Query 017167
Match_columns 376
No_of_seqs 150 out of 1853
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 06:11:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017167.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017167hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 1.2E-35 2.6E-40 286.4 26.9 312 18-345 10-331 (358)
2 PRK11272 putative DMT superfam 100.0 2.2E-31 4.7E-36 251.8 23.4 279 22-345 9-288 (292)
3 PRK11453 O-acetylserine/cystei 100.0 9.5E-31 2.1E-35 248.2 22.5 276 23-342 6-287 (299)
4 PRK11689 aromatic amino acid e 100.0 3.2E-30 6.8E-35 244.2 20.4 281 20-342 3-287 (295)
5 TIGR00950 2A78 Carboxylate/Ami 100.0 9E-30 2E-34 236.4 21.3 259 33-338 1-260 (260)
6 PRK10532 threonine and homoser 100.0 2.1E-29 4.6E-34 238.3 22.5 274 18-343 9-282 (293)
7 PRK15430 putative chlorampheni 100.0 9.8E-30 2.1E-34 240.9 18.5 277 15-340 2-283 (296)
8 TIGR00817 tpt Tpt phosphate/ph 100.0 2E-27 4.3E-32 225.8 21.6 281 24-344 5-295 (302)
9 TIGR03340 phn_DUF6 phosphonate 100.0 1.9E-26 4.2E-31 216.8 24.1 275 23-339 3-280 (281)
10 PTZ00343 triose or hexose phos 99.9 5.7E-25 1.2E-29 212.7 23.4 284 19-343 47-349 (350)
11 TIGR00688 rarD rarD protein. T 99.9 1.8E-24 3.9E-29 200.8 21.3 248 21-317 2-255 (256)
12 COG0697 RhaT Permeases of the 99.9 6.5E-23 1.4E-27 192.4 23.2 281 19-343 5-288 (292)
13 PF06027 DUF914: Eukaryotic pr 99.9 1.9E-22 4.1E-27 191.2 24.7 296 19-346 11-309 (334)
14 COG5006 rhtA Threonine/homoser 99.9 3.5E-21 7.7E-26 170.1 20.6 274 22-346 13-289 (292)
15 KOG4510 Permease of the drug/m 99.9 2.7E-23 5.9E-28 184.5 4.6 290 19-344 36-327 (346)
16 COG2962 RarD Predicted permeas 99.9 4.9E-20 1.1E-24 167.1 21.2 276 18-341 4-282 (293)
17 TIGR00776 RhaT RhaT L-rhamnose 99.9 2.9E-20 6.4E-25 175.4 19.7 272 22-341 2-287 (290)
18 KOG2765 Predicted membrane pro 99.8 7.4E-18 1.6E-22 156.9 12.9 233 86-348 160-396 (416)
19 PF08449 UAA: UAA transporter 99.8 1.1E-16 2.5E-21 152.1 21.1 276 38-345 17-300 (303)
20 KOG1441 Glucose-6-phosphate/ph 99.6 5.1E-16 1.1E-20 145.7 9.9 286 24-349 20-314 (316)
21 COG2510 Predicted membrane pro 99.6 1E-14 2.2E-19 116.3 10.9 134 22-163 4-138 (140)
22 COG2510 Predicted membrane pro 99.6 7.1E-14 1.5E-18 111.5 12.8 137 204-343 4-140 (140)
23 PF04142 Nuc_sug_transp: Nucle 99.5 6.5E-13 1.4E-17 121.9 16.1 231 81-333 13-244 (244)
24 KOG1580 UDP-galactose transpor 99.5 6.3E-13 1.4E-17 116.7 13.9 255 51-340 54-311 (337)
25 PF00892 EamA: EamA-like trans 99.4 1.2E-13 2.6E-18 113.0 6.2 125 31-163 1-125 (126)
26 KOG2766 Predicted membrane pro 99.4 2.5E-14 5.5E-19 126.9 2.2 300 16-356 13-313 (336)
27 KOG2234 Predicted UDP-galactos 99.4 5.9E-11 1.3E-15 111.2 24.1 298 21-346 15-326 (345)
28 PF00892 EamA: EamA-like trans 99.4 6.9E-13 1.5E-17 108.4 5.5 124 213-340 1-124 (126)
29 KOG1581 UDP-galactose transpor 99.3 3E-11 6.6E-16 110.3 14.0 259 49-340 50-311 (327)
30 KOG1444 Nucleotide-sugar trans 99.3 1.9E-09 4.1E-14 99.8 21.9 279 23-341 14-299 (314)
31 TIGR00950 2A78 Carboxylate/Ami 99.2 1.1E-10 2.3E-15 108.2 12.4 134 18-160 125-260 (260)
32 KOG1443 Predicted integral mem 99.1 1.3E-08 2.8E-13 93.3 21.0 252 50-340 45-313 (349)
33 PF06800 Sugar_transport: Suga 99.1 6.9E-09 1.5E-13 95.3 18.8 221 82-339 42-268 (269)
34 TIGR03340 phn_DUF6 phosphonate 99.0 2.7E-09 5.8E-14 100.4 13.0 133 205-342 3-135 (281)
35 PRK10532 threonine and homoser 99.0 3.2E-09 6.8E-14 100.6 13.3 137 19-165 146-282 (293)
36 PF13536 EmrE: Multidrug resis 99.0 4.1E-10 8.8E-15 91.2 5.1 103 55-164 2-106 (113)
37 PRK11272 putative DMT superfam 99.0 4E-09 8.6E-14 99.8 12.2 137 19-163 148-284 (292)
38 PF03151 TPT: Triose-phosphate 99.0 3.3E-09 7.1E-14 90.3 9.9 137 204-341 1-152 (153)
39 PRK15430 putative chlorampheni 99.0 2.9E-09 6.4E-14 100.9 10.5 139 199-341 4-144 (296)
40 KOG4314 Predicted carbohydrate 99.0 6.5E-10 1.4E-14 95.5 4.6 217 97-350 64-284 (290)
41 PLN00411 nodulin MtN21 family 98.9 1.3E-08 2.8E-13 98.8 13.8 136 20-164 188-328 (358)
42 TIGR00688 rarD rarD protein. T 98.9 4.8E-09 1E-13 97.2 10.5 136 203-341 2-141 (256)
43 PRK11689 aromatic amino acid e 98.9 1.8E-08 3.9E-13 95.5 11.5 133 20-164 155-287 (295)
44 PRK11453 O-acetylserine/cystei 98.8 5.2E-08 1.1E-12 92.5 12.9 137 20-163 142-286 (299)
45 PRK13499 rhamnose-proton sympo 98.8 6.9E-07 1.5E-11 85.4 20.1 299 18-342 4-341 (345)
46 KOG1442 GDP-fucose transporter 98.8 3.6E-08 7.7E-13 89.0 9.8 269 38-342 45-327 (347)
47 PF05653 Mg_trans_NIPA: Magnes 98.8 2E-07 4.4E-12 88.2 15.3 283 18-347 4-297 (300)
48 PRK02971 4-amino-4-deoxy-L-ara 98.8 5.5E-08 1.2E-12 80.3 10.0 123 203-346 2-126 (129)
49 KOG1583 UDP-N-acetylglucosamin 98.7 5.5E-08 1.2E-12 88.0 9.9 258 52-341 35-313 (330)
50 TIGR00817 tpt Tpt phosphate/ph 98.7 5.5E-08 1.2E-12 92.4 9.3 140 19-164 143-293 (302)
51 KOG3912 Predicted integral mem 98.7 5.6E-08 1.2E-12 88.0 8.3 278 35-341 17-333 (372)
52 KOG1582 UDP-galactose transpor 98.7 3.7E-07 7.9E-12 82.5 13.3 306 17-361 38-352 (367)
53 TIGR00803 nst UDP-galactose tr 98.7 3.5E-08 7.7E-13 89.5 6.3 204 114-339 6-221 (222)
54 PF13536 EmrE: Multidrug resis 98.5 1.5E-07 3.2E-12 76.1 6.2 105 238-343 3-107 (113)
55 PF03151 TPT: Triose-phosphate 98.5 8.4E-07 1.8E-11 75.3 10.8 133 22-161 1-150 (153)
56 PTZ00343 triose or hexose phos 98.5 1.6E-06 3.4E-11 84.2 13.0 152 209-365 55-207 (350)
57 TIGR00776 RhaT RhaT L-rhamnose 98.4 2.5E-06 5.5E-11 80.6 12.5 129 19-163 150-287 (290)
58 COG0697 RhaT Permeases of the 98.4 3.8E-06 8.2E-11 78.5 12.6 133 20-163 153-286 (292)
59 PF06027 DUF914: Eukaryotic pr 98.4 4.4E-06 9.6E-11 79.8 12.4 141 17-165 164-306 (334)
60 COG4975 GlcU Putative glucose 98.3 6E-08 1.3E-12 86.4 -1.3 276 22-340 3-283 (288)
61 PRK15051 4-amino-4-deoxy-L-ara 98.3 2E-06 4.3E-11 69.2 6.8 67 276-342 43-109 (111)
62 COG2962 RarD Predicted permeas 98.2 5.8E-06 1.3E-10 76.0 8.7 138 200-340 4-142 (293)
63 PRK15051 4-amino-4-deoxy-L-ara 98.2 1E-05 2.2E-10 65.1 8.7 69 89-163 40-108 (111)
64 COG5006 rhtA Threonine/homoser 98.2 9.7E-06 2.1E-10 72.8 9.2 136 19-163 146-281 (292)
65 COG5070 VRG4 Nucleotide-sugar 98.2 4.5E-06 9.8E-11 73.5 6.7 269 36-340 21-294 (309)
66 KOG4510 Permease of the drug/m 98.1 7.6E-07 1.6E-11 80.3 -0.1 136 200-343 35-170 (346)
67 PRK02971 4-amino-4-deoxy-L-ara 98.1 2.8E-05 6E-10 64.2 9.1 117 22-163 3-121 (129)
68 PF06800 Sugar_transport: Suga 97.9 5.8E-05 1.3E-09 69.7 9.6 134 17-160 134-267 (269)
69 KOG2922 Uncharacterized conser 97.8 4.1E-05 8.9E-10 71.2 6.5 275 17-344 17-308 (335)
70 PF08449 UAA: UAA transporter 97.7 0.00048 1E-08 65.5 12.1 138 20-164 153-297 (303)
71 PF04657 DUF606: Protein of un 97.6 0.00056 1.2E-08 57.2 9.5 132 204-339 2-138 (138)
72 PRK10452 multidrug efflux syst 97.4 0.00042 9.1E-09 56.3 6.8 69 276-344 36-105 (120)
73 PRK09541 emrE multidrug efflux 97.3 0.00042 9.1E-09 55.5 4.9 68 277-344 37-105 (110)
74 PF10639 UPF0546: Uncharacteri 97.2 0.00088 1.9E-08 53.6 6.0 110 27-162 2-112 (113)
75 PF05653 Mg_trans_NIPA: Magnes 97.1 0.0011 2.3E-08 62.9 6.9 118 199-340 3-120 (300)
76 PRK10650 multidrug efflux syst 97.1 0.0025 5.4E-08 50.9 7.5 63 279-341 44-107 (109)
77 PRK13499 rhamnose-proton sympo 97.1 0.015 3.2E-07 56.0 13.8 146 17-164 170-341 (345)
78 PF04657 DUF606: Protein of un 97.0 0.0042 9E-08 51.9 8.6 130 23-161 3-138 (138)
79 COG3238 Uncharacterized protei 97.0 0.0042 9.2E-08 52.2 8.3 140 202-344 4-148 (150)
80 KOG2765 Predicted membrane pro 97.0 0.0035 7.7E-08 59.7 8.7 141 18-164 244-390 (416)
81 PF04142 Nuc_sug_transp: Nucle 96.8 0.0017 3.8E-08 59.7 5.2 103 266-369 14-131 (244)
82 PRK10452 multidrug efflux syst 96.8 0.0027 5.8E-08 51.6 5.3 66 92-163 36-102 (120)
83 KOG1441 Glucose-6-phosphate/ph 96.8 0.003 6.5E-08 59.9 6.3 138 18-163 160-306 (316)
84 COG2076 EmrE Membrane transpor 96.7 0.0017 3.7E-08 51.1 3.8 64 279-342 39-103 (106)
85 PRK11431 multidrug efflux syst 96.7 0.003 6.6E-08 50.1 5.0 66 277-342 36-102 (105)
86 PRK09541 emrE multidrug efflux 96.6 0.0031 6.7E-08 50.5 4.4 66 92-163 36-102 (110)
87 PRK10650 multidrug efflux syst 96.6 0.015 3.3E-07 46.4 8.1 62 95-162 44-106 (109)
88 PF10639 UPF0546: Uncharacteri 96.5 0.011 2.5E-07 47.2 6.9 109 210-340 3-112 (113)
89 PF00893 Multi_Drug_Res: Small 96.4 0.0034 7.4E-08 48.7 3.6 57 277-333 36-93 (93)
90 PF06379 RhaT: L-rhamnose-prot 96.4 0.22 4.8E-06 47.4 15.9 297 19-341 5-339 (344)
91 COG2076 EmrE Membrane transpor 96.3 0.013 2.8E-07 46.2 6.3 65 93-163 37-102 (106)
92 PRK11431 multidrug efflux syst 96.0 0.01 2.2E-07 47.1 4.5 65 93-163 36-101 (105)
93 COG4975 GlcU Putative glucose 95.7 0.0016 3.4E-08 58.6 -1.7 145 9-163 140-284 (288)
94 PF07857 DUF1632: CEO family ( 95.6 0.048 1E-06 50.2 7.6 196 22-228 1-208 (254)
95 KOG2234 Predicted UDP-galactos 95.6 0.25 5.5E-06 47.1 12.5 162 203-365 15-196 (345)
96 KOG1581 UDP-galactose transpor 95.4 0.14 2.9E-06 47.9 9.7 140 17-164 168-313 (327)
97 KOG1580 UDP-galactose transpor 95.0 0.27 5.7E-06 44.3 10.0 139 19-164 170-313 (337)
98 COG3238 Uncharacterized protei 94.7 0.17 3.6E-06 42.7 7.7 140 19-162 3-144 (150)
99 PF00893 Multi_Drug_Res: Small 94.7 0.09 1.9E-06 40.7 5.8 56 93-154 36-92 (93)
100 TIGR00803 nst UDP-galactose tr 93.9 0.076 1.6E-06 47.9 4.3 136 18-160 82-220 (222)
101 KOG1442 GDP-fucose transporter 92.8 0.44 9.6E-06 43.9 7.4 142 19-167 183-330 (347)
102 KOG4831 Unnamed protein [Funct 92.6 0.6 1.3E-05 36.5 6.7 110 25-162 7-123 (125)
103 KOG1444 Nucleotide-sugar trans 92.5 1.3 2.8E-05 41.8 10.3 152 206-361 15-170 (314)
104 KOG2922 Uncharacterized conser 92.3 0.11 2.3E-06 49.0 2.8 136 197-356 15-151 (335)
105 KOG4314 Predicted carbohydrate 90.1 0.2 4.3E-06 43.9 2.1 76 283-358 66-141 (290)
106 KOG1443 Predicted integral mem 86.8 2.2 4.8E-05 40.1 6.8 146 219-369 32-181 (349)
107 PF06379 RhaT: L-rhamnose-prot 80.1 5 0.00011 38.5 6.4 140 199-341 3-152 (344)
108 COG5070 VRG4 Nucleotide-sugar 80.0 4 8.6E-05 36.7 5.3 137 22-165 156-297 (309)
109 KOG1582 UDP-galactose transpor 79.0 6.2 0.00014 36.6 6.4 140 20-166 189-334 (367)
110 KOG2766 Predicted membrane pro 78.6 2.5 5.4E-05 38.8 3.7 135 18-163 163-298 (336)
111 PF05297 Herpes_LMP1: Herpesvi 78.5 0.66 1.4E-05 42.8 0.0 75 84-163 20-96 (381)
112 PF06570 DUF1129: Protein of u 68.2 76 0.0016 28.2 10.7 49 83-135 144-192 (206)
113 PF07168 Ureide_permease: Urei 67.3 8.1 0.00017 36.4 4.2 130 26-162 1-144 (336)
114 KOG3912 Predicted integral mem 66.5 3.7 7.9E-05 38.2 1.8 63 279-341 95-157 (372)
115 PF04342 DUF486: Protein of un 65.6 3.2 7E-05 32.6 1.1 34 309-342 75-108 (108)
116 PF07857 DUF1632: CEO family ( 57.7 5.5 0.00012 36.8 1.4 126 204-341 1-133 (254)
117 KOG4831 Unnamed protein [Funct 55.8 35 0.00075 26.9 5.2 58 282-340 64-123 (125)
118 COG3169 Uncharacterized protei 55.3 10 0.00022 29.3 2.2 34 309-342 82-115 (116)
119 KOG1583 UDP-N-acetylglucosamin 51.4 2.2E+02 0.0047 26.9 10.5 135 19-164 162-314 (330)
120 PF04342 DUF486: Protein of un 47.8 42 0.00091 26.5 4.6 29 127-161 77-105 (108)
121 PF07168 Ureide_permease: Urei 47.6 18 0.00039 34.1 3.0 129 209-340 2-144 (336)
122 PF08119 Toxin_31: Scorpion ac 46.6 7.2 0.00016 23.3 0.2 10 359-368 23-32 (37)
123 PF02694 UPF0060: Uncharacteri 44.8 20 0.00043 28.3 2.4 37 306-342 67-103 (107)
124 PRK02237 hypothetical protein; 44.3 23 0.00049 28.1 2.7 38 304-341 67-104 (109)
125 COG4858 Uncharacterized membra 41.3 93 0.002 27.3 6.1 25 270-294 128-152 (226)
126 PF10101 DUF2339: Predicted me 41.0 4.8E+02 0.01 27.9 23.6 58 300-357 226-285 (745)
127 PF15108 TMEM37: Voltage-depen 34.2 1.1E+02 0.0024 26.0 5.3 81 148-252 91-173 (184)
128 COG4858 Uncharacterized membra 33.7 3.3E+02 0.0072 24.0 8.7 113 23-143 102-215 (226)
129 COG4657 RnfA Predicted NADH:ub 32.1 1.9E+02 0.0041 24.8 6.4 54 199-252 128-186 (193)
130 COG1968 BacA Undecaprenyl pyro 31.6 4.4E+02 0.0094 24.6 16.1 89 21-113 85-173 (270)
131 PF09945 DUF2177: Predicted me 30.9 2.7E+02 0.0059 22.8 7.1 42 206-249 79-120 (128)
132 PF15111 TMEM101: TMEM101 prot 26.0 5.1E+02 0.011 23.7 12.7 41 120-162 19-59 (251)
133 COG3169 Uncharacterized protei 23.7 3.6E+02 0.0078 21.1 6.3 30 127-162 84-113 (116)
134 PF10754 DUF2569: Protein of u 22.9 1.9E+02 0.0041 24.2 5.1 30 199-228 117-146 (149)
135 PRK02237 hypothetical protein; 21.3 80 0.0017 25.0 2.2 34 124-163 71-104 (109)
136 PF03595 SLAC1: Voltage-depend 20.7 5.6E+02 0.012 24.1 8.6 78 148-252 6-91 (330)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=1.2e-35 Score=286.41 Aligned_cols=312 Identities=26% Similarity=0.497 Sum_probs=248.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhh-ccCCCCCHHHHHHHHHHHHHHH
Q 017167 18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEK-KERPAMTLNFALQFILLALVGI 96 (376)
Q Consensus 18 ~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~ 96 (376)
|+.+++..|++..+.++...++.|.+.+.|++|..+.++|+.+++++++++.+.+++ +.+++.+++++.++.+.|+++
T Consensus 10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g- 88 (358)
T PLN00411 10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG- 88 (358)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-
Confidence 356789999999999999999999999999999999999999999999999876544 233445678889999999998
Q ss_pred HHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCC
Q 017167 97 TANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPP 176 (376)
Q Consensus 97 ~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~ 176 (376)
...+.+++.|++++++++++++.++.|+++.+++++++.|+++.+||.++.+++|++++++|+.++..++++.... +++
T Consensus 89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~-~~~ 167 (358)
T PLN00411 89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFV-ASS 167 (358)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccc-ccc
Confidence 5788899999999999999999999999999999999655555555555579999999999999987544321100 000
Q ss_pred --------CCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHH
Q 017167 177 --------LNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFM 248 (376)
Q Consensus 177 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (376)
..++.++ ...+...|++++++++++|++|++++|+..+++++....+++++..+.+...
T Consensus 168 ~~~~~~~~~~~~~~~-------------~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~ 234 (358)
T PLN00411 168 PPYLNFRQLSPPLSS-------------SNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTS 234 (358)
T ss_pred cccccccccccccCC-------------CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHH
Confidence 0000001 2234567999999999999999999999999986555667788887777776
Q ss_pred HHHHHhhc-CcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccc
Q 017167 249 IIAAIFER-NLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGY 327 (376)
Q Consensus 249 ~~~~~~~~-~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~ 327 (376)
+.....++ +...|..........+++.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.++
T Consensus 235 ~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~ 313 (358)
T PLN00411 235 MIGLVVEKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCL 313 (358)
T ss_pred HHHHHHccCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHH
Confidence 66665443 2222221122234457777776 678999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhhhhcccccc
Q 017167 328 VPATSPARSILLPNRWMS 345 (376)
Q Consensus 328 iG~~lI~~gi~l~~~~~~ 345 (376)
+|+++|+.|+++.+++++
T Consensus 314 iG~~LIl~Gv~l~~~~~~ 331 (358)
T PLN00411 314 IGGILITLGFYAVMWGKA 331 (358)
T ss_pred HHHHHHHHHHHHHHhhhh
Confidence 999999999999875433
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=2.2e-31 Score=251.83 Aligned_cols=279 Identities=18% Similarity=0.195 Sum_probs=233.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017167 22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG 101 (376)
Q Consensus 22 g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 101 (376)
-++..++..++||.+++..|...+ +++|.+++++|+.++.++++++...+++ + ..+++++......|.++...++.
T Consensus 9 ~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~~-~--~~~~~~~~~~~~~g~~~~~~~~~ 84 (292)
T PRK11272 9 LFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLRGH-P--LPTLRQWLNAALIGLLLLAVGNG 84 (292)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHhCC-C--CCcHHHHHHHHHHHHHHHHHHHH
Confidence 356678888999999999999988 5999999999999999998888755322 2 23567788888899887677888
Q ss_pred HHHHhc-ccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCC
Q 017167 102 FYLLGL-ENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQI 180 (376)
Q Consensus 102 ~~~~al-~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~ 180 (376)
+++++. ++++++.++++.++.|+++.+++++ +|||+++ .+++|++++++|+.++.. +++
T Consensus 85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~------~~~~~~~la~~Gv~ll~~-~~~------------ 144 (292)
T PRK11272 85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRK------LEWLGIAIGLAGIVLLNS-GGN------------ 144 (292)
T ss_pred HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCch------hHHHHHHHHHHhHHHHhc-Ccc------------
Confidence 999998 9999999999999999999999986 6999999 599999999999998851 111
Q ss_pred CCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCccc
Q 017167 181 QPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDA 260 (376)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (376)
. +....|++++++++++|+.|.+..||..++ ++...+.+++..+.+...+.....+.+..
T Consensus 145 ----------------~-~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 204 (292)
T PRK11272 145 ----------------L-SGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLT- 204 (292)
T ss_pred ----------------c-ccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCccc-
Confidence 1 123579999999999999999999986543 34566788888888877776654332211
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhc
Q 017167 261 WIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLP 340 (376)
Q Consensus 261 ~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~ 340 (376)
...+...|..+++.+++++.+++.+|++++++.++++++.+.+++|+++++++++++||++++.+++|+++|+.|+++.
T Consensus 205 -~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~ 283 (292)
T PRK11272 205 -ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLV 283 (292)
T ss_pred -ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH
Confidence 1124467889999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccccc
Q 017167 341 NRWMS 345 (376)
Q Consensus 341 ~~~~~ 345 (376)
+++++
T Consensus 284 ~~~~~ 288 (292)
T PRK11272 284 TLGKY 288 (292)
T ss_pred HHHHh
Confidence 76544
No 3
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.97 E-value=9.5e-31 Score=248.24 Aligned_cols=276 Identities=13% Similarity=0.175 Sum_probs=214.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017167 23 HLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGF 102 (376)
Q Consensus 23 ~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 102 (376)
.+++++++++||.+++..|...++ ++|..+.++|+.++++.+.++.. ++ +.++ ......|+......+.+
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~~---~~---~~~~---~~~~~~g~~~~~~~~~~ 75 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFVA---RP---KVPL---NLLLGYGLTISFGQFAF 75 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHhc---CC---CCch---HHHHHHHHHHHHHHHHH
Confidence 456889999999999999999984 99999999999998776665542 11 1122 23444455544456667
Q ss_pred HHHhccc-CCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCC
Q 017167 103 YLLGLEN-TSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQ 181 (376)
Q Consensus 103 ~~~al~~-~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~ 181 (376)
++.++++ .++++++++.++.|+++.+++++++|||++.+ ++++++++++|+.++. .++..
T Consensus 76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~--~~~~~----------- 136 (299)
T PRK11453 76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLI--EDSLN----------- 136 (299)
T ss_pred HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhc--cccCC-----------
Confidence 7889888 58899999999999999999999999999994 9999999999999886 22110
Q ss_pred CCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCc--chhHHHHHHHHHHHHHHHHHHhhcCc-
Q 017167 182 PDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPAR--LSVTAYTCFFGLIQFMIIAAIFERNL- 258 (376)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~- 258 (376)
....+..|+.++++++++|+.|.++.|+..++.+++ .....+.+..+.+.........+.+.
T Consensus 137 ---------------~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (299)
T PRK11453 137 ---------------GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSAT 201 (299)
T ss_pred ---------------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchh
Confidence 112234799999999999999999999987665322 23344555555444443333333221
Q ss_pred --ccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhh
Q 017167 259 --DAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARS 336 (376)
Q Consensus 259 --~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~g 336 (376)
..+...+...|..+++.++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++|+.|
T Consensus 202 ~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~g 281 (299)
T PRK11453 202 MIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAG 281 (299)
T ss_pred hhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHH
Confidence 111223456788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccc
Q 017167 337 ILLPNR 342 (376)
Q Consensus 337 i~l~~~ 342 (376)
+++..+
T Consensus 282 v~l~~~ 287 (299)
T PRK11453 282 LYINVF 287 (299)
T ss_pred HHHHhc
Confidence 998653
No 4
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.97 E-value=3.2e-30 Score=244.19 Aligned_cols=281 Identities=13% Similarity=0.113 Sum_probs=211.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHH
Q 017167 20 LQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITAN 99 (376)
Q Consensus 20 ~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 99 (376)
.+++++++++.++||.+++..|...++ ++|..+.++|+.++.+++.++.. +++. + ++.++....+.++.+.+
T Consensus 3 ~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~~---~~~~---~-~~~~~~~~~~~l~~~~~ 74 (295)
T PRK11689 3 QKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTVG---FPRL---R-QFPKRYLLAGGLLFVSY 74 (295)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHcc---cccc---c-cccHHHHHHHhHHHHHH
Confidence 456788999999999999999999984 99999999999999998887631 1111 1 11223444555556677
Q ss_pred HHHHHHhcc----cCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCC
Q 017167 100 QGFYLLGLE----NTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAP 175 (376)
Q Consensus 100 ~~~~~~al~----~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~ 175 (376)
..+++.+++ ..++.+++++.++.|+++.+++++++|||+++ .+++|++++++|+.++.. .++....
T Consensus 75 ~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~------~~~~g~~l~~~Gv~li~~-~~~~~~~--- 144 (295)
T PRK11689 75 EICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANW------LLIPGLLLALAGVAWVLG-GDNGLSL--- 144 (295)
T ss_pred HHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccH------HHHHHHHHHHHhHhheec-CCccchh---
Confidence 777777775 46778888999999999999999999999999 599999999999999862 1110000
Q ss_pred CCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhh
Q 017167 176 PLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFE 255 (376)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (376)
.+. .+ +..+...|+.++++++++|+.|.++.||..+++ ++... .. ..+.+.+.+.... +
T Consensus 145 --~~~-~~-------------~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~--~~-~~~~~~l~~~~~~-~ 203 (295)
T PRK11689 145 --AEL-IN-------------NIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITL--FF-ILTALALWIKYFL-S 203 (295)
T ss_pred --hhh-hh-------------ccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhH--HH-HHHHHHHHHHHHH-h
Confidence 000 00 111235699999999999999999999987665 45443 22 2233333332332 2
Q ss_pred cCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhh
Q 017167 256 RNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPAR 335 (376)
Q Consensus 256 ~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~ 335 (376)
+.. . ...+...|..+++.++ +++++|.+|++++|+.++++++.+.+++|+++.+++++++||++++.+++|+++|+.
T Consensus 204 ~~~-~-~~~~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~ 280 (295)
T PRK11689 204 PQP-A-MVFSLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTA 280 (295)
T ss_pred cCc-c-ccCCHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 221 1 1224466777888785 689999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccc
Q 017167 336 SILLPNR 342 (376)
Q Consensus 336 gi~l~~~ 342 (376)
|+++...
T Consensus 281 gv~~~~~ 287 (295)
T PRK11689 281 GSLLCWL 287 (295)
T ss_pred hHHHHhh
Confidence 9977653
No 5
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.97 E-value=9e-30 Score=236.42 Aligned_cols=259 Identities=19% Similarity=0.224 Sum_probs=219.6
Q ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCc
Q 017167 33 YAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSP 112 (376)
Q Consensus 33 ~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~ 112 (376)
||.+++..|...+++.++.+..+.|++.+.+++.++...+ .+++++.+.+..|.++..+++.++++|++++++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~ 73 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV 73 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 8999999999988668999999999999988887765431 245667788899988888999999999999999
Q ss_pred cceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCCCCCcchhhhcc
Q 017167 113 TFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLS 192 (376)
Q Consensus 113 ~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (376)
++++++.++.|+++.+++++++|||+++ .+++|++++++|+.++. ..+
T Consensus 74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~------~~~~gi~i~~~Gv~li~-~~~------------------------- 121 (260)
T TIGR00950 74 GEAALLLYLAPLYVTLLSDLMGKERPRK------LVLLAAVLGLAGAVLLL-SDG------------------------- 121 (260)
T ss_pred hhhHHHHhhhHHHHHHHHHHHccCCCcH------HHHHHHHHHHHhHHhhc-cCC-------------------------
Confidence 9999999999999999999999999999 59999999999999985 221
Q ss_pred ccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHH
Q 017167 193 LGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFS 271 (376)
Q Consensus 193 ~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (376)
+.+....|+.++++++++|+.+.+..|+..++.+ ++.....+++..+.+...+.....++.. . .+...|..
T Consensus 122 ----~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~---~~~~~~~~ 193 (260)
T TIGR00950 122 ----NLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-Q---ALSLQWGA 193 (260)
T ss_pred ----cccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-C---cchHHHHH
Confidence 1123468999999999999999999999887663 2334455678888888877766433221 1 14456777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhh
Q 017167 272 ILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSIL 338 (376)
Q Consensus 272 ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~ 338 (376)
+++.+++++.+++.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|..+++.|+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 194 LLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 8999999899999999999999999999999999999999999999999999999999999999863
No 6
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.97 E-value=2.1e-29 Score=238.33 Aligned_cols=274 Identities=11% Similarity=0.103 Sum_probs=220.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHH
Q 017167 18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGIT 97 (376)
Q Consensus 18 ~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 97 (376)
++.+++.++++++++|+.+..+.|++.++ .+|.++.++|++++.++++++... ++ .+.++++++..+..|.+. .
T Consensus 9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~--~~--~~~~~~~~~~~~~~g~~~-~ 82 (293)
T PRK10532 9 PVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKP--WR--LRFAKEQRLPLLFYGVSL-G 82 (293)
T ss_pred ccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhH--Hh--ccCCHHHHHHHHHHHHHH-H
Confidence 45789999999999999999999999995 999999999999999988876532 11 134567778888888874 6
Q ss_pred HHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCC
Q 017167 98 ANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPL 177 (376)
Q Consensus 98 ~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~ 177 (376)
..+.++++++++++++.++++.++.|+++.+++. ||.. +..++.++++|+.++. ..+..
T Consensus 83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--------~~~~~~i~~~Gv~li~-~~~~~-------- 141 (293)
T PRK10532 83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--------DFVWVVLAVLGLWFLL-PLGQD-------- 141 (293)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--------HHHHHHHHHHHHheee-ecCCC--------
Confidence 7888899999999999999999999999998863 4322 3345778899998875 22211
Q ss_pred CCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcC
Q 017167 178 NQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERN 257 (376)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (376)
.+.....|++++++++++|+.|.+..|+..+++ ++... .++...+.+.+.++....+.
T Consensus 142 -------------------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~~- 199 (293)
T PRK10532 142 -------------------VSHVDLTGAALALGAGACWAIYILSGQRAGAEH-GPATV-AIGSLIAALIFVPIGALQAG- 199 (293)
T ss_pred -------------------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHH-HHHHHHHHHHHHHHHHHccC-
Confidence 112235799999999999999999999987776 45554 45666667666666654321
Q ss_pred cccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhh
Q 017167 258 LDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSI 337 (376)
Q Consensus 258 ~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi 337 (376)
... .+...+..+++.|++++.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+
T Consensus 200 ~~~---~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~ 276 (293)
T PRK10532 200 EAL---WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAAS 276 (293)
T ss_pred ccc---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHH
Confidence 111 13344556789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccc
Q 017167 338 LLPNRW 343 (376)
Q Consensus 338 ~l~~~~ 343 (376)
+...++
T Consensus 277 ~~~~~~ 282 (293)
T PRK10532 277 MGSTLT 282 (293)
T ss_pred HHHHhc
Confidence 987543
No 7
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.97 E-value=9.8e-30 Score=240.93 Aligned_cols=277 Identities=13% Similarity=0.074 Sum_probs=206.7
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccC--C-CCCHHHHHHHHHH
Q 017167 15 SVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKER--P-AMTLNFALQFILL 91 (376)
Q Consensus 15 ~~~~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~--~-~~~~~~~~~~~~~ 91 (376)
+++++.+|++++++++++||...++.|.. + +++|.++.++|+.++.+++.++...+++... + ..+++++. ....
T Consensus 2 ~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 78 (296)
T PRK15430 2 DAKQTRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIF-MLAV 78 (296)
T ss_pred CchhhhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHH-HHHH
Confidence 34567789999999999999999999985 5 4999999999999999888777654321110 0 11334433 3446
Q ss_pred HHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCccc
Q 017167 92 ALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIY 171 (376)
Q Consensus 92 g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~ 171 (376)
+.++.+.++.++++|++++++++++++.++.|+++.+++++++|||+++ .+++|++++++|+.++.. . .
T Consensus 79 ~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~------~~~~g~~l~~~Gv~li~~-~--~-- 147 (296)
T PRK15430 79 SAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRR------MQWLAVILAICGVLVQLW-T--F-- 147 (296)
T ss_pred HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcH------HHHHHHHHHHHHHHHHHH-H--c--
Confidence 6666788999999999999999999999999999999999999999999 599999999999999862 1 1
Q ss_pred CCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHH
Q 017167 172 SPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMII 250 (376)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 250 (376)
++. ..++++++++|+.|.+..|+..++.. +....+.+....+.....+.
T Consensus 148 -------------------------~~~-----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (296)
T PRK15430 148 -------------------------GSL-----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI 197 (296)
T ss_pred -------------------------CCc-----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 111 14678899999999999888643221 11222333333333322211
Q ss_pred HHHhhcCcccccccCCch-hHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccc
Q 017167 251 AAIFERNLDAWIFHNGGE-VFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVP 329 (376)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~-~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG 329 (376)
.......+. .++.. +..+++.|+ .+.+++.+|++++++.++++++++.+++|+++.+++++++||++++.+++|
T Consensus 198 ---~~~~~~~~~-~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G 272 (296)
T PRK15430 198 ---ADSSTSHMG-QNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVT 272 (296)
T ss_pred ---ccCCccccc-CCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 111111111 11222 333444555 588999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhc
Q 017167 330 ATSPARSILLP 340 (376)
Q Consensus 330 ~~lI~~gi~l~ 340 (376)
+++|+.|+.+.
T Consensus 273 ~~lI~~~~~v~ 283 (296)
T PRK15430 273 FAFIWVALAIF 283 (296)
T ss_pred HHHHHHHHHHH
Confidence 99998777664
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.96 E-value=2e-27 Score=225.83 Aligned_cols=281 Identities=14% Similarity=0.078 Sum_probs=219.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017167 24 LAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFY 103 (376)
Q Consensus 24 ~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 103 (376)
++.++.-++-....++.|.+.++...|...++.|+.++.+...+.. ..+.+++++.+++++++.+..|++. +....+.
T Consensus 5 ~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~ 82 (302)
T TIGR00817 5 LLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSW-SSGLPKRLKISSALLKLLLPVAIVH-TIGHVTS 82 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHH
Confidence 3444555555566688999998536689999999999877665552 2222334557889999999999996 7889999
Q ss_pred HHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCCCC
Q 017167 104 LLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPD 183 (376)
Q Consensus 104 ~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~ 183 (376)
+++++++++++++++.++.|+++++++++++|||++. .++.+++++++|+.+.. .++
T Consensus 83 ~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~------~~~~~l~l~~~Gv~l~~--~~~--------------- 139 (302)
T TIGR00817 83 NVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPS------TLWLSLLPIVGGVALAS--DTE--------------- 139 (302)
T ss_pred HHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcH------HHHHHHHHHHHHHhhhc--CCc---------------
Confidence 9999999999999999999999999999999999999 49999999999998653 111
Q ss_pred CcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhh--hCCCcchhHHHHHHHHHHHHHHHHHHhhcCccc-
Q 017167 184 SLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLK--KYPARLSVTAYTCFFGLIQFMIIAAIFERNLDA- 260 (376)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 260 (376)
.+....|++++++++++|++|.++.||..+ ++ ++...+.+++..+.+.++|.....++....
T Consensus 140 --------------~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 204 (302)
T TIGR00817 140 --------------LSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLP 204 (302)
T ss_pred --------------ccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHH
Confidence 122357999999999999999999999887 55 688999999999999999987765431111
Q ss_pred --ccc----cCCch-hHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhh
Q 017167 261 --WIF----HNGGE-VFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSP 333 (376)
Q Consensus 261 --~~~----~~~~~-~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI 333 (376)
+.. ..... +...+..+..+....+.++++++++.+|++.++..+++|+++++++++++||++++.+++|++++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~li 284 (302)
T TIGR00817 205 HGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIA 284 (302)
T ss_pred HHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHH
Confidence 000 00011 11122222222233334666899999999999999999999999999999999999999999999
Q ss_pred hhhhhhccccc
Q 017167 334 ARSILLPNRWM 344 (376)
Q Consensus 334 ~~gi~l~~~~~ 344 (376)
+.|+++.++.+
T Consensus 285 l~Gv~l~~~~k 295 (302)
T TIGR00817 285 IAGVFLYSRVK 295 (302)
T ss_pred HHHHHHHHHHh
Confidence 99999998643
No 9
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.95 E-value=1.9e-26 Score=216.84 Aligned_cols=275 Identities=12% Similarity=0.146 Sum_probs=203.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017167 23 HLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLE-KKERPAMTLNFALQFILLALVGITANQG 101 (376)
Q Consensus 23 ~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 101 (376)
+++.++++++|+..++..|...++ -++ ..+++.....+++.++...+. +++++..++ +++..+..+.++...++.
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 78 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPA-TFWLLLAISAVANMVYFL 78 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcch-hhHHHHHHHHHHHHHHHH
Confidence 567899999999999999976653 333 457777777777777765431 223333333 444455555555688999
Q ss_pred HHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCC
Q 017167 102 FYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQ 181 (376)
Q Consensus 102 ~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~ 181 (376)
+++.|+++.++++++++.++.|+++++++++++|||+++ .+++|+.+++.|+.++.. + +.
T Consensus 79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~------~~~~g~~~~~~Gv~ll~~-~-~~------------ 138 (281)
T TIGR03340 79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSP------LAWLGILIITLGLLVLGL-S-RF------------ 138 (281)
T ss_pred HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCH------HHHHHHHHHHHHHHHHhc-c-cc------------
Confidence 999999999999999999999999999999999999999 599999999999998862 1 11
Q ss_pred CCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHH-HHHHHHhh-cCcc
Q 017167 182 PDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQF-MIIAAIFE-RNLD 259 (376)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~ 259 (376)
. ..+..|+.++++++++|+.|.+..|+..++.+ +..........+.+.. .+...... .+..
T Consensus 139 ---------------~-~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (281)
T TIGR03340 139 ---------------A-QHRRKAYAWALAAALGTAIYSLSDKAAALGVP-AFYSALGYLGIGFLAMGWPFLLLYLKRHGR 201 (281)
T ss_pred ---------------c-ccchhHHHHHHHHHHHHHHhhhhccccccchh-cccccHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1 12246888999999999999999887654442 2221111122222221 22222111 0111
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhh
Q 017167 260 AWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILL 339 (376)
Q Consensus 260 ~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l 339 (376)
... .+...++.+++.+.+++.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++
T Consensus 202 ~~~-~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 202 SMF-PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred chh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 111 1223455667778788999999999999999999999999999999999999999999999999999999999976
No 10
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.94 E-value=5.7e-25 Score=212.72 Aligned_cols=284 Identities=15% Similarity=0.159 Sum_probs=224.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHHHHhhhhccCCCC--CHHHHHHHHHHHHHH
Q 017167 19 KLQLHLAMVALQFGYAGFHVVSRAALNMGIS-KLVFPVYRNIIAFLLLLPFAYFLEKKERPAM--TLNFALQFILLALVG 95 (376)
Q Consensus 19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~-~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~ 95 (376)
+.+..++.+..-.+-.......|.+++. ++ |+.++.+|++++.++...++... .+++++. .+++++..+..|+++
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~llp~gl~~ 124 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATG-FRKIPRIKSLKLFLKNFLPQGLCH 124 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHHHHH
Confidence 5666667777777777788999999985 99 99999999999988765554332 2222333 355788899999998
Q ss_pred HHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCC
Q 017167 96 ITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAP 175 (376)
Q Consensus 96 ~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~ 175 (376)
.. .+...+.|+++++++.++++.++.|+++++++++++|||+++ .+++++++++.|+.+... ++
T Consensus 125 ~~-~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~------~~~l~l~l~v~Gv~l~~~--~~------- 188 (350)
T PTZ00343 125 LF-VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNL------YAYLSLIPIVGGVALASV--KE------- 188 (350)
T ss_pred HH-HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccH------HHHHHHHHHHHHHHheec--cc-------
Confidence 64 466677999999999999999999999999999999999999 599999999999999862 21
Q ss_pred CCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCC------CcchhHHHHHHHHHHHHHH
Q 017167 176 PLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP------ARLSVTAYTCFFGLIQFMI 249 (376)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 249 (376)
.+.+..|++++++|+++|+.++++.|+..++.+ ++.+...++...+.+.++|
T Consensus 189 ----------------------~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp 246 (350)
T PTZ00343 189 ----------------------LHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLP 246 (350)
T ss_pred ----------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 122467999999999999999999999887542 2445566668899999998
Q ss_pred HHHHhhcCc--cccc----ccCCchhHHHHHHHHHHHHHHHHHHHH----HHhcCCceeeeecchhHHHHHHHHHHHHhC
Q 017167 250 IAAIFERNL--DAWI----FHNGGEVFSILYAGVVASGIAFAVQIW----CIDRGGPVFVAVYQPVQTLVVAIMASFALG 319 (376)
Q Consensus 250 ~~~~~~~~~--~~~~----~~~~~~~~~ll~~g~~~~~~~~~l~~~----al~~~~a~~~s~~~~l~pv~a~l~~~l~l~ 319 (376)
+....+... ..+. ..+...+..+++. ++.+++.+.+|+. ++++.+|...++.++++|+++++++++++|
T Consensus 247 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~g 325 (350)
T PTZ00343 247 LVLFFEGKKWVPVWTNYTANMTNYTKGIIIFK-IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQ 325 (350)
T ss_pred HHHHHhhHHHHHHHHHhhhcccccchHHHHHH-HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhC
Confidence 877554311 1110 0011122334443 4458899999985 999999999999999999999999999999
Q ss_pred Cccccccccchhhhhhhhhhcccc
Q 017167 320 EEFYLGGYVPATSPARSILLPNRW 343 (376)
Q Consensus 320 e~~~~~~~iG~~lI~~gi~l~~~~ 343 (376)
|++++.+++|+++++.|++++++-
T Consensus 326 e~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 326 TQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred CCCchHhHHHHHHHHHHHHHHhhc
Confidence 999999999999999999998753
No 11
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.93 E-value=1.8e-24 Score=200.76 Aligned_cols=248 Identities=11% Similarity=0.067 Sum_probs=182.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhcc-----CCCCCHHH-HHHHHHHHHH
Q 017167 21 QLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKE-----RPAMTLNF-ALQFILLALV 94 (376)
Q Consensus 21 ~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~-----~~~~~~~~-~~~~~~~g~~ 94 (376)
+|++++++++++||.+.++.|. .+ +++|.+++++|++++.+++.++...+++++ .++.++++ +..+...|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LK-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hc-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 4788999999999999999998 45 499999999999999988877664432211 11122333 3445666666
Q ss_pred HHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCC
Q 017167 95 GITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPA 174 (376)
Q Consensus 95 ~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~ 174 (376)
...++.++++|++++++++++++.++.|+++++++++++|||+++ .++++++++++|+.++.. ++
T Consensus 80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~------~~~l~~~~~~~Gv~li~~--~~------ 144 (256)
T TIGR00688 80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISR------FQFIAVIIATLGVISNIV--LK------ 144 (256)
T ss_pred -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCH------HHHHHHHHHHHHHHHHHH--Hc------
Confidence 478999999999999999999999999999999999999999999 599999999999998852 11
Q ss_pred CCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHh
Q 017167 175 PPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIF 254 (376)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (376)
.+. . .++++++++|+.|.+..|+..++ +........ ........+... .
T Consensus 145 ----------------------~~~-~----~~~l~aa~~~a~~~i~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~-~ 193 (256)
T TIGR00688 145 ----------------------GSL-P----WEALVLAFSFTAYGLIRKALKNT--DLAGFCLET-LSLMPVAIYYLL-Q 193 (256)
T ss_pred ----------------------CCc-h----HHHHHHHHHHHHHHHHHhhcCCC--CcchHHHHH-HHHHHHHHHHHH-H
Confidence 111 1 35789999999999998886543 222221111 111111111111 1
Q ss_pred hcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHH
Q 017167 255 ERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFA 317 (376)
Q Consensus 255 ~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~ 317 (376)
.+........+..+|..+++.|++ +.++|.+|++++|+.++++++++.+++|+++.+++.++
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 194 TDFATVQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred hccCcccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 111111111122478888888886 89999999999999999999999999999999999864
No 12
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.91 E-value=6.5e-23 Score=192.39 Aligned_cols=281 Identities=22% Similarity=0.302 Sum_probs=216.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 017167 19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA 98 (376)
Q Consensus 19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 98 (376)
...+..+.++....|+......|...+...++....+.|...+.++..+.... ++....+ ..+.+++....+.+....
T Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 82 (292)
T COG0697 5 LLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL-EPRGLRP-ALRPWLLLLLLALLGLAL 82 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHh-hcccccc-cccchHHHHHHHHHHHHH
Confidence 45577888888999999999999988742566666677999988873333322 1111111 112245677777777789
Q ss_pred HHHHHHHhcccCCccceeecccchhHHHHHHHH-HHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCC
Q 017167 99 NQGFYLLGLENTSPTFASAIQNSVPAITFLMAA-IFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPL 177 (376)
Q Consensus 99 ~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~-l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~ 177 (376)
++.+++.++++++++.++++.++.|+++.++++ +++|||+++ .++.++.+.+.|+.++.. .+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~------~~~~~~~~~~~Gv~lv~~-~~~~-------- 147 (292)
T COG0697 83 PFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSL------LQILGILLALAGVLLILL-GGGG-------- 147 (292)
T ss_pred HHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcH------HHHHHHHHHHHhHHheec-CCCc--------
Confidence 999999999999999999999999999999997 777999999 599999999999999972 1111
Q ss_pred CCCCCCCcchhhhccccCCCCCc-hhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHH-HHHHHHHHHHHHHHHHhh
Q 017167 178 NQIQPDSLTSTIFLSLGDAKGKN-WTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTA-YTCFFGLIQFMIIAAIFE 255 (376)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 255 (376)
... ...|+.+.++++++|+.+.+..|+.. +. ++..... +..........+... .
T Consensus 148 --------------------~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~--~ 203 (292)
T COG0697 148 --------------------GGILSLLGLLLALAAALLWALYTALVKRLS-RL-GPVTLALLLQLLLALLLLLLFFL--S 203 (292)
T ss_pred --------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ChHHHHHHHHHHHHHHHHHHHHh--c
Confidence 111 56899999999999999999999877 44 3444444 333311111112111 1
Q ss_pred cCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhh
Q 017167 256 RNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPAR 335 (376)
Q Consensus 256 ~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~ 335 (376)
... ...+...+..+.+.|++++++++.+|++++++.++.+.+...+++|+++.+++++++||+++..+++|+.+++.
T Consensus 204 ~~~---~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~ 280 (292)
T COG0697 204 GFG---APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVL 280 (292)
T ss_pred ccc---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 111 12245678889999999888999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccc
Q 017167 336 SILLPNRW 343 (376)
Q Consensus 336 gi~l~~~~ 343 (376)
|+.+.+++
T Consensus 281 g~~l~~~~ 288 (292)
T COG0697 281 GVLLASLR 288 (292)
T ss_pred HHHHHhcc
Confidence 99999876
No 13
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.91 E-value=1.9e-22 Score=191.24 Aligned_cols=296 Identities=17% Similarity=0.191 Sum_probs=231.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHHHHhhhh-ccCCCCCHHHHHHHHHHHHHHH
Q 017167 19 KLQLHLAMVALQFGYAGFHVVSRAALNMGIS-KLVFPVYRNIIAFLLLLPFAYFLEK-KERPAMTLNFALQFILLALVGI 96 (376)
Q Consensus 19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~-~~~~~~~r~~~a~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~ 96 (376)
-++..++.=..+++-......+..+.++|.+ |..-.++.++.-.++..+...++++ +++.+..+++|+++++.+++.
T Consensus 11 ~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D- 89 (334)
T PF06027_consen 11 FWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD- 89 (334)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH-
Confidence 4555666666677888888888888876665 6666677777766666666555433 233344567888899999997
Q ss_pred HHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCC
Q 017167 97 TANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPP 176 (376)
Q Consensus 97 ~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~ 176 (376)
..++.+.+.|++|++.+.++++..+.-+++.+++++++|||.++ .+++|+++++.|+.++...+....++
T Consensus 90 v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~------~~~~gv~i~i~Gv~lv~~sD~~~~~~---- 159 (334)
T PF06027_consen 90 VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSW------FHILGVLICIAGVVLVVVSDVLSGSD---- 159 (334)
T ss_pred HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhH------HHHHHHHHHHhhhhheeeeccccccc----
Confidence 58999999999999999999999999999999999999999999 69999999999999987432221110
Q ss_pred CCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhc
Q 017167 177 LNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFER 256 (376)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (376)
++..++..+||+++++++++||+++++.++..++. +......+.-+++.++..+...+.|.
T Consensus 160 ------------------~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~ 220 (334)
T PF06027_consen 160 ------------------SSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILER 220 (334)
T ss_pred ------------------CCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheeh
Confidence 00345668999999999999999999999999988 47788888888888888887776654
Q ss_pred C-cccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhh
Q 017167 257 N-LDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPAR 335 (376)
Q Consensus 257 ~-~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~ 335 (376)
. ....+ +.......+....++...-|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++|+.
T Consensus 221 ~~i~~~~--w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIii 298 (334)
T PF06027_consen 221 SGIESIH--WTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIII 298 (334)
T ss_pred hhhhccC--CChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHH
Confidence 2 22211 22233333333344567778888899999999999999999999999999999999999999999999999
Q ss_pred hhhhccccccc
Q 017167 336 SILLPNRWMST 346 (376)
Q Consensus 336 gi~l~~~~~~~ 346 (376)
|.++.+..+++
T Consensus 299 G~vvy~~~~~~ 309 (334)
T PF06027_consen 299 GFVVYNLAESP 309 (334)
T ss_pred HhheEEccCCc
Confidence 99998754443
No 14
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.88 E-value=3.5e-21 Score=170.13 Aligned_cols=274 Identities=15% Similarity=0.141 Sum_probs=227.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017167 22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG 101 (376)
Q Consensus 22 g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 101 (376)
++..++.++..-=...-+.|.++.. .++...+++|..++.+++.++.... +.+..++++...+..|+.. ..-|.
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~RPw----r~r~~~~~~~~~~~yGvsL-g~MNl 86 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFRPW----RRRLSKPQRLALLAYGVSL-GGMNL 86 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhhHH----HhccChhhhHHHHHHHHHH-HHHHH
Confidence 6788888888888888899999996 9999999999999999999987443 2456788889999999885 67889
Q ss_pred HHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCC
Q 017167 102 FYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQ 181 (376)
Q Consensus 102 ~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~ 181 (376)
+||.+++++|.+.+..+.++.|+..++++. |+ . .+.+-+.+++.|..++.. .++.
T Consensus 87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s---Rr---~------~d~vwvaLAvlGi~lL~p-~~~~------------ 141 (292)
T COG5006 87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS---RR---L------RDFVWVALAVLGIWLLLP-LGQS------------ 141 (292)
T ss_pred HHHHHHHhccchhhhhhhhccHHHHHHHhc---cc---h------hhHHHHHHHHHHHHhhee-ccCC------------
Confidence 999999999999999999999998887753 11 1 366777888999998862 2222
Q ss_pred CCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccc
Q 017167 182 PDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAW 261 (376)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (376)
.+.....|..+++.++.||+.|.+..+|.-+.. +........+.++.+..+|+..... ..
T Consensus 142 ---------------~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~-~g~~g~a~gm~vAaviv~Pig~~~a-g~--- 201 (292)
T COG5006 142 ---------------VWSLDPVGVALALGAGACWALYIVLGQRAGRAE-HGTAGVAVGMLVAALIVLPIGAAQA-GP--- 201 (292)
T ss_pred ---------------cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccC-CCchHHHHHHHHHHHHHhhhhhhhc-ch---
Confidence 234557899999999999999999999987655 5677788889999999999887422 21
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhh---
Q 017167 262 IFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSIL--- 338 (376)
Q Consensus 262 ~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~--- 338 (376)
...+++-...-+..+++++.+.|.+-..++++.+....+.+..+||.++.+.|++++||.+|+.||+|.+.|+.+..
T Consensus 202 ~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~ 281 (292)
T COG5006 202 ALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGST 281 (292)
T ss_pred hhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccc
Confidence 12245666777889999999999999999999999999999999999999999999999999999999999987665
Q ss_pred hccccccc
Q 017167 339 LPNRWMST 346 (376)
Q Consensus 339 l~~~~~~~ 346 (376)
+..||+++
T Consensus 282 lt~~~~~~ 289 (292)
T COG5006 282 LTARKPAV 289 (292)
T ss_pred cccCCCCC
Confidence 44455443
No 15
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.88 E-value=2.7e-23 Score=184.55 Aligned_cols=290 Identities=17% Similarity=0.119 Sum_probs=221.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 017167 19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA 98 (376)
Q Consensus 19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 98 (376)
..+|..+.-++ ..+....+.++..++ .+|.+....|++.-.++..+..++++.....+ .....++++.|..| ..
T Consensus 36 p~~gl~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp--~g~R~~LiLRg~mG-~t 109 (346)
T KOG4510|consen 36 PNLGLLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVIGP--EGKRKWLILRGFMG-FT 109 (346)
T ss_pred CccCceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeeecC--CCcEEEEEeehhhh-hh
Confidence 35577777777 555555555555554 78999999998877777776665543222111 12226788899998 46
Q ss_pred HHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcc-cCCCCCC
Q 017167 99 NQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTI-YSPAPPL 177 (376)
Q Consensus 99 ~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~-~~~~~~~ 177 (376)
+....|||++|.+.+++++|.++.|+++.+++|+++|||.+. .+.++..+.+.||+++. ++++. +++.+++
T Consensus 110 gvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~------~eaL~s~itl~GVVLIv--RPpFlFG~~t~g~ 181 (346)
T KOG4510|consen 110 GVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTK------FEALGSLITLLGVVLIV--RPPFLFGDTTEGE 181 (346)
T ss_pred HHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcH------HHHHHHHHhhheEEEEe--cCCcccCCCcccc
Confidence 888899999999999999999999999999999999999999 79999999999999996 45442 2222222
Q ss_pred CCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcC
Q 017167 178 NQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERN 257 (376)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (376)
++++ ...+..|.+.++.+.+..+--.++.|+.-|+. |......|..+++.+..+......+
T Consensus 182 ~~s~----------------~~~~~~gt~aai~s~lf~asvyIilR~iGk~~-h~~msvsyf~~i~lV~s~I~~~~ig-- 242 (346)
T KOG4510|consen 182 DSSQ----------------VEYDIPGTVAAISSVLFGASVYIILRYIGKNA-HAIMSVSYFSLITLVVSLIGCASIG-- 242 (346)
T ss_pred cccc----------------ccccCCchHHHHHhHhhhhhHHHHHHHhhccc-cEEEEehHHHHHHHHHHHHHHhhcc--
Confidence 2111 12345677888888888777777788876776 5666666777777776655444222
Q ss_pred cccccc-cCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhh
Q 017167 258 LDAWIF-HNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARS 336 (376)
Q Consensus 258 ~~~~~~-~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~g 336 (376)
.+.. ....+|+..+.+|++ +.++|++...++|+..+..++++.+.+.+++.+++++++||.|+++.|+|+++|+.+
T Consensus 243 --~~~lP~cgkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS 319 (346)
T KOG4510|consen 243 --AVQLPHCGKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSS 319 (346)
T ss_pred --ceecCccccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehh
Confidence 2222 246788888999997 899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccc
Q 017167 337 ILLPNRWM 344 (376)
Q Consensus 337 i~l~~~~~ 344 (376)
.+++.+++
T Consensus 320 ~v~~a~~k 327 (346)
T KOG4510|consen 320 TVWVALKK 327 (346)
T ss_pred HHHHHHHH
Confidence 99875443
No 16
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.86 E-value=4.9e-20 Score=167.12 Aligned_cols=276 Identities=15% Similarity=0.121 Sum_probs=222.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhc-cCC--CCCHHHHHHHHHHHHH
Q 017167 18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKK-ERP--AMTLNFALQFILLALV 94 (376)
Q Consensus 18 ~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~-~~~--~~~~~~~~~~~~~g~~ 94 (376)
+..+|+++.+.+.++||..+.+.|.+. ..++.++...|.+.++.++..+....++. +.. ..+++.+..+.+.++.
T Consensus 4 ~~~~Gil~~l~Ay~lwG~lp~y~kll~--~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l 81 (293)
T COG2962 4 DSRKGILLALLAYLLWGLLPLYFKLLE--PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL 81 (293)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence 356799999999999999999999864 39999999999999999988877665432 111 2345666777777777
Q ss_pred HHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCC
Q 017167 95 GITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPA 174 (376)
Q Consensus 95 ~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~ 174 (376)
++.++..|.+|..+..+-++++=.+.+|++.++++.+++|||+++ .|++++.++.+||.......|+
T Consensus 82 -i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~------~Q~iAV~lA~~GV~~~~~~~g~------ 148 (293)
T COG2962 82 -IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSR------LQWIAVGLAAAGVLIQTWLLGS------ 148 (293)
T ss_pred -HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccH------HHHHHHHHHHHHHHHHHHHcCC------
Confidence 579999999999999999999999999999999999999999999 7999999999999998753332
Q ss_pred CCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHh
Q 017167 175 PPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIF 254 (376)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (376)
.. ..++.-+++|+.|....|+ . +. ++.+.....+..-....+......
T Consensus 149 ------------------------lp-----wval~la~sf~~Ygl~RK~-~-~v-~a~~g~~lE~l~l~p~al~yl~~l 196 (293)
T COG2962 149 ------------------------LP-----WVALALALSFGLYGLLRKK-L-KV-DALTGLTLETLLLLPVALIYLLFL 196 (293)
T ss_pred ------------------------Cc-----HHHHHHHHHHHHHHHHHHh-c-CC-chHHhHHHHHHHHhHHHHHHHHHH
Confidence 11 2346678899999997444 2 23 455555555555555555555544
Q ss_pred hcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhh
Q 017167 255 ERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPA 334 (376)
Q Consensus 255 ~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~ 334 (376)
+...+.....+...+..+...|.+ ++++..++..+.|+++-+..+.++|.+|..-.+++++++||+++..+++..++|.
T Consensus 197 ~~~~~~~~~~~~~~~~LLv~aG~v-TavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW 275 (293)
T COG2962 197 ADSGQFLQQNANSLWLLLVLAGLV-TAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIW 275 (293)
T ss_pred hcCchhhhcCCchHHHHHHHhhHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 433321121345677788888887 9999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcc
Q 017167 335 RSILLPN 341 (376)
Q Consensus 335 ~gi~l~~ 341 (376)
.|+++..
T Consensus 276 ~aL~l~~ 282 (293)
T COG2962 276 LALALFS 282 (293)
T ss_pred HHHHHHH
Confidence 9999864
No 17
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.86 E-value=2.9e-20 Score=175.40 Aligned_cols=272 Identities=12% Similarity=0.025 Sum_probs=205.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017167 22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG 101 (376)
Q Consensus 22 g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 101 (376)
++++.++++++||...+..|... +.++.++. |..++.+++..+....++++ +..++.+..-++.|.+ ...++.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~-w~ig~~ 74 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAF-WALGQI 74 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHH-HHhhhh
Confidence 46789999999999999999865 58887775 78888777766655533211 1224444444555555 578999
Q ss_pred HHHHhcccCCccceeeccc-chhHHHHHHHHHHhhccccccccCccce----eehHhHHHHhHhhhhhccCCcccCCCCC
Q 017167 102 FYLLGLENTSPTFASAIQN-SVPAITFLMAAIFRIEKVRLDRKDGIAK----VVGTLFCVAGATVITLYKGPTIYSPAPP 176 (376)
Q Consensus 102 ~~~~al~~~~~~~a~ii~~-~~Pl~~~lla~l~l~e~~~~~~~~~~~~----~igi~l~~~Gv~li~~~~~~~~~~~~~~ 176 (376)
+++.++++++.+.+..+.+ +.+++..+.+.+++|||.+.+ + ++|++++++|+.++...+++..
T Consensus 75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~~------ 142 (290)
T TIGR00776 75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKSA------ 142 (290)
T ss_pred hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEecccccc------
Confidence 9999999999999999988 888999999999999999884 7 9999999999988852211100
Q ss_pred CCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHH----HHHHHHHHHHH
Q 017167 177 LNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCF----FGLIQFMIIAA 252 (376)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 252 (376)
+ + +...+..+|++++++++++|+.|.+..|+. ++ ++....+.+.. .+.+...+. .
T Consensus 143 -----~-----------~-~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~-~ 201 (290)
T TIGR00776 143 -----G-----------I-KSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAIGMVIGGIIFNLGH-I 201 (290)
T ss_pred -----c-----------c-ccccchhhHHHHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHHHHHHHHHHHHHHH-h
Confidence 0 0 000233679999999999999999999875 35 57777444444 333333322 1
Q ss_pred HhhcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHh-cCCceeeeecchhHHHHHHHHHHHHhCCccccccc----
Q 017167 253 IFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCID-RGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGY---- 327 (376)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~-~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~---- 327 (376)
. . .++ +.+..+..+..|++ ..+++.+|..+.+ +.++++.+.+...+|+.+.+.+++++||+.++.|+
T Consensus 202 --~-~-~~~---~~~~~~~~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~ 273 (290)
T TIGR00776 202 --L-A-KPL---KKYAILLNILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAIS 273 (290)
T ss_pred --c-c-cch---HHHHHHHHHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhH
Confidence 1 0 111 23344444558888 8999999999999 99999999999999999999999999999999999
Q ss_pred cchhhhhhhhhhcc
Q 017167 328 VPATSPARSILLPN 341 (376)
Q Consensus 328 iG~~lI~~gi~l~~ 341 (376)
+|.++|+.|+.+..
T Consensus 274 iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 274 VGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998864
No 18
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.76 E-value=7.4e-18 Score=156.89 Aligned_cols=233 Identities=12% Similarity=0.116 Sum_probs=186.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhc
Q 017167 86 LQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLY 165 (376)
Q Consensus 86 ~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~ 165 (376)
...+....+. ++.+.++..|+++++++..+++.++..+|+..++.++.+||+++ .+++++.+++.|++++..+
T Consensus 160 k~sl~fc~lW-F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~------sKllav~~si~GViiVt~~ 232 (416)
T KOG2765|consen 160 KLSLFFCPLW-FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTL------SKLLAVFVSIAGVIIVTMG 232 (416)
T ss_pred HHHHHHHHHH-HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhH------HHHHHHHHhhccEEEEEec
Confidence 3345555665 57889999999999999999999999999999999999999999 6999999999999999854
Q ss_pred cCCcccCCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHH--
Q 017167 166 KGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFG-- 243 (376)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~-- 243 (376)
++.... + .......+|+++++++++.||.|.++.||...++.+.+.+..+.-++|
T Consensus 233 ~s~~~~---------------------~--~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLf 289 (416)
T KOG2765|consen 233 DSKQNS---------------------D--LPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLF 289 (416)
T ss_pred cccccc---------------------c--CCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHH
Confidence 322110 0 034556899999999999999999999987766522444444433333
Q ss_pred -HHHHHHHHHHhhc-CcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCc
Q 017167 244 -LIQFMIIAAIFER-NLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEE 321 (376)
Q Consensus 244 -~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~ 321 (376)
.+++.|...+.+. ..+.++.++..+...++..+.+++.++-++|.+|.-..+|..+++-+.++...+++.+.++-+..
T Consensus 290 nllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~ 369 (416)
T KOG2765|consen 290 NLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKH 369 (416)
T ss_pred HHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCC
Confidence 3333433333222 34455666777888889999999999999999999999999999999999999999999988999
Q ss_pred cccccccchhhhhhhhhhccccccccc
Q 017167 322 FYLGGYVPATSPARSILLPNRWMSTCM 348 (376)
Q Consensus 322 ~~~~~~iG~~lI~~gi~l~~~~~~~~~ 348 (376)
+++.+++|...|++|-+.++...+...
T Consensus 370 ~S~~~iiGsi~Ifv~Fv~vn~~~~~~~ 396 (416)
T KOG2765|consen 370 PSALYIIGSIPIFVGFVIVNISSENSK 396 (416)
T ss_pred CCHHHHHHHHHHHHHHhheeccccccc
Confidence 999999999999999999986544433
No 19
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.75 E-value=1.1e-16 Score=152.06 Aligned_cols=276 Identities=13% Similarity=0.124 Sum_probs=212.9
Q ss_pred HHHHHHHhc-CCC--chHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccc
Q 017167 38 VVSRAALNM-GIS--KLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTF 114 (376)
Q Consensus 38 ~~~k~~~~~-~~~--~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~ 114 (376)
+.-+..... +.. |..+++..+....+.........+ .++.++..++.++..+++. .++..+-+.|+++++...
T Consensus 17 ~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~ 92 (303)
T PF08449_consen 17 ILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK---FPKSRKIPLKKYAILSFLF-FLASVLSNAALKYISYPT 92 (303)
T ss_pred HHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc---ccCCCcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHH
Confidence 444444432 344 788999999998887776665433 1223445556677777775 688899999999999999
Q ss_pred eeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCCCCCcchhhhcccc
Q 017167 115 ASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLG 194 (376)
Q Consensus 115 a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (376)
-.++.++.|+++.+++.+++|+|.++ .++.++++..+|+.+....+....+. ++.
T Consensus 93 ~~~~ks~~~i~vmi~~~l~~~k~y~~------~~~~~v~li~~Gv~~~~~~~~~~~~~--------~~~----------- 147 (303)
T PF08449_consen 93 QIVFKSSKPIPVMILGVLILGKRYSR------RQYLSVLLITIGVAIFTLSDSSSSSS--------SNS----------- 147 (303)
T ss_pred HHHHhhhHHHHHHHHHHHhcCccccH------HHHHHHHHHHhhHheeeecccccccc--------ccc-----------
Confidence 99999999999999999999999999 59999999999999997533221110 000
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHH--hhcCccc--ccccCCchh
Q 017167 195 DAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAI--FERNLDA--WIFHNGGEV 269 (376)
Q Consensus 195 ~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~ 269 (376)
.......|+++.+++.++.+...++++|..++++ ++.+..++...++.+...+.... .++..+. +...++..+
T Consensus 148 --~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~ 225 (303)
T PF08449_consen 148 --SSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVL 225 (303)
T ss_pred --ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHH
Confidence 1122344999999999999999999999998776 66788899999998888777765 2222111 112234455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcccccc
Q 017167 270 FSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWMS 345 (376)
Q Consensus 270 ~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~~~ 345 (376)
..++...+. ..+++.+.+...++.++...+++..++-+++++++++++|+++++.+|+|.++++.|..+....++
T Consensus 226 ~~l~~~s~~-~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~ 300 (303)
T PF08449_consen 226 LYLLLFSLT-GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKK 300 (303)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhc
Confidence 555555554 788888899999999999999999999999999999999999999999999999999999865443
No 20
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.65 E-value=5.1e-16 Score=145.75 Aligned_cols=286 Identities=13% Similarity=0.066 Sum_probs=222.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc--CCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017167 24 LAMVALQFGYAGFHVVSRAALNM--GISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG 101 (376)
Q Consensus 24 ~~~lla~~~~g~~~~~~k~~~~~--~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 101 (376)
.+....-++-.......|+.++. .--|..++..+...+.+.+......+..+..+..++..+...+.+|++. +++..
T Consensus 20 ~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v 98 (316)
T KOG1441|consen 20 IAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHV 98 (316)
T ss_pred HHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHH
Confidence 33444444445566788888883 3347888888777777777666655433333333456788889999996 78999
Q ss_pred HHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCC
Q 017167 102 FYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQ 181 (376)
Q Consensus 102 ~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~ 181 (376)
+-..|+.+.+++..+.+..+.|++++++++++.+|+.++ ..+..++..+.|+.+.+. +
T Consensus 99 ~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~------~~~lsL~piv~GV~ias~--~-------------- 156 (316)
T KOG1441|consen 99 LGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSS------MTYLSLLPIVFGVAIASV--T-------------- 156 (316)
T ss_pred hcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcc------eEEEEEEEeeeeEEEeee--c--------------
Confidence 999999999999999999999999999999999999999 588999999999998873 1
Q ss_pred CCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhh--hCC-CcchhHHHHHHHHHHHHH-HHHHHhhcC
Q 017167 182 PDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLK--KYP-ARLSVTAYTCFFGLIQFM-IIAAIFERN 257 (376)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 257 (376)
+.+-+..|...++.+.+..+..+++.++..+ +++ ++.+...++.-.+.+.++ |+....+++
T Consensus 157 ---------------e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~ 221 (316)
T KOG1441|consen 157 ---------------ELSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGN 221 (316)
T ss_pred ---------------cccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhccc
Confidence 2334578999999999999999999999984 333 789999999999999888 877765543
Q ss_pred cc---cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhh
Q 017167 258 LD---AWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPA 334 (376)
Q Consensus 258 ~~---~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~ 334 (376)
.. .....+.. ...+++..+ +...-....+..+.+.+|..-++.+.+.-++.++.++++|+|+.++.+..|.++.+
T Consensus 222 ~~~~~~~~~~~~~-~~~~~~~sv-~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai 299 (316)
T KOG1441|consen 222 KFVGFLTAPWFVT-FLILLLNSV-LAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAI 299 (316)
T ss_pred ceeeeeccccchh-hHHHHHHHH-HHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHH
Confidence 22 11111112 333344443 35555666789999999999999999999999999999999999999999999999
Q ss_pred hhhhhccccccccch
Q 017167 335 RSILLPNRWMSTCML 349 (376)
Q Consensus 335 ~gi~l~~~~~~~~~~ 349 (376)
.|++++++-+.+.|+
T Consensus 300 ~Gv~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 300 LGVFLYSRAKLKEKK 314 (316)
T ss_pred HHHHHHHHHhhhhhc
Confidence 999999876555443
No 21
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.59 E-value=1e-14 Score=116.35 Aligned_cols=134 Identities=16% Similarity=0.222 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCC-CCCHHHHHHHHHHHHHHHHHHH
Q 017167 22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERP-AMTLNFALQFILLALVGITANQ 100 (376)
Q Consensus 22 g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~ 100 (376)
..+++++++++||...++.|...| ++||..-++.|.+...+++..++...++.+.. ..++|.|....+.|+.+ .+++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-glsw 81 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLSW 81 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHHH
Confidence 568999999999999999999999 69999999999999999988888776543322 35778888778888665 8999
Q ss_pred HHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167 101 GFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (376)
Q Consensus 101 ~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~ 163 (376)
.+||.|++..+++....+..+.|+++++++++++|||++. .+++|+++.++|+++++
T Consensus 82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~------~~~iG~~LI~~Gailvs 138 (140)
T COG2510 82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSL------PTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCH------HHHHHHHHHHhCeeeEe
Confidence 9999999999999999999999999999999999999999 59999999999999875
No 22
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.56 E-value=7.1e-14 Score=111.52 Aligned_cols=137 Identities=14% Similarity=0.131 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHH
Q 017167 204 GCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIA 283 (376)
Q Consensus 204 G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~ 283 (376)
..++++++++++++..++.|-.+++. ||...++.+.......+..+....+ +.+.....+++.|..+...|+ +++++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g-~~~~~~~~~~k~~lflilSGl-a~gls 80 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTG-NWQAGGEIGPKSWLFLILSGL-AGGLS 80 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcC-ceecccccCcceehhhhHHHH-HHHHH
Confidence 45789999999999999999999888 7889999999988888777776543 333332347788999999996 59999
Q ss_pred HHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcccc
Q 017167 284 FAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRW 343 (376)
Q Consensus 284 ~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~ 343 (376)
..+|++++|..+++++..+..++|+++++++++++||+++..+++|..+|..|++++.++
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~~ 140 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSLR 140 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEecC
Confidence 999999999999999999999999999999999999999999999999999999988654
No 23
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.50 E-value=6.5e-13 Score=121.88 Aligned_cols=231 Identities=12% Similarity=0.090 Sum_probs=169.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHh
Q 017167 81 TLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGAT 160 (376)
Q Consensus 81 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~ 160 (376)
++++.+++.+=+++- .+.+.+.+.++++++++.-+++..+..++|++++++++|+|++. .+|+++.+.++|+.
T Consensus 13 ~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~------~qW~aL~lL~~Gv~ 85 (244)
T PF04142_consen 13 SPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSR------RQWLALFLLVAGVV 85 (244)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccch------hhHHHHHHHHHHHh
Confidence 456677777777774 78999999999999999999999999999999999999999999 59999999999999
Q ss_pred hhhhccCCcccCCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcc-hhHHHH
Q 017167 161 VITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARL-SVTAYT 239 (376)
Q Consensus 161 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~-~~~~~~ 239 (376)
++-...... .+.++.+..++.. ...+...|+++.+.++++.++..++.+|.+|+.+.+. ..+...
T Consensus 86 lv~~~~~~~-~~~~~~~~~~~~~-------------~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL 151 (244)
T PF04142_consen 86 LVQLSSSQS-SDNSSSSSVHHDA-------------SNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQL 151 (244)
T ss_pred eeecCCccc-ccccccccccccc-------------ccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHH
Confidence 986322111 1110011000000 2345678999999999999999999999998875333 334444
Q ss_pred HHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhC
Q 017167 240 CFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALG 319 (376)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~ 319 (376)
...|.+..++...+.+.. ...+....+.+-...+.-++..+++-++....+|+.+...=+.....+.+++.+++++++|
T Consensus 152 ~~~gi~~~~~~~~~~~~~-~~~~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~ 230 (244)
T PF04142_consen 152 YLFGILFNLLALLLSDGS-AISESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFG 230 (244)
T ss_pred HHHHHHHHHHHHhccccc-ccccCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 555555555544432221 1111111122333344455557777788889999999999999999999999999999999
Q ss_pred Cccccccccchhhh
Q 017167 320 EEFYLGGYVPATSP 333 (376)
Q Consensus 320 e~~~~~~~iG~~lI 333 (376)
.+++....+|..++
T Consensus 231 ~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 231 FPPSLSFLLGAALV 244 (244)
T ss_pred CCCchHHhhheecC
Confidence 99999999998764
No 24
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.49 E-value=6.3e-13 Score=116.72 Aligned_cols=255 Identities=8% Similarity=0.048 Sum_probs=195.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHH
Q 017167 51 LVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMA 130 (376)
Q Consensus 51 ~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla 130 (376)
..++++++....++.=.+..++++ . +.++..-+.+...++- ..+..+.-..|++++|-.+..+-.++.|+-+.+++
T Consensus 54 laLVf~qC~~N~vfAkvl~~ir~~-~--~~D~t~~~~YaAcs~s-YLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilG 129 (337)
T KOG1580|consen 54 LALVFFQCTANTVFAKVLFLIRKK-T--EIDNTPTKMYAACSAS-YLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILG 129 (337)
T ss_pred HHHHHHHHHHHHHHHHhheeeccc-c--cccCCcchHHHHHHHH-HHHHHHhccchhcccCCcHHHhcccCCCcceeeee
Confidence 345566666555544333323221 1 1222222334444433 35677777899999999999999999999999999
Q ss_pred HHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHH
Q 017167 131 AIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIG 210 (376)
Q Consensus 131 ~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~ 210 (376)
.++.+++-+| ++...+++.++|+.+.++..+.-.+. .+.....|.++.++
T Consensus 130 Vl~~~KsY~w------~kY~cVL~IV~GValFmYK~~Kv~g~------------------------e~~t~g~GElLL~l 179 (337)
T KOG1580|consen 130 VLFAHKSYHW------RKYCCVLMIVVGVALFMYKENKVGGA------------------------EDKTFGFGELLLIL 179 (337)
T ss_pred hhhhcccccH------HHHHHHHHHHHHHHHhhccccccCCC------------------------cccccchHHHHHHH
Confidence 9999888888 59999999999999997432322111 44667899999999
Q ss_pred HHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHHhhcCcc--cccccCCchhHHHHHHHHHHHHHHHHHH
Q 017167 211 HCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAIFERNLD--AWIFHNGGEVFSILYAGVVASGIAFAVQ 287 (376)
Q Consensus 211 a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~g~~~~~~~~~l~ 287 (376)
+--.-++....+.+..+.+. ....++++.++.+.+.+....+++++-++ -+....+..|+-+...++. +++++.+.
T Consensus 180 SL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~-s~LGQ~fI 258 (337)
T KOG1580|consen 180 SLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIA-SCLGQWFI 258 (337)
T ss_pred HHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHH-HHhhhHHH
Confidence 99999999999988766553 56688899999999888766665543222 2234467788888888885 99999999
Q ss_pred HHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhc
Q 017167 288 IWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLP 340 (376)
Q Consensus 288 ~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~ 340 (376)
+.-+.+.+|..-|++....-.++++.++++++++++.+||+|..++..+...=
T Consensus 259 F~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 259 FKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD 311 (337)
T ss_pred HHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence 99999999999999999999999999999999999999999999999988763
No 25
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.45 E-value=1.2e-13 Score=113.02 Aligned_cols=125 Identities=24% Similarity=0.386 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 017167 31 FGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENT 110 (376)
Q Consensus 31 ~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~ 110 (376)
++||...++.|...++ .||....++|+..+.+ +.++....+++.....+++++......|+++..+++.+++++++++
T Consensus 1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI 78 (126)
T ss_pred ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence 4799999999999985 9999999999999998 6666655544444567788888899999987789999999999999
Q ss_pred CccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167 111 SPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (376)
Q Consensus 111 ~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~ 163 (376)
++++++.+.+++|+++.+++++++||++++ .+++|+++++.|+.++.
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~------~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSW------RQIIGIILIIIGVVLIS 125 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCH------HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 59999999999999874
No 26
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.45 E-value=2.5e-14 Score=126.90 Aligned_cols=300 Identities=16% Similarity=0.123 Sum_probs=224.3
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHH
Q 017167 16 VPEKLQLHLAMVALQFGYAGFHVVSRAALNMGIS-KLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALV 94 (376)
Q Consensus 16 ~~~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~-~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 94 (376)
.++.+.++.+.=+-..+-......+....+.|++ |..-.|..+..-+++-.++..+++ +. -...|..+++++++
T Consensus 13 tkk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~-~~----~~~~~~hYilla~~ 87 (336)
T KOG2766|consen 13 TKKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR-KY----IKAKWRHYILLAFV 87 (336)
T ss_pred chhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh-HH----HHHHHHHhhheeEE
Confidence 4555666666555556666666677777766655 666688888888888888887754 21 22345558888888
Q ss_pred HHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCC
Q 017167 95 GITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPA 174 (376)
Q Consensus 95 ~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~ 174 (376)
. .-++.+...|.++++.+.+.++-.-.-+...+++|+++|.|-++ .++.|+++|++|++++...+-+..+.
T Consensus 88 D-VEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrl------mki~gV~iCi~GvvmvV~sDV~agd~-- 158 (336)
T KOG2766|consen 88 D-VEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRL------MKISGVVICIVGVVMVVFSDVHAGDR-- 158 (336)
T ss_pred e-ecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhh------heeeeEEeEecceEEEEEeeeccccc--
Confidence 6 46787889999999999999998888888999999999999999 79999999999999997433222111
Q ss_pred CCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHh
Q 017167 175 PPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIF 254 (376)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (376)
++.++..+||++.+.++-+||+.++..+.+.|+. +..+.....-++|++...+... .
T Consensus 159 ---------------------aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~-d~~elm~~lgLfGaIIsaIQ~i-~ 215 (336)
T KOG2766|consen 159 ---------------------AGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA-DRVELMGFLGLFGAIISAIQFI-F 215 (336)
T ss_pred ---------------------cCCCCCccCcEEEEecceeeeeccccHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHh-h
Confidence 1456678999999999999999999999999888 5788888888999998888744 3
Q ss_pred hcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhh
Q 017167 255 ERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPA 334 (376)
Q Consensus 255 ~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~ 334 (376)
+.. ......+..+....+. ..++..+-|.+.-.-+|..+++..++-...+-.++++. ..||-+.+|...+..+.+.
T Consensus 216 ~~~-~~~tl~w~~~i~~yl~-f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~ 291 (336)
T KOG2766|consen 216 ERH-HVSTLHWDSAIFLYLR-FALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIA 291 (336)
T ss_pred hcc-ceeeEeehHHHHHHHH-HHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHH
Confidence 322 1111112122222222 33345555666667788889999999999999999998 6788889999999999999
Q ss_pred hhhhhccccccccchhhHHHHH
Q 017167 335 RSILLPNRWMSTCMLSFWIQMF 356 (376)
Q Consensus 335 ~gi~l~~~~~~~~~~~~~~~~~ 356 (376)
.|.+++.-|.+..+-+.-+|+.
T Consensus 292 ~GliiYs~re~~~~e~r~~~v~ 313 (336)
T KOG2766|consen 292 TGLIIYSTREKDEEELRKGQVV 313 (336)
T ss_pred HhhEEeeccccCcHhhccCccc
Confidence 9999997666665555556654
No 27
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.44 E-value=5.9e-11 Score=111.18 Aligned_cols=298 Identities=13% Similarity=0.083 Sum_probs=215.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC---CCchHHHHHHHHHHHHHHHHHHHhhhhc----cCC------CCCHHHHHH
Q 017167 21 QLHLAMVALQFGYAGFHVVSRAALNMG---ISKLVFPVYRNIIAFLLLLPFAYFLEKK----ERP------AMTLNFALQ 87 (376)
Q Consensus 21 ~g~~~~lla~~~~g~~~~~~k~~~~~~---~~~~~~~~~r~~~a~l~l~~~~~~~~~~----~~~------~~~~~~~~~ 87 (376)
.-.+.++...+.++...+..|+....+ +.|...++.--++-.++....++...++ ..+ ...+++..+
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 566778888999999999999987665 6677777777777776666666554211 111 113334455
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccC
Q 017167 88 FILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKG 167 (376)
Q Consensus 88 ~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~ 167 (376)
..+=+++ .++.+.++|.++.+++++.-++...+--+.|+++..+++++|+++ .+|.+.++..+|+.++-....
T Consensus 95 ~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~------~Qw~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 95 VSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSR------LQWMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhH------HHHHHHHHHHHHHHHHhccCC
Confidence 5555556 467888999999999999999999999999999999999999999 599999999999999962222
Q ss_pred CcccCCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHH-HHHHHHHH
Q 017167 168 PTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAY-TCFFGLIQ 246 (376)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~ 246 (376)
+..+.. . ++ ...+...|....+.+++.-+...++-+|.+|+-+.+.-+... ..++|.+.
T Consensus 168 ~~~~a~--~-----~~-------------~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f 227 (345)
T KOG2234|consen 168 SPTGAK--S-----ES-------------SAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILF 227 (345)
T ss_pred CCCCcc--C-----CC-------------cccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence 111100 0 00 345567899999999999999999999999776544433333 34444444
Q ss_pred HHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCcccccc
Q 017167 247 FMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGG 326 (376)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~ 326 (376)
.+......+.....|. .-...|-...+.-++..+.+-++....+|+.+-..=+....+..+++.+.++.++|-.||...
T Consensus 228 ~~l~~~~~d~~~i~~~-gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F 306 (345)
T KOG2234|consen 228 NLLTILLQDGEAINEY-GFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYF 306 (345)
T ss_pred HHHHHhhccccccccC-CccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHH
Confidence 4443333322222111 112334445555566677777778888888887777777788999999999999999999999
Q ss_pred ccchhhhhhhhhhccccccc
Q 017167 327 YVPATSPARSILLPNRWMST 346 (376)
Q Consensus 327 ~iG~~lI~~gi~l~~~~~~~ 346 (376)
.+|..+++.++.+++..+.+
T Consensus 307 ~lG~~lVi~Si~lY~~~P~~ 326 (345)
T KOG2234|consen 307 LLGALLVILSIFLYSLYPAR 326 (345)
T ss_pred HHHHHHHHHHHHHhhcCCcc
Confidence 99999999999999854443
No 28
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.36 E-value=6.9e-13 Score=108.43 Aligned_cols=124 Identities=19% Similarity=0.315 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHh
Q 017167 213 LSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCID 292 (376)
Q Consensus 213 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~ 292 (376)
++||.+.+..|+..++. ++.....+++..+.+ .++...+.+... ....+..++...++.+.+++.+++.+++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 46899999999999887 699999999999998 666665544322 22335677888888898888999999999999
Q ss_pred cCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhc
Q 017167 293 RGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLP 340 (376)
Q Consensus 293 ~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~ 340 (376)
+.++++++.+.+++|+++.++++++++|++++.+++|..+++.|+++.
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999875
No 29
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.32 E-value=3e-11 Score=110.31 Aligned_cols=259 Identities=14% Similarity=0.139 Sum_probs=206.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHH
Q 017167 49 SKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFL 128 (376)
Q Consensus 49 ~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~l 128 (376)
++..+.+.+-+.+.++-...+ ..++.. ...++.|+.+...++.+ .++..+.+.|++|++-..-.+--++--+-+.+
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l--~~~k~~-~~~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml 125 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAML--KWWKKE-LSGVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVML 125 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHH--hccccc-CCCCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence 566778888888777664333 222222 33456778888888887 68999999999999988888888888888899
Q ss_pred HHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHH
Q 017167 129 MAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYL 208 (376)
Q Consensus 129 la~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~ 208 (376)
++.++.|.|.+. .+.+...+.-.|+.+.++.+.+... ..+...+...|+.++
T Consensus 126 mg~Lvy~~ky~~------~eYl~~~LIs~GvsiF~l~~~s~s~----------------------~~~g~~ns~~G~~Ll 177 (327)
T KOG1581|consen 126 MGTLVYGRKYSS------FEYLVAFLISLGVSIFSLFPNSDSS----------------------SKSGRENSPIGILLL 177 (327)
T ss_pred HHHHHhcCccCc------HHHHHHHHHHhheeeEEEecCCCCc----------------------cccCCCCchHhHHHH
Confidence 999999999999 5999999999999999754322110 001345678999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHHhhcC--cccccccCCchhHHHHHHHHHHHHHHHH
Q 017167 209 IGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAIFERN--LDAWIFHNGGEVFSILYAGVVASGIAFA 285 (376)
Q Consensus 209 l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ll~~g~~~~~~~~~ 285 (376)
...-+.-+..+..+.++.++++ .+..+.++.++++++......+..+.. ..++...+++.++-++....+ ++++|.
T Consensus 178 ~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~-gavGQ~ 256 (327)
T KOG1581|consen 178 FGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTC-GAVGQL 256 (327)
T ss_pred HHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHh-hhhhhh
Confidence 9999999999999999998776 678889999999888877764432221 112223466778888888885 899999
Q ss_pred HHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhc
Q 017167 286 VQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLP 340 (376)
Q Consensus 286 l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~ 340 (376)
+.++-+++.|+...+.++..+-++++.++.+.+|.+.+..|++|..+++.|+.+-
T Consensus 257 FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~ 311 (327)
T KOG1581|consen 257 FIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLE 311 (327)
T ss_pred eehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999884
No 30
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.25 E-value=1.9e-09 Score=99.76 Aligned_cols=279 Identities=11% Similarity=0.094 Sum_probs=209.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHH--HHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017167 23 HLAMVALQFGYAGFHVVSRAALNMGISKLVFPV--YRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQ 100 (376)
Q Consensus 23 ~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~--~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 100 (376)
....+.-.+.--...+..|.+...+--|..+.. ++.+.+.+.+...-.. +--+.++++++..++.+...++- ....
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~-~lv~~~~l~~~~~kk~~P~~~lf-~~~i 91 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL-GLVNFRPLDLRTAKKWFPVSLLF-VGML 91 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh-ceeecCCcChHHHHHHccHHHHH-HHHH
Confidence 333444444444566788888876433555555 7888777665555433 22345567888888888888874 5677
Q ss_pred HHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCC
Q 017167 101 GFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQI 180 (376)
Q Consensus 101 ~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~ 180 (376)
.+-..+++++++..-+++-...|+++++...+++|.|.+. ..+.++....+|...... .
T Consensus 92 ~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~------~v~~Sv~~m~~~s~~~~~--~------------- 150 (314)
T KOG1444|consen 92 FTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSN------KVWASVFAMIIGSVAAAF--T------------- 150 (314)
T ss_pred HHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchh------hHHHHHHHHHHHHHhhcc--c-------------
Confidence 7788899999999999999999999999999999977777 588888888877776652 1
Q ss_pred CCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHHhhcCc-
Q 017167 181 QPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAIFERNL- 258 (376)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 258 (376)
+......|+.+++...++-+.+.+..|+..+..+ +.....++..+.....+.....++++-.
T Consensus 151 ----------------d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~ 214 (314)
T KOG1444|consen 151 ----------------DLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDA 214 (314)
T ss_pred ----------------cceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHH
Confidence 1122345999999999999999999998776544 5678889999999888888777665411
Q ss_pred ---ccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhh
Q 017167 259 ---DAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPAR 335 (376)
Q Consensus 259 ---~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~ 335 (376)
......+...+..+...++++.++.|. -..+.+..++...+++....-..+.+...++.|++.++...+|..+-+.
T Consensus 215 l~~~~~~~~~~~~~~~~~lScv~gf~isy~-s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ 293 (314)
T KOG1444|consen 215 LSLNFDNWSDSSVLVVMLLSCVMGFGISYT-SFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFF 293 (314)
T ss_pred HHhhcccccchhHHHHHHHHHHHHHHHHHH-HHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhh
Confidence 110122345577788888886666655 5599999999999999988888888888888899999999999999888
Q ss_pred hhhhcc
Q 017167 336 SILLPN 341 (376)
Q Consensus 336 gi~l~~ 341 (376)
|-++++
T Consensus 294 ggv~Y~ 299 (314)
T KOG1444|consen 294 GGVLYS 299 (314)
T ss_pred hhhHHh
Confidence 877764
No 31
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.22 E-value=1.1e-10 Score=108.25 Aligned_cols=134 Identities=21% Similarity=0.258 Sum_probs=114.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCch--HHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHH
Q 017167 18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKL--VFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVG 95 (376)
Q Consensus 18 ~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~--~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 95 (376)
...+|.+++++++++|+...+..|...++ .++. ....+++.++.+++.++.+..++. ...+.+.+...+..++++
T Consensus 125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 201 (260)
T TIGR00950 125 INPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIG 201 (260)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHH
Confidence 34679999999999999999999998874 6644 455578999998888887654322 234667777888899988
Q ss_pred HHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHh
Q 017167 96 ITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGAT 160 (376)
Q Consensus 96 ~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~ 160 (376)
..+++.++++++++.++++++.+.++.|+++++++++++||+++. .+++|+.+.+.|++
T Consensus 202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~------~~~~G~~li~~g~~ 260 (260)
T TIGR00950 202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSL------PQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHhcC
Confidence 889999999999999999999999999999999999999999999 59999999998863
No 32
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.13 E-value=1.3e-08 Score=93.25 Aligned_cols=252 Identities=17% Similarity=0.190 Sum_probs=183.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhhcc---CCCCCHHH-HHHHHHHHHHHHHHHHHHHHHhcccCCccceeecccchhHH
Q 017167 50 KLVFPVYRNIIAFLLLLPFAYFLEKKE---RPAMTLNF-ALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAI 125 (376)
Q Consensus 50 ~~~~~~~r~~~a~l~l~~~~~~~~~~~---~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~ 125 (376)
|...+..+..+-+++.......++++. +-..+|++ .++....|+.. +..-.+-.+++++++.+.-++..++.++|
T Consensus 45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~yVtlSlYTM~KSSsi~F 123 (349)
T KOG1443|consen 45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-ALDIGLSNWSLEYVTLSLYTMTKSSSILF 123 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-hcccccccceeeeeeeeeeeeccccHHHH
Confidence 777788888777666555554443322 22455554 45566666665 67778888999999999999999999999
Q ss_pred HHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCCCCCcchhhhccccCCCCCchhhHH
Q 017167 126 TFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGC 205 (376)
Q Consensus 126 ~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 205 (376)
+.+++.++.-||+++ .-..-+.+.-+|+.+.+ +++ ..-+..|.
T Consensus 124 IllFs~if~lEk~~w------~L~l~v~lI~~Glflft-~Ks------------------------------Tqf~i~Gf 166 (349)
T KOG1443|consen 124 ILLFSLIFKLEKFRW------ALVLIVLLIAVGLFLFT-YKS------------------------------TQFNIEGF 166 (349)
T ss_pred HHHHHHHHHhHHHHH------HHHHHHHHHhhheeEEE-ecc------------------------------cceeehhH
Confidence 999999999999999 34555555666666665 332 12346799
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhCC----CcchhHHHHHHHHHHHHHHHHHHhhcCccc-----ccccCCc-hhHHHHHH
Q 017167 206 VYLIGHCLSWSGWLVMQAPVLKKYP----ARLSVTAYTCFFGLIQFMIIAAIFERNLDA-----WIFHNGG-EVFSILYA 275 (376)
Q Consensus 206 ~l~l~a~~~~a~~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~ll~~ 275 (376)
++.+.++++-++-..+.+.++++.+ +|....+...-.-.+.++|..+.+|+.... +...+.. .+..+...
T Consensus 167 ~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i 246 (349)
T KOG1443|consen 167 FLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLI 246 (349)
T ss_pred HHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHH
Confidence 9999999999998888888888765 678888887777777888887777653221 1111222 22222222
Q ss_pred HHHHHHHHHHH---HHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhc
Q 017167 276 GVVASGIAFAV---QIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLP 340 (376)
Q Consensus 276 g~~~~~~~~~l---~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~ 340 (376)
+. ++..++.+ -+.-+.+.+....++..-..-+-+.+++.++.+|.++...|+|..+...|+.+.
T Consensus 247 ~l-~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 247 SL-GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HH-HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 22 23333333 345677888889999999999999999999999999999999999999999998
No 33
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.12 E-value=6.9e-09 Score=95.34 Aligned_cols=221 Identities=11% Similarity=0.060 Sum_probs=158.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCccceeeccc-chhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHh
Q 017167 82 LNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQN-SVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGAT 160 (376)
Q Consensus 82 ~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~-~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~ 160 (376)
.+.+...++.|++. .+++...+.++++.+++++-++.. .+-+.+.+.+.++++|--+.+++. ...+++++.++|+.
T Consensus 42 ~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~--~G~~Al~liiiGv~ 118 (269)
T PF06800_consen 42 GTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKI--IGFLALVLIIIGVI 118 (269)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHH--HHHHHHHHHHHHHH
Confidence 47778888888886 799999999999999999999965 777789999999999987764221 34458888899998
Q ss_pred hhhhccCCcccCCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHH
Q 017167 161 VITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTC 240 (376)
Q Consensus 161 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~ 240 (376)
+.+..+++..+. + +..+...|+...+++++.|..|.+..|.. +. ++.....-+.
T Consensus 119 lts~~~~~~~~~----------~-------------~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~~-~~~~~~lPqa 172 (269)
T PF06800_consen 119 LTSYQDKKSDKS----------S-------------SKSNMKKGILALLISTIGYWIYSVIPKAF--HV-SGWSAFLPQA 172 (269)
T ss_pred Hhcccccccccc----------c-------------cccchhhHHHHHHHHHHHHHHHHHHHHhc--CC-ChhHhHHHHH
Confidence 887432221100 0 23456789999999999999999996652 33 4555444332
Q ss_pred HHHHHHH-HHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhC
Q 017167 241 FFGLIQF-MIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALG 319 (376)
Q Consensus 241 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~ 319 (376)
.|.+.. ..+....+ ...+ + +.-+.-+..|++ -.++..++..+.++.+.+..=.+..+.++++.+.+.+++|
T Consensus 173 -iGm~i~a~i~~~~~~--~~~~---~-k~~~~nil~G~~-w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~ 244 (269)
T PF06800_consen 173 -IGMLIGAFIFNLFSK--KPFF---E-KKSWKNILTGLI-WGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILK 244 (269)
T ss_pred -HHHHHHHHHHhhccc--cccc---c-cchHHhhHHHHH-HHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEE
Confidence 233222 22222111 1111 2 223333556665 7888999999999999999999999999999999999999
Q ss_pred Cccccccc----cchhhhhhhhhh
Q 017167 320 EEFYLGGY----VPATSPARSILL 339 (376)
Q Consensus 320 e~~~~~~~----iG~~lI~~gi~l 339 (376)
|+=+..++ +|..+++.|.++
T Consensus 245 E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 245 EKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred ecCchhhHHHHHHHHHHHHHhhhc
Confidence 99776644 688888877765
No 34
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.04 E-value=2.7e-09 Score=100.39 Aligned_cols=133 Identities=16% Similarity=0.153 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHHH
Q 017167 205 CVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAF 284 (376)
Q Consensus 205 ~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~ 284 (376)
.++.++++++++...+..|+..++.+ + ...+.+..+.+.+.|+..... ....+...+ ..++.....+.++....+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~--~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEP-D--FLWWALLAHSVLLTPYGLWYL-AQVGWSRLP-ATFWLLLAISAVANMVYF 77 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchh-H--HHHHHHHHHHHHHHHHHHHhc-ccCCCCCcc-hhhHHHHHHHHHHHHHHH
Confidence 46789999999999999998776642 3 346666666667777665321 112233222 334434444555688999
Q ss_pred HHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccc
Q 017167 285 AVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNR 342 (376)
Q Consensus 285 ~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~ 342 (376)
.++++++++.+++.++++.+.+|+++.+++++++||+++..+++|..+++.|+++...
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999988654
No 35
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.03 E-value=3.2e-09 Score=100.55 Aligned_cols=137 Identities=13% Similarity=0.103 Sum_probs=112.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 017167 19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA 98 (376)
Q Consensus 19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 98 (376)
...|.++.++++++|+.+.+..|...++ .++..... -.+++.+++.++...... ....+...+...+..|+++..+
T Consensus 146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~~-~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~ 221 (293)
T PRK10532 146 DLTGAALALGAGACWAIYILSGQRAGAE-HGPATVAI-GSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTAL 221 (293)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHH-HHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHH
Confidence 3569999999999999999999998764 77776644 445566666666544221 1224555566667899998899
Q ss_pred HHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhc
Q 017167 99 NQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLY 165 (376)
Q Consensus 99 ~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~ 165 (376)
++.++++++++.++++++++.+++|+++.++++++++|+++. .+++|.++.+.|++.....
T Consensus 222 ~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~------~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 222 PYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTL------IQWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcH------HHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999 6999999999999998643
No 36
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.01 E-value=4.1e-10 Score=91.18 Aligned_cols=103 Identities=20% Similarity=0.308 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhc-c-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHH
Q 017167 55 VYRNIIAFLLLLPFAYFLEKK-E-RPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAI 132 (376)
Q Consensus 55 ~~r~~~a~l~l~~~~~~~~~~-~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l 132 (376)
.+|+..+.+++..+...+++. + .+..+++.+.+....|.++...++.++++|+++.+ +.++++.++.|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 579999999988888774432 1 12334455677778888876689999999999999 58889999999999999999
Q ss_pred HhhccccccccCccceeehHhHHHHhHhhhhh
Q 017167 133 FRIEKVRLDRKDGIAKVVGTLFCVAGATVITL 164 (376)
Q Consensus 133 ~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~ 164 (376)
++|||+++ .++.++.++++|+.++..
T Consensus 81 ~~~er~~~------~~~~a~~l~~~Gv~li~~ 106 (113)
T PF13536_consen 81 FFKERLSP------RRWLAILLILIGVILIAW 106 (113)
T ss_pred HhcCCCCH------HHHHHHHHHHHHHHHHhh
Confidence 99999999 499999999999999973
No 37
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.99 E-value=4e-09 Score=99.80 Aligned_cols=137 Identities=16% Similarity=0.074 Sum_probs=115.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 017167 19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA 98 (376)
Q Consensus 19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 98 (376)
...|.++.++++++|+...+..|...+ -++.....++..++.+.+.++............+.+.+...+..++++..+
T Consensus 148 ~~~G~l~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~ 225 (292)
T PRK11272 148 NPWGAILILIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSII 225 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 356999999999999999999998643 235566788888888887777654322111123567788889999998889
Q ss_pred HHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167 99 NQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (376)
Q Consensus 99 ~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~ 163 (376)
++.+|++++++.++++++++.+++|+++++++++++||+++. .+++|.++.+.|+.+..
T Consensus 226 ~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~------~~iiG~~lIi~gv~~~~ 284 (292)
T PRK11272 226 AISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSP------IEWLALGVIVFAVVLVT 284 (292)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcH------HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 69999999999999886
No 38
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.98 E-value=3.3e-09 Score=90.26 Aligned_cols=137 Identities=17% Similarity=0.205 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhC-----C-CcchhHHHHHHHHHHHHHHHHHHhhcCcccccc----c-----CCch
Q 017167 204 GCVYLIGHCLSWSGWLVMQAPVLKKY-----P-ARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIF----H-----NGGE 268 (376)
Q Consensus 204 G~~l~l~a~~~~a~~~v~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~ 268 (376)
|.++++.+.++.+++.++.|+..++. . ++.+...+....+.+.+++...+.|+....... . +...
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 67899999999999999999988773 2 788999999999999999988877653211110 0 2244
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcc
Q 017167 269 VFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPN 341 (376)
Q Consensus 269 ~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~ 341 (376)
+..++..|++ ...-....+..+++.+|...++.+.+..+...+++++++||++++.+++|.++.+.|.++++
T Consensus 81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 5566666665 66777788899999999999999999999999999999999999999999999999998875
No 39
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.97 E-value=2.9e-09 Score=100.90 Aligned_cols=139 Identities=12% Similarity=0.187 Sum_probs=110.3
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCccccc--ccCCchhHHHHHHH
Q 017167 199 KNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWI--FHNGGEVFSILYAG 276 (376)
Q Consensus 199 ~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~g 276 (376)
++..+|++++++++++|+...+..|.. .+. ++.+..++++.++.+.+.+.....+ +..... ..+...+. ....+
T Consensus 4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~-~~~~~~~~R~~~a~~~l~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~ 79 (296)
T PRK15430 4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YYV-PADEILTHRVIWSFFFMVVLMSICR-QWSYLKTLIQTPQKIF-MLAVS 79 (296)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHh-cCC-CHHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHcCHHHHH-HHHHH
Confidence 355789999999999999999999764 556 5899999999999887776654332 111110 01222332 23355
Q ss_pred HHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcc
Q 017167 277 VVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPN 341 (376)
Q Consensus 277 ~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~ 341 (376)
.++.+..+.++++++++.+++.++.+.++.|+++.++++++++|+++..+++|.++.+.|+++..
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 56678889999999999999999999999999999999999999999999999999999988753
No 40
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.95 E-value=6.5e-10 Score=95.49 Aligned_cols=217 Identities=13% Similarity=0.053 Sum_probs=160.9
Q ss_pred HHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCC
Q 017167 97 TANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPP 176 (376)
Q Consensus 97 ~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~ 176 (376)
+..+..|..|++.+++++++.+..+..-|+.+++++.+|+|+.. .++++.++++.|++++++.+.+
T Consensus 64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~------~kIlaailAI~GiVmiay~DN~-------- 129 (290)
T KOG4314|consen 64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMG------FKILAAILAIGGIVMIAYADNE-------- 129 (290)
T ss_pred ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhh------hhHHHHHHHhCcEEEEEeccch--------
Confidence 46788899999999999999999999999999999999999999 7999999999999999743221
Q ss_pred CCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHH----HHHHHHH
Q 017167 177 LNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLI----QFMIIAA 252 (376)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 252 (376)
..+...|+.++..++...++|-+.-|+...+.+ --....++...|.+ ...|...
T Consensus 130 ---------------------~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn-~Gdaa~FmS~LGF~NL~~~~~~~lI 187 (290)
T KOG4314|consen 130 ---------------------HADEIIGIACAVGSAFMAALYKVLFKMFIGNAN-FGDAAHFMSCLGFFNLCFISFPALI 187 (290)
T ss_pred ---------------------hhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCc-chhHHHHHHHHHHHHHHHHhhhHHH
Confidence 234568999999999999999999999887653 22222333333322 1222222
Q ss_pred HhhcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhh
Q 017167 253 IFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATS 332 (376)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~l 332 (376)
+.-.+.+.|+...-..|+.+...+.+ +..-..+.+.++....|...|+-+.....-....+.++-+-+.+...+.|..+
T Consensus 188 L~~T~VE~~qsFA~~PWG~l~G~A~L-~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~i 266 (290)
T KOG4314|consen 188 LAFTGVEHLQSFAAAPWGCLCGAAGL-SLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCI 266 (290)
T ss_pred HHHhchHHHHHHhhCCchhhhhHHHH-HHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 11112223332223346666666665 33334556788888899999999999989999999886666789999999999
Q ss_pred hhhhhhhccccccccchh
Q 017167 333 PARSILLPNRWMSTCMLS 350 (376)
Q Consensus 333 I~~gi~l~~~~~~~~~~~ 350 (376)
|+.|-++...+++++++.
T Consensus 267 I~i~FiLiiiP~d~~eI~ 284 (290)
T KOG4314|consen 267 ICIGFILIIIPEDKDEIG 284 (290)
T ss_pred HHHhHHheecccchhhcc
Confidence 999999988777766653
No 41
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.94 E-value=1.3e-08 Score=98.79 Aligned_cols=136 Identities=10% Similarity=0.135 Sum_probs=104.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-hHHHHHHHHHHHHHHHHHHHhhhhccC----CCCCHHHHHHHHHHHHH
Q 017167 20 LQLHLAMVALQFGYAGFHVVSRAALNMGISK-LVFPVYRNIIAFLLLLPFAYFLEKKER----PAMTLNFALQFILLALV 94 (376)
Q Consensus 20 ~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~-~~~~~~r~~~a~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~ 94 (376)
..|..+++.++++|+.+.+..|...++ .++ ...+++....+.+.+.+......+.+. ...+.. ....+..+++
T Consensus 188 ~lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~ 265 (358)
T PLN00411 188 LIGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII 265 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH
Confidence 558899999999999999999988775 554 455666666666655544443322111 112222 2234445555
Q ss_pred HHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhh
Q 017167 95 GITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL 164 (376)
Q Consensus 95 ~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~ 164 (376)
..+.+.++++++++.+++.+++..++.|++++++++++++|++++ .+++|.++.+.|+.++..
T Consensus 266 -t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~------~~~iG~~LIl~Gv~l~~~ 328 (358)
T PLN00411 266 -TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYL------GCLIGGILITLGFYAVMW 328 (358)
T ss_pred -HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcH------HHHHHHHHHHHHHHHHHh
Confidence 467888999999999999999999999999999999999999999 599999999999999873
No 42
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.94 E-value=4.8e-09 Score=97.23 Aligned_cols=136 Identities=12% Similarity=0.200 Sum_probs=108.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCc---ccccccCCch-hHHHHHHHHH
Q 017167 203 LGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNL---DAWIFHNGGE-VFSILYAGVV 278 (376)
Q Consensus 203 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~ll~~g~~ 278 (376)
+|..++++++++|+...+..|. ..+. ++.++.+++++.+.+.+.+......+.. ......+..+ +..+...|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 4889999999999999999997 4556 6999999999999888766654432110 0111111222 3345566665
Q ss_pred HHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcc
Q 017167 279 ASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPN 341 (376)
Q Consensus 279 ~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~ 341 (376)
..+.+.++++++++.+++.++.+.++.|+++.++++++++|+++..+++|..+.+.|+++..
T Consensus 80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 78889999999999999999999999999999999999999999999999999999988763
No 43
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.86 E-value=1.8e-08 Score=95.49 Aligned_cols=133 Identities=15% Similarity=0.152 Sum_probs=103.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHH
Q 017167 20 LQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITAN 99 (376)
Q Consensus 20 ~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 99 (376)
..|.++++.++++|+.+.+..|...+ +.++..... ..+.+.+.+...... ......+.+.+...+..|+ ...++
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~~~-~~~~~~~~~---~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~-~t~~~ 228 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKYAR-GKNGITLFF---ILTALALWIKYFLSP-QPAMVFSLPAIIKLLLAAA-AMGFG 228 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccC-CCCchhHHH---HHHHHHHHHHHHHhc-CccccCCHHHHHHHHHHHH-HHHHH
Confidence 45899999999999999999999866 477765422 233333333222222 1122355667777777665 45789
Q ss_pred HHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhh
Q 017167 100 QGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL 164 (376)
Q Consensus 100 ~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~ 164 (376)
+.++++++++.++++++.+.+++|++++++++++++|+++. .+++|.++.+.|+.+...
T Consensus 229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~------~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSF------SFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcH------HHHHHHHHHHHhHHHHhh
Confidence 99999999999999999999999999999999999999999 699999999999988863
No 44
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.82 E-value=5.2e-08 Score=92.48 Aligned_cols=137 Identities=15% Similarity=0.228 Sum_probs=107.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCch---HHHHHHHHHHHHHHHHHHHhhhhc-----cCCCCCHHHHHHHHHH
Q 017167 20 LQLHLAMVALQFGYAGFHVVSRAALNMGISKL---VFPVYRNIIAFLLLLPFAYFLEKK-----ERPAMTLNFALQFILL 91 (376)
Q Consensus 20 ~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~---~~~~~r~~~a~l~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 91 (376)
..|.+++++++++|+...+..|...++ .++. ....+-...+.+.+.......+.. .....+.+.+...+..
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSH-STRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL 220 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence 469999999999999999999997653 3322 333333444333333222222211 1124567788899999
Q ss_pred HHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167 92 ALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (376)
Q Consensus 92 g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~ 163 (376)
|+++..+++.+++.++++.++++++.+..++|+++.++++++++|+++. .+++|.++.+.|+.+..
T Consensus 221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~------~~~iG~~lI~~gv~l~~ 286 (299)
T PRK11453 221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTG------LQFLGAVLIMAGLYINV 286 (299)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccH------HHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999 69999999999998875
No 45
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.81 E-value=6.9e-07 Score=85.40 Aligned_cols=299 Identities=11% Similarity=-0.027 Sum_probs=178.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHH-HHHHHHHHHH---HHHHhh-hhccCCCCCHHHHHHHHHHH
Q 017167 18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVY-RNIIAFLLLL---PFAYFL-EKKERPAMTLNFALQFILLA 92 (376)
Q Consensus 18 ~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~-r~~~a~l~l~---~~~~~~-~~~~~~~~~~~~~~~~~~~g 92 (376)
+...|+++.++++++||..+...|.. +. .+ +|.-+. -.+++.++.- ...... --.+....+.+.+...++.|
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~~-k~-w~-wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G 80 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKKV-KK-WS-WETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG 80 (345)
T ss_pred hhHHHHHHHHHHHHHhhccccccccc-CC-Cc-hhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence 35679999999999999999999983 32 33 332221 1112111111 111110 01122345677778888888
Q ss_pred HHHHHHHHHHHHHhcccCCccceeec-ccchhHHHHHHHHHHhhccc---cccccCccceeehHhHHHHhHhhhhhccCC
Q 017167 93 LVGITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEKV---RLDRKDGIAKVVGTLFCVAGATVITLYKGP 168 (376)
Q Consensus 93 ~~~~~~~~~~~~~al~~~~~~~a~ii-~~~~Pl~~~lla~l~l~e~~---~~~~~~~~~~~igi~l~~~Gv~li~~~~~~ 168 (376)
++- .+++..++.++++.+.+.+..+ ..++-+...++..++++|=- +.+ .+....+|+++.++|+.+... .+.
T Consensus 81 ~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~--~g~~~~~gv~liliGi~l~s~-Ag~ 156 (345)
T PRK13499 81 ALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATN--GGRMTLLGVLVALIGVAIVGR-AGQ 156 (345)
T ss_pred HHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccc--hHHHHHHHHHHHHHHHHHHHH-hhh
Confidence 886 7999999999999999999988 45888999999999988643 321 223577899999999999974 121
Q ss_pred cccCCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHH-------HHHHHhhhhCCCcchhHHHHHH
Q 017167 169 TIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWL-------VMQAPVLKKYPARLSVTAYTCF 241 (376)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~ 241 (376)
..++.. . ++++ .+++..+|+..++++++.++.|. ...+...+...++.....-+..
T Consensus 157 ~k~~~~---~-~~~~-------------~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~ 219 (345)
T PRK13499 157 LKERKM---G-IKKA-------------EEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYV 219 (345)
T ss_pred hccccc---c-cccc-------------cccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHH
Confidence 111000 0 0000 34667899999999999999999 4332211111123332222222
Q ss_pred ---HHHHHHHHHHHHh---h-cCcccccc-c-CCchhHHH----HHHHHHHHHHHHHHHHHHHhcCCceeee----ecch
Q 017167 242 ---FGLIQFMIIAAIF---E-RNLDAWIF-H-NGGEVFSI----LYAGVVASGIAFAVQIWCIDRGGPVFVA----VYQP 304 (376)
Q Consensus 242 ---~~~~~~~~~~~~~---~-~~~~~~~~-~-~~~~~~~l----l~~g~~~~~~~~~l~~~al~~~~a~~~s----~~~~ 304 (376)
.+.+..-...... . +....... . +...+..- ...|+. =.+++.+|..+..+.+..... +.+.
T Consensus 220 ~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~-W~~~~~~y~~~~~~~g~~~~~~sw~l~m~ 298 (345)
T PRK13499 220 VIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVM-WYLQFFFYAMGHSKLGAQYDFVSWMLHMS 298 (345)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCccchHHHHHhcc
Confidence 4433322211111 1 11110111 0 11111222 344443 567777888888887655443 3347
Q ss_pred hHHHHHHHHHHHHhCCccc------cccccchhhhhhhhhhccc
Q 017167 305 VQTLVVAIMASFALGEEFY------LGGYVPATSPARSILLPNR 342 (376)
Q Consensus 305 l~pv~a~l~~~l~l~e~~~------~~~~iG~~lI~~gi~l~~~ 342 (376)
+..+++.+.+. +++|.=+ ...++|.+++++|.++...
T Consensus 299 ~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~ 341 (345)
T PRK13499 299 FYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGL 341 (345)
T ss_pred HHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence 77799999998 5999866 4557899999999888643
No 46
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.78 E-value=3.6e-08 Score=89.04 Aligned_cols=269 Identities=14% Similarity=0.092 Sum_probs=189.4
Q ss_pred HHHHHHHhc---CC-CchHHHHHHHHHHHHHHHHHHHhhhh----ccCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017167 38 VVSRAALNM---GI-SKLVFPVYRNIIAFLLLLPFAYFLEK----KERP--AMTLNFALQFILLALVGITANQGFYLLGL 107 (376)
Q Consensus 38 ~~~k~~~~~---~~-~~~~~~~~r~~~a~l~l~~~~~~~~~----~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~al 107 (376)
...|++++. .. .|...++.+.+....+-..+.....+ .+.+ +++.+..+..+-+.+.- .+.-.+-.+.+
T Consensus 45 f~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL 123 (347)
T KOG1442|consen 45 FLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCL 123 (347)
T ss_pred hhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceeh
Confidence 345555542 12 26677788887776665555543322 1222 34444445555555442 34555567899
Q ss_pred ccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCCCCCcch
Q 017167 108 ENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTS 187 (376)
Q Consensus 108 ~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (376)
++.+++.-.+=.++..+|+++++++++|+|-+. ....+..+.+.|-.+=. +.+.
T Consensus 124 ~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~------~~~~~C~lIi~GF~lGv--dqE~------------------ 177 (347)
T KOG1442|consen 124 KYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSF------FALGCCLLIILGFGLGV--DQEG------------------ 177 (347)
T ss_pred hhcceEEEEeccchhhhHHHHhHHhhccccccc------ccceeehhheehheecc--cccc------------------
Confidence 999999999999999999999999999999888 35666666666655433 1111
Q ss_pred hhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCC-cchhHHHHHHHHHHHHHHHHHHhhcCccccc---c
Q 017167 188 TIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPA-RLSVTAYTCFFGLIQFMIIAAIFERNLDAWI---F 263 (376)
Q Consensus 188 ~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 263 (376)
+.+.-...|.++++.|+++-|+..+..|+......| -...++++++.+.++++|...+.++....+. .
T Consensus 178 --------~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l 249 (347)
T KOG1442|consen 178 --------STGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHL 249 (347)
T ss_pred --------ccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccc
Confidence 133445789999999999999999998876654432 3577888999999999998887543212221 2
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccc
Q 017167 264 HNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNR 342 (376)
Q Consensus 264 ~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~ 342 (376)
.+...|..+.+.|+++..++|. -.+-+|-.+|..-++-..-.-..-.+++..+++|.-+...|-|-.+++.|-..+.+
T Consensus 250 ~a~~Fw~~mtLsglfgF~mgyv-Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~ 327 (347)
T KOG1442|consen 250 PAIKFWILMTLSGLFGFAMGYV-TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTL 327 (347)
T ss_pred hHHHHHHHHHHHHHHHHHhhhe-eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHH
Confidence 2345677777778776555554 34667888888888888888888899999999999999999999999999888754
No 47
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.78 E-value=2e-07 Score=88.19 Aligned_cols=283 Identities=13% Similarity=0.041 Sum_probs=156.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHH
Q 017167 18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGIT 97 (376)
Q Consensus 18 ~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 97 (376)
+...|....+.++++-+....+-|....+ .+.-. .| ++..++...+ ....+.|.....
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~~~---~~----------------~~~~~~~~l~--~~~W~~G~~~~~ 61 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPRGS---LR----------------AGSGGRSYLR--RPLWWIGLLLMV 61 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhccc---cc----------------ccchhhHHHh--hHHHHHHHHHHh
Confidence 35679999999999999999988887653 11100 00 0000000011 122334444456
Q ss_pred HHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCC
Q 017167 98 ANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPL 177 (376)
Q Consensus 98 ~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~ 177 (376)
++..+-+.|+.+.|++..+++....-++.++++..++|||++. .++.|+.+++.|..++... ++.++.
T Consensus 62 ~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~------~~~~G~~l~i~G~~liv~~-~~~~~~----- 129 (300)
T PF05653_consen 62 LGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTR------RDIVGCALIILGSVLIVIF-APKEEP----- 129 (300)
T ss_pred cchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchH------hHHhhHHHHHhhheeeEEe-CCCCCC-----
Confidence 7788889999999999999999999999999999999999999 5999999999999988643 322111
Q ss_pred CCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHH---HHHHH-
Q 017167 178 NQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFM---IIAAI- 253 (376)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~- 253 (376)
.++.+.....- .+..+ +-....... +...+.....+|..++ +...........|....+ .....
T Consensus 130 -----~~t~~~l~~~~---~~~~f-l~y~~~~~~-~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i 197 (300)
T PF05653_consen 130 -----IHTLDELIALL---SQPGF-LVYFILVLV-LILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILI 197 (300)
T ss_pred -----cCCHHHHHHHh---cCcce-ehhHHHHHH-HHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHH
Confidence 00001111000 01111 111111111 1222222222221111 111111111122211111 01111
Q ss_pred hhcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhH-HHHHHHHHHHHhCCc--ccc----cc
Q 017167 254 FERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQ-TLVVAIMASFALGEE--FYL----GG 326 (376)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~-pv~a~l~~~l~l~e~--~~~----~~ 326 (376)
......+....++..|..++. -+.+........++++++.+++.+.++.+.- ...+.+-+.++++|- .++ ..
T Consensus 198 ~~~~~g~~~f~~~~~y~l~~~-~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~ 276 (300)
T PF05653_consen 198 KLTFSGDNQFTYPLTYLLLLV-LVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGF 276 (300)
T ss_pred HHHhcCchhhhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHH
Confidence 110001111123333433333 3334566667788999999999988776654 455666677778876 444 34
Q ss_pred ccchhhhhhhhhhcccccccc
Q 017167 327 YVPATSPARSILLPNRWMSTC 347 (376)
Q Consensus 327 ~iG~~lI~~gi~l~~~~~~~~ 347 (376)
..|..+++.|+++.++++++.
T Consensus 277 ~~G~~~ii~GV~lL~~~~~~~ 297 (300)
T PF05653_consen 277 LCGFLIIIIGVFLLSSSKDKE 297 (300)
T ss_pred HHHHHHHHHhhheeeccCchh
Confidence 578888999999998766654
No 48
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.77 E-value=5.5e-08 Score=80.28 Aligned_cols=123 Identities=13% Similarity=0.033 Sum_probs=95.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHH
Q 017167 203 LGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGI 282 (376)
Q Consensus 203 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~ 282 (376)
.|.++.+.+.++-+...++-|+..++.+ +.+.... . .. ..... . ++ ...++.|+++.++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~~~-~----~~-~~~~~-----~------~p---~~~i~lgl~~~~l 60 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLP-LLSHAWD-F----IA-ALLAF-----G------LA---LRAVLLGLAGYAL 60 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCC-CccchhH-H----HH-HHHHH-----h------cc---HHHHHHHHHHHHH
Confidence 4788899999999999999999888764 2221111 0 00 00011 0 11 1247778888999
Q ss_pred HHHHHHHHHhcCCceeeeecchhHHHHHHHHHHH--HhCCccccccccchhhhhhhhhhccccccc
Q 017167 283 AFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASF--ALGEEFYLGGYVPATSPARSILLPNRWMST 346 (376)
Q Consensus 283 ~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l--~l~e~~~~~~~iG~~lI~~gi~l~~~~~~~ 346 (376)
++.+|.+++++.+.+.+..+....++...+.++. ++||++++.+++|.++|++|+++.++++++
T Consensus 61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~ 126 (129)
T PRK02971 61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK 126 (129)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999999999999999999999998888888875 899999999999999999999999876554
No 49
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=98.75 E-value=5.5e-08 Score=87.96 Aligned_cols=258 Identities=14% Similarity=0.105 Sum_probs=168.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccc-CCccceeecccchhHHHHHHH
Q 017167 52 VFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLEN-TSPTFASAIQNSVPAITFLMA 130 (376)
Q Consensus 52 ~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~-~~~~~a~ii~~~~Pl~~~lla 130 (376)
.+++.++++-+.--+++--... ...++.+.|++. ..... +...+++-.+++++ ++...=.++-+-.++.+.+++
T Consensus 35 LITFaqFlFia~eGlif~skf~-~~k~kiplk~Y~--i~V~m--FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g 109 (330)
T KOG1583|consen 35 LITFAQFLFIATEGLIFTSKFF-TVKPKIPLKDYA--ITVAM--FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILG 109 (330)
T ss_pred ehHHHHHHHHHHhceeeecccc-ccCCCCchhhhh--eehhe--eeeeeeeccceeeecccceEEEEEecCcHHHHHHHH
Confidence 4556666554443333221000 112455555432 22222 24567777888887 455666677888999999999
Q ss_pred HHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHH
Q 017167 131 AIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIG 210 (376)
Q Consensus 131 ~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~ 210 (376)
|+++|+|-+. .|+.++++..+|+++.++.+....++-.++..+.+. ++....+..|+.+...
T Consensus 110 ~il~~k~Ys~------~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~------------~~~~~~w~iGi~lL~~ 171 (330)
T KOG1583|consen 110 WILLGKRYSL------RQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSA------------QSDFFWWLIGIALLVF 171 (330)
T ss_pred HHhccceeeh------hhhhhHHhhhhhheeEEeecCcchhhhhcccccCcc------------cccchHHHHHHHHHHH
Confidence 9999999888 599999999999999986544433321111111111 0144667899999999
Q ss_pred HHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHHhhcC-ccccc--------------ccCCchhHHHHH
Q 017167 211 HCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAIFERN-LDAWI--------------FHNGGEVFSILY 274 (376)
Q Consensus 211 a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------------~~~~~~~~~ll~ 274 (376)
+-+.-|.-.++++...|++. ++.+..+|.=+.....++. .+.+ .++|. ..-+..|..+
T Consensus 172 al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf----~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yL-- 245 (330)
T KOG1583|consen 172 ALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLF----MGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYL-- 245 (330)
T ss_pred HHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHH----hcchHHHHHHHHhcCcceeccccCccccHHHHHH--
Confidence 99999999999988888774 6777777776655444332 2111 01111 0112233333
Q ss_pred HHHHHHHHHHHHHHHHHhc----CCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcc
Q 017167 275 AGVVASGIAFAVQIWCIDR----GGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPN 341 (376)
Q Consensus 275 ~g~~~~~~~~~l~~~al~~----~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~ 341 (376)
+..++.|+.-.+++-. .++-.++++..++-.++++++.+.++++++++.|+|..++..|.++..
T Consensus 246 ---l~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 246 ---LFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred ---HHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 2355666665555544 456788899999999999999999999999999999999999998853
No 50
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.71 E-value=5.5e-08 Score=92.44 Aligned_cols=140 Identities=17% Similarity=0.200 Sum_probs=107.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHhhhhccCCC---------CCHHHHHH-
Q 017167 19 KLQLHLAMVALQFGYAGFHVVSRAALNM-GISKLVFPVYRNIIAFLLLLPFAYFLEKKERPA---------MTLNFALQ- 87 (376)
Q Consensus 19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~---------~~~~~~~~- 87 (376)
...|.+++++++++|+...+..|...++ +.++.....+....+.+.+.++....+...... ........
T Consensus 143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (302)
T TIGR00817 143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV 222 (302)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence 4569999999999999999999998762 389999999999999999988876543211000 01011111
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhh
Q 017167 88 FILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL 164 (376)
Q Consensus 88 ~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~ 164 (376)
.+..+.......+.+++.+++++++.++++.....|++++++++++++|+++. .+++|.++++.|+.+...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~------~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISP------QQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCch------hHHHHHHHHHHHHHHHHH
Confidence 22222222233446777899999999999999999999999999999999999 599999999999998863
No 51
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=98.70 E-value=5.6e-08 Score=88.02 Aligned_cols=278 Identities=16% Similarity=0.108 Sum_probs=188.2
Q ss_pred HHHHHHHHHHh---cCC----CchHHHHHHHHHHHHHHHHHHHhhhhccCCC-------------CCHHHHHHHHHHHHH
Q 017167 35 GFHVVSRAALN---MGI----SKLVFPVYRNIIAFLLLLPFAYFLEKKERPA-------------MTLNFALQFILLALV 94 (376)
Q Consensus 35 ~~~~~~k~~~~---~~~----~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~-------------~~~~~~~~~~~~g~~ 94 (376)
.+.+.+|++-+ +|- +|......-++--+++++.+...+.+...+. .+.+. ..++.=+++
T Consensus 17 ~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p-~lfl~Pal~ 95 (372)
T KOG3912|consen 17 FNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNP-VLFLPPALC 95 (372)
T ss_pred HHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCc-ceecChHHH
Confidence 45667777642 122 2455555555555677777666554422210 01111 222333444
Q ss_pred HHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCC
Q 017167 95 GITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPA 174 (376)
Q Consensus 95 ~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~ 174 (376)
- ..+..+.|.++.+++++.-+.+....-+|+.+++.-+++++++. ++|.|+.....|++++...+-....
T Consensus 96 D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~------~qWl~i~fv~lGlviVg~~d~~~~~--- 165 (372)
T KOG3912|consen 96 D-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITG------RQWLGILFVSLGLVIVGSLDVHLVT--- 165 (372)
T ss_pred H-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccch------hhHHHHHHHHhhhheeeeeeccccc---
Confidence 4 46778899999999999999999999999999999999999999 5999999999999998532111100
Q ss_pred CCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHH
Q 017167 175 PPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAI 253 (376)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 253 (376)
++..+.+....|+++.+.+=+.-|+.++.-+|..+++. +|.....|.-.+|.+.+..++..
T Consensus 166 ------------------~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~ 227 (372)
T KOG3912|consen 166 ------------------DPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIP 227 (372)
T ss_pred ------------------CCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHH
Confidence 01002355678999999999999999999999888765 78899999988886665554444
Q ss_pred hhc-Ccc-cccccC---CchhH---------HHHHHHHHHHHHHHHHHH----HHHhcCCceeeeecchhHHHHHHHHHH
Q 017167 254 FER-NLD-AWIFHN---GGEVF---------SILYAGVVASGIAFAVQI----WCIDRGGPVFVAVYQPVQTLVVAIMAS 315 (376)
Q Consensus 254 ~~~-~~~-~~~~~~---~~~~~---------~ll~~g~~~~~~~~~l~~----~al~~~~a~~~s~~~~l~pv~a~l~~~ 315 (376)
+.. +.. .+...+ ..+|. ..+++...+..++..+++ .-.|+.+++.=.++..+...+.=+++.
T Consensus 228 m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si 307 (372)
T KOG3912|consen 228 MYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSI 307 (372)
T ss_pred HhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHH
Confidence 321 111 111100 11121 122333333444444444 335667777778888889998889999
Q ss_pred HHhCCccccccccchhhhhhhhhhcc
Q 017167 316 FALGEEFYLGGYVPATSPARSILLPN 341 (376)
Q Consensus 316 l~l~e~~~~~~~iG~~lI~~gi~l~~ 341 (376)
....|.+...|+.|.++.+.|+++++
T Consensus 308 ~m~~E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 308 AMGWEYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999986
No 52
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.69 E-value=3.7e-07 Score=82.46 Aligned_cols=306 Identities=13% Similarity=0.102 Sum_probs=203.1
Q ss_pred ccchHHHHHHHHHHHHHH-HHHHHHHHHHhc-CCCch--HHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHH
Q 017167 17 PEKLQLHLAMVALQFGYA-GFHVVSRAALNM-GISKL--VFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLA 92 (376)
Q Consensus 17 ~~~~~g~~~~lla~~~~g-~~~~~~k~~~~~-~~~~~--~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g 92 (376)
++++..++....+.++.- .+...-.+..+. ++.|. -+++.++++-..+.+..+...+ .+++..++| .+..++
T Consensus 38 kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~-~k~r~iP~r---tY~~la 113 (367)
T KOG1582|consen 38 KPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQ-TKRRVIPWR---TYVILA 113 (367)
T ss_pred CchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeec-ccceecchh---HhhhhH
Confidence 345555554444433322 233333333332 56653 5666676665444443332221 122233444 344444
Q ss_pred HHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccC
Q 017167 93 LVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYS 172 (376)
Q Consensus 93 ~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~ 172 (376)
.+. .....+-.-++.|+.-..-.+...+--+=+.+.+.++-|.|-++ .+.++..+...|.++..+.+.+.
T Consensus 114 ~~t-~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v------~d~~aA~lm~lGli~FTLADs~~--- 183 (367)
T KOG1582|consen 114 FLT-VGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGV------HDYIAAMLMSLGLIWFTLADSQT--- 183 (367)
T ss_pred hhh-hhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccH------HHHHHHHHHHHHHHhhhhccccc---
Confidence 443 23444455566666655555555566666677888887777777 79999999999999998644332
Q ss_pred CCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHH
Q 017167 173 PAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIA 251 (376)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 251 (376)
..+-+.+|+.+.=+|-++-|.-.-++++..+.++ ...++.++...+|.+.++...
T Consensus 184 ------------------------sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~m 239 (367)
T KOG1582|consen 184 ------------------------SPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPM 239 (367)
T ss_pred ------------------------CCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHH
Confidence 2344568999888888888888888888888876 556888999999998888777
Q ss_pred HHhhcCcccccc---cCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCcccccccc
Q 017167 252 AIFERNLDAWIF---HNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYV 328 (376)
Q Consensus 252 ~~~~~~~~~~~~---~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~i 328 (376)
..+++-...|+. .+.+..+..++.+.. +.+++.....-++..++..+..+...+--+++++++++|..++|....-
T Consensus 240 vlTge~f~a~~fcaehp~~tyGy~~~~s~~-gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~ 318 (367)
T KOG1582|consen 240 VLTGELFSAWTFCAEHPVRTYGYAFLFSLA-GYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVW 318 (367)
T ss_pred HhcccchhhhHHHHhCcHhHHHHHHHHHHH-hHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhh
Confidence 766654444432 122345555555553 6777788888889999999999999999999999999999999999999
Q ss_pred chhhhhhhhhhccc-cccccchhhHHHHHHhHhh
Q 017167 329 PATSPARSILLPNR-WMSTCMLSFWIQMFVCLTA 361 (376)
Q Consensus 329 G~~lI~~gi~l~~~-~~~~~~~~~~~~~~~~~~~ 361 (376)
|..+++.|+++--- ++.+.+++..+|-+.-..+
T Consensus 319 ~gllv~lgI~Ln~ysk~nk~~~~~~~~r~~~~~~ 352 (367)
T KOG1582|consen 319 SGLLVVLGIYLNMYSKRNKIPLASLIRRIVARAA 352 (367)
T ss_pred hhHHHHHHHHhhcccCCCCCchhhHHhhhhhhhc
Confidence 99999999999643 2355555566665554443
No 53
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.67 E-value=3.5e-08 Score=89.51 Aligned_cols=204 Identities=11% Similarity=-0.049 Sum_probs=125.4
Q ss_pred ceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcc-----------cCCCCCCCCCCC
Q 017167 114 FASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTI-----------YSPAPPLNQIQP 182 (376)
Q Consensus 114 ~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~-----------~~~~~~~~~~~~ 182 (376)
......+..++++++.++...+||.+. .++++.++...|+......+.+.. .+.+++. +
T Consensus 6 a~~~~~s~~l~~v~l~~~~~~~~~~~~------~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~-~--- 75 (222)
T TIGR00803 6 IHIIFKQNNLVLIALGNLLAAGKQVTQ------LKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSS-A--- 75 (222)
T ss_pred chHHHHhcchHHHHHhcccccceeeeh------HHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCC-c---
Confidence 334556677888888888888888775 588888888888775442211110 0000000 0
Q ss_pred CCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHH-HHHHHHHHHHHHHHHhhcCcccc
Q 017167 183 DSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAY-TCFFGLIQFMIIAAIFERNLDAW 261 (376)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 261 (376)
... ...+...|....+.+.++-+...++.++..|+.+........ ....+.+.........+.+...
T Consensus 76 ---------~~~--~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~- 143 (222)
T TIGR00803 76 ---------KTL--MFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLIS- 143 (222)
T ss_pred ---------ccc--ccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhh-
Confidence 000 123456788888888888888999988876554211111111 1122222111111111111000
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhh
Q 017167 262 IFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILL 339 (376)
Q Consensus 262 ~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l 339 (376)
.......+....+.-++..+++..+..+.+|+.++...+....++++++.+++++++||+++..+++|..+++.|+++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 144 NFGFFIGYPTAVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred ccCcccCCchHHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 000011122223333345778888999999999999999999999999999999999999999999999999999876
No 54
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.55 E-value=1.5e-07 Score=76.09 Aligned_cols=105 Identities=14% Similarity=0.230 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHH
Q 017167 238 YTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFA 317 (376)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~ 317 (376)
++...+.+.............+.+.....+.+...+..|+++...++.++++++++.++ .++.+..++|+++.++++++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence 45555566655555543221111222233556667777887667999999999999995 88899999999999999999
Q ss_pred hCCccccccccchhhhhhhhhhcccc
Q 017167 318 LGEEFYLGGYVPATSPARSILLPNRW 343 (376)
Q Consensus 318 l~e~~~~~~~iG~~lI~~gi~l~~~~ 343 (376)
++|+++..+++|..++..|+++..-.
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~ 107 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWS 107 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999997643
No 55
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.53 E-value=8.4e-07 Score=75.34 Aligned_cols=133 Identities=23% Similarity=0.318 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc------CCCchHHHHHHHHHHHHHHHHHHHhhhhccCC----CC-------CHHH
Q 017167 22 LHLAMVALQFGYAGFHVVSRAALNM------GISKLVFPVYRNIIAFLLLLPFAYFLEKKERP----AM-------TLNF 84 (376)
Q Consensus 22 g~~~~lla~~~~g~~~~~~k~~~~~------~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~----~~-------~~~~ 84 (376)
|.++++.+.++.+...+..|...++ +.++.+...+....+.+++.+.....++.+.. .. ..+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 4678999999999999999998865 68999999999999999999998776543211 01 2345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhh
Q 017167 85 ALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATV 161 (376)
Q Consensus 85 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~l 161 (376)
+..++..|+++ ...+...+..++++++...+++.....+.+.++++++++|+++. .+++|++++++|+.+
T Consensus 81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~------~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITP------LQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCH------HHHHHHHHHHHHHhe
Confidence 56666777776 57888999999999999999999999999999999999999999 599999999999875
No 56
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.50 E-value=1.6e-06 Score=84.25 Aligned_cols=152 Identities=12% Similarity=0.088 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCccccccc-CCchhHHHHHHHHHHHHHHHHHH
Q 017167 209 IGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFH-NGGEVFSILYAGVVASGIAFAVQ 287 (376)
Q Consensus 209 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~g~~~~~~~~~l~ 287 (376)
+.==.+...++...|...+..+-|..++.++++.+.+....... .+.. ...+.. ....+..++..|++ ....+...
T Consensus 55 ~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~-~~~~-~~~~~~~~~~~~~~llp~gl~-~~~~~~~~ 131 (350)
T PTZ00343 55 LTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWA-TGFR-KIPRIKSLKLFLKNFLPQGLC-HLFVHFGA 131 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHH-hCCC-CCCCCCCHHHHHHHHHHHHHH-HHHHHHHH
Confidence 33334445667788999988844999999999999876544432 1111 111111 12356678888887 44457777
Q ss_pred HHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccccccccchhhHHHHHHhHhhhccc
Q 017167 288 IWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWMSTCMLSFWIQMFVCLTAICSG 365 (376)
Q Consensus 288 ~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (376)
+.++++.+++..+++..++|++++++++++++|+++..+++|..++++|+.+.... +.+.+.++=.+++.++.|.+
T Consensus 132 ~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~--~~~~~~~G~~~~l~s~~~~a 207 (350)
T PTZ00343 132 VISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVK--ELHFTWLAFWCAMLSNLGSS 207 (350)
T ss_pred HHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecc--cchhHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999997632 22333445555555555543
No 57
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.44 E-value=2.5e-06 Score=80.61 Aligned_cols=129 Identities=19% Similarity=0.210 Sum_probs=102.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHH----HHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHH
Q 017167 19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNI----IAFLLLLPFAYFLEKKERPAMTLNFALQFILLALV 94 (376)
Q Consensus 19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~----~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 94 (376)
.++|+++.+++++.|+.+....|.. +.+|...++.... .+.+++.++ ++ .++ ...+..+..+..|++
T Consensus 150 ~~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~----~~-~~~-~~~~~~~~~~~~Gi~ 220 (290)
T TIGR00776 150 FKKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH----IL-AKP-LKKYAILLNILPGLM 220 (290)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH----hc-ccc-hHHHHHHHHHHHHHH
Confidence 3679999999999999999999975 3788888555555 333333333 11 122 233444556668888
Q ss_pred HHHHHHHHHHHhcc-cCCccceeecccchhHHHHHHHHHHhhccccccccCcccee----ehHhHHHHhHhhhh
Q 017167 95 GITANQGFYLLGLE-NTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKV----VGTLFCVAGATVIT 163 (376)
Q Consensus 95 ~~~~~~~~~~~al~-~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~----igi~l~~~Gv~li~ 163 (376)
. .+++.+|+.+.+ +.+++.+.++.+..|+.+.+.+++++||+.+++ ++ +|.++.+.|+.++.
T Consensus 221 ~-~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 221 W-GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILG 287 (290)
T ss_pred H-HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHh
Confidence 4 899999999999 999999999999999999999999999999994 89 99999999999885
No 58
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.40 E-value=3.8e-06 Score=78.47 Aligned_cols=133 Identities=16% Similarity=0.212 Sum_probs=106.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHH-HHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 017167 20 LQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPV-YRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA 98 (376)
Q Consensus 20 ~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~-~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 98 (376)
..|..+.+.+++.|+.+.+..|... + .++..... +..........+.. ..... .....+.+......|+++..+
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~g~~~~~i 227 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFF--LSGFG-APILSRAWLLLLYLGVFSTGL 227 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHH--hcccc-ccCCHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999876 3 66666665 33332222222222 11111 345678889999999998778
Q ss_pred HHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167 99 NQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (376)
Q Consensus 99 ~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~ 163 (376)
++.++++++++.+++..+.+..+.|+++.++++++++|+++. .+++|+.+.+.|+.+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~------~~~~G~~li~~g~~l~~ 286 (292)
T COG0697 228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSP------AQLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcH------HHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999 59999999999999886
No 59
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.38 E-value=4.4e-06 Score=79.85 Aligned_cols=141 Identities=14% Similarity=0.065 Sum_probs=112.5
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCC--CCCHHHHHHHHHHHHH
Q 017167 17 PEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERP--AMTLNFALQFILLALV 94 (376)
Q Consensus 17 ~~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~ 94 (376)
.+..+|-++++.+++++|.+++.-+...++ .++.++...-.+++.++..+.....++++.. .++.+.+..++.-++
T Consensus 164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~- 241 (334)
T PF06027_consen 164 SNPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYAL- 241 (334)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHH-
Confidence 457889999999999999999999999985 8999999988899988888877766655433 334444333333333
Q ss_pred HHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhc
Q 017167 95 GITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLY 165 (376)
Q Consensus 95 ~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~ 165 (376)
+....+.+.-..+++.+++...+=.-+..+++.+++.+++|+++++ ..++|.++.++|.++....
T Consensus 242 ~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~------ly~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 242 CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSW------LYILAFALIIIGFVVYNLA 306 (334)
T ss_pred HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccH------HHHHHHHHHHHHhheEEcc
Confidence 3345566667778899998888888889999999999999999999 7999999999999998743
No 60
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.33 E-value=6e-08 Score=86.38 Aligned_cols=276 Identities=13% Similarity=0.092 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017167 22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG 101 (376)
Q Consensus 22 g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 101 (376)
.++.+++-++.||..+...... |-+|.+-+..--+-+.++...+.++ ..|..+.+.+..-++.|.+. .+++.
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~----~~p~~T~~~~iv~~isG~~W-s~GQ~ 74 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF----VSPELTLTIFIVGFISGAFW-SFGQA 74 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee----ecCccchhhHHHHHHhhhHh-hhhhh
Confidence 5678899999999998776542 4556665444444444433333333 23456777777777888886 79999
Q ss_pred HHHHhcccCCccceeeccc-chhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCC
Q 017167 102 FYLLGLENTSPTFASAIQN-SVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQI 180 (376)
Q Consensus 102 ~~~~al~~~~~~~a~ii~~-~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~ 180 (376)
..+.|+++.+++++.++.. ++-+-+.+++.+.++|=-+.-++. ...+++++.++|+.+-+. +.+. |+
T Consensus 75 ~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~I--lG~iAliliviG~~lTs~-~~~~--------nk- 142 (288)
T COG4975 75 NQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQII--LGFIALILIVIGIYLTSK-QDRN--------NK- 142 (288)
T ss_pred hhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHH--HHHHHHHHHHHhheEeee-eccc--------cc-
Confidence 9999999999999999865 888889999999999865552111 233455666666665542 1111 11
Q ss_pred CCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCccc
Q 017167 181 QPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDA 260 (376)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (376)
+++ +.++..+|....+.+.+.|-.|.+..+...-+.-+...-.+.-++.+++.. .. .. .
T Consensus 143 ~~~-------------~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~ali~---~~-~~-~--- 201 (288)
T COG4975 143 EEE-------------NPSNLKKGIVILLISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGALIL---GF-FK-M--- 201 (288)
T ss_pred ccc-------------ChHhhhhheeeeeeeccceeeeEeeeccccccchhhhhHHHHHHHHHHHHH---hh-cc-c---
Confidence 111 345577899999999999999999865542110022222333333333221 11 11 1
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccc----cchhhhhhh
Q 017167 261 WIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGY----VPATSPARS 336 (376)
Q Consensus 261 ~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~----iG~~lI~~g 336 (376)
+....+..+.-...|+. -+++...+..+.++.+....=.+..+..+++.+-+.++++|+=|..++ +|..+++.|
T Consensus 202 -~~~~~K~t~~nii~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvg 279 (288)
T COG4975 202 -EKRFNKYTWLNIIPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVG 279 (288)
T ss_pred -ccchHHHHHHHHhhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHH
Confidence 11123444455666776 788889999999999998888888999999999999999999887765 567777666
Q ss_pred hhhc
Q 017167 337 ILLP 340 (376)
Q Consensus 337 i~l~ 340 (376)
..+.
T Consensus 280 ai~l 283 (288)
T COG4975 280 AILL 283 (288)
T ss_pred hhhh
Confidence 5553
No 61
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.29 E-value=2e-06 Score=69.22 Aligned_cols=67 Identities=9% Similarity=0.028 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccc
Q 017167 276 GVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNR 342 (376)
Q Consensus 276 g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~ 342 (376)
++++.++++.++.+++++.+.+++-.+..+.++++.+.+++++||++++.+++|.++++.|+++..+
T Consensus 43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4456788999999999999999999999999999999999999999999999999999999988754
No 62
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.21 E-value=5.8e-06 Score=75.95 Aligned_cols=138 Identities=11% Similarity=0.189 Sum_probs=113.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCccccc-ccCCchhHHHHHHHHH
Q 017167 200 NWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWI-FHNGGEVFSILYAGVV 278 (376)
Q Consensus 200 ~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~g~~ 278 (376)
+...|+++++.|-+.|+.--.+.|. .++. ++.++..++.+.+............+..+.++ ..++..+......+..
T Consensus 4 ~~~~Gil~~l~Ay~lwG~lp~y~kl-l~~~-~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l 81 (293)
T COG2962 4 DSRKGILLALLAYLLWGLLPLYFKL-LEPL-PATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL 81 (293)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHH-HccC-CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence 3468999999999999998887766 4566 48899999999998887776665543222222 2345667777777776
Q ss_pred HHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhc
Q 017167 279 ASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLP 340 (376)
Q Consensus 279 ~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~ 340 (376)
.......+.++.++....++|+-.+++|.+.+++|.++++|+++..|++...+..+|+...
T Consensus 82 -i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~ 142 (293)
T COG2962 82 -IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQ 142 (293)
T ss_pred -HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 7888999999999999999999999999999999999999999999999999999998764
No 63
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.18 E-value=1e-05 Score=65.12 Aligned_cols=69 Identities=22% Similarity=0.199 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167 89 ILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (376)
Q Consensus 89 ~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~ 163 (376)
...++++..++..++..++++.|.+.+..+.++.++++.+++++++|||+++ .+++|+.+.++|++++.
T Consensus 40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~------~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSP------RHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHHHh
Confidence 3444466778999999999999999999999999999999999999999999 59999999999999885
No 64
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.18 E-value=9.7e-06 Score=72.82 Aligned_cols=136 Identities=13% Similarity=0.063 Sum_probs=116.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 017167 19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA 98 (376)
Q Consensus 19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 98 (376)
+..|..+++.+..+|+.+.+..|..-+. .+...-+..-+.+++++.+|+-....... -.++.-....+..|+++..+
T Consensus 146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~~--l~~p~ll~laLgvavlSSal 222 (292)
T COG5006 146 DPVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGPA--LFSPSLLPLALGVAVLSSAL 222 (292)
T ss_pred CHHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcchh--hcChHHHHHHHHHHHHhccc
Confidence 4579999999999999999999998753 66677788899999999999986543322 24566677788899999999
Q ss_pred HHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167 99 NQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (376)
Q Consensus 99 ~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~ 163 (376)
.+.+-..++++.|...-+.+.++.|.+.++.++++++|+++. .||+++...+.+..-.+
T Consensus 223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~------~qwlaI~~ViaAsaG~~ 281 (292)
T COG5006 223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTL------IQWLAIAAVIAASAGST 281 (292)
T ss_pred chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCH------HHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999 59999998888777554
No 65
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=98.17 E-value=4.5e-06 Score=73.45 Aligned_cols=269 Identities=12% Similarity=0.127 Sum_probs=178.9
Q ss_pred HHHHHHHHHhc-CCC-chHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcc
Q 017167 36 FHVVSRAALNM-GIS-KLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPT 113 (376)
Q Consensus 36 ~~~~~k~~~~~-~~~-~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~ 113 (376)
+.+..|+..+. |++ -+..++.+.+.+.+-+..+-+.+.. +.+..+.+.|.. ..++. ..-...---+++|++..
T Consensus 21 mTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~-~fR~t~aK~Wfp---iSfLL-v~MIyt~SKsLqyL~vp 95 (309)
T COG5070 21 MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLV-EFRLTKAKKWFP---ISFLL-VVMIYTSSKSLQYLAVP 95 (309)
T ss_pred HHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHh-heehhhhhhhcC---HHHHH-HHHHHhcccceeeeeee
Confidence 44556666653 343 3456677777766655544433221 222222233322 22221 12222334679999999
Q ss_pred ceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCCCCCcchhhhccc
Q 017167 114 FASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSL 193 (376)
Q Consensus 114 ~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (376)
.-++..++..+..+....+++|.|++- .+..+.++.+..-+.-. .++... +.
T Consensus 96 iYTiFKNltII~iAygEvl~Fgg~vts------l~l~SFilMvlSS~va~--w~D~q~--------------------~~ 147 (309)
T COG5070 96 IYTIFKNLTIILIAYGEVLFFGGRVTS------LELLSFILMVLSSVVAT--WGDQQA--------------------SA 147 (309)
T ss_pred HHHHhccceeehhHhhHHHHhcCccch------hhHHHHHHHHHHHHHhc--cchhhH--------------------HH
Confidence 999999999999999999999999988 67777777666655543 122100 00
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHHhhc-Ccccccc-cCCchhH
Q 017167 194 GDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAIFER-NLDAWIF-HNGGEVF 270 (376)
Q Consensus 194 ~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~ 270 (376)
- .....+.|++++...++.-+.+-...|+..+-.+ ......+|..+.+...++...+++|+ ....... .+.....
T Consensus 148 ~--~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~ 225 (309)
T COG5070 148 F--KAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLM 225 (309)
T ss_pred H--HhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHH
Confidence 0 1123567999999999999999998887665332 46778899999999888888887653 2221111 1223455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhc
Q 017167 271 SILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLP 340 (376)
Q Consensus 271 ~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~ 340 (376)
++...|+. +..--++-.++++-.+.+..+++..++-.-..+.|.+++||+.+...+....+-..+..++
T Consensus 226 am~ISgl~-svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iY 294 (309)
T COG5070 226 AMFISGLC-SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIY 294 (309)
T ss_pred HHHHHHHH-HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHH
Confidence 67777776 4444556778999999999999999999999999999999999998888777765544443
No 66
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=98.07 E-value=7.6e-07 Score=80.34 Aligned_cols=136 Identities=12% Similarity=0.063 Sum_probs=100.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHH
Q 017167 200 NWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVA 279 (376)
Q Consensus 200 ~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~ 279 (376)
..++|..+.-++ ..+...+++.++..+.. |.......++.-.+...|-.+...... +. +...--++++=|+.
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~--p~e~a~~r~l~~mlit~pcliy~~~~v--~g--p~g~R~~LiLRg~m- 106 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEND--PMELASFRLLVRMLITYPCLIYYMQPV--IG--PEGKRKWLILRGFM- 106 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhccC--hhHhhhhhhhhehhhhheEEEEEeeee--ec--CCCcEEEEEeehhh-
Confidence 456888888888 88888899988887664 566666665555555444444322221 11 11111224445565
Q ss_pred HHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcccc
Q 017167 280 SGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRW 343 (376)
Q Consensus 280 ~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~ 343 (376)
+..+..+.++++++.+-+.+.++..++|+++.+++|++++|+.+....+|..+.+.|+++..|.
T Consensus 107 G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRP 170 (346)
T KOG4510|consen 107 GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRP 170 (346)
T ss_pred hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecC
Confidence 4455666779999999999999999999999999999999999999999999999999998765
No 67
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.06 E-value=2.8e-05 Score=64.24 Aligned_cols=117 Identities=21% Similarity=0.162 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017167 22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG 101 (376)
Q Consensus 22 g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 101 (376)
++++++++.++-+...++.|...++ .+....... . . ..... . ......+..|++...++..
T Consensus 3 ~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~-~----~~~~~-~-----------~~p~~~i~lgl~~~~la~~ 63 (129)
T PRK02971 3 GYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-F-I----AALLA-F-----------GLALRAVLLGLAGYALSML 63 (129)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-H-H----HHHHH-H-----------hccHHHHHHHHHHHHHHHH
Confidence 6788889999999999999999875 554432221 1 0 00000 0 0002367788888889999
Q ss_pred HHHHhcccCCccceeecccchhHHHHHHHHH--HhhccccccccCccceeehHhHHHHhHhhhh
Q 017167 102 FYLLGLENTSPTFASAIQNSVPAITFLMAAI--FRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (376)
Q Consensus 102 ~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l--~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~ 163 (376)
++.+++++.|++.+..+.+..+.++.+.++. ++||++++ .+++|+++.++|++++.
T Consensus 64 ~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~------~~~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 64 CWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSL------KKTLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCH------HHHHHHHHHHHHHHHhc
Confidence 9999999999999999999998888888884 89999999 59999999999999986
No 68
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.93 E-value=5.8e-05 Score=69.68 Aligned_cols=134 Identities=21% Similarity=0.199 Sum_probs=95.9
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHH
Q 017167 17 PEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGI 96 (376)
Q Consensus 17 ~~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 96 (376)
.+..+++..++.+++.|..+..+.|.. +.+++...+-..+--.+....+..+. ++ +...|..++-++.|++.
T Consensus 134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~-~~---~~~~k~~~~nil~G~~w- 205 (269)
T PF06800_consen 134 SNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFS-KK---PFFEKKSWKNILTGLIW- 205 (269)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcc-cc---cccccchHHhhHHHHHH-
Confidence 456789999999999999999998873 47887766655444444334443332 11 12223345567777774
Q ss_pred HHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHh
Q 017167 97 TANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGAT 160 (376)
Q Consensus 97 ~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~ 160 (376)
.+++.+++.+.+..+.+.+-.+..+..+...+-+.+++||+-+.|+. ....+|.++.++|.+
T Consensus 206 ~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~--~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 206 GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEM--IYTLIGLILIVIGAI 267 (269)
T ss_pred HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhH--HHHHHHHHHHHHhhh
Confidence 78999999999999999999999999999999999999999777421 123345555555544
No 69
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.81 E-value=4.1e-05 Score=71.25 Aligned_cols=275 Identities=15% Similarity=0.118 Sum_probs=163.2
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHH
Q 017167 17 PEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGI 96 (376)
Q Consensus 17 ~~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 96 (376)
.+...|.++.+.+.+..|.+..+-|+...+ ... .. .+. ++.+..-.++ +..+.|.+.+
T Consensus 17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~---~~---------------~ra-~~gg~~yl~~--~~Ww~G~ltm 74 (335)
T KOG2922|consen 17 SDNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA---SG---------------LRA-GEGGYGYLKE--PLWWAGMLTM 74 (335)
T ss_pred cCceeeeeehhhccEEEeeehhhhHHHHHH-Hhh---hc---------------ccc-cCCCcchhhh--HHHHHHHHHH
Confidence 345778999999999999999999987764 111 00 111 1111111122 3445677778
Q ss_pred HHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCC
Q 017167 97 TANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPP 176 (376)
Q Consensus 97 ~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~ 176 (376)
.++...-|.|+.+.|++..+++..+.-++.++++..+++||+++ ...+|+.++++|-.++.. ..+.++.
T Consensus 75 ~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~------~g~lGc~l~v~Gst~iV~-haP~e~~---- 143 (335)
T KOG2922|consen 75 IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNL------LGILGCVLCVVGSTTIVI-HAPKEQE---- 143 (335)
T ss_pred HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHH------hhhhheeEEecccEEEEE-ecCcccc----
Confidence 88999999999999999999999999999999999999999999 699999999999999974 3332211
Q ss_pred CCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHH--------
Q 017167 177 LNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFM-------- 248 (376)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 248 (376)
.. +.-..... ..+..+..-..+.++..+ +-....+ .++ ....+..|..+.+.+..+
T Consensus 144 -----i~---t~~el~~~-~~~~~Fliy~~~iil~~~---il~~~~~---p~~-g~tnilvyi~i~s~iGS~tV~svKal 207 (335)
T KOG2922|consen 144 -----IE---SVEEVWEL-ATEPGFLVYVIIIILIVL---ILIFFYA---PRY-GQTNILVYIGICSLIGSLTVMSVKAL 207 (335)
T ss_pred -----cc---cHHHHHHH-hcCccHHHHHHHHHHHHH---HHheeec---ccc-cccceeehhhHhhhhcceeeeeHHHH
Confidence 00 00000000 011112111111111111 1111111 122 233444444444433211
Q ss_pred HHH--HHhhcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchh-HHHHHHHHHHHHhCCccc--
Q 017167 249 IIA--AIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPV-QTLVVAIMASFALGEEFY-- 323 (376)
Q Consensus 249 ~~~--~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l-~pv~a~l~~~l~l~e~~~-- 323 (376)
..+ ....+. .+. ..+.-|..++.... +...-....++|++.-+++.++++.+. -..++++.+.++++|--.
T Consensus 208 g~aiklt~~g~-~ql--~~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~ 283 (335)
T KOG2922|consen 208 GIAIKLTFSGN-NQL--FYPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQD 283 (335)
T ss_pred HHHHHHHhcCC-ccc--ccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 111 111111 121 12333444444333 345555667899999999888877664 455667778888877632
Q ss_pred ----cccccchhhhhhhhhhccccc
Q 017167 324 ----LGGYVPATSPARSILLPNRWM 344 (376)
Q Consensus 324 ----~~~~iG~~lI~~gi~l~~~~~ 344 (376)
....+|...++.|+++.++.+
T Consensus 284 ~~~i~~~~~Gf~ti~~G~flL~~~k 308 (335)
T KOG2922|consen 284 ALDIAGELCGFVTIFLGIFLLHRTK 308 (335)
T ss_pred HHHHHHHHHhHHHhhheeeEeeeec
Confidence 235689999999999987533
No 70
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.69 E-value=0.00048 Score=65.50 Aligned_cols=138 Identities=14% Similarity=0.167 Sum_probs=112.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHh--hhh-ccC---CCCCHHHHHHHHHHH
Q 017167 20 LQLHLAMVALQFGYAGFHVVSRAALNM-GISKLVFPVYRNIIAFLLLLPFAYF--LEK-KER---PAMTLNFALQFILLA 92 (376)
Q Consensus 20 ~~g~~~~lla~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~a~l~l~~~~~~--~~~-~~~---~~~~~~~~~~~~~~g 92 (376)
..|+.+++++.++-|.....-+...++ +.++.+..++...++.+...+.... .+. .+. ....+..+..++...
T Consensus 153 ~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s 232 (303)
T PF08449_consen 153 ALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFS 232 (303)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHH
Confidence 349999999999999999999998864 6889999999999999888877766 211 110 011223445556666
Q ss_pred HHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhh
Q 017167 93 LVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL 164 (376)
Q Consensus 93 ~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~ 164 (376)
+.+ .+++.+.+.-.++.++...+++..+--+++.+++.+++++++++ .+|+|+++.+.|..+-..
T Consensus 233 ~~~-~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~------~~~~G~~lv~~g~~~~~~ 297 (303)
T PF08449_consen 233 LTG-ALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSP------LQWIGIVLVFAGIFLYSY 297 (303)
T ss_pred HHH-HHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCCh------HHHHHHHHhHHHHHHHHH
Confidence 665 57777888889999999999999999999999999999999999 699999999999998763
No 71
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.59 E-value=0.00056 Score=57.20 Aligned_cols=132 Identities=14% Similarity=0.102 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHH
Q 017167 204 GCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIA 283 (376)
Q Consensus 204 G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~ 283 (376)
..++++.++..-++...++.++.++..++....+..+..|.+.+.....+.++. .........|+..+ .|++ ....
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~l-G~~~ 77 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGLL-GVFF 77 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHHH-HHHH
Confidence 357889999999999999999888875689999999999999988877766543 22222222333333 5555 7777
Q ss_pred HHHHHHHHhcCCceeee-ecchhHHHHHHHHHHH----HhCCccccccccchhhhhhhhhh
Q 017167 284 FAVQIWCIDRGGPVFVA-VYQPVQTLVVAIMASF----ALGEEFYLGGYVPATSPARSILL 339 (376)
Q Consensus 284 ~~l~~~al~~~~a~~~s-~~~~l~pv~a~l~~~l----~l~e~~~~~~~iG~~lI~~gi~l 339 (376)
..+.....++.+++... ....-|.+.++++|.+ .-++++++.+++|..+++.|+++
T Consensus 78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 88888999999987665 4455677888888886 34566999999999999999875
No 72
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.45 E-value=0.00042 Score=56.27 Aligned_cols=69 Identities=10% Similarity=0.122 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCceeeeec-chhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccccc
Q 017167 276 GVVASGIAFAVQIWCIDRGGPVFVAVY-QPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWM 344 (376)
Q Consensus 276 g~~~~~~~~~l~~~al~~~~a~~~s~~-~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~~ 344 (376)
.+.+.+++++++..++|+.+.+.+=.+ ..+..+.+.+.+++++||++++.+++|.++|++|++..+...
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 344578899999999999998766544 568889999999999999999999999999999999987533
No 73
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.28 E-value=0.00042 Score=55.50 Aligned_cols=68 Identities=9% Similarity=0.076 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHhcCCceeeee-cchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccccc
Q 017167 277 VVASGIAFAVQIWCIDRGGPVFVAV-YQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWM 344 (376)
Q Consensus 277 ~~~~~~~~~l~~~al~~~~a~~~s~-~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~~ 344 (376)
+++.++++.++..++|+.+.+.+=. ...+..+.+.+.+++++||++++.+++|..+|+.|+++.+...
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 4457888999999999998866543 3667888999999999999999999999999999999987544
No 74
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.21 E-value=0.00088 Score=53.61 Aligned_cols=110 Identities=10% Similarity=0.135 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017167 27 VALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLG 106 (376)
Q Consensus 27 lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 106 (376)
++.+++||..+++.|...+. .++..-.. |..-... . . . .+++.. ..+.....+...|++.
T Consensus 2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~-~---L-l--------~n~~y~-----ipf~lNq~GSv~f~~~ 61 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIK-F---L-L--------LNPKYI-----IPFLLNQSGSVLFFLL 61 (113)
T ss_pred eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHH-H---H-H--------HhHHHH-----HHHHHHHHHHHHHHHH
Confidence 35678999999999999873 55544331 2111111 1 0 0 112221 1333345677889999
Q ss_pred cccCCccceeec-ccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhh
Q 017167 107 LENTSPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVI 162 (376)
Q Consensus 107 l~~~~~~~a~ii-~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li 162 (376)
+.+.+.+.+.++ +++.=++|++.++++.+|..++ ..++|+.+.+.|+.+.
T Consensus 62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~------~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISR------RTWLGMALILAGVALC 112 (113)
T ss_pred HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccch------hHHHHHHHHHcCeeee
Confidence 999999999999 5788899999998887777777 4899999999998754
No 75
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.14 E-value=0.0011 Score=62.93 Aligned_cols=118 Identities=14% Similarity=0.089 Sum_probs=88.4
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHH
Q 017167 199 KNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVV 278 (376)
Q Consensus 199 ~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~ 278 (376)
.++.+|..+++.++++.+.+..++|+..++.++ .....-.. .... + .++. | +.|..
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~~~~~~--------~~~~--------l--~~~~-W----~~G~~ 58 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSLRAGSG--------GRSY--------L--RRPL-W----WIGLL 58 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccccch--------hhHH--------H--hhHH-H----HHHHH
Confidence 457899999999999999999999998766532 11000000 0000 0 0111 1 12333
Q ss_pred HHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhc
Q 017167 279 ASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLP 340 (376)
Q Consensus 279 ~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~ 340 (376)
..+++..+.+.++...+++.++++..+..+++.+++..++||+++..+++|.++++.|..+.
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~li 120 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLI 120 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheee
Confidence 35667778889999999999999999999999999999999999999999999999998774
No 76
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.09 E-value=0.0025 Score=50.88 Aligned_cols=63 Identities=10% Similarity=0.067 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHhcCCceee-eecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcc
Q 017167 279 ASGIAFAVQIWCIDRGGPVFV-AVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPN 341 (376)
Q Consensus 279 ~~~~~~~l~~~al~~~~a~~~-s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~ 341 (376)
+..+++++...++|+.+.+.+ ++...+..+.+.+.+++++||++++.+++|.++|+.|++..+
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 468899999999999987544 566678889999999999999999999999999999999864
No 77
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.05 E-value=0.015 Score=55.95 Aligned_cols=146 Identities=15% Similarity=0.097 Sum_probs=96.2
Q ss_pred ccchHHHHHHHHHHHHHHHHH-------HHHHHHHhcCCCchHHHHHHHH---HHHHH-HHHHHHhh--hhccC-----C
Q 017167 17 PEKLQLHLAMVALQFGYAGFH-------VVSRAALNMGISKLVFPVYRNI---IAFLL-LLPFAYFL--EKKER-----P 78 (376)
Q Consensus 17 ~~~~~g~~~~lla~~~~g~~~-------~~~k~~~~~~~~~~~~~~~r~~---~a~l~-l~~~~~~~--~~~~~-----~ 78 (376)
.+..+|+..++++.+.++... +..+.+.+.+.++.....-.+. ++..+ ...++... ++++. .
T Consensus 170 ~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~ 249 (345)
T PRK13499 170 FNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADF 249 (345)
T ss_pred cchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhc
Confidence 456889999999999999999 6666655556777766655555 33333 33333322 11111 1
Q ss_pred CCC----HHHHHHHHHHHHHHHHHHHHHHHHhcccCCccceee---cccchh-HHHHHHHHHHhhccccccccCccceee
Q 017167 79 AMT----LNFALQFILLALVGITANQGFYLLGLENTSPTFASA---IQNSVP-AITFLMAAIFRIEKVRLDRKDGIAKVV 150 (376)
Q Consensus 79 ~~~----~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~i---i~~~~P-l~~~lla~l~l~e~~~~~~~~~~~~~i 150 (376)
+.+ .+.....++.|+.- .+++.+|..+-+..+.+.+.+ +....+ ++..+-+. ++||+-+..||.-+.-++
T Consensus 250 ~~~~~~~~~n~l~~~l~G~~W-~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~ 327 (345)
T PRK13499 250 SLAKPLLITNVLLSALAGVMW-YLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSL 327 (345)
T ss_pred cccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHH
Confidence 112 22222235555554 688888999888887766665 664444 55555555 699998876777778899
Q ss_pred hHhHHHHhHhhhhh
Q 017167 151 GTLFCVAGATVITL 164 (376)
Q Consensus 151 gi~l~~~Gv~li~~ 164 (376)
|+++.++|..++.+
T Consensus 328 G~vliI~g~~lig~ 341 (345)
T PRK13499 328 GCVVIILAANIVGL 341 (345)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999864
No 78
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.02 E-value=0.0042 Score=51.95 Aligned_cols=130 Identities=12% Similarity=0.086 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017167 23 HLAMVALQFGYAGFHVVSRAALNMGIS-KLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG 101 (376)
Q Consensus 23 ~~~~lla~~~~g~~~~~~k~~~~~~~~-~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 101 (376)
.++.+++..+-+....+...+.++ .+ |+...++.+..+++.+..+....++++....+ +..+|...-|+++ ...-.
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~-~~p~w~~lGG~lG-~~~V~ 79 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLS-SVPWWAYLGGLLG-VFFVL 79 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhc-cCChHHhccHHHH-HHHHH
Confidence 466778888888888888887775 65 99999999999999998888876654333222 2234555577777 57788
Q ss_pred HHHHhcccCCccceeeccc-chhHHHHHHHHH----HhhccccccccCccceeehHhHHHHhHhh
Q 017167 102 FYLLGLENTSPTFASAIQN-SVPAITFLMAAI----FRIEKVRLDRKDGIAKVVGTLFCVAGATV 161 (376)
Q Consensus 102 ~~~~al~~~~~~~a~ii~~-~~Pl~~~lla~l----~l~e~~~~~~~~~~~~~igi~l~~~Gv~l 161 (376)
+..+.+++++++.+..+.- -+-+...++..+ .-++|+++ .+.+|+.+.++|+.+
T Consensus 80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~------~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSL------RRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCH------HHHHHHHHHHHHHhC
Confidence 8889999999988886655 455555666663 34456666 699999999999864
No 79
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.00 E-value=0.0042 Score=52.15 Aligned_cols=140 Identities=14% Similarity=0.109 Sum_probs=98.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHH
Q 017167 202 TLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASG 281 (376)
Q Consensus 202 ~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~ 281 (376)
.+..++++.++.+-.+..-...++.+...+|....+..+..|++.+..+..+.+ ...++.......||. ...|++ .+
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~-~~~~~a~~~~~pwW~-~~GG~l-Ga 80 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQ-GHPGLAAVASAPWWA-WIGGLL-GA 80 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhc-CCCchhhccCCchHH-HHccch-hh
Confidence 467788999999999999999998888767888889999999988888777643 333333222223333 333443 33
Q ss_pred HHHHHHHHHHhcCCc-eeeeecchhHHHHHHHHHHHHhC----Cccccccccchhhhhhhhhhccccc
Q 017167 282 IAFAVQIWCIDRGGP-VFVAVYQPVQTLVVAIMASFALG----EEFYLGGYVPATSPARSILLPNRWM 344 (376)
Q Consensus 282 ~~~~l~~~al~~~~a-~~~s~~~~l~pv~a~l~~~l~l~----e~~~~~~~iG~~lI~~gi~l~~~~~ 344 (376)
+-...-....++.++ ........-|-+.++++|.+=+. .+++...++|.+++++|+++.++++
T Consensus 81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~ 148 (150)
T COG3238 81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG 148 (150)
T ss_pred hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence 333334455666665 44556667788888888876554 5599999999999999977766554
No 80
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=96.99 E-value=0.0035 Score=59.70 Aligned_cols=141 Identities=13% Similarity=0.169 Sum_probs=113.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCchHHHHHHHHHHHHHHHHHHHhhhh---ccCCCCCHHHHHHHHHH
Q 017167 18 EKLQLHLAMVALQFGYAGFHVVSRAALNM---GISKLVFPVYRNIIAFLLLLPFAYFLEK---KERPAMTLNFALQFILL 91 (376)
Q Consensus 18 ~~~~g~~~~lla~~~~g~~~~~~k~~~~~---~~~~~~~~~~r~~~a~l~l~~~~~~~~~---~~~~~~~~~~~~~~~~~ 91 (376)
+...|-++.++++++||.+.++.|.-.++ ..+-..+-.+-.++..++++|..+.... .+..-++..+...++..
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~ 323 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN 323 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence 45789999999999999999999987754 2566666667777778888876665432 22333445566777888
Q ss_pred HHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhh
Q 017167 92 ALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL 164 (376)
Q Consensus 92 g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~ 164 (376)
++++..++..+|..|.-.+++-.+++-+..+-..+.+...++-+.++++ ..++|.+..++|-+++.+
T Consensus 324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~------~~iiGsi~Ifv~Fv~vn~ 390 (416)
T KOG2765|consen 324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSA------LYIIGSIPIFVGFVIVNI 390 (416)
T ss_pred hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCH------HHHHHHHHHHHHHhheec
Confidence 9999999999999999999999999888888888888888887777777 799999999999998864
No 81
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.83 E-value=0.0017 Score=59.68 Aligned_cols=103 Identities=13% Similarity=0.073 Sum_probs=80.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcccccc
Q 017167 266 GGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWMS 345 (376)
Q Consensus 266 ~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~~~ 345 (376)
..+...+..-+++ ..+...+.+.++++.+|+...++..+..+++.++++++++++.+..||++..+.+.|+.+.+....
T Consensus 14 ~~~~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~ 92 (244)
T PF04142_consen 14 PKDTLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS 92 (244)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence 3445555666665 788889999999999999999999999999999999999999999999999999999999864322
Q ss_pred cc---------------chhhHHHHHHhHhhhcccccee
Q 017167 346 TC---------------MLSFWIQMFVCLTAICSGPQFT 369 (376)
Q Consensus 346 ~~---------------~~~~~~~~~~~~~~~~~~~~~~ 369 (376)
.. +....+=...+.++.|||=+.-
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agV 131 (244)
T PF04142_consen 93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGV 131 (244)
T ss_pred cccccccccccccccccchhHhHHHHHHHHHHHHHHHHH
Confidence 21 2233444455566677775543
No 82
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.78 E-value=0.0027 Score=51.62 Aligned_cols=66 Identities=23% Similarity=0.207 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHhcccCCccceeecc-cchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167 92 ALVGITANQGFYLLGLENTSPTFASAIQ-NSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (376)
Q Consensus 92 g~~~~~~~~~~~~~al~~~~~~~a~ii~-~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~ 163 (376)
.+....++..++..++++.|.+.+-.+. ...-+.+++++++++||++++ .+++|+.+.++|++.+-
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~------~~~~gi~lIi~GVi~l~ 102 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSL------MKIAGLTTLVAGIVLIK 102 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHHhh
Confidence 4444567889999999999999888774 588899999999999999999 59999999999999885
No 83
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=96.76 E-value=0.003 Score=59.93 Aligned_cols=138 Identities=14% Similarity=0.207 Sum_probs=111.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCchHHHHHHHHHHHHHHH-HHHHhhhhccC-----CCCCHHHHHHH
Q 017167 18 EKLQLHLAMVALQFGYAGFHVVSRAALN---MGISKLVFPVYRNIIAFLLLL-PFAYFLEKKER-----PAMTLNFALQF 88 (376)
Q Consensus 18 ~~~~g~~~~lla~~~~g~~~~~~k~~~~---~~~~~~~~~~~r~~~a~l~l~-~~~~~~~~~~~-----~~~~~~~~~~~ 88 (376)
=++.|...++++.+..+...++.|..+. ...+++.+..+..-.+...++ |+....+.... ...+...+. .
T Consensus 160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~-~ 238 (316)
T KOG1441|consen 160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLI-L 238 (316)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHH-H
Confidence 3578999999999999999999999983 258999999999999999888 88766443222 123333333 3
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167 89 ILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (376)
Q Consensus 89 ~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~ 163 (376)
....++. ...+...|..+.+++|-+-++....-=.++...++++++|++++ .+..|+.++++|+.+-.
T Consensus 239 ~~~sv~~-f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~------~n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 239 LLNSVLA-FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTF------LNALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHHH-HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCch------hhHHHHHHHHHHHHHHH
Confidence 3444555 56778899999999999999999888888999999999999999 69999999999999875
No 84
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.75 E-value=0.0017 Score=51.14 Aligned_cols=64 Identities=11% Similarity=0.105 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHhcCCcee-eeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccc
Q 017167 279 ASGIAFAVQIWCIDRGGPVF-VAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNR 342 (376)
Q Consensus 279 ~~~~~~~l~~~al~~~~a~~-~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~ 342 (376)
+..+++.+...++|+.+.+. -++......+.+.+.++++|||+.++.+++|..++++|++..+.
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 46788999999999998744 46778888999999999999999999999999999999998764
No 85
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.70 E-value=0.003 Score=50.06 Aligned_cols=66 Identities=18% Similarity=0.142 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHhcCCceee-eecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccc
Q 017167 277 VVASGIAFAVQIWCIDRGGPVFV-AVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNR 342 (376)
Q Consensus 277 ~~~~~~~~~l~~~al~~~~a~~~-s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~ 342 (376)
+++..+++++...++|+.+.+.+ ++...+..+.+.+.+++++||++++.+++|..+|+.|++..+.
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 33478899999999999987543 5667788899999999999999999999999999999998753
No 86
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.60 E-value=0.0031 Score=50.48 Aligned_cols=66 Identities=20% Similarity=0.209 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHhcccCCccceeec-ccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167 92 ALVGITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (376)
Q Consensus 92 g~~~~~~~~~~~~~al~~~~~~~a~ii-~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~ 163 (376)
.+.+..++..++..++++.|.+.+-.+ ....-+.+.+++++++||++++ .+++|+.+.++|++++-
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~------~~~~gi~lIi~GVi~l~ 102 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL------PAIIGMMLICAGVLVIN 102 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHHHh
Confidence 344456778888889999999888766 4577788899999999999999 69999999999999995
No 87
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.55 E-value=0.015 Score=46.39 Aligned_cols=62 Identities=16% Similarity=0.119 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHhcccCCccceeec-ccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhh
Q 017167 95 GITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVI 162 (376)
Q Consensus 95 ~~~~~~~~~~~al~~~~~~~a~ii-~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li 162 (376)
+..+++.+...+++++|.+.+-.+ ....-+.+++.+++++||++++ .+++++.+.+.|++.+
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~------~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNR------KGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCH------HHHHHHHHHHHHHHHh
Confidence 345788888899999999888766 4477788899999999999999 6999999999999986
No 88
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.47 E-value=0.011 Score=47.24 Aligned_cols=109 Identities=5% Similarity=-0.070 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHHHHHHHH
Q 017167 210 GHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIW 289 (376)
Q Consensus 210 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~ 289 (376)
+-+++|+..+-+.||..++.+ +..-.. +....... ++ ..|-.++ ....+..+-..|++
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~-~~~~~~-~~~~~~~~-----Ll-------------~n~~y~i--pf~lNq~GSv~f~~ 60 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLE-KVKASL-QLLQEIKF-----LL-------------LNPKYII--PFLLNQSGSVLFFL 60 (113)
T ss_pred eehHHhcCchHHHHHHHhhcC-CccchH-HHHHHHHH-----HH-------------HhHHHHH--HHHHHHHHHHHHHH
Confidence 457899999999999988774 222221 21111111 11 0111111 22335666778899
Q ss_pred HHhcCCceeeeec-chhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhc
Q 017167 290 CIDRGGPVFVAVY-QPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLP 340 (376)
Q Consensus 290 al~~~~a~~~s~~-~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~ 340 (376)
.+.+.+-+.+.++ +.+.-+++++.++++.+|..+...++|+.+|+.|+.++
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 9999999999988 69999999999988777778989999999999999874
No 89
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.43 E-value=0.0034 Score=48.71 Aligned_cols=57 Identities=19% Similarity=0.278 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHhcCCceee-eecchhHHHHHHHHHHHHhCCccccccccchhhh
Q 017167 277 VVASGIAFAVQIWCIDRGGPVFV-AVYQPVQTLVVAIMASFALGEEFYLGGYVPATSP 333 (376)
Q Consensus 277 ~~~~~~~~~l~~~al~~~~a~~~-s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI 333 (376)
+.+.++++.++.+++|+.+.+.+ .+...+..+...+.+.+++||++++.+++|..+|
T Consensus 36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 33578899999999999998887 4556799999999999999999999999999875
No 90
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=96.36 E-value=0.22 Score=47.40 Aligned_cols=297 Identities=14% Similarity=0.057 Sum_probs=173.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhh-hcc----CCCCCHHHHHHHHHHHH
Q 017167 19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLE-KKE----RPAMTLNFALQFILLAL 93 (376)
Q Consensus 19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~-~~~----~~~~~~~~~~~~~~~g~ 93 (376)
-..|+++..++.++-|..++-.|...+ .+ +|..+.-..+-.-+..|+....- -++ ....+...+.+..+.|+
T Consensus 5 ii~Gii~h~iGg~~~~sfy~P~kkvk~--Ws-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~ 81 (344)
T PF06379_consen 5 IILGIIFHAIGGFASGSFYVPFKKVKG--WS-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV 81 (344)
T ss_pred HHHHHHHHHHHHHHhhhhccchhhcCC--cc-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence 467899999999999999999998654 33 44444444444444555543321 111 12345567778888888
Q ss_pred HHHHHHHHHHHHhcccCCccceeec-ccchhHHHHHHHHHHhhcc--ccccccCccceeehHhHHHHhHhhhhhccCCcc
Q 017167 94 VGITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEK--VRLDRKDGIAKVVGTLFCVAGATVITLYKGPTI 170 (376)
Q Consensus 94 ~~~~~~~~~~~~al~~~~~~~a~ii-~~~~Pl~~~lla~l~l~e~--~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~ 170 (376)
+- .++...|=.+++|++.+...-+ ..+..++-.++-.++.++- + .....+...++|++++++|+.+... .|...
T Consensus 82 lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l-~~~~~g~~vL~Gv~v~LiGIai~g~-AG~~K 158 (344)
T PF06379_consen 82 LW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDEL-LATPSGQIVLLGVAVCLIGIAICGK-AGSMK 158 (344)
T ss_pred HH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCccccc-ccCCCchhhhhHHHHHHHHHHHHhH-HHHhh
Confidence 86 7899999999999998876643 5566677777766664421 1 1111234678899999999999963 34322
Q ss_pred cCCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhh---h---hC-CCcc----hhHHHH
Q 017167 171 YSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVL---K---KY-PARL----SVTAYT 239 (376)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~---~---~~-~~~~----~~~~~~ 239 (376)
+...+. + ..+.+..+|+..++++++..+..++-..... + +. .++. ......
T Consensus 159 e~~~~~----------------~--~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv 220 (344)
T PF06379_consen 159 EKELGE----------------E--AKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVV 220 (344)
T ss_pred hhhhcc----------------c--hhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhh
Confidence 111000 0 0346677999999999998888776532211 0 00 0111 122223
Q ss_pred HHHHHHHHHHHHHHhh---cCc---ccccccCC---chhHHHHHHHHHHHHHHHHHHHHHHhcCCce----eeeecchhH
Q 017167 240 CFFGLIQFMIIAAIFE---RNL---DAWIFHNG---GEVFSILYAGVVASGIAFAVQIWCIDRGGPV----FVAVYQPVQ 306 (376)
Q Consensus 240 ~~~~~~~~~~~~~~~~---~~~---~~~~~~~~---~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~----~~s~~~~l~ 306 (376)
+.-|.+..+.+.++.. .+. .+.....+ .+...-++.|++ =...+.+|-.+-.+.++. --.+.+.+.
T Consensus 221 ~~GGf~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~l-Wy~qfffYg~G~s~lg~~~~~~sW~i~ma~~ 299 (344)
T PF06379_consen 221 LWGGFITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVL-WYSQFFFYGMGESKLGASGPFSSWAIHMALI 299 (344)
T ss_pred hhhHHHHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccccHHHHHHHHHH
Confidence 3344444454444321 111 11111111 233333444443 345566666666666643 233677788
Q ss_pred HHHHHHHHHHHhCCc------cccccccchhhhhhhhhhcc
Q 017167 307 TLVVAIMASFALGEE------FYLGGYVPATSPARSILLPN 341 (376)
Q Consensus 307 pv~a~l~~~l~l~e~------~~~~~~iG~~lI~~gi~l~~ 341 (376)
.+++-+.+.+ ++|- +-..-++|.++++.++.++-
T Consensus 300 vl~snvwGl~-lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG 339 (344)
T PF06379_consen 300 VLFSNVWGLI-LKEWKGASKKTIRVLVLGIAVLILSVVIVG 339 (344)
T ss_pred HHHHHHHHHH-HHHhccCCcccHHHHHHHHHHHHHHHHHHh
Confidence 8888888865 6664 22334678888888877754
No 91
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.32 E-value=0.013 Score=46.23 Aligned_cols=65 Identities=23% Similarity=0.205 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHhcccCCccceeec-ccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167 93 LVGITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (376)
Q Consensus 93 ~~~~~~~~~~~~~al~~~~~~~a~ii-~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~ 163 (376)
+.+..+++.+...|++++|.+.+-.+ ...-.+.+++.+++++||+++. .+++++.+.++|++.+-
T Consensus 37 ~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~------~~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 37 IVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSL------IKLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCH------HHHHHHHHHHHHHHHhh
Confidence 33356788889999999999888755 5678889999999999999999 69999999999999884
No 92
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.04 E-value=0.01 Score=47.08 Aligned_cols=65 Identities=11% Similarity=0.102 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHhcccCCccceeec-ccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167 93 LVGITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (376)
Q Consensus 93 ~~~~~~~~~~~~~al~~~~~~~a~ii-~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~ 163 (376)
+.+...++.+...++++.|.+.+-.+ ....-+.+++++++++||++++ .+++++.+.+.|++.+-
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~------~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASP------ARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHhhh
Confidence 33456788889999999999888766 4488889999999999999999 69999999999999884
No 93
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=95.66 E-value=0.0016 Score=58.63 Aligned_cols=145 Identities=16% Similarity=0.198 Sum_probs=98.5
Q ss_pred CcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 017167 9 STRRMCSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQF 88 (376)
Q Consensus 9 ~~~~~~~~~~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~ 88 (376)
++++.++.++-.+|...++.+.+.|-.+.+..+...-++.+...--..-++++++. +... +. .+...|..+.-
T Consensus 140 ~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~ali---~~~~---~~-~~~~~K~t~~n 212 (288)
T COG4975 140 NNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGALI---LGFF---KM-EKRFNKYTWLN 212 (288)
T ss_pred ccccccChHhhhhheeeeeeeccceeeeEeeeccccccchhhhhHHHHHHHHHHHH---Hhhc---cc-ccchHHHHHHH
Confidence 33444555666788888888888888777777654322344433333333333332 2211 21 22344555667
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167 89 ILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (376)
Q Consensus 89 ~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~ 163 (376)
+.-|+.. +.++.++++|-+..+.+.+=.+..+.-+...+-+.+++|||-+.|+.. .-++|+++.++|+.++.
T Consensus 213 ii~G~~W-a~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~--~v~iGiilivvgai~lg 284 (288)
T COG4975 213 IIPGLIW-AIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMV--YVIIGIILIVVGAILLG 284 (288)
T ss_pred HhhHHHH-HhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhh--hhhhhHHHHHHHhhhhh
Confidence 7778775 789999999999999999999999999999999999999998875322 44567777777777764
No 94
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=95.59 E-value=0.048 Score=50.24 Aligned_cols=196 Identities=11% Similarity=0.004 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017167 22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG 101 (376)
Q Consensus 22 g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 101 (376)
|++..+++.+++|.+.+-.|..- . -|++.+.++......+.-+.+....+ .++ ...+.++-|.+. +.++.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~-~-gDg~~fQw~~~~~i~~~g~~v~~~~~---~p~----f~p~amlgG~lW-~~gN~ 70 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFD-T-GDGFFFQWVMCSGIFLVGLVVNLILG---FPP----FYPWAMLGGALW-ATGNI 70 (254)
T ss_pred CchhHHHHHHHhcccceeeEecc-C-CCcHHHHHHHHHHHHHHHHHHHHhcC---CCc----ceeHHHhhhhhh-hcCce
Confidence 45678999999999999999753 3 57887777777666655555544422 222 223445555654 78899
Q ss_pred HHHHhcccCCccceeecccchhHHHH-HHHHH-HhhccccccccCccceeehHhHHHHhHhhhhhccCCcccC-----CC
Q 017167 102 FYLLGLENTSPTFASAIQNSVPAITF-LMAAI-FRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYS-----PA 174 (376)
Q Consensus 102 ~~~~al~~~~~~~a~ii~~~~Pl~~~-lla~l-~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~-----~~ 174 (376)
+-.-.++.++.+.+..+-.+.-+.+- ..+.+ +++++...- +...+.++|++++++|..+...-+.+..+. ++
T Consensus 71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~ 149 (254)
T PF07857_consen 71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET 149 (254)
T ss_pred eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence 99999999999999988776554443 33332 454443321 234578889999999988876433333111 11
Q ss_pred CCCCCCCCCCcc---hhhhccccC--CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 017167 175 PPLNQIQPDSLT---STIFLSLGD--AKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKK 228 (376)
Q Consensus 175 ~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~ 228 (376)
+...++.++..+ ++...+..+ +.......|..+++++++.|+...+=.....++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 150 PLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred ccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence 111111111000 111111110 011235679999999999999887766655444
No 95
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=95.56 E-value=0.25 Score=47.12 Aligned_cols=162 Identities=13% Similarity=0.072 Sum_probs=102.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhCC---CcchhHHHHHHHHHHHHHHHHHHhhcC--------cccccccCCchhHH
Q 017167 203 LGCVYLIGHCLSWSGWLVMQAPVLKKYP---ARLSVTAYTCFFGLIQFMIIAAIFERN--------LDAWIFHNGGEVFS 271 (376)
Q Consensus 203 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 271 (376)
.-.+..+...+.++......|...+... .+.+..+..-+.-.+......+.-+.. ...+....+.+..-
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 3444455555555555555555333221 344555555555555544444322101 00111112223333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcc---c-----c
Q 017167 272 ILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPN---R-----W 343 (376)
Q Consensus 272 ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~---~-----~ 343 (376)
+..-+++ .++-..+++.++.+.+|+...+...+....+.++..++++++.+..||...++...|+.+++ . +
T Consensus 95 ~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~ 173 (345)
T KOG2234|consen 95 VSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAK 173 (345)
T ss_pred HHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcc
Confidence 3333333 56666789999999999999999999999999999999999999999999999999999998 2 1
Q ss_pred -ccccchhhHHHHHHhHhhhccc
Q 017167 344 -MSTCMLSFWIQMFVCLTAICSG 365 (376)
Q Consensus 344 -~~~~~~~~~~~~~~~~~~~~~~ 365 (376)
....++..++=.-++.+..+||
T Consensus 174 ~~~~~~n~~~G~~avl~~c~~Sg 196 (345)
T KOG2234|consen 174 SESSAQNPFLGLVAVLVACFLSG 196 (345)
T ss_pred CCCcccchhhhHHHHHHHHHHHH
Confidence 3445666677666666666665
No 96
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.38 E-value=0.14 Score=47.88 Aligned_cols=140 Identities=13% Similarity=0.120 Sum_probs=112.7
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHhhhhccCC-----CCCHHHHHHHHH
Q 017167 17 PEKLQLHLAMVALQFGYAGFHVVSRAALNM-GISKLVFPVYRNIIAFLLLLPFAYFLEKKERP-----AMTLNFALQFIL 90 (376)
Q Consensus 17 ~~~~~g~~~~lla~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~ 90 (376)
.+...|++++.....+-|..+..-+.+++. ++++....+.-.+...+.-.......+ ..++ +..++-++-.++
T Consensus 168 ~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg-~~~~av~F~~~hp~~~~Di~l 246 (327)
T KOG1581|consen 168 ENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQG-HLLPAVSFIKEHPDVAFDILL 246 (327)
T ss_pred CCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCC-CCchHHHHHHcChhHHHHHHH
Confidence 467889999999999999988887777764 588888888888888877766654322 2111 334556677778
Q ss_pred HHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhh
Q 017167 91 LALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL 164 (376)
Q Consensus 91 ~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~ 164 (376)
...++ ++++.+.|+-++.-++-.-+.|+.+-=+++.+++-+.++.++++ .+|.|+.+.+.|..+=++
T Consensus 247 ~s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~------~q~~g~~iVFg~i~l~~~ 313 (327)
T KOG1581|consen 247 YSTCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSS------EQWLGVLIVFGGIFLEIL 313 (327)
T ss_pred HHHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccch------hhccCeeeehHHHHHHHH
Confidence 88887 68999999999999998888899999999999999999999999 699999999999887654
No 97
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.00 E-value=0.27 Score=44.32 Aligned_cols=139 Identities=14% Similarity=0.039 Sum_probs=97.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHhhhh-ccCC---CCCHHHHHHHHHHHH
Q 017167 19 KLQLHLAMVALQFGYAGFHVVSRAALNM-GISKLVFPVYRNIIAFLLLLPFAYFLEK-KERP---AMTLNFALQFILLAL 93 (376)
Q Consensus 19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~a~l~l~~~~~~~~~-~~~~---~~~~~~~~~~~~~g~ 93 (376)
-..|.++++++-.+-|.....-...-.+ .-+.....+.-.+.+.+.+-.-+.+.+. .+.. ..-+..++-+.++++
T Consensus 170 ~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai 249 (337)
T KOG1580|consen 170 FGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI 249 (337)
T ss_pred cchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH
Confidence 3567888888888888877665544332 1223344445555555444333222211 0000 001234566777888
Q ss_pred HHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhh
Q 017167 94 VGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL 164 (376)
Q Consensus 94 ~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~ 164 (376)
.+ ++++.+.|.-+.+.+|-..+++..+--.|+.+.+.++++.+++. ++|+|.++.+.|...=..
T Consensus 250 ~s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~------rQwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 250 AS-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSG------RQWLGTVLVFSALTADVV 313 (337)
T ss_pred HH-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcH------HHHHHHHHHHHHhhhHhh
Confidence 86 78999999999999999999999999999999999999999999 499999999998877653
No 98
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.71 E-value=0.17 Score=42.68 Aligned_cols=140 Identities=12% Similarity=0.036 Sum_probs=90.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 017167 19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA 98 (376)
Q Consensus 19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 98 (376)
.....++.+.+..+-.....+...+.+..-+|..-.+..+..+.+++..+.+..+++......++..+|...-|+++ ..
T Consensus 3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~ 81 (150)
T COG3238 3 MYLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AI 81 (150)
T ss_pred cHHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hh
Confidence 34566777788888888887777777642349999999999999998888887444333232344456677777776 44
Q ss_pred HHHHHHHhcccCCccceeec-ccchhHHHHHHHHH-HhhccccccccCccceeehHhHHHHhHhhh
Q 017167 99 NQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAI-FRIEKVRLDRKDGIAKVVGTLFCVAGATVI 162 (376)
Q Consensus 99 ~~~~~~~al~~~~~~~a~ii-~~~~Pl~~~lla~l-~l~e~~~~~~~~~~~~~igi~l~~~Gv~li 162 (376)
.-..-.....+++++....+ ..-+-+...++..+ +++++ +|..+..+++|+++.++|+.++
T Consensus 82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~---~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVP---KRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCC---cCCCCHHHHHHHHHHHHHHHHh
Confidence 55555566667766655543 44455555555442 22222 2334447999999999995554
No 99
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=94.71 E-value=0.09 Score=40.70 Aligned_cols=56 Identities=23% Similarity=0.190 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHhcccCCccceeec-ccchhHHHHHHHHHHhhccccccccCccceeehHhH
Q 017167 93 LVGITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLF 154 (376)
Q Consensus 93 ~~~~~~~~~~~~~al~~~~~~~a~ii-~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l 154 (376)
+.+..++..++..++++.|.+.+-.+ .....+.+.+.+.+++||+++. .++.|+.+
T Consensus 36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~------~~~~gi~l 92 (93)
T PF00893_consen 36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSL------SKWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHhheee
Confidence 33456788899999999999999766 4588999999999999999999 58888765
No 100
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=93.85 E-value=0.076 Score=47.92 Aligned_cols=136 Identities=7% Similarity=-0.017 Sum_probs=80.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHH-HHHHHHHHHHHHhhhhccCCCCC--HHHHHHHHHHHHH
Q 017167 18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRN-IIAFLLLLPFAYFLEKKERPAMT--LNFALQFILLALV 94 (376)
Q Consensus 18 ~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~-~~a~l~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~ 94 (376)
+...+....+.+.++-+...+..++..+++-.....-.+.. +.+.+.................+ .+.........+.
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLL 161 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHH
Confidence 34566676777777777888888877654211111111111 11111111111111110000000 0001112222233
Q ss_pred HHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHh
Q 017167 95 GITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGAT 160 (376)
Q Consensus 95 ~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~ 160 (376)
...+..+..+.+++.++...+....+.++++.+++.++++|+++. .++.|+.+.+.|+.
T Consensus 162 -~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~------~~~~g~~lV~~~~~ 220 (222)
T TIGR00803 162 -NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISS------TFYLGAILVFLATF 220 (222)
T ss_pred -HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccH------HHHHHHHHHHeeeE
Confidence 356777888999999999999999999999999999999999999 59999999888865
No 101
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=92.85 E-value=0.44 Score=43.94 Aligned_cols=142 Identities=18% Similarity=0.162 Sum_probs=103.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHhhhh----ccCCCC-CHHHHHHHHHHH
Q 017167 19 KLQLHLAMVALQFGYAGFHVVSRAALNM-GISKLVFPVYRNIIAFLLLLPFAYFLEK----KERPAM-TLNFALQFILLA 92 (376)
Q Consensus 19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~a~l~l~~~~~~~~~----~~~~~~-~~~~~~~~~~~g 92 (376)
.+.|.++.+++.+.-+...+..|..... +=--+.+.++..+.+.++++|.+...+. ...+.. ..+.|....+.|
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg 262 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG 262 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence 5789999999999999999999976543 2235678999999999999999987643 122233 566666677777
Q ss_pred HHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccC
Q 017167 93 LVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKG 167 (376)
Q Consensus 93 ~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~ 167 (376)
++++.++.. -.+-++-++|-+-.+-...-...-.+++..+++|..+. ..|.+-++.++|-..-..-++
T Consensus 263 lfgF~mgyv-Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~------lwwtsn~~vLvgs~~YT~vk~ 330 (347)
T KOG1442|consen 263 LFGFAMGYV-TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSG------LWWTSNIVVLVGSLAYTLVKE 330 (347)
T ss_pred HHHHHhhhe-eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhh------heeeeeEEEEehhHHHHHHHH
Confidence 887655443 23345556665444444455566688999999999998 688899999999888765443
No 102
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=92.57 E-value=0.6 Score=36.53 Aligned_cols=110 Identities=16% Similarity=0.276 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCch------HHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 017167 25 AMVALQFGYAGFHVVSRAALNMGISKL------VFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA 98 (376)
Q Consensus 25 ~~lla~~~~g~~~~~~k~~~~~~~~~~------~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 98 (376)
-++....+||..+++.|.... +++.. ...+.|-.... ..+++.+..++ ++ -.
T Consensus 7 ~lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~lqe~~tl----------------~l~w~Y~iPFl----lN-qc 64 (125)
T KOG4831|consen 7 KLVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIALQEMKTL----------------FLNWEYLIPFL----LN-QC 64 (125)
T ss_pred HHHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHHHHHHHHH----------------HHhHHHHHHHH----HH-Hh
Confidence 366778999999999998875 34322 12222222211 12233322222 12 24
Q ss_pred HHHHHHHhcccCCccceeeccc-chhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhh
Q 017167 99 NQGFYLLGLENTSPTFASAIQN-SVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVI 162 (376)
Q Consensus 99 ~~~~~~~al~~~~~~~a~ii~~-~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li 162 (376)
+..+||.-+++.+.+.++.+.+ +.-.|+++.+..+ +|+...+ ..++|..+.+.|..+.
T Consensus 65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~-----~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGG-----LALLGTSLIVFGIWLC 123 (125)
T ss_pred hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccc-----eeehhhhHHhhhhhhe
Confidence 5667889999999999998855 5567777777655 6666665 6899999999998775
No 103
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=92.53 E-value=1.3 Score=41.76 Aligned_cols=152 Identities=11% Similarity=0.050 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhCCCcchhHH--HHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHH
Q 017167 206 VYLIGHCLSWSGWLVMQAPVLKKYPARLSVTA--YTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIA 283 (376)
Q Consensus 206 ~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~ 283 (376)
.-++.=+++-..-.+..|..+.+++-+..... +|.+.+.+........---+.++.+......|..+- ++ ....
T Consensus 15 ~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~---~l-f~~~ 90 (314)
T KOG1444|consen 15 LSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVS---LL-FVGM 90 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHH---HH-HHHH
Confidence 33333344444455667887877764544444 888888777665544311122222222333343321 11 1222
Q ss_pred HHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccccccccchh--hHHHHHHhHhh
Q 017167 284 FAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWMSTCMLS--FWIQMFVCLTA 361 (376)
Q Consensus 284 ~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~~~~~~~~--~~~~~~~~~~~ 361 (376)
.+.=.+++|+++....+++....|+.+.+.+..++|-+++...+.....+++|.....-....-..- +|.++-..+++
T Consensus 91 i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a 170 (314)
T KOG1444|consen 91 LFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTA 170 (314)
T ss_pred HHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHH
Confidence 3344578999999999999999999999999999999999999999999999888865444444443 56665554443
No 104
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.28 E-value=0.11 Score=48.98 Aligned_cols=136 Identities=13% Similarity=0.112 Sum_probs=97.5
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHH
Q 017167 197 KGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAG 276 (376)
Q Consensus 197 ~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g 276 (376)
...++..|.++++.+++.-+....+.|+..++.. . . . .+.+....... .++ .-|.|
T Consensus 15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~-~-~----------------~--~ra~~gg~~yl-~~~---~Ww~G 70 (335)
T KOG2922|consen 15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAG-A-S----------------G--LRAGEGGYGYL-KEP---LWWAG 70 (335)
T ss_pred hccCceeeeeehhhccEEEeeehhhhHHHHHHHh-h-h----------------c--ccccCCCcchh-hhH---HHHHH
Confidence 3466789999999999999999999887766542 1 0 0 01111111111 112 22346
Q ss_pred HHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhc-cccccccchhhHHHH
Q 017167 277 VVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLP-NRWMSTCMLSFWIQM 355 (376)
Q Consensus 277 ~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~-~~~~~~~~~~~~~~~ 355 (376)
.+...++-..-+.+.-..+++.++.+..++.+...+++..+++|++++...+|+++.++|-.+. .-.+++.++-..-|+
T Consensus 71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el 150 (335)
T KOG2922|consen 71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEV 150 (335)
T ss_pred HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHH
Confidence 6667788888889999999999999999999999999999999999999999999998877664 334444444444444
Q ss_pred H
Q 017167 356 F 356 (376)
Q Consensus 356 ~ 356 (376)
.
T Consensus 151 ~ 151 (335)
T KOG2922|consen 151 W 151 (335)
T ss_pred H
Confidence 3
No 105
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=90.08 E-value=0.2 Score=43.88 Aligned_cols=76 Identities=12% Similarity=-0.006 Sum_probs=65.8
Q ss_pred HHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccccccccchhhHHHHHHh
Q 017167 283 AFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWMSTCMLSFWIQMFVC 358 (376)
Q Consensus 283 ~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~~~~~~~~~~~~~~~~ 358 (376)
+.+.|..++++++|+.++.+...+-.+..+++++++++++...+++...+.+.|++....-..+.+.+.-+-+++.
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~e~iGi~~AV 141 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHADEIIGIACAV 141 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhhhhhhHHHHH
Confidence 4678999999999999999999999999999999999999999999999999999998765556666655555544
No 106
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=86.82 E-value=2.2 Score=40.07 Aligned_cols=146 Identities=10% Similarity=0.056 Sum_probs=100.7
Q ss_pred HHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHH----HHHHHHHHHHHHHHHHHHHHhcC
Q 017167 219 LVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFS----ILYAGVVASGIAFAVQIWCIDRG 294 (376)
Q Consensus 219 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----ll~~g~~~~~~~~~l~~~al~~~ 294 (376)
..+.++..++++-|+.++.+++..-.+.....-...+..... ..++..|.. +.-.|+ ++++=..+-++++++.
T Consensus 32 tf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r--~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yV 108 (349)
T KOG1443|consen 32 TFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPR--ARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYV 108 (349)
T ss_pred HHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCc--cccCCcHHHHHHHhhhhhh-hhhcccccccceeeee
Confidence 344555555665577777777766655554444433322111 112233332 234455 3677778889999999
Q ss_pred CceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccccccccchhhHHHHHHhHhhhcccccee
Q 017167 295 GPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWMSTCMLSFWIQMFVCLTAICSGPQFT 369 (376)
Q Consensus 295 ~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (376)
+.+.-++.-...+++.++++.++-=|++++.-..=..+|.+|+++..-| ..|--.-+=.++..+..|+|=..+
T Consensus 109 tlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~K--sTqf~i~Gf~lv~~aS~~sGlRW~ 181 (349)
T KOG1443|consen 109 TLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYK--STQFNIEGFFLVLAASLLSGLRWA 181 (349)
T ss_pred eeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEec--ccceeehhHHHHHHHHHhhhhhHH
Confidence 9999999999999999999999999999999998888999999987533 334555566777778888885443
No 107
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=80.13 E-value=5 Score=38.46 Aligned_cols=140 Identities=11% Similarity=0.034 Sum_probs=87.4
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhh-cC-cccccccCCchhHHHHHHH
Q 017167 199 KNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFE-RN-LDAWIFHNGGEVFSILYAG 276 (376)
Q Consensus 199 ~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~ll~~g 276 (376)
.+...|+++..+++++.+.+.+=.|| .|+++ -++.-..+.+++.+..-+...... ++ .+.....+...+....+.|
T Consensus 3 ~~ii~Gii~h~iGg~~~~sfy~P~kk-vk~Ws-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G 80 (344)
T PF06379_consen 3 SAIILGIIFHAIGGFASGSFYVPFKK-VKGWS-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG 80 (344)
T ss_pred chHHHHHHHHHHHHHHhhhhccchhh-cCCcc-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence 44678999999999999998888777 45662 444444455554444322222211 11 1112223344555666667
Q ss_pred HHHHHHHHHHHHHHHhcCCceee-eecchhHHHHHHHHHHHHhC-------Cccccccccchhhhhhhhhhcc
Q 017167 277 VVASGIAFAVQIWCIDRGGPVFV-AVYQPVQTLVVAIMASFALG-------EEFYLGGYVPATSPARSILLPN 341 (376)
Q Consensus 277 ~~~~~~~~~l~~~al~~~~a~~~-s~~~~l~pv~a~l~~~l~l~-------e~~~~~~~iG~~lI~~gi~l~~ 341 (376)
++ =.++-..|-.++||++.+.. ++..-+..+++.++--++.| ++-....++|.++.++|+.+..
T Consensus 81 ~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g 152 (344)
T PF06379_consen 81 VL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICG 152 (344)
T ss_pred HH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHh
Confidence 76 67888889999999987543 34445555555555545433 2234567899999999999975
No 108
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=80.04 E-value=4 Score=36.71 Aligned_cols=137 Identities=15% Similarity=0.185 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHhhhhccCC----CCCHHHHHHHHHHHHHHH
Q 017167 22 LHLAMVALQFGYAGFHVVSRAALNM-GISKLVFPVYRNIIAFLLLLPFAYFLEKKERP----AMTLNFALQFILLALVGI 96 (376)
Q Consensus 22 g~~~~lla~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~ 96 (376)
|++.+..-.+.-+..-...|.-.+. ++.-++..++..+++..++..+....+..+.. ..+.....+..+.|+...
T Consensus 156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~sv 235 (309)
T COG5070 156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSV 235 (309)
T ss_pred ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHh
Confidence 5555665555555666666655442 46678899999999999998888766533221 334445567777787764
Q ss_pred HHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhc
Q 017167 97 TANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLY 165 (376)
Q Consensus 97 ~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~ 165 (376)
+ -..+--+.++-++.+.-+....+.-.-.++-+.++++|+.+. ..+.++++++....+-+..
T Consensus 236 g-iSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf------~si~sillGflsg~iYava 297 (309)
T COG5070 236 G-ISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNF------LSIFSILLGFLSGAIYAVA 297 (309)
T ss_pred h-hhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhH------HHHHHHHHHHHHHHHHHHH
Confidence 3 344566778888988888888888888999999999999999 6888999888877766543
No 109
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=79.03 E-value=6.2 Score=36.57 Aligned_cols=140 Identities=16% Similarity=0.098 Sum_probs=96.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCchHHHHHHHHHHHHHHHHHHHhhhhc--cC---CCCCHHHHHHHHHHHH
Q 017167 20 LQLHLAMVALQFGYAGFHVVSRAAL-NMGISKLVFPVYRNIIAFLLLLPFAYFLEKK--ER---PAMTLNFALQFILLAL 93 (376)
Q Consensus 20 ~~g~~~~lla~~~~g~~~~~~k~~~-~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~--~~---~~~~~~~~~~~~~~g~ 93 (376)
..|+.+.-.+-+.-+...=.-...+ .++-+..+.+++...++++.++..+.....- .+ .+.+.+......+.+.
T Consensus 189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~ 268 (367)
T KOG1582|consen 189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL 268 (367)
T ss_pred eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH
Confidence 3455544444444444322222222 2346678899999999998888777654321 11 1445666677777777
Q ss_pred HHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhcc
Q 017167 94 VGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYK 166 (376)
Q Consensus 94 ~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~ 166 (376)
.+ .++..+...=++..++..++.+...---.|.+++++++-++++.. -..+.++.+.|+.+=.+.+
T Consensus 269 ~g-ylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~q------y~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 269 AG-YLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQ------YVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred Hh-HhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHH------HhhhhHHHHHHHHhhcccC
Confidence 76 466766666677888888888888888999999999999999994 6678888899998876443
No 110
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=78.64 E-value=2.5 Score=38.78 Aligned_cols=135 Identities=7% Similarity=0.005 Sum_probs=87.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHH-HHHHHHHHHHHHH
Q 017167 18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLN-FALQFILLALVGI 96 (376)
Q Consensus 18 ~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~ 96 (376)
|..+|-+++++++.+++.+++.=.+..++ .+..++...-.+++.++-..-.+.. +++...+.|. ....++. ..+.+
T Consensus 163 np~~GD~lvi~GATlYaVSNv~EEflvkn-~d~~elm~~lgLfGaIIsaIQ~i~~-~~~~~tl~w~~~i~~yl~-f~L~M 239 (336)
T KOG2766|consen 163 NPVKGDFLVIAGATLYAVSNVSEEFLVKN-ADRVELMGFLGLFGAIISAIQFIFE-RHHVSTLHWDSAIFLYLR-FALTM 239 (336)
T ss_pred CCccCcEEEEecceeeeeccccHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHhhh-ccceeeEeehHHHHHHHH-HHHHH
Confidence 34567789999999999999999999984 9999999999999988877775443 3333223332 1122222 22222
Q ss_pred HHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167 97 TANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (376)
Q Consensus 97 ~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~ 163 (376)
++.+.+.=.-++..+++...+-.-+.-.+..++ ..++-++.| .-.++......|.++-.
T Consensus 240 FllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~w------LY~laF~~i~~GliiYs 298 (336)
T KOG2766|consen 240 FLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDW------LYFLAFATIATGLIIYS 298 (336)
T ss_pred HHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhh------hhHHHHHHHHHhhEEee
Confidence 222322333345555555555455666777766 455666888 68888888888887765
No 111
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=78.50 E-value=0.66 Score=42.82 Aligned_cols=75 Identities=5% Similarity=0.033 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh-cccCCccceeecccchh-HHHHHHHHHHhhccccccccCccceeehHhHHHHhHhh
Q 017167 84 FALQFILLALVGITANQGFYLLG-LENTSPTFASAIQNSVP-AITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATV 161 (376)
Q Consensus 84 ~~~~~~~~g~~~~~~~~~~~~~a-l~~~~~~~a~ii~~~~P-l~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~l 161 (376)
+.-..+..|.+...+...+|++= ++-.+-+..+++++..- +++.++-..+||+|+--- ...+.+++.++-..+
T Consensus 20 ~~~a~l~~~~llll~ail~w~~iimsd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCP-----LGlLCiilimi~lLv 94 (381)
T PF05297_consen 20 QPHASLLFGLLLLLVAILVWFFIIMSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCP-----LGLLCIILIMIVLLV 94 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCc-----chHHHHHHHHHHHHH
Confidence 33444444443333333333332 33333333344444333 333344444556554332 455555555544444
Q ss_pred hh
Q 017167 162 IT 163 (376)
Q Consensus 162 i~ 163 (376)
.+
T Consensus 95 ~~ 96 (381)
T PF05297_consen 95 SM 96 (381)
T ss_dssp --
T ss_pred HH
Confidence 43
No 112
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=68.20 E-value=76 Score=28.17 Aligned_cols=49 Identities=10% Similarity=0.086 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhh
Q 017167 83 NFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRI 135 (376)
Q Consensus 83 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~ 135 (376)
+.+++.+..++.. .+.+...+...+.+++...-. +.|....+++.+.+.
T Consensus 144 ~~~~k~~~~~~~~-~~~w~~~~~~~~~lp~~inp~---l~~~~~iiig~i~~~ 192 (206)
T PF06570_consen 144 PSWWKYILISVLA-MVLWIVIFVLTSFLPPVINPV---LPPWVYIIIGVIAFA 192 (206)
T ss_pred cHHHHHHHHHHHH-HHHHHHHHHHHHHccccCCcC---CCHHHHHHHHHHHHH
Confidence 3444555545443 345555555555566543222 345555555554443
No 113
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=67.32 E-value=8.1 Score=36.41 Aligned_cols=130 Identities=10% Similarity=-0.018 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhc------cC-------CCCCHHHHHHHHHHH
Q 017167 26 MVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKK------ER-------PAMTLNFALQFILLA 92 (376)
Q Consensus 26 ~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~------~~-------~~~~~~~~~~~~~~g 92 (376)
|+++.+|||......|++.++ ....+...+-+.++.++...+..+.-.. +. .+-++..+...+.-|
T Consensus 1 M~itmlcwGSW~nt~kL~~r~-gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAERR-GRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHHHhc-CCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 467889999999999998775 3333446666666666555555332111 11 133455555555555
Q ss_pred HHHHHHHHHHHHHhcccCCccceeecccchh-HHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhh
Q 017167 93 LVGITANQGFYLLGLENTSPTFASAIQNSVP-AITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVI 162 (376)
Q Consensus 93 ~~~~~~~~~~~~~al~~~~~~~a~ii~~~~P-l~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li 162 (376)
++ ..+++.+..+|+...+.+.+-++..... +.-+++.++ +..|.+.- ..-..|+.+.++.+++=
T Consensus 80 vv-fnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a----~iLF~GV~cf~iAI~lg 144 (336)
T PF07168_consen 80 VV-FNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRA----EILFPGVACFLIAIILG 144 (336)
T ss_pred Hh-hhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCc----eEEEccHHHHHHHHHHH
Confidence 55 5789999999999999888887754333 333444433 34554430 02334666555555543
No 114
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=66.53 E-value=3.7 Score=38.23 Aligned_cols=63 Identities=3% Similarity=0.010 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcc
Q 017167 279 ASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPN 341 (376)
Q Consensus 279 ~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~ 341 (376)
+-..+-.+.+.++...+++...++.....+++-+++.-+++..++..||+|...+..|++.+.
T Consensus 95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg 157 (372)
T KOG3912|consen 95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVG 157 (372)
T ss_pred HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheee
Confidence 356666778889999999998899999999999999999999999999999999999999874
No 115
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=65.60 E-value=3.2 Score=32.57 Aligned_cols=34 Identities=21% Similarity=0.136 Sum_probs=28.6
Q ss_pred HHHHHHHHHhCCccccccccchhhhhhhhhhccc
Q 017167 309 VVAIMASFALGEEFYLGGYVPATSPARSILLPNR 342 (376)
Q Consensus 309 ~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~ 342 (376)
+-..++.++++|++++..+.|.++++++++...|
T Consensus 75 vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fiFr 108 (108)
T PF04342_consen 75 VFAPFSVFYLGEPLKWNYLWAFLCILGAVYFIFR 108 (108)
T ss_pred eeHHHHHHHhCCCccHHHHHHHHHHHHhhheeeC
Confidence 3345778899999999999999999999887643
No 116
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=57.75 E-value=5.5 Score=36.77 Aligned_cols=126 Identities=12% Similarity=0.025 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHH
Q 017167 204 GCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIA 283 (376)
Q Consensus 204 G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~ 283 (376)
|.+..+.|+++++...+=.||.-.+ |++....+++....+......++.+. + .+ ..+-.+.|.+ -+.+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~-p-~f-------~p~amlgG~l-W~~g 68 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGF-P-PF-------YPWAMLGGAL-WATG 68 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCC-C-cc-------eeHHHhhhhh-hhcC
Confidence 5567788999999888875554322 55555555544444444444443221 1 11 1111222222 2333
Q ss_pred HHHHHHHHhcCCceeee-ecchhHHHHHHHHHHH-HhCCc-----cccccccchhhhhhhhhhcc
Q 017167 284 FAVQIWCIDRGGPVFVA-VYQPVQTLVVAIMASF-ALGEE-----FYLGGYVPATSPARSILLPN 341 (376)
Q Consensus 284 ~~l~~~al~~~~a~~~s-~~~~l~pv~a~l~~~l-~l~e~-----~~~~~~iG~~lI~~gi~l~~ 341 (376)
..+-.-.+|.++-...- +-+..+.+.+-..+.+ +||++ -.+..++|.+++++|..+..
T Consensus 69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~ 133 (254)
T PF07857_consen 69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFS 133 (254)
T ss_pred ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHhee
Confidence 33334444444433222 2233455556555544 45544 34566799999988888754
No 117
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=55.82 E-value=35 Score=26.95 Aligned_cols=58 Identities=16% Similarity=0.014 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhcCCceeeeec-chhHHHHHHHHHHHHhCCc-cccccccchhhhhhhhhhc
Q 017167 282 IAFAVQIWCIDRGGPVFVAVY-QPVQTLVVAIMASFALGEE-FYLGGYVPATSPARSILLP 340 (376)
Q Consensus 282 ~~~~l~~~al~~~~a~~~s~~-~~l~pv~a~l~~~l~l~e~-~~~~~~iG~~lI~~gi~l~ 340 (376)
-+-.+|+.-+.+.+-+.+..+ +.+.-.++.+.+.. +||+ ..-..++|..+++.|+.+.
T Consensus 64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~-LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKA-LGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHH-hccccccceeehhhhHHhhhhhhe
Confidence 344567788888888777655 55677888889986 5555 7777889999999999875
No 118
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=55.30 E-value=10 Score=29.34 Aligned_cols=34 Identities=12% Similarity=0.017 Sum_probs=29.6
Q ss_pred HHHHHHHHHhCCccccccccchhhhhhhhhhccc
Q 017167 309 VVAIMASFALGEEFYLGGYVPATSPARSILLPNR 342 (376)
Q Consensus 309 ~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~ 342 (376)
+-+.++.+.++|++.+..+.|..++++|+.+..|
T Consensus 82 iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 82 IFVPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 3445888999999999999999999999988765
No 119
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=51.42 E-value=2.2e+02 Score=26.87 Aligned_cols=135 Identities=14% Similarity=0.085 Sum_probs=87.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHH--hhh-----hcc---CC---CCCHHH
Q 017167 19 KLQLHLAMVALQFGYAGFHVVSRAALNM-GISKLVFPVYRNIIAFLLLLPFAY--FLE-----KKE---RP---AMTLNF 84 (376)
Q Consensus 19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~a~l~l~~~~~--~~~-----~~~---~~---~~~~~~ 84 (376)
-..|+.++.++.+.-+...+.-....++ |-++-+..++..++....++...- +.+ +.+ .+ ..-+..
T Consensus 162 w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~ 241 (330)
T KOG1583|consen 162 WLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSM 241 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHH
Confidence 4567777788888877777777766654 678899999999888766554321 000 011 00 011223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccc----CCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHh
Q 017167 85 ALQFILLALVGITANQGFYLLGLEN----TSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGAT 160 (376)
Q Consensus 85 ~~~~~~~g~~~~~~~~~~~~~al~~----~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~ 160 (376)
|..++.. ++.+.+-.-++.. +++-+.++....-=.+..+++.++++.++++ ..|+|..+.+.|..
T Consensus 242 ~~yLl~n-----~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~------~h~lGa~lVF~Gt~ 310 (330)
T KOG1583|consen 242 WVYLLFN-----VLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTP------WHWLGAALVFFGTL 310 (330)
T ss_pred HHHHHHH-----HHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCH------HHHHHHHHHHHHHH
Confidence 3333222 2333333333322 3444666777788889999999999999999 69999999999999
Q ss_pred hhhh
Q 017167 161 VITL 164 (376)
Q Consensus 161 li~~ 164 (376)
+.+.
T Consensus 311 ~fa~ 314 (330)
T KOG1583|consen 311 LFAN 314 (330)
T ss_pred HHHH
Confidence 9874
No 120
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=47.76 E-value=42 Score=26.48 Aligned_cols=29 Identities=7% Similarity=0.062 Sum_probs=20.8
Q ss_pred HHHHHHHhhccccccccCccceeehHhHHHHhHhh
Q 017167 127 FLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATV 161 (376)
Q Consensus 127 ~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~l 161 (376)
+.++.+++||+++++ ...|.++.+.++..
T Consensus 77 ~~Fsv~~l~E~l~~n------~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEPLKWN------YLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCCccHH------HHHHHHHHHHhhhe
Confidence 567789999999994 66666665555443
No 121
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=47.56 E-value=18 Score=34.13 Aligned_cols=129 Identities=13% Similarity=0.068 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcc-----------cccccCCchhHHHHHHHH
Q 017167 209 IGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLD-----------AWIFHNGGEVFSILYAGV 277 (376)
Q Consensus 209 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ll~~g~ 277 (376)
+++.+||+.+-..+|..-|+.. ......|=+.++.++...+..++-+... +....+...+...+..|+
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR-~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv 80 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGR-LPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV 80 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCC-ccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence 5678899999998888766552 2234566666666554443333211111 111223344555566666
Q ss_pred HHHHHHHHHHHHHHhcCCceeeeecc-hhHHHHHHHHHHHHhCCccc--cccccchhhhhhhhhhc
Q 017167 278 VASGIAFAVQIWCIDRGGPVFVAVYQ-PVQTLVVAIMASFALGEEFY--LGGYVPATSPARSILLP 340 (376)
Q Consensus 278 ~~~~~~~~l~~~al~~~~a~~~s~~~-~l~pv~a~l~~~l~l~e~~~--~~~~iG~~lI~~gi~l~ 340 (376)
+ .-++..+..+++...+.+..-++. .+..|++..+.++ ++.+.+ ..-+.|.+++++++++-
T Consensus 81 v-fnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lg 144 (336)
T PF07168_consen 81 V-FNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILG 144 (336)
T ss_pred h-hhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHH
Confidence 5 678888888999998877666543 3344556666664 345443 35567888888888774
No 122
>PF08119 Toxin_31: Scorpion acidic alpha-KTx toxin family; InterPro: IPR012635 This entry represents proteins that are acidic alpha-KTx short chain scorpion toxins. These toxins are named parabutoxins, that binds and inhibit voltage-sensitive potassium channels and inhibit the vertebrate potassium channel Kv1.1 with low affinity. Furthermore, they lack the crucial pore-plugging lysine. In addition, the second important residue of the dyad, the hydrophobic residue (Phe or Tyr) is also missing [].; GO: 0019870 potassium channel inhibitor activity, 0009405 pathogenesis, 0005576 extracellular region
Probab=46.61 E-value=7.2 Score=23.30 Aligned_cols=10 Identities=50% Similarity=0.986 Sum_probs=8.2
Q ss_pred Hhhhccccce
Q 017167 359 LTAICSGPQF 368 (376)
Q Consensus 359 ~~~~~~~~~~ 368 (376)
+|.+|.|||-
T Consensus 23 stgvcdgpqk 32 (37)
T PF08119_consen 23 STGVCDGPQK 32 (37)
T ss_pred ccccccCCcc
Confidence 6889999983
No 123
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=44.80 E-value=20 Score=28.30 Aligned_cols=37 Identities=5% Similarity=-0.152 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHhCCccccccccchhhhhhhhhhccc
Q 017167 306 QTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNR 342 (376)
Q Consensus 306 ~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~ 342 (376)
-.+.+++.++.+-+++|+...++|.++.+.|+.+..-
T Consensus 67 fI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 67 FIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred HHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 3467788899999999999999999999999887653
No 124
>PRK02237 hypothetical protein; Provisional
Probab=44.29 E-value=23 Score=28.07 Aligned_cols=38 Identities=8% Similarity=-0.185 Sum_probs=32.0
Q ss_pred hhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcc
Q 017167 304 PVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPN 341 (376)
Q Consensus 304 ~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~ 341 (376)
-.-.+.+++.++.+-|++|+...++|.++.++|+.+..
T Consensus 67 GvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 67 GVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIM 104 (109)
T ss_pred hHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhe
Confidence 34456778889999999999999999999999987653
No 125
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=41.32 E-value=93 Score=27.27 Aligned_cols=25 Identities=12% Similarity=0.212 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC
Q 017167 270 FSILYAGVVASGIAFAVQIWCIDRG 294 (376)
Q Consensus 270 ~~ll~~g~~~~~~~~~l~~~al~~~ 294 (376)
..++..|++++..-|.+|+++.++-
T Consensus 128 Itlll~a~vgGfamy~my~y~yr~~ 152 (226)
T COG4858 128 ITLLLTAVVGGFAMYIMYYYAYRMR 152 (226)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 3344444444444444444444443
No 126
>PF10101 DUF2339: Predicted membrane protein (DUF2339); InterPro: IPR019286 This entry, found in various hypothetical bacterial proteins, has no known function.
Probab=41.01 E-value=4.8e+02 Score=27.89 Aligned_cols=58 Identities=9% Similarity=-0.091 Sum_probs=33.2
Q ss_pred eecchhHHHHHHHHHHHHhCCc--cccccccchhhhhhhhhhccccccccchhhHHHHHH
Q 017167 300 AVYQPVQTLVVAIMASFALGEE--FYLGGYVPATSPARSILLPNRWMSTCMLSFWIQMFV 357 (376)
Q Consensus 300 s~~~~l~pv~a~l~~~l~l~e~--~~~~~~iG~~lI~~gi~l~~~~~~~~~~~~~~~~~~ 357 (376)
.......|+.....+....++. .....-++.+.+..+.....+|+++.+.+.+.+.+.
T Consensus 226 ~~l~~~~~l~~~~l~~~l~~~~~~~~~~~al~~a~i~l~l~~~l~r~~~~~~~~l~~~~~ 285 (745)
T PF10101_consen 226 SALLFANPLLAFGLAASLLHNQEQGPAWSALGLAAIYLALAVWLRRRRRLRDRLLAALFL 285 (745)
T ss_pred HHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhHHHHHH
Confidence 5566677888888887777732 222222566566666554444443555555555543
No 127
>PF15108 TMEM37: Voltage-dependent calcium channel gamma-like subunit protein family
Probab=34.17 E-value=1.1e+02 Score=26.01 Aligned_cols=81 Identities=14% Similarity=0.218 Sum_probs=52.6
Q ss_pred eeehHhHHHHhHhhhhhccCCcccCCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 017167 148 KVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLK 227 (376)
Q Consensus 148 ~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~ 227 (376)
.-.+++.++.|.=+++..+--+..+ ....|.+|..+.+.+-+..+.+..-.--+.+
T Consensus 91 ~slAVV~AIFGLElLmvSQvcEd~~------------------------SrrKWamGs~LlLvsfvlSs~GllsFviLL~ 146 (184)
T PF15108_consen 91 GSLAVVVAIFGLELLMVSQVCEDAH------------------------SRRKWAMGSVLLLVSFVLSSGGLLSFVILLR 146 (184)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcch------------------------hhhhhhhhhHHHHHHHHHhcccHHHHHHHHh
Confidence 4457778888887776532211100 3466889999998888877766655555566
Q ss_pred hCC--CcchhHHHHHHHHHHHHHHHHH
Q 017167 228 KYP--ARLSVTAYTCFFGLIQFMIIAA 252 (376)
Q Consensus 228 ~~~--~~~~~~~~~~~~~~~~~~~~~~ 252 (376)
+.. ..++.++|.-+.+.++++.-++
T Consensus 147 ~~vtl~GFTL~fWCeFtAsFLfFLN~i 173 (184)
T PF15108_consen 147 NQVTLIGFTLMFWCEFTASFLFFLNGI 173 (184)
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHhhh
Confidence 543 3567788888887777665443
No 128
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=33.75 E-value=3.3e+02 Score=23.95 Aligned_cols=113 Identities=10% Similarity=0.087 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017167 23 HLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLE-KKERPAMTLNFALQFILLALVGITANQG 101 (376)
Q Consensus 23 ~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 101 (376)
.++.-+-+.+-|.+..+.+.+. ..+-..++..-...++.....+.+.++ +.+. -.|..+++.+...... .+-+.
T Consensus 102 Ll~lg~~aLlsgitaff~~nA~--~~GlItlll~a~vgGfamy~my~y~yr~~ad~--sqr~~~~K~~lv~~~s-m~lWi 176 (226)
T COG4858 102 LLFLGAMALLSGITAFFQKNAQ--VYGLITLLLTAVVGGFAMYIMYYYAYRMRADN--SQRPGTWKYLLVAVLS-MLLWI 176 (226)
T ss_pred HHHHHHHHHHHHHHHHHhcCCc--chhHHHHHHHHHhhhHHHHHHHHHHHHhhccc--ccCCchHHHHHHHHHH-HHHHH
Confidence 3444444566677777766532 233333333333333333333322222 2221 1222334444444443 34555
Q ss_pred HHHHhcccCCccceeecccchhHHHHHHHHHHhhcccccccc
Q 017167 102 FYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRK 143 (376)
Q Consensus 102 ~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~ 143 (376)
+.+.+-..+|++.-- .+-|+--.+++.+.+.-|.-.+||
T Consensus 177 ~v~i~t~~lPtslN~---~L~pi~l~IiGav~lalRfylkkk 215 (226)
T COG4858 177 AVMIATVFLPTSLNP---QLPPIALTIIGAVILALRFYLKKK 215 (226)
T ss_pred HHHHHHhhCCCcCCc---CCchHHHHHHHHHHHHHHHHHHHh
Confidence 666777777765322 345555566665554444444333
No 129
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=32.14 E-value=1.9e+02 Score=24.78 Aligned_cols=54 Identities=20% Similarity=0.243 Sum_probs=38.0
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhhh-----hCCCcchhHHHHHHHHHHHHHHHHH
Q 017167 199 KNWTLGCVYLIGHCLSWSGWLVMQAPVLK-----KYPARLSVTAYTCFFGLIQFMIIAA 252 (376)
Q Consensus 199 ~~~~~G~~l~l~a~~~~a~~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (376)
.+.....+.++.+++.+++.+++-....+ +.|.|..-..+.+..+.++.+.+..
T Consensus 128 ~~f~qsv~~gf~a~lGfslvmvlfA~iRER~~~advP~~frG~~ialitagLmSlaFmg 186 (193)
T COG4657 128 HNFLQSVVYGFGAALGFSLVMVLFAAIRERLALADVPAPFRGAAIALITAGLMSLAFMG 186 (193)
T ss_pred hhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHcC
Confidence 44667888999999999998887655433 3456666677777777776665544
No 130
>COG1968 BacA Undecaprenyl pyrophosphate phosphatase [Lipid transport and metabolism]
Probab=31.60 E-value=4.4e+02 Score=24.65 Aligned_cols=89 Identities=10% Similarity=0.067 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017167 21 QLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQ 100 (376)
Q Consensus 21 ~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 100 (376)
+-.+..+++++--+...+..+...++.+-....+.+-.++..+++...-...++.+.+..+.-.++-.+..|++. ++.
T Consensus 85 ~l~l~ilvatiPa~v~Gl~~~d~i~~~l~~~~~va~~lIv~gi~li~~e~~~~~~~~~~~~~l~~~da~~IGlaQ-~lA- 162 (270)
T COG1968 85 RLWLKILVATIPAVVLGLLFKDFIKSHLFNPRVVAIALIVGGILLILAEKLNKKPRLRDLDDLTLRDALIIGLAQ-CLA- 162 (270)
T ss_pred HHHHHHHHHHHhHHHhhHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHhccccCcCChhhCCHHHHHHHHHHH-HHH-
Confidence 345667777777777777777766654444666666666666666555544332112222222344456666654 222
Q ss_pred HHHHHhcccCCcc
Q 017167 101 GFYLLGLENTSPT 113 (376)
Q Consensus 101 ~~~~~al~~~~~~ 113 (376)
..=+.++-+++
T Consensus 163 --l~PG~SRSGaT 173 (270)
T COG1968 163 --LIPGTSRSGAT 173 (270)
T ss_pred --HcCCCCccHHH
Confidence 23556666554
No 131
>PF09945 DUF2177: Predicted membrane protein (DUF2177); InterPro: IPR018687 This family of putative membrane proteins has no known function.
Probab=30.87 E-value=2.7e+02 Score=22.83 Aligned_cols=42 Identities=17% Similarity=0.233 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHH
Q 017167 206 VYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMI 249 (376)
Q Consensus 206 ~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (376)
--++++.++|+.|..-+-...|+++ ..+...=...|+++...
T Consensus 79 ~GallGl~~YgtYdlTN~Atlk~W~--~~~~liD~~WG~~lt~~ 120 (128)
T PF09945_consen 79 YGALLGLFAYGTYDLTNLATLKDWP--LKVTLIDIAWGTFLTAL 120 (128)
T ss_pred HHHHHHHHHHHHHHHHhHHHHCCCC--ccHHHHHHhHHHHHHHH
Confidence 3458888999999999988899984 45555555555555443
No 132
>PF15111 TMEM101: TMEM101 protein family
Probab=26.05 E-value=5.1e+02 Score=23.66 Aligned_cols=41 Identities=17% Similarity=0.259 Sum_probs=29.4
Q ss_pred cchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhh
Q 017167 120 NSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVI 162 (376)
Q Consensus 120 ~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li 162 (376)
.=.|.|-.+.-...+.||...+|||.+.... +-.-.|+.++
T Consensus 19 tR~pf~~~f~llM~~aeRA~~~r~pdi~~P~--vY~~~gv~vl 59 (251)
T PF15111_consen 19 TRYPFWQCFCLLMWLAERADSKRKPDIEVPY--VYVDMGVAVL 59 (251)
T ss_pred HhhhHHHHHHHHHHHhhhhhhccCCCCCCCE--eehhHHHHHH
Confidence 3457888888888899999999998877763 2334444444
No 133
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.68 E-value=3.6e+02 Score=21.07 Aligned_cols=30 Identities=13% Similarity=0.183 Sum_probs=22.8
Q ss_pred HHHHHHHhhccccccccCccceeehHhHHHHhHhhh
Q 017167 127 FLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVI 162 (376)
Q Consensus 127 ~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li 162 (376)
+.++.+++||++++ ..+.+..+...|+..+
T Consensus 84 v~Fsvfyl~epl~~------~~l~a~~~i~gav~fi 113 (116)
T COG3169 84 VPFSVFYLKEPLRW------NYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHcCcchH------HHHHHHHHHHHHHHHh
Confidence 55688999999999 4777777666666655
No 134
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=22.90 E-value=1.9e+02 Score=24.21 Aligned_cols=30 Identities=7% Similarity=0.034 Sum_probs=24.3
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 017167 199 KNWTLGCVYLIGHCLSWSGWLVMQAPVLKK 228 (376)
Q Consensus 199 ~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~ 228 (376)
.+.....+..++++..|.-|...+||+.+.
T Consensus 117 ~~~i~~l~~~li~a~IwipYf~~S~RVK~T 146 (149)
T PF10754_consen 117 AEAIRELLRSLIAAAIWIPYFLRSKRVKNT 146 (149)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHhhhh
Confidence 334568888999999999999999886543
No 135
>PRK02237 hypothetical protein; Provisional
Probab=21.31 E-value=80 Score=25.03 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167 124 AITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (376)
Q Consensus 124 l~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~ 163 (376)
+...+-.+.+-|+|++. .+++|..++++|+.++.
T Consensus 71 ~~Sl~W~w~vdg~~Pd~------~D~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 71 AGSLLWLWVVDGVRPDR------WDWIGAAICLVGMAVIM 104 (109)
T ss_pred HHHHHHHHHhcCcCCCh------hHHHhHHHHHHhHHHhe
Confidence 33445556666666666 79999999999999986
No 136
>PF03595 SLAC1: Voltage-dependent anion channel; InterPro: IPR004695 Two members of the Tellurite-Resistance/Dicarboxylate Transporter (TDT) family have been functionally characterised. One is the TehA protein of Escherichia coli which has been implicated in resistance to tellurite; the other is the Mae1 protein of Schizosaccharomyces pombe which functions in the uptake of malate and other dicarboxylates by a proton symport mechanism. These proteins exhibit 10 putative transmembrane a-helical spanners (TMSs).; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3M76_A 3M7C_A 3M7E_A 3M74_A 3M7B_A 3M71_A 3M72_A 3M77_A 3M7L_A 3M75_A ....
Probab=20.71 E-value=5.6e+02 Score=24.08 Aligned_cols=78 Identities=10% Similarity=0.022 Sum_probs=43.7
Q ss_pred eeehHhHHHHhHhhhhhccCCcccCCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHH-------HHH
Q 017167 148 KVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSG-------WLV 220 (376)
Q Consensus 148 ~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~-------~~v 220 (376)
.+-++.++..|+..... .-+.. .+.....|..+..++.+.+.. ..+
T Consensus 6 ~~f~~~mGtg~l~~~~~-~~~~~--------------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~ 58 (330)
T PF03595_consen 6 AWFGMVMGTGGLSNLLY-LLPYH--------------------------FGGLAILSEVLFILALILFLVLLVLYLLRWI 58 (330)
T ss_dssp GGGHHHHHHHHHHHHHH-TTTTT--------------------------STTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHHh--------------------------ccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888888852 11110 234456677777777777666 222
Q ss_pred HH-HHhhhhCCCcchhHHHHHHHHHHHHHHHHH
Q 017167 221 MQ-APVLKKYPARLSVTAYTCFFGLIQFMIIAA 252 (376)
Q Consensus 221 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (376)
.. |+..++..||....++-...-+...+....
T Consensus 59 ~~~~~~~~el~~p~~~~f~~t~~m~~~~l~~~~ 91 (330)
T PF03595_consen 59 RYPKAFKAELRHPVRSSFFPTFPMALMLLAAFI 91 (330)
T ss_dssp H-HHHHHHHHHSTTGGGGGGHHHHHHHHHHHHH
T ss_pred hhHHHHHHHhcCCcccchHHHHHHHHHHHHHHH
Confidence 22 223333446777666655555554444333
Done!