Query 017163
Match_columns 376
No_of_seqs 329 out of 3383
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 09:58:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017163.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017163hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t4n_C Nuclear protein SNF4; C 100.0 1.9E-43 6.6E-48 333.3 29.1 310 29-375 11-320 (323)
2 2qrd_G Protein C1556.08C; AMPK 100.0 5.8E-37 2E-41 290.3 31.7 307 31-375 5-315 (334)
3 2v8q_E 5'-AMP-activated protei 100.0 1.3E-36 4.4E-41 287.5 26.4 300 36-375 23-323 (330)
4 3kh5_A Protein MJ1225; AMPK, A 100.0 3.2E-34 1.1E-38 264.2 19.3 270 49-374 4-280 (280)
5 3ddj_A CBS domain-containing p 100.0 1.3E-33 4.5E-38 262.8 18.1 264 47-375 19-285 (296)
6 2yzq_A Putative uncharacterize 100.0 7.4E-31 2.5E-35 242.2 16.1 257 58-375 9-279 (282)
7 3kh5_A Protein MJ1225; AMPK, A 99.9 1.4E-24 4.6E-29 199.7 19.2 195 149-374 9-204 (280)
8 3ddj_A CBS domain-containing p 99.9 3.4E-24 1.2E-28 199.1 15.1 192 146-374 22-213 (296)
9 2v8q_E 5'-AMP-activated protei 99.9 1.2E-22 3.9E-27 191.7 14.2 206 148-374 39-250 (330)
10 3t4n_C Nuclear protein SNF4; C 99.9 2.8E-22 9.6E-27 188.4 16.6 200 151-375 39-248 (323)
11 2yzq_A Putative uncharacterize 99.9 4.4E-22 1.5E-26 183.2 11.5 173 149-370 6-179 (282)
12 2qrd_G Protein C1556.08C; AMPK 99.9 2.2E-21 7.4E-26 183.2 15.5 208 149-375 27-243 (334)
13 4esy_A CBS domain containing m 99.9 5.8E-22 2E-26 169.1 9.2 137 235-375 19-162 (170)
14 3k6e_A CBS domain protein; str 99.8 4.4E-20 1.5E-24 155.2 11.3 123 236-374 17-141 (156)
15 3lv9_A Putative transporter; C 99.8 1.4E-19 4.7E-24 150.5 13.8 120 235-376 24-146 (148)
16 3i8n_A Uncharacterized protein 99.8 1.6E-19 5.5E-24 146.8 12.9 121 235-376 7-130 (130)
17 3nqr_A Magnesium and cobalt ef 99.8 1E-19 3.4E-24 147.4 10.0 120 235-375 4-126 (127)
18 3kpb_A Uncharacterized protein 99.8 2.3E-19 7.8E-24 143.8 11.8 119 235-375 2-120 (122)
19 3hf7_A Uncharacterized CBS-dom 99.8 2.7E-19 9.1E-24 145.6 12.0 122 235-375 3-127 (130)
20 3lhh_A CBS domain protein; str 99.8 8E-19 2.7E-23 149.9 13.8 119 235-375 43-164 (172)
21 3jtf_A Magnesium and cobalt ef 99.8 3.5E-19 1.2E-23 144.6 10.5 118 235-375 6-126 (129)
22 2rih_A Conserved protein with 99.8 5.8E-19 2E-23 145.4 12.0 123 232-374 3-127 (141)
23 1pbj_A Hypothetical protein; s 99.8 1.4E-18 4.9E-23 139.7 13.1 120 236-375 3-122 (125)
24 2p9m_A Hypothetical protein MJ 99.8 2.3E-18 8E-23 141.0 14.3 122 235-375 9-136 (138)
25 3lfr_A Putative metal ION tran 99.8 2.2E-19 7.5E-24 147.2 8.1 121 235-375 4-127 (136)
26 2uv4_A 5'-AMP-activated protei 99.8 1.3E-18 4.3E-23 145.4 12.5 123 242-375 29-151 (152)
27 3oco_A Hemolysin-like protein 99.8 7.3E-19 2.5E-23 147.0 10.5 119 235-375 21-143 (153)
28 2o16_A Acetoin utilization pro 99.8 2.7E-18 9.1E-23 144.8 14.0 126 235-375 6-135 (160)
29 3gby_A Uncharacterized protein 99.8 5.2E-19 1.8E-23 143.3 9.1 121 235-375 6-126 (128)
30 2yzi_A Hypothetical protein PH 99.8 2.7E-18 9.1E-23 140.7 13.3 121 235-375 8-129 (138)
31 4gqw_A CBS domain-containing p 99.8 1.2E-18 4.2E-23 144.8 11.4 127 235-375 6-143 (152)
32 2ef7_A Hypothetical protein ST 99.8 2.3E-18 7.9E-23 140.2 12.5 121 235-375 5-125 (133)
33 2nyc_A Nuclear protein SNF4; b 99.8 2.9E-18 1E-22 141.3 13.2 126 239-375 16-141 (144)
34 3fv6_A YQZB protein; CBS domai 99.8 2.4E-18 8.3E-23 144.8 12.9 122 235-375 18-144 (159)
35 3k2v_A Putative D-arabinose 5- 99.8 1.8E-18 6.2E-23 143.9 11.9 118 235-371 29-148 (149)
36 3fhm_A Uncharacterized protein 99.8 1.6E-18 5.4E-23 146.9 11.7 123 235-375 25-150 (165)
37 3ctu_A CBS domain protein; str 99.8 1.1E-18 3.9E-23 146.2 10.5 125 235-375 16-142 (156)
38 1y5h_A Hypothetical protein RV 99.8 8.5E-19 2.9E-23 142.8 9.0 122 235-375 9-131 (133)
39 3lqn_A CBS domain protein; csg 99.8 3.6E-18 1.2E-22 142.1 11.7 125 235-375 16-143 (150)
40 2pfi_A Chloride channel protei 99.8 7E-18 2.4E-22 142.3 13.3 131 235-375 14-147 (164)
41 3sl7_A CBS domain-containing p 99.8 1.8E-18 6.1E-23 148.2 9.5 138 235-375 5-156 (180)
42 2rc3_A CBS domain; in SITU pro 99.8 5.6E-18 1.9E-22 138.3 11.9 122 235-375 7-131 (135)
43 1pvm_A Conserved hypothetical 99.8 5.4E-18 1.8E-22 146.2 12.2 124 234-374 9-132 (184)
44 4fry_A Putative signal-transdu 99.7 8.6E-18 2.9E-22 140.9 12.6 125 232-375 5-135 (157)
45 1o50_A CBS domain-containing p 99.7 1.5E-17 5E-22 139.7 13.6 125 235-375 17-153 (157)
46 2emq_A Hypothetical conserved 99.7 1.1E-17 3.9E-22 140.1 12.6 125 235-375 12-139 (157)
47 1yav_A Hypothetical protein BS 99.7 1E-17 3.5E-22 140.8 12.0 125 235-375 15-142 (159)
48 3ocm_A Putative membrane prote 99.7 2E-17 7E-22 141.3 12.8 118 235-375 37-157 (173)
49 3l2b_A Probable manganase-depe 99.7 4.6E-17 1.6E-21 146.9 14.9 199 147-373 10-242 (245)
50 4esy_A CBS domain containing m 99.7 8.6E-18 2.9E-22 143.1 9.4 135 147-290 21-160 (170)
51 3kxr_A Magnesium transporter, 99.7 4E-17 1.4E-21 143.4 12.8 117 234-374 54-173 (205)
52 3oi8_A Uncharacterized protein 99.7 1.4E-17 5E-22 139.7 9.6 114 235-370 39-155 (156)
53 1vr9_A CBS domain protein/ACT 99.7 2.4E-17 8.3E-22 145.7 11.1 120 231-374 10-129 (213)
54 2j9l_A Chloride channel protei 99.7 4E-17 1.4E-21 140.4 11.6 125 235-374 12-164 (185)
55 3kxr_A Magnesium transporter, 99.7 1.2E-16 4.2E-21 140.2 13.9 122 141-293 51-175 (205)
56 1vr9_A CBS domain protein/ACT 99.7 9.9E-17 3.4E-21 141.7 13.2 155 147-354 16-171 (213)
57 3k6e_A CBS domain protein; str 99.7 7.2E-17 2.5E-21 135.5 11.0 118 151-291 24-141 (156)
58 2d4z_A Chloride channel protei 99.7 1.7E-16 5.8E-21 143.1 13.9 140 234-375 13-246 (250)
59 3i8n_A Uncharacterized protein 99.7 1.4E-16 4.7E-21 129.3 12.0 119 146-291 8-128 (130)
60 3lv9_A Putative transporter; C 99.7 1.7E-16 5.9E-21 131.6 12.6 117 147-291 26-144 (148)
61 3lhh_A CBS domain protein; str 99.7 3.5E-16 1.2E-20 133.3 14.0 120 145-292 43-164 (172)
62 3kpb_A Uncharacterized protein 99.7 1.8E-16 6.2E-21 126.8 10.5 114 149-291 6-119 (122)
63 3nqr_A Magnesium and cobalt ef 99.7 1E-16 3.5E-21 129.5 8.0 115 149-290 8-124 (127)
64 3jtf_A Magnesium and cobalt ef 99.7 4E-16 1.4E-20 126.4 10.4 114 149-291 10-125 (129)
65 2oux_A Magnesium transporter; 99.7 3.6E-16 1.2E-20 144.4 11.2 117 234-374 137-258 (286)
66 3lfr_A Putative metal ION tran 99.7 1.6E-16 5.5E-21 130.0 7.8 117 149-291 8-126 (136)
67 3gby_A Uncharacterized protein 99.6 4E-16 1.4E-20 126.1 9.4 118 147-291 8-125 (128)
68 1pbj_A Hypothetical protein; s 99.6 6E-16 2.1E-20 124.2 10.3 117 149-292 6-122 (125)
69 2ef7_A Hypothetical protein ST 99.6 1.4E-15 4.8E-20 123.6 12.4 118 147-291 7-124 (133)
70 3oco_A Hemolysin-like protein 99.6 3.6E-16 1.2E-20 130.6 8.7 116 149-292 25-143 (153)
71 3hf7_A Uncharacterized CBS-dom 99.6 1.2E-15 4.1E-20 123.8 11.3 115 152-291 12-126 (130)
72 2yvy_A MGTE, Mg2+ transporter 99.6 7.8E-16 2.7E-20 141.6 11.4 118 234-375 135-257 (278)
73 2o16_A Acetoin utilization pro 99.6 1E-15 3.5E-20 128.8 11.1 127 147-291 8-134 (160)
74 4gqw_A CBS domain-containing p 99.6 3.4E-16 1.2E-20 129.9 8.1 133 147-291 8-142 (152)
75 3l2b_A Probable manganase-depe 99.6 3.7E-15 1.3E-19 134.3 15.4 211 48-290 7-242 (245)
76 3fv6_A YQZB protein; CBS domai 99.6 1.2E-15 4.1E-20 128.2 11.2 118 148-291 21-143 (159)
77 2p9m_A Hypothetical protein MJ 99.6 1.4E-15 4.7E-20 124.4 11.1 119 147-291 11-135 (138)
78 2yzi_A Hypothetical protein PH 99.6 2.4E-15 8.1E-20 123.0 12.5 120 147-292 10-129 (138)
79 1o50_A CBS domain-containing p 99.6 3.7E-15 1.3E-19 124.9 13.4 133 147-291 19-152 (157)
80 3lqn_A CBS domain protein; csg 99.6 8.8E-16 3E-20 127.5 9.5 122 149-292 20-143 (150)
81 3fhm_A Uncharacterized protein 99.6 3.5E-15 1.2E-19 126.1 13.1 116 152-292 35-150 (165)
82 3ocm_A Putative membrane prote 99.6 3.6E-15 1.2E-19 127.3 12.9 121 144-293 36-158 (173)
83 2rih_A Conserved protein with 99.6 4.7E-15 1.6E-19 121.8 13.1 119 147-290 8-126 (141)
84 3k2v_A Putative D-arabinose 5- 99.6 1.5E-15 5.3E-20 126.1 10.1 116 147-288 31-148 (149)
85 2uv4_A 5'-AMP-activated protei 99.6 4.9E-15 1.7E-19 123.4 12.8 115 152-290 29-149 (152)
86 1pvm_A Conserved hypothetical 99.6 3.3E-15 1.1E-19 128.7 12.1 121 147-291 12-132 (184)
87 3oi8_A Uncharacterized protein 99.6 4.5E-15 1.5E-19 124.4 12.4 114 146-287 40-155 (156)
88 2nyc_A Nuclear protein SNF4; b 99.6 3.1E-15 1E-19 123.0 11.0 119 149-291 16-140 (144)
89 2emq_A Hypothetical conserved 99.6 5.7E-15 1.9E-19 123.5 12.5 125 146-292 13-139 (157)
90 1y5h_A Hypothetical protein RV 99.6 5.7E-16 1.9E-20 125.9 6.2 116 149-290 13-129 (133)
91 3ctu_A CBS domain protein; str 99.6 1.7E-15 5.7E-20 126.7 8.9 121 149-292 20-142 (156)
92 2rc3_A CBS domain; in SITU pro 99.6 3.5E-15 1.2E-19 121.6 10.4 114 152-291 17-130 (135)
93 3pc3_A CG1753, isoform A; CBS, 99.6 3.9E-15 1.3E-19 148.9 12.2 123 234-375 384-511 (527)
94 2yvy_A MGTE, Mg2+ transporter 99.6 1.3E-14 4.4E-19 133.4 13.6 121 141-292 132-257 (278)
95 3sl7_A CBS domain-containing p 99.6 2.5E-15 8.4E-20 128.5 7.4 137 149-291 9-155 (180)
96 2oux_A Magnesium transporter; 99.6 1.1E-14 3.9E-19 134.3 12.0 121 141-292 134-259 (286)
97 4fry_A Putative signal-transdu 99.6 1.9E-14 6.6E-19 120.3 12.2 117 152-294 21-137 (157)
98 2d4z_A Chloride channel protei 99.6 3.3E-14 1.1E-18 128.1 13.7 141 146-291 15-245 (250)
99 1yav_A Hypothetical protein BS 99.6 9.5E-15 3.3E-19 122.6 9.3 122 149-292 19-142 (159)
100 2zy9_A Mg2+ transporter MGTE; 99.5 5.2E-14 1.8E-18 138.6 14.6 121 141-292 152-277 (473)
101 2pfi_A Chloride channel protei 99.5 3.3E-14 1.1E-18 119.5 11.2 124 149-292 18-147 (164)
102 2zy9_A Mg2+ transporter MGTE; 99.5 2E-14 6.7E-19 141.6 11.0 117 234-374 155-276 (473)
103 2j9l_A Chloride channel protei 99.5 2.6E-14 8.8E-19 122.7 10.0 134 154-292 25-165 (185)
104 3org_A CMCLC; transporter, tra 99.5 2.9E-15 9.8E-20 152.7 4.1 139 234-374 453-624 (632)
105 3usb_A Inosine-5'-monophosphat 99.5 1.3E-13 4.3E-18 136.7 13.2 114 238-374 117-233 (511)
106 1zfj_A Inosine monophosphate d 99.4 6.9E-13 2.3E-17 131.5 13.2 115 237-374 93-210 (491)
107 3usb_A Inosine-5'-monophosphat 99.4 3.1E-12 1.1E-16 126.7 15.8 156 149-354 118-276 (511)
108 3pc3_A CG1753, isoform A; CBS, 99.4 4E-13 1.4E-17 134.3 9.5 122 146-293 386-512 (527)
109 4fxs_A Inosine-5'-monophosphat 99.4 7.9E-14 2.7E-18 137.7 4.4 114 237-373 92-207 (496)
110 1me8_A Inosine-5'-monophosphat 99.4 3.3E-14 1.1E-18 141.0 0.1 113 240-374 103-220 (503)
111 1vrd_A Inosine-5'-monophosphat 99.4 4.3E-14 1.5E-18 140.3 0.2 116 236-374 97-214 (494)
112 4avf_A Inosine-5'-monophosphat 99.4 7.3E-14 2.5E-18 137.8 0.0 114 236-373 90-205 (490)
113 1me8_A Inosine-5'-monophosphat 99.3 1.6E-13 5.6E-18 136.0 0.2 166 150-363 103-270 (503)
114 3org_A CMCLC; transporter, tra 99.3 1.3E-12 4.5E-17 133.1 6.6 136 147-289 456-622 (632)
115 4af0_A Inosine-5'-monophosphat 99.3 2.4E-13 8.1E-18 131.7 0.1 109 240-372 144-255 (556)
116 1zfj_A Inosine monophosphate d 99.3 2.7E-11 9.1E-16 120.1 14.8 115 149-291 95-210 (491)
117 4af0_A Inosine-5'-monophosphat 99.3 9.7E-13 3.3E-17 127.4 2.6 113 150-290 144-256 (556)
118 4fxs_A Inosine-5'-monophosphat 99.2 3.5E-12 1.2E-16 125.9 4.4 112 149-290 94-207 (496)
119 1vrd_A Inosine-5'-monophosphat 99.2 4.9E-12 1.7E-16 125.5 3.4 113 149-291 100-214 (494)
120 1jcn_A Inosine monophosphate d 99.2 1.6E-13 5.5E-18 136.7 -7.3 117 236-373 110-231 (514)
121 2cu0_A Inosine-5'-monophosphat 99.2 2.4E-12 8E-17 127.3 0.2 109 239-373 98-206 (486)
122 4avf_A Inosine-5'-monophosphat 99.2 7.7E-12 2.6E-16 123.4 3.6 112 149-291 93-206 (490)
123 3ghd_A A cystathionine beta-sy 99.1 1.4E-10 4.8E-15 83.0 6.4 69 244-329 2-70 (70)
124 2cu0_A Inosine-5'-monophosphat 99.0 5.3E-11 1.8E-15 117.6 1.4 160 149-364 98-257 (486)
125 1jcn_A Inosine monophosphate d 99.0 1.6E-11 5.4E-16 122.3 -3.1 118 148-290 112-231 (514)
126 3fio_A A cystathionine beta-sy 98.8 7.2E-09 2.5E-13 73.7 6.4 49 243-292 1-49 (70)
127 3ghd_A A cystathionine beta-sy 98.8 1.3E-08 4.5E-13 72.6 7.5 47 326-374 2-48 (70)
128 3fio_A A cystathionine beta-sy 98.6 8.8E-08 3E-12 67.9 7.4 48 325-374 1-48 (70)
129 1tif_A IF3-N, translation init 60.3 17 0.00057 25.6 5.0 32 265-296 13-44 (78)
130 1tif_A IF3-N, translation init 43.4 36 0.0012 23.9 4.4 25 347-372 13-37 (78)
131 1svj_A Potassium-transporting 36.9 13 0.00044 30.0 1.5 35 335-371 121-155 (156)
132 2hje_A Autoinducer 2 sensor ki 27.1 37 0.0013 28.8 2.7 18 347-364 119-136 (221)
133 1p0z_A Sensor kinase CITA; tra 25.7 49 0.0017 25.1 3.1 17 267-283 105-121 (131)
134 3by8_A Sensor protein DCUS; hi 24.8 50 0.0017 25.5 3.1 18 267-284 110-127 (142)
135 2fwh_A Thiol:disulfide interch 22.9 85 0.0029 23.5 4.1 55 58-112 66-128 (134)
136 3k2t_A LMO2511 protein; lister 21.1 1.2E+02 0.0042 19.6 3.8 30 331-360 11-40 (57)
No 1
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=100.00 E-value=1.9e-43 Score=333.31 Aligned_cols=310 Identities=25% Similarity=0.442 Sum_probs=248.0
Q ss_pred CCHHHHHHHHHHHHHHhhhCCccccCCCCccEEEEcCCCCHHHHHHHHHHcCCCeeecccCCCCceeEEeeHHHHHHHHH
Q 017163 29 YSEADLQLSRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILR 108 (376)
Q Consensus 29 ~~~~~~~~~~~~~~~fl~~~~~~d~~p~~~~vi~l~~~~~v~~A~~~l~~~~i~~~PV~d~~~~~~vG~lt~~D~i~il~ 108 (376)
.-+++.....+++.+||+.++|||+||.+.++++++.+.|+.+|++.|.+++++++||||++.++++|++|..|++.++.
T Consensus 11 ~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~l~ 90 (323)
T 3t4n_C 11 KVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQ 90 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHHHHHH
Confidence 44566667889999999999999999999999999999999999999999999999999988778999999999999887
Q ss_pred HhccCCCCCCHHHHhhhhHHHHHHHHHhhhcccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCC
Q 017163 109 ELGTNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAG 188 (376)
Q Consensus 109 ~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g 188 (376)
+++..+.. .+.++.+....|++.....+ .|.++++++.+++++.+|++.|.+++++++||++++...+
T Consensus 91 ~~~~~~~~--~~~l~~~~~~~v~~i~~~~~----------~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~ 158 (323)
T 3t4n_C 91 YYFSNPDK--FELVDKLQLDGLKDIERALG----------VDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETH 158 (323)
T ss_dssp HHHHCGGG--GGGGGGCBHHHHHHHHHHTT----------C----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTC
T ss_pred HHHcCcch--hHHHHHHHHHHHHHHHHHhC----------CCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCC
Confidence 76553321 23445555556666554433 6788999999999999999999999999999998732222
Q ss_pred CcceEEEeeehhhHHHHHhhhccCCCCCccccccccccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEE
Q 017163 189 SCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSI 268 (376)
Q Consensus 189 ~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~l 268 (376)
.++++|++|.+|+++++..+... ......+++++.++ |.++++++.+++++.+|++.|.+++++++
T Consensus 159 -~~~l~Givt~~di~~~l~~~~~~----~~~~~~~v~~~~~~---------m~~~~~~v~~~~~~~~~~~~m~~~~~~~~ 224 (323)
T 3t4n_C 159 -REIVVSVLTQYRILKFVALNCRE----THFLKIPIGDLNII---------TQDNMKSCQMTTPVIDVIQMLTQGRVSSV 224 (323)
T ss_dssp -CEEEEEEEEHHHHHHHHHHHCGG----GGGCCSBGGGTTCS---------BCTTCCCBCTTSBHHHHHHHHHHHTCSEE
T ss_pred -ccceEEEecHHHHHHHHHhcCCc----hhhhhCcHHHcCCC---------CCCCcEEECCCCcHHHHHHHHHHcCCCEE
Confidence 11299999999999998765433 12233344333211 66789999999999999999999999999
Q ss_pred EEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCc
Q 017163 269 PIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVR 348 (376)
Q Consensus 269 pVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~ 348 (376)
||+|++|+++|++|.+|+++.+..+.+... +.++.+++..... ...++.+|.+++++.+|+++|.+++++
T Consensus 225 pVvd~~~~~~Giit~~dl~~~~~~~~~~~~---~~~v~~~m~~~~~-------~~~~~~~v~~~~~l~~~~~~m~~~~~~ 294 (323)
T 3t4n_C 225 PIIDENGYLINVYEAYDVLGLIKGGIYNDL---SLSVGEALMRRSD-------DFEGVYTCTKNDKLSTIMDNIRKARVH 294 (323)
T ss_dssp EEECTTCBEEEEEETTHHHHHHHTTHHHHT---TSBHHHHGGGSCT-------TCCCCEEECTTCBHHHHHHHHHHSCCC
T ss_pred EEECCCCeEEEEEeHHHHHHHHhhchhhhc---cCCHHHHHhhccc-------cCCCCEEECCCCCHHHHHHHHHHhCCC
Confidence 999999999999999999998775544333 4678885432110 002689999999999999999999999
Q ss_pred EEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 349 RLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 349 ~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
++|||| ++|+++|+||.+||++++++
T Consensus 295 ~l~Vvd-~~~~l~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 295 RFFVVD-DVGRLVGVLTLSDILKYILL 320 (323)
T ss_dssp EEEEEC-TTSBEEEEEEHHHHHHHHHH
T ss_pred EEEEEC-CCCcEEEEEEHHHHHHHHHh
Confidence 999999 47999999999999999975
No 2
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=100.00 E-value=5.8e-37 Score=290.29 Aligned_cols=307 Identities=22% Similarity=0.435 Sum_probs=238.0
Q ss_pred HHHHHHHHHHHHHHhhhCCccccCCCCccEEEEcCCCCHHHHHHHHHHcCCCeeecccCCCCceeEEeeHHHHHHHHHHh
Q 017163 31 EADLQLSRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILREL 110 (376)
Q Consensus 31 ~~~~~~~~~~~~~fl~~~~~~d~~p~~~~vi~l~~~~~v~~A~~~l~~~~i~~~PV~d~~~~~~vG~lt~~D~i~il~~~ 110 (376)
+.+.....+.+.+||+..+++|+|+.+.++++++.++|+.+|++.|.+++++++||||++.++++|+++..|++.++...
T Consensus 5 ~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~ 84 (334)
T 2qrd_G 5 QETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYY 84 (334)
T ss_dssp HHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHH
Confidence 34566688999999999999999999999999999999999999999999999999998777899999999999877654
Q ss_pred ccCCCCC-CHHHHhhhhHHHHHHHHHhhhcccccCCCCCCCCCCc--eEeCCCCCHHHHHHHHHhCCCceeEEEecCCCC
Q 017163 111 GTNGSNL-TEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPL--VQAGPYDSLKEVALKILQNKVATVPIIHSTGPA 187 (376)
Q Consensus 111 ~~~~~~~-~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~ 187 (376)
....... ..+.+....+..|.+.... +|..++ +++.+++++.+|++.|.+++++++||+|++ .
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~~~l~~------------im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~--~ 150 (334)
T 2qrd_G 85 YQSSSFPEAIAEIDKFRLLGLREVERK------------IGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVD--G 150 (334)
T ss_dssp HHHCSCGGGGGGGGSCBHHHHHHHHHH------------HTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEE--T
T ss_pred hhccCCccHHHHHhhhchhhHHHHHHh------------hccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCC--C
Confidence 3210000 0122334455566554432 344555 899999999999999999999999999762 1
Q ss_pred C-CcceEEEeeehhhHHHHHhhhccCCCCCccccccccccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCC
Q 017163 188 G-SCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVS 266 (376)
Q Consensus 188 g-~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~ 266 (376)
+ ..+.++|++|.+|+++++...... ......+++++ ..+|.+++.++.+++++.+|++.|.+++++
T Consensus 151 ~~~~~~~~Givt~~dl~~~~~~~~~~----~~~~~~~v~~l---------~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~ 217 (334)
T 2qrd_G 151 ETGSEMIVSVLTQYRILKFISMNCKE----TAMLRVPLNQM---------TIGTWSNLATASMETKVYDVIKMLAEKNIS 217 (334)
T ss_dssp TTTEEEEEEEEEHHHHHHHHHHHCGG----GGGCCCBGGGS---------SCSBCSSCCCBCTTSBHHHHHHHHHHHTCS
T ss_pred CcCccceEEEeeHHHHHHHHHhhccc----hhhhhCcHHHh---------CCcccCCceEECCCCcHHHHHHHHHHcCCc
Confidence 2 001299999999999988654221 01112223222 113778899999999999999999999999
Q ss_pred EEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCC
Q 017163 267 SIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPG 346 (376)
Q Consensus 267 ~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~ 346 (376)
++||+|++|+++|++|.+|++..+..+.+... +.++.+++..... . + .++.+|.+++++.+|++.|.+++
T Consensus 218 ~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~---~~~v~~~m~~~~~---~--~--~~~~~v~~~~~l~~~~~~m~~~~ 287 (334)
T 2qrd_G 218 AVPIVNSEGTLLNVYESVDVMHLIQDGDYSNL---DLSVGEALLKRPA---N--F--DGVHTCRATDRLDGIFDAIKHSR 287 (334)
T ss_dssp EEEEECTTCBEEEEEETHHHHHHHTTSCGGGG---GSBHHHHHTTCCT---T--C--CCCCEECTTCBHHHHHHHHHHSC
T ss_pred EEEEEcCCCcEEEEEEHHHHHHHhhccccccc---cCcHHHHHhcccc---c--C--CCCEEECCCCcHHHHHHHHHHcC
Confidence 99999989999999999999987765443222 3677774321000 0 0 37889999999999999999999
Q ss_pred CcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 347 VRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 347 ~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
++++|||| ++|+++|+||.+||++++..
T Consensus 288 ~~~l~Vvd-~~g~l~Giit~~dil~~~~~ 315 (334)
T 2qrd_G 288 VHRLFVVD-ENLKLEGILSLADILNYIIY 315 (334)
T ss_dssp CCEEEEEC-TTCBEEEEEEHHHHHHHHHS
T ss_pred CCEEEEEC-CCCeEEEEEeHHHHHHHHHh
Confidence 99999999 47999999999999999865
No 3
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=100.00 E-value=1.3e-36 Score=287.52 Aligned_cols=300 Identities=31% Similarity=0.544 Sum_probs=239.5
Q ss_pred HHHHHHHHHhhhCCccccCCCCccEEEEcCCCCHHHHHHHHHHcCCCeeecccCCCCceeEEeeHHHHHHHHHHhccCCC
Q 017163 36 LSRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGS 115 (376)
Q Consensus 36 ~~~~~~~~fl~~~~~~d~~p~~~~vi~l~~~~~v~~A~~~l~~~~i~~~PV~d~~~~~~vG~lt~~D~i~il~~~~~~~~ 115 (376)
..++.+..||+..+++|+|+.+.++++++.+.|+.+|++.|.+++++++||||.+.++++|++|..|++..+......+.
T Consensus 23 ~~~~~~~~~l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~ 102 (330)
T 2v8q_E 23 SNSSVYTTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSAL 102 (330)
T ss_dssp CCSCHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccc
Confidence 45778999999999999999999999999999999999999999999999999887789999999999987765431110
Q ss_pred CCCHHHHhhhhHHHHHHHHHhhhcccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEE
Q 017163 116 NLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILY 195 (376)
Q Consensus 116 ~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~g 195 (376)
....++....+..|.... +.+|.++++++.+++++.+|++.|.+++++++||+|+ ++| +++|
T Consensus 103 -~~~~~l~~~~~~~~~~~~------------~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--~~~---~~~G 164 (330)
T 2v8q_E 103 -VQIYELEEHKIETWREVY------------LQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDP--ESG---NTLY 164 (330)
T ss_dssp -TTCCCGGGCBHHHHHHHH------------SSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECT--TTC---CEEE
T ss_pred -cchhHHhhccHHHHHHHH------------hhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeC--CCC---cEEE
Confidence 011223344555554322 2368889999999999999999999999999999963 235 7999
Q ss_pred eeehhhHHHHHhhhccCCCCCccccccccccccccccccccccccC-CCceEecCCCCHHHHHHHHHhCCCCEEEEECCC
Q 017163 196 LASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANG-RPFAMLRPTASLGSALALLVQADVSSIPIVDDN 274 (376)
Q Consensus 196 iit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~i~~~~~~v~~~m~-~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~ 274 (376)
++|.+|+++++..+....+. ..+...+++++.+ |. +++.++.+++++.+|++.|.+++++++||+|++
T Consensus 165 ivt~~dl~~~~~~~~~~~~~-~~~~~~~v~~~~v----------~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~ 233 (330)
T 2v8q_E 165 ILTHKRILKFLKLFITEFPK-PEFMSKSLEELQI----------GTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEK 233 (330)
T ss_dssp EECHHHHHHHHHHHSCSSSC-CGGGGSBHHHHTC----------SBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTT
T ss_pred EEcHHHHHHHHHHHhhccCc-hhhhcCCHHHhcc----------cCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCC
Confidence 99999999988765432110 1122334444322 32 578899999999999999999999999999989
Q ss_pred CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEe
Q 017163 275 DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVE 354 (376)
Q Consensus 275 g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd 354 (376)
|+++|++|.+|++.....+.+... +.++.+++..+. .|..++.+|.+++++.+|+++|.+++++++||+|
T Consensus 234 ~~l~Giit~~dl~~~~~~~~~~~~---~~~v~~~~~~~~-------~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd 303 (330)
T 2v8q_E 234 GRVVDIYSKFDVINLAAEKTYNNL---DVSVTKALQHRS-------HYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVD 303 (330)
T ss_dssp SBEEEEEEGGGTGGGGGSSCCCCC---SSBHHHHGGGCC-------SCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CcEEEEEEHHHHHHHHhccccccc---cCcHHHHHhccc-------cccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEc
Confidence 999999999999986654433222 467888654322 4567899999999999999999999999999999
Q ss_pred CCCCeEEEEEeHHHHHHHHhc
Q 017163 355 AGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 355 ~~~~~~~GvIs~~Dil~~l~~ 375 (376)
++|+++|+||.+||++++..
T Consensus 304 -~~g~l~Giit~~Dil~~~~~ 323 (330)
T 2v8q_E 304 -EHDVVKGIVSLSDILQALVL 323 (330)
T ss_dssp -TTSBEEEEEEHHHHHHHHHS
T ss_pred -CCCcEEEEEeHHHHHHHHHh
Confidence 47999999999999999864
No 4
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=100.00 E-value=3.2e-34 Score=264.18 Aligned_cols=270 Identities=14% Similarity=0.279 Sum_probs=209.3
Q ss_pred CccccCCCCccEEEEcCCCCHHHHHHHHHHcCCCeeecccCCCCceeEEeeHHHHHHHHHHhccCCCCCCHHHHhhhhHH
Q 017163 49 TVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTIS 128 (376)
Q Consensus 49 ~~~d~~p~~~~vi~l~~~~~v~~A~~~l~~~~i~~~PV~d~~~~~~vG~lt~~D~i~il~~~~~~~~~~~~~~l~~~~i~ 128 (376)
++.+.+.. .++++++.+.|+.+|++.|.+++++++||+|++.++++|++|..|++.++..... ...+......
T Consensus 4 ~v~~~i~~-~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~------~~~~~~~~~~ 76 (280)
T 3kh5_A 4 RVMKIAQN-KKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSK------YNLIREKHER 76 (280)
T ss_dssp BGGGTSCC-SCCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGG------GHHHHTTSTT
T ss_pred hHHHHhcC-CCcEEECCCCcHHHHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccch------hhhhhhcccc
Confidence 34455554 3799999999999999999999999999999866789999999999976532111 0000000000
Q ss_pred HHHHHHHhhhcccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhh
Q 017163 129 AWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICR 208 (376)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~ 208 (376)
.+.. .....++.+|.++++++.+++++.+|++.|.+++++++||+|+ +| +++|++|.+|+++++..
T Consensus 77 ~~~~--------~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~ 142 (280)
T 3kh5_A 77 NFLA--------AINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVND---EN---QLISLITERDVIRALLD 142 (280)
T ss_dssp CHHH--------HTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECT---TC---BEEEEEEHHHHHHHHGG
T ss_pred chhH--------HhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcC---CC---EEEEEEEHHHHHHHHhh
Confidence 0000 0011234578889999999999999999999999999999975 56 89999999999987754
Q ss_pred hccCCCCCccccccccccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHH
Q 017163 209 HFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA 288 (376)
Q Consensus 209 ~~~~~~~~~~~~~~~i~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~ 288 (376)
.... . ..++++|.+++.++.+++++.+|++.|.+++++++||+ ++|+++|++|.+|++.
T Consensus 143 ~~~~--------~------------~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~ 201 (280)
T 3kh5_A 143 KIDE--------N------------EVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIK 201 (280)
T ss_dssp GSCT--------T------------CBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHH
T ss_pred cCCC--------C------------CCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHH
Confidence 3211 1 13455688889999999999999999999999999999 6899999999999998
Q ss_pred HHhccccc-ccc------cccccHHHHHhcCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEE
Q 017163 289 LAKDKAYA-QIH------LDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVE 361 (376)
Q Consensus 289 ~~~~~~~~-~~~------~~~~~v~~~l~~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~ 361 (376)
....+... ... ..+.++.+ +|.+++.+|.+++++.+|++.|.+++++++||+| ++|+++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~v~~-------------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~~g~~~ 267 (280)
T 3kh5_A 202 LLGSDWAFNHMQTGNVREITNVRMEE-------------IMKRDVITAKEGDKLKKIAEIMVTNDIGALPVVD-ENLRIK 267 (280)
T ss_dssp HHTSHHHHHHHHSCCTHHHHHCBHHH-------------HSBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEEC-TTCBEE
T ss_pred HHhhhhhhhhhcccchhhhhCCcHHH-------------HhcCCCEEECCCCCHHHHHHHHHHCCCCEEEEEC-CCCeEE
Confidence 76532210 000 01234444 7778899999999999999999999999999999 478999
Q ss_pred EEEeHHHHHHHHh
Q 017163 362 GIISLSDVFRFLL 374 (376)
Q Consensus 362 GvIs~~Dil~~l~ 374 (376)
|+||.+||++++.
T Consensus 268 Givt~~dil~~la 280 (280)
T 3kh5_A 268 GIITEKDVLKYFA 280 (280)
T ss_dssp EEEEHHHHGGGGC
T ss_pred EEEeHHHHHHhhC
Confidence 9999999998863
No 5
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=100.00 E-value=1.3e-33 Score=262.76 Aligned_cols=264 Identities=10% Similarity=0.103 Sum_probs=210.3
Q ss_pred hCCccccCCCCccEEEEcCCCCHHHHHHHHHHcCCCeeecccCCCCceeEEeeHHHHHHHHHHhccCCCCCCHHHHhhhh
Q 017163 47 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 126 (376)
Q Consensus 47 ~~~~~d~~p~~~~vi~l~~~~~v~~A~~~l~~~~i~~~PV~d~~~~~~vG~lt~~D~i~il~~~~~~~~~~~~~~l~~~~ 126 (376)
..++.|+|. .++++++.+.|+.+|++.|.++++.++||+| ++++|++|..|++..+...... ...
T Consensus 19 ~~~V~dim~--~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d---~~l~GivT~~Di~~~~~~~~~~----------~~~ 83 (296)
T 3ddj_A 19 GMNIETLMI--KNPPILSKEDRLGSAFKKINEGGIGRIIVAN---EKIEGLLTTRDLLSTVESYCKD----------SCS 83 (296)
T ss_dssp CSSGGGTCE--ESCCEECTTSBHHHHHHHTTGGGCCEEEEES---SSEEEEEEHHHHHGGGTTCC-------------CC
T ss_pred ccCHHHhcc--CCCcEECCCccHHHHHHHHHHCCCceEEEEC---CeEEEEEeHHHHHHHhcccccc----------ccc
Confidence 356778884 4799999999999999999999999999999 6799999999999765322110 000
Q ss_pred HHHHHHHHHhhhcccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHH
Q 017163 127 ISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 206 (376)
Q Consensus 127 i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l 206 (376)
...+... ....++.+|.++++++.+++++.+|+++|.+++++++||+|+ +| +++|++|..|+++++
T Consensus 84 ~~~~~~~--------~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~---~~---~lvGivt~~dl~~~~ 149 (296)
T 3ddj_A 84 QGDLYHI--------STTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDI---ND---KPVGIVTEREFLLLY 149 (296)
T ss_dssp HHHHHHH--------HTSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHGGGG
T ss_pred chhhHHH--------hcccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHhh
Confidence 1111110 011234478889999999999999999999999999999975 56 899999999999865
Q ss_pred hhhccCCCCCccccccccccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHH
Q 017163 207 CRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDI 286 (376)
Q Consensus 207 ~~~~~~~~~~~~~~~~~i~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di 286 (376)
..... . ..++++|.+++.++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+
T Consensus 150 ~~~~~---------~------------~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl 208 (296)
T 3ddj_A 150 KDLDE---------I------------FPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNA 208 (296)
T ss_dssp GGSCC---------C------------CBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHH
T ss_pred hcccc---------c------------ccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHH
Confidence 42211 1 23555688889999999999999999999999999999999999999999999
Q ss_pred HHHHhcccccccc---cccccHHHHHhcCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEE
Q 017163 287 TALAKDKAYAQIH---LDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGI 363 (376)
Q Consensus 287 ~~~~~~~~~~~~~---~~~~~v~~~l~~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~Gv 363 (376)
+..+... +..+. ..+.++.+ +|..++.+|.+++++.+|++.|.+++++++||+| ++|+++|+
T Consensus 209 ~~~~~~~-~~~~~~~~~~~~~v~~-------------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~~g~~~Gi 273 (296)
T 3ddj_A 209 IKQLAKA-VDKLDPDYFYGKVVKD-------------VMVTNLVTIDELASVNRAAAEMIVKRIGSLLILN-KDNTIRGI 273 (296)
T ss_dssp HHHHHHH-HHHTCTHHHHTCBHHH-------------HSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEEC-TTSCEEEE
T ss_pred HHHHHHH-HhhcChhhhcCcCHHH-------------HhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEC-CCCeEEEE
Confidence 9876522 11110 01345555 7778899999999999999999999999999999 47999999
Q ss_pred EeHHHHHHHHhc
Q 017163 364 ISLSDVFRFLLG 375 (376)
Q Consensus 364 Is~~Dil~~l~~ 375 (376)
||.+||++++.+
T Consensus 274 it~~Dil~~l~~ 285 (296)
T 3ddj_A 274 ITERDLLIALHH 285 (296)
T ss_dssp EEHHHHHHHHHH
T ss_pred EcHHHHHHHHHH
Confidence 999999999864
No 6
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.97 E-value=7.4e-31 Score=242.15 Aligned_cols=257 Identities=16% Similarity=0.230 Sum_probs=179.4
Q ss_pred ccEEEEcCCCCHHHHHHHHHHcCCCeeecccCCCCceeEEeeHHHHHHHHHHhccCCCCCCHHHHhhhhHHHHHHHHHhh
Q 017163 58 GKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISAWKVGKLQL 137 (376)
Q Consensus 58 ~~vi~l~~~~~v~~A~~~l~~~~i~~~PV~d~~~~~~vG~lt~~D~i~il~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~ 137 (376)
.++++++.+.|+.+|++.|.++++..+||+|++ ++++|++|..|++..+. .. .
T Consensus 9 ~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~-~~~~Giv~~~dl~~~~~-------~~--------~----------- 61 (282)
T 2yzq_A 9 QNPVTITLPATRNYALELFKKYKVRSFPVVNKE-GKLVGIISVKRILVNPD-------EE--------Q----------- 61 (282)
T ss_dssp ESCCCEESSCC------------CCEEEEECTT-CCEEEEEESSCC----------------------------------
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCeEEEEcCC-CcEEEEEEHHHHHhhhc-------cC--------C-----------
Confidence 468889999999999999999999999999974 67999999999874221 00 0
Q ss_pred hcccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHH-HHhhhccCCCCC
Q 017163 138 NLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK-CICRHFKHSSSS 216 (376)
Q Consensus 138 ~~~~~~~~~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~-~l~~~~~~~~~~ 216 (376)
++.+|.++++++.+++++.+|++.|.+++++++||+|+ +| +++|++|..|+++ ++....
T Consensus 62 --------v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~---~~---~~~Giit~~di~~~~~~~~~------ 121 (282)
T 2yzq_A 62 --------LAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDS---KG---KPVGILTVGDIIRRYFAKSE------ 121 (282)
T ss_dssp ----------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHTTTTCS------
T ss_pred --------HHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---EEEEEEEHHHHHHHHHhccC------
Confidence 12356677899999999999999999999999999975 46 8999999999998 654310
Q ss_pred ccccccccccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHH------HHH
Q 017163 217 LPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDIT------ALA 290 (376)
Q Consensus 217 ~~~~~~~i~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~------~~~ 290 (376)
.... ..++++|.+++.++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++ +..
T Consensus 122 -~~~~------------~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~ 188 (282)
T 2yzq_A 122 -KYKG------------VEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIM 188 (282)
T ss_dssp -GGGG------------CBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC--
T ss_pred -Cccc------------CcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhh
Confidence 0011 234556888899999999999999999999999999999899999999999998 322
Q ss_pred hccc--ccc-ccc-ccccHHHHHhc--CCCCCCCc-ccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEE
Q 017163 291 KDKA--YAQ-IHL-DEMNIHQALQL--GQDANPSL-GFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGI 363 (376)
Q Consensus 291 ~~~~--~~~-~~~-~~~~v~~~l~~--~~~~~~~~-~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~Gv 363 (376)
.... ... ..+ .......+... ......+. ++|.+++.+|.+++++.+|+++|.+++++++||+| ++|+++|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~lvGi 267 (282)
T 2yzq_A 189 KSTELAASSEEEWILESHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIR-GEGDLIGL 267 (282)
T ss_dssp ------------------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTTEEEEE
T ss_pred ccchhhhhhhhhhhcccchHHHHhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEEC-CCCCEEEE
Confidence 1000 000 000 00000000000 00011122 28889999999999999999999999999999999 46899999
Q ss_pred EeHHHHHHHHhc
Q 017163 364 ISLSDVFRFLLG 375 (376)
Q Consensus 364 Is~~Dil~~l~~ 375 (376)
||.+||++++..
T Consensus 268 it~~Dil~~~~~ 279 (282)
T 2yzq_A 268 IRDFDLLKVLVK 279 (282)
T ss_dssp EEHHHHGGGGCC
T ss_pred EeHHHHHHHHHh
Confidence 999999998753
No 7
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.93 E-value=1.4e-24 Score=199.66 Aligned_cols=195 Identities=18% Similarity=0.330 Sum_probs=157.8
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccc-ccccc
Q 017163 149 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQ-PVSSI 227 (376)
Q Consensus 149 ~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~-~i~~l 227 (376)
+|.++++++.+++++.+|+++|.+++++++||+++ ++| +++|++|.+|+++++...... ..+.. ....+
T Consensus 9 i~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~--~~~---~~~Givt~~di~~~~~~~~~~-----~~~~~~~~~~~ 78 (280)
T 3kh5_A 9 AQNKKIVTVYPTTTIRKALMTMNENKYRRLPVVNA--GNN---KVVGIITSMDIVDFMGGGSKY-----NLIREKHERNF 78 (280)
T ss_dssp SCCSCCCCBCTTSBHHHHHHHHHHHCCCEEEEECT--TTC---BEEEEEEHHHHHHHTTTSGGG-----HHHHTTSTTCH
T ss_pred hcCCCcEEECCCCcHHHHHHHHHhCCCcEeeEEEC--CCC---eEEEEEEHHHHHHHhcccchh-----hhhhhccccch
Confidence 67889999999999999999999999999999963 346 899999999999977432111 00000 00000
Q ss_pred cccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHH
Q 017163 228 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQ 307 (376)
Q Consensus 228 ~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~ 307 (376)
......+++++|.++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++........ ..++.+
T Consensus 79 -~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~-----~~~v~~ 152 (280)
T 3kh5_A 79 -LAAINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKIDE-----NEVIDD 152 (280)
T ss_dssp -HHHTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGSCT-----TCBSGG
T ss_pred -hHHhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcCCC-----CCCHHH
Confidence 11123467788999999999999999999999999999999999999999999999999876543221 124444
Q ss_pred HHhcCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHh
Q 017163 308 ALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 374 (376)
Q Consensus 308 ~l~~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~ 374 (376)
+|.+++.++.+++++.+|++.|.+++++++||++ +|+++|+||..|+++++.
T Consensus 153 -------------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~--~~~~~Givt~~dl~~~~~ 204 (280)
T 3kh5_A 153 -------------YITRDVIVATPGERLKDVARTMVRNGFRRLPVVS--EGRLVGIITSTDFIKLLG 204 (280)
T ss_dssp -------------GCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHT
T ss_pred -------------HhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHh
Confidence 7778899999999999999999999999999996 399999999999999874
No 8
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.91 E-value=3.4e-24 Score=199.09 Aligned_cols=192 Identities=18% Similarity=0.205 Sum_probs=158.5
Q ss_pred CCCCCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCccccccccc
Q 017163 146 NGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVS 225 (376)
Q Consensus 146 ~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~ 225 (376)
++++|.++++++.+++++.+|++.|.+++++++||++ + +++|++|..||++++...... ....+
T Consensus 22 V~dim~~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d-----~---~l~GivT~~Di~~~~~~~~~~--------~~~~~ 85 (296)
T 3ddj_A 22 IETLMIKNPPILSKEDRLGSAFKKINEGGIGRIIVAN-----E---KIEGLLTTRDLLSTVESYCKD--------SCSQG 85 (296)
T ss_dssp GGGTCEESCCEECTTSBHHHHHHHTTGGGCCEEEEES-----S---SEEEEEEHHHHHGGGTTCC-----------CCHH
T ss_pred HHHhccCCCcEECCCccHHHHHHHHHHCCCceEEEEC-----C---eEEEEEeHHHHHHHhcccccc--------cccch
Confidence 4568888999999999999999999999999999994 4 899999999999977432211 01111
Q ss_pred cccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccH
Q 017163 226 SIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNI 305 (376)
Q Consensus 226 ~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v 305 (376)
.+ +.....+++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|++........ ..++
T Consensus 86 ~~-~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~~~~~------~~~v 158 (296)
T 3ddj_A 86 DL-YHISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKDLDE------IFPV 158 (296)
T ss_dssp HH-HHHHTSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGGGSCC------CCBH
T ss_pred hh-HHHhcccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhhcccc------cccH
Confidence 11 0011235677798899999999999999999999999999999999999999999999875542211 3577
Q ss_pred HHHHhcCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHh
Q 017163 306 HQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 374 (376)
Q Consensus 306 ~~~l~~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~ 374 (376)
.+ +|.+++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..|+++++.
T Consensus 159 ~~-------------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 159 KV-------------FMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVID-DDNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp HH-------------HSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHH
T ss_pred HH-------------hhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEc-CCCEEEEEEEHHHHHHHHH
Confidence 77 6777899999999999999999999999999999 4799999999999999874
No 9
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.88 E-value=1.2e-22 Score=191.71 Aligned_cols=206 Identities=17% Similarity=0.249 Sum_probs=160.0
Q ss_pred CCC--CCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCccccccccc
Q 017163 148 RPC--PRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVS 225 (376)
Q Consensus 148 ~~~--~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~ 225 (376)
++| ..+++++++++++.+|++.|.+++++++||+++ +.+ +++|++|.+|++.++...+.... .....+.
T Consensus 39 dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~--~~~---~~vGivt~~Dll~~l~~~~~~~~----~~~~~l~ 109 (330)
T 2v8q_E 39 DLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDS--KKQ---SFVGMLTITDFINILHRYYKSAL----VQIYELE 109 (330)
T ss_dssp GGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEET--TTT---EEEEEEEHHHHHHHHHHHHHHHT----TTCCCGG
T ss_pred hhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeC--CCC---eEEEEEEHHHHHHHHHHHHhccc----cchhHHh
Confidence 367 678999999999999999999999999999976 225 79999999999998765431100 0011122
Q ss_pred cccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECC-CCcEEEEEeHHHHHHHHhccccc--cccccc
Q 017163 226 SIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDD-NDSLLDIYSRSDITALAKDKAYA--QIHLDE 302 (376)
Q Consensus 226 ~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~-~g~lvGiis~~Di~~~~~~~~~~--~~~~~~ 302 (376)
...+..|...++++|.++++++.+++++.+|++.|.+++++++||+|+ +|+++|++|.+|++.....+... ...+..
T Consensus 110 ~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~ 189 (330)
T 2v8q_E 110 EHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPEFMS 189 (330)
T ss_dssp GCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSCSSSCCGGGG
T ss_pred hccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhhccCchhhhc
Confidence 233334444566789999999999999999999999999999999998 89999999999999866532111 000112
Q ss_pred ccHHHHHhcCCCCCCCcccCC-CcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHh
Q 017163 303 MNIHQALQLGQDANPSLGFNG-QRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 374 (376)
Q Consensus 303 ~~v~~~l~~~~~~~~~~~im~-~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~ 374 (376)
.++.+. .+|. .++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..|+++++.
T Consensus 190 ~~v~~~-----------~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~~~l~Giit~~dl~~~~~ 250 (330)
T 2v8q_E 190 KSLEEL-----------QIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVD-EKGRVVDIYSKFDVINLAA 250 (330)
T ss_dssp SBHHHH-----------TCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEEC-TTSBEEEEEEGGGTGGGGG
T ss_pred CCHHHh-----------cccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEEC-CCCcEEEEEEHHHHHHHHh
Confidence 344441 0344 6788999999999999999999999999999 4799999999999998764
No 10
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.88 E-value=2.8e-22 Score=188.41 Aligned_cols=200 Identities=17% Similarity=0.266 Sum_probs=152.0
Q ss_pred CCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccccccc
Q 017163 151 PRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLG 230 (376)
Q Consensus 151 ~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~i~ 230 (376)
..+++.++.++++.+|++.|.+++++++||+++ +.+ +++|++|..|++.++...+..... ...+......
T Consensus 39 ~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~--~~~---~lvGilt~~Dl~~~l~~~~~~~~~-----~~~l~~~~~~ 108 (323)
T 3t4n_C 39 SYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDS--KTS---RFAGLLTTTDFINVIQYYFSNPDK-----FELVDKLQLD 108 (323)
T ss_dssp EEEEEEEETTSBHHHHHHHHHHTTCSCEEEEET--TTT---EEEEEECHHHHHHHHHHHHHCGGG-----GGGGGGCBHH
T ss_pred CCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeC--CCC---eEEEEEEHHHHHHHHHHHHcCcch-----hHHHHHHHHH
Confidence 356889999999999999999999999999975 345 899999999999987644322110 0011111111
Q ss_pred ccc--cccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCc-----EEEEEeHHHHHHHHhcccccccccccc
Q 017163 231 TWV--PRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDS-----LLDIYSRSDITALAKDKAYAQIHLDEM 303 (376)
Q Consensus 231 ~~~--~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~-----lvGiis~~Di~~~~~~~~~~~~~~~~~ 303 (376)
.+. .++.++|.++++++.+++++.+|++.|.+++++++||+|+++. ++|++|.+|++..+...... ..+.+.
T Consensus 109 ~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~-~~~~~~ 187 (323)
T 3t4n_C 109 GLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRE-THFLKI 187 (323)
T ss_dssp HHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGG-GGGCCS
T ss_pred HHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCc-hhhhhC
Confidence 111 1234556788999999999999999999999999999998775 99999999999866532211 111134
Q ss_pred cHHHHHhcCCCCCCCccc---CCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 304 NIHQALQLGQDANPSLGF---NGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 304 ~v~~~l~~~~~~~~~~~i---m~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
++.+ + |..++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..|+++++.+
T Consensus 188 ~v~~-------------~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd-~~~~~~Giit~~dl~~~~~~ 248 (323)
T 3t4n_C 188 PIGD-------------LNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIID-ENGYLINVYEAYDVLGLIKG 248 (323)
T ss_dssp BGGG-------------TTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEEC-TTCBEEEEEETTHHHHHHHT
T ss_pred cHHH-------------cCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEEC-CCCeEEEEEeHHHHHHHHhh
Confidence 5555 4 778899999999999999999999999999999 47999999999999998753
No 11
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.87 E-value=4.4e-22 Score=183.25 Aligned_cols=173 Identities=16% Similarity=0.230 Sum_probs=130.9
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccccc
Q 017163 149 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 228 (376)
Q Consensus 149 ~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 228 (376)
+|.++++++.+++++.+|+++|.+++++++||+++ +| +++|+++..|+++.+. .
T Consensus 6 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~---~~---~~~Giv~~~dl~~~~~-------------~------- 59 (282)
T 2yzq_A 6 IMTQNPVTITLPATRNYALELFKKYKVRSFPVVNK---EG---KLVGIISVKRILVNPD-------------E------- 59 (282)
T ss_dssp HSEESCCCEESSCC------------CCEEEEECT---TC---CEEEEEESSCC--------------------------
T ss_pred hccCCCeEECCCCcHHHHHHHHHHcCCCeEEEEcC---CC---cEEEEEEHHHHHhhhc-------------c-------
Confidence 46678899999999999999999999999999975 56 8999999999986321 1
Q ss_pred ccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHH-HHhcccccccccccccHHH
Q 017163 229 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA-LAKDKAYAQIHLDEMNIHQ 307 (376)
Q Consensus 229 i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~-~~~~~~~~~~~~~~~~v~~ 307 (376)
..++++|.+++.++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+.+ .+..+... .+.++.+
T Consensus 60 -----~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~~~~----~~~~v~~ 130 (282)
T 2yzq_A 60 -----EQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSEKY----KGVEIEP 130 (282)
T ss_dssp ---------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCSGG----GGCBSTT
T ss_pred -----CCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhccCCc----ccCcHHH
Confidence 1344557778899999999999999999999999999998899999999999988 55432110 0233333
Q ss_pred HHhcCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHH
Q 017163 308 ALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVF 370 (376)
Q Consensus 308 ~l~~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil 370 (376)
+|..++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..|++
T Consensus 131 -------------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd-~~~~~~Giit~~dl~ 179 (282)
T 2yzq_A 131 -------------YYQRYVSIVWEGTPLKAALKALLLSNSMALPVVD-SEGNLVGIVDETDLL 179 (282)
T ss_dssp -------------TSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEEC-TTSCEEEEEEGGGGG
T ss_pred -------------HhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEc-CCCeEEEEEEHHHHh
Confidence 7777899999999999999999999999999999 469999999999998
No 12
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.86 E-value=2.2e-21 Score=183.21 Aligned_cols=208 Identities=14% Similarity=0.148 Sum_probs=152.8
Q ss_pred CCC--CCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccc
Q 017163 149 PCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 226 (376)
Q Consensus 149 ~~~--~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~ 226 (376)
+|. .+++++++++++.+|++.|.+++++++||++. +.+ +++|+++.+|++.++......... .. ....+..
T Consensus 27 im~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~--~~~---~~vGiv~~~Dl~~~~~~~~~~~~~-~~-~~~~~~~ 99 (334)
T 2qrd_G 27 VLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDS--EAN---KFAGLLTMADFVNVIKYYYQSSSF-PE-AIAEIDK 99 (334)
T ss_dssp GSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEET--TTT---EEEEEECHHHHHHHHHHHHHHCSC-GG-GGGGGGS
T ss_pred hCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeC--CCC---eEEEEEEHHHHHHHHHHHhhccCC-cc-HHHHHhh
Confidence 564 35889999999999999999999999999975 236 899999999999877543211000 00 0001111
Q ss_pred ccccccccccccccCCCc--eEecCCCCHHHHHHHHHhCCCCEEEEECCCCc-----EEEEEeHHHHHHHHhcccccccc
Q 017163 227 IQLGTWVPRIGEANGRPF--AMLRPTASLGSALALLVQADVSSIPIVDDNDS-----LLDIYSRSDITALAKDKAYAQIH 299 (376)
Q Consensus 227 l~i~~~~~~v~~~m~~~~--~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~-----lvGiis~~Di~~~~~~~~~~~~~ 299 (376)
.++..+....+++|.+++ +++.+++++.+|++.|.+++++++||+|++|. ++|++|.+|++.....+... ..
T Consensus 100 ~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~~-~~ 178 (334)
T 2qrd_G 100 FRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKE-TA 178 (334)
T ss_dssp CBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCGG-GG
T ss_pred hchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhccc-hh
Confidence 111112112234466666 89999999999999999999999999997654 99999999999866532211 11
Q ss_pred cccccHHHHHhcCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 300 LDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 300 ~~~~~v~~~l~~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+...++.+. . .+|..++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..|+++++.+
T Consensus 179 ~~~~~v~~l---------~-~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd-~~~~~~Giit~~dl~~~~~~ 243 (334)
T 2qrd_G 179 MLRVPLNQM---------T-IGTWSNLATASMETKVYDVIKMLAEKNISAVPIVN-SEGTLLNVYESVDVMHLIQD 243 (334)
T ss_dssp GCCCBGGGS---------S-CSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEC-TTCBEEEEEETHHHHHHHTT
T ss_pred hhhCcHHHh---------C-CcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEc-CCCcEEEEEEHHHHHHHhhc
Confidence 112344430 0 03778899999999999999999999999999999 47999999999999998753
No 13
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.86 E-value=5.8e-22 Score=169.09 Aligned_cols=137 Identities=17% Similarity=0.284 Sum_probs=105.5
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccc------cccccccHHHH
Q 017163 235 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQ------IHLDEMNIHQA 308 (376)
Q Consensus 235 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~------~~~~~~~v~~~ 308 (376)
+|+++|+++++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|+++......... ...........
T Consensus 19 ~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (170)
T 4esy_A 19 PIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIPAPEVEHL 98 (170)
T ss_dssp BGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHHHHHHH
T ss_pred CHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccchhhHHhh
Confidence 467779999999999999999999999999999999999999999999999976432211100 00000000010
Q ss_pred HhcCCCCCCCc-ccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 309 LQLGQDANPSL-GFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 309 l~~~~~~~~~~-~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
.... ...+. .+|++++++|++++++.+|++.|.+++++++||+|+ |+++|+||.+||+++|+.
T Consensus 99 ~~~~--~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~--g~lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 99 FETG--RKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQD--GVPVGIVTRRDLLKLLLL 162 (170)
T ss_dssp HHHH--TTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHTTTSCC
T ss_pred hccc--cccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEEC--CEEEEEEEHHHHHHHHHh
Confidence 0000 01111 289999999999999999999999999999999994 999999999999998864
No 14
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.82 E-value=4.4e-20 Score=155.25 Aligned_cols=123 Identities=18% Similarity=0.257 Sum_probs=101.5
Q ss_pred cccccC--CCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCC
Q 017163 236 IGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQ 313 (376)
Q Consensus 236 v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~ 313 (376)
++++|. .+++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|+++...........+.+.++.+
T Consensus 17 ~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~------ 90 (156)
T 3k6e_A 17 EETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVH------ 90 (156)
T ss_dssp GGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGG------
T ss_pred HHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHH------
Confidence 344464 478999999999999999999999999999999999999999999986654333222122344444
Q ss_pred CCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHh
Q 017163 314 DANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 374 (376)
Q Consensus 314 ~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~ 374 (376)
+|.+++.++.+++++.+|++.|.+++ .+|||| ++|+++|+||.+||++++.
T Consensus 91 -------im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd-~~g~l~GiiT~~Dil~~~~ 141 (156)
T 3k6e_A 91 -------MTKTDVAVVSPDFTITEVLHKLVDES--FLPVVD-AEGIFQGIITRKSILKAVN 141 (156)
T ss_dssp -------TCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred -------hhcCCceecccccHHHHHHHHHHHcC--CeEEEe-cCCEEEEEEEHHHHHHHHH
Confidence 88889999999999999999999876 499999 5799999999999999884
No 15
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.82 E-value=1.4e-19 Score=150.50 Aligned_cols=120 Identities=16% Similarity=0.297 Sum_probs=106.6
Q ss_pred ccccccCC--CceEecCCCCHHHHHHHHHhCCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 017163 235 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 311 (376)
Q Consensus 235 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~-g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 311 (376)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|++.....+. +.++.+
T Consensus 24 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~---- 92 (148)
T 3lv9_A 24 KIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN-------KIELEE---- 92 (148)
T ss_dssp BGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-------CCCGGG----
T ss_pred CHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC-------CccHHH----
Confidence 56777887 89999999999999999999999999999987 89999999999998654332 245555
Q ss_pred CCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhcC
Q 017163 312 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLGV 376 (376)
Q Consensus 312 ~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~~ 376 (376)
+| +++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..|+++++++.
T Consensus 93 ---------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd-~~g~~~Giit~~dil~~l~~~ 146 (148)
T 3lv9_A 93 ---------IL-RDIIYISENLTIDKALERIRKEKLQLAIVVD-EYGGTSGVVTIEDILEEIVGE 146 (148)
T ss_dssp ---------TC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEEC-TTSSEEEEEEHHHHHHHHHHT
T ss_pred ---------hc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHHhCc
Confidence 77 7899999999999999999999999999999 579999999999999999863
No 16
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.81 E-value=1.6e-19 Score=146.75 Aligned_cols=121 Identities=15% Similarity=0.263 Sum_probs=105.9
Q ss_pred ccccccC--CCceEecCCCCHHHHHHHHHhCCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 017163 235 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 311 (376)
Q Consensus 235 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~-g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 311 (376)
+++++|. ..++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|++.....+.. +.++.+
T Consensus 7 ~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~------~~~v~~---- 76 (130)
T 3i8n_A 7 PVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSG------QKQLGA---- 76 (130)
T ss_dssp CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTT------TSBHHH----
T ss_pred CHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCC------cCCHHH----
Confidence 4667787 457799999999999999999999999999987 999999999999987654321 356777
Q ss_pred CCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhcC
Q 017163 312 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLGV 376 (376)
Q Consensus 312 ~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~~ 376 (376)
+| +++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..|+++++++.
T Consensus 77 ---------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~g~~vGivt~~dil~~l~ge 130 (130)
T 3i8n_A 77 ---------VM-RPIQVVLNNTALPKVFDQMMTHRLQLALVVD-EYGTVLGLVTLEDIFEHLVGE 130 (130)
T ss_dssp ---------HS-EECCEEETTSCHHHHHHHHHHHTCCEEEEEC-TTSCEEEEEEHHHHHHHHHTC
T ss_pred ---------Hh-cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEc-CCCCEEEEEEHHHHHHHHcCC
Confidence 66 4688999999999999999999999999999 579999999999999999873
No 17
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.80 E-value=1e-19 Score=147.36 Aligned_cols=120 Identities=13% Similarity=0.369 Sum_probs=102.6
Q ss_pred ccccccCCC--ceEecCCCCHHHHHHHHHhCCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 017163 235 RIGEANGRP--FAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 311 (376)
Q Consensus 235 ~v~~~m~~~--~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~-g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 311 (376)
+++++|.+. ++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|+++....+. .+.++.+
T Consensus 4 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~------~~~~v~~---- 73 (127)
T 3nqr_A 4 RVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDA------EAFSMDK---- 73 (127)
T ss_dssp BHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTC------CCCCHHH----
T ss_pred CHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccC------CCCCHHH----
Confidence 456678744 8999999999999999999999999999987 89999999999987553221 1356777
Q ss_pred CCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 312 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 312 ~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+|. ++.++.+++++.+|++.|.+++++++||+| ++|+++|+||.+|+++++++
T Consensus 74 ---------~m~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 74 ---------VLR-TAVVVPESKRVDRMLKEFRSQRYHMAIVID-EFGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp ---------HCB-CCCEEETTCBHHHHHHHHHHTTCCEEEEEC-TTSCEEEEEEHHHHHHHC--
T ss_pred ---------HcC-CCeEECCCCcHHHHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHHhC
Confidence 563 477999999999999999999999999999 57999999999999999876
No 18
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.80 E-value=2.3e-19 Score=143.84 Aligned_cols=119 Identities=19% Similarity=0.372 Sum_probs=105.7
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCC
Q 017163 235 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 314 (376)
Q Consensus 235 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~ 314 (376)
+++++|.+++.++.+++++.+|++.|.+++.+++||+|++|+++|+++.+|+......+ ..++.+
T Consensus 2 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~--------~~~v~~------- 66 (122)
T 3kpb_A 2 LVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQN--------KKTIEE------- 66 (122)
T ss_dssp BHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTT--------CCBGGG-------
T ss_pred chHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhc--------ccCHHH-------
Confidence 45677999999999999999999999999999999999999999999999999866532 124555
Q ss_pred CCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 315 ANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 315 ~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+|.+++.++.+++++.+|++.|.+++.+++||+| ++|+++|+||..|+++++.+
T Consensus 67 ------~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd-~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 67 ------IMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVD-DYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp ------TSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTCBEEEEEEHHHHHHHHC-
T ss_pred ------HhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEEC-CCCCEEEEEeHHHHHHHhhc
Confidence 6777899999999999999999999999999999 57999999999999999865
No 19
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.80 E-value=2.7e-19 Score=145.60 Aligned_cols=122 Identities=11% Similarity=0.190 Sum_probs=104.3
Q ss_pred ccccccC--CCceEecCCCCHHHHHHHHHhCCCCEEEEECC-CCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 017163 235 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDD-NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 311 (376)
Q Consensus 235 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~-~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 311 (376)
+++++|. ++++++.+++++.+|+++|.+++++++||+|+ +|+++|++|.+|+++....+.. +...++.+
T Consensus 3 ~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~----~~~~~v~~---- 74 (130)
T 3hf7_A 3 SVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKE----FTKEIMLR---- 74 (130)
T ss_dssp BHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSC----CCHHHHHH----
T ss_pred CHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCc----cchhhHHH----
Confidence 3566685 46899999999999999999999999999975 6899999999999987654321 11245666
Q ss_pred CCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 312 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 312 ~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+| +++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..|+++++++
T Consensus 75 ---------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 75 ---------AA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVD-EYGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp ---------HS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEEC-TTSCEEEEEEHHHHHHHHHC
T ss_pred ---------hc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEc-CCCCEEEEeeHHHHHHHHhC
Confidence 56 5688999999999999999999999999999 57999999999999999986
No 20
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.79 E-value=8e-19 Score=149.87 Aligned_cols=119 Identities=18% Similarity=0.329 Sum_probs=106.4
Q ss_pred ccccccC--CCceEecCCCCHHHHHHHHHhCCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 017163 235 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 311 (376)
Q Consensus 235 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~-g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 311 (376)
+++++|. .+++++++++++.+|+++|.+++++++||+|++ |+++|++|.+|++.....+. +.++.+
T Consensus 43 ~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~---- 111 (172)
T 3lhh_A 43 TISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGE-------RLELVD---- 111 (172)
T ss_dssp CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTC-------CCCGGG----
T ss_pred CHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcC-------cccHHH----
Confidence 5677788 678999999999999999999999999999987 99999999999998765331 245555
Q ss_pred CCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 312 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 312 ~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+| +++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..|+++++++
T Consensus 112 ---------im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 112 ---------LV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVD-EYGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp ---------GC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHHT
T ss_pred ---------Hh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEe-CCCCEEEEeeHHHHHHHHhC
Confidence 78 7899999999999999999999999999999 57999999999999999976
No 21
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.79 E-value=3.5e-19 Score=144.60 Aligned_cols=118 Identities=14% Similarity=0.325 Sum_probs=101.8
Q ss_pred ccccccC--CCceEecCCCCHHHHHHHHHhCCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 017163 235 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 311 (376)
Q Consensus 235 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~-g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 311 (376)
+++++|. .+++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|++.....+ +.++.+
T Consensus 6 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~--------~~~v~~---- 73 (129)
T 3jtf_A 6 TVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEP--------ALDIRS---- 73 (129)
T ss_dssp BHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCT--------TSCGGG----
T ss_pred CHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccC--------CcCHHH----
Confidence 4667787 678999999999999999999999999999985 9999999999998754311 234554
Q ss_pred CCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 312 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 312 ~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+|. ++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..|+++++++
T Consensus 74 ---------~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd-~~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 74 ---------LVR-PAVFIPEVKRLNVLLREFRASRNHLAIVID-EHGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp ---------GCB-CCCEEETTCBHHHHHHHHHTSSCCEEEEEC-C-CCEEEEEEHHHHHHHHHH
T ss_pred ---------HhC-CCeEeCCCCcHHHHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHHhC
Confidence 563 578999999999999999999999999999 57999999999999999986
No 22
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.79 E-value=5.8e-19 Score=145.42 Aligned_cols=123 Identities=17% Similarity=0.212 Sum_probs=105.5
Q ss_pred cccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCC--cEEEEEeHHHHHHHHhcccccccccccccHHHHH
Q 017163 232 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDND--SLLDIYSRSDITALAKDKAYAQIHLDEMNIHQAL 309 (376)
Q Consensus 232 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g--~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l 309 (376)
+..+++++|.+++.++.+++++.+|++.|.+++++++||+|++| +++|++|.+|++.....+... +.++.+
T Consensus 3 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~~~-----~~~v~~-- 75 (141)
T 2rih_A 3 MAIRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLDL-----DGPAMP-- 75 (141)
T ss_dssp --CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTCCT-----TSBSGG--
T ss_pred cceEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCCCC-----CCCHHH--
Confidence 34567888999999999999999999999999999999999888 999999999999866433111 244554
Q ss_pred hcCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHh
Q 017163 310 QLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 374 (376)
Q Consensus 310 ~~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~ 374 (376)
+|.+++.++.++ ++.+|++.|.+++++++||+| ++|+++|+||.+||++++.
T Consensus 76 -----------~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd-~~g~~~Giit~~dll~~~~ 127 (141)
T 2rih_A 76 -----------IANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVN-KNGELVGVLSIRDLCFERA 127 (141)
T ss_dssp -----------GCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHSCHH
T ss_pred -----------HcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEc-CCCcEEEEEEHHHHHHHHH
Confidence 777889999999 999999999999999999999 4799999999999987653
No 23
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.78 E-value=1.4e-18 Score=139.68 Aligned_cols=120 Identities=18% Similarity=0.232 Sum_probs=105.3
Q ss_pred cccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCC
Q 017163 236 IGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDA 315 (376)
Q Consensus 236 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~ 315 (376)
++++|.+++.++.+++++.+|++.|.+++.+++||+| +|+++|++|.+|+.+....+.. ..+.++.+
T Consensus 3 v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~~~----~~~~~v~~-------- 69 (125)
T 1pbj_A 3 VEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGDD----LAEVKVWE-------- 69 (125)
T ss_dssp HHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHTCC----TTTSBHHH--------
T ss_pred HHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcCCc----ccccCHHH--------
Confidence 5667888999999999999999999999999999999 8999999999999986654321 12457777
Q ss_pred CCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 316 NPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 316 ~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+|.+++.++.+++++.+|++.|.+++++++||+| + |+++|+||.+|+++++.+
T Consensus 70 -----~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd-~-~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 70 -----VMERDLVTISPRATIKEAAEKMVKNVVWRLLVEE-D-DEIIGVISATDILRAKMA 122 (125)
T ss_dssp -----HCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHC-
T ss_pred -----HcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEE-C-CEEEEEEEHHHHHHHHHh
Confidence 6777899999999999999999999999999999 5 999999999999999864
No 24
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.78 E-value=2.3e-18 Score=141.00 Aligned_cols=122 Identities=19% Similarity=0.355 Sum_probs=106.3
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHH-HHHHhcccccccccccccHHHHHhcCC
Q 017163 235 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDI-TALAKDKAYAQIHLDEMNIHQALQLGQ 313 (376)
Q Consensus 235 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di-~~~~~~~~~~~~~~~~~~v~~~l~~~~ 313 (376)
+++++|.+++.++.+++++.+|++.|.+++.+++||+|++|+++|++|.+|+ ......+.. .+.++.+
T Consensus 9 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~-----~~~~v~~------ 77 (138)
T 2p9m_A 9 KVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKYT-----LETTIGD------ 77 (138)
T ss_dssp BGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTCCC-----SSCBHHH------
T ss_pred CHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhccc-----CCcCHHH------
Confidence 5667788899999999999999999999999999999989999999999999 876543221 1356777
Q ss_pred CCCCCcccCCCcceEecCCCCHHHHHHHHhcCC-----CcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 314 DANPSLGFNGQRCQMCLRSDPLHKVMERLANPG-----VRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 314 ~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~-----~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+|.+++.++.+++++.+|++.|.+++ ++++||+| ++|+++|+||..|+++++.+
T Consensus 78 -------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd-~~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 78 -------VMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVD-KNNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp -------HSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEEC-TTSBEEEEEEHHHHHHHHHH
T ss_pred -------HhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEEC-CCCeEEEEEEHHHHHHHHHh
Confidence 67778999999999999999999999 99999999 47999999999999998864
No 25
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.78 E-value=2.2e-19 Score=147.23 Aligned_cols=121 Identities=13% Similarity=0.275 Sum_probs=102.1
Q ss_pred ccccccC--CCceEecCCCCHHHHHHHHHhCCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 017163 235 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 311 (376)
Q Consensus 235 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~-g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 311 (376)
+++++|. ++++++.+++++.+|+++|.+++++++||+|++ |+++|++|.+|++.....+... +.++.+
T Consensus 4 ~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~-----~~~v~~---- 74 (136)
T 3lfr_A 4 QVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGD-----SDDVKK---- 74 (136)
T ss_dssp BHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGG-----GCCGGG----
T ss_pred ChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCC-----CcCHHH----
Confidence 4566787 578999999999999999999999999999987 8999999999998865421111 245555
Q ss_pred CCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 312 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 312 ~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+|. ++.++.+++++.+|++.|.+++++++||+| ++|+++|+||.+|+++++++
T Consensus 75 ---------~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~g~lvGiit~~Dil~~l~~ 127 (136)
T 3lfr_A 75 ---------LLR-PATFVPESKRLNVLLREFRANHNHMAIVID-EYGGVAGLVTIEDVLEQIVG 127 (136)
T ss_dssp ---------TCB-CCCEEETTCBHHHHHHHHHHHTCCEEEEEC-TTSCEEEEEEHHHHHTTC--
T ss_pred ---------HcC-CCeEECCCCcHHHHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHHhC
Confidence 674 488999999999999999999999999999 57999999999999998875
No 26
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.78 E-value=1.3e-18 Score=145.38 Aligned_cols=123 Identities=34% Similarity=0.581 Sum_probs=100.9
Q ss_pred CCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCCccc
Q 017163 242 RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGF 321 (376)
Q Consensus 242 ~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~i 321 (376)
+++.++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++.....+.+... +.++.+++.... .
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~~~---~~~v~~~m~~~~-------~ 98 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNL---DVSVTKALQHRS-------H 98 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSCCCT---TSBGGGGGGTCC-------H
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchhhhhh---cchHHHHHhhhh-------c
Confidence 478899999999999999999999999999989999999999999987654432111 345555221100 1
Q ss_pred CCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 322 NGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 322 m~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
|..++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..||++++..
T Consensus 99 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~vGiit~~dil~~l~~ 151 (152)
T 2uv4_A 99 YFEGVLKCYLHETLETIINRLVEAEVHRLVVVD-ENDVVKGIVSLSDILQALVL 151 (152)
T ss_dssp HHHTCSEECTTSBHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHHC-
T ss_pred ccCCCeEECCCCcHHHHHHHHHHcCCeEEEEEC-CCCeEEEEEEHHHHHHHHHh
Confidence 226788999999999999999999999999999 47999999999999999864
No 27
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.78 E-value=7.3e-19 Score=147.04 Aligned_cols=119 Identities=18% Similarity=0.289 Sum_probs=104.7
Q ss_pred ccccccCC--CceEecCCCCHHHHHHHHHhCCCCEEEEE-CC-CCcEEEEEeHHHHHHHHhcccccccccccccHHHHHh
Q 017163 235 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIV-DD-NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQ 310 (376)
Q Consensus 235 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~i~~lpVv-d~-~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~ 310 (376)
+++++|.+ +++++.+++++.+|++.|.+++++++||+ |+ +|+++|++|.+|++.....+. +.++.+
T Consensus 21 ~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~--- 90 (153)
T 3oco_A 21 VASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD-------KAKIST--- 90 (153)
T ss_dssp BHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT-------TSBGGG---
T ss_pred EeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC-------CCcHHH---
Confidence 46667875 78999999999999999999999999999 75 489999999999998654331 245555
Q ss_pred cCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 311 LGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 311 ~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+| +++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..|+++++++
T Consensus 91 ----------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 91 ----------IM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVID-EYGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp ----------TC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEEC-TTSCEEEEECHHHHHHHHHC
T ss_pred ----------Hh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEe-CCCCEEEEeeHHHHHHHHhc
Confidence 77 7899999999999999999999999999999 57999999999999999976
No 28
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.78 E-value=2.7e-18 Score=144.77 Aligned_cols=126 Identities=21% Similarity=0.228 Sum_probs=106.1
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccc----cccccccHHHHHh
Q 017163 235 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQ----IHLDEMNIHQALQ 310 (376)
Q Consensus 235 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~----~~~~~~~v~~~l~ 310 (376)
+++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|++.......... ....+.++.+
T Consensus 6 ~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~~--- 82 (160)
T 2o16_A 6 KVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFE--- 82 (160)
T ss_dssp BGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHHH---
T ss_pred cHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHHH---
Confidence 567778888999999999999999999999999999998999999999999988654321100 0011345565
Q ss_pred cCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 311 LGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 311 ~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+|.+++.++.+++++.+|++.|.+++++++||+| + |+++|+||..||++++..
T Consensus 83 ----------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-g~lvGiit~~dil~~~~~ 135 (160)
T 2o16_A 83 ----------VMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVA-K-DVLVGIITDSDFVTIAIN 135 (160)
T ss_dssp ----------HSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEE-T-TEEEEEECHHHHHHHHHH
T ss_pred ----------HhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEE-C-CEEEEEEEHHHHHHHHHH
Confidence 7778899999999999999999999999999999 4 999999999999998753
No 29
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.78 E-value=5.2e-19 Score=143.27 Aligned_cols=121 Identities=13% Similarity=0.166 Sum_probs=104.9
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCC
Q 017163 235 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 314 (376)
Q Consensus 235 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~ 314 (376)
+++++|.+++.++.+++++.+|++.|.+++++++||+|+ |+++|++|.+|+.+...++... +.++.+
T Consensus 6 ~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~~~~~-----~~~v~~------- 72 (128)
T 3gby_A 6 TFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGWPTV-----KEKLGE------- 72 (128)
T ss_dssp BGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSSSCCT-----TCBCCG-------
T ss_pred EHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhhCCcc-----cCcHHH-------
Confidence 567779999999999999999999999999999999998 9999999999998754322110 123443
Q ss_pred CCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 315 ANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 315 ~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+|.+++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..|+++++..
T Consensus 73 ------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd-~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 73 ------ELLETVRSYRPGEQLFDNLISVAAAKCSVVPLAD-EDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp ------GGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEEC-TTCBEEEEEEHHHHHHHHHT
T ss_pred ------HccCCCcEECCCCCHHHHHHHHHhCCCcEEEEEC-CCCCEEEEEEHHHHHHHHHh
Confidence 7778899999999999999999999999999999 47999999999999999864
No 30
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.77 E-value=2.7e-18 Score=140.74 Aligned_cols=121 Identities=18% Similarity=0.355 Sum_probs=104.9
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHH-HHhcccccccccccccHHHHHhcCC
Q 017163 235 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA-LAKDKAYAQIHLDEMNIHQALQLGQ 313 (376)
Q Consensus 235 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~-~~~~~~~~~~~~~~~~v~~~l~~~~ 313 (376)
+++++|.+++.++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++ +...+.. .+.++.+
T Consensus 8 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~-----~~~~v~~------ 76 (138)
T 2yzi_A 8 PIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGLP-----YDIPVER------ 76 (138)
T ss_dssp BGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCCC-----TTSBGGG------
T ss_pred hHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCCc-----ccCCHHH------
Confidence 567779889999999999999999999999999999998999999999999974 3332211 1345555
Q ss_pred CCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 314 DANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 314 ~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+|.+++.++.+++++.+|++.|.+++++++ |+| ++|+++|+||..||++++..
T Consensus 77 -------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd-~~g~~~Giit~~dil~~~~~ 129 (138)
T 2yzi_A 77 -------IMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIE-EEGKIVGIFTLSDLLEASRR 129 (138)
T ss_dssp -------TCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEE-ETTEEEEEEEHHHHHHHHHC
T ss_pred -------HhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EEC-CCCCEEEEEEHHHHHHHHHH
Confidence 777889999999999999999999999999 999 46999999999999999864
No 31
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.77 E-value=1.2e-18 Score=144.82 Aligned_cols=127 Identities=22% Similarity=0.350 Sum_probs=104.0
Q ss_pred ccccccCC--CceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccc---------cccccc
Q 017163 235 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQ---------IHLDEM 303 (376)
Q Consensus 235 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~---------~~~~~~ 303 (376)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++.......... ....+.
T Consensus 6 ~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (152)
T 4gqw_A 6 TVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKTNGK 85 (152)
T ss_dssp BGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC-----CC
T ss_pred EhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHhccc
Confidence 56777877 7999999999999999999999999999999999999999999986432111000 000123
Q ss_pred cHHHHHhcCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 304 NIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 304 ~v~~~l~~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
++.+ +|..++.++.+++++.+|++.|.+++++++||+| ++|+++|+||.+||++++..
T Consensus 86 ~v~~-------------~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd-~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 86 LVGD-------------LMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVD-SDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp BHHH-------------HSEESCCCEESSSBHHHHHHHHHHSSCCEEEEEC-TTSBEEEEEEHHHHHHHHHC
T ss_pred cHHH-------------hcCCCceEECCCCcHHHHHHHHHHCCCCEEEEEC-CCCcEEEEEEHHHHHHHHHh
Confidence 4444 7777888999999999999999999999999999 47999999999999999865
No 32
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.77 E-value=2.3e-18 Score=140.19 Aligned_cols=121 Identities=17% Similarity=0.264 Sum_probs=105.6
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCC
Q 017163 235 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 314 (376)
Q Consensus 235 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~ 314 (376)
+++++|.+++.++.+++++.+|++.|.+++.+++||+| +|+++|++|.+|+......+... +.++.+
T Consensus 5 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~-----~~~v~~------- 71 (133)
T 2ef7_A 5 IVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKSL-----ETKAEE------- 71 (133)
T ss_dssp BGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCCT-----TCBGGG-------
T ss_pred cHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcCCCc-----ccCHHH-------
Confidence 56777988899999999999999999999999999999 89999999999998866543211 245555
Q ss_pred CCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 315 ANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 315 ~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+|.+++.++.+++++.+|++.|.+++.+++||+| ++|+++|+||..|+++++..
T Consensus 72 ------~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd-~~g~~~Giit~~dll~~~~~ 125 (133)
T 2ef7_A 72 ------FMTASLITIREDSPITGALALMRQFNIRHLPVVD-DKGNLKGIISIRDITRAIDD 125 (133)
T ss_dssp ------TSEECCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHHH
T ss_pred ------HcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEC-CCCeEEEEEEHHHHHHHHHH
Confidence 7777899999999999999999999999999999 47999999999999998753
No 33
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.77 E-value=2.9e-18 Score=141.29 Aligned_cols=126 Identities=25% Similarity=0.484 Sum_probs=101.4
Q ss_pred ccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCC
Q 017163 239 ANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPS 318 (376)
Q Consensus 239 ~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~ 318 (376)
+|.+++.++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+......+.+.. .+.++.+++..... .
T Consensus 16 ~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~---~~~~v~~~m~~~~~---~ 89 (144)
T 2nyc_A 16 ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYND---LSLSVGEALMRRSD---D 89 (144)
T ss_dssp CBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC-------CCSBHHHHHHHCC-----
T ss_pred CCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhccccccc---CCccHHHHHhcCcc---c
Confidence 36678999999999999999999999999999998999999999999998765432211 14677774422100 0
Q ss_pred cccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 319 LGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 319 ~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
..++.++.+++++.+|++.|.+++++++||+| ++|+++|+||.+||++++..
T Consensus 90 ----~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd-~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 90 ----FEGVYTCTKNDKLSTIMDNIRKARVHRFFVVD-DVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp --------CEECTTSBHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHHHH
T ss_pred ----cCCCeEECCCCcHHHHHHHHHHCCCCEEEEEC-CCCCEEEEEEHHHHHHHHHh
Confidence 01578999999999999999999999999999 47999999999999999864
No 34
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.77 E-value=2.4e-18 Score=144.81 Aligned_cols=122 Identities=17% Similarity=0.358 Sum_probs=104.4
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCC
Q 017163 235 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 314 (376)
Q Consensus 235 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~ 314 (376)
+++++|.++ +++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++.....+.. ..+.++.+
T Consensus 18 ~v~~im~~~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~----~~~~~v~~------- 85 (159)
T 3fv6_A 18 QVKDFQSIP-VVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQE----LTSVPVHI------- 85 (159)
T ss_dssp BGGGSCBCC-CEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSCSC----TTTCBGGG-------
T ss_pred CHHHHcCCC-EEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhccCc----ccCcCHHH-------
Confidence 466778874 599999999999999999999999999999999999999999986533211 11345665
Q ss_pred CCCCcccCCC--cceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCC---eEEEEEeHHHHHHHHhc
Q 017163 315 ANPSLGFNGQ--RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSK---RVEGIISLSDVFRFLLG 375 (376)
Q Consensus 315 ~~~~~~im~~--~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~---~~~GvIs~~Dil~~l~~ 375 (376)
+|.. ++.++.+++++.+|++.|.+++++++||+|+ +| +++|+||..||++++..
T Consensus 86 ------~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 86 ------IMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKD-TDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp ------TSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEE-CSSSEEEEEEEEHHHHHHHHHH
T ss_pred ------HHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeC-CCcceeEEEEEEHHHHHHHHHH
Confidence 6766 7899999999999999999999999999994 67 99999999999999863
No 35
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.77 E-value=1.8e-18 Score=143.92 Aligned_cols=118 Identities=12% Similarity=0.250 Sum_probs=104.8
Q ss_pred ccccccCC--CceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcC
Q 017163 235 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLG 312 (376)
Q Consensus 235 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~ 312 (376)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+.+....+.. +.+.++.+
T Consensus 29 ~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~----~~~~~v~~----- 99 (149)
T 3k2v_A 29 RVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGVD----MRDASIAD----- 99 (149)
T ss_dssp BGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSSC----CTTCBHHH-----
T ss_pred CHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCCC----cccCcHHH-----
Confidence 57788988 89999999999999999999999999999999999999999999987654321 12467777
Q ss_pred CCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHH
Q 017163 313 QDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFR 371 (376)
Q Consensus 313 ~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~ 371 (376)
+|..++.++.+++++.+|++.|.+++++++||+|+ ++++|+||..||++
T Consensus 100 --------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--~~~~Giit~~dil~ 148 (149)
T 3k2v_A 100 --------VMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADG--DHLLGVVHMHDLLR 148 (149)
T ss_dssp --------HSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHTC
T ss_pred --------HcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecC--CEEEEEEEHHHhhc
Confidence 67778899999999999999999999999999995 49999999999975
No 36
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.77 E-value=1.6e-18 Score=146.90 Aligned_cols=123 Identities=20% Similarity=0.366 Sum_probs=106.5
Q ss_pred ccccccCC---CceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 017163 235 RIGEANGR---PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 311 (376)
Q Consensus 235 ~v~~~m~~---~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 311 (376)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+.+.+..+..... +.++.+
T Consensus 25 ~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~---~~~v~~---- 97 (165)
T 3fhm_A 25 FVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASL---QQSVSV---- 97 (165)
T ss_dssp BHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGGGGG---TSBGGG----
T ss_pred CHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCCccc---cCCHHH----
Confidence 56677874 79999999999999999999999999999999999999999999986654321111 345665
Q ss_pred CCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 312 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 312 ~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+|.+++.+|.+++++.+|++.|.+++++++||+| + |+++|+||..||++++..
T Consensus 98 ---------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 98 ---------AMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEE-N-GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp ---------TSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHTTC
T ss_pred ---------HhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHHH
Confidence 7778899999999999999999999999999999 5 999999999999999864
No 37
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.77 E-value=1.1e-18 Score=146.19 Aligned_cols=125 Identities=18% Similarity=0.259 Sum_probs=103.5
Q ss_pred ccccccC--CCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcC
Q 017163 235 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLG 312 (376)
Q Consensus 235 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~ 312 (376)
+++++|. ++++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|++.....+.+....+.+.++.+
T Consensus 16 ~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~----- 90 (156)
T 3ctu_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVH----- 90 (156)
T ss_dssp TGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGG-----
T ss_pred HHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHH-----
Confidence 4566677 678999999999999999999999999999999999999999999987654332211111344554
Q ss_pred CCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 313 QDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 313 ~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+|..++.++.+++++.+|++.|.+++ ++|||| ++|+++|+||.+|+++++..
T Consensus 91 --------~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd-~~g~~~Giit~~dil~~l~~ 142 (156)
T 3ctu_A 91 --------MTKTDVAVVSPDFTITEVLHKLVDES--FLPVVD-AEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp --------GCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEEC-TTSBEEEEEETTHHHHHHHH
T ss_pred --------hccCCceeeCCCCcHHHHHHHHHHcC--eEEEEc-CCCeEEEEEEHHHHHHHHHH
Confidence 77788999999999999999999987 799999 57999999999999999853
No 38
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.77 E-value=8.5e-19 Score=142.79 Aligned_cols=122 Identities=16% Similarity=0.257 Sum_probs=104.8
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHH-HHhcccccccccccccHHHHHhcCC
Q 017163 235 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA-LAKDKAYAQIHLDEMNIHQALQLGQ 313 (376)
Q Consensus 235 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~-~~~~~~~~~~~~~~~~v~~~l~~~~ 313 (376)
+++++|.+++.++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+.. ....+.. ..+.++.+
T Consensus 9 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~----~~~~~v~~------ 78 (133)
T 1y5h_A 9 TARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLD----PNTATAGE------ 78 (133)
T ss_dssp CHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTCC----TTTSBHHH------
T ss_pred CHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCCC----ccccCHHH------
Confidence 456678888999999999999999999999999999998999999999999984 4433211 11356777
Q ss_pred CCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 314 DANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 314 ~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+|.+++.++.+++++.+|++.|.+++.+++||+| + |+++|+||.+||++++.+
T Consensus 79 -------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd-~-g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 79 -------LARDSIYYVDANASIQEMLNVMEEHQVRRVPVIS-E-HRLVGIVTEADIARHLPE 131 (133)
T ss_dssp -------HHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHTCC-
T ss_pred -------HhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHHh
Confidence 6667889999999999999999999999999999 4 999999999999998764
No 39
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.76 E-value=3.6e-18 Score=142.10 Aligned_cols=125 Identities=21% Similarity=0.222 Sum_probs=103.8
Q ss_pred ccccccC--CCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccc-cccccccHHHHHhc
Q 017163 235 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQ-IHLDEMNIHQALQL 311 (376)
Q Consensus 235 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~-~~~~~~~v~~~l~~ 311 (376)
+++++|. .+++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++.......... -.....++.+
T Consensus 16 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~---- 91 (150)
T 3lqn_A 16 FVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEMKVEQ---- 91 (150)
T ss_dssp BHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBGGG----
T ss_pred ChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcCCHHH----
Confidence 4566687 45899999999999999999999999999999999999999999998764321110 0111234444
Q ss_pred CCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 312 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 312 ~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+|..++.++.+++++.+|++.|.++++ +|||| ++|+++|+||.+||++++..
T Consensus 92 ---------~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd-~~g~~~Giit~~dil~~l~~ 143 (150)
T 3lqn_A 92 ---------VMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVN-EDGYFEGILTRRAILKLLNK 143 (150)
T ss_dssp ---------TCBSSCCEEETTCBHHHHHHHHHHCSE--EEEEC-TTCBEEEEEEHHHHHHHHHH
T ss_pred ---------HhcCCCceeCCCCCHHHHHHHHHhCCE--EEEEC-CCCcEEEEEEHHHHHHHHHH
Confidence 777889999999999999999999987 99999 47999999999999999864
No 40
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.76 E-value=7e-18 Score=142.26 Aligned_cols=131 Identities=14% Similarity=0.234 Sum_probs=104.1
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECC--CCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcC
Q 017163 235 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDD--NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLG 312 (376)
Q Consensus 235 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~--~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~ 312 (376)
+++++|.++++++.+++++.+|++.|.+++++++||+|+ +|+++|++|.+|+......+..........++.+++...
T Consensus 14 ~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~~~m~~~ 93 (164)
T 2pfi_A 14 RVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQDILARG 93 (164)
T ss_dssp BHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCBHHHHHHTT
T ss_pred CHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccchhhhhhccc
Confidence 567779889999999999999999999999999999996 799999999999998665332211111234667644321
Q ss_pred CCCCCCcccCCCc-ceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 313 QDANPSLGFNGQR-CQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 313 ~~~~~~~~im~~~-~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
. ...+ +.++.+++++.+|++.|.+++++++||+| + |+++|+||.+||++++.+
T Consensus 94 ~--------~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~-g~l~Giit~~dil~~~~~ 147 (164)
T 2pfi_A 94 C--------PTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-R-GRAVGCVSWVEMKKAISN 147 (164)
T ss_dssp C--------CCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-T-TEEEEEEEHHHHHHHHHH
T ss_pred c--------cccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-C-CEEEEEEEHHHHHHHHHh
Confidence 0 0112 78999999999999999999999999999 3 999999999999998753
No 41
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.75 E-value=1.8e-18 Score=148.22 Aligned_cols=138 Identities=22% Similarity=0.348 Sum_probs=102.6
Q ss_pred ccccccCC--CceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhccccc--------c--ccccc
Q 017163 235 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYA--------Q--IHLDE 302 (376)
Q Consensus 235 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~--------~--~~~~~ 302 (376)
+++++|.+ +++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|++++....... . ..+..
T Consensus 5 ~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (180)
T 3sl7_A 5 TVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKT 84 (180)
T ss_dssp BHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CCCS
T ss_pred eHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchhhh
Confidence 45667877 799999999999999999999999999999999999999999998532110000 0 00000
Q ss_pred c-cHHHHHhcCCCCCCCc-ccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 303 M-NIHQALQLGQDANPSL-GFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 303 ~-~v~~~l~~~~~~~~~~-~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
. .....+.. ....+. .+|.+++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..||++++..
T Consensus 85 ~~~~~~~~~~--~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 85 FNELQKLISK--TYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVD-ADGKLIGILTRGNVVRAALQ 156 (180)
T ss_dssp HHHHHHHHHT--TTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEEC-TTCBEEEEEEHHHHHHHHHH
T ss_pred hHHHHHHHhc--cccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEEC-CCCeEEEEEEHHHHHHHHHH
Confidence 0 00000000 011122 17878889999999999999999999999999999 47999999999999999864
No 42
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.75 E-value=5.6e-18 Score=138.31 Aligned_cols=122 Identities=11% Similarity=0.247 Sum_probs=103.8
Q ss_pred ccccccC---CCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 017163 235 RIGEANG---RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 311 (376)
Q Consensus 235 ~v~~~m~---~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 311 (376)
+++++|. +++.++.+++++.+|++.|.+++++++||+| +|+++|++|.+|+++.+...... ..+.++.+
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~---~~~~~v~~---- 78 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLLDKP---VKDTQVKE---- 78 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGSSSC---GGGSBGGG----
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHcCCC---cccCCHHH----
Confidence 4566687 7899999999999999999999999999998 89999999999998633221111 11345555
Q ss_pred CCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 312 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 312 ~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+|.+++.++.+++++.+|++.|.+++++++||+| + |+++|+||.+|+++++.+
T Consensus 79 ---------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 79 ---------IMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-D-GKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp ---------TSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHC
T ss_pred ---------hccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-C-CEEEEEEEHHHHHHHHHh
Confidence 7778899999999999999999999999999999 4 999999999999999865
No 43
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.75 E-value=5.4e-18 Score=146.24 Aligned_cols=124 Identities=19% Similarity=0.273 Sum_probs=106.5
Q ss_pred cccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCC
Q 017163 234 PRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQ 313 (376)
Q Consensus 234 ~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~ 313 (376)
.+++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|++......... ....++.+
T Consensus 9 ~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~~---~~~~~v~~------ 79 (184)
T 1pvm_A 9 MRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKK---PDEVPIRL------ 79 (184)
T ss_dssp CBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCCC---GGGSBGGG------
T ss_pred cCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccC---cccCCHHH------
Confidence 467778999999999999999999999999999999999889999999999998865421111 11245555
Q ss_pred CCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHh
Q 017163 314 DANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 374 (376)
Q Consensus 314 ~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~ 374 (376)
+|.+++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..||++++.
T Consensus 80 -------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 80 -------VMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVD-DPGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp -------TSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEEC-TTCCEEEEEEHHHHTTTSC
T ss_pred -------HhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEc-CCCeEEEEEEHHHHHHHHH
Confidence 7777899999999999999999999999999999 4799999999999998764
No 44
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.75 E-value=8.6e-18 Score=140.94 Aligned_cols=125 Identities=14% Similarity=0.268 Sum_probs=105.8
Q ss_pred cccccccccC------CCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccH
Q 017163 232 WVPRIGEANG------RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNI 305 (376)
Q Consensus 232 ~~~~v~~~m~------~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v 305 (376)
+..+++++|. +++.++.+++++.+|++.|.+++++++||+| +|+++|++|.+|+++.+...... ..+.++
T Consensus 5 ~~~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~---~~~~~v 80 (157)
T 4fry_A 5 MSTTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQERS---SKATRV 80 (157)
T ss_dssp --CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGGGTCC---SSSCBH
T ss_pred HHHHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHhccCC---ccccCH
Confidence 3345677776 5679999999999999999999999999965 89999999999999866433221 114677
Q ss_pred HHHHhcCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 306 HQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 306 ~~~l~~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
.+ +|.+++.++.+++++.+|++.|.+++++++||+| + |+++|+||.+||++++..
T Consensus 81 ~~-------------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~l~~ 135 (157)
T 4fry_A 81 EE-------------IMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-G-GKLIGLISIGDLVKSVIA 135 (157)
T ss_dssp HH-------------HSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHT
T ss_pred HH-------------HcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHHH
Confidence 77 6777899999999999999999999999999999 4 999999999999999864
No 45
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.75 E-value=1.5e-17 Score=139.65 Aligned_cols=125 Identities=9% Similarity=0.136 Sum_probs=104.8
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCCE-EEEECCCCcEEEEEeHHHHHHHHhccc---cc--------cccccc
Q 017163 235 RIGEANGRPFAMLRPTASLGSALALLVQADVSS-IPIVDDNDSLLDIYSRSDITALAKDKA---YA--------QIHLDE 302 (376)
Q Consensus 235 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~-lpVvd~~g~lvGiis~~Di~~~~~~~~---~~--------~~~~~~ 302 (376)
+++++|.+++.++.+++++.+|++.|.++++++ +||+|++ +++|++|.+|++....... .. .....+
T Consensus 17 ~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (157)
T 1o50_A 17 DVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMKRLIA 95 (157)
T ss_dssp HHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHHHHHHCCCC-------CCCCCSS
T ss_pred cHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHHHHcC
Confidence 567789999999999999999999999999999 9999977 9999999999988643110 00 001113
Q ss_pred ccHHHHHhcCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 303 MNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 303 ~~v~~~l~~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
.++.+ +|.+ +.++.+++++.+|++.|.+++++++||+| ++|+++|+||..||++++.+
T Consensus 96 ~~v~~-------------im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~vGiit~~dll~~l~~ 153 (157)
T 1o50_A 96 KNASE-------------IMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVD-EKGEIVGDLNSLEILLALWK 153 (157)
T ss_dssp CBHHH-------------HCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHHH
T ss_pred CcHHH-------------HcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEc-CCCEEEEEEEHHHHHHHHHH
Confidence 45555 7777 99999999999999999999999999999 46999999999999999864
No 46
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.74 E-value=1.1e-17 Score=140.06 Aligned_cols=125 Identities=18% Similarity=0.196 Sum_probs=103.4
Q ss_pred ccccccCC--CceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccc-cccccccccHHHHHhc
Q 017163 235 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAY-AQIHLDEMNIHQALQL 311 (376)
Q Consensus 235 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~-~~~~~~~~~v~~~l~~ 311 (376)
+++++|.+ ++.++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+......+.. ....+.+.++.+
T Consensus 12 ~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~---- 87 (157)
T 2emq_A 12 TVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERLETMKVEE---- 87 (157)
T ss_dssp BSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSBCGGGGGTCBGGG----
T ss_pred cHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccccchHHhcCCcHHH----
Confidence 45666875 88899999999999999999999999999989999999999999986543211 000111234444
Q ss_pred CCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 312 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 312 ~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+|.+++.++.+++++.+|++.|.++++ +|||| ++|+++|+||.+||++++..
T Consensus 88 ---------~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd-~~g~~~Giit~~dil~~~~~ 139 (157)
T 2emq_A 88 ---------VMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEN-DDGYFAGIFTRREVLKQLNK 139 (157)
T ss_dssp ---------TCBCCCCEEETTSBHHHHHHHHHHSSE--EEEEC-SSSSEEEEEEHHHHHHHHHH
T ss_pred ---------HhCCCCceecCCCcHHHHHHHHhhCCE--EEEEc-CCCeEEEEEEHHHHHHHHHH
Confidence 777889999999999999999999987 99999 47999999999999998854
No 47
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.74 E-value=1e-17 Score=140.84 Aligned_cols=125 Identities=18% Similarity=0.212 Sum_probs=104.8
Q ss_pred ccccccCC--CceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhccc-ccccccccccHHHHHhc
Q 017163 235 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKA-YAQIHLDEMNIHQALQL 311 (376)
Q Consensus 235 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~-~~~~~~~~~~v~~~l~~ 311 (376)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++....... +........++.+
T Consensus 15 ~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~~---- 90 (159)
T 1yav_A 15 TVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEE---- 90 (159)
T ss_dssp BHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHHH----
T ss_pred hHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCHHH----
Confidence 45666877 8999999999999999999999999999999999999999999998765321 1111112456666
Q ss_pred CCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 312 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 312 ~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+|.+++.++.+++++.+|++.|.++++ +||+| ++|+++|+||.+||++++..
T Consensus 91 ---------~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd-~~g~~vGiit~~dil~~~~~ 142 (159)
T 1yav_A 91 ---------VMLTDIPRLHINDPIMKGFGMVINNGF--VCVEN-DEQVFEGIFTRRVVLKELNK 142 (159)
T ss_dssp ---------HSBCSCCEEETTSBHHHHHHHTTTCSE--EEEEC-TTCBEEEEEEHHHHHHHHHH
T ss_pred ---------hcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEe-CCCeEEEEEEHHHHHHHHHH
Confidence 677789999999999999999999987 99999 47999999999999998753
No 48
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.73 E-value=2e-17 Score=141.30 Aligned_cols=118 Identities=15% Similarity=0.189 Sum_probs=101.1
Q ss_pred ccccccC--CCceEecCCCCHHHHHHHHHhCCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 017163 235 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 311 (376)
Q Consensus 235 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~-g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 311 (376)
+++++|. ++++++.+++++.+|+++|.+++++++||+|++ |+++|+++.+|++.....+. +.++.
T Consensus 37 ~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~-------~~~v~----- 104 (173)
T 3ocm_A 37 SIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEG-------RVRRN----- 104 (173)
T ss_dssp CSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-------SCCGG-----
T ss_pred CHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCC-------cchhH-----
Confidence 4566685 468899999999999999999999999999986 89999999999998654321 12222
Q ss_pred CCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 312 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 312 ~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
|.+++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..||++++++
T Consensus 105 ----------~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvd-e~g~lvGiIT~~Dil~~l~~ 157 (173)
T 3ocm_A 105 ----------RLRDPIIVHESIGILRLMDTLKRSRGQLVLVAD-EFGAIEGLVTPIDVFEAIAG 157 (173)
T ss_dssp ----------GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEEC-TTCCEEEEECHHHHHHHHHC
T ss_pred ----------hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEe-CCCCEEEEEeHHHHHHHHhC
Confidence 235688999999999999999999999999999 57999999999999999976
No 49
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.73 E-value=4.6e-17 Score=146.89 Aligned_cols=199 Identities=12% Similarity=0.089 Sum_probs=129.6
Q ss_pred CCCCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCC-----CCccc--
Q 017163 147 GRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSS-----SSLPI-- 219 (376)
Q Consensus 147 ~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~-----~~~~~-- 219 (376)
+++|.++++++.+++++.+|+++|.+++++++||+|+ +| +++|++|..|+++++........ .....
T Consensus 10 ~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~---~~---~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v~ 83 (245)
T 3l2b_A 10 EDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADG---NN---HLLGMLSTSNITATYMDIWDSNILAKSATSLDNIL 83 (245)
T ss_dssp GGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECT---TC---BEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHHH
T ss_pred HHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---EEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHHH
Confidence 4578889999999999999999999999999999975 57 89999999999998754321100 00000
Q ss_pred -------------ccccccccccccc-ccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCC----------
Q 017163 220 -------------LQQPVSSIQLGTW-VPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDND---------- 275 (376)
Q Consensus 220 -------------~~~~i~~l~i~~~-~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g---------- 275 (376)
.....+.+.++.. ...+.+.+....+.+-.+ -.++.+.+.+.+++++++++...
T Consensus 84 ~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgd--r~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~ 161 (245)
T 3l2b_A 84 DTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGD--RAEIQAELIELKVSLLIVTGGHTPSKEIIELAK 161 (245)
T ss_dssp HHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECS--CHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHH
T ss_pred HHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECC--CHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHH
Confidence 0000011111111 112233344443344443 47899999999999998885321
Q ss_pred --cEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCCcccCC-CcceEecCCCCHHHHHHHHhcCCCcEEEE
Q 017163 276 --SLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGFNG-QRCQMCLRSDPLHKVMERLANPGVRRLVI 352 (376)
Q Consensus 276 --~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~im~-~~~~~~~~~~tl~~a~~~m~~~~~~~l~V 352 (376)
.+-.+.+..|........ ....++++ +|. +++.++.+++++.+|++.|.+++++++||
T Consensus 162 ~~~~~~i~t~~d~~~~~~~~------~~~~~v~~-------------im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pV 222 (245)
T 3l2b_A 162 KNNITVITTPHDSFTASRLI------VQSLPVDY-------------VMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPV 222 (245)
T ss_dssp HHTCEEEECSSCHHHHHHHG------GGGSBHHH-------------HSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEE
T ss_pred HcCCeEEEeCCChHHHHHHH------hcCCceee-------------EecCCccEEECCCCcHHHHHHHHHhcCCceEEE
Confidence 122333333332211100 00234444 787 88999999999999999999999999999
Q ss_pred EeCCCCeEEEEEeHHHHHHHH
Q 017163 353 VEAGSKRVEGIISLSDVFRFL 373 (376)
Q Consensus 353 Vd~~~~~~~GvIs~~Dil~~l 373 (376)
|| ++|+++|+||.+|++++.
T Consensus 223 vd-~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 223 ID-ENNKVVGSIARFHLISTH 242 (245)
T ss_dssp EC-TTCBEEEEEECC------
T ss_pred Ec-CCCeEEEEEEHHHhhchh
Confidence 99 479999999999999864
No 50
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.73 E-value=8.6e-18 Score=143.09 Aligned_cols=135 Identities=20% Similarity=0.309 Sum_probs=103.9
Q ss_pred CCCCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCccccccc---
Q 017163 147 GRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQP--- 223 (376)
Q Consensus 147 ~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~--- 223 (376)
+++|.++++++.+++++.+|+++|.+++++++||+|+ +| +++|++|.+|+++.+........ ...+...
T Consensus 21 ~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~---~g---~lvGiit~~Dll~~~~~~~~~~~--~~~~~~~~~~ 92 (170)
T 4esy_A 21 RDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQ---NG---HLVGIITESDFLRGSIPFWIYEA--SEILSRAIPA 92 (170)
T ss_dssp GGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECT---TS---CEEEEEEGGGGGGGTCCTTHHHH--HHHHTTTSCH
T ss_pred HHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcC---Cc---cEEEEEEHHHHHHHHhhccccch--hhhhhhccch
Confidence 4589999999999999999999999999999999976 67 89999999999986532211000 0000000
Q ss_pred --cccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 017163 224 --VSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 290 (376)
Q Consensus 224 --i~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~ 290 (376)
...+.-......++++|+++++++++++++.+|+++|.+++++++||+| +|+++|+||++||++.+
T Consensus 93 ~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l 160 (170)
T 4esy_A 93 PEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLL 160 (170)
T ss_dssp HHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTS
T ss_pred hhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHH
Confidence 0000000012356788999999999999999999999999999999997 69999999999998854
No 51
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.72 E-value=4e-17 Score=143.35 Aligned_cols=117 Identities=15% Similarity=0.203 Sum_probs=104.2
Q ss_pred cccccccCCCceEecCCCCHHHHHHHHHhC---CCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHh
Q 017163 234 PRIGEANGRPFAMLRPTASLGSALALLVQA---DVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQ 310 (376)
Q Consensus 234 ~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~---~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~ 310 (376)
.+++++|+++++++.+++++.+|++.|.++ +++.+||+|++|+++|++|.+|++... .+.++.+
T Consensus 54 ~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~----------~~~~v~~--- 120 (205)
T 3kxr_A 54 NEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKHE----------PHEPLIS--- 120 (205)
T ss_dssp TCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTSC----------TTSBGGG---
T ss_pred chHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhCC----------CcchHHH---
Confidence 357788999999999999999999999987 899999999999999999999986421 1345555
Q ss_pred cCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHh
Q 017163 311 LGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 374 (376)
Q Consensus 311 ~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~ 374 (376)
+|.+++.++.+++++.+|++.|.+++++.+|||| ++|+++|+||..|+++.+.
T Consensus 121 ----------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD-~~g~lvGiIT~~Dil~~i~ 173 (205)
T 3kxr_A 121 ----------LLSEDSRALTANTTLLDAAEAIEHSREIELPVID-DAGELIGRVTLRAATALVR 173 (205)
T ss_dssp ----------GCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred ----------HhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEc-CCCeEEEEEEHHHHHHHHH
Confidence 8888899999999999999999999999999999 5799999999999999874
No 52
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.72 E-value=1.4e-17 Score=139.65 Aligned_cols=114 Identities=11% Similarity=0.288 Sum_probs=99.7
Q ss_pred ccccccCC--CceEecCCCCHHHHHHHHHhCCCCEEEEECCCC-cEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 017163 235 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDND-SLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 311 (376)
Q Consensus 235 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g-~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 311 (376)
+++++|.+ +++++++++++.+|++.|.+++++++||+|+++ +++|++|.+|++.....+ .+.++.+
T Consensus 39 ~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~-------~~~~v~~---- 107 (156)
T 3oi8_A 39 EVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP-------EQFHLKS---- 107 (156)
T ss_dssp BGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG-------GGCCHHH----
T ss_pred CHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC-------CcccHHH----
Confidence 56777875 789999999999999999999999999999874 999999999998754332 1356777
Q ss_pred CCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHH
Q 017163 312 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVF 370 (376)
Q Consensus 312 ~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil 370 (376)
+|. ++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..||+
T Consensus 108 ---------im~-~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd-~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 108 ---------ILR-PAVFVPEGKSLTALLKEFREQRNHMAIVID-EYGGTSGLVTFEDII 155 (156)
T ss_dssp ---------HCB-CCCEEETTSBHHHHHHHHHHTTCCEEEEEC-TTSSEEEEEEHHHHC
T ss_pred ---------HcC-CCEEECCCCCHHHHHHHHHhcCCeEEEEEC-CCCCEEEEEEHHHhc
Confidence 664 488999999999999999999999999999 579999999999986
No 53
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.72 E-value=2.4e-17 Score=145.65 Aligned_cols=120 Identities=14% Similarity=0.200 Sum_probs=105.1
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHh
Q 017163 231 TWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQ 310 (376)
Q Consensus 231 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~ 310 (376)
.|...++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|+..... +.++.+
T Consensus 10 ~~~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~~----------~~~v~~--- 76 (213)
T 1vr9_A 10 HHHMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLDL----------DSSVFN--- 76 (213)
T ss_dssp ---CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSCT----------TSBSGG---
T ss_pred ccccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhcC----------CCcHHH---
Confidence 4566778889999999999999999999999999999999998999999999999876321 234454
Q ss_pred cCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHh
Q 017163 311 LGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 374 (376)
Q Consensus 311 ~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~ 374 (376)
+|.+++.++.+++++.+|++.|.+++++++||+| ++|+++|+||.+|+++++.
T Consensus 77 ----------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~lvGiit~~Dil~~~~ 129 (213)
T 1vr9_A 77 ----------KVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVD-EEMRLKGAVSLHDFLEALI 129 (213)
T ss_dssp ----------GCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEEC-TTCBEEEEEEHHHHHHHHH
T ss_pred ----------HccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEc-CCCEEEEEEEHHHHHHHHH
Confidence 7878899999999999999999999999999999 4799999999999999875
No 54
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.71 E-value=4e-17 Score=140.43 Aligned_cols=125 Identities=14% Similarity=0.231 Sum_probs=102.7
Q ss_pred ccccccCCC----ceEe--cCCCCHHHHHHHHHhCCCCEEEEE--CCCCcEEEEEeHHHHHHHHhcccccccc-------
Q 017163 235 RIGEANGRP----FAML--RPTASLGSALALLVQADVSSIPIV--DDNDSLLDIYSRSDITALAKDKAYAQIH------- 299 (376)
Q Consensus 235 ~v~~~m~~~----~~~v--~~~~~l~~a~~~m~~~~i~~lpVv--d~~g~lvGiis~~Di~~~~~~~~~~~~~------- 299 (376)
+++++|.+. ++++ .+++++.+|+++|.+++++++||+ |++|+++|+||.+|++.....+......
T Consensus 12 ~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~ 91 (185)
T 2j9l_A 12 LAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSII 91 (185)
T ss_dssp BHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCTTCEE
T ss_pred cHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCcccccee
Confidence 566678766 7888 999999999999999999999999 7889999999999999865432110000
Q ss_pred -------------cccccHHHHHhcCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeH
Q 017163 300 -------------LDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISL 366 (376)
Q Consensus 300 -------------~~~~~v~~~l~~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~ 366 (376)
....++.+ +|.+++.++.+++++.+|++.|.+++++++||+|+ |+++|+||.
T Consensus 92 ~~~~~~~~~~~~~~~~~~v~~-------------im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~--g~~vGiit~ 156 (185)
T 2j9l_A 92 YFTEHSPPLPPYTPPTLKLRN-------------ILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHN--GRLLGIITK 156 (185)
T ss_dssp ECSSSCCCCCTTCCCCEECGG-------------GEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEH
T ss_pred ecccCCcccccccccCccHHH-------------hhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEEC--CEEEEEEEH
Confidence 00122222 78788999999999999999999999999999993 999999999
Q ss_pred HHHHHHHh
Q 017163 367 SDVFRFLL 374 (376)
Q Consensus 367 ~Dil~~l~ 374 (376)
+||++++.
T Consensus 157 ~dll~~l~ 164 (185)
T 2j9l_A 157 KDVLKHIA 164 (185)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999875
No 55
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.70 E-value=1.2e-16 Score=140.22 Aligned_cols=122 Identities=15% Similarity=0.119 Sum_probs=107.2
Q ss_pred cccCCCCCCCCCCceEeCCCCCHHHHHHHHHhC---CCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCc
Q 017163 141 RQMDGNGRPCPRPLVQAGPYDSLKEVALKILQN---KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSL 217 (376)
Q Consensus 141 ~~~~~~~~~~~~~~v~v~~~~sl~~a~~~m~~~---~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~ 217 (376)
|..+.+|.+|..+++++.+++++.+|++.|.++ +++.+||+|. ++ +++|++|.+|++...
T Consensus 51 ~~~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~---~~---~lvGivt~~dll~~~----------- 113 (205)
T 3kxr_A 51 YSENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDE---AD---KYLGTVRRYDIFKHE----------- 113 (205)
T ss_dssp SCTTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECT---TC---BEEEEEEHHHHTTSC-----------
T ss_pred CCcchHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcC---CC---eEEEEEEHHHHHhCC-----------
Confidence 778888999999999999999999999999987 8999999975 56 899999999987510
Q ss_pred cccccccccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcc
Q 017163 218 PILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 293 (376)
Q Consensus 218 ~~~~~~i~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~ 293 (376)
.. ..++++|.++++++++++++.+|++.|.+++++.+||||++|+++|+||..|++..+.+.
T Consensus 114 --~~------------~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e 175 (205)
T 3kxr_A 114 --PH------------EPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREH 175 (205)
T ss_dssp --TT------------SBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred --Cc------------chHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 11 235566888999999999999999999999999999999999999999999999977643
No 56
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.70 E-value=9.9e-17 Score=141.71 Aligned_cols=155 Identities=14% Similarity=0.149 Sum_probs=100.8
Q ss_pred CCCCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccc
Q 017163 147 GRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 226 (376)
Q Consensus 147 ~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~ 226 (376)
+..|..+++++.+++++.+|+++|.+++++.+||+|+ ++ +++|++|.+|+++.+. .
T Consensus 16 ~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~---~~---~l~Givt~~dl~~~~~-------------~----- 71 (213)
T 1vr9_A 16 KKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDR---EG---HFRGVVNKEDLLDLDL-------------D----- 71 (213)
T ss_dssp GGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECT---TS---BEEEEEEGGGGTTSCT-------------T-----
T ss_pred HHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcC---CC---EEEEEEEHHHHHhhcC-------------C-----
Confidence 3468889999999999999999999999999999975 46 8999999999976321 1
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHH
Q 017163 227 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIH 306 (376)
Q Consensus 227 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~ 306 (376)
..+.++|.++++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|+++...... ...
T Consensus 72 -------~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~---------~~~ 135 (213)
T 1vr9_A 72 -------SSVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEAL---------AMD 135 (213)
T ss_dssp -------SBSGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSC---------C--
T ss_pred -------CcHHHHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHh---------cCC
Confidence 1355668889999999999999999999999999999998899999999999998654221 111
Q ss_pred HHHhcCCCCCCCcccCCC-cceEecCCCCHHHHHHHHhcCCCcEEEEEe
Q 017163 307 QALQLGQDANPSLGFNGQ-RCQMCLRSDPLHKVMERLANPGVRRLVIVE 354 (376)
Q Consensus 307 ~~l~~~~~~~~~~~im~~-~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd 354 (376)
+ .+.+ .+.+.....++.+|.+.|.+++++.++|++
T Consensus 136 ~-------------~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~ 171 (213)
T 1vr9_A 136 V-------------PGIRFSVLLEDKPGELRKVVDALALSNINILSVIT 171 (213)
T ss_dssp -------------------------------------------------
T ss_pred C-------------CcEEEEEEeCCCCccHHHHHHHHHHCCCcEEEEEE
Confidence 1 0000 111223334599999999999999999886
No 57
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.70 E-value=7.2e-17 Score=135.50 Aligned_cols=118 Identities=18% Similarity=0.228 Sum_probs=98.1
Q ss_pred CCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccccccc
Q 017163 151 PRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLG 230 (376)
Q Consensus 151 ~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~i~ 230 (376)
..+++++.+++|+.+|+++|.+++++++||+|+ +| +++|++|.+|+++++....... .....
T Consensus 24 ~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~---~~---~lvGiit~~Di~~~~~~~~~~~---~~~~~--------- 85 (156)
T 3k6e_A 24 AKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD---EK---QFVGTIGLRDIMAYQMEHDLSQ---EIMAD--------- 85 (156)
T ss_dssp TTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC----C---BEEEEEEHHHHHHHHHHHTCCH---HHHTT---------
T ss_pred hhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcC---CC---cEEEEEEecchhhhhhhccccc---ccccc---------
Confidence 357999999999999999999999999999975 56 8999999999999876532110 00111
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 231 TWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 231 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
..++++|.+++.++++++++.+|+++|.++++ +||||++|+++|+||++|+++.+.
T Consensus 86 ---~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~--lpVVd~~g~l~GiiT~~Dil~~~~ 141 (156)
T 3k6e_A 86 ---TDIVHMTKTDVAVVSPDFTITEVLHKLVDESF--LPVVDAEGIFQGIITRKSILKAVN 141 (156)
T ss_dssp ---SBGGGTCBCSCCCBCTTCCHHHHHHHTTTSSE--EEEECTTSBEEEEEEHHHHHHHHH
T ss_pred ---cCHHHhhcCCceecccccHHHHHHHHHHHcCC--eEEEecCCEEEEEEEHHHHHHHHH
Confidence 24566699999999999999999999998765 999999999999999999998764
No 58
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.69 E-value=1.7e-16 Score=143.13 Aligned_cols=140 Identities=16% Similarity=0.286 Sum_probs=105.4
Q ss_pred cccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCC--CcEEEEEeHHHHHHHHhcccc--ccc-----------
Q 017163 234 PRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDN--DSLLDIYSRSDITALAKDKAY--AQI----------- 298 (376)
Q Consensus 234 ~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~--g~lvGiis~~Di~~~~~~~~~--~~~----------- 298 (376)
..++++|.++++++.+++++.+|.++|.+++++++||||++ |+++|+||++||+.++..... ...
T Consensus 13 ~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~~~~~ 92 (250)
T 2d4z_A 13 IQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEADEEG 92 (250)
T ss_dssp CBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCBCCC-
T ss_pred CChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcccccc
Confidence 46788899999999999999999999999999999999864 689999999999986543210 000
Q ss_pred -----------------cccc---------------------------------------------------------cc
Q 017163 299 -----------------HLDE---------------------------------------------------------MN 304 (376)
Q Consensus 299 -----------------~~~~---------------------------------------------------------~~ 304 (376)
.+.+ ++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 172 (250)
T 2d4z_A 93 RNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFEEMLT 172 (250)
T ss_dssp --------------------------------------------------------------------------CCSCCB
T ss_pred cccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccccccC
Confidence 0000 00
Q ss_pred HHHHHhcC-CCCCCCc---c-cCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 305 IHQALQLG-QDANPSL---G-FNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 305 v~~~l~~~-~~~~~~~---~-im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
..+..... .....++ + +|...++++.++++|.+|..+|...|++++||++. |+++||||+.|+++++.+
T Consensus 173 ~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~~--GrLVGIVTrkDl~kai~~ 246 (250)
T 2d4z_A 173 LEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTSM--GKLVGVVALAEIQAAIEG 246 (250)
T ss_dssp HHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHHHC
T ss_pred hhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEEC--CEEEEEEEHHHHHHHHHH
Confidence 00000000 0001122 1 57888999999999999999999999999999994 999999999999999864
No 59
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.69 E-value=1.4e-16 Score=129.27 Aligned_cols=119 Identities=12% Similarity=0.141 Sum_probs=99.2
Q ss_pred CCCCCC--CCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCccccccc
Q 017163 146 NGRPCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQP 223 (376)
Q Consensus 146 ~~~~~~--~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~ 223 (376)
++++|. .+++++.+++++.+|++.|.+++++++||+++ +.| +++|++|.+|+++.+..... ..
T Consensus 8 v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~~Givt~~dl~~~~~~~~~---------~~- 72 (130)
T 3i8n_A 8 VTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSE--QKD---NIIGFVHRLELFKMQQSGSG---------QK- 72 (130)
T ss_dssp CTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESS--STT---CEEEECCHHHHHHHHHTTTT---------TS-
T ss_pred HhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---cEEEEEEHHHHHHHHhcCCC---------cC-
Confidence 455777 45779999999999999999999999999965 226 89999999999987653210 12
Q ss_pred cccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 224 VSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 224 i~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
.++++| +++.++.+++++.+|++.|.+++++.+||+|++|+++|++|.+|+++.+.
T Consensus 73 -----------~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 73 -----------QLGAVM-RPIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp -----------BHHHHS-EECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred -----------CHHHHh-cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHc
Confidence 344457 35789999999999999999999999999999999999999999998653
No 60
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.69 E-value=1.7e-16 Score=131.64 Aligned_cols=117 Identities=14% Similarity=0.139 Sum_probs=101.0
Q ss_pred CCCCCC--CceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccc
Q 017163 147 GRPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPV 224 (376)
Q Consensus 147 ~~~~~~--~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i 224 (376)
+++|.+ +++++.+++++.+|++.|.+++++++||+|+ +.| +++|++|.+|+++++.... ..
T Consensus 26 ~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~~----------~~-- 88 (148)
T 3lv9_A 26 REIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRK--NKD---DILGFVHIRDLYNQKINEN----------KI-- 88 (148)
T ss_dssp GGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESS--STT---SEEEEEEHHHHHHHHHHHS----------CC--
T ss_pred HHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHhcCC----------Cc--
Confidence 457777 8999999999999999999999999999965 226 8999999999998765431 12
Q ss_pred ccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 225 SSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 225 ~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
.++++| +++.++.+++++.+|+++|.+++++.+||+|++|+++|++|.+|++..+.
T Consensus 89 ----------~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 144 (148)
T 3lv9_A 89 ----------ELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIV 144 (148)
T ss_dssp ----------CGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHH
T ss_pred ----------cHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 344558 78899999999999999999999999999999999999999999998654
No 61
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.68 E-value=3.5e-16 Score=133.34 Aligned_cols=120 Identities=10% Similarity=0.057 Sum_probs=102.8
Q ss_pred CCCCCCC--CCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccc
Q 017163 145 GNGRPCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQ 222 (376)
Q Consensus 145 ~~~~~~~--~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~ 222 (376)
.++++|. .+++++.+++++.+|+++|.+++++++||++. +.+ +++|++|.+|+++.+.... .
T Consensus 43 ~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~~----------~- 106 (172)
T 3lhh_A 43 TISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRN--NVD---DMVGIISAKQLLSESIAGE----------R- 106 (172)
T ss_dssp CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESS--STT---SEEEEEEHHHHHHHHHTTC----------C-
T ss_pred CHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---eEEEEEEHHHHHHHHhhcC----------c-
Confidence 3456887 77899999999999999999999999999965 126 8999999999998764320 1
Q ss_pred ccccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 017163 223 PVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 292 (376)
Q Consensus 223 ~i~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~ 292 (376)
..++++| +++.++.+++++.+|+++|.+++++.+||+|++|+++|+||..|++..+..
T Consensus 107 -----------~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 107 -----------LELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp -----------CCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred -----------ccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhC
Confidence 2345558 789999999999999999999999999999999999999999999987653
No 62
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.68 E-value=1.8e-16 Score=126.75 Aligned_cols=114 Identities=20% Similarity=0.331 Sum_probs=100.3
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccccc
Q 017163 149 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 228 (376)
Q Consensus 149 ~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 228 (376)
+|.++++++.+++++.+|++.|.+++.+.+||+|+ +| +++|+++..|+++++.... .
T Consensus 6 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~G~vt~~dl~~~~~~~~-----------~------ 62 (122)
T 3kpb_A 6 ILSKPPITAHSNISIMEAAKILIKHNINHLPIVDE---HG---KLVGIITSWDIAKALAQNK-----------K------ 62 (122)
T ss_dssp HCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECT---TS---BEEEEECHHHHHHHHHTTC-----------C------
T ss_pred hhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECC---CC---CEEEEEEHHHHHHHHHhcc-----------c------
Confidence 57788999999999999999999999999999975 56 8999999999998765311 1
Q ss_pred ccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 229 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 229 i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
.++++|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|++|.+|+++.+.
T Consensus 63 ------~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 63 ------TIEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFG 119 (122)
T ss_dssp ------BGGGTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC
T ss_pred ------CHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhh
Confidence 244557788999999999999999999999999999998899999999999998664
No 63
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.67 E-value=1e-16 Score=129.48 Aligned_cols=115 Identities=11% Similarity=0.109 Sum_probs=95.7
Q ss_pred CCCC--CceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccc
Q 017163 149 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 226 (376)
Q Consensus 149 ~~~~--~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~ 226 (376)
+|.+ +++++.+++++.+|++.|.+++++++||+++ +.| +++|++|.+|+++.+.... ...
T Consensus 8 iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~vGivt~~dl~~~~~~~~---------~~~---- 69 (127)
T 3nqr_A 8 IMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISE--DKD---HIEGILMAKDLLPFMRSDA---------EAF---- 69 (127)
T ss_dssp HSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGGSTTC---------CCC----
T ss_pred hcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHhccC---------CCC----
Confidence 4553 4889999999999999999999999999965 226 8999999999998653211 112
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 017163 227 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 290 (376)
Q Consensus 227 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~ 290 (376)
.++++|.+ +.++.+++++.+|+++|.+++++.+||+|++|+++|++|.+|+++.+
T Consensus 70 --------~v~~~m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 70 --------SMDKVLRT-AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp --------CHHHHCBC-CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC
T ss_pred --------CHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 34455754 67999999999999999999999999999999999999999998854
No 64
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.66 E-value=4e-16 Score=126.43 Aligned_cols=114 Identities=11% Similarity=0.132 Sum_probs=95.1
Q ss_pred CCC--CCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccc
Q 017163 149 PCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 226 (376)
Q Consensus 149 ~~~--~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~ 226 (376)
+|. .+++++.+++++.+|++.|.+++++++||+++ +.+ +++|++|.+|+++++.. ...
T Consensus 10 iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~~Givt~~dl~~~~~~-----------~~~---- 69 (129)
T 3jtf_A 10 IMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYED--DRD---NIIGILLAKDLLRYMLE-----------PAL---- 69 (129)
T ss_dssp HCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESS--STT---CEEEEEEGGGGGGGGTC-----------TTS----
T ss_pred hCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcC--CCC---cEEEEEEHHHHHhHhcc-----------CCc----
Confidence 455 57889999999999999999999999999965 226 89999999999885431 011
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 227 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 227 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
.++++|. ++.++.+++++.+|+++|.+++++.+||+|++|+++|++|.+|+++.+.
T Consensus 70 --------~v~~~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~ 125 (129)
T 3jtf_A 70 --------DIRSLVR-PAVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIV 125 (129)
T ss_dssp --------CGGGGCB-CCCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHH
T ss_pred --------CHHHHhC-CCeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 2344464 4789999999999999999999999999999999999999999998654
No 65
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.65 E-value=3.6e-16 Score=144.36 Aligned_cols=117 Identities=15% Similarity=0.244 Sum_probs=105.0
Q ss_pred cccccccCCCceEecCCCCHHHHHHHHHhC-----CCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHH
Q 017163 234 PRIGEANGRPFAMLRPTASLGSALALLVQA-----DVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQA 308 (376)
Q Consensus 234 ~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~-----~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~ 308 (376)
.+++++|.++++++++++++.+|++.|.++ +++++||+|++|+++|++|.+|++... .+.++.+
T Consensus 137 ~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~~----------~~~~v~~- 205 (286)
T 2oux_A 137 ETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVND----------DDTLIAD- 205 (286)
T ss_dssp TBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTSC----------TTSBHHH-
T ss_pred HHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcCC----------CCCcHHH-
Confidence 467788999999999999999999999988 889999999999999999999987621 1356777
Q ss_pred HhcCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHh
Q 017163 309 LQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 374 (376)
Q Consensus 309 l~~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~ 374 (376)
+|.+++.++.+++++.+|++.|.+++++++|||| ++|+++|+||..||++++.
T Consensus 206 ------------im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd-~~g~lvGiIT~~Dil~~i~ 258 (286)
T 2oux_A 206 ------------ILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTD-YDDHLLGIVTVDDIIDVID 258 (286)
T ss_dssp ------------HSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTCBEEEEEEHHHHHHHHH
T ss_pred ------------HcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEc-CCCeEEEEEEHHHHHHHHH
Confidence 7777899999999999999999999999999999 5799999999999999875
No 66
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.65 E-value=1.6e-16 Score=130.04 Aligned_cols=117 Identities=9% Similarity=0.093 Sum_probs=96.8
Q ss_pred CCC--CCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccc
Q 017163 149 PCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 226 (376)
Q Consensus 149 ~~~--~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~ 226 (376)
+|. .+++++.+++++.+|+++|.+++++++||++. +.+ +++|++|.+|+++++.... ....
T Consensus 8 iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~--~~~---~~vGivt~~dl~~~~~~~~--------~~~~---- 70 (136)
T 3lfr_A 8 IMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGE--SHD---DVLGVLLAKDLLPLILKAD--------GDSD---- 70 (136)
T ss_dssp HSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGGGSSS--------GGGC----
T ss_pred ccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHHhcc--------CCCc----
Confidence 455 56889999999999999999999999999965 226 8999999999998654210 0112
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 227 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 227 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
.+.++|.+ +.++.+++++.+|+++|.+++++.+||+|++|+++|++|.+|++..+.
T Consensus 71 --------~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 71 --------DVKKLLRP-ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp --------CGGGTCBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC-
T ss_pred --------CHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 34555755 889999999999999999999999999999999999999999998544
No 67
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.65 E-value=4e-16 Score=126.15 Aligned_cols=118 Identities=18% Similarity=0.175 Sum_probs=100.8
Q ss_pred CCCCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccc
Q 017163 147 GRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 226 (376)
Q Consensus 147 ~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~ 226 (376)
+++|.+++.++.+++++.+|++.|.+++.+.+||+|+ | +++|++|.+|+++.+.....
T Consensus 8 ~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~----~---~~~Givt~~dl~~~~~~~~~--------------- 65 (128)
T 3gby_A 8 SYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG----E---RYLGMVHLSRLLEGRKGWPT--------------- 65 (128)
T ss_dssp GGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET----T---EEEEEEEHHHHHTTCSSSCC---------------
T ss_pred HHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC----C---EEEEEEEHHHHHHHHhhCCc---------------
Confidence 3478889999999999999999999999999999963 5 89999999999874421100
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 227 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 227 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
....++++|.+++.++.+++++.+|++.|.+++++.+||+|++|+++|++|.+|+++.+.
T Consensus 66 -----~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 66 -----VKEKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp -----TTCBCCGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred -----ccCcHHHHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 002355668889999999999999999999999999999999999999999999998664
No 68
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.65 E-value=6e-16 Score=124.18 Aligned_cols=117 Identities=17% Similarity=0.216 Sum_probs=99.3
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccccc
Q 017163 149 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 228 (376)
Q Consensus 149 ~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 228 (376)
+|.++++++.+++++.+|++.|.+++.+.+||+| +| +++|++|.+|+++++...... ..
T Consensus 6 ~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~G~it~~dl~~~~~~~~~~-------~~------- 64 (125)
T 1pbj_A 6 VMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK----EG---VRVGIVTTWDVLEAIAEGDDL-------AE------- 64 (125)
T ss_dssp HCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE----TT---EEEEEEEHHHHHHHHHHTCCT-------TT-------
T ss_pred hcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe----CC---eeEEEEeHHHHHHHHhcCCcc-------cc-------
Confidence 5677899999999999999999999999999996 35 899999999999876542110 11
Q ss_pred ccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 017163 229 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 292 (376)
Q Consensus 229 i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~ 292 (376)
..++++|.+++.++.+++++.+|++.|.+++++.+||+|+ |+++|++|.+|+++.+.+
T Consensus 65 -----~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 65 -----VKVWEVMERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMA 122 (125)
T ss_dssp -----SBHHHHCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC-
T ss_pred -----cCHHHHcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 2345558888999999999999999999999999999997 999999999999986643
No 69
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.64 E-value=1.4e-15 Score=123.55 Aligned_cols=118 Identities=21% Similarity=0.312 Sum_probs=101.3
Q ss_pred CCCCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccc
Q 017163 147 GRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 226 (376)
Q Consensus 147 ~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~ 226 (376)
+++|.++++++.+++++.+|++.|.+++.+.+||+| +| +++|++|..|+++++..... ..
T Consensus 7 ~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~Givt~~dl~~~~~~~~~--------~~----- 66 (133)
T 2ef7_A 7 KEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD----GN---KPVGIITERDIVKAIGKGKS--------LE----- 66 (133)
T ss_dssp GGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHHHTTCC--------TT-----
T ss_pred HHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE----CC---EEEEEEcHHHHHHHHhcCCC--------cc-----
Confidence 347888899999999999999999999999999996 35 89999999999987654211 11
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 227 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 227 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
..+.++|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|++|..|+++...
T Consensus 67 -------~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 124 (133)
T 2ef7_A 67 -------TKAEEFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAID 124 (133)
T ss_dssp -------CBGGGTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred -------cCHHHHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 2345557778999999999999999999999999999998999999999999998664
No 70
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.64 E-value=3.6e-16 Score=130.56 Aligned_cols=116 Identities=11% Similarity=0.126 Sum_probs=99.6
Q ss_pred CCCC--CceEeCCCCCHHHHHHHHHhCCCceeEEE-ecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCccccccccc
Q 017163 149 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPII-HSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVS 225 (376)
Q Consensus 149 ~~~~--~~v~v~~~~sl~~a~~~m~~~~v~~lpVv-d~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~ 225 (376)
+|.+ +++++.+++++.+|++.|.+++++++||+ +. ..| +++|++|.+|+++++.... .
T Consensus 25 iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~--~~~---~lvGivt~~dl~~~~~~~~----------~---- 85 (153)
T 3oco_A 25 VMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADN--DKD---KIIGYAYNYDIVRQARIDD----------K---- 85 (153)
T ss_dssp HSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETT--EEE---EEEEEEEHHHHHHHHHHHT----------T----
T ss_pred EecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECC--CCC---cEEEEEEHHHHHhHHhcCC----------C----
Confidence 5654 78999999999999999999999999999 43 135 8999999999998765421 1
Q ss_pred cccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 017163 226 SIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 292 (376)
Q Consensus 226 ~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~ 292 (376)
..++++| +++.++.+++++.+|+++|.+++++.+||+|++|+++|++|.+|++..+..
T Consensus 86 --------~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 86 --------AKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp --------SBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC
T ss_pred --------CcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhc
Confidence 2345558 789999999999999999999999999999999999999999999987654
No 71
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.64 E-value=1.2e-15 Score=123.81 Aligned_cols=115 Identities=9% Similarity=0.126 Sum_probs=96.1
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCccccccccccccccc
Q 017163 152 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 231 (376)
Q Consensus 152 ~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~i~~ 231 (376)
.+++++.+++++.+|+++|.+++++++||+++ +++ +++|++|.+|+++++..... ...
T Consensus 12 ~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~--~~~---~lvGivt~~dl~~~~~~~~~-------~~~---------- 69 (130)
T 3hf7_A 12 NEIVGIDINDDWKSIVRQLTHSPHGRIVLYRD--SLD---DAISMLRVREAYRLMTEKKE-------FTK---------- 69 (130)
T ss_dssp GGCCEEETTSCHHHHHHHHHTCSSSEEEEESS--SGG---GEEEEEEHHHHHHHHTSSSC-------CCH----------
T ss_pred HHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcC--CCC---cEEEEEEHHHHHHHHhccCc-------cch----------
Confidence 46889999999999999999999999999953 246 89999999999987643210 001
Q ss_pred cccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 232 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 232 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
..++++| +++.++.+++++.+|+++|.+++++.+||+|++|+++|++|.+|++..+.
T Consensus 70 --~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 70 --EIMLRAA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIV 126 (130)
T ss_dssp --HHHHHHS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred --hhHHHhc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHh
Confidence 1344457 56789999999999999999999999999999999999999999998664
No 72
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.64 E-value=7.8e-16 Score=141.57 Aligned_cols=118 Identities=18% Similarity=0.268 Sum_probs=102.8
Q ss_pred cccccccCCCceEecCCCCHHHHHHHHHhC-----CCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHH
Q 017163 234 PRIGEANGRPFAMLRPTASLGSALALLVQA-----DVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQA 308 (376)
Q Consensus 234 ~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~-----~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~ 308 (376)
.+++++|.++++++.+++++.+|++.|.++ +++++||+|++|+++|++|.+|++... .+.++.+
T Consensus 135 ~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~----------~~~~v~~- 203 (278)
T 2yvy_A 135 DEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVAD----------PRTRVAE- 203 (278)
T ss_dssp TBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHSC----------TTCBSTT-
T ss_pred chHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcCC----------CCCcHHH-
Confidence 356777999999999999999999999987 789999999999999999999997621 1234444
Q ss_pred HhcCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHhc
Q 017163 309 LQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 309 l~~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~~ 375 (376)
+|.+++.++.+++++.+|++.|.+++.+++|||| ++|+++|+||..||++.+.+
T Consensus 204 ------------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 204 ------------IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD-EEGRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp ------------TSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHC--
T ss_pred ------------HhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEe-CCCeEEEEEEHHHHHHHHHH
Confidence 7878899999999999999999999999999999 47999999999999998753
No 73
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.64 E-value=1e-15 Score=128.77 Aligned_cols=127 Identities=17% Similarity=0.226 Sum_probs=103.4
Q ss_pred CCCCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccc
Q 017163 147 GRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 226 (376)
Q Consensus 147 ~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~ 226 (376)
+++|.++++++.+++++.+|+++|.+++++.+||+|+ +| +++|++|..|+++++...+..... .
T Consensus 8 ~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~---~~---~lvGivt~~dl~~~~~~~~~~~~~----------~ 71 (160)
T 2o16_A 8 EDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDA---NK---KLLGIVSQRDLLAAQESSLQRSAQ----------G 71 (160)
T ss_dssp GGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHHHHHHHHCC---------------
T ss_pred HHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHHHHHhhccccc----------c
Confidence 3477788999999999999999999999999999975 56 899999999999987653321100 0
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 227 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 227 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
.-......+.++|.+++.++.+++++.+|+++|.+++++.+||+|+ |+++|+||.+|+++.+.
T Consensus 72 -~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~ 134 (160)
T 2o16_A 72 -DSLAFETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAI 134 (160)
T ss_dssp -----CCCBHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHH
T ss_pred -cchhcccCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 0001123456678889999999999999999999999999999987 99999999999998654
No 74
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.64 E-value=3.4e-16 Score=129.91 Aligned_cols=133 Identities=18% Similarity=0.261 Sum_probs=101.7
Q ss_pred CCCCCC--CceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccc
Q 017163 147 GRPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPV 224 (376)
Q Consensus 147 ~~~~~~--~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i 224 (376)
+++|.+ +++++.+++++.+|++.|.+++++.+||+|+ ++ +++|++|..|+++++...... ..+. ..
T Consensus 8 ~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~G~vt~~dl~~~~~~~~~~-----~~~~-~~ 75 (152)
T 4gqw_A 8 GEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDE---DW---KLVGLVSDYDLLALDSGDSTW-----KTFN-AV 75 (152)
T ss_dssp GGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECT---TC---BEEEEEEHHHHTTCC----CC-----HHHH-HH
T ss_pred hhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeC---CC---eEEEEEEHHHHHHhhcccCcc-----cchH-HH
Confidence 346766 7999999999999999999999999999975 56 899999999998754321100 0000 00
Q ss_pred ccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 225 SSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 225 ~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
..+........+.++|.++++++.+++++.+|+++|.+++++.+||+|++|+++|+||.+|+++.+.
T Consensus 76 ~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~ 142 (152)
T 4gqw_A 76 QKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAAL 142 (152)
T ss_dssp HTC-----CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred HHHHHHhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHH
Confidence 0000011123566778888899999999999999999999999999999999999999999999765
No 75
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.63 E-value=3.7e-15 Score=134.31 Aligned_cols=211 Identities=12% Similarity=0.149 Sum_probs=132.5
Q ss_pred CCccccCCCCccEEEEcCCCCHHHHHHHHHHcCCCeeecccCCCCceeEEeeHHHHHHHHHHhccCCCCCCHHHHhhhhH
Q 017163 48 HTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTI 127 (376)
Q Consensus 48 ~~~~d~~p~~~~vi~l~~~~~v~~A~~~l~~~~i~~~PV~d~~~~~~vG~lt~~D~i~il~~~~~~~~~~~~~~l~~~~i 127 (376)
.++.|+|- .++++++.+.++.+|++.|.++++..+||+|++ ++++|++|..|++..+...... ........+.
T Consensus 7 ~~v~~im~--~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~-~~l~Giit~~di~~~~~~~~~~----~~~~~~~~~~ 79 (245)
T 3l2b_A 7 LKVEDLEM--DKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGN-NHLLGMLSTSNITATYMDIWDS----NILAKSATSL 79 (245)
T ss_dssp CBGGGSCC--BCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHHCCCCT----THHHHTTCCH
T ss_pred CcHHHhcC--CCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHhhhh----hhhhhccCCH
Confidence 46778884 568899999999999999999999999999975 5699999999999877532210 0011111122
Q ss_pred HHHHHHHHhhhcccccC------------------CCCCCCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCC
Q 017163 128 SAWKVGKLQLNLKRQMD------------------GNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGS 189 (376)
Q Consensus 128 ~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~ 189 (376)
..+.+.....- ..... ....+....++.+.. -.++...+.+.+++.+++.+.......
T Consensus 80 ~~v~~~l~~~~-l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgd---r~~~~~~~i~~~~~~liit~~~~~~~~ 155 (245)
T 3l2b_A 80 DNILDTLSAEA-QNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGD---RAEIQAELIELKVSLLIVTGGHTPSKE 155 (245)
T ss_dssp HHHHHHTTCEE-EECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECS---CHHHHHHHHHTTCSEEEECTTCCCCHH
T ss_pred HHHHHHhCCEE-EeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECC---CHHHHHHHHHcCCCEEEECCCCCCCHH
Confidence 22211110000 00000 001122344555533 378888999999999988843111100
Q ss_pred ------cceEEEeeehhhHHHHHhhhccCCCCCccccccccccccccccccccccccC-CCceEecCCCCHHHHHHHHHh
Q 017163 190 ------CQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANG-RPFAMLRPTASLGSALALLVQ 262 (376)
Q Consensus 190 ------~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~i~~~~~~v~~~m~-~~~~~v~~~~~l~~a~~~m~~ 262 (376)
...+-.+.+..|........ .....++++|+ +++.++++++++.+|+++|.+
T Consensus 156 v~~~a~~~~~~~i~t~~d~~~~~~~~---------------------~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~ 214 (245)
T 3l2b_A 156 IIELAKKNNITVITTPHDSFTASRLI---------------------VQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSE 214 (245)
T ss_dssp HHHHHHHHTCEEEECSSCHHHHHHHG---------------------GGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEeCCChHHHHHHH---------------------hcCCceeeEecCCccEEECCCCcHHHHHHHHHh
Confidence 00123344444433211110 11124667798 899999999999999999999
Q ss_pred CCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 017163 263 ADVSSIPIVDDNDSLLDIYSRSDITALA 290 (376)
Q Consensus 263 ~~i~~lpVvd~~g~lvGiis~~Di~~~~ 290 (376)
++++++||+|++|+++|++|.+|+++..
T Consensus 215 ~~~~~~pVvd~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 215 TRYSNYPVIDENNKVVGSIARFHLISTH 242 (245)
T ss_dssp HCCSEEEEECTTCBEEEEEECC------
T ss_pred cCCceEEEEcCCCeEEEEEEHHHhhchh
Confidence 9999999999999999999999998754
No 76
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.63 E-value=1.2e-15 Score=128.18 Aligned_cols=118 Identities=13% Similarity=0.206 Sum_probs=99.2
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCccccccccccc
Q 017163 148 RPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 227 (376)
Q Consensus 148 ~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l 227 (376)
++|.++ +++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..|+++++..... ....
T Consensus 21 ~im~~~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~-------~~~~----- 81 (159)
T 3fv6_A 21 DFQSIP-VVIHENVSVYDAICTMFLEDVGTLFVVDR---DA---VLVGVLSRKDLLRASIGQQE-------LTSV----- 81 (159)
T ss_dssp GSCBCC-CEEETTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHHTSCSC-------TTTC-----
T ss_pred HHcCCC-EEECCCCcHHHHHHHHHHCCCCEEEEEcC---CC---cEEEEEeHHHHHHHhhccCc-------ccCc-----
Confidence 467664 59999999999999999999999999975 56 89999999999987643211 0112
Q ss_pred cccccccccccccCC--CceEecCCCCHHHHHHHHHhCCCCEEEEECCCC---cEEEEEeHHHHHHHHh
Q 017163 228 QLGTWVPRIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDND---SLLDIYSRSDITALAK 291 (376)
Q Consensus 228 ~i~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g---~lvGiis~~Di~~~~~ 291 (376)
.+.++|.+ ++.++.+++++.+|+++|.+++++++||+|++| +++|+||.+|+++.+.
T Consensus 82 -------~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~ 143 (159)
T 3fv6_A 82 -------PVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILV 143 (159)
T ss_dssp -------BGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHH
T ss_pred -------CHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHH
Confidence 34555776 889999999999999999999999999999888 9999999999998665
No 77
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.63 E-value=1.4e-15 Score=124.36 Aligned_cols=119 Identities=21% Similarity=0.380 Sum_probs=100.3
Q ss_pred CCCCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhH-HHHHhhhccCCCCCccccccccc
Q 017163 147 GRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDI-LKCICRHFKHSSSSLPILQQPVS 225 (376)
Q Consensus 147 ~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~di-l~~l~~~~~~~~~~~~~~~~~i~ 225 (376)
+.+|.++++++.+++++.+|++.|.+++.+.+||+|+ +| +++|++|..|+ ++++.... ...
T Consensus 11 ~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~--------~~~---- 72 (138)
T 2p9m_A 11 KDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDD---EN---KVIGIVTTTDIGYNLIRDKY--------TLE---- 72 (138)
T ss_dssp GGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECT---TC---BEEEEEEHHHHHHHHTTTCC--------CSS----
T ss_pred HHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECC---CC---eEEEEEEHHHHHHHHHhhcc--------cCC----
Confidence 3477788999999999999999999999999999975 56 89999999999 87654210 011
Q ss_pred cccccccccccccccCCCceEecCCCCHHHHHHHHHhCC-----CCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 226 SIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQAD-----VSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 226 ~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~-----i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
..++++|.+++.++.+++++.+|++.|.+++ ++.+||+|++|+++|++|.+|+++.+.
T Consensus 73 --------~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 73 --------TTIGDVMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp --------CBHHHHSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred --------cCHHHHhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 2355568888999999999999999999999 999999998999999999999998654
No 78
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.63 E-value=2.4e-15 Score=122.99 Aligned_cols=120 Identities=15% Similarity=0.281 Sum_probs=100.7
Q ss_pred CCCCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccc
Q 017163 147 GRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 226 (376)
Q Consensus 147 ~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~ 226 (376)
+.+|.++++++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..|+++.+.....
T Consensus 10 ~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~--------------- 68 (138)
T 2yzi_A 10 KVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVIND---DG---NVVGFFTKSDIIRRVIVPGL--------------- 68 (138)
T ss_dssp GGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHTTTTCC---------------
T ss_pred HHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHHHHhcCC---------------
Confidence 4578889999999999999999999999999999975 56 89999999999843221100
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 017163 227 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 292 (376)
Q Consensus 227 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~ 292 (376)
.....+.++|.+++.++.+++++.+|++.|.+++++++ |+|++|+++|++|.+|+++.+..
T Consensus 69 ----~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~ 129 (138)
T 2yzi_A 69 ----PYDIPVERIMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRR 129 (138)
T ss_dssp ----CTTSBGGGTCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHC
T ss_pred ----cccCCHHHHhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHH
Confidence 01124556688899999999999999999999999999 99989999999999999987654
No 79
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.63 E-value=3.7e-15 Score=124.89 Aligned_cols=133 Identities=14% Similarity=0.181 Sum_probs=102.6
Q ss_pred CCCCCCCceEeCCCCCHHHHHHHHHhCCCce-eEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCccccccccc
Q 017163 147 GRPCPRPLVQAGPYDSLKEVALKILQNKVAT-VPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVS 225 (376)
Q Consensus 147 ~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~-lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~ 225 (376)
+++|.++++++.+++++.+|++.|.+++++. +||+|+ + +++|++|..|+++++...+.........+.....
T Consensus 19 ~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~----~---~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 91 (157)
T 1o50_A 19 CKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARD----N---KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMK 91 (157)
T ss_dssp TTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEET----T---EEEEEEEHHHHHHHHHHHHHCCCC-------CCC
T ss_pred hhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEEC----C---EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHH
Confidence 4578899999999999999999999999999 999975 2 6999999999998765221000000000000000
Q ss_pred cccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 226 SIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 226 ~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
......+.++|.+ +.++.+++++.+|+++|.+++++.+||+|++|+++|+||.+|+++.+.
T Consensus 92 ----~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 92 ----RLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALW 152 (157)
T ss_dssp ----CCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred ----HHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 0112356677888 999999999999999999999999999998999999999999998664
No 80
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.63 E-value=8.8e-16 Score=127.52 Aligned_cols=122 Identities=15% Similarity=0.172 Sum_probs=99.7
Q ss_pred CCC--CCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccc
Q 017163 149 PCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 226 (376)
Q Consensus 149 ~~~--~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~ 226 (376)
+|. .+++++.+++++.+|++.|.+++++++||+|. +| +++|++|..|+++++....... ...
T Consensus 20 im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~---~~---~~~Givt~~dl~~~~~~~~~~~----------~~~ 83 (150)
T 3lqn_A 20 LMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDP---MY---KLHGLISTAMILDGILGLERIE----------FER 83 (150)
T ss_dssp HSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHHHHTBCSSSBC----------GGG
T ss_pred cccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECC---CC---CEEEEEEHHHHHHHHHhhcccc----------hhH
Confidence 355 46889999999999999999999999999975 56 8999999999998764321100 000
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 017163 227 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 292 (376)
Q Consensus 227 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~ 292 (376)
.....++++|.+++.++.+++++.+|+++|.++++ +||+|++|+++|++|.+|+++.+..
T Consensus 84 ----~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~ 143 (150)
T 3lqn_A 84 ----LEEMKVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNK 143 (150)
T ss_dssp ----GGGCBGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred ----HhcCCHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHH
Confidence 01234667788899999999999999999999987 9999999999999999999997653
No 81
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.62 E-value=3.5e-15 Score=126.12 Aligned_cols=116 Identities=18% Similarity=0.273 Sum_probs=99.5
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCccccccccccccccc
Q 017163 152 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 231 (376)
Q Consensus 152 ~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~i~~ 231 (376)
.+++++.+++++.+|+++|.+++++.+||+|+ +| +++|++|..|+++++...... ...
T Consensus 35 ~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~~------~~~---------- 92 (165)
T 3fhm_A 35 RDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDA---DG---VVLGIFTERDLVKAVAGQGAA------SLQ---------- 92 (165)
T ss_dssp SCCCEECTTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHHHHHGGG------GGT----------
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC---CC---eEEEEEEHHHHHHHHHhcCCc------ccc----------
Confidence 36889999999999999999999999999975 56 899999999999987654211 011
Q ss_pred cccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 017163 232 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 292 (376)
Q Consensus 232 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~ 292 (376)
..+.++|.+++.++.+++++.+|+++|.+++++++||+|+ |+++|+||..|++..+..
T Consensus 93 --~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 93 --QSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp --SBGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTC
T ss_pred --CCHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 2355568888999999999999999999999999999998 999999999999997653
No 82
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.62 E-value=3.6e-15 Score=127.30 Aligned_cols=121 Identities=7% Similarity=0.050 Sum_probs=100.8
Q ss_pred CCCCCCCC--CCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCccccc
Q 017163 144 DGNGRPCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQ 221 (376)
Q Consensus 144 ~~~~~~~~--~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~ 221 (376)
..++.+|. .+++++.+++++.+|+++|.+++++++||++. ..+ +++|++|.+|+++++.... .
T Consensus 36 ~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~Dl~~~~~~~~----------~ 100 (173)
T 3ocm_A 36 RSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRG--SLD---EVVGIGRAKDLVADLITEG----------R 100 (173)
T ss_dssp SCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESS--STT---SEEEEEEHHHHHHHHHHHS----------S
T ss_pred CCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---CEEEEEEHHHHHHHHhcCC----------c
Confidence 34566885 46899999999999999999999999999965 226 8999999999998765321 1
Q ss_pred cccccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcc
Q 017163 222 QPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 293 (376)
Q Consensus 222 ~~i~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~ 293 (376)
.+ +. |.++++++.+++++.+|+++|.+++++.+||+|++|+++|+||..|++..+...
T Consensus 101 ~~------------v~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~ 158 (173)
T 3ocm_A 101 VR------------RN--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGE 158 (173)
T ss_dssp CC------------GG--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCC
T ss_pred ch------------hH--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCc
Confidence 11 22 235678999999999999999999999999999999999999999999977643
No 83
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.62 E-value=4.7e-15 Score=121.79 Aligned_cols=119 Identities=18% Similarity=0.267 Sum_probs=99.7
Q ss_pred CCCCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccc
Q 017163 147 GRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 226 (376)
Q Consensus 147 ~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~ 226 (376)
+++|.++++++.+++++.+|++.|.+++++.+||+|+ ++ ..+++|++|..|+++++..... ..
T Consensus 8 ~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~-~~~~~Givt~~dl~~~~~~~~~--------~~----- 70 (141)
T 2rih_A 8 SELLKRPPVSLPETATIREVATELAKNRVGLAVLTAR---DN-PKRPVAVVSERDILRAVAQRLD--------LD----- 70 (141)
T ss_dssp GGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEET---TE-EEEEEEEEEHHHHHHHHHTTCC--------TT-----
T ss_pred HHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC---CC-cceeEEEEEHHHHHHHHhcCCC--------CC-----
Confidence 3478889999999999999999999999999999975 21 1159999999999987653211 11
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 017163 227 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 290 (376)
Q Consensus 227 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~ 290 (376)
..+.++|.+++.++.++ ++.+|++.|.+++++.+||+|++|+++|++|.+|+++..
T Consensus 71 -------~~v~~~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~ 126 (141)
T 2rih_A 71 -------GPAMPIANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFER 126 (141)
T ss_dssp -------SBSGGGCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCH
T ss_pred -------CCHHHHcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHH
Confidence 23455588899999999 999999999999999999999899999999999998744
No 84
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.62 E-value=1.5e-15 Score=126.06 Aligned_cols=116 Identities=16% Similarity=0.227 Sum_probs=98.5
Q ss_pred CCCCCC--CceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccc
Q 017163 147 GRPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPV 224 (376)
Q Consensus 147 ~~~~~~--~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i 224 (376)
+++|.+ +++++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..|+++++..... ....
T Consensus 31 ~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~-------~~~~-- 95 (149)
T 3k2v_A 31 NDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDD---DM---NIIGIFTDGDLRRVFDTGVD-------MRDA-- 95 (149)
T ss_dssp GGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECT---TC---BEEEEEEHHHHHHHHCSSSC-------CTTC--
T ss_pred HHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECC---CC---cEEEEecHHHHHHHHhcCCC-------cccC--
Confidence 347888 8999999999999999999999999999975 56 89999999999987643211 1122
Q ss_pred ccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHH
Q 017163 225 SSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA 288 (376)
Q Consensus 225 ~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~ 288 (376)
.++++|.+++.++.+++++.+|++.|.+++++.+||+|++ +++|+||.+|+++
T Consensus 96 ----------~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 96 ----------SIADVMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp ----------BHHHHSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred ----------cHHHHcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 3455587888999999999999999999999999999865 9999999999864
No 85
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.61 E-value=4.9e-15 Score=123.44 Aligned_cols=115 Identities=19% Similarity=0.231 Sum_probs=96.6
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCccccccccccccccc
Q 017163 152 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 231 (376)
Q Consensus 152 ~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~i~~ 231 (376)
++++++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..|+++++..... .....+
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~~---~~vGivt~~dl~~~~~~~~~------~~~~~~-------- 88 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDE---KG---RVVDIYSKFDVINLAAEKTY------NNLDVS-------- 88 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECT---TS---BEEEEEEHHHHHHHHHCSSC------CCTTSB--------
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEECC---CC---cEEEEEeHHHHHHHhcchhh------hhhcch--------
Confidence 67889999999999999999999999999975 56 89999999999987653210 001222
Q ss_pred cccccccccC------CCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 017163 232 WVPRIGEANG------RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 290 (376)
Q Consensus 232 ~~~~v~~~m~------~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~ 290 (376)
+.++|. +++.++.+++++.+|+++|.+++++.+||+|++|+++|++|.+|+++.+
T Consensus 89 ----v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 89 ----VTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp ----GGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred ----HHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHH
Confidence 334454 6889999999999999999999999999999889999999999998865
No 86
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.61 E-value=3.3e-15 Score=128.69 Aligned_cols=121 Identities=13% Similarity=0.128 Sum_probs=102.6
Q ss_pred CCCCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccc
Q 017163 147 GRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 226 (376)
Q Consensus 147 ~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~ 226 (376)
+.+|.++++++.+++++.+|+++|.+++++++||+++ +| +++|++|.+|+++++......
T Consensus 12 ~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~---~g---~~vGivt~~dl~~~~~~~~~~-------------- 71 (184)
T 1pvm_A 12 EKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDD---NG---NDVGLLSERSIIKRFIPRNKK-------------- 71 (184)
T ss_dssp GGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECT---TS---CEEEEEEHHHHHHHTGGGCCC--------------
T ss_pred HHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHHHhhcccC--------------
Confidence 4478889999999999999999999999999999975 46 899999999999866432100
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 227 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 227 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
.....++++|.+++.++.+++++.+|+++|.+++++.+||+|++|+++|+||..|+++.+.
T Consensus 72 ----~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 72 ----PDEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp ----GGGSBGGGTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSC
T ss_pred ----cccCCHHHHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 0112456668888999999999999999999999999999998899999999999987554
No 87
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.61 E-value=4.5e-15 Score=124.36 Aligned_cols=114 Identities=14% Similarity=0.146 Sum_probs=95.8
Q ss_pred CCCCCCC--CceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCccccccc
Q 017163 146 NGRPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQP 223 (376)
Q Consensus 146 ~~~~~~~--~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~ 223 (376)
++++|.+ +++++.+++++.+|++.|.+++++++||+++ +.+ +++|++|.+|+++++... ...
T Consensus 40 v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~----------~~~- 103 (156)
T 3oi8_A 40 VRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGE--DKD---EVLGILHAKDLLKYMFNP----------EQF- 103 (156)
T ss_dssp GGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGSSCG----------GGC-
T ss_pred HhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHHcC----------Ccc-
Confidence 4557775 7899999999999999999999999999965 235 799999999998854221 112
Q ss_pred cccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHH
Q 017163 224 VSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDIT 287 (376)
Q Consensus 224 i~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~ 287 (376)
.++++|.+ +.++.+++++.+|+++|.+++++.+||+|++|+++|++|..|++
T Consensus 104 -----------~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 104 -----------HLKSILRP-AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp -----------CHHHHCBC-CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred -----------cHHHHcCC-CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 34455754 78999999999999999999999999999999999999999985
No 88
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.61 E-value=3.1e-15 Score=123.00 Aligned_cols=119 Identities=22% Similarity=0.231 Sum_probs=97.0
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccccc
Q 017163 149 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 228 (376)
Q Consensus 149 ~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 228 (376)
+|.++++++.+++++.+|++.|.+++++++||+|+ +| +++|++|..|+++++..... .....+
T Consensus 16 ~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~------~~~~~~----- 78 (144)
T 2nyc_A 16 ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE---NG---YLINVYEAYDVLGLIKGGIY------NDLSLS----- 78 (144)
T ss_dssp CBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHHHHHHTC----------CCSB-----
T ss_pred CCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcC---CC---cEEEEEcHHHHHHHhccccc------ccCCcc-----
Confidence 56788999999999999999999999999999975 46 89999999999987653210 011222
Q ss_pred ccccccccccccCC------CceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 229 LGTWVPRIGEANGR------PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 229 i~~~~~~v~~~m~~------~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
+.++|.+ ++.++.+++++.+|++.|.+++++.+||+|++|+++|++|.+|+++.+.
T Consensus 79 -------v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 79 -------VGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp -------HHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred -------HHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 3334543 6889999999999999999999999999998999999999999998654
No 89
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.61 E-value=5.7e-15 Score=123.46 Aligned_cols=125 Identities=15% Similarity=0.210 Sum_probs=101.5
Q ss_pred CCCCCCC--CceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCccccccc
Q 017163 146 NGRPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQP 223 (376)
Q Consensus 146 ~~~~~~~--~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~ 223 (376)
++++|.+ +++++.+++++.+|++.|.+++++++||+|+ +| +++|++|..|+++++...... .
T Consensus 13 v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~~---~~~Givt~~dl~~~~~~~~~~--------~-- 76 (157)
T 2emq_A 13 VKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDT---SY---KLHGLISMTMMMDAILGLERI--------E-- 76 (157)
T ss_dssp STTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECT---TC---CEEEEEEHHHHHHHSBCSSSB--------C--
T ss_pred HHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcC---CC---CEEEEeeHHHHHHHHhccccc--------c--
Confidence 3457775 8899999999999999999999999999975 56 899999999999865431100 0
Q ss_pred cccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 017163 224 VSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 292 (376)
Q Consensus 224 i~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~ 292 (376)
.. ......+.++|.+++.++.+++++.+|++.|.++++ +||+|++|+++|+||.+|++..+..
T Consensus 77 ~~----~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~ 139 (157)
T 2emq_A 77 FE----RLETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNK 139 (157)
T ss_dssp GG----GGGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHH
T ss_pred hH----HhcCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 00 001234566788899999999999999999999987 9999989999999999999987653
No 90
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.61 E-value=5.7e-16 Score=125.88 Aligned_cols=116 Identities=16% Similarity=0.257 Sum_probs=97.5
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHH-HHhhhccCCCCCccccccccccc
Q 017163 149 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK-CICRHFKHSSSSLPILQQPVSSI 227 (376)
Q Consensus 149 ~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~-~l~~~~~~~~~~~~~~~~~i~~l 227 (376)
+|.++++++.+++++.+|++.|.+++.+.+||+|+ +| +++|++|..|+++ ++.....
T Consensus 13 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~~---------------- 70 (133)
T 1y5h_A 13 IMNAGVTCVGEHETLTAAAQYMREHDIGALPICGD---DD---RLHGMLTDRDIVIKGLAAGLD---------------- 70 (133)
T ss_dssp HSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECG---GG---BEEEEEEHHHHHHTTGGGTCC----------------
T ss_pred HhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECC---CC---eEEEEEeHHHHHHHHHhcCCC----------------
Confidence 46678889999999999999999999999999975 46 8999999999984 4432110
Q ss_pred cccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 017163 228 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 290 (376)
Q Consensus 228 ~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~ 290 (376)
.....++++|.+++.++.+++++.+|+++|.+++.+++||+|+ |+++|++|.+|+++.+
T Consensus 71 ---~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 71 ---PNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHL 129 (133)
T ss_dssp ---TTTSBHHHHHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTC
T ss_pred ---ccccCHHHHhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 0112455668889999999999999999999999999999997 9999999999998854
No 91
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.60 E-value=1.7e-15 Score=126.72 Aligned_cols=121 Identities=17% Similarity=0.182 Sum_probs=99.5
Q ss_pred CCC--CCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccc
Q 017163 149 PCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 226 (376)
Q Consensus 149 ~~~--~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~ 226 (376)
+|. .+++++.+++++.+|++.|.+++++++||+|+ +| +++|++|..|+++++....... ...
T Consensus 20 im~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~---~~---~~~Giit~~dl~~~~~~~~~~~---~~~------- 83 (156)
T 3ctu_A 20 FLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD---EK---QFVGTIGLRDIMAYQMEHDLSQ---EIM------- 83 (156)
T ss_dssp GEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC----C---BEEEEEEHHHHHHHHHHHTCCH---HHH-------
T ss_pred HcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECC---CC---EEEEEEcHHHHHHHHHhccccc---ccc-------
Confidence 566 67899999999999999999999999999975 56 8999999999999876421100 000
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 017163 227 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 292 (376)
Q Consensus 227 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~ 292 (376)
....++++|.+++.++.+++++.+|++.|.+++ .+||+|++|+++|++|.+|+++.+.+
T Consensus 84 -----~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~ 142 (156)
T 3ctu_A 84 -----ADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp -----TTSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHH
T ss_pred -----ccCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 112455668889999999999999999999886 79999999999999999999997754
No 92
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.60 E-value=3.5e-15 Score=121.56 Aligned_cols=114 Identities=18% Similarity=0.281 Sum_probs=96.6
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCccccccccccccccc
Q 017163 152 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 231 (376)
Q Consensus 152 ~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~i~~ 231 (376)
++++++.+++++.+|++.|.+++++.+||+| +| +++|++|..|+++.+..... ..
T Consensus 17 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~Givt~~dl~~~~~~~~~------~~------------ 71 (135)
T 2rc3_A 17 HTVVAIGPDDSVFNAMQKMAADNIGALLVMK----DE---KLVGILTERDFSRKSYLLDK------PV------------ 71 (135)
T ss_dssp CCCCEECTTSBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHGGGSSS------CG------------
T ss_pred CCcEEECCCCcHHHHHHHHHhcCCCEEEEEE----CC---EEEEEEehHHHHHHHHHcCC------Cc------------
Confidence 6889999999999999999999999999996 35 89999999999874432110 00
Q ss_pred cccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 232 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 232 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
....+.++|.+++.++.+++++.+|+++|.+++++.+||+| +|+++|++|.+|+++.+.
T Consensus 72 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 72 KDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp GGSBGGGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred ccCCHHHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHH
Confidence 11245666888999999999999999999999999999999 799999999999998664
No 93
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.59 E-value=3.9e-15 Score=148.89 Aligned_cols=123 Identities=19% Similarity=0.235 Sum_probs=105.8
Q ss_pred cccccccCCCceEecCC-CCHHHHHHHHHhCCCCEEEEEC-CCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 017163 234 PRIGEANGRPFAMLRPT-ASLGSALALLVQADVSSIPIVD-DNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 311 (376)
Q Consensus 234 ~~v~~~m~~~~~~v~~~-~~l~~a~~~m~~~~i~~lpVvd-~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 311 (376)
.+++++|.++++++.++ +++.+|+++|.+++++++||+| ++|+++|+||.+||++.+..+... .+.++.+
T Consensus 384 ~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~----~~~~V~~---- 455 (527)
T 3pc3_A 384 LAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQ----QSDPAIK---- 455 (527)
T ss_dssp SBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCC----TTSBGGG----
T ss_pred CcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCc----CCCcHHH----
Confidence 46888999999999999 9999999999999999999999 789999999999999866543211 1356666
Q ss_pred CCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCC---CCeEEEEEeHHHHHHHHhc
Q 017163 312 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAG---SKRVEGIISLSDVFRFLLG 375 (376)
Q Consensus 312 ~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~---~~~~~GvIs~~Dil~~l~~ 375 (376)
+|.+++.++.+++++.+|++.|.++++ +||||++ .|+++||||..||++++..
T Consensus 456 ---------im~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~ 511 (527)
T 3pc3_A 456 ---------ALNKRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAA 511 (527)
T ss_dssp ---------GEETTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHT
T ss_pred ---------HhcCCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHh
Confidence 788899999999999999999987775 6999942 3899999999999999864
No 94
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.58 E-value=1.3e-14 Score=133.41 Aligned_cols=121 Identities=17% Similarity=0.246 Sum_probs=104.2
Q ss_pred cccCCCCCCCCCCceEeCCCCCHHHHHHHHHhC-----CCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCC
Q 017163 141 RQMDGNGRPCPRPLVQAGPYDSLKEVALKILQN-----KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSS 215 (376)
Q Consensus 141 ~~~~~~~~~~~~~~v~v~~~~sl~~a~~~m~~~-----~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~ 215 (376)
+....++.+|.++++++.+++++.+|++.|.++ +++++||+|. ++ +++|++|.+|++...
T Consensus 132 ~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~---~~---~lvGivt~~dll~~~--------- 196 (278)
T 2yvy_A 132 YEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE---KG---RLKGVLSLRDLIVAD--------- 196 (278)
T ss_dssp SCTTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECT---TC---BEEEEEEHHHHHHSC---------
T ss_pred CCcchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECC---CC---CEEEEEEHHHHhcCC---------
Confidence 566777889999999999999999999999987 7899999975 56 899999999998620
Q ss_pred CccccccccccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 017163 216 SLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 292 (376)
Q Consensus 216 ~~~~~~~~i~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~ 292 (376)
.. ..++++|.++++++++++++.+|++.|.+++++.+||||++|+++|+||..|++..+.+
T Consensus 197 ----~~------------~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 197 ----PR------------TRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp ----TT------------CBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC--
T ss_pred ----CC------------CcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 11 23455588889999999999999999999999999999999999999999999986653
No 95
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.57 E-value=2.5e-15 Score=128.50 Aligned_cols=137 Identities=18% Similarity=0.258 Sum_probs=100.5
Q ss_pred CCCC--CceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCC--CCCcccccccc
Q 017163 149 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHS--SSSLPILQQPV 224 (376)
Q Consensus 149 ~~~~--~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~--~~~~~~~~~~i 224 (376)
+|.+ +++++.+++++.+|+++|.+++++.+||+|+ ++ +++|++|..|++++........ ....+......
T Consensus 9 im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~---~~---~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 82 (180)
T 3sl7_A 9 FMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDD---NW---TLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTW 82 (180)
T ss_dssp HSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHTCC-------------------CC
T ss_pred hcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECC---CC---eEEEEEEHHHHHhhhhhccccCCcccccccccchh
Confidence 4555 7899999999999999999999999999975 56 8999999999986432111000 00000000000
Q ss_pred ------ccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 225 ------SSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 225 ------~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
..+........++++|.+++.++.+++++.+|+++|.+++++.+||+|++|+++|+||.+|+++.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~ 155 (180)
T 3sl7_A 83 KTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAAL 155 (180)
T ss_dssp CSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred hhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 0000011223567789888999999999999999999999999999999999999999999998664
No 96
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.57 E-value=1.1e-14 Score=134.28 Aligned_cols=121 Identities=14% Similarity=0.186 Sum_probs=105.1
Q ss_pred cccCCCCCCCCCCceEeCCCCCHHHHHHHHHhC-----CCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCC
Q 017163 141 RQMDGNGRPCPRPLVQAGPYDSLKEVALKILQN-----KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSS 215 (376)
Q Consensus 141 ~~~~~~~~~~~~~~v~v~~~~sl~~a~~~m~~~-----~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~ 215 (376)
+....++.+|.++++++.+++++.+|++.|.++ +++++||+|. +| +++|++|.+|++...
T Consensus 134 ~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~---~~---~lvGivt~~dll~~~--------- 198 (286)
T 2oux_A 134 YEDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQ---EN---HLVGVISLRDLIVND--------- 198 (286)
T ss_dssp SCTTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECT---TC---BEEEEEEHHHHTTSC---------
T ss_pred CChHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcC---CC---eEEEEEEHHHHHcCC---------
Confidence 566667788999999999999999999999987 8899999975 56 899999999997620
Q ss_pred CccccccccccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 017163 216 SLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 292 (376)
Q Consensus 216 ~~~~~~~~i~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~ 292 (376)
.. ..++++|.++++++++++++.+|+++|.+++++++||||++|+++|+||..|++..+.+
T Consensus 199 ----~~------------~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 199 ----DD------------TLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp ----TT------------SBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred ----CC------------CcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 11 23455588889999999999999999999999999999999999999999999987653
No 97
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.57 E-value=1.9e-14 Score=120.35 Aligned_cols=117 Identities=13% Similarity=0.238 Sum_probs=98.9
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCccccccccccccccc
Q 017163 152 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 231 (376)
Q Consensus 152 ~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~i~~ 231 (376)
++++++.+++++.+|++.|.+++++.+||.+ +| +++|++|..|+++++...... ...
T Consensus 21 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~----~~---~~~Givt~~dl~~~~~~~~~~------~~~---------- 77 (157)
T 4fry_A 21 RTIYTVTKNDFVYDAIKLMAEKGIGALLVVD----GD---DIAGIVTERDYARKVVLQERS------SKA---------- 77 (157)
T ss_dssp CCCCEEETTSBHHHHHHHHHHHTCSEEEEES----SS---SEEEEEEHHHHHHHSGGGTCC------SSS----------
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCEEEEee----CC---EEEEEEEHHHHHHHHHhccCC------ccc----------
Confidence 6789999999999999999999999999963 46 899999999999876543211 011
Q ss_pred cccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhccc
Q 017163 232 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKA 294 (376)
Q Consensus 232 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~ 294 (376)
..++++|.+++.++.+++++.+|+++|.+++++.+||+| +|+++|++|.+|+++.+....
T Consensus 78 --~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~~ 137 (157)
T 4fry_A 78 --TRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQ 137 (157)
T ss_dssp --CBHHHHSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTC
T ss_pred --cCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHHH
Confidence 245556888899999999999999999999999999998 799999999999999776443
No 98
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.56 E-value=3.3e-14 Score=128.12 Aligned_cols=141 Identities=12% Similarity=0.133 Sum_probs=103.9
Q ss_pred CCCCCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCC----------
Q 017163 146 NGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSS---------- 215 (376)
Q Consensus 146 ~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~---------- 215 (376)
++++|.++++++.+++++.+|+++|.+++++++||+++ .+++ +++|+||.+|+++.+.........
T Consensus 15 v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~-~~~~---~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~~~ 90 (250)
T 2d4z_A 15 VGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDT-PDTN---TLLGSIDRTEVEGLLQRRISAYRRQPAAAAEADE 90 (250)
T ss_dssp TTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCBCC
T ss_pred hHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEec-CCCC---eEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcccc
Confidence 46789999999999999999999999999999999974 2235 799999999999887544211000
Q ss_pred -----------------Cccccccc--------------------------------------------------ccc--
Q 017163 216 -----------------SLPILQQP--------------------------------------------------VSS-- 226 (376)
Q Consensus 216 -----------------~~~~~~~~--------------------------------------------------i~~-- 226 (376)
...+.... ...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (250)
T 2d4z_A 91 EGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFEEM 170 (250)
T ss_dssp C---------------------------------------------------------------------------CCSC
T ss_pred cccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccccc
Confidence 00000000 000
Q ss_pred cc---cccc-----cccc--c-cccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 227 IQ---LGTW-----VPRI--G-EANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 227 l~---i~~~-----~~~v--~-~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
+. ...| ...+ . .+|.+.++++.+++++.+|..+|...|++++||++ .|+++|+||+.|+++++.
T Consensus 171 i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~ 245 (250)
T 2d4z_A 171 LTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIE 245 (250)
T ss_dssp CBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred cChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 00 0001 1122 2 35888999999999999999999999999999996 799999999999999775
No 99
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.56 E-value=9.5e-15 Score=122.55 Aligned_cols=122 Identities=9% Similarity=0.105 Sum_probs=99.0
Q ss_pred CCCC--CceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccc
Q 017163 149 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 226 (376)
Q Consensus 149 ~~~~--~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~ 226 (376)
+|.+ +++++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..|+++++...... ....
T Consensus 19 im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~---~~---~lvGivt~~dl~~~~~~~~~~----------~~~~ 82 (159)
T 1yav_A 19 FMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDP---SY---RLHGLIGTNMIMNSIFGLERI----------EFEK 82 (159)
T ss_dssp HSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECT---TC---BEEEEEEHHHHHHHHBCSSSB----------CGGG
T ss_pred HhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECC---CC---CEEEEeEHHHHHHHhhhhccc----------chhh
Confidence 4555 7889999999999999999999999999975 56 899999999999876432100 0000
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 017163 227 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 292 (376)
Q Consensus 227 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~ 292 (376)
.....+.++|.+++.++.+++++.+|+++|.++++ +||+|++|+++|+||++|+++.+..
T Consensus 83 ----~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~ 142 (159)
T 1yav_A 83 ----LDQITVEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNK 142 (159)
T ss_dssp ----TTTSBHHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred ----hccCCHHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 01124566688899999999999999999999887 9999989999999999999987653
No 100
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.54 E-value=5.2e-14 Score=138.61 Aligned_cols=121 Identities=17% Similarity=0.257 Sum_probs=105.6
Q ss_pred cccCCCCCCCCCCceEeCCCCCHHHHHHHHHhC-----CCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCC
Q 017163 141 RQMDGNGRPCPRPLVQAGPYDSLKEVALKILQN-----KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSS 215 (376)
Q Consensus 141 ~~~~~~~~~~~~~~v~v~~~~sl~~a~~~m~~~-----~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~ 215 (376)
|....++++|.++++++++++++.+|++.|.++ +++++||+|+ ++ +++|++|.+|++.. .
T Consensus 152 ~~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~---~~---~lvGiVt~~Dll~~------~--- 216 (473)
T 2zy9_A 152 YEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE---KG---RLKGVLSLRDLIVA------D--- 216 (473)
T ss_dssp SCTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECT---TS---BEEEEEEHHHHHHS------C---
T ss_pred CCCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECC---CC---cEEEEEEHHHHhcC------C---
Confidence 677788999999999999999999999999986 5899999975 46 89999999999861 0
Q ss_pred CccccccccccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 017163 216 SLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 292 (376)
Q Consensus 216 ~~~~~~~~i~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~ 292 (376)
... .++++|.++++++++++++.+|++.|.++++..+||||++|+++|+||..|++....+
T Consensus 217 ----~~~------------~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 217 ----PRT------------RVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp ----TTS------------BGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred ----CCC------------cHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHH
Confidence 112 3455588899999999999999999999999999999999999999999999986653
No 101
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.54 E-value=3.3e-14 Score=119.51 Aligned_cols=124 Identities=14% Similarity=0.147 Sum_probs=97.4
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccccc
Q 017163 149 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 228 (376)
Q Consensus 149 ~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 228 (376)
+|.++++++.+++++.+|++.|.+++++++||+|++ ++| +++|++|..|+++++....... ......
T Consensus 18 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~-~~~---~~~Givt~~dl~~~~~~~~~~~---~~~~~~------ 84 (164)
T 2pfi_A 18 FMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVEST-ESQ---ILVGIVQRAQLVQALQAEPPSR---APGHQQ------ 84 (164)
T ss_dssp HCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCT-TTC---BEEEEEEHHHHHHHHHC----------CCCC------
T ss_pred HcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecC-CCC---EEEEEEEHHHHHHHHHhhcccc---CCcccc------
Confidence 577789999999999999999999999999999631 246 8999999999998775322110 000112
Q ss_pred ccccccccccccCCC------ceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 017163 229 LGTWVPRIGEANGRP------FAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 292 (376)
Q Consensus 229 i~~~~~~v~~~m~~~------~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~ 292 (376)
.+.++|..+ +.++.+++++.+|+++|.+++++++||+| +|+++|++|.+|+++.+.+
T Consensus 85 ------~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~ 147 (164)
T 2pfi_A 85 ------CLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISN 147 (164)
T ss_dssp ------BHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred ------hhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHh
Confidence 233334443 78999999999999999999999999998 7999999999999986653
No 102
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.54 E-value=2e-14 Score=141.63 Aligned_cols=117 Identities=18% Similarity=0.269 Sum_probs=103.7
Q ss_pred cccccccCCCceEecCCCCHHHHHHHHHhC-----CCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHH
Q 017163 234 PRIGEANGRPFAMLRPTASLGSALALLVQA-----DVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQA 308 (376)
Q Consensus 234 ~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~-----~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~ 308 (376)
.+++++|.++++++++++++.+|++.|.++ +++++||+|++++++|++|.+|++... .+.++.+
T Consensus 155 ~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~~----------~~~~v~d- 223 (473)
T 2zy9_A 155 DEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVAD----------PRTRVAE- 223 (473)
T ss_dssp TBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHSC----------TTSBGGG-
T ss_pred CCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcCC----------CCCcHHH-
Confidence 356777999999999999999999999986 589999999999999999999997620 1345665
Q ss_pred HhcCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHh
Q 017163 309 LQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 374 (376)
Q Consensus 309 l~~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~ 374 (376)
+|.+++.++++++++.+|++.|.+++.+.+|||| ++|+++|+||..|+++.+.
T Consensus 224 ------------im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVD-e~g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 224 ------------IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD-EEGRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp ------------TSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred ------------HhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEc-CCCEEEEEEehHhhHHHHH
Confidence 8878899999999999999999999999999999 5799999999999998874
No 103
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.53 E-value=2.6e-14 Score=122.72 Aligned_cols=134 Identities=10% Similarity=0.130 Sum_probs=99.6
Q ss_pred ceEe--CCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCC----ccccccccccc
Q 017163 154 LVQA--GPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSS----LPILQQPVSSI 227 (376)
Q Consensus 154 ~v~v--~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~----~~~~~~~i~~l 227 (376)
++++ .+++++.+|+++|.+++++++||++++ ++| +++|++|..|+++++.......... ...+.....+.
T Consensus 25 ~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d-~~~---~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (185)
T 2j9l_A 25 LLTVLTQDSMTVEDVETIISETTYSGFPVVVSR-ESQ---RLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPL 100 (185)
T ss_dssp CCCCEESSCEEHHHHHHHHHHCCCSEEEEESCT-TTC---BEEEEEEHHHHHHHHHHHHTSCSCCCTTCEEECSSSCCCC
T ss_pred eEEEecCCCccHHHHHHHHHhcCCCceeEEEEC-CCC---eEEEEEEHHHHHHHHHhhcccCCCccccceeecccCCccc
Confidence 7778 999999999999999999999999311 256 8999999999999876532110000 00000000000
Q ss_pred c-ccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 017163 228 Q-LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 292 (376)
Q Consensus 228 ~-i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~ 292 (376)
. .......++++|.+++.++.+++++.+|+++|.+++++++||+| +|+++|+||++|+++.+..
T Consensus 101 ~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~ 165 (185)
T 2j9l_A 101 PPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQ 165 (185)
T ss_dssp CTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred ccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 0 00112357778988999999999999999999999999999998 8999999999999986653
No 104
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.52 E-value=2.9e-15 Score=152.74 Aligned_cols=139 Identities=16% Similarity=0.073 Sum_probs=103.0
Q ss_pred cccccccC--CCceEecCCCCHHHHHHHHH-hCCCCEEEEECCCCcEEEEEeHHHHHHHHhccccc-ccc---------c
Q 017163 234 PRIGEANG--RPFAMLRPTASLGSALALLV-QADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYA-QIH---------L 300 (376)
Q Consensus 234 ~~v~~~m~--~~~~~v~~~~~l~~a~~~m~-~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~-~~~---------~ 300 (376)
.+++++|. +++.++++++++.++.+.|. +++.+++||+|++|+++|++|++|+.+....+... ... .
T Consensus 453 ~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~~ 532 (632)
T 3org_A 453 MTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVLL 532 (632)
T ss_dssp SBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC-----------------
T ss_pred CcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhcccccccccceecc
Confidence 46889999 89999999999999999999 89999999999999999999999998865432100 000 0
Q ss_pred cccc----HHHHHhcC---------------CCCCCCc-ccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeE
Q 017163 301 DEMN----IHQALQLG---------------QDANPSL-GFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRV 360 (376)
Q Consensus 301 ~~~~----v~~~l~~~---------------~~~~~~~-~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~ 360 (376)
.... +....... ..+..+. ++|++++.++++++++.+|++.|.+++++++||+| +|++
T Consensus 533 ~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVve--~G~l 610 (632)
T 3org_A 533 DAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTE--RGKL 610 (632)
T ss_dssp --------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEEE--TTEE
T ss_pred CHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEEE--CCEE
Confidence 0000 00000000 0000012 38999999999999999999999999999999996 3999
Q ss_pred EEEEeHHHHHHHHh
Q 017163 361 EGIISLSDVFRFLL 374 (376)
Q Consensus 361 ~GvIs~~Dil~~l~ 374 (376)
+|+||++|+++++.
T Consensus 611 vGIVT~~Dll~~~~ 624 (632)
T 3org_A 611 VGIVEREDVAYGYS 624 (632)
T ss_dssp EEEEEGGGTEECCC
T ss_pred EEEEehhhHHHHHh
Confidence 99999999987653
No 105
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.50 E-value=1.3e-13 Score=136.69 Aligned_cols=114 Identities=16% Similarity=0.269 Sum_probs=101.2
Q ss_pred cccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECC--CCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCC
Q 017163 238 EANGRPFAMLRPTASLGSALALLVQADVSSIPIVDD--NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDA 315 (376)
Q Consensus 238 ~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~--~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~ 315 (376)
+.|..+++++.+++++.+++++|.+++++++||+|+ +|+++|++|.+|+... . . .+.++.+
T Consensus 117 ~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~---~---~---~~~~V~~-------- 179 (511)
T 3usb_A 117 SGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFI---Q---D---YSIKISD-------- 179 (511)
T ss_dssp SCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTC---C---C---SSSBHHH--------
T ss_pred cccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhh---c---c---CCCcHHH--------
Confidence 446778899999999999999999999999999998 8999999999999641 1 1 1467777
Q ss_pred CCCcccCCC-cceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHh
Q 017163 316 NPSLGFNGQ-RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 374 (376)
Q Consensus 316 ~~~~~im~~-~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~ 374 (376)
+|.+ +++++.+++++.++++.|.+++++.+|||| ++|+++|+||..|+++.+.
T Consensus 180 -----vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVD-e~g~l~GiIT~~Dil~~~~ 233 (511)
T 3usb_A 180 -----VMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVD-NNGVLQGLITIKDIEKVIE 233 (511)
T ss_dssp -----HCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred -----hcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEe-CCCCEeeeccHHHHHHhhh
Confidence 7776 899999999999999999999999999999 5899999999999999874
No 106
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.43 E-value=6.9e-13 Score=131.55 Aligned_cols=115 Identities=19% Similarity=0.288 Sum_probs=101.5
Q ss_pred ccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEEC--CCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCC
Q 017163 237 GEANGRPFAMLRPTASLGSALALLVQADVSSIPIVD--DNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 314 (376)
Q Consensus 237 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd--~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~ 314 (376)
.++|..+++++.+++++.++++.|.+++++++||+| ++++++|++|.+|++... . .+.++.+
T Consensus 93 ~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~------~---~~~~v~~------- 156 (491)
T 1zfj_A 93 ENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS------D---YNAPISE------- 156 (491)
T ss_dssp TTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS------C---SSSBTTT-------
T ss_pred HhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc------c---CCCcHHH-------
Confidence 455888899999999999999999999999999999 789999999999997531 0 1244554
Q ss_pred CCCCcccCCC-cceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHh
Q 017163 315 ANPSLGFNGQ-RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 374 (376)
Q Consensus 315 ~~~~~~im~~-~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~ 374 (376)
+|.+ ++.++.+++++.++++.|.+++++++|||| ++|+++|+||..||++.+.
T Consensus 157 ------im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd-~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 157 ------HMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVD-NSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp ------SCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred ------HcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEc-CCCcEEEEEEHHHHHHHHh
Confidence 7877 899999999999999999999999999999 5799999999999999875
No 107
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.41 E-value=3.1e-12 Score=126.75 Aligned_cols=156 Identities=12% Similarity=0.152 Sum_probs=117.5
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccccc
Q 017163 149 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 228 (376)
Q Consensus 149 ~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 228 (376)
.|..+++++.+++++.+|+++|.+++++++||+|+. .++ +++|++|.+|+.. . .....
T Consensus 118 ~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g-~~~---~lvGiVt~rDl~~------~------~~~~~------ 175 (511)
T 3usb_A 118 GVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNL-DER---KLVGIITNRDMRF------I------QDYSI------ 175 (511)
T ss_dssp CSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCT-TTC---BEEEEEEHHHHTT------C------CCSSS------
T ss_pred ccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecC-CCC---EEEEEEEehHhhh------h------ccCCC------
Confidence 567788999999999999999999999999999641 135 8999999999854 0 00122
Q ss_pred ccccccccccccCC-CceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHH
Q 017163 229 LGTWVPRIGEANGR-PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQ 307 (376)
Q Consensus 229 i~~~~~~v~~~m~~-~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~ 307 (376)
.+.++|++ +++++++++++.+++++|.+++++.+||||++|+++|++|..|+++....... ..+
T Consensus 176 ------~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~a---------~~D 240 (511)
T 3usb_A 176 ------KISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNS---------AKD 240 (511)
T ss_dssp ------BHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTC---------CBC
T ss_pred ------cHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcccc---------hhh
Confidence 34555887 89999999999999999999999999999999999999999999987643110 000
Q ss_pred HHhcCCCCCCCcccCCCc--ceEecCCCCHHHHHHHHhcCCCcEEEEEe
Q 017163 308 ALQLGQDANPSLGFNGQR--CQMCLRSDPLHKVMERLANPGVRRLVIVE 354 (376)
Q Consensus 308 ~l~~~~~~~~~~~im~~~--~~~~~~~~tl~~a~~~m~~~~~~~l~VVd 354 (376)
.+.+. ...+.......+.++.|.+.++..++|-.
T Consensus 241 -------------~~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~ 276 (511)
T 3usb_A 241 -------------KQGRLLVGAAVGVTADAMTRIDALVKASVDAIVLDT 276 (511)
T ss_dssp -------------TTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEEC
T ss_pred -------------hccceeeeeeeeeccchHHHHHHHHhhccceEEecc
Confidence 11111 22334344455667778888888776654
No 108
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.41 E-value=4e-13 Score=134.30 Aligned_cols=122 Identities=13% Similarity=0.133 Sum_probs=101.9
Q ss_pred CCCCCCCCceEeCCC-CCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccc
Q 017163 146 NGRPCPRPLVQAGPY-DSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPV 224 (376)
Q Consensus 146 ~~~~~~~~~v~v~~~-~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i 224 (376)
++++|.++++++.++ +++.+|+++|.+++++++||+|. +++ +++|+||.+|+++.+...... ...
T Consensus 386 V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~--~~g---~lvGiVt~~Dll~~l~~~~~~-------~~~-- 451 (527)
T 3pc3_A 386 IAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQ--DDG---SVLGVVGQETLITQIVSMNRQ-------QSD-- 451 (527)
T ss_dssp GGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECT--TTC---CEEEEEEHHHHHHHHHHHCCC-------TTS--
T ss_pred HHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEEC--CCC---EEEEEEEHHHHHHHHHhccCc-------CCC--
Confidence 456889999999999 99999999999999999999971 156 899999999999887643211 122
Q ss_pred ccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCC----CcEEEEEeHHHHHHHHhcc
Q 017163 225 SSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDN----DSLLDIYSRSDITALAKDK 293 (376)
Q Consensus 225 ~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~----g~lvGiis~~Di~~~~~~~ 293 (376)
.+.++|.++++++.+++++.+++++|.++++ +||||++ |+++|+||++||++.+.+.
T Consensus 452 ----------~V~~im~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~ 512 (527)
T 3pc3_A 452 ----------PAIKALNKRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAG 512 (527)
T ss_dssp ----------BGGGGEETTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTC
T ss_pred ----------cHHHHhcCCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhc
Confidence 3555688899999999999999999987765 7999984 9999999999999977643
No 109
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.41 E-value=7.9e-14 Score=137.67 Aligned_cols=114 Identities=15% Similarity=0.269 Sum_probs=86.4
Q ss_pred ccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCC
Q 017163 237 GEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDAN 316 (376)
Q Consensus 237 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~ 316 (376)
++.|..+++++.+++++.+++++|.+++++++||+|++++++|++|.+|+... . . .+.++.+
T Consensus 92 ~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~---~---~---~~~~v~d--------- 153 (496)
T 4fxs_A 92 EAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV---T---D---LTKSVAA--------- 153 (496)
T ss_dssp CC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC---C---C---TTSBGGG---------
T ss_pred ccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc---c---c---CCCcHHH---------
Confidence 34477789999999999999999999999999999999999999999999621 0 0 1345555
Q ss_pred CCcccCC-C-cceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHH
Q 017163 317 PSLGFNG-Q-RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFL 373 (376)
Q Consensus 317 ~~~~im~-~-~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l 373 (376)
+|. . +++++.+++++.++++.|.+++++.+|||| ++|+++|+||..||++..
T Consensus 154 ----iM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVD-e~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 154 ----VMTPKERLATVKEGATGAEVQEKMHKARVEKILVVN-DEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp ----TSEEGGGCCEEECC----CGGGTCC---CCCEEEEC-TTSBCCEEECCC-----C
T ss_pred ----HhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEc-CCCCEEEeehHhHHHHhh
Confidence 776 3 589999999999999999999999999999 589999999999999864
No 110
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.39 E-value=3.3e-14 Score=141.02 Aligned_cols=113 Identities=14% Similarity=0.167 Sum_probs=0.0
Q ss_pred cCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCC---CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCC
Q 017163 240 NGRPFAMLRPTASLGSALALLVQADVSSIPIVDDN---DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDAN 316 (376)
Q Consensus 240 m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~---g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~ 316 (376)
|.++++++.+++++.+|+++|.+++++++||+|++ |+++|++|.+|++.. . . . .+.++.+
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~-~-~---~---~~~~V~d--------- 165 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID-L-T---Q---TETKVSD--------- 165 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh-h-c---c---ccCcHHH---------
Confidence 66789999999999999999999999999999987 899999999999863 1 0 1 1345555
Q ss_pred CCcccCCCc--ceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHh
Q 017163 317 PSLGFNGQR--CQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 374 (376)
Q Consensus 317 ~~~~im~~~--~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~ 374 (376)
+|.++ +.++.+++++.+|++.|.+++++++|||| ++|+++|+||..||++.+.
T Consensus 166 ----iM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVD-e~g~lvGiIT~~Dil~~~~ 220 (503)
T 1me8_A 166 ----MMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIID-DDQHLRYIVFRKDYDRSQV 220 (503)
T ss_dssp ------------------------------------------------------------
T ss_pred ----HhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEc-CCCeEEEEEEecHHHHhhh
Confidence 77766 99999999999999999999999999999 5799999999999999874
No 111
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.38 E-value=4.3e-14 Score=140.27 Aligned_cols=116 Identities=16% Similarity=0.285 Sum_probs=5.2
Q ss_pred cccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCC
Q 017163 236 IGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDA 315 (376)
Q Consensus 236 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~ 315 (376)
+.++|.++++++.+++++.+|+++|.+++++++||+|++++++|+||.+|+.... . .+.++.+
T Consensus 97 ~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~------~---~~~~v~~-------- 159 (494)
T 1vrd_A 97 TENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEK------N---LSKKIKD-------- 159 (494)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred HhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhc------C---CCCcHHH--------
Confidence 3455888899999999999999999999999999999889999999999998621 0 1245555
Q ss_pred CCCcccCCC--cceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHh
Q 017163 316 NPSLGFNGQ--RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 374 (376)
Q Consensus 316 ~~~~~im~~--~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~ 374 (376)
+|.+ ++.++.+++++.++++.|.+++++++|||| ++|+++|+||..|+++.+.
T Consensus 160 -----im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd-~~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 160 -----LMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVS-KDNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp -------------------------------------------------------CHHHHT
T ss_pred -----HhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEc-CCCeEEEEEEHHHHHhhhc
Confidence 7776 899999999999999999999999999999 5799999999999999874
No 112
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.35 E-value=7.3e-14 Score=137.82 Aligned_cols=114 Identities=14% Similarity=0.264 Sum_probs=1.3
Q ss_pred cccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCC
Q 017163 236 IGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDA 315 (376)
Q Consensus 236 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~ 315 (376)
+++.|..+++++.+++++.+|+++|.+++++.+||+| +|+++|++|.+|+..... .+.++.+
T Consensus 90 ~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~~~---------~~~~V~~-------- 151 (490)
T 4avf_A 90 HETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRVKPN---------AGDTVAA-------- 151 (490)
T ss_dssp CCC-----------------------------------------------------------------------------
T ss_pred cccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhhccc---------cCCcHHH--------
Confidence 3445777889999999999999999999999999999 899999999999964210 1345565
Q ss_pred CCCcccCC-C-cceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHH
Q 017163 316 NPSLGFNG-Q-RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFL 373 (376)
Q Consensus 316 ~~~~~im~-~-~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l 373 (376)
+|. + ++.++.+++++.+|++.|.+++++.+|||| ++|+++|+||..|+++..
T Consensus 152 -----vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVD-e~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 152 -----IMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVD-ENFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp ------------------------------------------------------------
T ss_pred -----HhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEc-CCCcEEEEEehHHhhhhc
Confidence 676 3 699999999999999999999999999999 589999999999999874
No 113
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.32 E-value=1.6e-13 Score=135.99 Aligned_cols=166 Identities=14% Similarity=0.113 Sum_probs=22.6
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCccccccccccccc
Q 017163 150 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 229 (376)
Q Consensus 150 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~i 229 (376)
|..+++++.+++++.+|+++|.+++++++||+|++...+ +++|++|.+|++.. . ....
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g---~lvGiVt~~Dl~~~--~---------~~~~-------- 160 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHG---VLLGLVTQRDYPID--L---------TQTE-------- 160 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCC---eEEEEEEHHHHHhh--h---------cccc--------
Confidence 677899999999999999999999999999997511116 89999999999752 0 0011
Q ss_pred cccccccccccCCC--ceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHH
Q 017163 230 GTWVPRIGEANGRP--FAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQ 307 (376)
Q Consensus 230 ~~~~~~v~~~m~~~--~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~ 307 (376)
..+.++|.++ ++++++++++.+|+++|.+++++.+||+|++|+++|+||.+|+++........ .....
T Consensus 161 ----~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~~~~-----~d~~~- 230 (503)
T 1me8_A 161 ----TKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHNEL-----VDSQK- 230 (503)
T ss_dssp -----------------------------------------------------------------CCCC-----BCTTS-
T ss_pred ----CcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcccch-----hcccc-
Confidence 2345568877 99999999999999999999999999999999999999999999865422110 00000
Q ss_pred HHhcCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEE
Q 017163 308 ALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGI 363 (376)
Q Consensus 308 ~l~~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~Gv 363 (376)
. ++. ...+.. ....+.++.|.+.+++.+.| |..+|...|+
T Consensus 231 ----------~--l~v--~a~v~~-~~~~e~~~~l~e~gv~~l~V-d~~~g~~~~~ 270 (503)
T 1me8_A 231 ----------R--YLV--GAGINT-RDFRERVPALVEAGADVLCI-DSSDGFSEWQ 270 (503)
T ss_dssp ----------C--BCC--EEEECS-SSHHHHHHHHHHHTCSEEEE-CCSCCCSHHH
T ss_pred ----------c--ccc--ccccCc-hhHHHHHHHHHhhhccceEE-ecccCcccch
Confidence 0 111 123344 66667788888889986554 3223544443
No 114
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.31 E-value=1.3e-12 Score=133.13 Aligned_cols=136 Identities=12% Similarity=0.060 Sum_probs=99.9
Q ss_pred CCCCC--CCceEeCCCCCHHHHHHHHH-hCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCc------
Q 017163 147 GRPCP--RPLVQAGPYDSLKEVALKIL-QNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSL------ 217 (376)
Q Consensus 147 ~~~~~--~~~v~v~~~~sl~~a~~~m~-~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~------ 217 (376)
+++|. ++++++++++++.++.+.|. +++++++||+|+ ++ +++|++|.+|+++.+...........
T Consensus 456 ~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~---~~---~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~ 529 (632)
T 3org_A 456 REIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDA---NG---YLLGAISRKEIVDRLQHVLEDVPEPIAGHRTL 529 (632)
T ss_dssp HHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCT---TC---BBCCEESHHHHTTTTTTC--------------
T ss_pred HHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEec---CC---eEEEEEEHHHHHHHHHHHhhhcccccccccce
Confidence 55787 88999999999999999999 899999999975 56 89999999999987654321111000
Q ss_pred -----ccccccccccc-----------------ccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCC
Q 017163 218 -----PILQQPVSSIQ-----------------LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDND 275 (376)
Q Consensus 218 -----~~~~~~i~~l~-----------------i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g 275 (376)
..+.+.++.+. .-...+++.++|+++++++++++++.+|+++|.+++++++||+ ++|
T Consensus 530 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G 608 (632)
T 3org_A 530 VLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERG 608 (632)
T ss_dssp -----------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETT
T ss_pred eccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECC
Confidence 00000111110 0011124788999999999999999999999999999999999 789
Q ss_pred cEEEEEeHHHHHHH
Q 017163 276 SLLDIYSRSDITAL 289 (376)
Q Consensus 276 ~lvGiis~~Di~~~ 289 (376)
+++|+||++|+++.
T Consensus 609 ~lvGIVT~~Dll~~ 622 (632)
T 3org_A 609 KLVGIVEREDVAYG 622 (632)
T ss_dssp EEEEEEEGGGTEEC
T ss_pred EEEEEEehhhHHHH
Confidence 99999999999763
No 115
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.30 E-value=2.4e-13 Score=131.67 Aligned_cols=109 Identities=19% Similarity=0.242 Sum_probs=0.0
Q ss_pred cCCCceEecCCCCHHHHHHHHHhCCCCEEEEECC---CCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCC
Q 017163 240 NGRPFAMLRPTASLGSALALLVQADVSSIPIVDD---NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDAN 316 (376)
Q Consensus 240 m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~---~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~ 316 (376)
|-.+++++.|+.++.+|+++|.+++++.+||+|+ +++|+|++|.+|+... . . +.++.+
T Consensus 144 ~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~---d----~---~~~V~e--------- 204 (556)
T 4af0_A 144 FITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ---D----A---ETPIKS--------- 204 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc---c----c---ceEhhh---------
Confidence 4457889999999999999999999999999986 6799999999998651 1 1 245666
Q ss_pred CCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHH
Q 017163 317 PSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRF 372 (376)
Q Consensus 317 ~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~ 372 (376)
+|+.+++++..+.++.+|.+.|.++++..||||| ++++++|+||..|+++.
T Consensus 205 ----vMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd-~~g~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 205 ----VMTTEVVTGSSPITLEKANSLLRETKKGKLPIVD-SNGHLVSLVARSDLLKN 255 (556)
T ss_dssp --------------------------------------------------------
T ss_pred ----hcccceEEecCCCCHHHHHHHHHHccccceeEEc-cCCcEEEEEEechhhhh
Confidence 8888999999999999999999999999999999 58999999999999875
No 116
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.29 E-value=2.7e-11 Score=120.10 Aligned_cols=115 Identities=15% Similarity=0.192 Sum_probs=99.1
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccccc
Q 017163 149 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 228 (376)
Q Consensus 149 ~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 228 (376)
+|..+++++.+++++.++++.|.+++++++||+|. .+++ +++|++|.+|++... . ..
T Consensus 95 im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-~~~~---~lvGivt~~Dl~~~~-----~-------~~------- 151 (491)
T 1zfj_A 95 GVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVET-LANR---KLVGIITNRDMRFIS-----D-------YN------- 151 (491)
T ss_dssp TTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESC-TTTC---BEEEEEEHHHHHHCS-----C-------SS-------
T ss_pred cCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEe-CCCC---EEEEEEEHHHHhhhc-----c-------CC-------
Confidence 67889999999999999999999999999999961 0146 899999999997620 0 11
Q ss_pred ccccccccccccCC-CceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 229 LGTWVPRIGEANGR-PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 229 i~~~~~~v~~~m~~-~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
..+.++|.+ +++++++++++.+++++|.+++++.+||||++|+++|++|..|+++...
T Consensus 152 -----~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 152 -----APISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp -----SBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred -----CcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHh
Confidence 234556887 8999999999999999999999999999999999999999999999776
No 117
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.27 E-value=9.7e-13 Score=127.43 Aligned_cols=113 Identities=20% Similarity=0.237 Sum_probs=0.0
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCccccccccccccc
Q 017163 150 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 229 (376)
Q Consensus 150 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~i 229 (376)
+-.+++++.|+.++.+|+++|.+++++.+||++....++ +++||+|.+|+. |- . ...
T Consensus 144 ~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~---kLvGIvT~RD~r-f~-----d-------~~~------- 200 (556)
T 4af0_A 144 FITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDS---KLLGIVTGRDVQ-FQ-----D-------AET------- 200 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCC---EEEEEEeccccc-cc-----c-------cce-------
Confidence 556789999999999999999999999999997644456 899999999963 21 0 122
Q ss_pred cccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 017163 230 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 290 (376)
Q Consensus 230 ~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~ 290 (376)
.+.++|+++++++....++.+|.++|.++++..+||||++|+|+|+||+.|+.+..
T Consensus 201 -----~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 201 -----PIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQ 256 (556)
T ss_dssp -------------------------------------------------------------
T ss_pred -----EhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhh
Confidence 34555999999999999999999999999999999999999999999999998744
No 118
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.23 E-value=3.5e-12 Score=125.92 Aligned_cols=112 Identities=15% Similarity=0.169 Sum_probs=83.7
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccccc
Q 017163 149 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 228 (376)
Q Consensus 149 ~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 228 (376)
.|..+++++.+++++.+|+++|.+++++++||+|+ ++ +++|++|.+|+.. . .....
T Consensus 94 ~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~---~~---~lvGiVt~rDL~~------~------~~~~~------ 149 (496)
T 4fxs_A 94 GVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTE---NN---ELVGIITGRDVRF------V------TDLTK------ 149 (496)
T ss_dssp --CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECS---SS---BEEEEEEHHHHTT------C------CCTTS------
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEcc---CC---EEEEEEEHHHHhh------c------ccCCC------
Confidence 57788999999999999999999999999999975 46 8999999999852 0 01122
Q ss_pred ccccccccccccC-C-CceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 017163 229 LGTWVPRIGEANG-R-PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 290 (376)
Q Consensus 229 i~~~~~~v~~~m~-~-~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~ 290 (376)
.+.++|+ + +++++++++++.+++++|.++++..+||||++|+++|+||..|+++..
T Consensus 150 ------~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 150 ------SVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp ------BGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----C
T ss_pred ------cHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhh
Confidence 3445577 3 589999999999999999999999999999999999999999998854
No 119
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.19 E-value=4.9e-12 Score=125.46 Aligned_cols=113 Identities=19% Similarity=0.303 Sum_probs=4.6
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccccc
Q 017163 149 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 228 (376)
Q Consensus 149 ~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 228 (376)
+|.++++++.+++++.+|+++|.+++++.+||+|+ ++ +++|++|..|+++. . . ..
T Consensus 100 iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~---~~---~lvGivt~~Dl~~~--~---~-------~~------- 154 (494)
T 1vrd_A 100 GIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDE---EG---RLVGLLTNRDVRFE--K---N-------LS------- 154 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcC---CC---EEEEEEEHHHHHhh--c---C-------CC-------
Confidence 67788999999999999999999999999999975 46 89999999999751 0 0 11
Q ss_pred ccccccccccccCC--CceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 229 LGTWVPRIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 229 i~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
..+.++|.+ +++++.+++++.+++++|.++++..+||||++|+++|++|..|+++...
T Consensus 155 -----~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 155 -----KKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp -----------------------------------------------------------CHHHHT
T ss_pred -----CcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhc
Confidence 234556887 8999999999999999999999999999999999999999999998764
No 120
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.19 E-value=1.6e-13 Score=136.71 Aligned_cols=117 Identities=20% Similarity=0.233 Sum_probs=68.0
Q ss_pred cccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECC---CCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcC
Q 017163 236 IGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDD---NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLG 312 (376)
Q Consensus 236 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~---~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~ 312 (376)
+.++|.++++++.+++++.+|+++|.+++++++||+|+ +++++|++|.+|+...... ..+.++.+
T Consensus 110 ~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~-------~~~~~v~~----- 177 (514)
T 1jcn_A 110 FEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEK-------DHTTLLSE----- 177 (514)
T ss_dssp CCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC-------------------------
T ss_pred hhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhc-------cCCCCHHH-----
Confidence 44557778899999999999999999999999999997 5899999999998763210 01245555
Q ss_pred CCCCCCcccCCC--cceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHH
Q 017163 313 QDANPSLGFNGQ--RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFL 373 (376)
Q Consensus 313 ~~~~~~~~im~~--~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l 373 (376)
+|.+ ++.++.+++++.+|++.|.+++++++|||| ++|+++|+||.+|+++++
T Consensus 178 --------vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd-~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 178 --------VMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVN-DCDELVAIIARTDLKKNR 231 (514)
T ss_dssp -----------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEES-SSSCCC----CCCCSSCC
T ss_pred --------HhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEEC-CCCeEEEEEEHHHHHHHh
Confidence 6776 899999999999999999999999999999 579999999999988754
No 121
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.18 E-value=2.4e-12 Score=127.31 Aligned_cols=109 Identities=17% Similarity=0.316 Sum_probs=0.0
Q ss_pred ccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCC
Q 017163 239 ANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPS 318 (376)
Q Consensus 239 ~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~ 318 (376)
.|..+++++.+++++.+++++|.+++++.+||+|+ ++++|+++.+|++. . . +.++.+
T Consensus 98 ~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~---~-----~---~~~v~~----------- 154 (486)
T 2cu0_A 98 LIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA---R-----E---GKLVKE----------- 154 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc---C-----C---CCCHHH-----------
Confidence 46678899999999999999999999999999987 99999999999875 1 1 245555
Q ss_pred cccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHH
Q 017163 319 LGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFL 373 (376)
Q Consensus 319 ~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l 373 (376)
+|.+++.++.+++++.++++.|.+++++.+|||| +.|+++|+||..||++.+
T Consensus 155 --im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd-e~g~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 155 --LMTKEVITVPESIEVEEALKIMIENRIDRLPVVD-ERGKLVGLITMSDLVARK 206 (486)
T ss_dssp -------------------------------------------------------
T ss_pred --HccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEe-cCCeEEEEEEHHHHHHhh
Confidence 6777889999999999999999999999999999 579999999999999875
No 122
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.17 E-value=7.7e-12 Score=123.37 Aligned_cols=112 Identities=17% Similarity=0.206 Sum_probs=0.0
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccccc
Q 017163 149 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 228 (376)
Q Consensus 149 ~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 228 (376)
.|..+++++.+++++.+|+++|.+++++++||+| ++ +++|++|.+|+... .....
T Consensus 93 ~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd----~g---~lvGIVt~rDl~~~------------~~~~~------ 147 (490)
T 4avf_A 93 AIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE----QG---ELVGIVTGRDLRVK------------PNAGD------ 147 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE----CC---EEEEEEEhHHhhhc------------cccCC------
Confidence 5778899999999999999999999999999996 35 89999999998531 00122
Q ss_pred ccccccccccccC-C-CceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 017163 229 LGTWVPRIGEANG-R-PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 291 (376)
Q Consensus 229 i~~~~~~v~~~m~-~-~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~ 291 (376)
.+.++|+ + +++++++++++.+|+++|.++++..+||||++|+++|+||+.|+++...
T Consensus 148 ------~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 148 ------TVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp -----------------------------------------------------------------
T ss_pred ------cHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 3455587 4 6999999999999999999999999999999999999999999998653
No 123
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.10 E-value=1.4e-10 Score=82.98 Aligned_cols=69 Identities=13% Similarity=0.234 Sum_probs=54.5
Q ss_pred ceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCCcccCC
Q 017163 244 FAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGFNG 323 (376)
Q Consensus 244 ~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~im~ 323 (376)
++++.+++++.+|+++|.+++++++||+| +|+++|++|.+|+++.+...... ..+.++++ +|+
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~~~~~---~~~~~V~~-------------iMt 64 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVAKGKN---PKEVKVEE-------------IMT 64 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTTTTCC---GGGCBGGG-------------TCE
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHhcCCC---cccCCHHH-------------hcC
Confidence 57999999999999999999999999997 68999999999998644322221 12456666 887
Q ss_pred CcceEe
Q 017163 324 QRCQMC 329 (376)
Q Consensus 324 ~~~~~~ 329 (376)
++++|+
T Consensus 65 ~~~iTV 70 (70)
T 3ghd_A 65 KNPVKI 70 (70)
T ss_dssp ECTTCC
T ss_pred CCCeEC
Confidence 777653
No 124
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.01 E-value=5.3e-11 Score=117.63 Aligned_cols=160 Identities=16% Similarity=0.258 Sum_probs=22.1
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCcccccccccccc
Q 017163 149 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 228 (376)
Q Consensus 149 ~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 228 (376)
.|..+++++.+++++.+++++|.+++++++||++. + +++|+++.+|++. . ...
T Consensus 98 ~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~----~---~lvGivt~~Dl~~---~-----------~~~------ 150 (486)
T 2cu0_A 98 LIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED----E---KVVGIITKKDIAA---R-----------EGK------ 150 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC----C---EEEEEEEHHHhcc---C-----------CCC------
Confidence 56788999999999999999999999999999963 4 7999999999864 0 112
Q ss_pred ccccccccccccCCCceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccccccccHHHH
Q 017163 229 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQA 308 (376)
Q Consensus 229 i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~ 308 (376)
.+.++|.++++++.+++++.+++++|.+++++.+||||++|+++|++|.+|+++...... ...+
T Consensus 151 ------~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~~~~---------~~~~- 214 (486)
T 2cu0_A 151 ------LVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKKYKN---------AVRD- 214 (486)
T ss_dssp --------------------------------------------------------------CCTT---------CCBC-
T ss_pred ------CHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhhccc---------cccc-
Confidence 344558878999999999999999999999999999999999999999999998653110 0000
Q ss_pred HhcCCCCCCCcccCCCcceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEE
Q 017163 309 LQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGII 364 (376)
Q Consensus 309 l~~~~~~~~~~~im~~~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvI 364 (376)
.... ++-. ..+..++ .+.+..|...++..+ |+|...|...+++
T Consensus 215 ------~~g~--~~v~--~~~~~~~--~~~a~~l~~~gvd~l-vvdta~G~~~~~L 257 (486)
T 2cu0_A 215 ------ENGE--LLVA--AAVSPFD--IKRAIELDKAGVDVI-VVDTAHAHNLKAI 257 (486)
T ss_dssp ------TTSC--BCCE--EEECTTC--HHHHHHHHHTTCSEE-EEECSCCCCHHHH
T ss_pred ------cCCc--eeec--ceechhh--HHHHHHHHHhcCCce-EEEecCCcEeehh
Confidence 0001 1100 1223333 566778899999876 5662345544444
No 125
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.99 E-value=1.6e-11 Score=122.28 Aligned_cols=118 Identities=17% Similarity=0.207 Sum_probs=67.1
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHHhCCCceeEEEecCCCCCCcceEEEeeehhhHHHHHhhhccCCCCCccccccccccc
Q 017163 148 RPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 227 (376)
Q Consensus 148 ~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~~~~~g~~~~l~giit~~dil~~l~~~~~~~~~~~~~~~~~i~~l 227 (376)
.+|.++++++.+++++.+|+++|.+++++.+||+|++..++ +++|++|.+|+..... ....
T Consensus 112 ~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~---~lvGiVt~~Dl~~~~~----------~~~~------ 172 (514)
T 1jcn_A 112 QGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGS---KLVGIVTSRDIDFLAE----------KDHT------ 172 (514)
T ss_dssp TTSCSSCCCCCC-----------------CEESCC-----------CCEECTTTTC------------------------
T ss_pred hccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCC---EEEEEEEHHHHHhhhh----------ccCC------
Confidence 36777889999999999999999999999999996411136 8999999999865210 0011
Q ss_pred cccccccccccccCC--CceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 017163 228 QLGTWVPRIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 290 (376)
Q Consensus 228 ~i~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~ 290 (376)
..+.++|.+ +++++.+++++.+|+++|.++++..+||||++|+++|++|++|+++..
T Consensus 173 ------~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 173 ------TLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNR 231 (514)
T ss_dssp --------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCC
T ss_pred ------CCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHh
Confidence 234556887 899999999999999999999999999999999999999999987644
No 126
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.81 E-value=7.2e-09 Score=73.68 Aligned_cols=49 Identities=14% Similarity=0.301 Sum_probs=44.6
Q ss_pred CceEecCCCCHHHHHHHHHhCCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 017163 243 PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 292 (376)
Q Consensus 243 ~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiis~~Di~~~~~~ 292 (376)
+++++.+++++.+|+++|.+++++++||+|+ |+++|++|.+|+++.+..
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~ 49 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVA 49 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 3578999999999999999999999999997 999999999999986643
No 127
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.80 E-value=1.3e-08 Score=72.60 Aligned_cols=47 Identities=15% Similarity=0.318 Sum_probs=43.9
Q ss_pred ceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHh
Q 017163 326 CQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 374 (376)
Q Consensus 326 ~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~ 374 (376)
++++.+++++.+|++.|.+++++++||+|+ |+++|+||.+|+++.++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~--~~lvGIvT~~Di~~~~~ 48 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVV 48 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 679999999999999999999999999994 89999999999998764
No 128
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.63 E-value=8.8e-08 Score=67.92 Aligned_cols=48 Identities=17% Similarity=0.372 Sum_probs=44.7
Q ss_pred cceEecCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHHHHh
Q 017163 325 RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 374 (376)
Q Consensus 325 ~~~~~~~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~~l~ 374 (376)
++.++.+++++.+|++.|.+++++++||+| + |+++|+||.+|+++++.
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d-~-~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVME-G-DEILGVVTERDILDKVV 48 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEE-T-TEEEEEEEHHHHHHHTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHH
Confidence 367899999999999999999999999999 4 99999999999999864
No 129
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=60.34 E-value=17 Score=25.58 Aligned_cols=32 Identities=19% Similarity=0.365 Sum_probs=26.0
Q ss_pred CCEEEEECCCCcEEEEEeHHHHHHHHhccccc
Q 017163 265 VSSIPIVDDNDSLLDIYSRSDITALAKDKAYA 296 (376)
Q Consensus 265 i~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~ 296 (376)
...+=++|++|..+|+++..+.+.++.+....
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A~e~~LD 44 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIAARRNLD 44 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHHHHTTCE
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHHHHcCCC
Confidence 34577899999999999999999988765443
No 130
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=43.38 E-value=36 Score=23.88 Aligned_cols=25 Identities=16% Similarity=0.306 Sum_probs=20.8
Q ss_pred CcEEEEEeCCCCeEEEEEeHHHHHHH
Q 017163 347 VRRLVIVEAGSKRVEGIISLSDVFRF 372 (376)
Q Consensus 347 ~~~l~VVd~~~~~~~GvIs~~Dil~~ 372 (376)
.+.+-+|| ++|..+|+++..+-++.
T Consensus 13 ~~eVrli~-~~Ge~lGv~~~~eAl~~ 37 (78)
T 1tif_A 13 AREVRLID-QNGDQLGIKSKQEALEI 37 (78)
T ss_dssp CSEEEEEC-TTSCEEEEEEHHHHHHH
T ss_pred CCEEEEEC-CCCcCCCcccHHHHHHH
Confidence 35677899 57999999999998875
No 131
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=36.85 E-value=13 Score=29.96 Aligned_cols=35 Identities=34% Similarity=0.673 Sum_probs=29.1
Q ss_pred HHHHHHHHhcCCCcEEEEEeCCCCeEEEEEeHHHHHH
Q 017163 335 LHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFR 371 (376)
Q Consensus 335 l~~a~~~m~~~~~~~l~VVd~~~~~~~GvIs~~Dil~ 371 (376)
+.+.++.+...+-.-++|-.+ ++++|+|.+.|.+|
T Consensus 121 ~~~~~~~la~~G~T~v~VA~d--~~l~GvIalaD~iK 155 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVEG--SRVLGVIALKDIVK 155 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEET--TEEEEEEEEEECCC
T ss_pred HHHHHHHHHhCCCCEEEEEEC--CEEEEEEEEecCCC
Confidence 677788899999888888874 99999999988653
No 132
>2hje_A Autoinducer 2 sensor kinase/phosphatase LUXQ; PER/ARNT/simple-minded (PAS) fold, autoinducer-2 (AI-2), quorum sensing, histidine sensor kinase; 1.70A {Vibrio harveyi} SCOP: d.110.6.3 PDB: 2hj9_C 1zhh_B*
Probab=27.13 E-value=37 Score=28.82 Aligned_cols=18 Identities=33% Similarity=0.542 Sum_probs=15.7
Q ss_pred CcEEEEEeCCCCeEEEEE
Q 017163 347 VRRLVIVEAGSKRVEGII 364 (376)
Q Consensus 347 ~~~l~VVd~~~~~~~GvI 364 (376)
+||.||+|..+|+++|.+
T Consensus 119 vRR~pIi~~~tGeVlG~L 136 (221)
T 2hje_A 119 VRRVPILDPSTGEVLGFS 136 (221)
T ss_dssp EEEEEEEETTTTEEEEEE
T ss_pred EEccceecCCCCcEEEEE
Confidence 479999999899999975
No 133
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=25.69 E-value=49 Score=25.14 Aligned_cols=17 Identities=29% Similarity=0.419 Sum_probs=14.3
Q ss_pred EEEEECCCCcEEEEEeH
Q 017163 267 SIPIVDDNDSLLDIYSR 283 (376)
Q Consensus 267 ~lpVvd~~g~lvGiis~ 283 (376)
..||.|++|+++|+++.
T Consensus 105 ~~PV~~~~g~viGvv~v 121 (131)
T 1p0z_A 105 KSPIQDATGKVIGIVSV 121 (131)
T ss_dssp EEEEECTTCCEEEEEEE
T ss_pred EEeEECCCCCEEEEEEE
Confidence 36999888999999874
No 134
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=24.76 E-value=50 Score=25.54 Aligned_cols=18 Identities=22% Similarity=0.394 Sum_probs=14.8
Q ss_pred EEEEECCCCcEEEEEeHH
Q 017163 267 SIPIVDDNDSLLDIYSRS 284 (376)
Q Consensus 267 ~lpVvd~~g~lvGiis~~ 284 (376)
..||.|++|+++|+++..
T Consensus 110 ~~PV~~~~g~viGvv~vg 127 (142)
T 3by8_A 110 FTPIYDENHKQIGVVAIG 127 (142)
T ss_dssp EEEEECTTSCEEEEEEEE
T ss_pred EEeEEcCCCCEEEEEEEe
Confidence 469998789999998754
No 135
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=22.90 E-value=85 Score=23.53 Aligned_cols=55 Identities=20% Similarity=0.231 Sum_probs=37.3
Q ss_pred ccEEEEcCCCCHHHHHHHHHHcCCCeee---cccCCCC-----ceeEEeeHHHHHHHHHHhcc
Q 017163 58 GKVTALDVNLAVKQAFHVLYEQGLPMVP---LWDDFKG-----RFVGVLSALDFILILRELGT 112 (376)
Q Consensus 58 ~~vi~l~~~~~v~~A~~~l~~~~i~~~P---V~d~~~~-----~~vG~lt~~D~i~il~~~~~ 112 (376)
-.++.++.+..-.+.-....+.++.+.| ++|.++. ++.|..+..+|...+.+...
T Consensus 66 ~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~~ 128 (134)
T 2fwh_A 66 TVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP 128 (134)
T ss_dssp SEEEEEECTTCCHHHHHHHHHTTCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC--
T ss_pred cEEEEEeCCCCcchHHHHHHHcCCCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcCc
Confidence 4566677765445566667778888887 5655432 46799999999988876644
No 136
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=21.10 E-value=1.2e+02 Score=19.63 Aligned_cols=30 Identities=10% Similarity=0.069 Sum_probs=25.1
Q ss_pred CCCCHHHHHHHHhcCCCcEEEEEeCCCCeE
Q 017163 331 RSDPLHKVMERLANPGVRRLVIVEAGSKRV 360 (376)
Q Consensus 331 ~~~tl~~a~~~m~~~~~~~l~VVd~~~~~~ 360 (376)
+-.|+.+|+.+|-..+...+...|.++|++
T Consensus 11 kpmsveEAv~qmel~gh~F~vF~n~~t~~~ 40 (57)
T 3k2t_A 11 KPMDSEEAVLQMNLLGHSFYVYTDAETNGT 40 (57)
T ss_dssp CCBCHHHHHHHHHHHTCSEEEEEBSSSCCE
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEcCCCCCE
Confidence 557899999999999999888888766664
Done!