Query 017162
Match_columns 376
No_of_seqs 127 out of 1123
Neff 9.4
Searched_HMMs 13730
Date Mon Mar 25 09:57:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017162.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/017162hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2a65a1 f.54.1.1 (A:5-513) Na( 78.6 22 0.0016 31.7 24.6 46 30-76 71-116 (509)
2 d1sfea1 a.4.2.1 (A:93-176) Ada 6.7 95 0.0069 19.8 1.5 21 23-43 14-34 (84)
3 d1qnta1 a.4.2.1 (A:92-176) O6- 6.0 1.3E+02 0.0098 19.1 2.0 26 18-43 9-34 (85)
4 d1wpga4 f.33.1.1 (A:1-124,A:24 5.5 2.7E+02 0.019 23.7 4.4 22 289-310 417-438 (472)
5 d1mgta1 a.4.2.1 (A:89-169) O6- 3.7 1.9E+02 0.014 18.2 1.4 17 24-40 16-32 (81)
6 d1txja_ b.88.1.2 (A:) Translat 3.5 1.8E+02 0.013 21.3 1.3 20 357-376 116-135 (171)
7 d1yz1a1 b.88.1.2 (A:1-172) Tra 2.6 2.5E+02 0.019 20.4 1.3 19 358-376 118-136 (172)
8 d1h6qa_ b.88.1.2 (A:) Translat 2.6 2.6E+02 0.019 20.2 1.3 17 360-376 116-132 (168)
9 d1q90r_ f.23.12.1 (R:) ISP sub 2.6 3.7E+02 0.027 14.2 1.6 18 310-327 18-35 (39)
10 d1h9aa1 c.2.1.3 (A:1-181,A:413 2.4 2.5E+02 0.019 20.7 1.1 28 305-332 6-33 (195)
No 1
>d2a65a1 f.54.1.1 (A:5-513) Na(+):neurotransmitter symporter homologue LeuT {Aquifex aeolicus [TaxId: 63363]}
Probab=78.58 E-value=22 Score=31.67 Aligned_cols=46 Identities=9% Similarity=-0.039 Sum_probs=27.3
Q ss_pred ccHHHHHHHHhCCCCcCeeehhhHHHHHHhhhhhHhhhchhhHHHHH
Q 017162 30 DRYIDLGRHAFGPKLGPWIVLPQQLIVQVGCDIVYMVTGGKCLKKFV 76 (376)
Q Consensus 30 ~sy~~l~~~~~G~~~g~~~~~~~~~~~~~g~~~~y~i~~~~~l~~~~ 76 (376)
..+..+.....+.+..+. +.......++..++-|....+-.+.-..
T Consensus 71 ~~~~~i~~~~~~~~~~~g-iG~~~~~~~~~i~~yy~vi~~w~l~Y~~ 116 (509)
T d2a65a1 71 GTTPAIFYLLWRNRFAKI-LGVFGLWIPLVVAIYYVYIESWTLGFAI 116 (509)
T ss_dssp CSHHHHHHHHSCSHHHHH-HHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHhccCcchhH-HhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 477777777665433233 3555566666666667776666555443
No 2
>d1sfea1 a.4.2.1 (A:93-176) Ada DNA repair protein {Escherichia coli [TaxId: 562]}
Probab=6.72 E-value=95 Score=19.82 Aligned_cols=21 Identities=24% Similarity=0.232 Sum_probs=14.6
Q ss_pred cCCCcccccHHHHHHHHhCCC
Q 017162 23 CVPGVRFDRYIDLGRHAFGPK 43 (376)
Q Consensus 23 ~~~~~~~~sy~~l~~~~~G~~ 43 (376)
+.|..+..||+|+++.+--++
T Consensus 14 ~Ip~G~v~TYg~iA~~~g~~~ 34 (84)
T d1sfea1 14 TIPCGETVSYQQLANAIGKPK 34 (84)
T ss_dssp TSCTTCCEEHHHHHHHTTCTT
T ss_pred cCCCCCeeeHHHHHHHhCCcc
Confidence 345445679999998876443
No 3
>d1qnta1 a.4.2.1 (A:92-176) O6-alkylguanine-DNA alkyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.02 E-value=1.3e+02 Score=19.06 Aligned_cols=26 Identities=27% Similarity=0.134 Sum_probs=17.0
Q ss_pred HhCcccCCCcccccHHHHHHHHhCCC
Q 017162 18 INLHECVPGVRFDRYIDLGRHAFGPK 43 (376)
Q Consensus 18 ~~~~~~~~~~~~~sy~~l~~~~~G~~ 43 (376)
.+.....|..+..||+|+++.+--++
T Consensus 9 w~~l~~IP~G~v~TYg~iA~~~g~p~ 34 (85)
T d1qnta1 9 WKLLKVVKFGEVISYQQLAALAGNPK 34 (85)
T ss_dssp HHHHHHCCTTCCEEHHHHHHHTTCTT
T ss_pred HHHHhcCCCCCcccHHHHHHHcCCcc
Confidence 34433456545679999999865543
No 4
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=5.47 E-value=2.7e+02 Score=23.69 Aligned_cols=22 Identities=5% Similarity=-0.120 Sum_probs=12.9
Q ss_pred HHHHHHHHHHhcccchhhhhhh
Q 017162 289 YVAFTLFVGVTFPFFGDLLGFF 310 (376)
Q Consensus 289 ~~~~~~~lA~~vp~~~~v~~l~ 310 (376)
+..+..++...+|.++++++..
T Consensus 417 i~~~l~~~i~yiP~l~~vf~~~ 438 (472)
T d1wpga4 417 LSMSLHFLILYVDPLPMIFKLK 438 (472)
T ss_dssp HHHHHHHHHHHSTTTHHHHTCC
T ss_pred HHHHHHHHHHHhhHHHHHHccc
Confidence 3333344445688888777653
No 5
>d1mgta1 a.4.2.1 (A:89-169) O6-alkylguanine-DNA alkyltransferase {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]}
Probab=3.73 E-value=1.9e+02 Score=18.16 Aligned_cols=17 Identities=24% Similarity=0.091 Sum_probs=12.3
Q ss_pred CCCcccccHHHHHHHHh
Q 017162 24 VPGVRFDRYIDLGRHAF 40 (376)
Q Consensus 24 ~~~~~~~sy~~l~~~~~ 40 (376)
.|..+..||+|+|+.+-
T Consensus 16 IP~G~v~TYg~iA~~~g 32 (81)
T d1mgta1 16 VKRGSVITYGDLAKALN 32 (81)
T ss_dssp SCTTCCEEHHHHHHHTT
T ss_pred CCCCCeEeHHHHHHHcC
Confidence 45445679999998664
No 6
>d1txja_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Plasmodium knowlesi [TaxId: 5850]}
Probab=3.54 E-value=1.8e+02 Score=21.30 Aligned_cols=20 Identities=15% Similarity=0.401 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHhcccCCCCC
Q 017162 357 STIGGFRNIVADASTYSFYT 376 (376)
Q Consensus 357 gt~~si~~l~~~~~~~~~~~ 376 (376)
+.-..++.++..+++++||+
T Consensus 116 ~a~~~vK~Il~nFkd~qFf~ 135 (171)
T d1txja_ 116 KAQPLIKHILTNFDDFEFYM 135 (171)
T ss_dssp HHHHHHHHHHHTGGGCEEEE
T ss_pred HHHHHHHHHHhhCccceEec
Confidence 44456666777777777663
No 7
>d1yz1a1 b.88.1.2 (A:1-172) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.62 E-value=2.5e+02 Score=20.40 Aligned_cols=19 Identities=21% Similarity=0.546 Sum_probs=11.5
Q ss_pred HHHHHHHHHHhcccCCCCC
Q 017162 358 TIGGFRNIVADASTYSFYT 376 (376)
Q Consensus 358 t~~si~~l~~~~~~~~~~~ 376 (376)
.-..++.++..+++++||+
T Consensus 118 a~~~vK~il~~fkd~qFf~ 136 (172)
T d1yz1a1 118 AAEQIKHILANFKNYQFFI 136 (172)
T ss_dssp HHHHHHHHHHTGGGCEEEE
T ss_pred hHHHHHHHHhccccceEEc
Confidence 3445566666666666663
No 8
>d1h6qa_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=2.60 E-value=2.6e+02 Score=20.25 Aligned_cols=17 Identities=35% Similarity=0.700 Sum_probs=11.0
Q ss_pred HHHHHHHHhcccCCCCC
Q 017162 360 GGFRNIVADASTYSFYT 376 (376)
Q Consensus 360 ~si~~l~~~~~~~~~~~ 376 (376)
..++.+..++++++||+
T Consensus 116 ~~vK~Il~nFkd~qFf~ 132 (168)
T d1h6qa_ 116 GFVKKILANFKDYDFYI 132 (168)
T ss_dssp HHHHHHHTTTTTTCCEE
T ss_pred HHHHHHHhcCccceEec
Confidence 55666666677777663
No 9
>d1q90r_ f.23.12.1 (R:) ISP subunit from the cytochrome b6f complex, transmembrane anchor {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=2.60 E-value=3.7e+02 Score=14.17 Aligned_cols=18 Identities=28% Similarity=0.285 Sum_probs=8.9
Q ss_pred hhcccchhhHHhhhHHHH
Q 017162 310 FGGFGFTPTSYFLPSIMW 327 (376)
Q Consensus 310 ~Ga~~~~~l~~ilP~l~~ 327 (376)
.|+.+........|-..|
T Consensus 18 ~G~~~~~~~g~l~py~~f 35 (39)
T d1q90r_ 18 AGGAGLPITTLALGYGAF 35 (39)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HhccchhhhhhccceeEE
Confidence 355555555555554433
No 10
>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}
Probab=2.44 E-value=2.5e+02 Score=20.67 Aligned_cols=28 Identities=36% Similarity=0.529 Sum_probs=23.0
Q ss_pred hhhhhhhcccchhhHHhhhHHHHHHHhC
Q 017162 305 DLLGFFGGFGFTPTSYFLPSIMWLVIKK 332 (376)
Q Consensus 305 ~v~~l~Ga~~~~~l~~ilP~l~~l~~~~ 332 (376)
.++-+.||++.-..=-++|+++++....
T Consensus 6 t~lVIFGaTGDLa~RKL~PAL~~L~~~g 33 (195)
T d1h9aa1 6 TLVTFFGGTGDLAKRKLYPSVFNLYKKG 33 (195)
T ss_dssp EEEEEETTTSHHHHHTHHHHHHHHHHTT
T ss_pred eEEEEECcccHHHHhHHHHHHHHHHHcC
Confidence 3455679999999999999999988654
Done!