BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017172
(376 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4HVY0|CER1_ARATH Protein ECERIFERUM 1 OS=Arabidopsis thaliana GN=CER1 PE=1 SV=1
Length = 625
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/374 (57%), Positives = 289/374 (77%), Gaps = 18/374 (4%)
Query: 1 MPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFAS 60
MP+YDYIYGT+D S+D++YEK+L+R D VDVVHLTHLTTPESIYHLRIG AS
Sbjct: 263 MPLYDYIYGTMDESTDTLYEKTLERGD-------DIVDVVHLTHLTTPESIYHLRIGLAS 315
Query: 61 LASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYI 120
AS P Y +W+++LLWPFT S S++ + Y R FV+E N+ +KL LQ+WV+PRY
Sbjct: 316 FASYPFAY-----RWFMRLLWPFT-SLSMIFTLFYARLFVAERNSFNKLNLQSWVIPRYN 369
Query: 121 VQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIK 180
+QY L WR+EAIN++IE+AILEAD KGVKV+SLGL+NQGEELNRNGE+Y+ P+ +K++
Sbjct: 370 LQYLLKWRKEAINNMIEKAILEADKKGVKVLSLGLMNQGEELNRNGEVYIHNHPD-MKVR 428
Query: 181 VVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKL 240
+VDGS LAAAVV+NS+PK T V++ G +T KVA +AS+LCQ G++V+T+ D+YEK+
Sbjct: 429 LVDGSRLAAAVVINSVPKATTSVVMTGNLT--KVAYTIASALCQRGVQVSTLRLDEYEKI 486
Query: 241 KLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKD 300
+ +P E + +LV TS A K+WLVG+ T +EQ +A KGT+FIP++Q P ++LR+D
Sbjct: 487 RSCVPQECRDHLVYLTSEALSSNKVWLVGEGTTREEQEKATKGTLFIPFSQFPLKQLRRD 546
Query: 301 CFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQT--MCDIH 358
C YH+TPA+I+P SL N+HSCENWL R+ MSA R+AGI+HALEGW+++ECG + + D+
Sbjct: 547 CIYHTTPALIVPKSLVNVHSCENWLPRKAMSATRVAGILHALEGWEMHECGTSLLLSDLD 606
Query: 359 QVWHASLRHGFRPL 372
QVW A L HGF+PL
Sbjct: 607 QVWEACLSHGFQPL 620
>sp|F4HVX7|CERL1_ARATH Protein CER1-like 1 OS=Arabidopsis thaliana GN=At1g02190 PE=2 SV=1
Length = 627
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/379 (52%), Positives = 267/379 (70%), Gaps = 22/379 (5%)
Query: 1 MPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFAS 60
MPIYD+IYGT D +DS+YE+SL E EEES D V+HLTHLTT SIY +R+GF S
Sbjct: 263 MPIYDFIYGTTDNLTDSLYERSL----EIEEESPD---VIHLTHLTTHNSIYQMRLGFPS 315
Query: 61 LASKPHRYTYTLSQWYLQ-LLWPFTASCSV-LVSWIYGRTFVSESNTLDKLKLQTWVVPR 118
L+S P ++ WYL +WPFT CS L S I RTFV E N L L + + ++P+
Sbjct: 316 LSSCP---LWSRPPWYLTCFMWPFTLLCSFALTSAIPLRTFVFERNRLRDLTVHSHLLPK 372
Query: 119 YIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLK 178
+ Y E+IN++IEEAILEAD KGVKV+SLGL+N EELN +GE+Y+++ P KLK
Sbjct: 373 FSFHYKSQRHHESINTIIEEAILEADEKGVKVMSLGLMNNREELNGSGEMYVQKYP-KLK 431
Query: 179 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE 238
I++VDGSS+AA VV+N++PK ++ RG +T KVA+AV +LCQ G+KV + ++++
Sbjct: 432 IRLVDGSSMAATVVINNIPKEATEIVFRGNLT--KVASAVVFALCQKGVKVVVLREEEHS 489
Query: 239 KLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLR 298
KL I NLVLSTS + + K+WLVGD + +EQ +A +GT+F+P++ PP KLR
Sbjct: 490 KL---IKSGVDKNLVLSTSNSYYSPKVWLVGDGIENEEQMKAKEGTLFVPFSHFPPNKLR 546
Query: 299 KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDI- 357
KDCFY STPAM +P S N+ SCENWLGRRVMSAW+I GI+HALEGW+ ++CG T C++
Sbjct: 547 KDCFYQSTPAMRVPKSAQNIDSCENWLGRRVMSAWKIGGIVHALEGWEEHDCGNT-CNVL 605
Query: 358 --HQVWHASLRHGFRPLFP 374
H +W A+LRH F+PL P
Sbjct: 606 RLHAIWEAALRHDFQPLPP 624
>sp|F4IR05|CERL2_ARATH Protein CER1-like 2 OS=Arabidopsis thaliana GN=At2g37700 PE=2 SV=1
Length = 613
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/375 (52%), Positives = 252/375 (67%), Gaps = 30/375 (8%)
Query: 1 MPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFAS 60
MP+YDYIYGT D SDS+YE SL E+EEE D +HLTHLT+ +SIYHLR+GFAS
Sbjct: 259 MPMYDYIYGTTDECSDSLYETSL----EKEEEKPD---AIHLTHLTSLDSIYHLRLGFAS 311
Query: 61 LASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYI 120
L+S P S+ YL L+ PF S ++ +TFV E N L L + ++P++
Sbjct: 312 LSSHPLS-----SRCYLFLMKPFALILSFILRSFSFQTFVVERNRFRDLTLHSHLLPKFS 366
Query: 121 VQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIK 180
Y ++E IN +IE AILEAD KGVKV+SLGLLNQGEELN GE+Y+ R P KLKI+
Sbjct: 367 SHYMSHQQKECINKMIEAAILEADKKGVKVMSLGLLNQGEELNGYGEMYVRRHP-KLKIR 425
Query: 181 VVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKL 240
+VDG SLAA VV++S+P T VL RG +T KVA A+ SLCQ IKV + K+++ L
Sbjct: 426 IVDGGSLAAEVVLHSIPVGTKEVLFRGQIT--KVARAIVFSLCQNAIKVMVLRKEEHSML 483
Query: 241 KLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKD 300
+ + + NL IWLVGD L+ KEQ A GT+F+P++Q PP+ LRKD
Sbjct: 484 AEFLDDKCKENL------------IWLVGDGLSTKEQKMAKDGTLFLPFSQFPPKTLRKD 531
Query: 301 CFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECG---QTMCDI 357
CFYH+TPAMIIP S N+ SCENWLGRRVMSAWR+ GI+HALEGW +ECG ++ +
Sbjct: 532 CFYHTTPAMIIPHSAQNIDSCENWLGRRVMSAWRVGGIVHALEGWKEHECGLDDNSIINP 591
Query: 358 HQVWHASLRHGFRPL 372
+VW A+LR+GF+PL
Sbjct: 592 PRVWEAALRNGFQPL 606
>sp|Q8H1Z0|CER3_ARATH Protein ECERIFERUM 3 OS=Arabidopsis thaliana GN=CER3 PE=1 SV=1
Length = 632
Score = 221 bits (562), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 204/372 (54%), Gaps = 17/372 (4%)
Query: 1 MPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFAS 60
MP++D + T + +S + +K +GE + + V L H S H F S
Sbjct: 265 MPLFDVLGDTQNPNSWELQKKIRLSAGERKRVP----EFVFLAHGVDVMSAMHAPFVFRS 320
Query: 61 LASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYI 120
AS P+ ++ +L +WPFT C +L W + +TF+ TL QTW VPR+
Sbjct: 321 FASMPYT-----TRIFLLPMWPFTF-CVMLGMWAWSKTFLFSFYTLRNNLCQTWGVPRFG 374
Query: 121 VQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIK 180
QY LP+ + IN IE AIL AD GVKVISL LN+ E LN G +++ + P+ L+++
Sbjct: 375 FQYFLPFATKGINDQIEAAILRADKIGVKVISLAALNKNEALNGGGTLFVNKHPD-LRVR 433
Query: 181 VVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKV--ATICKDDYE 238
VV G++L AAV++ +PK V L G + K+ A+A LC+ G++V T+ + ++
Sbjct: 434 VVHGNTLTAAVILYEIPKDVNEVFLTGATS--KLGRAIALYLCRRGVRVLMLTLSMERFQ 491
Query: 239 KLKLRIPVEAQHNLVLSTSY-AAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKL 297
K++ PVE Q+NLV T Y AA K W+VG LT +EQ+ AP GT F + P K
Sbjct: 492 KIQKEAPVEFQNNLVQVTKYNAAQHCKTWIVGKWLTPREQSWAPAGTHFHQFVVPPILKF 551
Query: 298 RKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCD- 356
R++C Y AM +P + + +CE + R V+ A G++H LEGW +E G D
Sbjct: 552 RRNCTYGDLAAMKLPKDVEGLGTCEYTMERGVVHACHAGGVVHMLEGWKHHEVGAIDVDR 611
Query: 357 IHQVWHASLRHG 368
I VW A++++G
Sbjct: 612 IDLVWEAAMKYG 623
>sp|P59596|VME1_CVHSA Membrane protein OS=Human SARS coronavirus GN=M PE=1 SV=1
Length = 221
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 14/59 (23%)
Query: 52 YHLRIGFASLA---------SKPHRYTYTLSQWYLQLLWPFTASCSVL-----VSWIYG 96
++L IGF LA S +R+ Y + +L LLWP T +C VL ++W+ G
Sbjct: 19 WNLVIGFLFLAWIMLLQFAYSNRNRFLYIIKLVFLWLLWPVTLACFVLAAVYRINWVTG 77
>sp|Q3LZX9|VME1_BCHK3 Membrane protein OS=Bat coronavirus HKU3 GN=M PE=3 SV=1
Length = 221
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 14/59 (23%)
Query: 52 YHLRIGFASLA---------SKPHRYTYTLSQWYLQLLWPFTASCSVL-----VSWIYG 96
++L IGF LA S +R+ Y + +L LLWP T +C VL ++W+ G
Sbjct: 19 WNLVIGFIFLAWIMLLQFAYSNRNRFLYIIKLVFLWLLWPVTLACFVLAAVYRINWVTG 77
>sp|Q0Q472|VME1_BC279 Membrane protein OS=Bat coronavirus 279/2005 GN=M PE=3 SV=1
Length = 221
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 14/59 (23%)
Query: 52 YHLRIGFASLA---------SKPHRYTYTLSQWYLQLLWPFTASCSVL-----VSWIYG 96
++L IGF LA S +R+ Y + +L LLWP T +C VL ++W+ G
Sbjct: 19 WNLVIGFIFLAWIMLLQFAYSNRNRFLYIIKLVFLWLLWPVTLACFVLAAVYRINWVTG 77
>sp|Q3I5J2|VME1_BCRP3 Membrane protein OS=Bat coronavirus Rp3/2004 GN=M PE=3 SV=1
Length = 221
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 14/59 (23%)
Query: 52 YHLRIGFASLA---------SKPHRYTYTLSQWYLQLLWPFTASCSVL-----VSWIYG 96
++L IGF LA S +R+ Y + +L LLWP T +C VL ++W+ G
Sbjct: 19 WNLVIGFIFLAWIMLLQFAYSNRNRFLYIIKLVFLWLLWPVTLACFVLAAVYRINWVTG 77
>sp|A8ZV82|RPOA_DESOH DNA-directed RNA polymerase subunit alpha OS=Desulfococcus
oleovorans (strain DSM 6200 / Hxd3) GN=rpoA PE=3 SV=1
Length = 339
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 16/147 (10%)
Query: 91 VSWIYGRTFVSESNTLDKLKLQTW----VVPRYIVQYNLPWRREAINSLIE-EAILEADA 145
V+++ G + V + DKL L+ W V+P V + +E +N I + E +
Sbjct: 185 VNYVVGNSRVKQKTDFDKLTLEVWTDGSVLPEDAVAFAAKIMKEQMNVFINFDESAEPEH 244
Query: 146 KGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVV--VNSLPKTTAHV 203
G K S G + N N L R N+L++ V + L A + + L + T
Sbjct: 245 AGRKDDSGGKV-----FNEN----LYRSVNELELSVRSSNCLKNAEIDKLYQLVQKTESE 295
Query: 204 LLRGTVTANKVANAVASSLCQMGIKVA 230
+L+ K N + L +MG+ +
Sbjct: 296 MLKTKNFGRKSLNEIKELLAEMGLSLG 322
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 142,835,411
Number of Sequences: 539616
Number of extensions: 5794760
Number of successful extensions: 16574
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 16544
Number of HSP's gapped (non-prelim): 17
length of query: 376
length of database: 191,569,459
effective HSP length: 119
effective length of query: 257
effective length of database: 127,355,155
effective search space: 32730274835
effective search space used: 32730274835
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)