae HPL-003]
Length = 230
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 30/247 (12%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
T+GI+GG+ +T++ + K++ + A++ ++ +V N P + +
Sbjct: 4 TVGIMGGMGPLATVDLMNKIIRLTPAQNDQDHIHMIVDNYPQIPDRTLA----------- 52
Query: 143 QLDHIRGAVSQNL---RHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
I G + L + LE AG IV+ C+ +H + ++ E P +++ +
Sbjct: 53 ----IMGKGNDPLPFMKQSAKRLEDAGTDLIVIACNTAHYYLQNIQETVRTPIVNMPKET 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
A + EA ++ R+ +LATD TL YQ L+ +G V+ PD+ T + +++
Sbjct: 109 ASFIGEAGIR--------RVSLLATDGTLKTLLYQNALREKGITVLEPDEIT-QAIVMEG 159
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALA 319
I ++ +E + LL Q ++ + AV+ E+ VL + D + K IDP LA
Sbjct: 160 IYSVKAGHIEKGKRLLVNACQTMIAKGTKAVVAACTEIPIVLSEVDGI--KVIDPTYILA 217
Query: 320 RSTVTWA 326
+ V A
Sbjct: 218 KKVVDVA 224
>gi|297585520|ref|YP_003701300.1| aspartate racemase [Bacillus selenitireducens MLS10]
gi|297143977|gb|ADI00735.1| aspartate racemase [Bacillus selenitireducens MLS10]
Length = 232
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 24/168 (14%)
Query: 85 IGIIGGVSVSSTLNF---LGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
IG+IGG+S ST+++ + +LV P ++ ASV
Sbjct: 4 IGLIGGMSWESTVSYYEAMNRLVRTRKGGLHSLP-------------VYMASVDFAPYAH 50
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+Q + + + L + LE+AGA IV+ + HA D++ G SIPFLH+G+ AK
Sbjct: 51 MQKEGDWNGIGRQLNQEALRLEKAGAEAIVLATNTMHAVADDIASGLSIPFLHIGDVAAK 110
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK 249
++ LK +G+L T T+ FY E+L G + ++P +
Sbjct: 111 KISSQGLK--------TVGLLGTSFTMEQPFYHERLNANGIQTLIPSE 150
>gi|242398533|ref|YP_002993957.1| Aspartate racemase [Thermococcus sibiricus MM 739]
gi|242264926|gb|ACS89608.1| Aspartate racemase [Thermococcus sibiricus MM 739]
Length = 231
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 115/249 (46%), Gaps = 25/249 (10%)
Query: 80 NQANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLK 138
+ IGI+GG+ +T++ ++V + AK ++ P ++ N+ + + +
Sbjct: 3 DMEKIIGILGGMGPLATVDLFRRIVMKTPAKKDQDHPRIIIYNNSKVPDRTAYILGRGKD 62
Query: 139 SKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
LD R LE+ GA I+MPC+ +H + D+ + +IP +++ E
Sbjct: 63 PLPELLDSARK------------LEKWGADFIIMPCNTAHFFAEDIQKAINIPLINMIEE 110
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIP 258
A+ +K LK + G+LAT+ T+ Y L +G E+ +P++ + ++
Sbjct: 111 AAEHIKNLGLK--------KAGLLATEGTVKGLVYHRALLKRGIEIAVPNEKDQKALMDA 162
Query: 259 TIEALNHRDME-GARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
E + ++E G + +L + + L + + +I G E+ L ++D IDPMD
Sbjct: 163 IYEGIKAGNLEWGRQKMLEVAKK--LEKRCDGLIAGCTEVSVALRQED-FEVPFIDPMDV 219
Query: 318 LARSTVTWA 326
+A V A
Sbjct: 220 IAEKAVKLA 228
>gi|302543198|ref|ZP_07295540.1| aspartate racemase [Streptomyces hygroscopicus ATCC 53653]
gi|302460816|gb|EFL23909.1| aspartate racemase [Streptomyces himastatinicus ATCC 53653]
Length = 241
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 112/247 (45%), Gaps = 23/247 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IGI+GG+ ++T +F KLV + + ++ V+ +DP + + A + + T
Sbjct: 11 IGILGGMGPAATADFYAKLVSMTPGRSDQDHLTTVIWSDPTIPDR-TEALLGNGPDPTPW 69
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L L R L +AGA I +PC+ +HA+ +++ +P +H+ VA+ L
Sbjct: 70 L----------LNGSR-VLREAGATVIAIPCNTAHAFVPRIADHVGLPIIHMIGEVARHL 118
Query: 204 KEAKLKPLEAGSGVRI-GVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
+ VR G+LAT T+ AG YQE L G +VLPD+ ++ I A
Sbjct: 119 TTVR-------PAVRTAGLLATTGTVRAGLYQEWLDRYGIRLVLPDEDDQHREVMAAIRA 171
Query: 263 LNHRDMEGARNL-LRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARS 321
+ A L + L R A+I G E+ LP D + IDP LA +
Sbjct: 172 VKAGTGGAAVTASLARAARRLTDRGAEAIIAGCTEIPLGLPA-DAVDVPLIDPAAILAGA 230
Query: 322 TVTWARS 328
V ARS
Sbjct: 231 LVHRARS 237
>gi|424741902|ref|ZP_18170237.1| aspartate racemase [Acinetobacter baumannii WC-141]
gi|422944334|gb|EKU39330.1| aspartate racemase [Acinetobacter baumannii WC-141]
Length = 241
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 110/251 (43%), Gaps = 22/251 (8%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
T+GI+GG+ + ++F +L+ S KD E P +V N H + +
Sbjct: 9 TLGILGGMGPGAAVDFQQRLLDASPATKDQEHIPT-IVWN---------HGGI---PDRQ 55
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+ L ++ + + H LE++G I +PC+ +H WH D+ + I L++ E +
Sbjct: 56 LALKNLGESPLNAMLHGLKILERSGVSKIAIPCNTAHFWHSDLQQHTPIEILNMVEITVQ 115
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
++ LK ++G ++G+LAT LS YQ +L V +E +P +
Sbjct: 116 QI----LKNYQSGD--KVGILATKGALSTQLYQRELSKHNIPFVTNSDEEIEQEFMPAVY 169
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQ-GVLPKDDPLLKKCIDPMDALAR 320
A+ + A + + Q L+ + ++I+ E+ G+ +L D LA
Sbjct: 170 AVKRNESAKAGIVFQELSQKLIDKGAGSIILACTEIPIGLHAIQSLILNVSFDTTQILAD 229
Query: 321 STVTWARSNKK 331
+ V W N +
Sbjct: 230 ACVNWFYRNTQ 240
>gi|365922090|ref|ZP_09446327.1| aspartate racemase [Cardiobacterium valvarum F0432]
gi|364574940|gb|EHM52371.1| aspartate racemase [Cardiobacterium valvarum F0432]
Length = 228
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
T+GIIGG+ +T++ K+ ++A + +++ H + S
Sbjct: 2 KTLGIIGGMGPQATIDLYQKITDHTAA--------------SRDQDHLHILIDSYPQIPD 47
Query: 143 QLDHIRGAVSQNL----RHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
+ HI G L R R LE AGA ++MPC+ +H + + E +PFLH+ +C
Sbjct: 48 RTAHICGNGDDPLPYLVRSARR-LEAAGAELLLMPCNAAHHYIRALRERTILPFLHIADC 106
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
L + P G R+ VLAT T +G Y++ LQ G++ V PD+A
Sbjct: 107 AIAALS-TRCPP-----GSRVAVLATRGTRHSGIYRDALQQAGYQAVEPDEA 152
>gi|227327218|ref|ZP_03831242.1| putative aspartate racemase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 238
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 117/246 (47%), Gaps = 26/246 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IG++GG+ +T++ L K+V + A ++ P V N P + + A + +S
Sbjct: 6 IGVLGGMGPLATVDLLHKIVEETPASRDQDHVPVVAWNVPQIPDRQ-QALAGTGESPLPT 64
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L H A+ Q L + IV+PC+ +H W ++E P LH+ + L
Sbjct: 65 LLH---AIRQ--------LNRLSVSHIVVPCNTAHHWFDALTEASDAPLLHIADATLHAL 113
Query: 204 KE---AKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPT 259
+ AK P +IG++AT TL+AG+YQ++ Q G E V+P++ M + +P
Sbjct: 114 TQVDKAKASPR------KIGLIATHGTLNAGWYQQRFAAQLGAETVVPNEQEMTTLFVPG 167
Query: 260 IEALNHRDME-GARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK-CIDPMDA 317
A+ +++ G R L ++ Q L+ R +++ E+ L + IDP A
Sbjct: 168 CYAVKRGELQHGGRLLDQLAAQ-LVERGAERLVLACTEVPPALEAVSSRWRDISIDPTRA 226
Query: 318 LARSTV 323
LA++ V
Sbjct: 227 LAQACV 232
>gi|354598292|ref|ZP_09016309.1| aspartate racemase [Brenneria sp. EniD312]
gi|353676227|gb|EHD22260.1| aspartate racemase [Brenneria sp. EniD312]
Length = 244
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 37/255 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECP--------PFVVCNDPALNEELFHASVHS 136
IG++GG+ +T++ L K++ EE P P V N P + + A +
Sbjct: 11 IGVLGGMGPLATVDLLQKII-------EETPVSRDQDHVPVVAWNVPQIPDRQ-QALAGT 62
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
+S L + AV Q L + A IV+PC+ +H W +++ P +H+
Sbjct: 63 GESP---LPALLAAVEQ--------LNRLSASHIVIPCNTAHHWFDALAQKSEAPLIHIA 111
Query: 197 ECV---AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
+ + L + + K L +IG++AT TL AG+YQ++ G E + PD+ +
Sbjct: 112 DATLASVEYLVKNRAKVLR-----KIGLIATRGTLDAGWYQQRFAALGAETLEPDEQELA 166
Query: 254 HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK-DDPLLKKCI 312
+ +P A+ +++ LL Q L+ R +++ E+ L + L +
Sbjct: 167 TLFVPGCYAVKRGELQQGGYLLEQLAQRLIDRGAEWLVLACTEVPPALAAINSRWLDISL 226
Query: 313 DPMDALARSTV-TWA 326
DP ALAR+ V WA
Sbjct: 227 DPTRALARACVREWA 241
>gi|210635501|ref|ZP_03298582.1| hypothetical protein COLSTE_02521 [Collinsella stercoris DSM 13279]
gi|210158356|gb|EEA89327.1| aspartate racemase [Collinsella stercoris DSM 13279]
Length = 238
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 20/243 (8%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G++GGV +T F+ ++ + A+ ++ P +V NDP + +
Sbjct: 6 LGVLGGVGPLATAYFMELVIKKTPAERDQDNIPMIVFNDPQIPDR-----------TAFI 54
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
LD + + +LE AGA I +PC+ +H ++ ++ +P L++ +
Sbjct: 55 LDRTQPDPLPEMERVVLWLEDAGADYIAIPCNTAHFFYEQINAVAHVPVLNI-------M 107
Query: 204 KEAKLKPLEA-GSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
+E + +EA G IG+LATD TL++G +Q L G VV P ++P I
Sbjct: 108 RETTSRIVEAYGEHATIGLLATDGTLTSGVFQNYLSEAGLSVVAPSDEDQAKTVMPLIYD 167
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARST 322
R++ L + + +AVI+G E+ V ID MD LA
Sbjct: 168 RIKRNLPYDPAELLDLARRMHENGCDAVIVGCTELSVVYQDLAVKPTYLIDAMDVLADRC 227
Query: 323 VTW 325
V++
Sbjct: 228 VSY 230
>gi|229085488|ref|ZP_04217726.1| Aspartate racemase [Bacillus cereus Rock3-44]
gi|228697793|gb|EEL50540.1| Aspartate racemase [Bacillus cereus Rock3-44]
Length = 226
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 80/149 (53%), Gaps = 17/149 (11%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
+E +GA CI+M + H + +V + SIP LH+G+ A+E+ E +K RIG+
Sbjct: 69 VEHSGADCILMCSNTVHQFAEEVEKAISIPLLHIGDVSAEEIIEKDVK--------RIGL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPTIEA--LNHRDMEGARNLLR 276
L T T+ FY+ KL N G E ++P ++ + HVI+ + ++H+ E + L+
Sbjct: 121 LGTKQTMEQDFYKTKLTNYGIETIIPEENERNFIHHVILHELSKGIISHQSKE---HFLQ 177
Query: 277 IGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
I IQ L+ +++G E+ ++ + D
Sbjct: 178 I-IQKLIKNGAEGILLGCTEIPLLISQKD 205
>gi|403381829|ref|ZP_10923886.1| aspartate racemase [Paenibacillus sp. JC66]
Length = 231
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 24/250 (9%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSL 137
++++ T+GIIGG+ +T++ + K++ + A+ +E +V P + + A++
Sbjct: 1 MSKSRTVGIIGGMGPLATVDLMNKIIQQTPARQEQEHLHLIVDQYPQIPDRT--AAILGR 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
S V L LE AGA I + C+ +H + + E +IP LH+
Sbjct: 59 GSDPVPY----------LVESARRLESAGAELIAIACNTAHYYVRQLEETVAIPILHMPR 108
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
L++ +K + G+LATD TL + YQ+ L ++ + V+P+ A +HV +
Sbjct: 109 QTVAHLEKRGVK--------KAGLLATDGTLQSRLYQDLLASREIDAVVPEPAVQQHV-M 159
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I A+ D+E +LL L VI G E+ VL + L I+P +
Sbjct: 160 QGIYAVKIGDLEMGVSLLAEAANSLAAAGAEVVIAGCTEVPIVLSTSEQL--HIINPTEI 217
Query: 318 LARSTVTWAR 327
LA+ + AR
Sbjct: 218 LAKEVIAQAR 227
>gi|338814119|ref|ZP_08626163.1| aspartate racemase [Acetonema longum DSM 6540]
gi|337273888|gb|EGO62481.1| aspartate racemase [Acetonema longum DSM 6540]
Length = 237
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 46/254 (18%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
IGI+GG+ ++T + K++ + D + F+ CN ++ +T
Sbjct: 5 IGILGGMGAAATCDLFNKIITMTDAKSDQDHIHIFIDCN-------------TNIPDRTK 51
Query: 143 QL-----DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
+ D + V +R L+ GA +VMPC+ +H ++ ++ +P L++ +
Sbjct: 52 AILGKGEDPVPEIVRSGIR-----LQSMGANVLVMPCNTAHYFYDRITPFFDVPLLNMLQ 106
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEH 254
A+ +++ +K RIG+LATD TL +G Y L G E V+P D+A++
Sbjct: 107 LTAEAIQKRGIK--------RIGLLATDGTLQSGVYHAVLAQAGIEAVIPSLSDQASVMD 158
Query: 255 VIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQ---GVLPKDDPLLKKC 311
VI I+ N R+++ R I L R +I+G E+ + D P
Sbjct: 159 VIYNGIKGAN-RNIDLGR--FYDTIDGLFARGAEILILGCTELPIAFEIYRIDRP----A 211
Query: 312 IDPMDALARSTVTW 325
IDP LA + + +
Sbjct: 212 IDPTTVLAAAAIQF 225
>gi|390570895|ref|ZP_10251151.1| aspartate racemase [Burkholderia terrae BS001]
gi|420250776|ref|ZP_14753980.1| aspartate racemase [Burkholderia sp. BT03]
gi|389937051|gb|EIM98923.1| aspartate racemase [Burkholderia terrae BS001]
gi|398059842|gb|EJL51684.1| aspartate racemase [Burkholderia sp. BT03]
Length = 233
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 106/247 (42%), Gaps = 31/247 (12%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEE---LFHASVHSLKSK 140
IGI+GG+ +T++F+ K+V + A +E P +V N P + + + L +
Sbjct: 4 IGILGGMGPLATVDFMDKVVRLTEASRDQEHLPLLVANLPHIEDRSSAILDDGADPLPAL 63
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE-CV 199
+D L + I +PC+ +H W+ + + P L++ E CV
Sbjct: 64 LAGID---------------MLNRNSVGLIAIPCNSAHHWYAQIRAHSAAPVLNIAEICV 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
A A+ R+ VLAT L +GFYQ L + E V PD+ TM+ ++
Sbjct: 109 AAVPSTAR----------RVAVLATGGALVSGFYQRALAERDIEPVTPDE-TMQPLVADC 157
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALA 319
I+ + D++ A L + +L V ++ E+ + ID LA
Sbjct: 158 IDEVKSGDLDAAATHLETALTMLAEEGVTMALMACTEIPLAAQRIAAPPLALIDSSLELA 217
Query: 320 RSTVTWA 326
R+TV +A
Sbjct: 218 RATVKYA 224
>gi|300767167|ref|ZP_07077079.1| aspartate racemase [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308180386|ref|YP_003924514.1| aspartate racemase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|380032371|ref|YP_004889362.1| aspartate racemase [Lactobacillus plantarum WCFS1]
gi|418275047|ref|ZP_12890459.1| aspartate racemase [Lactobacillus plantarum subsp. plantarum NC8]
gi|300494986|gb|EFK30142.1| aspartate racemase [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308045877|gb|ADN98420.1| aspartate racemase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|342241614|emb|CCC78848.1| aspartate racemase [Lactobacillus plantarum WCFS1]
gi|376009518|gb|EHS82846.1| aspartate racemase [Lactobacillus plantarum subsp. plantarum NC8]
Length = 248
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 27/259 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKL--VWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
N GIIGG+ +T +F+ + + + +D ++ +V+ ND + + +
Sbjct: 3 NCFGIIGGMGTMATEDFVHTVNRLTVTHRD-QDYLNYVILNDAEIPDRTAYI-------- 53
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV-GECV 199
LDH +L L Q G IVM C+ +H + ++ ++P L++ V
Sbjct: 54 ---LDHNCANPLPSLEADVQLLNQLGVMFIVMTCNTAHYFIPALTALSNVPILNMPALAV 110
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+ + +PL RIG+LAT TL + YQ+ +++ G V+P+K V+
Sbjct: 111 TAACRSQQPRPL------RIGILATTGTLESQLYQQLIRSNGHIPVIPNKQQQAQVMTLI 164
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM---QGVLPKDDPLLKKCIDPMD 316
+ + RD + QLL +AVI+G E+ Q P D ++ ID
Sbjct: 165 YDDIKQRDFVDRVKFHGLIDQLLNAADCDAVILGCTELSVAQDAAPYDS---ERIIDAQY 221
Query: 317 ALARSTVTWARSNKKLTLL 335
LAR+TV A++ K +L
Sbjct: 222 ELARATVQRAQATKPALIL 240
>gi|296129577|ref|YP_003636827.1| aspartate racemase [Cellulomonas flavigena DSM 20109]
gi|296021392|gb|ADG74628.1| aspartate racemase [Cellulomonas flavigena DSM 20109]
Length = 244
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 119/251 (47%), Gaps = 35/251 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
+G+IGGV ++T+ FL +V ++A + ++ +V L HA++ +
Sbjct: 15 VGVIGGVGPAATVCFLDLVVRHTAAERDQDHVDLVV--------LQHATIPDRTA----- 61
Query: 145 DHIRGAVSQN----LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
+I G ++ + LE+ G +V+PC+ +H + +V+ +P L + V
Sbjct: 62 -YILGTSGEDPGPVMAADARRLERLGVGFVVVPCNTAHHFTDEVAAAVDVPVLSI---VD 117
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME---HVII 257
+ + E +P A R+GVLAT TL+A YQ ++ +G E V+PD A + +I
Sbjct: 118 ETVDEVAARPGVA----RVGVLATSGTLAARVYQRAIEARGLEAVVPDDADQDVVMGIIY 173
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK--KCIDPM 315
++A D+ L L R + V++G E+ V+ + LL + +D +
Sbjct: 174 DQVKAGRPADVAA----LHAVADRLRERGADVVVLGCTELS-VVAAEHRLLDDARYVDSL 228
Query: 316 DALARSTVTWA 326
D LAR TV A
Sbjct: 229 DVLARRTVERA 239
>gi|387770057|ref|ZP_10126248.1| aspartate racemase [Pasteurella bettyae CCUG 2042]
gi|386905404|gb|EIJ70172.1| aspartate racemase [Pasteurella bettyae CCUG 2042]
Length = 230
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 106/248 (42%), Gaps = 29/248 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAK--DAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
IGI+GG+ ++T++ K + + D E P L +S+ + +T
Sbjct: 6 IGILGGMGPAATMDMFQKFIQLTPATCDQEHIP-------------LLISSIPDIPDRTT 52
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
+ H L + LE AGA CI++ C+ +H W ++ + ++ + + E A
Sbjct: 53 CILHNGANPGPILIEQAKRLESAGANCIIIACNTAHNWFDEIHKQVNVEMISMIESTADA 112
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
K RIG+LATDATL G Y++K++ + + PD + V + +I
Sbjct: 113 AVSTGKK--------RIGILATDATLETGLYKKKIEEFNLDYIAPDPDSQTQV-MHSIYL 163
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD---DPLLKKCIDPMDALA 319
+ + ++ L+ + +I+G E+ +L D P L +D L
Sbjct: 164 YKAGKIAESTEIMMKQKDALIKKGAEIIILGCTEVPMILMTDINISPELY--VDSTLCLV 221
Query: 320 RSTVTWAR 327
+S + W R
Sbjct: 222 KSAINWYR 229
>gi|302542803|ref|ZP_07295145.1| aspartate racemase [Streptomyces hygroscopicus ATCC 53653]
gi|302460421|gb|EFL23514.1| aspartate racemase [Streptomyces himastatinicus ATCC 53653]
Length = 257
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 25/207 (12%)
Query: 80 NQANTIGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCNDPALNEELFHASVHSL 137
+A +GI+GG+ ++T +F KL+ + A+D + P V+ DP + +
Sbjct: 14 GRALKVGILGGMGPAATADFYAKLIRATPAARDQDHVP-VVIWADPTIPDR--------- 63
Query: 138 KSKTVQLDHIRGA-VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDV-SEGCSIPFLHV 195
LDH GA S L+ ++ AGA I +PC+ +HA+ G V S +P L +
Sbjct: 64 --TAALLDH--GADPSPWLKRGAHYVALAGANLIAVPCNTAHAFLGAVRSAAAPVPVLDM 119
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
A+E+ A+ +P G +G+LAT TL+A YQ L G + ++PD + V
Sbjct: 120 VAETAEEV--ARSQP-----GATVGILATTGTLTAELYQNALSRCGLKPLIPDSTAQQAV 172
Query: 256 IIPTIEALNHRDMEGARNLLRIGIQLL 282
+ + D+ AR L+ ++ L
Sbjct: 173 MSAIRQVKAGGDLAHARRLMSPALRSL 199
>gi|392954342|ref|ZP_10319894.1| aspartate racemase [Hydrocarboniphaga effusa AP103]
gi|391858241|gb|EIT68771.1| aspartate racemase [Hydrocarboniphaga effusa AP103]
Length = 263
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 116/246 (47%), Gaps = 19/246 (7%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAE-ECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G++GG+ ++T++F+ K++ + D + E P +VC+ + + + + L +
Sbjct: 2 LGVLGGMGPAATVDFMEKVIDCTGADTDQENIPMIVCSASNIPDR----TAYILGNGPDP 57
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L + AV + LE AGA I +PC+ +H WH + S+P LH+ E V L
Sbjct: 58 LPDMIVAVRR--------LEVAGATRIAIPCNTAHYWHAALQAVTSLPILHIVEVVCDVL 109
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ +P G IG+LAT TL+AG Y + L +GF + P + +H ++ I +
Sbjct: 110 ER---EPNAKARG-PIGILATHGTLAAGIYSQHLAERGFSSLQP-QGDDQHEVMRAIGLV 164
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALARST 322
A L Q L R + V++ E+ L + + + +D D LA++
Sbjct: 165 KAGCTAEAIEPLMRQAQKLWDRGCSVVVMACTEIPIALAHRPEVAQGRLLDATDELAKAC 224
Query: 323 VTWARS 328
V +S
Sbjct: 225 VAIYKS 230
>gi|421664801|ref|ZP_16104937.1| aspartate racemase [Acinetobacter baumannii OIFC110]
gi|408711972|gb|EKL57164.1| aspartate racemase [Acinetobacter baumannii OIFC110]
Length = 226
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 7/179 (3%)
Query: 155 LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAG 214
+ H LE++G I +PC+ +H WH D+ + I L++ E +++ LK ++G
Sbjct: 54 MLHGLKILERSGVSKIAIPCNTAHFWHSDLQQHTHIQILNMVEITVQQI----LKNYQSG 109
Query: 215 SGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNL 274
++G+LAT LS YQ +L ++ +E +P + A+ + A +
Sbjct: 110 D--KVGILATKGALSTQLYQIELSKHSIPFIINSDEEIEQEFMPAVYAVKRNETAKAGIV 167
Query: 275 LRIGIQLLLVRAVNAVIIGSDEMQ-GVLPKDDPLLKKCIDPMDALARSTVTWARSNKKL 332
+ Q L+ + ++I+ E+ G+ P+L D LA + V W N +L
Sbjct: 168 FQELSQRLIDKGAGSIILACTEIPIGLHAIQSPILDVSFDTTQILADACVNWFYRNTQL 226
>gi|377807839|ref|YP_004979031.1| aspartate racemase [Burkholderia sp. YI23]
gi|357939036|gb|AET92593.1| aspartate racemase [Burkholderia sp. YI23]
Length = 489
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 102/235 (43%), Gaps = 35/235 (14%)
Query: 123 PALNEELFHASVHSLKSKTVQLDHIRGAVSQN--------------------LRHKRAFL 162
PA + H V + ++ Q DHI+ V QN L L
Sbjct: 256 PAATVDFIHKIVRATPARRDQ-DHIKLMVEQNPQIPDRTENLVGNGPDPTISLYATCKKL 314
Query: 163 EQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVL 222
E GA I +PC+ +HA+ + ++P +++ + L+E L A +GVL
Sbjct: 315 EAGGADIIAIPCNTAHAFVERIQPYLAVPIVNMLTVTVRYLRET-FPALRA-----VGVL 368
Query: 223 ATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI--IPTIEALNHRDMEGA-RNLLRIGI 279
AT T+++G Y+ L++QG ++P A V+ I E + GA + + I
Sbjct: 369 ATTGTVASGVYERALESQGLRQIVPGPALQARVMAAIYGKEGVKAGFTTGACQEDIAAAI 428
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDD-----PLLKKCIDPMDALARSTVTWARSN 329
+ L+ V +I+G E+ + P+ D + +DP D LAR VT+A +
Sbjct: 429 EGLIAEGVEVIILGCTELPLLFPRTDFTGAGGARVRLVDPTDVLARQCVTYASAT 483
Score = 37.7 bits (86), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 91/241 (37%), Gaps = 27/241 (11%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHS 136
L G++GG+ ++ + KL+ +A D E D + F +S
Sbjct: 6 LTSVRKFGVVGGLGPLASADVFFKLIKSMPTASDGEHF-------DAIFEQHPFRSSDAG 58
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
+ T + +I ++ E+ G +V+PC +SH + ++ + + +
Sbjct: 59 RDTLTQRKLYIFNMMNS--------FEKRGVTTVVLPCFLSHTFIDELKANSPLQIVDMV 110
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
E V ++ K + RIGVLA+ G ++ F+V+ P A ++
Sbjct: 111 EAVRSHVRR-KFPAVR-----RIGVLASAYARRKGLFETYFAAPEFDVIHPRLAEGRDLV 164
Query: 257 IPTIEALNHRDMEGARN----LLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCI 312
+ N R LLR + L+ + N ++ G E+ V PL +
Sbjct: 165 NEAVYGPNGVKSGNLRGRPVELLREACEDLIAQGANVIVPGLTEIALVAEDIGPLRVPLV 224
Query: 313 D 313
D
Sbjct: 225 D 225
>gi|213864776|ref|ZP_03386895.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
Length = 172
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
Query: 165 AGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLAT 224
AGA CIV+PC+ +H W D+ +V + + +A L + S +G+LAT
Sbjct: 2 AGAECIVIPCNTAHYWFDDLQ--------NVAKARMISILDATLGDIPP-SARHVGLLAT 52
Query: 225 DATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLV 284
+ATL+ G YQ+K +G ++ P+ A + +++ I L D A+ LL I L+
Sbjct: 53 NATLATGLYQKKALARGLTLIQPEDAG-QALVMQAIYTLKRGDKTAAQALLLPQIDSLIA 111
Query: 285 RAVNAVIIGSDEMQGVLPKDDPLLK-KCIDPMDALARSTVTWARS 328
R A+I+G E+ ++ + + ID +L R+ + W S
Sbjct: 112 RGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRAAIRWYES 156
>gi|255632384|gb|ACU16542.1| unknown [Glycine max]
Length = 58
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 172 MPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAG 214
MPCH+SHAWH ++SE S+PFLH G+CVA ELK A LKP+ A
Sbjct: 1 MPCHLSHAWHSEISEDSSLPFLHDGDCVAMELKNAMLKPIHAA 43
>gi|251797250|ref|YP_003011981.1| aspartate racemase [Paenibacillus sp. JDR-2]
gi|247544876|gb|ACT01895.1| aspartate racemase [Paenibacillus sp. JDR-2]
Length = 240
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 116/249 (46%), Gaps = 19/249 (7%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
++G+IGG+ +T F +++ + D ++ +V LN L+ K +
Sbjct: 5 SLGVIGGMGPKATSVFFERIINKTNADTDQNHINIV----ILNHTSLPDRTDVLRKK--E 58
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
D +S+++ A L AG I +PC+ +H ++ ++ E +IP +++ V + L
Sbjct: 59 GDLFLDKISKDM----ALLHDAGVSNIAIPCNTAHCFYNEMQEMTTIPIINM---VNETL 111
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
K L + GSG ++G+LATD TL G Y E+ +N ++ P++ + ++ + L
Sbjct: 112 K---LVADKFGSGSKVGILATDGTLHNGIYSEECENLKLKLYKPNEEIQKRIMSIIYKKL 168
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTV 323
+ I +LL + +I E+ + P + + CID +D L ++
Sbjct: 169 KKNQHVNPAEIEEIIEKLLSDFGCDCAVIACTELSSI-PLRKNIKRYCIDALDVLVEQSI 227
Query: 324 TWARSNKKL 332
RS K++
Sbjct: 228 --LRSGKRV 234
>gi|448821053|ref|YP_007414215.1| Aspartate racemase [Lactobacillus plantarum ZJ316]
gi|448274550|gb|AGE39069.1| Aspartate racemase [Lactobacillus plantarum ZJ316]
Length = 248
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 27/259 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKL--VWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
N GIIGG+ +T +F+ + + + +D ++ +V+ ND + + +
Sbjct: 3 NCFGIIGGMGTMATEDFVHTVNRLTVTHRD-QDYLNYVILNDAEIPDRTAYI-------- 53
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV-GECV 199
LDH +L L Q G IVM C+ +H + ++ ++P L++ V
Sbjct: 54 ---LDHNCANPLPSLEADVQLLNQLGVMFIVMTCNTAHYFIPALTALSNVPILNMPALAV 110
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+ + +PL RIG+LAT TL + YQ+ +++ G V+P+K V+
Sbjct: 111 TAACRSQQPRPL------RIGILATTGTLESQLYQQLIRSNGHIPVIPNKQQQAQVMTLI 164
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM---QGVLPKDDPLLKKCIDPMD 316
+ + RD + QLL AVI+G E+ Q P D ++ ID
Sbjct: 165 YDDIKQRDFVDRVKFHGLIDQLLNAADCGAVILGCTELSVAQDAAPYDS---ERIIDAQY 221
Query: 317 ALARSTVTWARSNKKLTLL 335
LAR+TV A++ K +L
Sbjct: 222 ELARATVQRAQATKPALIL 240
>gi|448450776|ref|ZP_21592509.1| aspartate racemase [Halorubrum litoreum JCM 13561]
gi|445811287|gb|EMA61295.1| aspartate racemase [Halorubrum litoreum JCM 13561]
Length = 231
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 113/243 (46%), Gaps = 33/243 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPAL---NEELFHASVHSLKSK 140
+GI+GG+ +T+NF +L+ + A+ ++ +V NDP + N + S L
Sbjct: 11 LGILGGMGPEATINFQRELLAETPAEIDQDHIVTLVSNDPKIPDRNAAILDGSESPLP-- 68
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
L+ L++AGA I MPC+ +H ++GD+ + F+++ + +
Sbjct: 69 -------------RLQKNAKTLKEAGADVIAMPCNTAHYYYGDLKDSIEAEFINMIQTAS 115
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
L++ ++ R G+LAT L G Y N ++V P+ T I +
Sbjct: 116 NTLEQNGVE--------RAGLLATKTVLDVGIYDSYFANSPVDLVAPENKTRLMEAIYAV 167
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALAR 320
+ +HR E + L+ + I+ L R A++IG ++ VL + L + DP+ LAR
Sbjct: 168 KRGDHR--EATQTLIPV-IEYLERRGCEALLIGCSDLS-VLSIESELTE--YDPITLLAR 221
Query: 321 STV 323
+V
Sbjct: 222 ESV 224
>gi|385871288|gb|AFI89808.1| Aspartate racemase [Pectobacterium sp. SCC3193]
Length = 238
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 24/245 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IG++GG+ +T++ L K+V + A+ ++ P VV N P + + A + +S
Sbjct: 6 IGVLGGMGPLATVDLLYKIVEETPARRDQDHVPVVVWNVPQIPDRQ-QALAGTGESP--- 61
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV---A 200
L + A+ Q L + IV+PC+ +H W ++E P +H+ +
Sbjct: 62 LPTLLNAIQQ--------LNRLSVSHIVVPCNTAHHWFDALAEASHAPLVHIADATLHAI 113
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPT 259
L E K P +IG++AT TL+AG+YQ++ Q G E V+P++ M + +P
Sbjct: 114 TPLVEEKEVPQ------KIGLIATHGTLNAGWYQQRFTTQLGAETVVPNEQEMTTLFVPG 167
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC-IDPMDAL 318
A+ +++ LL L+ R +++ E+ L + IDP AL
Sbjct: 168 CYAVKRGELQHGGRLLEQFAAQLVERGAERLVLACTEVPPALEAVSSRWRDISIDPTRAL 227
Query: 319 ARSTV 323
A++ V
Sbjct: 228 AQACV 232
>gi|445443774|ref|ZP_21442720.1| aspartate racemase [Acinetobacter baumannii WC-A-92]
gi|444762437|gb|ELW86801.1| aspartate racemase [Acinetobacter baumannii WC-A-92]
Length = 226
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 7/179 (3%)
Query: 155 LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAG 214
+ H LE++G I +PC+ +H WH D+ + I L++ E +++ LK ++G
Sbjct: 54 MLHGLKILERSGVSKIAIPCNTAHFWHSDLQQHTHIQILNMVEITVQQI----LKNYQSG 109
Query: 215 SGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNL 274
++G+LAT LS YQ +L ++ +E +P + A+ + A +
Sbjct: 110 D--KVGILATKGALSTQLYQIELSKHSIPFIINSDEEIEQEFMPAVYAVKRNETAKAGIV 167
Query: 275 LRIGIQLLLVRAVNAVIIGSDEMQ-GVLPKDDPLLKKCIDPMDALARSTVTWARSNKKL 332
+ Q L+ + +++I+ E+ G+ P+L D LA + V W N +
Sbjct: 168 FQELSQRLIDKGADSIILACTEIPIGLHAIQSPILDVSFDTTQILADACVNWFYRNTQF 226
>gi|254253826|ref|ZP_04947143.1| Aspartate racemase [Burkholderia dolosa AUO158]
gi|124898471|gb|EAY70314.1| Aspartate racemase [Burkholderia dolosa AUO158]
Length = 233
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 29/246 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IG++GG+ +T++F+ +++ + A+ ++ P +V N + + +
Sbjct: 4 IGVLGGMGPLATVDFMHRVIRLTRARCDQDHLPMLVANLTRMPDRSRAITDGDTDPLPAL 63
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
LD I L ++G I +PC+ +H W+ + + P LH+ + L
Sbjct: 64 LDGID------------LLNRSGVDLIAIPCNTAHHWYAPLRARSAAPILHIVDTAVAAL 111
Query: 204 KEAKLKPLEAGSGVR-IGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
+GVR + VLAT TL++G YQ L+ +G E V+P AT + I I A
Sbjct: 112 P----------AGVRRVAVLATGGTLASGLYQSALRARGIEPVMP-GATAQRDIAACIAA 160
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDE--MQGVLPKDDPLLKKCIDPMDALAR 320
+ ++ A L + L+ R V+ ++G E + D PL +D LAR
Sbjct: 161 VKAGRVDAAGRQLSRALATLVRRDVDVAVMGCTEIPIAAHALGDAPL--ALVDTTHELAR 218
Query: 321 STVTWA 326
+TV +A
Sbjct: 219 ATVAYA 224
>gi|209520237|ref|ZP_03269006.1| aspartate racemase [Burkholderia sp. H160]
gi|209499312|gb|EDZ99398.1| aspartate racemase [Burkholderia sp. H160]
Length = 512
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 37/260 (14%)
Query: 81 QANTIGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCNDPALNEELFHASVHSLK 138
+A +G++GG+ ++T++F+GK+V + A+D + +V +P + + H
Sbjct: 254 RAFRLGVVGGIGPAATVDFMGKVVRNTPAARDQDHL-RIIVEQNPQIPDRTAALLGHG-D 311
Query: 139 SKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
T+ L A +N LE GA I +PC+ +HA+ + +P +++ C
Sbjct: 312 DPTLALY----AACKN-------LEDGGADLIAIPCNTAHAFVERIRPALRVPVVNMPGC 360
Query: 199 VAKELKEAKLKPLEAGSGVR-IGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT----ME 253
A L+E G+R +GVLAT TL++ Y++ L +GF V P A M
Sbjct: 361 TADYLRETF-------PGLREVGVLATSGTLASRVYEQALDARGFVQVAPSAAAQARLMN 413
Query: 254 HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK---- 309
+ P H E +L + L+ + V +++ E+ +L +P+L
Sbjct: 414 AIYGPHGAKAGHTSGECCDDLA-AAVDDLVAQGVQVIVLACTELPLLL--REPVLACPGG 470
Query: 310 ---KCIDPMDALARSTVTWA 326
+ +DP D LAR V +A
Sbjct: 471 RVVRLVDPTDVLARRCVEYA 490
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 14/156 (8%)
Query: 159 RAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKE---------AKLK 209
RAF E+ G IV+PC +SH + ++S ++P ++ ++ ++ A+
Sbjct: 69 RAF-EKRGVDAIVLPCFLSHTFIDELSANLTVPVANIMTALSAHVRRTYPSARRNGARRN 127
Query: 210 PLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI---EALNHR 266
RIGVL + A ++G ++ F+V+ P T + + E ++H
Sbjct: 128 GARRNGARRIGVLTSAAIRASGLFERYFDAGQFDVLYPRNDTGFDCVTSAVYGDEGIHHG 187
Query: 267 DMEG-ARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL 301
+ G + LLR L+ + V+ ++ G E+ VL
Sbjct: 188 RLYGRSVELLRAACADLVAQGVDVIVPGLAEIGLVL 223
>gi|49479190|ref|YP_036748.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49330746|gb|AAT61392.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
Length = 226
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST ++Y + + A N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTS------LYYKHINTLTLSQY------AQNAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNALVTVAKKVEKSGADCLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY+ +L N E ++P D+ + HVI+
Sbjct: 112 EQNIK--------RIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVIL 159
>gi|295676130|ref|YP_003604654.1| aspartate racemase [Burkholderia sp. CCGE1002]
gi|295435973|gb|ADG15143.1| aspartate racemase [Burkholderia sp. CCGE1002]
Length = 519
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 69/277 (24%)
Query: 80 NQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
+A +G++GG+ ++T++F+GK VV N PA ++
Sbjct: 253 QRAFRLGVVGGIGPAATVDFMGK---------------VVRNTPAARDQ----------- 286
Query: 140 KTVQLDHIRGAVSQN--------------------LRHKRAFLEQAGARCIVMPCHISHA 179
DHIR V QN L LE+ GA I +PC+ +HA
Sbjct: 287 -----DHIRIMVEQNPQIPDRTAALLGRGDDPTLALYAACKTLEEGGADLIAIPCNTAHA 341
Query: 180 WHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVR-IGVLATDATLSAGFYQEKLQ 238
+ + +P +++ C A L+E G+R +GVLAT TL++ Y++ L
Sbjct: 342 FVERLQPALRVPIVNMLTCTADYLRETF-------PGLREVGVLATSGTLASRVYEQVLD 394
Query: 239 NQGFEVVLPDKAT----MEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGS 294
+G + P A M + P H E +L + L+ + V +++
Sbjct: 395 ARGLAQIAPSAAAQARLMNAIYGPRGAKAGHTSGECCDDLA-AAVDDLVAQGVQVIVLAC 453
Query: 295 DEM-----QGVLPKDDPLLKKCIDPMDALARSTVTWA 326
E+ + VL + + +DP D LAR V +A
Sbjct: 454 TELPLLLREPVLASPGGRVVRLVDPTDVLARRCVAYA 490
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 68/156 (43%), Gaps = 14/156 (8%)
Query: 159 RAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK---------EAKLK 209
RAF E+ G IV+PC +SH + +++ ++P ++ +++ ++ A+
Sbjct: 69 RAF-EKRGVDAIVLPCFLSHTFIDELTTNVTVPVANIMTALSEHVRCTYPSARRGGARRD 127
Query: 210 PLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI---EALNHR 266
RIGVL + A + G ++ + F+V P T + + E +
Sbjct: 128 GARRDGARRIGVLTSAAIRANGLFERYFEAGQFDVCYPRNDTDFDCVTSAVFGTEGIRAG 187
Query: 267 DMEG-ARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL 301
+ G LLR L+ + V+ ++ G E+ VL
Sbjct: 188 RLHGRPVELLRTACADLVAQGVDVIVPGLVEIGLVL 223
>gi|186474121|ref|YP_001861463.1| aspartate racemase [Burkholderia phymatum STM815]
gi|184196453|gb|ACC74417.1| aspartate racemase [Burkholderia phymatum STM815]
Length = 487
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 117/282 (41%), Gaps = 83/282 (29%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
+G++GGV ++T +F+ K VV N PA+ ++
Sbjct: 227 LGVVGGVGPAATADFMHK---------------VVRNTPAVRDQ---------------- 255
Query: 145 DHIRGAVSQN--------------------LRHKRAFLEQAGARCIVMPCHISHAWHGDV 184
DHI+ V QN L LE GA I +PC+ +HA+ +
Sbjct: 256 DHIKVIVEQNPQIPDRTDCLTGKGPDPTLALYATCRKLEDGGANLIAIPCNTAHAFIAPI 315
Query: 185 SEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEV 244
IP +++ A L+ S +RIG+LATD T+++G Y+E L+ +G
Sbjct: 316 EARLRIPIVNMMSVTADFLRATF------PSVLRIGLLATDGTIASGVYREALEARGLAE 369
Query: 245 VLPDKATMEHVIIPTIEALNHRDMEGARNL------------LRIGIQLLLVRAVNAVII 292
VLP P ++A + GAR + + ++ LL++ V +++
Sbjct: 370 VLPP---------PAMQARVTNAIYGARGVKAGFTSGECVDDIIAAVESLLLQQVEIILL 420
Query: 293 GSDEMQGVLPKDDPLLK-----KCIDPMDALARSTVTWARSN 329
E+ + P+ + + + +DP D LA+S V +AR
Sbjct: 421 ACTELPLLFPQAITVTRHGRTAQFVDPADVLAKSCVEFARGK 462
>gi|154496370|ref|ZP_02035066.1| hypothetical protein BACCAP_00658 [Bacteroides capillosus ATCC
29799]
gi|150274453|gb|EDN01530.1| aspartate racemase [Pseudoflavonifractor capillosus ATCC 29799]
Length = 235
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 117/249 (46%), Gaps = 24/249 (9%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSL 137
+N+A +GI+GG+ +T +F +++ + A +E P V+ +D + +
Sbjct: 1 MNEAK-LGILGGMGPQATQDFYQRILDRTDAACDQEHLPTVILSDTRMPD---------- 49
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
++ + G + L+ + LEQ G I +PC+ SH + + SIP +H+
Sbjct: 50 RTSAILGGDAEGCYRRLLQDAKT-LEQVGCTAIAIPCNTSHFFADRLQGELSIPIIHM-- 106
Query: 198 CVAKELKEAKLKPLEAGSGV-RIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
++E +K L + GV ++G+LATD T+ G YQ + + QG P ++ V+
Sbjct: 107 -----VRET-VKVLSSDPGVHKVGILATDGTVRTGVYQRECEAQGLTAFSP-PPEVQKVV 159
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
+ I + +G+R + + L +A I+G E+ V PL + +D MD
Sbjct: 160 MSIIYDEIKKGEKGSREKFAVMDRCLREAGCDAAILGCTELS-VYRTYHPLPEFYVDAMD 218
Query: 317 ALARSTVTW 325
LA +T+
Sbjct: 219 ILAERCITY 227
>gi|365839650|ref|ZP_09380883.1| aspartate racemase [Anaeroglobus geminatus F0357]
gi|364564071|gb|EHM41847.1| aspartate racemase [Anaeroglobus geminatus F0357]
Length = 230
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 42/232 (18%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS--KT 141
TIG+IGG+S ST+ + + V N+ + +EL +HS K +
Sbjct: 3 TIGLIGGMSWESTVTY-----------------YQVINET-VKKEL--GGLHSAKCILYS 42
Query: 142 VQLDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
V D I S +K A LE+AGA IV+ + H ++S ++P L
Sbjct: 43 VDFDEIEKYQSAGEWNKSAEVLAQAASALERAGADFIVICTNTMHKVAPEISRKITVPLL 102
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
H+ + A ELK++ +K ++G+L T T+ FY+ LQ G EV++PD A +E
Sbjct: 103 HIADMTAIELKKSNIK--------KVGLLGTKYTMQQAFYKNVLQANGIEVIVPDDAGIE 154
Query: 254 HV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK 303
V II + + LRI I L + +I+G E+ G+L K
Sbjct: 155 VVNSIIYDELCIGKISAQSKAAYLRI-ISELSNKGAQGIILGCTEI-GLLVK 204
>gi|91782822|ref|YP_558028.1| aspartate racemase [Burkholderia xenovorans LB400]
gi|91686776|gb|ABE29976.1| Aspartate racemase [Burkholderia xenovorans LB400]
Length = 518
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 116/276 (42%), Gaps = 69/276 (25%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
+G++GGV ++T++F+ KLV N PA ++
Sbjct: 243 VGVLGGVGPAATVDFMAKLVR---------------NTPAACDQ---------------- 271
Query: 145 DHIRGAVSQN--------------------LRHKRAFLEQAGARCIVMPCHISHAWHGDV 184
DHI+ V QN L LE GA I +PC+ +HA+ +
Sbjct: 272 DHIKVMVEQNPQIPDRTAALLGSGEDPTLALYAACRTLEDGGADLIAIPCNTAHAFVERI 331
Query: 185 SEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVR-IGVLATDATLSAGFYQEKLQNQGFE 243
IP +++ C A L+E G+R IGVLAT TL++ Y++ L+ +GF
Sbjct: 332 QPSLGIPIVNMLTCTADYLRETF-------PGLREIGVLATTGTLASRVYEQSLEARGFV 384
Query: 244 VVLPD---KATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGV 300
++P +A + H + A R+ L + L+ + V +++G E+ +
Sbjct: 385 QIVPGEQAQARLMHAVYGPKGAKAGFTSGECRDDLAAAVDDLIAQGVQVIVLGCTELP-L 443
Query: 301 LPKDDPL------LKKCIDPMDALARSTVTWARSNK 330
L +D L + + +DP + LA+ V +A +
Sbjct: 444 LLRDAALACAAGRVVRLVDPTEVLAKRCVAYALGER 479
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 159 RAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVR 218
RAF E+ G IV+PC +SH + ++S ++P ++ ++ ++ A S R
Sbjct: 69 RAF-EKRGVEAIVLPCFLSHTFIDELSANVAVPVANIMTALSAHVRRAF------PSVRR 121
Query: 219 IGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+GVL +DA G ++ F+V+ P
Sbjct: 122 VGVLTSDAIRDNGLFERYFDAARFDVLHP 150
>gi|422348224|ref|ZP_16429117.1| aspartate racemase [Sutterella wadsworthensis 2_1_59BFAA]
gi|404659477|gb|EKB32324.1| aspartate racemase [Sutterella wadsworthensis 2_1_59BFAA]
Length = 461
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 118/257 (45%), Gaps = 28/257 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G+IGG+ ++T++ K+V + AK+ +E VV +P +++ + LK
Sbjct: 218 VGLIGGLGPAATVDLYDKIVKATPAKNDQEHFKLVVEQNPQISDR----TACLLKGGADP 273
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
+ G + L++ G I++PC+ +HA+ + IPF+++ +E+
Sbjct: 274 TLAMYGCARR--------LQKDGCDAIIVPCNTAHAFVPYLERHLDIPFINMQIATMEEI 325
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII----PT 259
K AKL G RIG+LAT T+ G Y +K + + +PD+ E V+ P
Sbjct: 326 K-AKL-----GDKARIGLLATSGTVQTGIYGDKAKALNLPMFVPDELHQERVMAAIYGPL 379
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL----KKC-IDP 314
+ D + +L+ L+ N +I+G E+ +L + D + + C +DP
Sbjct: 380 GAKAGYTDGQCREDLVSAAEYLVKTYDCNCLILGCTELPLILDECDDFVCAGKEVCVVDP 439
Query: 315 MDALARSTVTWARSNKK 331
ALAR V A K
Sbjct: 440 TSALARKVVRIATETNK 456
>gi|47569596|ref|ZP_00240273.1| aspartate racemase [Bacillus cereus G9241]
gi|47553711|gb|EAL12085.1| aspartate racemase [Bacillus cereus G9241]
Length = 226
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 37/230 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT---MEHVIIPTI- 260
E +K RIG+L T T+ FY+ +L N E ++P+K + HVI+ +
Sbjct: 112 EQNIK--------RIGLLGTKQTMEQDFYKSRLANYNIETIIPNKEERNFIHHVILNELS 163
Query: 261 -----EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
E + ++ ++L++ G + +++G E+ ++ +DD
Sbjct: 164 KGIISETSKEKLLQITKSLIQNGAE--------GILLGCTEIPLLISQDD 205
>gi|271965998|ref|YP_003340194.1| aspartate racemase [Streptosporangium roseum DSM 43021]
gi|270509173|gb|ACZ87451.1| aspartate racemase [Streptosporangium roseum DSM 43021]
Length = 301
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 23/179 (12%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEEC-PPFVVCNDPALNEELFHASVHSL 137
L+ +G++GG+ ++T++F GKLV +A ++ P V+ DP + + S+ L
Sbjct: 10 LSATRLVGVLGGMGPAATVDFYGKLVEETAATCDQGHVPVVIWGDPRVPDR----SLSLL 65
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
++R V L+QAG + +PC+ +HA+ +++ + + + E
Sbjct: 66 GGGEDPTPYLRRGVEA--------LKQAGCELLAVPCNTAHAFVPRLADEAGLELVSIIE 117
Query: 198 CVAKELKEAKLKPLEAGSGVRI-GVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
A L A GVR GVLAT TL AG Y + L+ +G V+ PD+ V
Sbjct: 118 VTADAL---------AADGVRAAGVLATSGTLHAGLYADALRRRGVAVIEPDEPGQRQV 167
>gi|423614383|ref|ZP_17590241.1| aspartate racemase [Bacillus cereus VD107]
gi|401238698|gb|EJR45133.1| aspartate racemase [Bacillus cereus VD107]
Length = 227
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 22/169 (13%)
Query: 82 ANTIGIIGGVSVSSTLNFLGKLVWYSAKDAE-ECPPFVVCNDPALNEELFHASVHSLKSK 140
+ TIGI+GG+ ++TL+ K++ + E E ++ N+P + H+ + L
Sbjct: 2 SKTIGILGGMGPAATLDLFHKIILNTPVQTEQEHHRIIIYNNPKIPPRTQHS--YPLP-- 57
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
+ I+ A+ LE+AGA I+MPC+ +H W + IPF + E
Sbjct: 58 ----ELIKSAI---------LLEKAGADFIIMPCNTAHIWLEQIKATIQIPFYSIIETTV 104
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK 249
E+ + + +I +LAT+ T++ G YQ+ N +E++ P K
Sbjct: 105 ----ESIFLEEKDSTNKKILLLATETTINDGLYQKAFHNTPYEIITPIK 149
>gi|389870904|ref|YP_006378323.1| aspartate racemase family protein 2 [Advenella kashmirensis WT001]
gi|388536153|gb|AFK61341.1| aspartate racemase family protein 2 [Advenella kashmirensis WT001]
Length = 270
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 21/242 (8%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECP-PFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G++GG+ + F +LV + A++ P ++ NDP + + S L
Sbjct: 23 LGVLGGMGPLAGATFAARLVQLTPVTADQAHIPVLLRNDPRIPDR----SAAQLAGGPSP 78
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L +R + L++ GA+CI +PC+ +H W + + +P LH+ E V ++L
Sbjct: 79 LPAMRQGMQD--------LQRWGAQCIAIPCNTAHLWFEQLRDSVQVPVLHIVESVIQDL 130
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ + +GV+ T AT+ YQ+ L+ G+E + ++ + I A+
Sbjct: 131 QRNGI------CDGPVGVMGTPATMQLELYQKALRAAGYEPFTGNDNSIRDWSVQAIAAV 184
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP--KDDPLLKKCIDPMDALARS 321
E A + L AVI+G E+ +P + D D +DALA +
Sbjct: 185 KSNQNELAFAPAAAAVNRLAQMGARAVILGCTELPLAIPPSRRDAFDVVISDSIDALAHA 244
Query: 322 TV 323
+
Sbjct: 245 VL 246
>gi|217960099|ref|YP_002338657.1| aspartate racemase family protein [Bacillus cereus AH187]
gi|229139289|ref|ZP_04267861.1| Aspartate racemase [Bacillus cereus BDRD-ST26]
gi|375284614|ref|YP_005105053.1| aspartate racemase family protein [Bacillus cereus NC7401]
gi|423352408|ref|ZP_17330035.1| aspartate racemase [Bacillus cereus IS075]
gi|423568483|ref|ZP_17544730.1| aspartate racemase [Bacillus cereus MSX-A12]
gi|217065312|gb|ACJ79562.1| aspartate racemase family protein [Bacillus cereus AH187]
gi|228644145|gb|EEL00405.1| Aspartate racemase [Bacillus cereus BDRD-ST26]
gi|358353141|dbj|BAL18313.1| aspartate racemase family protein [Bacillus cereus NC7401]
gi|401091507|gb|EJP99647.1| aspartate racemase [Bacillus cereus IS075]
gi|401210771|gb|EJR17522.1| aspartate racemase [Bacillus cereus MSX-A12]
Length = 226
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 37/230 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT---MEHVIIPTI- 260
E +K RIG+L T T+ FY+ +L N E ++P++ + HVI+ +
Sbjct: 112 EQNIK--------RIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEERNFIHHVILNELS 163
Query: 261 -----EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
E + ++ ++L++ G + +++G E+ ++ KDD
Sbjct: 164 KGIISETSKEKLLQITKSLIQNGAE--------GILLGCTEIPLLISKDD 205
>gi|421652183|ref|ZP_16092546.1| aspartate racemase [Acinetobacter baumannii OIFC0162]
gi|425750834|ref|ZP_18868788.1| aspartate racemase [Acinetobacter baumannii WC-348]
gi|445457298|ref|ZP_21446443.1| aspartate racemase [Acinetobacter baumannii OIFC047]
gi|408506456|gb|EKK08164.1| aspartate racemase [Acinetobacter baumannii OIFC0162]
gi|425484619|gb|EKU51019.1| aspartate racemase [Acinetobacter baumannii WC-348]
gi|444776878|gb|ELX00915.1| aspartate racemase [Acinetobacter baumannii OIFC047]
Length = 226
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 7/179 (3%)
Query: 155 LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAG 214
+ H LE++G I +PC+ +H WH D+ + I L++ E +++ LK ++G
Sbjct: 54 MLHGLKILERSGVSKIAIPCNTAHFWHSDLQQHTHIQILNMVEITVQQI----LKNYQSG 109
Query: 215 SGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNL 274
++G+LAT LS YQ +L ++ +E +P + A+ + A +
Sbjct: 110 D--KVGILATKGALSTQLYQIELSKHSIPFIINSDEEIEQEFMPAVYAVKRNETAKAGIV 167
Query: 275 LRIGIQLLLVRAVNAVIIGSDEMQ-GVLPKDDPLLKKCIDPMDALARSTVTWARSNKKL 332
+ Q L+ + ++I+ E+ G+ P+L D LA + V W + +L
Sbjct: 168 FQELSQRLIDKGAGSIILACTEIPIGLHAIQSPILDVSFDTTQILADACVNWFYRDTQL 226
>gi|225017475|ref|ZP_03706667.1| hypothetical protein CLOSTMETH_01402 [Clostridium methylpentosum
DSM 5476]
gi|224949714|gb|EEG30923.1| hypothetical protein CLOSTMETH_01402 [Clostridium methylpentosum
DSM 5476]
Length = 239
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 123/256 (48%), Gaps = 37/256 (14%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSL-KSKT 141
++G+IGG+ +T FL +V + AK +E +V N P + + + + L KSK
Sbjct: 3 SLGVIGGLGPMATAYFLELIVQMTDAKTDQEHLDVIVFNRPDVPDR----TAYILGKSKD 58
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH-VGECVA 200
+ + LR LE GA C+ PC SH ++ D +PFL+ V E VA
Sbjct: 59 SPFEPM-------LRTAHT-LETLGASCLAAPCITSHCFYEDFQAAVRVPFLNMVAETVA 110
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME---HVII 257
LK+ +K R G+LAT T+ +Q++L+ QG E V+P + E H+I
Sbjct: 111 -HLKQNGVK--------RAGILATTGTIHTQLFQKELEKQGLEWVIPCEIGQEQVMHLIY 161
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNA--VIIGSDEMQGVLPKDDPLLKKCIDPM 315
++A +++ R + +R A +I+G E+ ++ +D P+ C+D +
Sbjct: 162 NNVKAGQPVELD------RFELVSSKLREAGAECLILGCTEL-SLIKRDYPVGPGCLDAL 214
Query: 316 DALA-RSTVTWARSNK 330
+ LA RS +T + K
Sbjct: 215 EVLAQRSILTCGKPLK 230
>gi|84498424|ref|ZP_00997194.1| putative aspartate racemase [Janibacter sp. HTCC2649]
gi|84381167|gb|EAP97051.1| putative aspartate racemase [Janibacter sp. HTCC2649]
Length = 235
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 29/248 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV- 142
+GI+GGV +T+ F+ +++ + A ++ +V N HAS+ + V
Sbjct: 6 VGILGGVGPMATVYFMQRVLEMTDAGRDQDHVDMLVWN---------HASIPDRTAYIVG 56
Query: 143 QLDHIRGAV-SQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
D G V +Q+ R LE+AGA+ I +PC+ + A+ +V+ +IP + + V
Sbjct: 57 DSDESPGPVMAQDARE----LERAGAKFIALPCNTAQAFQDEVAAAVTIPVIDI-VAVTV 111
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
E +A + L +G+LATD TL A Y + G + PD + V+ +
Sbjct: 112 EAAKAAVPGL-----TTLGILATDGTLRAETYHRAAEAAGLTPIAPDDVVQKDVMSMIYD 166
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDE---MQGVLPKDDPLLKKCIDPMDAL 318
+ M +R+ ++ L + A+++G E +Q L D+P +D +DAL
Sbjct: 167 GVKA-GMPVSRDRFDAAVEHLRTKGAGAIVLGCTELSILQTDLKVDEP---DVVDSLDAL 222
Query: 319 ARSTVTWA 326
A TV A
Sbjct: 223 AARTVVLA 230
>gi|296330339|ref|ZP_06872820.1| aspartate racemase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305676056|ref|YP_003867728.1| aspartate racemase [Bacillus subtilis subsp. spizizenii str. W23]
gi|296152607|gb|EFG93475.1| aspartate racemase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305414300|gb|ADM39419.1| aspartate racemase [Bacillus subtilis subsp. spizizenii str. W23]
Length = 227
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 31/251 (12%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
IGI+ G+ ST F+ K++ Y A + + P ++C+ P F+A
Sbjct: 2 IGILAGMGPRSTSPFIDKVIDYCQKLYGASNDIDYPHMMICSCPTP----FYADR----- 52
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+DH G + + + LE+ G I +PC+ +H ++ ++ + S+P LH+ E
Sbjct: 53 ---PIDH--GEMKRAIIDGAVKLEKTGVDFIALPCNTAHVYYEEIQQVLSVPLLHIIEET 107
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
KE+ P A GV VL TD+T+ + YQ+ L+ G EVV D +H +
Sbjct: 108 IKEI------PHSAKKGV---VLGTDSTIQSAIYQKGLKANGQEVVHKDH--WQHSVNQL 156
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALA 319
I A+ + L + + + + +I ++ VL + ID D LA
Sbjct: 157 IAAIKQPNHTQHTQALWQTLYEEISQHADIIISACTDLNAVLDHIQSEI-PIIDSSDCLA 215
Query: 320 RSTVTWARSNK 330
+STV+ +N+
Sbjct: 216 KSTVSTYLANQ 226
>gi|398832558|ref|ZP_10590716.1| aspartate racemase [Herbaspirillum sp. YR522]
gi|398223074|gb|EJN09428.1| aspartate racemase [Herbaspirillum sp. YR522]
Length = 486
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 123/276 (44%), Gaps = 43/276 (15%)
Query: 72 SKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH 131
+ S D L + +G++GGV ++T++F+ K+V N PA ++ H
Sbjct: 236 AASHDHLATRPFKLGVVGGVGPAATVDFMQKIVR---------------NTPAARDQ-DH 279
Query: 132 ASVHSLKSKTVQLDHIRGAVSQNLRHKRAF------LEQAGARCIVMPCHISHAWHGDVS 185
+H ++ + D V L A LE GA I +PC+ +HA+ +
Sbjct: 280 IKLHVEQNPQIP-DRTENLVGDGLDPTIALYATCKKLEDGGADLIAIPCNTAHAYVERIQ 338
Query: 186 EGCSIPFLHVGECVAKELKE--AKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFE 243
+IP +++ A+ ++ A+L R+G+LAT T+ +G YQ +L G
Sbjct: 339 GSLAIPIVNMLTVTAEAIRTRFAQL--------TRVGLLATSGTIGSGVYQRELAAHGLA 390
Query: 244 VVLPDKATMEHVI--IPTIEALNHRDMEG-ARNLLRIGIQLLLVRAVNAVIIGSDEMQGV 300
++P A + V+ I + + +G ++ +R + L+ + +I+G E+ +
Sbjct: 391 QLVPSPAMQQRVMNAIYGPQGVKAGFTQGQCQDDIRAALDDLVQQGAEVIILGCTELPLL 450
Query: 301 LPKDDPLLKK------CIDPMDALARSTVTWARSNK 330
LP P + +DP + LAR V +A + +
Sbjct: 451 LPS-GPWAHQGGSTLTLVDPTETLARRCVAYASATR 485
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 159 RAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVR 218
RAF EQ IV+PC +SH + ++S ++P + + +A ++ + R
Sbjct: 75 RAF-EQRHIDVIVLPCFLSHTFLDELSANTTLPIVDLMAALALHVRS------QYPHARR 127
Query: 219 IGVLATDATLSAGFYQEKLQNQGFEVVLP 247
IGVLA+D T A ++ GFEVV P
Sbjct: 128 IGVLASDFTREARLFERYFAAPGFEVVYP 156
>gi|71083965|ref|YP_266685.1| aspartate racemase [Candidatus Pelagibacter ubique HTCC1062]
gi|71063078|gb|AAZ22081.1| Aspartate racemase [Candidatus Pelagibacter ubique HTCC1062]
Length = 248
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 103/223 (46%), Gaps = 22/223 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IGI+GG+ + L+F KL + K +E P F++ N+ S+ +T
Sbjct: 2 IGILGGMGTQAGLDFCNKLAMLNRGKSDQEYPLFML-----YNKSNIPGRPESIGVQTKS 56
Query: 144 LDHIRGAVSQNLRHKRAF---------LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH 194
L I ++ R LE++G + IV+PC+ +H W+ D+ + IP ++
Sbjct: 57 LSTIPRNSKNTKKYNRVLKSLLDGCKSLEKSGCKFIVIPCNTAHYWYEDLRKKIKIPIIN 116
Query: 195 VGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEH 254
+ + V + K++ +IG+LAT+ TL Y +K+ + + ++ P
Sbjct: 117 MPKEVFIQTKKS------CKKNSKIGLLATEGTLKTEIY-DKIFKKDYVLIKPLSNLQTS 169
Query: 255 VIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
+ TI+ + +++ A ++ I+ L+ + +I+G E+
Sbjct: 170 SVNKTIKHVKMGNIKLAEKTIKPAIKYLIKQKCKKIILGCTEI 212
>gi|42781724|ref|NP_978971.1| aspartate racemase [Bacillus cereus ATCC 10987]
gi|402557146|ref|YP_006598417.1| aspartate racemase [Bacillus cereus FRI-35]
gi|423372541|ref|ZP_17349881.1| aspartate racemase [Bacillus cereus AND1407]
gi|42737647|gb|AAS41579.1| aspartate racemase family protein [Bacillus cereus ATCC 10987]
gi|401098978|gb|EJQ06988.1| aspartate racemase [Bacillus cereus AND1407]
gi|401798356|gb|AFQ12215.1| aspartate racemase [Bacillus cereus FRI-35]
Length = 226
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT---MEHVII 257
E +K RIG+L T T+ FY+ +L N E ++P+K + HVI+
Sbjct: 112 EQNIK--------RIGLLGTKQTMEQDFYKSRLANYSIETIIPNKEERNFIHHVIL 159
>gi|229030333|ref|ZP_04186379.1| Aspartate racemase [Bacillus cereus AH1271]
gi|228730965|gb|EEL81901.1| Aspartate racemase [Bacillus cereus AH1271]
Length = 196
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST ++Y + + D N +L S+ + T+
Sbjct: 5 IGLIGGLSWESTS------LYYKHINTLTLSQY----DQ--NAKLVLYSMDFGEVTTLLQ 52
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E +GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 53 NHQYEEVKNELVTVAKKVENSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 112
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY+ +L N E ++P D+ + HVI+
Sbjct: 113 EQNIK--------RIGLLGTRQTMEQDFYKSRLANYNIETIIPIKEDRDFIHHVIL 160
>gi|225574214|ref|ZP_03782824.1| hypothetical protein RUMHYD_02278 [Blautia hydrogenotrophica DSM
10507]
gi|225038582|gb|EEG48828.1| aspartate racemase [Blautia hydrogenotrophica DSM 10507]
Length = 237
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 110/252 (43%), Gaps = 32/252 (12%)
Query: 80 NQANTIGIIGGVSVSSTLNFLGKLVWYSA--KDAEECPPFVVCNDPALNEELFHASVHSL 137
++ T+GIIGG+ +T + + K++ + D E V CN +
Sbjct: 4 SEKKTVGIIGGMGPLATCDLMEKIIRLTKARTDQENLHLVVDCNT-------------DI 50
Query: 138 KSKTVQ-LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
+T L+H V Q +R L+ GA +VM C+ +H ++ + IP LH+
Sbjct: 51 PDRTAAILEHGASPVPQLVRSG-IKLQGMGADVLVMSCNTAHYFYDSIVPYFDIPLLHMI 109
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
AK LK +++ + G+LAT TL+ G Y+E ++ +G E++ PD E V+
Sbjct: 110 RETAKHLKAQEIQ--------KAGLLATSGTLNCGVYREAMKREGIELLTPDGEDQEAVM 161
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK---DDPLLKKCID 313
+ + + ++ LL R +I+G E+ + + D P+ D
Sbjct: 162 GMIYQGVKAGRTDLDTRRFERAMEKLLERGAEVLILGCTELPVAVSRYGWDYPV----AD 217
Query: 314 PMDALARSTVTW 325
P LA S V +
Sbjct: 218 PTQILAESVVHY 229
>gi|229091655|ref|ZP_04222856.1| Aspartate racemase [Bacillus cereus Rock3-42]
gi|228691600|gb|EEL45352.1| Aspartate racemase [Bacillus cereus Rock3-42]
Length = 226
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
+E++GA C++M + H + +V SIP LH+G+ AKE+ E +K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAKEVESAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
L T T+ FY+ +L N E ++P D+ + HVI+
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVIL 159
>gi|228985744|ref|ZP_04145894.1| Aspartate racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|229156233|ref|ZP_04284329.1| Aspartate racemase [Bacillus cereus ATCC 4342]
gi|228627108|gb|EEK83839.1| Aspartate racemase [Bacillus cereus ATCC 4342]
gi|228773916|gb|EEM22332.1| Aspartate racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 226
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 37/230 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVENAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT---MEHVIIPTI- 260
E +K RIG+L T T+ FY+ +L N E ++P+K + HVI+ +
Sbjct: 112 EQNIK--------RIGLLGTKQTMEQDFYKSRLANFNIETIIPNKEERNFIHHVILNELS 163
Query: 261 -----EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
E + ++ ++L++ G + +++G E+ ++ +DD
Sbjct: 164 KGIISETSKEKLLQITKSLIQNGAE--------GILLGCTEIPLLISQDD 205
>gi|302336070|ref|YP_003801277.1| aspartate racemase [Olsenella uli DSM 7084]
gi|301319910|gb|ADK68397.1| aspartate racemase [Olsenella uli DSM 7084]
Length = 247
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 110/252 (43%), Gaps = 27/252 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GIIGGV +T F+ L+ + A ++ P +V NDP + + +
Sbjct: 6 LGIIGGVGPLATAYFMEMLIKKTPATSDQDNMPMIVFNDPQIPDRTAYI----------- 54
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
LDH R + +L+ AGA + + C+ +H ++ + + IP +++ E ++ +
Sbjct: 55 LDHGRPNPQPEMVKVARWLQDAGADYLAIACNTAHYFYAAIDDAVDIPVVNIMEETSRHI 114
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
E + G G R+G++AT+ T+ + +Q + G E V PD+A V + +
Sbjct: 115 AE------KVGHGGRVGLMATEGTVRSEVFQGYFKAMGLECVHPDEADQAQVSSLIYDGV 168
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGV---LPKDDPLLKKC--IDPMDAL 318
+LL I +L +AV+ G E+ + L D C D +D L
Sbjct: 169 KANADYDPGDLLDIAGRLRGA-GCDAVVCGCTELSVIYQDLLDDKTQTVPCWLFDSLDIL 227
Query: 319 ARSTVT---WAR 327
A V WAR
Sbjct: 228 AERCVQLYLWAR 239
>gi|196032514|ref|ZP_03099928.1| aspartate racemase family protein [Bacillus cereus W]
gi|195995265|gb|EDX59219.1| aspartate racemase family protein [Bacillus cereus W]
Length = 226
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
+E++GA C++M + H + +V SIP LH+G+ AKE+ E +K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
L T T+ FY+ +L N E ++P D+ + HVI+
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVIL 159
>gi|403057634|ref|YP_006645851.1| aspartate/glutamate racemase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402804960|gb|AFR02598.1| putative aspartate/glutamate racemase [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 234
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 93 VSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASV--HSLKSKTVQLDHIR 148
VS TL +G + W S P + + N+ N+ L A + HS+ ++ +
Sbjct: 2 VSKTLGLIGGMSWEST-----IPYYRIINEYVKNQLGGLHSAKIILHSVDFHEIERLQSQ 56
Query: 149 GAVSQN---LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKE 205
G Q+ L + L QAGA IV+ + H DV C +P LH+ + LK+
Sbjct: 57 GDWEQSAAVLSNIAVGLRQAGAEAIVICTNTMHKVADDVERACQLPLLHIADATGASLKQ 116
Query: 206 AKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPD---KATMEHVIIPTIE 261
LK ++G+L T T+ FY++++Q + G EV++PD K + +I +
Sbjct: 117 HGLK--------KVGLLGTRYTMEQDFYRQRIQERFGVEVIVPDHEGKEAVNRIIYDELC 168
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
N D +R + + IQ L + +I+G E+
Sbjct: 169 LGNIND--ASRQVYKDIIQQLEQQGAEGIILGCTEI 202
>gi|56460878|ref|YP_156159.1| aspartate racemase [Idiomarina loihiensis L2TR]
gi|56179888|gb|AAV82610.1| Aspartate racemase [Idiomarina loihiensis L2TR]
Length = 229
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 110/254 (43%), Gaps = 42/254 (16%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--------ELFHASVH 135
T+GIIGG+S ST + +L + +NE EL ASV
Sbjct: 3 TVGIIGGMSWESTSTYYRRL------------------NQLVNERLGGLHSAELLLASVD 44
Query: 136 SLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ +Q A +Q L K LE AGA CIV+ + H + +IP LH+
Sbjct: 45 FAPIEKMQSQGDWDAAAQALIGKARQLESAGAECIVIATNTMHKVAPQIETAVTIPLLHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATM 252
+ VA LK+ + +G+L T T+ FY+E+L+ +V++P D T+
Sbjct: 105 VDAVAAHLKQNSVH--------NVGLLGTRFTMQQPFYKERLEQNNVQVLVPEEEDSITV 156
Query: 253 EHVIIPTIEALNHRDMEGAR-NLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC 311
+ +I E + + E AR + LR+ I L R VI+G E+ G+L + +
Sbjct: 157 DSIIFK--ELCHGQFTEKAREHYLRV-IDSLAERGAQGVILGCTEI-GLLVQQEHSALPL 212
Query: 312 IDPMDALARSTVTW 325
D + R+ W
Sbjct: 213 FDTTELHCRAIADW 226
>gi|228927696|ref|ZP_04090745.1| Aspartate racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|229125032|ref|ZP_04254197.1| Aspartate racemase [Bacillus cereus 95/8201]
gi|228658408|gb|EEL14083.1| Aspartate racemase [Bacillus cereus 95/8201]
gi|228831946|gb|EEM77534.1| Aspartate racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 226
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
+E++GA C++M + H + +V SIP LH+G+ AKE+ E +K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
L T T+ FY+ +L N E ++P D+ + HVI+
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVIL 159
>gi|218903772|ref|YP_002451606.1| aspartate racemase family protein [Bacillus cereus AH820]
gi|218538671|gb|ACK91069.1| aspartate racemase family protein [Bacillus cereus AH820]
Length = 226
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
+E++GA C++M + H + +V SIP LH+G+ AKE+ E +K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
L T T+ FY+ +L N E ++P D+ + HVI+
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVIL 159
>gi|196040325|ref|ZP_03107626.1| aspartate racemase family protein [Bacillus cereus NVH0597-99]
gi|196028810|gb|EDX67416.1| aspartate racemase family protein [Bacillus cereus NVH0597-99]
Length = 226
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
+E++GA C++M + H + +V SIP LH+G+ AKE+ E +K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPTIEALNHRDMEGARNLLRIG 278
L T T+ FY+ +L N E ++P D+ + HVI+ + ++ + LL+I
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNELSKGIISEISKEK-LLQI- 178
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKDD 305
+ L+ +++G E+ ++ K+D
Sbjct: 179 TKSLIQNGAEGILLGCTEIPLLISKND 205
>gi|30262624|ref|NP_845001.1| aspartate racemase [Bacillus anthracis str. Ames]
gi|47527931|ref|YP_019280.1| aspartate racemase [Bacillus anthracis str. 'Ames Ancestor']
gi|49185467|ref|YP_028719.1| aspartate racemase [Bacillus anthracis str. Sterne]
gi|65319945|ref|ZP_00392904.1| COG1794: Aspartate racemase [Bacillus anthracis str. A2012]
gi|165868472|ref|ZP_02213132.1| aspartate racemase family protein [Bacillus anthracis str. A0488]
gi|167632270|ref|ZP_02390597.1| aspartate racemase family protein [Bacillus anthracis str. A0442]
gi|167637551|ref|ZP_02395830.1| aspartate racemase family protein [Bacillus anthracis str. A0193]
gi|170685313|ref|ZP_02876537.1| aspartate racemase family protein [Bacillus anthracis str. A0465]
gi|170704650|ref|ZP_02895116.1| aspartate racemase family protein [Bacillus anthracis str. A0389]
gi|177649807|ref|ZP_02932809.1| aspartate racemase family protein [Bacillus anthracis str. A0174]
gi|190565232|ref|ZP_03018152.1| aspartate racemase family protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|227814544|ref|YP_002814553.1| aspartate racemase family protein [Bacillus anthracis str. CDC 684]
gi|228915256|ref|ZP_04078850.1| Aspartate racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228933925|ref|ZP_04096768.1| Aspartate racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|229601854|ref|YP_002866941.1| aspartate racemase family protein [Bacillus anthracis str. A0248]
gi|254685210|ref|ZP_05149070.1| aspartate racemase family protein [Bacillus anthracis str.
CNEVA-9066]
gi|254722617|ref|ZP_05184405.1| aspartate racemase family protein [Bacillus anthracis str. A1055]
gi|254737661|ref|ZP_05195364.1| aspartate racemase family protein [Bacillus anthracis str. Western
North America USA6153]
gi|254743159|ref|ZP_05200844.1| aspartate racemase family protein [Bacillus anthracis str. Kruger
B]
gi|254751976|ref|ZP_05204013.1| aspartate racemase family protein [Bacillus anthracis str. Vollum]
gi|254760497|ref|ZP_05212521.1| aspartate racemase family protein [Bacillus anthracis str.
Australia 94]
gi|301054176|ref|YP_003792387.1| aspartate racemase [Bacillus cereus biovar anthracis str. CI]
gi|386736387|ref|YP_006209568.1| Aspartate racemase [Bacillus anthracis str. H9401]
gi|421510973|ref|ZP_15957855.1| aspartate racemase [Bacillus anthracis str. UR-1]
gi|421636435|ref|ZP_16077034.1| aspartate racemase [Bacillus anthracis str. BF1]
gi|423551604|ref|ZP_17527931.1| aspartate racemase [Bacillus cereus ISP3191]
gi|30257256|gb|AAP26487.1| aspartate racemase family protein [Bacillus anthracis str. Ames]
gi|47503079|gb|AAT31755.1| aspartate racemase family protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49179394|gb|AAT54770.1| aspartate racemase family protein [Bacillus anthracis str. Sterne]
gi|164715198|gb|EDR20715.1| aspartate racemase family protein [Bacillus anthracis str. A0488]
gi|167514100|gb|EDR89467.1| aspartate racemase family protein [Bacillus anthracis str. A0193]
gi|167532568|gb|EDR95204.1| aspartate racemase family protein [Bacillus anthracis str. A0442]
gi|170130451|gb|EDS99312.1| aspartate racemase family protein [Bacillus anthracis str. A0389]
gi|170670673|gb|EDT21412.1| aspartate racemase family protein [Bacillus anthracis str. A0465]
gi|172084881|gb|EDT69939.1| aspartate racemase family protein [Bacillus anthracis str. A0174]
gi|190563259|gb|EDV17224.1| aspartate racemase family protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|227005097|gb|ACP14840.1| aspartate racemase family protein [Bacillus anthracis str. CDC 684]
gi|228825621|gb|EEM71411.1| Aspartate racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228844373|gb|EEM89430.1| Aspartate racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|229266262|gb|ACQ47899.1| aspartate racemase family protein [Bacillus anthracis str. A0248]
gi|300376345|gb|ADK05249.1| aspartate racemase [Bacillus cereus biovar anthracis str. CI]
gi|384386239|gb|AFH83900.1| Aspartate racemase [Bacillus anthracis str. H9401]
gi|401187442|gb|EJQ94515.1| aspartate racemase [Bacillus cereus ISP3191]
gi|401818977|gb|EJT18165.1| aspartate racemase [Bacillus anthracis str. UR-1]
gi|403396963|gb|EJY94200.1| aspartate racemase [Bacillus anthracis str. BF1]
Length = 226
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
+E++GA C++M + H + +V SIP LH+G+ AKE+ E +K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
L T T+ FY+ +L N E ++P D+ + HVI+
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVIL 159
>gi|269956674|ref|YP_003326463.1| aspartate racemase [Xylanimonas cellulosilytica DSM 15894]
gi|269305355|gb|ACZ30905.1| aspartate racemase [Xylanimonas cellulosilytica DSM 15894]
Length = 242
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 117/256 (45%), Gaps = 40/256 (15%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAE-ECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G++GGV +T FL ++V + D + + VV N HA+V +
Sbjct: 6 VGVLGGVGPLATAYFLQRVVVSTQADRDQDHVDLVVLN---------HATVPDRTA---- 52
Query: 144 LDHIRGAVSQN----LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+ G ++ L A LE GA +VMPC+ +H + V E ++PF+ + + V
Sbjct: 53 --FVLGTSPEDPGPVLARDAARLEGFGAELLVMPCNTAHYFTQQVLEAITVPFVSIID-V 109
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP-------DKATM 252
E A++ L A +G+LAT T+++ Y + +G EV+ P D+A +
Sbjct: 110 TVEAALARVPGLTA-----VGLLATAGTVASRVYHDAFAARGVEVLTPDDDGTTGDQAII 164
Query: 253 EHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC- 311
VI ++A D + LR L+ R V++G E+ V D LL +
Sbjct: 165 NAVIYDQVKAGLPADADA----LRAVAARLVERGAGVVVLGCTELS-VAAVDHDLLDEAP 219
Query: 312 -IDPMDALARSTVTWA 326
+D MD L R+T+T A
Sbjct: 220 FLDSMDQLVRATITRA 235
>gi|228946256|ref|ZP_04108585.1| Aspartate racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228813420|gb|EEM59712.1| Aspartate racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
Length = 226
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
+E++GA C++M + H + +V SIP LH+G+ AKE+ E +K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVESAISIPLLHIGDISAKEMVEQNIK--------RIGL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
L T T+ FY+ +L N E ++P D+ + HVI+
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVIL 159
>gi|337270251|ref|YP_004614306.1| aspartate racemase [Mesorhizobium opportunistum WSM2075]
gi|336030561|gb|AEH90212.1| aspartate racemase [Mesorhizobium opportunistum WSM2075]
Length = 269
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 22/174 (12%)
Query: 85 IGIIGGVSVSSTLNFLGKL--VWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
+GIIGG+ ++ +F KL + + +D + P ++ SV L +T
Sbjct: 10 LGIIGGLGPLASADFYFKLTRMTQAVRDNDHVPAVIL-------------SVPQLPDRTE 56
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
+ L + L + G CI +PC+ +H W+ ++ LH+G+ V E
Sbjct: 57 AILGNHDGPLAALIAAVSTLNELGVSCIAVPCNTAHHWYDQLAANSQARILHIGDAVVAE 116
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
+ + L+ G ++ +LAT TL +GFYQ+++ GF + LP +H +
Sbjct: 117 TR----RSLDRG---QVAILATRGTLVSGFYQDRMSAAGFGLCLPADTEFQHCV 163
>gi|238023769|ref|YP_002908001.1| Aspartate racemase [Burkholderia glumae BGR1]
gi|237878434|gb|ACR30766.1| Aspartate racemase [Burkholderia glumae BGR1]
Length = 509
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 33/251 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
IG++GGV ++T++FL KLV ++ A+D + V N + +T
Sbjct: 262 IGVVGGVGPAATVDFLRKLVDHTPAARDQDHLKVLVEQNP-------------QIPDRTA 308
Query: 143 QL--DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
L D VS KR LEQ GA + +PC+ +HA+ + IP +++ A
Sbjct: 309 HLIGDGPDPTVSLYAACKR--LEQGGADLVAIPCNTAHAFVERIQPHLGIPIINMLTVTA 366
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ L+E + L +GVLAT TL++G Y++ L +GF +P A V+
Sbjct: 367 RRLRE-RFPALR-----EVGVLATSGTLASGVYRDALAAEGFAQQVPPPALQARVMAAIY 420
Query: 261 EALNHRD--MEG-ARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK-----CI 312
+ EG R + + L+ V++G E+ +LP D + +
Sbjct: 421 GKFGVKAGFTEGRCREDIGAALDALIAAGAAVVLLGCTELPLLLPMADYVAPDGAHAVLV 480
Query: 313 DPMDALARSTV 323
DP + LA++ +
Sbjct: 481 DPTEVLAKACI 491
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 27/174 (15%)
Query: 86 GIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHAS----VHSLKSKT 141
GI+GG+ + + GKL+ + + P D L + + + V + + K
Sbjct: 15 GIVGGLGPLAGADVFGKLMRAALAQSGAEP-----LDAILEQRPWRGAGSDRVATSERKL 69
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
D IR E+ G +V+PC +SH + ++ + + + E V +
Sbjct: 70 YVFDRIR------------EFERRGVTIVVLPCFLSHTFLDELRANTPLAIVDIVEAVRE 117
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
++ A + RIGVLA+ AT A ++ F +V P + EHV
Sbjct: 118 HVRRAYP------AARRIGVLASAATREARLFERYFTAPDFVLVHPARDAAEHV 165
>gi|229161526|ref|ZP_04289506.1| Aspartate racemase [Bacillus cereus R309803]
gi|228621771|gb|EEK78617.1| Aspartate racemase [Bacillus cereus R309803]
Length = 226
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 37/230 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT---MEHVIIPTI- 260
E +K RIG+L T T+ FY +L N E ++P+K + HVI+ +
Sbjct: 112 EQDIK--------RIGLLGTKQTMEQDFYTSRLANYNIETIIPNKEERNFIHHVILNELS 163
Query: 261 -----EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
EA + ++ ++L++ G + +++G E+ ++ ++D
Sbjct: 164 KGIISEASKEKLLQITKSLIQNGAE--------GILLGCTEIPLLISQND 205
>gi|407783196|ref|ZP_11130400.1| aspartate racemase [Oceanibaculum indicum P24]
gi|407202946|gb|EKE72935.1| aspartate racemase [Oceanibaculum indicum P24]
Length = 256
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 111/266 (41%), Gaps = 36/266 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS------AKDAEECPPFVVCNDPALNEELFHASVHSLK 138
+G++GG+ +TL+F+ KL+ + + D E V CN N A
Sbjct: 9 VGVLGGLGPEATLDFMAKLLERTTALTGASTDQEHLHLLVDCNPKVPNRNRAVAGTGP-- 66
Query: 139 SKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
+ + +L L+ AGA +VM C+ +H W D+ +PFL + +
Sbjct: 67 -----------SPAPDLAAMARRLDAAGADLLVMACNTAHHWEADIRAATDLPFLSILDA 115
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIP 258
+ L+ +A +GVLAT+ T +A Y+ L+ G+ V D A +
Sbjct: 116 TLEALRR------QAPEARTVGVLATEGTRAARLYETSLERAGYRPVGFDDAAQARFM-- 167
Query: 259 TIEALNHRDMEGARN-----LLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCID 313
L +R G R +R + L + +A++ G E+ VL DD L ID
Sbjct: 168 ---ELLYRIKAGERGADIRAAMRSLAEGLAEQGADAIVAGCTEVPLVLGPDD-LSLPFID 223
Query: 314 PMDALARSTVTWARSNKKLTLLLDSQ 339
ALA TV A+ + L D++
Sbjct: 224 SSLALADLTVRIAKRLQPLPAFTDNK 249
>gi|423459312|ref|ZP_17436109.1| aspartate racemase [Bacillus cereus BAG5X2-1]
gi|401144390|gb|EJQ51920.1| aspartate racemase [Bacillus cereus BAG5X2-1]
Length = 226
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGADCLLMCSNTIHLFAEEVENAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY+ +L N E ++P D+ + HVI+
Sbjct: 112 EQNIK--------RIGLLGTKQTMEQDFYKSRLANFNIETIIPTEEDRNFIHHVIL 159
>gi|423398915|ref|ZP_17376115.1| aspartate racemase [Bacillus cereus BAG2X1-1]
gi|423481285|ref|ZP_17457975.1| aspartate racemase [Bacillus cereus BAG6X1-2]
gi|401146045|gb|EJQ53565.1| aspartate racemase [Bacillus cereus BAG6X1-2]
gi|401645765|gb|EJS63404.1| aspartate racemase [Bacillus cereus BAG2X1-1]
Length = 241
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 111/254 (43%), Gaps = 36/254 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
+GIIGG+ +T++ + K++ Y+ PA+ ++ +H + Q+
Sbjct: 12 VGIIGGMGPLATVDLMNKIISYT---------------PAMKDQ---DHIHIIADNYSQI 53
Query: 145 DHIRGAV-------SQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
A+ + + L+ AGA +V+ C+ +H ++ + +IP LH+
Sbjct: 54 PDRTTAILGKGIDPTPYIVQSAQRLQNAGADFLVIACNTAHFFYKAAKKSVNIPILHMPL 113
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
A+ ++E + ++G+LATD T+ YQ Q +V+ PD+ M+ ++
Sbjct: 114 ETARFVQENNFR--------KVGLLATDGTIKTELYQNSCQRYRIDVIEPDR-KMQEKVM 164
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I A+ D+E L + L A+I G E+ VL + + IDP +
Sbjct: 165 EGIYAIKSGDLETGFLYLSMVANKLKDSGAEAIIAGCTEIPLVLKSSENIC--VIDPTEI 222
Query: 318 LARSTVTWARSNKK 331
+A+ + A +K
Sbjct: 223 VAKMVIKKANRKEK 236
>gi|227114407|ref|ZP_03828063.1| putative aspartate/glutamate racemase [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 236
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 93 VSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASV--HSLKSKTVQLDHIR 148
VS TL +G + W S P + + N+ ++ L A + HS+ ++ +
Sbjct: 2 VSKTLGLIGGMSWEST-----IPYYRIINEYVKSQLGGLHSAKIILHSVDFHEIERLQSQ 56
Query: 149 GAVSQN---LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKE 205
G Q+ L + L QAGA IV+ + H DV C +P LH+ + LK+
Sbjct: 57 GDWEQSAAVLSNIAVGLRQAGAEAIVICTNTMHKVADDVEHACQLPLLHIADATGASLKQ 116
Query: 206 AKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPD---KATMEHVIIPTIE 261
LK ++G+L T T+ FY++++Q + G EV++PD K + +I +
Sbjct: 117 HGLK--------KVGLLGTRYTMEQDFYRQRIQERFGVEVIVPDHEGKEAVNRIIYDELC 168
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
N D +R + R IQ L + +I+G E+
Sbjct: 169 LGNIND--ASRQIYRDIIQQLEQQGAEGIILGCTEI 202
>gi|423611092|ref|ZP_17586953.1| aspartate racemase [Bacillus cereus VD107]
gi|401248545|gb|EJR54867.1| aspartate racemase [Bacillus cereus VD107]
Length = 227
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 106/226 (46%), Gaps = 29/226 (12%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST ++Y+ + + D N +L S+ + T+
Sbjct: 5 IGLIGGLSWESTS------LYYTHINTLTLSKY----DQ--NAKLVLYSMDFGEVTTLLQ 52
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E +GA C+++ + H + +V + SIP LH+G+ AK++
Sbjct: 53 NHQYEEVKNELVTVAKKVENSGAECLLICSNTVHLFAEEVEKAISIPLLHIGDVSAKKMV 112
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPTIE 261
E +K RIG+L T T+ FY+ +L N E ++P D+ + HVI+ +
Sbjct: 113 EHNIK--------RIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEDRTFIHHVILSELS 164
Query: 262 --ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
++H E LL+I L+ +++G E+ ++ ++D
Sbjct: 165 RGIISHASKE---KLLQIA-NTLIKNGAEGILLGCTEIPLLISQND 206
>gi|253687797|ref|YP_003016987.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251754375|gb|ACT12451.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 238
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 111/245 (45%), Gaps = 24/245 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G++GG+ +T++ L K++ + A ++ P V N P + + A + +S
Sbjct: 6 VGVLGGMGPLATVDLLHKIIEETPASRDQDHVPVVAWNVPQIPDRQ-QALAGTGESPLPM 64
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L H AV Q L IV+PC+ +H W ++E P +H+ + +
Sbjct: 65 LLH---AVRQ--------LNHLSVSHIVVPCNTAHHWFDALAEESYAPLIHIADATLHAI 113
Query: 204 K---EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPT 259
+AK P +IG++AT TL+ G+YQ++ Q G E V+PD+ M + +P
Sbjct: 114 TLPADAKKAPQ------KIGLIATHGTLNVGWYQQRFAAQLGAETVVPDEQEMTTLFVPG 167
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC-IDPMDAL 318
A+ +++ LL L+ R +++ E+ L + IDP AL
Sbjct: 168 CYAVKRGELQHGGRLLDQLAARLVARGAERLVLACTEVPPALETVSSRWRDISIDPTRAL 227
Query: 319 ARSTV 323
A++ V
Sbjct: 228 AQACV 232
>gi|126649551|ref|ZP_01721792.1| aspartate racemase [Bacillus sp. B14905]
gi|126593876|gb|EAZ87799.1| aspartate racemase [Bacillus sp. B14905]
Length = 233
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 22/178 (12%)
Query: 81 QANTIGIIGGVSVSSTLNFLGKLVW--YSAKDAEECPPFVVCNDPALNEELFHASVHSLK 138
+ T+GIIGGV +T+ F+G+++ A+ +E ++ ND + +
Sbjct: 2 KKQTLGIIGGVGPLATM-FIGEMIVRRTKAQKDQEHLHTIIDNDTNIPDR---------- 50
Query: 139 SKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
LD+ + + L GA I +PC+ +H ++ ++ EG IP LH+
Sbjct: 51 -TAFILDNTKENPVPVIIEDAKKLASVGADMIAIPCNTAHTFYDEIQEGSPIPVLHM--- 106
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
++E + E G+ R+G+LAT TL++ YQ+ L+ G V+PD HV+
Sbjct: 107 ----IRETAKRASELGAE-RVGILATTGTLTSRMYQDALEEYGITPVVPDNEMRAHVM 159
>gi|206973563|ref|ZP_03234481.1| aspartate racemase family protein [Bacillus cereus H3081.97]
gi|423575702|ref|ZP_17551821.1| aspartate racemase [Bacillus cereus MSX-D12]
gi|206747719|gb|EDZ59108.1| aspartate racemase family protein [Bacillus cereus H3081.97]
gi|401209027|gb|EJR15787.1| aspartate racemase [Bacillus cereus MSX-D12]
Length = 226
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 37/230 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT---MEHVIIPTI- 260
E +K RIG+L T T+ FY+ +L N E ++P++ + HVI+ +
Sbjct: 112 EQNIK--------RIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEERNFIHHVILNELS 163
Query: 261 -----EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
E + ++ ++L++ G + +++G E+ ++ +DD
Sbjct: 164 KGIISETSKEKLLQITKSLIQNGAE--------GILLGCTEIPLLISQDD 205
>gi|227329729|ref|ZP_03833753.1| putative aspartate/glutamate racemase [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 236
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 93 VSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASV--HSLKSKTVQLDHIR 148
VS TL +G + W S P + + N+ ++ L A + HS+ ++ +
Sbjct: 2 VSKTLGLIGGMSWEST-----IPYYRIINEYVKSQLGGLHSAKIILHSVDFHEIERLQSQ 56
Query: 149 GAVSQN---LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKE 205
G Q+ L + L QAGA IV+ + H DV C +P LH+ + LK+
Sbjct: 57 GDWEQSAAVLSNIAVGLRQAGAEAIVICTNTMHKVADDVERACQLPLLHIADATGTSLKQ 116
Query: 206 AKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPD---KATMEHVIIPTIE 261
LK ++G+L T T+ FY++++Q + G EV++PD K + +I +
Sbjct: 117 HGLK--------KVGLLGTRYTMEQDFYRQRIQERFGVEVMVPDHEGKEAVNRIIYDELC 168
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
N D +R + R IQ L + +I+G E+
Sbjct: 169 LGNIND--ASRQIYRDIIQQLEQQGAEGIILGCTEI 202
>gi|389852507|ref|YP_006354741.1| aspartate racemase [Pyrococcus sp. ST04]
gi|388249813|gb|AFK22666.1| aspartate racemase [Pyrococcus sp. ST04]
Length = 228
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 22/243 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IGI+GG+ +T+ ++V + AK ++ P V+ N+P + + + L
Sbjct: 4 IGILGGMGPLATVELFKRIVEKTPAKRDQDHPKIVIYNNPQIPDR----TAFILGKGEDP 59
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
++ + LE+ G I+MPC+ +HA+ D+ +P + + E AK+L
Sbjct: 60 RPYLIWTAKE--------LEECGVDFIIMPCNTAHAFIEDIQREIKVPIISMVEETAKKL 111
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+E + G+LAT T+ +G Y + L+ G +++P + E V+ + +
Sbjct: 112 REIGCN--------KAGLLATTGTIVSGVYHKALKKFGISLLIPSEKEQEIVMKGIYDGV 163
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTV 323
++E R LL + L R + +I G E+ VL +D L IDPMD +A V
Sbjct: 164 KAGNLELGRELLLGIAKTLEKRGADCIIAGCTEVSVVLKPED-LDVPLIDPMDVIAEVAV 222
Query: 324 TWA 326
A
Sbjct: 223 KKA 225
>gi|261821090|ref|YP_003259196.1| aspartate racemase [Pectobacterium wasabiae WPP163]
gi|261605103|gb|ACX87589.1| aspartate racemase [Pectobacterium wasabiae WPP163]
Length = 238
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 24/245 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IG++GG+ +T++ L K+V + A+ ++ P VV N P + + A + +S
Sbjct: 6 IGVLGGMGPLATVDLLYKIVEETPARRDQDHVPVVVWNVPQIPDRQ-QALAGTGESP--- 61
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L + A+ Q L + IV+PC+ +H W ++E P +H+ +
Sbjct: 62 LPTLLNAIQQ--------LNRLSVSHIVVPCNTAHHWFDALAEASHAPLVHIADATLH-- 111
Query: 204 KEAKLKPLEAGSGV--RIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPTI 260
+ PL V +IG++AT TL+AG+YQ++ Q E V+P++ M + +P
Sbjct: 112 ---AITPLVEEKEVPQKIGLIATHGTLNAGWYQQRFTTQLSAETVVPNEQEMTTLFVPGC 168
Query: 261 EALNHRDME-GARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC-IDPMDAL 318
A+ +++ G R L ++ Q L+ R +++ E+ L + IDP AL
Sbjct: 169 YAVKRCELQHGGRLLEQLAAQ-LVERGAERLVLACTEVPPALEAVSSRWRDISIDPTRAL 227
Query: 319 ARSTV 323
A++ V
Sbjct: 228 AQACV 232
>gi|407796495|ref|ZP_11143448.1| aspartate racemase [Salimicrobium sp. MJ3]
gi|407019011|gb|EKE31730.1| aspartate racemase [Salimicrobium sp. MJ3]
Length = 235
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 116/256 (45%), Gaps = 30/256 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSA--KDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
+G+IGG+ +T F ++V ++ KD + + L HAS+ +
Sbjct: 5 LGVIGGMGSEATSYFFKEVVAHTEVKKDQDHIDTVI----------LNHASLPDRTEAIL 54
Query: 143 QLD--HIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
D + Q+++ LE+ + I +PC+ +H ++ + E S+P +H+
Sbjct: 55 TGDDEEFINRIVQDIQ----LLEKINVQNIAIPCNTTHYFYNIIQEETSVPIIHMP---- 106
Query: 201 KELKEAKLKPLEAGSGVR-IGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
KE+ + V+ IG++AT T+ G Y+++ + G E+V P +A E V+
Sbjct: 107 ---KESVASAVSNFDDVKKIGIMATTGTIRTGIYRKECEEMGVELVAPSEAGQEDVMSLI 163
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALA 319
+ + + + G R+ Q L+ + +I+ E+ V + + L C+D M+ L
Sbjct: 164 YDEIK-KGLPGDRSKFDRAYQELIAAGSDVIILACTEL-SVFGEKNELYDNCLDAMEVLV 221
Query: 320 RSTVTWARSNKKLTLL 335
+ + ARS + +L
Sbjct: 222 KEVI--ARSEEYQEVL 235
>gi|56697504|ref|YP_167872.1| aspartate racemase [Ruegeria pomeroyi DSS-3]
gi|56679241|gb|AAV95907.1| aspartate racemase, putative [Ruegeria pomeroyi DSS-3]
Length = 485
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+AGA+ I +PC+ +HA+ + + IP + + A+ + L P E G ++ V
Sbjct: 312 LERAGAQAIAIPCNTAHAFVDRIQKNLDIPIISILTETARFI--GALHP-EIG---KVAV 365
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKA----TMEHVIIPTIEALNHRDMEGARNLLRI 277
LAT T+ +G YQ L++QG + VLPD ME + P+ A L ++
Sbjct: 366 LATSGTIQSGLYQSALRDQGLDPVLPDAGMQEMVMEVIYGPSGVKAGFTTGRCAAQLAQV 425
Query: 278 GIQLLLVRAVNAVIIGSDEMQGV-LPKDDPLLKKCIDPMDALARSTVTWARSNK 330
I + + A I+G E+ V LP P + IDP + LAR+ V A S +
Sbjct: 426 -IAAMTGQGAQAAILGCTELPLVHLPA--PAAIRLIDPTEVLARACVQAAISAR 476
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 17/167 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
+GI+GG+ + L KLV + +E ++ L+E + + L +
Sbjct: 8 LGIVGGLGARGGADILNKLVAATPVKSESDHREILFEQKPLSEPIPVSRPDYLPT----- 62
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
H + V L +EQ G ++PC I+H + +++ I + +G+ + EL
Sbjct: 63 -HRKFYVFDTLTR----MEQNGCDAALLPCFITHTFLEELAAELPIELISIGDAIVAELA 117
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
G+ RIGVL T GF+Q L +V+ PD T
Sbjct: 118 R------HHGAARRIGVLTTPYVRRNGFFQRMLTADQ-QVLYPDAGT 157
>gi|42779389|ref|NP_976636.1| aspartate racemase [Bacillus cereus ATCC 10987]
gi|42735305|gb|AAS39244.1| aspartate racemase [Bacillus cereus ATCC 10987]
Length = 234
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 38/259 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
+GIIGG+ +T++ + K++ Y+ PA+ ++ +H + Q+
Sbjct: 5 VGIIGGMGPLATVDLMNKIISYT---------------PAMKDQ---DHIHIIADNYSQI 46
Query: 145 DHIRGAV-------SQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
A+ + + L+ AGA +V+ C+ +H ++ V +IP LH+
Sbjct: 47 PDRTTAILGKGIDPTPYIVQSAQRLQNAGADFLVIACNTAHFFYKAVKRSVNIPILHMPL 106
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
A+ ++E + ++G+LATD T+ A YQ Q+ +V+ PDK M+ ++
Sbjct: 107 ETARFVQENNFR--------KVGLLATDGTVKAELYQNSCQDYRIDVIDPDKE-MQKKVM 157
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I A+ D++ L + L A+I G E+ VL + + IDP +
Sbjct: 158 EGIYAIKSGDLKTGCLHLSMVADKLKESGAEAIIAGCTEVPLVLKSSENIC--VIDPTEI 215
Query: 318 LARSTVTWARSNKKLTLLL 336
+A+ + A NK T L+
Sbjct: 216 VAKVVIKIA--NKTETELI 232
>gi|222096164|ref|YP_002530221.1| aspartate racemase [Bacillus cereus Q1]
gi|229196823|ref|ZP_04323564.1| Aspartate racemase [Bacillus cereus m1293]
gi|423605649|ref|ZP_17581542.1| aspartate racemase [Bacillus cereus VD102]
gi|221240222|gb|ACM12932.1| aspartate racemase [Bacillus cereus Q1]
gi|228586546|gb|EEK44623.1| Aspartate racemase [Bacillus cereus m1293]
gi|401243004|gb|EJR49375.1| aspartate racemase [Bacillus cereus VD102]
Length = 226
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT---MEHVII 257
E +K RIG+L T T+ FY+ +L N E ++P++ + HVI+
Sbjct: 112 EQNIK--------RIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEERNFIHHVIL 159
>gi|402566070|ref|YP_006615415.1| aspartate racemase [Burkholderia cepacia GG4]
gi|402247267|gb|AFQ47721.1| aspartate racemase [Burkholderia cepacia GG4]
Length = 230
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 110/256 (42%), Gaps = 41/256 (16%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + + + N + + H H+ KS V
Sbjct: 2 KTIGLIGGMSWESSAEY-----------------YRLINR---HSKALHGGHHNAKSVLV 41
Query: 143 QLD----------HIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+D H A+ + + LE AGA +V+ + H HG + S+PF
Sbjct: 42 TVDFAEIEALQRTHDWPALGERMADAARQLEAAGADLVVLTTNTMHRVHGAIEAAVSLPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKAT 251
LH+ + L+ A ++ R+ +L T T+ FY ++L+++ G +V++PD+
Sbjct: 102 LHIADPTGAALRAAGVE--------RVALLGTRYTMELPFYAKRLRDKFGLDVLVPDEPA 153
Query: 252 MEHVIIPTIEALNHRDME-GARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK 310
V + L H ++ G+R I L R AVI+G E+ ++ +D L
Sbjct: 154 RNDVHRIIYDELCHGVIDAGSRATYMAIIDELAKRGAQAVILGCTEITLLIGAEDSPL-P 212
Query: 311 CIDPMDALARSTVTWA 326
D A++ V WA
Sbjct: 213 VFDTTALHAKAAVEWA 228
>gi|298529163|ref|ZP_07016566.1| aspartate racemase [Desulfonatronospira thiodismutans ASO3-1]
gi|298510599|gb|EFI34502.1| aspartate racemase [Desulfonatronospira thiodismutans ASO3-1]
Length = 248
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 21/221 (9%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSL 137
+NQ +GIIGG+ +T++ + +++ + A D + +V N+P + +
Sbjct: 4 VNQEKIVGIIGGMGPEATVDLMSRVIRLTPALDDADHIRCIVDNNPKVPSRI-------- 55
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
+D + L+ LE GA + MPC+ SH + D+ SIP L++ E
Sbjct: 56 ---KALIDGAGESPVPELQDMARCLEAWGADFLAMPCNTSHYYFQDIQGAVSIPMLNLIE 112
Query: 198 CVAKELKEAKLKPLEAGSGV-RIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
+E+ L G+ ++G+L + A + G YQ+ G VV P+ A + V+
Sbjct: 113 ITVQEV-------LRQQPGIDKVGILGSTALILTGLYQQAFAASGVRVVYPETACQDRVM 165
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
+ I+ + M+ A + + L + A++I E+
Sbjct: 166 V-LIKDIKKGAMDLAFPVFESSVSSLETQGAQALVIACTEL 205
>gi|293402558|ref|ZP_06646693.1| aspartate racemase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|373453072|ref|ZP_09544970.1| aspartate racemase [Eubacterium sp. 3_1_31]
gi|291304072|gb|EFE45326.1| aspartate racemase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|371964219|gb|EHO81749.1| aspartate racemase [Eubacterium sp. 3_1_31]
Length = 231
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 115/253 (45%), Gaps = 32/253 (12%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GIIGGV ++ K++ + A ++ V+ N HA + S
Sbjct: 5 LGIIGGVGSEASAYLYEKILRATKAPTDQDHLNMVILN---------HAEIADRTSYI-- 53
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
LDH L Q G + I++PC+ SH ++ + + P H+ + + L
Sbjct: 54 LDHTNDNPLPYFMEDLHLLNQIGVKLILIPCNTSHFFYDEFQKVSHAPIYHLIDHTTERL 113
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
K+ +K R+G+LATD T+ + YQ+ ++Q E V+P++ +HV+ +L
Sbjct: 114 KKEGIK--------RVGILATDGTIKSQLYQKSCESQQLEWVIPNQENQQHVM-----SL 160
Query: 264 NHRDMEGAR-----NLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDAL 318
+ D++ + L+ I I+ + + V +I+ E+ +L + + L ++ +DP++
Sbjct: 161 IYDDIKAGKPIHKDKLISI-IKEMEEQQVERMILACTEL-SILKEREQLDERFVDPLEIA 218
Query: 319 ARSTVTWARSNKK 331
T+ K+
Sbjct: 219 IDYTLEMFHKQKR 231
>gi|292494120|ref|YP_003533263.1| aspartate racemase [Haloferax volcanii DS2]
gi|448289602|ref|ZP_21480772.1| aspartate racemase [Haloferax volcanii DS2]
gi|291369140|gb|ADE01370.1| aspartate racemase [Haloferax volcanii DS2]
gi|445582050|gb|ELY36396.1| aspartate racemase [Haloferax volcanii DS2]
Length = 245
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 106/243 (43%), Gaps = 43/243 (17%)
Query: 76 DSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVH 135
D++ + T+GI+GG+S ST+ + +L+ D +N+ H H
Sbjct: 5 DAVGGELRTVGILGGMSSQSTVEYY-RLI-----------------DEGIND--VHGGHH 44
Query: 136 SLKSKTVQLDHIRGAVSQNLRHKR------------AFLEQAGARCIVMPCHISHAWHGD 183
+ + +D G V + +R +R LE GA +VM + H
Sbjct: 45 AAELLIRSVDF--GTVERYIRTERWDDAADYLAAAATDLEAGGADFVVMATNTMHRVAPR 102
Query: 184 VSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFE 243
+ SIPFLH+ V LE +GVL T AT+ FY+E+ + G +
Sbjct: 103 IEAALSIPFLHI---VDAAADAILADGLET-----VGVLGTRATMDGAFYRERFEEHGID 154
Query: 244 VVLPDKATMEHVIIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP 302
V++P+++ + + E L ++ E +R+ + L+ R + +++G E++ ++
Sbjct: 155 VIVPEESRRDEIDRIVFEELTKGEIREASRDYYLKAVDQLVERGADGIVLGCTEIELLVE 214
Query: 303 KDD 305
+ D
Sbjct: 215 QAD 217
>gi|421080724|ref|ZP_15541642.1| putative aspartate racemase [Pectobacterium wasabiae CFBP 3304]
gi|401704736|gb|EJS94941.1| putative aspartate racemase [Pectobacterium wasabiae CFBP 3304]
Length = 238
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 38/252 (15%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECP--------PFVVCNDPALNEELFHASVHS 136
IG++GG+ +T++ L K+V EE P P VV N P + + A +
Sbjct: 6 IGVLGGMGPLATVDLLHKIV-------EETPASRDQDHVPVVVWNVPQIPDRQ-QALAGT 57
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
+S L + A+ Q L + IV+PC+ +H W ++E P +H+
Sbjct: 58 GESP---LPTLLSAIQQ--------LNRLSVSHIVVPCNTAHYWFDALAEASYAPLVHIA 106
Query: 197 ECVAKELK---EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATM 252
+ + E K P +IG++AT TL+AG+YQ++ Q G E V+P++ M
Sbjct: 107 DATLYAITPPAEVKKAPQ------KIGLIATHGTLNAGWYQQRFSAQLGAETVVPNEQEM 160
Query: 253 EHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP-KDDPLLKKC 311
+ +P A+ +++ LL L+ R +++ E+ L
Sbjct: 161 TTLFVPGCYAVKRGELQHGGRLLEQLAARLVDRGAERLVLACTEVPLALEVVSSRWWDIS 220
Query: 312 IDPMDALARSTV 323
IDP ALA++ V
Sbjct: 221 IDPTRALAQACV 232
>gi|378823522|ref|ZP_09846145.1| aspartate racemase [Sutterella parvirubra YIT 11816]
gi|378597646|gb|EHY30911.1| aspartate racemase [Sutterella parvirubra YIT 11816]
Length = 475
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 36/238 (15%)
Query: 123 PALNEELFHASVHSLKSKTVQLDHIRGAVSQN--------------------LRHKRAFL 162
PA +L+ V + +KT Q +HI+ V QN L L
Sbjct: 241 PAATVDLYDKIVKATPAKTDQ-EHIKLVVEQNPQTPDRTACLLGQGDDPTFALYGMAMKL 299
Query: 163 EQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVL 222
E G +++PC+ +HA+ V SIP +++ + +E+ +AKL G RIG+L
Sbjct: 300 EADGCDAVIVPCNTAHAFMPFVERHLSIPCINMQKAALEEI-QAKL-----GKDARIGLL 353
Query: 223 ATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI--IPTIEALNHRDMEGA-RNLLRIGI 279
AT T+ + Y EK + G + +PD+ + V+ I E +G R+ L G+
Sbjct: 354 ATRGTVQSRIYAEKAEAMGLPMFVPDEERQDRVMAAIYGPEGAKAGFTDGVCRDDLMSGV 413
Query: 280 QLLL-VRAVNAVIIGSDEMQGVLPKDD--PLLKKC---IDPMDALARSTVTWARSNKK 331
+ L+ N +I+G E+ +L + D P+ K IDP ALAR V A K
Sbjct: 414 EYLVRTYDCNCLILGCTELPLILDESDAFPVAGKSVMMIDPTAALARKVVKIALEKNK 471
>gi|134101592|ref|YP_001107253.1| aspartate racemase [Saccharopolyspora erythraea NRRL 2338]
gi|291009953|ref|ZP_06567926.1| aspartate racemase [Saccharopolyspora erythraea NRRL 2338]
gi|133914215|emb|CAM04328.1| aspartate racemase [Saccharopolyspora erythraea NRRL 2338]
Length = 251
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 36/266 (13%)
Query: 72 SKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELF 130
S++ D TIG++GG+ ++T +F KL+ + A +E ++ +DP
Sbjct: 11 SRAADYPGALGPTIGVLGGMGPAATADFYAKLIRATPATTDQEHLRVIIWSDP------- 63
Query: 131 HASVHSLKSKTVQLDHIRGAVSQN--LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGC 188
+ +T L + G L + L GA I +PC+ +HA+ V E
Sbjct: 64 -----TTPDRTRAL--LEGGTDPTPWLVYGARVLAAGGADVIAVPCNTAHAFLPAVVERV 116
Query: 189 SIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
+P +H+ E ++ L A L+P ++G+LAT T+ A Y+ L G +++PD
Sbjct: 117 GVPLVHMIEQTSRHL--AALRPPVR----KVGLLATTGTVRARLYETWLATAGIALLVPD 170
Query: 249 KATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM-----QGVLPK 303
+ ++ I ++ + R LL + L+ R A+I G E+ G LP
Sbjct: 171 STSQAEEVMAAIRSIKAGKDD--RGLLARAARRLVDRDARAIIAGCTEIPLGLETGQLP- 227
Query: 304 DDPLLKKCIDPMDALARSTVTWARSN 329
+DP LA + + AR
Sbjct: 228 -----VPVVDPTQVLAEAVIAHARGG 248
>gi|169825878|ref|YP_001696036.1| aspartate racemase [Lysinibacillus sphaericus C3-41]
gi|168990366|gb|ACA37906.1| Aspartate racemase [Lysinibacillus sphaericus C3-41]
Length = 233
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 22/178 (12%)
Query: 81 QANTIGIIGGVSVSSTLNFLGKLVW--YSAKDAEECPPFVVCNDPALNEELFHASVHSLK 138
+ T+GIIGGV +T+ F+G+++ A+ +E ++ ND + +
Sbjct: 2 KKQTLGIIGGVGPLATM-FIGEMIVRRTKAQKDQEHLHTIIDNDTNIPDR---------- 50
Query: 139 SKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
LD+ + + L GA I +PC+ +H ++ ++ G IP LH+
Sbjct: 51 -TAFILDNTKENPVPVIMEDAKKLASVGADMIAIPCNTAHTFYDEIQAGSPIPVLHM--- 106
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
++E + E G+ R+G+LAT TL++ YQE L+ G V+PD HV+
Sbjct: 107 ----IRETAKRASELGAE-RVGILATTGTLTSRMYQEALEEYGITPVVPDNEMRAHVM 159
>gi|187919407|ref|YP_001888438.1| aspartate racemase [Burkholderia phytofirmans PsJN]
gi|187717845|gb|ACD19068.1| aspartate racemase [Burkholderia phytofirmans PsJN]
Length = 233
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 112/247 (45%), Gaps = 31/247 (12%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IGI+GG+ +T++F+ K+V + A ++ P +V N P + + +S+ +
Sbjct: 4 IGILGGMGPLATVDFMAKVVQLTDASCDQQHLPMLVANLPHIPD----------RSRAIL 53
Query: 144 LD--HIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE-CVA 200
D G + + + L + G I +PC+ +H W+ ++ + P LH+ E CVA
Sbjct: 54 GDGEDCLGPLLEGID----LLNRNGVGLIAIPCNSAHHWYAQIAARSAAPVLHIAEACVA 109
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
A+ R+ VL T TL +GFYQ L + E ++P A ++ I I
Sbjct: 110 AVPASAR----------RVAVLGTGGTLKSGFYQAALSARDIEPLVP-GADLQQSIATCI 158
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQ-GVLPKDDPLLKKCIDPMDALA 319
+ +E A L + L + V A ++ E+ +P L ID LA
Sbjct: 159 REVKAGALEQAAGHLSTVLGALAAQDVRAAVMACTEIPVAARHLSNPPL-TLIDSSLELA 217
Query: 320 RSTVTWA 326
R+TVT+A
Sbjct: 218 RATVTFA 224
>gi|317121724|ref|YP_004101727.1| aspartate racemase [Thermaerobacter marianensis DSM 12885]
gi|315591704|gb|ADU51000.1| aspartate racemase [Thermaerobacter marianensis DSM 12885]
Length = 296
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 18/245 (7%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
IGI+GG+ +T++ K+V + A+ ++ ++ N+P + + +
Sbjct: 54 AIGILGGMGPEATVDLFAKIVRATPARVDQDHVRVIIDNNPKIPDRTAYLRGCGPDPVPA 113
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
+ IRG VS GA I++PC+ +H + + +P LH+ VA+
Sbjct: 114 MVAGIRGLVSL------------GATLILIPCNTAHVYFDRLQAESPVPILHIMREVARA 161
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI--IPTI 260
L +G +G+LAT+ T+++G Y L G +V++P+ A V I
Sbjct: 162 LAPGGDPAAGLAAGGPVGLLATELTVASGLYHRALAEVGLQVLVPEPAYQAQVTRAIFGP 221
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL-PKDDPLLKKCIDPMDALA 319
+ + AR L L+ R +I G E+ VL P D P+ +DP + LA
Sbjct: 222 DGIKAGVYGPARQRLLEAGAHLVERGARVLIAGCTELPLVLRPGDFPV--PWVDPAEILA 279
Query: 320 RSTVT 324
R+ +
Sbjct: 280 RAALA 284
>gi|52142858|ref|YP_083972.1| aspartate racemase [Bacillus cereus E33L]
gi|51976327|gb|AAU17877.1| aspartate racemase [Bacillus cereus E33L]
Length = 226
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT---MEHVII 257
E +K RIG+L T T+ FY+ +L N E ++P++ + HVI+
Sbjct: 112 EQDIK--------RIGLLGTKQTMEQDFYKSRLANYNIETIIPNEEERNFIHHVIL 159
>gi|399002018|ref|ZP_10704715.1| aspartate racemase [Pseudomonas sp. GM18]
gi|398125925|gb|EJM15384.1| aspartate racemase [Pseudomonas sp. GM18]
Length = 499
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 27/256 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GI+GGV ++T++F+GK+V ++ A +E VV +P + + ++ ++
Sbjct: 254 LGIVGGVGPAATVDFMGKVVAHTPAGRDQEHIKMVVEQNPQIPD----------RTASLL 303
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
D ++ KR LE AGA I +PC+ +HA+ + +P +++ E
Sbjct: 304 YDETDPTMAMYATCKR--LESAGANAIAIPCNTAHAFVERIQAHLRVPIVNM----LAET 357
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
EA ++ G+G +G+LAT T+ + Y E + G ++ P V+ AL
Sbjct: 358 VEAIVQ--RYGAGKTVGLLATSGTIKSQVYHEAARRAGLHIIAPGVDYQALVMDAIYGAL 415
Query: 264 NHRD--MEG-ARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK-----CIDPM 315
+ EG ++ L I + L + +I+G E+ VL + + K IDP
Sbjct: 416 GIKAGFTEGLCKDQLLIAAEHLCELGADVLILGCTELPLVLQHSEAFMIKGHQVALIDPT 475
Query: 316 DALARSTVTWARSNKK 331
LA + AR + +
Sbjct: 476 TILAMKCIQLAREHSR 491
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 67/168 (39%), Gaps = 27/168 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
+GI+GG+ + + KLV A V D LF H K + L
Sbjct: 17 LGIVGGLGSLAGGDLFYKLVKSRA----------VLEDQGRYHFLFEQ--HPFKDVLMPL 64
Query: 145 DHIRGAVSQNLRHKRAF-----LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
D RGA S R F E +G IV+PC SH + ++ E IP L + +
Sbjct: 65 D--RGA-SMTSRKFYVFEVCQTFEASGVDAIVLPCFASHTFREEIQEEIGIPVLDMMAAL 121
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ + A G +G+LA+D G + E+ F++V P
Sbjct: 122 RRHIDHV------AEPGSALGILASDYVRHCGLF-ERYFGSDFKLVYP 162
>gi|423482465|ref|ZP_17459155.1| aspartate racemase [Bacillus cereus BAG6X1-2]
gi|401143769|gb|EJQ51303.1| aspartate racemase [Bacillus cereus BAG6X1-2]
Length = 234
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
DH V L +E +GA C++M + H + +V + SIP LH+G+ A+ +
Sbjct: 53 DHQYEQVKNELVTVAKKVENSGAECLLMCSNTIHLFAEEVEKAISIPLLHIGDVSAETMI 112
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPTIE 261
E +K RIG+L T T+ FY+ +L N E ++P D+ + HVI+ +
Sbjct: 113 EYNIK--------RIGLLGTKQTMEQDFYKSRLANYNIESIIPNEEDRTFIHHVILQELS 164
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARS 321
++ + LL+I L+ +++G E+ ++ + D L D A +
Sbjct: 165 RGIISEISKEK-LLQI-TNTLIKNGAEGILLGCTEIPLLISQSD-LSVPVFDTAYTHANT 221
Query: 322 TVTWARSNKKLTL 334
V +A +N K+ L
Sbjct: 222 AVRFANNNLKVKL 234
>gi|228958869|ref|ZP_04120575.1| Aspartate racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|229110094|ref|ZP_04239670.1| Aspartate racemase [Bacillus cereus Rock1-15]
gi|229148078|ref|ZP_04276413.1| Aspartate racemase [Bacillus cereus BDRD-ST24]
gi|296503209|ref|YP_003664909.1| aspartate racemase [Bacillus thuringiensis BMB171]
gi|423586946|ref|ZP_17563033.1| aspartate racemase [Bacillus cereus VD045]
gi|423627712|ref|ZP_17603461.1| aspartate racemase [Bacillus cereus VD154]
gi|423642353|ref|ZP_17617971.1| aspartate racemase [Bacillus cereus VD166]
gi|423648523|ref|ZP_17624093.1| aspartate racemase [Bacillus cereus VD169]
gi|228635383|gb|EEK91878.1| Aspartate racemase [Bacillus cereus BDRD-ST24]
gi|228673286|gb|EEL28554.1| Aspartate racemase [Bacillus cereus Rock1-15]
gi|228800806|gb|EEM47717.1| Aspartate racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|296324261|gb|ADH07189.1| aspartate racemase [Bacillus thuringiensis BMB171]
gi|401229098|gb|EJR35614.1| aspartate racemase [Bacillus cereus VD045]
gi|401271009|gb|EJR77027.1| aspartate racemase [Bacillus cereus VD154]
gi|401277296|gb|EJR83240.1| aspartate racemase [Bacillus cereus VD166]
gi|401284021|gb|EJR89887.1| aspartate racemase [Bacillus cereus VD169]
Length = 226
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLILYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY+ +L E ++P ++ + HVI+
Sbjct: 112 EQNIK--------RIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVIL 159
>gi|89098523|ref|ZP_01171406.1| aspartate racemase [Bacillus sp. NRRL B-14911]
gi|89086768|gb|EAR65886.1| aspartate racemase [Bacillus sp. NRRL B-14911]
Length = 237
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 103/236 (43%), Gaps = 39/236 (16%)
Query: 81 QANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
+ TIG+IGG+S ST V+YS + + E+L +HS +
Sbjct: 3 EMKTIGLIGGMSWESTS------VYYSY------------INRLVQEKL--GGIHSARCL 42
Query: 141 TVQLDHIRGAV----------SQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSI 190
D A ++ + FLE GA CIV+ + H D+ + C I
Sbjct: 43 LYSFDFEEIAALQRSGNWEKATEKMIEAARFLETGGADCIVICTNTMHLMAEDLQKACRI 102
Query: 191 PFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
P +H+ ECV +E+K+ ++ +G+L T T+ FY++ L+ G +V++P++
Sbjct: 103 PVIHIVECVVEEIKKQGIEA--------VGLLGTKFTMEQTFYKKILEEHGIKVLVPEEG 154
Query: 251 TMEHVIIPTIEAL-NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
E V E L + E ++ I L + +I+G E+ ++ ++D
Sbjct: 155 DRERVHEVIFEELCRGKFKEDSKAAYLDIIHRLEKKGAQGIILGCTEIPLLISQED 210
>gi|254362280|ref|ZP_04978393.1| aspartate racemase [Mannheimia haemolytica PHL213]
gi|261492806|ref|ZP_05989353.1| aspartate racemase [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261494828|ref|ZP_05991306.1| aspartate racemase [Mannheimia haemolytica serotype A2 str. OVINE]
gi|452746021|ref|ZP_21945853.1| RacX protein [Mannheimia haemolytica serotype 6 str. H23]
gi|153093857|gb|EDN74789.1| aspartate racemase [Mannheimia haemolytica PHL213]
gi|261309539|gb|EEY10764.1| aspartate racemase [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261311488|gb|EEY12644.1| aspartate racemase [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|452086160|gb|EME02551.1| RacX protein [Mannheimia haemolytica serotype 6 str. H23]
Length = 229
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 108/235 (45%), Gaps = 38/235 (16%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
T+GI+GG+S ST+++ + + ++N+ L S + +V
Sbjct: 3 TLGILGGMSAESTVSYYLDI------------------NRSVNKVLGGNSSAKILISSVN 44
Query: 144 LDHI-----RG---AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ I +G A ++ L + LEQAGA I++ + H +S S+PFLH+
Sbjct: 45 FEEIVQCQKQGNWQAAAEILSEQARLLEQAGAEGILLATNTMHKIADQISSHISVPFLHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+CVA+ + L+ ++ +L T T+S FY++ L +G ++PD+ T + +
Sbjct: 105 LDCVAEAISAQGLQ--------KVALLGTKFTMSDNFYKDGLLERGITSIVPDEETQQEI 156
Query: 256 IIPTIEALN-HRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL--PKDDPL 307
E L + E A+ IQ L + VI+G E+ G+L D+PL
Sbjct: 157 HRIIFEELCLGKITESAKAFYLQTIQQLSEQGAEGVILGCTEI-GLLINQNDNPL 210
>gi|374308015|ref|YP_005054446.1| aspartate racemase [Filifactor alocis ATCC 35896]
gi|291165619|gb|EFE27668.1| aspartate racemase [Filifactor alocis ATCC 35896]
Length = 233
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 87/173 (50%), Gaps = 20/173 (11%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSL 137
+ +G+IGG+ +T++F K+V ++ A +E P ++ N + + + + L
Sbjct: 1 MKHKKKMGVIGGMGPLATMDFATKVVRFTEASCDQEHIPMIIDNRIQIPDR----TNYIL 56
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
L + + + FLE++GA +VMPC+ +H ++ ++ + IPFLH+ E
Sbjct: 57 NGTNSPLSELIASAT--------FLEESGAEFLVMPCNTAHYFYDEIKKHIHIPFLHIVE 108
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDK 249
KE+ + K + ++ +++T T S G YQ+ Q +++LPD+
Sbjct: 109 ETTKEILKHK------DTVHKVALISTTGTYSCGLYQDAFAKQKDVDLLLPDE 155
>gi|253687565|ref|YP_003016755.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251754143|gb|ACT12219.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 235
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 93 VSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASV--HSLKSKTVQLDHIR 148
VS TL +G + W S P + + N+ + L A + HS+ ++ +
Sbjct: 2 VSKTLGLIGGMSWEST-----IPYYRIINEYVKGQLGGLHSAKIILHSVDFHEIERLQAQ 56
Query: 149 GAVSQN---LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKE 205
G Q+ L + L QAGA IV+ + H DV C +P LH+ + LK+
Sbjct: 57 GDWEQSAAVLGNIAVGLRQAGADAIVICTNTMHKVADDVERACQLPLLHIADATGASLKQ 116
Query: 206 AKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPD---KATMEHVIIPTIE 261
LK ++G+L T T+ FY++++Q + G EVV+PD K + +I +
Sbjct: 117 HGLK--------KVGLLGTRYTMEQDFYRQRIQERFGVEVVVPDHEGKEIVNRIIYDELC 168
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
N D+ +R R IQ L + +I+G E+
Sbjct: 169 LGNINDV--SRQAYRDIIQQLEQQGAEGIILGCTEI 202
>gi|445419274|ref|ZP_21435154.1| aspartate racemase [Acinetobacter sp. WC-743]
gi|444759940|gb|ELW84400.1| aspartate racemase [Acinetobacter sp. WC-743]
Length = 263
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 113/259 (43%), Gaps = 42/259 (16%)
Query: 82 ANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
TIG++GG+S ST + +L + ++ ++L +HS K
Sbjct: 35 VKTIGLLGGMSWESTDLYYQQL------------------NKSVQQKL--GKLHSAKVVL 74
Query: 142 VQLDHIRGAVSQN----------LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
+ +D + Q L+ K LEQAGA I++ + H + SIP
Sbjct: 75 ISVDFAEIEILQRQGLWEDAGIYLKEKAVQLEQAGAEGILLCTNTMHKVASYIEHSISIP 134
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA- 250
F+H+ + AKE+ ++ ++G+L T T+ FY+++L+ QG V++P +A
Sbjct: 135 FIHIADATAKEILNQNIR--------KVGLLGTRFTMEQDFYKQRLEQQGINVLIPHQAH 186
Query: 251 -TMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK 309
+ H II L + + + ++I QL+L +I+G E+ +L D P
Sbjct: 187 RKIVHNIIYDELCLGVINEQSRQKYIQIVEQLIL-EGAEGIILGCTEI-CMLIGDTPFSV 244
Query: 310 KCIDPMDALARSTVTWARS 328
D ++ V +A S
Sbjct: 245 PLFDTTSIHTQAAVDFALS 263
>gi|212223817|ref|YP_002307053.1| aspartate racemase [Thermococcus onnurineus NA1]
gi|212008774|gb|ACJ16156.1| aspartate racemase [Thermococcus onnurineus NA1]
Length = 229
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 23/245 (9%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
IGI+GG+ +T +++ + AK ++ P ++ N+P + + +
Sbjct: 4 RVIGILGGMGPLATAELFRRIIEKTPAKRDQDHPRIIIYNNPKIPDRTAFILGEGEDPRP 63
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
++ R LE GA I+MPC+ +H + + SIP + + E AK
Sbjct: 64 ELVESARK------------LESWGADFIIMPCNTAHFFAESIQRKISIPLVSMVEETAK 111
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
++E LK ++G+LATD T+ Y L ++G ++ +P K E V+ E
Sbjct: 112 RIEEMGLK--------KVGLLATDGTIKGLVYHRALLDRGIQIAVPIKKDQELVMKGIYE 163
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARS 321
+ ++E R LL + L R+ +I G E+ L +D L IDP+D +A
Sbjct: 164 GVKAGNLELGRELLLRVARRLEKRS-EGIIAGCTEVSVALKPED-LSVPLIDPLDVIAEM 221
Query: 322 TVTWA 326
V A
Sbjct: 222 AVRLA 226
>gi|228994390|ref|ZP_04154269.1| Aspartate racemase [Bacillus pseudomycoides DSM 12442]
gi|228765351|gb|EEM14026.1| Aspartate racemase [Bacillus pseudomycoides DSM 12442]
Length = 226
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
+E +GA CI+M + H + +V + SIP LH+G+ A+E+ E +K RIG+
Sbjct: 69 IECSGADCILMCSNTVHQFAEEVEQAISIPLLHIGDVSAEEIVEHDVK--------RIGL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKAT---MEHVIIPTIEALNHRDMEGARNLLRIG 278
L T T+ FY+ +L N G E ++P K + HVI+ + R L+I
Sbjct: 121 LGTKQTMEQDFYKTRLANYGVETIIPKKDERNFIHHVILQELSKGIISQQSKVR-FLQI- 178
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKDD 305
IQ L+ +++G E+ ++ + D
Sbjct: 179 IQKLIENGAEGILLGCTEIPLLISQKD 205
>gi|431792245|ref|YP_007219150.1| aspartate racemase [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430782471|gb|AGA67754.1| aspartate racemase [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 236
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 29/246 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAE-ECPPFVVCNDPALNEEL-FHASVHSLKSKTV 142
IGIIGG+ +T++ K+V + E E +V N+P + + L F K +
Sbjct: 5 IGIIGGMGPLATVDIFHKIVSMTEATIEQEHIHIIVDNNPGIPDRLNFLLRDGESPEKAL 64
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
IR L+ GA ++MPCH +H ++ DV + I F+++ + AKE
Sbjct: 65 VQSAIR-------------LQCMGAAVLIMPCHTAHYFYDDVKKYVDIDFINMVDETAKE 111
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
+ +A + RIG+LAT T +AG Y + G EVV P+ + + I A
Sbjct: 112 VVKA------LPTCKRIGLLATKGTYNAGVYDKIFAPYGIEVVKPNFEG-QQALADLILA 164
Query: 263 LNH-RDMEGARNLLRIGIQLLLVRAVNA--VIIGSDEMQGVLPKDDPLLKKCIDPMDALA 319
+ H + N+ R+ QL + NA ++G E+ K + + + IDP LA
Sbjct: 165 VKHGQPTFDLTNIYRVLDQL---KDKNAEITVLGCTELPIAFAKFN-IKENYIDPTTVLA 220
Query: 320 RSTVTW 325
R+ + +
Sbjct: 221 RTAIRY 226
>gi|251797252|ref|YP_003011983.1| aspartate racemase [Paenibacillus sp. JDR-2]
gi|247544878|gb|ACT01897.1| aspartate racemase [Paenibacillus sp. JDR-2]
Length = 251
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 117/263 (44%), Gaps = 25/263 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
+G+IGG +T F +++ ++ +A++ ++ L HAS+ S ++
Sbjct: 10 LGVIGGTGPKATSVFFDRVIAFTEAEADQDHIDMII--------LNHASLPDRTSSILER 61
Query: 145 DHIRGAVSQNLRHKRA---FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH-VGECVA 200
Q LR +A LE A IVMPC+ +H + D+ +IP ++ V E V
Sbjct: 62 KD-----QQFLRLIQADIALLEHAEVSNIVMPCNTAHRFFDDIQAMTAIPIVNMVRETVE 116
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+ L + K + +IG+LATDAT+ Y + L+ G E +P + + ++
Sbjct: 117 ELLAKHK-------ANRKIGILATDATIQTDIYSDVLRQYGLEPFIPSPSMQQSIMSIIY 169
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALAR 320
E + +R L I ++L + V++ E+ + + + ID +D L
Sbjct: 170 EDIKKTGHSDSRVLEGIMTEMLQREKCDGVVLACTEL-SCIELGESVRPYYIDALDVLVN 228
Query: 321 STVTWARSNKKLTLLLDSQSSAK 343
++T + K +L + + S K
Sbjct: 229 RSITLSGGTIKPSLKIKPRQSRK 251
>gi|402554137|ref|YP_006595408.1| aspartate racemase [Bacillus cereus FRI-35]
gi|401795347|gb|AFQ09206.1| aspartate racemase [Bacillus cereus FRI-35]
Length = 234
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 111/254 (43%), Gaps = 36/254 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
+GIIGG+ +T++ + K++ Y+ PA+ ++ +H + Q+
Sbjct: 5 VGIIGGMGPLATVDLMNKIISYT---------------PAMKDQ---EHIHIIADNYSQI 46
Query: 145 DHIRGAV-------SQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
A+ + + L+ AGA +V+ C+ +H ++ V +IP LH+
Sbjct: 47 PDRTTAILGKGIDPTPYIVQSAQRLQNAGADFLVIACNTAHFFYKAVKRSVNIPILHMPL 106
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
A+ ++E + ++G+LATD T+ YQ Q+ +V+ PDK M+ ++
Sbjct: 107 ETARFVQENNFR--------KVGLLATDGTVKTELYQNSCQDYRIDVIDPDKE-MQKKVM 157
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I A+ D++ L + L A+I G E+ VL + IDP +
Sbjct: 158 EGIYAIKSGDLKTGCLHLSMVADKLKESGAEAIIAGCTEVPLVLKSSKNIC--VIDPTEI 215
Query: 318 LARSTVTWARSNKK 331
+A+ + A +K
Sbjct: 216 VAKVVIKIANKTEK 229
>gi|327401693|ref|YP_004342532.1| aspartate racemase [Archaeoglobus veneficus SNP6]
gi|327317201|gb|AEA47817.1| aspartate racemase [Archaeoglobus veneficus SNP6]
Length = 229
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 20/178 (11%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S STL + +++ + K+ C +++ E H K K
Sbjct: 2 KTIGLIGGMSWESTLEYY-RIINETVKEKLGGLHSAKCIIYSVDFEEIEKLQHEGKWK-- 58
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
+L + +Q L E+AGA +++ + H +V EG SIP LH+ + A++
Sbjct: 59 ELTEVMIDAAQRL-------EKAGADFVIICTNTMHKVAEEVQEGISIPLLHIADVTAEK 111
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
+KE L+ +G+L T T+ FY++KL G EV++P++ E V++ ++
Sbjct: 112 IKEKGLR--------NVGLLGTKFTMEEDFYKKKLGESGIEVIIPEED--ERVVVHSV 159
>gi|423402731|ref|ZP_17379904.1| aspartate racemase [Bacillus cereus BAG2X1-2]
gi|423476639|ref|ZP_17453354.1| aspartate racemase [Bacillus cereus BAG6X1-1]
gi|401650323|gb|EJS67895.1| aspartate racemase [Bacillus cereus BAG2X1-2]
gi|402432946|gb|EJV65001.1| aspartate racemase [Bacillus cereus BAG6X1-1]
Length = 226
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGADCLLMCSNTVHLFAEEVENAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT---MEHVII 257
E +K RIG+L T T+ FY+ +L N E ++P++ + HVI+
Sbjct: 112 EQNIK--------RIGLLGTKQTMEQDFYKSRLTNFNIETIIPNEEERNFIHHVIL 159
>gi|228921319|ref|ZP_04084644.1| Aspartate racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228838333|gb|EEM83649.1| Aspartate racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 226
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY+ +L E ++P ++ + HVI+
Sbjct: 112 EQNIK--------RIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVIL 159
>gi|299535194|ref|ZP_07048518.1| aspartate racemase [Lysinibacillus fusiformis ZC1]
gi|424737793|ref|ZP_18166241.1| aspartate racemase [Lysinibacillus fusiformis ZB2]
gi|298729315|gb|EFI69866.1| aspartate racemase [Lysinibacillus fusiformis ZC1]
gi|422948267|gb|EKU42651.1| aspartate racemase [Lysinibacillus fusiformis ZB2]
Length = 233
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 85/178 (47%), Gaps = 22/178 (12%)
Query: 81 QANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPF--VVCNDPALNEELFHASVHSLK 138
+ T+GIIGGV +T+ F+G+++ K ++ ++ ND + + +
Sbjct: 2 KKQTLGIIGGVGPLATM-FIGEMIVRRTKAQKDQDHLHTIIDNDTNIPDRTAYI------ 54
Query: 139 SKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
LD+ + + L GA I +PC+ +H ++ ++ EG IP LH+
Sbjct: 55 -----LDNTKENPVPVIIEDAKKLASVGAHIIAIPCNTAHTFYQEIEEGSPIPVLHM--- 106
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
++E + + G+ R+G+LAT TL++ YQE L+ G V+PD +V+
Sbjct: 107 ----IRETAKRAADLGAK-RVGILATTGTLTSRMYQEALEQFGITPVVPDNEMRSYVM 159
>gi|223477013|ref|YP_002581419.1| aspartate racemase [Thermococcus sp. AM4]
gi|214032239|gb|EEB73069.1| aspartate racemase [Thermococcus sp. AM4]
Length = 226
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 95/231 (41%), Gaps = 35/231 (15%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG + ST + + S E+ PF + L ++
Sbjct: 4 IGLIGGTTPESTCYYYRNYIRLSR---EKFGPF---------------TFPELIVYSINF 45
Query: 145 DHIRGAVSQNLRHKRAF------LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
D A KR LE+AGA I + + H DV S+P + + +
Sbjct: 46 DEFLNAPDGWEGRKRILINAARALERAGAEVIALTANTPHIVFPDVQRAVSVPMVSIIDA 105
Query: 199 VAKELKEAKLKPLEAGSGVR-IGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ +E+K GVR + +L T T++A FY+E L GFEVV+P+ +E V
Sbjct: 106 LIEEMKR---------RGVRKVLLLGTKTTMTADFYREALLKAGFEVVVPEGDEIEEVNR 156
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQ-GVLPKDDPL 307
E L D+ LL + + R + VI+G E+ + P D P+
Sbjct: 157 IIFEELAFEDLRSKPYLLSLVERYREERGIEGVILGCTELPLAIRPGDVPV 207
>gi|206972488|ref|ZP_03233433.1| aspartate racemase family protein [Bacillus cereus AH1134]
gi|229178917|ref|ZP_04306276.1| Aspartate racemase [Bacillus cereus 172560W]
gi|423413595|ref|ZP_17390715.1| aspartate racemase [Bacillus cereus BAG3O-2]
gi|423430620|ref|ZP_17407624.1| aspartate racemase [Bacillus cereus BAG4O-1]
gi|423580919|ref|ZP_17557030.1| aspartate racemase [Bacillus cereus VD014]
gi|423636651|ref|ZP_17612304.1| aspartate racemase [Bacillus cereus VD156]
gi|206732648|gb|EDZ49825.1| aspartate racemase family protein [Bacillus cereus AH1134]
gi|228604570|gb|EEK62032.1| Aspartate racemase [Bacillus cereus 172560W]
gi|401100322|gb|EJQ08317.1| aspartate racemase [Bacillus cereus BAG3O-2]
gi|401119243|gb|EJQ27066.1| aspartate racemase [Bacillus cereus BAG4O-1]
gi|401215684|gb|EJR22399.1| aspartate racemase [Bacillus cereus VD014]
gi|401274479|gb|EJR80451.1| aspartate racemase [Bacillus cereus VD156]
Length = 226
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY+ +L E ++P ++ + HVI+
Sbjct: 112 EQNIK--------RIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVIL 159
>gi|115352231|ref|YP_774070.1| aspartate racemase [Burkholderia ambifaria AMMD]
gi|115282219|gb|ABI87736.1| aspartate racemase [Burkholderia ambifaria AMMD]
Length = 230
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 109/256 (42%), Gaps = 41/256 (16%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + + + N + + H H+ KS V
Sbjct: 2 KTIGLIGGMSWESSAEY-----------------YRMINR---HSKALHGGHHNAKSVLV 41
Query: 143 QLDHIR----------GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+D A+ + + LE AGA +V+ + H +G + ++PF
Sbjct: 42 TVDFAEIEALQRAQDWVALGERMADAARQLEAAGADLVVLTTNTMHRVYGAIEAAVALPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKAT 251
LH+ + L+ A ++ R+ +L T T+ FY E+L+++ G +V++PD+A
Sbjct: 102 LHIADPTGAALRAAGVE--------RVALLGTRYTMELPFYAERLRDKFGLDVLVPDEAA 153
Query: 252 MEHVIIPTIEALNHRDMEGARNLLRIG-IQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK 310
V + L H ++ A + I L R AVI+G E+ ++ DD L
Sbjct: 154 RGDVHRIIYDELCHGVIDAASRATYVAIIDELAKRGAQAVILGCTEITLLIGADDSPL-P 212
Query: 311 CIDPMDALARSTVTWA 326
D A++ V WA
Sbjct: 213 VFDTTALHAKAAVEWA 228
>gi|228908369|ref|ZP_04072213.1| Aspartate racemase [Bacillus thuringiensis IBL 200]
gi|228851277|gb|EEM96087.1| Aspartate racemase [Bacillus thuringiensis IBL 200]
Length = 226
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY+ +L E ++P ++ + HVI+
Sbjct: 112 EQNIK--------RIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVIL 159
>gi|340759522|ref|ZP_08696091.1| aspartate racemase [Fusobacterium varium ATCC 27725]
gi|251835644|gb|EES64183.1| aspartate racemase [Fusobacterium varium ATCC 27725]
Length = 230
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 59/244 (24%)
Query: 84 TIGIIGGVSVSSTLNFL----------------GKLVWYSA--KDAEECPPFVVCNDPAL 125
TIG+IGG+S ST+ + GK+V +S ++ EEC
Sbjct: 3 TIGLIGGMSWESTVTYYEIINRTIKEKLGGLHSGKIVLFSVDFQEIEECQA--------- 53
Query: 126 NEELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVS 185
K + + I +QN LE+AGA IV+ + H D+
Sbjct: 54 ------------KGEWDKSAEILTEAAQN-------LEKAGADFIVICTNTMHKIAPDIQ 94
Query: 186 EGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVV 245
E SIP LH+ E A EL + +K ++ +L T T+ FY+ KL ++G EV+
Sbjct: 95 EKISIPILHIAEATADELDKKNIK--------KVALLGTKYTMEQDFYKNKLVDRGIEVI 146
Query: 246 LP---DKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP 302
+P D+A + VI + L + + + L I ++ L+ VI+G E+ ++
Sbjct: 147 VPDAEDRAEVNRVIYEEL-CLGNIVADSKKRFLDI-MKSLVKEGAQGVILGCTEIGLLVQ 204
Query: 303 KDDP 306
+ D
Sbjct: 205 QKDT 208
>gi|240103413|ref|YP_002959722.1| aspartate racemase [Thermococcus gammatolerans EJ3]
gi|239910967|gb|ACS33858.1| Aspartate racemase (racD) [Thermococcus gammatolerans EJ3]
Length = 226
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 10/145 (6%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVR-IG 220
LE+AGA I + + H DV + S+P + + + + +E+K GVR +
Sbjct: 69 LERAGAEIIALTANTPHIVFPDVQKAVSVPMVSIIDALIEEMKR---------RGVRKVL 119
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQ 280
+L T T++AGFY++ L GFE V+P + +E V E L + + LL + +
Sbjct: 120 LLGTKTTMTAGFYKDALNRAGFEAVVPGREEIEEVNRIIFEELAFENFKNKPYLLSLVEK 179
Query: 281 LLLVRAVNAVIIGSDEMQGVLPKDD 305
R + VI+G E+ + DD
Sbjct: 180 YRKERGIEGVILGCTELPLAIRPDD 204
>gi|407710361|ref|YP_006794225.1| aspartate racemase [Burkholderia phenoliruptrix BR3459a]
gi|407239044|gb|AFT89242.1| aspartate racemase [Burkholderia phenoliruptrix BR3459a]
Length = 483
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 124/256 (48%), Gaps = 27/256 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G++GGV ++T++FL K+V + A+ ++ +V +P + + +++ +
Sbjct: 244 LGVVGGVGPAATVDFLDKIVRNTPARRDQDHVKLLVEQNPQIPD----------RTENLI 293
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
+ VS KR LE+ GA I +PC+ +HA+ + +P +++ + +
Sbjct: 294 GEGADPTVSLYATCKR--LEEGGADIIAIPCNTAHAFVERIQPYLRVPIVNMLTETVRYV 351
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI--IPTIE 261
E P + +IGVLAT T+++G Y++ L+ QG + + P+ A V+ I +
Sbjct: 352 HEHY--PAQR----KIGVLATSGTMASGVYEKALEAQGLQQIAPEPALQSRVMQAIYGKQ 405
Query: 262 ALNHRDMEGA-RNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-----KCIDPM 315
+ GA + + ++ L+ V +++G E+ +LP + + IDP
Sbjct: 406 GVKAGFTAGACHDDIAAAVEGLIDEGVEVIVLGCTELPLLLPHAEFVGSGGARVTLIDPT 465
Query: 316 DALARSTVTWARSNKK 331
D LAR + +A + ++
Sbjct: 466 DVLARRCIAYALAARE 481
>gi|218234088|ref|YP_002367372.1| aspartate racemase [Bacillus cereus B4264]
gi|218162045|gb|ACK62037.1| aspartate racemase family protein [Bacillus cereus B4264]
Length = 226
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
+E++GA C++M + H + +V + SIP LH+G+ AKE+ E +K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
L T T+ FY+ +L E ++P ++ + HVI+
Sbjct: 121 LGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVIL 159
>gi|229173304|ref|ZP_04300848.1| Aspartate racemase [Bacillus cereus MM3]
gi|228609998|gb|EEK67276.1| Aspartate racemase [Bacillus cereus MM3]
Length = 226
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGADCLLMCSNTIHLFAEEVENAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY+ +L N E ++P ++ + HVI+
Sbjct: 112 EQNIK--------RIGLLGTKQTMEQDFYKSRLANFNIETIIPTEEERNFIHHVIL 159
>gi|448579118|ref|ZP_21644395.1| aspartate racemase [Haloferax larsenii JCM 13917]
gi|445723797|gb|ELZ75433.1| aspartate racemase [Haloferax larsenii JCM 13917]
Length = 248
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 35/235 (14%)
Query: 80 NQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
++ TIGI+GG+S ST+ + +L+ D A+NE +
Sbjct: 11 DEPRTIGILGGMSGKSTVEYY-RLI-----------------DDAVNERYGGHHAGDILI 52
Query: 140 KTVQLDHIRGAVSQN--------LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
++V I G ++ L LE GA ++M + H D+++ SIP
Sbjct: 53 RSVNFADIEGFIASEQWGEAGSYLADAAQDLEAGGADFVIMATNTMHKVAPDITDALSIP 112
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
F+H+ + A + +A + +GVL T T+ FY+E+ G ++V+PD+A
Sbjct: 113 FVHIVDAAADAILDAGIDT--------VGVLGTSVTMEDAFYRERFAQHGIDIVVPDEAD 164
Query: 252 MEHVIIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
E V E L ++ + +R+ + L+ + V++G E++ ++ + D
Sbjct: 165 REDVDRIVFEELTKGEIRDASRDRYLEVVDDLVEQGAEGVVLGCTEIEQLIDQAD 219
>gi|450072328|ref|ZP_21848549.1| putative amino acid recemase [Streptococcus mutans M2A]
gi|449211358|gb|EMC11763.1| putative amino acid recemase [Streptococcus mutans M2A]
Length = 233
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 32/184 (17%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASVHS 136
+N TIG+IGG+S ST ++ + + N+ E EL A +
Sbjct: 1 MNTMKTIGLIGGMSWESTTSY-----------------YQLINETIKKELGELHSAKILL 43
Query: 137 LKSKTVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
+++H + + ++ L LEQAGA IV+ + H + + +IP
Sbjct: 44 YSVDFAEIEHYQASGDWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIP 103
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ + A+ L E ++ ++G+L T T++ FY+EKL G EV++PD+A
Sbjct: 104 ILHIAQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQAG 155
Query: 252 MEHV 255
+ V
Sbjct: 156 ITEV 159
>gi|73541409|ref|YP_295929.1| aspartate racemase [Ralstonia eutropha JMP134]
gi|72118822|gb|AAZ61085.1| aspartate racemase [Ralstonia eutropha JMP134]
Length = 233
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 111/245 (45%), Gaps = 27/245 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IGI+GG+ +T++F+ ++V + A +E P VV + P + S L +
Sbjct: 4 IGILGGMGPLATVDFMDRVVRLTDASCDQEHLPMVVAHLPHTPDR----SRSILAGDELP 59
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE-CVAKE 202
L H+ + L + +V+PC+ SH W+ + E S P LH+ CVA
Sbjct: 60 LPHLLAGID--------LLNRNQVGLVVIPCNSSHHWYRQLRERSSAPILHIASTCVAA- 110
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT-IE 261
L G+ R+ VLAT L++ YQ+ L + + V+PD+A E V + T I
Sbjct: 111 --------LPHGTR-RVAVLATRGALASRIYQDALAERDIQPVVPDEA--EQVQVDTCIR 159
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARS 321
++ E A L+ + L R + I+G E+ L + ID LAR+
Sbjct: 160 SVKAGAFEAAGEALQAVLASLAARNIGVAIMGCTEIPVALRQLRSAPLTMIDSTLELARA 219
Query: 322 TVTWA 326
TV +A
Sbjct: 220 TVAFA 224
>gi|269836715|ref|YP_003318943.1| aspartate racemase [Sphaerobacter thermophilus DSM 20745]
gi|269785978|gb|ACZ38121.1| aspartate racemase [Sphaerobacter thermophilus DSM 20745]
Length = 247
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 24/257 (9%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSL 137
+ TIG++GG+ +T + K++ + A+ ++ ++ DP++ + A +H
Sbjct: 1 MTTKRTIGVLGGMGPLATADLYRKIIEATPARRDQDHLHVIIDADPSVPDR-TEALLHGG 59
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
T L I GA +R LE AGA IV+PC+ +HA+ G V + +IP + + +
Sbjct: 60 PDPTPWL--IAGA-------QR--LEGAGASFIVIPCNTAHAFLGAVRDAVAIPIISMID 108
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
A E+ A L P G G+LAT T+SAG YQ+ L G ++P V+
Sbjct: 109 ETAAEV--AALLP----RGAAAGILATSGTVSAGLYQDALAAAGLRALVPSPDAQAQVMA 162
Query: 258 PTIEALNHRDMEGARN-LLRIGIQLLLVRAVNAVIIGSDEMQGVL-PKDDPLLKKCIDPM 315
I A+ D+ A + L+ + A++ E+ +L P D P+ IDP
Sbjct: 163 -AIAAVKAGDLSRATTEKALVAAYELIEQGAGALLAACTELPLILQPNDIPV--PLIDPT 219
Query: 316 DALARSTVTWARSNKKL 332
LAR+ V A + + L
Sbjct: 220 AVLARAAVREALAARSL 236
>gi|228952962|ref|ZP_04115024.1| Aspartate racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|229070097|ref|ZP_04203364.1| Aspartate racemase [Bacillus cereus F65185]
gi|229079818|ref|ZP_04212350.1| Aspartate racemase [Bacillus cereus Rock4-2]
gi|365161022|ref|ZP_09357176.1| aspartate racemase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423424758|ref|ZP_17401789.1| aspartate racemase [Bacillus cereus BAG3X2-2]
gi|423504205|ref|ZP_17480797.1| aspartate racemase [Bacillus cereus HD73]
gi|449090027|ref|YP_007422468.1| Aspartate racemase [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|228703402|gb|EEL55856.1| Aspartate racemase [Bacillus cereus Rock4-2]
gi|228713011|gb|EEL64919.1| Aspartate racemase [Bacillus cereus F65185]
gi|228806683|gb|EEM53240.1| Aspartate racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|363621850|gb|EHL73035.1| aspartate racemase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401113530|gb|EJQ21399.1| aspartate racemase [Bacillus cereus BAG3X2-2]
gi|402457346|gb|EJV89114.1| aspartate racemase [Bacillus cereus HD73]
gi|449023784|gb|AGE78947.1| Aspartate racemase [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 226
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY+ +L E ++P ++ + HVI+
Sbjct: 112 EQSIK--------RIGLLGTKQTMEQDFYKSRLAKYNIETIIPNEEERTFIHHVIL 159
>gi|170703494|ref|ZP_02894257.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
gi|170131600|gb|EDT00165.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
Length = 230
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 107/256 (41%), Gaps = 41/256 (16%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + + +S + H H+ KS V
Sbjct: 2 KTIGLIGGMSWESSAEYYRMINRHS--------------------KALHGGHHNAKSVLV 41
Query: 143 QLDHIR----------GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+D A+ + + LE AGA +V+ + H HG + ++PF
Sbjct: 42 TVDFAEIEALQRAQDWVALGERMADAARQLEAAGADLVVLTTNTMHRVHGAIEAAVALPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKAT 251
LH+ + L+ A ++ R+ +L T T+ FY E+L+++ +V++PD+A
Sbjct: 102 LHIADPTGAALRAAGVE--------RVALLGTRYTMELPFYAERLRDKFDLDVLVPDEAA 153
Query: 252 MEHVIIPTIEALNHRDMEGARNLLRIG-IQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK 310
V + L H ++ A + + I L R AVI+G E+ ++ DD L
Sbjct: 154 RNDVHRIIYDELCHGVIDAASRAIYVAIIDELAKRGAQAVILGCTEITLLIGADDSPL-P 212
Query: 311 CIDPMDALARSTVTWA 326
D A + V WA
Sbjct: 213 VFDTTALHAMAAVEWA 228
>gi|152975643|ref|YP_001375160.1| aspartate racemase [Bacillus cytotoxicus NVH 391-98]
gi|152024395|gb|ABS22165.1| aspartate racemase [Bacillus cytotoxicus NVH 391-98]
Length = 226
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 23/177 (12%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIG+IGG+S ST ++Y + + N +L S+ + T+
Sbjct: 3 TIGLIGGLSWESTS------LYYKHINT------LALTQYNQNAKLVLYSMDFGEITTLL 50
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
+H V L +E +GA CI+M + H + +V + SIP LH+G+ A+++
Sbjct: 51 QNHQYEEVKHELIDVAKKVESSGADCILMCSNTVHQFADEVEKAVSIPLLHIGDVSAEKI 110
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT---MEHVII 257
+ ++K RIG+L T T+ FY+ +L N G E ++P K + H+I+
Sbjct: 111 VKQQIK--------RIGLLGTKQTMEKDFYKARLANYGIETMIPHKDERNLIHHIIL 159
>gi|448671106|ref|ZP_21687098.1| aspartate racemase [Haloarcula amylolytica JCM 13557]
gi|445766188|gb|EMA17322.1| aspartate racemase [Haloarcula amylolytica JCM 13557]
Length = 234
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 42/185 (22%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG++GG+S ST + ++ D +N+ L S + ++V
Sbjct: 2 QTIGVLGGMSSESTRTYYRRI------------------DRGINDALGGHSAGDIVIRSV 43
Query: 143 QLDHIRGAVSQNLRHKR------------AFLEQAGARCIVMPCHISHAWHGDVSEGCSI 190
A+ Q +R + LE AGA +VM + H + E S+
Sbjct: 44 NF----AAIEQCIRDQAWDSAASILVDAALDLEAAGADFVVMATNTMHRVAPQLVEALSV 99
Query: 191 PFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
PFLH+ + A+ ++ A ++ +GVL TD +S FY ++ + G E V+PD +
Sbjct: 100 PFLHIVDVAAEAIRAAGIET--------VGVLGTDTVMSGAFYHDRFASHGIETVVPDPS 151
Query: 251 TMEHV 255
E V
Sbjct: 152 AREDV 156
>gi|228997618|ref|ZP_04157228.1| Aspartate racemase [Bacillus mycoides Rock3-17]
gi|228762127|gb|EEM11063.1| Aspartate racemase [Bacillus mycoides Rock3-17]
Length = 226
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 13/147 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
+E +GA CI+M + H + +V + SIP LH+G+ A+E+ E +K RIG+
Sbjct: 69 IECSGADCILMCSNTVHQFAEEVEQAISIPLLHIGDVSAEEIVEHDVK--------RIGL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPTIEALNHRDMEGARNLLRIG 278
L T T+ FY+ +L N G E ++P ++ + HVI+ + R L+I
Sbjct: 121 LGTKQTMEQDFYKTRLANYGVETIIPKEDERNFIHHVILHELSKGIISQQSKVR-FLQI- 178
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKDD 305
IQ L+ +++G E+ ++ + D
Sbjct: 179 IQKLIENGAEGILLGCTEIPLLISQKD 205
>gi|229190733|ref|ZP_04317728.1| Aspartate racemase [Bacillus cereus ATCC 10876]
gi|228592758|gb|EEK50582.1| Aspartate racemase [Bacillus cereus ATCC 10876]
Length = 226
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLILYSMDFGEVITLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY+ +L E ++P ++ + HVI+
Sbjct: 112 EQNIK--------RIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVIL 159
>gi|228939755|ref|ZP_04102335.1| Aspartate racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228972637|ref|ZP_04133239.1| Aspartate racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228979226|ref|ZP_04139567.1| Aspartate racemase [Bacillus thuringiensis Bt407]
gi|384186694|ref|YP_005572590.1| aspartate racemase [Bacillus thuringiensis serovar chinensis CT-43]
gi|410675000|ref|YP_006927371.1| aspartate racemase [Bacillus thuringiensis Bt407]
gi|452199048|ref|YP_007479129.1| aspartate racemase family protein [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228780502|gb|EEM28728.1| Aspartate racemase [Bacillus thuringiensis Bt407]
gi|228787078|gb|EEM35055.1| Aspartate racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228819914|gb|EEM65959.1| Aspartate racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326940403|gb|AEA16299.1| aspartate racemase [Bacillus thuringiensis serovar chinensis CT-43]
gi|409174129|gb|AFV18434.1| aspartate racemase [Bacillus thuringiensis Bt407]
gi|452104441|gb|AGG01381.1| aspartate racemase family protein [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 226
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
+E++GA C++M + H + +V + SIP LH+G+ AKE+ E +K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
L T T+ FY+ +L E ++P ++ + HVI+
Sbjct: 121 LGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVIL 159
>gi|409438827|ref|ZP_11265890.1| putative racemase [Rhizobium mesoamericanum STM3625]
gi|408749487|emb|CCM77066.1| putative racemase [Rhizobium mesoamericanum STM3625]
Length = 239
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 121/261 (46%), Gaps = 42/261 (16%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIG+IGG+S S+ V+Y + + E L + L +V
Sbjct: 3 TIGLIGGMSFESSA------VYYRMVN------------EMVRERLGGLASADLLMHSVN 44
Query: 144 LDHIR--------GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
D I GA + L L+ AGARC+++ + H V+ S+P +H+
Sbjct: 45 FDEIVAMQKAGDWGAAANRLGDVALRLQIAGARCVLICTNTMHLIADQVAARISVPLVHI 104
Query: 196 GECVAKELK-EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP--DKATM 252
+ AK LK + +PL +LAT T+ GFY ++++ G ++++P D T+
Sbjct: 105 IDETAKSLKASGRKRPL---------LLATRYTMEHGFYASRMKSFGIDIIVPEADDRTV 155
Query: 253 EHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL-PKDDPLLKKC 311
H II E + + +R+ L I+ V+ +++I+G E+ +L PK+ PL
Sbjct: 156 VHDIIFN-ELCAGKVLNSSRDKLMQIIERERVKGADSIILGCTEICLILDPKNLPL--PG 212
Query: 312 IDPMDALARSTVTWARSNKKL 332
D + AR+ V +A S++++
Sbjct: 213 FDTTEIHARAAVEFALSDEEV 233
>gi|284161291|ref|YP_003399914.1| aspartate racemase [Archaeoglobus profundus DSM 5631]
gi|284011288|gb|ADB57241.1| aspartate racemase [Archaeoglobus profundus DSM 5631]
Length = 227
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 98/228 (42%), Gaps = 45/228 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHA--SVHSLKSKT 141
TIG++GG+S STL + +NEE+ +HS K
Sbjct: 3 TIGLLGGMSWESTLEYY----------------------KIINEEVAKRLNGLHSAKIIL 40
Query: 142 VQLD--HIRGAVSQN--------LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
D I SQN L K LE AGA I++ + H V ++P
Sbjct: 41 YSFDFSEIAELQSQNRWNELGEILAEKAKILENAGADFILICTNTMHKVADYVQSRINVP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
L + +CVA+E+ + +K R+G+L T T+ GFY++ L+ G EVV+PD+
Sbjct: 101 LLSIIDCVAREVVKRGIK--------RVGLLGTKFTMEDGFYEDGLRKYGLEVVIPDEED 152
Query: 252 MEHVIIPTIEALNHRDMEGA--RNLLRIGIQLLLVRAVNAVIIGSDEM 297
V E L + + R L+ I I+ L ++ VI+G E+
Sbjct: 153 RNEVHRIIFEELCRGIFKDSSKRKLIEI-IERLKMKGAEGVILGCTEL 199
>gi|423436133|ref|ZP_17413114.1| aspartate racemase [Bacillus cereus BAG4X12-1]
gi|401122747|gb|EJQ30531.1| aspartate racemase [Bacillus cereus BAG4X12-1]
Length = 226
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEIV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY+ +L E ++P ++ + HVI+
Sbjct: 112 EQSIK--------RIGLLGTKQTMEQDFYKSRLAKYNIETIIPNEEERTFIHHVIL 159
>gi|423617078|ref|ZP_17592912.1| aspartate racemase [Bacillus cereus VD115]
gi|401256263|gb|EJR62473.1| aspartate racemase [Bacillus cereus VD115]
Length = 227
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 5 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 52
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 53 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 112
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY +L E ++P ++ + HVI+
Sbjct: 113 EQNIK--------RIGLLGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVIL 160
>gi|229116159|ref|ZP_04245550.1| Aspartate racemase [Bacillus cereus Rock1-3]
gi|407705078|ref|YP_006828663.1| hypothetical protein MC28_1842 [Bacillus thuringiensis MC28]
gi|423379543|ref|ZP_17356827.1| aspartate racemase [Bacillus cereus BAG1O-2]
gi|423447198|ref|ZP_17424077.1| aspartate racemase [Bacillus cereus BAG5O-1]
gi|423545955|ref|ZP_17522313.1| aspartate racemase [Bacillus cereus HuB5-5]
gi|228667276|gb|EEL22727.1| Aspartate racemase [Bacillus cereus Rock1-3]
gi|401131194|gb|EJQ38848.1| aspartate racemase [Bacillus cereus BAG5O-1]
gi|401181768|gb|EJQ88915.1| aspartate racemase [Bacillus cereus HuB5-5]
gi|401633191|gb|EJS50973.1| aspartate racemase [Bacillus cereus BAG1O-2]
gi|407382763|gb|AFU13264.1| Aspartate racemase [Bacillus thuringiensis MC28]
Length = 227
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 5 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 52
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 53 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 112
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY +L E ++P ++ + HVI+
Sbjct: 113 EQNIK--------RIGLLGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVIL 160
>gi|229153749|ref|ZP_04281890.1| Aspartate racemase [Bacillus cereus m1550]
gi|228629702|gb|EEK86389.1| Aspartate racemase [Bacillus cereus m1550]
Length = 226
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
+E++GA C++M + H + ++ + SIP LH+G+ AKE+ E +K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEIEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
L T T+ FY+ +L E ++P ++ + HVI+
Sbjct: 121 LGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVIL 159
>gi|339008069|ref|ZP_08640643.1| aspartate racemase [Brevibacillus laterosporus LMG 15441]
gi|338775272|gb|EGP34801.1| aspartate racemase [Brevibacillus laterosporus LMG 15441]
Length = 251
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 28/171 (16%)
Query: 84 TIGIIGGVSVSSTLNF---LGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLK 138
TIG++GG+S ST + + ++V A + +C + V F V K
Sbjct: 20 TIGLLGGMSWESTTEYYKNINQMVNQRVGALASAKCVVYSVN---------FEEIVQCQK 70
Query: 139 SKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
+ D + Q +H LE+AGA C+++ + H +S +IPFLH+ +
Sbjct: 71 EG--RWDDATAILGQAAQH----LEKAGAECLLVCTNTMHKIAKQISASVTIPFLHIADA 124
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK 249
A++++E KL+ +IG+L T T+ F+ EK+++ G E+++P++
Sbjct: 125 TAEKIREQKLR--------KIGLLGTKFTMEQDFFIEKMKDHGIEIIVPEE 167
>gi|229005219|ref|ZP_04162937.1| Aspartate racemase [Bacillus mycoides Rock1-4]
gi|228756030|gb|EEM05357.1| Aspartate racemase [Bacillus mycoides Rock1-4]
Length = 226
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 11/99 (11%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
+E +GA CI+M + H + +V + SIP LH+G+ A+E+ E +K RIG+
Sbjct: 69 IECSGADCILMCSNTVHQFAEEVEQAISIPLLHIGDVSAEEIVEHDVK--------RIGL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
L T T+ FY+ +L N G E ++P ++ + HVI+
Sbjct: 121 LGTKQTMEQDFYKTRLANYGVETIIPKEDERNFIHHVIL 159
>gi|229060327|ref|ZP_04197693.1| Aspartate racemase [Bacillus cereus AH603]
gi|229167481|ref|ZP_04295219.1| Aspartate racemase [Bacillus cereus AH621]
gi|423593377|ref|ZP_17569408.1| aspartate racemase [Bacillus cereus VD048]
gi|228616043|gb|EEK73130.1| Aspartate racemase [Bacillus cereus AH621]
gi|228718917|gb|EEL70534.1| Aspartate racemase [Bacillus cereus AH603]
gi|401227043|gb|EJR33573.1| aspartate racemase [Bacillus cereus VD048]
Length = 227
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST ++Y + + + N +L S+ + T+
Sbjct: 5 IGLIGGLSWESTS------LYYKHINT------ITLSQYDQNAKLVLYSMDFGEVTTLLQ 52
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E +GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 53 NHQYEEVKNELVAVAKKVEHSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 112
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY +L E ++P ++ + HVI+
Sbjct: 113 EQNIK--------RIGLLGTKQTMEEDFYTSRLAKYNIETIIPNDEERTFIHHVIL 160
>gi|423453897|ref|ZP_17430750.1| aspartate racemase [Bacillus cereus BAG5X1-1]
gi|423468986|ref|ZP_17445730.1| aspartate racemase [Bacillus cereus BAG6O-2]
gi|423559652|ref|ZP_17535954.1| aspartate racemase [Bacillus cereus MC67]
gi|401136867|gb|EJQ44451.1| aspartate racemase [Bacillus cereus BAG5X1-1]
gi|401187821|gb|EJQ94892.1| aspartate racemase [Bacillus cereus MC67]
gi|402440337|gb|EJV72330.1| aspartate racemase [Bacillus cereus BAG6O-2]
Length = 227
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 5 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 52
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E +GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 53 NHQYEEVKNELVTVAKKVENSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 112
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY +L E ++P ++ + HVI+
Sbjct: 113 EQNIK--------RIGLLGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVIL 160
>gi|402301090|ref|ZP_10820499.1| aspartate racemase [Bacillus alcalophilus ATCC 27647]
gi|401723779|gb|EJS97209.1| aspartate racemase [Bacillus alcalophilus ATCC 27647]
Length = 245
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 118/257 (45%), Gaps = 26/257 (10%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCNDPALNEELFHASVHS 136
+NQ TIGI+GG+ +T++ K++ + ++D + P ++ N+ + + +A +
Sbjct: 1 MNQ--TIGILGGMGPLATVDLAEKIILLTKVSRDQDHIP-LLIYNNTRIPSRV-NAIMDQ 56
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
+S V+L I+ A LE+AG IVMPCH +H W D+ + P L++
Sbjct: 57 QESPVVEL--IKTA---------KVLEKAGVDFIVMPCHTAHYWLEDIQKHIHTPILNMI 105
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
E +K + +I +LAT T+ A YQ+ Q++ ++ +P K + ++
Sbjct: 106 ENTVHFVKNS------INGEKQILLLATSGTVKAQLYQKAFQSEDVQLAIPTKKE-QKIV 158
Query: 257 IPTIEALNHRDMEGAR--NLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDP 314
I+ + + + N L IQ + ++A+I G E+ + P DP
Sbjct: 159 ASAIDEVKAGYIANNQYLNELNKIIQKYEQKGISAIIGGCTEIPLLFPYIQNKKITKYDP 218
Query: 315 MDALARSTVTWARSNKK 331
LA+ V A N K
Sbjct: 219 TLMLAKMAVKKAMQNNK 235
>gi|229017933|ref|ZP_04174811.1| Aspartate racemase [Bacillus cereus AH1273]
gi|229024154|ref|ZP_04180621.1| Aspartate racemase [Bacillus cereus AH1272]
gi|423391052|ref|ZP_17368278.1| aspartate racemase [Bacillus cereus BAG1X1-3]
gi|228737150|gb|EEL87678.1| Aspartate racemase [Bacillus cereus AH1272]
gi|228743358|gb|EEL93480.1| Aspartate racemase [Bacillus cereus AH1273]
gi|401636885|gb|EJS54638.1| aspartate racemase [Bacillus cereus BAG1X1-3]
Length = 227
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST ++Y + + N +L S+ + T+
Sbjct: 5 IGLIGGLSWESTS------LYYKHINTLTLSKY------NQNAKLVLYSMDFGEVTTLLQ 52
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E +GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 53 NHQYEEVKNELVTVAKKVENSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 112
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY +L E ++P ++ + HVI+
Sbjct: 113 EQNIK--------RIGLLGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVIL 160
>gi|229164447|ref|ZP_04292374.1| Aspartate racemase [Bacillus cereus R309803]
gi|228619020|gb|EEK75919.1| Aspartate racemase [Bacillus cereus R309803]
Length = 238
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 111/254 (43%), Gaps = 36/254 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
+GIIGG+ +T++ + K++ Y+ PA+ ++ +H + Q+
Sbjct: 9 VGIIGGMGPLATVDLMNKIISYT---------------PAMKDQ---DHIHIIADNYSQI 50
Query: 145 DHIRGAV-------SQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
A+ + + L+ AGA +V+ C+ +H ++ V +IP LH+
Sbjct: 51 PDRTTAILGKGIDPTPYIVQSAQRLQNAGADFLVIACNTAHFFYKAVKRSVNIPILHMPL 110
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
A+ ++E + ++G+LATD T+ YQ QN +V+ PDK M+ ++
Sbjct: 111 ETARFVQENNFR--------KVGLLATDGTIKTELYQNSCQNCRIDVIEPDKE-MQKKVM 161
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I A+ +++ L + L A+I G E+ VL + I+P +
Sbjct: 162 KGIYAIKSGNLKTGCLYLSMVADKLKESGAEAIIAGCTEVPLVLKSSKNIC--VINPTEI 219
Query: 318 LARSTVTWARSNKK 331
+A+ + A +K
Sbjct: 220 VAKVVIKIANKTEK 233
>gi|339502316|ref|YP_004689736.1| aspartate racemase [Roseobacter litoralis Och 149]
gi|338756309|gb|AEI92773.1| aspartate racemase-like protein [Roseobacter litoralis Och 149]
Length = 235
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 35/255 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSA-KDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G++GG+ V +T+ + ++ +A +D ++ P +V +P + + H ++
Sbjct: 8 VGVLGGMGVEATIALMQRVHGATAGQDDQDHVPLIVDMNPQVPSRIRH---------LIE 58
Query: 144 LDHIR-GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC---- 198
D G V L LEQAGA+ + MPC+ +H + + SIP LH+ E
Sbjct: 59 KDGPDPGPV---LAEMAVRLEQAGAKALAMPCNTAHLYAPQIKRSVSIPLLHMPELACAY 115
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIP 258
A+ +K+ ++ +G+LA+ AT S G +++ G + P++ E+ I+
Sbjct: 116 AARSMKQGEI----------VGILASPATNSTGLFKDLCAQNGTVSIFPEE---ENDILA 162
Query: 259 TIEAL-NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK-DDPLLKKCIDPMD 316
I + N + +LL Q L R VIIG E + P+ +D +D
Sbjct: 163 AIRRIKNAGPGDADIDLLEREAQKLQSRGATCVIIGCSEFSLASQRLASPV--PVVDTLD 220
Query: 317 ALARSTVTWARSNKK 331
LA + V ++ + K
Sbjct: 221 VLAHAVVAFSGARAK 235
>gi|423510681|ref|ZP_17487212.1| aspartate racemase [Bacillus cereus HuA2-1]
gi|402453634|gb|EJV85434.1| aspartate racemase [Bacillus cereus HuA2-1]
Length = 227
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 5 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 52
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E +GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 53 NHQYEEVKNELVTVAKKVENSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 112
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY +L E ++P ++ + HVI+
Sbjct: 113 EQNIK--------RIGLLGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVIL 160
>gi|423396782|ref|ZP_17373983.1| aspartate racemase [Bacillus cereus BAG2X1-1]
gi|423407633|ref|ZP_17384782.1| aspartate racemase [Bacillus cereus BAG2X1-3]
gi|401651358|gb|EJS68923.1| aspartate racemase [Bacillus cereus BAG2X1-1]
gi|401658959|gb|EJS76448.1| aspartate racemase [Bacillus cereus BAG2X1-3]
Length = 227
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 5 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEITTLLQ 52
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V + SIP LH+G+ A+++
Sbjct: 53 NHQYEEVKNELITVAKKVEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAEKMV 112
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY+ +L N E ++P ++ + HVI+
Sbjct: 113 EQNIK--------RIGLLGTKQTMEQDFYKSRLANYNIETIIPNDEERTFIHHVIL 160
>gi|319942626|ref|ZP_08016934.1| hypothetical protein HMPREF9464_02153 [Sutterella wadsworthensis
3_1_45B]
gi|319803805|gb|EFW00737.1| hypothetical protein HMPREF9464_02153 [Sutterella wadsworthensis
3_1_45B]
Length = 479
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 28/254 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G+IGG+ ++T++ K+V + AK +E VV +P + +T
Sbjct: 236 VGLIGGLGPAATVDLYDKIVKATPAKTDQEHIKLVVEQNP------------QIPDRTAC 283
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L + + L H LE G +++PC+ +HA+ + IPF+++ + E+
Sbjct: 284 LLNGGEDPTLALFHCAQRLEADGCSTLIVPCNTAHAFLPYLERFIKIPFINMQQAALDEI 343
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII----PT 259
+ + G+ +IG+LAT T+ G Y +K G + +PD E V+ P
Sbjct: 344 QN------KLGTRAKIGLLATTGTVQTGIYGDKANAMGLPMFVPDDVHQERVMAAIYGPQ 397
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK-----CIDP 314
+ + +L+ L+ N +I+G E+ +L + D +DP
Sbjct: 398 GAKAGYTNGICREDLISAAEYLVKTHGCNCLILGCTELPLILDESDDFEVAGSRVIVVDP 457
Query: 315 MDALARSTVTWARS 328
ALAR V A
Sbjct: 458 TAALARKVVKTAED 471
>gi|28210540|ref|NP_781484.1| aspartate racemase [Clostridium tetani E88]
gi|28202977|gb|AAO35421.1| aspartate racemase [Clostridium tetani E88]
Length = 231
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 119/253 (47%), Gaps = 37/253 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
+GIIGG+ +T++ K+V Y+ +++ VV + N ++ + + L + L
Sbjct: 5 VGIIGGMGPKATVDLYNKIVDYTDASSDQDHLHVVIDG---NAKIPDRTSYILGNGKSPL 61
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL- 203
D + V R L+ AGA ++MPC+ +H ++ ++ E ++PF+++ E V K +
Sbjct: 62 DEL---VKTGER-----LKNAGADFLIMPCNTAHYFYDELYEKLNMPFINMIEEVGKYIV 113
Query: 204 -KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV--IIPTI 260
K K+K +G+LAT T Y+ + G ++++P K + V + +
Sbjct: 114 TKHGKIK---------VGLLATLGTYQGKIYERYCKELGLDIIIPSKEVRQKVSDAVYIV 164
Query: 261 EALNHRDMEGARNLLRIGIQLLLV----RAVNAVIIGSDEMQGVLPKDDPLLK--KCIDP 314
++ G RN + +L + VNAVI+G E+ + + LK + I
Sbjct: 165 KS-------GQRNFTKEFAMDMLKEFNEKDVNAVILGCTELPLIFQPLENDLKDFEFISS 217
Query: 315 MDALARSTVTWAR 327
D LA+ T+ +
Sbjct: 218 TDILAKETIKRVK 230
>gi|261886484|ref|ZP_06010523.1| aspartate racemase [Campylobacter fetus subsp. venerealis str.
Azul-94]
Length = 232
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 105/243 (43%), Gaps = 44/243 (18%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKSKTV 142
+G+IGG+S STL + LNEE+ +HS K
Sbjct: 7 VGLIGGMSWESTLTYY----------------------KVLNEEIRDRLGGLHSAKCIVY 44
Query: 143 QLD--HIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
LD I SQN K LE+AGA C+++ + H ++ IPF
Sbjct: 45 SLDFHEIEKFQSQNEWQKSGKVLLDAALNLEKAGAECVMICTNTMHKVADMITASLKIPF 104
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
+H+ + A+ LK+ K + +L T T++ FY++K+ N EVV+P+K+
Sbjct: 105 IHIADVTAQALKQNGSK--------KALLLGTKYTMTESFYKDKISNNSIEVVVPNKSDT 156
Query: 253 EHVIIPTIEALNHRDMEGARNLLRIGIQLLLVR-AVNAVIIGSDEMQGVLPKDDPLLKKC 311
+ + L +++ + + I I + V++VI+G E+ G+L KDD K
Sbjct: 157 DFINSVIFNELCIGNIKQSSKIEFIKIINESKKLGVDSVILGCTEI-GLLIKDDDCDIKI 215
Query: 312 IDP 314
D
Sbjct: 216 FDT 218
>gi|163940450|ref|YP_001645334.1| aspartate racemase [Bacillus weihenstephanensis KBAB4]
gi|163862647|gb|ABY43706.1| aspartate racemase [Bacillus weihenstephanensis KBAB4]
Length = 227
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST ++Y + + N +L S+ + T+
Sbjct: 5 IGLIGGLSWESTS------LYYKHINTLTLSKY------DQNAKLVLYSMDFGEVTTLLQ 52
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E +GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 53 NHQYEEVKNELVTVAKKVENSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 112
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY +L E ++P ++ + HVI+
Sbjct: 113 EQNIK--------RIGLLGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVIL 160
>gi|134296325|ref|YP_001120060.1| aspartate racemase [Burkholderia vietnamiensis G4]
gi|134139482|gb|ABO55225.1| aspartate racemase [Burkholderia vietnamiensis G4]
Length = 230
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 105/257 (40%), Gaps = 43/257 (16%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + + YS + H H+ KS V
Sbjct: 2 KTIGLIGGMSWESSAEYYRMINRYS--------------------KALHGGHHNAKSVLV 41
Query: 143 QLDHIRGAVSQNLRHKRAF----------LEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+D Q + RA LE AGA IV+ + H H + ++PF
Sbjct: 42 TVDFAEIEALQRAQDWRALGERMADAARRLEAAGADLIVLTTNTMHRVHDAIEAAVTLPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKAT 251
LH+ + L+ A ++ R+ +L T T+ FY ++L+++ G +V++PD+
Sbjct: 102 LHIADPTGNALRAAGVE--------RVALLGTRYTMELPFYAQRLRDRFGLDVLVPDEPA 153
Query: 252 MEHVIIPTIEALNHRDMEGARNLLRIG-IQLLLVRAVNAVIIGSDEMQGVL-PKDDPLLK 309
V + L H ++ + I L R AVI+G E+ ++ D PL
Sbjct: 154 RADVHRIIYDELCHGRIDAHSRATYVAIIDELARRGAQAVILGCTEITLLIGDADSPL-- 211
Query: 310 KCIDPMDALARSTVTWA 326
D A++ V WA
Sbjct: 212 PVFDTTTLHAKAAVEWA 228
>gi|374293714|ref|YP_005040737.1| putative aspartate racemase [Azospirillum lipoferum 4B]
gi|357427117|emb|CBS90055.1| Putative aspartate racemase [Azospirillum lipoferum 4B]
Length = 244
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 15/151 (9%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ GA +V+ + H V +P LH+ + A+ ++ A L+ R+G+
Sbjct: 83 LERGGADFVVICTNTMHRMADQVQAAIGLPLLHIADPTAERIRAAGLR--------RVGL 134
Query: 222 LATDATLSAGFYQEKL-QNQGFEVVLPDKA---TMEHVIIPTIEALNHRDMEGARNLLRI 277
L T T+ FY+ +L Q G EV++PD A T+ VI E + R E +R R
Sbjct: 135 LGTAFTMEQDFYKGRLVQKHGLEVLVPDDADRSTVHRVIYD--ELVQGRIEEASRQAYRG 192
Query: 278 GIQLLLVRAVNAVIIGSDE-MQGVLPKDDPL 307
I L+ R AVI+G E M V P+D P+
Sbjct: 193 VIARLVERGAEAVILGCTEIMLLVRPEDSPV 223
>gi|303257154|ref|ZP_07343168.1| putative aspartate racemase [Burkholderiales bacterium 1_1_47]
gi|302860645|gb|EFL83722.1| putative aspartate racemase [Burkholderiales bacterium 1_1_47]
Length = 484
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 32/260 (12%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IGI+GG+ ++T++ K+ + AK+ +E V +P + + +T
Sbjct: 241 IGIVGGLGPAATVDLYDKITKATPAKNDQEHIKVAVEQNPQIPD------------RTKY 288
Query: 144 LDHIRGAVSQNLRHKRAF--LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
L H G V L A LE+ IV+ C+ +HA+ + S+P +++ + +
Sbjct: 289 LLH--GGVDPTLSLYAACRKLEKDAVDAIVIACNTAHAYFETIVPHLSVPLINMQQVTLE 346
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA----TMEHVII 257
E+++ + G V IG++ATD T+ G Y K ++ +V+PDK ME +
Sbjct: 347 EIRD------KFGPDVVIGLMATDGTIETGIYGRKAKSMKLAMVVPDKEHQAMVMEAIYG 400
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL-----KKCI 312
D LL+ L+ + A+I+G E+ +L + D + +
Sbjct: 401 EKGVKAGFTDGHCKEVLLKAAEHLVRDKGAQALILGCTELPLILEETDNIKLGDGHAAIV 460
Query: 313 DPMDALARSTVTWARSNKKL 332
DP +LAR V A K+
Sbjct: 461 DPTASLARRVVKVAGEITKI 480
>gi|229133473|ref|ZP_04262300.1| Aspartate racemase [Bacillus cereus BDRD-ST196]
gi|423668351|ref|ZP_17643380.1| aspartate racemase [Bacillus cereus VDM034]
gi|423675520|ref|ZP_17650459.1| aspartate racemase [Bacillus cereus VDM062]
gi|228649873|gb|EEL05881.1| Aspartate racemase [Bacillus cereus BDRD-ST196]
gi|401302342|gb|EJS07922.1| aspartate racemase [Bacillus cereus VDM034]
gi|401308544|gb|EJS13939.1| aspartate racemase [Bacillus cereus VDM062]
Length = 227
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST ++Y + + N +L S+ + T+
Sbjct: 5 IGLIGGLSWESTS------LYYKHINTLTLSKY------DQNAKLVLYSMDFGEVTTLLQ 52
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E +GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 53 NHQYEEVKNELVTVAKKVENSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 112
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY +L E ++P ++ + HVI+
Sbjct: 113 EQNIK--------RIGLLGTKQTMEEDFYTSRLAKYNIETIIPNDEERTFIHHVIL 160
>gi|385208935|ref|ZP_10035803.1| aspartate racemase [Burkholderia sp. Ch1-1]
gi|385181273|gb|EIF30549.1| aspartate racemase [Burkholderia sp. Ch1-1]
Length = 232
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 29/250 (11%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAK----DAEECPPFVVCNDPALNEELFHASVHSLK 138
TIG+IGG+S S+ + KL+ AK ++ D A E L A S
Sbjct: 2 KTIGVIGGMSWESSTEYY-KLLNRHAKARLGGHHNARSLMLSVDFAPIEALQRAGDWS-- 58
Query: 139 SKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
A+ Q + LEQ GA +++ + H + + +PFLH+ +
Sbjct: 59 -----------ALGQQMADAARRLEQGGADLVMLATNTMHRVYESIEAAIDVPFLHIADP 107
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVII 257
L+ A ++ R+G+L T T+ FY +L + G E ++PD+A V
Sbjct: 108 TGSALRAAGIE--------RVGLLGTRYTMEQTFYTGRLHERYGLETLVPDQAERADVHR 159
Query: 258 PTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
+ L H + + +R + + I+ L R AVI+G E+ ++ +D ++ D
Sbjct: 160 IIYDELCHGKVNDASRAVYQRVIEALAARGAQAVILGCTEITLLIKPEDSVV-PVFDTTA 218
Query: 317 ALARSTVTWA 326
A++ V WA
Sbjct: 219 LHAQAAVEWA 228
>gi|229097169|ref|ZP_04228131.1| Aspartate racemase [Bacillus cereus Rock3-29]
gi|423442586|ref|ZP_17419492.1| aspartate racemase [Bacillus cereus BAG4X2-1]
gi|423465653|ref|ZP_17442421.1| aspartate racemase [Bacillus cereus BAG6O-1]
gi|423534999|ref|ZP_17511417.1| aspartate racemase [Bacillus cereus HuB2-9]
gi|423539735|ref|ZP_17516126.1| aspartate racemase [Bacillus cereus HuB4-10]
gi|423624244|ref|ZP_17600022.1| aspartate racemase [Bacillus cereus VD148]
gi|228685980|gb|EEL39896.1| Aspartate racemase [Bacillus cereus Rock3-29]
gi|401173270|gb|EJQ80482.1| aspartate racemase [Bacillus cereus HuB4-10]
gi|401257556|gb|EJR63755.1| aspartate racemase [Bacillus cereus VD148]
gi|402414438|gb|EJV46771.1| aspartate racemase [Bacillus cereus BAG4X2-1]
gi|402417468|gb|EJV49770.1| aspartate racemase [Bacillus cereus BAG6O-1]
gi|402462730|gb|EJV94435.1| aspartate racemase [Bacillus cereus HuB2-9]
Length = 227
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 5 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 52
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 53 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 112
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY +L E ++P ++ + HVI+
Sbjct: 113 EQNIK--------RIGLLGTKQTMEQDFYTSRLAKYNIETLIPNDEERTFIHHVIL 160
>gi|228965574|ref|ZP_04126656.1| Aspartate racemase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|402560108|ref|YP_006602832.1| aspartate racemase [Bacillus thuringiensis HD-771]
gi|228794167|gb|EEM41688.1| Aspartate racemase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|401788760|gb|AFQ14799.1| aspartate racemase [Bacillus thuringiensis HD-771]
Length = 226
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 98/209 (46%), Gaps = 29/209 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGADCLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPTI- 260
+ +K RIG+L T T+ FY+ +L E ++P ++ + HVI+ +
Sbjct: 112 KQNIK--------RIGLLGTKQTMEQDFYKSRLAKYNIETIIPNEEERTVIHHVILDELS 163
Query: 261 -----EALNHRDMEGARNLLRIGIQLLLV 284
EA + ++ ++L++ G + +L+
Sbjct: 164 KGIISEASKEKLLQITKSLIQNGAEGILL 192
>gi|392392806|ref|YP_006429408.1| aspartate racemase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390523884|gb|AFL99614.1| aspartate racemase [Desulfitobacterium dehalogenans ATCC 51507]
Length = 233
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 102/240 (42%), Gaps = 47/240 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL--FHASVHSLKS-- 139
TIG+IGG+S S+ + +NEE+ +HS +
Sbjct: 3 TIGLIGGMSWESSAEYY----------------------RIINEEVKKRRGGLHSARCIL 40
Query: 140 KTVQLDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
+V + I S+ HK A LE AGA CIV+ + H ++ G IP
Sbjct: 41 YSVDFEEIEMCQSRGEWHKAAEILANAARSLEAAGAECIVLCTNTMHKVADEIQAGMRIP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---D 248
LH+ + AK+ +K IG+L T T+ FY +L+ QG +V+ P D
Sbjct: 101 LLHIADITAKQALTHNIKT--------IGLLGTRYTMEQDFYTSRLETQGLKVLTPEEGD 152
Query: 249 KATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
+ + VI + L E +RN + IQ L+ + +++G E+ ++ ++D +
Sbjct: 153 RGIVNEVIYHEL-CLGEISNE-SRNQFKRMIQSLVEQGAEGIVLGCTEIGLLIKQEDSFV 210
>gi|398304928|ref|ZP_10508514.1| aspartate racemase [Bacillus vallismortis DV1-F-3]
Length = 227
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 113/268 (42%), Gaps = 63/268 (23%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAK------DAE-------ECPPFVVCNDPALNEELFH 131
IGI+ G+ ST F+ K++ Y K D + CP + P +EE+
Sbjct: 2 IGILAGMGPKSTSPFIDKVIDYCQKLYGASHDIDFPHMMIYSCPTPFYTDRPIDHEEMKR 61
Query: 132 ASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
A I GAV LE+ G I +PC+ +H ++ +V + ++P
Sbjct: 62 AI-------------IDGAVK---------LEKTGVDFIALPCNTAHVYYEEVQQALAVP 99
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ + KE+ + + VL T++T+ +G YQ+ L+ G EVV D
Sbjct: 100 LLHITKETVKEMPH---------TAKKAAVLGTESTIQSGIYQKGLKANGQEVVHKDHWQ 150
Query: 252 ME-HVIIPTIEALNHRDMEGA--RNLL-----RIGIQLLLVRAVNAVIIGSDEMQGVLPK 303
+ +I I+ NH + A + L I + +NAV+ D +Q +P
Sbjct: 151 QAVNQLIAAIKQPNHTEQTHALWQKLYAEISQHADIIISACTDLNAVL---DHIQSEIP- 206
Query: 304 DDPLLKKCIDPMDALARSTVTWARSNKK 331
ID D LA+STV+ S ++
Sbjct: 207 -------IIDSSDCLAKSTVSTYLSYQR 227
>gi|410583554|ref|ZP_11320660.1| aspartate racemase [Thermaerobacter subterraneus DSM 13965]
gi|410506374|gb|EKP95883.1| aspartate racemase [Thermaerobacter subterraneus DSM 13965]
Length = 309
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 21/249 (8%)
Query: 80 NQANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLK 138
+ IGI+GG+ +T++ K+V + A+ ++ V+ N+P + +
Sbjct: 64 DPGPAIGILGGMGPEATVDLFAKIVRATPARVDQDHVRIVIDNNPKIPDRTAFLRGAGPD 123
Query: 139 SKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
+ I+G VS GA I++PC+ +H + + +P LH+
Sbjct: 124 PVPAMVASIQGLVSL------------GASLILIPCNTAHVYFDRLQAASPVPILHIMRE 171
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI-- 256
VA+ L L G G+LAT+ T+ +G Y L G EVV+P V
Sbjct: 172 VARALVAGGAPGLPPAGGP-AGLLATELTVESGLYHRALAEVGLEVVVPAPEYQAEVTRA 230
Query: 257 IPTIEALNHRDMEGARN-LLRIGIQLLLVRAVNAVIIGSDEMQGVL-PKDDPLLKKCIDP 314
I + + E AR LL G L+ R +I G E+ VL P D P+ +DP
Sbjct: 231 IFGADGIKAGVYEPARQRLLEAGTH-LVERGARVLIAGCTELPLVLRPGDFPV--PWVDP 287
Query: 315 MDALARSTV 323
+ LAR+ +
Sbjct: 288 AEILARAAL 296
>gi|423562959|ref|ZP_17539235.1| aspartate racemase [Bacillus cereus MSX-A1]
gi|401199642|gb|EJR06540.1| aspartate racemase [Bacillus cereus MSX-A1]
Length = 226
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 98/209 (46%), Gaps = 29/209 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGADCLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPTI- 260
+ +K RIG+L T T+ FY+ +L E ++P ++ + HVI+ +
Sbjct: 112 KQNIK--------RIGLLGTKQTMEQDFYKSRLAKYNIETIIPNEEERTVIHHVILDELS 163
Query: 261 -----EALNHRDMEGARNLLRIGIQLLLV 284
EA + ++ ++L++ G + +L+
Sbjct: 164 KGIISEASKEKLLQITKSLIQNGAEGMLL 192
>gi|218897646|ref|YP_002446057.1| aspartate racemase [Bacillus cereus G9842]
gi|228905578|ref|ZP_04069526.1| Aspartate racemase [Bacillus thuringiensis IBL 4222]
gi|423360386|ref|ZP_17337889.1| aspartate racemase [Bacillus cereus VD022]
gi|434375556|ref|YP_006610200.1| aspartate racemase [Bacillus thuringiensis HD-789]
gi|218542682|gb|ACK95076.1| aspartate racemase family protein [Bacillus cereus G9842]
gi|228854053|gb|EEM98763.1| Aspartate racemase [Bacillus thuringiensis IBL 4222]
gi|401082476|gb|EJP90746.1| aspartate racemase [Bacillus cereus VD022]
gi|401874113|gb|AFQ26280.1| aspartate racemase [Bacillus thuringiensis HD-789]
Length = 226
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 106/230 (46%), Gaps = 37/230 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGADCLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPTI- 260
+ +K RIG+L T T+ FY+ +L E ++P ++ + HVI+ +
Sbjct: 112 KQNIK--------RIGLLGTKQTMEQDFYKSRLAKYNIETIIPNEEERTVIHHVILDELS 163
Query: 261 -----EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
EA + ++ ++L++ G + +++G E+ ++ ++D
Sbjct: 164 KGIISEASKEKLLQITKSLIQNGAE--------GILLGCTEIPLLISQND 205
>gi|75762859|ref|ZP_00742675.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|74489652|gb|EAO53052.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
Length = 246
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 106/230 (46%), Gaps = 37/230 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 24 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 71
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 72 NHQYEEVKNELVTVAKKVEKSGADCLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 131
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPTI- 260
+ +K RIG+L T T+ FY+ +L E ++P ++ + HVI+ +
Sbjct: 132 KQNIK--------RIGLLGTKQTMEQDFYKSRLAKYNIETIIPNEEERTVIHHVILDELS 183
Query: 261 -----EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
EA + ++ ++L++ G + +++G E+ ++ ++D
Sbjct: 184 KGIISEASKEKLLQITKSLIQNGAE--------GILLGCTEIPLLISQND 225
>gi|229011906|ref|ZP_04169086.1| Aspartate racemase [Bacillus mycoides DSM 2048]
gi|423487827|ref|ZP_17464509.1| aspartate racemase [Bacillus cereus BtB2-4]
gi|423493549|ref|ZP_17470193.1| aspartate racemase [Bacillus cereus CER057]
gi|423499659|ref|ZP_17476276.1| aspartate racemase [Bacillus cereus CER074]
gi|423662450|ref|ZP_17637619.1| aspartate racemase [Bacillus cereus VDM022]
gi|228749320|gb|EEL99165.1| Aspartate racemase [Bacillus mycoides DSM 2048]
gi|401153220|gb|EJQ60647.1| aspartate racemase [Bacillus cereus CER057]
gi|401156917|gb|EJQ64319.1| aspartate racemase [Bacillus cereus CER074]
gi|401298069|gb|EJS03674.1| aspartate racemase [Bacillus cereus VDM022]
gi|402435892|gb|EJV67925.1| aspartate racemase [Bacillus cereus BtB2-4]
Length = 227
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 5 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 52
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E +GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 53 NHQYEEVKNELVAVAKKVEHSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 112
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY +L E ++P ++ + HVI+
Sbjct: 113 EQNIK--------RIGLLGTKQTMEEDFYTSRLAKYNIETIIPNDEERTFIHHVIL 160
>gi|421874559|ref|ZP_16306162.1| putative aspartate/glutamate racemase [Brevibacillus laterosporus
GI-9]
gi|372456415|emb|CCF15711.1| putative aspartate/glutamate racemase [Brevibacillus laterosporus
GI-9]
Length = 234
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 28/171 (16%)
Query: 84 TIGIIGGVSVSSTLNF---LGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHSLK 138
TIG++GG+S ST + + ++V A + +C + V EE+
Sbjct: 3 TIGLLGGMSWESTTEYYKHINQMVNQRVGALASAKCVVYSVNF-----EEIVQCQ----- 52
Query: 139 SKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
K + D + Q +H LE+AGA C+++ + H +S +IPFLH+ +
Sbjct: 53 -KEGRWDDAAAILGQAAQH----LEKAGAECLLVCTNTMHKIAKQISASVTIPFLHIADA 107
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK 249
A++++E KL+ +IG+L T T+ F+ EK+++ G E+++P++
Sbjct: 108 TAEKIREQKLR--------KIGLLGTKFTMEQDFFIEKMKDHGIEIIVPEE 150
>gi|229075088|ref|ZP_04208089.1| Aspartate racemase [Bacillus cereus Rock4-18]
gi|228708019|gb|EEL60191.1| Aspartate racemase [Bacillus cereus Rock4-18]
Length = 227
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 5 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 52
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 53 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 112
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG++ T T+ FY +L E ++P ++ + HVI+
Sbjct: 113 EQNIK--------RIGLIGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVIL 160
>gi|390572113|ref|ZP_10252338.1| aspartate racemase [Burkholderia terrae BS001]
gi|389935901|gb|EIM97804.1| aspartate racemase [Burkholderia terrae BS001]
Length = 493
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 26/179 (14%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ A I +PC+ +HA+ + IP +++ + L+E+ E IGV
Sbjct: 314 LEEGDADIIAIPCNTAHAFVERIQPYLGIPIVNMLTETVRYLRESYPAQRE------IGV 367
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIG--- 278
LAT T+++G Y++ L++QG V P A V +EA+ +D G + G
Sbjct: 368 LATSGTIASGVYEKALESQGLRQVAPGPALQARV----MEAIYGKD--GVKAGFTTGQCQ 421
Query: 279 ------IQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-----KCIDPMDALARSTVTWA 326
++ L+ V +++G E+ +LP+ + + + IDP D LAR + +A
Sbjct: 422 EDIAAAVEGLIAEGVEIIVLGCTELPLLLPQSEFAGRNGARVRLIDPTDVLARQCIAYA 480
>gi|254456471|ref|ZP_05069900.1| aspartate racemase [Candidatus Pelagibacter sp. HTCC7211]
gi|207083473|gb|EDZ60899.1| aspartate racemase [Candidatus Pelagibacter sp. HTCC7211]
Length = 248
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 12/218 (5%)
Query: 85 IGIIGGVSVSSTLNFLGKL-VWYSAKDAEECPPFVVCNDPAL--NEELFHASVHSLKSK- 140
IGI+GG+ + L+F KL + K +E P F++ N + E SL +K
Sbjct: 2 IGILGGMGTQAGLDFCNKLAILNRGKIDQEYPLFLLYNKSNIPGRPESIGIQTRSLSNKS 61
Query: 141 TVQLDHIR-GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
T ++ I+ V ++L LE+ + IV+PC+ +H W D+ + +I +++ + V
Sbjct: 62 TNKVSKIKYNKVLKSLLRGCKLLEKNKCKFIVIPCNTAHYWFDDLQKKVNISIINMPKEV 121
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
K K+ +IG+LAT+ TL+ G Y N+ +++V P + + +
Sbjct: 122 FKFTKQ------NCKKNSKIGLLATEGTLNTGVYHN-FFNKNYDLVQPSQTLQKKSVNKA 174
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
I+ + +++ A ++ I LL +I+G E+
Sbjct: 175 IKLVKMGNVKAAAKAIKPAINSLLKMKCKKIILGCTEL 212
>gi|423365557|ref|ZP_17342990.1| aspartate racemase [Bacillus cereus VD142]
gi|401090290|gb|EJP98449.1| aspartate racemase [Bacillus cereus VD142]
Length = 227
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST ++Y + + N +L S+ + T+
Sbjct: 5 IGLIGGLSWESTS------LYYKHINTLTLSKY------DQNAKLVLYSMDFGEVTTLLQ 52
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E +GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 53 NHQYEEVKNELVAVAKKVEHSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 112
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY +L E ++P ++ + HVI+
Sbjct: 113 EQNIK--------RIGLLGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVIL 160
>gi|229103249|ref|ZP_04233932.1| Aspartate racemase [Bacillus cereus Rock3-28]
gi|228680088|gb|EEL34282.1| Aspartate racemase [Bacillus cereus Rock3-28]
Length = 227
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 5 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 52
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 53 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEIV 112
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY +L E ++P ++ + HVI+
Sbjct: 113 EQNIK--------RIGLLGTKQTMEQDFYTSRLAKYNIETLIPNDEERTFIHHVIL 160
>gi|423655446|ref|ZP_17630745.1| aspartate racemase [Bacillus cereus VD200]
gi|401292989|gb|EJR98639.1| aspartate racemase [Bacillus cereus VD200]
Length = 226
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V + SIP LH+G+ AK++
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKKMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY+ +L E ++P ++ + HVI+
Sbjct: 112 EQNIK--------RIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVIL 159
>gi|423517431|ref|ZP_17493912.1| aspartate racemase [Bacillus cereus HuA2-4]
gi|401163703|gb|EJQ71048.1| aspartate racemase [Bacillus cereus HuA2-4]
Length = 227
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
+E +GA C++M + H + +V + SIP LH+G+ AKE+ E +K RIG+
Sbjct: 70 VEHSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 121
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
L T T+ FY +L E ++P ++ + HVI+
Sbjct: 122 LGTKQTMEEDFYTSRLAKYNIETIIPNDEERTFIHHVIL 160
>gi|30020750|ref|NP_832381.1| aspartate racemase [Bacillus cereus ATCC 14579]
gi|229130822|ref|ZP_04259771.1| Aspartate racemase [Bacillus cereus BDRD-Cer4]
gi|29896302|gb|AAP09582.1| Aspartate racemase [Bacillus cereus ATCC 14579]
gi|228652627|gb|EEL08516.1| Aspartate racemase [Bacillus cereus BDRD-Cer4]
Length = 226
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 105/230 (45%), Gaps = 37/230 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V + SIP LH+G+ AK++
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKKMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPTI- 260
E +K RIG+L T T+ FY+ +L E ++P ++ + HVI+ +
Sbjct: 112 EQNIK--------RIGLLGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVILDELS 163
Query: 261 -----EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
E R ++ ++L++ G + +++G E+ ++ ++D
Sbjct: 164 RGIISETSKERLLQITKSLIQNGAE--------GILLGCTEIPLLISQND 205
>gi|331000797|ref|ZP_08324443.1| aspartate racemase [Parasutterella excrementihominis YIT 11859]
gi|329570325|gb|EGG52058.1| aspartate racemase [Parasutterella excrementihominis YIT 11859]
Length = 484
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 32/260 (12%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IGI+GG+ ++T++ K+ + AK+ +E V +P + +T
Sbjct: 241 IGIVGGLGPAATVDLYDKITKATPAKNDQEHIKVAVEQNP------------QIPDRTKY 288
Query: 144 LDHIRGAVSQNLRHKRAF--LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
L H G V L A LE+ IV+ C+ +HA+ + S+P +++ + +
Sbjct: 289 LLH--GGVDPTLSLYAACRKLEKDAVDAIVIACNTAHAYFETIVPHLSVPLINMQQVTLE 346
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA----TMEHVII 257
E+++ G V IG++ATD T+ G Y K ++ +V+PDK ME +
Sbjct: 347 EIRD------RFGPDVVIGLMATDGTIETGIYGRKAKSMKLAMVVPDKEHQAMVMEAIYG 400
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL-----KKCI 312
D LL+ L+ + A+I+G E+ +L + D + +
Sbjct: 401 EKGVKAGFTDGHCKEVLLKAAEHLVRDKGAQALILGCTELPLILEETDNIKLGDGHAAIV 460
Query: 313 DPMDALARSTVTWARSNKKL 332
DP +LAR V A K+
Sbjct: 461 DPTASLARRVVKVAGEITKI 480
>gi|221198449|ref|ZP_03571495.1| aspartate racemase [Burkholderia multivorans CGD2M]
gi|221208602|ref|ZP_03581603.1| aspartate racemase [Burkholderia multivorans CGD2]
gi|221171593|gb|EEE04039.1| aspartate racemase [Burkholderia multivorans CGD2]
gi|221182381|gb|EEE14782.1| aspartate racemase [Burkholderia multivorans CGD2M]
Length = 230
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 47/259 (18%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + + + N + + H H+ KS V
Sbjct: 2 KTIGLIGGMSWESSAEY-----------------YRLINR---HSKALHGGHHNAKSVLV 41
Query: 143 QLD----------HIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+D H A+ + + LE AGA +V+ + H H + ++PF
Sbjct: 42 TVDFAEIEALQRAHDWPALGERMADAARQLEAAGADLVVLTTNTMHRVHDAIEAAVTLPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPD--- 248
LH+ + L++A ++ R+ +L T T+ FY ++L+ + G +V++PD
Sbjct: 102 LHIADPTGAALRDAGVE--------RVALLGTRYTMELPFYAQRLRERFGIDVLVPDERE 153
Query: 249 KATMEHVIIPTI-EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPL 307
+A + +I + + R+ G +RI I+ L R AVI+G E+ ++ DD
Sbjct: 154 RADVHRIIYDELCHGIVARESRG--TYVRI-IESLAQRGAQAVILGCTEITLLIGTDDSP 210
Query: 308 LKKCIDPMDALARSTVTWA 326
L D A++ V WA
Sbjct: 211 L-PVFDTTALHAKAAVEWA 228
>gi|397652676|ref|YP_006493257.1| aspartate racemase [Pyrococcus furiosus COM1]
gi|393190267|gb|AFN04965.1| aspartate racemase [Pyrococcus furiosus COM1]
Length = 228
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 101/223 (45%), Gaps = 24/223 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAE--ECPPFVVCNDPALNEELFHASVHSLKSKTV 142
IG+IGG++ ST + K + S K E P ++ ++N F + + +
Sbjct: 4 IGLIGGMTPESTCYYYRKYIEISRKKFRKYEYPELLIY---SINFRDFFMNPEGWEGRKR 60
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
L + A LE+AGA I + + H D+ + S+P + + + VA+E
Sbjct: 61 ILINAAKA-----------LERAGAELIALTANTPHIVFDDIQKEISVPMVSIIDAVAEE 109
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
+ LK ++ +L T T+S+GFY L+N+G EVV+P++ E + E
Sbjct: 110 ILSHGLK--------KVLLLETKTTMSSGFYVNALKNKGLEVVVPNEEEQEELNRIIFEE 161
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
L +++ R ++ + + V VI+G E+ + + D
Sbjct: 162 LAFENLKSKRWIIDLIERYAKEEGVEGVILGCTELPLAVKRGD 204
>gi|423599992|ref|ZP_17575992.1| aspartate racemase [Bacillus cereus VD078]
gi|401234679|gb|EJR41157.1| aspartate racemase [Bacillus cereus VD078]
Length = 227
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 5 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 52
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E +GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 53 NHQYEEVKNELVAVAKKVEYSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 112
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY +L E ++P ++ + HVI+
Sbjct: 113 EQNIK--------RIGLLGTKQTMEEDFYTSRLAKYNIETIIPNNEERTFIHHVIL 160
>gi|421473271|ref|ZP_15921401.1| aspartate racemase [Burkholderia multivorans ATCC BAA-247]
gi|400221356|gb|EJO51816.1| aspartate racemase [Burkholderia multivorans ATCC BAA-247]
Length = 230
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 47/259 (18%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + + + N + + H H+ KS V
Sbjct: 2 KTIGLIGGMSWESSAEY-----------------YRLINR---HSKALHGGHHNAKSVLV 41
Query: 143 QLD----------HIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+D H A+ + + LE AGA +V+ + H H + ++PF
Sbjct: 42 TVDFAEIEALQRAHDWPALGERMADAARQLEAAGADLVVLTTNTMHRVHDAIEAAVTLPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKAT 251
LH+ + L++A ++ R+ +L T T+ FY ++L+ + G +V++PD+
Sbjct: 102 LHIADPTGAALRDAGVE--------RVALLGTRYTMELPFYAQRLRERFGIDVLVPDERE 153
Query: 252 MEHVIIPTIEALNH----RDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPL 307
V + L H R+ G +RI I+ L R AVI+G E+ ++ DD
Sbjct: 154 RADVHRIIYDELCHGIIARESRG--TYVRI-IESLAQRGAQAVILGCTEITLLIGTDDSP 210
Query: 308 LKKCIDPMDALARSTVTWA 326
L D A++ V WA
Sbjct: 211 L-PVFDTTALHAKAAVEWA 228
>gi|423384167|ref|ZP_17361423.1| aspartate racemase [Bacillus cereus BAG1X1-2]
gi|423529455|ref|ZP_17505900.1| aspartate racemase [Bacillus cereus HuB1-1]
gi|401640776|gb|EJS58504.1| aspartate racemase [Bacillus cereus BAG1X1-2]
gi|402448884|gb|EJV80723.1| aspartate racemase [Bacillus cereus HuB1-1]
Length = 226
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 4 IGLIGGLSWESTSLYYKHINTLTLSQYDQ------------NAKLVLYSMDFGEVTTLLQ 51
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E++GA C++M + H + +V + SIP LH+G+ AKE+
Sbjct: 52 NHQYEEVKNELVTVAKKVEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMV 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY+ +L + ++P ++ + HVI+
Sbjct: 112 EQNIK--------RIGLLGTKQTMEQDFYKSRLAKYNIKTIIPNEEERTFIHHVIL 159
>gi|295701003|ref|YP_003608896.1| aspartate racemase [Burkholderia sp. CCGE1002]
gi|295440216|gb|ADG19385.1| aspartate racemase [Burkholderia sp. CCGE1002]
Length = 233
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 30/171 (17%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEE---LFHASVHSLKSK 140
IGI+GG+ +T++F+ K+V + A +E P +V N P + + + L +
Sbjct: 4 IGILGGMGPLATVDFMDKIVRLTHANSDQEHLPLLVANLPHIEDRSSAIIDGGADPLPAL 63
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE-CV 199
+D L + G I +PC+ +H W+ + P LH+ + CV
Sbjct: 64 LDGID---------------LLNRNGVGLIAIPCNSAHHWYEPMRARSKAPVLHIAQTCV 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
A + A+ R+ +LAT L +GFYQ+ L + E VLPD++
Sbjct: 109 AAVPRAAR----------RVALLATGGALVSGFYQQALADLDIEPVLPDES 149
>gi|171315873|ref|ZP_02905103.1| aspartate racemase [Burkholderia ambifaria MEX-5]
gi|171098969|gb|EDT43757.1| aspartate racemase [Burkholderia ambifaria MEX-5]
Length = 500
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 45/262 (17%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCND--PALNEELFHASVHSLKSK 140
IG++GGV ++T++FL K+V + A+D + V N P E L
Sbjct: 249 IGVVGGVGPAATVDFLDKIVRNTPAARDQDHIKLLVEQNPQIPDRTENLVGGGADP---- 304
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
+S K+ LE A I +PC+ +HA+ + IP +++
Sbjct: 305 ---------TISLYATCKK--LEDGDADVIAIPCNTAHAFVEWIQPWLGIPIINMLTVTV 353
Query: 201 KELKEA--KLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIP 258
L++ L+ ++GVLAT T+ +G YQ+ L++QG V P A V
Sbjct: 354 AHLRDTYPALR--------QVGVLATSGTIQSGVYQKALESQGLRQVAPAPALQARV--- 402
Query: 259 TIEAL--NHRDMEG---ARNLLRIG--IQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK- 310
+EA+ H G R IG I L+ V+ +++G E+ +LP + + +
Sbjct: 403 -MEAIYGTHGVKAGFTTGRCEEDIGAAIDALMDEGVSVIVLGCTELPILLPGGEYVARNG 461
Query: 311 ----CIDPMDALARSTVTWARS 328
+DP D LAR+ + +A S
Sbjct: 462 RRATLVDPTDVLARTCIGYAMS 483
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 159 RAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVR 218
RAF E+ G +V+PC +SH + ++ S+P + + E V ++ + R
Sbjct: 75 RAF-EKRGVTTVVLPCFLSHTFIDELKANTSLPIVDIVEAVRSHVRR------KYPDATR 127
Query: 219 IGVLATDATLSAGFYQEKLQNQGFEVVLP 247
IGVLA+D + + FE+V P
Sbjct: 128 IGVLASDYVRDRRLFDAYFTSPPFEIVYP 156
>gi|392550041|ref|ZP_10297178.1| aspartate racemase [Pseudoalteromonas spongiae UST010723-006]
Length = 231
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 48/239 (20%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK--- 140
TIG++GG+S STLN+ A+N+ + A++ L S
Sbjct: 3 TIGLLGGMSWESTLNYY----------------------KAINQGV-KAALGGLNSAEIL 39
Query: 141 --TVQLDHI----RGAVSQNLRHKRAF----LEQAGARCIVMPCHISHAWHGDVSEGCSI 190
+V DHI R Q + A LE AGA C+++ + H + E SI
Sbjct: 40 LYSVNFDHIEKLQRAGEWQKMGDMLAKSAQDLEAAGAHCLLICTNTMHKVAHQIEENISI 99
Query: 191 PFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDK 249
P LH+ + A +L + + R+G+L T T+ GFY+ +L + G +V++P++
Sbjct: 100 PLLHIADATAAQLIQDDIS--------RVGLLGTAFTMEQGFYKNRLTERFGIDVIVPNQ 151
Query: 250 ATME--HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDP 306
+ H +I L ++E L I I L + A+I+G E+ ++ ++D
Sbjct: 152 EDRDCVHSVIYNELCLGEINLESKERYLAI-INKLHRQGAQAIILGCTEIALLVSQNDT 209
>gi|387902681|ref|YP_006333020.1| Aspartate racemase [Burkholderia sp. KJ006]
gi|387577573|gb|AFJ86289.1| Aspartate racemase [Burkholderia sp. KJ006]
Length = 230
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 104/257 (40%), Gaps = 43/257 (16%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + + YS + H H+ KS V
Sbjct: 2 KTIGLIGGMSWESSAEYYRMINRYS--------------------KALHGGHHNAKSVLV 41
Query: 143 QLDHIRGAVSQNLRHKRAF----------LEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+D Q + RA LE AGA IV+ + H H + ++PF
Sbjct: 42 TVDFAEIEALQRAQDWRALGERMADAARRLEAAGADLIVLTTNTMHRVHDAIEAAVTLPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKAT 251
LH+ + L+ A ++ R+ +L T T+ FY ++L+++ G +V +PD+
Sbjct: 102 LHIADPTGNALRAAGVE--------RVALLGTRYTMELPFYAQRLRDRFGLDVRVPDEPA 153
Query: 252 MEHVIIPTIEALNHRDMEGARNLLRIG-IQLLLVRAVNAVIIGSDEMQGVL-PKDDPLLK 309
V + L H ++ + I L R AVI+G E+ ++ D PL
Sbjct: 154 RADVHRIIYDELCHGRIDAQSRATYVAIIDELARRGAQAVILGCTEITLLIGDADSPL-- 211
Query: 310 KCIDPMDALARSTVTWA 326
D A++ V WA
Sbjct: 212 PVFDTTTLHAKAAVEWA 228
>gi|18978047|ref|NP_579404.1| aspartate racemase [Pyrococcus furiosus DSM 3638]
gi|18893834|gb|AAL81799.1| putative aspartate racemase [Pyrococcus furiosus DSM 3638]
Length = 231
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 101/223 (45%), Gaps = 24/223 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAE--ECPPFVVCNDPALNEELFHASVHSLKSKTV 142
IG+IGG++ ST + K + S K E P ++ ++N F + + +
Sbjct: 7 IGLIGGMTPESTCYYYRKYIEISRKKFRKYEYPELLIY---SINFRDFFMNPEGWEGRKR 63
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
L + A LE+AGA I + + H D+ + S+P + + + VA+E
Sbjct: 64 ILINAAKA-----------LERAGAELIALTANTPHIVFDDIQKEISVPMVSIIDAVAEE 112
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
+ LK ++ +L T T+S+GFY L+N+G EVV+P++ E + E
Sbjct: 113 ILSHGLK--------KVLLLETKTTMSSGFYVNALKNKGLEVVVPNEEEQEELNRIIFEE 164
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
L +++ R ++ + + V VI+G E+ + + D
Sbjct: 165 LAFENLKSKRWIIDLIERYAKEEGVEGVILGCTELPLAVKRGD 207
>gi|373498909|ref|ZP_09589406.1| aspartate racemase [Fusobacterium sp. 12_1B]
gi|371960032|gb|EHO77701.1| aspartate racemase [Fusobacterium sp. 12_1B]
Length = 230
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 54/183 (29%)
Query: 84 TIGIIGGVSVSSTLNFL----------------GKLVWYSA--KDAEECPPFVVCNDPAL 125
TIG+IGG+S ST+ + GKLV +S ++ EEC N A
Sbjct: 3 TIGLIGGMSWESTVTYYEIINRTIKEKLGGLHSGKLVLFSVDFQEIEECQAKGEWNKSA- 61
Query: 126 NEELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVS 185
++ + SL E+AGA IV+ + H D+
Sbjct: 62 --KILTEAAQSL-------------------------EKAGADFIVICTNTMHKIAPDIQ 94
Query: 186 EGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVV 245
+ +IP LH+ E A EL + ++K ++ +L T T+ FY+ KL ++G EVV
Sbjct: 95 KNINIPILHIAEATADELDKKEIK--------KVALLGTKYTMEQDFYKNKLIDRGIEVV 146
Query: 246 LPD 248
+PD
Sbjct: 147 IPD 149
>gi|423455146|ref|ZP_17431999.1| aspartate racemase [Bacillus cereus BAG5X1-1]
gi|423472718|ref|ZP_17449461.1| aspartate racemase [Bacillus cereus BAG6O-2]
gi|401134929|gb|EJQ42536.1| aspartate racemase [Bacillus cereus BAG5X1-1]
gi|402427279|gb|EJV59388.1| aspartate racemase [Bacillus cereus BAG6O-2]
Length = 234
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 111/254 (43%), Gaps = 36/254 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
+GIIGG+ +T++ + K++ Y+ PA+ ++ +H + Q+
Sbjct: 5 VGIIGGMGPLATVDLMNKIISYT---------------PAMKDQ---DHIHIIADNYSQI 46
Query: 145 DHIRGAV-------SQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
A+ + + L+ AGA +V+ C+ +H ++ +IP LH+
Sbjct: 47 PDRTTAILGKGMDPTPYIVQSAQRLQNAGADFLVIACNTAHFFYKAAKRSVNIPILHMPL 106
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
A+ +++ + ++G+LATD T+ YQ Q+ +V+ PDK M+ ++
Sbjct: 107 ETARFVQKNNFR--------KVGLLATDGTIKTELYQNSCQSCRIDVIEPDKE-MQEKVM 157
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I A+ ++E L + L A+I G E+ VL + + IDP +
Sbjct: 158 EGIYAIKSGNLEKGFLYLSMVADKLKDSGAEAIIAGCTEVPLVLKSSENIC--VIDPTEI 215
Query: 318 LARSTVTWARSNKK 331
+A+ + A +K
Sbjct: 216 VAKMVIKIANRTEK 229
>gi|390570670|ref|ZP_10250930.1| aspartate racemase [Burkholderia terrae BS001]
gi|420252331|ref|ZP_14755461.1| aspartate racemase [Burkholderia sp. BT03]
gi|389937368|gb|EIM99236.1| aspartate racemase [Burkholderia terrae BS001]
gi|398055584|gb|EJL47646.1| aspartate racemase [Burkholderia sp. BT03]
Length = 234
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ GA +++ + H H + ++PFLH+ + + L+ A ++ R+G+
Sbjct: 71 LERGGADIVLLATNTMHRVHEAIEAAIAVPFLHIADPTGEALRAAGIE--------RVGL 122
Query: 222 LATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPTIEALNHRDME-GARNLLRIGI 279
L T T+ FY +L+ + G + ++PD HV + L H ++E +R + + I
Sbjct: 123 LGTRYTMEQTFYAGRLRERFGLDTLIPDDEGRAHVHRIIYDELCHGNIEPSSRAIYQNVI 182
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWA 326
+ L R AVI+G E+ ++ ++D L D A+ V WA
Sbjct: 183 EDLKARGAQAVILGCTEITLLIRQEDSAL-PVFDTTALHAQKAVDWA 228
>gi|115360958|ref|YP_778095.1| aspartate racemase [Burkholderia ambifaria AMMD]
gi|115286286|gb|ABI91761.1| aspartate racemase [Burkholderia ambifaria AMMD]
Length = 484
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 114/264 (43%), Gaps = 45/264 (17%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCND--PALNEELFHASVHSLKSK 140
IG++GGV ++T++FL K+V + ++D + V N P E L A
Sbjct: 248 IGVVGGVGPAATVDFLDKIVRNTPASRDQDHIKLLVEQNPQIPDRTENLVGAGADP---- 303
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
+S K+ LE A I +PC+ +HA+ + IP +++
Sbjct: 304 ---------TISLYATCKK--LEDGDADIIAIPCNTAHAFVERIQPWLRIPIVNMLSVTV 352
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
L++ E +GVLAT T+ +G Y++ L++QG V P A V +
Sbjct: 353 AHLRDTYPALQE------VGVLATSGTIESGVYRKALESQGLRQVAPAPALQARV----M 402
Query: 261 EALNHRDMEGARNLLRIG---------IQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK- 310
EA+ +G + G I L+ V+ +++G E+ +LP D+ + +
Sbjct: 403 EAIYG--AQGVKAGFTTGQCEEDIGAAIDALMDEGVSVIVLGCTELPILLPGDEYVGRNG 460
Query: 311 ----CIDPMDALARSTVTWARSNK 330
+DP D LAR+ + A + +
Sbjct: 461 RRATLVDPTDVLARTCIAHAMAAR 484
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 15/185 (8%)
Query: 159 RAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVR 218
RAF E+ G +V+PC +SH + ++ +P + + E V ++ + R
Sbjct: 74 RAF-EKRGVTTVVLPCFLSHTFIDELKANTRLPIVDIVEAVRSHVRR------KYPDATR 126
Query: 219 IGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPTIEALNHRDMEG-ARNL 274
IGVLA+D ++ FEVV P D + I + + ++ G L
Sbjct: 127 IGVLASDYVRGKRLFEAYFPTPQFEVVHPRPCDGIDLVTEAIYGADGIKRGNLRGRPVEL 186
Query: 275 LRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVT----WARSNK 330
LR + L + V ++ G E+ V + P +D A A+ VT W +
Sbjct: 187 LRRACEDLADQGVQVIVPGLTEIALVADEIGPQRVPLVDSNLAYAQYAVTGQSGWRAATF 246
Query: 331 KLTLL 335
K+ ++
Sbjct: 247 KIGVV 251
>gi|420251564|ref|ZP_14754728.1| aspartate racemase [Burkholderia sp. BT03]
gi|398057445|gb|EJL49406.1| aspartate racemase [Burkholderia sp. BT03]
Length = 493
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 26/179 (14%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ A I +PC+ +HA+ + IP +++ + L+E+ E IGV
Sbjct: 314 LEEGDADIIAIPCNTAHAFVERIQPYLGIPIVNMLTETVRYLRESYPAQRE------IGV 367
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIG--- 278
LAT T+++G Y++ L++QG V P A V +EA+ +D G + G
Sbjct: 368 LATSGTIASGVYEKALESQGLRQVAPGPALQARV----MEAIYGKD--GVKAGFTTGQCQ 421
Query: 279 ------IQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-----KCIDPMDALARSTVTWA 326
++ L+ V +++G E+ +LP + + + IDP D LAR + +A
Sbjct: 422 EDIAAAVEGLIAEGVEIIVLGCTELPLLLPHSEFTGRNGARVRLIDPTDVLARQCIAYA 480
>gi|398887958|ref|ZP_10642509.1| aspartate racemase [Pseudomonas sp. GM55]
gi|398191602|gb|EJM78787.1| aspartate racemase [Pseudomonas sp. GM55]
Length = 506
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 115/254 (45%), Gaps = 27/254 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GI+GGV ++T++F+GK+V ++ A +E VV +P + + ++ +
Sbjct: 254 LGIVGGVGPAATVDFMGKVVAHTPAGRDQEHIKMVVEQNPQIPD----------RTANLL 303
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
D ++ KR LE AGA I +PC+ +HA+ + +P +++ E
Sbjct: 304 YDETDPTMAMYATCKR--LESAGANAIAIPCNTAHAFVERIQAHLRVPIVNM----LTET 357
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP--DKATMEHVIIPTIE 261
+A ++ G+G +G+LAT T+ + Y E + G +++ P D + I
Sbjct: 358 VDAIVQ--RYGAGKSVGLLATSGTIKSQVYHEAARQAGLQLITPGMDYQALVMESIYGDH 415
Query: 262 ALNHRDMEG-ARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK-----CIDPM 315
+ EG ++ L ++ L + +I+G E+ VL + + K +DP
Sbjct: 416 GIKAGFTEGICKDQLLTAVEHLCELGADVLILGCTELPLVLEHSESYMIKNHEIALVDPT 475
Query: 316 DALARSTVTWARSN 329
LA + AR N
Sbjct: 476 TILALKCIELAREN 489
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 27/172 (15%)
Query: 82 ANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
A +GI+GG+ + + KLV A V D LF H K
Sbjct: 14 ARKLGIVGGLGSLAGGDLFYKLVKSRA----------VLEDQGRYHFLFEQ--HPFKDVL 61
Query: 142 VQLDHIRGAVSQNLRHKRAF-----LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
+ LD +GA S R F E + +++PC SH + ++ E IP L +
Sbjct: 62 MPLD--QGA-SMTSRKFYVFQVCQTFEASEVNAVLLPCFASHTFREEIQEEIGIPVLDMM 118
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
+ K + A G +G++A+D +G ++ N F++V P+
Sbjct: 119 AALRKHINHV------AEHGSTLGIIASDYVRHSGLFERYFGND-FKLVYPN 163
>gi|261822403|ref|YP_003260509.1| aspartate racemase [Pectobacterium wasabiae WPP163]
gi|261606416|gb|ACX88902.1| aspartate racemase [Pectobacterium wasabiae WPP163]
Length = 236
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 22/214 (10%)
Query: 93 VSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASV--HSLKSKTVQLDHIR 148
VS TL +G + W S P + + N+ N+ L A + HS+ ++ +
Sbjct: 2 VSKTLGLIGGMSWEST-----IPYYRIINEYVKNQLGGLHSAKIILHSVDFHEIEQLQSQ 56
Query: 149 GAVSQN---LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKE 205
G +Q L + L QAGA IV+ + H DV +P LH+ + LK+
Sbjct: 57 GDWAQAAAVLGNIAVGLRQAGADAIVICTNTMHKVADDVERASQLPLLHIADATGASLKQ 116
Query: 206 AKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPTIEALN 264
LK ++G+L T T+ FY++++Q + G +V++PD+A E V + L
Sbjct: 117 HGLK--------KVGLLGTRYTMEQDFYRQRIQERFGVDVIVPDQAGKEAVNRIIYDELC 168
Query: 265 HRDMEGARNLLRIG-IQLLLVRAVNAVIIGSDEM 297
++ L+ G IQ L + +I+G E+
Sbjct: 169 LGNINDTSRLVYRGIIQQLEQQGAEGIILGCTEI 202
>gi|403050553|ref|ZP_10905037.1| aspartate racemase [Acinetobacter bereziniae LMG 1003]
Length = 229
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 42/258 (16%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG++GG+S ST + +L + ++ ++L +HS K +
Sbjct: 2 KTIGLLGGMSWESTDLYYQQL------------------NKSVQQKL--GKLHSAKVVLI 41
Query: 143 QLDHIRGAVSQN----------LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+D + Q L+ K LEQAGA I++ + H + SIPF
Sbjct: 42 SVDFAEIEILQRQGLWEDAGIYLKEKAVQLEQAGAEGILLCTNTMHKVASYIEHSISIPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA-- 250
+H+ + AKE+ ++ ++G+L T T+ FY+++L+ QG V++P +A
Sbjct: 102 IHIADATAKEILNQNIR--------KVGLLGTRFTMEQDFYKQRLEQQGINVLIPHQAHR 153
Query: 251 TMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK 310
+ H II L + + ++I QL+L +I+G E+ +L D P
Sbjct: 154 KIVHDIIYDELCLGVINELSRQKYIQIVEQLIL-EGAEGIILGCTEI-CMLIGDTPFSVP 211
Query: 311 CIDPMDALARSTVTWARS 328
D ++ V +A S
Sbjct: 212 LFDTTSIHTQAAVDFALS 229
>gi|366089853|ref|ZP_09456219.1| aspartate racemase [Lactobacillus acidipiscis KCTC 13900]
Length = 239
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 114/250 (45%), Gaps = 36/250 (14%)
Query: 87 IIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQLD 145
IIGG+ S+T ++ +L + A ++ +++ N HA+V LD
Sbjct: 7 IIGGMGTSATETYIHQLNERTPANSDQDYLNYILVN---------HATVPDRTDYI--LD 55
Query: 146 HIRGAVSQNLRHKRAFLEQAGAR--CIVMPCHISHAWHGDVSEGCSIPFLHVG----ECV 199
H + + L F +QA + +PC+ +H ++ ++++ IP LH+ + +
Sbjct: 56 HTKPSPLTPLL--EDFKQQAALKPDFFTLPCNTAHYFYDELTKVTDIPILHMPREAVKWI 113
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEH---VI 256
+K+L AK R+G+++T+ T + Y +++Q+ G+E+VLPD + +I
Sbjct: 114 SKKLPTAK----------RVGLISTEGTRADHIYDDEIQSAGYELVLPDDKIQQQTTELI 163
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
++ NH D +LR Q+ + + + V++G E+ ++ + D
Sbjct: 164 YGNVKEKNHVDRTLYHEILR---QMFVEKGCDTVVLGCTELSLAQEREPYTMHPVTDSQS 220
Query: 317 ALARSTVTWA 326
L T+ A
Sbjct: 221 ILVDKTIELA 230
>gi|227513566|ref|ZP_03943615.1| aspartate racemase [Lactobacillus buchneri ATCC 11577]
gi|227083439|gb|EEI18751.1| aspartate racemase [Lactobacillus buchneri ATCC 11577]
Length = 242
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 26/253 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
N IIGG+ +T F+ L + AK +E +++ N + + + HS +
Sbjct: 3 NFFTIIGGMGTEATELFIHILNERTPAKKDQEYLNYILVNHSTIPDRTDYILNHSKPNPF 62
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+ L +++++ + Q V+PC+ +H D+ S+P LH+ K
Sbjct: 63 IPL-------AEDIKQQ----SQLDPDFFVIPCNTAHYSFDDLQALTSVPILHMPRETVK 111
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA----TMEHVII 257
E+K + S R+G++AT TL G Y +++++ G+++V PD+ TME +I
Sbjct: 112 EIKH------DVPSAKRVGLIATRGTLHDGIYDQEIRHAGYDLVKPDEKTANQTME-LIY 164
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I+ N D + +L + + + VI+G E+ + ID
Sbjct: 165 DDIKEKNQVDGDLYHQILSTMVNKF---SCDVVILGCTELSVAQQRAGDHSFPVIDAQTV 221
Query: 318 LARSTVTWARSNK 330
LA+ T+ A N+
Sbjct: 222 LAKRTIELALKNR 234
>gi|374855845|dbj|BAL58700.1| aspartate racemase [uncultured candidate division OP1 bacterium]
Length = 238
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 36/267 (13%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAK--DAEECPPFVVCNDPALNEELFHASVHSLKSK 140
IGI+GG+ ++T+ ++V + D + P + N + F +
Sbjct: 2 RVIGILGGMGPAATVELFRRIVLKTPAHCDQDHIPVLIDSNPKIPDRGSFLLAGGP---- 57
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
R A+ ++ R LE+ GA +VMPC+ +HA+ + E IPF+ + A
Sbjct: 58 -----DPRPALCRSARK----LERLGASFLVMPCNTAHAFLPSLREAVHIPFIDMIAETA 108
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
+ ++E+ R+G+LAT+ T+ Y + G EV+ P D+A + +I
Sbjct: 109 RAIRES-----------RVGLLATETTIRTRLYHDACAAYGIEVITPFSDDQARVMEIIY 157
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
A+ R L I + L R A+++G E+ V+P+ D D +D
Sbjct: 158 ----AIKGGACGFTRELQAIAAR-LRERGARALVVGCTELSLVVPQGD-FAGPVYDALDI 211
Query: 318 LARSTVTWARSNKKLTLLLDSQSSAKQ 344
LA + V A + L L D+ +A +
Sbjct: 212 LAEAAVRQA-LHPHLRLARDAPQAAAR 237
>gi|254514559|ref|ZP_05126620.1| aspartate racemase [gamma proteobacterium NOR5-3]
gi|219676802|gb|EED33167.1| aspartate racemase [gamma proteobacterium NOR5-3]
Length = 237
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 116/259 (44%), Gaps = 39/259 (15%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSL 137
+ + T+GI+GG+ ++T++ + +++ + A D + +V N+P + +
Sbjct: 1 MTTSKTVGILGGMGPAATVDLMQRIIAATPAADDIDHIRMLVDNNPKVPSRM-------- 52
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
+D + + LR L GA + MPC+ +H ++ +VS G IPFL++ E
Sbjct: 53 ---KALVDKNGPSPAPVLRAMARQLRDQGADLLAMPCNTAHHYYDEVSAGVDIPFLNMME 109
Query: 198 CVAKELKEAKLKPLEAGSGV-RIGVLATDATLSAGFYQEKLQNQGFEVVLP--DKATMEH 254
V+ + AK +P GV R+G+LA+ A Y+ G EVV P +K
Sbjct: 110 LVSSHI--AKHQP-----GVQRVGLLASSALSQIRLYEPWFDALGVEVVYPPAEKQRALM 162
Query: 255 VIIPTIEALNHRDMEG-------ARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPL 307
+I I+A N D G A L +G+ LL+ +I S +++ LP
Sbjct: 163 ALIVAIKA-NAGDALGFAALQDCAETLETLGVDCLLIACTELSVI-SQQLKTPLPS---- 216
Query: 308 LKKCIDPMDALARSTVTWA 326
D D LAR V A
Sbjct: 217 ----YDAADILAREVVIQA 231
>gi|187924576|ref|YP_001896218.1| aspartate racemase [Burkholderia phytofirmans PsJN]
gi|187715770|gb|ACD16994.1| aspartate racemase [Burkholderia phytofirmans PsJN]
Length = 232
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 150 AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLK 209
A+ Q + LE+ GA +++ + H + + +PFLH+ + L+ A ++
Sbjct: 59 ALGQQMADAARQLERGGADLVMLATNTMHRVYESIEAAIDVPFLHIADPTGSALRAAGIE 118
Query: 210 PLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPTIEALNHRDM 268
R+G+L T T+ FY +L+ + G E V+PD+A V + L H ++
Sbjct: 119 --------RVGLLGTRYTMEQTFYTGRLRERYGLETVIPDEAERADVHRIIYDELCHGNV 170
Query: 269 -EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWA 326
+ +R + + I+ L R AVI+G E+ ++ +D L D A++ V WA
Sbjct: 171 NDASRAVYQRVIEALAARGAQAVILGCTEITLLIKAEDSAL-PVFDTTALHAQAAVEWA 228
>gi|320332988|ref|YP_004169699.1| aspartate racemase [Deinococcus maricopensis DSM 21211]
gi|319754277|gb|ADV66034.1| aspartate racemase [Deinococcus maricopensis DSM 21211]
Length = 243
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 21/170 (12%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
T+G++GG+ +TL+F K++ S A+ ++ ++ N+P + + +
Sbjct: 3 RTVGVLGGLGPDATLDFFAKVLRASRAEREQDHLRLLIDNNPQVPDRNAALTGRGASPGP 62
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
RG LE AGA +VM C+ +HA+ D+ +PF+ +
Sbjct: 63 ALAGMARG------------LEAAGADFLVMVCNTAHAYQADIEAAVRVPFVSL------ 104
Query: 202 ELKEAKLKPLEAGSGVR-IGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
+ E L A G R +G+LAT L AG YQ G ++ PD A
Sbjct: 105 -IDETVHATLRAVPGARAVGLLATTTCLDAGLYQRAFAPHGVRMIEPDAA 153
>gi|225574246|ref|ZP_03782856.1| hypothetical protein RUMHYD_02310 [Blautia hydrogenotrophica DSM
10507]
gi|225038536|gb|EEG48782.1| aspartate racemase [Blautia hydrogenotrophica DSM 10507]
Length = 236
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 21/216 (9%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIGI+GG+ +T + K++ + D ++ V + + A +H +
Sbjct: 3 KTIGIVGGMGPLATCDLYQKIIQVTQADKDQEHVRVCIDGNTRIPDRTAAILHKGRDPLP 62
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
Q+ I+ AV LE GA ++MPC+ +H ++ + IPFL++ E E
Sbjct: 63 QM--IKSAVR---------LEGMGADVLIMPCNTAHYFYKKLLPFVDIPFLNMLE----E 107
Query: 203 LKEAKLKPLEAGSGV-RIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
+A +K G+ + G+LATD T+ +G Y++ Q +G + LP K E V+ +
Sbjct: 108 TADAAVK-----MGITKAGLLATDGTVKSGVYEKAFQERGISLELPAKEEQESVMELIYD 162
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
+ + + LL R +++G E+
Sbjct: 163 GVKAGNYSLDTKKFERAMDKLLQRGAQVLVLGCTEL 198
>gi|448610748|ref|ZP_21661415.1| aspartate racemase [Haloferax mucosum ATCC BAA-1512]
gi|445744432|gb|ELZ95910.1| aspartate racemase [Haloferax mucosum ATCC BAA-1512]
Length = 246
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 104/238 (43%), Gaps = 35/238 (14%)
Query: 77 SLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHS 136
+L+ TIGI+GG+S ST+ + Y D+E +N+ L
Sbjct: 6 DVLDDPRTIGILGGMSSQSTVEY------YRYIDSE------------INDRLGGHHAGD 47
Query: 137 LKSKTVQLDHIRGAVSQN--------LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGC 188
+ ++V I+G + L LE AGA +++ + H +++
Sbjct: 48 IVIRSVNFADIKGFIQSEQWDEAGAYLAAAAHDLEAAGADFVLLATNTMHKVAPSITDAL 107
Query: 189 SIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
++PF+H+ + A ++ A L +GVL T AT+ FY+++ + G ++V+PD
Sbjct: 108 AVPFVHIVDVAADAIRAAGLDT--------VGVLGTQATMQEDFYRDRFADHGIDLVVPD 159
Query: 249 KATMEHVIIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
K V E L D+ + +R+ I L+ +++G E++ ++ + D
Sbjct: 160 KEHCPEVDRIIFEELTKGDICDDSRDYYLDAIDALVADGAEGIVLGCTEIELLVNQSD 217
>gi|385210165|ref|ZP_10037033.1| aspartate racemase [Burkholderia sp. Ch1-1]
gi|385182503|gb|EIF31779.1| aspartate racemase [Burkholderia sp. Ch1-1]
Length = 503
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 114/276 (41%), Gaps = 69/276 (25%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
+G++GGV ++T++F+ KLV N PA ++
Sbjct: 243 VGVLGGVGPAATVDFMAKLVR---------------NTPAACDQ---------------- 271
Query: 145 DHIRGAVSQN--------------------LRHKRAFLEQAGARCIVMPCHISHAWHGDV 184
DHI+ V QN L LE GA I +PC+ +HA+ +
Sbjct: 272 DHIKIMVEQNPQIPDRTAALLGNGEDPTLALYAACRTLEDGGADLIAIPCNTAHAFVERI 331
Query: 185 SEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVR-IGVLATDATLSAGFYQEKLQNQGFE 243
IP +++ C A L+E G+R +GVLAT TL++ Y++ L+ +GF
Sbjct: 332 QPSLGIPIVNMLTCTADYLRETF-------PGLREVGVLATTGTLASRVYEQSLEARGFV 384
Query: 244 VVLPD---KATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGV 300
+ P +A + H + A + L + L+ + V +++G E+ +
Sbjct: 385 QIAPGEQAQARLMHAVYGPKGAKAGFTSGECCDDLAAAVDDLIAQGVQVIVLGCTELP-L 443
Query: 301 LPKDDPL------LKKCIDPMDALARSTVTWARSNK 330
L +D L + + +DP + LA+ V +A +
Sbjct: 444 LLRDAMLACAAGRVVRLVDPTEVLAKRCVAYALGER 479
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 159 RAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVR 218
RAF E+ G IV+PC +SH + ++S ++P ++ ++ ++ A S R
Sbjct: 69 RAF-EKRGVEAIVLPCFLSHTFIDELSANVAVPVANIMTALSAYVRRAF------PSVRR 121
Query: 219 IGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIG 278
IGVL +DA G ++ F+V+ P + + + D EG RN G
Sbjct: 122 IGVLTSDAIRDNGLFERYFDAAQFDVLHPRNEAGFDCVTSAV----YSD-EGIRNGCLYG 176
Query: 279 IQLLLVRAVNAVII 292
+ L+RA A +I
Sbjct: 177 RPVELLRAACADLI 190
>gi|206560577|ref|YP_002231342.1| putative racemase [Burkholderia cenocepacia J2315]
gi|444356909|ref|ZP_21158513.1| aspartate racemase [Burkholderia cenocepacia BC7]
gi|444370005|ref|ZP_21169703.1| aspartate racemase [Burkholderia cenocepacia K56-2Valvano]
gi|198036619|emb|CAR52516.1| putative racemase [Burkholderia cenocepacia J2315]
gi|443598212|gb|ELT66589.1| aspartate racemase [Burkholderia cenocepacia K56-2Valvano]
gi|443606847|gb|ELT74596.1| aspartate racemase [Burkholderia cenocepacia BC7]
Length = 230
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 104/256 (40%), Gaps = 41/256 (16%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + + +S + H H+ KS V
Sbjct: 2 KTIGLIGGMSWESSAEYYRMINRHS--------------------KALHGGHHNAKSVLV 41
Query: 143 QLD----------HIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+D H A+ + + LE AGA +V+ + H H + ++PF
Sbjct: 42 TVDFADIEALQRTHDWAALGERMADAARQLEAAGADLVVLTTNTMHRVHDAIEAAVTLPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKAT 251
LH+ + L+ A ++ R+ +L T T+ FY +L+ + G +V++PD+
Sbjct: 102 LHIADPTGSALRAAGVE--------RVALLGTRYTMELPFYAARLREKFGLDVLVPDEPG 153
Query: 252 MEHVIIPTIEALNHRDMEGARNLLRIG-IQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK 310
+ V + L H + + I L R AVI+G E+ ++ DD L
Sbjct: 154 RDDVHRIIYDELCHGVISAQSRATYVSIIDALATRGAQAVILGCTEITLLIGADDSPL-P 212
Query: 311 CIDPMDALARSTVTWA 326
D A++ V WA
Sbjct: 213 VFDTTALHAKAAVEWA 228
>gi|420157707|ref|ZP_14664536.1| aspartate racemase [Clostridium sp. MSTE9]
gi|394755758|gb|EJF38946.1| aspartate racemase [Clostridium sp. MSTE9]
Length = 237
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 100/244 (40%), Gaps = 55/244 (22%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL--FHA------SVH 135
TIG+IGG+S ST+ + + V N+ +N+EL H+ SV
Sbjct: 10 TIGLIGGMSWESTVTY-----------------YQVINE-IVNQELGGLHSAKILLYSVD 51
Query: 136 SLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ + Q D + L LE+AGA IV+ + H V IP LH+
Sbjct: 52 FAEIEKCQADGDWDKSADILSAAARNLEKAGADFIVICTNTMHKVAPQVQSKIGIPILHI 111
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
E A ELK + + +L T T++ FY+EKL G V++PD+ +E V
Sbjct: 112 AEATADELKRCNITT--------VALLGTKYTMTQDFYKEKLTRAGITVLIPDEQEIETV 163
Query: 256 -----------IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD 304
II I +RD+ I+ L R VI+G E+ ++ +
Sbjct: 164 NNIIYKELCLGIISEISKEKYRDI----------IRALARRGAEGVILGCTEIGMLIRQQ 213
Query: 305 DPLL 308
D L
Sbjct: 214 DTDL 217
>gi|172065222|ref|YP_001815934.1| aspartate racemase [Burkholderia ambifaria MC40-6]
gi|171997464|gb|ACB68381.1| aspartate racemase [Burkholderia ambifaria MC40-6]
Length = 489
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 45/260 (17%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCND--PALNEELFHASVHSLKSK 140
IG++GGV ++T++FL K+V + ++D + V N P E L A
Sbjct: 248 IGVVGGVGPAATVDFLDKIVRNTPASRDQDHIKLLVEQNPQIPDRTENLVGAGADP---- 303
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
+S K+ LE A I +PC+ +HA+ + IP +++
Sbjct: 304 ---------TISLYATCKK--LEDGDADVIAIPCNTAHAFVERIQPWLGIPIVNMLSVTV 352
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
L++ E +GVLAT T+ +G Y++ L++QG V P A V +
Sbjct: 353 AHLRDTYPALRE------VGVLATSGTVESGVYRKALESQGLRQVAPAPALQARV----M 402
Query: 261 EALNHRDMEGARNLLRIG---------IQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK- 310
EA+ +G + G I L+ V+ +++G E+ +LP + + +
Sbjct: 403 EAIYG--PQGVKAGFTTGRCEEDIGAAIDALMDEGVSVIVLGCTELPILLPGGEYVARNG 460
Query: 311 ----CIDPMDALARSTVTWA 326
+DP D LAR+ + +A
Sbjct: 461 RRATLVDPTDVLARTCIGYA 480
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Query: 159 RAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVR 218
RAF E+ G +V+PC +SH + ++ +P + + E V ++ + R
Sbjct: 74 RAF-EKRGVTTVVLPCFLSHTFIDELKANTRLPIVDIVEAVRSHVRR------KYPDATR 126
Query: 219 IGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI---EALNHRDMEG-ARNL 274
IGVLA+D ++ F++V P ++ I + + ++ G L
Sbjct: 127 IGVLASDYVRDKRLFEAYFPTPQFDIVHPRSPDGIDLVTEAIYGRDGIKRGNLRGRPVEL 186
Query: 275 LRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNKKLTL 334
LR + L + V ++ G E+ V+ + P +D A A+ VT ++ T
Sbjct: 187 LRRACEDLADQGVQVIVPGLTEIALVVDEIGPQRVPLVDSNLAYAQYAVTGQPGSRAATF 246
>gi|404369431|ref|ZP_10974770.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185]
gi|313690630|gb|EFS27465.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185]
Length = 230
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 78/183 (42%), Gaps = 54/183 (29%)
Query: 84 TIGIIGGVSVSSTLNFL----------------GKLVWYSA--KDAEECPPFVVCNDPAL 125
TIG+IGG+S ST+ + GKLV +S ++ EEC
Sbjct: 3 TIGLIGGMSWESTVTYYEIINRIIKEKLGGLHSGKLVLFSVDFQEIEEC----------- 51
Query: 126 NEELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVS 185
A KS + L LE+AGA IV+ + H D+
Sbjct: 52 -----QAKGEWDKSAKI------------LTEAAQSLEKAGADFIVICTNTMHKIAPDIQ 94
Query: 186 EGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVV 245
+ +IP LH+ E A EL + ++K ++ +L T T+ FY+ KL ++G EVV
Sbjct: 95 KNINIPILHIAEATADELDKKEIK--------KVALLGTKYTMEQDFYKNKLIDRGIEVV 146
Query: 246 LPD 248
+PD
Sbjct: 147 IPD 149
>gi|385872712|gb|AFI91232.1| Aspartate racemase [Pectobacterium sp. SCC3193]
Length = 236
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 93 VSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASV--HSLKSKTVQLDHIR 148
VS TL +G + W S P + + N+ N+ L A + HS+ ++ +
Sbjct: 2 VSKTLGLIGGMSWEST-----IPYYRIINEYVKNQLGGLHSAKIILHSVDFHEIEQLQSQ 56
Query: 149 GAVSQN---LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKE 205
G +Q L + L QAGA IV+ + H DV +P LH+ + LK+
Sbjct: 57 GDWAQAAAVLGNIAVGLRQAGADAIVICTNTMHKVADDVERASQLPLLHIADATGASLKQ 116
Query: 206 AKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPTIEALN 264
LK ++G+L T T+ FY++++Q + G +V++PD+A E V + L
Sbjct: 117 HGLK--------KVGLLGTRYTMEQDFYRQRIQERFGVDVIVPDQAGKEAVNRIIYDELC 168
Query: 265 HRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
++ + +R + R IQ L + +I+G E+
Sbjct: 169 LGNINDTSRLVYRDIIQQLEQQGAEGIILGCTEI 202
>gi|169795477|ref|YP_001713270.1| aspartate/glutamate racemase [Acinetobacter baumannii AYE]
gi|213158584|ref|YP_002319882.1| aspartate racemase [Acinetobacter baumannii AB0057]
gi|215482962|ref|YP_002325167.1| aspartate racemase [Acinetobacter baumannii AB307-0294]
gi|301345799|ref|ZP_07226540.1| aspartate racemase [Acinetobacter baumannii AB056]
gi|301513552|ref|ZP_07238789.1| aspartate racemase [Acinetobacter baumannii AB058]
gi|301597162|ref|ZP_07242170.1| aspartate racemase [Acinetobacter baumannii AB059]
gi|332855204|ref|ZP_08435755.1| aspartate racemase [Acinetobacter baumannii 6013150]
gi|332872017|ref|ZP_08440404.1| aspartate racemase [Acinetobacter baumannii 6013113]
gi|417572492|ref|ZP_12223346.1| aspartate racemase [Acinetobacter baumannii Canada BC-5]
gi|421622913|ref|ZP_16063805.1| aspartate racemase [Acinetobacter baumannii OIFC074]
gi|421644441|ref|ZP_16084923.1| aspartate racemase [Acinetobacter baumannii IS-235]
gi|421648816|ref|ZP_16089215.1| aspartate racemase [Acinetobacter baumannii IS-251]
gi|421660038|ref|ZP_16100246.1| aspartate racemase [Acinetobacter baumannii Naval-83]
gi|421698972|ref|ZP_16138511.1| aspartate racemase [Acinetobacter baumannii IS-58]
gi|421795421|ref|ZP_16231504.1| aspartate racemase [Acinetobacter baumannii Naval-21]
gi|421802396|ref|ZP_16238349.1| aspartate racemase [Acinetobacter baumannii Canada BC1]
gi|169148404|emb|CAM86269.1| putative Aspartate/Glutamate racemase [Acinetobacter baumannii AYE]
gi|213057744|gb|ACJ42646.1| aspartate racemase [Acinetobacter baumannii AB0057]
gi|213985943|gb|ACJ56242.1| aspartate racemase [Acinetobacter baumannii AB307-0294]
gi|332727581|gb|EGJ59003.1| aspartate racemase [Acinetobacter baumannii 6013150]
gi|332731050|gb|EGJ62353.1| aspartate racemase [Acinetobacter baumannii 6013113]
gi|400208060|gb|EJO39030.1| aspartate racemase [Acinetobacter baumannii Canada BC-5]
gi|404572291|gb|EKA77336.1| aspartate racemase [Acinetobacter baumannii IS-58]
gi|408505225|gb|EKK06950.1| aspartate racemase [Acinetobacter baumannii IS-235]
gi|408514985|gb|EKK16584.1| aspartate racemase [Acinetobacter baumannii IS-251]
gi|408694039|gb|EKL39627.1| aspartate racemase [Acinetobacter baumannii OIFC074]
gi|408706431|gb|EKL51749.1| aspartate racemase [Acinetobacter baumannii Naval-83]
gi|410401918|gb|EKP54053.1| aspartate racemase [Acinetobacter baumannii Naval-21]
gi|410404193|gb|EKP56266.1| aspartate racemase [Acinetobacter baumannii Canada BC1]
Length = 242
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 40/178 (22%)
Query: 84 TIGIIGGVSVSSTL-----------NFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST N LGKL +SAK ++ N E
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQNKLGKL--HSAK--------IILNSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ +L+SK + + GA L + LE+AGA CI++ + H + + ++PF
Sbjct: 48 -IAALQSKGLWQE--AGAY---LAEQAQNLEKAGADCILVCTNTMHKVAPQIEDAITVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
+H+ + AKE+ ++ ++ +L T T+ FY+ +LQ++G EV++P+ A
Sbjct: 102 IHIADATAKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDRGIEVIIPNDA 151
>gi|423419291|ref|ZP_17396380.1| aspartate racemase [Bacillus cereus BAG3X2-1]
gi|401105897|gb|EJQ13864.1| aspartate racemase [Bacillus cereus BAG3X2-1]
Length = 227
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 23/176 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST + + + ++ N +L S+ + T+
Sbjct: 5 IGLIGGLSWESTSLYYKHINTLTLSKYDQ------------NAKLVLYSMDFGEVTTLLQ 52
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+H V L +E +GA C++M H + +V + SIP LH+G+ AKE+
Sbjct: 53 NHQYEEVKNELVTVAKKVENSGAECLLMCSITVHLFAEEVEQAISIPLLHIGDVSAKEMV 112
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
E +K RIG+L T T+ FY +L E ++P ++ + HVI+
Sbjct: 113 EKNIK--------RIGLLGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVIL 160
>gi|399009616|ref|ZP_10712041.1| aspartate racemase [Pseudomonas sp. GM17]
gi|398111361|gb|EJM01248.1| aspartate racemase [Pseudomonas sp. GM17]
Length = 233
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 32/256 (12%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDA----EECPPFVVCNDPALNEELFHASVHSLK 138
TIG+IGG+S S+ + +L+ +D + D E+ HA L
Sbjct: 2 RTIGLIGGMSWESSAEYY-RLINQQVRDRLGPLRSARLLMYSVDFGPVEQAQHAGRWDLA 60
Query: 139 SKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
+ + +D R LE GA C+V+ + H ++ S+PFLH+ +
Sbjct: 61 AGIL-VDAAR------------RLEAGGAECVVLCTNTMHKVADEIQAVLSVPFLHIADP 107
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME--HVI 256
A+ LEAG+ + +G+L T T+ F +++L ++G +V++PD + H I
Sbjct: 108 TAE-------AALEAGT-LSVGLLGTAFTMEQDFLKQRLVDRGLKVLVPDATDRQAVHRI 159
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL-PKDDPLLKKCIDPM 315
I E E +R + IQ L+ R A+I+G E+ +L P+ PL +D
Sbjct: 160 IYD-ELCVGVISEASRQRYQQVIQALMERGAQAIILGCTEIGLLLKPEHSPL--PLLDTT 216
Query: 316 DALARSTVTWARSNKK 331
+ AR+ V +A +++
Sbjct: 217 ELHARAAVAFALGDQE 232
>gi|384180536|ref|YP_005566298.1| putative racemase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324326620|gb|ADY21880.1| putative racemase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 226
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
+E++GA C++M + H + +V SIP LH+G+ AKE+ + +K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVENAISIPLLHIGDVSAKEMVDQNIK--------RIGL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKAT---MEHVII 257
L T T+ FY+ +L + E ++P++ + HVI+
Sbjct: 121 LGTKQTMEQDFYKSRLAHYNIETIIPNEEERNFIHHVIL 159
>gi|410866856|ref|YP_006981467.1| Aspartate/glutamate racemase [Propionibacterium acidipropionici
ATCC 4875]
gi|410823497|gb|AFV90112.1| Aspartate/glutamate racemase [Propionibacterium acidipropionici
ATCC 4875]
Length = 229
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFV-VCNDPALNEELFHASVHSLKSKT 141
TIG++GG+S S+ + WY + + + P L + L A + +L+
Sbjct: 2 KTIGVLGGMSWKSSAD------WYRMANEQVHETLGGYHSTPILLDSLDFAEIEALQESG 55
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
D GA+ L LE AGA IV+ + H ++ +PFLH+G+ A+
Sbjct: 56 DWED--AGAI---LAEHAKRLEAAGAGLIVLCTNTMHIVADRITAAIGVPFLHIGDTTAE 110
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIP 258
+ A L +GVL T T+ FY+++L G ++P D+AT+ +I
Sbjct: 111 AITAAGLST--------VGVLGTSFTMEQPFYRDRLAAHGITSLVPEDADRATVHRIIFD 162
Query: 259 TIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
E ++ + +R R I+ L+ R +I+G E++ ++ + D
Sbjct: 163 --ELVHGIVTDQSRRAYREVIRRLVDRGAEGIILGCTEIELLIGRAD 207
>gi|425899330|ref|ZP_18875921.1| aspartate racemase [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|397889940|gb|EJL06422.1| aspartate racemase [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
Length = 234
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 115/256 (44%), Gaps = 32/256 (12%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDA----EECPPFVVCNDPALNEELFHASVHSLK 138
TIG+IGG+S S+ + +L+ +D + D E+ HA L
Sbjct: 2 RTIGLIGGMSWESSAEYY-RLINQQVRDRLGPLRSARLLMYSVDFGPVEQAQHAGRWDLA 60
Query: 139 SKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
+ + +D R LE GA C+V+ + H ++ S+PFLH+ +
Sbjct: 61 AGIL-VDAAR------------RLEAGGAECVVLCTNTMHKVADEIQAVLSVPFLHIADP 107
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME--HVI 256
A+ LEAG+ +R+G+L T T+ F +++L ++G +V++PD + H I
Sbjct: 108 TAE-------AALEAGT-LRVGLLGTAFTMEQDFLKQRLLDRGLKVLVPDAVDRQAVHRI 159
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL-PKDDPLLKKCIDPM 315
I E E +R + IQ L R A+I+G E+ +L P+ PL +D
Sbjct: 160 IYD-ELCVGVISEASRQRYQQVIQALRERGAQAIILGCTEIGLLLKPEHSPL--PLLDTT 216
Query: 316 DALARSTVTWARSNKK 331
+ AR+ V +A +
Sbjct: 217 ELHARAAVAFALDGAR 232
>gi|450061213|ref|ZP_21843670.1| putative amino acid recemase [Streptococcus mutans NLML5]
gi|449207554|gb|EMC08225.1| putative amino acid recemase [Streptococcus mutans NLML5]
Length = 233
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 84/193 (43%), Gaps = 50/193 (25%)
Query: 79 LNQANTIGIIGGVSVSSTLNF-----------LG-----KLVWYSAKDAEECPPFVVCND 122
+N TIG+IGG+S ST ++ LG K++ YS AE
Sbjct: 1 MNNMKTIGLIGGMSWESTTSYYQLINETIKKELGGLHSAKILLYSVDFAEI--------- 51
Query: 123 PALNEELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHG 182
E + AS KS V L LEQAGA IV+ + H
Sbjct: 52 -----EHYQASGDWAKSAEV------------LSQIAQKLEQAGADFIVICTNTMHKVAP 94
Query: 183 DVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGF 242
+ + +IP LH+ + A+ L E ++ ++G+L T T++ FY+EKL G
Sbjct: 95 QIQKQIAIPILHIAQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGL 146
Query: 243 EVVLPDKATMEHV 255
EV++PD+A + V
Sbjct: 147 EVLIPDQAGITEV 159
>gi|398867429|ref|ZP_10622889.1| aspartate racemase [Pseudomonas sp. GM78]
gi|398237014|gb|EJN22778.1| aspartate racemase [Pseudomonas sp. GM78]
Length = 511
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 27/254 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GI+GGV ++T++F+GK+V ++ A +E VV +P + + ++ +
Sbjct: 254 LGIVGGVGPAATVDFMGKVVAHTPAGRDQEHIKMVVEQNPQIPD----------RTANLL 303
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
D ++ KR LE +GA I +PC+ +HA+ + +P +++ E
Sbjct: 304 YDETDPTMAMYATCKR--LESSGANAIAIPCNTAHAFVERIQAHLRVPIVNM----LTET 357
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP--DKATMEHVIIPTIE 261
EA ++ G+G +G+LAT T+ + Y E + G +++ P D + I
Sbjct: 358 IEAIVQ--RYGAGKTVGLLATSGTIKSQVYHEAARLAGLKIITPGVDYQALVMESIYGDH 415
Query: 262 ALNHRDMEG-ARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK-----CIDPM 315
+ EG ++ L I + L + +I+G E+ VL + + K +DP
Sbjct: 416 GIKAGFTEGICKDQLLIAAEHLCELGADVLILGCTELPLVLEHSESCMIKNHEVALVDPT 475
Query: 316 DALARSTVTWARSN 329
LA + AR N
Sbjct: 476 TILALKCIELAREN 489
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 71/179 (39%), Gaps = 27/179 (15%)
Query: 75 PDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASV 134
P S + A +GI+GG+ + + KLV A V D LF
Sbjct: 7 PSSKSSFARKLGIVGGLGSLAGGDLFYKLVKSRA----------VLEDQGRYHFLFEQ-- 54
Query: 135 HSLKSKTVQLDHIRGAVSQNLRHKRAF-----LEQAGARCIVMPCHISHAWHGDVSEGCS 189
H K + LD RG S R F E + +V+PC SH + ++ E
Sbjct: 55 HPFKDVLMPLD--RG-TSMTSRKFYVFQVCQTFEASEVNAVVLPCFASHTFREEIQEEIG 111
Query: 190 IPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
IP L + + K + A G +G++A+D +G ++ N F++V P+
Sbjct: 112 IPVLDMMAALRKHVDHV------AERGSTLGIIASDYVRHSGLFERYFGND-FKLVYPN 163
>gi|421664325|ref|ZP_16104465.1| aspartate racemase [Acinetobacter baumannii OIFC110]
gi|408712622|gb|EKL57805.1| aspartate racemase [Acinetobacter baumannii OIFC110]
Length = 242
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 40/178 (22%)
Query: 84 TIGIIGGVSVSSTL-----------NFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST N LGKL +SAK ++ N E
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQNKLGKL--HSAK--------IILNSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ +L+SK + + GA L + LE+AGA CI++ + H + + ++PF
Sbjct: 48 -IAALQSKGLWQE--AGAY---LAEQAQNLEKAGADCILVCTNTMHKVAPQIEDAITVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
+H+ + AKE+ ++ ++ +L T T+ FY+ +LQ++G EV++P+ A
Sbjct: 102 IHIADATAKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDRGIEVIIPNDA 151
>gi|421488088|ref|ZP_15935483.1| aspartate racemase [Streptococcus oralis SK304]
gi|400369249|gb|EJP22251.1| aspartate racemase [Streptococcus oralis SK304]
Length = 230
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 32/180 (17%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASVHSLKSK 140
TIG+IGG+S ST ++ + + N+ E L A +
Sbjct: 2 KTIGLIGGMSWESTTSY-----------------YQIINETIKKELGGLHSAKILLYSVD 44
Query: 141 TVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
V+++H + Q L LEQAGA IV+ + H V E +IP LH+
Sbjct: 45 FVEIEHYQAVGDWEKSGQLLADIAQRLEQAGADFIVICTNTMHKVASQVQELITIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ A+ L ++ ++G+L T T++ FY+EKL G EV++PD+A + V
Sbjct: 105 AQATAQSLLADGIQ--------KVGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEV 156
>gi|378823358|ref|ZP_09846007.1| aspartate racemase [Sutterella parvirubra YIT 11816]
gi|378597819|gb|EHY31058.1| aspartate racemase [Sutterella parvirubra YIT 11816]
Length = 221
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 41/235 (17%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK-- 140
TIG+IGG+S+ ST+ + +L+ + A+ E L +HS K
Sbjct: 2 KTIGLIGGMSLESTVTYY-QLI-----------------NRAVRERL--GGLHSAKIVLW 41
Query: 141 TVQLDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+V+ D I S K A LE AGA +++ + H + + S+P
Sbjct: 42 SVEFDEIERCQSSGDWEKAARILADCAKGLEAAGADMVLICTNTMHKVADETAAVVSVPL 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
LH+ E + L +K R+ +L T TL+ FY+++L QGFEV++P A +
Sbjct: 102 LHIAEATGRALGRDGVK--------RVALLGTKYTLTEPFYKDRLATQGFEVMIPSAADV 153
Query: 253 EHVIIPTIEAL--NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
E V E L E LR+ I+ L + AVI+G E+ ++ + D
Sbjct: 154 EMVNRVIFEELCVGVVKPESKAAFLRV-IEDLRKQGAEAVILGCTEIGMLVSQAD 207
>gi|423138332|ref|ZP_17125975.1| aspartate racemase [Fusobacterium nucleatum subsp. animalis F0419]
gi|371958370|gb|EHO76089.1| aspartate racemase [Fusobacterium nucleatum subsp. animalis F0419]
Length = 231
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 110/259 (42%), Gaps = 42/259 (16%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS--KT 141
TIG+IGG+S ST+ + + + N+ N+ +HS K +
Sbjct: 3 TIGLIGGMSWESTVTY-----------------YQIINEVVKNK---LGGLHSAKCVLYS 42
Query: 142 VQLDHIRGAV-------SQNLRHKRAF-LEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
V + I S + K A LE+AGA IV+ + H + + +P L
Sbjct: 43 VDFEEIEECQKKGDWDRSAEILGKVALSLEKAGADFIVICTNTMHKVVSGIKKYTKLPIL 102
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
H+ E A ELK+A +K +IG+L T T+ FY++ L + G EVV+P+ +E
Sbjct: 103 HIAEMTAIELKKAGIK--------KIGLLGTKYTMQQDFYKQILIDNGIEVVIPNSKDIE 154
Query: 254 HV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC 311
V +I L E LRI I+ L VI+G E+ G+L K +
Sbjct: 155 IVNSVIFNELCLGEIKKESKEEYLRI-IKELSKAGAKGVILGCTEI-GLLIKQEDTDVPL 212
Query: 312 IDPMDALARSTVTWARSNK 330
D + A S +A K
Sbjct: 213 FDTTNIHATSAALYAIEEK 231
>gi|389575022|ref|ZP_10165072.1| aspartate racemase [Bacillus sp. M 2-6]
gi|388425077|gb|EIL82912.1| aspartate racemase [Bacillus sp. M 2-6]
Length = 232
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 118/254 (46%), Gaps = 24/254 (9%)
Query: 82 ANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVC-NDPALNEELFHASVHSLKSK 140
+ TIGI+GG+ +T++ + K++ ++ ++ V+ NDP + + +++ K
Sbjct: 2 STTIGIMGGMGPLATIDLMKKIISHTPAIKDQDHLHVIADNDPQIPDR-----TNAIFGK 56
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
D ++ R LE+AGA I++ C+ +H + +V + IP +++ A
Sbjct: 57 GE--DPTEYMIASAKR-----LERAGADFILIACNTAHFFLENVQQSTHIPIMNMPLETA 109
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
K LK+ +G+L TD TL YQ+ + +V+ P + T++ ++ I
Sbjct: 110 KHLKKHHY--------TSVGLLCTDGTLKTQLYQKACAHHKIDVMTPSE-TLQKNVMNGI 160
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALAR 320
A+ + + L + ++L+ + A+I G E+ VL + K IDP LA+
Sbjct: 161 YAVKAGKLSKGESELALAAEILINQGAEAIIAGCTEIPLVLRSTKAV--KVIDPTVILAK 218
Query: 321 STVTWARSNKKLTL 334
V +KL +
Sbjct: 219 EAVKLVYELEKLNI 232
>gi|161524302|ref|YP_001579314.1| aspartate racemase [Burkholderia multivorans ATCC 17616]
gi|189350942|ref|YP_001946570.1| aspartate racemase [Burkholderia multivorans ATCC 17616]
gi|160341731|gb|ABX14817.1| aspartate racemase [Burkholderia multivorans ATCC 17616]
gi|189334964|dbj|BAG44034.1| aspartate racemase [Burkholderia multivorans ATCC 17616]
Length = 230
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 47/259 (18%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + + + N + + H H+ KS V
Sbjct: 2 KTIGLIGGMSWESSAEY-----------------YRLINR---HSKALHGGHHNAKSVLV 41
Query: 143 QLD----------HIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+D H A+ + + LE AGA +V+ + H H + ++PF
Sbjct: 42 TVDFAEIEALQRAHDWPALGERMADAARQLEAAGADLVVLTTNTMHRVHDAIEAAVTLPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPD--- 248
LH+ + L++A ++ R+ +L T T+ FY ++L+ + G +V++PD
Sbjct: 102 LHIADPTGAALRDAGVE--------RVALLGTRYTMELPFYAQRLRERFGIDVLVPDERE 153
Query: 249 KATMEHVIIPTI-EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPL 307
+A + +I + + R+ A +RI I+ L R AVI+G E+ ++ DD
Sbjct: 154 RADVHRIIYDELCHGIVARESRAA--YVRI-IESLAQRGAQAVILGCTEITLLIGADDSP 210
Query: 308 LKKCIDPMDALARSTVTWA 326
L D A++ V WA
Sbjct: 211 L-PVFDTTALHAKAAVEWA 228
>gi|221214797|ref|ZP_03587766.1| aspartate racemase [Burkholderia multivorans CGD1]
gi|421476109|ref|ZP_15924022.1| aspartate racemase [Burkholderia multivorans CF2]
gi|221165336|gb|EED97813.1| aspartate racemase [Burkholderia multivorans CGD1]
gi|400228950|gb|EJO58835.1| aspartate racemase [Burkholderia multivorans CF2]
Length = 230
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 47/259 (18%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + + + N + + H H+ KS V
Sbjct: 2 KTIGLIGGMSWESSAEY-----------------YRLINR---HSKALHGGHHNAKSVLV 41
Query: 143 QLD----------HIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+D H A+ + + LE AGA +V+ + H H + ++PF
Sbjct: 42 TVDFAEIEALQRAHDWPALGERMADAARQLEAAGADLVVLTTNTMHRVHDAIEAAITLPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPD--- 248
LH+ + L++A ++ R+ +L T T+ FY ++L+ + G +V++PD
Sbjct: 102 LHIADPTGAALRDAGVE--------RVALLGTRYTMELPFYAQRLRERFGIDVLVPDERE 153
Query: 249 KATMEHVIIPTI-EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPL 307
+A + +I + + R+ A +RI I+ L R AVI+G E+ ++ DD
Sbjct: 154 RADVHRIIYDELCHGIVARESRAA--YVRI-IESLAQRGAQAVILGCTEITLLIGADDSP 210
Query: 308 LKKCIDPMDALARSTVTWA 326
L D A++ V WA
Sbjct: 211 L-PVFDTTALHAKAAVEWA 228
>gi|153007895|ref|YP_001369110.1| aspartate racemase [Ochrobactrum anthropi ATCC 49188]
gi|151559783|gb|ABS13281.1| aspartate racemase [Ochrobactrum anthropi ATCC 49188]
Length = 230
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 31/251 (12%)
Query: 83 NTIGIIGGVSVSSTLNF---LGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
TIG+IGG+S S+ + + + + + D E+L H +
Sbjct: 2 KTIGLIGGMSWESSQEYYRIINQEIRARLGGTHSAKSLMWSMDFGEIEQLQH------QG 55
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
K +L + +QNL E+ GA I++ + H DV SIP +H+ +
Sbjct: 56 KWEELTRLMIEAAQNL-------EKGGADFILICTNTMHKMAADVENATSIPLVHIADPT 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKL-QNQGFEVVLPDKA---TMEHV 255
A+++K A L ++G+L T T+ FY+ +L G EV+ PD A T+ +
Sbjct: 109 AEKIKAAGLS--------KVGLLGTAFTMEQDFYKGRLVAKHGLEVLTPDDADRKTVHDI 160
Query: 256 IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPM 315
I + RD +R R I L+ R A+I+G E+ ++ + D + D
Sbjct: 161 IYQELVVGEIRD--ASREKYRAVINRLVERGARAIILGCTEIMLLIGQQDSPV-PVFDTT 217
Query: 316 DALARSTVTWA 326
A + V WA
Sbjct: 218 RLHAEAAVDWA 228
>gi|450098111|ref|ZP_21857832.1| putative amino acid recemase [Streptococcus mutans SF1]
gi|450171457|ref|ZP_21884004.1| putative amino acid recemase [Streptococcus mutans SM4]
gi|449221859|gb|EMC21611.1| putative amino acid recemase [Streptococcus mutans SF1]
gi|449244002|gb|EMC42396.1| putative amino acid recemase [Streptococcus mutans SM4]
Length = 233
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 24/180 (13%)
Query: 79 LNQANTIGIIGGVSVSST---LNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVH 135
+N TIG+IGG+S ST F+ + + + D A E + AS
Sbjct: 1 MNTMKTIGLIGGMSWESTTSYYQFINETIKKELGGLHSAKILLYSVDFAEIEH-YQASGD 59
Query: 136 SLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
KS V L LEQAGA IV+ + H + + +IP LH+
Sbjct: 60 WAKSAEV------------LSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPILHI 107
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ A+ L E ++ ++G+L T T++ FY+EKL G EV++PD+A + V
Sbjct: 108 AQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQAGITEV 159
>gi|448589432|ref|ZP_21649591.1| aspartate racemase [Haloferax elongans ATCC BAA-1513]
gi|445735860|gb|ELZ87408.1| aspartate racemase [Haloferax elongans ATCC BAA-1513]
Length = 248
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 39/237 (16%)
Query: 80 NQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
++ TIGI+GG+S ST+ + ++ D A+NE +
Sbjct: 11 DEPRTIGILGGMSGKSTVEYYRRI------------------DDAVNERYGGHHAGDILI 52
Query: 140 KTVQLDHIRGAVSQN--------LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
++V I G ++ L LE GA ++M + H D+++ SIP
Sbjct: 53 RSVNFADIEGFIASEQWDEAGSYLADAARDLEAGGADFVIMATNTMHKVAPDITDALSIP 112
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
F+H+ + A + +A + +GVL T T+ FY+E+ ++V+PD+A
Sbjct: 113 FVHIVDAAADAILDAGIDT--------VGVLGTSVTMEDAFYRERFAQHDIDIVVPDEAD 164
Query: 252 MEHVIIPTIEALNH---RDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
E V E L RD E L + + L+ + V++G E++ ++ + D
Sbjct: 165 REDVDRIVFEELTKGKIRD-ESRDRYLEV-VDDLVEQGAEGVVLGCTEIEQLIDQAD 219
>gi|260495458|ref|ZP_05815584.1| aspartate racemase [Fusobacterium sp. 3_1_33]
gi|260196995|gb|EEW94516.1| aspartate racemase [Fusobacterium sp. 3_1_33]
Length = 231
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 110/259 (42%), Gaps = 42/259 (16%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS--KT 141
TIG+IGG+S ST+ + + + N+ N+ +HS K +
Sbjct: 3 TIGLIGGMSWESTVTY-----------------YQIINEVVKNK---LGGLHSAKCVLYS 42
Query: 142 VQLDHIRGAV-------SQNLRHKRAF-LEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
V + I S + K A LE+AGA IV+ + H + + +P L
Sbjct: 43 VDFEEIEECQKNGDWDRSAEILGKVALSLEKAGADFIVICTNTMHKVVSGIKKYTKLPIL 102
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
H+ E A ELK+A +K +IG+L T T+ FY++ L + G EVV+P+ +E
Sbjct: 103 HIAEMTAIELKKAGIK--------KIGLLGTKYTMQQDFYKQILIDNGIEVVIPNSKDIE 154
Query: 254 HV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC 311
V +I L E LRI I+ L VI+G E+ G+L K +
Sbjct: 155 IVNSVIFNELCLGEIKKESKEEYLRI-IKELSKAGAKGVILGCTEI-GLLIKQEDTDVPL 212
Query: 312 IDPMDALARSTVTWARSNK 330
D + A S +A K
Sbjct: 213 FDTTNIHATSAALYAIEEK 231
>gi|409993081|ref|ZP_11276237.1| aspartate racemase [Arthrospira platensis str. Paraca]
gi|409936052|gb|EKN77560.1| aspartate racemase [Arthrospira platensis str. Paraca]
Length = 262
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 22/249 (8%)
Query: 86 GIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQLD 145
GIIGG+ + + F L+ +++ C D + F + L +T L
Sbjct: 14 GIIGGLGPLAHIEFERLLLAFNSSRG-------ACGDRQ-HPIWFLINATDLPDRTQSLL 65
Query: 146 HIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKE 205
+ + + L LE AGA +V+ C+ SH ++ V +IP++H+ + + +K
Sbjct: 66 GNQPSCAPGLVKYGQILEVAGADFLVITCNTSHGFYDLVQSQLNIPWIHIMQATVRFIK- 124
Query: 206 AKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP------DKATMEHVIIPT 259
L R+G+LAT+ TL A YQ+ L G + P + M + P
Sbjct: 125 -----LHYPELNRVGILATNGTLQAHLYQDSLTAAGLTAIAPILNSELQQDIMNAIYHPI 179
Query: 260 --IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I+A + + N+L+ ++ L + + +I G E+ VL D IDP++
Sbjct: 180 WGIKATGVQILPPPINILKTAVKWLENQGADLLIAGCTEISVVLKLLDTSSLIAIDPLEI 239
Query: 318 LARSTVTWA 326
LA T+ A
Sbjct: 240 LANLTLDLA 248
>gi|417549222|ref|ZP_12200302.1| aspartate racemase [Acinetobacter baumannii Naval-18]
gi|417567292|ref|ZP_12218164.1| aspartate racemase [Acinetobacter baumannii OIFC143]
gi|395552964|gb|EJG18972.1| aspartate racemase [Acinetobacter baumannii OIFC143]
gi|400387190|gb|EJP50263.1| aspartate racemase [Acinetobacter baumannii Naval-18]
Length = 242
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 40/178 (22%)
Query: 84 TIGIIGGVSVSSTL-----------NFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST N LGKL +SAK ++ N E
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQNKLGKL--HSAK--------IILNSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ +L+SK + + GA L + LE+AGA CI++ + H + + ++PF
Sbjct: 48 -IAALQSKGLWQE--AGAY---LAEQAKNLEKAGADCILVCTNTMHKVAPQIEDAITVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
+H+ + AKE+ ++ ++ +L T T+ FY+ +LQ++G EV++P+ A
Sbjct: 102 IHIADATAKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDRGIEVIIPNDA 151
>gi|400289631|ref|ZP_10791659.1| putative amino acid recemase [Streptococcus ratti FA-1 = DSM 20564]
gi|399922016|gb|EJN94832.1| putative amino acid recemase [Streptococcus ratti FA-1 = DSM 20564]
Length = 230
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 34/228 (14%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASVHSLKSKT 141
TIG+IGG+S ST ++ + + N+ NE L A +
Sbjct: 3 TIGLIGGMSWESTTSY-----------------YQLINETIKNELGGLHSAKILLYSVDF 45
Query: 142 VQLDHIRG----AVSQNLRHKRA-FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
+++H + A S + K A LEQAGA IV+ + H + E +IP LH+
Sbjct: 46 AEIEHYQASGDWAKSAEVLSKIAQKLEQAGADFIVICTNTMHKVAPQIQEKITIPILHIA 105
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
+ A+ L E ++ ++G+L T T++ FY++KL G EV++PD+ + V
Sbjct: 106 QATAESLLENGIQ--------KVGLLGTKYTMTQDFYKDKLLEAGLEVLVPDQTGIAEVN 157
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRA-VNAVIIGSDEMQGVLPK 303
+ L D++ + + I L +A AVI+G E+ G+L K
Sbjct: 158 RIIYDELCLGDIKDSSKQTYLAIIDDLKKAGAEAVILGCTEI-GLLVK 204
>gi|449990103|ref|ZP_21821346.1| putative amino acid recemase [Streptococcus mutans NVAB]
gi|449182106|gb|EMB84152.1| putative amino acid recemase [Streptococcus mutans NVAB]
Length = 233
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 38/187 (20%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLK 138
+N TIG+IGG+S ST ++ + + N+ + +EL +HS K
Sbjct: 1 MNTMKTIGLIGGMSWESTTSY-----------------YQLINET-IKKEL--GGLHSAK 40
Query: 139 -----SKTVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGC 188
+++H + + ++ L LEQAGA IV+ + H + +
Sbjct: 41 ILLYSVDFAEIEHYQASGDWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQI 100
Query: 189 SIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
+IP LH+ + A+ L E ++ ++G+L T T++ FY+EKL G EV++PD
Sbjct: 101 AIPILHIAQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPD 152
Query: 249 KATMEHV 255
+A + V
Sbjct: 153 QAGITEV 159
>gi|196166518|gb|ACG70825.1| FomE [Streptomyces fradiae]
Length = 228
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 22/216 (10%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLV-WYSAKDAEECPPFVVCNDPALNEELFHASVHSL 137
++ IGIIGG+ + NF +LV +A +E P + +DPA+ L H +
Sbjct: 1 MDHWQKIGIIGGLGPLACANFYMRLVEMTTAGSDQEHPEVFLLSDPAIPSRLDHL-LSDG 59
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
S QL Q++ + L++AGA+ I MP + A++ +VS +P + +
Sbjct: 60 PSPVEQL--------QDVARR---LQEAGAQLIAMPSVTTQAYYDEVSAAVDVPVVDMLR 108
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
VA L+EA + R + TD L G L + G V PD AT I
Sbjct: 109 VVAVGLREAGV--------TRPALAVTDGALKLGLLHRALVDGGLTPVYPDPATQRE-IQ 159
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIG 293
+E + + A LR I+ R + V++G
Sbjct: 160 ECVEMVKSGRVLEASAQLRKAIEGDWTRPGDGVVVG 195
>gi|294793056|ref|ZP_06758202.1| putative aspartate racemase [Veillonella sp. 6_1_27]
gi|294794905|ref|ZP_06760040.1| putative aspartate racemase [Veillonella sp. 3_1_44]
gi|416999798|ref|ZP_11940218.1| aspartate racemase [Veillonella parvula ACS-068-V-Sch12]
gi|294454267|gb|EFG22641.1| putative aspartate racemase [Veillonella sp. 3_1_44]
gi|294456001|gb|EFG24365.1| putative aspartate racemase [Veillonella sp. 6_1_27]
gi|333976604|gb|EGL77471.1| aspartate racemase [Veillonella parvula ACS-068-V-Sch12]
Length = 231
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIG+IGG+S ST+ + L E V+ + L+ ++
Sbjct: 3 TIGLIGGMSWESTITYYQVL--------NETIKQVLGGLHSAKCILYSVDFEEIEKCQAN 54
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
D +R A + L LE+AGA IV+ + H ++ IP LH+ E A EL
Sbjct: 55 GDWVRSA--EILSDAAQSLEKAGADYIVICTNTMHKVADEIKRHIHIPLLHIAEMTAVEL 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV--IIPTIE 261
+++ + ++G+L T T+ FY+ L+N+G VV+P++ +E V II
Sbjct: 113 EKSGI--------TKVGLLGTKYTMQQDFYKCILENRGIHVVIPNEDQVELVNDIIYNEL 164
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDP 306
L E + L I I L+ V VI+G E+ ++ +DD
Sbjct: 165 CLGVISNESKQQYLDI-IGDLVKSGVQGVILGCTEIGLLIKQDDT 208
>gi|323529527|ref|YP_004231679.1| aspartate racemase [Burkholderia sp. CCGE1001]
gi|323386529|gb|ADX58619.1| aspartate racemase [Burkholderia sp. CCGE1001]
Length = 487
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 123/256 (48%), Gaps = 27/256 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G++GGV ++T++FL K+V + A+ ++ +V +P + + +++ +
Sbjct: 248 LGVVGGVGPAATVDFLDKIVRNTPARRDQDHVKLLVEQNPQIPD----------RTENLI 297
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
+ VS KR LE+ GA I +PC+ +HA+ + +P +++ + +
Sbjct: 298 GEGADPTVSLYATCKR--LEEGGADIIAIPCNTAHAFVERIQPYLRVPIVNMLTETVRYV 355
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI--IPTIE 261
E P + +IGVLAT T+++G Y++ L+ QG + + P+ A V+ I +
Sbjct: 356 HEHY--PAQR----KIGVLATSGTMASGVYEKALEAQGLQQIAPEPALQSRVMQAIYGKQ 409
Query: 262 ALNHRDMEGA-RNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-----KCIDPM 315
+ GA + + ++ L+ V +++G E+ +LP + + IDP
Sbjct: 410 GVKAGFTAGACHDDIAAAVEGLIDEGVEVIVLGCTELPLLLPHAEFVGSGGARVTLIDPT 469
Query: 316 DALARSTVTWARSNKK 331
LAR + +A + ++
Sbjct: 470 HVLARRCIAYALAARE 485
>gi|170699320|ref|ZP_02890368.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
gi|170135750|gb|EDT04030.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
Length = 490
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 114/258 (44%), Gaps = 41/258 (15%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCND--PALNEELFHASVHSLKSK 140
IG++GGV ++T++FL K+V + ++D + V N P E L A
Sbjct: 249 IGVVGGVGPAATVDFLDKIVRNTPASRDQDHIKLLVEQNPQIPDRTENLVGAGADP---- 304
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
+S K+ LE A I +PC+ +HA+ + IP +++
Sbjct: 305 ---------TISLYATCKK--LEDGDADVIAIPCNTAHAFVERIQPWLGIPIVNMLTVTV 353
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
L++ E +GVLAT T+ +G Y++ L++QG V P A V +
Sbjct: 354 AHLRDTYPALRE------VGVLATSGTIESGVYRKALESQGLRQVAPAPALQARV----M 403
Query: 261 EAL--NHRDMEG---ARNLLRIG--IQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK--- 310
EA+ +H G R IG I L+ V+ +++G E+ +LP + + +
Sbjct: 404 EAIYGSHGVKAGFTTGRCEEDIGAAIDALMDEGVSVIVLGCTELPILLPGGEYVGRNGRR 463
Query: 311 --CIDPMDALARSTVTWA 326
+DP D LAR+ + +A
Sbjct: 464 ATLVDPTDVLARTCIGYA 481
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 159 RAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVR 218
RAF E+ G +V+PC +SH + ++ +P + + E V ++ + R
Sbjct: 75 RAF-EKRGVTTVVLPCFLSHTFIDELKANTRLPIVDIVEAVRSHVRR------KYPDATR 127
Query: 219 IGVLATDATLSAGFYQEKLQNQGFEVVLP 247
IGVLA+D ++ F++V P
Sbjct: 128 IGVLASDYVRDKRLFEAYFPAPQFDIVHP 156
>gi|421867642|ref|ZP_16299298.1| Aspartate racemase [Burkholderia cenocepacia H111]
gi|358072386|emb|CCE50176.1| Aspartate racemase [Burkholderia cenocepacia H111]
Length = 230
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 104/256 (40%), Gaps = 41/256 (16%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + + +S + H H+ KS V
Sbjct: 2 KTIGLIGGMSWESSAEYYRMINRHS--------------------KALHGGHHNAKSVLV 41
Query: 143 QLD----------HIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+D H A+ + + LE AGA +V+ + H H + ++PF
Sbjct: 42 TVDFADIEALQRTHDWAALGERMADAARQLEAAGADLVVLTTNTMHRVHDAIEAAVTLPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKAT 251
LH+ + L+ A ++ R+ +L T T+ FY +L+ + G +V++PD+
Sbjct: 102 LHIADPTGSALRAAGVE--------RVALLGTRYTMELPFYAARLREKFGLDVLVPDEPG 153
Query: 252 MEHVIIPTIEALNHRDMEGARNLLRIG-IQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK 310
+ V + L H + + I L R AVI+G E+ ++ DD L
Sbjct: 154 RDDVHRIIYDELCHGVISTQSRATYVSIIDALATRGAQAVILGCTEITLLIGADDSPL-P 212
Query: 311 CIDPMDALARSTVTWA 326
D A++ V WA
Sbjct: 213 VFDTTALHAKAAVEWA 228
>gi|254247766|ref|ZP_04941087.1| Aspartate racemase [Burkholderia cenocepacia PC184]
gi|124872542|gb|EAY64258.1| Aspartate racemase [Burkholderia cenocepacia PC184]
Length = 230
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 107/256 (41%), Gaps = 41/256 (16%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + + +S + H H+ KS V
Sbjct: 2 KTIGLIGGMSWESSAEYYRMINRHS--------------------KALHGGHHNAKSVLV 41
Query: 143 QLD----------HIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+D H A+ + + LE AGA +V+ + H H + ++PF
Sbjct: 42 TVDFAEIEALQRTHDWAALGERMADAARQLEAAGADLVVLTTNTMHRVHDAIEAAVTLPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKAT 251
LH+ + L+ A ++ R+ +L T T+ FY +L+ + G +V++PD+
Sbjct: 102 LHIADPTGSALRAAGVE--------RVALLGTRYTMELPFYAARLREKFGLDVLVPDERG 153
Query: 252 MEHVIIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK 310
+ V + L H + E +R+ I L R AVI+G E+ ++ DD L
Sbjct: 154 RDDVHRIIYDELCHGVISEESRSTYVSIIDGLAQRGAQAVILGCTEITLLIGADDSPL-P 212
Query: 311 CIDPMDALARSTVTWA 326
D A++ V WA
Sbjct: 213 VFDTTALHAKAAVEWA 228
>gi|449995365|ref|ZP_21822956.1| putative amino acid recemase [Streptococcus mutans A9]
gi|449184552|gb|EMB86488.1| putative amino acid recemase [Streptococcus mutans A9]
Length = 233
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 38/187 (20%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLK 138
+N TIG+IGG+S ST + + + N+ + +EL +HS K
Sbjct: 1 MNNMKTIGLIGGMSWESTATY-----------------YQLINET-IKKEL--GGLHSAK 40
Query: 139 -----SKTVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGC 188
+++H + + ++ L LEQAGA IV+ + H + +
Sbjct: 41 ILLYSVDFAEIEHYQASGDWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQI 100
Query: 189 SIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
+IP LH+ + A+ L E ++ ++G+L T T++ FY+EKL G EV++PD
Sbjct: 101 AIPILHIAQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPD 152
Query: 249 KATMEHV 255
+A + V
Sbjct: 153 QAGITEV 159
>gi|386723260|ref|YP_006189586.1| hypothetical protein B2K_14035 [Paenibacillus mucilaginosus K02]
gi|384090385|gb|AFH61821.1| hypothetical protein B2K_14035 [Paenibacillus mucilaginosus K02]
Length = 230
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 102/238 (42%), Gaps = 47/238 (19%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S++ + KLV K+A +HS K
Sbjct: 2 KTIGLIGGMSWESSVEYY-KLVNTLVKEA-------------------RGGLHSAKCILY 41
Query: 143 QLDHIRGAVSQNLRHKR------------AFLEQAGARCIVMPCHISHAWHGDVSEGCSI 190
+D + Q R R L++AGA C+++ + H ++ I
Sbjct: 42 SVDF--AEIEQCQREDRWEDAGRILVEAAQALQRAGADCLLLCTNTMHRLAAEIRGSVEI 99
Query: 191 PFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP--- 247
PFLH+ A E++ AK G G RIG+L T T+ FY+ +L+ +G V++P
Sbjct: 100 PFLHIAHAAADEIR-AK------GCG-RIGLLGTVYTMEGDFYRSELEERGIGVLIPDEE 151
Query: 248 DKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
D+ T+ VI E + +R I+ L R V++G E+ +L +DD
Sbjct: 152 DRQTVNAVIYD--ELCRGIILPESREKFVTVIRRLQARGAEGVVLGCTEIGLLLRQDD 207
>gi|421669323|ref|ZP_16109350.1| aspartate racemase [Acinetobacter baumannii OIFC099]
gi|410389066|gb|EKP41488.1| aspartate racemase [Acinetobacter baumannii OIFC099]
Length = 242
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 40/178 (22%)
Query: 84 TIGIIGGVSVSSTL-----------NFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST N LGKL +SAK ++ N E
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQNKLGKL--HSAK--------IILNSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ L+SK + + GA L + LE+AGA CI++ + H + + ++PF
Sbjct: 48 -IAVLQSKGLWQE--AGAY---LAEQAQNLEKAGADCILVCTNTMHKVAPQIEDAITVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
+H+ + AKE+ ++ ++ +L T TL FY+ +LQ+ G EV++P+ A
Sbjct: 102 IHIADATAKEILSQNIR--------KVALLGTAFTLEQDFYKARLQDHGIEVIIPNDA 151
>gi|48477221|ref|YP_022927.1| aspartate racemase [Picrophilus torridus DSM 9790]
gi|48429869|gb|AAT42734.1| aspartate racemase [Picrophilus torridus DSM 9790]
Length = 232
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 31/191 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAE---ECPPFVVCNDPALNEELFHASVHSLKSKT 141
+GIIGG+ +T+ F+ KL S DAE + +V+ NDP + + + A +++S
Sbjct: 5 VGIIGGMGPVATVKFIEKLT--SMTDAEIDQDHVRYVLYNDPEIPDRI-EAYFENMESPV 61
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
A++ ++ +LE G I M C+ +H W + + FL++ + A
Sbjct: 62 -------NAINNGIK----YLESIGIDTIGMACNTAHIWFKEFVYKSN--FLNMIDLTAS 108
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
LK++ K + +L+T+AT+S+G Y KL++ V+PD + +++ +I
Sbjct: 109 VLKKSGFK--------NVLLLSTNATVSSGIYTGKLRDYNINTVIPD----QDIVMKSIH 156
Query: 262 ALNHRDMEGAR 272
+ D + AR
Sbjct: 157 YVKVNDTKMAR 167
>gi|149180603|ref|ZP_01859107.1| aspartate racemase [Bacillus sp. SG-1]
gi|148851756|gb|EDL65902.1| aspartate racemase [Bacillus sp. SG-1]
Length = 231
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 40/231 (17%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S S+ + + + N+ +N++L +HS K +
Sbjct: 4 IGMIGGMSWESSAEY-----------------YRIINE-MINDQL--GGLHSAKCLLYSV 43
Query: 145 DHIR----------GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH 194
D G + L + LE+AGA I++ + H +SE SIP LH
Sbjct: 44 DFTEIERYQSTGEWGRAADVLGEAASSLEKAGADFIILCTNTMHKVIDLISEHISIPVLH 103
Query: 195 VGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEH 254
+ + A ++ +K +G+L T T+ FY+E+L+ G EVV+PD E
Sbjct: 104 IADAAAVHIRSQGIKS--------VGLLGTRYTMEQDFYKERLRMNGIEVVVPDGKEREK 155
Query: 255 VIIPTIEALNHRDMEG-ARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD 304
+ + L +EG +R ++ I+ L + +++G E+ G+L K+
Sbjct: 156 INTIIFDELCVGRIEGESREYMKDIIESLQTKGAEGIVLGCTEI-GLLIKE 205
>gi|337746780|ref|YP_004640942.1| hypothetical protein KNP414_02511 [Paenibacillus mucilaginosus
KNP414]
gi|379720663|ref|YP_005312794.1| hypothetical protein PM3016_2769 [Paenibacillus mucilaginosus 3016]
gi|336297969|gb|AEI41072.1| YgeA [Paenibacillus mucilaginosus KNP414]
gi|378569335|gb|AFC29645.1| YgeA [Paenibacillus mucilaginosus 3016]
Length = 230
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 105/242 (43%), Gaps = 55/242 (22%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S++ + KLV K+A +HS K
Sbjct: 2 KTIGLIGGMSWESSVEYY-KLVNTLVKEA-------------------RGGLHSAKCILY 41
Query: 143 QLDHIRGAVSQNLRHKR------------AFLEQAGARCIVMPCHISHAWHGDVSEGCSI 190
+D + Q R R L++AGA C+++ + H ++ I
Sbjct: 42 SVDF--AEIEQCQREDRWEDAGRILVEAAQALQRAGADCLLLCTNTMHRLAAEIRGSVEI 99
Query: 191 PFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
PFLH+ A E++ AK G G RIG+L T T+ FY+ +L+ +G V++PD+
Sbjct: 100 PFLHIAHAAADEIR-AK------GCG-RIGLLGTVYTMEGDFYRSELEERGIGVLIPDEE 151
Query: 251 TMEHVIIPTIEALNHRDM-------EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK 303
+ T+ A+ + ++ E + + I+ L R V++G E+ +L +
Sbjct: 152 DRQ-----TVNAVIYDELCRGIILPESREKFVSV-IRRLQARGAEGVVLGCTEIGLLLRQ 205
Query: 304 DD 305
DD
Sbjct: 206 DD 207
>gi|299769459|ref|YP_003731485.1| aspartate racemase [Acinetobacter oleivorans DR1]
gi|298699547|gb|ADI90112.1| aspartate racemase [Acinetobacter oleivorans DR1]
Length = 250
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 84 TIGIIGGVSVSSTLNF---LGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
TIG++GG+S ST + + K+V K + P V+ N E + +L++K
Sbjct: 3 TIGLLGGMSWESTALYYQQINKMV--HRKLGKLHSPKVIINSVDFEE------IAALQAK 54
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
+ + GA L + LE+AGA CI++ + H + + SIPFLH+ + A
Sbjct: 55 GLWQE--AGAY---LAEQAQNLEKAGADCILVCTNTMHKVAAQIEDLISIPFLHIADATA 109
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME--HVIIP 258
KE+ + ++ +L T T+ FY+ +LQ+ G VV+P++A + H II
Sbjct: 110 KEILSQNIG--------KVALLGTAFTMEQDFYKARLQDYGIHVVIPNEADRKIVHSIIY 161
Query: 259 TIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
L + + + + I ++ L+ VI+G E+
Sbjct: 162 EELCLGVINPDSQQQYIAI-VERLIAEGTQGVILGCTEI 199
>gi|422338523|ref|ZP_16419483.1| putative aspartate racemase [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|355372439|gb|EHG19780.1| putative aspartate racemase [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 231
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 110/259 (42%), Gaps = 42/259 (16%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS--KT 141
TIG+IGG+S ST+ + + + N+ N+ +HS K +
Sbjct: 3 TIGLIGGMSWESTVTY-----------------YQIINEVVKNK---LGGLHSAKCVLYS 42
Query: 142 VQLDHIRGAV-------SQNLRHKRAF-LEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
V + I S + K A LE+AGA IV+ + H + + +P L
Sbjct: 43 VDFEEIEECQKKGDWDRSAEILGKVALSLEKAGADFIVICTNTMHKVVSGIKKYTKLPIL 102
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
H+ E A ELK+A +K +IG+L T T+ FY++ L + G EVV+P+ +E
Sbjct: 103 HIAEMTAIELKKAGIK--------KIGLLGTKYTMQQDFYKQILIDNGIEVVIPNSKDIE 154
Query: 254 HV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC 311
V +I L E LRI I+ L VI+G E+ G+L K +
Sbjct: 155 IVNSVIFNELCLGKIKKESKEEYLRI-IKDLSKAGAKGVILGCTEI-GLLIKQEDTDVPL 212
Query: 312 IDPMDALARSTVTWARSNK 330
D + A S +A K
Sbjct: 213 FDTTNIHATSAALYAIEEK 231
>gi|225573795|ref|ZP_03782550.1| hypothetical protein RUMHYD_01997 [Blautia hydrogenotrophica DSM
10507]
gi|225038823|gb|EEG49069.1| aspartate racemase [Blautia hydrogenotrophica DSM 10507]
Length = 235
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGI+GG+ +T + K++ + ++ + ++ + +A + K +
Sbjct: 4 TIGILGGMGPLATCDLFSKIIQITDASCDQEHVRICIDNNTEISDRTNAIIRHGKDPVPE 63
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
+ ++ AV L+ GA ++MPC+ +H ++ + IPFL + + AK +
Sbjct: 64 M--VKSAVR---------LQSFGADVLIMPCNTAHYFYDRILPFVDIPFLSMIDETAKAI 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ L+ +IG+LATD TL Y++ + +G +V+P H++ +
Sbjct: 113 SDRGLR--------KIGLLATDGTLQTAVYEKAFKKRGISIVVPPPENQVHIMDLIYNGV 164
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL-------PKDDPLL 308
+ E + I+ L + +++G E+ PK DP L
Sbjct: 165 KAGNKEIDTKPTKKTIEDLFRKGAQTLVLGCTELPVAFDLYGFDYPKTDPTL 216
>gi|421654078|ref|ZP_16094409.1| aspartate racemase [Acinetobacter baumannii Naval-72]
gi|408511928|gb|EKK13575.1| aspartate racemase [Acinetobacter baumannii Naval-72]
Length = 242
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 120/264 (45%), Gaps = 50/264 (18%)
Query: 84 TIGIIGGVSVSSTLNF-----------LGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST + LGKL +SAK V+ N E
Sbjct: 3 TIGLLGGMSWESTALYYQQINKMVHRKLGKL--HSAK--------VIINSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ +L++K + + GA L + LE+AGA CI++ + H + + ++PF
Sbjct: 48 -IAALQAKGLWQE--AGAY---LAEQAQNLEKAGADCILVCTNTMHKVAPQIEDAITVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
+H+ + AKE+ ++ ++ +L T T+ FY+ +LQ++G EV++P+ A
Sbjct: 102 IHIADATAKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDRGIEVIIPNDANR 153
Query: 253 E--HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDE---MQGVLPKDDPL 307
+ H II L + + + I ++ L+ ++ +I+G E + G + PL
Sbjct: 154 KIVHSIIYDELCLGVINPDSQNKYMTI-VEELIGQSAEGIILGCTEICMLIGNIKFSVPL 212
Query: 308 LKKCIDPMDALARSTVTWARSNKK 331
D A+ V +A KK
Sbjct: 213 F----DTTTIHAKEAVNFALEQKK 232
>gi|118478023|ref|YP_895174.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam]
gi|196043544|ref|ZP_03110782.1| aspartate racemase family protein [Bacillus cereus 03BB108]
gi|225864623|ref|YP_002750001.1| aspartate racemase family protein [Bacillus cereus 03BB102]
gi|229184870|ref|ZP_04312061.1| Aspartate racemase [Bacillus cereus BGSC 6E1]
gi|118417248|gb|ABK85667.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam]
gi|196025853|gb|EDX64522.1| aspartate racemase family protein [Bacillus cereus 03BB108]
gi|225785651|gb|ACO25868.1| aspartate racemase family protein [Bacillus cereus 03BB102]
gi|228598523|gb|EEK56152.1| Aspartate racemase [Bacillus cereus BGSC 6E1]
Length = 226
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
+E++GA C++M + H + +V SIP LH+G+ AKE+ + +K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVDQNIK--------RIGL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKAT---MEHVII 257
L T T+ FY+ +L + E ++P++ + HVI+
Sbjct: 121 LGTKQTMEQDFYKSRLAHYNIETIIPNEEERNFIHHVIL 159
>gi|421786619|ref|ZP_16223014.1| aspartate racemase [Acinetobacter baumannii Naval-82]
gi|410411961|gb|EKP63829.1| aspartate racemase [Acinetobacter baumannii Naval-82]
Length = 242
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 40/178 (22%)
Query: 84 TIGIIGGVSVSSTL-----------NFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST N LGKL +SAK ++ N E
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQNKLGKL--HSAK--------IILNSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ +L++K + + GA L + LE+AGA CI++ + H + + ++PF
Sbjct: 48 -IAALQAKGLWQE--AGAY---LAEQAQNLEKAGADCILVCTNTMHKVAPQIEDAITVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
+H+ + AKE+ ++ ++ +L T T+ FY+ +LQ++G EV++P+ A
Sbjct: 102 IHIADATAKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDRGIEVIIPNDA 151
>gi|260554538|ref|ZP_05826759.1| aspartate racemase [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|260411080|gb|EEX04377.1| aspartate racemase [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|452955934|gb|EME61328.1| aspartate racemase [Acinetobacter baumannii MSP4-16]
Length = 242
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 40/178 (22%)
Query: 84 TIGIIGGVSVSSTL-----------NFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST N LGKL +SAK ++ N E
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQNKLGKL--HSAK--------IILNSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ +L++K + + GA L + LE+AGA CI++ + H + + ++PF
Sbjct: 48 -IAALQAKGLWQE--AGAY---LAEQAQNLEKAGADCILVCTNTMHKVAPQIEDAITVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
+H+ + AKE+ ++ ++ +L T T+ FY+ +LQ++G EV++P+ A
Sbjct: 102 IHIADATAKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDRGIEVIIPNDA 151
>gi|448357073|ref|ZP_21545780.1| aspartate racemase [Natrialba chahannaoensis JCM 10990]
gi|445650246|gb|ELZ03172.1| aspartate racemase [Natrialba chahannaoensis JCM 10990]
Length = 222
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ GA ++M + H ++E SIPFLH+ + A + ++ +GV
Sbjct: 62 LERGGADFLIMATNTMHKVAPQLTEALSIPFLHIVDVAADAILTEDIQT--------VGV 113
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV-IIPTIEALNHRDMEGARNLLRIGIQ 280
L T T+ A FY+++ + G EVV PD E V I E N E +R L I
Sbjct: 114 LGTKTTMEAPFYRDRFASHGIEVVTPDAEEREAVDTIIFDELTNGLVREDSRELYLSVID 173
Query: 281 LLLVRAVNAVIIGSDEMQGVLPKDD 305
L + +++G E++ ++ + D
Sbjct: 174 TLTAKGAEGLVLGCTEIEMLVEQSD 198
>gi|170733497|ref|YP_001765444.1| aspartate racemase [Burkholderia cenocepacia MC0-3]
gi|169816739|gb|ACA91322.1| aspartate racemase [Burkholderia cenocepacia MC0-3]
Length = 230
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 41/256 (16%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + + +S + H H+ KS V
Sbjct: 2 KTIGLIGGMSWESSAEYYRMINRHS--------------------KTLHGGHHNAKSVLV 41
Query: 143 QLD----------HIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+D H A+ + + LE AGA +V+ + H H + ++PF
Sbjct: 42 TVDFAEIEALQRTHDWAALGERMADAARQLEAAGADLVVLTTNTMHRVHDAIEAAVTLPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKAT 251
LH+ + L+ A ++ R+ +L T T+ FY +L+ + G +V++PD+
Sbjct: 102 LHIADPTGSALRAAGVE--------RVALLGTRYTMELPFYAARLREKFGLDVLVPDERG 153
Query: 252 MEHVIIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK 310
+ V + L H + E +R I L R AVI+G E+ ++ DD L
Sbjct: 154 RDDVHRIIYDELCHGVISEESRATYVSIIDELARRGAQAVILGCTEITLLIGADDSPL-P 212
Query: 311 CIDPMDALARSTVTWA 326
D A++ V WA
Sbjct: 213 VFDTTALHAKAAVEWA 228
>gi|1061000|dbj|BAA32489.1| fomE [Streptomyces wedmorensis]
Length = 233
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 76 DSLLNQANTIGIIGGVSVSSTLNFLGKLV-WYSAKDAEECPPFVVCNDPALNEELFHASV 134
++ ++ IGIIGG+ + NF +LV +A +E P ++ + PA+ L H +
Sbjct: 3 NAAIDHWQKIGIIGGLGPLACANFYMRLVEQTTAGSDQEHPEVLLLSSPAIPSRLDHL-L 61
Query: 135 HSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH 194
S QL AV++ L + AGA+ I MP + A++ +VS +P +
Sbjct: 62 SDGPSPVEQLQ----AVARRL-------QDAGAQLIAMPSVTTQAYYDEVSAAVDVPVVD 110
Query: 195 VGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEH 254
+ VA L+EA + +R + TD L G L + G V PD AT
Sbjct: 111 MLRVVAAGLREAGV--------LRPALAVTDGALKLGLLHRALVDAGLTPVYPDPATQRE 162
Query: 255 VIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIG 293
I +E + ++ A LR ++ R + V++G
Sbjct: 163 -IQECVEMVKSGRVQEASAQLRKAVEGEWTRPGDGVVVG 200
>gi|417552976|ref|ZP_12204046.1| aspartate racemase [Acinetobacter baumannii Naval-81]
gi|417562697|ref|ZP_12213576.1| aspartate racemase [Acinetobacter baumannii OIFC137]
gi|421198122|ref|ZP_15655289.1| aspartate racemase [Acinetobacter baumannii OIFC109]
gi|421457205|ref|ZP_15906542.1| aspartate racemase [Acinetobacter baumannii IS-123]
gi|421633504|ref|ZP_16074133.1| aspartate racemase [Acinetobacter baumannii Naval-13]
gi|421804529|ref|ZP_16240439.1| aspartate racemase [Acinetobacter baumannii WC-A-694]
gi|395525279|gb|EJG13368.1| aspartate racemase [Acinetobacter baumannii OIFC137]
gi|395566090|gb|EJG27735.1| aspartate racemase [Acinetobacter baumannii OIFC109]
gi|400206929|gb|EJO37900.1| aspartate racemase [Acinetobacter baumannii IS-123]
gi|400393235|gb|EJP60281.1| aspartate racemase [Acinetobacter baumannii Naval-81]
gi|408706034|gb|EKL51358.1| aspartate racemase [Acinetobacter baumannii Naval-13]
gi|410411900|gb|EKP63769.1| aspartate racemase [Acinetobacter baumannii WC-A-694]
Length = 242
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 40/178 (22%)
Query: 84 TIGIIGGVSVSSTL-----------NFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST N LGKL +SAK ++ N E
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQNKLGKL--HSAK--------IILNSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ +L++K + + GA L + LE+AGA CI++ + H + + ++PF
Sbjct: 48 -IAALQAKGLWQE--AGAY---LAEQAQNLEKAGADCILVCTNTMHKVAPQIEDAITVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
+H+ + AKE+ ++ ++ +L T T+ FY+ +LQ++G EV++P+ A
Sbjct: 102 IHIADATAKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDRGIEVIIPNDA 151
>gi|424821208|ref|ZP_18246246.1| aspartate racemase [Campylobacter fetus subsp. venerealis NCTC
10354]
gi|342327987|gb|EGU24471.1| aspartate racemase [Campylobacter fetus subsp. venerealis NCTC
10354]
Length = 232
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 44/243 (18%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKSKTV 142
+G+IGG+S STL + LNEE+ +HS K
Sbjct: 7 VGLIGGMSWESTLTYY----------------------KVLNEEIRDRLGGLHSAKCIVY 44
Query: 143 QLD--HIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
LD I SQN K LE+AGA C+++ + H ++ IPF
Sbjct: 45 SLDFHEIEKFQSQNEWQKSGKVLLDAALNLEKAGAECVMICTNTMHKVADMITASLKIPF 104
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
+H+ + A+ LK+ K + +L T T++ FY++K+ EVV+P+K+
Sbjct: 105 IHIADVTAQALKQNGSK--------KALLLGTKYTMTESFYKDKISKNSIEVVVPNKSDT 156
Query: 253 EHVIIPTIEALNHRDMEGARNLLRIGIQLLLVR-AVNAVIIGSDEMQGVLPKDDPLLKKC 311
+ + L +++ + + I I + V++VI+G E+ G+L KDD K
Sbjct: 157 DFINSVIFNELCIGNIKQSSKIEFIKIINESKKLGVDSVILGCTEI-GLLIKDDDCDIKI 215
Query: 312 IDP 314
D
Sbjct: 216 FDT 218
>gi|150018009|ref|YP_001310263.1| aspartate racemase [Clostridium beijerinckii NCIMB 8052]
gi|149904474|gb|ABR35307.1| aspartate racemase [Clostridium beijerinckii NCIMB 8052]
Length = 229
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 79/182 (43%), Gaps = 38/182 (20%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIG+IGG+S ST+ + + V N+ + E+L +HS K
Sbjct: 3 TIGLIGGMSWESTVTY-----------------YQVLNN-VIKEKL--GGLHSAKCLLYS 42
Query: 144 LD--HIRGAVS--------QNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
LD I S Q L LE+AGA IV+ + H V E SIP L
Sbjct: 43 LDFHEIEKCQSTGEWEVSAQILSEAALTLEKAGADFIVICTNTMHKVADKVQEAISIPIL 102
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
H+ E A+ LK A + +I +L T T+ FY+ KL G V++PDK +E
Sbjct: 103 HIAEVTAQVLK--------AENITKIALLGTKYTMEQDFYKSKLIEDGIRVLIPDKEDIE 154
Query: 254 HV 255
V
Sbjct: 155 TV 156
>gi|375135318|ref|YP_004995968.1| aspartate racemase [Acinetobacter calcoaceticus PHEA-2]
gi|325122763|gb|ADY82286.1| aspartate racemase [Acinetobacter calcoaceticus PHEA-2]
Length = 250
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 43/227 (18%)
Query: 84 TIGIIGGVSVSSTLNF-----------LGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST + LGKL +SAK V+ N E
Sbjct: 3 TIGLLGGMSWESTALYYQQINKMVHRKLGKL--HSAK--------VIINSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ +L++K + + GA L + LE+AGA CI++ + H + + ++PF
Sbjct: 48 -IAALQAKGLWQE--AGAY---LAEQAQNLEKAGANCILVCTNTMHKVAAQIEDSITVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
LH+ + AKE+ + ++ +L T T+ FY+ +LQ+ G +VV+P++A
Sbjct: 102 LHIADATAKEILSQNIG--------KVALLGTAFTMEQDFYKARLQDYGIDVVIPNEADR 153
Query: 253 E--HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
+ H II L + + + + I ++ L+ +I+G E+
Sbjct: 154 KIVHSIIYEELCLGVINPDSQQKYIAI-VERLIAEGAQGIILGCTEI 199
>gi|118475485|ref|YP_892551.1| aspartate racemase [Campylobacter fetus subsp. fetus 82-40]
gi|118414711|gb|ABK83131.1| aspartate racemase [Campylobacter fetus subsp. fetus 82-40]
Length = 229
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 44/243 (18%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKSKTV 142
+G+IGG+S STL + LNEE+ +HS K
Sbjct: 4 VGLIGGMSWESTLTYY----------------------KVLNEEIRDRLGGLHSAKCIVY 41
Query: 143 QLD--HIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
LD I SQN K LE+AGA C+++ + H ++ IPF
Sbjct: 42 SLDFHEIEKFQSQNEWQKSGKVLLDAALNLEKAGAECVMICTNTMHKVADMITASLKIPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
+H+ + A+ LK+ K + +L T T++ FY++K+ EVV+P+K+
Sbjct: 102 IHIADVTAQALKQNGSK--------KALLLGTKYTMTESFYKDKISKNSIEVVVPNKSDT 153
Query: 253 EHVIIPTIEALNHRDMEGARNLLRIGIQLLLVR-AVNAVIIGSDEMQGVLPKDDPLLKKC 311
+ + L +++ + + I I + V++VI+G E+ G+L KDD K
Sbjct: 154 DFINSVIFNELCIGNIKQSSKIEFIKIINESKKLGVDSVILGCTEI-GLLIKDDDCDIKI 212
Query: 312 IDP 314
D
Sbjct: 213 FDT 215
>gi|107028677|ref|YP_625772.1| aspartate racemase [Burkholderia cenocepacia AU 1054]
gi|116690164|ref|YP_835787.1| aspartate racemase [Burkholderia cenocepacia HI2424]
gi|105897841|gb|ABF80799.1| Aspartate racemase [Burkholderia cenocepacia AU 1054]
gi|116648253|gb|ABK08894.1| aspartate racemase [Burkholderia cenocepacia HI2424]
Length = 230
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 41/256 (16%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + + +S + H H+ KS V
Sbjct: 2 KTIGLIGGMSWESSAEYYRMINRHS--------------------KALHGGHHNAKSVLV 41
Query: 143 QLD----------HIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+D H A+ + + LE AGA +V+ + H H + ++PF
Sbjct: 42 TVDFAEIEALQRMHDWAALGERMADAARRLEAAGADLVVLTTNTMHRVHDAIEAAVTLPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKAT 251
LH+ + L+ A ++ R+ +L T T+ FY +L+ + G +V++PD+
Sbjct: 102 LHIADPTGSALRAAGVE--------RVALLGTRYTMELPFYAARLREKFGLDVLVPDERG 153
Query: 252 MEHVIIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK 310
+ V + L H + E +R I L R AVI+G E+ ++ DD L
Sbjct: 154 RDDVHRIIYDELCHGVISEESRATYVSIIDGLAQRGAQAVILGCTEITLLIGADDSPL-P 212
Query: 311 CIDPMDALARSTVTWA 326
D A++ V WA
Sbjct: 213 VFDTTALHAKAAVEWA 228
>gi|70730197|ref|YP_259936.1| aspartate racemase [Pseudomonas protegens Pf-5]
gi|68344496|gb|AAY92102.1| aspartate racemase [Pseudomonas protegens Pf-5]
Length = 230
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 10/166 (6%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE GA C+V+ + H G + +PF+H+ + V ++ +A + +G+
Sbjct: 71 LEAGGAECVVLCTNTMHKVAGQIEAAIGVPFVHIADPV--------VQAAQAAGTLSVGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDM-EGARNLLRIGIQ 280
L T T+ F + +L++QG +V++PD A + V E L + E +R L + I
Sbjct: 123 LGTAFTMEQAFLKGRLEDQGLKVLVPDAAQRQAVHRIIYEELCVGVVSESSRRLYQHVID 182
Query: 281 LLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWA 326
L R A+I+G E+ G+L K + +D + AR+ V +A
Sbjct: 183 GLQARGAEAIILGCTEI-GLLLKPEHSALPLLDTTELHARAAVDFA 227
>gi|116696357|ref|YP_841933.1| aspartate racemase [Ralstonia eutropha H16]
gi|113530856|emb|CAJ97203.1| aspartate racemase [Ralstonia eutropha H16]
Length = 240
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
IG++GG+ +T++FL ++V + +D + P VV + P + S L +
Sbjct: 11 IGVLGGMGPLATVDFLDRVVRLTDAVRDQDHLP-MVVAHLPQTPDR----SRSILAGDAL 65
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE-CVAK 201
L ++ + R++ +V+PC+ SH W+ +S + P LH+ CVA
Sbjct: 66 PLPYLLRGIELLNRNQVGL--------VVIPCNTSHHWYAQLSAHSAAPILHIARICVAA 117
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
P + GS + +LAT L++G YQ L +G V+P + V I
Sbjct: 118 -------LPADTGS---VAILATRGALASGIYQAALDARGIAAVVPPEPVQLQVDA-CIR 166
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM----QGVLPKDDPLLKKCIDPMDA 317
A+ ++ A L + + V A I+G E+ +G+ PL+ +D +
Sbjct: 167 AVKAGALDQAGEALGSALARIAALGVGAAIMGCTEIPVAARGL--AAPPLM--LVDSTNE 222
Query: 318 LARSTVTWA 326
LAR+TV +A
Sbjct: 223 LARATVAFA 231
>gi|421626343|ref|ZP_16067172.1| aspartate racemase [Acinetobacter baumannii OIFC098]
gi|421651917|ref|ZP_16092284.1| aspartate racemase [Acinetobacter baumannii OIFC0162]
gi|421695016|ref|ZP_16134630.1| aspartate racemase [Acinetobacter baumannii WC-692]
gi|425750196|ref|ZP_18868163.1| aspartate racemase [Acinetobacter baumannii WC-348]
gi|445460018|ref|ZP_21447927.1| aspartate racemase [Acinetobacter baumannii OIFC047]
gi|404566584|gb|EKA71726.1| aspartate racemase [Acinetobacter baumannii WC-692]
gi|408507850|gb|EKK09544.1| aspartate racemase [Acinetobacter baumannii OIFC0162]
gi|408695614|gb|EKL41169.1| aspartate racemase [Acinetobacter baumannii OIFC098]
gi|425487598|gb|EKU53956.1| aspartate racemase [Acinetobacter baumannii WC-348]
gi|444773253|gb|ELW97349.1| aspartate racemase [Acinetobacter baumannii OIFC047]
Length = 242
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 40/178 (22%)
Query: 84 TIGIIGGVSVSSTL-----------NFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST N LGKL +SAK ++ N E
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQNKLGKL--HSAK--------IILNSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ L+SK + + GA L + LE+AGA CI++ + H + + ++PF
Sbjct: 48 -IAVLQSKGLWQE--AGAY---LAEQAQNLEKAGADCILVCTNTMHKVAPQIEDAITVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
+H+ + AKE+ ++ ++ +L T T+ FY+ +LQ+ G EV++P+ A
Sbjct: 102 IHIADATAKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDHGIEVIIPNDA 151
>gi|254251950|ref|ZP_04945268.1| Aspartate racemase [Burkholderia dolosa AUO158]
gi|124894559|gb|EAY68439.1| Aspartate racemase [Burkholderia dolosa AUO158]
Length = 230
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 109/258 (42%), Gaps = 45/258 (17%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + + + N + + H H+ KS V
Sbjct: 2 KTIGLIGGMSWESSAEY-----------------YRLINR---HSKALHGGHHNAKSVLV 41
Query: 143 QLD----------HIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+D H A+ + + LE AGA +V+ + H H + ++PF
Sbjct: 42 TVDFAEIEALQRAHDWAALGERMADAARRLEAAGAELVVLTTNTMHRVHDAIEAAVTLPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKAT 251
LH+ + L++A + R+ +L T T+ FY ++L+++ +V+ PD+
Sbjct: 102 LHIADPTGAALRDAGIG--------RVALLGTRYTMELPFYAQRLRDKFDIDVLTPDERQ 153
Query: 252 MEHVIIPTIEALNHR--DMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL-PKDDPLL 308
+ V + L H + E +RI I+ L R AVI+G E+ ++ D PL
Sbjct: 154 RDDVHRIIYDELCHGIVEAESRATYVRI-IESLAQRGAQAVILGCTEITLLIGSADSPL- 211
Query: 309 KKCIDPMDALARSTVTWA 326
D A++ V WA
Sbjct: 212 -PVFDTTALHAKAAVEWA 228
>gi|445440566|ref|ZP_21441821.1| aspartate racemase [Acinetobacter baumannii WC-A-92]
gi|444765861|gb|ELW90144.1| aspartate racemase [Acinetobacter baumannii WC-A-92]
Length = 242
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 40/178 (22%)
Query: 84 TIGIIGGVSVSST-----------LNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST N LGKL +SAK ++ N E
Sbjct: 3 TIGLLGGMSWESTSLYYQQINRMVQNKLGKL--HSAK--------IILNSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ +L++K + + GA L + LE+AGA CI++ + H + + ++PF
Sbjct: 48 -IAALQAKGLWQE--AGAY---LAEQAQNLEKAGADCILVCTNTMHKVAPQIEDAITVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
+H+ + AKE+ ++ ++ +L T T+ FY+ +LQ++G EV++P+ A
Sbjct: 102 IHIADATAKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDRGIEVIIPNDA 151
>gi|193077759|gb|ABO12629.2| Aspartate racemase [Acinetobacter baumannii ATCC 17978]
Length = 242
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 40/178 (22%)
Query: 84 TIGIIGGVSVSST-----------LNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST N LGKL +SAK ++ N E
Sbjct: 3 TIGLLGGMSWESTSLYYQQINRMVQNKLGKL--HSAK--------IILNSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ +L+SK + + GA L + LE+AGA CI++ + H + + ++PF
Sbjct: 48 -IAALQSKGLWQE--AGAY---LAEQAQNLEKAGADCILVCTNTMHKVAPQIEDAITVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
+H+ + AKE+ ++ ++ +L T T+ FY+ +LQ+ G EV++P+ A
Sbjct: 102 IHIADATAKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDLGIEVIIPNDA 151
>gi|403676295|ref|ZP_10938294.1| aspartate racemase [Acinetobacter sp. NCTC 10304]
Length = 242
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 40/178 (22%)
Query: 84 TIGIIGGVSVSSTL-----------NFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST N LGKL +SAK ++ N E
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQNKLGKL--HSAK--------IILNSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ L+SK + + GA L + LE+AGA CI++ + H + + ++PF
Sbjct: 48 -IAVLQSKGLWQE--AGAY---LAEQAQNLEKAGADCILVCTNTMHKVAPQIEDAITVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
+H+ + AKE+ ++ ++ +L T T+ FY+ +LQ+ G EV++P+ A
Sbjct: 102 IHIADATAKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDHGIEVIIPNDA 151
>gi|78066918|ref|YP_369687.1| aspartate racemase [Burkholderia sp. 383]
gi|77967663|gb|ABB09043.1| Aspartate racemase [Burkholderia sp. 383]
Length = 230
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 107/256 (41%), Gaps = 41/256 (16%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + + +S + H H+ KS V
Sbjct: 2 KTIGLIGGMSWESSAEYYRMINRHS--------------------KALHGGHHNAKSVLV 41
Query: 143 QLD----------HIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+D H A+ + + LE AGA +V+ + H + ++PF
Sbjct: 42 TVDFAEIEALQRTHDWAALGERMAGAARQLEAAGADLVVLTTNTMHRVCDAIEAAVTLPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKAT 251
LH+ + L++A ++ R+ +L T T+ FY E+L+ + G EV++PD+
Sbjct: 102 LHIADPTGSALRDAGVE--------RVALLGTRYTMELPFYAERLRGKFGMEVLVPDERG 153
Query: 252 MEHVIIPTIEALNHRDME-GARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK 310
+ V + L H + +R I+ L R AVI+G E+ ++ DD L
Sbjct: 154 RDDVHRIIYDELCHGIISPESRATYVTIIEELARRGAQAVILGCTEITLLIGADDSPL-P 212
Query: 311 CIDPMDALARSTVTWA 326
D A++ V WA
Sbjct: 213 VFDTTALHAKAAVEWA 228
>gi|423523432|ref|ZP_17499905.1| aspartate racemase [Bacillus cereus HuA4-10]
gi|401171674|gb|EJQ78900.1| aspartate racemase [Bacillus cereus HuA4-10]
Length = 227
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
+E +GA C++M + H + +V + SIP LH+G+ AK++ E +K RIG+
Sbjct: 70 VEHSGAECLLMCSNTVHLFAEEVEKAISIPLLHIGDVSAKKMVEHNIK--------RIGL 121
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVII 257
L T T+ FY +L E ++P ++ + HVI+
Sbjct: 122 LGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVIL 160
>gi|227524709|ref|ZP_03954758.1| aspartate racemase [Lactobacillus hilgardii ATCC 8290]
gi|227088193|gb|EEI23505.1| aspartate racemase [Lactobacillus hilgardii ATCC 8290]
Length = 242
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 111/253 (43%), Gaps = 26/253 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
N IIGG+ +T F+ L + AK +E +++ N + + + HS +
Sbjct: 3 NFFTIIGGMGTEATELFIHILNERTPAKKDQEYLNYILVNHSTIPDRTDYILDHSKPNPF 62
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+ L +++++ + Q V+PC+ +H D+ S+P LH+ K
Sbjct: 63 IPL-------AEDIKQQ----SQLDPDFFVIPCNTAHYSFDDLQALTSVPILHMPRETVK 111
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA----TMEHVII 257
E+K + S R+G++AT TL G Y +++++ G+++V PD+ TME +I
Sbjct: 112 EIKH------DVPSAKRVGLIATRGTLHDGIYDQEIRHAGYDLVKPDEKTANQTME-LIY 164
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I+ N D + +L + + + VI+G E+ + ID
Sbjct: 165 DDIKEKNQVDGDLYHQILSTMVNKF---SCDVVILGCTELSVAQQRAGDHSFPVIDAQTV 221
Query: 318 LARSTVTWARSNK 330
L + T+ A N+
Sbjct: 222 LVKRTIELALKNR 234
>gi|392392204|ref|YP_006428806.1| aspartate racemase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390523282|gb|AFL99012.1| aspartate racemase [Desulfitobacterium dehalogenans ATCC 51507]
Length = 236
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 113/247 (45%), Gaps = 29/247 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IGI+GG+ +T++ K+V + + +++ H + + +L
Sbjct: 5 IGILGGMGPLATVDMFNKIVTLT--------------EATRDQDHIHLIIDNYPGIPNRL 50
Query: 145 DHIRG---AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
D + G + + + L+ GA I+MPC+ +H ++ + + I F+++ E AK
Sbjct: 51 DFLLGDGESPEKAMVESALKLQSMGADAIIMPCNTAHYFYDAIKKHLRIDFINMIEETAK 110
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
E+K+ E+ +IG+LAT T + G Y + + EV+ PD+ + + +
Sbjct: 111 EIKK------ESTRCKKIGLLATRGTYNTGVYDKTFASYDMEVIKPDEEGRQAIADLILA 164
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNA--VIIGSDEMQGVLPKDDPLLKKCIDPMDALA 319
+D ++ R+ QL + NA +++G E+ K + + +K IDP LA
Sbjct: 165 IKVGQDTFDLTSIYRVIAQL---KKKNAEILVLGCTELPIAFEKFN-INEKYIDPTKILA 220
Query: 320 RSTVTWA 326
S + +A
Sbjct: 221 CSAIRYA 227
>gi|291568578|dbj|BAI90850.1| putative aspartate racemase [Arthrospira platensis NIES-39]
Length = 262
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 22/249 (8%)
Query: 86 GIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQLD 145
GIIGG+ + + F L+ +++ C D + F + L +T L
Sbjct: 14 GIIGGLGPLAHIEFERLLLAFNSSRG-------ACGDRQ-HPIWFLINATDLPDRTQSLL 65
Query: 146 HIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKE 205
+ + + L LE AGA +V+ C+ SH ++ V +IP++H+ + + +K
Sbjct: 66 GNQPSCAPGLVKYGQILEVAGADFLVITCNTSHGFYDLVQSQLNIPWIHIMQETVRFIK- 124
Query: 206 AKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP------DKATMEHVIIPT 259
L R+G+LAT+ TL A YQ+ L G + P + M + P
Sbjct: 125 -----LHYPELNRVGILATNGTLQAHLYQDSLTAAGLTAIAPILNSELQQDIMNAIYHPI 179
Query: 260 --IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I+A + + N+L+ ++ L + + +I G E+ VL D IDP++
Sbjct: 180 WGIKATGVQILPPPINILKTAVKWLENQGADLLIAGCTEISVVLKLLDTSSLIAIDPLEI 239
Query: 318 LARSTVTWA 326
LA T+ A
Sbjct: 240 LANLTLDLA 248
>gi|323526636|ref|YP_004228789.1| aspartate racemase [Burkholderia sp. CCGE1001]
gi|323383638|gb|ADX55729.1| aspartate racemase [Burkholderia sp. CCGE1001]
Length = 232
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ GA +++ + H + + +PFLH+ + L++A ++ R+G+
Sbjct: 71 LERGGAELVMLATNTMHRVYESIERAIHVPFLHIADPTGSALRKAGVE--------RVGL 122
Query: 222 LATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPTIEALNHRDMEG-ARNLLRIGI 279
L T T+ FY +L+ + G E ++PD+A V + L H +++ +R + + I
Sbjct: 123 LGTRYTMEQTFYTGRLRERYGLETLVPDEAQRADVHRIIYDELCHGNVKSESRMVYQTVI 182
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWA 326
+ L R AVI+G E+ ++ +D L D A++ V WA
Sbjct: 183 ESLRARGAEAVILGCTEITLLIKPEDSAL-PVFDTTALHAQAAVEWA 228
>gi|171318536|ref|ZP_02907687.1| aspartate racemase [Burkholderia ambifaria MEX-5]
gi|171096278|gb|EDT41185.1| aspartate racemase [Burkholderia ambifaria MEX-5]
Length = 230
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 11/167 (6%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE AGA +V+ + H HG + ++PFLH+ + L+ A ++ + +
Sbjct: 71 LEAAGADLVVLTTNTMHRVHGAIEAAVALPFLHIADPTGAALRAAGVE--------HVAL 122
Query: 222 LATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIG-I 279
L T T+ FY ++L ++ G +V++PD+A V + L H ++ A + I
Sbjct: 123 LGTRYTMELPFYAQRLGDKFGLDVLVPDEAARSDVHRIIYDELCHGVIDAASRATYVAII 182
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWA 326
L R AVI+G E+ ++ DD L D A++ V WA
Sbjct: 183 DELAKRGAQAVILGCTEITLLIGADDSPL-PVFDTTALHAKAAVEWA 228
>gi|407714082|ref|YP_006834647.1| aspartate racemase [Burkholderia phenoliruptrix BR3459a]
gi|407236266|gb|AFT86465.1| aspartate racemase [Burkholderia phenoliruptrix BR3459a]
Length = 232
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ GA +++ + H + + +PFLH+ + L++A ++ R+G+
Sbjct: 71 LERGGAELVMLATNTMHRVYESIERAIHVPFLHIADPTGSALRKAGVE--------RVGL 122
Query: 222 LATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPTIEALNHRDMEG-ARNLLRIGI 279
L T T+ FY +L+ + G E ++PD+A V + L H +++ +R + + I
Sbjct: 123 LGTRYTMEQTFYTGRLRERYGLETLVPDEAERAGVHRIIYDELCHGNVKSESRAVYQTVI 182
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWA 326
+ L R AVI+G E+ ++ +D L D A++ V WA
Sbjct: 183 ESLRARGAEAVILGCTEITLLIKPEDSAL-PVFDTTALHAQAAVEWA 228
>gi|227510557|ref|ZP_03940606.1| aspartate racemase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227190209|gb|EEI70276.1| aspartate racemase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 242
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 111/253 (43%), Gaps = 26/253 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
N IIGG+ +T F+ L + AK +E +++ N + + + HS +
Sbjct: 3 NFFTIIGGMGTEATELFIHILNERTPAKKDQEYLNYILVNHSTIPDRTDYILDHSKPNPF 62
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+ L +++++ + Q V+PC+ +H D+ S+P LH+ K
Sbjct: 63 IPL-------AEDIKQQ----SQLDPDFFVIPCNTAHYSFDDLQALTSVPILHMPRETVK 111
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA----TMEHVII 257
++K + S R+G++AT TL G Y ++++ G+++V PD+ TME +I
Sbjct: 112 DIKH------DVPSAKRVGLIATRGTLHDGIYDREIRHAGYDLVKPDEKTANQTME-LIY 164
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I+ N D + +L + + + VI+G E+ + ID
Sbjct: 165 DDIKEKNQVDGDLYHQILSTMVNKF---SCDVVILGCTELSVAQQRAGDHSFPVIDAQTV 221
Query: 318 LARSTVTWARSNK 330
LA+ T+ A N+
Sbjct: 222 LAKRTIELALKNR 234
>gi|254302674|ref|ZP_04970032.1| aspartate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|148322866|gb|EDK88116.1| aspartate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
Length = 231
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 79/171 (46%), Gaps = 12/171 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+AGA IV+ + H + + +P LH+ E A ELK+A +K +IG+
Sbjct: 71 LEKAGADFIVICTNTMHKVVSGIKKYTKLPILHIAEMTAIELKKAGIK--------KIGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV--IIPTIEALNHRDMEGARNLLRIGI 279
L T T+ FY++ L + G EVV+P+ +E V +I L E LRI I
Sbjct: 123 LGTKYTMQQDFYKQILIDNGIEVVIPNSKDIEIVNSVIFNELCLGKIKKESKEEYLRI-I 181
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNK 330
+ L VI+G E+ G+L K + D + A S +A K
Sbjct: 182 KDLSKAGAKGVILGCTEI-GLLIKQEDTDVPLFDTTNIHATSAALYAIEEK 231
>gi|419645247|ref|ZP_14176803.1| putative racemase [Campylobacter jejuni subsp. jejuni LMG 9081]
gi|380620648|gb|EIB39516.1| putative racemase [Campylobacter jejuni subsp. jejuni LMG 9081]
Length = 231
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 103/236 (43%), Gaps = 37/236 (15%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST+ + + + A+N++L + + +V
Sbjct: 3 TIGIIGGMSFESTITYYKTI------------------NQAINDKLKSLNSAKILLYSVN 44
Query: 144 LDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ I SQ+ + A LE AGA I++ + H ++ + +IP LH+
Sbjct: 45 FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ AK LK+ ++ +IG+L T T++ FY++ L + V++P ++ V
Sbjct: 105 AKSSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKVLIEENISVIIPSDEDIKIV 156
Query: 256 --IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK 309
II E L I I+ L + V V++ E+ ++ K+D +K
Sbjct: 157 NDIIFNELCKGEIKQESKEKYLNI-IKKLQEKGVKGVLLACTEIGLLISKNDTNIK 211
>gi|421526773|ref|ZP_15973379.1| aspartate racemase [Fusobacterium nucleatum ChDC F128]
gi|402256881|gb|EJU07357.1| aspartate racemase [Fusobacterium nucleatum ChDC F128]
Length = 231
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 12/171 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+AGA IV+ + H + + +P LH+ E A ELK+A ++ +IG+
Sbjct: 71 LEKAGADFIVICTNTMHKVVSGIKKYTKLPILHIAEMTAIELKKAGIR--------KIGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV--IIPTIEALNHRDMEGARNLLRIGI 279
L T T+ FY++ L + G EVV+P+ +E V +I L E LRI I
Sbjct: 123 LGTKYTMQQDFYKQILIDNGIEVVIPNSKDIEIVNSVIFNELCLGKIKKESKDKYLRI-I 181
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNK 330
+ L V +I+G E+ G+L K + D + A S +A K
Sbjct: 182 ENLSKDGVEGIILGCTEI-GLLVKQEDTDIPLFDTTNIHATSAALYAIEEK 231
>gi|399020544|ref|ZP_10722673.1| aspartate racemase [Herbaspirillum sp. CF444]
gi|398094751|gb|EJL85108.1| aspartate racemase [Herbaspirillum sp. CF444]
Length = 491
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 33/254 (12%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
IG++GGV ++T++F+ K++ + A+D + VV ++P + + ++ +
Sbjct: 251 IGVVGGVGPAATVDFIEKVIRNTPAARDQDHIK-LVVEHNPKIPD----------RTDNL 299
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV-GECVAK 201
D V+ KR LE A I +PC+ +HA+ + SIP +++ GE V+
Sbjct: 300 IGDGADPTVAIYAACKR--LENDNADMIAIPCNTAHAFVERIQAYLSIPIVNMLGETVSY 357
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
K G IG+LAT T+++ Y ++ F +V+PD A + V++ I
Sbjct: 358 IEKHH-------GDKTSIGLLATSGTIASRVYHHNIERSKFRMVVPD-AEHQAVVMDVIY 409
Query: 262 ALNHRDM----EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPL-----LKKCI 312
+ R L+ I L+ + +++G E+ ++ +DD +
Sbjct: 410 GAQGVKAGFVNDAVRARLKRAIAYLVANGADVIVLGCTELPLLIAQDDKFDVGGKQVPVL 469
Query: 313 DPMDALARSTVTWA 326
DP + LAR V A
Sbjct: 470 DPTEILARKCVALA 483
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLK 138
+ +A ++GI+GG+ + + K+ +AK A V+ A ++ + A + +
Sbjct: 6 IQRAMSVGIVGGLGAIGSADLYAKMTKVAAKAAPHERIKVLFGQQAFDD-IDMAGAENAE 64
Query: 139 SKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
+ +L V LR E+ + +++PC ISH + +V IP + +
Sbjct: 65 TNARKL-----YVFDMLRE----FEERKSSAVLLPCFISHTFLDEVQAEIGIPVIDMVAA 115
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEH 254
+ + L + +L L+ +IGVL + G +++ +++ P A ++H
Sbjct: 116 IRRHLVQ-RLPKLQ-----KIGVLTSSYVRKKGLFEKYFGEDDVQLLYP-AAAIQH 164
>gi|184158722|ref|YP_001847061.1| aspartate racemase [Acinetobacter baumannii ACICU]
gi|332873715|ref|ZP_08441658.1| aspartate racemase [Acinetobacter baumannii 6014059]
gi|384131247|ref|YP_005513859.1| Aspartate racemase [Acinetobacter baumannii 1656-2]
gi|387123343|ref|YP_006289225.1| aspartate racemase [Acinetobacter baumannii MDR-TJ]
gi|407933347|ref|YP_006848990.1| aspartate racemase [Acinetobacter baumannii TYTH-1]
gi|417569283|ref|ZP_12220141.1| aspartate racemase [Acinetobacter baumannii OIFC189]
gi|417578366|ref|ZP_12229203.1| aspartate racemase [Acinetobacter baumannii Naval-17]
gi|417869036|ref|ZP_12514031.1| aspartate racemase [Acinetobacter baumannii ABNIH1]
gi|417873997|ref|ZP_12518858.1| aspartate racemase [Acinetobacter baumannii ABNIH2]
gi|417879303|ref|ZP_12523877.1| aspartate racemase [Acinetobacter baumannii ABNIH3]
gi|417880925|ref|ZP_12525297.1| aspartate racemase [Acinetobacter baumannii ABNIH4]
gi|421629795|ref|ZP_16070510.1| aspartate racemase [Acinetobacter baumannii OIFC180]
gi|421686427|ref|ZP_16126182.1| aspartate racemase [Acinetobacter baumannii IS-143]
gi|421705264|ref|ZP_16144701.1| aspartate racemase [Acinetobacter baumannii ZWS1122]
gi|421709053|ref|ZP_16148419.1| aspartate racemase [Acinetobacter baumannii ZWS1219]
gi|421792897|ref|ZP_16229042.1| aspartate racemase [Acinetobacter baumannii Naval-2]
gi|424051775|ref|ZP_17789307.1| aspartate racemase [Acinetobacter baumannii Ab11111]
gi|424063322|ref|ZP_17800807.1| aspartate racemase [Acinetobacter baumannii Ab44444]
gi|425751288|ref|ZP_18869236.1| aspartate racemase [Acinetobacter baumannii Naval-113]
gi|445473451|ref|ZP_21452776.1| aspartate racemase [Acinetobacter baumannii OIFC338]
gi|445483657|ref|ZP_21456427.1| aspartate racemase [Acinetobacter baumannii Naval-78]
gi|183210316|gb|ACC57714.1| Aspartate racemase [Acinetobacter baumannii ACICU]
gi|322507467|gb|ADX02921.1| Aspartate racemase [Acinetobacter baumannii 1656-2]
gi|332738103|gb|EGJ68987.1| aspartate racemase [Acinetobacter baumannii 6014059]
gi|342228939|gb|EGT93810.1| aspartate racemase [Acinetobacter baumannii ABNIH3]
gi|342229937|gb|EGT94782.1| aspartate racemase [Acinetobacter baumannii ABNIH2]
gi|342231443|gb|EGT96252.1| aspartate racemase [Acinetobacter baumannii ABNIH1]
gi|342239410|gb|EGU03815.1| aspartate racemase [Acinetobacter baumannii ABNIH4]
gi|385877835|gb|AFI94930.1| aspartate racemase [Acinetobacter baumannii MDR-TJ]
gi|395553506|gb|EJG19512.1| aspartate racemase [Acinetobacter baumannii OIFC189]
gi|395569063|gb|EJG29733.1| aspartate racemase [Acinetobacter baumannii Naval-17]
gi|404569029|gb|EKA74124.1| aspartate racemase [Acinetobacter baumannii IS-143]
gi|404665331|gb|EKB33294.1| aspartate racemase [Acinetobacter baumannii Ab11111]
gi|404674499|gb|EKB42243.1| aspartate racemase [Acinetobacter baumannii Ab44444]
gi|407188533|gb|EKE59772.1| aspartate racemase [Acinetobacter baumannii ZWS1122]
gi|407188626|gb|EKE59864.1| aspartate racemase [Acinetobacter baumannii ZWS1219]
gi|407901928|gb|AFU38759.1| aspartate racemase [Acinetobacter baumannii TYTH-1]
gi|408699144|gb|EKL44624.1| aspartate racemase [Acinetobacter baumannii OIFC180]
gi|410398988|gb|EKP51191.1| aspartate racemase [Acinetobacter baumannii Naval-2]
gi|425500231|gb|EKU66256.1| aspartate racemase [Acinetobacter baumannii Naval-113]
gi|444768225|gb|ELW92442.1| aspartate racemase [Acinetobacter baumannii Naval-78]
gi|444769290|gb|ELW93486.1| aspartate racemase [Acinetobacter baumannii OIFC338]
Length = 242
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 40/178 (22%)
Query: 84 TIGIIGGVSVSSTL-----------NFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST N LGKL +SAK ++ N E
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQNKLGKL--HSAK--------IILNSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ +L+SK + + GA L + LE+AGA CI++ + H + + ++PF
Sbjct: 48 -IAALQSKGLWQE--AGAY---LAEQAQNLEKAGADCILVCTNTMHKVAPQIEDAITVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
+H+ + AKE+ ++ ++ +L T T+ FY+ +LQ+ G EV++P+ A
Sbjct: 102 IHIADATAKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDLGIEVIIPNDA 151
>gi|374996111|ref|YP_004971610.1| aspartate racemase [Desulfosporosinus orientis DSM 765]
gi|357214477|gb|AET69095.1| aspartate racemase [Desulfosporosinus orientis DSM 765]
Length = 237
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE AGA I++ + H V SIP LH+ + A ++ K++ +G+
Sbjct: 71 LEGAGAEVILICTNTMHKVAEQVENNISIPLLHIADITADRIQRNKIQT--------VGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV--IIPTIEALNHRDMEGARNLLRIGI 279
L T T+ FY+ +L+ +G +V++PD E V +I L + + RI I
Sbjct: 123 LGTKYTMEQDFYKLRLETRGIKVLIPDNKDKEVVNRVIYQELCLGKINQDSKEAFKRI-I 181
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNK 330
++L+ R VI+G E+ G+L ++ + + D A+ V +A N+
Sbjct: 182 KMLVERGAEGVILGCTEI-GLLIGEEDVSVRIFDTALIHAKGAVDYALENE 231
>gi|57237092|ref|YP_178104.1| aspartate racemase [Campylobacter jejuni RM1221]
gi|384442438|ref|YP_005658690.1| Aspartate racemase [Campylobacter jejuni subsp. jejuni S3]
gi|419634364|ref|ZP_14166754.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 23269]
gi|424847335|ref|ZP_18271914.1| putative racemase [Campylobacter jejuni subsp. jejuni NW]
gi|57165896|gb|AAW34675.1| aspartate racemase, putative [Campylobacter jejuni RM1221]
gi|315057525|gb|ADT71854.1| Aspartate racemase [Campylobacter jejuni subsp. jejuni S3]
gi|356485353|gb|EHI15348.1| putative racemase [Campylobacter jejuni subsp. jejuni NW]
gi|380609340|gb|EIB29015.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 23269]
Length = 231
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 34/172 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST+ + + + A+N++L + + +V
Sbjct: 3 TIGIIGGMSFESTITYYKTI------------------NQAINDKLKSLNSAKILLYSVN 44
Query: 144 LDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ I SQ+ + A LE AGA I++ + H ++ + +IP LH+
Sbjct: 45 FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ AK LK+ ++ +IG+L T T++ FY++ L + V++P
Sbjct: 105 AKSSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKMLIEENISVIIP 148
>gi|317484334|ref|ZP_07943255.1| aspartate racemase [Bilophila wadsworthia 3_1_6]
gi|316924412|gb|EFV45577.1| aspartate racemase [Bilophila wadsworthia 3_1_6]
Length = 250
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 117/261 (44%), Gaps = 36/261 (13%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAE-ECPPFVVCNDPALNEELFHASVHSL 137
+ Q IGI+GGV + L+ KL ++ +A+ E P ++ + P + L
Sbjct: 1 MRQDERIGIVGGVGPHAGLDLTRKLFDHTRAEADQEHLPVMLYSFP----DRIGERPAFL 56
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISH-------AWHGDVSEGCSI 190
KT D+ A+ + A L +AGA I MPC+ +H A + G +
Sbjct: 57 LGKTA--DNPGEAIGDIM----AELARAGATVIGMPCNTAHSPRILDAALEKLNATGRPV 110
Query: 191 PFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
F+H+ + V + +++ G G R+G+L+T ATL YQ+ L+ G E + P
Sbjct: 111 RFVHMIDAVVRHVRQ------RCGEGARVGILSTLATLETRLYQDSLERAGLEALHPAPD 164
Query: 251 TMEHVIIPTIEALNHRDME-GARNLL--RIGIQLL-----LVRAVNAVIIGSDEMQGVLP 302
V EA+++R+ ARN + R LL L +A+I+G E+ LP
Sbjct: 165 GCARV----QEAISNREYGIKARNPVTERARADLLDEARRLAGNADAIILGCTEIPLALP 220
Query: 303 KDDPLLKKCIDPMDALARSTV 323
+ + ID D LAR V
Sbjct: 221 EKELGGVPLIDATDVLARELV 241
>gi|153951898|ref|YP_001397342.1| putative aspartate racemase [Campylobacter jejuni subsp. doylei
269.97]
gi|152939344|gb|ABS44085.1| putative aspartate racemase [Campylobacter jejuni subsp. doylei
269.97]
Length = 231
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 34/172 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST+ + + + A+N++L + ++ +V
Sbjct: 3 TIGIIGGMSFESTITYYKTI------------------NQAINDKLKSLNSANILLYSVN 44
Query: 144 LDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ I SQ+ + A LE AGA I++ + H ++ + +IP LH+
Sbjct: 45 FEEIENLQSQDKWQEAAQILSQCAKKLELAGASFIIIATNTMHKVFDEIQQNINIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ AK LK+ ++ +IG+L T T++ FY++ L + V++P
Sbjct: 105 AKSSAKALKQENIQ--------KIGLLGTKYTMAQDFYKKMLIEENISVIIP 148
>gi|302386999|ref|YP_003822821.1| aspartate racemase [Clostridium saccharolyticum WM1]
gi|302197627|gb|ADL05198.1| aspartate racemase [Clostridium saccharolyticum WM1]
Length = 230
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIG++GG+S ST+ + K E + + L+ ++ +
Sbjct: 3 TIGLLGGMSWESTVTYY--------KIVNETVKKQLGGLHSAKVLLYSVDFSEIEKCQAE 54
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
D + AV + K LE+AGA IV+ + H + E SIP +H+ E A EL
Sbjct: 55 GDWEKSAVILSTAAKN--LEKAGADFIVICTNTMHKVASRIQENISIPIIHIAEATADEL 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
K + ++ +L T T++ FY+EKL N G V++PD+ +E +
Sbjct: 113 KRHNI--------TKVALLGTKYTMTQDFYKEKLINAGITVLIPDEQEIETI 156
>gi|237745210|ref|ZP_04575691.1| aspartate racemase [Fusobacterium sp. 7_1]
gi|289764682|ref|ZP_06524060.1| aspartate racemase [Fusobacterium sp. D11]
gi|422933113|ref|ZP_16966037.1| aspartate racemase [Fusobacterium nucleatum subsp. animalis ATCC
51191]
gi|229432439|gb|EEO42651.1| aspartate racemase [Fusobacterium sp. 7_1]
gi|289716237|gb|EFD80249.1| aspartate racemase [Fusobacterium sp. D11]
gi|339891724|gb|EGQ80672.1| aspartate racemase [Fusobacterium nucleatum subsp. animalis ATCC
51191]
Length = 231
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 110/259 (42%), Gaps = 42/259 (16%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS--KT 141
TIG+IGG+S ST+ + + + N+ N+ +HS K +
Sbjct: 3 TIGLIGGMSWESTVTY-----------------YQIINEVVKNK---LGGLHSAKCVLYS 42
Query: 142 VQLDHIRGAV-------SQNLRHKRAF-LEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
V + I S + K A LE+AGA IV+ + H + + +P L
Sbjct: 43 VDFEEIEECQKKGDWDRSAEILGKVALSLEKAGADFIVICTNTMHKVVSGIKKYTKLPIL 102
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
H+ E A ELK+A +K +IG+L T T+ FY++ L + G EVV+P+ +E
Sbjct: 103 HIAEMTAIELKKAGIK--------KIGLLGTKYTMQQDFYKQILIDNGIEVVIPNSKDIE 154
Query: 254 HV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC 311
V +I L E LRI I+ L VI+G E+ G+L K +
Sbjct: 155 IVNSVIFNELCLGKIKKESKDEYLRI-IRDLSKAGAKGVILGCTEI-GLLIKQEDTDVPL 212
Query: 312 IDPMDALARSTVTWARSNK 330
D + A S +A K
Sbjct: 213 FDTTNIHATSAALYAIEGK 231
>gi|88704993|ref|ZP_01102705.1| aspartate racemase [Congregibacter litoralis KT71]
gi|88700688|gb|EAQ97795.1| aspartate racemase [Congregibacter litoralis KT71]
Length = 234
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 121/264 (45%), Gaps = 49/264 (18%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDP-------ALNEELF 130
+N++ T+GI+GG+ ++T++ + +++ + A D + +V N+P AL E+
Sbjct: 1 MNRSKTVGILGGMGPAATVDLMQRVIAATPASDDCDHIRMLVDNNPRVPSRIKALIEKTG 60
Query: 131 HASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSI 190
+ V +L + QL VSQ GA + MPC+ +H ++ +++ +
Sbjct: 61 PSPVPALTAMAQQL------VSQ------------GADFLAMPCNTAHHFYPELAAAVDV 102
Query: 191 PFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
PFL++ E VA+ + + + G+ R+G+LA+ A Y+ +G V P+ +
Sbjct: 103 PFLNIMELVARHICAS-----QPGTA-RVGLLASSALSQIRLYEGSFDARGMTAVYPEAS 156
Query: 251 --TMEHVIIPTIEALNHRD------MEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP 302
T +I I+A D + A L G+ LL+ A + + S +++ LP
Sbjct: 157 QQTRLMALIQAIKANRGEDCGYTAFQDCADLLASAGVDCLLI-ACTELSVVSRQLKNALP 215
Query: 303 KDDPLLKKCIDPMDALARSTVTWA 326
D D LAR V +A
Sbjct: 216 --------VYDAADILAREVVAYA 231
>gi|260890046|ref|ZP_05901309.1| hypothetical protein GCWU000323_01208 [Leptotrichia hofstadii
F0254]
gi|260860069|gb|EEX74569.1| aspartate racemase [Leptotrichia hofstadii F0254]
Length = 231
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 107/230 (46%), Gaps = 34/230 (14%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKD------AEECPPFVVCNDPALNEELFHASVHSL 137
TIG+IGG+S ST+ + K++ + K+ + +C + V D EE A+ +
Sbjct: 5 TIGLIGGMSWESTVTYY-KIINETVKERLGGLHSAKCILYSV--DFQEIEEC-QANGNWE 60
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
KS I G + N LE+AGA IV+ + H + E SIP LH+ E
Sbjct: 61 KS-----GEILGEAAYN-------LEKAGADFIVICTNTMHKVVNQIKEKISIPILHIAE 108
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV-- 255
A+++ E LK I +L T T+ FY+ KL +G V++PDK +E +
Sbjct: 109 MTAEKILEKGLK--------NIALLGTKYTMEQDFYKSKLIEKGINVIIPDKNDIEIINK 160
Query: 256 IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
+I L + + L I + L + +I+G E+ G+L K++
Sbjct: 161 VIYDELCLGTINSNSKKKFLEI-VDKLRSKGAEGIILGCTEI-GLLIKNE 208
>gi|125716925|ref|YP_001034058.1| amino acid recemase [Streptococcus sanguinis SK36]
gi|125496842|gb|ABN43508.1| Amino acid recemase, putative [Streptococcus sanguinis SK36]
Length = 232
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 107/258 (41%), Gaps = 35/258 (13%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASVHSLKSK 140
TIG+IGG+S ST ++ + + N+ E L A +
Sbjct: 2 KTIGLIGGMSWESTTSY-----------------YQIINETIKKELGGLHSAKILLYSVD 44
Query: 141 TVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+++H + Q L LEQAGA IV+ + H + + +IP LH+
Sbjct: 45 FAEIEHYQAVGDWEKSGQLLADVAQRLEQAGADFIVICTNTMHKVAPQIQDKITIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ A+ L ++ ++G+L T T++ FY+EKL G EV++PD+A + V
Sbjct: 105 AQATAQALLTDGIQ--------KVGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEV 156
Query: 256 IIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDP 314
+ L D+ E ++ I L AVI+G E+ G+L K D
Sbjct: 157 NRIIYDELCLGDIKESSKQTYLAVIDDLKKAGAEAVILGCTEI-GLLVKQSDTDLPLYDT 215
Query: 315 MDALARSTVTWARSNKKL 332
A WA NK+L
Sbjct: 216 TVIHAEKAAEWA-VNKRL 232
>gi|449975304|ref|ZP_21815750.1| putative amino acid recemase [Streptococcus mutans 11VS1]
gi|449177167|gb|EMB79481.1| putative amino acid recemase [Streptococcus mutans 11VS1]
Length = 233
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 40/188 (21%)
Query: 79 LNQANTIGIIGGVSVSSTLNF-----------LGKLVWYSAKDAEECPPFVVCNDPALNE 127
+N TIG+IGG+S ST ++ LG L +SAK F
Sbjct: 1 MNTMKTIGLIGGMSWESTTSYYQLINETIKKELGGL--HSAKILLYSVDFA--------- 49
Query: 128 ELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEG 187
E+ H + +K+ + + ++Q L EQAGA IV+ + H + +
Sbjct: 50 EIEHYQANGDWAKSAE---VLSQIAQKL-------EQAGADFIVICTNTMHKVAPQIQKQ 99
Query: 188 CSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+IP LH+ + A+ + E ++ ++G+L T T++ FY+EKL G EV++P
Sbjct: 100 IAIPILHIAQATAEAILENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIP 151
Query: 248 DKATMEHV 255
D+A + V
Sbjct: 152 DQAGITEV 159
>gi|336315222|ref|ZP_08570133.1| aspartate racemase [Rheinheimera sp. A13L]
gi|335880199|gb|EGM78087.1| aspartate racemase [Rheinheimera sp. A13L]
Length = 239
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 113/265 (42%), Gaps = 55/265 (20%)
Query: 83 NTIGIIGGVSVSSTLNFL----------------GKLVWYSAKDAEECPPFVVCNDPALN 126
TIG+IGG+S ST+ + GK++ YS AE
Sbjct: 2 KTIGLIGGMSWESTIPYYRQINQCIKQQLGGLHSGKIILYSVDFAE-------------I 48
Query: 127 EELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSE 186
E+L ++ + D + L H L+ AGA CIV+ + H +
Sbjct: 49 EQL---------QRSGEWDK----AGEVLAHAALRLQAAGADCIVLCTNTMHKVAASIEA 95
Query: 187 GCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKL-QNQGFEVV 245
+IP LH+ + A+ +++A LK ++ +L T T+ FY+++L ++ G EV+
Sbjct: 96 AVTIPLLHIADATAEAIEQAGLK--------KVALLGTRFTMEQDFYKKRLTEHYGLEVL 147
Query: 246 LPDKATME--HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK 303
+PD+A H +I L E +R L + + L+V+ A+I+G E+ G+L
Sbjct: 148 VPDEAARAGVHQVIYQELCLGIVKPE-SRLLYQQIMADLVVQGAEAIILGCTEI-GLLVS 205
Query: 304 DDPLLKKCIDPMDALARSTVTWARS 328
+ D A+ WA S
Sbjct: 206 AEDCTVPLFDTTALHAQKAADWALS 230
>gi|262279604|ref|ZP_06057389.1| aspartate racemase [Acinetobacter calcoaceticus RUH2202]
gi|262259955|gb|EEY78688.1| aspartate racemase [Acinetobacter calcoaceticus RUH2202]
Length = 247
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 43/187 (22%)
Query: 84 TIGIIGGVSVSSTLNF-----------LGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST + LGKL +SAK V+ N E
Sbjct: 3 TIGLLGGMSWESTALYYQQINKMVHGKLGKL--HSAK--------VIINSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ +L++K + + Q L LE+AGA CI++ + H + + ++PF
Sbjct: 48 -IATLQAKGLWQEAGAYLAEQALN-----LEKAGAECILVCTNTMHKIAPQIEDAITVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DK 249
+H+ + AKE+ ++ ++ +L T T+ FY+ +LQ+ G +V++P D+
Sbjct: 102 IHIADATAKEIVSQDIR--------KVALLGTAFTMEQDFYKARLQDHGIDVIIPNEADR 153
Query: 250 ATMEHVI 256
+ H+I
Sbjct: 154 KIVHHII 160
>gi|450052209|ref|ZP_21841189.1| putative amino acid recemase [Streptococcus mutans NFSM1]
gi|449201057|gb|EMC02070.1| putative amino acid recemase [Streptococcus mutans NFSM1]
Length = 229
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 79/189 (41%), Gaps = 50/189 (26%)
Query: 83 NTIGIIGGVSVSSTLNFL----------------GKLVWYSAKDAEECPPFVVCNDPALN 126
TIG+IGG+S ST + K++ YS AE
Sbjct: 2 KTIGLIGGMSWESTTTYYQLINETIKKEFGGLHSAKILLYSVDFAEI------------- 48
Query: 127 EELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSE 186
E + AS KS V L LEQAGA IV+ + H + E
Sbjct: 49 -ERYQASGDWAKSAEV------------LSQIAQKLEQAGADFIVICTNTMHKVAPQIQE 95
Query: 187 GCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVL 246
++P LH+ + A+ + E ++ ++G+L T T++ FY+EKL G EV++
Sbjct: 96 KITVPILHIAQATAEAILENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLI 147
Query: 247 PDKATMEHV 255
PD+A + V
Sbjct: 148 PDQAGITEV 156
>gi|424849639|ref|ZP_18274083.1| putative racemase [Campylobacter jejuni subsp. jejuni D2600]
gi|356487277|gb|EHI17232.1| putative racemase [Campylobacter jejuni subsp. jejuni D2600]
Length = 231
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 34/172 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST+ + + + A+N++L + + +V
Sbjct: 3 TIGIIGGMSFESTITYYKTI------------------NQAINDKLKSLNSAKILLYSVN 44
Query: 144 LDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ I SQ+ + A LE AGA I++ + H ++ + +IP LH+
Sbjct: 45 FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ AK LK+ ++ +IG+L T T++ FY++ L + V++P
Sbjct: 105 AKSSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKVLIEENISVIIP 148
>gi|205356462|ref|ZP_03223226.1| putative amino-acid recemase [Campylobacter jejuni subsp. jejuni
CG8421]
gi|205345649|gb|EDZ32288.1| putative amino-acid recemase [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 193
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 34/172 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST+ + + + A+N++L + + +V
Sbjct: 3 TIGIIGGMSFESTITYYKTI------------------NQAINDKLKSLNSAKILLYSVN 44
Query: 144 LDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ I SQ+ + A LE AGA I++ + H ++ + +IP LH+
Sbjct: 45 FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ AK LK+ ++ +IG+L T T++ FY++ L + V++P
Sbjct: 105 AKSSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKVLIEENISVIIP 148
>gi|293609488|ref|ZP_06691790.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427425342|ref|ZP_18915438.1| aspartate racemase [Acinetobacter baumannii WC-136]
gi|292827940|gb|EFF86303.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425697833|gb|EKU67493.1| aspartate racemase [Acinetobacter baumannii WC-136]
Length = 229
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 43/227 (18%)
Query: 84 TIGIIGGVSVSSTLNF-----------LGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST + LGKL +SAK V+ N E
Sbjct: 3 TIGLLGGMSWESTALYYQQINKMVHRKLGKL--HSAK--------VIINSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ +L++K + + L + LE+AGA CI++ + H + + SIPF
Sbjct: 48 -IAALQAKGLWQE-----AGTYLAEQAQNLEKAGADCILVCTNTMHKIAAQIEDSISIPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA-- 250
LH+ + AKE+ + ++ +L T T+ FY+ +L++ G +VV+P++A
Sbjct: 102 LHIADATAKEILSQNIG--------KVALLGTAFTMEQDFYKARLRDYGIDVVIPNEADR 153
Query: 251 TMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
+ H II L + + + + I ++ L+ +I+G E+
Sbjct: 154 KIVHSIIYEELCLGVINPDSQQKYIAI-VERLIAEGAQGIILGCTEI 199
>gi|419627473|ref|ZP_14160375.1| aspartate racemase, partial [Campylobacter jejuni subsp. jejuni LMG
23263]
gi|419661039|ref|ZP_14191383.1| aspartate racemase, partial [Campylobacter jejuni subsp. jejuni
2008-979]
gi|380606652|gb|EIB26550.1| aspartate racemase, partial [Campylobacter jejuni subsp. jejuni LMG
23263]
gi|380633328|gb|EIB51296.1| aspartate racemase, partial [Campylobacter jejuni subsp. jejuni
2008-979]
Length = 229
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 34/172 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST+ + + + A+N++L + + +V
Sbjct: 3 TIGIIGGMSFESTITYYKTI------------------NQAINDKLKSLNSAKILLYSVN 44
Query: 144 LDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ I SQ+ + A LE AGA I++ + H ++ + +IP LH+
Sbjct: 45 FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ AK LK+ ++ +IG+L T T++ FY++ L + V++P
Sbjct: 105 AKSSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKVLIEENISVIIP 148
>gi|22125487|ref|NP_668910.1| resistance protein [Yersinia pestis KIM10+]
gi|21958382|gb|AAM85161.1|AE013762_3 putative resistance protein [Yersinia pestis KIM10+]
Length = 276
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 10/148 (6%)
Query: 152 SQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPL 211
+Q L + L+ AGA IV+ + H D+ C +P LH+ + A ++K+ +
Sbjct: 107 AQLLSNAAISLKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADATAVQIKQQGID-- 164
Query: 212 EAGSGVRIGVLATDATLSAGFYQEKL-QNQGFEVVLPDKATMEHVIIPTIEALNHRDM-E 269
+IG+L T T+ GFY+ +L + G EV+ PD E V E L + E
Sbjct: 165 ------KIGLLGTRYTMEQGFYRGRLTEKHGIEVITPDDTDREAVNRIIYEELCLGIISE 218
Query: 270 GARNLLRIGIQLLLVRAVNAVIIGSDEM 297
+R+ R I+ L + V +I G E+
Sbjct: 219 TSRDAYRRVIKKLEAQGVQGIIFGCTEI 246
>gi|406573470|ref|ZP_11049220.1| aspartate racemase [Janibacter hoylei PVAS-1]
gi|404557066|gb|EKA62518.1| aspartate racemase [Janibacter hoylei PVAS-1]
Length = 222
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 19/150 (12%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L GA I++ + HA +S IPF H+ E A+ + A + R+G+
Sbjct: 62 LRAGGAEGILLAANTMHAVADRISADLDIPFFHIAEATAERVAGAHQR--------RVGL 113
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDM------EGARNLL 275
LAT T+ FY + +G +VVLPD A P ++ + + ++ + +R L
Sbjct: 114 LATATTMGGDFYTTPFERRGIDVVLPDPADR-----PEVDRMIYEELVPGIIKDSSRKEL 168
Query: 276 RIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
R +Q + R V++ E+ +L +DD
Sbjct: 169 RRIMQGMADRGAEGVVLAGTELGLLLEEDD 198
>gi|450115581|ref|ZP_21864009.1| putative amino acid recemase [Streptococcus mutans ST1]
gi|449227865|gb|EMC27263.1| putative amino acid recemase [Streptococcus mutans ST1]
Length = 233
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 38/187 (20%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLK 138
+N TIG+IGG+S ST ++ + + N+ + +EL +HS K
Sbjct: 1 MNTMKTIGLIGGMSWESTTSY-----------------YQLINET-IKKEL--GGLHSAK 40
Query: 139 -----SKTVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGC 188
+++H + + ++ L LE+AGA IV+ + H + +
Sbjct: 41 ILLYSVDFAEIEHYQASGDWAKSAEVLSQIAQKLEKAGADFIVICTNTMHKVAPQIQKQI 100
Query: 189 SIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
+IP LH+ + A+ L E ++ ++G+L T T++ FY+EKL G EV++PD
Sbjct: 101 AIPILHIAQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPD 152
Query: 249 KATMEHV 255
+A + V
Sbjct: 153 QAGITEV 159
>gi|421676137|ref|ZP_16116049.1| aspartate racemase [Acinetobacter baumannii OIFC065]
gi|421691586|ref|ZP_16131245.1| aspartate racemase [Acinetobacter baumannii IS-116]
gi|404562195|gb|EKA67419.1| aspartate racemase [Acinetobacter baumannii IS-116]
gi|410380433|gb|EKP33019.1| aspartate racemase [Acinetobacter baumannii OIFC065]
Length = 242
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 40/178 (22%)
Query: 84 TIGIIGGVSVSSTL-----------NFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST N LGKL +SAK ++ N E
Sbjct: 3 TIGLLGGMSWESTALYYQQINRTVQNKLGKL--HSAK--------IILNSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ +L++K + + GA L + LE+AGA CI++ + H + + ++PF
Sbjct: 48 -IAALQAKGLWQE--AGAY---LAEQAQNLEKAGADCILVCTNTMHKVAPQIEDAITVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
+H+ + AKE+ ++ ++ +L T T+ FY+ +LQ+ G EV++P+ A
Sbjct: 102 IHIADATAKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDLGIEVIIPNDA 151
>gi|373116604|ref|ZP_09530756.1| aspartate racemase [Lachnospiraceae bacterium 7_1_58FAA]
gi|371669171|gb|EHO34274.1| aspartate racemase [Lachnospiraceae bacterium 7_1_58FAA]
Length = 234
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 105/241 (43%), Gaps = 22/241 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GI+GG+ +T +F +++ + A +E P ++ +D ++ + ++ +
Sbjct: 6 LGILGGMGPQATQDFYQRILDRTDASCDQEHLPTLIWSDTSMPD----------RTAAIL 55
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
G + L R LE+ G + +PC+ SH + + +IP +H +
Sbjct: 56 GGDAEGCYRRLLDGAR-LLERGGCTALAIPCNTSHYFADRLQGDIAIPLIH--------M 106
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ L A R+G+LATD T+ G YQ + +G E V P A ++ +++ I
Sbjct: 107 PRETVAVLAADGKKRVGILATDGTVQTGIYQRECAARGIEAVAP-PADVQKLVMSIIYDE 165
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTV 323
R +G+R + L +A I+G E+ V L +D M+ LA +
Sbjct: 166 IKRGEKGSREKFAAIDRWLRASGCDAAILGCTELS-VYRTYHGLPDYYLDAMEILAERCI 224
Query: 324 T 324
T
Sbjct: 225 T 225
>gi|365850875|ref|ZP_09391329.1| aspartate racemase [Lactobacillus parafarraginis F0439]
gi|363718124|gb|EHM01479.1| aspartate racemase [Lactobacillus parafarraginis F0439]
Length = 239
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 105/250 (42%), Gaps = 18/250 (7%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
N IIGG+ +T F+ L + AK ++ +++ N + + + HS
Sbjct: 3 NFFTIIGGMGTEATEVFIHILNERTPAKRDQDYLDYILVNHATVPDRTDYILDHSKPDPF 62
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+ L + Q R F V+PC+ +H D+ IP LH+ K
Sbjct: 63 IPL---AADIKQQSRLHPDFF--------VIPCNTAHYRFDDLQSMTDIPILHMPRETVK 111
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
++ P + R+G++AT TL G Y ++++N G+E+V PD+ T + + +
Sbjct: 112 DI------PNYVPNAKRVGLIATKGTLHDGIYDQEIKNAGYELVKPDEKTADQTMELIYD 165
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARS 321
+ ++ A +I ++ + + V++G E+ + ID LA
Sbjct: 166 DIKEKNQVDAGLYHQILSTMVNDFSCDIVVLGCTELSVAQQQAGDHPYPVIDSQTVLANR 225
Query: 322 TVTWARSNKK 331
T+ A N++
Sbjct: 226 TIELALKNRR 235
>gi|450047018|ref|ZP_21839266.1| putative amino acid recemase [Streptococcus mutans N34]
gi|450177018|ref|ZP_21886175.1| putative amino acid recemase [Streptococcus mutans SM1]
gi|449198017|gb|EMB99149.1| putative amino acid recemase [Streptococcus mutans N34]
gi|449244308|gb|EMC42689.1| putative amino acid recemase [Streptococcus mutans SM1]
Length = 229
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 50/189 (26%)
Query: 83 NTIGIIGGVSVSSTLNF-----------LG-----KLVWYSAKDAEECPPFVVCNDPALN 126
TIG+IGG+S ST ++ LG K++ YS D E + D A +
Sbjct: 2 KTIGLIGGMSWESTTSYYQLINETIKKELGGLHSAKILLYSV-DFAEIEHYQASGDWAKS 60
Query: 127 EELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSE 186
E+ ++Q L EQAGA IV+ + H + +
Sbjct: 61 AEVL------------------SQIAQKL-------EQAGADFIVICTNTMHKVAPQIQK 95
Query: 187 GCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVL 246
+IP LH+ + A+ L E ++ ++G+L T T++ FY+EKL G EV++
Sbjct: 96 QTAIPILHIAQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLI 147
Query: 247 PDKATMEHV 255
PD+A + V
Sbjct: 148 PDQAGITEV 156
>gi|350267675|ref|YP_004878982.1| amino acid racemase [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|349600562|gb|AEP88350.1| putative amino acid racemase [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 227
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 51/255 (20%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
IGI+ G+ ST F+ K++ Y A + + P ++ + P F+A
Sbjct: 2 IGILAGMGPKSTSPFIDKVIDYCQKLYGASNDADYPHMMIYSCPTP----FYADR----- 52
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+DH G + + + LE+ G I +PC+ +H ++ ++ + S+P LH+ E
Sbjct: 53 ---PIDH--GEMKRAIIDGAVKLEKTGVDFIALPCNTAHVYYEEIQQALSVPLLHIIEET 107
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME-HVIIP 258
KE+ P A V VL TD+T+ + YQ+ L+ G E V D + +I
Sbjct: 108 IKEI------PHPAKKAV---VLGTDSTIQSVIYQKGLKANGQEAVHKDHWQQAVNQLIA 158
Query: 259 TIEALNHRDMEGARNLLRIGIQLLLVRA---------VNAVIIGSDEMQGVLPKDDPLLK 309
I+ NH M+ + L + + + A +NAV+ D +Q +P
Sbjct: 159 AIKQPNH--MQHTQALWQTLYEEISQHADIIISACTDLNAVL---DHIQSEIP------- 206
Query: 310 KCIDPMDALARSTVT 324
ID D LA+STV+
Sbjct: 207 -IIDSSDCLAKSTVS 220
>gi|149185927|ref|ZP_01864242.1| Aspartate racemase [Erythrobacter sp. SD-21]
gi|148830488|gb|EDL48924.1| Aspartate racemase [Erythrobacter sp. SD-21]
Length = 222
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 123 PALNEELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHG 182
P L E L ++ + + K + D I + ++ R LE AGA+ IV+ + H +
Sbjct: 28 PMLIESLDYSRIAAAKGQD-DWDGIASILVESARR----LEAAGAQGIVIAANTMHKVYD 82
Query: 183 DVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGF 242
V+EG SIP LH+ + V + EAK + +L T ++ FY+++L + G
Sbjct: 83 RVAEGISIPVLHIADAVGVAMAEAKCE--------NAALLGTRFVMTESFYRQRLVSHGV 134
Query: 243 EVVLPDKATMEHVI-IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL 301
+++ PD +E V I E + R A L+ I + +A+++ E++ V+
Sbjct: 135 DLLPPDPNDVELVDGIIYKELMLGRVTRDAERALKTVITMKDKEGADAIVLACTELELVV 194
Query: 302 PKDDPLLKKCIDPMDALARSTVTW 325
D +L D D R+ W
Sbjct: 195 DTDANVL-PVFDSTDIHCRAATDW 217
>gi|121612261|ref|YP_999809.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
81-176]
gi|167004784|ref|ZP_02270542.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
81-176]
gi|419617564|ref|ZP_14151136.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 129-258]
gi|87249036|gb|EAQ71998.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
81-176]
gi|380597090|gb|EIB17758.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 129-258]
Length = 231
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 34/172 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST+ + + + A+N++L + + +V
Sbjct: 3 TIGIIGGMSFESTITYYKTI------------------NQAINDKLKSLNSAKILLYSVN 44
Query: 144 LDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ I SQ+ + A LE AGA I++ + H ++ + +IP LH+
Sbjct: 45 FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFNEIQQNINIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ AK LK+ ++ +IG+L T T++ FY++ L + V+ P
Sbjct: 105 AKSSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKMLIEENISVITP 148
>gi|404317425|ref|ZP_10965358.1| aspartate racemase [Ochrobactrum anthropi CTS-325]
Length = 231
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 31/251 (12%)
Query: 83 NTIGIIGGVSVSSTLNF---LGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
TIG+IGG+S S+ + + + + + D E+L H +
Sbjct: 3 KTIGLIGGMSWESSQEYYRIINQEIRARLGGTHSAKSLMWSMDFGEIEQLQH------QG 56
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
K +L + +QNL E+ GA I++ + H DV SIP H+ +
Sbjct: 57 KWDELTRLMIEAAQNL-------EKGGADFILICTNTMHKMAADVENATSIPLAHIADPT 109
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKL-QNQGFEVVLPDKA---TMEHV 255
A+++K A L ++G+L T T+ FY+ +L G EV+ PD A T+ +
Sbjct: 110 AEKIKAAGLS--------KVGLLGTAFTMEQEFYKGRLAAKHGLEVLTPDDADRKTVHDI 161
Query: 256 IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPM 315
I + RD +R R I L+ R A+I+G E+ ++ + D + D
Sbjct: 162 IYHELVVGEVRD--ASREKYRAVISRLVERGAEAIILGCTEIMLLIGQQDSPV-PVFDTT 218
Query: 316 DALARSTVTWA 326
A + V WA
Sbjct: 219 RLHAEAAVDWA 229
>gi|399044511|ref|ZP_10738114.1| aspartate racemase [Rhizobium sp. CF122]
gi|398056931|gb|EJL48911.1| aspartate racemase [Rhizobium sp. CF122]
Length = 239
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 121/262 (46%), Gaps = 42/262 (16%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ V+Y + N+ + E L + L +V
Sbjct: 2 QTIGLIGGMSFESSA------VYYR-----------LINE-MVRERLGGLASADLLMHSV 43
Query: 143 QLDHIRG--------AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH 194
D I A + L L+ AGARC+++ + H V+ S+P +H
Sbjct: 44 NFDEIVAMQRAGDWDAAANRLGDVALHLQIAGARCMLICTNTMHLIADQVASRISVPLIH 103
Query: 195 VGECVAKELKEA-KLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA--T 251
+ + AK LK A + +PL +LAT T+ GFY +++++ G +VV+P+ A T
Sbjct: 104 IIDETAKSLKAAGRKRPL---------LLATRYTMEHGFYADRMKSLGVDVVVPEAADRT 154
Query: 252 MEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL-PKDDPLLKK 310
H II E + ++ +R+ L I+ + +++I+G E+ +L PK PL
Sbjct: 155 SVHDIIFN-ELCAGKVLDSSRDKLMQIIERERAKGADSIILGCTEICLILDPKHLPL--P 211
Query: 311 CIDPMDALARSTVTWARSNKKL 332
D + AR+ V +A ++ +
Sbjct: 212 GFDTTEIHARAAVEFALGDEAV 233
>gi|294504656|ref|YP_003568718.1| resistance protein [Yersinia pestis Z176003]
gi|384123121|ref|YP_005505741.1| resistance protein [Yersinia pestis D106004]
gi|384126980|ref|YP_005509594.1| resistance protein [Yersinia pestis D182038]
gi|262362717|gb|ACY59438.1| resistance protein [Yersinia pestis D106004]
gi|262366644|gb|ACY63201.1| resistance protein [Yersinia pestis D182038]
gi|294355115|gb|ADE65456.1| resistance protein [Yersinia pestis Z176003]
Length = 263
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 10/148 (6%)
Query: 152 SQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPL 211
+Q L + L+ AGA IV+ + H D+ C +P LH+ + A ++K+ +
Sbjct: 94 AQLLSNAAISLKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADATAVQIKQQGID-- 151
Query: 212 EAGSGVRIGVLATDATLSAGFYQEKL-QNQGFEVVLPDKATMEHVIIPTIEALNHRDM-E 269
+IG+L T T+ GFY+ +L + G EV+ PD E V E L + E
Sbjct: 152 ------KIGLLGTRYTMEQGFYRGRLTEKHGIEVITPDDTDREAVNRIIYEELCLGIISE 205
Query: 270 GARNLLRIGIQLLLVRAVNAVIIGSDEM 297
+R+ R I+ L + V +I G E+
Sbjct: 206 TSRDAYRRVIKKLEAQGVQGIIFGCTEI 233
>gi|392958948|ref|ZP_10324445.1| aspartate racemase [Bacillus macauensis ZFHKF-1]
gi|391875093|gb|EIT83716.1| aspartate racemase [Bacillus macauensis ZFHKF-1]
Length = 231
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 24/235 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG++GG+S ST ++Y + E + A + +SV + +
Sbjct: 2 KTIGMLGGMSWESTA------IYYKVMN-ERVKQRLGGLHSA---KCLLSSVDFEEMAQL 51
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
Q D + L + A LEQAGA +++ + H+ + S+PFLH+ E A
Sbjct: 52 QADGDWQGAGELLGKQAAALEQAGADFLIICTNTMHSVIPTIKRFVSLPFLHIAEATATR 111
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME--HVIIPTI 260
+++A L ++G+L T T+ FY K++ G EV++P + + H II
Sbjct: 112 IQQASLS--------KVGLLGTRYTMEQDFYSAKIEEAGIEVMIPSEQERQDVHRIIYEE 163
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD---PLLKKCI 312
L H+ ++ +R + I+ L R +I+G E+ ++ + D PL +
Sbjct: 164 LCLGHQ-VDSSRARYQEIIRSLQARGAEGIILGCTEIGLLISESDVELPLFDTAV 217
>gi|345022591|ref|ZP_08786204.1| aspartate racemase [Ornithinibacillus scapharcae TW25]
Length = 247
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 110/250 (44%), Gaps = 23/250 (9%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVCNDPALNEELFHASVHS 136
+NQ +G++GG+ ++T F +++ + KD + + L HA++
Sbjct: 1 MNQKK-LGVLGGMGPAATSLFFDRVIENTVAGKDQDHIDMVI----------LNHATIPD 49
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
+++ + D+ + + ++ E AG I +PC+ SH + ++ +I +++
Sbjct: 50 -RTRAILEDN-KEPFLEAVKKDFELFEVAGVDNIAIPCNTSHYYFDEMQAMTNIKIINMI 107
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
E A ++ G ++G+LATD T++ G YQ++L + +PD + V
Sbjct: 108 EETANYIRS------NYGPDAKVGILATDGTINTGIYQDELHKYNMKAHIPDVHGQKQV- 160
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
+ TI RI +L + VI+G E+ + + LL C+D M
Sbjct: 161 MQTIYDFKADKPINIPEFERIIQNMLATEDCDCVILGCTELSCIEIGAN-LLPYCVDAMQ 219
Query: 317 ALARSTVTWA 326
L +T++
Sbjct: 220 VLVNRAITYS 229
>gi|384177067|ref|YP_005558452.1| putative amino acid racemase [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|349596291|gb|AEP92478.1| putative amino acid racemase [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
Length = 227
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 114/257 (44%), Gaps = 55/257 (21%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ K++ Y A + + P ++ C P F+A
Sbjct: 2 IGILAGMGPKSTSPFIDKVIDYCQKLYGASNDIDYPHMMIYSCQTP------FYAD---- 51
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
+ + D ++ A+ + A LE+ G I +PC+ +H ++ ++ + ++P LH+ E
Sbjct: 52 --RPIDHDEMKKAIIDGV----ARLEKTGVDFIALPCNTAHVYYEEIQQALTVPMLHIVE 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME-HVI 256
KE+ P A V VL T+ T+ + YQ+ L+ G EVV D + +
Sbjct: 106 ETIKEI------PHPAKKAV---VLGTEPTIQSAIYQKVLKANGKEVVHKDHWQQAVNQL 156
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRA---------VNAVIIGSDEMQGVLPKDDPL 307
I I+ NH ME + L + + + A +NAV+ D +Q +P
Sbjct: 157 IAAIKQPNH--MEHTQALWQTLYEEISQHADIIISACTDLNAVL---DHIQSEIP----- 206
Query: 308 LKKCIDPMDALARSTVT 324
ID LA+STV+
Sbjct: 207 ---IIDSSACLAKSTVS 220
>gi|153864530|ref|ZP_01997405.1| aspartate racemase [Beggiatoa sp. SS]
gi|152145974|gb|EDN72594.1| aspartate racemase [Beggiatoa sp. SS]
Length = 216
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIG 220
FLE AG IV+PC+ +HA+H V IP++H+ +C + L + ++G
Sbjct: 80 FLESAGVDFIVVPCNTAHAFHEQVQSQLQIPWIHLIDCTTQFLVD------NYQDTKKVG 133
Query: 221 VLATDATLSAGFYQEKLQNQGF 242
+LATD TL + Y L N GF
Sbjct: 134 ILATDGTLQSQLYHNSLLNAGF 155
>gi|147828322|emb|CAN62184.1| hypothetical protein VITISV_014122 [Vitis vinifera]
Length = 236
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 33/37 (89%)
Query: 297 MQGVLPKDDPLLKKCIDPMDALARSTVTWARSNKKLT 333
M+ +LP+DDPLL+KCID MDALARST+ WARS +++T
Sbjct: 1 MRDLLPRDDPLLRKCIDLMDALARSTINWARSVEQVT 37
>gi|421667667|ref|ZP_16107729.1| aspartate racemase [Acinetobacter baumannii OIFC087]
gi|410383613|gb|EKP36141.1| aspartate racemase [Acinetobacter baumannii OIFC087]
Length = 233
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+AGA CI++ + H + + ++PF+H+ + AKE+ ++ ++ +
Sbjct: 62 LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADATAKEILSQNIR--------KVAL 113
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKA 250
L T TL FY+ +LQ+ G EV++P+ A
Sbjct: 114 LGTAFTLEQDFYKARLQDHGIEVIIPNDA 142
>gi|172061098|ref|YP_001808750.1| aspartate racemase [Burkholderia ambifaria MC40-6]
gi|171993615|gb|ACB64534.1| aspartate racemase [Burkholderia ambifaria MC40-6]
Length = 230
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 43/257 (16%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + + +S + H H+ KS V
Sbjct: 2 KTIGLIGGMSWESSAEYYRMINRHS--------------------KALHGGHHNAKSVLV 41
Query: 143 QLDHIR----------GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+D A+ + + LE AGA +V+ + H + + ++PF
Sbjct: 42 TVDFAEIEALQRAQDWVALGERMADAARQLEAAGADLVVLTTNTMHRVYDAIEAAVALPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKAT 251
LH+ + L+ A ++ R+ +L T T+ FY E+L+++ G +V++PD+A
Sbjct: 102 LHIADPTGAALRAAGVE--------RVALLGTRYTMELPFYAERLRDKFGLDVLVPDEAA 153
Query: 252 MEHVIIPTIEALNHRDMEGARNLLRIG-IQLLLVRAVNAVIIGSDEMQGVL-PKDDPLLK 309
V + L H ++ A + I L R AVI+G E+ ++ D PL
Sbjct: 154 RGDVHRIIYDELCHGVIDAASRATYVAIIDELAKRGAQAVILGCTEITLLIGAADSPL-- 211
Query: 310 KCIDPMDALARSTVTWA 326
D A++ V WA
Sbjct: 212 PVFDTTALHAKAAVEWA 228
>gi|444377761|ref|ZP_21176969.1| Aspartate racemase [Enterovibrio sp. AK16]
gi|443678132|gb|ELT84805.1| Aspartate racemase [Enterovibrio sp. AK16]
Length = 236
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S ST + L Y+ + + ++ +SV + +
Sbjct: 2 KTIGLIGGMSWESTATYYRLLNQYTRE----------ALGGHHSAKILMSSVDFAEIEAQ 51
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
Q ++ L + LE AGA +++ + H +V + SIP LH+ + A++
Sbjct: 52 QRADAWDESAKQLAGEARKLEAAGADFMLIGTNTMHKVASEVQDAISIPLLHIADATAQK 111
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD--KATMEHVIIPTI 260
LKE +K +G+L T T+S FY+E+L + G +V +P+ + H II
Sbjct: 112 LKEDDIK--------HVGLLGTRFTMSQPFYKERLTSHGIQVTVPEGWHQDIVHEIIYQE 163
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
+ + L + I L R V +I+G E+
Sbjct: 164 LVQGEVNTHSRKQYLSV-IDALKARGVEGIILGCTEI 199
>gi|290890562|ref|ZP_06553637.1| hypothetical protein AWRIB429_1027 [Oenococcus oeni AWRIB429]
gi|419758779|ref|ZP_14285091.1| aspartate racemase [Oenococcus oeni AWRIB304]
gi|421195282|ref|ZP_15652491.1| aspartate racemase [Oenococcus oeni AWRIB568]
gi|421197395|ref|ZP_15654570.1| aspartate racemase [Oenococcus oeni AWRIB576]
gi|290479958|gb|EFD88607.1| hypothetical protein AWRIB429_1027 [Oenococcus oeni AWRIB429]
gi|399904234|gb|EJN91690.1| aspartate racemase [Oenococcus oeni AWRIB304]
gi|399975004|gb|EJO09072.1| aspartate racemase [Oenococcus oeni AWRIB576]
gi|399975988|gb|EJO10017.1| aspartate racemase [Oenococcus oeni AWRIB568]
Length = 233
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 107/244 (43%), Gaps = 16/244 (6%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
GI+GG+ +T NF+ L + +++ LN +F+ + ++ +
Sbjct: 5 FGILGGMGTMATENFVRTLDRLTETHSDQ---------NFLNYLVFNHACIPDRTAYI-F 54
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
D + L+ L A +V+ C+ +H + +++ +P L++ + K
Sbjct: 55 DRTKDNPLPFLKEDIQQLNSLSADFVVITCNTAHYFLPELTAIAKMPILNMPSLAVQACK 114
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALN 264
+ ++I +LATD T+++G YQEK+ Q + ++PDK V+ + +
Sbjct: 115 K------RTAGTLKISILATDGTIASGLYQEKISAQSDQAIIPDKELQIQVMKFIYQDIK 168
Query: 265 HRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVT 324
+ A + +LL+ + + VI+G E ++ + + ID LA + V+
Sbjct: 169 QNNRIEADKYHHLVEKLLIKQKCDYVILGCTEFSVAQEREPYISDRVIDAQQVLANTAVS 228
Query: 325 WARS 328
A++
Sbjct: 229 MAKN 232
>gi|116513165|ref|YP_812072.1| aspartate racemase [Lactococcus lactis subsp. cremoris SK11]
gi|125625258|ref|YP_001033741.1| RacD protein [Lactococcus lactis subsp. cremoris MG1363]
gi|385839561|ref|YP_005877191.1| Aspartate racemase [Lactococcus lactis subsp. cremoris A76]
gi|389855646|ref|YP_006357890.1| aspartate racemase [Lactococcus lactis subsp. cremoris NZ9000]
gi|414075222|ref|YP_007000439.1| Aspartate racemase [Lactococcus lactis subsp. cremoris UC509.9]
gi|116108819|gb|ABJ73959.1| Aspartate racemase [Lactococcus lactis subsp. cremoris SK11]
gi|124494066|emb|CAL99067.1| RacD protein [Lactococcus lactis subsp. cremoris MG1363]
gi|300072068|gb|ADJ61468.1| aspartate racemase [Lactococcus lactis subsp. cremoris NZ9000]
gi|358750789|gb|AEU41768.1| Aspartate racemase [Lactococcus lactis subsp. cremoris A76]
gi|413975142|gb|AFW92606.1| Aspartate racemase [Lactococcus lactis subsp. cremoris UC509.9]
Length = 240
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 19/115 (16%)
Query: 164 QAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG----ECVAKELKEAKLKPLEAGSGVRI 219
Q + V+PC+ +H + ++ + IP LH+ + + + +AK R+
Sbjct: 74 QLSPKFFVVPCNTAHYYFDEMQKATEIPILHMPRIAVDSIGRHFSDAK----------RV 123
Query: 220 GVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNL 274
VLAT+ T+ G Y+E L+ QG+E V+PD+ E V L +++++ RNL
Sbjct: 124 AVLATEGTILTGVYREALEEQGYEAVIPDEELQEKV-----NRLIYQEVKENRNL 173
>gi|257126498|ref|YP_003164612.1| aspartate racemase [Leptotrichia buccalis C-1013-b]
gi|257050437|gb|ACV39621.1| aspartate racemase [Leptotrichia buccalis C-1013-b]
Length = 231
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 30/176 (17%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKD------AEECPPFVVCNDPALNEELFHASVHSL 137
TIG+IGG+S ST+ + K++ + K+ + +C + V D EE A+ +
Sbjct: 5 TIGLIGGMSWESTVTYY-KIINETIKEKLGGLHSAKCILYSV--DFQEIEEC-QANGNWE 60
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
KS I G + N LE+AGA IV+ + H + E SIP LH+ E
Sbjct: 61 KS-----GEILGEAANN-------LEKAGADFIVICTNTMHKVVNQIKEKISIPILHIAE 108
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
A+++ E LK I +L T T+ FY+ KL +G V++PDK +E
Sbjct: 109 MTAEKILEKGLK--------NIALLGTKYTMEQDFYKSKLIEKGINVIIPDKNDIE 156
>gi|376295836|ref|YP_005167066.1| aspartate racemase [Desulfovibrio desulfuricans ND132]
gi|323458397|gb|EGB14262.1| aspartate racemase [Desulfovibrio desulfuricans ND132]
Length = 229
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 108/247 (43%), Gaps = 50/247 (20%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLK--SK 140
TIG+IGG+S S+L + + V N A+ EL +HS +
Sbjct: 2 KTIGLIGGMSWESSLEY-----------------YRVMN-QAVKAEL--GGLHSARILMN 41
Query: 141 TVQLDHIR--------GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+V +R V L LE AGA +V+ + H V+E S+P
Sbjct: 42 SVDFAPLRELMCAGDWAGVGNRLADAARTLESAGAELMVIGTNTMHKVADRVAEAVSVPL 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DK 249
+H+ +A + AG R+ +L T T+ FY +LQ+ GFEV++P D+
Sbjct: 102 VHI--------ADATAEAARAGGYARVALLGTIFTMEDDFYVGRLQDHGFEVLVPEAGDR 153
Query: 250 ATMEHVIIPTIEALNHRDMEGAR-NLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK----D 304
++ VI E ++G+R LRI I+ L R AVI+G E+ G+L + D
Sbjct: 154 KLVDRVIFD--ELCRGEFLDGSRAEFLRI-IEELAARGAEAVILGCTEI-GLLVRPGDTD 209
Query: 305 DPLLKKC 311
P L C
Sbjct: 210 VPTLDTC 216
>gi|424744275|ref|ZP_18172573.1| aspartate racemase [Acinetobacter baumannii WC-141]
gi|422943014|gb|EKU38045.1| aspartate racemase [Acinetobacter baumannii WC-141]
Length = 247
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 103/227 (45%), Gaps = 43/227 (18%)
Query: 84 TIGIIGGVSVSSTLNF-----------LGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST + LGKL +SAK V+ N E
Sbjct: 3 TIGLLGGMSWESTALYYQQINKMIHSKLGKL--HSAK--------VIINSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ +L++K + + L + LE+AGA CI++ + H + + + PF
Sbjct: 48 -IAALQAKGLWKE-----AGTYLAEQAQNLEKAGADCILVCTNTMHKVAAQIEDSITTPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
LH+ + AKE+ + ++ +L T T+ FY+ +LQ+ G +V++P++A
Sbjct: 102 LHIADATAKEIVSQNIG--------KVALLGTAFTMEQDFYKARLQDHGIDVIIPNEADR 153
Query: 253 E--HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
+ H II L + E + + I ++ L+ +I+G E+
Sbjct: 154 KIVHRIIYEELCLGVINPESQQKYIAI-VERLIAEGAQGIILGCTEI 199
>gi|163756473|ref|ZP_02163586.1| aspartate racemase [Kordia algicida OT-1]
gi|161323581|gb|EDP94917.1| aspartate racemase [Kordia algicida OT-1]
Length = 229
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 27/227 (11%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALN----EELFHASVHSLKS 139
TIG+IGG++ ST+ + L +AK E P C +++ ++L H L
Sbjct: 3 TIGLIGGITSQSTILYYQILNNLAAKHKGE-PHAAKCIINSVDFGEIQKLQHDGRWDL-- 59
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
LD I +++L E+AGA CI++ + H V + SIP +H+ E
Sbjct: 60 ----LDDIMAETAKSL-------EKAGAECILICANTMHLTIDAVRKSVSIPVIHIAEAT 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
A+++ E KL I +L T T+ FY+ L + G + ++P++A E V
Sbjct: 109 AEKILEKKLNT--------IALLGTKYTMEKDFYKAVLASFGIKTLIPNEAEREEVHRVI 160
Query: 260 IEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
E L+ + E +R I+ L VI+G E+ ++ ++D
Sbjct: 161 YEELSKGMLKESSREAYVNIIERLQKEGAEGVILGCTEIPLLIQQED 207
>gi|91784270|ref|YP_559476.1| aspartate racemase [Burkholderia xenovorans LB400]
gi|91688224|gb|ABE31424.1| Aspartate racemase [Burkholderia xenovorans LB400]
Length = 232
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 11/167 (6%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ GA +++ + H + + +PFLH+ + L+ A ++ R+G+
Sbjct: 71 LERGGADLVMLATNTMHRVYESIEAAIDVPFLHIADPTGNALRAAGVE--------RVGL 122
Query: 222 LATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPTIEALNHRDMEGA-RNLLRIGI 279
L T T+ FY +L+ + G ++PD+A V + L H + GA R + + I
Sbjct: 123 LGTRYTMEQTFYTGRLRERYGLTTLVPDEAERADVHRIIYDELCHGKVNGASRAVYQRVI 182
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWA 326
+ L R AVI+G E+ ++ +D L D A++ V WA
Sbjct: 183 EALAARGAQAVILGCTEITLLIKPEDSAL-PVFDTTALHAQAAVEWA 228
>gi|419693776|ref|ZP_14221758.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 9872]
gi|380672071|gb|EIB87253.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 9872]
Length = 230
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 34/172 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST+ + + + A+N++L + + +V
Sbjct: 3 TIGIIGGMSFESTITYYKTI------------------NQAINDKLKSLNSAKILLYSVN 44
Query: 144 LDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ I SQ+ + A LE AGA I++ + H ++ + +IP LH+
Sbjct: 45 FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ AK LK+ ++ +IG+L T T++ FY++ L + V+ P
Sbjct: 105 AKSSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKMLIEENISVITP 148
>gi|167586722|ref|ZP_02379110.1| aspartate racemase [Burkholderia ubonensis Bu]
Length = 230
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 109/246 (44%), Gaps = 21/246 (8%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + L YS + N + +V + + +
Sbjct: 2 KTIGLIGGMSWESSAEYYRMLNRYSK----------ALHGGHRNAKSVMVTVDFAEIEAL 51
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
Q H A+ ++ LE AGA IV+ + H H + ++PFLH+ + K
Sbjct: 52 QRVHDWPALGAHMAAAARQLEAAGADLIVLTTNTMHRVHDSIEAAVALPFLHIADPTGKA 111
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPTIE 261
L A L R+G+L T T+ FY E+L+ + G +V++PD+ + V +
Sbjct: 112 LLSAGLS--------RVGLLGTRYTMELPFYAERLREKFGLDVLVPDERERDDVHRIIYD 163
Query: 262 ALNHRDME-GARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALAR 320
L H ++ G+R I+ L R AVI+G E+ ++ +D L D A+
Sbjct: 164 ELCHGVVDAGSRATYARIIEGLAKRGAQAVILGCTEITLLIGAEDSPL-PVFDTTALHAQ 222
Query: 321 STVTWA 326
+ V WA
Sbjct: 223 AAVEWA 228
>gi|449883682|ref|ZP_21785322.1| putative amino acid recemase [Streptococcus mutans SA38]
gi|449925928|ref|ZP_21800500.1| putative amino acid recemase [Streptococcus mutans 4SM1]
gi|449931493|ref|ZP_21802406.1| putative amino acid recemase [Streptococcus mutans 3SN1]
gi|450066075|ref|ZP_21845772.1| putative amino acid recemase [Streptococcus mutans NLML9]
gi|450092846|ref|ZP_21856287.1| putative amino acid recemase [Streptococcus mutans W6]
gi|450111924|ref|ZP_21862920.1| putative amino acid recemase [Streptococcus mutans SM6]
gi|450148094|ref|ZP_21875451.1| putative amino acid recemase [Streptococcus mutans 14D]
gi|450164062|ref|ZP_21881099.1| putative amino acid recemase [Streptococcus mutans B]
gi|449161065|gb|EMB64282.1| putative amino acid recemase [Streptococcus mutans 4SM1]
gi|449162590|gb|EMB65720.1| putative amino acid recemase [Streptococcus mutans 3SN1]
gi|449209233|gb|EMC09765.1| putative amino acid recemase [Streptococcus mutans NLML9]
gi|449217848|gb|EMC17879.1| putative amino acid recemase [Streptococcus mutans W6]
gi|449223128|gb|EMC22832.1| putative amino acid recemase [Streptococcus mutans SM6]
gi|449236336|gb|EMC35259.1| putative amino acid recemase [Streptococcus mutans 14D]
gi|449242306|gb|EMC40899.1| putative amino acid recemase [Streptococcus mutans B]
gi|449249554|gb|EMC47667.1| putative amino acid recemase [Streptococcus mutans SA38]
Length = 230
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 24/175 (13%)
Query: 84 TIGIIGGVSVSST---LNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
TIG+IGG+S ST F+ + + + D A E + AS KS
Sbjct: 3 TIGLIGGMSWESTTSYYQFINETIKKELGGLHSAKILLYSVDFAEIEH-YQASGDWAKSA 61
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
V L LEQAGA IV+ + H + + +IP LH+ + A
Sbjct: 62 EV------------LSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPILHIAQATA 109
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ L E ++ ++G+L T T++ FY+EKL G EV++PD+A + V
Sbjct: 110 EALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQAGITEV 156
>gi|424762837|ref|ZP_18190321.1| aspartate racemase [Enterococcus faecium TX1337RF]
gi|431762104|ref|ZP_19550666.1| aspartate racemase [Enterococcus faecium E3548]
gi|402423755|gb|EJV55958.1| aspartate racemase [Enterococcus faecium TX1337RF]
gi|430624796|gb|ELB61446.1| aspartate racemase [Enterococcus faecium E3548]
Length = 243
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 170 IVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLS 229
IV+ C+ +H + ++ IP LH+ A EL + + ++ +L T+ ++
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL-------VRQHTTGKVAILGTEGSMK 132
Query: 230 AGFYQEKLQNQGFEVVLPDKATME---HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRA 286
AG Y+ +++N GFE V+PD A E ++I I+ +H + E +L ++ L
Sbjct: 133 AGIYEREVKNLGFETVIPDTALQEKINYLIYHEIKESDHLNQELYYEILEEAVERL---N 189
Query: 287 VNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNKKLTL 334
VI+G E+ + + ID LA T+ A + + TL
Sbjct: 190 CEKVILGCTELSLMHEFAEDNHYPVIDAQSILADRTIERALAERNETL 237
>gi|209518824|ref|ZP_03267637.1| aspartate racemase [Burkholderia sp. H160]
gi|209500709|gb|EEA00752.1| aspartate racemase [Burkholderia sp. H160]
Length = 486
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 28/183 (15%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVR-IG 220
LE GA I +PC+ +HA+ + IP +++ + L+++ G+R G
Sbjct: 314 LEDGGADIIAIPCNTAHAFVDRIQPYLGIPIVNMLTVTVRYLRDSF-------PGLRDFG 366
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIG-- 278
VLAT T+ +G YQ+ L++QG + P A V ++A+ + G + G
Sbjct: 367 VLATSGTIGSGVYQKALESQGLHQIAPGAALQARV----MDAIYGNN--GVKAGFTTGQC 420
Query: 279 -------IQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-----KCIDPMDALARSTVTWA 326
++ L+ V V++G E+ +LP + + + + +DP + LAR + +A
Sbjct: 421 QEDIIAAVEGLIAEGVEVVLLGCTELPILLPAGEFVGRNGGRVQLVDPTEVLARQCIAYA 480
Query: 327 RSN 329
+
Sbjct: 481 KGG 483
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 10/167 (5%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
E+ G V+PC +SH + +++ S+P + + E V ++ + + RIGV
Sbjct: 76 FEKRGVTMAVLPCFLSHTFIDELTANTSLPIVDIVEAVRSHVQR------KFPAAKRIGV 129
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI---EALNHRDMEG-ARNLLRI 277
LA+D ++ + FEVV P A + I + + ++ G LLR
Sbjct: 130 LASDYVREKRLFERYFASPEFEVVHPRTADDTDTVTKAIYGSDGIKSGNLRGRPVELLRA 189
Query: 278 GIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVT 324
+ L+ + V+ ++ G E+ V + L +D A A+ V+
Sbjct: 190 ACESLVDQGVDVIVPGMTEIALVAEEIGKLQVPLVDSNMAYAQYVVS 236
>gi|449916618|ref|ZP_21796953.1| putative amino acid recemase [Streptococcus mutans 15JP3]
gi|449981106|ref|ZP_21817611.1| putative amino acid recemase [Streptococcus mutans 5SM3]
gi|450087952|ref|ZP_21854546.1| putative amino acid recemase [Streptococcus mutans NV1996]
gi|450125704|ref|ZP_21867787.1| putative amino acid recemase [Streptococcus mutans U2A]
gi|450131320|ref|ZP_21869411.1| putative amino acid recemase [Streptococcus mutans NLML8]
gi|450158902|ref|ZP_21879095.1| putative amino acid recemase [Streptococcus mutans 66-2A]
gi|449153915|gb|EMB57542.1| putative amino acid recemase [Streptococcus mutans NLML8]
gi|449154990|gb|EMB58526.1| putative amino acid recemase [Streptococcus mutans 15JP3]
gi|449176063|gb|EMB78429.1| putative amino acid recemase [Streptococcus mutans 5SM3]
gi|449217064|gb|EMC17139.1| putative amino acid recemase [Streptococcus mutans NV1996]
gi|449232226|gb|EMC31352.1| putative amino acid recemase [Streptococcus mutans U2A]
gi|449241761|gb|EMC40379.1| putative amino acid recemase [Streptococcus mutans 66-2A]
Length = 230
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 38/182 (20%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLK----- 138
TIG+IGG+S ST ++ + + N+ + +EL +HS K
Sbjct: 3 TIGLIGGMSWESTTSY-----------------YQLINET-IKKEL--GGLHSAKILLYS 42
Query: 139 SKTVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
+++H + + ++ L LEQAGA IV+ + H + + +IP L
Sbjct: 43 VDFAEIEHYQASGDWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPIL 102
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
H+ + A+ L E ++ ++G+L T T++ FY+EKL G EV++PD+A +
Sbjct: 103 HIAQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQAGIT 154
Query: 254 HV 255
V
Sbjct: 155 EV 156
>gi|86154055|ref|ZP_01072256.1| aspartate racemase [Campylobacter jejuni subsp. jejuni HB93-13]
gi|419669695|ref|ZP_14199467.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1997-11]
gi|85842469|gb|EAQ59683.1| aspartate racemase [Campylobacter jejuni subsp. jejuni HB93-13]
gi|380646543|gb|EIB63505.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1997-11]
Length = 231
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 34/172 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST+ + + + A+N++L + + +V
Sbjct: 3 TIGIIGGMSFESTITYYKTI------------------NQAINDKLKSLNSAKILLYSVN 44
Query: 144 LDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ I SQ+ + A LE AGA I++ + H ++ + +IP LH+
Sbjct: 45 FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ AK LK+ ++ +IG+L T T++ FY++ L + V+ P
Sbjct: 105 AKSSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKMLIEENISVITP 148
>gi|86149571|ref|ZP_01067801.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88597747|ref|ZP_01100980.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
84-25]
gi|218561766|ref|YP_002343545.1| amino acid recemase [Campylobacter jejuni subsp. jejuni NCTC 11168
= ATCC 700819]
gi|317509641|ref|ZP_07967211.1| aspartate racemase family protein [Campylobacter jejuni subsp.
jejuni 305]
gi|384447395|ref|YP_005655446.1| putative aspartate racemase [Campylobacter jejuni subsp. jejuni
IA3902]
gi|403054889|ref|YP_006632294.1| amino acid recemase [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
gi|407941552|ref|YP_006857192.1| aspartate racemase [Campylobacter jejuni subsp. jejuni PT14]
gi|415731130|ref|ZP_11473362.1| aspartate racemase family protein [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|419624048|ref|ZP_14157164.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 23218]
gi|419626529|ref|ZP_14159509.1| putative racemase [Campylobacter jejuni subsp. jejuni LMG 23223]
gi|419629994|ref|ZP_14162704.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 60004]
gi|419631054|ref|ZP_14163652.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 23264]
gi|419637862|ref|ZP_14170005.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 9879]
gi|419639908|ref|ZP_14171900.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 86605]
gi|419642122|ref|ZP_14173931.1| aspartate racemase [Campylobacter jejuni subsp. jejuni ATCC 33560]
gi|419647034|ref|ZP_14178478.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 53161]
gi|419647667|ref|ZP_14179024.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 9217]
gi|419650229|ref|ZP_14181453.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 2008-1025]
gi|419656611|ref|ZP_14187396.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 2008-988]
gi|419658440|ref|ZP_14189069.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1997-1]
gi|419661962|ref|ZP_14192276.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 2008-831]
gi|419663847|ref|ZP_14194033.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1997-4]
gi|419666500|ref|ZP_14196500.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1997-10]
gi|419671000|ref|ZP_14200678.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1997-14]
gi|419673380|ref|ZP_14202848.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 51037]
gi|419675895|ref|ZP_14205151.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 110-21]
gi|419677086|ref|ZP_14206246.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 87330]
gi|419680028|ref|ZP_14208964.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 87459]
gi|419683411|ref|ZP_14212112.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1213]
gi|419684772|ref|ZP_14213353.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1577]
gi|419689367|ref|ZP_14217659.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1854]
gi|419692197|ref|ZP_14220290.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1928]
gi|419695114|ref|ZP_14223013.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 23210]
gi|85839839|gb|EAQ57098.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88190051|gb|EAQ94027.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
84-25]
gi|112359472|emb|CAL34256.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
NCTC 11168 = ATCC 700819]
gi|284925378|gb|ADC27730.1| putative aspartate racemase [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315927766|gb|EFV07093.1| aspartate racemase family protein [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|315930862|gb|EFV09852.1| aspartate racemase family protein [Campylobacter jejuni subsp.
jejuni 305]
gi|380599602|gb|EIB19966.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 23218]
gi|380603211|gb|EIB23345.1| putative racemase [Campylobacter jejuni subsp. jejuni LMG 23223]
gi|380606649|gb|EIB26549.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 60004]
gi|380611597|gb|EIB31143.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 23264]
gi|380614640|gb|EIB33985.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 9879]
gi|380614812|gb|EIB34129.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 86605]
gi|380622192|gb|EIB40958.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 53161]
gi|380625311|gb|EIB43905.1| aspartate racemase [Campylobacter jejuni subsp. jejuni ATCC 33560]
gi|380627329|gb|EIB45730.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 9217]
gi|380628725|gb|EIB47018.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 2008-1025]
gi|380633426|gb|EIB51382.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1997-1]
gi|380634520|gb|EIB52396.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 2008-988]
gi|380639053|gb|EIB56564.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 2008-831]
gi|380642129|gb|EIB59416.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1997-4]
gi|380647714|gb|EIB64614.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1997-10]
gi|380649909|gb|EIB66578.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1997-14]
gi|380651076|gb|EIB67655.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 110-21]
gi|380653737|gb|EIB70137.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 51037]
gi|380655139|gb|EIB71466.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 87330]
gi|380656172|gb|EIB72447.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 87459]
gi|380658925|gb|EIB74917.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1213]
gi|380663180|gb|EIB78837.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1854]
gi|380666339|gb|EIB81884.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1577]
gi|380670360|gb|EIB85616.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1928]
gi|380679813|gb|EIB94652.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 23210]
gi|401780541|emb|CCK66233.1| amino acid recemase [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
gi|407905390|gb|AFU42219.1| aspartate racemase [Campylobacter jejuni subsp. jejuni PT14]
Length = 231
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 34/172 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST+ + + + A+N++L + + +V
Sbjct: 3 TIGIIGGMSFESTITYYKTI------------------NQAINDKLKSLNSAKILLYSVN 44
Query: 144 LDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ I SQ+ + A LE AGA I++ + H ++ + +IP LH+
Sbjct: 45 FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ AK LK+ ++ +IG+L T T++ FY++ L + V+ P
Sbjct: 105 AKSSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKMLIEENISVITP 148
>gi|450120580|ref|ZP_21865776.1| putative amino acid recemase [Streptococcus mutans ST6]
gi|449230073|gb|EMC29352.1| putative amino acid recemase [Streptococcus mutans ST6]
Length = 230
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 38/182 (20%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLK----- 138
TIG+IGG+S ST ++ + + N+ + +EL +HS K
Sbjct: 3 TIGLIGGMSWESTTSY-----------------YQLINET-IKKEL--GGLHSAKILLYS 42
Query: 139 SKTVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
+++H + + ++ L LEQAGA IV+ + H + + +IP L
Sbjct: 43 VDFAEIEHYQASGDWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPIL 102
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
H+ + A+ L E ++ ++G+L T T++ FY+EKL G EV++PD+A +
Sbjct: 103 HIAQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQAGIT 154
Query: 254 HV 255
V
Sbjct: 155 EV 156
>gi|148926885|ref|ZP_01810563.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
CG8486]
gi|145844462|gb|EDK21570.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
CG8486]
Length = 193
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 34/172 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST+ + + + A+N++L + + +V
Sbjct: 3 TIGIIGGMSFESTITYYKTI------------------NQAINDKLKSLNSAKILLYSVN 44
Query: 144 LDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ I SQ+ + A LE AGA I++ + H ++ + +IP LH+
Sbjct: 45 FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ AK LK+ ++ +IG+L T T++ FY++ L + V+ P
Sbjct: 105 AKSSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKMLIEENISVITP 148
>gi|421190809|ref|ZP_15648093.1| aspartate racemase [Oenococcus oeni AWRIB548]
gi|399973505|gb|EJO07670.1| aspartate racemase [Oenococcus oeni AWRIB548]
Length = 233
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 110/244 (45%), Gaps = 16/244 (6%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
GI+GG+ +T NF+ L + +++ LN +F+ + S ++ +
Sbjct: 5 FGILGGMGTMATENFVRTLDRLTEAHSDQ---------NFLNYLVFNHACISDRTAYI-F 54
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
D + L+ L A +V+ C+ +H + +++ +P L++ + K
Sbjct: 55 DRTKDNPLSFLKEDIQQLNSLSADFVVITCNTAHYFLPELTAIAKMPILNMPSLAVQACK 114
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALN 264
+ AG+ ++I +LATD +++G YQEK+ Q + ++PDK V+ + +
Sbjct: 115 KRT-----AGT-LKISILATDGIIASGLYQEKISAQSDQAIIPDKELQIQVMKFIYQDIK 168
Query: 265 HRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVT 324
+ A + +LL+ + + VI+G E ++ + + ID LA + V+
Sbjct: 169 QNNRIEADKYHHLVEKLLIKQKCDYVILGCTEFSVAQEREPYISDRVIDAQQVLANTAVS 228
Query: 325 WARS 328
A++
Sbjct: 229 MAKN 232
>gi|116491073|ref|YP_810617.1| aspartate racemase [Oenococcus oeni PSU-1]
gi|118586271|ref|ZP_01543727.1| aspartate racemase [Oenococcus oeni ATCC BAA-1163]
gi|419857687|ref|ZP_14380391.1| aspartate racemase [Oenococcus oeni AWRIB202]
gi|421185472|ref|ZP_15642883.1| aspartate racemase [Oenococcus oeni AWRIB318]
gi|421186274|ref|ZP_15643667.1| aspartate racemase [Oenococcus oeni AWRIB418]
gi|421188950|ref|ZP_15646282.1| aspartate racemase [Oenococcus oeni AWRIB419]
gi|116091798|gb|ABJ56952.1| aspartate racemase [Oenococcus oeni PSU-1]
gi|118433287|gb|EAV39997.1| aspartate racemase [Oenococcus oeni ATCC BAA-1163]
gi|399964283|gb|EJN98937.1| aspartate racemase [Oenococcus oeni AWRIB419]
gi|399964653|gb|EJN99294.1| aspartate racemase [Oenococcus oeni AWRIB318]
gi|399967227|gb|EJO01709.1| aspartate racemase [Oenococcus oeni AWRIB418]
gi|410497464|gb|EKP88937.1| aspartate racemase [Oenococcus oeni AWRIB202]
Length = 233
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 107/244 (43%), Gaps = 16/244 (6%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
GI+GG+ +T NF+ L + +++ LN +F+ + ++ +
Sbjct: 5 FGILGGMGTMATENFVRTLDRLTEAHSDQ---------NFLNYLVFNHACIPDRTAYI-F 54
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
D + L+ L A +V+ C+ +H + +++ +P L++ + K
Sbjct: 55 DRTKDNPLPFLKEDIQQLNSLSADFVVITCNTAHYFLPELTAIAKMPILNMPSLAVQACK 114
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALN 264
+ ++I +LATD T+++G YQEK+ Q + ++PDK V+ + +
Sbjct: 115 K------RTAGTLKISILATDGTIASGLYQEKISAQSDQAIIPDKELQIQVMKFIYQDIK 168
Query: 265 HRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVT 324
+ A + +LL+ + + VI+G E ++ + + ID LA + V+
Sbjct: 169 QNNRIEADKYHHLVEKLLIKQKCDYVILGCTEFSVAQEREPYISDRVIDAQQVLANTAVS 228
Query: 325 WARS 328
A++
Sbjct: 229 MAKN 232
>gi|14520631|ref|NP_126106.1| aspartate racemase [Pyrococcus abyssi GE5]
gi|5457847|emb|CAB49337.1| racD-2 aspartate racemase [Pyrococcus abyssi GE5]
gi|380741161|tpe|CCE69795.1| TPA: aspartate racemase [Pyrococcus abyssi GE5]
Length = 232
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 24/215 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEEC--PPFVVCNDPALNEELFHASVHSLKSKTV 142
IGIIGG + STL + K + S + E+ P ++ ++N F + + +
Sbjct: 4 IGIIGGTTPESTLYYYQKYIEISREKFEKYVYPELIIY---SINFREFFQNPEGWEGRKK 60
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
L + A LE+AGA I + H DV ++P + + + VA+E
Sbjct: 61 ILINAAKA-----------LERAGAELIAFSANTPHIVFDDVQREVNVPMVSIIDAVAEE 109
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
+ +K R+ +L T T+SA FY + L+ +G EVV+P+ E + E
Sbjct: 110 VIRRGVK--------RVLLLGTKTTMSADFYIKALEKKGLEVVVPNDEEKEELNRIIFEE 161
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
L D++ ++++ + + VI+G E+
Sbjct: 162 LAFGDLKNKDWIVKLIERYKESENIEGVILGCTEL 196
>gi|452959243|gb|EME64583.1| aspartate racemase [Amycolatopsis decaplanina DSM 44594]
Length = 237
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE AGA +V+ + H +++G +P LH+ + A +K +K R+G+
Sbjct: 71 LEAAGADFVVLCTNTMHKVADRLTDGLGVPLLHLADTTAAAIKAVDVK--------RVGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPTIEALNHRDMEGARNLLRIG 278
L T T++ FY+E+L G +V++P D+ T+ VI E ++ E +R R
Sbjct: 123 LGTGFTMAQPFYRERLAAHGLDVLVPGERDRETVHRVIYD--ELVHGVVTEDSRERYREV 180
Query: 279 IQLLLVRAVNAVIIGSDEMQGVL-PKDDPL 307
I L+ +I G E++ ++ P+D P+
Sbjct: 181 IARLVEEGAEGIIYGCTEIELLVGPEDSPV 210
>gi|445405410|ref|ZP_21431387.1| aspartate racemase [Acinetobacter baumannii Naval-57]
gi|444782160|gb|ELX06071.1| aspartate racemase [Acinetobacter baumannii Naval-57]
Length = 242
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 40/178 (22%)
Query: 84 TIGIIGGVSVSST-----------LNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST N LGKL +SAK ++ N E
Sbjct: 3 TIGLLGGMSWESTSLYYQQINRMVQNKLGKL--HSAK--------IILNSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ +L++K + + GA L + LE+AGA CI++ + H + + ++PF
Sbjct: 48 -IAALQAKGLWQE--AGAY---LAEQAQNLEKAGADCILVCTNTMHKVAPQIEDAITVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
+H+ + AKE+ ++ ++ +L T T+ FY+ +LQ+ G EV++P+ A
Sbjct: 102 IHIADATAKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDLGIEVIIPNDA 151
>gi|126739826|ref|ZP_01755517.1| aspartate racemase [Roseobacter sp. SK209-2-6]
gi|126719058|gb|EBA15769.1| aspartate racemase [Roseobacter sp. SK209-2-6]
Length = 230
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCND---PALNEELFHASVHSLKSK 140
IGI+GG+ +T+ + +++ + A D + P +V N+ P+ + L H +
Sbjct: 6 IGILGGMGPEATVLMMQRIIAGTDASDDCDHVPLIVDNNTQVPSRIDALVHEAGE--DPG 63
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
V + RG L AGA ++MPC+ +H + + E +PFL++ E A
Sbjct: 64 VVLAEMARG------------LSAAGAEALIMPCNTAHHYAPQIIEASDVPFLNMVELTA 111
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVV-LPDKATMEHVI 256
+++ E SG +G+LA+ A G ++ L G + V L + AT+ +I
Sbjct: 112 RKIAS------EVASGALVGILASPAVRKTGLFERTLAEVGLQAVYLSEDATLLRII 162
>gi|450035820|ref|ZP_21835225.1| putative amino acid recemase [Streptococcus mutans M21]
gi|449195035|gb|EMB96372.1| putative amino acid recemase [Streptococcus mutans M21]
Length = 230
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 38/182 (20%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLK----- 138
TIG+IGG+S ST + + + N+ + +EL +HS K
Sbjct: 3 TIGLIGGMSWESTTTY-----------------YQLINET-IKKEL--GGLHSAKILLYS 42
Query: 139 SKTVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
+++H + + ++ L LEQAGA IV+ + H + + +IP L
Sbjct: 43 VDFAEIEHYQASGDWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPIL 102
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
H+ + A+ L E ++ ++G+L T T++ FY+EKL G EV++PD+A +
Sbjct: 103 HIAQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQAGIT 154
Query: 254 HV 255
V
Sbjct: 155 EV 156
>gi|423640182|ref|ZP_17615800.1| aspartate racemase [Bacillus cereus VD166]
gi|401281581|gb|EJR87488.1| aspartate racemase [Bacillus cereus VD166]
Length = 224
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 111/255 (43%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVARCQTIYGAKYDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQRSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHVI 256
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K TM + I
Sbjct: 106 ETLQSIPE---------NTKRVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQI 156
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I I++ ++E AR L + + + L V+ VII ++ V +D +D
Sbjct: 157 ITYIKS---GEVEKARKLWSVLV-VQLKDEVDTVIIACTDLNVVASED------FVDSSQ 206
Query: 317 ALARSTVTWARSNKK 331
LA + V SN K
Sbjct: 207 CLANAVVRMYLSNTK 221
>gi|421083151|ref|ZP_15544030.1| Aspartate racemase family protein [Pectobacterium wasabiae CFBP
3304]
gi|401702377|gb|EJS92621.1| Aspartate racemase family protein [Pectobacterium wasabiae CFBP
3304]
Length = 236
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 30/218 (13%)
Query: 93 VSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEE---------LFHASVHSLKSKTVQ 143
VS TL +G + W S P + + N+ N+ L H ++ Q
Sbjct: 2 VSKTLGLIGGMSWEST-----IPYYRIINEYVKNQLGGLHSAKIILHSVDFHEIEQLQSQ 56
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
D + A+ L + L QAGA IV+ + H +V +P LH+ + L
Sbjct: 57 GDWAQAAIV--LGNIAIGLRQAGADAIVICTNTMHKVADEVEHASQLPLLHIADATGASL 114
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPD---KATMEHVIIPT 259
K+ LK ++G+L T T+ FY++++Q + G +V++PD K + +I
Sbjct: 115 KQHGLK--------KVGLLGTRYTMEQDFYRQRIQERFGVDVIVPDTKGKELVNRIIYDE 166
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
+ N D +R R IQ L + +I+G E+
Sbjct: 167 LCLGNINDT--SRQAYRDIIQQLEQQGAEGIILGCTEI 202
>gi|449999219|ref|ZP_21824389.1| putative amino acid recemase [Streptococcus mutans N29]
gi|449187140|gb|EMB88937.1| putative amino acid recemase [Streptococcus mutans N29]
Length = 230
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 82/188 (43%), Gaps = 50/188 (26%)
Query: 84 TIGIIGGVSVSSTLNF-----------LG-----KLVWYSAKDAEECPPFVVCNDPALNE 127
TIG+IGG+S ST ++ LG K++ YS AE
Sbjct: 3 TIGLIGGMSWESTTSYYQLINETIKKELGGLHSAKILLYSVDFAEI-------------- 48
Query: 128 ELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEG 187
E + AS KS V L LEQAGA IV+ + H + +
Sbjct: 49 EHYQASGDWAKSAKV------------LSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQ 96
Query: 188 CSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+IP LH+ + A+ L E ++ ++G+L T T++ FY+EKL G EV++P
Sbjct: 97 IAIPILHIAQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIP 148
Query: 248 DKATMEHV 255
D+A + V
Sbjct: 149 DQAGITEV 156
>gi|268317965|ref|YP_003291684.1| aspartate racemase [Rhodothermus marinus DSM 4252]
gi|262335499|gb|ACY49296.1| aspartate racemase [Rhodothermus marinus DSM 4252]
Length = 254
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 125/271 (46%), Gaps = 41/271 (15%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVC-NDPALNEELFHASVHSLKS 139
IG+IGG+ + L + + +A D E P + D + F L
Sbjct: 4 KVIGVIGGMGPYAGLELVRHIFDQTLAASDQEHLPVVLFSMGDRVPDRSAF------LFG 57
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHA---WHGDVSE----GCSIPF 192
KT + + A+++ +R E GA + +PC+ +HA ++ + E G +
Sbjct: 58 KTSE--NPAYAIAEQIR----MAESVGAVVVGIPCNTAHAPSIFNVMLEELARTGSRVRV 111
Query: 193 LHVGECVAKELKE--AKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
LH+ E + L+E +K R+GVL+T AT G Y++ L+ G+E V+ D++
Sbjct: 112 LHLIEETVRFLREHYPDVK--------RVGVLSTLATYRLGLYRKALEAAGYEAVIADES 163
Query: 251 TMEHVI-----IPT--IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK 303
E ++ P+ I+A +H + AR + GI+ L + V AV++G E+ +P+
Sbjct: 164 VQETIVNRAIFDPSYGIKAQSHPVSKIARQSVLTGIEHLRQKGVEAVVLGCTELPLAVPE 223
Query: 304 DDPLLKKCIDPMDALARSTV--TWARSNKKL 332
+ IDP ALAR+ + T+ K L
Sbjct: 224 PEVDGIPIIDPSLALARALIRETYPEQLKPL 254
>gi|443630840|ref|ZP_21115021.1| amino acid racemase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443348645|gb|ELS62701.1| amino acid racemase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 227
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 112/261 (42%), Gaps = 63/261 (24%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWY------SAKDAE-------ECPPFVVCNDPALNEELFH 131
IGI+ G+ ST F+ K++ Y +A D + CP + P ++E+
Sbjct: 2 IGILAGMGPKSTSPFIDKVIDYCQKLYGAANDIDYPHMMIYSCPTPFYADRPVDHDEMKR 61
Query: 132 ASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
A I GAV LE+ G I +PC+ +H ++ ++ + S+P
Sbjct: 62 AI-------------INGAVK---------LEKTGVDFIALPCNTAHVYYEEIQQALSVP 99
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ E KE+ P A V VL T+ T+ + YQ+ L+ G EVV D
Sbjct: 100 LLHIIEETIKEI------PHPAKKAV---VLGTEPTIQSAIYQKGLEANGQEVVHKDHWQ 150
Query: 252 ME-HVIIPTIEALNH-RDMEGARNLLRIGIQL---LLVRA---VNAVIIGSDEMQGVLPK 303
+ +I I+ NH + + L I L++ A +NAV+ D +Q +P
Sbjct: 151 QAVNQLIAGIKQPNHIQHTQALWQKLYEEISQHADLIISACTDLNAVL---DHIQSEIP- 206
Query: 304 DDPLLKKCIDPMDALARSTVT 324
ID D LA+STV+
Sbjct: 207 -------IIDSADCLAKSTVS 220
>gi|239831308|ref|ZP_04679637.1| aspartate racemase [Ochrobactrum intermedium LMG 3301]
gi|239823575|gb|EEQ95143.1| aspartate racemase [Ochrobactrum intermedium LMG 3301]
Length = 274
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ GA I++ + H D+ SIP +H+ + A+++K A L ++G+
Sbjct: 113 LERGGADFILICTNTMHKMADDIESATSIPLVHIADPTAEKIKAAGLS--------KVGL 164
Query: 222 LATDATLSAGFYQEKL-QNQGFEVVLPDKA---TMEHVIIPTIEALNHRDMEGARNLLRI 277
L T T+ FY+ +L G EV+ PD A T+ +I + RD +R R
Sbjct: 165 LGTAFTMEQDFYKGRLAAKHGLEVLTPDDADRKTVHDIIYQELVVGEVRD--ASREKYRA 222
Query: 278 GIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWA 326
I L+ R A+I+G E+ ++ + D + D A + V WA
Sbjct: 223 VINRLVRRGAEAIILGCTEIMLLIGQQDSSV-PVFDTTRLHAEAAVDWA 270
>gi|307729191|ref|YP_003906415.1| aspartate racemase [Burkholderia sp. CCGE1003]
gi|307583726|gb|ADN57124.1| aspartate racemase [Burkholderia sp. CCGE1003]
Length = 232
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 108/256 (42%), Gaps = 41/256 (16%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + + + N A H H+ +S +
Sbjct: 2 KTIGVIGGMSWESSAEY-----------------YRLLNRHAKARLGGH---HNARSLML 41
Query: 143 QLDHIRGAVSQNLRHKRAF----------LEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+D R Q H A LE+ GA+ +++ + H + + +PF
Sbjct: 42 TVDFARVEADQRAGHWDALGEQMADAARQLERGGAQLVMLATNTMHRVYESIERAIHVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKAT 251
LH+ + L+ A ++ R+G+L T T+ FY +L+ + G + + PD+A
Sbjct: 102 LHIADPTGSALRAAGVE--------RVGLLGTRYTMEQTFYTGRLRERYGLDTLAPDEAD 153
Query: 252 MEHVIIPTIEALNHRDME-GARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK 310
V + L H D++ +R + + I+ L R AVI+G E+ ++ + +L
Sbjct: 154 RADVHRIIYDELCHGDVKRESREVYQGVIESLRERGAQAVILGCTEITLLIKPEHSVL-P 212
Query: 311 CIDPMDALARSTVTWA 326
D A++ V WA
Sbjct: 213 VFDTTALHAQAAVEWA 228
>gi|449896828|ref|ZP_21789945.1| putative amino acid recemase [Streptococcus mutans R221]
gi|449261524|gb|EMC58996.1| putative amino acid recemase [Streptococcus mutans R221]
Length = 230
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 38/183 (20%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLK---- 138
TIG+IGG+S ST ++ F+ + + +EL +HS K
Sbjct: 2 KTIGLIGGMSWESTTSYY---------------QFI---NETIKKEL--GGLHSAKILLY 41
Query: 139 -SKTVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+++H + + ++ L LEQAGA IV+ + H + + +IP
Sbjct: 42 SVDFAEIEHYQASGDWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPI 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
LH+ + A+ L E ++ ++G+L T T++ FY+EKL G EV++PD+A +
Sbjct: 102 LHIAQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQAGI 153
Query: 253 EHV 255
V
Sbjct: 154 TEV 156
>gi|430841455|ref|ZP_19459374.1| aspartate racemase [Enterococcus faecium E1007]
gi|431071708|ref|ZP_19494679.1| aspartate racemase [Enterococcus faecium E1604]
gi|431586039|ref|ZP_19520554.1| aspartate racemase [Enterococcus faecium E1861]
gi|431739954|ref|ZP_19528873.1| aspartate racemase [Enterococcus faecium E2039]
gi|430494231|gb|ELA70481.1| aspartate racemase [Enterococcus faecium E1007]
gi|430567341|gb|ELB06427.1| aspartate racemase [Enterococcus faecium E1604]
gi|430593217|gb|ELB31203.1| aspartate racemase [Enterococcus faecium E1861]
gi|430604081|gb|ELB41581.1| aspartate racemase [Enterococcus faecium E2039]
Length = 243
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 170 IVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLS 229
IV+ C+ +H + ++ IP LH+ A EL + + R+ +L T+ ++
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL-------VRQHTTGRVAILGTEGSMK 132
Query: 230 AGFYQEKLQNQGFEVVLPDKATME---HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRA 286
AG Y+ +++N GFE V+PD A E ++I I+ +H + E +L ++ L
Sbjct: 133 AGIYEREVKNLGFETVIPDTALQEKINYLIYHEIKESDHLNQELYYEILEEAVERL---N 189
Query: 287 VNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNKKLTL 334
VI+G E+ + + ID LA T+ A + + L
Sbjct: 190 CEKVILGCTELSLMHEFAEDNHYPVIDAQSILADRTIERALAERNEAL 237
>gi|228929809|ref|ZP_04092825.1| amino-acid racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228829866|gb|EEM75487.1| amino-acid racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 224
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 107/254 (42%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ + SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQQSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
K + E + R+ +LAT+AT+ AG YQ+ + + E + ++ + I
Sbjct: 106 ETLKAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHYEQ--WQESIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L V+ II ++ V +D +D
Sbjct: 155 QIITYIKSGEVEEARELWS-ALVLQLKDEVDTAIIACTDLNVVASED------FVDSAQC 207
Query: 318 LARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 208 LAKAVVRMYLSNTK 221
>gi|229193040|ref|ZP_04319996.1| amino-acid racemase [Bacillus cereus ATCC 10876]
gi|228590487|gb|EEK48350.1| amino-acid racemase [Bacillus cereus ATCC 10876]
Length = 224
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 110/255 (43%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFKELQRSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHVI 256
K + E + R+ +LAT+AT+ AG YQ+ + + E + +K TM + I
Sbjct: 106 ETLKAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQI 156
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I I++ ++E AR L + + L V+ II ++ V +D +D
Sbjct: 157 ITYIKS---GEVEEARKLWS-ALVVQLKDEVDTAIIACTDLNVVASED------FVDSSQ 206
Query: 317 ALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 207 CLAKAVVRMYLSNIK 221
>gi|221633082|ref|YP_002522307.1| aspartate racemase [Thermomicrobium roseum DSM 5159]
gi|221156758|gb|ACM05885.1| aspartate racemase [Thermomicrobium roseum DSM 5159]
Length = 245
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 24/257 (9%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCN-DPALNEELFHASVHSL 137
+ + + IGI+GG+ +T++ K++ + + ++ V+ + DP S+
Sbjct: 1 MTRRSIIGILGGMGPLATVDLYRKIIEATPAERDQDHLHVIIDADP------------SI 48
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
+T L + L LE+AGA IV+PC+ +HA+ V SIP L +
Sbjct: 49 PDRTAALLTGGPDPTPWLLAGAQRLERAGADFIVVPCNTAHAFLPRVRASISIPILSM-- 106
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI- 256
A + A + P +G +G+LAT T+++ YQ+ L + ++PD E V
Sbjct: 107 IAATAERAAAVAP----TGSVVGLLATPGTIASRLYQQALAERRLRCIVPDPQWQERVTE 162
Query: 257 -IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPM 315
I ++A D E A +L G Q L+ A+I+G E+ V P + + +D
Sbjct: 163 AIALVKA-GRTDREVAALVLETGRQ-LIAHGAAALILGCTELPIVFPITE-VSVPVLDAT 219
Query: 316 DALARSTVTWARSNKKL 332
LA + V AR + L
Sbjct: 220 RILAETAVRIARGERPL 236
>gi|423657700|ref|ZP_17632999.1| aspartate racemase [Bacillus cereus VD200]
gi|401288872|gb|EJR94607.1| aspartate racemase [Bacillus cereus VD200]
Length = 224
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFIDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ + SIP LH+ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQDSLSIPILHIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ + E + R+ +LAT+AT+ A YQ+ + + E + T + +I
Sbjct: 106 ETLQAIPE---------TAKRVALLATEATVQADIYQDGIAKRNIEYI--HHETWQEMIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E A L + L L V+ VII ++ V ++ +D
Sbjct: 155 QIITCIKSGEIEKAHELWN-ALVLQLREEVDTVIIACTDLNVVASEN------FVDSSQC 207
Query: 318 LARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 208 LAKAVVRMYLSNTK 221
>gi|449885706|ref|ZP_21785747.1| putative amino acid recemase [Streptococcus mutans SA41]
gi|449254982|gb|EMC52864.1| putative amino acid recemase [Streptococcus mutans SA41]
Length = 230
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 38/182 (20%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLK----- 138
TIG+IGG+S ST + + + N+ + +EL +HS K
Sbjct: 3 TIGLIGGMSWESTATY-----------------YQLINET-IKKEL--GGLHSAKILLYS 42
Query: 139 SKTVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
+++H + + ++ L LEQAGA IV+ + H + + +IP L
Sbjct: 43 VDFAEIEHYQASGDWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPIL 102
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
H+ + A+ L E ++ ++G+L T T++ FY+EKL G EV++PD+A +
Sbjct: 103 HIAQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQAGIT 154
Query: 254 HV 255
V
Sbjct: 155 EV 156
>gi|419652928|ref|ZP_14183972.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 2008-894]
gi|380627626|gb|EIB46000.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 2008-894]
Length = 231
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 34/172 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST+ + + + A+N++L + + +V
Sbjct: 3 TIGIIGGMSFESTITYYKTI------------------NQAINDKLKSLNSAKILLYSVN 44
Query: 144 LDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ I SQ+ + A LE AGA I++ + H ++ + +IP LH+
Sbjct: 45 FEEIENLQSQDKWQEAAQILTQCAKKLELAGASFIIIATNTMHKVFDEIQQNINIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ AK LK+ ++ +IG+L T T++ FY++ L + V+ P
Sbjct: 105 AKSSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKMLIEENISVITP 148
>gi|336450530|ref|ZP_08620977.1| aspartate racemase [Idiomarina sp. A28L]
gi|336282353|gb|EGN75585.1| aspartate racemase [Idiomarina sp. A28L]
Length = 229
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 97/227 (42%), Gaps = 28/227 (12%)
Query: 83 NTIGIIGGVSVSST---LNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
TIG+IGG+S ST L + V +V D A EL HA
Sbjct: 2 KTIGLIGGMSWESTQVYYRLLNENVKQRLGGHHSAKVVLVSVDFAEIAELQHAGDWQ--- 58
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
A + L LE+AGA I++ + H +V+ S+P LH+ +
Sbjct: 59 ----------ATADILCDAAQALERAGADFILIGTNTMHKIADEVAAAVSVPLLHIIDVT 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME--HVII 257
A LK +K R+G+L T T+ GFY+ +LQ G EVV+P+ E H II
Sbjct: 109 AAALKARSIK--------RVGLLGTQFTMEQGFYRARLQAHGIEVVIPEPEEREFVHRII 160
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD 304
E + ++ ++ I L R VI+G E+ G+L +D
Sbjct: 161 YH-ELCQGQFLDVSKQAYLEIIAGLAARGAEGVILGCTEI-GMLLQD 205
>gi|24378582|ref|NP_720537.1| amino acid recemase [Streptococcus mutans UA159]
gi|449866516|ref|ZP_21779538.1| putative amino acid recemase [Streptococcus mutans U2B]
gi|449869698|ref|ZP_21780224.1| putative amino acid recemase [Streptococcus mutans 8ID3]
gi|449985942|ref|ZP_21819944.1| putative amino acid recemase [Streptococcus mutans NFSM2]
gi|450083304|ref|ZP_21852854.1| putative amino acid recemase [Streptococcus mutans N66]
gi|24376434|gb|AAN57843.1|AE014857_7 putative amino acid recemase [Streptococcus mutans UA159]
gi|449157834|gb|EMB61268.1| putative amino acid recemase [Streptococcus mutans 8ID3]
gi|449178550|gb|EMB80806.1| putative amino acid recemase [Streptococcus mutans NFSM2]
gi|449213560|gb|EMC13892.1| putative amino acid recemase [Streptococcus mutans N66]
gi|449263686|gb|EMC61051.1| putative amino acid recemase [Streptococcus mutans U2B]
Length = 230
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 50/189 (26%)
Query: 83 NTIGIIGGVSVSSTLNF-----------LG-----KLVWYSAKDAEECPPFVVCNDPALN 126
TIG+IGG+S ST ++ LG K++ YS D E + +D A +
Sbjct: 2 KTIGLIGGMSWESTTSYYQLINETIKKELGGLHSAKILLYSV-DFAEIEHYQASDDWAKS 60
Query: 127 EELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSE 186
E+ ++Q L EQAGA IV+ + H + +
Sbjct: 61 AEVL------------------SQIAQKL-------EQAGADFIVICTNTMHKVAPQIQK 95
Query: 187 GCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVL 246
+IP LH+ + A+ + E ++ ++G+L T T++ FY+EKL G EV++
Sbjct: 96 QIAIPILHIAQATAEAILENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLI 147
Query: 247 PDKATMEHV 255
PD+A + V
Sbjct: 148 PDQAGITEV 156
>gi|283955529|ref|ZP_06373024.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
1336]
gi|419622332|ref|ZP_14155566.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 23216]
gi|283792990|gb|EFC31764.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
1336]
gi|380599668|gb|EIB20028.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 23216]
Length = 231
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 34/172 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST+ + + + A+N++L + + +V
Sbjct: 3 TIGIIGGMSFESTITYYKTI------------------NQAINDKLKSLNSAKILLYSVN 44
Query: 144 LDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ I SQ+ + A LE AGA I++ + H ++ + +IP LH+
Sbjct: 45 FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ AK LK+ ++ +IG+L T T++ FY++ L + V+ P
Sbjct: 105 AKSSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKILIEENISVITP 148
>gi|157375863|ref|YP_001474463.1| hypothetical protein Ssed_2728 [Shewanella sediminis HAW-EB3]
gi|157318237|gb|ABV37335.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
Length = 230
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKSK 140
TIG+IGG+S ST+++ ALNE + +HS K
Sbjct: 2 KTIGMIGGMSWESTVSYY----------------------KALNEGVKQNLGGLHSAKIA 39
Query: 141 TVQLDHIR----------GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSI 190
V +D G + L +E AGA ++ + H ++S SI
Sbjct: 40 LVSVDFAEIERLQHSGEWGKTADILSDAAVSVEAAGADFFMICTNTMHKVADEISAKVSI 99
Query: 191 PFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDK 249
P LH+ + A++L +K ++G+L T T+ FY+ +L ++ G EVV+PD
Sbjct: 100 PLLHIADATAEQLVSDGVK--------KVGLLGTQFTMEQEFYRGRLTDRFGIEVVIPDS 151
Query: 250 ATMEHVIIPTIEALNHRDME-GARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDP 306
A E V E L + +R IQ L + AVI+G E+ ++ + D
Sbjct: 152 AQRERVHQIIYEELCQGQVNTTSREAYLAIIQDLQAQGAEAVILGCTEIALLVSQQDT 209
>gi|227551698|ref|ZP_03981747.1| aspartate racemase [Enterococcus faecium TX1330]
gi|257887166|ref|ZP_05666819.1| aspartate racemase [Enterococcus faecium 1,141,733]
gi|257895703|ref|ZP_05675356.1| aspartate racemase [Enterococcus faecium Com12]
gi|293377687|ref|ZP_06623876.1| aspartate racemase [Enterococcus faecium PC4.1]
gi|293571882|ref|ZP_06682898.1| aspartate racemase [Enterococcus faecium E980]
gi|431033044|ref|ZP_19490890.1| aspartate racemase [Enterococcus faecium E1590]
gi|431106154|ref|ZP_19497311.1| aspartate racemase [Enterococcus faecium E1613]
gi|431737523|ref|ZP_19526476.1| aspartate racemase [Enterococcus faecium E1972]
gi|431752062|ref|ZP_19540748.1| aspartate racemase [Enterococcus faecium E2620]
gi|227179139|gb|EEI60111.1| aspartate racemase [Enterococcus faecium TX1330]
gi|257823220|gb|EEV50152.1| aspartate racemase [Enterococcus faecium 1,141,733]
gi|257832268|gb|EEV58689.1| aspartate racemase [Enterococcus faecium Com12]
gi|291608136|gb|EFF37442.1| aspartate racemase [Enterococcus faecium E980]
gi|292643687|gb|EFF61808.1| aspartate racemase [Enterococcus faecium PC4.1]
gi|430564145|gb|ELB03329.1| aspartate racemase [Enterococcus faecium E1590]
gi|430569686|gb|ELB08676.1| aspartate racemase [Enterococcus faecium E1613]
gi|430598610|gb|ELB36345.1| aspartate racemase [Enterococcus faecium E1972]
gi|430614671|gb|ELB51651.1| aspartate racemase [Enterococcus faecium E2620]
Length = 243
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 170 IVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLS 229
IV+ C+ +H + ++ IP LH+ A EL + + R+ +L T+ ++
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL-------VRQHTTGRVAILGTEGSMK 132
Query: 230 AGFYQEKLQNQGFEVVLPDKATME---HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRA 286
AG Y+ +++N GFE V+PD A E ++I I+ +H + E +L ++ L
Sbjct: 133 AGIYEREVKNLGFETVIPDTALQEKINYLIYHEIKESDHLNQELYYEILEEAVERL---N 189
Query: 287 VNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNKKLTL 334
VI+G E+ + + ID LA T+ A + + L
Sbjct: 190 CEKVILGCTELSLMHEFAEDNHYPVIDAQSILADRTIERALAERNEAL 237
>gi|269797360|ref|YP_003311260.1| aspartate racemase [Veillonella parvula DSM 2008]
gi|269093989|gb|ACZ23980.1| aspartate racemase [Veillonella parvula DSM 2008]
Length = 231
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 21/225 (9%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIG+IGG+S ST+ + L E V+ + L+ ++
Sbjct: 3 TIGLIGGMSWESTITYYQVL--------NETIKQVLGGLHSAKCILYSVDFEEIEKCQAN 54
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
D R A + L LE+AGA IV+ + H + IP LH+ E A EL
Sbjct: 55 GDWDRSA--EILSDAAQSLEKAGADYIVICTNTMHKVADKIERHIHIPLLHIAEMTAVEL 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV--IIPTIE 261
+++ + ++G+L T T+ FY+ L+N+G VV+P++ +E V II
Sbjct: 113 EKSGI--------TKVGLLGTKYTMQQDFYKCILENRGIHVVIPNEDQVELVNSIIYNEL 164
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDP 306
L E + L I I L+ V VI+G E+ ++ +DD
Sbjct: 165 CLGVISNESKQQYLDI-IGDLVKSGVQGVILGCTEIGLLIKQDDT 208
>gi|51596944|ref|YP_071135.1| aspartate/glutamate racemase [Yersinia pseudotuberculosis IP 32953]
gi|51590226|emb|CAH21863.1| putative aspartate/glutamate racemase [Yersinia pseudotuberculosis
IP 32953]
Length = 231
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L+ AGA IV+ + H D+ C +P LH+ + A ++K+ + +IG+
Sbjct: 72 LKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADATAVQIKQQGID--------KIGL 123
Query: 222 LATDATLSAGFYQEKL-QNQGFEVVLPDKATMEHVIIPTIEALNHRDM-EGARNLLRIGI 279
L T T+ GFY+ +L + G EV+ PD E V E L + E +R+ R I
Sbjct: 124 LGTRYTMEQGFYRGRLTEKHGIEVITPDDTDREAVNRIIYEELCLGIISETSRDAYRRVI 183
Query: 280 QLLLVRAVNAVIIGSDEM 297
+ L + V +I G E+
Sbjct: 184 KKLEAQGVQGIIFGCTEI 201
>gi|257898273|ref|ZP_05677926.1| aspartate racemase [Enterococcus faecium Com15]
gi|257836185|gb|EEV61259.1| aspartate racemase [Enterococcus faecium Com15]
Length = 243
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 170 IVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLS 229
IV+ C+ +H + ++ IP LH+ A EL + + R+ +L T+ ++
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL-------VRQHTTGRVAILGTEGSMK 132
Query: 230 AGFYQEKLQNQGFEVVLPDKATME---HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRA 286
AG Y+ +++N GFE V+PD A E ++I I+ +H + E +L ++ L
Sbjct: 133 AGIYEREVKNLGFETVIPDTALQEKINYLIYHEIKESDHLNQELYYEILEEAVERL---N 189
Query: 287 VNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNKKLTL 334
VI+G E+ + + ID LA T+ A + + L
Sbjct: 190 CEKVILGCTELSLMHEFAEDNHYPVIDAQSILADRTIERALAERNEAL 237
>gi|448377524|ref|ZP_21560220.1| aspartate racemase [Halovivax asiaticus JCM 14624]
gi|445655468|gb|ELZ08313.1| aspartate racemase [Halovivax asiaticus JCM 14624]
Length = 252
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 92/224 (41%), Gaps = 35/224 (15%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
T+GI+GG+S ST + + D A+ +EL + L ++V
Sbjct: 18 TVGILGGMSSESTREYYRGI------------------DEAIGDELGGHNAGDLVIRSVN 59
Query: 144 LDHIRGAVSQNLRHKRAFL--------EQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
I + + + L E AGA +VM + H + E SIPF+H+
Sbjct: 60 FAEIERCIRTDQWDRAGDLLVDAALDIEAAGADFVVMATNTMHRVAPRLVEALSIPFVHI 119
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ A+ ++ ++ IGVL T A + FY ++ + G E ++P A E V
Sbjct: 120 VDVAAEAIRTDGIET--------IGVLGTAAVMEGEFYHDRFADHGIETLVPGAADREAV 171
Query: 256 IIPTIEALNHRD-MEGARNLLRIGIQLLLVRAVNAVIIGSDEMQ 298
+ L H + + +R I L+ R V++G E++
Sbjct: 172 DRIIFDELTHGEVLADSRERYLAIIDDLVDRGAEGVVLGCTEIE 215
>gi|165937010|ref|ZP_02225575.1| aspartate racemase family protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|384139400|ref|YP_005522102.1| putative aspartate/glutamate racemase [Yersinia pestis A1122]
gi|420547766|ref|ZP_15045633.1| putative aspartate/glutamate racemase [Yersinia pestis PY-01]
gi|420553094|ref|ZP_15050399.1| putative aspartate/glutamate racemase [Yersinia pestis PY-02]
gi|420558654|ref|ZP_15055261.1| putative aspartate/glutamate racemase [Yersinia pestis PY-03]
gi|420564111|ref|ZP_15060120.1| putative aspartate/glutamate racemase [Yersinia pestis PY-04]
gi|420569151|ref|ZP_15064697.1| putative aspartate/glutamate racemase [Yersinia pestis PY-05]
gi|420574807|ref|ZP_15069815.1| putative aspartate/glutamate racemase [Yersinia pestis PY-06]
gi|420580119|ref|ZP_15074640.1| putative aspartate/glutamate racemase [Yersinia pestis PY-07]
gi|420585465|ref|ZP_15079488.1| putative aspartate/glutamate racemase [Yersinia pestis PY-08]
gi|420590593|ref|ZP_15084101.1| putative aspartate/glutamate racemase [Yersinia pestis PY-09]
gi|420595984|ref|ZP_15088949.1| putative aspartate/glutamate racemase [Yersinia pestis PY-10]
gi|420601628|ref|ZP_15093975.1| putative aspartate/glutamate racemase [Yersinia pestis PY-11]
gi|420607056|ref|ZP_15098871.1| putative aspartate/glutamate racemase [Yersinia pestis PY-12]
gi|420612455|ref|ZP_15103723.1| putative aspartate/glutamate racemase [Yersinia pestis PY-13]
gi|420617828|ref|ZP_15108428.1| aspartate racemase family protein [Yersinia pestis PY-14]
gi|420623134|ref|ZP_15113183.1| putative aspartate/glutamate racemase [Yersinia pestis PY-15]
gi|420628223|ref|ZP_15117802.1| putative aspartate/glutamate racemase [Yersinia pestis PY-16]
gi|420633338|ref|ZP_15122395.1| putative aspartate/glutamate racemase [Yersinia pestis PY-19]
gi|420638540|ref|ZP_15127070.1| putative aspartate/glutamate racemase [Yersinia pestis PY-25]
gi|420644042|ref|ZP_15132076.1| putative aspartate/glutamate racemase [Yersinia pestis PY-29]
gi|420649297|ref|ZP_15136839.1| putative aspartate/glutamate racemase [Yersinia pestis PY-32]
gi|420654944|ref|ZP_15141916.1| putative aspartate/glutamate racemase [Yersinia pestis PY-34]
gi|420660424|ref|ZP_15146833.1| putative aspartate/glutamate racemase [Yersinia pestis PY-36]
gi|420665736|ref|ZP_15151596.1| putative aspartate/glutamate racemase [Yersinia pestis PY-42]
gi|420670614|ref|ZP_15156034.1| aspartate racemase family protein [Yersinia pestis PY-45]
gi|420675957|ref|ZP_15160896.1| putative aspartate/glutamate racemase [Yersinia pestis PY-46]
gi|420681566|ref|ZP_15165972.1| putative aspartate/glutamate racemase [Yersinia pestis PY-47]
gi|420686876|ref|ZP_15170702.1| putative aspartate/glutamate racemase [Yersinia pestis PY-48]
gi|420692089|ref|ZP_15175283.1| putative aspartate/glutamate racemase [Yersinia pestis PY-52]
gi|420697862|ref|ZP_15180359.1| putative aspartate/glutamate racemase [Yersinia pestis PY-53]
gi|420703603|ref|ZP_15184989.1| aspartate racemase family protein [Yersinia pestis PY-54]
gi|420709081|ref|ZP_15189754.1| putative aspartate/glutamate racemase [Yersinia pestis PY-55]
gi|420714522|ref|ZP_15194610.1| putative aspartate/glutamate racemase [Yersinia pestis PY-56]
gi|420720025|ref|ZP_15199352.1| putative aspartate/glutamate racemase [Yersinia pestis PY-58]
gi|420725511|ref|ZP_15204153.1| putative aspartate/glutamate racemase [Yersinia pestis PY-59]
gi|420731108|ref|ZP_15209169.1| putative aspartate/glutamate racemase [Yersinia pestis PY-60]
gi|420736166|ref|ZP_15213744.1| putative aspartate/glutamate racemase [Yersinia pestis PY-61]
gi|420741610|ref|ZP_15218635.1| putative aspartate/glutamate racemase [Yersinia pestis PY-63]
gi|420747263|ref|ZP_15223449.1| putative aspartate/glutamate racemase [Yersinia pestis PY-64]
gi|420752766|ref|ZP_15228321.1| putative aspartate/glutamate racemase [Yersinia pestis PY-65]
gi|420758422|ref|ZP_15232941.1| putative aspartate/glutamate racemase [Yersinia pestis PY-66]
gi|420763806|ref|ZP_15237592.1| putative aspartate/glutamate racemase [Yersinia pestis PY-71]
gi|420769025|ref|ZP_15242279.1| putative aspartate/glutamate racemase [Yersinia pestis PY-72]
gi|420774022|ref|ZP_15246793.1| putative aspartate/glutamate racemase [Yersinia pestis PY-76]
gi|420779606|ref|ZP_15251723.1| putative aspartate/glutamate racemase [Yersinia pestis PY-88]
gi|420785197|ref|ZP_15256619.1| putative aspartate/glutamate racemase [Yersinia pestis PY-89]
gi|420790388|ref|ZP_15261262.1| aspartate racemase family protein [Yersinia pestis PY-90]
gi|420795902|ref|ZP_15266221.1| putative aspartate/glutamate racemase [Yersinia pestis PY-91]
gi|420800953|ref|ZP_15270757.1| putative aspartate/glutamate racemase [Yersinia pestis PY-92]
gi|420806324|ref|ZP_15275618.1| putative aspartate/glutamate racemase [Yersinia pestis PY-93]
gi|420811668|ref|ZP_15280428.1| aspartate racemase family protein [Yersinia pestis PY-94]
gi|420817198|ref|ZP_15285412.1| putative aspartate/glutamate racemase [Yersinia pestis PY-95]
gi|420822507|ref|ZP_15290181.1| putative aspartate/glutamate racemase [Yersinia pestis PY-96]
gi|420827591|ref|ZP_15294745.1| putative aspartate/glutamate racemase [Yersinia pestis PY-98]
gi|420833294|ref|ZP_15299900.1| putative aspartate/glutamate racemase [Yersinia pestis PY-99]
gi|420838147|ref|ZP_15304289.1| putative aspartate/glutamate racemase [Yersinia pestis PY-100]
gi|420843332|ref|ZP_15308989.1| putative aspartate/glutamate racemase [Yersinia pestis PY-101]
gi|420848984|ref|ZP_15314072.1| putative aspartate/glutamate racemase [Yersinia pestis PY-102]
gi|420854569|ref|ZP_15318840.1| putative aspartate/glutamate racemase [Yersinia pestis PY-103]
gi|420859849|ref|ZP_15323454.1| putative aspartate/glutamate racemase [Yersinia pestis PY-113]
gi|421764255|ref|ZP_16201047.1| aspartate/glutamate racemase [Yersinia pestis INS]
gi|165914873|gb|EDR33485.1| aspartate racemase family protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|342854529|gb|AEL73082.1| putative aspartate/glutamate racemase [Yersinia pestis A1122]
gi|391424427|gb|EIQ86798.1| putative aspartate/glutamate racemase [Yersinia pestis PY-01]
gi|391425610|gb|EIQ87854.1| putative aspartate/glutamate racemase [Yersinia pestis PY-02]
gi|391426353|gb|EIQ88541.1| putative aspartate/glutamate racemase [Yersinia pestis PY-03]
gi|391439583|gb|EIR00221.1| putative aspartate/glutamate racemase [Yersinia pestis PY-04]
gi|391440949|gb|EIR01471.1| putative aspartate/glutamate racemase [Yersinia pestis PY-05]
gi|391444538|gb|EIR04749.1| putative aspartate/glutamate racemase [Yersinia pestis PY-06]
gi|391456438|gb|EIR15463.1| putative aspartate/glutamate racemase [Yersinia pestis PY-07]
gi|391457363|gb|EIR16305.1| putative aspartate/glutamate racemase [Yersinia pestis PY-08]
gi|391459778|gb|EIR18530.1| putative aspartate/glutamate racemase [Yersinia pestis PY-09]
gi|391472533|gb|EIR29984.1| putative aspartate/glutamate racemase [Yersinia pestis PY-10]
gi|391474421|gb|EIR31717.1| putative aspartate/glutamate racemase [Yersinia pestis PY-11]
gi|391474975|gb|EIR32216.1| putative aspartate/glutamate racemase [Yersinia pestis PY-12]
gi|391488737|gb|EIR44548.1| putative aspartate/glutamate racemase [Yersinia pestis PY-13]
gi|391489935|gb|EIR45628.1| putative aspartate/glutamate racemase [Yersinia pestis PY-15]
gi|391491491|gb|EIR47046.1| aspartate racemase family protein [Yersinia pestis PY-14]
gi|391504304|gb|EIR58407.1| putative aspartate/glutamate racemase [Yersinia pestis PY-16]
gi|391504928|gb|EIR58979.1| putative aspartate/glutamate racemase [Yersinia pestis PY-19]
gi|391509772|gb|EIR63360.1| putative aspartate/glutamate racemase [Yersinia pestis PY-25]
gi|391520262|gb|EIR72825.1| putative aspartate/glutamate racemase [Yersinia pestis PY-29]
gi|391522441|gb|EIR74830.1| putative aspartate/glutamate racemase [Yersinia pestis PY-34]
gi|391523435|gb|EIR75746.1| putative aspartate/glutamate racemase [Yersinia pestis PY-32]
gi|391535339|gb|EIR86418.1| putative aspartate/glutamate racemase [Yersinia pestis PY-36]
gi|391538071|gb|EIR88904.1| putative aspartate/glutamate racemase [Yersinia pestis PY-42]
gi|391540299|gb|EIR90941.1| aspartate racemase family protein [Yersinia pestis PY-45]
gi|391553303|gb|EIS02639.1| putative aspartate/glutamate racemase [Yersinia pestis PY-46]
gi|391553838|gb|EIS03131.1| putative aspartate/glutamate racemase [Yersinia pestis PY-47]
gi|391554723|gb|EIS03941.1| putative aspartate/glutamate racemase [Yersinia pestis PY-48]
gi|391568378|gb|EIS16105.1| putative aspartate/glutamate racemase [Yersinia pestis PY-52]
gi|391569516|gb|EIS17093.1| putative aspartate/glutamate racemase [Yersinia pestis PY-53]
gi|391575137|gb|EIS21906.1| aspartate racemase family protein [Yersinia pestis PY-54]
gi|391582311|gb|EIS28079.1| putative aspartate/glutamate racemase [Yersinia pestis PY-55]
gi|391585037|gb|EIS30484.1| putative aspartate/glutamate racemase [Yersinia pestis PY-56]
gi|391595683|gb|EIS39696.1| putative aspartate/glutamate racemase [Yersinia pestis PY-58]
gi|391598311|gb|EIS42044.1| putative aspartate/glutamate racemase [Yersinia pestis PY-60]
gi|391599813|gb|EIS43395.1| putative aspartate/glutamate racemase [Yersinia pestis PY-59]
gi|391612664|gb|EIS54705.1| putative aspartate/glutamate racemase [Yersinia pestis PY-61]
gi|391613322|gb|EIS55301.1| putative aspartate/glutamate racemase [Yersinia pestis PY-63]
gi|391617199|gb|EIS58773.1| putative aspartate/glutamate racemase [Yersinia pestis PY-64]
gi|391625540|gb|EIS66018.1| putative aspartate/glutamate racemase [Yersinia pestis PY-65]
gi|391631882|gb|EIS71462.1| putative aspartate/glutamate racemase [Yersinia pestis PY-66]
gi|391636434|gb|EIS75463.1| putative aspartate/glutamate racemase [Yersinia pestis PY-71]
gi|391638695|gb|EIS77466.1| putative aspartate/glutamate racemase [Yersinia pestis PY-72]
gi|391648451|gb|EIS85961.1| putative aspartate/glutamate racemase [Yersinia pestis PY-76]
gi|391652314|gb|EIS89383.1| putative aspartate/glutamate racemase [Yersinia pestis PY-88]
gi|391656995|gb|EIS93551.1| putative aspartate/glutamate racemase [Yersinia pestis PY-89]
gi|391661407|gb|EIS97453.1| aspartate racemase family protein [Yersinia pestis PY-90]
gi|391669237|gb|EIT04383.1| putative aspartate/glutamate racemase [Yersinia pestis PY-91]
gi|391678581|gb|EIT12779.1| putative aspartate/glutamate racemase [Yersinia pestis PY-93]
gi|391679577|gb|EIT13697.1| putative aspartate/glutamate racemase [Yersinia pestis PY-92]
gi|391680410|gb|EIT14456.1| aspartate racemase family protein [Yersinia pestis PY-94]
gi|391692548|gb|EIT25377.1| putative aspartate/glutamate racemase [Yersinia pestis PY-95]
gi|391695402|gb|EIT27975.1| putative aspartate/glutamate racemase [Yersinia pestis PY-96]
gi|391697128|gb|EIT29541.1| putative aspartate/glutamate racemase [Yersinia pestis PY-98]
gi|391708529|gb|EIT39778.1| putative aspartate/glutamate racemase [Yersinia pestis PY-99]
gi|391713000|gb|EIT43822.1| putative aspartate/glutamate racemase [Yersinia pestis PY-100]
gi|391713613|gb|EIT44373.1| putative aspartate/glutamate racemase [Yersinia pestis PY-101]
gi|391725066|gb|EIT54566.1| putative aspartate/glutamate racemase [Yersinia pestis PY-102]
gi|391726789|gb|EIT56089.1| putative aspartate/glutamate racemase [Yersinia pestis PY-103]
gi|391728969|gb|EIT58007.1| putative aspartate/glutamate racemase [Yersinia pestis PY-113]
gi|411175569|gb|EKS45595.1| aspartate/glutamate racemase [Yersinia pestis INS]
Length = 230
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L+ AGA IV+ + H D+ C +P LH+ + A ++K+ + +IG+
Sbjct: 71 LKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADATAVQIKQQGID--------KIGL 122
Query: 222 LATDATLSAGFYQEKL-QNQGFEVVLPDKATMEHVIIPTIEALNHRDM-EGARNLLRIGI 279
L T T+ GFY+ +L + G EV+ PD E V E L + E +R+ R I
Sbjct: 123 LGTRYTMEQGFYRGRLTEKHGIEVITPDDTDREAVNRIIYEELCLGIISETSRDAYRRVI 182
Query: 280 QLLLVRAVNAVIIGSDEM 297
+ L + V +I G E+
Sbjct: 183 KKLEAQGVQGIIFGCTEI 200
>gi|442805114|ref|YP_007373263.1| aspartate racemase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740964|gb|AGC68653.1| aspartate racemase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 240
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 116/254 (45%), Gaps = 34/254 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G+IGG+ +T F+ +V + A+ E P +V + P++ + +
Sbjct: 6 LGVIGGLGPLATACFMEMVVKMTDARTDREHIPMIVYSKPSIPD---------------R 50
Query: 144 LDHIRGAVS----QNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH-VGEC 198
D I G S ++ LE+ GA I +PC ++ ++ + ++P + +GE
Sbjct: 51 TDFILGKSSADPCTDMVEIGKILEELGADFIAVPCVTAYFFYERLCREINVPIIDMIGE- 109
Query: 199 VAKELKEAKLKPLEAGSGV-RIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
A LK SGV R+G++ATD T++ GF ++ L+ G EVV P A+ + +++
Sbjct: 110 TAIYLKN---------SGVSRVGIMATDGTVTGGFLRKGLEKYGLEVVQP-SASGQKLVM 159
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I +M + LL +++G E+ V+ +D + C+D M+
Sbjct: 160 NMIYNGVKANMPIVMDEFYAVKNELLEAKAEVIVLGCTELS-VIHRDYDIGPGCLDAMEV 218
Query: 318 LARSTVTWARSNKK 331
LA+ +V + K
Sbjct: 219 LAQKSVLFCGGKIK 232
>gi|45442194|ref|NP_993733.1| aspartate/glutamate racemase [Yersinia pestis biovar Microtus str.
91001]
gi|108808080|ref|YP_651996.1| putative aspartate/glutamate racemase [Yersinia pestis Antiqua]
gi|108812350|ref|YP_648117.1| aspartate/glutamate racemase [Yersinia pestis Nepal516]
gi|145599280|ref|YP_001163356.1| aspartate/glutamate racemase [Yersinia pestis Pestoides F]
gi|149365232|ref|ZP_01887267.1| putative aspartate/glutamate racemase [Yersinia pestis CA88-4125]
gi|162419967|ref|YP_001604978.1| aspartate racemase family protein [Yersinia pestis Angola]
gi|165925365|ref|ZP_02221197.1| aspartate racemase family protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|166008162|ref|ZP_02229060.1| aspartate racemase family protein [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166214217|ref|ZP_02240252.1| aspartate racemase family protein [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167399552|ref|ZP_02305076.1| aspartate racemase family protein [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167421217|ref|ZP_02312970.1| aspartate racemase family protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167424711|ref|ZP_02316464.1| aspartate racemase family protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167469270|ref|ZP_02333974.1| resistance protein [Yersinia pestis FV-1]
gi|186896025|ref|YP_001873137.1| aspartate racemase [Yersinia pseudotuberculosis PB1/+]
gi|218929830|ref|YP_002347705.1| aspartate/glutamate racemase [Yersinia pestis CO92]
gi|229838326|ref|ZP_04458485.1| putative aspartate/glutamate racemase [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229895356|ref|ZP_04510529.1| putative aspartate/glutamate racemase [Yersinia pestis Pestoides A]
gi|229898892|ref|ZP_04514037.1| putative aspartate/glutamate racemase [Yersinia pestis biovar
Orientalis str. India 195]
gi|229902707|ref|ZP_04517824.1| putative aspartate/glutamate racemase [Yersinia pestis Nepal516]
gi|384414054|ref|YP_005623416.1| putative aspartate/glutamate racemase [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|45437058|gb|AAS62610.1| putative aspartate/glutamate racemase [Yersinia pestis biovar
Microtus str. 91001]
gi|108775998|gb|ABG18517.1| aspartate/glutamate racemase [Yersinia pestis Nepal516]
gi|108779993|gb|ABG14051.1| putative aspartate/glutamate racemase [Yersinia pestis Antiqua]
gi|115348441|emb|CAL21377.1| putative aspartate/glutamate racemase [Yersinia pestis CO92]
gi|145210976|gb|ABP40383.1| aspartate/glutamate racemase [Yersinia pestis Pestoides F]
gi|149291645|gb|EDM41719.1| putative aspartate/glutamate racemase [Yersinia pestis CA88-4125]
gi|162352782|gb|ABX86730.1| aspartate racemase family protein [Yersinia pestis Angola]
gi|165922972|gb|EDR40123.1| aspartate racemase family protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165992544|gb|EDR44845.1| aspartate racemase family protein [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166204573|gb|EDR49053.1| aspartate racemase family protein [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166960706|gb|EDR56727.1| aspartate racemase family protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167052056|gb|EDR63464.1| aspartate racemase family protein [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167056593|gb|EDR66362.1| aspartate racemase family protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|186699051|gb|ACC89680.1| aspartate racemase [Yersinia pseudotuberculosis PB1/+]
gi|229680154|gb|EEO76253.1| putative aspartate/glutamate racemase [Yersinia pestis Nepal516]
gi|229688440|gb|EEO80511.1| putative aspartate/glutamate racemase [Yersinia pestis biovar
Orientalis str. India 195]
gi|229694692|gb|EEO84739.1| putative aspartate/glutamate racemase [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229701664|gb|EEO89690.1| putative aspartate/glutamate racemase [Yersinia pestis Pestoides A]
gi|320014558|gb|ADV98129.1| putative aspartate/glutamate racemase [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 231
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L+ AGA IV+ + H D+ C +P LH+ + A ++K+ + +IG+
Sbjct: 72 LKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADATAVQIKQQGID--------KIGL 123
Query: 222 LATDATLSAGFYQEKL-QNQGFEVVLPDKATMEHVIIPTIEALNHRDM-EGARNLLRIGI 279
L T T+ GFY+ +L + G EV+ PD E V E L + E +R+ R I
Sbjct: 124 LGTRYTMEQGFYRGRLTEKHGIEVITPDDTDREAVNRIIYEELCLGIISETSRDAYRRVI 183
Query: 280 QLLLVRAVNAVIIGSDEM 297
+ L + V +I G E+
Sbjct: 184 KKLEAQGVQGIIFGCTEI 201
>gi|295676959|ref|YP_003605483.1| aspartate racemase [Burkholderia sp. CCGE1002]
gi|295436802|gb|ADG15972.1| aspartate racemase [Burkholderia sp. CCGE1002]
Length = 231
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ GA +++ + H + + + ++PFLH+ + L+ A ++ R+G+
Sbjct: 71 LERGGADLVILATNTMHRVYESIEQAITVPFLHIADPTGAALRAAGVE--------RVGL 122
Query: 222 LATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPTIEALNHRDMEGA-RNLLRIGI 279
L T T+ FY +L+ + G + ++PD V + L H +++ A R + + I
Sbjct: 123 LGTRYTMEQTFYTGRLRERYGLDTLVPDDDERTDVHRIIYDELCHGNVDDASRKVYQRVI 182
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWA 326
+ L R AVI+G E+ ++ +D +L D A++ V W+
Sbjct: 183 EHLAARGAQAVILGCTEITLLIKPEDSVL-PVFDTTALHAQAAVEWS 228
>gi|291288437|ref|YP_003505253.1| aspartate racemase [Denitrovibrio acetiphilus DSM 12809]
gi|290885597|gb|ADD69297.1| aspartate racemase [Denitrovibrio acetiphilus DSM 12809]
Length = 230
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 38/182 (20%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS--KT 141
TIG+IGG+S ST ++Y + E +N+ L +HS K +
Sbjct: 3 TIGLIGGMSWESTA------LYYKIINEE------------INKRL--GRLHSAKIVLYS 42
Query: 142 VQLDHIRGAVSQNLRHKRAF--------LEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
V D I +S+ + A L AGA CI++ + H DV SIPFL
Sbjct: 43 VDFDEIERNMSKERWDQTALILNGAATKLMSAGANCIMLCTNTMHKNAPDVRRSVSIPFL 102
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
H+ E A E+ A K + +L T T+ F +++ ++G E++ PD+ M+
Sbjct: 103 HIAEATAAEINIAGYK--------KAALLGTRFTMEEDFLKKEFNSKGIEIITPDRDDMK 154
Query: 254 HV 255
V
Sbjct: 155 LV 156
>gi|170694718|ref|ZP_02885869.1| aspartate racemase [Burkholderia graminis C4D1M]
gi|170140349|gb|EDT08526.1| aspartate racemase [Burkholderia graminis C4D1M]
Length = 232
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ GA +++ + H + + +PFLH+ + L+ A ++ R+G+
Sbjct: 71 LERGGAGLVMLATNTMHRVYESIERAIHVPFLHIADPTGNALRAAGVE--------RVGL 122
Query: 222 LATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPTIEALNHRDMEG-ARNLLRIGI 279
L T T+ FY +L+ + G E ++P++A V + L H +++ +R + + I
Sbjct: 123 LGTRYTMEQAFYTGRLRERYGLETLVPEEAQRADVHRIIYDELCHGNVKSESRAIYQGVI 182
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWA 326
+ L R AVI+G E+ ++ +D +L D A++ V WA
Sbjct: 183 ESLAARGAQAVILGCTEITLLIKAEDSVL-PVFDTTALHAQAAVEWA 228
>gi|444308789|ref|ZP_21144431.1| aspartate racemase [Ochrobactrum intermedium M86]
gi|443487837|gb|ELT50597.1| aspartate racemase [Ochrobactrum intermedium M86]
Length = 232
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ GA I++ + H D+ SIP +H+ + A+++K A L ++G+
Sbjct: 71 LERGGADFILICTNTMHKMADDIESATSIPLVHIADPTAEKIKAAGLS--------KVGL 122
Query: 222 LATDATLSAGFYQEKL-QNQGFEVVLPDKA---TMEHVIIPTIEALNHRDMEGARNLLRI 277
L T T+ FY+ +L G EV+ PD A T+ +I + RD +R R
Sbjct: 123 LGTAFTMEQDFYKGRLAAKHGLEVLTPDDADRKTVHDIIYQELVVGEVRD--ASREKYRA 180
Query: 278 GIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWA 326
I L+ R A+I+G E+ ++ + D + D A + V WA
Sbjct: 181 VINRLVRRGAEAIILGCTEIMLLIGQQDSSV-PVFDTTRLHAEAAVDWA 228
>gi|399003223|ref|ZP_10705891.1| aspartate racemase [Pseudomonas sp. GM18]
gi|398123244|gb|EJM12807.1| aspartate racemase [Pseudomonas sp. GM18]
Length = 230
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 12/167 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE GA C+V+ + H G + IPFLH+ + A L+AG+ VR+G+
Sbjct: 71 LEAGGADCVVLCTNTMHKVAGQIQAAIDIPFLHIAD-------PAGQAALDAGA-VRVGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATME--HVIIPTIEALNHRDMEGARNLLRIGI 279
L T T+ F +E+L +G V++P+ + H II E E +R + + I
Sbjct: 123 LGTAFTMEQEFLKERLTAKGLTVLVPEAEERQAVHRIIYD-ELCVGVISEASRQVYQRVI 181
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWA 326
+ L R A+I+G E+ G+L K + +D + AR+ V +A
Sbjct: 182 ESLTERGAQAIILGCTEI-GLLIKPEHSALPLLDTTELHARAAVAFA 227
>gi|419588944|ref|ZP_14124757.1| aspartate racemase [Campylobacter coli 317/04]
gi|169640262|gb|ACA61184.1| aspartate racemase [Campylobacter coli]
gi|169640269|gb|ACA61190.1| putative aspartate racemase [Campylobacter coli]
gi|380568843|gb|EIA91302.1| aspartate racemase [Campylobacter coli 317/04]
Length = 231
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 34/172 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST+ + + + A+N++L + + +V
Sbjct: 3 TIGIIGGMSFESTITYYKTI------------------NQAINDKLKSLNSAKILLYSVN 44
Query: 144 LDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ I SQ+ + A LE AGA I++ + H ++ + +IP LH+
Sbjct: 45 FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ AK LK+ ++ +IG+L T T++ FY++ L + V+ P
Sbjct: 105 AKSSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKILIEENISVITP 148
>gi|157414398|ref|YP_001481654.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
81116]
gi|384440759|ref|YP_005657062.1| Putative aspartate racemase [Campylobacter jejuni subsp. jejuni M1]
gi|419654469|ref|ZP_14185403.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 2008-872]
gi|419665928|ref|ZP_14195982.1| putative racemase [Campylobacter jejuni subsp. jejuni 1997-7]
gi|419680266|ref|ZP_14209129.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 140-16]
gi|419687014|ref|ZP_14215430.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1798]
gi|419697617|ref|ZP_14225347.1| putative racemase [Campylobacter jejuni subsp. jejuni LMG 23211]
gi|157385362|gb|ABV51677.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
81116]
gi|307747042|gb|ADN90312.1| Putative aspartate racemase [Campylobacter jejuni subsp. jejuni M1]
gi|380630989|gb|EIB49203.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 2008-872]
gi|380642274|gb|EIB59550.1| putative racemase [Campylobacter jejuni subsp. jejuni 1997-7]
gi|380660757|gb|EIB76695.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 140-16]
gi|380663167|gb|EIB78825.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1798]
gi|380677537|gb|EIB92402.1| putative racemase [Campylobacter jejuni subsp. jejuni LMG 23211]
Length = 231
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 34/172 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST+ + + + A+N++L + + +V
Sbjct: 3 TIGIIGGMSFESTITYYKTI------------------NQAINDKLKSLNSAKILLYSVN 44
Query: 144 LDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ I SQ+ + A LE AGA I++ + H ++ + +IP LH+
Sbjct: 45 FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ AK LK+ ++ +IG+L T T++ FY++ L + V+ P
Sbjct: 105 AKSSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKILIEENISVITP 148
>gi|415744811|ref|ZP_11474725.1| aspartate racemase family protein [Campylobacter jejuni subsp.
jejuni 327]
gi|315932541|gb|EFV11475.1| aspartate racemase family protein [Campylobacter jejuni subsp.
jejuni 327]
Length = 231
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 34/172 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST+ + + + A+N++L + + +V
Sbjct: 3 TIGIIGGMSFESTITYYKTI------------------NQAINDKLKSLNSAKILLYSVN 44
Query: 144 LDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ I SQ+ + A LE AGA I++ + H ++ + +IP LH+
Sbjct: 45 FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ AK LK+ ++ +IG+L T T++ FY++ L + V+ P
Sbjct: 105 AKSSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKILIEENISVITP 148
>gi|14591491|ref|NP_143571.1| aspartate racemase [Pyrococcus horikoshii OT3]
gi|209870333|pdb|2ZSK|A Chain A, Crystal Structure Of Ph1733, An Aspartate Racemase
Homologue, From Pyrococcus Horikoshii Ot3
gi|209870334|pdb|2ZSK|B Chain B, Crystal Structure Of Ph1733, An Aspartate Racemase
Homologue, From Pyrococcus Horikoshii Ot3
gi|3258164|dbj|BAA30847.1| 226aa long hypothetical aspartate racemase [Pyrococcus horikoshii
OT3]
Length = 226
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 26/224 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEEC--PPFVVCNDPALNEELFHASVHSLKSKTV 142
IGIIGG + STL + K + S + E+ P ++ ++N + F + + +
Sbjct: 4 IGIIGGTTPESTLYYYKKYIEISREKFEKYFYPELIIY---SINFKEFFQNPEGWEGRKK 60
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
L + A LE+AGA I + H DV ++P + + + VA+E
Sbjct: 61 ILINAAKA-----------LERAGAELIAFAANTPHLVFDDVQREVNVPMVSIIDAVAEE 109
Query: 203 LKEAKLKPLEAGSGVR-IGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
+ LK GVR + +L T T++A FY + L+ +G EVV+P+ E + E
Sbjct: 110 I----LK-----RGVRKVLLLGTKTTMTADFYIKTLEEKGLEVVVPNDEEKEELNRIIFE 160
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
L +++ ++R+ + + VI+G E+ + + D
Sbjct: 161 ELAFGNLKNKEWIVRLIEKYRESEGIEGVILGCTELPLAIKQGD 204
>gi|419634990|ref|ZP_14167311.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 55037]
gi|380613761|gb|EIB33229.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 55037]
Length = 231
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 34/172 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST+ + + + A+N++L + + +V
Sbjct: 3 TIGIIGGMSFESTITYYKTI------------------NQAINDKLKSLNSAKILLYSVN 44
Query: 144 LDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ I SQ+ + A LE AGA I++ + H ++ + +IP LH+
Sbjct: 45 FEEIENLQSQDKWQEAAQILTQCAKRLELAGANFIIIATNTMHKVFDEIQQNINIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ AK LK+ ++ +IG+L T T++ FY++ L + V+ P
Sbjct: 105 AKSSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKILIEENISVITP 148
>gi|421806679|ref|ZP_16242541.1| aspartate racemase [Acinetobacter baumannii OIFC035]
gi|410417222|gb|EKP68992.1| aspartate racemase [Acinetobacter baumannii OIFC035]
Length = 242
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 44/262 (16%)
Query: 84 TIGIIGGVSVSSTL-----------NFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST N LGKL +SAK ++ N
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQNKLGKL--HSAK--------IILN----------- 41
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
SV + T+Q + L + LE+AGA CI++ + H + ++PF
Sbjct: 42 SVDFEEIATLQAKGLWQEAGAYLAEQAMNLEKAGADCILVCTNTMHKVAPQIENAITVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
+H+ + AKE+ ++ ++ +L T T+ FY+ +LQ Q EV++P +A
Sbjct: 102 IHIADATAKEILSQNIR--------KVALLGTAFTMEQDFYKARLQEQRIEVIIPSEANR 153
Query: 253 E--HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK 310
+ H II L + + + + + + L+ +I+G E+ +L D
Sbjct: 154 KIVHRIIYDELCLGVINPDSRQKYMTV-VDDLIAEGAEGIILGCTEI-CMLIGDVKFSVP 211
Query: 311 CIDPMDALARSTVTWARSNKKL 332
D A+ V +A KK+
Sbjct: 212 LFDTTTIHAKEAVNFALEQKKV 233
>gi|114284|sp|P29079.1|RACD_ENTFC RecName: Full=Aspartate racemase
gi|47644|emb|CAA43598.1| aspartate racemase [Streptococcus thermophilus]
Length = 243
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 170 IVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLS 229
IV+ C+ +H + ++ IP LH+ A EL + + R+ +L T+ ++
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL-------VRQHTTGRVAILGTEGSMK 132
Query: 230 AGFYQEKLQNQGFEVVLPDKATME---HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRA 286
AG Y+ +++N GFE V+PD A E ++I I+ +H + E +L ++ L
Sbjct: 133 AGIYEREVKNLGFETVIPDTALQEKINYLIYHEIKESDHLNQELYYEILEEAVERL---N 189
Query: 287 VNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNKKLTL 334
VI+G E+ + + ID LA T+ A + + L
Sbjct: 190 CEKVILGCTELSLMNEFAEDNHYPVIDAQSILADRTIERALAERNEAL 237
>gi|425054596|ref|ZP_18458101.1| aspartate racemase [Enterococcus faecium 505]
gi|403035548|gb|EJY46934.1| aspartate racemase [Enterococcus faecium 505]
Length = 243
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 170 IVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLS 229
IV+ C+ +H + ++ IP LH+ A EL + + R+ +L T+ ++
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL-------VRQHTTGRVAILGTEGSMK 132
Query: 230 AGFYQEKLQNQGFEVVLPDKATME---HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRA 286
AG Y+ +++N GFE V+PD A E ++I I+ +H + E +L ++ L
Sbjct: 133 AGIYEREVKNLGFETVIPDTALQEKINYLIYHEIKESDHLNQELYYEILEEAVERL---N 189
Query: 287 VNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNKKLTL 334
VI+G E+ + + ID LA T+ A + + L
Sbjct: 190 CEKVILGCTELSLMNEFAEDNHYPVIDAQSILADRTIERALAERNEAL 237
>gi|91762966|ref|ZP_01264931.1| Aspartate racemase [Candidatus Pelagibacter ubique HTCC1002]
gi|91718768|gb|EAS85418.1| Aspartate racemase [Candidatus Pelagibacter ubique HTCC1002]
Length = 248
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 103/223 (46%), Gaps = 22/223 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IGI+GG+ + L+F KL + K +E P F++ N+ S+ +T
Sbjct: 2 IGILGGMGTQAGLDFCNKLAMLNRGKSDQEYPLFML-----YNKSNIPGRPESIGVQTKS 56
Query: 144 LDHIRGAVSQNLRHKRAF---------LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH 194
L I ++ R LE++G + IV+PC+ +H W+ D+ + IP ++
Sbjct: 57 LSTIPRNSKNTKKYNRVLKSLLDGCKSLEKSGCKFIVIPCNTAHYWYEDLKKKIKIPIIN 116
Query: 195 VGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEH 254
+ + V + K++ +IG+LAT+ TL Y +K+ + + ++ P
Sbjct: 117 MPKEVFIQTKKS------CKKNSKIGLLATEGTLKTEIY-DKIFKKDYVLIKPLSNLQTS 169
Query: 255 VIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
+ TI+ + +++ A ++ I+ L+ + +I+G E+
Sbjct: 170 SVNKTIKHVKMGNIKLAEKTIKPAIKYLIKQKCKKIILGCTEI 212
>gi|449918388|ref|ZP_21797307.1| putative amino acid recemase [Streptococcus mutans 1SM1]
gi|449160397|gb|EMB63666.1| putative amino acid recemase [Streptococcus mutans 1SM1]
Length = 230
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 38/182 (20%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLK----- 138
TIG+IGG+S ST ++ F+ + + +EL +HS K
Sbjct: 3 TIGLIGGMSWESTTSYY---------------QFI---NETIKKEL--GGLHSAKILLYS 42
Query: 139 SKTVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
+++H + + ++ L LEQAGA IV+ + H + + +IP L
Sbjct: 43 VDFAEIEHYQASGDWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPIL 102
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
H+ + A+ L E ++ ++G L T T++ FY+EKL G EV++PD+A +
Sbjct: 103 HIAQATAEALLENGIQ--------KVGFLGTKYTMTQDFYKEKLLEAGLEVLIPDQAGIT 154
Query: 254 HV 255
V
Sbjct: 155 EV 156
>gi|402700666|ref|ZP_10848645.1| aspartate racemase [Pseudomonas fragi A22]
Length = 499
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 45/263 (17%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GI+GGV ++T++F+ K+V ++ A +E VV +P + + +T
Sbjct: 254 LGIVGGVGPAATVDFMAKVVTHTPAGRDQEHIKMVVEQNPQIPD------------RTAN 301
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L H + + LE AGA I +PC+ +HA+ + +P +++ E
Sbjct: 302 LLHDATDPTMAMYATCKRLESAGANAIAIPCNTAHAFVERIQAYLRVPIVNM----LTET 357
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+A ++ + G+G +G+LAT T+ + YQ+ + G ++++P +AL
Sbjct: 358 VDAIVR--QYGAGKTVGLLATSGTIKSQVYQDAARRTGLQIIVPGV---------DYQAL 406
Query: 264 NHRDMEGARNL---LRIGI---QLLLV------RAVNAVIIGSDEMQGVLPKDDPLLKK- 310
+ GAR + GI QLLL +I+G E+ VL +
Sbjct: 407 VMDSIYGARGIKAGFTEGICKDQLLLAAEHLCESGAEVLILGCTELPLVLEHSKAYMING 466
Query: 311 ----CIDPMDALARSTVTWARSN 329
IDP LA + +R N
Sbjct: 467 HQVALIDPTTLLAIKCIQLSREN 489
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 32/186 (17%)
Query: 70 LRSKS-PDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEE 128
++SKS P +GI+GG+ + + KLV A V D
Sbjct: 1 MKSKSAPSGDAATVRKLGIVGGLGSLAGGDLFYKLVKSRA----------VLEDQGRYHF 50
Query: 129 LFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFL-------EQAGARCIVMPCHISHAWH 181
LF H K + LD +GA N+ ++ ++ E++G +++PC SH +
Sbjct: 51 LFEQ--HPFKDVLLPLD--KGA---NMTSRKFYVFQVCKTFEESGVDAVMLPCFASHTFR 103
Query: 182 GDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQG 241
++ E SIP L + + + KP G+ +G++A+D G + E+
Sbjct: 104 AEIQEELSIPVLDMMAALRSHIDHIA-KP-----GITLGIVASDYVRHCGLF-ERYFGTD 156
Query: 242 FEVVLP 247
F++V P
Sbjct: 157 FKLVYP 162
>gi|419621324|ref|ZP_14154623.1| aspartate racemase, partial [Campylobacter jejuni subsp. jejuni
51494]
gi|380596153|gb|EIB16857.1| aspartate racemase, partial [Campylobacter jejuni subsp. jejuni
51494]
Length = 229
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 34/172 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST+ + + + A+N++L + + +V
Sbjct: 3 TIGIIGGMSFESTITYYKTI------------------NQAINDKLKSLNSAKILLYSVN 44
Query: 144 LDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ I SQ+ + A LE AGA I++ + H ++ + +IP LH+
Sbjct: 45 FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ AK LK+ ++ +IG+L T T++ FY++ L + V+ P
Sbjct: 105 AKSSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKILIEENISVITP 148
>gi|168185453|ref|ZP_02620088.1| aspartate racemase [Clostridium botulinum C str. Eklund]
gi|169296186|gb|EDS78319.1| aspartate racemase [Clostridium botulinum C str. Eklund]
Length = 252
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 28/251 (11%)
Query: 82 ANTIGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
+ T+GI+GG+ ++T L K++ Y+ KD E +V ++P + + + +S
Sbjct: 3 SKTVGILGGMGPAATAELLKKIIEYTQVEKDQEHIH-IIVEDNPKIPDRTSYILGNSE-- 59
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
D + ++ L+ GA I+MPC+ +H + + + +IPF+++ + V
Sbjct: 60 -----DPTNALIETAMK-----LKLMGADIIIMPCNTAHFFLDKIQKVVNIPFINMIDEV 109
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
AK + L S RIG+LAT T Y+ +N +V+ P + + +I+
Sbjct: 110 AKYI-------LNICSDKRIGLLATQGTYKGKVYETCFKNYNIDVITP-REKYKDIILDL 161
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPL--LK--KCIDPM 315
I + +L++ ++ + + +++G E+ +L D LK + I
Sbjct: 162 IYQVKKGVKSFDESLVKRILKEFKDKNIKTIVLGCTELP-ILFNDIRFNELKDFRFISST 220
Query: 316 DALARSTVTWA 326
D LAR TV A
Sbjct: 221 DILARETVKRA 231
>gi|226325276|ref|ZP_03800794.1| hypothetical protein COPCOM_03068 [Coprococcus comes ATCC 27758]
gi|225206624|gb|EEG88978.1| aspartate racemase [Coprococcus comes ATCC 27758]
Length = 234
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 24/180 (13%)
Query: 150 AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEA--K 207
A++Q+ R LE G I +PC+ SH + D+ + S+P +++ E + + EA K
Sbjct: 64 AITQDARD----LEMLGVENIAIPCNTSHYFLEDIQKSTSVPIINMVEESVRYVVEAHPK 119
Query: 208 LKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRD 267
+K +IG++ TD T+ A Y + G V+P +A + V+ +L + D
Sbjct: 120 VK--------KIGIMGTDGTMQAKTYHRACEKFGITPVVPGEACQKDVM-----SLIYDD 166
Query: 268 ME----GARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTV 323
++ G +N L + +AVI+ E+ V + + C+D MD L R ++
Sbjct: 167 IKKGKPGDKNKFDRAYNDLKAKGCDAVILACTEIS-VFKEYYQVPADCMDAMDVLVRESI 225
>gi|410663839|ref|YP_006916210.1| racemase [Simiduia agarivorans SA1 = DSM 21679]
gi|409026196|gb|AFU98480.1| racemase [Simiduia agarivorans SA1 = DSM 21679]
Length = 230
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 28/221 (12%)
Query: 83 NTIGIIGGVSVSSTLNFLGKL-VWYSAKDAEECPPFVVCN--DPALNEELFHASVHSLKS 139
TIG+IGG+S ST+++ L + A+ ++ N D A E + HA
Sbjct: 2 KTIGLIGGMSWESTVSYYHALNLGIKARLGGLHSAKIILNSVDFADIERMQHAG------ 55
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
RG ++ RA +E AGA +++ + H D+ IP LH+ +
Sbjct: 56 ------DWRGTAEILIQAARA-VETAGADFLMICTNTMHKVAPDIKSAIDIPLLHIADAT 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATME--HVI 256
A +L+ A + R+G+L T T++ FY +L+++ G EVV+PD + H I
Sbjct: 109 AAQLR--------ADNITRVGLLGTRFTMAEDFYTGRLRDRFGIEVVVPDATAQQTVHDI 160
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
I L + + L I I+ L R AVI+G E+
Sbjct: 161 IYQELCLGDIKSDSRQRYLEI-IERLAQRGAQAVILGCTEI 200
>gi|301056262|ref|YP_003794473.1| aspartate racemase [Bacillus cereus biovar anthracis str. CI]
gi|300378431|gb|ADK07335.1| aspartate racemase [Bacillus cereus biovar anthracis str. CI]
Length = 224
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 107/254 (42%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDIDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ + SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQQSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
K + E + R+ +LAT+AT+ AG YQ+ + + E + ++ + I
Sbjct: 106 ETLKAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHYEQ--WQESIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L V+ II ++ V +D +D
Sbjct: 155 QIITYIKSGEVEEARELWS-ALVLQLKDEVDTAIIACTDLNVVASED------FVDSAQC 207
Query: 318 LARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 208 LAKAVVRMYLSNTK 221
>gi|355628628|ref|ZP_09049889.1| hypothetical protein HMPREF1020_03968 [Clostridium sp. 7_3_54FAA]
gi|354819699|gb|EHF04138.1| hypothetical protein HMPREF1020_03968 [Clostridium sp. 7_3_54FAA]
Length = 230
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 104/237 (43%), Gaps = 39/237 (16%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS--K 140
TIG+IGG+S ST+ + + + N+ + +EL +HS K
Sbjct: 2 KTIGMIGGMSWESTVLY-----------------YQIINE-TVGKEL--GGLHSAKILLY 41
Query: 141 TVQLDHIRG--------AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+V D I + L LE+AGA +V+ + H + IP
Sbjct: 42 SVDFDEIEKYQAGGEWEKAGEVLSEAAVNLEKAGADYLVICTNTMHKVVPQIQTHIQIPI 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
+H+ E A LKE++++ ++ +L T T++ FY++KL + G EV++P++ +
Sbjct: 102 IHIAEATADMLKESRIR--------KVALLGTKYTMTQDFYKKKLTDAGIEVLIPEQPDI 153
Query: 253 EHVIIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
E V + L H + E ++ I L VI+G E+ ++ ++D L
Sbjct: 154 ETVNNVIFKELCHGVVSENSKQQYLAIIDKLAAEGAQGVILGCTEIGMMISREDTQL 210
>gi|449971415|ref|ZP_21814364.1| putative amino acid recemase, partial [Streptococcus mutans 2VS1]
gi|450060086|ref|ZP_21843599.1| putative amino acid recemase, partial [Streptococcus mutans NLML4]
gi|449172199|gb|EMB74834.1| putative amino acid recemase, partial [Streptococcus mutans 2VS1]
gi|449202405|gb|EMC03325.1| putative amino acid recemase, partial [Streptococcus mutans NLML4]
Length = 227
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LEQAGA IV+ + H + + +IP LH+ + A+ L E ++ ++G+
Sbjct: 68 LEQAGADFIVICTNTMHKVAPQIQKQIAIPILHIAQATAEALLENGIQ--------KVGL 119
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
L T T++ FY+EKL G EV++PD+A + V
Sbjct: 120 LGTKYTMTQDFYKEKLLEAGLEVLIPDQAGITEV 153
>gi|326793009|ref|YP_004310830.1| aspartate racemase [Clostridium lentocellum DSM 5427]
gi|326543773|gb|ADZ85632.1| aspartate racemase [Clostridium lentocellum DSM 5427]
Length = 229
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 43/235 (18%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL--FHASVHSLKSKT 141
TIG+IGG+S ST+ + + + + E L FH++ L S
Sbjct: 3 TIGMIGGMSWESTVTYYQMV------------------NQVVKERLGGFHSAKCILYS-- 42
Query: 142 VQLDHIRGAVSQN--------LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
V D I ++ L LE++GA I++ + H + +IP L
Sbjct: 43 VDFDEIEACQAKGEWEKSGEILADAAVNLERSGADFIIICTNTMHKVADQIQAKVNIPIL 102
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
H+ E A LKE ++ ++ +L T T+ FY+ KL QG EV++P++A +E
Sbjct: 103 HIAEVTAGRLKENTIE--------KVALLGTKYTMQQDFYKSKLIEQGIEVLIPNEADIE 154
Query: 254 HVIIPTIE---ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
V+ TI L + +RI I+ L + VI+G E+ ++ ++D
Sbjct: 155 -VVNNTIYNELCLGSVLETSKKEFIRI-IEELADKGAEGVILGCTEIGLLIRQED 207
>gi|229124324|ref|ZP_04253514.1| amino-acid racemase [Bacillus cereus 95/8201]
gi|228659147|gb|EEL14797.1| amino-acid racemase [Bacillus cereus 95/8201]
Length = 224
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 106/254 (41%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ + SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFDELQQSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
K + E + R+ +LAT+AT+ AG YQ+ + + E ++ + I
Sbjct: 106 ETLKAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYTHYEQ--WQESIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L V+ II ++ V +D +D
Sbjct: 155 QIITYIKSGEVEEARELWS-ALVLQLKDEVDTAIIACTDLNVVASED------FVDSAQC 207
Query: 318 LARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 208 LAKAVVRMYLSNTK 221
>gi|225866744|ref|YP_002752122.1| aspartate racemase family protein [Bacillus cereus 03BB102]
gi|225790790|gb|ACO31007.1| aspartate racemase family protein [Bacillus cereus 03BB102]
Length = 224
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 107/254 (42%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ + SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFKELQQSISIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K + I
Sbjct: 106 ETLQVIPE---------NTKRVALLATEATVQAGIYQDGIAKRNIEYIHHEK--WQESIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L V+ II ++ V +D +D
Sbjct: 155 QIISCIKGGEIEKARELWN-ALVLQLKDEVDTAIIACTDLNVVASED------FVDSAQC 207
Query: 318 LARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 208 LAKAVVKMYLSNTK 221
>gi|423549493|ref|ZP_17525820.1| aspartate racemase [Bacillus cereus ISP3191]
gi|401191246|gb|EJQ98269.1| aspartate racemase [Bacillus cereus ISP3191]
Length = 224
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 108/255 (42%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ + SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFDELQQSLSIPILNIVD 105
Query: 198 CVAKEL-KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
K + K AK R+ +LAT+AT+ AG YQ+ + + E + ++ + I
Sbjct: 106 ETLKAIPKTAK----------RVALLATEATVQAGIYQDGIAKRNIEYIHYEQ--WQESI 153
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I + ++E AR L + L L V+ II ++ V +D +D
Sbjct: 154 NQIITYIKSGEVEEARELWS-ALVLQLKDEVDTAIIACTDLNVVASED------FVDSAQ 206
Query: 317 ALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 207 CLAKAVVRMYLSNTK 221
>gi|387785224|ref|YP_006250320.1| putative amino acid recemase [Streptococcus mutans LJ23]
gi|449876455|ref|ZP_21782786.1| putative amino acid recemase [Streptococcus mutans S1B]
gi|449903223|ref|ZP_21792018.1| putative amino acid recemase [Streptococcus mutans M230]
gi|449911399|ref|ZP_21795117.1| putative amino acid recemase [Streptococcus mutans OMZ175]
gi|449943096|ref|ZP_21806293.1| putative amino acid recemase [Streptococcus mutans 11A1]
gi|450041002|ref|ZP_21837135.1| putative amino acid recemase [Streptococcus mutans T4]
gi|450077686|ref|ZP_21850603.1| putative amino acid recemase [Streptococcus mutans N3209]
gi|450180388|ref|ZP_21887212.1| putative amino acid recemase [Streptococcus mutans 24]
gi|379131625|dbj|BAL68377.1| putative amino acid recemase [Streptococcus mutans LJ23]
gi|449149705|gb|EMB53496.1| putative amino acid recemase [Streptococcus mutans 11A1]
gi|449198177|gb|EMB99302.1| putative amino acid recemase [Streptococcus mutans T4]
gi|449210906|gb|EMC11333.1| putative amino acid recemase [Streptococcus mutans N3209]
gi|449248364|gb|EMC46614.1| putative amino acid recemase [Streptococcus mutans 24]
gi|449252290|gb|EMC50273.1| putative amino acid recemase [Streptococcus mutans S1B]
gi|449258342|gb|EMC55926.1| putative amino acid recemase [Streptococcus mutans OMZ175]
gi|449261401|gb|EMC58877.1| putative amino acid recemase [Streptococcus mutans M230]
Length = 230
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 38/182 (20%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLK----- 138
TIG+IGG+S ST ++ + + N+ + +EL +HS K
Sbjct: 3 TIGLIGGMSWESTTSY-----------------YQLINET-IKKEL--GGLHSAKILLYS 42
Query: 139 SKTVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
+++H + + ++ L LEQAGA IV+ + H + + +IP L
Sbjct: 43 VDFAEIEHYQASGDWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPIL 102
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
H+ + A+ + E ++ ++G+L T T++ FY+EKL G EV++PD+A +
Sbjct: 103 HIAQATAEAILENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQAGIT 154
Query: 254 HV 255
V
Sbjct: 155 EV 156
>gi|376002630|ref|ZP_09780454.1| aspartate racemase [Arthrospira sp. PCC 8005]
gi|375328956|emb|CCE16207.1| aspartate racemase [Arthrospira sp. PCC 8005]
Length = 262
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIG 220
LE AGA +V+ C+ SH ++ V +IP++H+ + + +K L R+G
Sbjct: 81 ILEVAGADFLVITCNTSHGFYNLVQSQLNIPWIHIMQETVRFIK------LHYPGLNRVG 134
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLP------DKATMEHVIIPT--IEALNHRDMEGAR 272
+LATD TL A YQ+ L G + P + M + P I++ + +
Sbjct: 135 ILATDGTLQAHLYQDSLTAAGLTAIAPVLNSELQQDIMNAIYHPIWGIKSTGVQILPPPI 194
Query: 273 NLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNKKL 332
++L I+ L ++ +I G E+ L D IDP++ LA T+ A + +
Sbjct: 195 HILETAIKWLEIQGSELLIAGCTEISVALKLLDKTSLIAIDPLEILANLTLDLAFGYENI 254
>gi|298717599|ref|YP_003730241.1| aspartate/glutamate racemase [Pantoea vagans C9-1]
gi|298361788|gb|ADI78569.1| putative aspartate/glutamate racemase [Pantoea vagans C9-1]
Length = 246
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 18/150 (12%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+AGA+ IV+ + H +S IP LH+ + + +++A ++ ++G+
Sbjct: 87 LERAGAQFIVLCTNTMHKVAAQISAATGIPLLHIADATGRRIQQAGIR--------KVGL 138
Query: 222 LATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPTIEALNHRDMEG-----ARNLL 275
LAT T+ FY +LQ Q G EV+ PD+A V E + H G +R
Sbjct: 139 LATRFTMEQDFYHGRLQQQFGLEVMTPDEADRLFV----HEVIYHELCLGEINPASRRRY 194
Query: 276 RIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
R +Q L+ + A+I+G E+ ++ D
Sbjct: 195 REIMQSLVAQGAEAIILGCTEITLLVDATD 224
>gi|254423626|ref|ZP_05037344.1| aspartate racemase subfamily [Synechococcus sp. PCC 7335]
gi|196191115|gb|EDX86079.1| aspartate racemase subfamily [Synechococcus sp. PCC 7335]
Length = 237
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 109/249 (43%), Gaps = 29/249 (11%)
Query: 84 TIGIIGGVSVSSTLNF---LGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
TIG++GG+S ST+ + L ++V + D EEL +LK K
Sbjct: 3 TIGLLGGMSWESTIEYYRLLNEIVRTELGGLHSAKILMYSVDF---EELV-----ALKHK 54
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
+ ++ L A LE AGA CI++ + H ++ +IP +H+ + A
Sbjct: 55 DAWPE-----IANLLATAAAQLEGAGAECILLATNTMHKVAEAITLSTTIPLIHIADATA 109
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPT 259
E+K ++ R+G+L T T+ FY+ +L NQ G V +P++ H I
Sbjct: 110 DEIKRHAIQ--------RVGLLGTRFTMEESFYKGRLVNQHGLTVQVPNEIE-RHAIHDI 160
Query: 260 I--EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I E + +R+ R I L+ A+I+G E+ ++ K+D + D
Sbjct: 161 IYNELCLGQTRPASRDQFRAVISNLVDSGAEAIILGCTEIGLLIKKEDSTV-PLFDTTAI 219
Query: 318 LARSTVTWA 326
A++ WA
Sbjct: 220 HAKAAAQWA 228
>gi|375148634|ref|YP_005011075.1| aspartate racemase [Niastella koreensis GR20-10]
gi|361062680|gb|AEW01672.1| aspartate racemase [Niastella koreensis GR20-10]
Length = 229
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L+QAGA CI++ + H + + +PF+H+ E AK +KE +K ++ +
Sbjct: 71 LKQAGADCIILAANTPHLIADKIKQAVQLPFIHIAEATAKAIKETGIK--------KVAL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
L T T+ FY + L +G ++P++A ++
Sbjct: 123 LGTRFTMENSFYTDALAAKGISTLVPNEAERNYI 156
>gi|449892228|ref|ZP_21788346.1| putative amino acid recemase [Streptococcus mutans SF12]
gi|449256282|gb|EMC54112.1| putative amino acid recemase [Streptococcus mutans SF12]
Length = 230
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 50/188 (26%)
Query: 84 TIGIIGGVSVSSTLNF-----------LG-----KLVWYSAKDAEECPPFVVCNDPALNE 127
TIG+IGG+S ST ++ LG K++ YS D E + D A +
Sbjct: 3 TIGLIGGMSWESTTSYYQLINETIKKELGGLHSAKILLYSV-DFAEIEHYQASGDWAKSA 61
Query: 128 ELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEG 187
E+ ++Q L EQAGA IV+ + H + +
Sbjct: 62 EVL------------------SQIAQKL-------EQAGADFIVICTNTMHKVAPQIQKQ 96
Query: 188 CSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+IP LH+ + A+ + E ++ ++G+L T T++ FY+EKL G EV++P
Sbjct: 97 IAIPILHIAQATAEAILENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIP 148
Query: 248 DKATMEHV 255
D+A + V
Sbjct: 149 DQAGITEV 156
>gi|449095894|ref|YP_007428385.1| amino acid racemase [Bacillus subtilis XF-1]
gi|449029809|gb|AGE65048.1| amino acid racemase [Bacillus subtilis XF-1]
Length = 230
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 34/172 (19%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPALNEELFHASV---HS 136
IGI+ G+ ST F+ K++ Y A + + P ++ + P F+A H+
Sbjct: 5 IGILAGMGPKSTSPFIDKVIDYCQKLYGASNDIDYPHMMIYSCPTP----FYADRPIDHA 60
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
K + I GAV LE+ G I +PC+ +H ++ ++ + S+P LH+
Sbjct: 61 EMKKAI----IDGAVK---------LEKTGVDFIALPCNTAHVYYEEIQQALSVPMLHIV 107
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
E KE+ P A V VL T+ T+ + YQ+ L+ G EVV D
Sbjct: 108 EETIKEI------PQPAKKAV---VLGTEPTIQSAIYQKVLKENGKEVVHKD 150
>gi|345304245|ref|YP_004826147.1| aspartate racemase [Rhodothermus marinus SG0.5JP17-172]
gi|345113478|gb|AEN74310.1| aspartate racemase [Rhodothermus marinus SG0.5JP17-172]
Length = 254
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 125/271 (46%), Gaps = 41/271 (15%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV--WYSAKDAEECPPFVVC-NDPALNEELFHASVHSLKS 139
IG+IGG+ + L + + +A D E P + D + F L
Sbjct: 4 KVIGVIGGMGPYAGLELVRHIFDQTLAASDQEHLPVVLFSMGDRVPDRSAF------LFG 57
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHA---WHGDVSE----GCSIPF 192
KT + + A+++ +R E GA + +PC+ +HA ++ + E G +
Sbjct: 58 KTSE--NPAYAIAEQIR----MAESVGAVVVGIPCNTAHAPSIFNVMLEELARTGSRVRV 111
Query: 193 LHVGECVAKELKE--AKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
LH+ E + L+E +K R+GVL+T AT G Y++ L+ G+E V+ D++
Sbjct: 112 LHLIEETVRFLREHYPDVK--------RVGVLSTLATYRLGLYRKALEAAGYEAVIADES 163
Query: 251 TMEHVI-----IPT--IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK 303
E ++ P+ I+A +H + AR + GI+ L + V AV++G E+ +P+
Sbjct: 164 VQETIVNRAIFDPSYGIKAQSHPVSKIARQSVLTGIEHLRQKGVEAVVLGCTELPLAVPE 223
Query: 304 DDPLLKKCIDPMDALARSTV--TWARSNKKL 332
+ IDP ALAR+ + T+ K L
Sbjct: 224 LEVDGVPIIDPSLALARALIRETYPEQLKPL 254
>gi|357235453|ref|ZP_09122796.1| hypothetical protein STRCR_0483 [Streptococcus criceti HS-6]
gi|356883435|gb|EHI73635.1| hypothetical protein STRCR_0483 [Streptococcus criceti HS-6]
Length = 230
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 38/182 (20%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLK----- 138
TIG+IGG+S ST + + + N+ + +EL +HS K
Sbjct: 3 TIGLIGGMSWESTTTY-----------------YQLINET-IKKEL--GGLHSAKILLYS 42
Query: 139 SKTVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
+++H + + ++ L LEQAGA IV+ + H + E +IP L
Sbjct: 43 VDFAEIEHYQASGDWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQEKITIPIL 102
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
H+ + A+ L E ++ ++G+L T T++ FY++KL G EV++PD+ +
Sbjct: 103 HIAQATAETLLENGIQ--------KVGLLGTKYTMTQDFYKDKLLEAGLEVLIPDQTGIA 154
Query: 254 HV 255
V
Sbjct: 155 EV 156
>gi|423071601|ref|ZP_17060375.1| hypothetical protein HMPREF9177_01692 [Streptococcus intermedius
F0413]
gi|355364075|gb|EHG11810.1| hypothetical protein HMPREF9177_01692 [Streptococcus intermedius
F0413]
Length = 230
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 81/188 (43%), Gaps = 50/188 (26%)
Query: 84 TIGIIGGVSVSSTLNF-----------LG-----KLVWYSAKDAEECPPFVVCNDPALNE 127
TIG+IGG+S ST ++ LG K++ YS AE
Sbjct: 3 TIGLIGGMSWESTADYYQLINETIKKELGGLQSAKILLYSVDFAEI-------------- 48
Query: 128 ELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEG 187
E + AS KS V L LEQAGA IV+ + H + +
Sbjct: 49 EHYQASGDWAKSAEV------------LSQIAQKLEQAGADFIVICTNTMHKVDPQIQKQ 96
Query: 188 CSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+IP LH+ + A+ L E ++ ++G L T T++ FY+EKL G EV++P
Sbjct: 97 IAIPILHIAQATAEALLENGIQ--------KVGPLGTKYTMTQDFYKEKLLEAGLEVLIP 148
Query: 248 DKATMEHV 255
D+A + V
Sbjct: 149 DQAGITEV 156
>gi|306992071|pdb|3OJC|A Chain A, Crystal Structure Of A Putative AspGLU RACEMASE FROM
YERSINIA PESTIS
gi|306992072|pdb|3OJC|B Chain B, Crystal Structure Of A Putative AspGLU RACEMASE FROM
YERSINIA PESTIS
gi|306992073|pdb|3OJC|C Chain C, Crystal Structure Of A Putative AspGLU RACEMASE FROM
YERSINIA PESTIS
gi|306992074|pdb|3OJC|D Chain D, Crystal Structure Of A Putative AspGLU RACEMASE FROM
YERSINIA PESTIS
Length = 231
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L+ AGA IV+ + H D+ C +P LH+ + A ++K+ + +IG+
Sbjct: 72 LKHAGAEVIVVCTNTXHKVADDIEAACGLPLLHIADATAVQIKQQGID--------KIGL 123
Query: 222 LATDATLSAGFYQEKL-QNQGFEVVLPDKATMEHVIIPTIEALNHRDM-EGARNLLRIGI 279
L T T GFY+ +L + G EV+ PD E V E L + E +R+ R I
Sbjct: 124 LGTRYTXEQGFYRGRLTEKHGIEVITPDDTDREAVNRIIYEELCLGIISETSRDAYRRVI 183
Query: 280 QLLLVRAVNAVIIGSDEM 297
+ L + V +I G E+
Sbjct: 184 KKLEAQGVQGIIFGCTEI 201
>gi|209524670|ref|ZP_03273217.1| aspartate racemase [Arthrospira maxima CS-328]
gi|423067680|ref|ZP_17056470.1| aspartate racemase [Arthrospira platensis C1]
gi|209494814|gb|EDZ95122.1| aspartate racemase [Arthrospira maxima CS-328]
gi|406710785|gb|EKD05988.1| aspartate racemase [Arthrospira platensis C1]
Length = 265
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 14/174 (8%)
Query: 161 FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIG 220
LE AGA +V+ C+ SH ++ V +IP++H+ + + +K L R+G
Sbjct: 84 ILEVAGADFLVITCNTSHGFYNLVQPQLNIPWIHIMQETVRFIK------LHYPGLNRVG 137
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLP------DKATMEHVIIPT--IEALNHRDMEGAR 272
+LATD TL A YQ+ L G + P + M + P I+A + +
Sbjct: 138 ILATDGTLQAHLYQDSLTAAGLTAIAPALNSELQQDIMNAIYHPIWGIKATGVQILPPPI 197
Query: 273 NLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWA 326
++L+ I+ L + +I G E+ L D IDP++ +A T+ A
Sbjct: 198 HILKTAIKWLESQGAELLIAGCTEISVALKLLDKTSLIAIDPLEIMANLTLDLA 251
>gi|418031341|ref|ZP_12669826.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. SC-8]
gi|351472400|gb|EHA32513.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. SC-8]
Length = 230
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 111/249 (44%), Gaps = 39/249 (15%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPALNEELFHASV---HS 136
IGI+ G+ ST F+ K++ Y A + + P ++ + P F+A H
Sbjct: 5 IGILAGMGPKSTSPFIDKVIDYCQKLYGASNDIDYPHMMIYSCPTP----FYADRPIDHD 60
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
K + I GAV LE+ G I +PC+ +H ++ ++ + S+P LH+
Sbjct: 61 EMKKAI----IDGAVK---------LEKTGVDFIALPCNTAHVYYEEIQQALSVPMLHIV 107
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME-HV 255
E KE+ P A V VL T+ T+ + YQ+ L+ G EVV D +
Sbjct: 108 EETIKEI------PHPAKKAV---VLGTEPTIQSAIYQKVLKANGQEVVHKDHWQQAVNQ 158
Query: 256 IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPM 315
+I I+ NH ME ++ L + + + A + +I ++ VL + ID
Sbjct: 159 LIAAIKQPNH--MEHSKALWQTLYEEISQHA-DIIISACTDLNAVLDHTQSEI-PIIDSS 214
Query: 316 DALARSTVT 324
LA+STV+
Sbjct: 215 ACLAKSTVS 223
>gi|86151206|ref|ZP_01069421.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
260.94]
gi|315123688|ref|YP_004065692.1| aspartate racemase [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
gi|85841553|gb|EAQ58800.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
260.94]
gi|315017410|gb|ADT65503.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 230
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 34/172 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST+ + + + A+N++L + + +V
Sbjct: 3 TIGIIGGMSFESTITYYKTI------------------NQAINDKLKSLNSAKILLYSVN 44
Query: 144 LDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ I SQ+ + A LE AGA I++ + H ++ + +IP LH+
Sbjct: 45 FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIITTNTMHKVFDEIQQNINIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ AK LK+ ++ +IG+L T T++ FY++ L + V+ P
Sbjct: 105 VKSSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKMLIEENISVITP 148
>gi|229048455|ref|ZP_04194020.1| amino-acid racemase [Bacillus cereus AH676]
gi|228722885|gb|EEL74265.1| amino-acid racemase [Bacillus cereus AH676]
Length = 235
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 110/255 (43%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 13 IGILAGMGPKSTGPFVDTVVARCQTIYGAKYDMDFPHMMIYSCPTPFYMDRPID---HEA 69
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ SIP L++ +
Sbjct: 70 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQRSLSIPILNIVD 116
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHVI 256
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K TM + I
Sbjct: 117 ETLQSIPE---------NTKRVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQI 167
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I I++ ++E AR L + + L V+ VII ++ V +D +D
Sbjct: 168 ITYIKS---GEVEKARKLWS-ALVVQLKDEVDTVIIACTDLNVVASED------FVDSSQ 217
Query: 317 ALARSTVTWARSNKK 331
LA + V SN K
Sbjct: 218 CLANAVVRMYLSNTK 232
>gi|341820422|emb|CCC56694.1| aspartate racemase [Weissella thailandensis fsh4-2]
Length = 247
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 103/245 (42%), Gaps = 20/245 (8%)
Query: 85 IGIIGGVSVSSTLNFLGKL--VWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
GIIGG+ +T NF+ + + + KD + ++V N HAS+ +
Sbjct: 21 FGIIGGMGTVATENFVHTVNQLTETHKD-QNYLDYIVFN---------HASIPDRTAYI- 69
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
DH + L+ L G IVM C+ +H + ++ + P L + A
Sbjct: 70 -FDHTKPNPLPLLQSDVEKLNDIGVSFIVMTCNTAHYFRSELQKASKAPILSMPNIAASA 128
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
+ + K ++G++ATD T+SA YQ++L ++G + V+PD + V+ +
Sbjct: 129 CQTSTNK------DSKVGIMATDGTISAEIYQKELIDKGVQPVIPDAHHQQLVMSLIYDD 182
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARST 322
+ ++D ++ +I+G E+ K+ + ID + LA+
Sbjct: 183 IKNKDFVNREKYHQLITYFFQTLDCEYIILGCTELSVAQEKEPYPSEYIIDAQNELAKYV 242
Query: 323 VTWAR 327
V A
Sbjct: 243 VKHAE 247
>gi|374996712|ref|YP_004972211.1| aspartate racemase [Desulfosporosinus orientis DSM 765]
gi|357215078|gb|AET69696.1| aspartate racemase [Desulfosporosinus orientis DSM 765]
Length = 230
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 100/236 (42%), Gaps = 39/236 (16%)
Query: 84 TIGIIGGVSVSSTLNF---LGKLV------WYSAKDAEECPPFVVCNDPALNEELFHASV 134
TIG+IGG+S ST + L + + +YSAK C L++
Sbjct: 3 TIGVIGGMSWESTTTYYLELNRYINQKLGGYYSAK----CI-------------LYNVQY 45
Query: 135 HSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH 194
+K D R + L L+ +GA I++ + H + E +PFLH
Sbjct: 46 QDIKDVHKNGDWDRAG--EILVEAALSLKASGADFIILATNTMHIVAPRIKEAVDLPFLH 103
Query: 195 VGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME- 253
+ E A L + + +L T T+ FY++ L NQG V++P+K +E
Sbjct: 104 IAEVTADRLLRDNINT--------VALLGTRFTMEKDFYKKVLVNQGINVLIPEKDQIEK 155
Query: 254 -HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
H II E + R +R + I L R+ VI+G E+ ++ ++D +L
Sbjct: 156 IHEIINK-ELILGRVESSSRECFKNIILSLQKRSAQGVILGCTEIGLLIRQEDSVL 210
>gi|313893945|ref|ZP_07827511.1| aspartate racemase [Veillonella sp. oral taxon 158 str. F0412]
gi|313441509|gb|EFR59935.1| aspartate racemase [Veillonella sp. oral taxon 158 str. F0412]
Length = 222
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 11/147 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+AGA IV+ + H ++ IP LH+ E A EL+++ + ++G+
Sbjct: 62 LEKAGADYIVICTNTMHKVADEIERHIHIPLLHIAEMTAVELEKSGI--------TKVGL 113
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV--IIPTIEALNHRDMEGARNLLRIGI 279
L T T+ FY+ L+N+G VV+P++ +E V II L E + L I I
Sbjct: 114 LGTKYTMQQDFYKCILENRGIHVVIPNEDQVELVNDIIYNELCLGVISNESKQQYLDI-I 172
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDP 306
L+ V VI+G E+ ++ +DD
Sbjct: 173 DDLVKSGVQGVILGCTEIGLLVKQDDT 199
>gi|428205457|ref|YP_007089810.1| aspartate racemase [Chroococcidiopsis thermalis PCC 7203]
gi|428007378|gb|AFY85941.1| aspartate racemase [Chroococcidiopsis thermalis PCC 7203]
Length = 257
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 40/237 (16%)
Query: 84 TIGIIGGVSVSSTLNFLGKLV----------WYSAKDAEECPPFVVCNDPALNEELFHAS 133
TIGI+GG+S +T + +L+ W +A+ ++C+ N E F
Sbjct: 15 TIGILGGMSSQATAEYY-RLINAGINQVRGGWNAAE-------LLICSVNFANIEAF--- 63
Query: 134 VHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
+ Q D + L K LEQAGA IVM + H + IP +
Sbjct: 64 -----VRREQWDD----AANYLVDKALKLEQAGADFIVMATNTLHRVAPQIEAAIEIPLI 114
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
H+ + A E+++ + ++G+L T + A FY+++ + G E++ P +
Sbjct: 115 HIVDVTAAEIRQQGI--------TKVGILGTKPVMQADFYRDRFKLHGIELIAPSDRQCQ 166
Query: 254 HVIIPTIEALNHRDMEGARNLLRIGI-QLLLVRAVNAVIIGSDEMQGVL-PKDDPLL 308
+ + L HR ++ + I I Q L R +++G E+ ++ P+D P L
Sbjct: 167 IIDTIIFDELVHRSIQDESRQIYIEIMQDLGDRGAQVMVLGCTEISLLVEPEDFPDL 223
>gi|401682704|ref|ZP_10814594.1| aspartate racemase [Streptococcus sp. AS14]
gi|400183944|gb|EJO18191.1| aspartate racemase [Streptococcus sp. AS14]
Length = 230
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LEQAGA IV+ + H + E +IP LH+ + A+ L ++ ++G+
Sbjct: 71 LEQAGADFIVICTNTMHKVAPQIQEQITIPILHIAQATAQALLTDGIQ--------KVGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
L T T++ FY+EKL G EV++PD+A + V
Sbjct: 123 LGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEV 156
>gi|257459814|ref|ZP_05624920.1| aspartate racemase family protein [Campylobacter gracilis RM3268]
gi|257442666|gb|EEV17803.1| aspartate racemase family protein [Campylobacter gracilis RM3268]
Length = 230
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 99/233 (42%), Gaps = 39/233 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST+ + + + +NE L S + ++
Sbjct: 4 IGLIGGMSYESTITYYDGI------------------NRKINERLGGLSSGEILLSSLNF 45
Query: 145 DHIRGAVSQN---------LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
D I N RH R L+ GA I + + H + ++ S+PF+H+
Sbjct: 46 DEIERCQRDNEWGRAGEILARHARV-LQSGGADYIFLCTNTMHKCYEAINAAISVPFVHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ EL++ ++ ++G+L T T++ FY+++L + G EV++P+ ME V
Sbjct: 105 ADATLSELRKRGVQ--------KVGLLGTIYTMTQDFYKQRLIDGGVEVLVPNADEMEAV 156
Query: 256 IIPTIEALNHRDM--EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDP 306
+ L + L+I I+ L R VI+G E+ ++ + D
Sbjct: 157 NEIIFDELCFGKILPHSKEKFLQI-IEGLRARGAQGVILGCTEIGLLVSQADT 208
>gi|398797728|ref|ZP_10557047.1| aspartate racemase [Pantoea sp. GM01]
gi|398102275|gb|EJL92459.1| aspartate racemase [Pantoea sp. GM01]
Length = 229
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 11/147 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ GA IV+ + H +++ SIP LH+ + A+ +++A +K ++G+
Sbjct: 71 LEKGGADFIVLCTNTMHKVAQQITDAVSIPLLHIADATAQRIRQAGVK--------KVGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATME--HVIIPTIEALNHRDMEGARNLLRIGI 279
LAT T+ FY+ +L G EV++P+ A + H II L E +R R I
Sbjct: 123 LATAFTMEQEFYKGRLHRSGIEVLVPEAAERKVVHDIIYQELCLGVIRNE-SRARYREII 181
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDP 306
L+V+ A+I+G E+ ++ +D
Sbjct: 182 AGLVVQGAEAIILGCTEITLLVKPEDA 208
>gi|374674299|dbj|BAL52190.1| aspartate racemase [Lactococcus lactis subsp. lactis IO-1]
Length = 240
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 39/201 (19%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
N I+GG+ +T +F+ L + A ++ ++V N HA++
Sbjct: 3 NFFTILGGMGTLATESFIHTLNERTEAYRDQDYLNYIVVN---------HATIPD----- 48
Query: 142 VQLDHIRGAVSQNLRHKR----AFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG- 196
+ D+I+ +N K Q + V+PC+ +H + ++ + IP LH+
Sbjct: 49 -RTDYIKNPSLENPEEKLIDDIKIHSQLSPKFFVVPCNTAHYYFDEMQKATEIPILHMPR 107
Query: 197 ---ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
+ ++ +AK R+ VLAT+ T+ G Y+E L+ QG+E V+PD E
Sbjct: 108 IAVDSISHHFPKAK----------RVAVLATEGTILTGVYREALEEQGYEAVIPDDQLQE 157
Query: 254 HVIIPTIEALNHRDMEGARNL 274
V L +++++ RNL
Sbjct: 158 KV-----NRLIYQEVKENRNL 173
>gi|326318025|ref|YP_004235697.1| aspartate racemase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323374861|gb|ADX47130.1| aspartate racemase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 263
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 16/195 (8%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
T+GI+GG+ ++ +F ++ A A + D A E A V + +T
Sbjct: 15 RTVGILGGMGPAAGADF--ARLFVEACTARMQALGIAVRDQAYPEHWL-AQV-PVPDRTA 70
Query: 143 QLDHIRGAVSQ---NLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGC-SIPFLHVGEC 198
LD R Q L L GAR + + C+ +HAWH + E + LH+
Sbjct: 71 ALDDPRPGAHQPGDALLQATGRLAALGARAVAIACNTAHAWHRLLQERFPQLSVLHMPRE 130
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIP 258
VA L + R+G+LAT T +G Y+ L+ G + + PD+A E ++
Sbjct: 131 VAALLHAQGRR--------RVGLLATQGTYRSGLYRRALEQAGIDCLEPDEAGRERLMQG 182
Query: 259 TIEALNHRDMEGARN 273
E + DM AR
Sbjct: 183 IYEGVKAGDMALARQ 197
>gi|399088964|ref|ZP_10753679.1| aspartate racemase [Caulobacter sp. AP07]
gi|398030080|gb|EJL23513.1| aspartate racemase [Caulobacter sp. AP07]
Length = 236
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 76/147 (51%), Gaps = 14/147 (9%)
Query: 163 EQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVL 222
E+ GA +V+ + H + + ++P LH+ + A+ ++ A L R+G+L
Sbjct: 75 ERGGADFLVLCTNTMHRCAPAIEDAVAVPLLHIADPTAEAIRAAGLS--------RVGLL 126
Query: 223 ATDATLSAGFYQEKLQNQ-GFEVVLP---DKATMEHVIIPTIEALNHRDMEGARNLLRIG 278
T T+ FY+ +L+ + G EV++P D+A +I E + + ++ +R++ R
Sbjct: 127 GTAFTMEQDFYRGRLERRFGLEVLIPGPEDRAAAHGIIYR--ELVTGQVLDASRDVYRAV 184
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKDD 305
IQ L+ R VI+G E+ ++ ++D
Sbjct: 185 IQRLVARGAQGVILGCTEIMLLIGQED 211
>gi|239501409|ref|ZP_04660719.1| aspartate racemase [Acinetobacter baumannii AB900]
gi|421679711|ref|ZP_16119580.1| aspartate racemase [Acinetobacter baumannii OIFC111]
gi|445492075|ref|ZP_21460022.1| aspartate racemase [Acinetobacter baumannii AA-014]
gi|410390887|gb|EKP43267.1| aspartate racemase [Acinetobacter baumannii OIFC111]
gi|444763314|gb|ELW87650.1| aspartate racemase [Acinetobacter baumannii AA-014]
Length = 242
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 40/178 (22%)
Query: 84 TIGIIGGVSVSSTL-----------NFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST N LGKL +SAK ++ N E
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQNKLGKL--HSAK--------IILNSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ +L++K + + GA L + LE+AGA CI++ + H + + ++PF
Sbjct: 48 -IAALQAKGLWQE--AGAY---LAEQAQNLEKAGADCILVCTNTMHKVAPQIEDAITVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
+H+ + AKE+ ++ ++ +L T T+ FY+ +LQ++ EV++P+ A
Sbjct: 102 IHIADATAKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDREIEVIIPNDA 151
>gi|167773019|ref|ZP_02445072.1| hypothetical protein ANACOL_04408 [Anaerotruncus colihominis DSM
17241]
gi|167664952|gb|EDS09082.1| aspartate racemase [Anaerotruncus colihominis DSM 17241]
Length = 229
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 101/239 (42%), Gaps = 43/239 (17%)
Query: 83 NTIGIIGGVSVSSTLNF-----------LGKLVWYSAKDAEECPPFVVCNDPALNEELFH 131
TIG+IGG+S ST+ + LG L +SAK C ++C+ E F
Sbjct: 2 KTIGLIGGMSWESTVTYYQIINETVRKALGGL--HSAK----C---LLCSVDFHEIEAFQ 52
Query: 132 ASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
AS +S + D R L +AGA CIV+ + H G V SIP
Sbjct: 53 ASGAWEQSGELLADAAR------------TLARAGADCIVICTNTMHKVAGQVQAAVSIP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
+H+ + A L +A + +L T T++ FY+ +L ++G +V+ P+
Sbjct: 101 LIHIADATADTLTDAGIHT--------AALLGTKYTMTQDFYKARLTSRGIDVLTPEGRD 152
Query: 252 MEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
++ V II L E LRI I L R I+G E+ ++ + D L
Sbjct: 153 IDTVNRIIYDELCLGVISSESKHEYLRI-IDSLAARGAQGAILGCTEIGLLVGQADTGL 210
>gi|450106325|ref|ZP_21860449.1| putative amino acid recemase [Streptococcus mutans SF14]
gi|449223431|gb|EMC23120.1| putative amino acid recemase [Streptococcus mutans SF14]
Length = 229
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 38/183 (20%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLK---- 138
TIG+IGG+S ST ++ + + N+ + +EL +HS K
Sbjct: 2 KTIGLIGGMSWESTTSY-----------------YQLINET-IKKEL--GGLHSAKILLY 41
Query: 139 -SKTVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+++H + + ++ L LE+AGA IV+ + H + + +IP
Sbjct: 42 SVDFAEIEHYQASGDWAKSAEVLSQIAQKLEKAGADFIVICTNTMHKVAPQIQKQIAIPI 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
LH+ + A+ L E ++ ++G+L T T++ FY+EKL G EV++PD+A +
Sbjct: 102 LHIAQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQAGI 153
Query: 253 EHV 255
V
Sbjct: 154 TEV 156
>gi|229112217|ref|ZP_04241757.1| amino-acid racemase [Bacillus cereus Rock1-15]
gi|228671201|gb|EEL26505.1| amino-acid racemase [Bacillus cereus Rock1-15]
Length = 224
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 111/255 (43%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVARCQTIYGAKYDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ SIP L+
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQHSLSIPILN--- 102
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHVI 256
+ E +A K ++ R+ +LAT+AT+ AG YQ+ + + E + +K TM + I
Sbjct: 103 -IVDETLQAIPKNIK-----RVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQI 156
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I I++ ++E AR L + + L V+ VII ++ V +D +D
Sbjct: 157 ITYIKS---GEVEKARKLWS-ALVVQLKDEVDTVIIACTDLNVVASED------FVDSSQ 206
Query: 317 ALARSTVTWARSNKK 331
LA + V SN K
Sbjct: 207 CLANAVVRMYLSNTK 221
>gi|206969422|ref|ZP_03230376.1| aspartate racemase family protein [Bacillus cereus AH1134]
gi|206735110|gb|EDZ52278.1| aspartate racemase family protein [Bacillus cereus AH1134]
Length = 224
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 39/253 (15%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
IGI+ G+ ST F+ +V Y AK + P ++ + P F+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTP----FYID------ 51
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+ + + ++ A+ + + LE GA I MPC+ +H + ++ SIP L++ +
Sbjct: 52 RPIDYEAMKKAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQRSLSIPILNIVDET 107
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHVIIP 258
K + E + R+ +LAT+AT+ AG YQ+ + + E + +K TM + II
Sbjct: 108 LKAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQIIT 158
Query: 259 TIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDAL 318
I++ ++E A L + + L V+ II ++ V +D +D L
Sbjct: 159 YIKS---GEVEEAHKLWN-ALVVQLKDEVDTAIIACTDLNVVASED------FVDSSQCL 208
Query: 319 ARSTVTWARSNKK 331
A++ V SN K
Sbjct: 209 AKAVVRIYLSNTK 221
>gi|126642247|ref|YP_001085231.1| aspartate racemase [Acinetobacter baumannii ATCC 17978]
Length = 218
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+AGA CI++ + H + + ++PF+H+ + AKE+ ++ ++ +
Sbjct: 47 LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADATAKEILSQNIR--------KVAL 98
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKA 250
L T T+ FY+ +LQ+ G EV++P+ A
Sbjct: 99 LGTAFTMEQDFYKARLQDLGIEVIIPNDA 127
>gi|20808149|ref|NP_623320.1| aspartate racemase [Thermoanaerobacter tengcongensis MB4]
gi|254479423|ref|ZP_05092754.1| aspartate racemase subfamily protein [Carboxydibrachium pacificum
DSM 12653]
gi|20516738|gb|AAM24924.1| Aspartate racemase [Thermoanaerobacter tengcongensis MB4]
gi|214034647|gb|EEB75390.1| aspartate racemase subfamily protein [Carboxydibrachium pacificum
DSM 12653]
Length = 234
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 115/246 (46%), Gaps = 26/246 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AK-DAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
+GI+GG+ +T++ ++V ++ AK D E + CN P + + A ++ T
Sbjct: 8 VGILGGLGPMATVDLFRRIVEFTPAKVDQEHLRIIIDCN-PQIPDRT-KAILYGGPDPTP 65
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
+L A ++NL +AGA IV+PC+ +H + + IP +++ E A+
Sbjct: 66 ELI----ATAKNLV-------KAGADFIVIPCNTAHYFLDYLKREVDIPIINMIEETARY 114
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD-KATMEHVIIPTIE 261
++ +G+LAT T+ + Y + + G V+ D K TME + E
Sbjct: 115 VRN------NYPYAECVGLLATSGTIKSNLYHKAFKKFGISVLAGDEKKTMEAIY--GEE 166
Query: 262 ALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALAR 320
+ ++ E R LL+ Q L+ R +I G E+ VL ++D L +DP+ LA+
Sbjct: 167 GIKAGNLGEKPRRLLKEAAQELIRRGAQVIIAGCTEISLVLGEEDVSL-PLVDPLTILAK 225
Query: 321 STVTWA 326
V A
Sbjct: 226 VAVELA 231
>gi|390434540|ref|ZP_10223078.1| aspartate/glutamate racemase [Pantoea agglomerans IG1]
Length = 230
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+AGA+ I++ + H +S IP LH+ + + +++A ++ +IG+
Sbjct: 71 LERAGAQFIILCTNTMHKVAAQISAATGIPLLHIADATGRRIQQAGVR--------KIGL 122
Query: 222 LATDATLSAGFYQEKLQNQ-GFEVVLPDKA--TMEHVIIPTIEALNHRDMEGARNLLRIG 278
LAT T+ FY+ +LQ Q G EV+ PD+ H +I L + R I
Sbjct: 123 LATRFTMEQDFYRGRLQQQFGLEVITPDREDRIFVHEVIYHELCLGEINPASRRRYGEI- 181
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKDDP 306
+Q L+ + A+I+G E+ ++ D
Sbjct: 182 MQQLVAQGAEAIILGCTEITLLVDATDA 209
>gi|450028756|ref|ZP_21832379.1| putative amino acid recemase [Streptococcus mutans G123]
gi|449195315|gb|EMB96645.1| putative amino acid recemase [Streptococcus mutans G123]
Length = 230
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 38/182 (20%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLK----- 138
TIG+IGG+S ST ++ F+ + + +EL +HS K
Sbjct: 3 TIGLIGGMSWESTTSYY---------------QFI---NETIKKEL--GGLHSAKILLYS 42
Query: 139 SKTVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
+++H + + ++ L LE+AGA IV+ + H + + +IP L
Sbjct: 43 VDFAEIEHYQASGDWAKSAEVLSQIAQKLEKAGADFIVICTNTMHKVAPQIQKQIAIPIL 102
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
H+ + A+ L E ++ ++G+L T T++ FY+EKL G EV++PD+A +
Sbjct: 103 HIAQATAETLLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQAGIT 154
Query: 254 HV 255
V
Sbjct: 155 EV 156
>gi|423417329|ref|ZP_17394418.1| aspartate racemase [Bacillus cereus BAG3X2-1]
gi|401108057|gb|EJQ15990.1| aspartate racemase [Bacillus cereus BAG3X2-1]
Length = 224
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPA---LNEELFHASVHS 136
IGI+ G+ ST F+ +V Y AK + P ++ + P ++ + HA++
Sbjct: 2 IGILAGMGPKSTGPFVDTVVARCQTIYGAKHDMDFPHMMIYSCPTPFYMDRSIDHAAM-- 59
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
K + I GA LE G I MPC+ +H + ++ +IP L++
Sbjct: 60 --KKAI----IEGAQK---------LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIV 104
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
+ + + E + R+ +LAT+AT+ AG YQ+++ + E + ++ + +I
Sbjct: 105 DETLQAIPE---------TAKRVALLATEATVQAGIYQDEIIKRNIEYIHNEQ--WQEMI 153
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I + ++E AR L + + L L V+ II ++ V+ +D +D
Sbjct: 154 NQIITCIKGGEIEEARKLWSVLV-LQLKDEVDTAIIACTDLNVVVSED------FVDSSQ 206
Query: 317 ALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 207 CLAKAVVRMYVSNIK 221
>gi|378582435|ref|ZP_09831074.1| amino acid racemase [Pantoea stewartii subsp. stewartii DC283]
gi|377815172|gb|EHT98288.1| amino acid racemase [Pantoea stewartii subsp. stewartii DC283]
Length = 236
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 10/101 (9%)
Query: 149 GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCS-IPFLHVGECVAKELKEAK 207
A+S LR + L +AG I +PC+++H + ++ E + IP LH+ +C + L
Sbjct: 60 AAMSAALRDGISDLVKAGVNLIAVPCNVAHCYFAEMQEASAGIPVLHIADCALEHL---- 115
Query: 208 LKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
P E + I V+AT +TL AGFYQ++L G V D
Sbjct: 116 --PAETEN---IAVIATASTLDAGFYQQRLHIAGKRCVSSD 151
>gi|270490118|ref|ZP_06207192.1| aspartate racemase [Yersinia pestis KIM D27]
gi|270338622|gb|EFA49399.1| aspartate racemase [Yersinia pestis KIM D27]
Length = 232
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L+ AGA IV+ + H D+ C +P LH+ + A ++K+ + +IG+
Sbjct: 72 LKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADATAVQIKQQGID--------KIGL 123
Query: 222 LATDATLSAGFYQEKL-QNQGFEVVLPDKATMEHVIIPTIEALNHRDM-EGARNLLRIGI 279
L T T+ GFY+ +L + G EV+ PD E V E L + E +R+ R I
Sbjct: 124 LGTRYTMEQGFYRGRLTEKHGIEVITPDDTDREAVNRIIYEELCLGIISETSRDAYRRVI 183
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDP 314
+ L + V + +G + + L + P +C+ P
Sbjct: 184 KKLEAQGVQGIFLGVPKSRYWLTRKMPQY-RCLIP 217
>gi|365845118|ref|ZP_09385914.1| aspartate racemase [Flavonifractor plautii ATCC 29863]
gi|364561837|gb|EHM39714.1| aspartate racemase [Flavonifractor plautii ATCC 29863]
Length = 234
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 104/241 (43%), Gaps = 22/241 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GI+GG+ +T +F +++ + A +E P ++ +D ++ + ++ +
Sbjct: 6 LGILGGMGPQATQDFYQRILDRTDASCDQEHLPTLIWSDTSMPD----------RTAAIL 55
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
G + L R LE+ G + +PC+ SH + + +IP +H +
Sbjct: 56 GGDAEGCYRRLLDGAR-LLERGGCTALAIPCNTSHYFADRLQGDIAIPLIH--------M 106
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ L A R G+LATD T+ G YQ + +G E V P A ++ +++ I
Sbjct: 107 PRETVGVLAADGKKRAGILATDGTVQTGIYQRECAARGMEGVTP-PADVQKLVMSIIYDE 165
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTV 323
R +G+R + L +A I+G E+ V L +D M+ LA +
Sbjct: 166 IKRGEKGSREKFAAIDRWLRASGCDAAILGCTELS-VYRTYHGLPDYYLDAMEILAERCI 224
Query: 324 T 324
T
Sbjct: 225 T 225
>gi|346983359|emb|CCD10846.1| RacX protein [Bacillus subtilis]
Length = 227
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 113/258 (43%), Gaps = 57/258 (22%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPALNEELFHASV---HS 136
IGI+ G+ ST F+ K++ Y A + + P ++ + P F+A H
Sbjct: 2 IGILAGMGPKSTSPFIDKVIDYCQKLYGASNDIDYPHMMIYSCPTP----FYADRPIDHD 57
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
K + I GAV LE+ G I +PC+ +H ++ ++ + S+P LH+
Sbjct: 58 EMKKAI----IDGAVK---------LEKTGVDFIALPCNTAHVYYEEIQQALSVPMLHIV 104
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHV 255
E KE+ P A V VL T+ T+ + YQ+ L+ G EVV D + +
Sbjct: 105 EETIKEI------PHPAKKAV---VLGTEPTIQSAIYQKVLKANGQEVVHKDHWQQVVNQ 155
Query: 256 IIPTIEALNHRDMEGARNLLRIGIQLLLVRA---------VNAVIIGSDEMQGVLPKDDP 306
+I I+ NH ME + L + + + A +NAV+ D +Q +P
Sbjct: 156 LIAAIKQPNH--MEHTQALWQTLYEEISQHADIIISACTDLNAVL---DHIQSEIP---- 206
Query: 307 LLKKCIDPMDALARSTVT 324
ID LA+STV+
Sbjct: 207 ----IIDSSACLAKSTVS 220
>gi|449937117|ref|ZP_21804384.1| putative amino acid recemase [Streptococcus mutans 2ST1]
gi|450155368|ref|ZP_21878217.1| putative amino acid recemase [Streptococcus mutans 21]
gi|449164800|gb|EMB67841.1| putative amino acid recemase [Streptococcus mutans 2ST1]
gi|449237245|gb|EMC36116.1| putative amino acid recemase [Streptococcus mutans 21]
Length = 230
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 38/182 (20%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLK----- 138
TIG+IGG+S ST ++ F+ + + +EL +HS K
Sbjct: 3 TIGLIGGMSWESTTSYY---------------QFI---NETIKKEL--GGLHSAKILLYS 42
Query: 139 SKTVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
+++H + + ++ L LE+AGA IV+ + H + + +IP L
Sbjct: 43 VDFAEIEHYQASGDWAKSAEVLSQIAQKLEKAGADFIVICTNTMHKVAPQIQKQIAIPIL 102
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
H+ + A+ L E ++ ++G+L T T++ FY+EKL G EV++PD+A +
Sbjct: 103 HIAQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQAGIT 154
Query: 254 HV 255
V
Sbjct: 155 EV 156
>gi|399024311|ref|ZP_10726353.1| aspartate racemase [Chryseobacterium sp. CF314]
gi|398080711|gb|EJL71510.1| aspartate racemase [Chryseobacterium sp. CF314]
Length = 226
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 104/229 (45%), Gaps = 36/229 (15%)
Query: 85 IGIIGGVSVSSTLNFL-----GKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
IG++GG+S STL++ G ++ EC ++ + ++S
Sbjct: 4 IGLVGGISWVSTLDYYKFINEGVNARLGGLNSAECI-------------IYSLNFGDVQS 50
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
K+ +H G + + L+++GA IV+ + +H + + E +P +H+G
Sbjct: 51 KS--WEHSFGLLLNACEN----LKKSGADGIVLCANTAHLFADQLQETIKLPIIHIGAET 104
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
AK + + K ++G+L T T+ FY+ KL+ EV++P+K I T
Sbjct: 105 AKAINKEGYK--------KVGLLGTKFTMEMDFYKNKLEEYNLEVLIPEKQETRDYIQYT 156
Query: 260 IE---ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
++ + + + E N + I + L+ + +I+G E+ ++ +DD
Sbjct: 157 VKEELGIGYINPETKTNYISI-VNDLINQGAECIILGCTEIPMLISQDD 204
>gi|421189734|ref|ZP_15647048.1| aspartate racemase [Oenococcus oeni AWRIB422]
gi|399972824|gb|EJO07023.1| aspartate racemase [Oenococcus oeni AWRIB422]
Length = 233
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 106/244 (43%), Gaps = 16/244 (6%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
GI+GG+ +T NF+ L + +++ LN +F+ + ++ +
Sbjct: 5 FGILGGMGTMATENFVRTLDRLTEAHSDQ---------NFLNYLVFNHACIPDRTAYI-F 54
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
D + L+ L A +V+ C+ +H + +++ +P L++ + K
Sbjct: 55 DRTKDNPLSFLKEDIQQLNSLSADFVVITCNTAHYFLPELTAIAKMPILNMPSLAVQACK 114
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALN 264
+ ++I +LATD +++G YQEK+ Q + ++PDK V+ + +
Sbjct: 115 K------RTAGTLKISILATDGIIASGLYQEKISAQSDQAIIPDKELQIQVMKFIYQDIK 168
Query: 265 HRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVT 324
+ A + +LL+ + + VI+G E ++ + + ID LA + V+
Sbjct: 169 QNNRIEADKYHHLVEKLLIKQKCDYVILGCTEFSVAQEREPYISDRVIDAQQVLANTAVS 228
Query: 325 WARS 328
A++
Sbjct: 229 MAKN 232
>gi|398824705|ref|ZP_10583026.1| aspartate racemase [Bradyrhizobium sp. YR681]
gi|398224572|gb|EJN10873.1| aspartate racemase [Bradyrhizobium sp. YR681]
Length = 229
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 26/168 (15%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDA----EECPPFVVCNDPALNEELFHASVHSLKS 139
TIG+IGG+S ST + KL+ +D P + D +E+ +A
Sbjct: 3 TIGLIGGMSWESTALYY-KLINERVRDRMGKLHSAPLLMYSYDFQAIKEMQYAG------ 55
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+ D +++ R LE AGAR IV+ + H +++ +IPF+H+G+
Sbjct: 56 ---RWDEAAASLADVARR----LENAGARAIVLCTNTMHKLAPEIAANVTIPFIHIGDAT 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
A+ ++ + R+G+L T T+ FY ++L+ +V++P
Sbjct: 109 AERIRSKGYR--------RVGLLGTKFTMEEDFYIDRLRAHDLDVLVP 148
>gi|345888687|ref|ZP_08839749.1| hypothetical protein HMPREF0178_02523 [Bilophila sp. 4_1_30]
gi|345040420|gb|EGW44680.1| hypothetical protein HMPREF0178_02523 [Bilophila sp. 4_1_30]
Length = 250
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 117/263 (44%), Gaps = 40/263 (15%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAE-ECPPFVVCNDPALNEELFHASVHSL 137
+ Q IGI+GGV + L+ KL ++ +A+ E P ++ + P + L
Sbjct: 1 MRQDERIGIVGGVGPHAGLDLTRKLFDHTRAEADQEHLPVMLYSFP----DRIGERPAFL 56
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISH-------AWHGDVSEGCSI 190
KT D+ A+ + A L +AGA I MPC+ +H A + G +
Sbjct: 57 LGKTA--DNPGEAIGDIM----AELARAGATVIGMPCNTAHSPRILDAALEKLKATGRPV 110
Query: 191 PFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVV--LPD 248
F+H+ + V + +++ G G R+G+L+T ATL YQ+ L+ G + PD
Sbjct: 111 RFVHMIDAVVRHVRQ------RCGEGARVGILSTLATLETRLYQDSLERAGLVALHPAPD 164
Query: 249 KATMEHVIIPTIEALNHRDME-GARNLL--RIGIQLL-----LVRAVNAVIIGSDEMQGV 300
T EA+++R+ ARN + R LL L +A+I+G E+
Sbjct: 165 GCTRVQ------EAISNREYGIKARNPVTERARADLLDEARRLAGNADAIILGCTEIPLA 218
Query: 301 LPKDDPLLKKCIDPMDALARSTV 323
LP+ + ID D LAR V
Sbjct: 219 LPEKELGGIPLIDATDILARELV 241
>gi|431756877|ref|ZP_19545509.1| aspartate racemase [Enterococcus faecium E3083]
gi|430620731|gb|ELB57533.1| aspartate racemase [Enterococcus faecium E3083]
Length = 243
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 170 IVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLS 229
IV+ C+ +H + ++ IP LH+ A EL + + ++ +L T+ ++
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL-------VRQHTTGKVAILGTEGSMK 132
Query: 230 AGFYQEKLQNQGFEVVLPDKATME---HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRA 286
AG Y+ +++N GFE V+PD A E ++I I+ +H + E +L ++ L
Sbjct: 133 AGIYEREVKNLGFETVIPDTALQEKINYLIYHEIKESDHLNQELYYEILEEAVERL---N 189
Query: 287 VNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNKKLTL 334
VI+G E+ + + ID LA T+ A + + L
Sbjct: 190 CEKVILGCTELSLMHEFAEDNHYPVIDAQSILADRTIERALAERNEAL 237
>gi|423368774|ref|ZP_17346206.1| aspartate racemase [Bacillus cereus VD142]
gi|401079714|gb|EJP88009.1| aspartate racemase [Bacillus cereus VD142]
Length = 224
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPA---LNEELFHASVHS 136
IGI+ G+ ST F+ +V Y AK + P ++ + P ++ + HA++
Sbjct: 2 IGILAGMGPKSTGPFVDTVVARCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHAAM-- 59
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
K + I GA +R LE G I MPC+ +H + ++ +IP L++
Sbjct: 60 --KKAI----IEGA-------QR--LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIV 104
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
+ K + E + R+ +LAT+AT+ AG YQ+ + + E + ++ + +I
Sbjct: 105 DETLKAIPE---------NTKRVALLATEATVQAGIYQDGITKRNIEYIHNEQ--WQEMI 153
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I + ++E AR L + + L L V+ II ++ V+ +D +D
Sbjct: 154 NQIITCIKGGEIEEARKLWSLLV-LQLKDEVDTAIIACTDLNVVVSED------FVDSAQ 206
Query: 317 ALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 207 CLAKAVVRTYASNIK 221
>gi|383815508|ref|ZP_09970920.1| putative aspartate/glutamate racemase [Serratia sp. M24T3]
gi|383295746|gb|EIC84068.1| putative aspartate/glutamate racemase [Serratia sp. M24T3]
Length = 230
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 43/237 (18%)
Query: 83 NTIGIIGGVSVSSTLNF-----------LGKLVWYSAKDAEECPPFVVCNDPALNEELFH 131
T+G+IGG+S ST+ + LG L +SAK V+ + E
Sbjct: 2 KTLGLIGGMSWESTVPYYRTINEQIKQALGGL--HSAK-------MVIYSVDFYEIEQLQ 52
Query: 132 ASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
A + Q I G +Q+LR +AGA IV+ + H + +P
Sbjct: 53 A-----RGDWEQAGQILGEAAQSLR-------KAGAEIIVVCTNTMHKVADAIERIGGLP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ + + +++ + RIG+L T T+ FY+ +L+ QG EV+ P++A
Sbjct: 101 LLHIADATGQAIQQQNIG--------RIGLLGTRFTMEQTFYRGRLEAQGIEVLTPNEAD 152
Query: 252 ME--HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDP 306
E H II E + ++G+R R IQ L + +I+G E+ ++ + D
Sbjct: 153 REIIHRIIYE-ELCLGKILDGSREEYRRIIQSLEQQGAQGIILGCTEITLLIGQQDA 208
>gi|126650720|ref|ZP_01722936.1| aspartate racemase [Bacillus sp. B14905]
gi|126592385|gb|EAZ86403.1| aspartate racemase [Bacillus sp. B14905]
Length = 232
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LEQAGA IV+ + H + E +IP LH+ + A ++KEA L+ +I +
Sbjct: 71 LEQAGADFIVICTNTMHKVVAVIEEAITIPILHIADATANQIKEAGLQ--------KIAL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPD 248
L T T+ FY+ +++ G EV++PD
Sbjct: 123 LGTMYTMEQEFYKSRVEGYGIEVIVPD 149
>gi|397648851|ref|YP_006489378.1| amino acid recemase [Streptococcus mutans GS-5]
gi|392602420|gb|AFM80584.1| putative amino acid recemase [Streptococcus mutans GS-5]
Length = 229
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 50/189 (26%)
Query: 83 NTIGIIGGVSVSSTLNF-----------LG-----KLVWYSAKDAEECPPFVVCNDPALN 126
TIG+IGG+S ST ++ LG K++ YS D E + D A +
Sbjct: 2 KTIGLIGGMSWESTTSYYQLINETIKKELGGLHSAKILLYSV-DFAEIEHYQASGDWAKS 60
Query: 127 EELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSE 186
E+ ++Q L E+AGA IV+ + H + +
Sbjct: 61 AEVL------------------SQIAQKL-------EKAGADFIVICTNTMHKVAPQIQK 95
Query: 187 GCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVL 246
+IP LH+ + A+ L E ++ ++G+L T T++ FY+EKL G EV++
Sbjct: 96 QIAIPILHITQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLI 147
Query: 247 PDKATMEHV 255
PD+A + V
Sbjct: 148 PDQAGITEV 156
>gi|365858670|ref|ZP_09398589.1| aspartate racemase [Acetobacteraceae bacterium AT-5844]
gi|363713797|gb|EHL97369.1| aspartate racemase [Acetobacteraceae bacterium AT-5844]
Length = 232
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 15/151 (9%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ GA +V+ + H V IP LH+ + A+ +K A L R+G+
Sbjct: 71 LERGGADVVVICTNTMHRMADAVQAAIGIPVLHIADPTAERIKGAGLG--------RVGL 122
Query: 222 LATDATLSAGFYQEKL-QNQGFEVVLP---DKATMEHVIIPTIEALNHRDMEGARNLLRI 277
L T T+ FY+ +L G EV++P D+AT+ +I E + R +R R
Sbjct: 123 LGTAFTMEQDFYKGRLVARHGLEVLVPEEADRATVHRIIYD--ELVQGRVEPASRAAYRE 180
Query: 278 GIQLLLVRAVNAVIIGSDE-MQGVLPKDDPL 307
I L+ R AVI+G E M V P+D P+
Sbjct: 181 IIARLVDRGAEAVILGCTEIMLLVKPEDSPV 211
>gi|319765055|ref|YP_004128992.1| aspartate racemase [Alicycliphilus denitrificans BC]
gi|317119616|gb|ADV02105.1| aspartate racemase [Alicycliphilus denitrificans BC]
Length = 246
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 104/249 (41%), Gaps = 28/249 (11%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
+T+GI+ G+ ++ ++F V C ++ + A+ ++ + A H + +
Sbjct: 8 HTVGILAGMGPAAGVDFARLFV-------AACEDWLRSHGHAVCDQAYPA--HWMAQLPI 58
Query: 143 QLDHIR----GAVSQNLRHKRAFLEQA---GARCIVMPCHISHAWHGDVSEGC-SIPFLH 194
D R GA Q L L Q GAR + MPC+ +HAWH + E + LH
Sbjct: 59 P-DRTRALADGAAPQPLEAMAQGLAQLAGLGARAVAMPCNTAHAWHAALQERVPQVELLH 117
Query: 195 VGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEH 254
+ A L+ A R+ +LAT+ + G Y++ QG VLPD +
Sbjct: 118 MPRETAAALR--------AQGQERVALLATEGSYRIGLYEQAFAAQGIACVLPDAKARQW 169
Query: 255 VIIPTIEALNHRDMEGARN-LLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-KCI 312
++ + + DM A+ + +G L A+ + E+ LP+ I
Sbjct: 170 LMQGIYDGVKAGDMALAQQRFVAVGQALRAQHGGIALAMACTEIPLALPQAPEAQDWALI 229
Query: 313 DPMDALARS 321
DP LAR+
Sbjct: 230 DPTAILARA 238
>gi|423650650|ref|ZP_17626220.1| aspartate racemase [Bacillus cereus VD169]
gi|401281321|gb|EJR87233.1| aspartate racemase [Bacillus cereus VD169]
Length = 224
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVARCQTIYGAKYDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ + SIP LH+ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQDSLSIPILHIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ + E + R+ +LAT+AT+ A YQ+ + + E + T + +I
Sbjct: 106 ETLQAIPE---------TAKRVALLATEATVQADIYQDGIAKRNIEYI--HHETWQEMIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E A L + L L V+ II ++ V +D +D
Sbjct: 155 QIITCIKSGEIEKAHELWN-ALVLQLREEVDTAIIACTDLNVVASED------FVDSSQC 207
Query: 318 LARSTVTWARSNKK 331
LA + V SN K
Sbjct: 208 LANAVVRMYLSNTK 221
>gi|315230222|ref|YP_004070658.1| aspartate racemase [Thermococcus barophilus MP]
gi|315183250|gb|ADT83435.1| aspartate racemase [Thermococcus barophilus MP]
Length = 226
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 25/223 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IGIIGG+S STL + K + S + E P EL S++ + K
Sbjct: 4 IGIIGGMSPESTLYYYKKFIEISREKFE----------PYFYPELIIYSINFREFK---- 49
Query: 145 DHIRGAVSQN--LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
D+ G + L + LE+AGA I + + SH DV ++ + + + VA+E
Sbjct: 50 DNPEGWEGRKKILINAAKALERAGAEVIGISANTSHIVFPDVQRAVNVEMVSIIDAVAEE 109
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
K L+ L L T T++ FY+E L+ +GF+V++P + +E + E
Sbjct: 110 AKRRGLRKLLL--------LGTKTTMTMSFYKEALKEKGFDVIVPSENEIEEINRIIFEE 161
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQ-GVLPKD 304
L ++ L+ + + + R + VI+G E+ + P+D
Sbjct: 162 LMFENLNSKLWLIELIERYVERREIEGVILGCTELPLAIKPED 204
>gi|372274399|ref|ZP_09510435.1| putative aspartate/glutamate racemase [Pantoea sp. SL1_M5]
Length = 230
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+AGA+ IV+ + H +S IP LH+ + + +++A ++ ++G+
Sbjct: 71 LERAGAQFIVLCTNTMHKVAAQISAATGIPLLHIADATGRRIQQAGVR--------KVGL 122
Query: 222 LATDATLSAGFYQEKLQNQ-GFEVVLPDKA--TMEHVIIPTIEALNHRDMEGARNLLRIG 278
LAT T+ FY+ +LQ Q G EV+ PD+ H +I L + R I
Sbjct: 123 LATRFTMEQDFYRGRLQQQFGLEVITPDREDRIFVHDVIYHELCLGEINPASRRRYGEI- 181
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKDDP 306
+Q L+ + A+I+G E+ ++ D
Sbjct: 182 MQQLVAQGAEAIILGCTEITLLVDATDA 209
>gi|407069027|ref|ZP_11099865.1| aspartate racemase [Vibrio cyclitrophicus ZF14]
Length = 231
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 117/245 (47%), Gaps = 29/245 (11%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIG++GG+S ST+++ + S + V N LN ++S+ ++
Sbjct: 3 TIGLLGGMSWESTMSY-----YKSINEG------VKANLGGLNSA--KICMYSVNFDEIE 49
Query: 144 -LDHI-RGAVSQNLRHKRAF-LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
L H R + + N+ A +E+ GA I++ + H ++ E +IP LH+ + A
Sbjct: 50 RLQHQGRWSETANILSDAALSVEKGGADFILICTNTMHKVVPEIEEKITIPILHIADTTA 109
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPT 259
+ L E +K ++G+L T T+ FY+ +L N+ G VV+PD++ E V
Sbjct: 110 QILLEQGVK--------KVGLLGTAFTMEQDFYKARLVNKFGIGVVIPDESDREQVHNII 161
Query: 260 IEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK---DDPLLKKCIDPM 315
+ L ++ E +R++ R I+ L + AVI+G E+ ++ + D PLL
Sbjct: 162 YQELCRGEVKEESRDVYRQIIEKLSQQGAEAVILGCTEIALLIQQQHTDVPLLDTTSVHA 221
Query: 316 DALAR 320
DA R
Sbjct: 222 DAAVR 226
>gi|423557672|ref|ZP_17533974.1| aspartate racemase [Bacillus cereus MC67]
gi|401192682|gb|EJQ99694.1| aspartate racemase [Bacillus cereus MC67]
Length = 224
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 18/170 (10%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE G I MPC+ +H + ++ SIP L++ V + LKE G+ R+ +
Sbjct: 70 LESTGVDFIAMPCNTAHLYFEELQHSISIPILNI---VVETLKEIP------GTAKRVAL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQL 281
LAT+AT+ AG YQ+ + + E + +K + +I I + ++E A L + L
Sbjct: 121 LATEATVQAGIYQDGIAQRNIEYIHNEK--WQEMINQIITCIKGGEVEEAHKLWS-ALVL 177
Query: 282 LLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNKK 331
L V+ II ++ V +D +D +LA + V SN K
Sbjct: 178 QLKDEVDTAIIACTDLNVVANED------FVDSSQSLAEAVVRMYLSNTK 221
>gi|330827247|ref|YP_004390550.1| aspartate racemase [Alicycliphilus denitrificans K601]
gi|329312619|gb|AEB87034.1| aspartate racemase [Alicycliphilus denitrificans K601]
Length = 246
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 105/249 (42%), Gaps = 28/249 (11%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
+T+GI+ G+ ++ ++F V C ++ + A+ ++ + A H + +
Sbjct: 8 HTVGILAGMGPAAGVDFARLFV-------AACEDWLRSHGHAVCDQAYPA--HWMAQLPI 58
Query: 143 QLDHIR----GAVSQNLRHKRAFLEQA---GARCIVMPCHISHAWHGDVSEGC-SIPFLH 194
D R GA Q L L Q GAR + MPC+ +HAWH + E + LH
Sbjct: 59 P-DRTRALADGAAPQPLEAMAQGLAQLAGLGARAVAMPCNTAHAWHAALQERVPQVELLH 117
Query: 195 VGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEH 254
+ A L+ A R+ +LAT+ + G Y++ QG VLPD +
Sbjct: 118 MPRETAAALR--------AQGQERVALLATEGSYRIGLYEQAFAAQGIACVLPDAKARQW 169
Query: 255 VIIPTIEALNHRDMEGARN-LLRIGIQLLLVRAVNAVIIGSDEMQGVLPK-DDPLLKKCI 312
++ + + DM A+ + +G L A+ + E+ LP+ + I
Sbjct: 170 LMQGIYDGVKAGDMALAQQRFVAVGQALRAQHGDIALAMACTEIPLALPQAPEAQGWTLI 229
Query: 313 DPMDALARS 321
DP LAR+
Sbjct: 230 DPTAILARA 238
>gi|403236695|ref|ZP_10915281.1| aspartate racemase [Bacillus sp. 10403023]
Length = 235
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 82/174 (47%), Gaps = 20/174 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSA--KDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
+G+IGG+ +T F K+V + KD + + LN +++ + T
Sbjct: 6 LGVIGGMGPKATSVFFDKIVNKTEAHKDQDHLNMVI------LNHTTLPDRTNAILTNTG 59
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
+ AV + + LE AG I +PC+ SH ++ ++ + IP +++ E KE
Sbjct: 60 ET--FLDAVKNDFK----LLEAAGVSNIAIPCNTSHYFYEELQKLTKIPIINMVEETIKE 113
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
+ + G +IG+LAT+ T+ +G Y + + E+++P+ + E V+
Sbjct: 114 IHDM------YGDDTKIGILATNGTIRSGIYADVCKKYKLELLVPNDSLQEKVM 161
>gi|334128319|ref|ZP_08502212.1| aspartate racemase [Centipeda periodontii DSM 2778]
gi|333387740|gb|EGK58933.1| aspartate racemase [Centipeda periodontii DSM 2778]
Length = 255
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 40/183 (21%)
Query: 84 TIGIIGGVSVSSTLNF-----------LGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG+IGG+S ST+ + LG L +SAK C + V D E + A
Sbjct: 28 TIGLIGGMSWESTVTYYQVINETIKKQLGGL--HSAK----CILYSVDFDEI---EKYQA 78
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
S KS V L LE+AGA IV+ + H ++ IP
Sbjct: 79 SGEWDKSADV------------LSEAAQALERAGADYIVICTNTMHKVASEIGRNIHIPI 126
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
LH+ + A +LK+ ++ ++G+L T T+ FY+ L QG EV++P+ A +
Sbjct: 127 LHIADMTAVQLKKHGIR--------KVGLLGTKYTMQQDFYKNILIEQGIEVLIPNDADV 178
Query: 253 EHV 255
+ V
Sbjct: 179 DVV 181
>gi|418591|sp|P32968.1|YPNL_PECCC RecName: Full=Uncharacterized protein in pnlA 3'region
Length = 150
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 14/149 (9%)
Query: 180 WHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQN 239
W D+ + C + + + + +K A + R+G+LAT AT+ A YQ+ L
Sbjct: 1 WFNDLKQQCRAEMISIIDVTCQAIKHA--------NTTRVGLLATTATVKARIYQDNLIT 52
Query: 240 QGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQG 299
+ PD A +H ++ +I A D+ GA +LL LL V +I+G E+
Sbjct: 53 DNIDCYTPDDAD-QHQVMESIYAYKSGDIAGAYSLLSPVKDRLLQAGVEKIILGCTELPL 111
Query: 300 VLPKD---DPLLKKCIDPMDALARSTVTW 325
+L ++ P + +D + L + TV W
Sbjct: 112 ILEQEVRTSP--QHYVDATEELIKKTVEW 138
>gi|332157981|ref|YP_004423260.1| aspartate racemase [Pyrococcus sp. NA2]
gi|331033444|gb|AEC51256.1| aspartate racemase [Pyrococcus sp. NA2]
Length = 226
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEE--CPPFVVCNDPALNEELFHASVHSLKSKTV 142
IGIIGG++ STL + K + S + E+ P ++ ++N F + + +
Sbjct: 4 IGIIGGMTPESTLYYYQKYIEISREKFEKYTYPELIIY---SINFREFFQNPDGWEGRKK 60
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
L + A LE+AGA I M + H DV + ++P + + + VA+
Sbjct: 61 ILINAAKA-----------LERAGADIIAMSANTPHMVFDDVQKEVNVPMVSIIDAVAEN 109
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
+K +K ++ +L T T+S+ FY L+ +G EVV+P+ E + E
Sbjct: 110 VKRRGVK--------KVLLLGTKTTMSSDFYINALKERGLEVVVPNDEEKEELNRIIFEE 161
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
L + + ++ + + + + VI+G E+ + + D
Sbjct: 162 LAFHNFKNRGWIIELIKKYIEKEKIEGVILGCTELPLAIKQGD 204
>gi|226314088|ref|YP_002773984.1| hypothetical protein BBR47_45030 [Brevibacillus brevis NBRC 100599]
gi|226097038|dbj|BAH45480.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 230
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 102/238 (42%), Gaps = 46/238 (19%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+L V+Y + N+ + E L +HS KS
Sbjct: 2 KTIGLIGGMSWESSL------VYYR-----------LINET-VKERL--GGLHSAKSILY 41
Query: 143 QLDHIRGAVSQNLRHKR------------AFLEQAGARCIVMPCHISHAWHGDVSEGCSI 190
+D + + R R LE AGA IV+ + H + E S+
Sbjct: 42 SVDF--AEIEEMQREGRWEEAGERMALAAKSLEAAGADLIVLCTNTMHKLAYAIEEATSL 99
Query: 191 PFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQN-QGFEVVLPDK 249
PFLH+ + A+ + K R+ +LAT T+ FY +L++ G EV+LPD+
Sbjct: 100 PFLHIADATAQAITNHGHK--------RVALLATRFTMEQDFYTGRLRDVHGLEVLLPDE 151
Query: 250 A--TMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
T+ H II + E RN I I+ L+ AVI+G E+ ++ D
Sbjct: 152 QERTLVHEIIYNELCVGIIREESKRNYQAI-IERLVKEGAEAVILGCTEIGLLITAQD 208
>gi|30022823|ref|NP_834454.1| aspartate racemase [Bacillus cereus ATCC 14579]
gi|229130032|ref|ZP_04258996.1| amino-acid racemase [Bacillus cereus BDRD-Cer4]
gi|29898382|gb|AAP11655.1| Aspartate racemase [Bacillus cereus ATCC 14579]
gi|228653476|gb|EEL09350.1| amino-acid racemase [Bacillus cereus BDRD-Cer4]
Length = 224
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFIDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ + SIP LH+ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQDSLSIPILHIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ + E + R+ +LAT+AT+ A YQ+ + + E + T + +I
Sbjct: 106 ETLQAIPE---------TAKRVALLATEATVQADIYQDGIAKRNIEYI--HHETWQEMIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E A L + L L V+ II ++ V ++ +D
Sbjct: 155 QIITCIKSGEIEKAHELWN-ALVLQLREEVDTAIIACTDLNVVASEN------FVDSSQC 207
Query: 318 LARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 208 LAKAVVRMYLSNTK 221
>gi|418975860|ref|ZP_13523757.1| aspartate racemase [Streptococcus oralis SK1074]
gi|383347009|gb|EID25015.1| aspartate racemase [Streptococcus oralis SK1074]
Length = 230
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 32/180 (17%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASVHSLKSK 140
TIG+IGG+S ST ++ + + N+ E L A +
Sbjct: 2 KTIGLIGGMSWESTTSY-----------------YQIINETIKKELGGLHSAKILLYSVD 44
Query: 141 TVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+++H + Q L LEQAGA IV+ + H + E +IP LH+
Sbjct: 45 FAEVEHYQAVGDWEKSGQLLADVAKRLEQAGADFIVICTNTMHKVAPQIQEKITIPVLHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
A+ L ++ ++G+L T T++ FY+EKL G EV++PD+A + V
Sbjct: 105 AVATAQALLADGIQ--------KVGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEV 156
>gi|212223950|ref|YP_002307186.1| aspartate racemase [Thermococcus onnurineus NA1]
gi|212008907|gb|ACJ16289.1| hypothetical aspartate racemase [Thermococcus onnurineus NA1]
Length = 226
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L++AGA I M + H DV + ++P + + E VA+E+K +K R+ +
Sbjct: 69 LKRAGAEIIAMSANTPHKVFPDVQKEVNVPMVSIIEAVAEEIKRRGIK--------RVLL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV--IIPTIEALNHRDMEGARNLLRIGI 279
L T T+S+ FY L+ +GFEVV+P + E + II N E RN I +
Sbjct: 121 LGTKTTMSSDFYVNALREEGFEVVVPSEEEQERLNSII-----FNELAFENFRNKAWI-V 174
Query: 280 QLLLVRA----VNAVIIGSDEM 297
+L+ A V VI+G E+
Sbjct: 175 ELIERYARKEKVKGVILGCTEL 196
>gi|228993503|ref|ZP_04153412.1| amino-acid racemase [Bacillus pseudomycoides DSM 12442]
gi|228766218|gb|EEM14863.1| amino-acid racemase [Bacillus pseudomycoides DSM 12442]
Length = 235
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 32/253 (12%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
IGI+ G+ ST F+ +V Y AK + P ++ + P F+ +
Sbjct: 10 IGILAGMGPKSTGPFVDTVVEQCQRVYGAKHDMDFPHMMIYSCPTP----FYID-RPIDH 64
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
K ++ I GA LE G I MPC+ +H + ++ S+P L++ +
Sbjct: 65 KAMEKAIINGAQK---------LENTGVDFIAMPCNTAHLYFYELQNSISVPILNMVDET 115
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
KE+ + K + +LATDAT+ +G YQ+ + +G + + K + + I
Sbjct: 116 IKEIPDHVRK---------VALLATDATVQSGIYQDGIAKRGMDYI--HKNSWQTAITQI 164
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALA 319
I + D+ A R + + L V+ VII ++ VL L +D LA
Sbjct: 165 ISNIKIGDLPDATKSWRT-LCIELAETVDGVIIACTDLNVVLNTGAHSL-YLVDSSACLA 222
Query: 320 RSTVTWARSNKKL 332
++ V SNKK+
Sbjct: 223 KAVVNEYLSNKKV 235
>gi|209520721|ref|ZP_03269470.1| aspartate racemase [Burkholderia sp. H160]
gi|209498846|gb|EDZ98952.1| aspartate racemase [Burkholderia sp. H160]
Length = 232
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ GA +++ + H + + ++PFLH+ + L+ A ++ R+G+
Sbjct: 71 LERGGADLVILATNTMHRVCESIEQAITVPFLHIADPTGAALRAAGVE--------RVGL 122
Query: 222 LATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPTIEALNHRDMEGA-RNLLRIGI 279
L T T+ FY +L+ + G + ++PD V + L H +++ A R + + I
Sbjct: 123 LGTRYTMEQTFYTGRLRERYGLDTLVPDDDERADVHRIIYDELCHGNVDDASRKVYQRVI 182
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWA 326
+ L R AVI+G E+ ++ +D +L D A++ V WA
Sbjct: 183 EHLAARGAQAVILGCTEITLLIKPEDSVL-PVFDTTALHAQAAVEWA 228
>gi|398939952|ref|ZP_10668963.1| aspartate racemase [Pseudomonas sp. GM41(2012)]
gi|398163466|gb|EJM51625.1| aspartate racemase [Pseudomonas sp. GM41(2012)]
Length = 230
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L+ GA C+V+ + H G + SIPFLH+ + + +EAG+ ++IG+
Sbjct: 71 LQAGGADCVVLCTNTMHKVAGQIQAAISIPFLHIADPAGR-------AAVEAGA-LKIGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP--DKATMEHVIIPTIEALNHRDMEGARNLLRIGI 279
L T T+ F +E+L + G V++P D+ H II E E +R + + I
Sbjct: 123 LGTAFTMEQDFLKERLTSMGLTVLVPEADERQAVHRIIYD-ELCVGVVSEASRKVYQQVI 181
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWA 326
+ L R A+I+G E+ G+L K + +D + A++ V +A
Sbjct: 182 ESLTRRGAQAIILGCTEI-GLLIKPEHSALPLLDTTELHAQAAVAFA 227
>gi|450007345|ref|ZP_21827720.1| putative amino acid recemase [Streptococcus mutans NMT4863]
gi|449186420|gb|EMB88251.1| putative amino acid recemase [Streptococcus mutans NMT4863]
Length = 230
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 50/188 (26%)
Query: 84 TIGIIGGVSVSSTLNF-----------LG-----KLVWYSAKDAEECPPFVVCNDPALNE 127
TIG+IGG+S ST ++ LG K++ YS D E + D A +
Sbjct: 3 TIGLIGGMSWESTTSYYQLINETIKKELGGLHSAKILLYSV-DFAEIEHYQASGDWAKSA 61
Query: 128 ELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEG 187
E+ ++Q L EQAGA IV+ + H + +
Sbjct: 62 EVL------------------SQIAQKL-------EQAGADFIVICTNTMHKVVPQIQKQ 96
Query: 188 CSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+IP LH+ + A+ L E ++ ++G+L T T++ FY+EKL G EV++P
Sbjct: 97 IAIPILHIAQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIP 148
Query: 248 DKATMEHV 255
D+ + V
Sbjct: 149 DQVGITEV 156
>gi|389684085|ref|ZP_10175416.1| aspartate racemase [Pseudomonas chlororaphis O6]
gi|388552424|gb|EIM15686.1| aspartate racemase [Pseudomonas chlororaphis O6]
Length = 232
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 14/168 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE GA C+V+ + H + S+PFLH+ + A+ LEAG+ + +G+
Sbjct: 71 LEAGGAECVVLCTNTMHKVAEQIQAVLSVPFLHIADPTAE-------AALEAGT-LSVGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATME--HVIIPTIEALNHRDMEGARNLLRIGI 279
L T T+ F +++L ++G +V++PD + H II E E +R + I
Sbjct: 123 LGTAFTMEQDFLKQRLVDRGLKVLVPDAVDRQVVHRIIYD-ELCVGVISETSRQRYQQVI 181
Query: 280 QLLLVRAVNAVIIGSDEMQGVL-PKDDPLLKKCIDPMDALARSTVTWA 326
Q L+ R +I+G E+ +L P+ PL +D + AR+ V +A
Sbjct: 182 QALMDRGAQVIILGCTEIGLLLKPEHSPL--PLLDTTELHARAAVAFA 227
>gi|423072005|ref|ZP_17060768.1| aspartate racemase [Desulfitobacterium hafniense DP7]
gi|361857291|gb|EHL09138.1| aspartate racemase [Desulfitobacterium hafniense DP7]
Length = 238
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 108/252 (42%), Gaps = 36/252 (14%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKD------AEECPPFVVCNDPALNEELFHASVHSL 137
TIG+IGG+S S+ + +L+ K + +C + SV
Sbjct: 10 TIGLIGGMSWESSAEYY-RLINEEVKGRLGGLHSAQCILY---------------SVDFA 53
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
+ +T Q G ++ L + LE AGA IV+ + H ++ G IP LH+ +
Sbjct: 54 EIETCQSSGEWGKAAEILANAAGSLEAAGAEFIVLCTNTMHKVADEIQAGLQIPLLHIAD 113
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEH 254
A++ ++ IG+L T T+ FY +L+ QG +V+ P DKA +
Sbjct: 114 MTAQQALTNNIRT--------IGLLGTRYTMEQDFYSSRLEAQGIKVLTPEEGDKAVVNE 165
Query: 255 VIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDP 314
VI + L + E +RN + I L+ + +++G E+ G+L K + +D
Sbjct: 166 VIYQEL-CLGIINQE-SRNQFKRIIADLVEQGAQGIVLGCTEI-GLLIKQEDSAVSLLDT 222
Query: 315 MDALARSTVTWA 326
A V +A
Sbjct: 223 TLIHASGAVDYA 234
>gi|229169488|ref|ZP_04297193.1| amino-acid racemase [Bacillus cereus AH621]
gi|423591264|ref|ZP_17567295.1| aspartate racemase [Bacillus cereus VD048]
gi|228613987|gb|EEK71107.1| amino-acid racemase [Bacillus cereus AH621]
gi|401233411|gb|EJR39904.1| aspartate racemase [Bacillus cereus VD048]
Length = 224
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 108/254 (42%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE G I MPC+ +H + ++ +IP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
K + E + R+ ++AT+AT+ AG YQ+ + + E V ++ + +I
Sbjct: 106 ETLKAIPE---------NTKRVAIIATEATVQAGIYQDGIAKRNIEYVHNEQ--WQEMIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + + L L V+ II ++ V+ +D +D
Sbjct: 155 QIISCIKGGEIEEARKLWSVLV-LQLKDEVDTAIIACTDLNVVVSED------FVDSAQC 207
Query: 318 LARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 208 LAKAVVRMYASNIK 221
>gi|116492431|ref|YP_804166.1| aspartate racemase [Pediococcus pentosaceus ATCC 25745]
gi|421894573|ref|ZP_16325060.1| aspartate racemase [Pediococcus pentosaceus IE-3]
gi|116102581|gb|ABJ67724.1| Aspartate racemase [Pediococcus pentosaceus ATCC 25745]
gi|385272488|emb|CCG90432.1| aspartate racemase [Pediococcus pentosaceus IE-3]
Length = 235
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 170 IVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLS 229
V+ C+ +H ++ D+ + +P +H+ K +KE + + +IG++ T T S
Sbjct: 80 FVIACNTAHFFYDDLQKATDVPIVHMPRETVKHIKE------QYPNAKKIGIIGTPGTTS 133
Query: 230 AGFYQEKLQNQGFEVVLPDKATME---HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRA 286
G Y +L +GFEVV P KA + +I I+ N D E ++L++ ++ +
Sbjct: 134 DGIYDRELLAEGFEVVKPTKAIQDLTSKLIFDDIKEQNLVDAELFYHILKMMVE---EQG 190
Query: 287 VNAVIIGSDEM 297
+ VI+G E+
Sbjct: 191 ADVVILGCTEL 201
>gi|428281019|ref|YP_005562754.1| amino acid racemase [Bacillus subtilis subsp. natto BEST195]
gi|291485976|dbj|BAI87051.1| amino acid racemase [Bacillus subtilis subsp. natto BEST195]
Length = 227
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 57/258 (22%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPALNEELFHASV---HS 136
IGI+ G+ ST F+ K++ Y A + + P ++ + P F+A H
Sbjct: 2 IGILAGMGPKSTSPFIDKVIDYCQKLYGASNDIDYPHMMIYSCPTP----FYADRPIDHD 57
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
K + I GAV LE+ I +PC+ +H ++ ++ + S+P LH+
Sbjct: 58 EMKKAI----IDGAVK---------LEKTDVDFIALPCNTAHVYYEEIQQALSVPMLHIV 104
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME-HV 255
E KE+ P A V VL T+ T+ + YQ+ L+ G EVV D +
Sbjct: 105 EETIKEI------PHPAKKAV---VLGTEPTIQSAIYQKVLEENGQEVVHKDHWQQAVNQ 155
Query: 256 IIPTIEALNHRDMEGARNLLRIGIQLLLVRA---------VNAVIIGSDEMQGVLPKDDP 306
+I I+ NH ME +++L + + + A +NAV+ D +Q +P
Sbjct: 156 LIAAIKQPNH--MEYSQSLWQTLYEEISQHADIIISACTDLNAVL---DHIQSEIP---- 206
Query: 307 LLKKCIDPMDALARSTVT 324
ID LA+STV+
Sbjct: 207 ----MIDSSACLAKSTVS 220
>gi|229147323|ref|ZP_04275673.1| amino-acid racemase [Bacillus cereus BDRD-ST24]
gi|228636155|gb|EEK92635.1| amino-acid racemase [Bacillus cereus BDRD-ST24]
Length = 225
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 42/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVARCQTIYGAKYDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQRSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHVI 256
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K TM + I
Sbjct: 106 ETLQSIPE---------NTKRVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQI 156
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I I++ ++E AR L + + L V+ II ++ V ++ +D
Sbjct: 157 ITYIKS---GEVENARKLWS-ALVVQLKDEVDTAIIACTDLNVVAASEN-----FVDSSQ 207
Query: 317 ALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 208 CLAKAVVRMYLSNTK 222
>gi|296505218|ref|YP_003666918.1| aspartate racemase [Bacillus thuringiensis BMB171]
gi|296326270|gb|ADH09198.1| aspartate racemase [Bacillus thuringiensis BMB171]
Length = 224
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 111/255 (43%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVARCQTIYGAKYDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ SIP L+
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQHSLSIPILN--- 102
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHVI 256
+ E +A K ++ R+ +LAT+AT+ AG YQ+ + + E + +K TM + I
Sbjct: 103 -IVDETLQAIPKNVK-----RVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQI 156
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I I++ ++E AR L + + L V+ VII ++ V +D +D
Sbjct: 157 ITYIKS---GEVEKARKLWS-ALVVQLKDEVDTVIIACTDLNVVASED------FVDSSQ 206
Query: 317 ALARSTVTWARSNKK 331
LA + V SN K
Sbjct: 207 CLADAVVRMYLSNTK 221
>gi|340758182|ref|ZP_08694773.1| aspartate racemase subfamily protein [Fusobacterium varium ATCC
27725]
gi|251835097|gb|EES63640.1| aspartate racemase subfamily protein [Fusobacterium varium ATCC
27725]
Length = 235
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 119/258 (46%), Gaps = 36/258 (13%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPAL--NEELFHASVHSLKSK 140
+GI+GG+ +T++ K+V + AK E+ ++ N+P + ++ S +
Sbjct: 5 VVGILGGMGPEATIDLFAKIVEETHAKCDEDHLRIIIDNNPKMPSRQDAIMKGTESPVAA 64
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
V A ++NL+ +AGA I++ + +H ++ +V+ IPFLH+ E
Sbjct: 65 MV-------ATAENLK-------KAGADFIIIGANTAHYFYDEVASQVDIPFLHIIEEAV 110
Query: 201 KELKEAKLKPLEAGSGV-RIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
KE+ + G+ ++GV+AT+A + Y + G EV+ K +++ + T
Sbjct: 111 KEM-------MRQVPGIKKVGVMATNAAVKIKLYDKCCAKFGIEVIAA-KEDVQNKVHDT 162
Query: 260 I-----EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDP 314
I + ++++ A + I+ A+I+G E+ +L K IDP
Sbjct: 163 IFDFKYNGVTEKNVKDATDCAEYFIE----NGAEALIMGCTEIPIIL-KGKSFTVPLIDP 217
Query: 315 MDALARSTVTWARSNKKL 332
D + + V +A++ +L
Sbjct: 218 NDIIGKVAVAYAKNEYEL 235
>gi|229072257|ref|ZP_04205463.1| amino-acid racemase [Bacillus cereus F65185]
gi|229082009|ref|ZP_04214498.1| amino-acid racemase [Bacillus cereus Rock4-2]
gi|228701308|gb|EEL53805.1| amino-acid racemase [Bacillus cereus Rock4-2]
gi|228710865|gb|EEL62834.1| amino-acid racemase [Bacillus cereus F65185]
Length = 224
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 110/255 (43%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAGCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQHSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHVI 256
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K TM + I
Sbjct: 106 ETLQAIPE---------TTKRVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQI 156
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I I++ ++E AR L + + L V+ II ++ V +D +D
Sbjct: 157 ITYIKS---GEVEEARKLWN-ALVVQLKDEVDTAIIACTDLNVVASED------FVDSSQ 206
Query: 317 ALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 207 CLAKAVVRMYLSNIK 221
>gi|317486428|ref|ZP_07945255.1| aspartate racemase [Bilophila wadsworthia 3_1_6]
gi|316922338|gb|EFV43597.1| aspartate racemase [Bilophila wadsworthia 3_1_6]
Length = 238
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 106/255 (41%), Gaps = 40/255 (15%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL--FHAS---VHSL 137
TIG+IGG+S ST+ + + + N + E L FH++ +HS+
Sbjct: 2 KTIGLIGGMSWESTVTY-----------------YQIVN-RLVQERLGGFHSAKCILHSV 43
Query: 138 KSKTVQLDHIRGAVSQN---LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH 194
++ G ++ L LE+AGA C+++ + H V S+P LH
Sbjct: 44 DFHEIEACQRAGDWERSGELLAEAARGLERAGADCVLICTNTMHKVADAVQAATSLPLLH 103
Query: 195 VGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD---KAT 251
+ E A EL+ A + +G+L T T+ FY KL +G V++P+ +A
Sbjct: 104 IAELTADELEAAGVST--------VGLLGTRYTMEQDFYTRKLVERGITVLIPEEDGRAF 155
Query: 252 MEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC 311
+ VI E E +R I L R VI+G E+ G+L + +
Sbjct: 156 VNRVIFD--ELCLGTVSESSRRAFAAIIGGLTARGAQGVILGCTEI-GLLVRPGDTSARL 212
Query: 312 IDPMDALARSTVTWA 326
D + AR +A
Sbjct: 213 FDTTEIHARRAALYA 227
>gi|406899824|gb|EKD42996.1| hypothetical protein ACD_72C00510G0003 [uncultured bacterium]
Length = 271
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 110/244 (45%), Gaps = 44/244 (18%)
Query: 77 SLLN--QANTIGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPALNEEL 129
SL+N TIGI+GG+ +S+ N +L+ +Y AK E PP ++ + P + +
Sbjct: 3 SLINYDSKKTIGILGGMGPASSANIYEELINKAQKYYGAKQDYEFPPMILYSLPMHDWD- 61
Query: 130 FHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCS 189
+ + +D ++ + + ++ LE AG I++ C+ H ++ ++ + S
Sbjct: 62 --------TTGFLHMDSVKDQLIKGVK----VLENAGCDLIIIGCNTVHHFYNELQQSVS 109
Query: 190 IPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK 249
+P +++ E ++ ++ K ++ V +TD+T G Y + L G + +
Sbjct: 110 VPIINMVEETVDKVVQSGYK--------KVAVFSTDSTRRLGVYDKVLNRAGIQNTYLNS 161
Query: 250 ATMEHV--IIPTIEA--LNHRDMEGARNLL----RIGIQLLLVRAVNAVIIGSDEMQGVL 301
E V +I EA L D + +NL+ +G Q AVI+G E+ +
Sbjct: 162 HQQELVTRVIGNAEAGKLTDLDTKILKNLISEVKNLGAQ--------AVILGCTEIPLAI 213
Query: 302 PKDD 305
+ D
Sbjct: 214 KQSD 217
>gi|386719308|ref|YP_006185634.1| Aspartate racemase [Stenotrophomonas maltophilia D457]
gi|384078870|emb|CCH13463.1| Aspartate racemase [Stenotrophomonas maltophilia D457]
Length = 230
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 30/230 (13%)
Query: 83 NTIGIIGGVSVSSTLNF---LGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
T+G+IGG+S S+ + + + V + A + D A ++L H L
Sbjct: 2 KTLGLIGGMSWESSAQYYRLINEAVRHRLGGAHSAQLLLWSVDFAGIKQLQHDGQWDLLG 61
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+H+ A + L+ GA +V+ + HA G + GC +P LH+ +
Sbjct: 62 -----NHMLDAARR--------LQAGGAELLVICTNTMHALAGRIEAGCPLPLLHIADPT 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLP---DKATMEHV 255
A + +A ++ ++G+L T T+ FY+++LQ++ G EV++P D+ ++ +
Sbjct: 109 AAAILQAGIR--------KVGLLGTAFTMEQAFYRDRLQDRFGLEVLVPEADDRRSVHDI 160
Query: 256 IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
I E + E +R I L+ R A+I+G E+ ++ +D
Sbjct: 161 IYQ--ELICGVVSEHSRQAYAGVIARLVARGAEAIILGCTEIMLLVRAED 208
>gi|88802581|ref|ZP_01118108.1| aspartate racemase [Polaribacter irgensii 23-P]
gi|88781439|gb|EAR12617.1| aspartate racemase [Polaribacter irgensii 23-P]
Length = 243
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 78/153 (50%), Gaps = 10/153 (6%)
Query: 155 LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAG 214
L+ K LE++ +V+ + H ++E ++ + + E K + ++ +K
Sbjct: 76 LKIKIQILEKSNVDYVVLASNTPHLVFDKLAESVNVKMISIVEETCKAISKSGIK----- 130
Query: 215 SGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDM--EGAR 272
++G+L T +T+S GFYQ+ +N G ++V+P+ ++ ++ L ++ E +
Sbjct: 131 ---KVGLLGTKSTMSKGFYQKVGENNGIKIVIPNDENQNYIHEKYMDELVFNEIIPETKK 187
Query: 273 NLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
L+RI +L + + +++G E+ +L ++D
Sbjct: 188 ELIRIINELEVNENIEGIVLGGTELPLILKQED 220
>gi|423634357|ref|ZP_17610010.1| aspartate racemase [Bacillus cereus VD156]
gi|401281143|gb|EJR87057.1| aspartate racemase [Bacillus cereus VD156]
Length = 224
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 109/256 (42%), Gaps = 45/256 (17%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK E P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVANCQTIYGAKHDMEFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH-VG 196
K + I GA LE GA I MPC+ +H + ++ SIP L+ V
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQHSLSIPILNIVD 105
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHV 255
E + K K R+ +LAT+AT+ +G YQ+ + + E + +K TM +
Sbjct: 106 ETLQAIPKNTK----------RVALLATEATIQSGIYQDGIAKRNIEYIHYEKWQTMINQ 155
Query: 256 IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPM 315
II I++ ++E AR L + + L A+I +D V+ +D +D
Sbjct: 156 IITYIQS---GEVEEARKLWSVLVVQLKDEVATAIIACTD--LNVVASED-----FVDSS 205
Query: 316 DALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 206 QCLAKAVVRMYLSNIK 221
>gi|257878492|ref|ZP_05658145.1| aspartate racemase [Enterococcus faecium 1,230,933]
gi|257882913|ref|ZP_05662566.1| aspartate racemase [Enterococcus faecium 1,231,502]
gi|257884377|ref|ZP_05664030.1| aspartate racemase [Enterococcus faecium 1,231,501]
gi|257889308|ref|ZP_05668961.1| aspartate racemase [Enterococcus faecium 1,231,410]
gi|257894321|ref|ZP_05673974.1| aspartate racemase [Enterococcus faecium 1,231,408]
gi|260560081|ref|ZP_05832259.1| aspartate racemase [Enterococcus faecium C68]
gi|261207431|ref|ZP_05922117.1| aspartate racemase [Enterococcus faecium TC 6]
gi|289566469|ref|ZP_06446894.1| aspartate racemase [Enterococcus faecium D344SRF]
gi|293560166|ref|ZP_06676668.1| aspartate racemase [Enterococcus faecium E1162]
gi|294621572|ref|ZP_06700738.1| aspartate racemase [Enterococcus faecium U0317]
gi|314939955|ref|ZP_07847155.1| aspartate racemase [Enterococcus faecium TX0133a04]
gi|314942564|ref|ZP_07849398.1| aspartate racemase [Enterococcus faecium TX0133C]
gi|314947462|ref|ZP_07850877.1| aspartate racemase [Enterococcus faecium TX0082]
gi|314952486|ref|ZP_07855487.1| aspartate racemase [Enterococcus faecium TX0133A]
gi|314992417|ref|ZP_07857843.1| aspartate racemase [Enterococcus faecium TX0133B]
gi|314996257|ref|ZP_07861316.1| aspartate racemase [Enterococcus faecium TX0133a01]
gi|383329007|ref|YP_005354891.1| Aspartate racemase [Enterococcus faecium Aus0004]
gi|389868825|ref|YP_006376248.1| aspartate racemase [Enterococcus faecium DO]
gi|424781148|ref|ZP_18208009.1| aspartate racemase [Enterococcus faecium V689]
gi|424797103|ref|ZP_18222743.1| aspartate racemase [Enterococcus faecium S447]
gi|424834652|ref|ZP_18259349.1| aspartate racemase [Enterococcus faecium R501]
gi|424856433|ref|ZP_18280658.1| aspartate racemase [Enterococcus faecium R499]
gi|424884119|ref|ZP_18307744.1| aspartate racemase [Enterococcus faecium R497]
gi|424945046|ref|ZP_18360800.1| aspartate racemase [Enterococcus faecium R496]
gi|424954304|ref|ZP_18369209.1| aspartate racemase [Enterococcus faecium R494]
gi|424956054|ref|ZP_18370852.1| aspartate racemase [Enterococcus faecium R446]
gi|424960876|ref|ZP_18375353.1| aspartate racemase [Enterococcus faecium P1986]
gi|424963843|ref|ZP_18377994.1| aspartate racemase [Enterococcus faecium P1190]
gi|424966747|ref|ZP_18380504.1| aspartate racemase [Enterococcus faecium P1140]
gi|424970406|ref|ZP_18383924.1| aspartate racemase [Enterococcus faecium P1139]
gi|424975065|ref|ZP_18388255.1| aspartate racemase [Enterococcus faecium P1137]
gi|424976621|ref|ZP_18389696.1| aspartate racemase [Enterococcus faecium P1123]
gi|424980857|ref|ZP_18393622.1| aspartate racemase [Enterococcus faecium ERV99]
gi|424983785|ref|ZP_18396358.1| aspartate racemase [Enterococcus faecium ERV69]
gi|424988567|ref|ZP_18400879.1| aspartate racemase [Enterococcus faecium ERV38]
gi|424992676|ref|ZP_18404724.1| aspartate racemase [Enterococcus faecium ERV26]
gi|424993425|ref|ZP_18405417.1| aspartate racemase [Enterococcus faecium ERV168]
gi|424998396|ref|ZP_18410085.1| aspartate racemase [Enterococcus faecium ERV165]
gi|424999923|ref|ZP_18411515.1| aspartate racemase [Enterococcus faecium ERV161]
gi|425004594|ref|ZP_18415893.1| aspartate racemase [Enterococcus faecium ERV102]
gi|425007634|ref|ZP_18418755.1| aspartate racemase [Enterococcus faecium ERV1]
gi|425010413|ref|ZP_18421367.1| aspartate racemase [Enterococcus faecium E422]
gi|425013821|ref|ZP_18424529.1| aspartate racemase [Enterococcus faecium E417]
gi|425018303|ref|ZP_18428757.1| aspartate racemase [Enterococcus faecium C621]
gi|425021128|ref|ZP_18431406.1| aspartate racemase [Enterococcus faecium C497]
gi|425023181|ref|ZP_18433315.1| aspartate racemase [Enterococcus faecium C1904]
gi|425030834|ref|ZP_18435994.1| aspartate racemase [Enterococcus faecium 515]
gi|425036177|ref|ZP_18440962.1| aspartate racemase [Enterococcus faecium 514]
gi|425037509|ref|ZP_18442173.1| aspartate racemase [Enterococcus faecium 513]
gi|425045350|ref|ZP_18449459.1| aspartate racemase [Enterococcus faecium 510]
gi|425049260|ref|ZP_18453122.1| aspartate racemase [Enterococcus faecium 509]
gi|425051667|ref|ZP_18455323.1| aspartate racemase [Enterococcus faecium 506]
gi|425060125|ref|ZP_18463429.1| aspartate racemase [Enterococcus faecium 503]
gi|430830778|ref|ZP_19448834.1| aspartate racemase [Enterococcus faecium E0333]
gi|430843967|ref|ZP_19461865.1| aspartate racemase [Enterococcus faecium E1050]
gi|430845966|ref|ZP_19463831.1| aspartate racemase [Enterococcus faecium E1133]
gi|430851739|ref|ZP_19469474.1| aspartate racemase [Enterococcus faecium E1258]
gi|430854888|ref|ZP_19472600.1| aspartate racemase [Enterococcus faecium E1392]
gi|431370207|ref|ZP_19509906.1| aspartate racemase [Enterococcus faecium E1627]
gi|431541974|ref|ZP_19518203.1| aspartate racemase [Enterococcus faecium E1731]
gi|431750044|ref|ZP_19538771.1| aspartate racemase [Enterococcus faecium E2297]
gi|431754890|ref|ZP_19543550.1| aspartate racemase [Enterococcus faecium E2883]
gi|431767267|ref|ZP_19555721.1| aspartate racemase [Enterococcus faecium E1321]
gi|431770891|ref|ZP_19559286.1| aspartate racemase [Enterococcus faecium E1644]
gi|431772345|ref|ZP_19560686.1| aspartate racemase [Enterococcus faecium E2369]
gi|431775710|ref|ZP_19563981.1| aspartate racemase [Enterococcus faecium E2560]
gi|431778857|ref|ZP_19567062.1| aspartate racemase [Enterococcus faecium E4389]
gi|403399530|sp|H8L901.1|RACD_ENTFU RecName: Full=Aspartate racemase; AltName: Full=Rac(fm)
gi|257812720|gb|EEV41478.1| aspartate racemase [Enterococcus faecium 1,230,933]
gi|257818571|gb|EEV45899.1| aspartate racemase [Enterococcus faecium 1,231,502]
gi|257820215|gb|EEV47363.1| aspartate racemase [Enterococcus faecium 1,231,501]
gi|257825668|gb|EEV52294.1| aspartate racemase [Enterococcus faecium 1,231,410]
gi|257830700|gb|EEV57307.1| aspartate racemase [Enterococcus faecium 1,231,408]
gi|260073916|gb|EEW62240.1| aspartate racemase [Enterococcus faecium C68]
gi|260078322|gb|EEW66027.1| aspartate racemase [Enterococcus faecium TC 6]
gi|289161734|gb|EFD09609.1| aspartate racemase [Enterococcus faecium D344SRF]
gi|291598877|gb|EFF29928.1| aspartate racemase [Enterococcus faecium U0317]
gi|291605838|gb|EFF35270.1| aspartate racemase [Enterococcus faecium E1162]
gi|313589579|gb|EFR68424.1| aspartate racemase [Enterococcus faecium TX0133a01]
gi|313593052|gb|EFR71897.1| aspartate racemase [Enterococcus faecium TX0133B]
gi|313595392|gb|EFR74237.1| aspartate racemase [Enterococcus faecium TX0133A]
gi|313598668|gb|EFR77513.1| aspartate racemase [Enterococcus faecium TX0133C]
gi|313640789|gb|EFS05369.1| aspartate racemase [Enterococcus faecium TX0133a04]
gi|313646012|gb|EFS10592.1| aspartate racemase [Enterococcus faecium TX0082]
gi|378938701|gb|AFC63773.1| Aspartate racemase [Enterococcus faecium Aus0004]
gi|388534074|gb|AFK59266.1| aspartate racemase [Enterococcus faecium DO]
gi|402921907|gb|EJX42324.1| aspartate racemase [Enterococcus faecium S447]
gi|402921986|gb|EJX42393.1| aspartate racemase [Enterococcus faecium R501]
gi|402924295|gb|EJX44509.1| aspartate racemase [Enterococcus faecium V689]
gi|402929956|gb|EJX49666.1| aspartate racemase [Enterococcus faecium R499]
gi|402933859|gb|EJX53264.1| aspartate racemase [Enterococcus faecium R497]
gi|402935844|gb|EJX55056.1| aspartate racemase [Enterococcus faecium R496]
gi|402937183|gb|EJX56315.1| aspartate racemase [Enterococcus faecium R494]
gi|402945571|gb|EJX63910.1| aspartate racemase [Enterococcus faecium P1986]
gi|402946786|gb|EJX65036.1| aspartate racemase [Enterococcus faecium R446]
gi|402948025|gb|EJX66196.1| aspartate racemase [Enterococcus faecium P1190]
gi|402954807|gb|EJX72393.1| aspartate racemase [Enterococcus faecium P1137]
gi|402955842|gb|EJX73342.1| aspartate racemase [Enterococcus faecium P1140]
gi|402961969|gb|EJX78955.1| aspartate racemase [Enterococcus faecium P1139]
gi|402965212|gb|EJX81940.1| aspartate racemase [Enterococcus faecium ERV99]
gi|402968994|gb|EJX85439.1| aspartate racemase [Enterococcus faecium P1123]
gi|402970695|gb|EJX87013.1| aspartate racemase [Enterococcus faecium ERV69]
gi|402971589|gb|EJX87853.1| aspartate racemase [Enterococcus faecium ERV38]
gi|402972411|gb|EJX88617.1| aspartate racemase [Enterococcus faecium ERV26]
gi|402982495|gb|EJX97956.1| aspartate racemase [Enterococcus faecium ERV168]
gi|402983292|gb|EJX98703.1| aspartate racemase [Enterococcus faecium ERV165]
gi|402989075|gb|EJY04032.1| aspartate racemase [Enterococcus faecium ERV102]
gi|402990318|gb|EJY05192.1| aspartate racemase [Enterococcus faecium ERV161]
gi|402994665|gb|EJY09185.1| aspartate racemase [Enterococcus faecium ERV1]
gi|403000076|gb|EJY14227.1| aspartate racemase [Enterococcus faecium E422]
gi|403000145|gb|EJY14290.1| aspartate racemase [Enterococcus faecium E417]
gi|403002457|gb|EJY16430.1| aspartate racemase [Enterococcus faecium C621]
gi|403007715|gb|EJY21266.1| aspartate racemase [Enterococcus faecium C497]
gi|403010549|gb|EJY23919.1| aspartate racemase [Enterococcus faecium C1904]
gi|403015630|gb|EJY28508.1| aspartate racemase [Enterococcus faecium 514]
gi|403016948|gb|EJY29733.1| aspartate racemase [Enterococcus faecium 515]
gi|403021873|gb|EJY34292.1| aspartate racemase [Enterococcus faecium 513]
gi|403027225|gb|EJY39124.1| aspartate racemase [Enterococcus faecium 510]
gi|403028463|gb|EJY40285.1| aspartate racemase [Enterococcus faecium 509]
gi|403037170|gb|EJY48479.1| aspartate racemase [Enterococcus faecium 506]
gi|403042899|gb|EJY53835.1| aspartate racemase [Enterococcus faecium 503]
gi|430482367|gb|ELA59485.1| aspartate racemase [Enterococcus faecium E0333]
gi|430496557|gb|ELA72616.1| aspartate racemase [Enterococcus faecium E1050]
gi|430539786|gb|ELA80025.1| aspartate racemase [Enterococcus faecium E1133]
gi|430542321|gb|ELA82429.1| aspartate racemase [Enterococcus faecium E1258]
gi|430547767|gb|ELA87683.1| aspartate racemase [Enterococcus faecium E1392]
gi|430583954|gb|ELB22312.1| aspartate racemase [Enterococcus faecium E1627]
gi|430593021|gb|ELB31008.1| aspartate racemase [Enterococcus faecium E1731]
gi|430610517|gb|ELB47661.1| aspartate racemase [Enterococcus faecium E2297]
gi|430618718|gb|ELB55559.1| aspartate racemase [Enterococcus faecium E2883]
gi|430631071|gb|ELB67401.1| aspartate racemase [Enterococcus faecium E1321]
gi|430634456|gb|ELB70579.1| aspartate racemase [Enterococcus faecium E1644]
gi|430638033|gb|ELB74014.1| aspartate racemase [Enterococcus faecium E2369]
gi|430642557|gb|ELB78331.1| aspartate racemase [Enterococcus faecium E2560]
gi|430643338|gb|ELB79082.1| aspartate racemase [Enterococcus faecium E4389]
Length = 243
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 13/164 (7%)
Query: 170 IVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLS 229
IV+ C+ +H + ++ IP LH+ A EL + + R+ +L T+ ++
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL-------VRQHTTGRVAILGTEGSMK 132
Query: 230 AGFYQEKLQNQGFEVVLPDKATME---HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRA 286
AG Y+ +++N GFE V+PD A E ++I I+ ++ + E +L ++ L
Sbjct: 133 AGIYEREVKNLGFETVIPDTALQEKINYLIYHEIKESDYLNQELYYEILEEAVERL---N 189
Query: 287 VNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNK 330
VI+G E+ + + ID LA T+ A + +
Sbjct: 190 CEKVILGCTELSLMHEFAEDNHYPVIDAQSILADRTIERALAER 233
>gi|430758154|ref|YP_007208053.1| Amino acid racemase [Bacillus subtilis subsp. subtilis str. BSP1]
gi|430022674|gb|AGA23280.1| Amino acid racemase [Bacillus subtilis subsp. subtilis str. BSP1]
Length = 227
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 111/249 (44%), Gaps = 39/249 (15%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPALNEELFHASV---HS 136
IGI+ G+ ST F+ K++ Y A + + P ++ + P F+A H
Sbjct: 2 IGILAGMGPKSTSPFIDKVIDYCQKLYGASNDIDYPHMMIYSCPTP----FYADRPIDHD 57
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
K + I GAV LE+ G I +PC+ +H ++ ++ + S+P LH+
Sbjct: 58 EMKKAI----IDGAVK---------LEKTGVDFIALPCNTAHVYYEEIQQALSVPMLHIV 104
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME-HV 255
E KE+ P A V VL T+ T+ + YQ+ L+ G EVV D +
Sbjct: 105 EETIKEI------PHPAKKAV---VLGTEPTIQSAIYQKVLKANGQEVVHKDHWQQAVNQ 155
Query: 256 IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPM 315
+I I+ NH M+ ++ L + + + A + +I ++ VL + ID
Sbjct: 156 LIAAIKQPNH--MQHSKALWQTLYEEISQHA-DIIISACTDLNAVLDHTQSEI-PIIDSS 211
Query: 316 DALARSTVT 324
LA+STV+
Sbjct: 212 ACLAKSTVS 220
>gi|157691918|ref|YP_001486380.1| aspartate racemase [Bacillus pumilus SAFR-032]
gi|157680676|gb|ABV61820.1| aspartate racemase [Bacillus pumilus SAFR-032]
Length = 232
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 114/260 (43%), Gaps = 36/260 (13%)
Query: 82 ANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
+ TIGI+GG+ +T++ + K++ ++ PA+ ++ +H +
Sbjct: 2 STTIGIMGGMGPLATIDLMKKIISHT---------------PAIKDQ---DHLHVIADNY 43
Query: 142 VQLDHIRGAV-------SQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH 194
Q+ A+ ++ + LE+AGA I++ C+ +H + +V + IP ++
Sbjct: 44 PQIPDRTNAIFGKGEDPTEYMIASAKRLERAGADFILIACNTAHFFLENVQQSTHIPIMN 103
Query: 195 VGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEH 254
+ AK L + +G+L TD TL YQ+ + +V+ P + ++
Sbjct: 104 MPLETAKHLNKHHY--------TSVGLLCTDGTLKTKLYQKACAHHKIDVMTPSEELQKN 155
Query: 255 VIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDP 314
V + I A+ + + L + ++L+ + A+I G E+ VL + K IDP
Sbjct: 156 V-MNGIYAVKAGKLSKGESELALASKILINQGAEAIIAGCTEIPLVLRSTKAV--KVIDP 212
Query: 315 MDALARSTVTWARSNKKLTL 334
LA+ V +KL +
Sbjct: 213 TVILAKEAVKLVYELEKLNI 232
>gi|196046874|ref|ZP_03114095.1| aspartate racemase family protein [Bacillus cereus 03BB108]
gi|196022249|gb|EDX60935.1| aspartate racemase family protein [Bacillus cereus 03BB108]
Length = 232
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 56/266 (21%)
Query: 84 TIGIIGGVSVSSTLNF-----------LGKLVWYSAK------DAEECPPFVVCNDPALN 126
TIG+IGG+S ST + LG L +SAK D EE F D
Sbjct: 3 TIGLIGGMSWESTAEYYRIINEEIKERLGGL--HSAKCMINSVDFEEIERFQSNGDWNGA 60
Query: 127 EELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSE 186
E+ + +SL+S AGA I++ + H + E
Sbjct: 61 GEVLGNAAYSLQS-------------------------AGADFIIICTNTMHKVVEKIKE 95
Query: 187 GCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVL 246
IP LH+ + AKE+K ++ +G+L T T+ FY+ +++ V++
Sbjct: 96 NIHIPILHIADATAKEIKRKDIQT--------VGLLGTKYTMEQDFYKLRIEENHVNVMI 147
Query: 247 PDKATMEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD 304
P K E + +I T L + + R+ I+ L+ V +I+G E+ G+L K
Sbjct: 148 PSKKDREKINEVIYTELCLGKVTSQSRQYYKRV-IEDLVQEGVQGIILGCTEI-GLLIKQ 205
Query: 305 DPLLKKCIDPMDALARSTVTWARSNK 330
+ + D A V +A SN+
Sbjct: 206 EDVSVPIFDTTYIHAVEAVNFALSNR 231
>gi|424059414|ref|ZP_17796905.1| aspartate racemase [Acinetobacter baumannii Ab33333]
gi|404670152|gb|EKB38044.1| aspartate racemase [Acinetobacter baumannii Ab33333]
Length = 242
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 40/178 (22%)
Query: 84 TIGIIGGVSVSSTL-----------NFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG++GG+S ST N LGKL +SAK ++ N E
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQNKLGKL--HSAK--------IILNSVDFEE----- 47
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+ L++K + + GA L + LE+AGA CI++ + H + + ++PF
Sbjct: 48 -IAVLQAKGLWQE--AGAY---LAEQAQNLEKAGADCILVCTNTMHKVAPQIEDAITVPF 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
+H+ + AKE+ ++ ++ +L T T+ FY+ +LQ++ EV++P+ A
Sbjct: 102 IHIADATAKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDREIEVIIPNDA 151
>gi|425042143|ref|ZP_18446501.1| aspartate racemase [Enterococcus faecium 511]
gi|403024183|gb|EJY36359.1| aspartate racemase [Enterococcus faecium 511]
Length = 243
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 13/164 (7%)
Query: 170 IVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLS 229
IV+ C+ +H + ++ IP LH+ A EL + + R+ +L T+ ++
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL-------VRQHTTGRVAILGTEGSMK 132
Query: 230 AGFYQEKLQNQGFEVVLPDKATME---HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRA 286
AG Y+ +++N GFE V+PD A E ++I I+ ++ + E +L ++ L
Sbjct: 133 AGIYEREVKNLGFETVIPDTALQEKNNYLIYHEIKESDYLNQELYYEILEEAVERL---N 189
Query: 287 VNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNK 330
VI+G E+ + + ID LA T+ A + +
Sbjct: 190 CEKVILGCTELSLMHEFAEDNHYPVIDAQSILADRTIERALAER 233
>gi|421078065|ref|ZP_15539024.1| aspartate racemase [Pelosinus fermentans JBW45]
gi|392523650|gb|EIW46817.1| aspartate racemase [Pelosinus fermentans JBW45]
Length = 236
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 80/172 (46%), Gaps = 35/172 (20%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVH---SLKSK 140
+IGIIGG+ +T + K++ + D ++E H + ++ +
Sbjct: 4 SIGIIGGMGSLATCDLFKKIIDMT--------------DAKCDQEHIHICIDCNTNIPDR 49
Query: 141 TVQL-----DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
T + D I V +R L+ GA ++MPC+ +H ++ ++ IP L++
Sbjct: 50 TKAILGGGKDPIPEMVRSGVR-----LQSMGANVLIMPCNTAHYFYDKITPFFDIPLLNM 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ +E++ K+K +IG+LATD T+ + Y L + G ++V+P
Sbjct: 105 LKETVQEIQRRKIK--------KIGLLATDGTIKSRVYHTALADPGIDLVIP 148
>gi|225023584|ref|ZP_03712776.1| hypothetical protein EIKCOROL_00443 [Eikenella corrodens ATCC
23834]
gi|224943679|gb|EEG24888.1| hypothetical protein EIKCOROL_00443 [Eikenella corrodens ATCC
23834]
Length = 235
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 32/230 (13%)
Query: 83 NTIGIIGGVSVSSTLNFLGKL--VWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSK 140
NT+GIIGG+S ST + ++ + K P ++ ASV +
Sbjct: 2 NTLGIIGGMSPESTAAYYTQINRLINRQKGGNHSAPILL------------ASVEFQEIV 49
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
Q + L LEQAGA +++ + H + +PFLH+ + VA
Sbjct: 50 DCQQRGDWHKAGEILAQAARTLEQAGADAVLLATNTMHKVAAPIQAVIGVPFLHILDSVA 109
Query: 201 KELKEAKLKPLEAGSGVR-IGVLATDATLSAGFYQEKLQNQGFEVVLPD---KATMEHVI 256
+ ++ G+R +G+L T T+ FY+E L +G + ++PD +A + +I
Sbjct: 110 ERIR---------AQGIRTVGLLGTRFTMQDAFYREGLAARGIQAIVPDECVQAEIHRII 160
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL--PKD 304
+ N E +R I+ L + +I+G E+ G+L P+D
Sbjct: 161 FEELCVGNF--TENSRRFYVQAIERLAAQGAQGIILGCTEI-GLLVRPED 207
>gi|423521363|ref|ZP_17497836.1| aspartate racemase [Bacillus cereus HuA4-10]
gi|401178569|gb|EJQ85746.1| aspartate racemase [Bacillus cereus HuA4-10]
Length = 221
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 45/256 (17%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPA---LNEELFHASVHS 136
IGI+ G+ ST F+ +V Y AK + P ++ + P ++ + HA++
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAGCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHAAM-- 59
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
K + I GA LE G I MPC+ +H + ++ SIP L++
Sbjct: 60 --KKAI----IEGAQK---------LESTGVDFIAMPCNTAHLYFEELQCSISIPILNIV 104
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHV 255
+ + + E + R+ +LAT+AT+ AG YQ+ + + E + +K TM +
Sbjct: 105 DETLQTIPE---------NTKRVALLATEATVQAGIYQDGIAKRNIEYIHNEKWQTMINQ 155
Query: 256 IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPM 315
II I++ ++E AR L + + L L V+ II ++ V +D +D
Sbjct: 156 IITCIKS---GEVEEARKLWSVLV-LQLKDEVDTAIIACTDLNVVASED------FVDSA 205
Query: 316 DALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 206 QCLAQAIVKMYLSNTK 221
>gi|320528690|ref|ZP_08029842.1| aspartate racemase [Solobacterium moorei F0204]
gi|320130900|gb|EFW23478.1| aspartate racemase [Solobacterium moorei F0204]
Length = 236
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 10/176 (5%)
Query: 150 AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLK 209
AV + + H LE G+ CI +PC+ SH + + + SIP +H+ K L + K
Sbjct: 63 AVYERMLHDCHLLESCGSCCIAIPCNTSHYFADRLQKEISIPIIHMPRETVKRLVKTNHK 122
Query: 210 PLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDME 269
++ +LATD T+ G Y+ +++ G + PD A ++ ++ I R +
Sbjct: 123 --------KVAILATDGTIMTGVYRREIEAAGMQAWQPD-AEIQKKVMSLIYDEIKRGEK 173
Query: 270 GARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTW 325
G R+ + + + I+G E+ V + L ID M+ LA + +
Sbjct: 174 GNRHTFAAIDRAVRDAGCDCAILGCTEL-SVYREYHGLPSFYIDAMEVLAEECIRF 228
>gi|160937014|ref|ZP_02084377.1| hypothetical protein CLOBOL_01902 [Clostridium bolteae ATCC
BAA-613]
gi|158439915|gb|EDP17663.1| hypothetical protein CLOBOL_01902 [Clostridium bolteae ATCC
BAA-613]
Length = 230
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 105/241 (43%), Gaps = 47/241 (19%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKS- 139
TIG+IGG+S ST+++ +NEE+ +HS K
Sbjct: 2 KTIGLIGGMSWESTVSYY----------------------QIINEEVKRRLGGLHSAKVI 39
Query: 140 -KTVQLDHIRGAVSQNLRHKRA--------FLEQAGARCIVMPCHISHAWHGDVSEGCSI 190
+V+ D I S K LE AGA I++ + H + I
Sbjct: 40 LYSVEFDEIEKCQSDGDWKKSGDILGTAAKSLEAAGADFILICTNTMHKVVPQIESMIQI 99
Query: 191 PFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
P +H+ + A+EL +++ ++G+L T T++ FY+++L ++G +V+ PD A
Sbjct: 100 PIIHIADATAQELLACQIR--------KVGLLGTKYTMTQDFYKQRLIDRGIDVITPDAA 151
Query: 251 TME---HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPL 307
++ +I + N R E +R ++ I L + + VI+G E+ ++ + D
Sbjct: 152 DIDIVNDIIFHELCVGNIR--EESRRQFQVVIDNLKAKGAHGVILGCTEIGLLIHQTDSS 209
Query: 308 L 308
L
Sbjct: 210 L 210
>gi|392309641|ref|ZP_10272175.1| aspartate racemase [Pseudoalteromonas citrea NCIMB 1889]
Length = 229
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 99/242 (40%), Gaps = 55/242 (22%)
Query: 84 TIGIIGGVSVSSTLNF-----------LGKLVWYSAK------DAEECPPFVVCNDPALN 126
TIG+IGG+S ST ++ LG L +SAK D E D L+
Sbjct: 3 TIGLIGGMSWESTASYYRIINQGIKARLGGL--HSAKIVLNSVDFAEVEAMQQAGDWQLS 60
Query: 127 EELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSE 186
+L S SL E AGA+CI++ + H D++
Sbjct: 61 ADLLKGSARSL-------------------------EAAGAQCIMICTNTMHKVADDIAA 95
Query: 187 GCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVL 246
S+P +H+ + A + L A ++ +L T T+S FY +L+ +G +V++
Sbjct: 96 AVSLPLIHIADATA--------QVLIAKGVTKVALLGTRFTMSETFYTSRLEQRGVDVLV 147
Query: 247 PDKATME--HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD 304
P A + H II L + R L I I L + V V++G E+ ++ +
Sbjct: 148 PTNAEQKVIHDIIYQQLCLGDIRDDSKRQYLDI-INSLQHQGVQGVVLGCTEIGLLISQQ 206
Query: 305 DP 306
D
Sbjct: 207 DT 208
>gi|440757101|ref|ZP_20936293.1| Aspartate racemase [Pantoea agglomerans 299R]
gi|436429171|gb|ELP26816.1| Aspartate racemase [Pantoea agglomerans 299R]
Length = 246
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 10/147 (6%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+AGA+ IV+ + H +S IP LH+ + + +++A + ++G+
Sbjct: 87 LERAGAQFIVLCTNTMHKVAAQISAATDIPLLHIADATGRRIQQAGVH--------KVGL 138
Query: 222 LATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPTIEALNHRDME-GARNLLRIGI 279
LAT T+ FY+ +L Q G EV+ PD+A V + L ++ +R R +
Sbjct: 139 LATRFTMEQDFYRGRLHEQFGLEVITPDEADRLFVHEVIYQELCLGEINPASRRRYREIM 198
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDP 306
Q L+ + A+I+G E+ ++ D
Sbjct: 199 QRLVAQGAEAIILGCTEITLLVDATDA 225
>gi|228941934|ref|ZP_04104478.1| amino-acid racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228974865|ref|ZP_04135427.1| amino-acid racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228981458|ref|ZP_04141756.1| amino-acid racemase [Bacillus thuringiensis Bt407]
gi|384188830|ref|YP_005574726.1| aspartate racemase [Bacillus thuringiensis serovar chinensis CT-43]
gi|410677153|ref|YP_006929524.1| putative amino-acid racemase RacX [Bacillus thuringiensis Bt407]
gi|452201231|ref|YP_007481312.1| Aspartate racemase [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
gi|228778283|gb|EEM26552.1| amino-acid racemase [Bacillus thuringiensis Bt407]
gi|228784869|gb|EEM32886.1| amino-acid racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228817767|gb|EEM63848.1| amino-acid racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326942539|gb|AEA18435.1| aspartate racemase [Bacillus thuringiensis serovar chinensis CT-43]
gi|409176282|gb|AFV20587.1| putative amino-acid racemase RacX [Bacillus thuringiensis Bt407]
gi|452106624|gb|AGG03564.1| Aspartate racemase [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
Length = 224
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 108/252 (42%), Gaps = 37/252 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
IGI+ G+ ST F+ +V Y AK + P ++ + P F+ +
Sbjct: 2 IGILAGMGPKSTGPFVDTVVARCQTIYGAKHDMDFPHMMIYSCPTP----FYMD-RPIDH 56
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+T++ I GA LE G I MPC+ +H + ++ SIP L++ +
Sbjct: 57 ETMKKAIIEGAQK---------LESTGVDFIAMPCNTAHLYFEELQRSLSIPILNIVDET 107
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+ + E + ++ +LAT+AT+ AG YQ + + E + +K + +I
Sbjct: 108 LQAIPE---------NTKKVALLATEATVQAGIYQNGIAKRNIEYIHHEK--WQEMINQI 156
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALA 319
I + ++E AR L + L L V+ II ++ V +D +D LA
Sbjct: 157 ITYIKSGEVEEARELWN-ALVLQLKDEVDTAIIACTDLNVVANED------FVDSAQCLA 209
Query: 320 RSTVTWARSNKK 331
+ V SNKK
Sbjct: 210 EAVVEMYLSNKK 221
>gi|228948505|ref|ZP_04110786.1| amino-acid racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228811185|gb|EEM57525.1| amino-acid racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
Length = 224
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 43/253 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPA---LNEELFHASVHS 136
IGI+ G+ ST F+ +V Y AK + P ++ + P ++ + HA++
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHAAM-- 59
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
K + I GA LE GA I MPC+ +H + ++ + SIP L++
Sbjct: 60 --KKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQQSLSIPILNIV 104
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
+ K + E + R+ +LAT+AT+ AG YQ+ + + E + ++ + I
Sbjct: 105 DETLKAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHYEQ--WQESI 153
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I + ++E AR L + L L V+ II ++ V +D +D
Sbjct: 154 NQIITYIKSGEVEEARELWS-ALVLQLKDEVDTAIIACTDLNVVASED------FVDSAQ 206
Query: 317 ALARSTVTWARSN 329
LA++ V N
Sbjct: 207 CLAKAVVRMYVEN 219
>gi|345888184|ref|ZP_08839296.1| hypothetical protein HMPREF0178_02070 [Bilophila sp. 4_1_30]
gi|345041004|gb|EGW45208.1| hypothetical protein HMPREF0178_02070 [Bilophila sp. 4_1_30]
Length = 238
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 106/255 (41%), Gaps = 40/255 (15%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL--FHAS---VHSL 137
TIG+IGG+S ST+ + + + N + E L FH++ +HS+
Sbjct: 2 KTIGLIGGMSWESTVTY-----------------YRIIN-RLVQERLGGFHSAKCILHSV 43
Query: 138 KSKTVQLDHIRGAVSQN---LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH 194
++ G ++ L LE+AGA C+++ + H V S+P LH
Sbjct: 44 DFHEIEACQRAGDWERSGELLAEAARGLERAGADCVLICTNTMHKVADAVQAATSLPLLH 103
Query: 195 VGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD---KAT 251
+ E A EL+ A + +G+L T T+ FY KL +G V++P+ +A
Sbjct: 104 IAELTADELEAAGVST--------VGLLGTRYTMEQDFYTRKLVERGITVLIPEEDGRAF 155
Query: 252 MEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC 311
+ VI E E +R I L R VI+G E+ G+L + +
Sbjct: 156 VNRVIFD--ELCLGTVSESSRRAFAAIIGGLTARGAQGVILGCTEI-GLLVRPGDTSARL 212
Query: 312 IDPMDALARSTVTWA 326
D + AR +A
Sbjct: 213 FDTTEIHARRAALYA 227
>gi|158421727|ref|YP_001523019.1| aspartate racemase [Azorhizobium caulinodans ORS 571]
gi|158328616|dbj|BAF86101.1| aspartate racemase [Azorhizobium caulinodans ORS 571]
Length = 232
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 15/148 (10%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ GA +++ + H G+V+ +P LH+ + A +K A L R+G+
Sbjct: 73 LERGGADVLLICSNTMHRMAGEVAGAVGVPLLHIADPTAARVKAAGL--------TRVGL 124
Query: 222 LATDATLSAGFYQEKL-QNQGFEVVLP---DKATMEHVIIPTIEALNHRDMEGARNLLRI 277
L T T+ FY+ +L G +V++P D+A + +I E + R +R R
Sbjct: 125 LGTAFTMEQDFYKGRLAARHGLDVLVPEAEDRAVVHRIIYE--ELVQGRIEAASREAYRA 182
Query: 278 GIQLLLVRAVNAVIIGSDE-MQGVLPKD 304
I L+ R AVI+G E M V P+D
Sbjct: 183 VIARLVARGAEAVILGCTEIMLLVKPED 210
>gi|221315719|ref|ZP_03597524.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|143291|gb|AAA22641.1| amino acid racemase [Bacillus subtilis]
gi|407962278|dbj|BAM55518.1| amino acid racemase [Bacillus subtilis BEST7613]
Length = 230
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 34/172 (19%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPALNEELFHASV---HS 136
IGI+ G+ ST F+ K++ Y A + + P ++ + P F+A H
Sbjct: 5 IGILAGMGPKSTSPFIDKVIDYCQKLYGASNDIDYPHMMIYSCPTP----FYADRPIDHD 60
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
K + I GAV LE+ G I +PC+ +H ++ ++ + S+P LH+
Sbjct: 61 EMKKAI----IDGAVK---------LEKTGVDFIALPCNTAHVYYEEIQQALSVPMLHIV 107
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
E KE+ P A V VL T+ T+ + YQ+ L+ G EV+ D
Sbjct: 108 EETIKEI------PHPAKKAV---VLGTEPTIQSAIYQKVLKGNGQEVIHKD 150
>gi|228955032|ref|ZP_04117048.1| amino-acid racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228804658|gb|EEM51261.1| amino-acid racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 235
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 110/255 (43%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 13 IGILAGMGPKSTGPFVDTVVAGCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 69
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ SIP L++ +
Sbjct: 70 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQRSLSIPILNIVD 116
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHVI 256
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K TM + I
Sbjct: 117 ETLQAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQI 167
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I I++ ++E AR L + + L V+ II ++ V +D +D
Sbjct: 168 IMYIKS---GEVEEARKLWS-ALIVQLKDEVDTAIIACTDLNVVASED------FVDSSQ 217
Query: 317 ALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 218 CLAKAVVRMYLSNIK 232
>gi|423426890|ref|ZP_17403921.1| aspartate racemase [Bacillus cereus BAG3X2-2]
gi|423502559|ref|ZP_17479151.1| aspartate racemase [Bacillus cereus HD73]
gi|449091718|ref|YP_007424159.1| aspartate racemase [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|401109805|gb|EJQ17723.1| aspartate racemase [Bacillus cereus BAG3X2-2]
gi|402460400|gb|EJV92122.1| aspartate racemase [Bacillus cereus HD73]
gi|449025475|gb|AGE80638.1| aspartate racemase [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 224
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 110/255 (43%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAGCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQRSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHVI 256
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K TM + I
Sbjct: 106 ETLQAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQI 156
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I I++ ++E AR L + + L V+ II ++ V +D +D
Sbjct: 157 IMYIKS---GEVEEARKLWS-ALIVQLKDEVDTAIIACTDLNVVASED------FVDSSQ 206
Query: 317 ALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 207 CLAKAVVRMYLSNIK 221
>gi|383455230|ref|YP_005369219.1| aspartate racemase [Corallococcus coralloides DSM 2259]
gi|380734953|gb|AFE10955.1| aspartate racemase [Corallococcus coralloides DSM 2259]
Length = 230
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 9/137 (6%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+AGA +V+ + H D++ IPFLH+ E A+E+ A +K +G+
Sbjct: 71 LERAGAEALVLCTNTMHKLAPDIASAIRIPFLHIAEATAQEVLRANVKT--------VGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDME-GARNLLRIGIQ 280
L T T+ FY+ +L G EV++P + V + L ++ G+R + ++
Sbjct: 123 LGTRYTMEQDFYKGRLAGSGLEVLVPTDEERQGVHDVIYQELCLGQVKAGSRERYQRIME 182
Query: 281 LLLVRAVNAVIIGSDEM 297
L+ R +I+G E+
Sbjct: 183 GLVRRGAQGIILGCTEI 199
>gi|334337242|ref|YP_004542394.1| aspartate racemase [Isoptericola variabilis 225]
gi|334107610|gb|AEG44500.1| aspartate racemase [Isoptericola variabilis 225]
Length = 238
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 36/252 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G+IGGV +T FL ++V + A+ ++ VV N HA++ +
Sbjct: 8 VGVIGGVGPLATAYFLQRVVQRTRAERDQDHVDMVVLN---------HATIPD------R 52
Query: 144 LDHIRGAVSQN----LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
D + G + L LE G +VMPC+ +H + V + ++PF+ + +
Sbjct: 53 TDFVLGRSDADPGPVLARDARRLEDFGVSFLVMPCNTAHYFTQQVLDAITVPFVSIVDVT 112
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD---KATMEHVI 256
+ ++ LE +G+LAT T+++ Y + G V+ P+ + + VI
Sbjct: 113 VAASRR-RVPGLET-----VGLLATAGTVASRVYDDAFAQHGISVITPEPDGQDVVNRVI 166
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK--CIDP 314
++A D + LR L+ R + V++G E+ V D LL + +D
Sbjct: 167 YEQVKAGRPSDPDA----LRTVAGRLVERGASVVVLGCTELS-VAAVDHGLLDEPPFLDS 221
Query: 315 MDALARSTVTWA 326
MD L R+T+ A
Sbjct: 222 MDELVRATIEAA 233
>gi|219667320|ref|YP_002457755.1| aspartate racemase [Desulfitobacterium hafniense DCB-2]
gi|219537580|gb|ACL19319.1| aspartate racemase [Desulfitobacterium hafniense DCB-2]
Length = 231
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 103/232 (44%), Gaps = 35/232 (15%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAK------DAEECPPFVVCNDPALNEELFHASVHSL 137
TIG+IGG+S S+ + +L+ K + +C + SV
Sbjct: 3 TIGLIGGMSWESSAEYY-RLINEEVKRRLGGLHSAQCILY---------------SVDFA 46
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
+ +T Q G ++ L + LE AGA IV+ + H ++ G IP LH+ +
Sbjct: 47 EIETCQSSGEWGKAAEILANAARSLEAAGAEFIVLCTNTMHKVADEIQAGLQIPLLHIAD 106
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEH 254
A++ + ++ IG+L T T+ FY +L+ QG +V+ P DKA +
Sbjct: 107 MTAQQALTSNIRT--------IGLLGTRYTMEQEFYSSRLEAQGIKVLTPEEGDKAVVNE 158
Query: 255 VIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDP 306
VI + L + E +RN + I L+ + +++G E+ ++ ++D
Sbjct: 159 VIYQEL-CLGIINQE-SRNQFKRIIADLVEQGAQGIVLGCTEIGLLIKQEDS 208
>gi|380509595|ref|ZP_09853002.1| putative resistance protein [Xanthomonas sacchari NCPPB 4393]
Length = 229
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 165 AGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLAT 224
GA +V+ + H ++ +P LH+ + A L+ A + VR+G+L T
Sbjct: 74 GGADFLVLCTNTMHCVADAIAAAVPLPLLHIADATADALQAAGI--------VRVGLLGT 125
Query: 225 DATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNL-LRIGIQLLL 283
T+ FY+E+LQ +GFEV++PD E V E L ++ + L R I L
Sbjct: 126 RFTMEQAFYRERLQRRGFEVLIPDAPAREDVHRIIYEELCQGVVQTSSRLRYREVIAGLQ 185
Query: 284 VRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA---LARSTVTWARS 328
+ AVI+G E+ G+L + P DA L +TV AR+
Sbjct: 186 AQGAEAVILGCTEI-GLL----------VGPADAAVPLFDTTVLHARA 222
>gi|427421989|ref|ZP_18912172.1| aspartate racemase [Leptolyngbya sp. PCC 7375]
gi|425757866|gb|EKU98720.1| aspartate racemase [Leptolyngbya sp. PCC 7375]
Length = 267
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 109/262 (41%), Gaps = 32/262 (12%)
Query: 75 PDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDA----EECPPFVVCNDPALNEELF 130
P + Q GI+GG+ + + F +L+ +SA+ +E P +++
Sbjct: 6 PKNSQRQVKLPGILGGLGPLAHIEFEQRLLHHSARRGTQYDQEHPNWLLL---------- 55
Query: 131 HASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSI 190
S S +T L I L LE GA +V+ C+ +H ++ V I
Sbjct: 56 --SAASTPDRTQSLAGIGPDCVPYLVRSACLLEAMGAGFLVVTCNTAHGFYHTVQAQLDI 113
Query: 191 PFLHVGECVAKELKEAKLKPLEAGSGVR-IGVLATDATLSAGFYQEKLQNQGFEVVLPDK 249
P+LH+ E A + A+ P VR +GVLATD TL + Y L G +LP
Sbjct: 114 PWLHMMEATAAYI--AQCFP-----NVRQVGVLATDGTLRSQLYTTSLAQYGISPILPPL 166
Query: 250 AT------MEHVIIPT--IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL 301
+ ME + P I+A + A L + + L + + +I G E+ L
Sbjct: 167 GSPIQHRIMEAIYSPDWGIKATGAWVSDIALIELIVASRWLAAQGADLLIAGCTEISIGL 226
Query: 302 PKDDPLLKKCIDPMDALARSTV 323
+ L IDP+D +A T+
Sbjct: 227 AQLSQLPINWIDPLDIMANLTL 248
>gi|149913430|ref|ZP_01901963.1| arginine/ornithine transport system ATPase [Roseobacter sp.
AzwK-3b]
gi|149812550|gb|EDM72379.1| arginine/ornithine transport system ATPase [Roseobacter sp.
AzwK-3b]
Length = 226
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 92/210 (43%), Gaps = 28/210 (13%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLV-WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
T+GI+GG+ +T+ + K++ AKD + P +V +P + S+
Sbjct: 2 KTVGILGGMGPEATILLMQKVLDAVPAKDDADHIPLIVHQNP------------QVPSRI 49
Query: 142 VQLDHIRGAVSQNLRHKRAF-LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
L G + K A LE AGA + MPC+ +H + V E +PFL + E A
Sbjct: 50 KALIEGTGEDPGPVLAKMARDLEAAGAAALAMPCNTAHHYAKAVEEASDLPFLDMLELTA 109
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFE-VVLPDKATMEHVIIPT 259
EL A + R+G+LA+ AT G ++ QG E V LPD + + +I
Sbjct: 110 AELARAGAR--------RVGLLASPATRLTGVFEAPFAAQGLEPVTLPDDSGLLAIIRAV 161
Query: 260 -----IEALNHRDMEGARNLLRIGIQLLLV 284
E L R E A L+ G LLV
Sbjct: 162 KAGEDPEGLAPRLAEQANALVAEGADHLLV 191
>gi|325262389|ref|ZP_08129126.1| putative aspartate racemase [Clostridium sp. D5]
gi|324032221|gb|EGB93499.1| putative aspartate racemase [Clostridium sp. D5]
Length = 230
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 38/181 (20%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS--K 140
TIG+IGG+S ST+ P + + N+ N +HS K
Sbjct: 2 KTIGLIGGMSWESTV-----------------PYYQIINEEVKNR---LGGLHSAKVILY 41
Query: 141 TVQLDHIRGAVSQN--------LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+V+ D I S L LE AGA I++ + H + IP
Sbjct: 42 SVEFDEIEKCQSNGDWEKSGDILGEAAKGLEAAGADFILICTNTMHKVAPQIQSMIHIPI 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
+H+ + A+EL++ +++ R G+L T T++ FY+++L ++G +VV+PD +
Sbjct: 102 IHIADATAQELEKCQIR--------RAGLLGTKYTMTQAFYKQRLIDRGIDVVIPDGEDI 153
Query: 253 E 253
+
Sbjct: 154 D 154
>gi|299536870|ref|ZP_07050177.1| hypothetical protein BFZC1_12648 [Lysinibacillus fusiformis ZC1]
gi|424740022|ref|ZP_18168433.1| hypothetical protein C518_4255 [Lysinibacillus fusiformis ZB2]
gi|298727694|gb|EFI68262.1| hypothetical protein BFZC1_12648 [Lysinibacillus fusiformis ZC1]
gi|422946345|gb|EKU40757.1| hypothetical protein C518_4255 [Lysinibacillus fusiformis ZB2]
Length = 232
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 42/178 (23%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKSK 140
TIG+IGG+S S+ + +NE++ H +HS K
Sbjct: 2 KTIGLIGGMSWESSAEYY----------------------RLINEQVKHRLGGLHSAKCI 39
Query: 141 TV-----QLDHIRG-----AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSI 190
Q++H + + L LE+AGA I++ + H + +I
Sbjct: 40 LFSVDFQQIEHFQANAEWDKAGEVLAQAAQALERAGAELIIICTNTMHKVIDVIEPAITI 99
Query: 191 PFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
P LH+ + AK++KEA L+ +I +L T T+ FY+ ++++ G EV++PD
Sbjct: 100 PILHIADATAKQIKEAGLQ--------KIALLGTKYTMEQAFYKARVESFGIEVIVPD 149
>gi|373494254|ref|ZP_09584859.1| hypothetical protein HMPREF0380_00497 [Eubacterium infirmum F0142]
gi|371968751|gb|EHO86205.1| hypothetical protein HMPREF0380_00497 [Eubacterium infirmum F0142]
Length = 237
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELF-HASVHSLKSKTVQ 143
+GIIGG+ ++ F + S DA C+ L+ L HAS+ +
Sbjct: 2 LGIIGGMGPGASALFYDMI--RSKTDAG-------CDQENLDLILLSHASMPDRTEAILS 52
Query: 144 LDHIR-GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
D R A+ L FL+ AG I + C+ +H + + IPF+H+ +E
Sbjct: 53 KDEPRIRALRDKLLADAIFLQNAGCTAIAVTCNTAHCFVNMIEHEVEIPFIHM----IRE 108
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
EA SG R+ +LATD T+ YQ++L QG ++P
Sbjct: 109 TAEAMASEF---SGKRVAILATDGTIETKLYQDELSKQGVIAIIP 150
>gi|228936066|ref|ZP_04098875.1| amino-acid racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228823613|gb|EEM69436.1| amino-acid racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
Length = 224
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 105/254 (41%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAGCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ + SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQQSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
K + E + R+ +LAT+ T+ AG YQE + + E + +K + +I
Sbjct: 106 ETLKAIPE---------TAKRVALLATETTVQAGIYQEGIIKRNIEYIHHEK--WQDMIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E A L + L L V+ II ++ V +D +D
Sbjct: 155 QIITCIKSGEIEKAHELWNTLV-LQLRDEVDTAIIACTDLNVVASED------FVDSSQC 207
Query: 318 LARSTVTWARSNKK 331
LA + V SN K
Sbjct: 208 LAEAVVRMYLSNTK 221
>gi|304394921|ref|ZP_07376805.1| aspartate racemase [Pantoea sp. aB]
gi|304357174|gb|EFM21537.1| aspartate racemase [Pantoea sp. aB]
Length = 230
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 10/147 (6%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+AGA+ IV+ + H +S IP LH+ + + +++A + ++G+
Sbjct: 71 LERAGAQFIVLCTNTMHKVAAQISAATDIPLLHIADATGRRIQQAGVH--------KVGL 122
Query: 222 LATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPTIEALNHRDME-GARNLLRIGI 279
LAT T+ FY+ +L Q G EV+ PD+A V + L ++ +R R +
Sbjct: 123 LATRFTMEQDFYRGRLHEQFGLEVITPDEADRLFVHEVIYQELCLGEINPASRRRYREIM 182
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDP 306
Q L+ + A+I+G E+ ++ D
Sbjct: 183 QRLVAQGAEAIILGCTEITLLVDATDA 209
>gi|269977467|ref|ZP_06184439.1| aspartate racemase [Mobiluncus mulieris 28-1]
gi|269934383|gb|EEZ90945.1| aspartate racemase [Mobiluncus mulieris 28-1]
Length = 237
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 25/247 (10%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
T+G++GG+ +T+ FL +V ++ +++ N +L S +T
Sbjct: 4 TVGVLGGLGPLATVYFLKTVVDFTQAQSDQD-----------NVDLIITQHSSTPDRTAA 52
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L + + + L+ AGA +V+PC+ + + V E I +++ V + +
Sbjct: 53 LLDGGESPAPIMAADARKLQDAGAEFLVIPCNTATNFLQAVVEAVDIEVVNI---VTETV 109
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
E K AG R+ ++AT+ T+++ YQE LQ G+E ++P A ++ I I
Sbjct: 110 AEIGRK--NAGGIKRVAIMATEGTIASEIYQETLQLAGYEALVP-SAQLQKEISGIIYGY 166
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD----DPLLKKCIDPMDALA 319
+R L I L +AVI G E+ V+ KD DP + +D + LA
Sbjct: 167 VKAGQPVSRELFFGIINKLRQNEADAVICGCTELS-VVYKDLQITDPTI---VDSLATLA 222
Query: 320 RSTVTWA 326
R TV A
Sbjct: 223 RLTVIKA 229
>gi|229152950|ref|ZP_04281132.1| amino-acid racemase [Bacillus cereus m1550]
gi|228630563|gb|EEK87210.1| amino-acid racemase [Bacillus cereus m1550]
Length = 235
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 110/252 (43%), Gaps = 37/252 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
IGI+ G+ ST F+ +V Y AK + P ++ + P F+ +
Sbjct: 13 IGILAGMGPKSTGPFVDTVVAMCQTIYGAKHDMDFPHMMIYSCPTP----FYMD-RPIDH 67
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+T++ I GA LE G I MPC+ +H + ++ SIP L++ +
Sbjct: 68 ETMKKAIIEGAQK---------LESTGVDFIAMPCNTAHLYFEELQRSLSIPILNIVDET 118
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
K + E + R+ +LAT+AT+ AG YQ+ + + E + +K + +I
Sbjct: 119 LKTIPE---------NTKRVALLATEATIQAGIYQDGIIKRNIEYIHHEK--WQEMISQI 167
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALA 319
I ++ ++E AR L + L L V+ II ++ V ++ +D LA
Sbjct: 168 ITSIKSGEVEEARELWNTLV-LQLKDEVDTAIIACTDLNVVASEN------FVDSSQCLA 220
Query: 320 RSTVTWARSNKK 331
++ V SN K
Sbjct: 221 KAVVRMYLSNIK 232
>gi|158319598|ref|YP_001512105.1| aspartate racemase [Alkaliphilus oremlandii OhILAs]
gi|158139797|gb|ABW18109.1| aspartate racemase [Alkaliphilus oremlandii OhILAs]
Length = 234
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 113/247 (45%), Gaps = 27/247 (10%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
T+GIIGG+ +T N K+V + AK ++ ++ N+ A+ +T
Sbjct: 4 TLGIIGGMGPLATANLFNKIVLKTEAKSDQDHIHILIDNNIAI------------PDRTA 51
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
L + L LE GA ++MPC+ +H ++ ++ + +I FL++ E
Sbjct: 52 YLVGDGDNPLEELVKSAKRLENMGADFLIMPCNTAHYFYQEIKDVINIAFLNMIEETVMH 111
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV--IIPTI 260
+KE + + ++G+LATD T+ + Y + E++ D+ + + + II ++
Sbjct: 112 IKE------KYPTSKKVGLLATDGTVQSKIYDLYFNKENIEMINLDENSQKSIMNIIYSV 165
Query: 261 EA-LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALA 319
+A N +E + I L + + VI+G E+ V K D L +D ++ +
Sbjct: 166 KAGKNQIPLED----IYSAIDELKGKGADVVILGCTELSVVNEKHD-LKGNIVDALNIIT 220
Query: 320 RSTVTWA 326
+ + +A
Sbjct: 221 ETAIQFA 227
>gi|217962242|ref|YP_002340812.1| putative amino-acid racemase [Bacillus cereus AH187]
gi|229141490|ref|ZP_04270026.1| amino-acid racemase [Bacillus cereus BDRD-ST26]
gi|375286756|ref|YP_005107195.1| aspartate racemase family protein [Bacillus cereus NC7401]
gi|423355239|ref|ZP_17332864.1| aspartate racemase [Bacillus cereus IS075]
gi|423373290|ref|ZP_17350629.1| aspartate racemase [Bacillus cereus AND1407]
gi|423570979|ref|ZP_17547224.1| aspartate racemase [Bacillus cereus MSX-A12]
gi|217067288|gb|ACJ81538.1| probable amino-acid racemase [Bacillus cereus AH187]
gi|228641975|gb|EEK98270.1| amino-acid racemase [Bacillus cereus BDRD-ST26]
gi|358355283|dbj|BAL20455.1| aspartate racemase family protein [Bacillus cereus NC7401]
gi|401084356|gb|EJP92603.1| aspartate racemase [Bacillus cereus IS075]
gi|401096785|gb|EJQ04823.1| aspartate racemase [Bacillus cereus AND1407]
gi|401202961|gb|EJR09809.1| aspartate racemase [Bacillus cereus MSX-A12]
Length = 224
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 41/252 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ + SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQQSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
K + E + R+ +LAT+AT+ AG YQ+ + + E + +K + +I
Sbjct: 106 ETLKAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHHEK--WQDMIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + +E AR L + L L V+ II ++ V +D +D
Sbjct: 155 QIITYIKSGKVEEARELWN-ALVLQLREEVDTAIIACTDLNVVAIED------FVDSSQC 207
Query: 318 LARSTVTWARSN 329
LA++ V N
Sbjct: 208 LAKAVVRMYVEN 219
>gi|16080496|ref|NP_391323.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. 168]
gi|221311392|ref|ZP_03593239.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. 168]
gi|221320634|ref|ZP_03601928.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. JH642]
gi|221324919|ref|ZP_03606213.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. SMY]
gi|402777606|ref|YP_006631550.1| amino acid racemase [Bacillus subtilis QB928]
gi|452913706|ref|ZP_21962334.1| aspartate racemase family protein [Bacillus subtilis MB73/2]
gi|226693554|sp|P32960.2|RACX_BACSU RecName: Full=Probable amino-acid racemase
gi|1945684|emb|CAB08017.1| amino acid racemase [Bacillus subtilis]
gi|2635956|emb|CAB15448.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. 168]
gi|402482785|gb|AFQ59294.1| Amino acid racemase [Bacillus subtilis QB928]
gi|407966292|dbj|BAM59531.1| amino acid racemase [Bacillus subtilis BEST7003]
gi|452118734|gb|EME09128.1| aspartate racemase family protein [Bacillus subtilis MB73/2]
Length = 227
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 34/172 (19%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPALNEELFHASV---HS 136
IGI+ G+ ST F+ K++ Y A + + P ++ + P F+A H
Sbjct: 2 IGILAGMGPKSTSPFIDKVIDYCQKLYGASNDIDYPHMMIYSCPTP----FYADRPIDHD 57
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
K + I GAV LE+ G I +PC+ +H ++ ++ + S+P LH+
Sbjct: 58 EMKKAI----IDGAVK---------LEKTGVDFIALPCNTAHVYYEEIQQALSVPMLHIV 104
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
E KE+ P A V VL T+ T+ + YQ+ L+ G EV+ D
Sbjct: 105 EETIKEI------PHPAKKAV---VLGTEPTIQSAIYQKVLKGNGQEVIHKD 147
>gi|225182088|ref|ZP_03735517.1| aspartate racemase [Dethiobacter alkaliphilus AHT 1]
gi|225167207|gb|EEG76029.1| aspartate racemase [Dethiobacter alkaliphilus AHT 1]
Length = 230
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL--FHAS---VHSLK 138
TIG+IGG+S S+L + + + N+ + L H++ ++S++
Sbjct: 3 TIGLIGGMSWESSLEY-----------------YRIINE-GVKSRLGGLHSAQCILYSVE 44
Query: 139 SKTVQLDHIRG---AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
++L +G +SQ L LE AGA I++ + H + ++ I LH+
Sbjct: 45 FAEIELYMRKGEWEKISQALIKVAGKLESAGADFILLCTNTMHKFAEEIQGAIDIELLHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATM 252
E A E+ A +K ++G+L T T+ FY + LQ G +VV+P D+
Sbjct: 105 AEATAVEVNRANIK--------KVGLLGTRPTMEQDFYTKTLQQNGIQVVIPSHTDREIT 156
Query: 253 EHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL-PKDDPL 307
+VI + L E +I I L+ + +I+G E+ ++ P+D P+
Sbjct: 157 HNVIFQEL-CLGIITPESKNEYKKI-INGLIKQGAEGIILGCTEIPLLIKPEDSPV 210
>gi|307700261|ref|ZP_07637301.1| aspartate racemase [Mobiluncus mulieris FB024-16]
gi|307614472|gb|EFN93701.1| aspartate racemase [Mobiluncus mulieris FB024-16]
Length = 237
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 25/247 (10%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
T+G++GG+ +T+ FL +V ++ +++ N +L S +T
Sbjct: 4 TVGVLGGLGPLATVYFLKTVVDFTQAQSDQD-----------NVDLIITQHSSTPDRTAA 52
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L + + + L+ AGA +V+PC+ + + V E I +++ VA+ +
Sbjct: 53 LLDGGESPAPIMAADARKLQDAGAEFLVIPCNTATNFLQAVVEAVDIEVVNI---VAETV 109
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
E K AG R+ ++AT+ T+++ YQE LQ G+E ++P ++ I I
Sbjct: 110 AEIGRK--NAGGIKRVAIMATEGTIASEIYQETLQLAGYEALVP-SVQLQKEISGIIYGY 166
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD----DPLLKKCIDPMDALA 319
+R L I L +AVI G E+ V+ KD DP + +D + LA
Sbjct: 167 VKAGQPVSRELFFGIINKLRQNEADAVICGCTELS-VVYKDLQITDPTI---VDSLATLA 222
Query: 320 RSTVTWA 326
R TV A
Sbjct: 223 RLTVIKA 229
>gi|404367478|ref|ZP_10972841.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185]
gi|313688570|gb|EFS25405.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185]
Length = 235
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 119/258 (46%), Gaps = 36/258 (13%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPAL--NEELFHASVHSLKSK 140
+GI+GG+ +T++ K+V + AK E+ +V N+P + ++ S +
Sbjct: 5 VVGILGGMGPEATIDLFAKIVEETHAKCDEDHLRIIVDNNPKMPSRQDAIMKGTESPVAA 64
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
V A ++NL+ +AGA I++ + +H ++ +V+ IPFLH+ +
Sbjct: 65 MV-------ATAENLK-------KAGADFIIIGANTAHYFYDEVASQVDIPFLHIIDEAV 110
Query: 201 KELKEAKLKPLEAGSGV-RIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
KE+ + G+ ++GV+AT+A + Y + G EV+ K +++ + T
Sbjct: 111 KEM-------MRQVPGIKKVGVMATNAAVKIKLYDKCCAKFGIEVIAA-KEEVQNKVHDT 162
Query: 260 I-----EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDP 314
I + ++++ A + I+ A+I+G E+ +L K IDP
Sbjct: 163 IFDFKYNGVTEKNVKDATDCAEYFIE----NGAEALIMGCTEIPIIL-KGKSFTVPLIDP 217
Query: 315 MDALARSTVTWARSNKKL 332
D + + V +A++ +L
Sbjct: 218 NDIIGKVAVAYAKNKYEL 235
>gi|15674208|ref|NP_268383.1| aspartate racemase [Lactococcus lactis subsp. lactis Il1403]
gi|281492904|ref|YP_003354884.1| aspartate racemase [Lactococcus lactis subsp. lactis KF147]
gi|385831807|ref|YP_005869620.1| aspartate racemase [Lactococcus lactis subsp. lactis CV56]
gi|418038843|ref|ZP_12677159.1| Aspartate racemase [Lactococcus lactis subsp. cremoris CNCM I-1631]
gi|12725293|gb|AAK06324.1|AE006451_5 aspartate racemase [Lactococcus lactis subsp. lactis Il1403]
gi|281376556|gb|ADA66042.1| Aspartate racemase [Lactococcus lactis subsp. lactis KF147]
gi|326407815|gb|ADZ64886.1| aspartate racemase [Lactococcus lactis subsp. lactis CV56]
gi|354692850|gb|EHE92655.1| Aspartate racemase [Lactococcus lactis subsp. cremoris CNCM I-1631]
Length = 240
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 39/201 (19%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
N I+GG+ +T +F+ L + A ++ ++V N HA++
Sbjct: 3 NFFTILGGMGTLATESFIHTLNERTEAYRDQDYLNYIVVN---------HATIPD----- 48
Query: 142 VQLDHIRGAVSQNLRHKR----AFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG- 196
+ D+I+ +N K Q + V+PC+ +H + ++ + IP LH+
Sbjct: 49 -RTDYIKNPSLENPEEKLIDDIKIHSQLSPKFFVVPCNTAHYYFDEMQKATEIPILHMPR 107
Query: 197 ---ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
+ ++ +AK R+ VLAT+ T+ G Y++ L+ QG+E V+PD E
Sbjct: 108 IAVDSISHHFPKAK----------RVAVLATEGTILTGVYRKALEEQGYEAVIPDDQLQE 157
Query: 254 HVIIPTIEALNHRDMEGARNL 274
V L +++++ RNL
Sbjct: 158 KV-----NRLIYQEVKENRNL 173
>gi|304436557|ref|ZP_07396527.1| aspartate racemase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304370427|gb|EFM24082.1| aspartate racemase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 255
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 40/183 (21%)
Query: 84 TIGIIGGVSVSSTLNF-----------LGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG+IGG+S ST+ + LG L +SAK C + V D E + A
Sbjct: 28 TIGLIGGMSWESTVTYYQVINETIKKQLGGL--HSAK----CILYSVDFDEI---EKYQA 78
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
S KS V L LE+AGA IV+ + H ++ IP
Sbjct: 79 SGEWDKSADV------------LSEAAQALERAGADYIVICTNTMHKVAPEIGRRIHIPI 126
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
LH+ + A +LK+ ++ ++G+L T T+ FY+ L QG EVV+P+ A +
Sbjct: 127 LHIADMTAVQLKKHGIR--------KVGLLGTKYTMQQDFYKNILIEQGIEVVIPNDAGV 178
Query: 253 EHV 255
+ V
Sbjct: 179 DIV 181
>gi|357386189|ref|YP_004900913.1| aspartate racemase [Pelagibacterium halotolerans B2]
gi|351594826|gb|AEQ53163.1| aspartate racemase [Pelagibacterium halotolerans B2]
Length = 228
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 26/227 (11%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIGIIGG+S ST + + +A+ + + P L + L A + +L++K
Sbjct: 2 KTIGIIGGMSWESTAQYYALINRETARRRGG-----LHSAPILIDSLDFAEIEALQAKAD 56
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
A + L LE AGA +++ + H D+ IP LH+ + A
Sbjct: 57 WT-----AAGERLAVSAQRLETAGADMLMLATNTMHIVVPDIEAATKIPLLHIADPTADA 111
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP--DKATMEHVIIPTI 260
L ++ G+ +G+L T T+ FY ++L+ + + ++P D+ ++ +I +
Sbjct: 112 L-------IDDGAET-VGLLGTRFTMEMDFYIDRLRQRSLDAIVPEVDRTNLDGIIYSQL 163
Query: 261 --EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
+N + +R + + I+ L R A+I+G E+ +L +D
Sbjct: 164 CRGIIN----DTSRGIYQDAIEKLSRRGAQAIILGCTELGLLLSDED 206
>gi|153947122|ref|YP_001400391.1| aspartate racemase family protein [Yersinia pseudotuberculosis IP
31758]
gi|152958617|gb|ABS46078.1| aspartate racemase family protein [Yersinia pseudotuberculosis IP
31758]
Length = 230
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L+ AGA IV+ + H D+ C +P LH+ + A ++K+ + +IG+
Sbjct: 71 LKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADATAVQIKQQGID--------KIGL 122
Query: 222 LATDATLSAGFYQEKL-QNQGFEVVLPDKATMEHVIIPTIEALNHRDM-EGARNLLRIGI 279
L T T+ FY+ +L + G EV+ PD E V E L + E +R+ R I
Sbjct: 123 LGTRYTMEQDFYRGRLTEKHGIEVITPDDTDREAVNRIIYEELCLGIISETSRDAYRRVI 182
Query: 280 QLLLVRAVNAVIIGSDEM 297
+ L + V +I G E+
Sbjct: 183 KKLEAQGVQGIIFGCTEI 200
>gi|423512859|ref|ZP_17489390.1| aspartate racemase [Bacillus cereus HuA2-1]
gi|423670323|ref|ZP_17645352.1| aspartate racemase [Bacillus cereus VDM034]
gi|423673469|ref|ZP_17648408.1| aspartate racemase [Bacillus cereus VDM062]
gi|401297262|gb|EJS02874.1| aspartate racemase [Bacillus cereus VDM034]
gi|401310650|gb|EJS15963.1| aspartate racemase [Bacillus cereus VDM062]
gi|402447372|gb|EJV79225.1| aspartate racemase [Bacillus cereus HuA2-1]
Length = 224
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPA---LNEELFHASVHS 136
IGI+ G+ ST F+ +V Y AK + P ++ + P ++ + HA++
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAGCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHAAM-- 59
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
K + I GA +R LE G I MPC+ +H + ++ +IP L++
Sbjct: 60 --KKAI----IEGA-------QR--LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIV 104
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
+ K + E + R+ +LAT+AT+ AG YQ+ + + E + ++ + +I
Sbjct: 105 DETLKAIPE---------NTKRVALLATEATVQAGIYQDGITKRNIEYIHNEQ--WQEMI 153
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I + ++E AR L + + L L V+ II ++ V+ +D +D
Sbjct: 154 NQIITCIKGGEIEEARKLWSLLV-LQLKDEVDTAIIACTDLNVVVSED------FVDSAQ 206
Query: 317 ALARSTVTWARSNKK 331
LA + V SN K
Sbjct: 207 CLAEAVVRIYASNIK 221
>gi|390962038|ref|YP_006425872.1| putative aspartate racemase 1 [Thermococcus sp. CL1]
gi|390520346|gb|AFL96078.1| putative aspartate racemase 1 [Thermococcus sp. CL1]
Length = 226
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 20/221 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IGIIGG S +T + K + S + E P + EL S++ K
Sbjct: 4 IGIIGGTSPEATCYYYKKYLEISREKFE----------PYVFPELIIYSIN-FKEFIHNP 52
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+ G + +A LE+AGA I + + H DV ++P + + + + +E+K
Sbjct: 53 NGWEGRKEILINAAKA-LERAGAEIISLSANTPHIVFPDVQRTINVPMVSIIDALIEEMK 111
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALN 264
++ R+ +L T T++A FY+ L+ GFEVV P + M+ + E L
Sbjct: 112 RRGVR--------RVLLLGTKTTMTADFYKNALREAGFEVVTPSEEEMDELNRIITEELM 163
Query: 265 HRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
D ++ + + + VI+G E+ ++ + D
Sbjct: 164 FEDFTSRDWVIGLINNYIEKEGIEGVILGCTELPLIVKRGD 204
>gi|383755623|ref|YP_005434526.1| putative aspartate racemase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381367675|dbj|BAL84503.1| putative aspartate racemase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 236
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 113/250 (45%), Gaps = 30/250 (12%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
TIGI+GG+ +T++ + K++ + A+ +E P +V N+ ++ +T
Sbjct: 2 KTIGIMGGMGPMATVDLMRKIIMATPARCDQEHIPMLVDNN------------CTIPDRT 49
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+ + + + + L AGA I++ C+ +H + ++ +IP L + +
Sbjct: 50 RAIKGLGASPAPEMVKTAKRLMMAGADFIIIACNTAHYFLPEILPQITIPVLSIIDVTIA 109
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD---KATMEHVIIP 258
E + +G+LAT T+S G YQ+ L+ +G + + P + ++ +I
Sbjct: 110 SAWEKGYR--------SVGLLATSGTISTGLYQDGLEAKGIQCIAPSAEKQHLIDDLIYD 161
Query: 259 TIEALNH-RDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
+++ N D R LL+ + V+ A I+G E+ V L ID D
Sbjct: 162 GVKSTNKAYDTTAVRELLK----EMQVQGAEAFILGCTEVP-VAVDMYGLEGTFIDSTDE 216
Query: 318 LARSTVTWAR 327
LA++ V +A+
Sbjct: 217 LAKAAVKFAK 226
>gi|229198914|ref|ZP_04325604.1| amino-acid racemase [Bacillus cereus m1293]
gi|423573550|ref|ZP_17549669.1| aspartate racemase [Bacillus cereus MSX-D12]
gi|228584551|gb|EEK42679.1| amino-acid racemase [Bacillus cereus m1293]
gi|401214668|gb|EJR21393.1| aspartate racemase [Bacillus cereus MSX-D12]
Length = 224
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 41/252 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ + SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQQSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
K + E + R+ +LAT+AT+ AG YQ+ + + E + +K + +I
Sbjct: 106 ETLKAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHHEK--WQDMIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + +E AR L + L L V+ II ++ V +D +D
Sbjct: 155 QIITYIKSGKVEEARELWN-ALVLQLREEVDTAIIACTDLNVVAIED------FVDSSQC 207
Query: 318 LARSTVTWARSN 329
LA++ V N
Sbjct: 208 LAKAVVRMYVEN 219
>gi|170023762|ref|YP_001720267.1| aspartate racemase [Yersinia pseudotuberculosis YPIII]
gi|169750296|gb|ACA67814.1| aspartate racemase [Yersinia pseudotuberculosis YPIII]
Length = 231
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L+ AGA IV+ + H D+ C +P LH+ + A ++K+ + +IG+
Sbjct: 72 LKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADATAVQIKQQGID--------KIGL 123
Query: 222 LATDATLSAGFYQEKL-QNQGFEVVLPDKATMEHVIIPTIEALNHRDM-EGARNLLRIGI 279
L T T+ FY+ +L + G EV+ PD E V E L + E +R+ R I
Sbjct: 124 LGTRYTMEQDFYRGRLTEKHGIEVITPDDTDREAVNRIIYEELCLGIISETSRDAYRRVI 183
Query: 280 QLLLVRAVNAVIIGSDEM 297
+ L + V +I G E+
Sbjct: 184 KKLEAQGVQGIIFGCTEI 201
>gi|398902907|ref|ZP_10651338.1| aspartate racemase [Pseudomonas sp. GM50]
gi|398177808|gb|EJM65473.1| aspartate racemase [Pseudomonas sp. GM50]
Length = 496
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWY-SAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GI+GGV ++T++F+GK+V + SA +E VV +P + + ++ ++
Sbjct: 254 LGILGGVGPAATVDFMGKVVAHTSAGKDQEHIKMVVEQNPQIPD----------RTASLL 303
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
D ++ KR LE AGA I +PC+ +HA+ + +P +++ E
Sbjct: 304 RDETDPTMAMYATCKR--LESAGANAIAIPCNTAHAFVERIQTHLRVPIVNM----LTET 357
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP--DKATM 252
E + + GSG IG+LAT T+ + Y + + G +++ P D TM
Sbjct: 358 VEWIVH--KYGSGKAIGLLATSGTVQSQVYHQAARRAGLQILTPGVDYQTM 406
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 68/169 (40%), Gaps = 27/169 (15%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
+GI+GG+ + + KLV A V D LF H K + L
Sbjct: 17 LGIVGGLGSLAGGDLFYKLVKSRA----------VLEDQGRYHFLFEQ--HPFKDVLLPL 64
Query: 145 DHIRGAVSQNLRHKRAF-----LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
D S R F E++G +++PC SH + ++ E IP L + +
Sbjct: 65 D---SGASMTSRKFYVFQVCKSFEESGFDAVMLPCFASHTFRAEIQEELGIPVLDMMAAL 121
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
A+ + ++P +GV+A+D G ++ + F++V PD
Sbjct: 122 ARHVSHV-VEP-----QTTLGVIASDFVRHCGLFERHFEKD-FKIVYPD 163
>gi|92112334|ref|YP_572262.1| aspartate racemase [Chromohalobacter salexigens DSM 3043]
gi|91795424|gb|ABE57563.1| Aspartate racemase [Chromohalobacter salexigens DSM 3043]
Length = 239
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 95/237 (40%), Gaps = 44/237 (18%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL------FHA---- 132
TIG++GG+S ST ++ ALNE + FH+
Sbjct: 2 RTIGLLGGMSWESTESYY----------------------RALNEGVKQALGGFHSAKIA 39
Query: 133 --SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSI 190
SV + +T+Q D + L +E AGA +++ + H V I
Sbjct: 40 MVSVDFAEIETLQRDGRWDTAGETLAAAARQIEHAGADFLLIATNTMHKVAPQVEAAIDI 99
Query: 191 PFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKL-QNQGFEVVLPDK 249
P LH+ + A+ L A R+G+L T T+ FY+++L + G +VV+PD
Sbjct: 100 PLLHIADATAESLV--------ADGITRVGLLGTRFTMEQDFYKQRLSERYGIDVVVPDD 151
Query: 250 ATMEHVIIPTIEALNHRDMEGA-RNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
E V E L +E A R I L R AVI+G E+ ++ D
Sbjct: 152 TQRERVHQVIFEELCLGRIESASREAFLAVIDALHARGAQAVILGCTEIAMLIKATD 208
>gi|227875832|ref|ZP_03993958.1| possible aspartate racemase [Mobiluncus mulieris ATCC 35243]
gi|306819113|ref|ZP_07452827.1| possible aspartate racemase [Mobiluncus mulieris ATCC 35239]
gi|227843580|gb|EEJ53763.1| possible aspartate racemase [Mobiluncus mulieris ATCC 35243]
gi|304648089|gb|EFM45400.1| possible aspartate racemase [Mobiluncus mulieris ATCC 35239]
Length = 259
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 25/247 (10%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
T+G++GG+ +T+ FL +V ++ +++ N +L S +T
Sbjct: 26 TVGVLGGLGPLATVYFLKTVVDFTQAQSDQD-----------NVDLIITQHSSTPDRTAA 74
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L + + + L+ AGA +V+PC+ + + V E I +++ V + +
Sbjct: 75 LLDGGESPAPIMAADARKLQDAGAEFLVIPCNTATNFLQAVVEAVDIEVVNI---VTETV 131
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
E K AG R+ ++AT+ T+++ YQE LQ G+E ++P A ++ I I
Sbjct: 132 AEIGRK--NAGGIKRVAIMATEGTIASEIYQETLQLAGYEALVP-SAQLQKEISGIIYGY 188
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD----DPLLKKCIDPMDALA 319
+R L I L +AVI G E+ V+ KD DP + +D + LA
Sbjct: 189 VKAGQPVSRELFFGIINKLRQNEADAVICGCTELS-VVYKDLQITDPTI---VDSLATLA 244
Query: 320 RSTVTWA 326
R TV A
Sbjct: 245 RLTVIKA 251
>gi|424922936|ref|ZP_18346297.1| aspartate racemase [Pseudomonas fluorescens R124]
gi|404304096|gb|EJZ58058.1| aspartate racemase [Pseudomonas fluorescens R124]
Length = 230
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE GA C+V+ + H + SIPFLH+ E A +A L ++A + +G+
Sbjct: 71 LEAGGAECVVLCTNTMHKVAEQIQAAISIPFLHIAEPAA----QAALD-IDAHT---VGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATME--HVIIPTIEALNHRDMEGARNLLRIGI 279
L T T+ F +++L QG V++PD A + H II E + +R + + I
Sbjct: 123 LGTAFTMEQDFLKQRLIAQGLTVLVPDDAERKDVHRIIYD-ELCVGVISDESRQIYQRVI 181
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSN 329
+ L R A+I+G E+ G+L K + +D + A+S V +A N
Sbjct: 182 ETLTARGAQAIILGCTEI-GLLLKPEHSALPLLDTTELHAQSAVAFALGN 230
>gi|373498383|ref|ZP_09588897.1| aspartate racemase [Fusobacterium sp. 12_1B]
gi|371961892|gb|EHO79508.1| aspartate racemase [Fusobacterium sp. 12_1B]
Length = 235
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 119/258 (46%), Gaps = 36/258 (13%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPAL--NEELFHASVHSLKSK 140
+GI+GG+ +T++ K+V + AK E+ +V N+P + ++ S +
Sbjct: 5 VVGILGGMGPEATIDLFAKIVEETHAKCDEDHLRIIVDNNPKMPSRQDAIMKGTESPVAA 64
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
V A ++NL+ +AGA I++ + +H ++ +V+ IPFLH+ +
Sbjct: 65 MV-------ATAENLK-------KAGADFIIIGANTAHYFYDEVASQVDIPFLHIIDEAV 110
Query: 201 KELKEAKLKPLEAGSGV-RIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
KE+ + G+ ++GV+AT+A + Y + G EV+ K +++ + T
Sbjct: 111 KEM-------MRQVPGIKKVGVMATNAAVKIKLYDKCCAKFGIEVIAA-KEEVQNKVHDT 162
Query: 260 I-----EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDP 314
I + ++++ A + I+ A+I+G E+ +L K IDP
Sbjct: 163 IFDFKYNGVTEKNVKDAADCAEYFIE----NGAEALIMGCTEIPIIL-KGKSFTVPLIDP 217
Query: 315 MDALARSTVTWARSNKKL 332
D + + V +A++ +L
Sbjct: 218 NDIIGKVAVAYAKNKYEL 235
>gi|419960053|ref|ZP_14476100.1| putative racemase [Enterobacter cloacae subsp. cloacae GS1]
gi|388605064|gb|EIM34287.1| putative racemase [Enterobacter cloacae subsp. cloacae GS1]
Length = 230
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 36/232 (15%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG++GG+S ST+ P+ + + + + SL +V
Sbjct: 2 KTIGLLGGMSWESTI------------------PYYRLINEGVKQRMGGLHSASLLLHSV 43
Query: 143 QLDHIRGAVS--------QNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH 194
I S Q L LE+AGA+ I++ + H + + CS+PFLH
Sbjct: 44 DFHEIEACQSSGEWDKAGQILADAALGLERAGAQGILLCTNTMHKVASHIEDRCSLPFLH 103
Query: 195 VGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATME 253
+ + + ++ A + R+ +L T T+ FY+ +L +Q G E ++P++A
Sbjct: 104 IADATGRAIRTAGM--------TRVALLGTRYTMEQDFYRGRLSSQFGIESLIPEEADRA 155
Query: 254 HVIIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD 304
H+ + L E +R I+ L + VI G E+ ++P D
Sbjct: 156 HINQIIFDELCLGTFSEASRAWYVSVIEKLAQQGAEGVIFGCTEIGLLVPAD 207
>gi|359393546|ref|ZP_09186599.1| hypothetical protein KUC_0185 [Halomonas boliviensis LC1]
gi|357970793|gb|EHJ93238.1| hypothetical protein KUC_0185 [Halomonas boliviensis LC1]
Length = 234
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
+E+AGA C+++ + H +++ +IP LH+ + A++L+ + R+G+
Sbjct: 71 VERAGADCLLIATNTMHKVAPAIAKAITIPLLHIADATAEQLQTDGI--------TRVGL 122
Query: 222 LATDATLSAGFYQEKLQNQ-GFEVVLPDKATME--HVIIPTIEALNHRDMEGARNLLRIG 278
L T T+ FY +L+ Q G EVV+PD++ + H II E R + +R
Sbjct: 123 LGTRFTMEQDFYIGRLEEQFGIEVVVPDQSERDVIHQIIYQ-ELCQGRIEDDSRQRYLSI 181
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNK 330
I L + AVI+G E+ ++ + D + D A+ V WA ++
Sbjct: 182 IDSLHAQGAQAVILGCTEIAMLVGQCDTAV-PLYDTTALHAQKAVAWASDDQ 232
>gi|350272252|ref|YP_004883560.1| aspartate racemase [Oscillibacter valericigenes Sjm18-20]
gi|348597094|dbj|BAL01055.1| aspartate racemase [Oscillibacter valericigenes Sjm18-20]
Length = 231
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 102/238 (42%), Gaps = 41/238 (17%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS--K 140
TIG+IGG+S ST+++ + + N+ + +EL +HS K
Sbjct: 2 KTIGLIGGMSWESTVSY-----------------YQIVNE-VIKKEL--GGLHSAKVLLY 41
Query: 141 TVQLDHIRGAVSQN--------LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+V I S+ L LE+AGA IV+ + H + + SIP
Sbjct: 42 SVDFSEIEEYQSKGDWEKSGDVLSEAAMNLEKAGADFIVVCTNTMHKVAPQIQKKISIPI 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
LH+ E A L + ++ ++ +L T T++ FY+EKL + G EV+ P + +
Sbjct: 102 LHIAEATADALHRSNIQ--------KVALLGTKYTMTQDFYKEKLIDAGIEVLTPGEDEI 153
Query: 253 EHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
E V II L E L I I+ L + VI+G E+ ++ + D L
Sbjct: 154 ETVNDIIYDELCLGIVSAESKGKYLHI-IEELARKGAQGVILGCTEIGLLIQQKDTAL 210
>gi|228999539|ref|ZP_04159117.1| amino-acid racemase [Bacillus mycoides Rock3-17]
gi|229007097|ref|ZP_04164723.1| amino-acid racemase [Bacillus mycoides Rock1-4]
gi|228754142|gb|EEM03561.1| amino-acid racemase [Bacillus mycoides Rock1-4]
gi|228760250|gb|EEM09218.1| amino-acid racemase [Bacillus mycoides Rock3-17]
Length = 235
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 36/255 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P ++
Sbjct: 10 IGILAGMGPKSTGPFVDTVVEQCQKIYGAKHDMDFPHMMIYSCPTPFYMDK--------- 60
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
+DH A+ + + LE G I MPC+ +H + ++ S+P L++ +
Sbjct: 61 -----PIDH--KAMENAIINGAQKLENTGVDFIAMPCNTAHLYFYELQNLISVPILNMVD 113
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
KE+ + K + +LATDAT+ +G YQ+ + +G + + K + + I
Sbjct: 114 ETIKEIPDHVRK---------VALLATDATVQSGIYQDGIAKRGMDYI--HKNSWQTAIT 162
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + D+ A R + + L V+ VII ++ VL L +D
Sbjct: 163 QIISNIKIGDLPDATKSWRT-LCIELAETVDGVIIACTDLNVVLNTGAHSL-YLVDSSAC 220
Query: 318 LARSTVTWARSNKKL 332
LA++ V SNKK+
Sbjct: 221 LAKAVVNEYLSNKKV 235
>gi|319652508|ref|ZP_08006623.1| aspartate racemase [Bacillus sp. 2_A_57_CT2]
gi|317395762|gb|EFV76485.1| aspartate racemase [Bacillus sp. 2_A_57_CT2]
Length = 240
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ GA I++ + H GD+ +IP LH+ + A ++K+ +K +G+
Sbjct: 82 LEKGGADFIIICTNTMHKVIGDIQSKINIPILHIADATAAQIKKKGIKS--------VGL 133
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALN-HRDMEGARNLLRIGIQ 280
L T T+ FY+ +L+ G +V++P+ E + E L + + +R+ + IQ
Sbjct: 134 LGTRYTMEEDFYKSRLEFNGIQVIVPNDNEREIINKIIYEELCLGKIHQKSRDYYKKVIQ 193
Query: 281 LLLVRAVNAVIIGSDEMQGVLPK 303
L+ +I+G E+ G+L K
Sbjct: 194 GLIKSGAKGIILGCTEI-GLLVK 215
>gi|228923509|ref|ZP_04086791.1| amino-acid racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228836147|gb|EEM81506.1| amino-acid racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 235
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 108/256 (42%), Gaps = 45/256 (17%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 13 IGILAGMGPKSTGPFVDTVVANCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 69
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH-VG 196
K + I GA LE GA I MPC+ +H + ++ SIP L+ V
Sbjct: 70 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQHSLSIPILNIVD 116
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHV 255
E + K K R+ +LAT+AT+ AG YQ+ + + E + +K TM +
Sbjct: 117 ETLQAIPKNTK----------RVALLATEATIQAGIYQDGIAKRNIEYIYYEKWQTMINQ 166
Query: 256 IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPM 315
II I++ ++E AR L + + L V II ++ V +D +D
Sbjct: 167 IITYIKS---GEVEEARKLWS-ALVVQLKDEVATAIIACTDLNVVASED------FVDSS 216
Query: 316 DALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 217 QCLAKAVVRMYLSNIK 232
>gi|270291607|ref|ZP_06197827.1| aspartate racemase [Pediococcus acidilactici 7_4]
gi|418068867|ref|ZP_12706148.1| aspartate racemase [Pediococcus acidilactici MA18/5M]
gi|427442246|ref|ZP_18925587.1| aspartate racemase [Pediococcus lolii NGRI 0510Q]
gi|270279926|gb|EFA25764.1| aspartate racemase [Pediococcus acidilactici 7_4]
gi|357538525|gb|EHJ22546.1| aspartate racemase [Pediococcus acidilactici MA18/5M]
gi|425786787|dbj|GAC46375.1| aspartate racemase [Pediococcus lolii NGRI 0510Q]
Length = 235
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 12/131 (9%)
Query: 170 IVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLS 229
V+ C+ +H ++ D+ + IP +H+ K++K+ E + RIG++ T T +
Sbjct: 80 FVIACNTAHYFYDDLQKATEIPIVHMPRETVKQIKK------EFPAAKRIGIIGTPGTTT 133
Query: 230 AGFYQEKLQNQGFEVVLPDKATME---HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRA 286
G Y +L +G+EVV P + +I I+A N D + +LR+ + R
Sbjct: 134 DGIYDRELIAEGYEVVKPTPEIQDLTSKLIFEDIKAQNKVDAQLFYQILRLMTE---ERG 190
Query: 287 VNAVIIGSDEM 297
VI+G E+
Sbjct: 191 AQVVILGCTEL 201
>gi|384045765|ref|YP_005493782.1| aspartate racemase family protein [Bacillus megaterium WSH-002]
gi|345443456|gb|AEN88473.1| Aspartate racemase family protein [Bacillus megaterium WSH-002]
Length = 232
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 31/244 (12%)
Query: 96 TLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS----------KTVQLD 145
T+ LG + W E + + +NE L HS KS K +Q D
Sbjct: 3 TIGLLGGMSW------ESSAEYYRIINQTVNETL--GGHHSAKSVMYSVDFEEIKKLQHD 54
Query: 146 HIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKE 205
+ ++ + ++E+ GA +V+ + H D+ S+P LH+ + AK +K
Sbjct: 55 NRWDEATELMIKGAQYIEKGGADFLVICTNTMHKMENDIQNEISVPILHIADATAKRIKN 114
Query: 206 AKLKPLEAGSGVRIGVLATDATLSAGFYQEKL-QNQGFEVVLPDKATME--HVIIPTIEA 262
+ R+G+L T T+ FY+ +L N +V +P + + H II
Sbjct: 115 KGIS--------RVGLLGTKFTMEEDFYKGRLIANHNLKVNIPGEKERQTVHDIIYKELC 166
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARST 322
L ++ +I I L+ + I+G E+ ++ ++D L D + A++
Sbjct: 167 LGKINLNSKSAYQKI-INGLINDGIEGAILGCTEISLLINQNDTSL-PIFDTTEIHAQTA 224
Query: 323 VTWA 326
V WA
Sbjct: 225 VDWA 228
>gi|398843036|ref|ZP_10600199.1| aspartate racemase [Pseudomonas sp. GM102]
gi|398104429|gb|EJL94565.1| aspartate racemase [Pseudomonas sp. GM102]
Length = 496
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 21/171 (12%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWY-SAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GI+GGV ++T++F+GK+V + SA +E VV +P + + ++ +
Sbjct: 254 LGILGGVGPAATVDFMGKVVAHTSAGKDQEHIKMVVEQNPQIPD----------RTANLL 303
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
D ++ KR LE AGA I +PC+ +HA+ + +P +++ E
Sbjct: 304 RDETDPTMAMYATCKR--LESAGANAIAIPCNTAHAFVERIQTHLRVPIVNM----LTET 357
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP--DKATM 252
E + + GSG IG+LAT T+ + Y + + G +++ P D TM
Sbjct: 358 VEWIVH--KYGSGKAIGLLATSGTVQSQVYHQAARRAGLQILTPGVDYQTM 406
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 27/169 (15%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
+GI+GG+ + + KLV A V D LF H K + L
Sbjct: 17 LGIVGGLGSLAGGDLFYKLVKSRA----------VLEDQGRYHFLFEQ--HPFKDVLLPL 64
Query: 145 DHIRGAVSQNLRHKRAF-----LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
D S R F E++G +++PC SH + ++ E IP L + +
Sbjct: 65 D---SGASMTSRKFYVFQVCKSFEESGFDAVMLPCFASHTFRAEIQEELGIPVLDMMAAL 121
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
+ + ++P +GV+A+D G ++ + F++V PD
Sbjct: 122 TRHVSHV-VEP-----QTTLGVIASDFVRHCGLFERHFEKD-FKIVYPD 163
>gi|398795621|ref|ZP_10555450.1| aspartate racemase [Pantoea sp. YR343]
gi|398205800|gb|EJM92579.1| aspartate racemase [Pantoea sp. YR343]
Length = 229
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 21/177 (11%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ GA IV+ + H +++ SIP LH+ + A+ +++A +K ++G+
Sbjct: 71 LEKGGADFIVLCTNTMHKVAQQITDAVSIPLLHIADATAQRIRQAGVK--------KVGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATME--HVIIPTIEALNH-RDMEGARNLLRIG 278
LAT T+ FY+ +L EV++PD A + H II L RD +R R
Sbjct: 123 LATAFTMEQEFYKGRLNQSEIEVLVPDAAGRKVVHDIIYQELCLGVIRD--ESRAQYRKI 180
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNKKLTLL 335
I L+ + A+I+G E+ LL K D L +T+ A KL LL
Sbjct: 181 IAELVEQGAEAIILGCTEI--------TLLVKTEDASVPLFDTTLIHAEDAVKLALL 229
>gi|228907954|ref|ZP_04071805.1| hypothetical protein bthur0013_21180 [Bacillus thuringiensis IBL
200]
gi|228851713|gb|EEM96516.1| hypothetical protein bthur0013_21180 [Bacillus thuringiensis IBL
200]
Length = 230
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 107/234 (45%), Gaps = 38/234 (16%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL--FHAS---VHSLK 138
TIG+IGG+S ST + + + N+ + E L H++ ++S+
Sbjct: 3 TIGLIGGMSWESTSEY-----------------YRIINEE-IKERLGGLHSAKCLINSVD 44
Query: 139 SKTVQLDHIRG---AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ ++ RG + L + L++ GA I++ + H G + E IP LH+
Sbjct: 45 FEEIERFQSRGDWNGAGEVLANAAYSLQKGGADFIIICTNTMHKVVGKIKEKIDIPVLHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ AKE+K ++ ++G+L T T+ FY+ +++ +V++P E V
Sbjct: 105 ADATAKEIKRKDIQ--------KVGLLGTKYTMEQDFYKSRIEEHDIKVIVPSGTNREKV 156
Query: 256 --IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPL 307
+I T E + + +R + I+ L+ + +I+G E+ G+L K + +
Sbjct: 157 NEVIYT-ELCLGKIVSQSREYYKRVIEELVQKGAQGIILGCTEI-GLLIKQENV 208
>gi|229019989|ref|ZP_04176779.1| amino-acid racemase [Bacillus cereus AH1273]
gi|229026224|ref|ZP_04182584.1| amino-acid racemase [Bacillus cereus AH1272]
gi|228735070|gb|EEL85705.1| amino-acid racemase [Bacillus cereus AH1272]
gi|228741310|gb|EEL91520.1| amino-acid racemase [Bacillus cereus AH1273]
Length = 224
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 18/170 (10%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE G I MPC+ +H + ++ +IP L++ + K + E K + +
Sbjct: 70 LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIVDETLKAIPENTKK---------VAL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQL 281
LAT+AT+ AG YQ+ + + E + ++ + +I I + ++E AR L + + L
Sbjct: 121 LATEATVQAGIYQDGITKRNIEYIHNEQ--WQEMINQIITCIKGGEIEKARKLWSV-LVL 177
Query: 282 LLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNKK 331
L V+ II ++ VL +D +D LA++ V SN K
Sbjct: 178 QLKDEVDTAIIACTDLNVVLSED------FVDSSQCLAKAVVRMYVSNIK 221
>gi|206896546|ref|YP_002247561.1| aspartate racemase [Coprothermobacter proteolyticus DSM 5265]
gi|206739163|gb|ACI18241.1| aspartate racemase [Coprothermobacter proteolyticus DSM 5265]
Length = 239
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 101/249 (40%), Gaps = 33/249 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPA-LNEELFHASVHSLKSKTVQ 143
IGIIGG+ +TL+ K++ N PA +++ H + + S +
Sbjct: 8 IGIIGGMGPEATLDLFRKILR---------------NTPANKDQDHLHLIIDNNTSIPDR 52
Query: 144 LDHIRGAVSQNL---RHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
D+I G L LE AG I M C+ +H + D+ + F+ + + V
Sbjct: 53 TDYILGKGENPLPFILESARLLESAGVNAICMACNTAHIFESDIKAHIHVDFISIVDSVL 112
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEH---VII 257
ELK IG+ T S+ Y E L +G++++LP E VI
Sbjct: 113 NELKGT------FSQAKSIGLAGTMGVFSSHLYDEPLMQRGYKLILPTNELQEELMKVIY 166
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
+ ++ A LL Q + + +I+ E+ VL P + +D +A
Sbjct: 167 SIKQGCIKEVIDKAEELL----QWYKDQKADVLIMACTELPLVLDYLVPPI-PVVDSTEA 221
Query: 318 LARSTVTWA 326
LA+S V +A
Sbjct: 222 LAKSVVRYA 230
>gi|317129519|ref|YP_004095801.1| aspartate racemase [Bacillus cellulosilyticus DSM 2522]
gi|315474467|gb|ADU31070.1| aspartate racemase [Bacillus cellulosilyticus DSM 2522]
Length = 236
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIGI+GG+ +T++ K+V S A+ ++ ++ N+P + +S+ +
Sbjct: 7 TIGILGGMGPMATVDLFKKIVNESGAERDQDHHKIIIFNNPKIPS----------RSEAI 56
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
L + A Q L+ + LE AGA I++PCH +H W ++ + +IP +++ +
Sbjct: 57 -LKGMNTAFPQLLKSAKT-LEAAGADFIIIPCHTAHYWFRELQDQLNIPIINMIDNTVNY 114
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ L ++ +LAT T+ + +Q + + V+P+ E V
Sbjct: 115 INS-----LTKNESQKVLILATRGTIYSKIFQNEFMIKRIPYVVPNSEEQEIV 162
>gi|305666777|ref|YP_003863064.1| Asp/Glu racemase:Aspartate racemase [Maribacter sp. HTCC2170]
gi|88709001|gb|EAR01235.1| Asp/Glu racemase:Aspartate racemase [Maribacter sp. HTCC2170]
Length = 231
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAK-----DAEECPPFVVCNDPALNEELFHASVHSLKS 139
IG+IGG++ STL + L +AK + +C L E + A + SLK
Sbjct: 4 IGLIGGITWQSTLLYYQYLNEGTAKALGGKHSSKC----------LIESVDFADI-SLKQ 52
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+ Q D ++Q+ LEQAGA +++ + H + E +IP LH+ +
Sbjct: 53 EKSQWD----LLNQDFAEMANKLEQAGAEVLLICANTMHLCADAIKEKVTIPLLHIADVC 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATME--HVI 256
+E+ K ++ +L T T+ FY++ L+NQ G EV++P K E H +
Sbjct: 109 GEEITSKGCK--------KVLLLGTKYTMELDFYKDILKNQYGIEVMIPSKEDREVVHDV 160
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
I T E E ++ + I+ V AVI+G E+ ++ ++D
Sbjct: 161 IYT-ELAKGIISEDSKKQYKDIIKKSEEEGVEAVILGCTEIPLLIQQED 208
>gi|303325617|ref|ZP_07356060.1| aspartate racemase [Desulfovibrio sp. 3_1_syn3]
gi|345892211|ref|ZP_08843034.1| hypothetical protein HMPREF1022_01694 [Desulfovibrio sp.
6_1_46AFAA]
gi|302863533|gb|EFL86464.1| aspartate racemase [Desulfovibrio sp. 3_1_syn3]
gi|345047350|gb|EGW51215.1| hypothetical protein HMPREF1022_01694 [Desulfovibrio sp.
6_1_46AFAA]
Length = 230
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 45/240 (18%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG++GG+S ST+++ ++V K+ C L+ +++
Sbjct: 2 KTIGLLGGMSWESTVSYY-RIVNTVVKERLGGLHSARCL-------LYSVDFQEIEACQS 53
Query: 143 QLDHIR-----GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
D R GA +QNL E+ GA IV+ + H + SIP LH+ +
Sbjct: 54 AGDWDRSALLLGAAAQNL-------EKGGADFIVICTNTMHKVAHRIQAAVSIPLLHIAD 106
Query: 198 CVAKELKEAKLKPLEAGSGVR-IGVLATDATLSAGFYQEKLQNQGFEVVLPD-------- 248
A E+ G G+R +G+L T T+ FY +L+ QG EV++PD
Sbjct: 107 VTAAEI---------LGRGLRSVGLLGTRYTMEEDFYCGRLRRQGLEVLIPDAPERDMIN 157
Query: 249 KATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
K E + + I E +R + + L R VI+G E+ +L +D L
Sbjct: 158 KVIFEELCLGVIR-------EDSRKKFQAAMAGLAGRGARGVILGCTEIGLLLRPEDAEL 210
>gi|343499437|ref|ZP_08737409.1| hypothetical protein VITU9109_01887 [Vibrio tubiashii ATCC 19109]
gi|418480194|ref|ZP_13049258.1| hypothetical protein VT1337_17190 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342822785|gb|EGU57464.1| hypothetical protein VITU9109_01887 [Vibrio tubiashii ATCC 19109]
gi|384572172|gb|EIF02694.1| hypothetical protein VT1337_17190 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 230
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 31/243 (12%)
Query: 84 TIGIIGGVSVSSTLNFLGKL--VWYSAKDAEECPPFVVCNDPALNEELFHASVHSL-KSK 140
TIGIIGG+S ST + +L SAK + LN F A V +L +S
Sbjct: 3 TIGIIGGMSWESTAIYYQQLNEGVKSAKGGLHSAKII------LNSVDF-AEVEALQRSG 55
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
Q A + L +E+AGA I++ + H G V E SIP LH+ +
Sbjct: 56 DWQ------ANATILCQAAQSIEKAGADFILIATNTMHKVAGQVEESISIPLLHIADATG 109
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPD--KATMEHVII 257
EL++ + +IG+L T T+ FY+++L ++ G EVV+P+ + + H II
Sbjct: 110 VELQQRGI--------TKIGLLGTAFTMEQAFYKQRLTDKFGIEVVVPNGVQRKLVHDII 161
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD---PLLKKCIDP 314
L + + L I I L VI+G E+ ++ + D PL
Sbjct: 162 YNELCLGKINRRSKDDYLTI-IDDLAASGAEGVILGCTEIGLLVEQSDTQVPLFDTVAIH 220
Query: 315 MDA 317
+DA
Sbjct: 221 VDA 223
>gi|389853054|ref|YP_006355288.1| aspartate racemase [Pyrococcus sp. ST04]
gi|388250360|gb|AFK23213.1| aspartate racemase [Pyrococcus sp. ST04]
Length = 227
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 24/223 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEEC--PPFVVCNDPALNEELFHASVHSLKSKTV 142
IGIIGG + ST + K + S + E+ P ++ ++N + F + + +
Sbjct: 4 IGIIGGTTPESTCYYYRKYIEISREKFEKYVYPELIIY---SINFKEFFENPEGWEGRKK 60
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
L + A LE+AGA I + H DV + ++P + + + VA+E
Sbjct: 61 ILINAAKA-----------LERAGAELIAFSANTPHIVFDDVQKEVNVPMVSIIDAVAEE 109
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
+ +K ++ +L T T+SA FY L+++G EVV+P E + E
Sbjct: 110 VLRRGVK--------KVLLLGTKTTMSADFYINALKDKGLEVVVPSDEEKEKLNRIIFEE 161
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
L D+ ++ + + + + VI+G E+ + + D
Sbjct: 162 LAFEDLRSKDWIVSLIEKYAKEKGIEGVILGCTELPLAIKQGD 204
>gi|341581273|ref|YP_004761765.1| aspartate racemase [Thermococcus sp. 4557]
gi|340808931|gb|AEK72088.1| aspartate racemase [Thermococcus sp. 4557]
Length = 229
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 109/248 (43%), Gaps = 23/248 (9%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IGIIGG S +T + K Y E+ P+V EL S++ K
Sbjct: 4 IGIIGGTSPEATCYYYKK---YLEISREKFEPYVFP-------ELIIYSIN-FKEFIHNP 52
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
+ G ++ +A LE AGA I + + H ++ + S+P + + + + +E++
Sbjct: 53 NGWEGRKEILIKAAKA-LENAGAEIISLSANTPHIVFPEIQKAVSVPMVSIIDALIEEME 111
Query: 205 EAKLKPLEAGSGVR-IGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
GVR + +L T T++A FY+ L+ GF+V+ P++ M+ + E L
Sbjct: 112 R---------RGVRKVLLLGTKTTMTADFYKNALREAGFDVITPNEGEMDELNRIITEEL 162
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTV 323
+ +L + + + + VI+G E+ ++ + D + + D ++ R +
Sbjct: 163 MFENFASRDWVLNLINRYIDKEGIEGVILGCTELPLIVKQGD-VEAEVFDTVEIHMRKLI 221
Query: 324 TWARSNKK 331
A NK+
Sbjct: 222 EVASENKE 229
>gi|317491295|ref|ZP_07949731.1| aspartate racemase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920842|gb|EFV42165.1| aspartate racemase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 233
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 37/254 (14%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE-ELFHAS---VHSLK 138
T+G++GG+S ST+ P + + N+ N+ H++ ++S+
Sbjct: 2 KTLGLLGGMSWESTV-----------------PYYRIINETVKNQLGGLHSARLVLYSVD 44
Query: 139 SKTVQLDHIRGAVSQN---LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
V+ +RG +Q L L+ AGA IV+ + H + C +P LH+
Sbjct: 45 FAEVEHLQMRGEWAQAGELLADAAQRLQAAGAEGIVVCTNTMHKVAEQIESRCGLPLLHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATME- 253
+ A +K L RIG+L T T+ FY+ +L ++ G EV++P+++ E
Sbjct: 105 ADATAARIKAQGL--------TRIGLLGTRFTMEQDFYRGRLTDKFGIEVIVPNESDREV 156
Query: 254 -HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCI 312
H II L E +R R +Q L ++ +I+G E+ ++ + D ++
Sbjct: 157 IHRIIYQELCLGQIRPE-SRQQYREIMQRLSEQSAQGIILGCTEIALLVAQTDAVV-PLF 214
Query: 313 DPMDALARSTVTWA 326
D A WA
Sbjct: 215 DTAQIHAEYAAHWA 228
>gi|241896564|ref|ZP_04783860.1| aspartate racemase [Weissella paramesenteroides ATCC 33313]
gi|241870286|gb|EER74037.1| aspartate racemase [Weissella paramesenteroides ATCC 33313]
Length = 241
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 105/246 (42%), Gaps = 20/246 (8%)
Query: 84 TIGIIGGVSVSSTLNFLGKL--VWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
+ GIIGG+ +T NF+ + + + KD ++ ++V N ++ + + S H+ K
Sbjct: 11 SFGIIGGMGTIATENFVHIINELTVTHKD-QDYLDYIVFNHASIPDRTAYISDHT---KQ 66
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
L + V + L G IV+ C+ +H + ++ + +P + E K
Sbjct: 67 NPLPFLASDVEK--------LNYLGVSFIVITCNTAHYFLPELQKQSEVPIFSMPELAVK 118
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
K+ E +R+G++AT+ T+SAG YQ+ L + V+PD+ V+ E
Sbjct: 119 ACKK------ETNKSIRVGIMATNGTISAGIYQKALIGKNVTPVIPDEYQQNLVMSLIYE 172
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARS 321
+ +R+ ++ + +I+G E+ + + ID LA+
Sbjct: 173 DIKNRNFVDQEKYYQLIEYFFEECECDYIILGCTELSVAQEQTHYPSEYVIDAQFELAKY 232
Query: 322 TVTWAR 327
V +
Sbjct: 233 VVNQVK 238
>gi|45358302|ref|NP_987859.1| Asp/Glu racemase:aspartate racemase [Methanococcus maripaludis S2]
gi|44921060|emb|CAF30295.1| Asp/Glu racemase:Aspartate racemase [Methanococcus maripaludis S2]
Length = 234
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 19/165 (11%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIG+IGG+S ST + +++ S +D P C +++ F H
Sbjct: 3 TIGLIGGLSWESTQEYY-RIINQSIRDKLGAPHSAKCILYSVDFAEFDKLSH-------- 53
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
D +++ L LE+AGA I++ + H VSE +IP +H+ + VA+++
Sbjct: 54 -DEEWDVIAEKLTDIAKTLEKAGAEGILICTNTMHTVADSVSENINIPLVHIVDAVAEDI 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLP 247
K+ +K ++G+L T T+ FY +L+ + +V++P
Sbjct: 113 KQKNIK--------KVGLLGTKFTMEQEFYSGRLKEKHEIDVIIP 149
>gi|448746993|ref|ZP_21728657.1| Aspartate racemase [Halomonas titanicae BH1]
gi|445565503|gb|ELY21613.1| Aspartate racemase [Halomonas titanicae BH1]
Length = 231
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 108/264 (40%), Gaps = 55/264 (20%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHA--SVHSLKSKTV 142
IG++GG+S ST + ALNE + A HS K V
Sbjct: 4 IGVLGGMSWESTQGYY----------------------RALNEGVKAALGGFHSAKIVMV 41
Query: 143 QLD--HIRGAVSQNLRHKRAFL--------EQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+D I Q H L E+AGA C+++ + H + + +IP
Sbjct: 42 SVDFAEIEALQQQGDWHAAGELLASAAQSVERAGADCLLIATNTMHKVAPAIEQAVTIPL 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKA- 250
LH+ + A++L A R+G+L T T+ FY +L+ Q G EVV+PD++
Sbjct: 102 LHIADATAEQLT--------ADGITRVGLLGTRFTMEQDFYIGRLEKQFGIEVVVPDQSE 153
Query: 251 --TMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD--- 305
T+ VI + +D+ R L I L AVI+G E+ ++ + D
Sbjct: 154 RDTIHRVIFDELCQGRIKDVSRQRYLAI--IDSLHAHGAQAVILGCTEIAMLVGQRDTKV 211
Query: 306 PLLKKCIDPMDALARSTVTWARSN 329
PL D A+ V WA ++
Sbjct: 212 PLY----DTTALHAQRAVAWALND 231
>gi|226357715|ref|YP_002787454.1| aspartate racemase [Deinococcus deserti VCD115]
gi|226319957|gb|ACO47950.1| putative aspartate racemase [Deinococcus deserti VCD115]
Length = 243
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 21/164 (12%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSL 137
+N+A +G++GG+ +TL+F K++ + A+ ++ ++ N+P + + S
Sbjct: 1 MNRA--VGVLGGMGPEATLDFFAKVLRRAGARSDQDHLRLLIDNNPGVPDRNAALSGRGE 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
V RG L+ +GA +VM C+ +HA+ D+ ++PF+ + E
Sbjct: 59 SPGPVLAQMARG------------LQASGADFLVMVCNTAHAFEEDILNATTLPFVSLIE 106
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQG 241
E ++A L+ E R+G+LAT L AG YQ G
Sbjct: 107 ----ETRDAALR--EQPGLQRVGLLATSTCLGAGLYQSAFAPYG 144
>gi|75763381|ref|ZP_00743116.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|74489131|gb|EAO52612.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
Length = 235
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P +
Sbjct: 13 IGILAGMGPKSTGPFVDTVVARCQTIYGAKHDMDFPHMMIYSCPTPFYMDR--------- 63
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
+DH GA+ + + LE G I MPC+ +H + ++ SIP L++ +
Sbjct: 64 -----PIDH--GAMKKAIIDGAQKLESTGVSFIAMPCNTAHLYFEELQRSLSIPILNIVD 116
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ + E + R+ +LAT+AT+ A YQ+ + + E + +K + I
Sbjct: 117 ETLQAIPE---------NTKRVALLATEATVQARIYQDGIAKRNIEYIHHEK--WQESIN 165
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L ++ II ++ V +D ID
Sbjct: 166 QIITCIKSGEIEEARELWNTLV-LQLRDEIDTAIIACTDLNVVASED------FIDSSQC 218
Query: 318 LARSTVTWARSNKK 331
LA + V SNKK
Sbjct: 219 LADAVVEMYLSNKK 232
>gi|307244154|ref|ZP_07526272.1| aspartate racemase [Peptostreptococcus stomatis DSM 17678]
gi|306492525|gb|EFM64560.1| aspartate racemase [Peptostreptococcus stomatis DSM 17678]
Length = 239
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 19/170 (11%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH-VGECVAKELKEAKLKPLEAGSGVRIG 220
LE AGA +V+ C+ +H ++ D+ EG +P ++ + E V K+ K IG
Sbjct: 74 LEAAGADFLVLTCNTAHYFYKDIVEGLGVPLINMIEETVVHAKKQGHRK---------IG 124
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV---IIPTIEALNHRDMEGARNLLRI 277
+LAT + G YQ+ Q + +P + + V I ++A DM+ +
Sbjct: 125 ILATTGNIRTGLYQDMCVAQSMDYYVPTQQVQDMVMDIIYNQVKAGKKADMDQFNKI--- 181
Query: 278 GIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK-CIDPMDALARSTVTWA 326
I++L + I+G E+ ++ KD+ L +D + LA +T+ A
Sbjct: 182 -IEVLKAEGCDCAILGCTELS-IIKKDEKLPNDFFVDSSEVLAMTTILKA 229
>gi|89901877|ref|YP_524348.1| aspartate racemase [Rhodoferax ferrireducens T118]
gi|89346614|gb|ABD70817.1| Aspartate racemase [Rhodoferax ferrireducens T118]
Length = 259
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 14/215 (6%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
+GI+GG+ ++ +F+ V A ++C V ND E + +T L
Sbjct: 24 VGILGGMGPAAGADFVRLFVQACADRMQQCGQAV--NDQTFPEHWLMQV--PVPDRTQAL 79
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCS-IPFLHVGECVAKEL 203
A + + LE G + M C+ +HAWH ++ I LH+ V L
Sbjct: 80 SSADDAPLEAMARALGRLETVGVCAVAMACNTAHAWHDELQARIPLIELLHMPREVVAYL 139
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEAL 263
+ +L+ +G+LAT T G Y+ L G LP +A E ++ + +
Sbjct: 140 RALRLR--------EVGLLATQGTYRTGLYEAALAQAGITCHLPYEAERETLMRGIYDGV 191
Query: 264 NHRDMEGARNLLRIGIQLLLVRAVNA-VIIGSDEM 297
DM A++ Q L+ R + +I+G E+
Sbjct: 192 KTGDMAYAQSCFVDVAQRLIGRHGDVPLIMGCTEI 226
>gi|289806464|ref|ZP_06537093.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 115
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE AGA CIV+PC+ +H W D+ +V + + +A L + S +G+
Sbjct: 32 LEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARMISILDATLGDIPP-SARHVGL 82
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKA 250
LAT+ATL+ G YQ+K +G ++ P+ A
Sbjct: 83 LATNATLATGLYQKKALARGLTLIQPEDA 111
>gi|423388935|ref|ZP_17366161.1| aspartate racemase [Bacillus cereus BAG1X1-3]
gi|401643010|gb|EJS60716.1| aspartate racemase [Bacillus cereus BAG1X1-3]
Length = 224
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 18/170 (10%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE G I MPC+ +H + ++ +IP L++ + K + E K + +
Sbjct: 70 LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIVDETLKAIPENTKK---------VAL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQL 281
LAT+AT+ AG YQ+ + + E + ++ + +I I + ++E AR L + + L
Sbjct: 121 LATEATVQAGIYQDGITKRNIEYIHNEQ--WQEMINQIITCIKGGEIEEARKLWSVLV-L 177
Query: 282 LLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNKK 331
L V+ II ++ VL +D +D LA++ V SN K
Sbjct: 178 QLKDEVDTAIIACTDLNVVLSED------FVDSSQCLAKAVVRMYVSNIK 221
>gi|228903273|ref|ZP_04067405.1| amino-acid racemase [Bacillus thuringiensis IBL 4222]
gi|434377905|ref|YP_006612549.1| aspartate racemase [Bacillus thuringiensis HD-789]
gi|228856374|gb|EEN00902.1| amino-acid racemase [Bacillus thuringiensis IBL 4222]
gi|401876462|gb|AFQ28629.1| aspartate racemase [Bacillus thuringiensis HD-789]
Length = 224
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P +
Sbjct: 2 IGILAGMGPKSTGPFVDTVVARCQTIYGAKHDMDFPHMMIYSCPTPFYMDR--------- 52
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
+DH GA+ + + LE G I MPC+ +H + ++ SIP L++ +
Sbjct: 53 -----PIDH--GAMKKAIIDGAQKLESTGVSFIAMPCNTAHLYFEELQRSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ + E + R+ +LAT+AT+ A YQ+ + + E + +K + I
Sbjct: 106 ETLQAIPE---------NTKRVALLATEATVQARIYQDGIAKRNIEYIHHEK--WQESIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L ++ II ++ V +D ID
Sbjct: 155 QIITCIKSGEIEEARELWNTLV-LQLRDEIDTAIIACTDLNVVASED------FIDSSQC 207
Query: 318 LARSTVTWARSNKK 331
LA + V SNKK
Sbjct: 208 LADAVVEMYLSNKK 221
>gi|229032411|ref|ZP_04188381.1| amino-acid racemase [Bacillus cereus AH1271]
gi|228728913|gb|EEL79919.1| amino-acid racemase [Bacillus cereus AH1271]
Length = 225
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 36/219 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + L H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDMDFPHMMIYSCPTPFYMDRLID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE G I MPC+ +H + ++ SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGVEFIAMPCNTAHLYFEELQHSLSIPVLNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHVI 256
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K TM + I
Sbjct: 106 ETLQAIPE---------NTKRVALLATEATIQAGIYQDGITKRNIEYIHHEKWQTMINQI 156
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSD 295
I I+ ++E AR L + + L A+I +D
Sbjct: 157 ITCIKG---GEIEEARELWSVLVVQLKAEVDTAIIACTD 192
>gi|23100846|ref|NP_694313.1| amino acid racemase [Oceanobacillus iheyensis HTE831]
gi|22779080|dbj|BAC15347.1| amino acid racemase [Oceanobacillus iheyensis HTE831]
Length = 231
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 42/177 (23%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL------FHAS---V 134
TIG+IGG+S W S+ + +NEE+ H++ +
Sbjct: 3 TIGLIGGMS------------WESSSEYYRI----------INEEVKARLGGLHSAKCIL 40
Query: 135 HSLKSKTVQLDHIRG---AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
+S+ ++ D G + L H LE+AGA I++ + H D+ + SIP
Sbjct: 41 YSVDFADIERDQSLGDWKSAGHKLAHAAHSLEKAGADFIIICTNTMHKTVEDIEKAISIP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
LH+ + A ++K + IG+L T T+ FY+ +++ G V++PD
Sbjct: 101 ILHIADATATKIKSTNINT--------IGLLGTTYTMQHDFYKNRIKMSGINVIIPD 149
>gi|349609953|ref|ZP_08889316.1| hypothetical protein HMPREF1028_01291 [Neisseria sp. GT4A_CT1]
gi|348610896|gb|EGY60575.1| hypothetical protein HMPREF1028_01291 [Neisseria sp. GT4A_CT1]
Length = 230
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 87/216 (40%), Gaps = 21/216 (9%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST V Y E + N A ++ SV + +Q
Sbjct: 3 TIGIIGGMSPEST-------VLYYQIINRETNRRLGGNRSA---KILLDSVDFEEIVRLQ 52
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
A L LE GA +++ + H + + IP LHV + A +
Sbjct: 53 KSGDWAAAGNVLAQSARKLEAGGADFLLLATNTMHKVAPAIEQAAGIPLLHVVDATAAAI 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME--HVIIPTIE 261
K L +G+L T T+S GFY E++ +QG + + P A + H II
Sbjct: 113 KRQGLSA--------VGLLGTRFTMSDGFYTERMGSQGVKTIAPTAAEQDEIHRIIFDEL 164
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
LNH E AR + I L VI+G E+
Sbjct: 165 CLNHIRPESARYFYDV-IGRLKNEGAQGVILGCTEI 199
>gi|262280271|ref|ZP_06058055.1| aspartate racemase [Acinetobacter calcoaceticus RUH2202]
gi|262258049|gb|EEY76783.1| aspartate racemase [Acinetobacter calcoaceticus RUH2202]
Length = 236
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 106/255 (41%), Gaps = 31/255 (12%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYSAK--DAEECPPFVVCNDPALNEELFHASVHS 136
+N+A IGI+GG+ +T++ + K++ + D E P V S+
Sbjct: 1 MNKA--IGILGGMGPQATIDAMNKIIKNTPAHCDQEHIPVITV-------------SIPD 45
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
+ +T + + + + LE A CI++PC+ +H W + + + +
Sbjct: 46 IPDRTQSIINHDDKPLEKMAEYLKILEAAQVGCIIIPCNTAHFWFNQLQQRTQTKMISII 105
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
E ++++++ + +LAT AT+S YQ + P M+H +
Sbjct: 106 ESAVHFIQDSQI--------AEVCILATSATISTQLYQSQFIQNNIRFSTP-SVEMQHKV 156
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLP---KDDPLLKKCID 313
+ +I ++E ++ L+ I ++ E+ +L +D+P L +D
Sbjct: 157 MQSIYQYKAGNIEKSKQLMSEVIHFYRQNKSIKFLLACTEIPLILQDSIQDNPEL--FVD 214
Query: 314 PMDALARSTVTWARS 328
D L ++ + W ++
Sbjct: 215 ATDLLIKNAIAWYQN 229
>gi|397163954|ref|ZP_10487412.1| putative aspartate/glutamate racemase [Enterobacter radicincitans
DSM 16656]
gi|396094509|gb|EJI92061.1| putative aspartate/glutamate racemase [Enterobacter radicincitans
DSM 16656]
Length = 230
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 38/238 (15%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCND--PALNEELFHASV--HSLK 138
TIG++GG+S ST+ P + + N+ A L AS+ HSL
Sbjct: 2 KTIGLLGGMSWESTI-----------------PYYRLINEGVKARMGGLHSASLLLHSLD 44
Query: 139 SKTVQLDHIRG---AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
++ + L A LEQAGA+ IV+ + H G + E C IPFLH+
Sbjct: 45 FHEIEACQATAQWHKAGEILAQAAAGLEQAGAQAIVLCTNTMHKVAGQIEERCHIPFLHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLP---DKAT 251
+ + ++ A ++ + +L T T+ FY+ +L+ Q G E +P D+
Sbjct: 105 ADATGRAIESAGMR--------NVALLGTRYTMEQDFYRGRLEKQFGIETCVPGPEDRER 156
Query: 252 MEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK 309
+ +I + L E + + I+ + VI G E+ ++P+ +K
Sbjct: 157 VNEIIFEEL-CLGTFSDESRYYFINL-IKQMASEGAEGVIFGCTEIGLLIPEKSSPIK 212
>gi|89896850|ref|YP_520337.1| hypothetical protein DSY4104 [Desulfitobacterium hafniense Y51]
gi|89336298|dbj|BAE85893.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 231
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 13/150 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE AGA IV+ + H ++ G IP LH+ + A++ ++ IG+
Sbjct: 71 LEAAGAEFIVLCTNTMHKVADEIQAGLQIPLLHIADMTAQQALTNNIRT--------IGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPTIEALNHRDMEGARNLLRIG 278
L T T+ FY+ +L+ QG +V+ P DKA + VI + L + E +RN +
Sbjct: 123 LGTRYTMEQDFYRSRLEAQGIKVLTPEEGDKAVVNEVIYQEL-CLGIINQE-SRNQFKRI 180
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
I L+ + +++G E+ ++ ++D ++
Sbjct: 181 IADLVEQGAQGIVLGCTEIGLLIKQEDSIV 210
>gi|293557294|ref|ZP_06675840.1| aspartate racemase [Enterococcus faecium E1039]
gi|293568099|ref|ZP_06679436.1| aspartate racemase [Enterococcus faecium E1071]
gi|294616494|ref|ZP_06696275.1| aspartate racemase [Enterococcus faecium E1636]
gi|294617425|ref|ZP_06697059.1| aspartate racemase [Enterococcus faecium E1679]
gi|406580747|ref|ZP_11055936.1| aspartate racemase [Enterococcus sp. GMD4E]
gi|406583082|ref|ZP_11058175.1| aspartate racemase [Enterococcus sp. GMD3E]
gi|406585434|ref|ZP_11060424.1| aspartate racemase [Enterococcus sp. GMD2E]
gi|406590515|ref|ZP_11064880.1| aspartate racemase [Enterococcus sp. GMD1E]
gi|410937267|ref|ZP_11369128.1| aspartate racemase [Enterococcus sp. GMD5E]
gi|415893423|ref|ZP_11550156.1| aspartate racemase [Enterococcus faecium E4453]
gi|416129604|ref|ZP_11597345.1| aspartate racemase [Enterococcus faecium E4452]
gi|425058946|ref|ZP_18462303.1| aspartate racemase [Enterococcus faecium 504]
gi|427396246|ref|ZP_18889005.1| aspartate racemase [Enterococcus durans FB129-CNAB-4]
gi|430822599|ref|ZP_19441177.1| aspartate racemase [Enterococcus faecium E0120]
gi|430825558|ref|ZP_19443762.1| aspartate racemase [Enterococcus faecium E0164]
gi|430827688|ref|ZP_19445820.1| aspartate racemase [Enterococcus faecium E0269]
gi|430833021|ref|ZP_19451034.1| aspartate racemase [Enterococcus faecium E0679]
gi|430835727|ref|ZP_19453714.1| aspartate racemase [Enterococcus faecium E0680]
gi|430838172|ref|ZP_19456122.1| aspartate racemase [Enterococcus faecium E0688]
gi|430849612|ref|ZP_19467385.1| aspartate racemase [Enterococcus faecium E1185]
gi|430858069|ref|ZP_19475698.1| aspartate racemase [Enterococcus faecium E1552]
gi|430860270|ref|ZP_19477874.1| aspartate racemase [Enterococcus faecium E1573]
gi|430865159|ref|ZP_19480917.1| aspartate racemase [Enterococcus faecium E1574]
gi|430871416|ref|ZP_19483739.1| aspartate racemase [Enterococcus faecium E1575]
gi|430949078|ref|ZP_19485997.1| aspartate racemase [Enterococcus faecium E1576]
gi|431005399|ref|ZP_19489045.1| aspartate racemase [Enterococcus faecium E1578]
gi|431146210|ref|ZP_19499107.1| aspartate racemase [Enterococcus faecium E1620]
gi|431229850|ref|ZP_19502053.1| aspartate racemase [Enterococcus faecium E1622]
gi|431252313|ref|ZP_19504371.1| aspartate racemase [Enterococcus faecium E1623]
gi|431293373|ref|ZP_19506841.1| aspartate racemase [Enterococcus faecium E1626]
gi|431412519|ref|ZP_19511954.1| aspartate racemase [Enterococcus faecium E1630]
gi|431497625|ref|ZP_19514779.1| aspartate racemase [Enterococcus faecium E1634]
gi|431656302|ref|ZP_19523850.1| aspartate racemase [Enterococcus faecium E1904]
gi|431743056|ref|ZP_19531937.1| aspartate racemase [Enterococcus faecium E2071]
gi|431746247|ref|ZP_19535081.1| aspartate racemase [Enterococcus faecium E2134]
gi|431759407|ref|ZP_19548021.1| aspartate racemase [Enterococcus faecium E3346]
gi|431764182|ref|ZP_19552725.1| aspartate racemase [Enterococcus faecium E4215]
gi|431781833|ref|ZP_19569974.1| aspartate racemase [Enterococcus faecium E6012]
gi|431785789|ref|ZP_19573812.1| aspartate racemase [Enterococcus faecium E6045]
gi|447912506|ref|YP_007393918.1| Aspartate racemase [Enterococcus faecium NRRL B-2354]
gi|291589181|gb|EFF20992.1| aspartate racemase [Enterococcus faecium E1071]
gi|291590642|gb|EFF22370.1| aspartate racemase [Enterococcus faecium E1636]
gi|291596331|gb|EFF27590.1| aspartate racemase [Enterococcus faecium E1679]
gi|291600546|gb|EFF30852.1| aspartate racemase [Enterococcus faecium E1039]
gi|364092760|gb|EHM35097.1| aspartate racemase [Enterococcus faecium E4453]
gi|364094323|gb|EHM36512.1| aspartate racemase [Enterococcus faecium E4452]
gi|403037066|gb|EJY48392.1| aspartate racemase [Enterococcus faecium 504]
gi|404453502|gb|EKA00555.1| aspartate racemase [Enterococcus sp. GMD4E]
gi|404457237|gb|EKA03799.1| aspartate racemase [Enterococcus sp. GMD3E]
gi|404462721|gb|EKA08434.1| aspartate racemase [Enterococcus sp. GMD2E]
gi|404469213|gb|EKA14032.1| aspartate racemase [Enterococcus sp. GMD1E]
gi|410734378|gb|EKQ76298.1| aspartate racemase [Enterococcus sp. GMD5E]
gi|425722916|gb|EKU85807.1| aspartate racemase [Enterococcus durans FB129-CNAB-4]
gi|430443176|gb|ELA53173.1| aspartate racemase [Enterococcus faecium E0120]
gi|430446023|gb|ELA55722.1| aspartate racemase [Enterococcus faecium E0164]
gi|430484290|gb|ELA61311.1| aspartate racemase [Enterococcus faecium E0269]
gi|430486476|gb|ELA63312.1| aspartate racemase [Enterococcus faecium E0679]
gi|430489089|gb|ELA65722.1| aspartate racemase [Enterococcus faecium E0680]
gi|430492452|gb|ELA68866.1| aspartate racemase [Enterococcus faecium E0688]
gi|430537363|gb|ELA77706.1| aspartate racemase [Enterococcus faecium E1185]
gi|430546021|gb|ELA85987.1| aspartate racemase [Enterococcus faecium E1552]
gi|430552707|gb|ELA92435.1| aspartate racemase [Enterococcus faecium E1573]
gi|430553237|gb|ELA92938.1| aspartate racemase [Enterococcus faecium E1574]
gi|430557736|gb|ELA97173.1| aspartate racemase [Enterococcus faecium E1575]
gi|430557923|gb|ELA97359.1| aspartate racemase [Enterococcus faecium E1576]
gi|430561432|gb|ELB00700.1| aspartate racemase [Enterococcus faecium E1578]
gi|430573836|gb|ELB12614.1| aspartate racemase [Enterococcus faecium E1622]
gi|430575750|gb|ELB14447.1| aspartate racemase [Enterococcus faecium E1620]
gi|430578739|gb|ELB17291.1| aspartate racemase [Enterococcus faecium E1623]
gi|430582010|gb|ELB20445.1| aspartate racemase [Enterococcus faecium E1626]
gi|430588560|gb|ELB26752.1| aspartate racemase [Enterococcus faecium E1634]
gi|430589474|gb|ELB27602.1| aspartate racemase [Enterococcus faecium E1630]
gi|430600551|gb|ELB38191.1| aspartate racemase [Enterococcus faecium E1904]
gi|430607420|gb|ELB44740.1| aspartate racemase [Enterococcus faecium E2071]
gi|430609016|gb|ELB46222.1| aspartate racemase [Enterococcus faecium E2134]
gi|430626207|gb|ELB62793.1| aspartate racemase [Enterococcus faecium E3346]
gi|430631367|gb|ELB67689.1| aspartate racemase [Enterococcus faecium E4215]
gi|430646948|gb|ELB82409.1| aspartate racemase [Enterococcus faecium E6045]
gi|430648687|gb|ELB84091.1| aspartate racemase [Enterococcus faecium E6012]
gi|445188215|gb|AGE29857.1| Aspartate racemase [Enterococcus faecium NRRL B-2354]
Length = 243
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 170 IVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLS 229
IV+ C+ +H + ++ IP LH+ A EL + + R+ +L T+ ++
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL-------VRQHTTGRVAILGTEGSMK 132
Query: 230 AGFYQEKLQNQGFEVVLPDKATME---HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRA 286
AG Y+ +++N GFE V+PD E ++I I+ ++ + E +L ++ L
Sbjct: 133 AGIYEREVKNLGFETVIPDTVLQEKINYLIYHEIKESDYLNQELYYEILEEAVERL---N 189
Query: 287 VNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNK 330
VI+G E+ + + ID LA T+ A + +
Sbjct: 190 CEKVILGCTELSLMHEFAEDNHYPVIDAQSILADRTIERALAER 233
>gi|407473904|ref|YP_006788304.1| aspartate racemase [Clostridium acidurici 9a]
gi|407050412|gb|AFS78457.1| aspartate racemase [Clostridium acidurici 9a]
Length = 237
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 102/239 (42%), Gaps = 50/239 (20%)
Query: 81 QANTIGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECP---------PFVVCNDPALN 126
+ TIG++ G+ ST FL ++ Y AK + P PF + D ++
Sbjct: 2 KTATIGVLSGMGPRSTSPFLELILDECQRQYGAKYDIDYPHIIIYSLPTPFYI--DRKID 59
Query: 127 EELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSE 186
EEL S+ K LE GA I +PC+ +H + +++
Sbjct: 60 EELLKNSIKEGIEK---------------------LESCGADVIAVPCNSAHQYFEYITK 98
Query: 187 GCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVL 246
+P L++ E L S R+ +LAT+ T+++G YQEK++ + E V
Sbjct: 99 DIKVPVLNIIEETT----------LLLESRTRVTILATEITMTSGLYQEKIKEKDCEFVF 148
Query: 247 PDKATM-EHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD 304
+ + + II I++ + AR L + I+ + V+ +II ++ V+ K+
Sbjct: 149 IKEWQLCINEIILKIKS--QESLSEARVLWKKLIEEIYCEDVDTIIIACTDLNVVIDKE 205
>gi|433639194|ref|YP_007284954.1| aspartate racemase [Halovivax ruber XH-70]
gi|433290998|gb|AGB16821.1| aspartate racemase [Halovivax ruber XH-70]
Length = 247
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 95/237 (40%), Gaps = 47/237 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
T+GI+GG+S ST + + D A+ +EL + L ++V
Sbjct: 13 TVGILGGMSSESTREYYRGI------------------DEAIGDELGGHNAGDLVIRSVN 54
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCI--------------VMPCHISHAWHGDVSEGCS 189
I + + ++AG R + VM + H + E S
Sbjct: 55 FAEIERCIRTDQ------WDRAGDRLVDAALAIEAAGADFVVMATNTMHRVAPRLVEALS 108
Query: 190 IPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK 249
IPF+H+ + A+ ++ L+ IGVL T A + FY ++ + G E ++PD
Sbjct: 109 IPFVHIVDVAAEAIRADGLET--------IGVLGTAAVMEGAFYHDRFADHGIETLVPDA 160
Query: 250 ATMEHVIIPTIEALNHRD-MEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
E V E L H + + +R I L+ R V++G E++ ++ + D
Sbjct: 161 DDREAVDRIIFEELTHGEVLADSRERYLELIDDLVARGAEGVVLGCTEIELLVSQTD 217
>gi|397697617|ref|YP_006535500.1| aspartate racemase protein [Pseudomonas putida DOT-T1E]
gi|397334347|gb|AFO50706.1| aspartate racemase protein [Pseudomonas putida DOT-T1E]
Length = 230
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 36/175 (20%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL--FHAS---VHSLKS 139
IG+IGG+S + G V+Y + +N+ L H++ +HS+
Sbjct: 4 IGLIGGMS------YEGSAVYYRELN------------RGINQRLGGLHSAQILLHSVDF 45
Query: 140 KTVQLDHIRGAVSQ---NLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
+T+ G +Q L LE AGA C+++ H V S+PF+H+
Sbjct: 46 QTIVDKQKAGEWAQAGSQLAEVAQSLENAGADCVMICAVTMHLVADAVMAATSLPFIHIV 105
Query: 197 ECVAKELK-EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
+ VA LK KPL ++AT T+ GFY ++QN G +V++PD A
Sbjct: 106 DVVADRLKLVGHKKPL---------LIATRYTMENGFYPARMQNHGIDVLVPDSA 151
>gi|423487357|ref|ZP_17464039.1| aspartate racemase [Bacillus cereus BtB2-4]
gi|423493079|ref|ZP_17469723.1| aspartate racemase [Bacillus cereus CER057]
gi|423500128|ref|ZP_17476745.1| aspartate racemase [Bacillus cereus CER074]
gi|423662930|ref|ZP_17638099.1| aspartate racemase [Bacillus cereus VDM022]
gi|401154458|gb|EJQ61875.1| aspartate racemase [Bacillus cereus CER057]
gi|401155764|gb|EJQ63172.1| aspartate racemase [Bacillus cereus CER074]
gi|401297085|gb|EJS02699.1| aspartate racemase [Bacillus cereus VDM022]
gi|402436966|gb|EJV68991.1| aspartate racemase [Bacillus cereus BtB2-4]
Length = 232
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 107/261 (40%), Gaps = 46/261 (17%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKS-- 139
TIG+IGG+S ST + LNEE+ +HS K
Sbjct: 3 TIGLIGGMSWESTSEYY----------------------RILNEEIKSRLGGLHSAKCLI 40
Query: 140 KTVQLDHIR--------GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
+V + I + L + L++ GA I++ + H + E +IP
Sbjct: 41 NSVDFEEIERFQSNGDWDGAGEVLGNAAYSLQKGGADFIIICTNTMHKVVEKIKENINIP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ + AKE+K ++ IG+L T T+ FY+ +++ +V++P +
Sbjct: 101 VLHIADTTAKEIKRKGIQT--------IGLLGTKYTMEQDFYKSRIEENNIKVIVPVEKN 152
Query: 252 MEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK 309
E + II T E + +R + I+ L+ + +I+G E+ G+L K + +L
Sbjct: 153 REKINEIIYT-ELCLGKITSQSREYYKRVIEELVQKGAQGIILGCTEI-GLLIKQEDVLV 210
Query: 310 KCIDPMDALARSTVTWARSNK 330
D A V A N+
Sbjct: 211 PIFDTTFIHAMEAVNVALENR 231
>gi|392961931|ref|ZP_10327378.1| aspartate racemase [Pelosinus fermentans DSM 17108]
gi|421056214|ref|ZP_15519141.1| aspartate racemase [Pelosinus fermentans B4]
gi|421058031|ref|ZP_15520770.1| aspartate racemase [Pelosinus fermentans B3]
gi|421065643|ref|ZP_15527363.1| aspartate racemase [Pelosinus fermentans A12]
gi|421072807|ref|ZP_15533911.1| aspartate racemase [Pelosinus fermentans A11]
gi|392438630|gb|EIW16453.1| aspartate racemase [Pelosinus fermentans B4]
gi|392445234|gb|EIW22566.1| aspartate racemase [Pelosinus fermentans A11]
gi|392452689|gb|EIW29594.1| aspartate racemase [Pelosinus fermentans DSM 17108]
gi|392458439|gb|EIW34973.1| aspartate racemase [Pelosinus fermentans A12]
gi|392461633|gb|EIW37805.1| aspartate racemase [Pelosinus fermentans B3]
Length = 233
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 80/172 (46%), Gaps = 35/172 (20%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVH---SLKSK 140
+IGIIGG+ +T + K++ + D ++E H + ++ +
Sbjct: 4 SIGIIGGMGSLATCDLFKKIIDMT--------------DAKCDQEHIHICIDCNTNIPDR 49
Query: 141 TVQL-----DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
T + D I V +R L+ GA ++MPC+ +H ++ ++ IP L++
Sbjct: 50 TKAILGGGKDPIPEMVRSGVR-----LQSMGADVLIMPCNTAHYFYDKITPFFDIPLLNM 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ +E++ K++ +IG+LATD T+ + Y L + G ++V+P
Sbjct: 105 LKETVQEIQRRKIR--------KIGLLATDGTIKSRVYHTALADAGIDLVIP 148
>gi|384182567|ref|YP_005568329.1| aspartate racemase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324328651|gb|ADY23911.1| aspartate racemase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 224
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 37/253 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I+GA LE GA I MPC+ +H + ++ SIP L+
Sbjct: 59 MKKAI----IKGAQK---------LESTGASFIAMPCNTAHLYFEELQRSLSIPILN--- 102
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ E +A K ++ R+ +LAT+AT+ AG YQ+ + + E + T + +I
Sbjct: 103 -IVDETLQAIPKNVK-----RVALLATEATVQAGIYQDGITKRDIEYI--HHETWQEMIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L V+ II ++ V +D +C+ A
Sbjct: 155 QIITWIKSGEIEEARELWN-ALVLKLREEVDTAIIACTDLNVVASEDFVDSSQCL--AKA 211
Query: 318 LARSTVTWARSNK 330
+ R V R +K
Sbjct: 212 IVRMYVENIRGSK 224
>gi|295688081|ref|YP_003591774.1| aspartate racemase [Caulobacter segnis ATCC 21756]
gi|295429984|gb|ADG09156.1| aspartate racemase [Caulobacter segnis ATCC 21756]
Length = 236
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 100/235 (42%), Gaps = 32/235 (13%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYSAKD----AEECPPFVVCNDPALNEELFHASV 134
+ + IG+IGG+S S+ + +LV + +D + D A E L HA
Sbjct: 1 MTEQALIGLIGGMSWESSAQYY-RLVNEAVRDRLGGVASARTLMWSFDFAEIERLQHAGQ 59
Query: 135 HSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH 194
+S+ L LE GA +V+ + H + IP LH
Sbjct: 60 WP-------------ELSRRLADAARALEAGGADFLVLCTNTMHREAETIEAAVRIPLLH 106
Query: 195 VGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLP---DKA 250
+ + + +K A L +G+L T T+ FY+ +L+ Q G V+ P D+A
Sbjct: 107 IADPTGEAIKAAGLST--------VGLLGTAFTMEHDFYRGRLETQHGLTVLTPEAEDRA 158
Query: 251 TMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
+ +I E + R ++ +R + R I+ L+ R A+I+G E+ ++ + D
Sbjct: 159 AVHRIIYE--ELVAGRVLDASREVYRAVIERLVARGAEAIILGCTEIMLLIGQAD 211
>gi|422856752|ref|ZP_16903408.1| aspartate racemase [Streptococcus sanguinis SK1]
gi|327460111|gb|EGF06450.1| aspartate racemase [Streptococcus sanguinis SK1]
Length = 230
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASVHSLKSK 140
TIG+IGG+S ST ++ + + N+ E L A +
Sbjct: 2 KTIGLIGGMSWESTTSY-----------------YQIINETIKKELGGLHSAKILLYSVD 44
Query: 141 TVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+++H + Q L LEQAGA IV+ + H + E +IP LH+
Sbjct: 45 FAEIEHYQAVGDWEKSGQLLADVAKRLEQAGADFIVICTNTMHKVAPQIQEQIAIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ A+ L ++ R+G+L T T++ FY+EKL G EV++PD+A + V
Sbjct: 105 AQATAQALLADGIQ--------RVGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEV 156
Query: 256 IIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK 303
+ L D+ E ++ I L AVI+G E+ G+L K
Sbjct: 157 NRIIYDELCLGDIKESSKQTYLAVIDDLKKAGAEAVILGCTEI-GLLVK 204
>gi|218236145|ref|YP_002369551.1| aspartate racemase [Bacillus cereus B4264]
gi|218164102|gb|ACK64094.1| aspartate racemase family protein [Bacillus cereus B4264]
Length = 224
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 110/256 (42%), Gaps = 45/256 (17%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVARCQIIYGAKYDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH-VG 196
K + I GA LE GA I MPC+ +H + ++ SIP L+ V
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQHSLSIPILNIVD 105
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHV 255
E + K AK R+ +LAT+AT+ AG YQ+ + + E + +K TM +
Sbjct: 106 ETLQAIPKNAK----------RVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQ 155
Query: 256 IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPM 315
II I++ ++E AR L + + L V+ II ++ V ++ +D
Sbjct: 156 IITYIKS---GEVEKARKLWS-ALVVQLKDEVDTAIIACTDLNVVASEN------FVDSS 205
Query: 316 DALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 206 QCLAKAVVRMYLSNIK 221
>gi|345014876|ref|YP_004817230.1| aspartate racemase [Streptomyces violaceusniger Tu 4113]
gi|344041225|gb|AEM86950.1| aspartate racemase [Streptomyces violaceusniger Tu 4113]
Length = 238
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+AGA I + H + SIPFLH+ + +A + + + L G+
Sbjct: 71 LERAGADFIACGSNTMHRVAPAIEAAVSIPFLHIADVIAHAAHQTRARTL--------GL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPTIEALNHRDMEGARNLLRIG 278
L T + A FY+++L + G V+P D+ ++ +I + D A+ LR+
Sbjct: 123 LGTLPVMEANFYRDRLADHGLSAVVPEQDDRTLVDRIIFDELTRNIFTDDSRAQ-YLRV- 180
Query: 279 IQLLLVRAVNAVIIGSDEM-QGVLPKDDPLL 308
++ L R +A+I+G E+ Q + P+D P L
Sbjct: 181 MEQLAARGADAIILGCTEITQLIGPQDFPSL 211
>gi|398879859|ref|ZP_10634941.1| aspartate racemase [Pseudomonas sp. GM67]
gi|398195309|gb|EJM82358.1| aspartate racemase [Pseudomonas sp. GM67]
Length = 230
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 12/167 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE GA C+V+ + H G + +IPFLH+ + A ++AG+ + +G+
Sbjct: 71 LEAGGADCVVLCTNTMHKVAGQIQAAINIPFLHIAD-------PAGQAAVDAGA-LNVGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATME--HVIIPTIEALNHRDMEGARNLLRIGI 279
L T T+ F +E+L + G V++PD + H II E E +R + R I
Sbjct: 123 LGTAFTMEQDFLKERLTSMGLTVLVPDAEERQAVHRIIYD-ELCVGVISEASRRIYRQVI 181
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWA 326
+ L R +I+G E+ G+L K + +D + A++ V +A
Sbjct: 182 ESLSQRGAQVIILGCTEI-GLLIKPEHSTLPLLDTTELHAQAAVAFA 227
>gi|264679908|ref|YP_003279817.1| aspartate racemase [Comamonas testosteroni CNB-2]
gi|262210423|gb|ACY34521.1| aspartate racemase [Comamonas testosteroni CNB-2]
Length = 242
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Query: 163 EQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVL 222
+ GA C+++ + H V+ SIPFLH+ + V + A ++ L G+L
Sbjct: 83 QAGGADCVLLCTNTMHKVADQVAAAVSIPFLHIADPVGATARAAGVQVL--------GLL 134
Query: 223 ATDATLSAGFYQEKLQNQ-GFEVVLP---DKATMEHVIIPTIEALNHRDMEGARNLLRIG 278
T T+ F +E+L+ Q G +V++P ++A + +I + A D+ +R L +
Sbjct: 135 GTRFTMEQPFMRERLEQQFGLKVLVPGEAERAQVHRIIYEELCAGQISDV--SRKLYQRA 192
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
I+ L R AV++G E+ ++ +D +L
Sbjct: 193 IESLAARGAQAVVLGCTEIGLLIKSEDSVL 222
>gi|221133453|ref|ZP_03559758.1| hypothetical protein GHTCC_00865 [Glaciecola sp. HTCC2999]
Length = 230
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L QAGA IV+ + H D++ +IP LH+ + + L E +K ++G+
Sbjct: 71 LAQAGADSIVICTNTMHKLAPDIAAQVNIPLLHIADATGQALVEQGIK--------QVGL 122
Query: 222 LATDATLSAGFYQEKLQNQ-GFEVVLPDKATME--HVIIPTIEALNHRDMEGARNLLRIG 278
L T T+ FY +L N+ G EV+ PD+ + H II L H + +R++ +
Sbjct: 123 LGTRFTMEQDFYASRLLNKYGIEVITPDQTGRDAVHQIIYEELCLGHIHTQ-SRSIYQHV 181
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKDD 305
+ L + AVI+G E+ +L + D
Sbjct: 182 VAKLADQGAQAVILGCTEIGLLLQQSD 208
>gi|423617522|ref|ZP_17593356.1| aspartate racemase [Bacillus cereus VD115]
gi|401255722|gb|EJR61940.1| aspartate racemase [Bacillus cereus VD115]
Length = 232
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 109/266 (40%), Gaps = 56/266 (21%)
Query: 84 TIGIIGGVSVSSTLNF-----------LGKLVWYSAK------DAEECPPFVVCNDPALN 126
TIG+IGG+S ST + LG+L +SAK D EE F D
Sbjct: 3 TIGLIGGMSWESTSEYYRILNEEIKSRLGRL--HSAKCLINSVDFEEIERFQSNGDWDEA 60
Query: 127 EELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSE 186
E+ + +SL ++ GA I++ + H + E
Sbjct: 61 GEVLGNAAYSL-------------------------QKGGADFIIICTNTMHKVVEKIKE 95
Query: 187 GCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVL 246
+IP LH+ + AKE+K ++ IG+L T T+ FY+ +++ +V++
Sbjct: 96 NITIPVLHIADTTAKEIKRKGIQT--------IGLLGTKYTMEQDFYKSRIEENNIKVIV 147
Query: 247 PDKATMEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD 304
P + E + II T E + +R + I+ L+ + +I+G E+ G+L K
Sbjct: 148 PVEKNREKLNEIIYT-ELCLGKITSQSREYYKRVIEELVQKGAQGIILGCTEI-GLLIKQ 205
Query: 305 DPLLKKCIDPMDALARSTVTWARSNK 330
+ ++ D A V A N+
Sbjct: 206 EDVVVPIFDTTFIHAMEAVNVALGNR 231
>gi|392425707|ref|YP_006466701.1| aspartate racemase [Desulfosporosinus acidiphilus SJ4]
gi|391355670|gb|AFM41369.1| aspartate racemase [Desulfosporosinus acidiphilus SJ4]
Length = 229
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE +GA I++ + H ++ G IP LH+ + A+EL + G V +G+
Sbjct: 71 LEASGADFIIICTNTMHKVADEIRAGIHIPLLHIADVTAQEL-------ISNGINV-VGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPTIEALNHRDMEGARNLLRIG 278
L T T+ FY+ +L+ QG V++P D+ + VI + L + + N RI
Sbjct: 123 LGTRYTMEQDFYKSRLEAQGINVLIPQETDREIINDVIFNEL-CLGYLLEDSRVNYKRI- 180
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWA 326
IQ L+ + +++G E+ G+L K + D + A+ V +A
Sbjct: 181 IQDLIEQGAKGIVLGCTEI-GLLVKPEDSTVPLFDTTELHAKEAVNFA 227
>gi|354598561|ref|ZP_09016578.1| aspartate racemase [Brenneria sp. EniD312]
gi|353676496|gb|EHD22529.1| aspartate racemase [Brenneria sp. EniD312]
Length = 232
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 38/234 (16%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEE---------LFHAS 133
T+G+IGG+S ST+ P + N+ N L+
Sbjct: 2 KTLGLIGGMSWESTV-----------------PYYRTINEYVKNRLGGLHSARLILYSVD 44
Query: 134 VHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
H ++ Q D + A + L L +AGA IV+ + H V +P L
Sbjct: 45 FHDIERCQSQGDWQQAA--RALSDIAVVLRKAGAEAIVICTNTMHKVADAVEHASQLPLL 102
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATM 252
H+ + + + ++ ++G+L T T+ FY+E+++ + G EV++PD++
Sbjct: 103 HIADATGENIYRQGIR--------KVGLLGTRYTMEQDFYRERIRRRYGIEVIIPDRSGR 154
Query: 253 EHVIIPTIEALNHRDME-GARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
E + L ++ G+R R I+ L + +I+G E+ +L DD
Sbjct: 155 ETINRIIFNELCQGKIDAGSRRKYREIIKGLEQQGAEGIILGCTEIPLLLSADD 208
>gi|213416637|ref|ZP_03349781.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 120
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE AGA CIV+PC+ +H W D+ +V + + +A L + S +G+
Sbjct: 41 LEDAGAECIVIPCNTAHYWFDDLQ--------NVAKARMISILDATLGDIPP-SARHVGL 91
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKA 250
LAT+ATL+ G YQ+K +G ++ P+ A
Sbjct: 92 LATNATLATGLYQKKALARGLTLIQPEDA 120
>gi|390434663|ref|ZP_10223201.1| aspartate racemase [Pantoea agglomerans IG1]
Length = 243
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 29/170 (17%)
Query: 84 TIGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPALNEELFHASVHSLK 138
+IG++ G+ ST F+ LV Y AK + P + + P
Sbjct: 4 SIGVLAGMGPRSTAPFVDMLVTDCYIGYGAKYDMDFPKMHIISLP----------TPFWP 53
Query: 139 SKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCS-IPFLHVGE 197
K V + + + Q + L +A I +PC+++H + ++ S IP LH+ +
Sbjct: 54 GKKVDDNAMIATLQQGITE----LVRAKVSLIAVPCNLAHCYFAEMKAVSSGIPLLHIAD 109
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
+ L P EA RI VLAT+ TL AGFYQ +++ G E++ P
Sbjct: 110 IALESL------PAEA---TRIAVLATEPTLEAGFYQARIEASGKEIIDP 150
>gi|159044742|ref|YP_001533536.1| aspartate/glutamate racemase family protein [Dinoroseobacter shibae
DFL 12]
gi|157912502|gb|ABV93935.1| aspartate/glutamate racemase family protein [Dinoroseobacter shibae
DFL 12]
Length = 229
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAK--DAEECPPFVVCNDPALNEELFHASVHSLKSK 140
TIGI+GG+S +ST + +L + P ++ + E A+ ++
Sbjct: 2 KTIGILGGMSAASTQLYYSELCRLTRARLGGLHSPQLLIRSLDFAEIEALQAAGAWTRAG 61
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
T+ L + LE+ GA +++ + H + EG IP LH+ + A
Sbjct: 62 TI------------LNSEAQALERGGAGILLLATNTMHKLADRMMEGVGIPLLHIADATA 109
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVI 256
+ + +A L+ R G++AT T+ FY +L+ G + VLP D+AT VI
Sbjct: 110 QAILQAGLR--------RPGLMATAFTMEQQFYTGRLRAAGLDPVLPDPSDRATTHRVI 160
>gi|423377396|ref|ZP_17354680.1| aspartate racemase [Bacillus cereus BAG1O-2]
gi|423440505|ref|ZP_17417411.1| aspartate racemase [Bacillus cereus BAG4X2-1]
gi|423532921|ref|ZP_17509339.1| aspartate racemase [Bacillus cereus HuB2-9]
gi|401639205|gb|EJS56945.1| aspartate racemase [Bacillus cereus BAG1O-2]
gi|402419648|gb|EJV51927.1| aspartate racemase [Bacillus cereus BAG4X2-1]
gi|402464643|gb|EJV96333.1| aspartate racemase [Bacillus cereus HuB2-9]
Length = 224
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDIDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE AG I MPC+ +H + ++ SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESAGVDFIAMPCNTAHLYFEELQHSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K + +I
Sbjct: 106 ETLRAIPE---------TVKRVALLATEATVQAGIYQDGIAKRNIEYLHNEK--WQEMIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L ++ II ++ V +D +D
Sbjct: 155 QIITCIKSGEVEEARKLWS-ALVLQLKDEIDTAIIACTDLNVVASED------FVDSAQC 207
Query: 318 LARSTVTWARSNKK 331
LA + V SN K
Sbjct: 208 LAEAVVWMYLSNTK 221
>gi|421602940|ref|ZP_16045435.1| aspartate racemase [Bradyrhizobium sp. CCGE-LA001]
gi|404264947|gb|EJZ30132.1| aspartate racemase [Bradyrhizobium sp. CCGE-LA001]
Length = 229
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 26/169 (15%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDA----EECPPFVVCNDPALNEELFHASVHSLK 138
TIG+IGG+S ST ++ KL+ +D P + D +E+ +A S
Sbjct: 2 RTIGLIGGMSWESTAHYY-KLINERVRDRMGKLHSAPLLMYSYDFQGIKEMQYAGRWSEA 60
Query: 139 SKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
+ ++ V++ L E AGAR IV+ + H ++ ++PF+H+G+
Sbjct: 61 AASL------AEVARRL-------ENAGARAIVLCTNTMHKVAPEIISSLTVPFIHIGDA 107
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
A+ ++ + R+G+L T T+ FY ++L+ +V++P
Sbjct: 108 TAQRIRSKGYR--------RVGLLGTKFTMEEQFYIDRLRAHDLDVLIP 148
>gi|372324160|ref|ZP_09518749.1| Aspartate racemase [Oenococcus kitaharae DSM 17330]
gi|366982968|gb|EHN58367.1| Aspartate racemase [Oenococcus kitaharae DSM 17330]
Length = 236
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 30/253 (11%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSL-KSK 140
N GI+GG+ +T F+ + + A+ ++ ++V N A+ + + + L +SK
Sbjct: 3 NFFGILGGMGTRATEAFIDSINQLARAQKDQDYLNYIVFNHAAIPDR----TAYILGRSK 58
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
L + V Q + Q I++ C+ +H + + + +P L + A
Sbjct: 59 KNPLPFLIEDVQQ--------MNQLSPDFILITCNTAHYFLPQLQKAAHMPILDMPSLAA 110
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI 260
K+ K L R+G+LAT T+ A YQ + G++ +LPD + V+
Sbjct: 111 AACKQFSSKNL------RVGLLATSGTIDAAIYQPHIAALGYQTILPDPVWQQKVM---- 160
Query: 261 EALNHRDMEGARNLLRIGI-----QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPM 315
+ ++D++ A + R+ +L+ + VI+ E+ ++ + ID
Sbjct: 161 -DVIYKDVKEADQVNRVRFHALIEHMLIDEKCDCVILACTELSVAQQREAYESDRVIDAQ 219
Query: 316 DALARSTVTWARS 328
LAR V ARS
Sbjct: 220 QLLARRAVQLARS 232
>gi|228991217|ref|ZP_04151175.1| Aspartate racemase [Bacillus pseudomycoides DSM 12442]
gi|228768441|gb|EEM17046.1| Aspartate racemase [Bacillus pseudomycoides DSM 12442]
Length = 243
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVR-IG 220
LE+AGA IV+ + H ++ + SIP LH+ + A E+K+ G+R +G
Sbjct: 74 LEKAGADFIVICTNTMHKVISNIKDKVSIPILHIADATAMEIKK---------QGIRSVG 124
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV--IIPTIEALNHRDMEGARNLLRIG 278
+L T T+ FY+ +++ +G V++P++ E V II L + + +R+ +
Sbjct: 125 LLGTKYTMEQDFYKSRIEEKGMRVMIPNETDRELVNRIIYNELCLGKVN-QTSRDSYKEI 183
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKDDP 306
I + V +I+G E+ ++ ++D
Sbjct: 184 INRFVQNGVEGIILGCTEIGLLVKQEDS 211
>gi|16127508|ref|NP_422072.1| aspartate racemase [Caulobacter crescentus CB15]
gi|221236323|ref|YP_002518760.1| aspartate racemase [Caulobacter crescentus NA1000]
gi|13424970|gb|AAK25240.1| aspartate racemase [Caulobacter crescentus CB15]
gi|220965496|gb|ACL96852.1| aspartate racemase [Caulobacter crescentus NA1000]
Length = 253
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 24/244 (9%)
Query: 66 AASLLRSKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPAL 125
AA LR+ + +++ IG+IGG+S S+ + +L+ +A V + L
Sbjct: 4 AARALRTDDAERAMSEQALIGLIGGMSWESSAQYY-RLI----NEAVRARLGGVASARTL 58
Query: 126 NEELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVS 185
A + SL+ + +S+ L LE GA +V+ + H ++
Sbjct: 59 MWSFDFAEIESLQHAGRWPE-----LSRRLADAARALEAGGADFLVLCTNTMHREADEIE 113
Query: 186 EGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEK-LQNQGFEV 244
IP LH+ + + +K A L +G+L T T+ FY+ + L+ G V
Sbjct: 114 AAVHIPLLHIADPTGEAIKAAGLST--------VGLLGTAFTMEHDFYRGRLLKKHGLSV 165
Query: 245 VLP---DKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL 301
+ P D+A + +I E + R ++ +R R I L+ R A+I+G E+ ++
Sbjct: 166 LTPDADDRAIVHRIIYE--ELVAGRVLDASREAYRAVIARLVDRGAEAIILGCTEIMLLV 223
Query: 302 PKDD 305
+ D
Sbjct: 224 SQAD 227
>gi|206977308|ref|ZP_03238205.1| probable amino-acid racemase [Bacillus cereus H3081.97]
gi|206744459|gb|EDZ55869.1| probable amino-acid racemase [Bacillus cereus H3081.97]
Length = 224
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 105/252 (41%), Gaps = 41/252 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ + SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQQSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K + +I
Sbjct: 106 ETLQAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHHEK--WQDMIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + +E AR L + L L V+ II ++ V +D +D
Sbjct: 155 QIITYIKSGKVEEARELWN-ALVLQLREEVDTAIIACTDLNVVAIED------FVDSSQC 207
Query: 318 LARSTVTWARSN 329
LA++ V N
Sbjct: 208 LAKAVVRMYVEN 219
>gi|229175471|ref|ZP_04302982.1| amino-acid racemase [Bacillus cereus MM3]
gi|228608003|gb|EEK65314.1| amino-acid racemase [Bacillus cereus MM3]
Length = 224
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 106/252 (42%), Gaps = 41/252 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P +
Sbjct: 2 IGILAGMGPKSTAPFVDTVVAGCQTIYGAKHDIDFPHMMIYSCPTPFYMDR--------- 52
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
+DH A+ + + LE G I MPC+ +H + ++ SIP L++ +
Sbjct: 53 -----PIDH--EAMKKAIIEGAQKLESTGVSFIAMPCNTAHLYFEELQRSISIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ + E + ++ +LAT+AT+ AG YQ+ + + E + +K + +I
Sbjct: 106 ETLQAIPE---------TAKKVTLLATEATIQAGIYQDGITKRNIEYIHHEK--WQEMIS 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L V+ VII ++ V +D +D
Sbjct: 155 QIITFIKSGEVEEARELWN-ALVLQLREEVDTVIIACTDLNVVASED------FVDSSQC 207
Query: 318 LARSTVTWARSN 329
LA++ V N
Sbjct: 208 LAKAVVRMYVEN 219
>gi|196044013|ref|ZP_03111250.1| probable amino-acid racemase [Bacillus cereus 03BB108]
gi|229187012|ref|ZP_04314163.1| amino-acid racemase [Bacillus cereus BGSC 6E1]
gi|196025349|gb|EDX64019.1| probable amino-acid racemase [Bacillus cereus 03BB108]
gi|228596464|gb|EEK54133.1| amino-acid racemase [Bacillus cereus BGSC 6E1]
Length = 224
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 105/252 (41%), Gaps = 41/252 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ + SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFKELQQSISIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K + I
Sbjct: 106 ETLQVIPE---------NTKRVALLATEATVQAGIYQDGIAKRNIEYIHHEK--WQESIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L V+ II ++ V +D +D
Sbjct: 155 QIISCIKGGEIEKARELWN-ALVLQLKDEVDTAIIACTDLNVVASED------FVDSSQC 207
Query: 318 LARSTVTWARSN 329
LA++ V N
Sbjct: 208 LAKAVVRMYVEN 219
>gi|404402664|ref|ZP_10994248.1| aspartate racemase [Pseudomonas fuscovaginae UPB0736]
Length = 230
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 22/175 (12%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L+ GA C+V+ + H + SIPFLH+ A +A L A R+G+
Sbjct: 71 LQAGGAECVVLCTNTMHRLAQQIEGAVSIPFLHI----ATPTGQAAL----ARGATRVGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATME--HVIIPT---IEALNHRDMEGARNLLR 276
L T T+ F +++L QG EV++P+ + H II + +N E +R + +
Sbjct: 123 LGTAFTMEQDFLKQRLVAQGLEVLIPETEQRQAVHRIIYDELCVGVIN----EQSRQVYQ 178
Query: 277 IGIQLLLVRAVNAVIIGSDEMQGVL--PKDDPLLKKCIDPMDALARSTVTWARSN 329
I+ L R A+I+G E+ G+L P+ PL +D + A + V +A N
Sbjct: 179 RVIEGLAARGAEAIILGCTEI-GLLIKPEHSPL--PLLDTTELHALAAVDFALGN 230
>gi|398840596|ref|ZP_10597830.1| aspartate racemase [Pseudomonas sp. GM102]
gi|398110178|gb|EJM00086.1| aspartate racemase [Pseudomonas sp. GM102]
Length = 230
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 12/170 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE GA C+V+ + H G + IPFLH+ + A L+AG+ +R+G+
Sbjct: 71 LEAGGAECVVLCTNTMHKVAGQIQAAIDIPFLHIAD-------PAGQAALDAGA-LRVGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP--DKATMEHVIIPTIEALNHRDMEGARNLLRIGI 279
L T T+ F + +L +G V++P D+ H II E E +R + + I
Sbjct: 123 LGTAFTMEQDFLKARLTAKGLTVLVPEADERLAVHRIIYD-ELCVGVISEASRQVYQRVI 181
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSN 329
+ L R A+I+G E+ G+L K + +D + A++ V +A +
Sbjct: 182 ESLTERGAQAIILGCTEI-GLLIKPEHSALPLLDTTELHAQAAVAFALGD 230
>gi|429081675|ref|ZP_19144777.1| Aspartate racemase [Cronobacter condimenti 1330]
gi|426549810|emb|CCJ70818.1| Aspartate racemase [Cronobacter condimenti 1330]
Length = 234
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 106/232 (45%), Gaps = 29/232 (12%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAE---ECPPFVVCNDPALNEELFHASVHSLKS 139
T+G++GG+S ST+ + +L+ +D+ P ++ + + E AS K+
Sbjct: 2 KTVGLLGGMSWESTIPYY-RLINEGVRDSLGGLHSAPLLLHSVDFHDIEACQASGEWEKA 60
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+ L LE+AGA+ IV+ + H + CS+PFLH+ +
Sbjct: 61 GEI------------LAQAALGLERAGAQAIVLCTNTMHKVAHQIEARCSLPFLHIADAT 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEV--VLPDKATMEHVII 257
+ ++ A L+ ++ +L T T+ FY+ +L+ QGF V ++PD+ +
Sbjct: 109 GRAIEHAGLR--------QVALLGTRYTMEQDFYRARLE-QGFGVTSLIPDETARARINQ 159
Query: 258 PTIEALNHRDMEGA-RNLLRIGIQLLLVRAVNAVIIGSDEMQGVL-PKDDPL 307
E L + A + + IQ+L + VI+G E+ +L P+D P+
Sbjct: 160 IIFEELCLGKITPASKRYFQQQIQILADQGAQGVILGCTEIGLLLGPQDCPV 211
>gi|323484480|ref|ZP_08089846.1| aspartate racemase [Clostridium symbiosum WAL-14163]
gi|323692541|ref|ZP_08106774.1| aspartate racemase [Clostridium symbiosum WAL-14673]
gi|323402258|gb|EGA94590.1| aspartate racemase [Clostridium symbiosum WAL-14163]
gi|323503407|gb|EGB19236.1| aspartate racemase [Clostridium symbiosum WAL-14673]
Length = 225
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 25/156 (16%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+AGA +V+ + H + IP +H+ E A LKE++++ ++ +
Sbjct: 66 LEKAGADYLVICTNTMHKVVPQIQTHIQIPIIHIAEATADVLKESRIR--------KVAL 117
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNH---RDM------EGAR 272
L T T++ FY++KL + G EV++P++ P IE +N+ +++ E ++
Sbjct: 118 LGTKYTMTQDFYKKKLTDAGIEVLIPEQ--------PDIETVNNVIFKELCRGVVSENSK 169
Query: 273 NLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
I L VI+G E+ ++ ++D L
Sbjct: 170 QQYLAIIDKLAAEGAQGVILGCTEIGMMISREDTQL 205
>gi|423478909|ref|ZP_17455624.1| aspartate racemase [Bacillus cereus BAG6X1-1]
gi|402426438|gb|EJV58562.1| aspartate racemase [Bacillus cereus BAG6X1-1]
Length = 222
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 31/225 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
IGI+ G+ ST F+ +V Y AK + P ++ + P F+ H +
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAGCQTIYGAKHDMDFPHMMIYSCPTP----FYMD-HPINH 56
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+ ++ I GA LE G I MPC+ +H + ++ SIP L++ +
Sbjct: 57 EAMKKAIIEGAQK---------LESTGVEFIAMPCNTAHLYFEELQRSISIPILNIVDET 107
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K + +I
Sbjct: 108 LQAIPE---------TAKRVALLATEATIQAGIYQDGIAKRNIEYIHHEK--WQEMINQI 156
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD 304
I + +++ AR L + L L V+ II ++ V +D
Sbjct: 157 ITYIKSGEIKEARKLWN-ALILQLEDEVDTAIIACTDLNVVASED 200
>gi|307250562|ref|ZP_07532504.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|307252943|ref|ZP_07534831.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|307263975|ref|ZP_07545576.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
gi|306857378|gb|EFM89492.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|306859581|gb|EFM91606.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306870664|gb|EFN02407.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
Length = 220
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 155 LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAG 214
L + LEQAGA I++ + H + E S+PFLH+ + VA +K L
Sbjct: 55 LVQQAKLLEQAGAEGILLATNTMHKVASPIVEAISVPFLHILDAVADSIKAKGL------ 108
Query: 215 SGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ +L T T+S FY + L+ +G ++PD+ T + +
Sbjct: 109 --TTVALLGTAFTMSGNFYVDGLRQRGITPLVPDEQTQQEI 147
>gi|238927053|ref|ZP_04658813.1| aspartate racemase [Selenomonas flueggei ATCC 43531]
gi|238885033|gb|EEQ48671.1| aspartate racemase [Selenomonas flueggei ATCC 43531]
Length = 230
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 40/176 (22%)
Query: 84 TIGIIGGVSVSSTLNF-----------LGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG+IGG+S ST+ + LG L +SAK C + V D E + A
Sbjct: 4 TIGLIGGMSWESTVTYYQVINETIKKQLGGL--HSAK----CILYSVDFDEI---EKYQA 54
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
S KS V L LE+AGA IV+ + H ++ IP
Sbjct: 55 SGEWDKSADV------------LSEAAQALERAGADYIVICTNTMHKVTPEIGRRIHIPI 102
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
LH+ + A +LK+ ++ ++G+L T T+ FY+ L QG EV++P+
Sbjct: 103 LHIADMTAVQLKKHGIR--------KVGLLGTKYTMQQDFYKNVLIRQGIEVIIPN 150
>gi|372270986|ref|ZP_09507034.1| aspartate racemase [Marinobacterium stanieri S30]
Length = 231
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 113/268 (42%), Gaps = 67/268 (25%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIG+IGG+S ST+ + + + + E+L + +V
Sbjct: 3 TIGLIGGMSWESTVGYYQAI------------------NRGVKEQLGGLHSAQIVLHSVD 44
Query: 144 LDHIRGAVSQNLRHKRAF-------------LEQAGARCIVMPCHISHAWHGDVSEGCSI 190
D I + L+H+ + +E GA C+++ + H +V + I
Sbjct: 45 FDPI-----EKLQHQGYWQGAADVLCDAAKSVEAGGADCVLICTNTMHKVAAEVEQSVGI 99
Query: 191 PFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDK 249
P LH+ + A+ L +K ++G+L T T+ FY+++L +Q G EVV+P++
Sbjct: 100 PLLHIADATAEVLVRDGIK--------KVGLLGTAFTMEQAFYKDRLSSQYGLEVVVPNE 151
Query: 250 ATMEHV--------IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL 301
A+ + V + I A N RD+ LR+ + L+ AVI+G E+ ++
Sbjct: 152 ASRKQVHDIIYNELCLGVINA-NSRDV-----YLRV-LAELVEEGAEAVILGCTEIGMLI 204
Query: 302 PK---DDPLLKKCIDPMDALARSTVTWA 326
+ D PL D A V WA
Sbjct: 205 NQSHTDTPLY----DTTAIHAAKAVDWA 228
>gi|422343115|ref|ZP_16424043.1| hypothetical protein HMPREF9432_00103 [Selenomonas noxia F0398]
gi|355378422|gb|EHG25602.1| hypothetical protein HMPREF9432_00103 [Selenomonas noxia F0398]
Length = 230
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 40/183 (21%)
Query: 84 TIGIIGGVSVSSTLNF-----------LGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG+IGG+S ST+ + LG L +SAK C + V D E +
Sbjct: 3 TIGLIGGMSWESTVTYYQVINETIKKQLGGL--HSAK----CILYSVDFDEI---EKYQV 53
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
S KS V L LE+AGA IV+ + H ++ IP
Sbjct: 54 SGEWDKSADV------------LSEAAQALERAGADYIVICTNTMHKVAPEIGRNIHIPI 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
LH+ + A +LK+ ++ ++G+L T T+ FY+ L QG EV++P+ A +
Sbjct: 102 LHIADMTAVQLKKHGIR--------KVGLLGTKYTMQQDFYKNILIEQGIEVLIPNDAGV 153
Query: 253 EHV 255
+ V
Sbjct: 154 DIV 156
>gi|392989311|ref|YP_006487904.1| aspartate racemase [Enterococcus hirae ATCC 9790]
gi|392336731|gb|AFM71013.1| aspartate racemase [Enterococcus hirae ATCC 9790]
Length = 239
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 170 IVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLS 229
IV+ C+ +H + ++ IP LH+ A EL + + ++ +L T+ ++
Sbjct: 80 IVLTCNTAHYFFDELQAATEIPILHMPREAANEL-------VRQNTTGKVAILGTEGSMK 132
Query: 230 AGFYQEKLQNQGFEVVLPD---KATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRA 286
AG Y+++++ GFE V+PD +A + H+I I+ ++ + E +L +
Sbjct: 133 AGIYEKEVRQLGFEAVIPDAQLQAKINHLIYHDIKESDYLNKELYYEILAEAVARF---D 189
Query: 287 VNAVIIGSDE---MQGVLPKDDPLLKKCIDPMDALARSTVTWARSNKKLTL 334
+I+G E MQ + +++ ID LA T+ A +++ T+
Sbjct: 190 CEKIILGCTELSLMQEYVGENE---YPVIDAQSILADQTIARALQHRQATI 237
>gi|308174385|ref|YP_003921090.1| aspartate racemase [Bacillus amyloliquefaciens DSM 7]
gi|307607249|emb|CBI43620.1| Aspartate racemase [Bacillus amyloliquefaciens DSM 7]
Length = 232
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 9/145 (6%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+AGA IV+ + H G + E +IP LH+ + A+++ ++ IG+
Sbjct: 71 LEKAGADFIVICTNTMHKVLGYIQEMITIPILHIADATAEQIIRQDIRS--------IGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDM-EGARNLLRIGIQ 280
L T T+ FY+ ++ + V++PD E + + L ++ + ++N+ + I
Sbjct: 123 LGTKYTMEQDFYKSRIASHDINVIVPDDDERELINNIIYQELCLGEIKQSSKNIYKKIIN 182
Query: 281 LLLVRAVNAVIIGSDEMQGVLPKDD 305
L+ R +I+G E+ ++ DD
Sbjct: 183 NLVDRGAEGIILGCTEIGLLVKADD 207
>gi|229099232|ref|ZP_04230164.1| amino-acid racemase [Bacillus cereus Rock3-29]
gi|229118246|ref|ZP_04247603.1| amino-acid racemase [Bacillus cereus Rock1-3]
gi|228665218|gb|EEL20703.1| amino-acid racemase [Bacillus cereus Rock1-3]
gi|228684213|gb|EEL38159.1| amino-acid racemase [Bacillus cereus Rock3-29]
Length = 235
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 13 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDIDFPHMMIYSCPTPFYMDRPID---HEA 69
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE AG I MPC+ +H + ++ SIP L++ +
Sbjct: 70 MKKAI----IEGAQK---------LESAGVDFIAMPCNTAHLYFEELQHSLSIPILNIVD 116
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K + +I
Sbjct: 117 ETLRAIPE---------TVKRVALLATEATVQAGIYQDGIAKRNIEYLHNEK--WQEMIN 165
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L ++ II ++ V +D +D
Sbjct: 166 QIITCIKSGEVEEARKLWS-ALVLQLKDEIDTAIIACTDLNVVASED------FVDSAQC 218
Query: 318 LARSTVTWARSNKK 331
LA + V SN K
Sbjct: 219 LAEAVVWMYLSNTK 232
>gi|168231116|ref|ZP_02656174.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|194469967|ref|ZP_03075951.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194456331|gb|EDX45170.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|205334500|gb|EDZ21264.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
Length = 235
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 40/238 (16%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL--FHAS---VHSL 137
TIG++GG+S ST+ P+ + + ++L H++ +HS+
Sbjct: 2 KTIGLLGGMSWESTI------------------PYYRLINEGIKQQLGGLHSASLLLHSV 43
Query: 138 KSKTVQLDHIRGAVSQN---LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH 194
+++ RG + L L+QAGA IV+ + H + CS+PFLH
Sbjct: 44 DFHDIEVCQRRGEWDKAGDILARAAQGLQQAGAEGIVLCTNTMHKIAHIIESRCSLPFLH 103
Query: 195 VGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLP---DKA 250
+ + + + L R+ +L T T+ FY+ +L+ Q E ++P D+A
Sbjct: 104 IADATGRAIARQGLH--------RVALLGTRYTMEQDFYRGRLEQQFAIETIVPEADDRA 155
Query: 251 TMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
+ VI E + +R+ I+ L + VI G E+ ++P+ L
Sbjct: 156 RINQVIFD--ELCQGTFTDASRHYYLQVIEQLAAQGAQGVIFGCTEIGLLVPQTQSAL 211
>gi|402555115|ref|YP_006596386.1| aspartate racemase [Bacillus cereus FRI-35]
gi|401796325|gb|AFQ10184.1| aspartate racemase [Bacillus cereus FRI-35]
Length = 225
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 41/252 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I+GA LE G I MPC+ +H + ++ SIP L+
Sbjct: 59 MKKAI----IKGAQK---------LESTGVDFIAMPCNTAHLYFEELQRSLSIPILN--- 102
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ E +A K ++ R+ +LAT+AT+ AG YQ+ + + E + T + +I
Sbjct: 103 -IVDETLQAIPKNVK-----RVALLATEATVQAGIYQDGITKRDIEYI--HHETWQEMIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + + L L V+ II ++ V +D +D
Sbjct: 155 QIITYIKSGEVEKARELWNVLV-LQLREEVDTAIIACTDLNVVASED------FVDSSQC 207
Query: 318 LARSTVTWARSN 329
LA++ V N
Sbjct: 208 LAKAVVRMYVGN 219
>gi|332654847|ref|ZP_08420589.1| aspartate racemase [Ruminococcaceae bacterium D16]
gi|332516190|gb|EGJ45798.1| aspartate racemase [Ruminococcaceae bacterium D16]
Length = 239
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 20/176 (11%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
+ +G+IGG+ +T F ++ + A+ +E ++ +D A+ + A++ +++
Sbjct: 4 DRLGVIGGMGPQATNTFYQYIIDRTDARTDQEHLSVLIFSDCAMPDRT--AAILGTQAQ- 60
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+ V + L LE AG I +PC+ SH + V E SIP +H+ A+
Sbjct: 61 ------KDEVYERLLSDARMLEGAGCTAIAVPCNTSHYFLDRVQEQISIPIVHMIRETAR 114
Query: 202 EL-KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
L + K +P G+LATD T+ G YQ + G P A + V+
Sbjct: 115 LLVSQGKKRP---------GILATDGTIRTGLYQREFAAFGIYAAAPRPAAQKQVM 161
>gi|218899907|ref|YP_002448318.1| amino acid racemase [Bacillus cereus G9842]
gi|423560735|ref|ZP_17537011.1| aspartate racemase [Bacillus cereus MSX-A1]
gi|218545086|gb|ACK97480.1| probable amino-acid racemase [Bacillus cereus G9842]
gi|401203272|gb|EJR10112.1| aspartate racemase [Bacillus cereus MSX-A1]
Length = 224
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 106/254 (41%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P +
Sbjct: 2 IGILAGMGPKSTGPFVDTVVARCQTIYGAKHDMDFPHMMIYSCPTPFYMDR--------- 52
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
+DH GA+ + + LE G I MPC+ +H + ++ SIP L++ +
Sbjct: 53 -----PIDH--GAMKKAIIDGAQKLESTGVSFIAMPCNTAHLYFEELQRSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ + E + R+ +LAT+AT+ A YQ+ + + E + +K + I
Sbjct: 106 ETLQAIPE---------NTKRVALLATEATVQARIYQDGIAKRNIEYIHHEK--WQESIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L ++ II ++ V +D +D
Sbjct: 155 QIITCIKSGEIEEARELWNTLV-LQLRDEIDTAIIACTDLNVVASED------FVDSSQC 207
Query: 318 LARSTVTWARSNKK 331
LA + V SNKK
Sbjct: 208 LADAVVEMYLSNKK 221
>gi|116252958|ref|YP_768796.1| aspartate racemase [Rhizobium leguminosarum bv. viciae 3841]
gi|115257606|emb|CAK08703.1| putative aspartate racemase [Rhizobium leguminosarum bv. viciae
3841]
Length = 239
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 76/146 (52%), Gaps = 13/146 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEA-KLKPLEAGSGVRIG 220
L+ AGA CI++ + H V+E S+P +H+ + AK L A + +PL
Sbjct: 71 LQIAGAGCILICTNTMHLIADKVAEKISVPLIHIIDETAKSLHAAGRKRPL--------- 121
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKA--TMEHVIIPTIEALNHRDMEGARNLLRIG 278
+LAT T+ GFY +++++ GF++++PD + T H II E + ++ +R L
Sbjct: 122 LLATRYTMEHGFYSDRMKSLGFDIMVPDASDRTTVHDIIFN-ELCAGKVLDSSRQKLFDV 180
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKD 304
I + +++I+G E+ +L D
Sbjct: 181 IARAVDNGADSIILGCTEICLILDPD 206
>gi|423411450|ref|ZP_17388570.1| aspartate racemase [Bacillus cereus BAG3O-2]
gi|423432764|ref|ZP_17409768.1| aspartate racemase [Bacillus cereus BAG4O-1]
gi|401107505|gb|EJQ15452.1| aspartate racemase [Bacillus cereus BAG3O-2]
gi|401114220|gb|EJQ22082.1| aspartate racemase [Bacillus cereus BAG4O-1]
Length = 224
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 109/255 (42%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQRSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHVI 256
K + E + R+ +LAT+AT+ AG YQ+ + + E + +K TM + I
Sbjct: 106 ETLKAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQI 156
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I I++ ++E A L + + L V+ II ++ V +D +C
Sbjct: 157 ITYIKS---GEVEEAHKLWN-ALVVQLKDEVDTAIIACTDLNVVASEDFVGSSQC----- 207
Query: 317 ALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 208 -LAKAVVRMYLSNIK 221
>gi|228939356|ref|ZP_04101947.1| hypothetical protein bthur0008_20160 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228972234|ref|ZP_04132848.1| hypothetical protein bthur0003_20100 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228978849|ref|ZP_04139217.1| hypothetical protein bthur0002_20510 [Bacillus thuringiensis Bt407]
gi|384186219|ref|YP_005572115.1| aspartate racemase [Bacillus thuringiensis serovar chinensis CT-43]
gi|410674513|ref|YP_006926884.1| aspartate racemase [Bacillus thuringiensis Bt407]
gi|452198554|ref|YP_007478635.1| Aspartate racemase [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
gi|228780871|gb|EEM29081.1| hypothetical protein bthur0002_20510 [Bacillus thuringiensis Bt407]
gi|228787484|gb|EEM35449.1| hypothetical protein bthur0003_20100 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228820316|gb|EEM66350.1| hypothetical protein bthur0008_20160 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326939928|gb|AEA15824.1| aspartate racemase [Bacillus thuringiensis serovar chinensis CT-43]
gi|409173642|gb|AFV17947.1| aspartate racemase [Bacillus thuringiensis Bt407]
gi|452103947|gb|AGG00887.1| Aspartate racemase [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
Length = 230
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 108/234 (46%), Gaps = 38/234 (16%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL--FHAS---VHSLK 138
TIG+IGG+S ST + + + N+ + E L H++ ++S+
Sbjct: 3 TIGLIGGMSWESTSEY-----------------YRIINEE-IKERLGGLHSAKCLINSVD 44
Query: 139 SKTVQLDHIRG---AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ ++ RG + L + L++ GA I++ + H G + E IP LH+
Sbjct: 45 FEEIERFQSRGDWNGAGEVLANAAYSLQKGGADFIIICTNTMHKVVGKIKEKIDIPVLHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ AKE+K ++ ++G+L T T+ FY+ +++ +V++P + + +
Sbjct: 105 ADATAKEIKRKDIQ--------KVGLLGTKYTMEQDFYKSRIEEHDIKVIVPSEKNRKEI 156
Query: 256 --IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPL 307
+I T E + + +R + I+ L+ + +I+G E+ G+L K + +
Sbjct: 157 NKVIYT-ELCLGKIVSQSREYYKRVIEELVQKGAQGIILGCTEI-GLLIKQENV 208
>gi|365158458|ref|ZP_09354652.1| aspartate racemase [Bacillus sp. 7_6_55CFAA_CT2]
gi|363626732|gb|EHL77704.1| aspartate racemase [Bacillus sp. 7_6_55CFAA_CT2]
Length = 224
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P +
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAGCQTIYGAKHDMDFPHMMIYSCPTPFYMDR--------- 52
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
+DH A+ + + LE GA I MPC+ +H + ++ SIP L++ +
Sbjct: 53 -----PIDH--EAMKKAIIEGAQKLESTGASFIAMPCNTAHLYFEELQRSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHVI 256
K + E + R+ +LAT+AT+ AG YQ+ + + E + +K TM + I
Sbjct: 106 ETLKAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQI 156
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I I++ ++E A L + + L V+ II ++ V +D +C
Sbjct: 157 ITYIKS---GEVEEAHKLWN-ALVVQLKDEVDTAIIACTDLNVVASEDFVGSSQC----- 207
Query: 317 ALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 208 -LAKAVVRMYLSNIK 221
>gi|165976728|ref|YP_001652321.1| RacX protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|190150628|ref|YP_001969153.1| aspartate racemase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|303250610|ref|ZP_07336807.1| RacX protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|303252061|ref|ZP_07338230.1| RacX protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307248334|ref|ZP_07530358.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|165876829|gb|ABY69877.1| RacX protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|189915759|gb|ACE62011.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|302649043|gb|EFL79230.1| RacX protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|302650598|gb|EFL80757.1| RacX protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306855155|gb|EFM87334.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
Length = 229
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 155 LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAG 214
L + LEQAGA I++ + H + E S+PFLH+ + VA +K L
Sbjct: 64 LVQQAKLLEQAGAEGILLATNTMHKVASPIVEAISVPFLHILDAVADSIKAKGL------ 117
Query: 215 SGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ +L T T+S FY + L+ +G ++PD+ T + +
Sbjct: 118 --TTVALLGTAFTMSGNFYVDGLRQRGITPLVPDEQTQQEI 156
>gi|398851924|ref|ZP_10608598.1| aspartate racemase [Pseudomonas sp. GM80]
gi|398245633|gb|EJN31148.1| aspartate racemase [Pseudomonas sp. GM80]
Length = 230
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 10/166 (6%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L+ GA C+V+ + H + +IPFLH+ E A+ + + + +G+
Sbjct: 71 LQAGGAECVVLCTNTMHKVAEQIQAAIAIPFLHIAEPAAQAALDIEART--------VGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDM-EGARNLLRIGIQ 280
L T T+ F +++L +G V++PD A V E L + E +R R I+
Sbjct: 123 LGTAFTMEQDFLKQRLIARGLTVLIPDDAERRDVHRIIYEELCVGVISETSRQTYRQVIE 182
Query: 281 LLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWA 326
L R A+I+G E+ G+L K + +D + A+S V +A
Sbjct: 183 SLTARGAQAIILGCTEI-GLLIKPEHSAVPLLDTTELHAQSAVAFA 227
>gi|194014592|ref|ZP_03053209.1| aspartate racemase [Bacillus pumilus ATCC 7061]
gi|194013618|gb|EDW23183.1| aspartate racemase [Bacillus pumilus ATCC 7061]
Length = 235
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 113/266 (42%), Gaps = 48/266 (18%)
Query: 82 ANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
+ TIGI+GG+ +T++ + K++ ++ PA+ ++ +H +
Sbjct: 2 STTIGIMGGMGPLATIDLMKKIISHT---------------PAIKDQ---DHIHVIADNY 43
Query: 142 VQLDHIRGAV-------SQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH 194
Q+ A+ + ++ LE+AGA I++ C+ +H + +V IP ++
Sbjct: 44 PQIPDRTNAIFGKGEDPTDDMIASAKRLERAGADFILIACNTAHFFLENVRHSTHIPIMN 103
Query: 195 VGECVAKELKEAKLKPLEAGSGVR------IGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
+ PLE + + +G+L TD TL YQ + +V+ P
Sbjct: 104 M--------------PLETANYLNKHHYTSVGLLCTDGTLKTQLYQRACAHHKIDVMTPS 149
Query: 249 KATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
+ ++ ++ I A+ + + L + ++L+ + A+I G E+ VL +
Sbjct: 150 E-NLQKNVMNGIYAVKAGKLSEGESELALAAEILINQGAEAIIAGCTEIPLVLRSTKEV- 207
Query: 309 KKCIDPMDALARSTVTWARSNKKLTL 334
K IDP LA+ V +KL +
Sbjct: 208 -KVIDPTVILAKEAVKLVYELEKLNI 232
>gi|149377025|ref|ZP_01894776.1| Aspartate racemase [Marinobacter algicola DG893]
gi|149358683|gb|EDM47154.1| Aspartate racemase [Marinobacter algicola DG893]
Length = 231
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L+ AGA +++ + H ++ IP LH+ + A L E + R+G+
Sbjct: 71 LQNAGADFLMIGTNTMHKVAPEIELAVRIPLLHIADATANVLTEDGI--------TRVGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGA-RNLLRIGIQ 280
L T T+ FY+E+L+ G EVV PD A V E L ++ A R I
Sbjct: 123 LGTRFTMEQAFYRERLEAAGIEVVTPDAAQRAEVHRVIYEELCQGKIQAASREAYLAVID 182
Query: 281 LLLVRAVNAVIIGSDEMQGVLPKDD 305
L + AVI+G E+ ++ + D
Sbjct: 183 SLAEQGAQAVILGCTEIGLLIKQTD 207
>gi|423548048|ref|ZP_17524406.1| aspartate racemase [Bacillus cereus HuB5-5]
gi|401176715|gb|EJQ83909.1| aspartate racemase [Bacillus cereus HuB5-5]
Length = 224
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDIDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA L+ AG I MPC+ +H + ++ SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LKSAGVDFIAMPCNTAHLYFEELQHSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K + +I
Sbjct: 106 ETLRAIPE---------TVKRVALLATEATVQAGIYQDGIAKRNIEYLHNEK--WQEMIS 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L ++ II ++ V +D +D
Sbjct: 155 QIITCIKSGEVEEARKLWS-ALVLQLKNEIDTAIIACTDLNVVASED------FVDSAQC 207
Query: 318 LARSTVTWARSNKK 331
LA + V SN K
Sbjct: 208 LAEAVVRMYLSNTK 221
>gi|398997388|ref|ZP_10700214.1| aspartate racemase [Pseudomonas sp. GM21]
gi|398124160|gb|EJM13681.1| aspartate racemase [Pseudomonas sp. GM21]
Length = 230
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 114/255 (44%), Gaps = 34/255 (13%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKD------AEECPPFVVCNDPALNEELFHASVHS 136
TIG+IGG+S S+ + +L+ +D + + F V P E+ HA H
Sbjct: 2 RTIGLIGGMSWESSAEYY-RLINQQVRDRLGPLRSAQLLMFSVDFGPV--EQAQHAG-HW 57
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
+ + +D R LE GA C+V+ + H G + +IPFLH+
Sbjct: 58 DDAAAILVDAAR------------RLEAGGAECVVLCTNTMHKVAGQIQAAITIPFLHIA 105
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME--H 254
+ + ++AG+ +++G+L T T+ F +++L G V++P+ + H
Sbjct: 106 DPTGQ-------AAVDAGA-LKVGLLGTAFTMEQDFLKDRLSAMGLTVLVPEAEERQAVH 157
Query: 255 VIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDP 314
II E E +R + + I+ L R A+I+G E+ G+L K + +D
Sbjct: 158 RIIYD-ELCVGVISEASRKVYQQVIESLSRRGAQAIILGCTEI-GLLIKPEHSALPLLDT 215
Query: 315 MDALARSTVTWARSN 329
+ A++ V +A +
Sbjct: 216 TELHAQAAVAFALGD 230
>gi|229155808|ref|ZP_04283911.1| hypothetical protein bcere0010_20000 [Bacillus cereus ATCC 4342]
gi|228627652|gb|EEK84376.1| hypothetical protein bcere0010_20000 [Bacillus cereus ATCC 4342]
Length = 237
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 107/255 (41%), Gaps = 34/255 (13%)
Query: 90 GVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKS--KTVQLD 145
GV + T+ +G + W S + +NEE+ +HS K +V +
Sbjct: 2 GVGLMKTIGLIGGMSWESTAEYYRI----------INEEIKSRLGGLHSAKCLINSVDFE 51
Query: 146 HIRG--------AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
I G + + L + L+ GA I++ + H + E IP LH+ +
Sbjct: 52 EIEGFQSSGDWDSAGEILGNAAYSLQMGGADFIIICTNTMHKVIEKIKENIHIPVLHIAD 111
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV-- 255
AKE+K ++ +G+L T T+ FY+ +++ +V++P + E +
Sbjct: 112 ATAKEMKRKGIQT--------VGLLGTKYTMEQDFYKSRIKENDIKVIVPLEKNREKINE 163
Query: 256 IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPM 315
+I T E + + +R + I+ L+ + +I+G E+ G+L K + + D
Sbjct: 164 VIYT-ELCLGKIVSQSREYYKTVIEDLVQKGAQGIILGCTEI-GLLIKQEDVSIPIFDTT 221
Query: 316 DALARSTVTWARSNK 330
A V +A N+
Sbjct: 222 YIHAVEAVNFAVGNR 236
>gi|229172921|ref|ZP_04300474.1| hypothetical protein bcere0006_20280 [Bacillus cereus MM3]
gi|228610544|gb|EEK67813.1| hypothetical protein bcere0006_20280 [Bacillus cereus MM3]
Length = 237
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 99/228 (43%), Gaps = 29/228 (12%)
Query: 90 GVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS--KTVQLDHI 147
GVSV T+ +G + W S + + + N+ + E L +HS K +V + I
Sbjct: 2 GVSVMKTIGLIGGMSWESTSEY-----YRIINEE-IKERL--GGLHSAKCMINSVDFEEI 53
Query: 148 R--------GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+ L + L++ GA I++ + H + E IP LH+ +
Sbjct: 54 ERFQSNGDWNGAGEVLGNAAYSLQRGGADFIIICTNTMHKVVEKIKENIHIPILHIADAT 113
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV--II 257
AKE+K ++ +G+L T T+ FY+ +++ +V++P + E + +I
Sbjct: 114 AKEIKRKDIQT--------VGLLGTKYTMEQDFYKSRIEENDIKVIVPSEKNREKINEVI 165
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
T E + +R + I+ L+ +I+G E+ ++ ++D
Sbjct: 166 YT-ELCLGKITSQSREYYKRVIEELVQEGAQGIILGCTEIGLLIKQED 212
>gi|365131420|ref|ZP_09341832.1| aspartate racemase [Subdoligranulum sp. 4_3_54A2FAA]
gi|363618789|gb|EHL70130.1| aspartate racemase [Subdoligranulum sp. 4_3_54A2FAA]
Length = 238
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 40/249 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
+GI+GG+ +T+ F L ++ A +++ ++S + +
Sbjct: 9 LGILGGLGPMATVYFYEMLTRHT--------------QAARDQDHIDVIINSRATTPDRT 54
Query: 145 DHIRGAVSQN----LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
+I G ++N + A L GA I +PC+ +H ++ ++E IP L+
Sbjct: 55 SYILGQSAENPFDIMAADAARLVTFGADVIAIPCNTAHYFYDRLNETIPIPILN------ 108
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI---- 256
+ E + +AG R+G+LAT T+ YQ + G +PD A V+
Sbjct: 109 --MVEETVLAAKAGGSARVGILATTGTVRTRTYQRMCEKHGLPCAVPDDAAQAAVMDVIY 166
Query: 257 --IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDP 314
I N E A LR + + I+G E+ ++ +D+ L +D
Sbjct: 167 GDIKQGRPANMDAFERAAASLR-------SQGCDRAILGCTELS-LIKRDEGLGAFYLDS 218
Query: 315 MDALARSTV 323
M+ LAR+ +
Sbjct: 219 MEVLARNAI 227
>gi|224826368|ref|ZP_03699470.1| aspartate racemase [Pseudogulbenkiania ferrooxidans 2002]
gi|224601469|gb|EEG07650.1| aspartate racemase [Pseudogulbenkiania ferrooxidans 2002]
Length = 476
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 111/271 (40%), Gaps = 53/271 (19%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPA-LNEELFHASVH-- 135
L Q +GI+GGV ++T++F+ K VVCN PA ++E V
Sbjct: 235 LEQPFKLGIVGGVGPAATVDFMDK---------------VVCNTPAGCDQEHIKMVVEQN 279
Query: 136 -SLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH 194
+ +T L H + L LE GA+ I +PC+ +HA+ + + P ++
Sbjct: 280 PQIPDRTANLLHEGTDPTVALLATCQRLEADGAKAIAIPCNTAHAFVAAIQPYLTTPIVN 339
Query: 195 V-GECVAK-ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
+ E +A + + KP +G+LAT T+ + Y + G ++ P+
Sbjct: 340 MLTETIAHIRTRYSGDKP--------VGLLATAGTVQSRVYHAAAEQAGIRLIAPEPPFQ 391
Query: 253 EHVIIPTI----------EALNHRD-MEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL 301
+ V+ E + D + A +L + G ++L I+G E+ +
Sbjct: 392 DKVMNAIYGECGVKAGFTEGESKTDLLAAAEHLAQAGAEIL--------ILGCTELPLLF 443
Query: 302 PKD-----DPLLKKCIDPMDALARSTVTWAR 327
P+ D IDP D LAR V AR
Sbjct: 444 PQSHEIELDGRTVALIDPTDILARRCVQLAR 474
>gi|402488484|ref|ZP_10835295.1| aspartate racemase [Rhizobium sp. CCGE 510]
gi|401812546|gb|EJT04897.1| aspartate racemase [Rhizobium sp. CCGE 510]
Length = 239
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 25/226 (11%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPAL-NEELFHASVHSLKSKT 141
TIG+IGG+S S+ V+Y + V L + EL SV+ + T
Sbjct: 2 ETIGLIGGMSFESSA------VYYRLVN-----EMVRARKGGLASAELILHSVNFEEIVT 50
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+Q ++ L A LE AGA C+++ + H V+ S+P +H+ + AK
Sbjct: 51 LQKAGDWEGAARRLGEVAARLEAAGAGCVLICTNTMHLIAEQVAAKISVPLIHIIDETAK 110
Query: 202 ELKEA-KLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA--TMEHVIIP 258
L A + +PL +LAT T+ GFY +++++ G ++++PD A T H II
Sbjct: 111 SLHAAGRKRPL---------LLATRYTMEHGFYGDRMKSLGLDILVPDAADRTTVHDIIF 161
Query: 259 TIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD 304
E R + +R L I + +++I+G E+ +L D
Sbjct: 162 N-ELCAGRVHDSSREKLIDIIDRAIEHGADSIILGCTEICLILDPD 206
>gi|423397136|ref|ZP_17374337.1| aspartate racemase [Bacillus cereus BAG2X1-1]
gi|423407974|ref|ZP_17385123.1| aspartate racemase [Bacillus cereus BAG2X1-3]
gi|401650663|gb|EJS68233.1| aspartate racemase [Bacillus cereus BAG2X1-1]
gi|401658412|gb|EJS75908.1| aspartate racemase [Bacillus cereus BAG2X1-3]
Length = 232
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 105/244 (43%), Gaps = 61/244 (25%)
Query: 84 TIGIIGGVSVSSTLNF-----------LGKLVWYSAK------DAEECPPFVVCNDPALN 126
TIG+IGG+S ST + LG L +SAK D EE + D
Sbjct: 3 TIGLIGGMSWESTSEYYRILNEEIKSRLGGL--HSAKCLINSVDFEEIERYQSSGDWDGA 60
Query: 127 EELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSE 186
EL + +SL +++GA I++ + H + E
Sbjct: 61 GELLGNAAYSL-------------------------QKSGADFIIICTNTMHKVVEKIKE 95
Query: 187 GCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVL 246
+IP LH+ + AKE+K ++ R+G+L T T+ FY+ +++ +V++
Sbjct: 96 NINIPVLHIADATAKEIKRKGIQ--------RVGLLGTKYTMEQDFYKSRIEENDIKVMV 147
Query: 247 P---DKATMEHVIIPT--IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL 301
P D+ + VI + +N + E +++ I+ L+ + V +I+G E+ ++
Sbjct: 148 PLVKDREKINEVIYTELCLGKINSQSREYYKSV----IEELVQQGVQGIILGCTEIGLLI 203
Query: 302 PKDD 305
++D
Sbjct: 204 KQED 207
>gi|317053843|ref|YP_004117868.1| aspartate racemase [Pantoea sp. At-9b]
gi|316951838|gb|ADU71312.1| aspartate racemase [Pantoea sp. At-9b]
Length = 230
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 20/152 (13%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ GA IV+ + H ++ +IP LH+ + A +++A +K R+G+
Sbjct: 71 LERGGADFIVLCTNTMHKLAAQITAAVNIPLLHIADATAARIRQAGVK--------RVGL 122
Query: 222 LATDATLSAGFYQEKLQNQ-GFEVVLPDKATMEHVIIPTIEALNHRDM------EGARNL 274
LAT T+ FY+ +LQ + G EV++P AT V+ I ++++ E +R
Sbjct: 123 LATGFTMEQDFYKGRLQQEYGIEVLVP-AATQRKVVHDII----YQELCLGIIREESRAH 177
Query: 275 LRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDP 306
R I L+ A+I+G E+ ++ +D
Sbjct: 178 YREIIAQLVAEGAEAIILGCTEITLLVKPEDA 209
>gi|229013961|ref|ZP_04171086.1| amino-acid racemase [Bacillus mycoides DSM 2048]
gi|423660394|ref|ZP_17635563.1| aspartate racemase [Bacillus cereus VDM022]
gi|228747334|gb|EEL97212.1| amino-acid racemase [Bacillus mycoides DSM 2048]
gi|401303064|gb|EJS08631.1| aspartate racemase [Bacillus cereus VDM022]
Length = 224
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPA---LNEELFHASVHS 136
IGI+ G+ ST F+ +V Y AK + P ++ + P ++ + HA++
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHAAM-- 59
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
K + I GA LE G I MPC+ +H + ++ +IP L++
Sbjct: 60 --KKAI----IEGAQK---------LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIV 104
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
+ K + E + R+ +LAT+AT+ A YQ+ + + E + ++ + +I
Sbjct: 105 DETLKAIPE---------NTKRVALLATEATVQASIYQDGITKRDIEYIHNEQ--WQEMI 153
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I + ++E AR L + + L L V+ II ++ V+ +D +D
Sbjct: 154 NQIITCIKGGEIEEARKLWSLLV-LQLKDEVDTAIIACTDLNVVVSED------FVDSAQ 206
Query: 317 ALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 207 CLAKAVVRIYASNIK 221
>gi|228952564|ref|ZP_04114640.1| hypothetical protein bthur0006_19620 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|423424273|ref|ZP_17401304.1| aspartate racemase [Bacillus cereus BAG3X2-2]
gi|423505783|ref|ZP_17482373.1| aspartate racemase [Bacillus cereus HD73]
gi|449089121|ref|YP_007421562.1| hypothetical protein HD73_2463 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228807030|gb|EEM53573.1| hypothetical protein bthur0006_19620 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|401114093|gb|EJQ21956.1| aspartate racemase [Bacillus cereus BAG3X2-2]
gi|402450514|gb|EJV82347.1| aspartate racemase [Bacillus cereus HD73]
gi|449022878|gb|AGE78041.1| hypothetical protein HD73_2463 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 231
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 102/238 (42%), Gaps = 46/238 (19%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKS-- 139
TIG+IGG+S ST + +NEE+ +HS K
Sbjct: 3 TIGLIGGMSWESTSEYY----------------------RIINEEIKERLGGLHSAKCLI 40
Query: 140 KTVQLDHIR--------GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
+V + I + L + L++ GA I++ + H G + IP
Sbjct: 41 NSVDFEEIERCQSSGDWDGAGEILGNAAYSLQKGGADFIIICTNTMHKVVGKIKAKIDIP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ + AKE+K ++ ++G+L T T+ FY+ +++ +V++P +
Sbjct: 101 VLHIADATAKEIKRKDIQ--------KVGLLGTKYTMEQDFYKSRIEENNIKVIVPSEKN 152
Query: 252 MEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPL 307
+ + +I T E + + +R + GI+ L+ + +I+G E+ G+L K + +
Sbjct: 153 RKEINKVIYT-ELCLGKIVSQSREYYKRGIEELVQKGAQGIILGCTEI-GLLIKQENV 208
>gi|187921369|ref|YP_001890401.1| aspartate racemase [Burkholderia phytofirmans PsJN]
gi|187719807|gb|ACD21030.1| aspartate racemase [Burkholderia phytofirmans PsJN]
Length = 497
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 28/180 (15%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVR-IG 220
LE A I +PC+ +HA+ + SIP +++ + L+E +R +G
Sbjct: 314 LESGDADLIAIPCNTAHAFVERIQPYLSIPIVNMLTVTVRHLRETY-------PALRSVG 366
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIG-- 278
VLAT T+++G Y++ L+++G +P +A ++ ++ I +G + G
Sbjct: 367 VLATSGTIASGVYEKALESEGLRQTVP-RAELQARVMEAIYG-----NKGVKAGFTTGQC 420
Query: 279 -------IQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK-----KCIDPMDALARSTVTWA 326
I L+ V +I+G E+ +LPK + +DP D LAR V A
Sbjct: 421 LDDISAAIDGLVAEGVEVIILGCTELPLLLPKQSFVGTTGARVSLVDPTDVLARQCVILA 480
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 23/165 (13%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
G++GG+ ++ + KLV + + DAE D + F +V ++ T
Sbjct: 12 FGVVGGLGPLASADVFFKLVKSTPASSDAEHV-------DVIFEQHPFRGAVAGGEATTQ 64
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
+ +I +S E+ G +V+PC +SH + ++ + + + E V
Sbjct: 65 RKLYIFDMISG--------FEKRGVTTVVLPCFLSHTFIDELKANSPLQIVDMVEAVRSH 116
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
++ + + RIGVL +D T G +++ FEV+ P
Sbjct: 117 VRR------KFPTARRIGVLTSDFTRRKGLFEKYFATPEFEVIHP 155
>gi|90961008|ref|YP_534924.1| aspartate racemase [Lactobacillus salivarius UCC118]
gi|301299506|ref|ZP_07205779.1| aspartate racemase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|90820202|gb|ABD98841.1| Aspartate racemase [Lactobacillus salivarius UCC118]
gi|300852896|gb|EFK80507.1| aspartate racemase [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 237
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKL-VWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
N IIGG+ +T +++ +L + A + +E +++ N HA+V +
Sbjct: 3 NFFTIIGGMGTMATESYIHQLNLRTPANNDQEYLNYILVN---------HATVPDRTAYI 53
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGAR--CIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
LD+ + L F +QA + +PC+ +H ++ ++ +P LH+
Sbjct: 54 --LDNSKPNPKIPLLED--FKQQASLKPDFFTLPCNTAHYFYDELQAAVDVPVLHMPRLA 109
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+++K+ + + R+G++AT+ TL G Y +++ + G+E+V P +
Sbjct: 110 VEQIKQ------DYPNAKRVGIVATNGTLHDGVYDKEILDAGYELVKPTAEIQAKTMELI 163
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
+ + +D + + ++ +AVI+G E+
Sbjct: 164 YDDIKEKDYVDGKLFYELVEDMVKDEKCDAVILGCTEL 201
>gi|313897176|ref|ZP_07830720.1| aspartate racemase [Clostridium sp. HGF2]
gi|373122783|ref|ZP_09536643.1| aspartate racemase [Erysipelotrichaceae bacterium 21_3]
gi|422327008|ref|ZP_16408036.1| aspartate racemase [Erysipelotrichaceae bacterium 6_1_45]
gi|312957897|gb|EFR39521.1| aspartate racemase [Clostridium sp. HGF2]
gi|371662735|gb|EHO27933.1| aspartate racemase [Erysipelotrichaceae bacterium 21_3]
gi|371664498|gb|EHO29671.1| aspartate racemase [Erysipelotrichaceae bacterium 6_1_45]
Length = 236
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 103/236 (43%), Gaps = 43/236 (18%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS--K 140
TIG+IGG+S ST+ P + + N+ + +L +HS K
Sbjct: 2 KTIGLIGGMSWESTI-----------------PYYQIINE-GVKAQL--GGLHSAKIILH 41
Query: 141 TVQLDHIRGAVSQN--------LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+V+ D I S+ L LE AGA I++ + H ++ IP
Sbjct: 42 SVEFDEIEKCQSRGDWKKSGEILGKAAQGLEAAGADFILICTNTMHKVAPQIASMIHIPI 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
+H+ + A+EL + ++G+L T T++ FY++KL +G EV++P+ +
Sbjct: 102 IHIADATAEELLNHNIH--------KVGLLGTKYTMTQDFYKQKLVERGIEVIVPEATEI 153
Query: 253 E---HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
E H+I E + E +R + I+ + R VI+G E+ ++ + D
Sbjct: 154 EVINHIIFH--ELCVGQIKEDSRKKFQSIIERMKSRGAEGVILGCTEIGLLIHQSD 207
>gi|229115704|ref|ZP_04245109.1| hypothetical protein bcere0017_19970 [Bacillus cereus Rock1-3]
gi|407704637|ref|YP_006828222.1| cytoplasmic protein [Bacillus thuringiensis MC28]
gi|423379967|ref|ZP_17357251.1| aspartate racemase [Bacillus cereus BAG1O-2]
gi|228667846|gb|EEL23283.1| hypothetical protein bcere0017_19970 [Bacillus cereus Rock1-3]
gi|401631838|gb|EJS49629.1| aspartate racemase [Bacillus cereus BAG1O-2]
gi|407382322|gb|AFU12823.1| Aspartate racemase [Bacillus thuringiensis MC28]
Length = 232
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 107/261 (40%), Gaps = 46/261 (17%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKS-- 139
TIG+IGG+S ST + LNEE+ +HS K
Sbjct: 3 TIGLIGGMSWESTSEYY----------------------RILNEEIKSKLGGLHSAKCLI 40
Query: 140 KTVQLDHIR--------GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
+V + I + L + L++ GA I++ + H + E +IP
Sbjct: 41 NSVDFEEIERFQSNGDWDGAGEVLGNAAYSLQKGGADFIIICTNTMHKVVEKIKENINIP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ + AKE+K ++ IG+L T T+ FY+ +++ +V++P +
Sbjct: 101 VLHIADTTAKEIKRKGIQT--------IGLLGTKYTMEQDFYKSRIEENNIKVIVPVEKN 152
Query: 252 MEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK 309
E + II T E + +R + I+ L+ + +I+G E+ G+L K + +L
Sbjct: 153 REKLNEIIYT-ELCLGKITSQSREYYKRVIEELVQKGAQGIILGCTEI-GLLIKQEDVLV 210
Query: 310 KCIDPMDALARSTVTWARSNK 330
D A V A N+
Sbjct: 211 PIFDTTFIHAMEAVNVALENR 231
>gi|440228622|ref|YP_007335706.1| aspartate/glutamate racemase family protein [Rhizobium tropici CIAT
899]
gi|440040330|gb|AGB73160.1| aspartate/glutamate racemase family protein [Rhizobium tropici CIAT
899]
Length = 229
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 29/228 (12%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE-ELFHASVHSLKSKTV 142
TIGI+GG+S +ST + +L + + N L+ EL SV + + +
Sbjct: 3 TIGILGGMSAASTQIYYRELCRLTRE-----------NLGGLHSPELLIRSVDFDEIEKL 51
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
Q + L K LE+ GA ++M + H + +G SIPF+H+ + A
Sbjct: 52 QASSDWNVAANILNEKAIALERGGADLLIMATNTMHKVADTILDGVSIPFIHIADATATA 111
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPT 259
+ + + R G++AT T+ FY +L G +P D+A +I
Sbjct: 112 ILNSGFR--------RPGLMATAFTMEQNFYTARLSALGLLPTIPEAGDRAETHRIIYDE 163
Query: 260 IEALNHRDM--EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
+ RD+ E +R + + L+ R + +I+G E+ +L +D+
Sbjct: 164 L----CRDVVREESRLTYELIARRLIDRGCDCLILGCTEVGMLLNQDN 207
>gi|389848598|ref|YP_006350835.1| aspartate racemase [Haloferax mediterranei ATCC 33500]
gi|448614612|ref|ZP_21663759.1| aspartate racemase [Haloferax mediterranei ATCC 33500]
gi|388245904|gb|AFK20848.1| aspartate racemase [Haloferax mediterranei ATCC 33500]
gi|445753946|gb|EMA05361.1| aspartate racemase [Haloferax mediterranei ATCC 33500]
Length = 251
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 103/235 (43%), Gaps = 35/235 (14%)
Query: 80 NQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
++ TIGI+GG+S ST+ + +L+ D +N+ +
Sbjct: 7 DEPRTIGILGGMSSQSTVEYY-RLI-----------------DDTINDIHGGHYTGDIVI 48
Query: 140 KTVQLDHIRGAV-SQNLRHKRAFLEQA-------GARCIVMPCHISHAWHGDVSEGCSIP 191
++V I G + ++ A+L +A GA +++ + H + + S+P
Sbjct: 49 RSVNFADIEGFIQAERWDEAGAYLAEAAHDLEAGGADFVLLATNTMHKVAPSIVDALSVP 108
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
+H+ + A ++ A + +GVL T AT+ FY+++ + G ++V+PD+
Sbjct: 109 LVHIVDVAADAIRAAGIDT--------VGVLGTQATMQGDFYRDRFADHGIDIVVPDRQH 160
Query: 252 MEHVIIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
V E L ++ + +R+ I L+ + +++G E++ ++ + D
Sbjct: 161 RPEVDRIIFEELTKGEIRDESRDYYLEVIDNLVAQGAEGIVLGCTEIELLVDQSD 215
>gi|295681452|ref|YP_003610026.1| aspartate racemase [Burkholderia sp. CCGE1002]
gi|295441347|gb|ADG20515.1| aspartate racemase [Burkholderia sp. CCGE1002]
Length = 488
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 47/238 (19%)
Query: 123 PALNEELFHASVHSLKSKTVQLDHIRGAVSQN--------------------LRHKRAFL 162
PA + H V + ++ Q DHI+ V QN L L
Sbjct: 259 PAATVDFIHKIVRATPAQRDQ-DHIKLLVEQNPQIPDRTENLIGDGPDPTISLYATCKKL 317
Query: 163 EQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVL 222
E GA I +PC+ +HA+ + +P +++ + L+E+ L + +GVL
Sbjct: 318 ETGGADLIAIPCNTAHAFVERIQPYLGVPIVNMLTVTVRYLRES-FPALRS-----VGVL 371
Query: 223 ATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGA-------RNLL 275
AT TL++G YQ+ L++QG V+P A V ++A+ + A + L
Sbjct: 372 ATSGTLASGVYQKALESQGLRQVVPAPALQARV----MDAIYGKAGVKAGFTAGQCQQDL 427
Query: 276 RIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL-------KKCIDPMDALARSTVTWA 326
I L+ V +++G E+ +L +P + +DP D LA+ V A
Sbjct: 428 AAAIDGLIAEGVEVIVLGCTELPLLL--REPYVIGANGARVSIVDPTDVLAKQCVACA 483
>gi|418936429|ref|ZP_13490147.1| aspartate racemase [Rhizobium sp. PDO1-076]
gi|375056857|gb|EHS53063.1| aspartate racemase [Rhizobium sp. PDO1-076]
Length = 237
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLK-PLEAGSGVRIG 220
LE+AGA C+++ + H G+V ++P +++ + A LK+ K PL
Sbjct: 71 LEKAGASCVLICTNTMHLVAGEVQARINVPLINIIDETATALKKNGAKRPL--------- 121
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKA--TMEHVIIPTIEALNHRDMEGARNLLRIG 278
+LAT T+ GFY E+++ G E+++PD T H II E R ++ +R L
Sbjct: 122 LLATRYTMEHGFYAERMRRNGVEIMVPDAGGRTATHNIIFD-ELCAGRVIDSSREKLMAI 180
Query: 279 IQLLLVRAVNAVIIGSDEMQGVL-PKDDPL 307
I+ ++VI+G E+ +L P PL
Sbjct: 181 IEQAKAEGADSVILGCTEICLILDPTALPL 210
>gi|196041448|ref|ZP_03108741.1| probable amino-acid racemase [Bacillus cereus NVH0597-99]
gi|196027696|gb|EDX66310.1| probable amino-acid racemase [Bacillus cereus NVH0597-99]
Length = 224
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 105/252 (41%), Gaps = 41/252 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ + SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQQSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
K + E + R+ +LAT+AT+ +G YQ+ + + E + ++ + I
Sbjct: 106 ETLKAIPE---------TAKRVALLATEATVQSGIYQDGIAKRNIEYIHYEQ--WQESIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L V+ II ++ V +D +D
Sbjct: 155 QIISYIKGGEIEKARKLWN-ALVLQLRDEVDTAIIACTDLNVVASED------FVDSSQC 207
Query: 318 LARSTVTWARSN 329
LA++ V N
Sbjct: 208 LAKAVVRMYVEN 219
>gi|118479884|ref|YP_897035.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam]
gi|376268690|ref|YP_005121402.1| Amino acid racemase RacX [Bacillus cereus F837/76]
gi|118419109|gb|ABK87528.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam]
gi|364514490|gb|AEW57889.1| Amino acid racemase RacX [Bacillus cereus F837/76]
Length = 224
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 37/250 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
IGI+ G+ ST F+ +V Y AK + P ++ + P F+ H +
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDIDFPHMMIYSCPTP----FYMD-HPIDH 56
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+ ++ I GA LE GA I MPC+ +H + ++ + SIP L++ +
Sbjct: 57 EAMKKAIIEGAQK---------LESTGASFIAMPCNTAHLYFKELQQSISIPILNIVDET 107
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K + I
Sbjct: 108 LQVIPE---------NTKRVALLATEATVQAGIYQDGIAKRNIEYIHHEK--WQESINQI 156
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALA 319
I + ++E AR L + L L V+ II ++ V ++ +D LA
Sbjct: 157 ISCIKGGEIEKARELWN-ALVLQLKDEVDTAIIACTDLNVVASEN------FVDSSQCLA 209
Query: 320 RSTVTWARSN 329
++ V N
Sbjct: 210 KAVVRMYVEN 219
>gi|417793243|ref|ZP_12440524.1| aspartate racemase [Streptococcus oralis SK255]
gi|334273713|gb|EGL92054.1| aspartate racemase [Streptococcus oralis SK255]
Length = 230
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 107/255 (41%), Gaps = 40/255 (15%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLK---- 138
TIG+IGG+S ST ++ + + N + +EL +HS K
Sbjct: 2 KTIGLIGGMSWESTTSY-----------------YQIIN-KTIKKEL--GGLHSAKILLY 41
Query: 139 -SKTVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+++H + Q L LEQAGA IV+ + H + E +IP
Sbjct: 42 SVDFAEIEHYQAVGDWEKSGQLLADVAQRLEQAGADFIVICTNTMHKVAPQIQEKITIPI 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
LH+ + A+ L ++ ++G+L T T++ FY+EKL G EV++PD+A +
Sbjct: 102 LHIAQATAQALLADGIQ--------KVGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGI 153
Query: 253 EHVIIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC 311
V + L D+ E ++ I L AVI+G E+ G+L K +
Sbjct: 154 TEVNRIIYDELCLGDIKESSKQTYLAVIDDLKKAGAEAVILGCTEI-GLLVKQTDIDLPL 212
Query: 312 IDPMDALARSTVTWA 326
D A WA
Sbjct: 213 YDTTVIHAEKAAEWA 227
>gi|394993679|ref|ZP_10386421.1| aspartate racemase [Bacillus sp. 916]
gi|393805473|gb|EJD66850.1| aspartate racemase [Bacillus sp. 916]
Length = 226
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 43/227 (18%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPA---LNEELFHASVHS 136
IGI+ G+ ST F+ K+V Y A + P ++ + P +N+ L H +
Sbjct: 2 IGILAGMGPKSTGPFVDKVVDECQKIYGAIHDMDFPHMMIYSCPTPFYMNKPLNHTDM-- 59
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH-V 195
K + I GAV LE+ G I +PC+ +H + + + S+P L+ V
Sbjct: 60 --EKAI----IEGAVK---------LEKTGVDFIAIPCNTAHIYFNQIKKSISVPLLNMV 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD--KATME 253
E + K K +K + +LAT T+ +G +QE L +G++ + D + ++
Sbjct: 105 DETINKIPKGSK----------KAALLATVPTVQSGIFQEALNREGYDFLHQDSWQIYVD 154
Query: 254 HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGV 300
H+ IE + ++ AR L + L V+ VII ++ V
Sbjct: 155 HI----IEKIKQGQIDEARTLYD-ELHRDLAEKVDTVIIACTDLNMV 196
>gi|418399194|ref|ZP_12972745.1| aspartate racemase [Sinorhizobium meliloti CCNWSX0020]
gi|359506927|gb|EHK79438.1| aspartate racemase [Sinorhizobium meliloti CCNWSX0020]
Length = 229
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGI+GG+S +ST + +L + + + P EL SV + + +Q
Sbjct: 3 TIGILGGMSAASTQIYYRELCRLTRE------SLGGLHSP----ELLIRSVDFDEIEKLQ 52
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
A + L K LE+ GA ++M + H + G SIPF+H+ + A +
Sbjct: 53 ASSEWDAAADILNEKAIALERGGADLLIMATNTMHKVADKILSGVSIPFVHIADATATAI 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
+ + R G++AT T+ FY ++L +G +PD
Sbjct: 113 LDGGFR--------RPGLMATAFTMEQNFYTDRLTARGLSPTVPD 149
>gi|304384561|ref|ZP_07366907.1| aspartate racemase [Pediococcus acidilactici DSM 20284]
gi|304328755|gb|EFL95975.1| aspartate racemase [Pediococcus acidilactici DSM 20284]
Length = 235
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 170 IVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLS 229
V+ C+ +H ++ D+ + P +H+ K++K+ E + RIG++ T T +
Sbjct: 80 FVIACNTAHYFYDDLQKATEFPIVHMPRETVKQIKK------EFPAAKRIGIIGTPGTTT 133
Query: 230 AGFYQEKLQNQGFEVVLPDKATME---HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRA 286
G Y +L +G+EVV P + +I I+A N D + +LR+ + R
Sbjct: 134 DGIYDRELIAEGYEVVKPTPEIQDLTSKLIFEDIKAQNKVDAQLFYQILRLMTE---ERG 190
Query: 287 VNAVIIGSDEM 297
VI+G E+
Sbjct: 191 AQVVILGCTEL 201
>gi|295097389|emb|CBK86479.1| aspartate racemase [Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 230
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 96/234 (41%), Gaps = 40/234 (17%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG++GG+S ST+ P+ + + + L SL +V
Sbjct: 2 KTIGLLGGMSWESTI------------------PYYRLINEGVKQRLGGLHSASLLLHSV 43
Query: 143 QLDHIRGAVS--------QNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH 194
I S Q L LE+AGA+ I++ + H + + CS+PFLH
Sbjct: 44 DFHEIEACQSSGEWDKAGQMLADAALGLERAGAQGILLCTNTMHKVASHIEDRCSLPFLH 103
Query: 195 VGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLP---DKA 250
+ + + ++ A + R+ +L T T+ FY+ +L +Q G E ++P D+A
Sbjct: 104 IADATGRAIRAAGM--------TRVALLGTRYTMEQDFYRGRLNSQFGIESLIPEEADRA 155
Query: 251 TMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD 304
+ +I E E +R I+ L + VI G E+ ++P D
Sbjct: 156 RINQIIFD--ELCLGTFSETSRAWYVSVIEKLAQQGAEGVIFGCTEIGLLVPAD 207
>gi|229096725|ref|ZP_04227696.1| hypothetical protein bcere0020_19720 [Bacillus cereus Rock3-29]
gi|229102827|ref|ZP_04233523.1| hypothetical protein bcere0019_19810 [Bacillus cereus Rock3-28]
gi|423443001|ref|ZP_17419907.1| aspartate racemase [Bacillus cereus BAG4X2-1]
gi|423535417|ref|ZP_17511835.1| aspartate racemase [Bacillus cereus HuB2-9]
gi|228680612|gb|EEL34793.1| hypothetical protein bcere0019_19810 [Bacillus cereus Rock3-28]
gi|228686931|gb|EEL40838.1| hypothetical protein bcere0020_19720 [Bacillus cereus Rock3-29]
gi|402413754|gb|EJV46096.1| aspartate racemase [Bacillus cereus BAG4X2-1]
gi|402462206|gb|EJV93916.1| aspartate racemase [Bacillus cereus HuB2-9]
Length = 232
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 107/261 (40%), Gaps = 46/261 (17%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKS-- 139
TIG+IGG+S ST + LNEE+ +HS K
Sbjct: 3 TIGLIGGMSWESTSEYY----------------------RILNEEIKSRLGGLHSAKCLI 40
Query: 140 KTVQLDHIR--------GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
+V + I + L + L++ GA I++ + H + E +IP
Sbjct: 41 NSVDFEEIERFQSNGDWDGAGEVLGNAAYSLQKGGADFIIICTNTMHKVVEKIKENINIP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ + AKE+K ++ IG+L T T+ FY+ +++ +V++P +
Sbjct: 101 VLHIADTTAKEIKRKGIQT--------IGLLGTKYTMEQDFYKSRIEENNIKVIVPVEKN 152
Query: 252 MEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK 309
E + II T E + +R + I+ L+ + +I+G E+ G+L K + +L
Sbjct: 153 REKLNEIIYT-ELCLGKITSQSREYYKRVIEELVQKGAQGIILGCTEI-GLLIKQEDVLV 210
Query: 310 KCIDPMDALARSTVTWARSNK 330
D A V A N+
Sbjct: 211 PIFDTTFIHAMEAVNVALENR 231
>gi|283955428|ref|ZP_06372926.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
414]
gi|283793055|gb|EFC31826.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
414]
Length = 227
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE-ELFHASVHSLKSKTV 142
TIGIIGG+S ST+ + K++ + D + +LN ++ SV+ + + +
Sbjct: 3 TIGIIGGMSFESTITYY-KIINQAINDKLK----------SLNSAKILLYSVNFEEIEIL 51
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
Q +Q L LE AG I++ + H ++ + +IP LH+ + AK
Sbjct: 52 QKQDKWQEAAQILSECAKKLELAGVDFIIITTNTMHKVFDEIQKSINIPVLHIAKSTAKA 111
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
LK+ ++ ++G+L T T++ FY++ L+ + ++P
Sbjct: 112 LKQENIQ--------KVGLLGTKYTMTQDFYKKILEEENISTIIP 148
>gi|408480812|ref|ZP_11187031.1| aspartate racemase [Pseudomonas sp. R81]
Length = 483
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 112/258 (43%), Gaps = 29/258 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS--AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
+GI+GGV ++T++F+GK+V ++ KD + VV +P + + ++ +
Sbjct: 244 LGIVGGVGPAATVDFMGKVVAHTPAGKDQDHIK-MVVEQNPQIPD----------RTANL 292
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
D ++ KR LE AGA+ I +PC+ +HA+ + +P +++ E
Sbjct: 293 LRDETDPTLALFATCKR--LESAGAQAIAIPCNTAHAFVERIQAHLRVPIVNM----LSE 346
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP--DKATMEHVIIPTI 260
E + G G +G+LAT TL + Y + + G E++ P D + I
Sbjct: 347 TVEWIVHTY--GRGQAVGLLATSGTLQSQVYHQAARRSGLELITPGFDYQALVMEAIYGE 404
Query: 261 EALNHRDMEGA-RNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPL-----LKKCIDP 314
+ +G R L + + L + +I+G E+ VL D +DP
Sbjct: 405 RGIKAGFTQGVCREQLLLAAEHLCEQGAKVLILGCTELPLVLAHCDVFEIGAHRVALVDP 464
Query: 315 MDALARSTVTWARSNKKL 332
LAR V+ + ++
Sbjct: 465 TTVLARRCVSLSSGAYRI 482
>gi|422850513|ref|ZP_16897183.1| aspartate racemase [Streptococcus sanguinis SK150]
gi|325695261|gb|EGD37161.1| aspartate racemase [Streptococcus sanguinis SK150]
Length = 230
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASVHSLKSK 140
TIG+IGG+S ST ++ + + N+ E L A +
Sbjct: 2 KTIGLIGGMSWESTTSY-----------------YQIINETIKKELGGLHSAKILLYSVD 44
Query: 141 TVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+++H + Q L LEQAGA IV+ + H + E +IP LH+
Sbjct: 45 FAEIEHYQAVGDWEKSGQLLADVAQRLEQAGADFIVICTNTMHKVAPQIQEKITIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ A+ L ++ ++G+L T T++ FY+EKL G EV++PD+A + V
Sbjct: 105 AQATAQALLADGIQ--------KVGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEV 156
Query: 256 IIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK 303
+ L D+ E ++ I L AVI+G E+ G+L K
Sbjct: 157 NRIIYDELCLGDIKESSKQTYLTIIDDLKKAGAEAVILGCTEI-GLLVK 204
>gi|47570153|ref|ZP_00240809.1| aspartate racemase [Bacillus cereus G9241]
gi|47553172|gb|EAL11567.1| aspartate racemase [Bacillus cereus G9241]
Length = 232
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 108/261 (41%), Gaps = 46/261 (17%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKS-- 139
TIG+IGG+S ST + +NEE+ +HS K
Sbjct: 3 TIGLIGGMSWESTAEYY----------------------RIINEEIKSRLGGLHSAKCLI 40
Query: 140 KTVQLDHIRG--------AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
+V + I G + + L + L+ GA I++ + H + E IP
Sbjct: 41 NSVDFEEIEGFQSSGDWDSAGEILGNAAYSLQMGGADFIIICTNTMHKVIEKIKENIHIP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ + AKE+K ++ +G+L T T+ FY+ +++ +V++P +
Sbjct: 101 VLHIADATAKEMKRKGIQT--------VGLLGTKYTMEQDFYKSRIKENDIKVIVPLEKN 152
Query: 252 MEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK 309
E + +I T E + + +R + I+ L+ + +I+G E+ G+L K + +
Sbjct: 153 REKINEVIYT-ELCLGKIVSQSREYYKTVIEDLVQKGAQGIILGCTEI-GLLIKQEDVSI 210
Query: 310 KCIDPMDALARSTVTWARSNK 330
D A V +A N+
Sbjct: 211 PIFDTTHIHAVEAVNFALQNR 231
>gi|395006986|ref|ZP_10390771.1| aspartate racemase [Acidovorax sp. CF316]
gi|394314983|gb|EJE51821.1| aspartate racemase [Acidovorax sp. CF316]
Length = 230
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 14/140 (10%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L AGA IV+ + H G ++ +PFLH+ V + ++ L+ R+G+
Sbjct: 71 LHAAGADAIVLCTNTMHKLAGTIAAATPLPFLHIAAPVGEAARQCGLR--------RLGL 122
Query: 222 LATDATLSAGFYQEKL-QNQGFEVVLPDKATMEHVIIPTIEALNH---RDMEGARNLLRI 277
LAT T+ F ++KL Q+ G +VV PD T V E L RD +R +
Sbjct: 123 LATAFTMEQPFLKDKLAQDHGLQVVTPDAPTRAEVHRVIYEELCQGIVRD--ASRGFYQR 180
Query: 278 GIQLLLVRAVNAVIIGSDEM 297
I L + +A+++G E+
Sbjct: 181 AIAQLQAQGCDAIVLGCTEI 200
>gi|312796799|ref|YP_004029721.1| aspartate racemase [Burkholderia rhizoxinica HKI 454]
gi|312168574|emb|CBW75577.1| Aspartate racemase (EC 5.1.1.13) [Burkholderia rhizoxinica HKI 454]
Length = 253
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 106/248 (42%), Gaps = 23/248 (9%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
+ +GI+GG+ +T FL L + A+ ++ PF++ + P + ++
Sbjct: 10 DRLGILGGMGSEATAYFLRLLAQRAGAQVDQDHVPFLLLSCP------------EIPDRS 57
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+++ V + + A L +AG + + C+ +H W + + IPF+ + A+
Sbjct: 58 TAIENGDTIVPTMIHARLAQLARAGCGAVAIACNTAHYWCDEFAAALRIPFIDMISATAR 117
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIE 261
+ + AGS + VL T +T+ Y L + G ++ PD +E + I
Sbjct: 118 QTALSG-----AGSAI---VLGTRSTIRYRLYDHALNDAGVHLIEPDDEIVE-LTSAAIS 168
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARS 321
D+ GA L + +AVI+G E+ V+P + ID + LA +
Sbjct: 169 LSKAGDLPGASAQLARSLAACGALHADAVILGCTELPMVVPAGIRGI-HLIDSVSCLAEA 227
Query: 322 TVTWARSN 329
V W R+
Sbjct: 228 CVQWWRAQ 235
>gi|225572754|ref|ZP_03781509.1| hypothetical protein RUMHYD_00944, partial [Blautia
hydrogenotrophica DSM 10507]
gi|225039893|gb|EEG50139.1| hypothetical protein RUMHYD_00944, partial [Blautia
hydrogenotrophica DSM 10507]
Length = 143
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIG++GG+S S++ + K+V + A + D + ++ ++H + +
Sbjct: 3 TIGMVGGLSWESSIEYY-KIVNEESNKA-------LGEDNTVQSIMYTVNLHEMIGHMER 54
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
+H + + L LE+AGA C+++ + HA+ + E S+P LH+ + V +E+
Sbjct: 55 GEH--EILCRKLTEVCQSLERAGADCVLLCTNTMHAFAEQIQECLSVPLLHIADAVGEEI 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ 240
+E L IG++ T T+ FY+ +L+ +
Sbjct: 113 QEKGLDT--------IGLMGTPFTMEMPFYKNRLEEK 141
>gi|240948955|ref|ZP_04753311.1| RacX protein [Actinobacillus minor NM305]
gi|240296770|gb|EER47381.1| RacX protein [Actinobacillus minor NM305]
Length = 230
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 31/159 (19%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LEQ G I++ + H + + S+PFLH+ +CVA +K+ L ++ +
Sbjct: 71 LEQTGVDGILLATNTMHKVAKQIIDSISVPFLHILDCVANRIKQQNL--------TKVAL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV------------IIPTIEALNHRDME 269
L T T+S FY++ L +G ++P+ T + + I+P +A + +E
Sbjct: 123 LGTAFTMSDNFYRDGLAERGITAIVPEIETQQEIHRIIFEELCVGKILPQSKAFYLKTIE 182
Query: 270 GARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
NL +G + VI+G E+ ++ ++D L
Sbjct: 183 ---NLTALGAE--------GVILGCTEIGLLINQEDSAL 210
>gi|163746431|ref|ZP_02153789.1| aspartate racemase [Oceanibulbus indolifex HEL-45]
gi|161380316|gb|EDQ04727.1| aspartate racemase [Oceanibulbus indolifex HEL-45]
Length = 233
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 85 IGIIGGVSVSSTLNFLGK-LVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+G++GG+ +T+ + L A+D + P ++ +P + + H + + T
Sbjct: 6 VGVLGGMGPEATILLQQRVLATVDAQDDADHLPLLIDMNPQVPSRIAHLIDGTGEDPTAT 65
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L A++Q L E+AGA + MPC+ +H + + SIPFL++ ++ +
Sbjct: 66 L----AAMAQRL-------ERAGATALAMPCNTAHHYAPAIEAAVSIPFLNM-VTLSVDR 113
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA- 262
+L+ SG +G+LA+ A AG + L G + + P A I I+A
Sbjct: 114 AAGQLR-----SGASVGILASPAVRMAGVFDAALDRAGLKSLWPADADRMLAAIRLIKAQ 168
Query: 263 -----LNHRDMEGARNLLRIGIQLLLV 284
E A L G +LLL+
Sbjct: 169 GITPQAQQTLSEAADELTEQGAELLLI 195
>gi|229196449|ref|ZP_04323195.1| hypothetical protein bcere0001_20080 [Bacillus cereus m1293]
gi|228587019|gb|EEK45091.1| hypothetical protein bcere0001_20080 [Bacillus cereus m1293]
Length = 235
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 108/261 (41%), Gaps = 46/261 (17%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKS-- 139
TIG+IGG+S ST + +NEE+ +HS K
Sbjct: 6 TIGLIGGMSWESTAEYY----------------------RIINEEIKSRLGGLHSAKCLI 43
Query: 140 KTVQLDHIRG--------AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
+V + I G + + L + L+ GA I++ + H + E IP
Sbjct: 44 NSVDFEEIEGFQSSGDWDSAGEILGNAAYSLQMGGADFIIICTNTMHKVIEKIKENIHIP 103
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ + AKE+K ++ +G+L T T+ FY+ +++ +V++P +
Sbjct: 104 VLHIADATAKEMKRKGIQT--------VGLLGTKYTMEQDFYKSRIKENDIKVIVPLEKN 155
Query: 252 MEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK 309
E + +I T E + + +R + I+ L+ + +I+G E+ G+L K + +
Sbjct: 156 REKINEVIYT-ELCLGKIVSQSREYYKTVIEDLVQKGAQGIILGCTEI-GLLIKQEDVSI 213
Query: 310 KCIDPMDALARSTVTWARSNK 330
D A V +A N+
Sbjct: 214 PIFDTTYIHAVEAVNFAAGNR 234
>gi|422849836|ref|ZP_16896512.1| aspartate racemase [Streptococcus sanguinis SK115]
gi|325689132|gb|EGD31139.1| aspartate racemase [Streptococcus sanguinis SK115]
Length = 230
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASVHSLKSK 140
TIG+IGG+S ST ++ + + N+ E L A +
Sbjct: 2 KTIGLIGGMSWESTTSY-----------------YQIINETIKKELGGLHSAKILLYSVD 44
Query: 141 TVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+++H + Q L LEQAGA IV+ + H + E +IP LH+
Sbjct: 45 FAEIEHYQAVGDWEKSGQLLADVAQRLEQAGADFIVICTNTMHKVAPQIQEQITIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ A+ L ++ ++G+L T T++ FY+EKL G EV++PD+A + V
Sbjct: 105 AQATAQALLADGIQ--------KVGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEV 156
Query: 256 IIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK 303
+ L D+ E ++ I L AVI+G E+ G+L K
Sbjct: 157 NRIIYDELCLGDIKESSKQTYLTIIDDLKKAGAEAVILGCTEI-GLLVK 204
>gi|229087301|ref|ZP_04219443.1| amino-acid racemase [Bacillus cereus Rock3-44]
gi|228696003|gb|EEL48846.1| amino-acid racemase [Bacillus cereus Rock3-44]
Length = 227
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 36/254 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK P ++ C P +
Sbjct: 2 IGILAGMGPKSTGPFVDTVVEQCQKIYGAKHDMNFPHMMIYSCPTPFYIDR--------- 52
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
+DH A+ Q + LE G I MPC+ +H + + S+P L++ +
Sbjct: 53 -----PIDH--KAMEQAIITGAQKLESTGVDFIAMPCNTAHLYFDQLQNSVSVPVLNMVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
KE+ +K R+ +LATDAT+ +G YQ+ + + + + K + + I
Sbjct: 106 ETLKEIPN-HIK--------RVALLATDATIQSGIYQDGIAKRDMDYI--HKNSWQTTIT 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++ A N L + L AV+AVI+ ++ VL P +D
Sbjct: 155 QIISNIKTGNINKA-NELWYTLCTELSEAVDAVIVACTDL-NVLSNTAPYNYYLVDSSTC 212
Query: 318 LARSTVTWARSNKK 331
LA++ V+ S +K
Sbjct: 213 LAQAVVSTYLSFQK 226
>gi|423576063|ref|ZP_17552182.1| aspartate racemase [Bacillus cereus MSX-D12]
gi|401208292|gb|EJR15061.1| aspartate racemase [Bacillus cereus MSX-D12]
Length = 232
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 108/261 (41%), Gaps = 46/261 (17%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKS-- 139
TIG+IGG+S ST + +NEE+ +HS K
Sbjct: 3 TIGLIGGMSWQSTAEYY----------------------RIINEEIKSRLGGLHSAKCLI 40
Query: 140 KTVQLDHIRG--------AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
+V + I G + + L + L+ GA I++ + H + E IP
Sbjct: 41 NSVDFEEIEGFQSSGDWDSAGEILGNAAYSLQMGGADFIIICTNTMHKVIEKIKENIHIP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ + AKE+K ++ +G+L T T+ FY+ +++ +V++P +
Sbjct: 101 VLHIADATAKEMKRKGIQT--------VGLLGTKYTMEQDFYKSRIKENDIKVIVPLEKN 152
Query: 252 MEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK 309
E + +I T E + + +R + I+ L+ + +I+G E+ G+L K + +
Sbjct: 153 REKINEVIYT-ELCLGKIVSQSREYYKTVIEDLVQKGAQGIILGCTEI-GLLIKQEDVSI 210
Query: 310 KCIDPMDALARSTVTWARSNK 330
D A V +A N+
Sbjct: 211 PIFDTTYIHAVEAVNFAVGNR 231
>gi|423676036|ref|ZP_17650975.1| aspartate racemase [Bacillus cereus VDM062]
gi|401308085|gb|EJS13500.1| aspartate racemase [Bacillus cereus VDM062]
Length = 232
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 12/171 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L++ GA I++ + H + E +IP LH+ + AKE+K ++ IG+
Sbjct: 71 LQKGGADFIIICTNTMHKVVEKIKENINIPVLHIADTTAKEIKRKGIQT--------IGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV--IIPTIEALNHRDMEGARNLLRIGI 279
L T T+ FY+ +++ +V++P + E + II T E + +R + I
Sbjct: 123 LGTKYTMEQDFYKSRIEENNIKVIVPVEKNREKINEIIYT-ELCLGKITSQSREYYKRVI 181
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNK 330
+ L+ + +I+G E+ G+L K + + D A V +A N+
Sbjct: 182 EELVQKGAQGIILGCTEI-GLLIKQEDISVPIFDTTHIHAIEAVNFALHNR 231
>gi|328956897|ref|YP_004374283.1| aspartate racemase [Carnobacterium sp. 17-4]
gi|328673221|gb|AEB29267.1| aspartate racemase [Carnobacterium sp. 17-4]
Length = 234
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 29/179 (16%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELF-HASVHSLKSKT 141
N I+GG+ +T NFL +L + P + N LF HA + S
Sbjct: 3 NFFAILGGMGTLATTNFLIEL------NKRHTP---TKDQDFFNYMLFNHAEIPDRTSYI 53
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGA---RCIVMPCHISHAWHGDVSEGCSIPFLH-VGE 197
+ + L A +EQ IVMPC+ +H + D+ + SIP ++ + E
Sbjct: 54 LD-----NSAPSPLPALLADIEQLNVLKPDFIVMPCNTAHYFINDLIDATSIPIINMIKE 108
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
VA + + + +IG+ T TL + Y+ +L G+EV+LPD T++H I
Sbjct: 109 TVAT---------IPSNTTKKIGLAVTQGTLESQLYERELLFNGYEVILPD-TTLQHKI 157
>gi|228997316|ref|ZP_04156938.1| Aspartate racemase [Bacillus mycoides Rock3-17]
gi|229004941|ref|ZP_04162668.1| Aspartate racemase [Bacillus mycoides Rock1-4]
gi|228756289|gb|EEM05607.1| Aspartate racemase [Bacillus mycoides Rock1-4]
gi|228762408|gb|EEM11333.1| Aspartate racemase [Bacillus mycoides Rock3-17]
Length = 243
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVR-IG 220
LE+AGA IV+ + H ++ + SIP LH+ + A E+K+ G+R +G
Sbjct: 74 LEKAGADFIVICTNTMHKVISNIKDKVSIPILHIADATAMEIKK---------QGIRSVG 124
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+L T T+ FY+ +++ +G V++P++ E V
Sbjct: 125 LLGTKYTMEQDFYKSRIEEKGMRVMIPNETDRELV 159
>gi|430004021|emb|CCF19812.1| conserved protein of unknown function [Rhizobium sp.]
Length = 238
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 18/172 (10%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKL-KPLEAGSGVRIG 220
LE AGA C+++ + H +V+ IP +H+ + A L+ L +PL
Sbjct: 71 LEAAGASCVLICTNTMHLIADEVAGAVRIPLIHIIDETAAALRAQGLTRPL--------- 121
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPTIEALNHRDMEGARNLLRI 277
+LAT T+ GFY ++++ G +V++P D+ M +I + A + R R L
Sbjct: 122 LLATRYTMEHGFYTDRMKTLGIDVMVPDSEDRTAMHDIIFSELCAGSVRGDSRDRALAM- 180
Query: 278 GIQLLLVRAVNAVIIGSDEMQGVL-PKDDPLLKKCIDPMDALARSTVTWARS 328
I+ ++VI+G E+ +L PK PL CID A + V +A S
Sbjct: 181 -IEKAKAAGADSVILGCTEICLLLDPKTLPL--PCIDSTTVHAGAAVDFALS 229
>gi|410632215|ref|ZP_11342879.1| aspartate racemase [Glaciecola arctica BSs20135]
gi|410148215|dbj|GAC19746.1| aspartate racemase [Glaciecola arctica BSs20135]
Length = 230
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 106/248 (42%), Gaps = 31/248 (12%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDA----EECPPFVVCNDPALNEELFHASVHSLK 138
TIG+IGG+S ST ++ +L+ K +V D A E L H
Sbjct: 2 KTIGLIGGMSWESTASYY-QLINQGIKQQLGGLHSAKLVLVSVDFAEIEALQH---QGDW 57
Query: 139 SKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
KT ++ L + LE AGA ++ + H VS+ +IP LH+ +
Sbjct: 58 QKTAEI----------LSNAAKSLEAAGADFFLICTNTMHKVASQVSDAVNIPLLHIADA 107
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATME--HV 255
+L K+ +IG++ T T+ GFY+++L ++ +VV+P A + H
Sbjct: 108 TGTQLVADKM--------TKIGLIGTKFTMQQGFYKDRLTDKFSIDVVVPTDAEQDIIHR 159
Query: 256 IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPM 315
+I L D + L+I IQ L R +I+G E+ G+L + K D
Sbjct: 160 VIYQELCLGIVDKQSREQYLKI-IQNLTHRGAQGIILGCTEI-GLLIEKSHTKSKLYDTT 217
Query: 316 DALARSTV 323
A++ V
Sbjct: 218 FIHAQAAV 225
>gi|163942483|ref|YP_001647367.1| aspartate racemase [Bacillus weihenstephanensis KBAB4]
gi|423519443|ref|ZP_17495924.1| aspartate racemase [Bacillus cereus HuA2-4]
gi|163864680|gb|ABY45739.1| aspartate racemase [Bacillus weihenstephanensis KBAB4]
gi|401158462|gb|EJQ65853.1| aspartate racemase [Bacillus cereus HuA2-4]
Length = 224
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPA---LNEELFHASVHS 136
IGI+ G+ ST F+ +V Y AK + P ++ + P ++ + HA++
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDIDFPHMMIYSCPTPFYMDRPIDHAAM-- 59
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
K + I GA LE G I MPC+ +H + ++ +IP L++
Sbjct: 60 --KKAI----IEGAQK---------LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIV 104
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
+ K + E + R+ +LAT+AT+ A YQ+ + + E + ++ + +I
Sbjct: 105 DETLKAIPE---------NTKRVALLATEATVQASIYQDGITKRDIEYIHNEQ--WQEMI 153
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I + ++E AR L + + L L V+ II ++ V+ +D +D
Sbjct: 154 NQIITCIKGGEIEEARKLWSLLV-LQLKDEVDTAIIACTDLNVVVSED------FVDSAQ 206
Query: 317 ALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 207 CLAKAVVRIYASNIK 221
>gi|227891689|ref|ZP_04009494.1| aspartate racemase [Lactobacillus salivarius ATCC 11741]
gi|417787842|ref|ZP_12435525.1| aspartate racemase [Lactobacillus salivarius NIAS840]
gi|417809397|ref|ZP_12456078.1| aspartate racemase [Lactobacillus salivarius GJ-24]
gi|227866492|gb|EEJ73913.1| aspartate racemase [Lactobacillus salivarius ATCC 11741]
gi|334308019|gb|EGL99005.1| aspartate racemase [Lactobacillus salivarius NIAS840]
gi|335350321|gb|EGM51817.1| aspartate racemase [Lactobacillus salivarius GJ-24]
Length = 237
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKL-VWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
N IIGG+ +T +++ +L + A + +E +++ N HA+V +
Sbjct: 3 NFFTIIGGMGTMATESYIHQLNLRTPANNDQEYLNYILVN---------HATVPDRTAYI 53
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGAR--CIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
LD+ + L F +QA + +PC+ +H ++ ++ +P LH+
Sbjct: 54 --LDNSKPNPKIPLLED--FKQQASLKPDFFTLPCNTAHYFYDELQAAVDVPVLHMPRLA 109
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+++K+ + + R+G++AT+ TL G Y +++ + G+E+V P +
Sbjct: 110 VEQIKK------DYPNAKRVGIVATNGTLHDGVYDKEILDAGYELVKPTAEIQAKTMELI 163
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
+ + +D + + ++ +AVI+G E+
Sbjct: 164 YDDIKEKDYVDGKLFYELVEDMVKDEKCDAVILGCTEL 201
>gi|167644868|ref|YP_001682531.1| aspartate racemase [Caulobacter sp. K31]
gi|167347298|gb|ABZ70033.1| aspartate racemase [Caulobacter sp. K31]
Length = 233
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 36/231 (15%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKD----AEECPPFVVCNDPALNEELFHASVHSLKSK 140
IG+IGG+S S+ + +L+ +D + D A E L HA
Sbjct: 6 IGLIGGLSWESSAQYY-RLINEGVRDRVGGVASARSLMWSFDFATIEALQHAGDWD---- 60
Query: 141 TVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISH--AWHGDVSEGCSIPFLHVGEC 198
A++ +L LE GA +V+ + H AW D + IP LH+ +
Sbjct: 61 ---------ALAGHLADAAKALETGGADFLVLCTNTMHRCAWAIDAA--VQIPLLHIADP 109
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLP---DKATMEH 254
A ++ A + R+G+L T T+ FY+ +L+++ G EV++P D+A +
Sbjct: 110 TAAAIQAAGIT--------RVGLLGTAFTMEQDFYRGRLEDKFGLEVLVPDEDDRAAVHG 161
Query: 255 VIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
+I E + + + +R + R I+ L+ R VI+G E+ ++ ++D
Sbjct: 162 IIYR--ELVAGQVLGTSREVYRAVIRRLVARGAQGVILGCTEIMLLIGQED 210
>gi|229085172|ref|ZP_04217419.1| Aspartate racemase [Bacillus cereus Rock3-44]
gi|228698153|gb|EEL50891.1| Aspartate racemase [Bacillus cereus Rock3-44]
Length = 230
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 15/149 (10%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVR-IG 220
LE+AGA IV+ + H ++ E +IP LH+ + A E+K+ G+R +G
Sbjct: 71 LEKAGADFIVICTNTMHKVISNIKENVNIPILHIADATAMEIKK---------HGIRSVG 121
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI---EALNHRDMEGARNLLRI 277
+L T T+ FY+ ++ +G +V++P++ M+ I+ I E + + AR+ +
Sbjct: 122 LLGTKYTMEQDFYKSCIEEKGMKVIIPNE--MDREIVNRIIYNELCLGKINQTARDSYKR 179
Query: 278 GIQLLLVRAVNAVIIGSDEMQGVLPKDDP 306
I L+ +I+G E+ ++ ++D
Sbjct: 180 IIHSLVQNGAEGIILGCTEIGLLVKQEDT 208
>gi|430819894|ref|ZP_19438538.1| aspartate racemase [Enterococcus faecium E0045]
gi|430440097|gb|ELA50374.1| aspartate racemase [Enterococcus faecium E0045]
Length = 243
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 13/164 (7%)
Query: 170 IVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLS 229
IV+ C+ +H + ++ IP LH+ A EL + +G R+ +L T+ ++
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL------VCQHTTG-RVAILGTEGSMK 132
Query: 230 AGFYQEKLQNQGFEVVLPDKATME---HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRA 286
AG Y+ +++N GFE V+PD E ++I I+ ++ + E +L ++ L
Sbjct: 133 AGIYEREVKNLGFETVIPDTVLQEKINYLIYHEIKESDYLNQELYYEILEEAVERL---N 189
Query: 287 VNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNK 330
VI+G E+ + + ID LA T+ A + +
Sbjct: 190 CEKVILGCTELSLMHEFAEDNHYPVIDAQSILADRTIERALAER 233
>gi|423606011|ref|ZP_17581904.1| aspartate racemase [Bacillus cereus VD102]
gi|401243366|gb|EJR49737.1| aspartate racemase [Bacillus cereus VD102]
Length = 232
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 108/261 (41%), Gaps = 46/261 (17%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKS-- 139
TIG+IGG+S ST + +NEE+ +HS K
Sbjct: 3 TIGLIGGMSWESTAEYY----------------------RIINEEIKSRLGGLHSAKCLI 40
Query: 140 KTVQLDHIRG--------AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
+V + I G + + L + L+ GA I++ + H + E IP
Sbjct: 41 NSVDFEEIEGFQSSGDWDSAGEILGNAAYSLQMGGADFIIICTNTMHKVIEKIKENIHIP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ + AKE+K ++ +G+L T T+ FY+ +++ +V++P +
Sbjct: 101 VLHIADATAKEMKRKGIQT--------VGLLGTKYTMEQDFYKSRIKENDIKVIVPLEKN 152
Query: 252 MEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK 309
E + +I T E + + +R + I+ L+ + +I+G E+ G+L K + +
Sbjct: 153 REKINEVIYT-ELCLGKIVSQSREYYKTVIEDLVQKGAQGIILGCTEI-GLLIKQEDVSI 210
Query: 310 KCIDPMDALARSTVTWARSNK 330
D A V +A N+
Sbjct: 211 PIFDTTYIHAVEAVNFAVGNR 231
>gi|91787877|ref|YP_548829.1| aspartate racemase [Polaromonas sp. JS666]
gi|91697102|gb|ABE43931.1| Aspartate racemase [Polaromonas sp. JS666]
Length = 251
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 24/248 (9%)
Query: 76 DSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVH 135
+ L+++ +GI+GG+ ++ +F V A E + +D A E A V
Sbjct: 2 NGLMHKTRVVGILGGMGPAAGADFARLFVQACADRMRE--QGIPVSDQAFPEHWL-AQV- 57
Query: 136 SLKSKTVQLDHIRGAVSQNLR---HKRAFLEQAGARCIVMPCHISHAWHGDVSEGC-SIP 191
+ ++ L+ Q L L GA + + C+ +HAWH ++ E +
Sbjct: 58 PVPDRSTALESPGPGGHQPLDPMLQAMGKLAALGASTVAVACNTAHAWHAELQERFPQLE 117
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVR-IGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
LHV VA+ L A GVR +G+LAT+ T AG Y + L+ G + +P
Sbjct: 118 VLHVAREVAQAL---------ASRGVREVGLLATEGTYRAGLYDQALRQAGLQCHIPLAE 168
Query: 251 TMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVR-AVNAVIIGSDEMQ---GVLPKDDP 306
E ++ + +M AR+ Q L R ++ +++G E+ G +P+ D
Sbjct: 169 ERERLMDGIYHGVKVGNMALARDCFASVAQALARRHGLSTLVLGCTEIPLALGAVPEMDE 228
Query: 307 LLKKCIDP 314
L +DP
Sbjct: 229 L--DLVDP 234
>gi|11499017|ref|NP_070251.1| aspartate racemase [Archaeoglobus fulgidus DSM 4304]
gi|2649148|gb|AAB89824.1| aspartate racemase [Archaeoglobus fulgidus DSM 4304]
Length = 225
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVR-IG 220
LE AGA+ +++ + H V + IP +++ + A+ LK G GV+ G
Sbjct: 69 LENAGAKAVLICTNTMHKVADAVEKRIGIPLINIIDVTAEALK---------GDGVKKAG 119
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATME---HVIIPTIEALNHRDMEGARNLLRI 277
+L T T+ GFYQE+++ G EV++P+K H II L E R L +I
Sbjct: 120 LLGTKFTMEDGFYQERMKKHGIEVIVPEKEEDRNAIHSIIFDELCLGIIREESERRLRKI 179
Query: 278 GIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
+ L R +I+G E+ +L ++
Sbjct: 180 -VDELKERGAEGIILGCTELPLILRDEE 206
>gi|423691678|ref|ZP_17666198.1| aspartate racemase [Pseudomonas fluorescens SS101]
gi|388000855|gb|EIK62184.1| aspartate racemase [Pseudomonas fluorescens SS101]
Length = 241
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 23/144 (15%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L+ GA C+V+ + H + SIPFLH+ + A LEAG+ + +G+
Sbjct: 71 LQAGGADCVVLCTNTMHLVAPRIEAAVSIPFLHIADATAT-------AALEAGT-LTVGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPD--------KATMEHVIIPTIEALNHRDMEGARN 273
L T T+ F + +L QG V++PD + E + + I + +R
Sbjct: 123 LGTAFTMEQDFLKSRLAAQGLTVLVPDADERKAVHRIIYEELCVGVIS-------DASRQ 175
Query: 274 LLRIGIQLLLVRAVNAVIIGSDEM 297
+ + IQ L R A+I+G E+
Sbjct: 176 VYQRVIQTLAARGAQAIILGCTEI 199
>gi|227513984|ref|ZP_03944033.1| aspartate racemase [Lactobacillus fermentum ATCC 14931]
gi|227087628|gb|EEI22940.1| aspartate racemase [Lactobacillus fermentum ATCC 14931]
Length = 241
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 170 IVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLS 229
V+ C+ +H + D+ IP L++ E KE+K K+KP ++G+LAT T+
Sbjct: 84 FVLICNTAHYFFKDLQAATEIPILNMLEETVKEIK--KIKP----DAKKVGLLATPGTVE 137
Query: 230 AGFYQEKLQNQGFEVVLPDKATM---EHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRA 286
+G Y +Q G+E + P + + E +I I+ H D L+R +++ +
Sbjct: 138 SGIYDHYIQAAGYEELKPTQEILDATEDLIYHDIKEAGHSDGAKYHELVR---KMVEEQG 194
Query: 287 VNAVIIGSDEM 297
+ VI+G E+
Sbjct: 195 ADVVILGCTEL 205
>gi|224159171|ref|XP_002338051.1| predicted protein [Populus trichocarpa]
gi|222870507|gb|EEF07638.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 11/175 (6%)
Query: 152 SQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPL 211
+Q+L + G R + + C+ +HAWHG + P LHV ++A L +
Sbjct: 61 AQHLLQGVGRMAALGVRSVALACNTAHAWHGQLQ--ALFPQLHVLHIA----RQAALH-M 113
Query: 212 EAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDME-G 270
+AG + VLAT T +G Y L G + PD ++ + + DM+
Sbjct: 114 QAGGAQQAIVLATQGTYDSGLYDAALAECGITALQPDAQGRARLMQGIYDGVKQGDMDLA 173
Query: 271 ARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK--KCIDPMDALARSTV 323
AR + LL VI+G E+ LP+ PL + K +DP LA++ V
Sbjct: 174 ARCFGEVLAPLLQRHGDVPVIMGCTEIPLALPQ-SPLARGAKLVDPAWILAQALV 227
>gi|381406162|ref|ZP_09930845.1| putative aspartate/glutamate racemase [Pantoea sp. Sc1]
gi|380735464|gb|EIB96528.1| putative aspartate/glutamate racemase [Pantoea sp. Sc1]
Length = 230
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+AGA+ IV+ + H +S +IP LH+ + + +++A L+ ++G+
Sbjct: 71 LERAGAQFIVLCTNTMHKVAAQISAATTIPLLHIADATGRRIRQAGLR--------KVGL 122
Query: 222 LATDATLSAGFYQEKLQNQ-GFEVVLPDK 249
LAT T+ FY+ +LQ Q V+ PD+
Sbjct: 123 LATRFTMEQAFYRGRLQEQFDLTVITPDE 151
>gi|222095821|ref|YP_002529878.1| aspartate racemase [Bacillus cereus Q1]
gi|221239879|gb|ACM12589.1| aspartate racemase [Bacillus cereus Q1]
Length = 232
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 108/261 (41%), Gaps = 46/261 (17%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKS-- 139
TIG+IGG+S ST + +NEE+ +HS K
Sbjct: 3 TIGLIGGMSWESTAEYY----------------------RIINEEIKSRLGGLHSAKCLI 40
Query: 140 KTVQLDHIRG--------AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
+V + I G + + L + L+ GA I++ + H + E IP
Sbjct: 41 NSVDFEEIEGFQSSGDWDSAGEILGNAAYSLQMGGADFIIICTNTMHKVVEKIKENIHIP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ + AKE+K ++ +G+L T T+ FY+ +++ +V++P +
Sbjct: 101 VLHIADATAKEMKRKGIQT--------VGLLGTKYTMEQDFYKSRIKENDIKVIVPLEKN 152
Query: 252 MEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK 309
E + +I T E + + +R + I+ L+ + +I+G E+ G+L K + +
Sbjct: 153 REKINEVIYT-ELCLGKIVSQSREYYKTVIEDLVQKGAQGIILGCTEI-GLLIKQEDVSI 210
Query: 310 KCIDPMDALARSTVTWARSNK 330
D A V +A N+
Sbjct: 211 PIFDTTYIHAVEAVNFAVENR 231
>gi|229062440|ref|ZP_04199756.1| amino-acid racemase [Bacillus cereus AH603]
gi|228716911|gb|EEL68598.1| amino-acid racemase [Bacillus cereus AH603]
Length = 224
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 111/253 (43%), Gaps = 43/253 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPA---LNEELFHASVHS 136
IGI+ G+ ST F+ +V Y AK + P ++ + P ++ + HA++
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAGCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHAAM-- 59
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
K + I GA LE G I MPC+ +H + ++ +IP L++
Sbjct: 60 --KKAI----IEGAQK---------LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIV 104
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
+ K + E + + +LAT+AT+ AG YQ+ + + E V ++ + +I
Sbjct: 105 DETLKAIPE---------NTKTVALLATEATVQAGIYQDGIAKRNIEYVHNEQ--WQEMI 153
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I + ++E AR L + + L L V+ II ++ V+ +D +D
Sbjct: 154 NQIISCIKGGEIEEARKLWSL-LVLQLKDEVDTAIIACTDLNVVVSED------FVDSAQ 206
Query: 317 ALARSTVTWARSN 329
LA++ V SN
Sbjct: 207 CLAKAFVRMYASN 219
>gi|423603563|ref|ZP_17579456.1| aspartate racemase [Bacillus cereus VD102]
gi|401247542|gb|EJR53878.1| aspartate racemase [Bacillus cereus VD102]
Length = 224
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 106/253 (41%), Gaps = 37/253 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ + SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQQSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
K + E + R+ +LAT+AT+ AG YQ+ + E + ++ + I
Sbjct: 106 ETLKAIPE---------TAKRVALLATEATVQAGIYQDGIAKCNIEYIHYER--WQESIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L V+ II ++ V +D +C+ A
Sbjct: 155 QIITYIKSGEVEEARELWN-ALVLQLKDEVDTAIIACTDLNVVASEDFVDSSQCL--AKA 211
Query: 318 LARSTVTWARSNK 330
+ R V R +K
Sbjct: 212 VVRMYVENIRGSK 224
>gi|423419795|ref|ZP_17396884.1| aspartate racemase [Bacillus cereus BAG3X2-1]
gi|401103827|gb|EJQ11806.1| aspartate racemase [Bacillus cereus BAG3X2-1]
Length = 236
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 76/152 (50%), Gaps = 17/152 (11%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ GA I++ + H + SIP LH+ + AKE+K+ ++ +G+
Sbjct: 71 LEKGGADFIIVCTNTMHKVIKHIKNRISIPILHIADATAKEIKQQGIQS--------VGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPT--IEALNHRDMEGARNLLR 276
L T T+ FY+ +++ +V++P D+ T+ +I + +N + E +++++
Sbjct: 123 LGTKYTMEQDFYKLRIEENDIKVIVPTEEDRETVNKIIYNELCLGKINQQSREYFKSVMK 182
Query: 277 IGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
+Q R +I+G E+ ++ ++D L+
Sbjct: 183 DLVQ----RGAKGIILGCTEIGLLVKQEDSLV 210
>gi|184154717|ref|YP_001843057.1| aspartate racemase [Lactobacillus fermentum IFO 3956]
gi|260663254|ref|ZP_05864146.1| aspartate racemase [Lactobacillus fermentum 28-3-CHN]
gi|183226061|dbj|BAG26577.1| aspartate racemase [Lactobacillus fermentum IFO 3956]
gi|260552446|gb|EEX25497.1| aspartate racemase [Lactobacillus fermentum 28-3-CHN]
Length = 237
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 170 IVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLS 229
V+ C+ +H + D+ IP L++ E KE+K K+KP ++G+LAT T+
Sbjct: 80 FVLICNTAHYFFKDLQAATEIPILNMLEETVKEIK--KIKP----DAKKVGLLATPGTVE 133
Query: 230 AGFYQEKLQNQGFEVVLPDKATM---EHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRA 286
+G Y +Q G+E + P + + E +I I+ H D L+R +++ +
Sbjct: 134 SGIYDHYIQAAGYEELKPTQEILDATEDLIYHDIKEAGHSDGAKYHELVR---KMVEEQG 190
Query: 287 VNAVIIGSDEM 297
+ VI+G E+
Sbjct: 191 ADVVILGCTEL 201
>gi|422881176|ref|ZP_16927632.1| aspartate racemase [Streptococcus sanguinis SK355]
gi|332364902|gb|EGJ42670.1| aspartate racemase [Streptococcus sanguinis SK355]
Length = 230
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 101/233 (43%), Gaps = 42/233 (18%)
Query: 83 NTIGIIGGVSVSSTLNF-----------LGKLVWYSAKDAEECPPFVVCNDPALNEELFH 131
TIG+IGG+S ST ++ LG L +SAK F E+ H
Sbjct: 2 KTIGLIGGMSWESTTSYYQIINETIKKELGGL--HSAKILLYSVDFA---------EIEH 50
Query: 132 ASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
V K+ QL L LEQAGA IV+ + H + E +IP
Sbjct: 51 YQVVGDWEKSGQL----------LTDIAQRLEQAGADFIVICTNTMHKIAPQIQEKITIP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ + A+ L ++ ++G+L T T++ FY+EKL G EV++PD+A
Sbjct: 101 ILHIAQATAQALLADGIQ--------KVGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAG 152
Query: 252 MEHVIIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK 303
+ V + L D+ E ++ I L AVI+G E+ G+L K
Sbjct: 153 ITEVNRIIYDELCLGDIKENSKQTYLAVIDDLKKAGAEAVILGCTEI-GLLVK 204
>gi|422866594|ref|ZP_16913219.1| aspartate racemase [Streptococcus sanguinis SK1058]
gi|327488703|gb|EGF20503.1| aspartate racemase [Streptococcus sanguinis SK1058]
Length = 230
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 103/252 (40%), Gaps = 34/252 (13%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASVHSLKSK 140
TIG+IGG+S ST ++ + + N+ E L A +
Sbjct: 2 KTIGLIGGMSWESTTSY-----------------YQIINETIKKELGGLHSAKILLYSVD 44
Query: 141 TVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+++H + Q L LEQAGA IV+ + H + E +IP LH+
Sbjct: 45 FAEIEHYQAVGDWEKSGQLLADVAKRLEQAGADFIVICTNTMHKVAPQIQEQIAIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ A+ L ++ ++G+L T T++ FY+EKL G EV++PD+A + V
Sbjct: 105 AQATAQALLADGIQ--------KVGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEV 156
Query: 256 IIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDP 314
+ L D+ E ++ I L AVI+G E+ G+L K D
Sbjct: 157 NRIIYDELCLGDIKESSKQTYLTIIDGLKKAGAEAVILGCTEI-GLLVKQSDTDLPLYDT 215
Query: 315 MDALARSTVTWA 326
A WA
Sbjct: 216 TVIHAEKAAEWA 227
>gi|254508322|ref|ZP_05120444.1| aspartate racemase [Vibrio parahaemolyticus 16]
gi|219548736|gb|EED25739.1| aspartate racemase [Vibrio parahaemolyticus 16]
Length = 232
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 19/166 (11%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIG+IGG+S ST+ + L + + ++ A ++ SV+ + + +Q
Sbjct: 3 TIGVIGGMSWESTVTYYQGL-------NQGIKERLGGHNSA---KVLINSVNFAEIEQMQ 52
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
D + + L LE+AGA I++ + H G + E SIP LH+ + EL
Sbjct: 53 RDGAWDSAAVVLCKAAQSLEKAGADFILIATNTMHKLAGQIEESISIPLLHIADATGHEL 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPD 248
+ ++G+L T T+ FY++++ N+ G EV++P+
Sbjct: 113 TRRGIS--------KVGLLGTAFTMEEDFYKQRITNKFGIEVIVPN 150
>gi|218905985|ref|YP_002453819.1| amino acid racemase [Bacillus cereus AH820]
gi|218539387|gb|ACK91785.1| probable amino-acid racemase [Bacillus cereus AH820]
Length = 224
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 41/252 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFIDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ + SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQQSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
K + E + R+ +LAT+AT+ +G YQ+ + + E + ++ + I
Sbjct: 106 ETLKAIPE---------TAKRVALLATEATVQSGIYQDGIAKRNIEYIHYEQ--WQESIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L V+ II ++ VL +D +D
Sbjct: 155 QIITYIKSGEVEEARELWS-ALVLQLKDEVDTAIIACTDL-NVLASED-----FVDSSQC 207
Query: 318 LARSTVTWARSN 329
LA++ V N
Sbjct: 208 LAKAVVRMYVEN 219
>gi|423383616|ref|ZP_17360872.1| aspartate racemase [Bacillus cereus BAG1X1-2]
gi|423529937|ref|ZP_17506382.1| aspartate racemase [Bacillus cereus HuB1-1]
gi|401642442|gb|EJS60152.1| aspartate racemase [Bacillus cereus BAG1X1-2]
gi|402447551|gb|EJV79402.1| aspartate racemase [Bacillus cereus HuB1-1]
Length = 231
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 108/234 (46%), Gaps = 38/234 (16%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL--FHAS---VHSLK 138
TIG+IGG+S ST + + + N+ + E L H++ ++S+
Sbjct: 3 TIGLIGGMSWESTSEY-----------------YRIINEE-IKERLGGLHSAKCLINSVD 44
Query: 139 SKTVQLDHIRG---AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ ++ RG + L + L++ GA I++ + H G + E IP LH+
Sbjct: 45 FEEIERFQSRGDWNGAGEVLANAAYSLQKGGADFIIICTNTMHKVVGKIKEKIDIPVLHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ AKE+K ++ ++G+L T T+ FY+ +++ +V++P + + +
Sbjct: 105 ADATAKEIKRKDIQ--------KVGLLGTKYTMEQDFYKSRIEENNIKVIVPSEKNRKEI 156
Query: 256 --IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPL 307
+I T E + + +R + ++ L+ + +I+G E+ G+L K + +
Sbjct: 157 NKVIYT-ELCLGKIVSQSREYYKRVMEELVQKGAQGIILGCTEI-GLLIKQENV 208
>gi|418528619|ref|ZP_13094567.1| aspartate racemase [Comamonas testosteroni ATCC 11996]
gi|371454373|gb|EHN67377.1| aspartate racemase [Comamonas testosteroni ATCC 11996]
Length = 242
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 12/149 (8%)
Query: 163 EQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVL 222
+ GA C+++ + H V+ SIPFLH+ + V + A ++ L G+L
Sbjct: 83 QAGGADCVLLCTNTMHKVADQVAAAVSIPFLHIADPVGAAARAAGVQVL--------GLL 134
Query: 223 ATDATLSAGFYQEKLQNQ-GFEVVLPDKA--TMEHVIIPTIEALNHRDMEGARNLLRIGI 279
T T+ F +E+L+ Q G +V++PD+A T H II E + + +R L + I
Sbjct: 135 GTRFTMEQPFMRERLEQQFGLKVLVPDEAERTQVHRIIYE-ELCVGQISDVSRKLYQRAI 193
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
+ L R AV++G E+ ++ +D +L
Sbjct: 194 ESLAARGAQAVVLGCTEIGLLIKSEDSVL 222
>gi|422861773|ref|ZP_16908413.1| aspartate racemase [Streptococcus sanguinis SK330]
gi|327468006|gb|EGF13496.1| aspartate racemase [Streptococcus sanguinis SK330]
Length = 230
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 103/252 (40%), Gaps = 34/252 (13%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASVHSLKSK 140
TIG+IGG+S ST ++ + + N+ E L A +
Sbjct: 2 KTIGLIGGMSWESTTSY-----------------YQIINETIKKELGGLHSAKILLYSVD 44
Query: 141 TVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+++H + Q L LEQAGA IV+ + H + E +IP LH+
Sbjct: 45 FAEIEHYQAVGDWEKSGQLLADVAKRLEQAGADFIVICTNTMHKVAPQIQEQIAIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ A+ L ++ ++G+L T T++ FY+EKL G EV++PD+A + V
Sbjct: 105 AQATAQALLADGIQ--------KVGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEV 156
Query: 256 IIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDP 314
+ L D+ E ++ I L AVI+G E+ G+L K D
Sbjct: 157 NRIIYDELCLGDIKESSKQTYLAVIDDLKKAGAEAVILGCTEI-GLLVKQSETDLPLYDT 215
Query: 315 MDALARSTVTWA 326
A WA
Sbjct: 216 TVIHAEKAAEWA 227
>gi|423403155|ref|ZP_17380328.1| aspartate racemase [Bacillus cereus BAG2X1-2]
gi|423476198|ref|ZP_17452913.1| aspartate racemase [Bacillus cereus BAG6X1-1]
gi|401649379|gb|EJS66960.1| aspartate racemase [Bacillus cereus BAG2X1-2]
gi|402434171|gb|EJV66215.1| aspartate racemase [Bacillus cereus BAG6X1-1]
Length = 232
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 111/257 (43%), Gaps = 38/257 (14%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL--FHAS---VHSLK 138
TIG+IGG+S ST + + + N+ + E L H++ +HS+
Sbjct: 3 TIGLIGGMSWESTSEY-----------------YRIINEE-IKERLGGLHSAKCMIHSVD 44
Query: 139 SKTVQLDHIRG---AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ ++ G + L + L++ GA I++ + H + E IP LH+
Sbjct: 45 FEEIERFQSNGDWNGAGEMLGNAAYSLQRGGADFIIICTNTMHKVVEKIKENIHIPVLHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ AKE+K ++ +G+L T T+ FY+ +++ +V++P + E +
Sbjct: 105 ADATAKEIKRKDIQT--------VGLLGTKYTMEQDFYKLRIEENRIKVMVPSEKDREKI 156
Query: 256 --IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCID 313
+I T L + +R +I I+ L+ +I+G E+ G+L K + + D
Sbjct: 157 NEVIYTELCLG-KITSQSREYYKIVIEELVQEGAQGIILGCTEI-GLLIKQEDVSVPIFD 214
Query: 314 PMDALARSTVTWARSNK 330
A V +A N+
Sbjct: 215 TTHIHAVEAVNFALRNR 231
>gi|340363218|ref|ZP_08685564.1| aspartate racemase [Neisseria macacae ATCC 33926]
gi|339886412|gb|EGQ76066.1| aspartate racemase [Neisseria macacae ATCC 33926]
Length = 230
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 86/216 (39%), Gaps = 21/216 (9%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST V Y E + N A ++ SV + +Q
Sbjct: 3 TIGIIGGMSPEST-------VLYYQIINRETNRRLGGNRSA---KILLDSVDFEEIVRLQ 52
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
A L LE GA +++ + H + + IP LHV + A +
Sbjct: 53 KSGDWAAAGNVLAQSARKLEAGGADFLLLATNTMHKVAPAIEQAAGIPLLHVVDATAAAI 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME--HVIIPTIE 261
K L +G+L T T+S GFY E++ +QG + + P A + H II
Sbjct: 113 KRQGLSA--------VGLLGTRFTMSDGFYTERMSSQGVQTITPTAAEQDEIHRIIFDEL 164
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
LN E AR + I L VI+G E+
Sbjct: 165 CLNRIRPESARYFYDV-IGRLKKEGAQGVILGCTEI 199
>gi|254522508|ref|ZP_05134563.1| aspartate racemase [Stenotrophomonas sp. SKA14]
gi|219720099|gb|EED38624.1| aspartate racemase [Stenotrophomonas sp. SKA14]
Length = 230
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 23/226 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
T+G+IGG+S S+ + +L+ +D A + +L SV K +
Sbjct: 2 KTLGLIGGMSWESSAQYY-RLINEEIRDR---------LGGAHSAQLLLWSVDFAGIKQL 51
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
Q D A+ ++ L+ GA +++ + H + C +P LH+ + A
Sbjct: 52 QHDGDWDALGDHMADAARRLQAGGADLLLICTNTMHKLTDRIEAACPLPLLHIADPTANA 111
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATME--HVIIPT 259
+ +A + R+G+L T T+ FY+ +LQ + G EV++PD H II
Sbjct: 112 IVQAGAR--------RVGLLGTAFTMEQDFYRGRLQERFGLEVLVPDAEDRRSVHDIIYQ 163
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDE-MQGVLPKD 304
E + E +R + I L+ R A+I+G E M V P+D
Sbjct: 164 -ELIAGVVSEQSRRVYAAVIARLIARGAEAIILGCTEIMLLVRPED 208
>gi|407364667|ref|ZP_11111199.1| aspartate racemase [Pseudomonas mandelii JR-1]
Length = 230
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 12/167 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L+ GA C+V+ + H G + SIPFLH+ + + +EAG+ +++G+
Sbjct: 71 LQAGGAECVVLCTNTMHKVAGQIQAAISIPFLHIADPTGQ-------AAVEAGT-LKVGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPD--KATMEHVIIPTIEALNHRDMEGARNLLRIGI 279
L T T+ F +++L G V++PD + H II E E +R + + I
Sbjct: 123 LGTAFTMEQDFLKDRLSATGLTVLVPDAEERNAVHRIIYD-ELCVGVISEASRKVYQQVI 181
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWA 326
+ L R A+I+G E+ G+L K + +D A++ V +A
Sbjct: 182 ESLTRRGAQAIILGCTEI-GLLIKPEHSALPLLDTTALHAQAAVAFA 227
>gi|418960421|ref|ZP_13512309.1| aspartate racemase [Lactobacillus salivarius SMXD51]
gi|380345097|gb|EIA33442.1| aspartate racemase [Lactobacillus salivarius SMXD51]
Length = 237
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKL-VWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
N IIGG+ +T +++ +L + A + +E +++ N HA+V +
Sbjct: 3 NFFTIIGGMGTMATESYIHQLNLRTPANNDQEYLNYILVN---------HATVPDRTAYI 53
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGAR--CIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
LD+ + L F +QA + +PC+ +H ++ ++ +P LH+
Sbjct: 54 --LDNSKPNPKIPLLED--FKQQASLKPDFFTLPCNTAHYFYDELQAAVDVPVLHMPRLA 109
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+++K+ + + R+G++AT+ TL G Y +++ + G+E+V P +
Sbjct: 110 VEQIKQ------DYPNTKRVGIVATNGTLHDGVYDKEILDAGYELVKPTAEIQAKTMELI 163
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
+ + +D + + ++ +AVI+G E+
Sbjct: 164 YDDIKEKDYVDGKLFYELVEDMVKDEKCDAVILGCTEL 201
>gi|42783941|ref|NP_981188.1| aspartate racemase [Bacillus cereus ATCC 10987]
gi|42739871|gb|AAS43796.1| aspartate racemase family protein [Bacillus cereus ATCC 10987]
Length = 225
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 104/253 (41%), Gaps = 43/253 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH-VG 196
K + I+GA LE G I MPC+ +H + ++ SIP L+ V
Sbjct: 59 MKKAI----IKGAQK---------LESTGVDFIAMPCNTAHLYFEELQHSLSIPILNIVD 105
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
E + K K R+ +LAT+AT+ AG YQ+ + + E + T + +I
Sbjct: 106 ETLQIIPKNVK----------RVALLATEATVQAGIYQDGITKRDIEYI--HHETWQEMI 153
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I + + ++E AR L + L L V+ II ++ V +D +D
Sbjct: 154 NQIITYIKYGEVEEARELWN-ALVLQLREEVDTAIIACTDLNVVASED------FVDSSQ 206
Query: 317 ALARSTVTWARSN 329
LA++ V N
Sbjct: 207 CLAKAVVRMYVGN 219
>gi|398311558|ref|ZP_10515032.1| aspartate racemase [Bacillus mojavensis RO-H-1]
Length = 232
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+AGA IV+ + H D+ +IP LH+ + A ++ ++ G+
Sbjct: 71 LEKAGADFIVICTNTMHKVISDIQAMITIPILHIADATAAQMNRQDIRSA--------GL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDM-EGARNLLRIGIQ 280
L T T+ FY+ +++ G +++P+ E + + L ++ + ++N+ I
Sbjct: 123 LGTKYTMEQNFYKTRIETHGINIIVPNDNERELINNIIYQELCLGEIKQSSKNIYHTIIN 182
Query: 281 LLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNKKLTL 334
L+ R +I+G E+ G+L K + D AR V NK L++
Sbjct: 183 NLMSRGAEGIILGCTEI-GLLVKAEDFKVPIFDTTLIHAREAV-----NKSLSI 230
>gi|238759047|ref|ZP_04620217.1| Aspartate racemase [Yersinia aldovae ATCC 35236]
gi|238702724|gb|EEP95271.1| Aspartate racemase [Yersinia aldovae ATCC 35236]
Length = 231
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 110/252 (43%), Gaps = 37/252 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL--FHAS---VHSLKS 139
+G+IGG+S ST+ P + V N + E+L H++ ++S+
Sbjct: 4 LGLIGGMSWESTI-----------------PYYRVINQQ-IKEQLGGLHSAKIILYSVDF 45
Query: 140 KTVQLDHIRG---AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
++ +G +Q L L+ AGA IV+ + H D+ C +P LH+
Sbjct: 46 HEIEQLQAKGDWHTAAQVLADAAVSLKHAGAEVIVVCTNTMHKVADDIETACGLPLLHIA 105
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKL-QNQGFEVVLPDKATMEHV 255
+ A ++K+ ++ +IG+L T T+ FY+ +L + EVV P+ E +
Sbjct: 106 DATAAQIKQQEIN--------KIGLLGTRYTMEQDFYRGRLTEKHHIEVVTPESTDREII 157
Query: 256 IIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDP 314
E L + E +RN R + L+ + V +I G E+ ++ ++D L D
Sbjct: 158 NRIIYEELCLGIISETSRNEYRRIMGELVHQGVQGIIFGCTEITLLVNENDTSL-PVFDT 216
Query: 315 MDALARSTVTWA 326
AR+ +A
Sbjct: 217 TAIHARAAAEYA 228
>gi|228985314|ref|ZP_04145475.1| hypothetical protein bthur0001_20120 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228774410|gb|EEM22815.1| hypothetical protein bthur0001_20120 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 235
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 108/261 (41%), Gaps = 46/261 (17%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKS-- 139
TIG+IGG+S ST + +NEE+ +HS K
Sbjct: 6 TIGLIGGMSWESTAEYY----------------------RIINEEIKSRLGGLHSAKCLI 43
Query: 140 KTVQLDHIRG--------AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
+V + I G + + L + L+ GA I++ + H + E IP
Sbjct: 44 NSVDFEEIEGFQSSGDWDSAGEILGNAAYSLQMGGADFIIICTNTMHKVIEKIKENIHIP 103
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ + AKE+K ++ +G+L T T+ FY+ +++ +V++P +
Sbjct: 104 VLHIADATAKEMKRKGIQT--------VGLLGTKYTMEQDFYKSRIKENDIKVIVPLEKN 155
Query: 252 MEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK 309
E + +I T E + + +R + I+ L+ + +I+G E+ G+L K + +
Sbjct: 156 REKINEVIYT-ELCLGKIVSQSREYYKTVIEDLVQKGAQGIILGCTEI-GLLIKQEDVSI 213
Query: 310 KCIDPMDALARSTVTWARSNK 330
D A V +A N+
Sbjct: 214 PIFDTTYIHAVEAVNFAVGNR 234
>gi|423582962|ref|ZP_17559073.1| aspartate racemase [Bacillus cereus VD014]
gi|401210271|gb|EJR17023.1| aspartate racemase [Bacillus cereus VD014]
Length = 224
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 108/256 (42%), Gaps = 45/256 (17%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVANCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH-VG 196
K + I GA LE GA I MPC+ +H + ++ SIP L+ V
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQHSLSIPILNIVD 105
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHV 255
E + K K R+ +LAT+AT+ +G YQ+ + + E + +K TM +
Sbjct: 106 ETLQAIPKNTK----------RVALLATEATIQSGIYQDGIAKRNIEYIHYEKWQTMINQ 155
Query: 256 IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPM 315
II I++ ++E AR L + + L V II ++ V +D +D
Sbjct: 156 IITYIKS---GEVEEARKLWS-ALVVQLKDEVATAIIACTDLNVVASED------FVDSS 205
Query: 316 DALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 206 QCLAKAVVRMYLSNIK 221
>gi|85707890|ref|ZP_01038956.1| putative aspartate/glutamate racemase [Erythrobacter sp. NAP1]
gi|85689424|gb|EAQ29427.1| putative aspartate/glutamate racemase [Erythrobacter sp. NAP1]
Length = 236
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
+G+IGG+S ST + ++ + A P + + P L E L +++L+ +
Sbjct: 6 LGLIGGMSWVSTGIYYDRINRIVQRRA--AP---MASAPMLIESLDFCQLYALREEK-DW 59
Query: 145 DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELK 204
G +S++ + LE AGA +++ + H + DVS G IP LH+ + V K LK
Sbjct: 60 KRASGILSESAKR----LEGAGAEALIIGANSMHKLYDDVSAGVDIPILHIADYVGKALK 115
Query: 205 EAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME 253
A K ++ T ++ FY+++L G +++ P+ +E
Sbjct: 116 RAGHKT--------AALIGTRNVMTESFYRKRLVAHGIDLLPPNMINVE 156
>gi|419795743|ref|ZP_14321325.1| aspartate racemase [Neisseria sicca VK64]
gi|385700190|gb|EIG30445.1| aspartate racemase [Neisseria sicca VK64]
Length = 230
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 86/216 (39%), Gaps = 21/216 (9%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST V Y E + N A ++ SV + +Q
Sbjct: 3 TIGIIGGMSPEST-------VLYYQIINRETNRRLGGNRSA---KILLDSVDFEEIVRLQ 52
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
A L LE GA +++ + H + + IP LHV + A +
Sbjct: 53 KSGDWAAAGNVLAQSARKLEAGGADFLLLATNTMHKVAPAIEQAAGIPLLHVVDATAAAI 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME--HVIIPTIE 261
K L +G+L T T+S GFY E++ +QG + + P A + H II
Sbjct: 113 KRQGLSA--------VGLLGTRFTMSDGFYTERMGSQGVQTITPTAAEQDEIHRIIFDEL 164
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
LN E AR + I L VI+G E+
Sbjct: 165 CLNRIRSESARYFYDV-IGRLKNEGAQGVILGCTEI 199
>gi|365838028|ref|ZP_09379384.1| aspartate racemase [Hafnia alvei ATCC 51873]
gi|364560828|gb|EHM38748.1| aspartate racemase [Hafnia alvei ATCC 51873]
Length = 233
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 36/233 (15%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE-ELFHAS---VHSLK 138
T+G++GG+S ST+ P + + N+ N+ H++ ++S+
Sbjct: 2 KTLGLLGGMSWESTV-----------------PYYRIINETVKNQLGGLHSARLVLYSVD 44
Query: 139 SKTVQLDHIRGAVSQN---LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
V+ +RG +Q L L+ AGA IV+ + H + C +P LH+
Sbjct: 45 FAEVEHLQMRGEWAQAGELLADAAQHLQAAGAEGIVVCTNTMHKVAEQIESRCGLPLLHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATME- 253
+ A +K L RIG+L T T+ FY+ +L ++ G EV++P+++ E
Sbjct: 105 ADATAARIKAQGL--------TRIGLLGTRFTMEQDFYRGRLTDKFGIEVMVPNESDREV 156
Query: 254 -HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
H II L E +R R +Q L + +I+G E+ ++ + D
Sbjct: 157 IHRIIYQELCLGQIRPE-SRQQYREIMQRLSEQGAQGIILGCTEIALLVDQTD 208
>gi|421598069|ref|ZP_16041565.1| aspartate racemase [Bradyrhizobium sp. CCGE-LA001]
gi|404269822|gb|EJZ34006.1| aspartate racemase [Bradyrhizobium sp. CCGE-LA001]
Length = 295
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 17/254 (6%)
Query: 79 LNQANTIGIIGGVSVSSTLNFLGKLVW-YSAKDAEECPPFVVCNDPALNEELFHASVHSL 137
L + +G++GG+ +T FL L A+ ++ PFV + P +++
Sbjct: 48 LGRRRPLGVVGGMGSLATAKFLESLARKRQAEKDQDHIPFVALSLPDISD---------- 97
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
++ + A + + + +LEQAG I +PC+ +H W G++ SI + V E
Sbjct: 98 --RSQAISEGSDAPLRQIVARAHWLEQAGCGAIAIPCNTAHFWVGEIKRALSIDLIDVTE 155
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
AK++ + K + + +L T AT+ Y + + E + + ++ I
Sbjct: 156 ITAKKICDMKNDEIREFRSI---LLGTKATMQHSLYPQTNETSFGEGFVRCRKRLQREAI 212
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + + AR L I + A + +I+G E+ + D IDP+
Sbjct: 213 QIIADVKCGNTAKARAELEQLIHQIRSFAPDVIILGCSELSAI-SGDLADDDDVIDPISI 271
Query: 318 LARSTVTWARSNKK 331
LA + + W R +
Sbjct: 272 LAEACIDWWRKENE 285
>gi|392556287|ref|ZP_10303424.1| aspartate racemase [Pseudoalteromonas undina NCIMB 2128]
Length = 231
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 46/229 (20%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHA--SVHSLKSKT 141
TIG++GG+S ST ++ ALNE + ++ +HS K
Sbjct: 3 TIGMLGGMSWESTASYY----------------------KALNEGVKNSLGGLHSAKICM 40
Query: 142 VQLDHIRGAVSQN----------LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
V +D + Q+ L +E GA +++ + H +++ +IP
Sbjct: 41 VSVDFAKIEALQHQSDWQQTANILTEAAKSVEAGGADFLLICTNTMHKVADEIASNITIP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKA 250
LH+ + A++LK + R+G+L T T+ FY+E+L ++ EV++P+
Sbjct: 101 ILHIADATAEQLKHDNI--------TRVGLLGTQFTMEQNFYKERLTDKHNIEVLIPEPN 152
Query: 251 TME--HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
+ H +I + L D + + +RI I+ L + AVI+G E+
Sbjct: 153 ERKRVHEVIYSQLCLGIIDDDSRADYIRI-IERLFAQGAQAVILGCTEI 200
>gi|229017533|ref|ZP_04174433.1| hypothetical protein bcere0030_20860 [Bacillus cereus AH1273]
gi|229023751|ref|ZP_04180240.1| hypothetical protein bcere0029_20840 [Bacillus cereus AH1272]
gi|228737548|gb|EEL88055.1| hypothetical protein bcere0029_20840 [Bacillus cereus AH1272]
gi|228743758|gb|EEL93860.1| hypothetical protein bcere0030_20860 [Bacillus cereus AH1273]
Length = 236
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 160 AFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRI 219
A LE+ GA I++ + H + SIP LH+ + AKE+K+ ++ +
Sbjct: 69 ASLEKGGADFIIVCTNTMHKVIKHIKNRISIPILHIADATAKEIKQQGIQS--------V 120
Query: 220 GVLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPT--IEALNHRDMEGARNL 274
G+L T T+ FY+ +++ +V++P D+ T+ +I + +N + +R
Sbjct: 121 GLLGTKYTMEQDFYKLRIEENDIKVIVPTEEDRETVNKIIYNELCLGKINQQ----SREY 176
Query: 275 LRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
+ ++ L+ R +I+G E+ ++ ++D L+
Sbjct: 177 FKSVMEDLVQRGAKGIILGCTEIGLLVKQEDSLV 210
>gi|334125455|ref|ZP_08499444.1| aspartate racemase [Enterobacter hormaechei ATCC 49162]
gi|333386918|gb|EGK58122.1| aspartate racemase [Enterobacter hormaechei ATCC 49162]
Length = 230
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 36/232 (15%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG++GG+S ST+ P+ + + + L SL +V
Sbjct: 2 KTIGLLGGMSWESTI------------------PYYRLINEGVKQRLGGLHSASLLLHSV 43
Query: 143 QLDHIRGAVS--------QNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH 194
I S Q L LE+AGA+ I++ + H + + CS+PFLH
Sbjct: 44 DFHEIEACQSGGEWDKAGQMLADAALGLERAGAQGILLCTNTMHKVASHIEDRCSLPFLH 103
Query: 195 VGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATME 253
+ + + ++ + R+ +L T T+ FY+ +L +Q G E ++PD+A
Sbjct: 104 IADATGRAIRATGM--------TRVALLGTRYTMEQDFYRGRLSSQFGIESLIPDEADRA 155
Query: 254 HVIIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD 304
+ + L E +R I+ L + VI G E+ ++P D
Sbjct: 156 RINQIIFDELCLGTFSETSRAWYVSVIEKLAQQGAEGVIFGCTEIGLLVPTD 207
>gi|294010916|ref|YP_003544376.1| putative aspartate/glutamate racemase [Sphingobium japonicum UT26S]
gi|390168030|ref|ZP_10220001.1| putative aspartate/glutamate racemase [Sphingobium indicum B90A]
gi|292674246|dbj|BAI95764.1| putative aspartate/glutamate racemase [Sphingobium japonicum UT26S]
gi|389589350|gb|EIM67374.1| putative aspartate/glutamate racemase [Sphingobium indicum B90A]
Length = 231
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 15/148 (10%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE GA +++ + H DV +P LH+ + A+ +K A ++G+
Sbjct: 71 LEAGGADLLLICTNTMHRMATDVQAAVDVPLLHIADPTAERIKAAGFS--------KVGL 122
Query: 222 LATDATLSAGFYQEKLQNQ-GFEVVLP---DKATMEHVIIPTIEALNHRDMEGARNLLRI 277
L T T+ FY+ +L +Q G V++P D+AT+ +I E + + + +R+ R
Sbjct: 123 LGTAFTMEHAFYKGRLADQHGLSVIIPNDEDRATVHRIIYE--ELVAGKVLPTSRDAYRA 180
Query: 278 GIQLLLVRAVNAVIIGSDE-MQGVLPKD 304
I L+ AVI+G E M V P+D
Sbjct: 181 IIARLVEDGAQAVILGCTEIMLLVRPED 208
>gi|452994003|emb|CCQ94473.1| putative racemase [Clostridium ultunense Esp]
Length = 232
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 25/248 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S ST+ + L + K E+ F + EL SV + + +
Sbjct: 2 KTIGLIGGMSWESTMEYYRIL---NQKVKEKLGGF-------HSAELVLYSVDFEEIERL 51
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
Q + ++++ + +E+ GA +++ + H ++ + IPFLH+ + A
Sbjct: 52 QHEGDWESLTKLMVEAAKRVERGGADFLLLCTNTMHKMADEMEKAIQIPFLHIADATAGR 111
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKL-QNQGFEVVLP---DKATMEHVIIP 258
+K A LK ++G+L T T+ FY+ +L + G EV++P ++ + HVI
Sbjct: 112 IKNAGLK--------KVGLLGTRFTMEQDFYKGRLIKKHGLEVIVPYDEEREMIHHVIYH 163
Query: 259 TIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDAL 318
E + ++ I+ L+ + +I+G E+ G+L K + + D
Sbjct: 164 --ELCLGEICDSSKEAYLATIKRLVEQGAEGIILGCTEI-GLLIKQEDVSVPIFDTTLIH 220
Query: 319 ARSTVTWA 326
A + V +A
Sbjct: 221 AEAAVEYA 228
>gi|389685470|ref|ZP_10176794.1| putative aspartate racemase [Pseudomonas chlororaphis O6]
gi|388551123|gb|EIM14392.1| putative aspartate racemase [Pseudomonas chlororaphis O6]
Length = 489
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 83/173 (47%), Gaps = 19/173 (10%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECP-PFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GI+GGV ++T++F+ K+V ++ D ++ VV +P + + ++ +
Sbjct: 254 LGIVGGVGPAATVDFMAKVVRHTPADRDQDHIRMVVEQNPQIPD----------RTANLL 303
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
D ++ KR LE AGA I +PC+ +HA+ + +P ++ + E
Sbjct: 304 FDQADPTMAMYATCKR--LESAGANAIAIPCNTAHAFVERIQPYLQVPIVN----MLNET 357
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
EA ++ + G G IG+LAT T+ + Y E + G ++ P E V+
Sbjct: 358 IEAIVE--QYGPGKPIGLLATSGTVQSRVYHEAARLAGLSLLTPGFDYQELVM 408
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 31/174 (17%)
Query: 82 ANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
A+ +GI+GG+ + + KLV A V D LF H K
Sbjct: 14 ASRLGIVGGLGSLAGGDLFFKLVKSRA----------VLADQGRYHFLFEQ--HPFKDLL 61
Query: 142 VQLDHIRGAVSQNLRHKRAFL-------EQAGARCIVMPCHISHAWHGDVSEGCSIPFLH 194
+ L+ N+ ++ ++ E +G I++PC SH + ++ + IP L
Sbjct: 62 LPLER-----DANMTSRKFYVFQVCQSFEDSGVDAIMLPCFASHTFREEIQQELGIPILD 116
Query: 195 VGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
+ ++ ++ L+P G +GVLA+D AG + E+ F++V P+
Sbjct: 117 MMAALSAHIRHV-LEP-----GTVLGVLASDYVRHAGLF-ERYLGADFQLVYPE 163
>gi|146312927|ref|YP_001178001.1| racemase [Enterobacter sp. 638]
gi|145319803|gb|ABP61950.1| aspartate racemase [Enterobacter sp. 638]
Length = 230
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 96/233 (41%), Gaps = 36/233 (15%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL--FHAS---VHSL 137
TIG+IGG+S ST+ P+ + + + L H++ +HS+
Sbjct: 2 KTIGLIGGMSWESTI------------------PYYRLINEGIKQRLGGLHSASLLLHSV 43
Query: 138 KSKTVQLDHIRGA---VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH 194
++ G L LE+AGA+ I++ + H + CS+PFLH
Sbjct: 44 DFHEIEACQASGEWDKAGDMLAQAALGLERAGAQGILLCTNTMHKVASHIETRCSLPFLH 103
Query: 195 VGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATME 253
+ + + + ++ R+ +L T T+ FY+ +L+ Q G E ++PD+A
Sbjct: 104 IADATGRAIAATGMQ--------RVALLGTRYTMEQDFYRGRLETQFGIESIVPDEADRA 155
Query: 254 HVIIPTIEALNHRDMEGARNLLRIG-IQLLLVRAVNAVIIGSDEMQGVLPKDD 305
+ E L A +G I L + VI G E+ ++P ++
Sbjct: 156 RINQIIFEELCLGTFSDASRHYYLGVIDKLAKQGAEGVIFGCTEIGLLVPGEE 208
>gi|385839832|ref|YP_005863156.1| Aspartate racemase [Lactobacillus salivarius CECT 5713]
gi|300213953|gb|ADJ78369.1| Aspartate racemase [Lactobacillus salivarius CECT 5713]
Length = 224
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/139 (20%), Positives = 66/139 (47%), Gaps = 8/139 (5%)
Query: 161 FLEQAGAR--CIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVR 218
F +QA + +PC+ +H ++ ++ +P LH+ +++K+ + + R
Sbjct: 56 FKQQASLKPDFFTLPCNTAHYFYDELQAAVDVPVLHMPRLAVEQIKK------DYPNAKR 109
Query: 219 IGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIG 278
+G++AT+ TL G Y +++ + G+E+V P + + + +D + +
Sbjct: 110 VGIVATNGTLHDGVYDKEILDAGYELVKPTAEIQAKTMELIYDDIKEKDYVDGKLFYELV 169
Query: 279 IQLLLVRAVNAVIIGSDEM 297
++ +AVI+G E+
Sbjct: 170 EDMVKDEKCDAVILGCTEL 188
>gi|423584720|ref|ZP_17560807.1| aspartate racemase [Bacillus cereus VD045]
gi|401235946|gb|EJR42413.1| aspartate racemase [Bacillus cereus VD045]
Length = 224
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVARCQTIYGAKYDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE G I MPC+ +H + ++ SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGVSFIAMPCNTAHLYFEELQRSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHVI 256
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K TM + I
Sbjct: 106 ETLQSIPE---------NTKRVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQI 156
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I I++ ++E AR L + + L V+ II ++ V ++ +D
Sbjct: 157 ITYIKS---GEVEKARKLWS-ALVVQLKDEVDTAIIACTDLNVVASEN------FVDSSQ 206
Query: 317 ALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 207 CLAKAVVRMYLSNIK 221
>gi|358449146|ref|ZP_09159636.1| aspartate racemase [Marinobacter manganoxydans MnI7-9]
gi|357226563|gb|EHJ05038.1| aspartate racemase [Marinobacter manganoxydans MnI7-9]
Length = 231
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L++AGA +V+ + H ++ + IP LH+ + A+ LK + R+G+
Sbjct: 71 LQRAGADFLVIGTNTMHKVAPEIEQAIEIPLLHIADATAQVLKNDGIN--------RVGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDME-GARNLLRIGIQ 280
L T T+ FY+++L+ G +V+ PD+ + V E L +++ +R++ +
Sbjct: 123 LGTRFTMEQAFYRDRLEAAGIDVLTPDEIQRDEVHRVIYEELCLGEIKPDSRDIYLDIVS 182
Query: 281 LLLVRAVNAVIIGSDEMQGVLPK 303
L R AVI+G E+ G+L K
Sbjct: 183 SLSERGAQAVILGCTEI-GLLIK 204
>gi|326387882|ref|ZP_08209488.1| aspartate racemase [Novosphingobium nitrogenifigens DSM 19370]
gi|326207928|gb|EGD58739.1| aspartate racemase [Novosphingobium nitrogenifigens DSM 19370]
Length = 230
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 21/228 (9%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
T+G+IGG+S S+ + +++ +DA P + L S + + +
Sbjct: 2 KTLGLIGGMSWESSAEYY-RIINQGVRDA---------LGPTHSARLLLWSFDFAEIEAL 51
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
Q A++ + LE AGA +++ + H ++ ++P LH+ +
Sbjct: 52 QHACDWDALASRMVDAARRLETAGAEALLICTNTMHRCADLIAANVAVPLLHIADPTGAA 111
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKL-QNQGFEVVLPDKATMEHVIIPTIE 261
++ A ++ R+G+L T T+ FY+E+L + G +V++P+ A + V E
Sbjct: 112 VRAAGIE--------RVGLLGTRFTMEQAFYRERLAERHGLDVIVPEDADRQIVHRVIYE 163
Query: 262 ALNHRDME-GARNLLRIGIQLLLVRAVNAVIIGSDE-MQGVLPKDDPL 307
L +E +R R + L R +I+G E M V P+D P+
Sbjct: 164 ELVAGRIEPRSREAYRGALARLAERGAQGIILGCTEIMLLVRPEDSPV 211
>gi|167637972|ref|ZP_02396250.1| aspartate racemase family protein [Bacillus anthracis str. A0193]
gi|177651115|ref|ZP_02933946.1| aspartate racemase family protein [Bacillus anthracis str. A0174]
gi|254736866|ref|ZP_05194572.1| aspartate racemase family protein [Bacillus anthracis str. Western
North America USA6153]
gi|167513789|gb|EDR89157.1| aspartate racemase family protein [Bacillus anthracis str. A0193]
gi|172082941|gb|EDT68003.1| aspartate racemase family protein [Bacillus anthracis str. A0174]
Length = 224
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I M C+ +H + ++ + SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGAGFIAMSCNTAHLYFEELQQSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
K + E + R+ +L T+AT+ AG YQ+ + + E + ++ + I
Sbjct: 106 ETLKAIPE---------TAKRVALLETEATVQAGIYQDGIAKRNIEYIHYEQ--WQESIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L V+ II ++ V +D +D
Sbjct: 155 QIITYIKSGEVEEARELWS-ALVLQLKDEVDTAIIACTDLNVVASED------FVDSTQC 207
Query: 318 LARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 208 LAKAVVRMYLSNTK 221
>gi|423449345|ref|ZP_17426224.1| aspartate racemase [Bacillus cereus BAG5O-1]
gi|423463569|ref|ZP_17440337.1| aspartate racemase [Bacillus cereus BAG6O-1]
gi|423541815|ref|ZP_17518206.1| aspartate racemase [Bacillus cereus HuB4-10]
gi|423622160|ref|ZP_17597938.1| aspartate racemase [Bacillus cereus VD148]
gi|401128232|gb|EJQ35931.1| aspartate racemase [Bacillus cereus BAG5O-1]
gi|401169635|gb|EJQ76879.1| aspartate racemase [Bacillus cereus HuB4-10]
gi|401262258|gb|EJR68402.1| aspartate racemase [Bacillus cereus VD148]
gi|402421770|gb|EJV54018.1| aspartate racemase [Bacillus cereus BAG6O-1]
Length = 224
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDIDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE AG I +PC+ +H + ++ SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESAGVDFIAIPCNTAHLYFEELQHSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K + +I
Sbjct: 106 ETLRAIPE---------TVKRVALLATEATVQAGIYQDGIAKRNIEYLHNEK--WQEMIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L ++ II ++ V +D +D
Sbjct: 155 QIITCIKSGEIEEARKLWS-ALVLQLKDEIDTAIIACTDLNVVASED------FVDSAQC 207
Query: 318 LARSTVTWARSNKK 331
LA + V SN K
Sbjct: 208 LAEAVVWMYLSNTK 221
>gi|346312874|ref|ZP_08854409.1| hypothetical protein HMPREF9022_00066 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345906025|gb|EGX75759.1| hypothetical protein HMPREF9022_00066 [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 236
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 96 TLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS--KTVQLDHIRGAVSQ 153
T+ +G++ W S P + + N+ + +L +HS K +V+ D I S+
Sbjct: 3 TIGLIGEMSWEST-----IPYYQIINE-GVKAQL--GGLHSAKIILHSVEFDEIEKCQSR 54
Query: 154 N--------LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKE 205
L LE AGA I++ + H ++ IP +H+ + A+EL
Sbjct: 55 GDWKKSGEILGKAAQGLEGAGADFILICTNTMHKVAPQIASMIHIPIIHIADATAEELLN 114
Query: 206 AKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME---HVIIPTIEA 262
+ R+G+L T T++ FY++KL +G EV++P+ +E H+I E
Sbjct: 115 HNIH--------RVGLLGTKYTMTQDFYKQKLVERGIEVIVPEATEIEVINHIIFH--EL 164
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
+ + +R + I+ + R VI+G E+ ++ + D
Sbjct: 165 CVGQIKKDSRKKFQSIIERMKSRGAEGVILGCTEIGLLIHRSD 207
>gi|229163751|ref|ZP_04291696.1| amino-acid racemase [Bacillus cereus R309803]
gi|228619718|gb|EEK76599.1| amino-acid racemase [Bacillus cereus R309803]
Length = 224
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 108/255 (42%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLVW-----YSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTVYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE G I MPC+ +H + ++ SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGVEFIAMPCNTAHLYFEELQRSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHVI 256
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K TM + I
Sbjct: 106 ETLQAIPE---------NTKRVALLATEATVQAGIYQDGIAKRNIEYIHHEKWQTMINQI 156
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I I++ ++E AR L + L L V+ II ++ V +D +D
Sbjct: 157 IIYIKS---GEVEEARKLWSTLV-LQLKDEVDTAIIACTDLNVVANED------FVDSGQ 206
Query: 317 ALARSTVTWARSNKK 331
LA + V SN K
Sbjct: 207 CLAEAVVRMYLSNIK 221
>gi|159185592|ref|NP_357525.2| aspartate racemase [Agrobacterium fabrum str. C58]
gi|159140726|gb|AAK90310.2| aspartate racemase [Agrobacterium fabrum str. C58]
Length = 230
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 18/166 (10%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIGI+GG+S +ST + KL + + P EL S+ K +T+
Sbjct: 2 KTIGILGGMSAASTQIYYRKLCEITRD------RLGGLHSP----ELLIRSLDFAKIETL 51
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
Q GA + L + L++ GA I++ + H D+ EG IP LH+ + A
Sbjct: 52 QARGEWGAAAAILNAEAKALQRGGADFILLATNTMHKLARDMMEGVDIPLLHIADATADR 111
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
+ A L R G++AT T+ FY+++L VLPD
Sbjct: 112 ILSAGLS--------RPGLIATAFTMEQSFYKDRLVAASLHPVLPD 149
>gi|323350873|ref|ZP_08086531.1| aspartate racemase [Streptococcus sanguinis VMC66]
gi|322122855|gb|EFX94561.1| aspartate racemase [Streptococcus sanguinis VMC66]
Length = 230
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 32/180 (17%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASVHSLKSK 140
TIG+IGG+S ST ++ + + N+ E L A +
Sbjct: 2 KTIGLIGGMSWESTTSY-----------------YQIINETIKKELGGLHSAKILLYSVD 44
Query: 141 TVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+++H + Q L LEQAGA IV+ + H + E +IP LH+
Sbjct: 45 FAEIEHYQAVGDWEKSGQLLADVAQRLEQAGADFIVICTNTMHKVAPQIQEQITIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ A+ L ++ ++G+L T T++ FY+EKL G EV++PD+A + V
Sbjct: 105 AQATAQALLADGIQ--------KVGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEV 156
>gi|423438197|ref|ZP_17415178.1| aspartate racemase [Bacillus cereus BAG4X12-1]
gi|401118577|gb|EJQ26407.1| aspartate racemase [Bacillus cereus BAG4X12-1]
Length = 224
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 107/254 (42%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLVW-----YSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVTGCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYLEELQRSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ + E +K R+ +LAT+AT+ + YQ+ + + E + +K + I
Sbjct: 106 ETLQAIPE-NIK--------RVALLATEATVQSRIYQDGITKRNIEYIHHEK--WQESIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L V+ VII ++ V +D +D
Sbjct: 155 QIITCIKSGEIEEARELWN-ALVLQLREEVDTVIIACTDLNVVASED------FVDSSQC 207
Query: 318 LARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 208 LAKAVVRMYLSNIK 221
>gi|359411929|ref|ZP_09204394.1| aspartate racemase [Clostridium sp. DL-VIII]
gi|357170813|gb|EHI98987.1| aspartate racemase [Clostridium sp. DL-VIII]
Length = 231
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 43/188 (22%)
Query: 84 TIGIIGGVSVSSTLNF-----------LGKLVWYSAKDAEECPPFVVCNDPALNEELFHA 132
TIG+IGG+S STL++ LGKL +SAK C + V D E L H
Sbjct: 3 TIGLIGGMSFESTLDYYRIINETMRLKLGKL--HSAK----CILYSV--DFEKIEVLQH- 53
Query: 133 SVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
++K +L I +++ L++ +GA IV+ + H D+ E I
Sbjct: 54 -----ENKWDELTCIMIDIAKKLKN-------SGADFIVICTNTMHKMAKDIEEKAQIKV 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQ-NQGFEVVLPDKAT 251
LH+ E +E+ ++K+K ++G+L T T+ FY++ L+ N +V++P +
Sbjct: 102 LHIAEATGEEIIKSKIK--------KVGLLGTSFTMEQDFYKKVLKDNFNIDVIIPSREE 153
Query: 252 ME--HVII 257
E H II
Sbjct: 154 REIIHKII 161
>gi|291520435|emb|CBK75656.1| aspartate racemase [Butyrivibrio fibrisolvens 16/4]
Length = 239
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GIIGG+ +T F+ +++ + AK +E ++ N P++ + + S +S +
Sbjct: 5 LGIIGGLGPMATAYFMRRIIELTDAKTDQENIEMIIYNCPSIPDRTGYILGESSESPLPK 64
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
+ + + LE+ I MPC +H +H +++ IP V+ +
Sbjct: 65 ITELANS-----------LERQNVDYIAMPCITAHFFHDQLADSVMIP-------VSNGI 106
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI------I 257
KEA E G ++G++ATD T S + ++ + + PD A + V+ +
Sbjct: 107 KEAAQYLSERGIS-KVGIMATDGTASMHLFDSVFKDYDIKCIYPDAAGQKAVMSIIYDDV 165
Query: 258 PTIEALNHRDMEGARN-LLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
+ +N E +N LL G Q+ VI+G E+ ++ +D + +D +D
Sbjct: 166 KAGQPVNMDAFEQVKNQLLDAGAQV--------VILGCTELS-IVKRDYEVGANVLDIVD 216
Query: 317 ALARSTV 323
LA V
Sbjct: 217 VLAADCV 223
>gi|419780023|ref|ZP_14305874.1| aspartate racemase [Streptococcus oralis SK100]
gi|383185653|gb|EIC78148.1| aspartate racemase [Streptococcus oralis SK100]
Length = 230
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 32/180 (17%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASVHSLKSK 140
TIG+IGG+S ST ++ + + N+ E L A +
Sbjct: 2 KTIGLIGGMSWESTTSY-----------------YQIINETIKKELGGLHSAKILLYSVD 44
Query: 141 TVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+++H + Q L LEQAGA IV+ + H + E +IP LH+
Sbjct: 45 FAEIEHYQAVGDWEKSGQLLADIAQRLEQAGADFIVICTNTMHKVAPQIQEKITIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ A+ L ++ ++G+L T T++ FY+EKL G EV++PD+A + V
Sbjct: 105 AQATAQALLADGIQ--------KVGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEV 156
>gi|329119082|ref|ZP_08247774.1| aspartate racemase [Neisseria bacilliformis ATCC BAA-1200]
gi|327464821|gb|EGF11114.1| aspartate racemase [Neisseria bacilliformis ATCC BAA-1200]
Length = 229
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 99/227 (43%), Gaps = 22/227 (9%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST+ ++Y A + E + N A ++ SV + +Q
Sbjct: 3 TIGIIGGMSPESTV------LYYQAIN-RETNRRLGGNRSA---DIVMHSVDFEEIVRLQ 52
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
A L A LE AGA +++ + H + IP LH+ + A +
Sbjct: 53 KSGDWAAAGCVLASSAAKLETAGADLLLLATNTMHKVAPAIEAAVKIPLLHIVDATAAAI 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME--HVIIPTIE 261
K+ L +G+L T T+S GFY E++ QG + ++PD + H II
Sbjct: 113 KKQGLSA--------VGLLGTRFTMSDGFYTERMAAQGVQTIVPDDEEQDEIHRIIFEEL 164
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL-PKDDPL 307
LN E A + ++L A VI+G E+ ++ K+ PL
Sbjct: 165 CLNQIKPESAAYFQHVIVRLKDAGA-QGVILGCTEICLIVNEKNSPL 210
>gi|408790046|ref|ZP_11201679.1| Aspartate racemase [Lactobacillus florum 2F]
gi|408520620|gb|EKK20655.1| Aspartate racemase [Lactobacillus florum 2F]
Length = 238
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Query: 172 MPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAG 231
+PC+ +H ++ D+ E ++P LH+ +K + S RIG++AT TL
Sbjct: 82 LPCNTAHYFYQDLQELTTVPILHMPRLAVASIKT------KFPSARRIGLVATQGTLHDR 135
Query: 232 FYQEKLQNQGFEVVLPDKA----TMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAV 287
Y+++L G++ V+P TME +I ++ N D +LR Q+++ +
Sbjct: 136 IYEKELVQAGYQFVMPSPEVAHDTME-LIYAGVKEQNQVDPNLYHKILR---QMIVTQHC 191
Query: 288 NAVIIGSDEM 297
+ V++G E+
Sbjct: 192 DVVVLGCTEL 201
>gi|384180174|ref|YP_005565936.1| aspartate racemase family protein [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324326258|gb|ADY21518.1| aspartate racemase family protein [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 232
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 108/261 (41%), Gaps = 46/261 (17%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKS-- 139
TIG+IGG+S ST + +NEE+ +HS K
Sbjct: 3 TIGLIGGMSWESTAEYY----------------------RIINEEIKSRLGGLHSAKCLI 40
Query: 140 KTVQLDHIRG--------AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
+V + I G + + L + L+ GA I++ + H + E IP
Sbjct: 41 NSVDFEEIEGFQSSGDWDSAGEILGNAAYSLQMGGADFIIICTNTMHKVIEKIKENIHIP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ + AKE+K ++ +G+L T T+ FY+ +++ +V++P +
Sbjct: 101 VLHIADATAKEMKRKGIQT--------VGLLGTKYTMEQDFYKSRIKENDIKVIVPLEKN 152
Query: 252 MEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK 309
E + +I T E + + +R + I+ L+ + +I+G E+ G+L K + +
Sbjct: 153 REKINEVIYT-ELCLGKIVSQSREYYKTVIEDLVQKGAQGIILGCTEI-GLLIKQEDVSI 210
Query: 310 KCIDPMDALARSTVTWARSNK 330
D A V +A N+
Sbjct: 211 PIFDTTHIHAVEAVHFALQNR 231
>gi|297193998|ref|ZP_06911396.1| aspartate racemase [Streptomyces pristinaespiralis ATCC 25486]
gi|297152054|gb|EFH31504.1| aspartate racemase [Streptomyces pristinaespiralis ATCC 25486]
Length = 229
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE AGA +++ + H G V +P LH+ + A+ +K L R+G+
Sbjct: 71 LEAAGADLLLICTNTMHKVAGQVEAAVRVPLLHLADATAEAVKARGL--------TRVGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPD---KATMEHVIIPTIEALNHRDMEGARNLLRIG 278
L T T+ FY+ +L G EV+ PD +A + VI + RD AR IG
Sbjct: 123 LGTAFTMEQDFYRARLAGHGLEVLTPDAEGRALVHRVIYDELCLGVVRDESRARYQDVIG 182
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKDD 305
L+ V++G E++ ++ DD
Sbjct: 183 --ELVAAGAEGVVLGCTEIELLIGPDD 207
>gi|384109348|ref|ZP_10010227.1| aspartate racemase [Treponema sp. JC4]
gi|383869125|gb|EID84745.1| aspartate racemase [Treponema sp. JC4]
Length = 229
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 39/236 (16%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL--FHAS---VHSLK 138
TIG+IGG+S ST+ + + V N+ + +EL FH+S ++S+
Sbjct: 3 TIGLIGGMSWESTVTY-----------------YQVINET-IKKELGGFHSSKILMYSVD 44
Query: 139 SKTVQLDHIRGAVSQN---LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
++ + G N L LE+AGA IV+ + H + + ++P LH+
Sbjct: 45 FAELEKNMSEGNWDGNAKILAEASKRLEKAGADFIVIATNTMHKLVPQIEKKINVPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP---DKATM 252
+ A +K + ++ +L T T++ F +E+L G EV++P D A +
Sbjct: 105 ADATANVIKRDGRR--------KVALLGTRFTMTQDFIKERLVKAGLEVLVPCEEDIAIV 156
Query: 253 EHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
+ VI E + ++ +R ++ I+ + VI+G E+ ++ + D +L
Sbjct: 157 DDVIFN--ELCLGKIIDSSREKYKLIIEKMKALGAEGVILGCTEIGMLISQKDSVL 210
>gi|423391500|ref|ZP_17368726.1| aspartate racemase [Bacillus cereus BAG1X1-3]
gi|401637333|gb|EJS55086.1| aspartate racemase [Bacillus cereus BAG1X1-3]
Length = 236
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 75/152 (49%), Gaps = 17/152 (11%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+ GA I++ + H + SIP LH+ + AKE+K+ ++ +G+
Sbjct: 71 LEKGGADFIIVCTNTMHKVIKHIKNRISIPILHIADATAKEIKQQGIQS--------VGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPT--IEALNHRDMEGARNLLR 276
L T T+ FY+ +++ +V++P D+ T+ +I + +N + +R +
Sbjct: 123 LGTKYTMEQDFYKLRIEENDIKVIVPTEEDRETVNKIIYNELCLGKINQQ----SREYFK 178
Query: 277 IGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
++ L+ R +I+G E+ ++ ++D L+
Sbjct: 179 SVMEDLVQRGAKGIILGCTEIGLLVKQEDSLV 210
>gi|423612937|ref|ZP_17588798.1| aspartate racemase [Bacillus cereus VD107]
gi|401243641|gb|EJR50009.1| aspartate racemase [Bacillus cereus VD107]
Length = 223
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 37/243 (15%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H++
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAQCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HAV 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE G I MPC+ +H + ++ SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGVDFIAMPCNTAHLYFKELQHSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
K + + + R+ +LAT AT+ AG YQ+ + + E + +K + +I
Sbjct: 106 ETLKAIPD---------NTKRVALLATQATVQAGIYQDGITKRDIEYIHNEK--WQEMIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L V+ II ++ V +D +C+ DA
Sbjct: 155 QVITCIKCGEVEEARKLWS-ALVLHLKNEVDTAIIACTDLNVVANEDFVDSSQCL--ADA 211
Query: 318 LAR 320
+ R
Sbjct: 212 VVR 214
>gi|229051548|ref|ZP_04195025.1| Aspartate racemase [Bacillus cereus AH676]
gi|228721790|gb|EEL73257.1| Aspartate racemase [Bacillus cereus AH676]
Length = 148
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 11/83 (13%)
Query: 178 HAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKL 237
H + +V + SIP LH+G+ AKE+ E +K RIG+L T T+ FY+ +L
Sbjct: 7 HLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGLLGTKQTMEQDFYKSRL 58
Query: 238 QNQGFEVVLP---DKATMEHVII 257
E ++P ++ + HVI+
Sbjct: 59 AKYNIETIIPNDEERTFIHHVIL 81
>gi|52424069|ref|YP_087206.1| RacX protein [Mannheimia succiniciproducens MBEL55E]
gi|52306121|gb|AAU36621.1| RacX protein [Mannheimia succiniciproducens MBEL55E]
Length = 252
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 155 LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAG 214
L + LEQAGA I++ + H + + S+PFLH+ + VA +K L
Sbjct: 86 LAEQAKLLEQAGADGILLATNTMHKVARPIIDNISVPFLHILDAVADSIKAKGLN----- 140
Query: 215 SGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
++ +L T T+S FY++ L +G V+PD+ T + +
Sbjct: 141 ---KVALLGTAFTMSDNFYRDGLIERGITPVVPDEETQKEI 178
>gi|358638016|dbj|BAL25313.1| aspartate racemase [Azoarcus sp. KH32C]
Length = 484
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 109/255 (42%), Gaps = 29/255 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IG++GGV ++T++F+ K+V + A+ +E VV +P + + H + T+
Sbjct: 249 IGVVGGVGPAATVDFVAKIVRNTEARRDQEHVKLVVEQNPQIPDRTEHL-IGDGPDPTI- 306
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
A+ + LE A A I +PC+ +HA+ + SIP +++ + + +
Sbjct: 307 ------ALYSTCKK----LEAADADIIAIPCNTAHAFVERIQPYLSIPVVNMLDETVEHI 356
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA----TMEHVIIPT 259
+ G +G+LAT T+ +G Y + +++PD A M + P
Sbjct: 357 RR------RFGGDTLVGLLATSGTVGSGVYHAAAKKAELRLLVPDDAHQALVMNAIYGPK 410
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK-----CIDP 314
+ E LR + L R +I+G E+ +L D + + +DP
Sbjct: 411 GAKAGFTEGECVGE-LRHALASLAERGAEVLILGCTELPLLLTADQAYVVQGRTVAVLDP 469
Query: 315 MDALARSTVTWARSN 329
+ LA+ V + N
Sbjct: 470 TEILAKRCVALSGRN 484
>gi|423400387|ref|ZP_17377560.1| aspartate racemase [Bacillus cereus BAG2X1-2]
gi|401655744|gb|EJS73273.1| aspartate racemase [Bacillus cereus BAG2X1-2]
Length = 222
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 35/227 (15%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAGCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIN---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE G I MPC+ +H + ++ SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGVEFIAMPCNTAHLYFEELQRSISIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K + +I
Sbjct: 106 ETLQAIPE---------TAKRVALLATEATIQAGIYQDGIAKRNIEYIHHEK--WQEMIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD 304
I + +++ AR L + L L V+ II ++ V +D
Sbjct: 155 QIITYIKSGEIKEARKLWN-ALILQLEDEVDTAIIACTDLNVVASED 200
>gi|374602894|ref|ZP_09675881.1| aspartate racemase family protein [Paenibacillus dendritiformis
C454]
gi|374391510|gb|EHQ62845.1| aspartate racemase family protein [Paenibacillus dendritiformis
C454]
Length = 230
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 44/233 (18%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKS-- 139
TIG+IGG+S ST + K+V NEE+ H +HS K
Sbjct: 3 TIGLIGGMSWESTAEYY-KIV---------------------NEEVKHRLGGLHSAKCLL 40
Query: 140 KTVQLDHI-------RGAVSQNLRHKRAF-LEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
+V + I R A + +L A LE+AGA IV+ + H + E IP
Sbjct: 41 YSVDFEEIERYQAEDRWAEAGSLLGDAAHSLERAGADFIVICTNTMHKVMEYIEEKIDIP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ + A ++ ++ + IG+L T T+ FY+ +L++ G +V+ P+
Sbjct: 101 TLHIADATANQINKSNIGT--------IGLLGTKYTMEQNFYKSRLESNGIKVLTPNPLE 152
Query: 252 MEHVIIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK 303
E V E L ++ + +R R I+ L+ +++G E+ G+L K
Sbjct: 153 REMVNKVIYEELCVGNIQQSSREYYRQVIKNLVDAGAEGIVLGCTEI-GLLVK 204
>gi|49478746|ref|YP_038797.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49330302|gb|AAT60948.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
Length = 224
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 41/252 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ + SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQQSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
K + E + R+ +LAT+AT+ +G YQ+ + + E + ++ + I
Sbjct: 106 ETLKAIPE---------NTKRVALLATEATVQSGIYQDGIAKRNIEYIHYEQ--WQESIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L V+ II ++ VL +D ID
Sbjct: 155 QIITYIKSGEVEEARELWS-ALVLQLKDEVDTAIIACTDL-NVLASED-----FIDSSQC 207
Query: 318 LARSTVTWARSN 329
LA++ V N
Sbjct: 208 LAKAVVRMYVEN 219
>gi|398857040|ref|ZP_10612744.1| aspartate racemase [Pseudomonas sp. GM79]
gi|398241596|gb|EJN27245.1| aspartate racemase [Pseudomonas sp. GM79]
Length = 230
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 22/249 (8%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + +L+ +D P + +L SV +
Sbjct: 2 RTIGLIGGMSWESSAEYY-RLINQQVRDR---------LGPLRSAKLLMYSVDFGPLEQA 51
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
Q ++ L L+ GA C+V+ + H G + IPFLH+ +
Sbjct: 52 QHAGRWDDAAEILVDAARRLQAGGAECVVLCTNTMHKVAGQIQVAIDIPFLHIAD----- 106
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP--DKATMEHVIIPTI 260
A L+AG+ +R+G+L T T+ F + +L +G V++P D+ H II
Sbjct: 107 --PAGQAALDAGA-LRVGLLGTAFTMEQDFIKTRLTAKGLTVLVPEADERLAVHRIIYD- 162
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALAR 320
E E +R + + I+ L R A+I+G E+ G+L K + +D + A+
Sbjct: 163 ELCVGVISEASRQVYQRVIESLTERGAQAIILGCTEI-GLLIKPEHSALPLLDTTELHAQ 221
Query: 321 STVTWARSN 329
+ V +A +
Sbjct: 222 AAVAFALGD 230
>gi|218663207|ref|ZP_03519137.1| aspartate racemase [Rhizobium etli IE4771]
Length = 261
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 30/253 (11%)
Query: 80 NQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPAL-NEELFHASVHSLK 138
+ TIG+IGG+S S+ V+Y + V L + EL SV+ +
Sbjct: 21 EEMKTIGLIGGMSFESSA------VYYRLVN-----EMVRARRGGLASAELILHSVNFEE 69
Query: 139 SKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
+Q S+ L L+ AGA CI++ + H V+ S+P +H+ +
Sbjct: 70 IVALQKAGDWAGASRRLGEVAERLQAAGAGCILICTNTMHLIADKVAAKISVPLIHIIDE 129
Query: 199 VAKELKEA-KLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA---TMEH 254
AK L A + +PL +LAT T+ GFY E++++ G ++++PD A T+
Sbjct: 130 TAKSLHAAGRKRPL---------LLATRYTMEHGFYAERMKSLGLDIMVPDAADRTTVHD 180
Query: 255 VIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL-PKDDPLLKKCID 313
+I + A RD +R L I + +++I+G E+ +L P PL D
Sbjct: 181 IIFNELCAGKVRD--SSREKLIDIIDRAVEHGADSIILGCTEICLILDPHRLPL--PGFD 236
Query: 314 PMDALARSTVTWA 326
AR+ V +A
Sbjct: 237 TTAIHARAAVDFA 249
>gi|52140751|ref|YP_086078.1| aspartate racemase [Bacillus cereus E33L]
gi|51974220|gb|AAU15770.1| aspartate racemase [Bacillus cereus E33L]
Length = 224
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 105/252 (41%), Gaps = 41/252 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQRSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
K + E + ++ +LAT+AT+ +G YQ+ + + E + ++ + I
Sbjct: 106 ETLKAIPE---------TAKKVALLATEATVQSGIYQDGIAKRNIEYIHYEQ--WQESIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L V+ VII ++ V +D +D
Sbjct: 155 QIITYIKSGEVEEARELWS-ALVLQLKDEVDTVIIACTDLNVVANED------FVDSSQC 207
Query: 318 LARSTVTWARSN 329
LA++ V N
Sbjct: 208 LAKAVVRMYVEN 219
>gi|241205465|ref|YP_002976561.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240859355|gb|ACS57022.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 239
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 18/170 (10%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEA-KLKPLEAGSGVRIG 220
L+ AGA CI++ + H V+E S+P +H+ + AK L A + +PL
Sbjct: 71 LQIAGAGCILICTNTMHLIADKVAEKISVPLIHIIDETAKSLHAAGRKRPL--------- 121
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPTIEALNHRDMEGARNLLRI 277
+LAT T+ GFY +++++ G ++++P D+ T+ +I E + ++ +R+ L
Sbjct: 122 LLATRYTMEHGFYSDRMKSLGLDIMVPDAGDRTTVHDIIFD--ELCAGKVLDSSRDKLMA 179
Query: 278 GIQLLLVRAVNAVIIGSDEMQGVL-PKDDPLLKKCIDPMDALARSTVTWA 326
I + +++I+G E+ +L P PL D AR+ V +A
Sbjct: 180 VISRAIDNGADSIILGCTEICLILDPNHLPL--PGFDTTAIHARAAVDFA 227
>gi|423446798|ref|ZP_17423677.1| aspartate racemase [Bacillus cereus BAG5O-1]
gi|423466101|ref|ZP_17442869.1| aspartate racemase [Bacillus cereus BAG6O-1]
gi|423539335|ref|ZP_17515726.1| aspartate racemase [Bacillus cereus HuB4-10]
gi|401131675|gb|EJQ39326.1| aspartate racemase [Bacillus cereus BAG5O-1]
gi|401175329|gb|EJQ82531.1| aspartate racemase [Bacillus cereus HuB4-10]
gi|402416295|gb|EJV48613.1| aspartate racemase [Bacillus cereus BAG6O-1]
Length = 232
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 46/261 (17%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKS-- 139
TIG+IGG+S ST + LNEE+ +HS K
Sbjct: 3 TIGLIGGMSWESTSEYY----------------------RILNEEIKSRLGGLHSAKCLI 40
Query: 140 KTVQLDHIR--------GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
+V + I + L + L++ GA I++ + H + E +IP
Sbjct: 41 NSVDFEEIERFQSNGDWDGAGEVLGNAAYSLQKGGADFIIICTNTMHKVVEKIKENINIP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ + AKE+K ++ IG+L T T+ FY+ +++ +V++P +
Sbjct: 101 VLHIADTTAKEIKRKGIQT--------IGLLGTKYTMEQDFYKSRIEENNIKVIVPVEKN 152
Query: 252 MEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK 309
E + II T E + +R + I+ L+ + +I+G E+ G+L K + +L
Sbjct: 153 REKLNEIIYT-ELCLGKITSQSREYYKRVIEELVQKGAQGIILGCTEI-GLLIKQEDVLV 210
Query: 310 KCIDPMDALARSTVTWARSNK 330
D A V + N+
Sbjct: 211 PIFDTTVIHAMEAVNVSLENR 231
>gi|261364665|ref|ZP_05977548.1| aspartate racemase [Neisseria mucosa ATCC 25996]
gi|288567274|gb|EFC88834.1| aspartate racemase [Neisseria mucosa ATCC 25996]
Length = 230
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 86/216 (39%), Gaps = 21/216 (9%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST V Y E + N A ++ SV + +Q
Sbjct: 3 TIGIIGGMSPEST-------VLYYQIINRETNRRLGGNRSA---KILLDSVDFEEIVRLQ 52
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
A L LE GA +++ + H + + IP LHV + A +
Sbjct: 53 KSGDWAAAGNVLAQSARKLEAGGADFLLLATNTMHKVAPAIEQAAGIPLLHVVDATAAAI 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME--HVIIPTIE 261
K L +G+L T T+S GFY E++ +QG + + P A + H II
Sbjct: 113 KRQGLSA--------VGLLGTRFTMSDGFYTERMGSQGVQTITPTAAEQDEIHRIIFDEL 164
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
LN E AR + I L VI+G E+
Sbjct: 165 CLNRIRPESARYFYDV-IGRLKNEGAQGVILGCTEI 199
>gi|30264822|ref|NP_847199.1| aspartate racemase [Bacillus anthracis str. Ames]
gi|47530307|ref|YP_021656.1| aspartate racemase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187641|ref|YP_030894.1| aspartate racemase [Bacillus anthracis str. Sterne]
gi|65322123|ref|ZP_00395082.1| COG1794: Aspartate racemase [Bacillus anthracis str. A2012]
gi|165869772|ref|ZP_02214430.1| aspartate racemase family protein [Bacillus anthracis str. A0488]
gi|167633792|ref|ZP_02392115.1| aspartate racemase family protein [Bacillus anthracis str. A0442]
gi|170685960|ref|ZP_02877183.1| aspartate racemase family protein [Bacillus anthracis str. A0465]
gi|170705467|ref|ZP_02895931.1| aspartate racemase family protein [Bacillus anthracis str. A0389]
gi|190568295|ref|ZP_03021203.1| aspartate racemase family protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|227817547|ref|YP_002817556.1| aspartate racemase family protein [Bacillus anthracis str. CDC 684]
gi|229603579|ref|YP_002869030.1| aspartate racemase family protein [Bacillus anthracis str. A0248]
gi|254687563|ref|ZP_05151419.1| aspartate racemase family protein [Bacillus anthracis str.
CNEVA-9066]
gi|254725128|ref|ZP_05186911.1| aspartate racemase family protein [Bacillus anthracis str. A1055]
gi|254741901|ref|ZP_05199588.1| aspartate racemase family protein [Bacillus anthracis str. Kruger
B]
gi|254754501|ref|ZP_05206536.1| aspartate racemase family protein [Bacillus anthracis str. Vollum]
gi|254757334|ref|ZP_05209361.1| aspartate racemase family protein [Bacillus anthracis str.
Australia 94]
gi|386738656|ref|YP_006211837.1| Aspartate racemase family protein [Bacillus anthracis str. H9401]
gi|421508620|ref|ZP_15955532.1| aspartate racemase [Bacillus anthracis str. UR-1]
gi|421639843|ref|ZP_16080432.1| aspartate racemase [Bacillus anthracis str. BF1]
gi|30259497|gb|AAP28685.1| aspartate racemase family protein [Bacillus anthracis str. Ames]
gi|47505455|gb|AAT34131.1| aspartate racemase family protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49181568|gb|AAT56944.1| aspartate racemase family protein [Bacillus anthracis str. Sterne]
gi|164714601|gb|EDR20120.1| aspartate racemase family protein [Bacillus anthracis str. A0488]
gi|167530593|gb|EDR93295.1| aspartate racemase family protein [Bacillus anthracis str. A0442]
gi|170129592|gb|EDS98455.1| aspartate racemase family protein [Bacillus anthracis str. A0389]
gi|170670424|gb|EDT21164.1| aspartate racemase family protein [Bacillus anthracis str. A0465]
gi|190560551|gb|EDV14528.1| aspartate racemase family protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|227002401|gb|ACP12144.1| aspartate racemase family protein [Bacillus anthracis str. CDC 684]
gi|229267987|gb|ACQ49624.1| aspartate racemase family protein [Bacillus anthracis str. A0248]
gi|384388508|gb|AFH86169.1| Aspartate racemase family protein [Bacillus anthracis str. H9401]
gi|401821243|gb|EJT20401.1| aspartate racemase [Bacillus anthracis str. UR-1]
gi|403392931|gb|EJY90178.1| aspartate racemase [Bacillus anthracis str. BF1]
Length = 224
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I M C+ +H + ++ + SIP L++ +
Sbjct: 59 MKKAI----IEGAQK---------LESTGAGFIAMSCNTAHLYFEELQQSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
K + E + R+ +L T+AT+ AG YQ+ + + E + ++ + I
Sbjct: 106 ETLKAIPE---------TAKRVALLETEATVQAGIYQDGIAKRNIEYIHYEQ--WQESIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L V+ II ++ V +D +D
Sbjct: 155 QIITYIKSGEVEEARELWS-ALVLQLKDEVDTAIIACTDLNVVASED------FVDSAQC 207
Query: 318 LARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 208 LAKAVVRMYLSNTK 221
>gi|402557548|ref|YP_006598819.1| aspartate racemase [Bacillus cereus FRI-35]
gi|401798758|gb|AFQ12617.1| aspartate racemase [Bacillus cereus FRI-35]
Length = 232
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 107/266 (40%), Gaps = 56/266 (21%)
Query: 84 TIGIIGGVSVSSTLNF-----------LGKLVWYSAK------DAEECPPFVVCNDPALN 126
TIG+IGG+S ST + LG L +SAK D EE F D
Sbjct: 3 TIGLIGGMSWESTAEYYRIINEEIKKRLGGL--HSAKCIINSVDFEEIERFQSNGDWNGA 60
Query: 127 EELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSE 186
E+ + +SL+S AGA I++ + H + E
Sbjct: 61 GEVLGNAAYSLQS-------------------------AGADFIIICTNTMHKVVEKIKE 95
Query: 187 GCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVL 246
IP LH+ + AKE+K ++ +G+L T T+ FY+ +++ +V +
Sbjct: 96 NIHIPVLHIADATAKEMKRKGIQT--------VGLLGTKYTMEQDFYKSRIEENHIKVTV 147
Query: 247 PDKATMEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD 304
P K + + +I T L + + +R + I+ L+ +I+G E+ G+L K
Sbjct: 148 PSKTDRDKINEVIYTELCLG-KIVSQSREYYKRVIEELVQEGAQGIILGCTEI-GLLVKQ 205
Query: 305 DPLLKKCIDPMDALARSTVTWARSNK 330
+ + D A V +A N+
Sbjct: 206 EDVSVPIFDTTYIHAVEAVHFALQNR 231
>gi|402547528|ref|ZP_10844396.1| aspartate racemase [Campylobacter sp. FOBRC14]
gi|401016230|gb|EJP74998.1| aspartate racemase [Campylobacter sp. FOBRC14]
Length = 230
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 37/231 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
IG+IGG+S ST+ + +L+ + +NE L + + +V
Sbjct: 4 IGLIGGMSYESTIAYY-QLI-----------------NKKINERLGGLNSGEILLSSVNF 45
Query: 145 DHIR--------GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
+HI + L L++ GA I + + H + V S+P +H+
Sbjct: 46 EHIEECQRLDKWDEAGEILAAHARILQRGGADAIFICTNTMHKVYDAVQSAVSVPVVHIA 105
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
KELK + ++G+L T T+S FY+++L G EV+ P+ M+ V
Sbjct: 106 TATLKELKRCDID--------KVGLLGTIYTMSEPFYKDELMRGGVEVITPNADEMKLVN 157
Query: 257 IPTIEALNHRDMEGA--RNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
+ L H ++ A + L I + L A VI+G E+ ++ + D
Sbjct: 158 DVIFDELCHGEISPASKQKFLSIIVNLKACGA-KGVILGCTEIGLLVAQKD 207
>gi|294102242|ref|YP_003554100.1| aspartate racemase [Aminobacterium colombiense DSM 12261]
gi|293617222|gb|ADE57376.1| aspartate racemase [Aminobacterium colombiense DSM 12261]
Length = 228
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 111/246 (45%), Gaps = 27/246 (10%)
Query: 84 TIGIIGGVSVSSTLNFLGKL--VWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
+IGI+GG+S++ST+ + + ++Y P V+ +L+ + F + + +
Sbjct: 4 SIGILGGISLASTIQYYKTITDLYYERNKDYYYPEMVI---KSLDFQYF-TDLENERRTE 59
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+D+I + LE AGA +M + H+ V E +P + + E AK
Sbjct: 60 EYIDYIVKGIKS--------LESAGADFAIMAANSPHSVFDKVVEKVELPIISIVETTAK 111
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV-IIPTI 260
+ E LK ++ + T+ FYQ+ L+ EV+ P + + + I
Sbjct: 112 KAVELNLK--------KVLLTGIKYTMQGRFYQDGLEKYDIEVITPTENHQDEINSIIFQ 163
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALAR 320
E + +R E R+ + ++++ V VI+G E+ +L ++ L K +D + A+
Sbjct: 164 ELVINRFSEKTRSRM---LEIISSYNVEGVILGCTELPLLLNQEHSHL-KLLDTLTLHAK 219
Query: 321 STVTWA 326
+ + ++
Sbjct: 220 AALEFS 225
>gi|322376070|ref|ZP_08050580.1| putative aspartate racemase [Streptococcus sp. C300]
gi|321279020|gb|EFX56063.1| putative aspartate racemase [Streptococcus sp. C300]
Length = 230
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 107/256 (41%), Gaps = 42/256 (16%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLK---- 138
TIG+IGG+S ST ++ + + N+ + +EL +HS K
Sbjct: 2 KTIGLIGGMSWESTTSY-----------------YQIINE-IIKKEL--GGLHSAKILLY 41
Query: 139 -SKTVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+++H + Q L LEQAGA IV+ + H + E +IP
Sbjct: 42 SVDFAEIEHYQAVGDWEKSGQLLADVAQRLEQAGADFIVICTNTMHKVAPQIQEKITIPI 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
LH+ + A+ L ++ ++G+L T T++ FY+EKL G EV++PD+A +
Sbjct: 102 LHIAQATAQALLADGIQ--------KVGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGI 153
Query: 253 EHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK 310
V II L + + L I I L AVI+G E+ G+L K
Sbjct: 154 TEVNRIIYDELCLGNIKESSKQTYLAI-IDELKKAGAEAVILGCTEI-GLLVKQSDTDLP 211
Query: 311 CIDPMDALARSTVTWA 326
D A WA
Sbjct: 212 LYDTTVIHAEKAAEWA 227
>gi|423489925|ref|ZP_17466607.1| aspartate racemase [Bacillus cereus BtB2-4]
gi|423495648|ref|ZP_17472292.1| aspartate racemase [Bacillus cereus CER057]
gi|423497557|ref|ZP_17474174.1| aspartate racemase [Bacillus cereus CER074]
gi|401150141|gb|EJQ57604.1| aspartate racemase [Bacillus cereus CER057]
gi|401162488|gb|EJQ69844.1| aspartate racemase [Bacillus cereus CER074]
gi|402430244|gb|EJV62322.1| aspartate racemase [Bacillus cereus BtB2-4]
Length = 224
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPA---LNEELFHASVHS 136
IGI+ G+ ST F+ +V Y AK + P ++ + P ++ + HA++
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHAAM-- 59
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
K + I GA LE G I MPC+ +H + ++ +IP L++
Sbjct: 60 --KKAI----IEGAQK---------LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIV 104
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
+ K + E + R+ +LAT+AT+ A YQ+ + + E + ++ + +I
Sbjct: 105 DETLKAIPE---------NTKRVALLATEATVQASIYQDGITKRDIEYIHNEQ--WQEMI 153
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I + ++E R L + + L L V+ II ++ V+ +D +D
Sbjct: 154 NQIITCIKGGEIEETRKLWSLLV-LQLKDEVDTAIIACTDLNVVVSED------FVDSAQ 206
Query: 317 ALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 207 CLAKAVVRIYASNIK 221
>gi|229076262|ref|ZP_04209229.1| amino-acid racemase [Bacillus cereus Rock4-18]
gi|228706911|gb|EEL59117.1| amino-acid racemase [Bacillus cereus Rock4-18]
Length = 235
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 108/252 (42%), Gaps = 37/252 (14%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
IGI+ G+ ST F+ +V Y AK + P ++ + P
Sbjct: 13 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDIDFPHMMIYSCPT----------RFYMD 62
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+ + + ++ A+ + + LE AG I MPC+ +H + ++ SIP L++ +
Sbjct: 63 RPIDHEAMKKAIIEGAQK----LESAGVDFIAMPCNTAHLYFEELQHSLSIPILNIVDET 118
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPT 259
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K + +I
Sbjct: 119 LRAIPE---------TVKRVALLATEATVQAGIYQDGIAKRNIEYLHNEK--WQEMINQI 167
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALA 319
I + ++E AR L + L L ++ II ++ V ++ +D LA
Sbjct: 168 ITCIKSGEVEEARKLWS-ALVLQLKDEIDTAIIACTDLNVVASEN------FVDSAQCLA 220
Query: 320 RSTVTWARSNKK 331
+ V SN K
Sbjct: 221 EAVVWMYLSNTK 232
>gi|423545554|ref|ZP_17521912.1| aspartate racemase [Bacillus cereus HuB5-5]
gi|423624736|ref|ZP_17600514.1| aspartate racemase [Bacillus cereus VD148]
gi|401182356|gb|EJQ89493.1| aspartate racemase [Bacillus cereus HuB5-5]
gi|401256037|gb|EJR62250.1| aspartate racemase [Bacillus cereus VD148]
Length = 232
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 46/261 (17%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKS-- 139
TIG+IGG+S ST + LNEE+ +HS K
Sbjct: 3 TIGLIGGMSWESTSEYY----------------------RILNEEIKSRLGGLHSAKCLI 40
Query: 140 KTVQLDHIR--------GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
+V + I + L + L++ GA I++ + H + E +IP
Sbjct: 41 NSVDFEEIERFQSNGDWDGAGEVLGNAAYSLQKGGADFIIICTNTMHKVVEKIKENINIP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ + AKE+K ++ IG+L T T+ FY+ +++ +V++P +
Sbjct: 101 VLHIADTTAKEIKRKGIQT--------IGLLGTKYTMEQDFYKSRIEENNIKVIVPVEKN 152
Query: 252 MEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK 309
E + II T E + +R + I+ L+ + +I+G E+ G+L K + +L
Sbjct: 153 REKLNEIIYT-ELCLGKITSQSREYYKRVIEELVQKGAQGIILGCTEI-GLLIKQEDVLV 210
Query: 310 KCIDPMDALARSTVTWARSNK 330
D A V + N+
Sbjct: 211 PIFDTTVIHAMEAVNVSLGNR 231
>gi|424882375|ref|ZP_18306007.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WU95]
gi|392518738|gb|EIW43470.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WU95]
Length = 239
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 77/147 (52%), Gaps = 15/147 (10%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEA-KLKPLEAGSGVRIG 220
L+ AGA CI++ + H V+E S+P +H+ + AK L A + +PL
Sbjct: 71 LQIAGAGCILICTNTMHLIADKVAEKISVPLIHIIDETAKSLHAAGRKRPL--------- 121
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPTIEALNHRDMEGARNLLRI 277
+LAT T+ GFY +++++ G ++++P D+ T+ +I + A + ++ +R+ L
Sbjct: 122 LLATRYTMEHGFYSDRMKSLGVDIMVPNANDRTTVHDIIFNELCA--GKVLDSSRDKLMA 179
Query: 278 GIQLLLVRAVNAVIIGSDEMQGVLPKD 304
I + +++I+G E+ +L D
Sbjct: 180 VISRAVENGADSIILGCTEICLILDPD 206
>gi|340000550|ref|YP_004731434.1| hypothetical protein SBG_2620 [Salmonella bongori NCTC 12419]
gi|339513912|emb|CCC31671.1| conserved hypothetical protein [Salmonella bongori NCTC 12419]
Length = 235
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 42/234 (17%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL--FHAS---VHSL 137
TIG++GG+S ST+ P+ + + ++L H++ +HS+
Sbjct: 2 KTIGLLGGMSWESTI------------------PYYRLINEGIKQQLGGLHSASLLLHSV 43
Query: 138 KSKTVQLDHIRGA---VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH 194
++ RG + L L+QAGA IV+ + H + CS+PFLH
Sbjct: 44 DFHDIEECQRRGEWDNAGEILAQAVQGLQQAGAEGIVLCTNTMHKIAHLIESRCSLPFLH 103
Query: 195 VGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLP---DKA 250
+ + + + L+ R+ +L T T+ FY+ +L+ Q E V+P D+
Sbjct: 104 IADATGRAIARQGLR--------RVALLGTRYTMEQDFYRGRLEQQFAIETVVPEADDRV 155
Query: 251 TMEHVIIPTIEALNHRDMEGAR-NLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK 303
+ VI E + + +R LR+ I+ L + VI G E+ ++P+
Sbjct: 156 RINQVIFD--ELCQGQFTDASRCYYLRV-IEQLAAQGAQGVIFGCTEIGLLVPQ 206
>gi|405378832|ref|ZP_11032743.1| aspartate racemase [Rhizobium sp. CF142]
gi|397324642|gb|EJJ28996.1| aspartate racemase [Rhizobium sp. CF142]
Length = 240
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLK-PLEAGSGVRIG 220
L+ AGA C+++ + H +VS S+P +H+ + AK + EA K PL
Sbjct: 71 LQIAGAHCVLICTNTMHLIAPEVSSHISVPLIHIIDETAKTIHEAGCKRPL--------- 121
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKA--TMEHVIIPTIEALNHRDMEGARNLLRIG 278
+LAT T+ GFY ++++ G ++++P+ A T H II E + ++ +R L
Sbjct: 122 LLATRYTMEHGFYTDRMKGLGLDIMVPEAADRTTVHDIIFN-ELCAGKVLDSSRQKLMAV 180
Query: 279 IQLLLVRAVNAVIIGSDEMQGVL-PKDDPLLKKCIDPMDALARSTVTWA 326
I+ +++I+G E+ +L P PL D AR+ V +A
Sbjct: 181 IERARANGADSIILGCTEICLILNPDHLPLAG--FDTTAIHARAAVDFA 227
>gi|377832172|ref|ZP_09815136.1| aspartate racemase [Lactobacillus mucosae LM1]
gi|377554179|gb|EHT15894.1| aspartate racemase [Lactobacillus mucosae LM1]
Length = 238
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 170 IVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLS 229
V+ C+ +H + SIP L++ + E+K A R+GVLAT T++
Sbjct: 80 FVLICNTAHYAFDRLQAATSIPILNMLQETVNEIKNI------APHAKRVGVLATRGTIA 133
Query: 230 AGFYQEKLQNQGFEVVLPDKATM---EHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRA 286
+G Y +QN G+E V P A + E +I I+ H D + L+R I+ +
Sbjct: 134 SGLYDSYIQNAGYEEVKPTPAILDATEDLIYHDIKEAGHSDGKKFHELVRTMIE---DQK 190
Query: 287 VNAVIIGSDEM 297
+ VI+G E+
Sbjct: 191 CDVVILGCTEL 201
>gi|312142817|ref|YP_003994263.1| aspartate racemase [Halanaerobium hydrogeniformans]
gi|311903468|gb|ADQ13909.1| aspartate racemase [Halanaerobium hydrogeniformans]
Length = 231
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 28/229 (12%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEE---CPPFVVCNDPALNEELFHASVHSLKS 139
TI +IGG+S S+L + L + K+ E + D A E+L H L +
Sbjct: 2 KTIALIGGMSWESSLEYYRMLNQFVKKELGEPHSAEIIMYSVDFAEFEKLQHQGQWELLT 61
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
+ + I A+ LE+AG +++ + H +V +IP LH+ +
Sbjct: 62 EKM----IEIALK---------LEKAGGDILLICTNTMHKMAAEVEAAINIPLLHIADSA 108
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQ-NQGFEVVLPDKATME--HVI 256
+ +KE L ++ +L T T+ FY+++L+ N EV++P+ E H +
Sbjct: 109 GESIKEMGLN--------KVALLGTKFTMEEDFYKKRLKDNYQLEVLIPEAEEREIIHNV 160
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
I E ++ E +R + I+ L R V++G E+ ++ +D
Sbjct: 161 IYQ-ELISGIIKEQSRTKFKKIIEALKTRGAEGVVLGCTEIPLLIKDED 208
>gi|27383265|ref|NP_774794.1| aspartate racemase [Bradyrhizobium japonicum USDA 110]
gi|27356439|dbj|BAC53419.1| aspartate racemase [Bradyrhizobium japonicum USDA 110]
Length = 229
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 26/169 (15%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDA----EECPPFVVCNDPALNEELFHASVHSLK 138
TIG+IGG+S ST + KL+ +D P + D +E+ +A
Sbjct: 2 RTIGLIGGMSWESTALYY-KLINERVRDRMGKLHSAPLLMYSYDFQEIKEMQYAGRWQEA 60
Query: 139 SKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
+ ++ V+Q LE AGAR IV+ + H ++ +IPF+H+G+
Sbjct: 61 ASSL------AEVAQR-------LESAGARAIVLCTNTMHKLAPEIVAKLTIPFVHIGDS 107
Query: 199 VAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLP 247
A+ ++ + R+G+L T T+ FY ++L+ +V++P
Sbjct: 108 TAQRIRSKGYR--------RVGLLGTKFTMEEDFYIDRLRAHDLDVLVP 148
>gi|228967857|ref|ZP_04128869.1| amino-acid racemase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|402563734|ref|YP_006606458.1| aspartate racemase [Bacillus thuringiensis HD-771]
gi|423358157|ref|ZP_17335660.1| aspartate racemase [Bacillus cereus VD022]
gi|228791823|gb|EEM39413.1| amino-acid racemase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|401086650|gb|EJP94872.1| aspartate racemase [Bacillus cereus VD022]
gi|401792386|gb|AFQ18425.1| aspartate racemase [Bacillus thuringiensis HD-771]
Length = 224
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P +
Sbjct: 2 IGILAGMGPKSTGPFVDTVVARCQTIYGAKHDMDFPHMMIYSCPTPFYMDR--------- 52
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
+DH GA+ + + LE G I MPC+ +H + ++ SIP L++ +
Sbjct: 53 -----PIDH--GAMKKAIIDGAQKLESTGVSFIAMPCNTAHLYFEELQRSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ + E + R+ +LAT+AT+ A YQ+ + + E + +K + I
Sbjct: 106 ETLQAIPE---------NTKRVALLATEATVQARIYQDGIAKRNIEYIHHEK--WQESIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I ++E AR L + L L ++ II ++ V +D +D
Sbjct: 155 QIITCSKSGEIEEARELWNTLV-LQLRDEIDTAIIACTDLNVVASED------FVDSSQC 207
Query: 318 LARSTVTWARSNKK 331
LA + V SNKK
Sbjct: 208 LADAVVEMYLSNKK 221
>gi|423597948|ref|ZP_17573948.1| aspartate racemase [Bacillus cereus VD078]
gi|401238150|gb|EJR44592.1| aspartate racemase [Bacillus cereus VD078]
Length = 224
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPA---LNEELFHASVHS 136
IGI+ G+ ST F+ +V Y AK + P ++ + P ++ + HA++
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHAAM-- 59
Query: 137 LKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVG 196
K + I GA LE G I MPC+ +H + ++ +IP L++
Sbjct: 60 --KKAI----IEGAQK---------LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIV 104
Query: 197 ECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVI 256
+ K + E + R+ +LAT+AT+ A YQ + + E + ++ + +I
Sbjct: 105 DETLKAIPE---------NTKRVALLATEATVQASIYQGGITKRDIEYIHNEQ--WQEMI 153
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I + ++E AR L + + L L V+ II ++ V+ +D +D
Sbjct: 154 NQIITCIKGGEIEEARKLWSLLV-LQLKDEVDTAIIACTDLNVVVSED------FVDSAQ 206
Query: 317 ALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 207 CLAKAVVRIYASNIK 221
>gi|294669115|ref|ZP_06734199.1| aspartate racemase [Neisseria elongata subsp. glycolytica ATCC
29315]
gi|291308929|gb|EFE50172.1| aspartate racemase [Neisseria elongata subsp. glycolytica ATCC
29315]
Length = 230
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 86/216 (39%), Gaps = 21/216 (9%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST V Y E + N A ++ SV + +Q
Sbjct: 3 TIGIIGGMSPEST-------VLYYQIINRETNRRLGGNRSA---KILLDSVDFEEIVRLQ 52
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
A L LE GA +++ + H + + IP LHV + A +
Sbjct: 53 KSGDWAAAGNVLAQSARKLEAGGADFLLLATNTMHKVAPAIEQAAGIPLLHVVDATAAAI 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME--HVIIPTIE 261
K L +G+L T T+S GFY E++ +QG + + P A + H II
Sbjct: 113 KRQGLSA--------VGLLGTRFTMSDGFYTERMGSQGVQTITPTAAEQDEIHRIIFDEL 164
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
LN E AR + I L VI+G E+
Sbjct: 165 CLNRIRPESARYFYDV-IGRLKNEGAQGVILGCTEI 199
>gi|266623105|ref|ZP_06116040.1| aspartate racemase [Clostridium hathewayi DSM 13479]
gi|288865142|gb|EFC97440.1| aspartate racemase [Clostridium hathewayi DSM 13479]
Length = 235
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 34/181 (18%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL--FHAS---VHSL 137
TIG+IGG+S ST+ + + V N+ A+ E L H++ ++S+
Sbjct: 2 KTIGLIGGMSWESTVTY-----------------YQVINE-AVKERLGGLHSARCILYSV 43
Query: 138 KSKTVQLDHIRGAVSQN---LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLH 194
+ ++ G ++ L L++AGA IV+ + H + IP LH
Sbjct: 44 DFQEIEECQAAGEWEKSGKILGEAAESLQKAGADFIVICTNTMHKVVPQIQSKIHIPILH 103
Query: 195 VGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEH 254
+ E A LK ++ R+G+L T T++ FY+ KL G EV++P+ + +E
Sbjct: 104 IAEAAALRLKAERMD--------RVGLLGTKYTMTQDFYKGKLAEYGVEVLIPEASEIET 155
Query: 255 V 255
V
Sbjct: 156 V 156
>gi|85703003|ref|ZP_01034107.1| aspartate racemase [Roseovarius sp. 217]
gi|85671931|gb|EAQ26788.1| aspartate racemase [Roseovarius sp. 217]
Length = 233
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 21/176 (11%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVW-YSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
T+GI+GG+ +T+ + KL+ A+D + P +V +P + + +L T
Sbjct: 2 KTVGILGGMGPEATILLMQKLLAAVPARDDSDHIPLIVHQNPQVPSR-----IKALIEGT 56
Query: 142 VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAK 201
+ L LE AGA+ + MPC+ +H + V S+PFL++ + A
Sbjct: 57 GE------DPGPTLARMARDLEAAGAQALAMPCNTAHHYAPAVVAATSLPFLNMLDLTAA 110
Query: 202 ELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFE-VVLPDKATMEHVI 256
L + RIG+LA+ AT AG + G V LPD + + +I
Sbjct: 111 ALAAQGAR--------RIGMLASPATRLAGVFAAPFAAHGLTPVFLPDDSDLLTLI 158
>gi|228917407|ref|ZP_04080958.1| amino-acid racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228842249|gb|EEM87346.1| amino-acid racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 230
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 104/252 (41%), Gaps = 41/252 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK E P ++ C P + H
Sbjct: 8 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDIEFPHMMIYSCPTPFYMDRPID---HEA 64
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ + SIP L++ +
Sbjct: 65 MKKAI----IEGAQK---------LESTGASFIAMPCNTAHLYFEELQQSLSIPILNIVD 111
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
K + E + R+ +LAT+AT+ +G YQ+ + + E + ++ + I
Sbjct: 112 ETLKAIPE---------TAKRVALLATEATVQSGIYQDGIAKRNIEYIHYEQ--WQESIN 160
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E A L + L L V+ II ++ V +D +D
Sbjct: 161 KIITYIKSGEVEEAHRLWE-ALVLQLKDEVDTAIIACTDLNVVASED------FVDSAQC 213
Query: 318 LARSTVTWARSN 329
LA++ V N
Sbjct: 214 LAKAVVRMYVEN 225
>gi|398805251|ref|ZP_10564230.1| aspartate racemase [Polaromonas sp. CF318]
gi|398092032|gb|EJL82454.1| aspartate racemase [Polaromonas sp. CF318]
Length = 246
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 166 GARCIVMPCHISHAWHGDVSEGC-SIPFLHVGECVAKELKEAKLKPLEAGSGVR-IGVLA 223
GA + + C+ +HAWHG + E + LHV VA L A GVR +G+LA
Sbjct: 87 GATTVAVACNTAHAWHGQLQERFPQLEVLHVAREVAHTL---------AARGVREVGLLA 137
Query: 224 TDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLL 283
T+ T AG Y + L+ G + P E ++ E + +M AR + L
Sbjct: 138 TEGTYRAGLYDQALRQAGLQCHTPAAEERERLMRGIYEGVKVGNMALARECFTGVAEALA 197
Query: 284 VR-AVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDAL 318
R ++ +I+G E+ PL + M+AL
Sbjct: 198 ARHGLSTLILGCTEI--------PLALSAVPGMEAL 225
>gi|228910604|ref|ZP_04074416.1| amino-acid racemase [Bacillus thuringiensis IBL 200]
gi|228849019|gb|EEM93861.1| amino-acid racemase [Bacillus thuringiensis IBL 200]
Length = 224
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 18/170 (10%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE G I MPC+ +H + ++ SIP L++ + + + E +K R+ +
Sbjct: 70 LESTGVEFIAMPCNTAHLYFEELQHSLSIPILNIVDETLQTIPE-NIK--------RVTL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQL 281
LAT+AT+ AG YQ+ + + E + ++ + I I + ++E AR L + + +
Sbjct: 121 LATEATIQAGIYQDGIAKRNIEYIHNEQ--WQESINQIITCIKGGEIEEARKLWSVLV-V 177
Query: 282 LLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTWARSNKK 331
L V+ II ++ V +D +D LA + V SNKK
Sbjct: 178 QLKAEVDTAIIACTDLNVVADED------FVDSAQCLADAVVEMYLSNKK 221
>gi|254470848|ref|ZP_05084251.1| aspartate racemase [Pseudovibrio sp. JE062]
gi|211959990|gb|EEA95187.1| aspartate racemase [Pseudovibrio sp. JE062]
Length = 212
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
Query: 149 GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAK- 207
G++ + HK LE AGA CIV+ + H + +G +IPF+H+ E A +++ K
Sbjct: 34 GSLLKQAAHK---LESAGADCIVICANTMHKVASYIQDGLTIPFIHIAETTATAIQKVKR 90
Query: 208 LKPLEAGSGVRIGVLATDATLSAGFYQEKLQN-QGFEVVLPDKA--TMEHVIIPTIEALN 264
KPL +LAT + FY ++L+ G VV+PD + H I
Sbjct: 91 RKPL---------LLATRYLMEHDFYVKRLEELHGMSVVVPDNGGQAVVHDIAYNELCRG 141
Query: 265 HRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVT 324
+ + R LL+I ++ + ++VI+G E+ G+L + + ID R +
Sbjct: 142 QINEDSRRTLLQI-VRKAQDQGADSVILGCTEL-GLLVGQEDISAPVIDSTTEHVRGILD 199
Query: 325 WA 326
+A
Sbjct: 200 FA 201
>gi|298368550|ref|ZP_06979868.1| aspartate racemase [Neisseria sp. oral taxon 014 str. F0314]
gi|298282553|gb|EFI24040.1| aspartate racemase [Neisseria sp. oral taxon 014 str. F0314]
Length = 230
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 86/216 (39%), Gaps = 21/216 (9%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST V Y E + N A ++ SV + +Q
Sbjct: 3 TIGIIGGMSPEST-------VLYYQIINRETNRRLGGNRSA---KILLDSVDFEEIVRLQ 52
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
A L LE GA +++ + H + + IP LHV + A +
Sbjct: 53 KSGDWAAAGNVLAQSARKLEAGGADFLLLATNTMHKVAPAIEQAAGIPLLHVVDATAAAI 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME--HVIIPTIE 261
K L +G+L T T+S GFY E++ +QG + + P A + H II
Sbjct: 113 KRQGLSA--------VGLLGTRFTMSDGFYTERMGSQGVQTIAPTAAEQDEIHRIIFDEL 164
Query: 262 ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
LN E AR + I L VI+G E+
Sbjct: 165 CLNRIRPESARYFYDV-IGRLKNEGAQGVILGCTEI 199
>gi|229074908|ref|ZP_04207917.1| hypothetical protein bcere0024_19430 [Bacillus cereus Rock4-18]
gi|228708245|gb|EEL60409.1| hypothetical protein bcere0024_19430 [Bacillus cereus Rock4-18]
Length = 232
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 45/239 (18%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKS-- 139
TIG+IGG+S ST + LNEE+ +HS K
Sbjct: 3 TIGLIGGMSWESTSEYY----------------------RILNEEIKSRLGGLHSAKCLI 40
Query: 140 KTVQLDHIR--------GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
+V + I + L + L++ GA I++ + H + E +IP
Sbjct: 41 NSVDFEEIERFQSNGDWDGAGEVLGNAAYSLQKGGADFIIICTNTMHKVVEKIKENINIP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ + AKE+K ++ IG+L T T+ FY+ +++ +V++P +
Sbjct: 101 VLHIADTTAKEIKRKGIQT--------IGLLGTKYTMEQDFYKSRIEENNIKVIVPVEKN 152
Query: 252 MEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
E + II T E + +R + I+ L+ + +I+G E+ ++ ++D L+
Sbjct: 153 REKLNEIIYT-ELCLGKITSQSREYYKRVIEELVQKGAQGIILGCTEIGLLIKQEDVLV 210
>gi|339641117|ref|ZP_08662561.1| aspartate racemase [Streptococcus sp. oral taxon 056 str. F0418]
gi|339454386|gb|EGP67001.1| aspartate racemase [Streptococcus sp. oral taxon 056 str. F0418]
Length = 230
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 104/252 (41%), Gaps = 34/252 (13%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASVHSLKSK 140
TIG+IGG+S ST ++ + + N+ E L A +
Sbjct: 2 KTIGLIGGMSWESTTSY-----------------YQIINETIKKELGGLHSAKILLYSVD 44
Query: 141 TVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+++H + Q L LEQAGA IV+ + H + E +IP LH+
Sbjct: 45 FAEIEHYQAVGDWEKSGQLLADVAKRLEQAGADFIVICTNTMHKVAPQIQEKITIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ A+ L ++ ++G+L T T++ FY+EKL G EV++P++A + V
Sbjct: 105 AQATAQALLADGIQ--------KVGLLGTKYTMTQDFYKEKLIESGLEVLIPNQAGITEV 156
Query: 256 IIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDP 314
+ L D+ E ++ I L AVI+G E+ G+L K D
Sbjct: 157 NRIIYDELCLGDIKESSKQTYLTIIDDLKKAGAEAVILGCTEI-GLLVKQSDTDLPLYDT 215
Query: 315 MDALARSTVTWA 326
A+ WA
Sbjct: 216 TVIHAQKAAEWA 227
>gi|152977916|ref|YP_001343545.1| aspartate racemase [Actinobacillus succinogenes 130Z]
gi|150839639|gb|ABR73610.1| aspartate racemase [Actinobacillus succinogenes 130Z]
Length = 231
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 155 LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAG 214
L + LE+AGA I++ + H +++ S+PFLH+ + VA +K L
Sbjct: 64 LAEQAKLLERAGADGILLATNTMHKVANRITDRISVPFLHILDVVANRIKARGL------ 117
Query: 215 SGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK 249
+ +L T T+S FY++ L +G ++PDK
Sbjct: 118 --THVALLGTAFTMSDNFYRDGLTQRGINAIVPDK 150
>gi|443471167|ref|ZP_21061240.1| Aspartate racemase [Pseudomonas pseudoalcaligenes KF707]
gi|442901070|gb|ELS27069.1| Aspartate racemase [Pseudomonas pseudoalcaligenes KF707]
Length = 234
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L+ AGA +++ + H + IP LH+G+ V L+AG R +
Sbjct: 69 LQGAGATALLLATNTMHKVAEAIEAAVDIPLLHIGDAVG--------TALQAGGVTRAAL 120
Query: 222 LATDATLSAGFYQEKL-QNQGFEVVLPDKATMEHVIIPTIEALN-HRDMEGARNLLRIGI 279
L T T+ FY+E+L Q G +V+ PD M V + L R + AR+ +
Sbjct: 121 LGTRFTMQEDFYRERLRQRFGIQVLTPDPEAMAEVDRVIFQELCLGRFLPEARDFYLAEL 180
Query: 280 QLLLVRAVNAVIIGSDEMQGVLPK-DDPL 307
+ L VR A I+G E+ +L D PL
Sbjct: 181 ERLKVRGAEAAILGCTEIGLLLEGCDAPL 209
>gi|50120232|ref|YP_049399.1| aspartate/glutamate racemase [Pectobacterium atrosepticum SCRI1043]
gi|49610758|emb|CAG74203.1| putative aspartate/glutamate racemase [Pectobacterium atrosepticum
SCRI1043]
Length = 236
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 28/222 (12%)
Query: 82 ANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKT 141
+ T+G+IGG+S ST+ + + Y + L+ FH + L+S+
Sbjct: 3 SKTLGLIGGMSWESTIPYYRIINEYVKSQLGGLHSAKII----LHSVDFH-EIEQLQSQG 57
Query: 142 --VQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
Q + G ++ LR QAGA IV+ + H +V +P LH+ +
Sbjct: 58 DWEQAAAVLGNIAVGLR-------QAGADAIVICTNTMHKVADEVERASQLPLLHIADAT 110
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATME---HV 255
LK+ LK ++G+L T T+ FY++++Q + +V++PD+ E +
Sbjct: 111 GASLKQHGLK--------KVGLLGTRYTMEQDFYRQRIQERFSVDVIVPDQTGKELVNRI 162
Query: 256 IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
I + N D +R + R IQ L + +I+G E+
Sbjct: 163 IYDELCLGNINDT--SRQVYREIIQQLEQQGAEGIILGCTEI 202
>gi|398903488|ref|ZP_10651700.1| aspartate racemase [Pseudomonas sp. GM50]
gi|398176956|gb|EJM64654.1| aspartate racemase [Pseudomonas sp. GM50]
Length = 230
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE GA C+V+ + H G + IPFLH+ + A L+AG+ +R+G+
Sbjct: 71 LEAGGAECVVLCTNTMHKVAGQIQAAIDIPFLHIAD-------PAGQAALDAGA-LRVGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP--DKATMEHVIIPTIEALNHRDMEGARNLLRIGI 279
L T T+ F + +L +G V++P D+ H II E E +R + + I
Sbjct: 123 LGTAFTMEQDFLKARLTAKGLTVLVPEADERLAVHRIIYD-ELCVGVISEASRQVYQRVI 181
Query: 280 QLLLVRAVNAVIIGSDEM 297
+ L R A+I+G E+
Sbjct: 182 ESLTERGAQAIILGCTEI 199
>gi|164686387|ref|ZP_02210417.1| hypothetical protein CLOBAR_02825 [Clostridium bartlettii DSM
16795]
gi|164601989|gb|EDQ95454.1| aspartate racemase [Clostridium bartlettii DSM 16795]
Length = 233
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LEQ G IV+ C+ +H ++ ++E +IP L + E K KE+ K L G+
Sbjct: 73 LEQFGVDFIVITCNTAHYFYDKINESVNIPVLSIVEETVKYAKESGHKKL--------GI 124
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV---IIPTIEALNHRDMEGARNLLRIG 278
+AT + YQ + E + D + V I I++ DM L
Sbjct: 125 MATTGNIKTELYQTMCKKFDMEYFVLDDERQQQVMEIIYDDIKSGKPADMNKFNKL---- 180
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC-IDPMDALARSTVTWARSNKKL 332
+ L + +++G E+ +L D+ L ID ++ LAR T+ +SN+K+
Sbjct: 181 VNHLKENECDGIVLGCTEL-SILKNDNNLGNDLYIDSLEVLARQTII--KSNRKV 232
>gi|139437255|ref|ZP_01771415.1| Hypothetical protein COLAER_00394 [Collinsella aerofaciens ATCC
25986]
gi|133776902|gb|EBA40722.1| aspartate racemase [Collinsella aerofaciens ATCC 25986]
Length = 276
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 110/261 (42%), Gaps = 29/261 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQL 144
+G+IGG+ +T + ++V ++A C+ ++ + S ++ ++
Sbjct: 32 LGVIGGMGAEATSYYYDQVVRHTA---------AACDQEHIDMVVLSKSTMPDRTLAIKT 82
Query: 145 -DHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV-GECVAKE 202
+H + + ++ LE G I +PC+ SH ++ + +P +H+ E V
Sbjct: 83 GEHAK--LLATMKECAQALESLGCAHIAIPCNTSHYFYDQIQSFTKVPIIHMPRESVRYA 140
Query: 203 LKEAKLKPLEAGSGV--------RIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEH 254
L A + E + +IG++ TD T+ AG Y + + G EVV P +
Sbjct: 141 LAGAVMGECEFDPNLSMPAEPVHKIGIMGTDGTVGAGVYGRECKAAGVEVVYPSEKRQND 200
Query: 255 V---IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKC 311
V I ++A DM+ ++ + VI+ E+ VL K + +
Sbjct: 201 VMSLIYDDVKAGREPDMDKFDRVM----WEFARSGCDRVILACTELS-VLQKYREMPEIT 255
Query: 312 IDPMDALARSTVTWARSNKKL 332
+D MD L R ++ + + +L
Sbjct: 256 LDAMDVLVRESIIRSGAPYRL 276
>gi|323491837|ref|ZP_08097012.1| aspartate racemase [Vibrio brasiliensis LMG 20546]
gi|323313972|gb|EGA67061.1| aspartate racemase [Vibrio brasiliensis LMG 20546]
Length = 230
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 22/226 (9%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST + +L + ++ + LN F A V +L+
Sbjct: 3 TIGIIGGMSWESTATYYQQL----NQGIKQAKGGLHSAKIILNSVDF-AQVEALQRSGDW 57
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L A + L +E+AGA I++ + H V E ++P LH+ + EL
Sbjct: 58 L-----ANADILCQAAQSIEKAGADFILIATNTMHKVAEQVEESVNLPLLHIADATGSEL 112
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPD--KATMEHVIIPTI 260
K+ + ++G+L T T+ FY+++L ++ G EVV+P+ + + H II
Sbjct: 113 KQQGI--------TKVGLLGTVFTMEQDFYKQRLTDKFGIEVVVPNGVQRQLVHNIIYDE 164
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDP 306
+ + L I I L V VI+G E+ ++ + D
Sbjct: 165 LCQGEINRRSKDDFLTI-IDDLFVAGAQGVILGCTEIGLLVEQQDT 209
>gi|30020311|ref|NP_831942.1| aspartate racemase [Bacillus cereus ATCC 14579]
gi|29895862|gb|AAP09143.1| Aspartate racemase [Bacillus cereus ATCC 14579]
Length = 230
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 52/241 (21%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKS-- 139
TIG+IGG+S ST + +NEE+ +HS K
Sbjct: 3 TIGLIGGMSWESTSEYY----------------------RIINEEIKERLGGLHSAKCLI 40
Query: 140 KTVQLDHIR-----------GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGC 188
+V + I G + N+ + L++ GA I++ + H + E
Sbjct: 41 NSVDFEEIERCQSSGDWDGAGEILGNVAYS---LQKGGADFIIICTNTMHKVVEKIKEKI 97
Query: 189 SIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
IPFLH+ + AKE+K ++ ++G+L T T+ FY+ +++ +V++P
Sbjct: 98 DIPFLHIADATAKEIKRKDIQ--------KVGLLGTKYTMEQDFYKSRIEEHDIKVIVPS 149
Query: 249 KATMEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDP 306
E V +I T L ++ R+ I+ L+ +I+G E+ G+L K +
Sbjct: 150 GTNREKVNEVIYTELCLGKIVVQSREYYKRV-IEELVQEGAQGIILGCTEI-GLLIKQEN 207
Query: 307 L 307
+
Sbjct: 208 V 208
>gi|419782595|ref|ZP_14308395.1| aspartate racemase [Streptococcus oralis SK610]
gi|383183129|gb|EIC75675.1| aspartate racemase [Streptococcus oralis SK610]
Length = 245
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 38/183 (20%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASVHSLKSK 140
TIG+IGG+S ST ++ + + N+ E L A +
Sbjct: 2 KTIGLIGGMSWESTTSY-----------------YQIINETIKKELGGLHSAKILLYSVD 44
Query: 141 TVQLDHIR--------GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+++H + G + ++ H+ LEQAGA IV+ + H + E IP
Sbjct: 45 FAEIEHYQAVGDWEKSGQLLADVAHR---LEQAGADFIVICTNTMHKVAPQIQEKIMIPI 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
LH+ + A+ L ++ ++G+L T T++ FY+EKL G EV++PD+A +
Sbjct: 102 LHIAQATAQALLADGIQ--------KVGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGI 153
Query: 253 EHV 255
V
Sbjct: 154 TEV 156
>gi|223039044|ref|ZP_03609335.1| aspartate racemase subfamily [Campylobacter rectus RM3267]
gi|222879683|gb|EEF14773.1| aspartate racemase subfamily [Campylobacter rectus RM3267]
Length = 229
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 25/226 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE-ELFHASVHSLKSKTVQ 143
IG+IGG+S ST+++ E+ V ALN E+ +S++ + + Q
Sbjct: 4 IGLIGGMSYESTMSYY-----------EQINRKVNERLGALNSAEILLSSLNFEEIEACQ 52
Query: 144 LDHIRGAVSQNL-RHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
++ A + L RH R L+ G I + + H V S+P +H+ +
Sbjct: 53 RENRWDAAGEILARHAR-ILQGGGCDFIFICTNTMHKCFDAVQSAVSVPVVHIAQ----- 106
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV--IIPTI 260
A LK L A R+G+L T T+ FY+E LQ G V++P+ M + +I
Sbjct: 107 ---ATLKRLLASGVQRVGLLGTIYTMKESFYKETLQKGGVNVLIPNAEDMRMINDVIFKE 163
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDP 306
L + R+ LR+ I + I+G E+ ++ + D
Sbjct: 164 LCLGKISPDSKRDFLRV-IDKMADAGAQGAILGCTEIGMLVSQADT 208
>gi|372277543|ref|ZP_09513579.1| aspartate racemase [Pantoea sp. SL1_M5]
Length = 243
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 150 AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDV-SEGCSIPFLHVGECVAKELKEAKL 208
A+ L+ A L +A I +PC+++H + ++ + +IP LH+ + + +
Sbjct: 61 AMIATLQQGIAELVRAKVSLIAVPCNLAHCYFAEMKAVSFAIPLLHIADSALESV----- 115
Query: 209 KPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVV 245
P EA RI VLAT+ TL A FYQE+++ G E++
Sbjct: 116 -PAEA---TRIAVLATEPTLEASFYQERIEASGKEII 148
>gi|350570695|ref|ZP_08939042.1| aspartate racemase [Neisseria wadsworthii 9715]
gi|349795085|gb|EGZ48890.1| aspartate racemase [Neisseria wadsworthii 9715]
Length = 229
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 92/227 (40%), Gaps = 27/227 (11%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKT-V 142
TIGIIGG+S ST++ +Y + E N +HS+ +T V
Sbjct: 3 TIGIIGGMSPESTVS------YYQIINRE-------TNARLGGNHSADIVMHSIDFETIV 49
Query: 143 QLDHIR--GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
+L + + L LE GA +V+ + H + IP LHV + A
Sbjct: 50 RLQKVGDWAGAGRILAASARKLESMGADVLVLATNTMHKIADAIQSAVGIPLLHVVDTTA 109
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATME--HVIIP 258
+ +K L +G+L T T+S GFY E+++ G E ++P H II
Sbjct: 110 QAVKAQGLNT--------VGLLGTRFTMSDGFYTERMKQHGIETLVPADTQQHTVHRIIF 161
Query: 259 TIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
LN + R L I I L + VI G E+ +L + D
Sbjct: 162 EELCLNRFEPAAKRAYLDI-IACLKEQGAQGVIFGCTEIGLLLKQQD 207
>gi|385331144|ref|YP_005885095.1| aspartate racemase [Marinobacter adhaerens HP15]
gi|311694294|gb|ADP97167.1| aspartate racemase [Marinobacter adhaerens HP15]
Length = 231
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 102/237 (43%), Gaps = 45/237 (18%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG++GG+S ST + + + N+ N +HS K
Sbjct: 2 KTIGLLGGMSWESTQTY-----------------YRLINEGVKNR---LGGLHSAKLVLF 41
Query: 143 QLDHIRGAVSQNLRHKRAF-------------LEQAGARCIVMPCHISHAWHGDVSEGCS 189
+D A + L+HK + +++AGA +V+ + H ++ +
Sbjct: 42 SVDF---AEIEALQHKGDWPATADILTGAALSVQKAGADFLVIGTNTMHKVAPEIEQAIG 98
Query: 190 IPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK 249
IP LH+ + A+ LK+ + R G+L T T+ FY+E+L+ G +V+ PD+
Sbjct: 99 IPLLHIADATAQLLKKEGV--------TRAGLLGTRFTMEQAFYRERLEAAGIDVLTPDE 150
Query: 250 ATMEHVIIPTIEALNHRDME-GARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
+ + V E L +++ +R+ + L R AVI+G E+ ++ + D
Sbjct: 151 SQRDEVHRVIYEELCQGEIKPDSRHTYLDIVSSLSGRGAQAVILGCTEIGLLISQAD 207
>gi|260777724|ref|ZP_05886617.1| aspartate racemase [Vibrio coralliilyticus ATCC BAA-450]
gi|260605737|gb|EEX32022.1| aspartate racemase [Vibrio coralliilyticus ATCC BAA-450]
Length = 230
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 45/179 (25%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIGIIGG+S ST ++ ++ + A L S +
Sbjct: 3 TIGIIGGMSWESTASYYKQI-----------------------NQRVKAEKGGLHSAKLI 39
Query: 144 LDHIRGAVSQNLRHKRAF-------------LEQAGARCIVMPCHISHAWHGDVSEGCSI 190
L+ + A + L+HK + LE+AGA +++ + H V E SI
Sbjct: 40 LNSVDFAEIEALQHKGEWDKTAIILSEAAQSLEKAGADFLLIATNTMHKVASQVEEAVSI 99
Query: 191 PFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPD 248
P LH+ + ++L E + ++G+L T T+ FY+++L ++ G EV++P+
Sbjct: 100 PLLHIADATGQQLAEQGIN--------KVGLLGTAFTMEQLFYKQRLTDKFGIEVIVPN 150
>gi|423386270|ref|ZP_17363526.1| aspartate racemase [Bacillus cereus BAG1X1-2]
gi|423527398|ref|ZP_17503843.1| aspartate racemase [Bacillus cereus HuB1-1]
gi|401633700|gb|EJS51473.1| aspartate racemase [Bacillus cereus BAG1X1-2]
gi|402453073|gb|EJV84880.1| aspartate racemase [Bacillus cereus HuB1-1]
Length = 224
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 105/254 (41%), Gaps = 41/254 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVARCQTIYGAKYDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I GA LE GA I MPC+ +H + ++ SIP L++ +
Sbjct: 59 MKKAI----IDGAQK---------LESTGASFIAMPCNTAHLYFEELQRSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVII 257
+ + E + R+ +LAT+AT+ A YQ+ + + + + +K + I
Sbjct: 106 ETLQAIPE---------NTKRVALLATEATVQARIYQDGIAKRNIKYIHHEK--WQESIN 154
Query: 258 PTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDA 317
I + ++E AR L + L L V+ II ++ V +D +D
Sbjct: 155 QIITCIKSGEIEEARELWN-ALVLQLRDEVDTAIIACTDLNVVANED------FVDSSQY 207
Query: 318 LARSTVTWARSNKK 331
LA + V SNKK
Sbjct: 208 LAEAVVEMYLSNKK 221
>gi|452856341|ref|YP_007498024.1| Putative aspartate racemase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452080601|emb|CCP22364.1| Putative aspartate racemase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 232
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
LE+AGA IV+ + H G + E +IP LH+ + A+++ ++ +G+
Sbjct: 71 LEKAGADFIVICTNTMHKVLGYIQEMITIPILHIADATAEQIIRQDIRS--------VGL 122
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDM-EGARNLLRIGIQ 280
L T T+ FY+ ++ + V++PD E + + L ++ + ++N+ + I
Sbjct: 123 LGTKYTMEQDFYKSRIASHAINVIVPDDDERELINNIIYQELCLGEIKQSSKNIYKKIIN 182
Query: 281 LLLVRAVNAVIIGSDEMQGVLPK 303
L+ R +I+G E+ G+L K
Sbjct: 183 NLVDRGAEGIILGCTEI-GLLVK 204
>gi|262283680|ref|ZP_06061445.1| aspartate racemase [Streptococcus sp. 2_1_36FAA]
gi|262260737|gb|EEY79438.1| aspartate racemase [Streptococcus sp. 2_1_36FAA]
Length = 230
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASVHSLKSK 140
TIG+IGG+S ST ++ + + N+ E L A +
Sbjct: 2 KTIGLIGGMSWESTTSY-----------------YQIINETIKKELGGLHSAKILLYSVD 44
Query: 141 TVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+++H + Q L LEQAGA IV+ + H + + +IP LH+
Sbjct: 45 FAEIEHYQAVGDWEKSGQLLADVAQRLEQAGADFIVICTNTMHKVAPQIQKKITIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
+ A+ L ++ ++G+L T T++ FY+EKL G EV++PD+A + V
Sbjct: 105 AQATAQALLADGIQ--------KVGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGITEV 156
Query: 256 IIPTIEALNHRDM-EGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPK 303
+ L D+ E ++ I L AVI+G E+ G+L K
Sbjct: 157 NRIIYDELCLGDIKESSKQTYLTIIDDLKKAGAEAVILGCTEI-GLLVK 204
>gi|301053755|ref|YP_003791966.1| aspartate racemase [Bacillus cereus biovar anthracis str. CI]
gi|300375924|gb|ADK04828.1| aspartate racemase family protein RacD [Bacillus cereus biovar
anthracis str. CI]
Length = 232
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 107/266 (40%), Gaps = 56/266 (21%)
Query: 84 TIGIIGGVSVSSTLNF-----------LGKLVWYSAK------DAEECPPFVVCNDPALN 126
TIG+IGG+S ST + LG L +SAK D EE + D
Sbjct: 3 TIGLIGGMSWESTAEYYRIINEEIKSRLGGL--HSAKCLINSVDFEEIERYQSSGDWDSA 60
Query: 127 EELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSE 186
E+ + +SL ++ GA I++ + H + E
Sbjct: 61 GEILGNAAYSL-------------------------QKGGADFIIICTNTMHKVVEKIKE 95
Query: 187 GCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVL 246
IP LH+ + AKE+K ++ +G+L T T+ FY+ +++ +VV+
Sbjct: 96 NIHIPILHIADATAKEIKRKDIQT--------VGLLGTKYTMEQDFYKSRIEENHIKVVV 147
Query: 247 PDKATMEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKD 304
P + + V +I T L + +R + I+ L+ A+I+G E+ G+L K
Sbjct: 148 PSEKDRDKVNEVIYTELCLG-KITSQSREYYKRVIENLIQEGAKAIILGCTEI-GLLIKQ 205
Query: 305 DPLLKKCIDPMDALARSTVTWARSNK 330
+ + D A V +A N+
Sbjct: 206 EDVSVPIFDTTRIHAVEAVHFALQNR 231
>gi|228961020|ref|ZP_04122648.1| amino-acid racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|423631476|ref|ZP_17607223.1| aspartate racemase [Bacillus cereus VD154]
gi|228798653|gb|EEM45638.1| amino-acid racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|401263613|gb|EJR69735.1| aspartate racemase [Bacillus cereus VD154]
Length = 224
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 43/255 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVV--CNDPALNEELFHASVHSL 137
IGI+ G+ ST F+ +V Y AK + P ++ C P + H
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPID---HEA 58
Query: 138 KSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGE 197
K + I+GA LE G I MPC+ +H + ++ SIP L++ +
Sbjct: 59 MKKAI----IKGAQK---------LESTGVSFIAMPCNTAHLYFEELQRSLSIPILNIVD 105
Query: 198 CVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK-ATMEHVI 256
+ + E + R+ +LAT+AT+ AG YQ+ + + E + +K TM + I
Sbjct: 106 ETLQAIPE---------NTKRVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQI 156
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMD 316
I I++ ++E AR L + L V+ II ++ V ++ +D
Sbjct: 157 ITYIKS---GEVEKARKLWS-ALVGQLKDEVDTAIIACTDLNVVASEN------FVDSSQ 206
Query: 317 ALARSTVTWARSNKK 331
LA++ V SN K
Sbjct: 207 CLAKAVVRMYLSNIK 221
>gi|389691445|ref|ZP_10180239.1| aspartate racemase [Microvirga sp. WSM3557]
gi|388588428|gb|EIM28718.1| aspartate racemase [Microvirga sp. WSM3557]
Length = 232
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 22/226 (9%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+S S+ + Y + E + + SV K +
Sbjct: 2 QTIGLIGGMSWESSAEY------YRIINQEANRRL----GGVRSAQCLMYSVDFEDIKRM 51
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
Q + +++Q ++ + LE+ GA IV+ + H +S S+P LH+ + A
Sbjct: 52 QHEGDWDSLAQAMQEAASRLERGGADFIVLCTNTMHRVANAISSAVSLPLLHIADPTADR 111
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKL-QNQGFEVVLPDKAT--MEHVIIPT 259
++ A RIG+L T T+ FY+ +L + G +V++PD+ + H II
Sbjct: 112 IRAAGFN--------RIGLLGTAFTMEQDFYKGRLHERHGLDVIVPDEEDRRIVHEIIYK 163
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
L E +R+ R I L+ R +I+G E+ ++ +D
Sbjct: 164 ELVLGVIKPE-SRHAYRDIIARLIERGAQGIILGCTEIMLLVSDED 208
>gi|306828496|ref|ZP_07461691.1| aspartate racemase [Streptococcus mitis ATCC 6249]
gi|304429295|gb|EFM32380.1| aspartate racemase [Streptococcus mitis ATCC 6249]
Length = 230
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 38/183 (20%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLK---- 138
TIG+IGG+S ST ++ + + N+ + +EL +HS K
Sbjct: 2 KTIGLIGGMSWESTTSY-----------------YQIINE-IIKKEL--GGLHSAKILLY 41
Query: 139 -SKTVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPF 192
+++H + Q L LEQAGA IV+ + H + E +IP
Sbjct: 42 SVDFAEIEHYQAVGDWEKSGQLLADVVQRLEQAGADFIVICTNTMHKVAPQIQEKITIPI 101
Query: 193 LHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATM 252
LH+ + A+ L ++ ++G+L T T++ FY+EKL G EV++PD+A +
Sbjct: 102 LHIAQATAQALLADGIQ--------KVGLLGTKYTMTQDFYKEKLIESGLEVLIPDQAGI 153
Query: 253 EHV 255
V
Sbjct: 154 TEV 156
>gi|358064019|ref|ZP_09150614.1| hypothetical protein HMPREF9473_02677 [Clostridium hathewayi
WAL-18680]
gi|356697805|gb|EHI59370.1| hypothetical protein HMPREF9473_02677 [Clostridium hathewayi
WAL-18680]
Length = 229
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 32/180 (17%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE-------ELFHASVH 135
TIG+IGG+S ST+ + + + N+ E + SV
Sbjct: 2 KTIGMIGGMSWESTVTY-----------------YQIINEVVKKELGGLHSARILLYSVD 44
Query: 136 SLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+ + Q D + L LE+AGA I++ + H + IP LH+
Sbjct: 45 FAEIEQCQADGDWERSGEILAEAARSLEKAGADFIIICTNTMHKVVPQMQRQIQIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV 255
E A EL ++ ++ +L T T++ FY+EKL G EV++PD +E V
Sbjct: 105 AEATAAELLHHNIR--------KVALLGTKYTMTQEFYKEKLTAAGIEVLIPDAQGIETV 156
>gi|399888700|ref|ZP_10774577.1| aspartate racemase [Clostridium arbusti SL206]
Length = 233
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 28/227 (12%)
Query: 85 IGIIGGVSVSSTLNFLGKLVW-YSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
IGI+GG+ ST+++ L++ Y + P ++ + + E L S K V
Sbjct: 3 IGIVGGIGPESTVDYYKSLIYKYQKIKTDGSYPKIIIDSIDMKEVLTLVSNKEW-YKLVN 61
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
L + +L + L AGA V+ + H + + +P L + E K
Sbjct: 62 L------IVNSLNN----LYMAGATIGVISSNTPHIVFYKIKKLSPMPVLSIVEETRKRA 111
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV---IIPTI 260
KE KLK R+ +L T T+ FY++ ++V+P KA E++ I +
Sbjct: 112 KEMKLK--------RLALLGTLTTMEEPFYKDSFLKSAIDIVVPRKAEREYIQQRIFTEL 163
Query: 261 E--ALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD 305
E +N R +G L I ++ +++ VI+G E+ +L D
Sbjct: 164 ENGIINRRTRQG---FLSIINRMKKEESIDGVILGCTEIPLILKDRD 207
>gi|422883054|ref|ZP_16929503.1| aspartate racemase [Streptococcus sanguinis SK49]
gi|332363646|gb|EGJ41426.1| aspartate racemase [Streptococcus sanguinis SK49]
Length = 230
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 32/175 (18%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE--ELFHASVHSLKSK 140
TIG+IGG+S ST ++ + + N+ E L A +
Sbjct: 2 KTIGLIGGMSWESTTSY-----------------YQIINETIKKELGGLHSAKILLYSVD 44
Query: 141 TVQLDHIRGA-----VSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHV 195
+++H + Q L LEQAGA IV+ + H + E +IP LH+
Sbjct: 45 FAEIEHYQAVGDWEKSGQLLADVAKRLEQAGADFIVICTNTMHKVAPQIQEQITIPILHI 104
Query: 196 GECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA 250
+ A+ L ++ ++G+L T T++ FY+EKL G EV++PD+A
Sbjct: 105 AQATAQALLADGIQ--------KVGLLGTKYTMTQDFYKEKLIESGLEVLIPDQA 151
>gi|423600441|ref|ZP_17576441.1| aspartate racemase [Bacillus cereus VD078]
gi|401233635|gb|EJR40127.1| aspartate racemase [Bacillus cereus VD078]
Length = 232
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 101/239 (42%), Gaps = 45/239 (18%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKS-- 139
TIG+IGG+S ST + LNEE+ +HS K
Sbjct: 3 TIGLIGGMSWESTSEYY----------------------RILNEEIKSRLGGLHSAKCLI 40
Query: 140 KTVQLDHIR--------GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIP 191
+V + I + L + L++ GA I++ + H + E +IP
Sbjct: 41 NSVDFEEIERFQSNGDWDGAGEVLGNAAYSLQKGGADFIIICTNTMHKVVEKIKENINIP 100
Query: 192 FLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKAT 251
LH+ + AKE+K ++ IG+L T T+ FY+ +++ +V++P +
Sbjct: 101 VLHIADTTAKEIKRKGIQT--------IGLLGTKYTMEQDFYKSRIEENNIKVIVPVEKN 152
Query: 252 MEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
E + II T E + +R + I+ L+ + +I+G E+ ++ ++D ++
Sbjct: 153 REKINEIIYT-ELCLGKITSQSREYYKRVIEELVQKGAQGIILGCTEIGLLIKQEDVVV 210
>gi|217959736|ref|YP_002338288.1| aspartate racemase family protein [Bacillus cereus AH187]
gi|229138929|ref|ZP_04267508.1| Aspartate racemase [Bacillus cereus BDRD-ST26]
gi|375284245|ref|YP_005104683.1| aspartate racemase family protein [Bacillus cereus NC7401]
gi|423352032|ref|ZP_17329659.1| aspartate racemase [Bacillus cereus IS075]
gi|423568845|ref|ZP_17545092.1| aspartate racemase [Bacillus cereus MSX-A12]
gi|217064172|gb|ACJ78422.1| aspartate racemase family protein [Bacillus cereus AH187]
gi|228644554|gb|EEL00807.1| Aspartate racemase [Bacillus cereus BDRD-ST26]
gi|358352771|dbj|BAL17943.1| aspartate racemase family protein [Bacillus cereus NC7401]
gi|401092942|gb|EJQ01065.1| aspartate racemase [Bacillus cereus IS075]
gi|401208675|gb|EJR15436.1| aspartate racemase [Bacillus cereus MSX-A12]
Length = 234
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 108/263 (41%), Gaps = 46/263 (17%)
Query: 82 ANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFH--ASVHSLKS 139
TIG+IGG+S ST + +NEE+ +HS K
Sbjct: 3 GKTIGLIGGMSWESTAEYY----------------------RIINEEIKSRLGGLHSAKC 40
Query: 140 --KTVQLDHIRG--------AVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCS 189
+V + I G + + L + L+ GA I++ + H + +
Sbjct: 41 LINSVDFEEIEGFQSSGDWDSAGEILGNAAYSLQMGGADFIIICTNTMHKVIEKIKKNIH 100
Query: 190 IPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDK 249
IP LH+ + AKE+K ++ +G+L T T+ FY+ +++ +V++P +
Sbjct: 101 IPVLHIADATAKEMKRKGIQT--------VGLLGTKYTMEQDFYKSRIKENDIKVIVPLE 152
Query: 250 ATMEHV--IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPL 307
E + +I T E + + +R + I+ L+ + +I+G E+ G+L K + +
Sbjct: 153 KNREKINEVIYT-ELCLGKIVSQSREYYKTVIEDLVQKGAQGIILGCTEI-GLLIKQEDV 210
Query: 308 LKKCIDPMDALARSTVTWARSNK 330
D A V +A N+
Sbjct: 211 SIPIFDTTYIHAVEAVNFAVENR 233
>gi|186470440|ref|YP_001861758.1| aspartate racemase [Burkholderia phymatum STM815]
gi|184196749|gb|ACC74712.1| aspartate racemase [Burkholderia phymatum STM815]
Length = 499
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 28/185 (15%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVR-IG 220
LE+ A I +PC+ +HA+ + IP +++ L E E+ G R IG
Sbjct: 314 LEEGDADIIAIPCNTAHAFVERIQPHLGIPIVNM-------LTETVRFVRESWPGYRDIG 366
Query: 221 VLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIG-- 278
VLAT T+S+G Y++ LQ+QG V P +A V +EA+ + G + G
Sbjct: 367 VLATSGTISSGVYEKALQSQGLRQVTPGEALQTRV----MEAIYGNN--GVKAGFTTGRC 420
Query: 279 -------IQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKK-----CIDPMDALARSTVTWA 326
++ ++ V +I+G E+ +LP + + K +DP + LAR + A
Sbjct: 421 QEDIAAAVEGMIAEGVEIIILGCTELPLLLPLAEFIGKNGKRAWLVDPTNVLARRCIAHA 480
Query: 327 RSNKK 331
+ ++
Sbjct: 481 TAARE 485
>gi|197117610|ref|YP_002138037.1| aspartate/glutamate racemase superfamily protein [Geobacter
bemidjiensis Bem]
gi|197086970|gb|ACH38241.1| aspartate/glutamate racemase superfamily protein [Geobacter
bemidjiensis Bem]
Length = 233
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 30/255 (11%)
Query: 83 NTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
TIG+IGG+ +TL++ +++ S P ++ +L E L A+ S +
Sbjct: 2 KTIGMIGGLGPEATLDYYKRIIEASRGAGTLDTPEIIIYSVSLQEVLDLAARREW-SNLI 60
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKE 202
L L K L++AGA + + H +V IP + + ++
Sbjct: 61 YL----------LTAKVKALQKAGADFAFISANTPHVVFDEVQAKSPIPLISIVTATLEK 110
Query: 203 LKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV---IIPT 259
KE +K R+G+L T T+ F+ G VV+P A +++ ++
Sbjct: 111 AKELGVK--------RVGLLGTKFTMEENFFAAPFSAAGISVVIPQPADQQYIQEKLMTE 162
Query: 260 IEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDD---PLLKKCIDPMD 316
IE +D E LL + ++ ++AVI+G E+ +L KD+ P L ++
Sbjct: 163 IELGVFKD-ETRDGLLAVIGRMKEQEHIDAVILGCTELPLILLKDEFGIPFLNTTAIHVE 221
Query: 317 ALARSTVTWARSNKK 331
S V +AR ++
Sbjct: 222 ----SVVEYARKEQR 232
>gi|218463300|ref|ZP_03503391.1| aspartate racemase [Rhizobium etli Kim 5]
Length = 261
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 111/252 (44%), Gaps = 28/252 (11%)
Query: 80 NQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPAL-NEELFHASVHSLK 138
+ TIG+IGG+S S+ V+Y + V L + EL SV+ +
Sbjct: 21 EEMKTIGLIGGMSFESSA------VYYRLVN-----EMVRARRGGLASAELILHSVNFEE 69
Query: 139 SKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGEC 198
+Q S+ L L+ AGA CI++ + H V+ S+P +H+ +
Sbjct: 70 IVALQKAGDWAGASRRLGEVAERLQAAGAGCILICTNTMHLIADKVAAKISVPLIHIIDE 129
Query: 199 VAKELKEA-KLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKA--TMEHV 255
AK L A + +PL +LAT T+ GFY +++++ G +V++PD T H
Sbjct: 130 TAKSLHAAGRKRPL---------LLATRYTMEHGFYTDRMKSLGLDVMVPDATDRTTVHD 180
Query: 256 IIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL-PKDDPLLKKCIDP 314
II E R + +R L I R +++I+G E+ +L P PL D
Sbjct: 181 IIFN-ELCAGRVHDSSREKLIDIIDRAAERGADSIILGCTEICLILDPHRLPL--PGFDT 237
Query: 315 MDALARSTVTWA 326
AR+ V +A
Sbjct: 238 TAIHARAAVDFA 249
>gi|383497683|ref|YP_005398372.1| hypothetical protein UMN798_3276 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|380464504|gb|AFD59907.1| hypothetical protein UMN798_3276 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
Length = 243
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 34/232 (14%)
Query: 92 SVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEEL--FHAS---VHSLKSKTVQLDH 146
S T+ LG + W E P+ + + ++L H++ +HS+ +++
Sbjct: 7 SAVKTIGLLGGMSW------ESTIPYYRLINEGIKQQLGGLHSASLLLHSVDFHDIEVCQ 60
Query: 147 IR------GAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVA 200
R G + H L+QAGA IV+ + H + CS+PFLH+ +
Sbjct: 61 RRDEWDKAGDILAQAAHG---LQQAGAEGIVLCTNTMHKIAHVIESRCSLPFLHIADATG 117
Query: 201 KELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLP---DKATMEHVI 256
+ + L R+ +L T T+ FY+ +L+ Q E ++P D+A + VI
Sbjct: 118 RAIARQGLH--------RVALLGTRYTMEQDFYRGRLEQQFAIETIVPEADDRARINQVI 169
Query: 257 IPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLL 308
E + +R+ I+ L + VI G E+ ++P+ L
Sbjct: 170 FD--ELCQGTFTDASRHYYLQVIEQLAAQGAQGVIFGCTEIGLLVPQTQSAL 219
>gi|154148024|ref|YP_001406048.1| aspartate racemase [Campylobacter hominis ATCC BAA-381]
gi|153804033|gb|ABS51040.1| aspartate racemase [Campylobacter hominis ATCC BAA-381]
Length = 226
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
+GIIGG+ +T++ K+V+ + AK +E P ++ N+ + + + + L +K
Sbjct: 4 VGIIGGMGPLATIDLYKKVVFLTNAKSDQENIPLIIDNNTLIPDR----TAYILGAKEDP 59
Query: 144 LDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKEL 203
+ + + L+Q+G M C+ +H + + E +P LH+ + +
Sbjct: 60 FAELLKSAKR--------LKQSGCDAFCMACNTAHFFADRLVEQSGLPILHIAKITVNAI 111
Query: 204 KEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGF 242
K+ E + ++ VL+T T AG Y +L+ GF
Sbjct: 112 KK------EYKNVKKVAVLSTIGTQKAGIYDNELKKNGF 144
>gi|56965360|ref|YP_177092.1| aspartate racemase [Bacillus clausii KSM-K16]
gi|56911604|dbj|BAD66131.1| aspartate racemase [Bacillus clausii KSM-K16]
Length = 226
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 28/169 (16%)
Query: 85 IGIIGGVSVSSTLNFLGKLV-----WYSAKDAEECPPFVVCNDPALNEELFHASVHSLKS 139
IGI+ G+ ST F+ K V Y A + + P ++ + P F+ L
Sbjct: 2 IGILAGMGPKSTGPFVDKTVDQCQKIYGAVNDIDFPHMMIYSCPTP----FYID-KPLNH 56
Query: 140 KTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECV 199
K +++ I GA KR LE+ G I +PC+ +H + V SIP L++ E
Sbjct: 57 KDMEMAIINGA-------KR--LEKTGVDFIAIPCNTAHVYFDQVKNSLSIPLLNMVEET 107
Query: 200 AKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPD 248
K + E K + +LAT T+ +G +QE L +G+E + D
Sbjct: 108 IKRVPEHSKK---------VALLATIPTVQSGIFQEALAKEGYEFLHQD 147
>gi|366086616|ref|ZP_09453101.1| aspartate racemase [Lactobacillus zeae KCTC 3804]
Length = 249
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 104/246 (42%), Gaps = 18/246 (7%)
Query: 87 IIGGVSVSSTLNFLGKLVWYS-AKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQLD 145
+IGG+ +T +++ L + A +E +++ ND + + + LD
Sbjct: 7 VIGGMGTPATESYVRLLNQRTHAHSDQEYLNYILVNDATVPDRTDYI-----------LD 55
Query: 146 HIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKE 205
H + + +L IV+ C+ +H ++ ++ IP LH+ +++ E
Sbjct: 56 HSKPSFYPDLLEDIQAQSLLNPEFIVIVCNTAHYFYDQLAAATPIPLLHMPRLAIRDMCE 115
Query: 206 AKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEALNH 265
P E RIG++AT T+ G Y ++++N G EVVL D+A + V + +
Sbjct: 116 RF--PDEK----RIGLIATQGTIKDGIYSQEIENTGREVVLGDQALQDMVTELIYKYVKE 169
Query: 266 RDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLKKCIDPMDALARSTVTW 325
+ A RI ++ VN +++G E+ K ID + T+
Sbjct: 170 KGEVSAELYHRILKRMHDDFHVNVIVLGCTELSFAQEKAGDHPYHVIDAQSIIVDKTLAL 229
Query: 326 ARSNKK 331
++ +K
Sbjct: 230 GKAFRK 235
>gi|315125973|ref|YP_004067976.1| aspartate racemase [Pseudoalteromonas sp. SM9913]
gi|315014487|gb|ADT67825.1| aspartate racemase [Pseudoalteromonas sp. SM9913]
Length = 231
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 42/227 (18%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTVQ 143
TIG++GG+S ST ++ + V N+ N +HS K V
Sbjct: 3 TIGMLGGMSWESTASY-----------------YKVLNEGVKNSL---GGLHSAKICMVS 42
Query: 144 LDHIRGAVSQN----------LRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFL 193
+D + Q+ L +E GA +++ + H +++ +IP L
Sbjct: 43 VDFAKIEALQHQGDWQQTAKLLTKAAKSVEAGGAEFLLICTNTMHKVADEIASNITIPIL 102
Query: 194 HVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ-GFEVVLPDKATM 252
H+ + A++LK + R+G+L T T+ FY+E+L N+ EV++P+
Sbjct: 103 HIADATAEQLKHDNI--------TRVGLLGTQFTMEQNFYKERLTNKHNIEVLIPEPNER 154
Query: 253 E--HVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEM 297
+ H +I + D + + +RI I+ L + A+I+G E+
Sbjct: 155 KRVHEVIYSQLCQGIIDDDSRADYIRI-IERLFAQGAQAIILGCTEI 200
>gi|451964716|ref|ZP_21917978.1| putative amino acid racemase [Edwardsiella tarda NBRC 105688]
gi|451316293|dbj|GAC63340.1| putative amino acid racemase [Edwardsiella tarda NBRC 105688]
Length = 230
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 15/148 (10%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGV 221
L+ AGA +++ + H + SIP +H+ + A +K A L+ ++G+
Sbjct: 71 LQGAGADVLLICTNTMHRMAPALESALSIPLIHIADPTAAAIKAAGLR--------KVGL 122
Query: 222 LATDATLSAGFYQEKL-QNQGFEVVLP---DKATMEHVIIPTIEALNHRDMEGARNLLRI 277
L T T+ FY+ +L + G EV++P D+AT+ H+I E + + +R R
Sbjct: 123 LGTAFTMEQDFYKGRLRERHGLEVIVPEADDRATVHHIIYD--ELVAGQITPSSRAAYRQ 180
Query: 278 GIQLLLVRAVNAVIIGSDE-MQGVLPKD 304
I L+ AVI+G E M V P+D
Sbjct: 181 VIARLVQAGAEAVILGCTEIMLLVQPED 208
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.133 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,407,932,521
Number of Sequences: 23463169
Number of extensions: 206178319
Number of successful extensions: 511994
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 1519
Number of HSP's that attempted gapping in prelim test: 508853
Number of HSP's gapped (non-prelim): 2520
length of query: 376
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 232
effective length of database: 8,980,499,031
effective search space: 2083475775192
effective search space used: 2083475775192
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)