Query 017167
Match_columns 376
No_of_seqs 150 out of 1853
Neff 8.4
Searched_HMMs 13730
Date Mon Mar 25 10:01:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017167.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/017167hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2e74g1 f.23.26.1 (G:9-35) Pet 9.5 1.2E+02 0.009 15.0 2.8 18 202-219 2-19 (27)
2 d1bu2a2 a.74.1.1 (A:149-250) V 8.1 55 0.004 21.5 0.8 20 346-365 16-36 (102)
3 d1ansa_ g.11.1.1 (A:) Neurotox 7.5 54 0.0039 16.2 0.4 6 362-367 21-26 (27)
4 d1wpga4 f.33.1.1 (A:1-124,A:24 5.1 8.3E+02 0.06 20.6 10.2 64 47-110 264-337 (472)
5 d2r7da1 b.40.4.5 (A:404-461) R 4.7 1.1E+02 0.0077 18.2 0.7 11 364-374 12-22 (58)
6 d1iwga8 f.35.1.1 (A:513-566,A: 3.9 7.6E+02 0.055 18.4 7.4 27 309-335 96-122 (222)
7 d1pw4a_ f.38.1.1 (A:) Glycerol 3.8 8.7E+02 0.063 19.1 19.6 15 284-298 362-376 (447)
8 d2axtt1 f.23.34.1 (T:1-30) Pho 3.6 3.2E+02 0.023 13.6 2.2 11 313-323 18-28 (30)
9 d1c01a_ b.11.1.5 (A:) Plant an 2.9 1.9E+02 0.014 17.9 0.8 11 360-370 46-56 (76)
10 d1q90r_ f.23.12.1 (R:) ISP sub 2.2 6E+02 0.043 13.9 3.5 27 78-104 5-31 (39)
No 1
>d2e74g1 f.23.26.1 (G:9-35) PetG subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=9.47 E-value=1.2e+02 Score=14.97 Aligned_cols=18 Identities=22% Similarity=0.324 Sum_probs=13.8
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 017167 202 TLGCVYLIGHCLSWSGWL 219 (376)
Q Consensus 202 ~~G~~l~l~a~~~~a~~~ 219 (376)
.+|.+..-+++++|+.|.
T Consensus 2 vlgli~~tl~glf~aayq 19 (27)
T d2e74g1 2 VLGLVFATLGGLFYAAYQ 19 (27)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred eeeehHHHHHHHHHHHHH
Confidence 367788888888888764
No 2
>d1bu2a2 a.74.1.1 (A:149-250) Viral cyclin {Herpesvirus saimiri [TaxId: 10381]}
Probab=8.11 E-value=55 Score=21.52 Aligned_cols=20 Identities=25% Similarity=0.571 Sum_probs=15.3
Q ss_pred ccchhhHHHHHH-hHhhhccc
Q 017167 346 TCMLSFWIQMFV-CLTAICSG 365 (376)
Q Consensus 346 ~~~~~~~~~~~~-~~~~~~~~ 365 (376)
+.+..+|+|.|- -++.+||+
T Consensus 16 kipe~~wpql~e~~s~ticka 36 (102)
T d1bu2a2 16 KIPEDLWPQLYEAASTTICKA 36 (102)
T ss_dssp TCCTTSHHHHHHHHHHHHHHH
T ss_pred cCcHHHhHHHHHHHHHHHHHH
Confidence 445679999985 47788986
No 3
>d1ansa_ g.11.1.1 (A:) Neurotoxin III (ATX III) {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=7.46 E-value=54 Score=16.22 Aligned_cols=6 Identities=67% Similarity=1.381 Sum_probs=3.2
Q ss_pred hccccc
Q 017167 362 ICSGPQ 367 (376)
Q Consensus 362 ~~~~~~ 367 (376)
-||||.
T Consensus 21 gcsgpk 26 (27)
T d1ansa_ 21 GCSGPK 26 (27)
T ss_dssp CSSSSC
T ss_pred cccCCC
Confidence 356653
No 4
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=5.09 E-value=8.3e+02 Score=20.57 Aligned_cols=64 Identities=6% Similarity=0.045 Sum_probs=36.8
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHH------hhhhc----cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 017167 47 GISKLVFPVYRNIIAFLLLLPFAY------FLEKK----ERPAMTLNFALQFILLALVGITANQGFYLLGLENT 110 (376)
Q Consensus 47 ~~~~~~~~~~r~~~a~l~l~~~~~------~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~ 110 (376)
-++|.++.+..++.-.+....+.. ..+++ +.+..+++.+......|..........+++...+.
T Consensus 264 pl~~~qILwinli~d~lpaiaL~~ep~d~~iM~~~Pr~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~ 337 (472)
T d1wpga4 264 ALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYA 337 (472)
T ss_dssp SCCHHHHHHHHHTTTHHHHHHHTTCCCCSGGGGSCCCCTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred cccHHHHHHHHHHhHHHHHHHHhcCCCchhhhcCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 377889998888877655555443 11111 11234566667677666665455555566655543
No 5
>d2r7da1 b.40.4.5 (A:404-461) Ribonuclease II family protein DR0020 {Deinococcus radiodurans [TaxId: 1299]}
Probab=4.68 E-value=1.1e+02 Score=18.21 Aligned_cols=11 Identities=36% Similarity=0.706 Sum_probs=9.2
Q ss_pred cccceeeeccC
Q 017167 364 SGPQFTYILPK 374 (376)
Q Consensus 364 ~~~~~~~~~~~ 374 (376)
.|||-|..+|.
T Consensus 12 rg~qatllipe 22 (58)
T d2r7da1 12 RGAQATLLIPD 22 (58)
T ss_dssp ETTEEEEEEGG
T ss_pred cCCceEEEcch
Confidence 58999988886
No 6
>d1iwga8 f.35.1.1 (A:513-566,A:869-1036) Multidrug efflux transporter AcrB transmembrane domain {Escherichia coli [TaxId: 562]}
Probab=3.88 E-value=7.6e+02 Score=18.42 Aligned_cols=27 Identities=15% Similarity=-0.091 Sum_probs=18.2
Q ss_pred HHHHHHHHHhCCccccccccchhhhhh
Q 017167 309 VVAIMASFALGEEFYLGGYVPATSPAR 335 (376)
Q Consensus 309 ~a~l~~~l~l~e~~~~~~~iG~~lI~~ 335 (376)
.+.+.+..+.+.+++....+|..+.++
T Consensus 96 ~~~~~~l~~~g~~~~~~~~~g~i~l~G 122 (222)
T d1iwga8 96 IGALLAATFRGLTNDVYFQVGLLTTIG 122 (222)
T ss_dssp HHHHHHHHHTTCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCchhhhhcccccchhh
Confidence 344456667788888888777766543
No 7
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=3.83 E-value=8.7e+02 Score=19.05 Aligned_cols=15 Identities=0% Similarity=0.060 Sum_probs=7.3
Q ss_pred HHHHHHHHhcCCcee
Q 017167 284 FAVQIWCIDRGGPVF 298 (376)
Q Consensus 284 ~~l~~~al~~~~a~~ 298 (376)
...+....+..+...
T Consensus 362 ~~~~~~~~~~~p~~~ 376 (447)
T d1pw4a_ 362 MLIGLHALELAPKKA 376 (447)
T ss_dssp HHHHHHHHHTSCTTH
T ss_pred HHHHHHHHHHcCHHH
Confidence 344445555555433
No 8
>d2axtt1 f.23.34.1 (T:1-30) Photosystem II reaction center protein T, PsbT {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=3.64 E-value=3.2e+02 Score=13.62 Aligned_cols=11 Identities=9% Similarity=-0.070 Sum_probs=5.4
Q ss_pred HHHHHhCCccc
Q 017167 313 MASFALGEEFY 323 (376)
Q Consensus 313 ~~~l~l~e~~~ 323 (376)
+=.++++|+|.
T Consensus 18 ffaiffreppr 28 (30)
T d2axtt1 18 FFAIFFREPPR 28 (30)
T ss_dssp HHHHHTSCCCC
T ss_pred HHHHHhcCCCC
Confidence 33345566653
No 9
>d1c01a_ b.11.1.5 (A:) Plant antimicrobial protein MIAMP1 {Macadamia nut (Macadamia integrifolia) [TaxId: 60698]}
Probab=2.94 E-value=1.9e+02 Score=17.91 Aligned_cols=11 Identities=45% Similarity=0.510 Sum_probs=7.3
Q ss_pred hhhccccceee
Q 017167 360 TAICSGPQFTY 370 (376)
Q Consensus 360 ~~~~~~~~~~~ 370 (376)
|+.|+||.-|-
T Consensus 46 t~~c~gvahtr 56 (76)
T d1c01a_ 46 QAGCSGVAHTR 56 (76)
T ss_dssp SGGGCSCEEEE
T ss_pred ccccCCccccc
Confidence 56788876553
No 10
>d1q90r_ f.23.12.1 (R:) ISP subunit from the cytochrome b6f complex, transmembrane anchor {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=2.23 E-value=6e+02 Score=13.85 Aligned_cols=27 Identities=19% Similarity=0.162 Sum_probs=16.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017167 78 PAMTLNFALQFILLALVGITANQGFYL 104 (376)
Q Consensus 78 ~~~~~~~~~~~~~~g~~~~~~~~~~~~ 104 (376)
+...||++.-++..|.........++=
T Consensus 5 pDMgrR~~MNLll~G~~~~~~~g~l~p 31 (39)
T d1q90r_ 5 PDMNKRNIMNLILAGGAGLPITTLALG 31 (39)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHhccchhhhhhccc
Confidence 344567777777777666544444433
Done!