Query 017172
Match_columns 376
No_of_seqs 85 out of 87
Neff 3.5
Searched_HMMs 46136
Date Fri Mar 29 06:14:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017172.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017172hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02869 fatty aldehyde decarb 100.0 8E-164 2E-168 1256.4 27.5 355 1-375 263-619 (620)
2 PF12076 Wax2_C: WAX2 C-termin 100.0 7.8E-89 1.7E-93 607.9 11.9 163 203-371 1-164 (164)
3 PRK14982 acyl-ACP reductase; P 99.5 1E-13 2.2E-18 136.9 15.0 298 39-373 2-338 (340)
4 COG5322 Predicted dehydrogenas 98.0 8.1E-05 1.8E-09 73.8 13.2 228 127-372 87-350 (351)
5 cd01078 NAD_bind_H4MPT_DH NADP 95.7 0.0094 2E-07 53.2 3.4 50 183-234 2-60 (194)
6 PF13460 NAD_binding_10: NADH( 95.6 0.021 4.5E-07 49.0 5.0 66 203-290 1-67 (183)
7 CHL00194 ycf39 Ycf39; Provisio 94.5 0.1 2.3E-06 49.6 6.8 63 202-283 2-64 (317)
8 PLN03209 translocon at the inn 92.2 0.3 6.4E-06 52.6 6.3 60 171-232 40-110 (576)
9 PRK06482 short chain dehydroge 92.2 0.29 6.2E-06 44.9 5.4 31 200-232 2-32 (276)
10 TIGR01832 kduD 2-deoxy-D-gluco 91.7 0.31 6.8E-06 43.6 5.0 34 200-235 5-38 (248)
11 COG4221 Short-chain alcohol de 91.6 0.28 6.1E-06 47.9 4.9 44 201-246 7-52 (246)
12 PRK06924 short chain dehydroge 91.4 0.26 5.6E-06 44.2 4.2 31 201-233 2-32 (251)
13 PRK06841 short chain dehydroge 90.9 0.32 7E-06 43.7 4.3 34 200-235 15-48 (255)
14 PRK07577 short chain dehydroge 90.9 0.32 6.9E-06 43.1 4.2 32 201-234 4-35 (234)
15 PRK08264 short chain dehydroge 90.8 0.3 6.5E-06 43.4 4.0 32 201-234 7-39 (238)
16 PRK05867 short chain dehydroge 90.6 0.53 1.2E-05 42.6 5.4 33 199-233 8-40 (253)
17 PRK08265 short chain dehydroge 90.6 0.47 1E-05 43.5 5.2 32 201-234 7-38 (261)
18 PRK06196 oxidoreductase; Provi 90.5 0.63 1.4E-05 44.2 6.1 43 189-233 15-57 (315)
19 PRK12825 fabG 3-ketoacyl-(acyl 90.5 0.44 9.6E-06 41.8 4.7 29 201-231 7-35 (249)
20 PRK09186 flagellin modificatio 90.2 0.54 1.2E-05 42.2 5.1 31 201-233 5-35 (256)
21 TIGR03649 ergot_EASG ergot alk 90.1 0.31 6.8E-06 45.1 3.7 29 203-233 2-30 (285)
22 PRK12826 3-ketoacyl-(acyl-carr 90.0 0.41 8.9E-06 42.4 4.1 32 201-234 7-38 (251)
23 PRK05557 fabG 3-ketoacyl-(acyl 90.0 0.64 1.4E-05 40.9 5.3 29 201-231 6-34 (248)
24 PRK06179 short chain dehydroge 90.0 0.43 9.3E-06 43.5 4.4 32 201-234 5-36 (270)
25 TIGR01963 PHB_DH 3-hydroxybuty 89.8 0.58 1.3E-05 41.7 5.0 31 201-233 2-32 (255)
26 PRK08177 short chain dehydroge 89.8 0.44 9.5E-06 42.5 4.2 31 201-233 2-32 (225)
27 PRK12429 3-hydroxybutyrate deh 89.8 0.61 1.3E-05 41.6 5.1 30 201-232 5-34 (258)
28 PRK06949 short chain dehydroge 89.8 0.77 1.7E-05 41.2 5.8 43 198-242 7-51 (258)
29 PRK07890 short chain dehydroge 89.6 0.62 1.3E-05 41.8 5.0 31 201-233 6-36 (258)
30 PRK09135 pteridine reductase; 89.6 0.74 1.6E-05 40.7 5.4 32 200-233 6-37 (249)
31 PRK05993 short chain dehydroge 89.5 0.67 1.4E-05 43.0 5.3 31 201-233 5-35 (277)
32 PRK06182 short chain dehydroge 89.5 0.5 1.1E-05 43.4 4.4 31 201-233 4-34 (273)
33 PRK07063 short chain dehydroge 89.3 0.69 1.5E-05 41.9 5.1 41 201-243 8-50 (260)
34 PRK12829 short chain dehydroge 89.3 0.87 1.9E-05 40.9 5.7 32 201-234 12-43 (264)
35 PRK05653 fabG 3-ketoacyl-(acyl 89.3 0.55 1.2E-05 41.3 4.3 32 201-234 6-37 (246)
36 PRK06197 short chain dehydroge 89.2 0.57 1.2E-05 44.1 4.7 37 195-233 10-47 (306)
37 PRK08063 enoyl-(acyl carrier p 89.1 0.52 1.1E-05 42.1 4.1 29 201-231 5-33 (250)
38 PRK07326 short chain dehydroge 89.1 0.69 1.5E-05 41.0 4.9 32 201-234 7-38 (237)
39 PRK09291 short chain dehydroge 89.0 0.58 1.3E-05 42.0 4.4 31 201-233 3-33 (257)
40 PRK07523 gluconate 5-dehydroge 89.0 0.89 1.9E-05 41.1 5.6 33 200-234 10-42 (255)
41 PRK12742 oxidoreductase; Provi 89.0 0.83 1.8E-05 40.5 5.3 31 200-232 6-36 (237)
42 PRK07478 short chain dehydroge 88.9 0.76 1.6E-05 41.5 5.1 31 201-233 7-37 (254)
43 PRK07856 short chain dehydroge 88.6 0.61 1.3E-05 42.2 4.3 33 200-234 6-38 (252)
44 PRK07454 short chain dehydroge 88.6 1 2.3E-05 40.2 5.7 32 200-233 6-37 (241)
45 PRK06077 fabG 3-ketoacyl-(acyl 88.6 0.74 1.6E-05 41.1 4.7 29 201-231 7-35 (252)
46 PRK06947 glucose-1-dehydrogena 88.6 0.72 1.6E-05 41.3 4.7 29 201-231 3-31 (248)
47 PRK06523 short chain dehydroge 88.5 0.58 1.3E-05 42.3 4.1 33 200-234 9-41 (260)
48 COG0300 DltE Short-chain dehyd 88.5 0.84 1.8E-05 44.8 5.4 48 199-248 5-54 (265)
49 PRK06398 aldose dehydrogenase; 88.4 0.59 1.3E-05 42.9 4.1 31 201-233 7-37 (258)
50 PRK05854 short chain dehydroge 88.4 0.77 1.7E-05 43.9 5.1 30 201-232 15-44 (313)
51 PRK12481 2-deoxy-D-gluconate 3 88.4 0.79 1.7E-05 41.9 4.9 31 201-233 9-39 (251)
52 PRK07102 short chain dehydroge 88.3 0.67 1.5E-05 41.6 4.3 32 201-234 2-33 (243)
53 TIGR03325 BphB_TodD cis-2,3-di 88.3 0.89 1.9E-05 41.5 5.2 32 200-233 5-36 (262)
54 PRK07825 short chain dehydroge 88.2 0.9 1.9E-05 41.6 5.2 31 201-233 6-36 (273)
55 PRK08340 glucose-1-dehydrogena 88.2 0.88 1.9E-05 41.4 5.1 30 202-233 2-31 (259)
56 PRK08589 short chain dehydroge 88.1 0.8 1.7E-05 42.3 4.8 32 201-234 7-38 (272)
57 PRK06180 short chain dehydroge 88.0 0.94 2E-05 41.9 5.2 32 200-233 4-35 (277)
58 PRK06124 gluconate 5-dehydroge 88.0 1.2 2.5E-05 40.3 5.6 38 195-234 6-43 (256)
59 TIGR01746 Thioester-redct thio 87.9 0.86 1.9E-05 42.4 4.9 28 203-232 2-31 (367)
60 PRK05884 short chain dehydroge 87.9 0.92 2E-05 41.0 4.9 30 202-233 2-31 (223)
61 PRK06483 dihydromonapterin red 87.8 0.9 2E-05 40.6 4.8 32 201-234 3-34 (236)
62 PRK12824 acetoacetyl-CoA reduc 87.8 0.95 2.1E-05 40.1 4.9 32 201-234 3-34 (245)
63 PRK07062 short chain dehydroge 87.7 0.94 2E-05 41.2 4.9 32 200-233 8-39 (265)
64 KOG1208 Dehydrogenases with di 87.7 0.94 2E-05 45.0 5.3 55 187-243 22-78 (314)
65 PRK07231 fabG 3-ketoacyl-(acyl 87.7 1 2.2E-05 40.0 5.1 32 201-234 6-37 (251)
66 PRK08085 gluconate 5-dehydroge 87.6 0.8 1.7E-05 41.4 4.4 33 199-233 8-40 (254)
67 PRK12823 benD 1,6-dihydroxycyc 87.4 0.81 1.7E-05 41.4 4.3 32 201-234 9-40 (260)
68 PRK12939 short chain dehydroge 87.4 1.1 2.5E-05 39.7 5.1 32 200-233 7-38 (250)
69 PRK07023 short chain dehydroge 87.4 0.77 1.7E-05 41.2 4.1 31 201-233 2-32 (243)
70 PLN00198 anthocyanidin reducta 87.3 0.81 1.8E-05 43.6 4.5 33 197-231 6-38 (338)
71 PLN02780 ketoreductase/ oxidor 87.2 0.97 2.1E-05 43.8 5.0 41 201-243 54-96 (320)
72 PLN00141 Tic62-NAD(P)-related 87.1 0.9 1.9E-05 41.6 4.4 31 200-232 17-47 (251)
73 PRK07774 short chain dehydroge 87.0 0.91 2E-05 40.6 4.4 32 201-234 7-38 (250)
74 PRK06500 short chain dehydroge 87.0 1.2 2.7E-05 39.6 5.1 31 201-233 7-37 (249)
75 PRK05717 oxidoreductase; Valid 87.0 1.4 3.1E-05 39.9 5.7 36 196-233 6-41 (255)
76 PRK08017 oxidoreductase; Provi 87.0 1.2 2.7E-05 39.9 5.2 31 201-233 3-33 (256)
77 PF00106 adh_short: short chai 87.0 1.2 2.5E-05 37.4 4.7 31 201-233 1-32 (167)
78 KOG1014 17 beta-hydroxysteroid 86.9 0.72 1.6E-05 46.5 4.0 43 201-245 50-94 (312)
79 PRK08993 2-deoxy-D-gluconate 3 86.8 1.3 2.7E-05 40.4 5.2 39 193-233 3-41 (253)
80 PRK07024 short chain dehydroge 86.8 1.4 3E-05 40.2 5.5 31 201-233 3-33 (257)
81 PRK12828 short chain dehydroge 86.7 0.91 2E-05 39.8 4.1 32 201-234 8-39 (239)
82 PRK08643 acetoin reductase; Va 86.6 1.3 2.8E-05 40.0 5.1 31 201-233 3-33 (256)
83 PRK06101 short chain dehydroge 86.6 1.3 2.9E-05 40.0 5.2 31 201-233 2-32 (240)
84 PRK08220 2,3-dihydroxybenzoate 86.3 1 2.3E-05 40.2 4.4 34 201-236 9-42 (252)
85 PRK05786 fabG 3-ketoacyl-(acyl 86.3 1.4 3E-05 39.1 5.1 31 201-233 6-36 (238)
86 PRK08213 gluconate 5-dehydroge 86.3 1.4 3E-05 40.0 5.2 31 201-233 13-43 (259)
87 PRK05565 fabG 3-ketoacyl-(acyl 86.3 1.1 2.3E-05 39.7 4.4 30 201-232 6-35 (247)
88 PLN02253 xanthoxin dehydrogena 86.3 1.6 3.4E-05 40.2 5.6 31 201-233 19-49 (280)
89 PRK08945 putative oxoacyl-(acy 86.2 0.98 2.1E-05 40.6 4.1 34 199-234 11-44 (247)
90 PRK05872 short chain dehydroge 86.1 1.4 3E-05 41.6 5.2 43 200-244 9-53 (296)
91 PRK06194 hypothetical protein; 86.0 1.4 3E-05 40.6 5.1 31 201-233 7-37 (287)
92 PLN02662 cinnamyl-alcohol dehy 85.8 0.9 2E-05 42.4 3.8 30 201-232 5-34 (322)
93 PRK05866 short chain dehydroge 85.5 1.5 3.2E-05 41.6 5.2 31 201-233 41-71 (293)
94 PRK08267 short chain dehydroge 85.5 1.6 3.4E-05 39.6 5.2 31 201-233 2-32 (260)
95 COG1484 DnaC DNA replication p 85.4 1.5 3.3E-05 42.0 5.2 84 161-245 63-153 (254)
96 PRK08339 short chain dehydroge 85.4 1.4 3.1E-05 40.7 4.9 31 201-233 9-39 (263)
97 PRK06935 2-deoxy-D-gluconate 3 85.4 1.6 3.4E-05 39.7 5.1 33 199-233 14-46 (258)
98 COG0451 WcaG Nucleoside-diphos 85.3 1 2.2E-05 41.3 3.9 29 203-233 3-31 (314)
99 PRK12745 3-ketoacyl-(acyl-carr 85.2 1.5 3.2E-05 39.4 4.7 31 201-233 3-33 (256)
100 PRK08263 short chain dehydroge 85.1 1.3 2.7E-05 40.9 4.4 31 201-233 4-34 (275)
101 PRK08251 short chain dehydroge 85.1 1.8 3.8E-05 38.8 5.2 30 201-232 3-32 (248)
102 PRK06914 short chain dehydroge 84.9 1.7 3.8E-05 39.8 5.2 31 201-233 4-34 (280)
103 PRK06057 short chain dehydroge 84.9 1.8 3.8E-05 39.3 5.1 30 201-232 8-37 (255)
104 PRK06953 short chain dehydroge 84.9 1.7 3.6E-05 38.7 4.9 31 201-233 2-32 (222)
105 PRK08936 glucose-1-dehydrogena 84.8 1.6 3.5E-05 39.7 4.8 31 200-232 7-37 (261)
106 PRK08628 short chain dehydroge 84.8 1.2 2.6E-05 40.2 4.0 32 200-233 7-38 (258)
107 PRK12936 3-ketoacyl-(acyl-carr 84.8 1.6 3.4E-05 38.7 4.7 30 201-232 7-36 (245)
108 PLN02986 cinnamyl-alcohol dehy 84.7 1.2 2.7E-05 41.9 4.3 29 201-231 6-34 (322)
109 PRK10538 malonic semialdehyde 84.7 1.8 4E-05 39.1 5.2 30 202-233 2-31 (248)
110 PRK12384 sorbitol-6-phosphate 84.7 1.8 4E-05 39.1 5.1 31 201-233 3-33 (259)
111 PRK07069 short chain dehydroge 84.7 1.4 3E-05 39.4 4.3 29 203-233 2-30 (251)
112 PRK07074 short chain dehydroge 84.6 1.3 2.9E-05 39.9 4.2 31 201-233 3-33 (257)
113 PLN02695 GDP-D-mannose-3',5'-e 84.6 1.4 3.1E-05 43.4 4.8 33 199-233 20-52 (370)
114 PLN02583 cinnamoyl-CoA reducta 84.3 1.6 3.5E-05 41.3 4.8 31 200-232 6-36 (297)
115 PRK08226 short chain dehydroge 84.3 1.5 3.2E-05 39.8 4.4 33 201-235 7-39 (263)
116 PF05368 NmrA: NmrA-like famil 84.3 1.5 3.4E-05 39.4 4.5 28 203-232 1-28 (233)
117 PRK05876 short chain dehydroge 84.2 1.8 4E-05 40.5 5.1 31 201-233 7-37 (275)
118 PRK06200 2,3-dihydroxy-2,3-dih 84.1 1.9 4.2E-05 39.2 5.1 41 201-243 7-49 (263)
119 PRK06181 short chain dehydroge 84.1 1.5 3.3E-05 39.7 4.4 32 201-234 2-33 (263)
120 PRK12938 acetyacetyl-CoA reduc 84.0 1.5 3.2E-05 39.3 4.2 29 201-231 4-32 (246)
121 PRK12937 short chain dehydroge 83.9 1.9 4.1E-05 38.3 4.8 30 201-232 6-35 (245)
122 PRK06171 sorbitol-6-phosphate 83.8 1.4 3.1E-05 40.0 4.1 31 201-233 10-40 (266)
123 PRK06114 short chain dehydroge 83.8 1.7 3.7E-05 39.4 4.6 31 201-233 9-39 (254)
124 PRK07985 oxidoreductase; Provi 83.7 1.3 2.9E-05 41.8 4.0 30 201-232 50-79 (294)
125 PRK07889 enoyl-(acyl carrier p 83.7 1.9 4.1E-05 39.7 4.9 43 201-244 8-55 (256)
126 PRK08703 short chain dehydroge 83.6 2.1 4.6E-05 38.3 5.0 31 201-233 7-37 (239)
127 PLN02650 dihydroflavonol-4-red 83.6 1.3 2.9E-05 42.4 4.0 31 200-232 5-35 (351)
128 PRK07677 short chain dehydroge 83.6 2.1 4.6E-05 38.7 5.1 31 201-233 2-32 (252)
129 TIGR03206 benzo_BadH 2-hydroxy 83.6 2.2 4.9E-05 38.0 5.2 31 201-233 4-34 (250)
130 PRK07666 fabG 3-ketoacyl-(acyl 83.5 1.7 3.7E-05 38.8 4.3 31 201-233 8-38 (239)
131 PRK12746 short chain dehydroge 83.4 1.6 3.4E-05 39.3 4.1 29 201-231 7-35 (254)
132 PRK09072 short chain dehydroge 83.4 2.2 4.8E-05 38.8 5.2 31 201-233 6-36 (263)
133 PRK07067 sorbitol dehydrogenas 83.3 2.2 4.8E-05 38.6 5.1 31 201-233 7-37 (257)
134 PRK07060 short chain dehydroge 83.3 2.8 6.1E-05 37.2 5.6 34 199-234 8-41 (245)
135 TIGR01830 3oxo_ACP_reduc 3-oxo 83.2 1.6 3.5E-05 38.4 4.0 30 203-234 1-30 (239)
136 PRK05875 short chain dehydroge 83.2 2.2 4.8E-05 39.0 5.1 32 201-234 8-39 (276)
137 PRK08416 7-alpha-hydroxysteroi 83.1 2 4.3E-05 39.3 4.7 30 201-232 9-38 (260)
138 PRK06505 enoyl-(acyl carrier p 83.0 1.6 3.4E-05 40.9 4.1 33 201-233 8-40 (271)
139 PRK06550 fabG 3-ketoacyl-(acyl 82.9 1.7 3.6E-05 38.6 4.1 33 201-235 6-38 (235)
140 PRK06463 fabG 3-ketoacyl-(acyl 82.8 2.2 4.8E-05 38.7 4.9 30 201-232 8-37 (255)
141 PRK06079 enoyl-(acyl carrier p 82.8 2 4.3E-05 39.4 4.6 33 201-233 8-40 (252)
142 PRK08862 short chain dehydroge 82.7 2.3 4.9E-05 39.0 4.9 31 201-233 6-36 (227)
143 PRK07806 short chain dehydroge 82.7 2.1 4.6E-05 38.3 4.7 31 201-233 7-37 (248)
144 COG0702 Predicted nucleoside-d 82.5 1.6 3.4E-05 39.3 3.7 29 202-232 2-30 (275)
145 PRK08642 fabG 3-ketoacyl-(acyl 82.4 2.2 4.8E-05 38.1 4.7 29 201-231 6-34 (253)
146 TIGR03466 HpnA hopanoid-associ 82.4 1.5 3.4E-05 40.5 3.8 30 202-233 2-31 (328)
147 PRK05650 short chain dehydroge 82.4 2.4 5.3E-05 38.8 5.1 29 202-232 2-30 (270)
148 TIGR01831 fabG_rel 3-oxoacyl-( 82.2 1.8 3.9E-05 38.5 4.0 29 203-233 1-29 (239)
149 PRK07097 gluconate 5-dehydroge 82.2 3 6.5E-05 38.1 5.5 37 194-232 4-40 (265)
150 PLN02166 dTDP-glucose 4,6-dehy 82.2 1.9 4.2E-05 44.1 4.7 38 194-233 110-151 (436)
151 PRK06125 short chain dehydroge 82.0 2.6 5.7E-05 38.3 5.1 31 201-233 8-38 (259)
152 PRK07035 short chain dehydroge 81.9 2.8 6.1E-05 37.7 5.2 31 201-233 9-39 (252)
153 PRK07453 protochlorophyllide o 81.4 2.7 5.9E-05 39.9 5.2 31 201-233 7-37 (322)
154 PLN02657 3,8-divinyl protochlo 81.4 2.3 5E-05 42.6 4.9 39 194-234 54-92 (390)
155 PRK05693 short chain dehydroge 81.4 3 6.5E-05 38.3 5.2 31 201-233 2-32 (274)
156 PRK07576 short chain dehydroge 81.3 2.2 4.8E-05 39.3 4.4 32 200-233 9-40 (264)
157 PRK12827 short chain dehydroge 81.2 2.1 4.6E-05 37.9 4.1 29 201-231 7-35 (249)
158 PRK09496 trkA potassium transp 81.2 3.5 7.7E-05 41.0 6.1 83 145-243 179-273 (453)
159 PLN02896 cinnamyl-alcohol dehy 81.2 2.3 4.9E-05 41.0 4.6 31 200-232 10-40 (353)
160 TIGR01777 yfcH conserved hypot 81.1 1.5 3.2E-05 40.0 3.1 29 203-233 1-29 (292)
161 PRK06128 oxidoreductase; Provi 81.1 1.9 4.2E-05 40.6 4.0 30 201-232 56-85 (300)
162 PRK08277 D-mannonate oxidoredu 81.0 3 6.5E-05 38.3 5.1 32 201-234 11-42 (278)
163 PRK06139 short chain dehydroge 81.0 2.6 5.6E-05 41.3 5.0 31 201-233 8-38 (330)
164 PRK06138 short chain dehydroge 80.9 3.1 6.6E-05 37.2 5.0 31 201-233 6-36 (252)
165 PRK07109 short chain dehydroge 80.8 2.8 6.1E-05 40.8 5.1 32 200-233 8-39 (334)
166 PRK08618 ornithine cyclodeamin 80.7 13 0.00029 36.5 9.8 96 145-243 63-171 (325)
167 PRK07832 short chain dehydroge 80.7 2.4 5.2E-05 39.0 4.4 30 202-233 2-31 (272)
168 PRK06113 7-alpha-hydroxysteroi 80.6 2.4 5.3E-05 38.4 4.3 32 200-233 11-42 (255)
169 PRK09134 short chain dehydroge 80.5 2.9 6.2E-05 38.0 4.8 30 200-231 9-38 (258)
170 PLN02214 cinnamoyl-CoA reducta 80.5 2.1 4.6E-05 41.5 4.2 31 200-232 10-40 (342)
171 PRK10675 UDP-galactose-4-epime 80.4 2.1 4.6E-05 40.3 4.0 29 202-232 2-30 (338)
172 PF01370 Epimerase: NAD depend 80.1 2.3 5E-05 37.4 3.9 27 203-231 1-27 (236)
173 PRK12743 oxidoreductase; Provi 80.1 2.9 6.3E-05 38.0 4.7 30 201-232 3-32 (256)
174 PRK12747 short chain dehydroge 80.0 3 6.6E-05 37.6 4.8 30 201-232 5-34 (252)
175 PRK13394 3-hydroxybutyrate deh 79.9 3.5 7.5E-05 37.0 5.1 32 201-234 8-39 (262)
176 PLN02240 UDP-glucose 4-epimera 79.7 2.6 5.5E-05 40.0 4.3 31 201-233 6-36 (352)
177 PRK08690 enoyl-(acyl carrier p 79.6 2.4 5.3E-05 39.1 4.1 32 201-232 7-38 (261)
178 PRK12548 shikimate 5-dehydroge 79.5 2.2 4.7E-05 41.3 3.9 32 200-234 126-158 (289)
179 PRK07424 bifunctional sterol d 79.5 2.4 5.3E-05 43.5 4.4 32 200-233 178-209 (406)
180 TIGR02415 23BDH acetoin reduct 79.4 3.8 8.2E-05 36.7 5.1 31 201-233 1-31 (254)
181 TIGR01179 galE UDP-glucose-4-e 79.4 2.3 4.9E-05 39.1 3.8 29 202-232 1-29 (328)
182 PRK07984 enoyl-(acyl carrier p 79.3 2.8 6E-05 39.3 4.4 33 201-233 7-39 (262)
183 PRK12935 acetoacetyl-CoA reduc 79.3 3.5 7.7E-05 36.8 4.9 29 201-231 7-35 (247)
184 PLN02686 cinnamoyl-CoA reducta 79.3 2.3 4.9E-05 42.0 4.0 31 199-231 52-82 (367)
185 PRK08303 short chain dehydroge 79.3 2.5 5.4E-05 40.7 4.2 31 201-233 9-39 (305)
186 PRK06701 short chain dehydroge 79.2 3 6.6E-05 39.4 4.6 32 201-234 47-78 (290)
187 PRK07533 enoyl-(acyl carrier p 79.1 4.3 9.4E-05 37.3 5.5 32 201-232 11-42 (258)
188 PRK05579 bifunctional phosphop 79.0 2.5 5.3E-05 43.4 4.3 99 110-233 116-235 (399)
189 PRK12744 short chain dehydroge 78.8 2.6 5.6E-05 38.3 3.9 29 201-231 9-37 (257)
190 PRK07814 short chain dehydroge 78.6 4.1 8.8E-05 37.3 5.2 32 200-233 10-41 (263)
191 PRK06997 enoyl-(acyl carrier p 78.6 4.1 8.8E-05 37.8 5.2 32 201-232 7-38 (260)
192 PRK06484 short chain dehydroge 78.5 3.6 7.7E-05 41.6 5.2 32 200-233 269-300 (520)
193 PLN02989 cinnamyl-alcohol dehy 78.5 2.8 6E-05 39.6 4.1 30 201-232 6-35 (325)
194 TIGR01214 rmlD dTDP-4-dehydror 78.4 2.7 5.9E-05 38.6 4.0 30 202-233 1-30 (287)
195 PRK09730 putative NAD(P)-bindi 78.3 3.8 8.1E-05 36.4 4.7 29 201-231 2-30 (247)
196 PRK08217 fabG 3-ketoacyl-(acyl 78.3 3.3 7.2E-05 36.7 4.4 32 201-234 6-37 (253)
197 PRK15181 Vi polysaccharide bio 78.1 2.9 6.3E-05 40.5 4.3 31 201-233 16-46 (348)
198 PRK08219 short chain dehydroge 78.1 3.7 8E-05 35.9 4.6 30 201-233 4-33 (227)
199 TIGR01181 dTDP_gluc_dehyt dTDP 78.0 2.5 5.4E-05 38.7 3.6 30 202-233 1-32 (317)
200 PRK12367 short chain dehydroge 77.8 3 6.4E-05 38.9 4.1 32 201-234 15-46 (245)
201 PRK07831 short chain dehydroge 77.7 4.2 9.1E-05 37.0 5.0 31 201-232 18-48 (262)
202 PRK08594 enoyl-(acyl carrier p 77.6 4.4 9.6E-05 37.4 5.2 32 201-232 8-39 (257)
203 PRK07370 enoyl-(acyl carrier p 77.6 3 6.5E-05 38.5 4.0 32 201-232 7-38 (258)
204 PRK07904 short chain dehydroge 77.3 3.1 6.8E-05 38.3 4.1 31 201-233 9-40 (253)
205 TIGR02685 pter_reduc_Leis pter 77.3 3.7 7.9E-05 37.7 4.5 30 201-232 2-31 (267)
206 PRK09242 tropinone reductase; 77.3 4.7 0.0001 36.5 5.1 31 201-233 10-40 (257)
207 TIGR01829 AcAcCoA_reduct aceto 77.0 4.5 9.7E-05 35.8 4.8 32 201-234 1-32 (242)
208 PRK06172 short chain dehydroge 76.9 4.8 0.0001 36.2 5.1 31 201-233 8-38 (253)
209 PRK12859 3-ketoacyl-(acyl-carr 76.8 3.2 7E-05 37.9 4.0 32 201-232 7-38 (256)
210 TIGR02622 CDP_4_6_dhtase CDP-g 76.8 3.2 6.9E-05 39.9 4.1 31 201-233 5-35 (349)
211 PRK07792 fabG 3-ketoacyl-(acyl 76.7 4.9 0.00011 38.3 5.3 31 200-232 12-42 (306)
212 PRK06603 enoyl-(acyl carrier p 76.6 3.1 6.8E-05 38.4 3.9 33 201-233 9-41 (260)
213 PRK10217 dTDP-glucose 4,6-dehy 76.6 2.9 6.3E-05 39.9 3.7 29 201-231 2-30 (355)
214 PRK07041 short chain dehydroge 76.5 3.5 7.7E-05 36.4 4.0 29 204-234 1-29 (230)
215 COG1028 FabG Dehydrogenases wi 76.4 3.8 8.1E-05 36.8 4.2 31 199-231 4-34 (251)
216 PRK09009 C factor cell-cell si 76.3 3.5 7.5E-05 36.7 4.0 29 201-231 1-31 (235)
217 PRK08278 short chain dehydroge 76.3 3.7 8.1E-05 38.1 4.3 31 201-233 7-37 (273)
218 PRK06198 short chain dehydroge 76.2 3.4 7.4E-05 37.2 3.9 31 201-233 7-38 (260)
219 PRK07340 ornithine cyclodeamin 76.2 11 0.00024 36.9 7.7 84 145-231 61-155 (304)
220 PF01488 Shikimate_DH: Shikima 76.2 4.9 0.00011 34.5 4.7 42 199-243 11-55 (135)
221 PRK08159 enoyl-(acyl carrier p 75.8 5.3 0.00011 37.4 5.2 33 201-233 11-43 (272)
222 TIGR02114 coaB_strep phosphopa 75.8 3 6.5E-05 39.2 3.6 29 204-233 18-46 (227)
223 PLN02206 UDP-glucuronate decar 75.4 3.9 8.5E-05 42.0 4.5 31 201-233 120-150 (442)
224 PLN02778 3,5-epimerase/4-reduc 75.2 4.5 9.7E-05 38.8 4.6 35 195-231 3-38 (298)
225 PLN02653 GDP-mannose 4,6-dehyd 75.2 3.4 7.4E-05 39.4 3.8 30 201-232 7-36 (340)
226 PF02423 OCD_Mu_crystall: Orni 75.0 7.2 0.00016 38.3 6.1 141 144-291 63-225 (313)
227 PRK12748 3-ketoacyl-(acyl-carr 74.9 4.9 0.00011 36.5 4.6 33 201-233 6-38 (256)
228 PRK06123 short chain dehydroge 74.9 5.4 0.00012 35.6 4.8 29 201-231 3-31 (248)
229 PRK08415 enoyl-(acyl carrier p 74.8 5.6 0.00012 37.5 5.1 32 201-232 6-37 (274)
230 PRK07201 short chain dehydroge 74.2 5.2 0.00011 41.6 5.2 31 201-233 372-402 (657)
231 TIGR01472 gmd GDP-mannose 4,6- 73.9 4.1 8.9E-05 39.0 4.0 30 201-232 1-30 (343)
232 PF01695 IstB_IS21: IstB-like 73.9 5.4 0.00012 36.1 4.6 43 201-243 48-93 (178)
233 TIGR03589 PseB UDP-N-acetylglu 73.7 4.4 9.5E-05 39.0 4.2 31 201-233 5-37 (324)
234 PLN02572 UDP-sulfoquinovose sy 73.6 4 8.7E-05 41.7 4.1 30 201-232 48-77 (442)
235 PRK14106 murD UDP-N-acetylmura 73.4 5.1 0.00011 40.1 4.7 38 200-240 5-42 (450)
236 PRK06732 phosphopantothenate-- 73.0 4 8.6E-05 38.5 3.6 29 204-233 19-47 (229)
237 PRK06300 enoyl-(acyl carrier p 72.7 4.5 9.8E-05 39.4 4.1 34 199-232 7-40 (299)
238 TIGR01289 LPOR light-dependent 72.7 6.5 0.00014 37.7 5.1 31 201-233 4-35 (314)
239 PLN00016 RNA-binding protein; 72.6 4.2 9E-05 40.0 3.8 34 198-233 50-87 (378)
240 cd01080 NAD_bind_m-THF_DH_Cycl 72.3 7.5 0.00016 35.4 5.1 45 186-233 28-75 (168)
241 PF06057 VirJ: Bacterial virul 71.6 4.3 9.2E-05 38.5 3.5 71 199-270 2-75 (192)
242 PF01661 Macro: Macro domain; 71.2 25 0.00053 28.3 7.4 62 96-158 43-104 (118)
243 PF02254 TrkA_N: TrkA-N domain 71.1 9.4 0.0002 30.8 5.0 38 203-243 1-40 (116)
244 PRK09987 dTDP-4-dehydrorhamnos 70.9 5.1 0.00011 38.0 3.9 27 202-231 2-28 (299)
245 PRK06484 short chain dehydroge 70.8 6.9 0.00015 39.6 5.0 42 201-244 6-49 (520)
246 PLN02427 UDP-apiose/xylose syn 70.5 6.8 0.00015 38.3 4.7 35 197-233 11-46 (386)
247 PRK07775 short chain dehydroge 70.4 8.6 0.00019 35.6 5.2 30 201-232 11-40 (274)
248 smart00822 PKS_KR This enzymat 70.4 6 0.00013 32.2 3.7 30 201-232 1-31 (180)
249 PRK06720 hypothetical protein; 69.8 9.1 0.0002 34.3 5.0 32 200-233 16-47 (169)
250 KOG1205 Predicted dehydrogenas 69.5 6.5 0.00014 39.1 4.4 41 201-243 13-55 (282)
251 PLN02730 enoyl-[acyl-carrier-p 69.4 5.7 0.00012 38.9 3.9 41 200-241 9-51 (303)
252 PRK00258 aroE shikimate 5-dehy 69.2 7.2 0.00016 37.4 4.5 58 183-243 105-166 (278)
253 TIGR01500 sepiapter_red sepiap 69.0 8 0.00017 35.3 4.6 30 202-233 2-35 (256)
254 PRK09620 hypothetical protein; 68.9 7.2 0.00016 37.1 4.4 20 213-232 30-49 (229)
255 COG0169 AroE Shikimate 5-dehyd 68.5 6 0.00013 39.1 3.9 60 183-245 107-171 (283)
256 TIGR02632 RhaD_aldol-ADH rhamn 68.3 8.1 0.00018 41.9 5.2 32 200-233 414-445 (676)
257 PRK07791 short chain dehydroge 68.3 9.3 0.0002 36.0 5.0 30 201-232 7-36 (286)
258 PRK06141 ornithine cyclodeamin 68.1 30 0.00065 34.0 8.6 96 145-243 61-169 (314)
259 PTZ00381 aldehyde dehydrogenas 67.8 8.2 0.00018 40.4 4.9 48 178-231 167-214 (493)
260 PRK05599 hypothetical protein; 67.1 10 0.00023 34.6 4.9 39 202-243 2-42 (246)
261 PF02374 ArsA_ATPase: Anion-tr 66.8 7.1 0.00015 38.5 4.0 40 201-240 2-43 (305)
262 PF04321 RmlD_sub_bind: RmlD s 66.7 7.1 0.00015 37.3 3.9 32 202-235 2-33 (286)
263 cd07099 ALDH_DDALDH Methylomon 66.2 11 0.00023 38.3 5.3 47 179-231 179-225 (453)
264 KOG1502 Flavonol reductase/cin 65.8 7.5 0.00016 39.5 4.0 31 199-231 5-35 (327)
265 KOG0725 Reductases with broad 65.8 11 0.00023 36.5 4.9 31 200-232 8-38 (270)
266 PRK11150 rfaD ADP-L-glycero-D- 65.6 6.8 0.00015 36.6 3.5 27 203-231 2-28 (308)
267 cd00431 cysteine_hydrolases Cy 65.6 77 0.0017 27.0 9.7 32 199-231 109-140 (161)
268 PRK12749 quinate/shikimate deh 65.0 7.3 0.00016 38.1 3.7 93 120-234 63-156 (288)
269 PRK12377 putative replication 65.0 11 0.00024 36.4 4.8 51 193-243 94-147 (248)
270 KOG1201 Hydroxysteroid 17-beta 64.8 8.3 0.00018 38.9 4.1 36 202-239 40-77 (300)
271 PLN02174 aldehyde dehydrogenas 64.6 11 0.00024 39.7 5.1 48 178-231 170-217 (484)
272 KOG1200 Mitochondrial/plastidi 64.4 8.5 0.00019 37.7 3.9 31 200-232 14-44 (256)
273 PRK06719 precorrin-2 dehydroge 64.4 12 0.00025 33.5 4.6 41 199-242 12-52 (157)
274 cd01065 NAD_bind_Shikimate_DH 64.4 15 0.00032 31.0 5.0 32 198-232 17-49 (155)
275 TIGR00507 aroE shikimate 5-deh 64.3 10 0.00022 36.0 4.5 49 183-234 100-148 (270)
276 PRK11199 tyrA bifunctional cho 64.3 10 0.00022 38.3 4.6 43 193-237 91-133 (374)
277 PRK08261 fabG 3-ketoacyl-(acyl 64.1 15 0.00032 36.8 5.8 100 128-232 137-240 (450)
278 PF13561 adh_short_C2: Enoyl-( 63.9 10 0.00022 34.3 4.1 21 212-232 6-26 (241)
279 PRK07364 2-octaprenyl-6-methox 63.6 9.9 0.00021 37.1 4.3 44 186-233 2-48 (415)
280 TIGR00521 coaBC_dfp phosphopan 63.2 9.3 0.0002 39.3 4.2 33 200-233 185-232 (390)
281 PF00857 Isochorismatase: Isoc 63.1 77 0.0017 27.3 9.3 102 126-231 19-142 (174)
282 PRK08939 primosomal protein Dn 63.1 14 0.0003 36.6 5.2 44 200-243 156-202 (306)
283 PF01073 3Beta_HSD: 3-beta hyd 62.8 14 0.00029 35.6 5.0 65 204-284 1-67 (280)
284 PRK08125 bifunctional UDP-gluc 62.8 9.7 0.00021 40.8 4.4 33 199-233 314-347 (660)
285 PF00670 AdoHcyase_NAD: S-aden 62.4 14 0.00031 34.0 4.9 88 199-295 22-115 (162)
286 PF00258 Flavodoxin_1: Flavodo 62.1 6.8 0.00015 32.9 2.6 33 206-240 7-39 (143)
287 PRK07578 short chain dehydroge 61.9 11 0.00024 33.0 3.9 29 202-233 2-30 (199)
288 PRK05855 short chain dehydroge 61.8 16 0.00035 36.7 5.6 33 199-233 314-346 (582)
289 KOG1371 UDP-glucose 4-epimeras 61.7 9.1 0.0002 39.3 3.8 41 200-242 2-45 (343)
290 cd01075 NAD_bind_Leu_Phe_Val_D 61.6 16 0.00035 33.6 5.2 30 200-232 28-57 (200)
291 KOG2380 Prephenate dehydrogena 61.5 7.3 0.00016 40.8 3.1 135 161-314 10-174 (480)
292 PF01210 NAD_Gly3P_dh_N: NAD-d 61.4 17 0.00037 31.9 5.0 38 203-243 2-41 (157)
293 PRK08309 short chain dehydroge 61.0 16 0.00035 33.1 5.0 28 202-232 2-29 (177)
294 PRK10669 putative cation:proto 60.9 13 0.00028 39.1 4.9 43 196-241 412-457 (558)
295 PRK10084 dTDP-glucose 4,6 dehy 60.9 9 0.00019 36.6 3.4 28 202-231 2-29 (352)
296 cd07108 ALDH_MGR_2402 Magnetos 60.4 18 0.00038 37.0 5.6 54 173-231 171-224 (457)
297 PLN02203 aldehyde dehydrogenas 59.7 14 0.0003 38.8 4.8 48 178-231 166-213 (484)
298 PRK07952 DNA replication prote 59.7 21 0.00046 34.3 5.7 50 193-242 92-144 (244)
299 PRK08181 transposase; Validate 58.7 15 0.00033 35.8 4.6 44 199-242 105-151 (269)
300 PRK08324 short chain dehydroge 58.1 16 0.00036 39.3 5.2 31 201-233 423-453 (681)
301 PRK06835 DNA replication prote 57.9 18 0.0004 36.2 5.2 44 199-242 182-228 (329)
302 cd08241 QOR1 Quinone oxidoredu 57.6 43 0.00093 30.2 7.0 39 201-241 141-181 (323)
303 PRK13656 trans-2-enoyl-CoA red 57.0 16 0.00034 38.2 4.6 42 189-233 21-73 (398)
304 TIGR01809 Shik-DH-AROM shikima 57.0 16 0.00036 35.3 4.5 41 200-243 125-168 (282)
305 COG1090 Predicted nucleoside-d 56.7 10 0.00023 38.2 3.2 29 203-233 1-29 (297)
306 COG0003 ArsA Predicted ATPase 56.6 14 0.00029 37.3 4.0 39 200-238 2-42 (322)
307 cd07132 ALDH_F3AB Aldehyde deh 56.4 18 0.00039 37.1 4.9 47 179-231 159-205 (443)
308 PRK03692 putative UDP-N-acetyl 56.3 20 0.00044 34.6 5.0 51 178-231 84-135 (243)
309 PRK09496 trkA potassium transp 55.9 19 0.00042 35.9 4.9 38 202-242 2-41 (453)
310 KOG1610 Corticosteroid 11-beta 55.8 23 0.0005 36.2 5.5 46 197-244 26-73 (322)
311 PRK06718 precorrin-2 dehydroge 55.6 19 0.0004 33.4 4.5 41 199-242 9-49 (202)
312 PF02737 3HCDH_N: 3-hydroxyacy 55.3 24 0.00052 31.9 5.1 27 202-231 1-27 (180)
313 cd05286 QOR2 Quinone oxidoredu 55.0 56 0.0012 29.3 7.3 44 195-241 133-178 (320)
314 KOG4169 15-hydroxyprostaglandi 54.7 16 0.00035 36.3 4.0 43 201-245 6-53 (261)
315 PRK11440 putative hydrolase; P 54.3 1.4E+02 0.003 26.7 9.7 33 198-231 119-151 (188)
316 PF01494 FAD_binding_3: FAD bi 54.3 17 0.00037 33.5 4.0 29 202-233 3-31 (356)
317 PRK12320 hypothetical protein; 54.2 16 0.00034 40.6 4.3 30 202-233 2-31 (699)
318 PRK06526 transposase; Provisio 54.0 11 0.00025 36.1 2.9 33 201-233 99-133 (254)
319 PF09723 Zn-ribbon_8: Zinc rib 54.0 4.5 9.8E-05 29.1 0.1 9 1-9 1-9 (42)
320 PRK09260 3-hydroxybutyryl-CoA 53.9 23 0.00049 33.8 4.9 39 201-242 2-42 (288)
321 PRK06046 alanine dehydrogenase 53.8 69 0.0015 31.6 8.3 97 144-243 64-173 (326)
322 PRK05642 DNA replication initi 53.6 19 0.0004 33.8 4.2 38 201-238 46-85 (234)
323 PRK02472 murD UDP-N-acetylmura 53.6 16 0.00035 36.5 4.0 30 201-233 6-35 (447)
324 cd07559 ALDH_ACDHII_AcoD-like 53.6 23 0.0005 36.7 5.2 87 140-231 157-243 (480)
325 PRK03562 glutathione-regulated 53.4 19 0.00042 38.8 4.8 46 195-243 395-442 (621)
326 PRK08727 hypothetical protein; 53.4 20 0.00043 33.5 4.3 36 201-236 42-79 (233)
327 cd07142 ALDH_F2BC Arabidosis a 53.0 27 0.00059 36.0 5.6 54 173-231 196-250 (476)
328 PRK00141 murD UDP-N-acetylmura 52.9 20 0.00043 37.0 4.6 38 193-233 7-45 (473)
329 PRK12549 shikimate 5-dehydroge 52.7 21 0.00046 34.7 4.5 32 200-234 127-159 (284)
330 PF01583 APS_kinase: Adenylyls 52.6 23 0.0005 32.2 4.5 35 203-237 5-41 (156)
331 cd00550 ArsA_ATPase Oxyanion-t 52.5 15 0.00032 34.8 3.4 38 203-240 3-42 (254)
332 PF01113 DapB_N: Dihydrodipico 52.3 21 0.00045 30.4 3.9 28 202-231 2-30 (124)
333 PLN02260 probable rhamnose bio 52.0 19 0.0004 38.4 4.4 33 200-234 6-40 (668)
334 PRK06921 hypothetical protein; 51.8 26 0.00056 33.9 4.9 44 199-242 116-163 (266)
335 cd07145 ALDH_LactADH_F420-Bios 51.7 28 0.0006 35.5 5.4 50 178-231 182-231 (456)
336 cd07136 ALDH_YwdH-P39616 Bacil 51.7 24 0.00051 36.6 4.9 48 178-231 158-205 (449)
337 PRK12550 shikimate 5-dehydroge 51.6 12 0.00026 36.5 2.6 56 183-242 106-164 (272)
338 PLN02520 bifunctional 3-dehydr 51.5 24 0.00053 37.4 5.1 41 200-243 379-421 (529)
339 PRK06940 short chain dehydroge 51.5 29 0.00063 32.4 5.1 28 202-233 4-31 (275)
340 PLN02766 coniferyl-aldehyde de 51.5 28 0.00061 36.4 5.5 54 173-231 213-267 (501)
341 PF01266 DAO: FAD dependent ox 51.2 22 0.00047 32.8 4.2 31 202-235 1-31 (358)
342 PRK11908 NAD-dependent epimera 51.1 19 0.00042 34.5 4.0 31 201-233 2-33 (347)
343 PF04127 DFP: DNA / pantothena 51.1 18 0.00038 33.5 3.6 20 213-232 30-49 (185)
344 PF03853 YjeF_N: YjeF-related 50.9 21 0.00045 32.0 3.9 41 191-231 15-57 (169)
345 PRK08116 hypothetical protein; 50.9 28 0.0006 33.6 5.0 42 202-243 116-160 (268)
346 TIGR02032 GG-red-SF geranylger 50.6 18 0.00039 32.8 3.5 33 202-237 2-34 (295)
347 PRK06035 3-hydroxyacyl-CoA deh 49.9 32 0.0007 32.8 5.2 30 200-232 3-32 (291)
348 PF02719 Polysacc_synt_2: Poly 49.8 23 0.00051 35.4 4.4 34 203-238 1-35 (293)
349 cd07110 ALDH_F10_BADH Arabidop 49.8 33 0.00073 35.0 5.6 53 174-231 176-228 (456)
350 TIGR02197 heptose_epim ADP-L-g 49.6 16 0.00035 33.8 3.1 28 203-232 1-29 (314)
351 COG0275 Predicted S-adenosylme 49.6 4.7 0.0001 40.9 -0.5 127 150-284 101-239 (314)
352 cd01012 YcaC_related YcaC rela 49.5 70 0.0015 27.9 6.9 90 132-231 21-118 (157)
353 PRK08306 dipicolinate synthase 49.3 27 0.00058 34.2 4.7 32 200-234 152-183 (296)
354 cd01014 nicotinamidase_related 49.0 92 0.002 27.1 7.5 33 198-231 97-129 (155)
355 PF03033 Glyco_transf_28: Glyc 48.9 19 0.00041 29.6 3.1 28 215-242 15-42 (139)
356 PRK08773 2-octaprenyl-3-methyl 48.8 26 0.00056 34.2 4.5 35 198-235 4-38 (392)
357 TIGR01915 npdG NADPH-dependent 48.7 36 0.00077 31.3 5.1 39 202-242 2-42 (219)
358 PF02558 ApbA: Ketopantoate re 48.3 40 0.00087 28.4 5.0 38 203-243 1-39 (151)
359 cd07134 ALDH_AlkH-like Pseudom 48.0 33 0.00071 35.1 5.2 47 179-231 159-205 (433)
360 PRK11259 solA N-methyltryptoph 47.7 23 0.0005 34.0 3.9 31 202-235 5-35 (376)
361 cd07114 ALDH_DhaS Uncharacteri 47.7 38 0.00082 34.6 5.6 54 173-231 174-227 (457)
362 PF03446 NAD_binding_2: NAD bi 47.7 41 0.00089 29.5 5.2 102 201-312 2-124 (163)
363 PLN02260 probable rhamnose bio 47.6 21 0.00046 38.0 3.9 29 201-231 381-409 (668)
364 PRK09183 transposase/IS protei 47.5 27 0.00059 33.4 4.3 41 201-241 103-146 (259)
365 cd07101 ALDH_SSADH2_GabD2 Myco 47.4 32 0.0007 35.1 5.1 51 173-231 173-224 (454)
366 PLN00093 geranylgeranyl diphos 47.3 27 0.00058 36.1 4.5 42 190-234 29-70 (450)
367 cd08289 MDR_yhfp_like Yhfp put 47.2 39 0.00085 31.4 5.2 42 199-242 146-189 (326)
368 cd07119 ALDH_BADH-GbsA Bacillu 47.0 36 0.00078 35.1 5.4 54 173-231 189-242 (482)
369 cd05188 MDR Medium chain reduc 47.0 1.3E+02 0.0027 26.6 8.2 39 200-241 135-175 (271)
370 cd07093 ALDH_F8_HMSADH Human a 47.0 34 0.00073 34.8 5.1 30 199-231 196-225 (455)
371 PLN00015 protochlorophyllide r 46.8 25 0.00054 33.5 4.0 28 204-233 1-29 (308)
372 cd07087 ALDH_F3-13-14_CALDH-li 46.7 33 0.00071 34.9 5.0 47 179-231 159-205 (426)
373 PRK07201 short chain dehydroge 46.7 31 0.00066 36.1 4.9 30 202-233 2-33 (657)
374 PRK07530 3-hydroxybutyryl-CoA 46.5 37 0.0008 32.4 5.0 37 201-240 5-43 (292)
375 PRK00676 hemA glutamyl-tRNA re 46.4 27 0.00058 35.7 4.3 88 131-233 109-205 (338)
376 PLN02725 GDP-4-keto-6-deoxyman 46.3 13 0.00028 34.3 1.9 26 204-231 1-26 (306)
377 COG3967 DltE Short-chain dehyd 46.3 34 0.00073 33.8 4.7 43 201-245 6-50 (245)
378 TIGR02278 PaaN-DH phenylacetic 46.2 39 0.00084 37.0 5.7 51 173-231 200-252 (663)
379 cd07086 ALDH_F7_AASADH-like NA 46.2 37 0.0008 35.1 5.3 53 173-231 192-244 (478)
380 cd07116 ALDH_ACDHII-AcoD Ralst 46.1 41 0.00089 34.7 5.7 54 173-231 190-243 (479)
381 PRK08013 oxidoreductase; Provi 45.8 26 0.00057 34.6 4.1 32 201-235 4-35 (400)
382 TIGR00715 precor6x_red precorr 45.8 23 0.00049 34.4 3.5 27 202-231 2-28 (256)
383 cd07104 ALDH_BenzADH-like ALDH 45.7 41 0.00089 33.8 5.4 29 199-230 178-206 (431)
384 PRK06522 2-dehydropantoate 2-r 45.5 41 0.00089 31.5 5.1 39 202-243 2-42 (304)
385 TIGR01804 BADH glycine betaine 45.3 39 0.00084 34.7 5.3 54 173-231 188-241 (467)
386 cd07131 ALDH_AldH-CAJ73105 Unc 45.1 41 0.0009 34.5 5.5 54 173-231 190-243 (478)
387 cd07105 ALDH_SaliADH Salicylal 45.0 40 0.00087 34.2 5.3 31 198-231 179-209 (432)
388 cd03522 MoeA_like MoeA_like. T 44.9 31 0.00068 34.6 4.4 113 98-244 90-212 (312)
389 PRK14192 bifunctional 5,10-met 44.8 41 0.00089 33.2 5.2 36 196-233 155-190 (283)
390 cd07117 ALDH_StaphAldA1 Unchar 44.7 41 0.00088 34.9 5.4 53 173-231 190-243 (475)
391 PF08643 DUF1776: Fungal famil 44.7 32 0.00069 34.6 4.4 42 202-244 5-48 (299)
392 cd05311 NAD_bind_2_malic_enz N 44.4 22 0.00047 33.6 3.1 44 188-234 8-59 (226)
393 PRK09004 FMN-binding protein M 44.3 24 0.00052 31.0 3.2 48 206-261 12-60 (146)
394 TIGR01377 soxA_mon sarcosine o 44.3 26 0.00057 33.6 3.7 31 202-235 2-32 (380)
395 PRK06129 3-hydroxyacyl-CoA deh 44.2 39 0.00085 32.7 4.9 37 201-240 3-41 (308)
396 PF03808 Glyco_tran_WecB: Glyc 44.0 22 0.00047 32.0 2.9 64 180-246 29-99 (172)
397 cd07097 ALDH_KGSADH-YcbD Bacil 44.0 43 0.00094 34.5 5.4 53 173-231 190-243 (473)
398 PLN02467 betaine aldehyde dehy 43.9 43 0.00093 35.2 5.5 54 173-231 206-259 (503)
399 PRK05714 2-octaprenyl-3-methyl 43.9 30 0.00064 34.0 4.1 31 201-234 3-33 (405)
400 PRK11241 gabD succinate-semial 43.5 50 0.0011 34.5 5.8 60 167-231 194-254 (482)
401 cd07124 ALDH_PutA-P5CDH-RocA D 43.3 44 0.00094 35.0 5.4 54 173-231 221-280 (512)
402 TIGR01238 D1pyr5carbox3 delta- 43.0 47 0.001 34.9 5.6 88 139-231 180-271 (500)
403 PRK13508 tagatose-6-phosphate 42.8 35 0.00076 32.3 4.3 95 137-245 204-305 (309)
404 PRK07417 arogenate dehydrogena 42.8 42 0.00092 32.0 4.8 37 202-241 2-40 (279)
405 PRK00421 murC UDP-N-acetylmura 42.8 33 0.00072 35.0 4.3 31 201-234 8-39 (461)
406 KOG1203 Predicted dehydrogenas 42.8 29 0.00062 36.5 3.9 52 178-231 56-108 (411)
407 cd08253 zeta_crystallin Zeta-c 42.7 71 0.0015 28.9 6.0 44 195-241 141-186 (325)
408 PRK13252 betaine aldehyde dehy 42.7 48 0.001 34.4 5.5 53 173-231 197-249 (488)
409 cd07103 ALDH_F5_SSADH_GabD Mit 42.5 48 0.001 33.6 5.4 53 174-231 173-225 (451)
410 cd07115 ALDH_HMSADH_HapE Pseud 42.5 50 0.0011 33.7 5.5 30 199-231 196-225 (453)
411 TIGR02371 ala_DH_arch alanine 42.5 1.4E+02 0.0031 29.6 8.6 97 144-243 63-172 (325)
412 PRK12266 glpD glycerol-3-phosp 42.5 29 0.00062 36.2 3.9 36 199-237 5-40 (508)
413 TIGR00658 orni_carb_tr ornithi 42.5 75 0.0016 31.5 6.6 94 143-238 61-184 (304)
414 cd02034 CooC The accessory pro 42.3 36 0.00078 28.9 3.8 34 203-236 2-37 (116)
415 PRK12409 D-amino acid dehydrog 42.3 31 0.00067 34.0 3.9 33 201-236 2-34 (410)
416 PRK13982 bifunctional SbtC-lik 42.2 24 0.00052 37.5 3.4 22 212-233 282-303 (475)
417 PRK05865 hypothetical protein; 42.1 31 0.00067 39.2 4.4 30 202-233 2-31 (854)
418 cd07102 ALDH_EDX86601 Uncharac 42.1 50 0.0011 33.5 5.5 53 173-231 171-223 (452)
419 PRK09126 hypothetical protein; 41.8 27 0.00059 33.9 3.4 32 201-235 4-35 (392)
420 cd07091 ALDH_F1-2_Ald2-like AL 41.8 53 0.0011 33.8 5.6 54 173-231 196-250 (476)
421 PF03807 F420_oxidored: NADP o 41.7 75 0.0016 24.8 5.3 40 203-245 2-47 (96)
422 TIGR02605 CxxC_CxxC_SSSS putat 41.6 9.2 0.0002 27.8 0.1 8 1-8 1-8 (52)
423 cd06216 FNR_iron_sulfur_bindin 41.4 45 0.00096 30.6 4.6 61 171-236 176-242 (243)
424 TIGR02992 ectoine_eutC ectoine 41.4 96 0.0021 30.6 7.2 98 144-244 63-174 (326)
425 cd01983 Fer4_NifH The Fer4_Nif 41.4 51 0.0011 24.3 4.2 21 213-233 14-34 (99)
426 cd07128 ALDH_MaoC-N N-terminal 41.3 51 0.0011 34.9 5.6 109 113-231 139-252 (513)
427 PRK11563 bifunctional aldehyde 41.2 47 0.001 36.3 5.4 105 112-231 142-256 (675)
428 PRK13912 nuclease NucT; Provis 41.2 1E+02 0.0022 27.7 6.8 102 134-243 59-166 (177)
429 PRK14027 quinate/shikimate deh 41.1 39 0.00084 33.1 4.4 31 200-233 127-158 (283)
430 cd07113 ALDH_PADH_NahF Escheri 41.1 45 0.00098 34.4 5.1 53 173-231 197-249 (477)
431 cd07138 ALDH_CddD_SSP0762 Rhod 41.0 57 0.0012 33.5 5.7 49 179-231 190-238 (466)
432 PRK06849 hypothetical protein; 40.9 43 0.00093 33.2 4.7 34 200-235 4-37 (389)
433 PRK06130 3-hydroxybutyryl-CoA 40.8 56 0.0012 31.3 5.3 39 201-242 5-45 (311)
434 PF08659 KR: KR domain; Inter 40.7 41 0.00088 29.9 4.1 29 203-233 3-32 (181)
435 PRK04308 murD UDP-N-acetylmura 40.7 34 0.00075 34.5 4.1 30 201-233 6-35 (445)
436 cd08345 Fosfomycin_RP Fosfomyc 40.7 70 0.0015 24.8 5.0 47 134-185 66-112 (113)
437 COG0569 TrkA K+ transport syst 40.7 77 0.0017 29.8 6.1 30 201-233 1-30 (225)
438 cd07107 ALDH_PhdK-like Nocardi 40.6 59 0.0013 33.3 5.7 52 174-231 171-223 (456)
439 cd07088 ALDH_LactADH-AldA Esch 40.6 51 0.0011 33.7 5.3 52 176-231 190-241 (468)
440 cd05276 p53_inducible_oxidored 40.6 1E+02 0.0022 27.7 6.7 42 196-240 137-180 (323)
441 COG3320 Putative dehydrogenase 40.5 40 0.00087 35.2 4.5 93 201-302 1-124 (382)
442 PRK13473 gamma-aminobutyraldeh 40.5 53 0.0011 33.8 5.4 89 138-231 157-245 (475)
443 PRK00779 ornithine carbamoyltr 40.5 88 0.0019 31.1 6.8 95 142-238 64-188 (304)
444 PRK08291 ectoine utilization p 40.5 1.2E+02 0.0026 30.0 7.7 96 145-243 67-176 (330)
445 PRK14175 bifunctional 5,10-met 40.4 51 0.0011 32.9 5.1 44 187-232 140-188 (286)
446 TIGR03574 selen_PSTK L-seryl-t 40.2 46 0.001 31.0 4.5 35 203-237 2-38 (249)
447 cd07106 ALDH_AldA-AAD23400 Str 40.2 51 0.0011 33.5 5.2 52 174-231 169-220 (446)
448 cd07144 ALDH_ALD2-YMR170C Sacc 40.1 61 0.0013 33.5 5.8 91 136-231 161-252 (484)
449 COG0529 CysC Adenylylsulfate k 40.1 58 0.0013 31.4 5.2 39 197-235 20-60 (197)
450 cd07090 ALDH_F9_TMBADH NAD+-de 40.1 49 0.0011 33.8 5.1 30 199-231 194-223 (457)
451 PF13580 SIS_2: SIS domain; PD 40.0 26 0.00056 30.2 2.7 25 129-153 112-136 (138)
452 cd07109 ALDH_AAS00426 Uncharac 40.0 54 0.0012 33.5 5.3 48 179-231 177-225 (454)
453 PRK05868 hypothetical protein; 39.9 34 0.00073 33.8 3.8 30 201-233 2-31 (372)
454 PRK08293 3-hydroxybutyryl-CoA 39.8 57 0.0012 31.2 5.2 39 200-241 3-43 (287)
455 cd06209 BenDO_FAD_NAD Benzoate 39.6 57 0.0012 29.5 4.9 54 171-228 156-218 (228)
456 cd05195 enoyl_red enoyl reduct 39.6 1.6E+02 0.0035 25.9 7.6 40 201-242 110-151 (293)
457 cd07118 ALDH_SNDH Gluconobacte 39.5 58 0.0013 33.4 5.5 29 199-230 198-226 (454)
458 PRK08020 ubiF 2-octaprenyl-3-m 39.4 37 0.0008 33.0 3.9 32 201-235 6-37 (391)
459 cd07130 ALDH_F7_AASADH NAD+-de 39.3 50 0.0011 34.1 5.1 48 179-231 196-243 (474)
460 cd02035 ArsA ArsA ATPase funct 39.1 38 0.00083 31.1 3.8 35 203-237 2-38 (217)
461 PLN02545 3-hydroxybutyryl-CoA 39.1 57 0.0012 31.2 5.1 30 200-232 4-33 (295)
462 PLN02419 methylmalonate-semial 39.0 51 0.0011 36.0 5.2 81 140-231 270-356 (604)
463 PF13241 NAD_binding_7: Putati 38.7 45 0.00097 27.4 3.8 35 199-236 6-40 (103)
464 cd05191 NAD_bind_amino_acid_DH 38.6 73 0.0016 25.1 4.9 33 198-233 21-54 (86)
465 TIGR01470 cysG_Nterm siroheme 38.5 50 0.0011 30.8 4.4 33 200-235 9-41 (205)
466 PRK07688 thiamine/molybdopteri 38.3 38 0.00083 34.0 3.9 33 200-235 24-57 (339)
467 PRK07667 uridine kinase; Provi 38.3 39 0.00085 30.5 3.7 38 201-238 18-57 (193)
468 PRK01438 murD UDP-N-acetylmura 38.3 57 0.0012 33.3 5.2 31 200-233 16-46 (480)
469 cd07133 ALDH_CALDH_CalB Conife 38.3 58 0.0013 33.3 5.3 29 200-231 178-206 (434)
470 cd05288 PGDH Prostaglandin deh 38.2 82 0.0018 29.3 5.9 44 196-242 143-188 (329)
471 PLN02464 glycerol-3-phosphate 37.7 36 0.00078 36.8 3.9 37 199-238 70-106 (627)
472 cd07085 ALDH_F6_MMSDH Methylma 37.7 52 0.0011 34.0 4.8 53 173-231 191-243 (478)
473 PF00455 DeoRC: DeoR C termina 37.5 68 0.0015 28.6 5.0 42 189-235 10-52 (161)
474 smart00834 CxxC_CXXC_SSSS Puta 37.5 12 0.00026 25.7 0.1 7 1-7 1-7 (41)
475 PLN02527 aspartate carbamoyltr 37.3 1.2E+02 0.0026 30.3 7.1 96 143-238 61-190 (306)
476 cd06184 flavohem_like_fad_nad_ 37.3 63 0.0014 29.6 4.9 39 187-228 196-234 (247)
477 TIGR03364 HpnW_proposed FAD de 37.2 40 0.00087 32.4 3.8 31 202-235 2-32 (365)
478 cd07100 ALDH_SSADH1_GabD1 Myco 37.2 60 0.0013 33.0 5.2 19 213-231 221-239 (429)
479 PRK13968 putative succinate se 37.1 64 0.0014 33.4 5.4 30 199-231 204-233 (462)
480 PRK12475 thiamine/molybdopteri 37.1 39 0.00085 33.9 3.8 33 200-235 24-57 (338)
481 TIGR03216 OH_muco_semi_DH 2-hy 37.1 69 0.0015 33.1 5.7 30 199-231 219-248 (481)
482 PRK00711 D-amino acid dehydrog 37.0 45 0.00097 32.7 4.1 31 202-235 2-32 (416)
483 TIGR03374 ABALDH 1-pyrroline d 37.0 63 0.0014 33.6 5.3 53 173-231 191-244 (472)
484 cd07152 ALDH_BenzADH NAD-depen 36.9 58 0.0013 33.1 5.0 23 171-194 185-207 (443)
485 PRK07236 hypothetical protein; 36.8 51 0.0011 32.3 4.4 33 199-234 5-37 (386)
486 PLN02466 aldehyde dehydrogenas 36.8 61 0.0013 34.5 5.3 54 173-231 250-304 (538)
487 PRK06185 hypothetical protein; 36.7 40 0.00086 33.0 3.7 32 201-235 7-38 (407)
488 cd07151 ALDH_HBenzADH NADP+-de 36.6 66 0.0014 33.1 5.4 53 173-231 186-239 (465)
489 cd05211 NAD_bind_Glu_Leu_Phe_V 36.5 51 0.0011 31.1 4.3 32 199-233 22-53 (217)
490 cd05280 MDR_yhdh_yhfp Yhdh and 36.2 78 0.0017 29.2 5.3 41 199-241 146-188 (325)
491 PRK11903 aldehyde dehydrogenas 36.2 65 0.0014 34.2 5.4 104 114-231 144-256 (521)
492 PRK07494 2-octaprenyl-6-methox 36.1 43 0.00092 32.6 3.8 32 201-235 8-39 (388)
493 TIGR02853 spore_dpaA dipicolin 36.1 48 0.001 32.4 4.2 32 200-234 151-182 (287)
494 cd07083 ALDH_P5CDH ALDH subfam 35.9 68 0.0015 33.5 5.4 53 173-231 209-268 (500)
495 cd07139 ALDH_AldA-Rv0768 Mycob 35.9 65 0.0014 33.1 5.2 53 173-231 192-244 (471)
496 TIGR03443 alpha_am_amid L-amin 35.7 58 0.0013 37.4 5.3 30 200-231 971-1004(1389)
497 PRK03659 glutathione-regulated 35.4 55 0.0012 35.2 4.8 41 199-242 399-441 (601)
498 TIGR03240 arg_catab_astD succi 35.4 58 0.0013 33.8 4.8 53 173-231 187-240 (484)
499 TIGR01988 Ubi-OHases Ubiquinon 35.3 43 0.00092 32.0 3.6 31 202-235 1-31 (385)
500 cd05284 arabinose_DH_like D-ar 35.2 72 0.0016 30.0 5.0 40 200-242 168-210 (340)
No 1
>PLN02869 fatty aldehyde decarbonylase
Probab=100.00 E-value=7.7e-164 Score=1256.44 Aligned_cols=355 Identities=67% Similarity=1.170 Sum_probs=347.2
Q ss_pred CCcchhhccccCCCchHHHHHHhhcCCCccccccCCCCeEEeecCCCccccccchhhhhhhccCCcccccCCcceeehhh
Q 017172 1 MPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLL 80 (376)
Q Consensus 1 MPlyDyiygT~dksSd~Lye~~l~~~~~~~~~~~e~pDvVhLtHlt~~~Siyhlr~gf~s~As~P~~~~~~~~~w~l~~l 80 (376)
||+||+|+||+|++||++||++++++ |++||||||||+||++|+||+|||||||||.||+ ++||||+|
T Consensus 263 F~~WDrLFGT~d~~s~~l~e~~~~~~-------~~~pd~V~l~H~t~~~s~~h~~~~~~s~as~p~~-----~~~~l~~~ 330 (620)
T PLN02869 263 MPIYDYIYGTMDKSSDTLYEKSLKRP-------EEIPDVVHLTHLTTPDSIYHLRLGFASLASKPYI-----SKWYLRLM 330 (620)
T ss_pred hHHHHhccCCCCCCchhHHHHhhcCc-------ccCCCEEEEeccCCHHHhhccchHHHHhccCCcc-----chhHHHHH
Confidence 69999999999999999999999444 6799999999999999999999999999999999 99999999
Q ss_pred hhHHHHHHHHHHHHhcceEEEeecccCceeceeEEeeccCceeccchhhhHHHHHHHHHHHHHHhcCCeEEeeccccccc
Q 017172 81 WPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGE 160 (376)
Q Consensus 81 wP~a~~~~m~l~w~~~~~Fv~e~~~l~kl~~qtWviPRy~fqY~l~~~~~~IN~lIE~AIl~Ad~~GvKVlSLGlLNq~e 160 (376)
||++ +++|+++|+|||+|++|+|+|||+++|||+||||+|||++|+++++||++||+||+|||++||||||||+|||||
T Consensus 331 wp~~-~~~m~~~w~~~~~f~~~~~~~~~~~~~tw~vpr~~~qy~~~~~~~~in~~Ie~ail~ad~~Gvkv~sLg~LNk~~ 409 (620)
T PLN02869 331 WPVT-SWSMMLTWIYGRTFVLERNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIEEAILEADKRGVKVLSLGLLNQGE 409 (620)
T ss_pred HHHH-HHHHHHHHHhCCceEeeeeeccceeeeEEEeccccccccCchhhhhHHHHHHHHHHHHHhcCCEEEechhcchhh
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccceeeeccCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEeechhHHHHH
Q 017172 161 ELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKL 240 (376)
Q Consensus 161 ~LN~~G~l~v~k~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~~~~l 240 (376)
+|||||||||+||| +||||||||||||||||||+||+||+||||||++ ||||||||+|||||||||+++|+|||++|
T Consensus 410 ~LN~~G~l~v~k~p-~L~vrvv~G~tLtaAvvln~ip~~~~~vfl~G~~--sK~~raia~~lc~r~i~~~t~~~~~~~~~ 486 (620)
T PLN02869 410 ELNRYGELYIHRNP-KLKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGNL--SKVAYFIASALCQRGIQVATFREDEYEKL 486 (620)
T ss_pred hhcCCceEeeecCC-CcceEEEeCCchHHHHHHHhcCCCCceEEEecCc--cHHHHHHHHHHHhcCCeEeecCHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999 59999999999999999777999999999
Q ss_pred hhcCch-hhccceeeecccccCcceEEEEcCCCCHHHhhcCCCCceeeecccCCCcCccCCccccccCcccCCCCCCccc
Q 017172 241 KLRIPV-EAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMH 319 (376)
Q Consensus 241 ~~~~p~-~~~~~Lv~~t~y~a~~~K~WlVG~~l~~~eQ~~Ap~Gt~FipfsqfPp~~~R~DCtY~~tpAM~~P~~~~~l~ 319 (376)
|+|+|+ |+|+||+|+||| +||+||||||+|++||+|||+||+|||||||||+++||||||++||||++||++||+|
T Consensus 487 ~~~~~~~~~~~~l~~~~~~---~~k~w~vg~~~~~~eq~~A~~gt~f~~~~~~p~~~~R~dC~Y~~~pam~~p~~~~~~~ 563 (620)
T PLN02869 487 NKKLPNTECGSKLLLSKNY---SEKIWLVGDGLTEEEQKKASKGTLFIPFSQFPPKRLRKDCFYHTTPAMMSPKSFENVD 563 (620)
T ss_pred HHhccchhhhhhEEEeecc---CceeEEecCCCCHHHHhhCCCCCeecccccCCchhhhccccccCCccccCChhhcccc
Confidence 999999 899999999999 8899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccccchhhhhcceeecccCCCCcccCCcc-cchHHHHHHHHHcCCccCCCC
Q 017172 320 SCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTM-CDIHQVWHASLRHGFRPLFPV 375 (376)
Q Consensus 320 sCE~~lpR~vmsAchagGivHaLEgW~~hE~G~id-~~id~vW~AAl~hGF~p~~~~ 375 (376)
||||||||||||||||||||||||||++|||| || ++||+||+|||+|||+|+...
T Consensus 564 sce~~l~r~v~~a~~~~givh~legw~~he~g-~~v~~id~~W~aal~hgf~p~~~~ 619 (620)
T PLN02869 564 SCENWLPRRAMSAWRVAGILHALEGWNVHECG-YTMFDIEKIWEASLQHGFRPLLIP 619 (620)
T ss_pred hhhccccchhhhHhhhcceeeeecCccccccc-cccccHHHHHHHHHHcCCccCCCC
Confidence 99999999999999999999999999999999 88 999999999999999997643
No 2
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=100.00 E-value=7.8e-89 Score=607.87 Aligned_cols=163 Identities=62% Similarity=1.100 Sum_probs=160.2
Q ss_pred EEEeccCCchhHHHHHHHHHhcCCcEEEeechhHHHHHhhcCchhhccceeeecccccCcceEEEEcCCCCHHHhhcCCC
Q 017172 203 VLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPK 282 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~~~~l~~~~p~~~~~~Lv~~t~y~a~~~K~WlVG~~l~~~eQ~~Ap~ 282 (376)
|||+|++ ||||||||+|||||||||+|+|+|+|++||+++|+|+|+||+|+++|++ |+||||||||++||+|||+
T Consensus 1 V~L~G~~--sKvaraiA~~LC~rgv~V~m~~~~~y~~lk~~~~~~~~~~Lv~~~~~~~---K~WlVGd~l~~~EQ~~Ap~ 75 (164)
T PF12076_consen 1 VFLTGNT--SKVARAIALALCRRGVQVVMLSKERYESLKSEAPEECQSNLVQSTSYQA---KTWLVGDGLTEEEQKWAPK 75 (164)
T ss_pred Ceecccc--cHHHHHHHHHHHhcCCEEEEecHHHHHHHHHHcCHHhhccEEeecCCCc---eeEEeCCCCCHHHHhcCCC
Confidence 7999999 6999999999999999999999999999999999999999999999966 9999999999999999999
Q ss_pred CceeeecccCCCcCccCCccccccCcccCCCCCCccchhhhhcccccchhhhhcceeecccCCCCcccCCcc-cchHHHH
Q 017172 283 GTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTM-CDIHQVW 361 (376)
Q Consensus 283 Gt~FipfsqfPp~~~R~DCtY~~tpAM~~P~~~~~l~sCE~~lpR~vmsAchagGivHaLEgW~~hE~G~id-~~id~vW 361 (376)
||+|||||||||+++||||||++||||++|++++|+|||||||||||||||||||||||||||++|||| +| ++||+||
T Consensus 76 Gt~FipfsqfP~~~~RkDC~Y~~tPAM~~P~~~~nl~sCEnwlpRrVmsAwr~aGivHaLEgW~~HEcG-~~v~~idkvW 154 (164)
T PF12076_consen 76 GTHFIPFSQFPPKKVRKDCTYHSTPAMKVPKSMENLHSCENWLPRRVMSAWRAAGIVHALEGWNHHECG-DDVDRIDKVW 154 (164)
T ss_pred CCEEeeccCCCcHHHhCCCcccCcccccCChhhhhhhhhhccchhhHHHHHhhhhhhhhhcCCcccccC-cccccHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 55 9999999
Q ss_pred HHHHHcCCcc
Q 017172 362 HASLRHGFRP 371 (376)
Q Consensus 362 ~AAl~hGF~p 371 (376)
+|||+|||+|
T Consensus 155 ~AAl~HGF~P 164 (164)
T PF12076_consen 155 EAALKHGFRP 164 (164)
T ss_pred HHHHHcCCCC
Confidence 9999999998
No 3
>PRK14982 acyl-ACP reductase; Provisional
Probab=99.54 E-value=1e-13 Score=136.91 Aligned_cols=298 Identities=15% Similarity=0.191 Sum_probs=193.6
Q ss_pred eEEeecCCCcccccc--chhhhhhhccCCcccccCCcceeehhhhhHHHHHHHHHHHHhcceEEEeecccCce---ecee
Q 017172 39 VVHLTHLTTPESIYH--LRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKL---KLQT 113 (376)
Q Consensus 39 vVhLtHlt~~~Siyh--lr~gf~s~As~P~~~~~~~~~w~l~~lwP~a~~~~m~l~w~~~~~Fv~e~~~l~kl---~~qt 113 (376)
|.||.|+|++++.=+ ..+||+. |. |-. +. .|....+|++++-+++-- ..+-
T Consensus 2 f~fi~H~~~~~~~~~~~~~~~~~~-----~~--------------~~~-l~----~~~~~~p~~~~~~~v~S~~g~~~eg 57 (340)
T PRK14982 2 FGLIGHLTSLEHAQRVARELGYDE-----YA--------------DQD-LD----FWCSAPPQLVDHIEVTSATGQTIEG 57 (340)
T ss_pred EEEEeccCCHHHhHHHHhcCCccc-----cC--------------hHh-HH----HHhhCCCeEeeeEEEEeCCCCEEEE
Confidence 789999999987542 2333311 11 222 11 144457888888887544 4477
Q ss_pred EEe--eccCceeccchhhhHHHHHHHHHHHHHHhcCCeEEeecccccccccccccceee-eccCCCccE---EEEcCCce
Q 017172 114 WVV--PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYL-ERQPNKLKI---KVVDGSSL 187 (376)
Q Consensus 114 Wvi--PRy~fqY~l~~~~~~IN~lIE~AIl~Ad~~GvKVlSLGlLNq~e~LN~~G~l~v-~k~P~~Lrv---rVVdGstL 187 (376)
|.| |--+=|- .....+..=+.|.+|+..|++.|++|..||....--. +++.+.. ++-+ ++.+ ++-.|||+
T Consensus 58 ~~i~~~~~pe~l-~~~~~~~~~~~~~~a~~~a~~~G~~i~~Lg~~tsiv~--~~~~~~~~~~~r-~i~ie~~~~TtGNs~ 133 (340)
T PRK14982 58 KYIESCFLPEML-SNRRFKTARRKVLNAMALAQKKGINITALGGFSSIIF--ENFNLLQHKQVR-NTTLEWERFTTGNTH 133 (340)
T ss_pred EEEeCCCCHHHH-hccChHHHHHHHHHHHHHHHHCCCeEEEcCChHHHhc--CCcccccccccc-cceeccccccCCchh
Confidence 776 3333233 3323444446788899999999999999999876332 2223322 2334 6667 78999999
Q ss_pred ehhhhhhcCCc---------CCceEEEeccCCchhHHHHHHHHHhcC-Cc-EEEeech--hHHHHHhhcCchhhccceee
Q 017172 188 AAAVVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLCQM-GI-KVATICK--DDYEKLKLRIPVEAQHNLVL 254 (376)
Q Consensus 188 taAvVln~IP~---------~t~eVfL~G~~~~sKv~~AiA~~LC~r-gv-~V~m~s~--~~~~~l~~~~p~~~~~~Lv~ 254 (376)
||++....+.. .-+.|++||+++ .+|+.+|..|+++ |+ ++++.+. ++-+.++.+... ..+..
T Consensus 134 T~~ll~~~V~la~~~lg~~l~~k~VLVtGAtG--~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~---~~i~~ 208 (340)
T PRK14982 134 TAYVICRQVEQNAPRLGIDLSKATVAVVGATG--DIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG---GKILS 208 (340)
T ss_pred HHHHHHHHHHHhHHHhccCcCCCEEEEEccCh--HHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc---ccHHh
Confidence 99998876632 346899999997 9999999999864 65 6666443 345555554321 11111
Q ss_pred ec-ccccCcceEEEEcC----CCCHHHhhcCCCCceeeecccCCCcC----ccCCccccccCcccCCCCCC-ccch-hhh
Q 017172 255 ST-SYAAHKTKIWLVGD----DLTGKEQARAPKGTIFIPYTQIPPRK----LRKDCFYHSTPAMIIPPSLS-NMHS-CEN 323 (376)
Q Consensus 255 ~t-~y~a~~~K~WlVG~----~l~~~eQ~~Ap~Gt~FipfsqfPp~~----~R~DCtY~~tpAM~~P~~~~-~l~s-CE~ 323 (376)
.. .+.....=+++.|- .++++ . ..+|..++-.. +|... -|.|+.+..-=-..+|-++. ++.+ .+.
T Consensus 209 l~~~l~~aDiVv~~ts~~~~~~I~~~-~--l~~~~~viDiA-vPRDVd~~v~~~~V~v~~gG~V~~p~~vd~~l~~~v~~ 284 (340)
T PRK14982 209 LEEALPEADIVVWVASMPKGVEIDPE-T--LKKPCLMIDGG-YPKNLDTKVQGPGIHVLKGGIVEHSLDIDWKIMEIAEM 284 (340)
T ss_pred HHHHHccCCEEEECCcCCcCCcCCHH-H--hCCCeEEEEec-CCCCCCcccCCCCEEEEeCCccccCCCcCccHHHHHhc
Confidence 11 11111111133332 24443 2 25788888888 77661 34666665555556787777 5533 445
Q ss_pred hcccccchhhhhcceeecccCCCCc-ccC--Ccc-cchHHHHHHHHHcCCccCC
Q 017172 324 WLGRRVMSAWRIAGIIHALEGWDLN-ECG--QTM-CDIHQVWHASLRHGFRPLF 373 (376)
Q Consensus 324 ~lpR~vmsAchagGivHaLEgW~~h-E~G--~id-~~id~vW~AAl~hGF~p~~ 373 (376)
-+|.|.+.||-|--||=+||||.+| =.| .|. ++|+.+=+.|.||||+|+.
T Consensus 285 ~~~~r~~~Ac~AEtiiL~leg~~~~fS~Gr~~i~~~~v~~i~~~a~kHGf~~~~ 338 (340)
T PRK14982 285 DNPQRQMFACFAEAMLLEFEGCHTNFSWGRNQITLEKMEFIGEASVKHGFSPLL 338 (340)
T ss_pred cchhhHHHHHHHHHHHHHhcCCccCCCcCccccCHHHHHHHHHHHHHcCCcccc
Confidence 6999999999999999999999555 568 487 9999999999999999965
No 4
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=98.03 E-value=8.1e-05 Score=73.80 Aligned_cols=228 Identities=21% Similarity=0.248 Sum_probs=139.3
Q ss_pred hhhhHHHHHHHHHHHHHHhcCCeEEeecccccccccccccceee-eccCCCccEEEEcCCceehhhhhhcCCc-----C-
Q 017172 127 WRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYL-ERQPNKLKIKVVDGSSLAAAVVVNSLPK-----T- 199 (376)
Q Consensus 127 ~~~~~IN~lIE~AIl~Ad~~GvKVlSLGlLNq~e~LN~~G~l~v-~k~P~~LrvrVVdGstLtaAvVln~IP~-----~- 199 (376)
++-+++-+-+-+|+.-|++.|+.|..||..-- .=++=...+ .+.|.---+|+-.|||+||=++..++=+ |
T Consensus 87 s~pkaatrrvl~a~~~a~~~Ga~V~gLGgFss---IVgn~~~n~q~~~~e~t~~~~ttgns~Tayaa~r~Vl~~~~~lGi 163 (351)
T COG5322 87 SRPKAATRRVLNAMALAQKLGADVTGLGGFSS---IVGNLGQNVQVRNVELTFTRFTTGNSHTAYAACRQVLKHFAQLGI 163 (351)
T ss_pred hCHHHHHHHHHHHHHHHHHcCCeEEeecchhh---hhccccccccccceEEEEEecccCCccchHHHHHHHHHHHHHhCc
Confidence 34667777777888999999999999986522 000001111 2445223468889999999998877733 1
Q ss_pred ---CceEEEeccCCchhHHHHHHHHHhcCCcEEEeechhHHHHHhhc----CchhhccceeeecccccC--cceEEEEcC
Q 017172 200 ---TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLR----IPVEAQHNLVLSTSYAAH--KTKIWLVGD 270 (376)
Q Consensus 200 ---t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~~~~l~~~----~p~~~~~~Lv~~t~y~a~--~~K~WlVG~ 270 (376)
-.+|=.+|+++ -||.+||..|.-++-+..|+-++ -+...++ .+++.-.-.+-+++|... ..-+|+-
T Consensus 164 dlsqatvaivGa~G--~Ia~~Iar~la~~~~~~~ll~r~-aea~~rq~l~~l~e~~~~~~i~s~d~~~~~e~i~v~vA-- 238 (351)
T COG5322 164 DLSQATVAIVGATG--DIASAIARWLAPKVGVKELLLRD-AEARNRQRLTLLQEELGRGKIMSLDYALPQEDILVWVA-- 238 (351)
T ss_pred CHHHCeEEEecCCc--hHHHHHHHHhccccCEEEEeccc-HHhhhhhhhhhcccccCCCeeeeccccccccceEEEEe--
Confidence 23789999997 89999999999774444442311 1111222 233332223345566543 2355775
Q ss_pred CCCHHHhhcCCCCceeeecccCCCcC-----cc-CCc-c-------ccccCcccC-CCC-C-Cccchhhhhcccccchhh
Q 017172 271 DLTGKEQARAPKGTIFIPYTQIPPRK-----LR-KDC-F-------YHSTPAMII-PPS-L-SNMHSCENWLGRRVMSAW 333 (376)
Q Consensus 271 ~l~~~eQ~~Ap~Gt~FipfsqfPp~~-----~R-~DC-t-------Y~~tpAM~~-P~~-~-~~l~sCE~~lpR~vmsAc 333 (376)
--|+|..--|+. +-|.. -| ||- + .+-.|.=.+ |.. + -|+.+- ..||-|.|-||
T Consensus 239 --------s~~~g~~I~pq~-lkpg~~ivD~g~P~dvd~~vk~~~~V~Ii~GGlV~~s~~it~gi~~~-~~~p~~~l~aC 308 (351)
T COG5322 239 --------SMPKGVEIFPQH-LKPGCLIVDGGYPKDVDTSVKNVGGVRIIPGGLVEHSLDITWGIMKI-VGMPVRQLFAC 308 (351)
T ss_pred --------ecCCCceechhh-ccCCeEEEcCCcCcccccccccCCCeEEecCccccCccccchhHHHH-cccchhhHHHH
Confidence 246665555554 22220 11 221 1 111121111 111 1 123333 45699999999
Q ss_pred hhcceeecccCCCCc-ccCC-cc-cchHHHHHHHHHcCCccC
Q 017172 334 RIAGIIHALEGWDLN-ECGQ-TM-CDIHQVWHASLRHGFRPL 372 (376)
Q Consensus 334 hagGivHaLEgW~~h-E~G~-id-~~id~vW~AAl~hGF~p~ 372 (376)
-|--++=.+|||-.+ --|. |- +.|+.+=++|-+|||+|+
T Consensus 309 lAEtlil~~eg~~~~fS~Grq~~~dk~~~ig~~aekhGF~p~ 350 (351)
T COG5322 309 LAETLILEFEGEHTNFSWGRQILVDKMEFIGDAAEKHGFKPL 350 (351)
T ss_pred HHHHHHHHhcchhhhccccccccHHHHHHHHHHHHHcCCCCC
Confidence 999999999999544 5676 76 999999999999999996
No 5
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.71 E-value=0.0094 Score=53.21 Aligned_cols=50 Identities=24% Similarity=0.314 Sum_probs=41.5
Q ss_pred cCCceehhhhhhcCCcC---------CceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 183 DGSSLAAAVVVNSLPKT---------TAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 183 dGstLtaAvVln~IP~~---------t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
.||++|||+.+.-+.+- -+.|++.|+++ .+|+++|..|+++|.+|.+.++
T Consensus 2 ~G~~~ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG--~iG~~~a~~l~~~g~~V~l~~R 60 (194)
T cd01078 2 NGSNTTAAAAVAAAGKALELMGKDLKGKTAVVLGGTG--PVGQRAAVLLAREGARVVLVGR 60 (194)
T ss_pred CCcHHHHHHHHHHHHHHHHHhCcCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcC
Confidence 59999999887766532 25899999986 9999999999999999998543
No 6
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=95.59 E-value=0.021 Score=49.03 Aligned_cols=66 Identities=20% Similarity=0.224 Sum_probs=47.6
Q ss_pred EEEeccCCchhHHHHHHHHHhcCCcEEEeechhHHHHHhhcCchhhccceeeecccccCcceE-EEEcCCCCHHHhhcCC
Q 017172 203 VLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKI-WLVGDDLTGKEQARAP 281 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~~~~l~~~~p~~~~~~Lv~~t~y~a~~~K~-WlVG~~l~~~eQ~~Ap 281 (376)
|+++|+++ ++|++++..|.++|.+|..+.+..- +.+. ..++ ++.||..+++.=..|.
T Consensus 1 I~V~GatG--~vG~~l~~~L~~~~~~V~~~~R~~~-------------------~~~~-~~~~~~~~~d~~d~~~~~~al 58 (183)
T PF13460_consen 1 ILVFGATG--FVGRALAKQLLRRGHEVTALVRSPS-------------------KAED-SPGVEIIQGDLFDPDSVKAAL 58 (183)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTSEEEEEESSGG-------------------GHHH-CTTEEEEESCTTCHHHHHHHH
T ss_pred eEEECCCC--hHHHHHHHHHHHCCCEEEEEecCch-------------------hccc-ccccccceeeehhhhhhhhhh
Confidence 78999997 9999999999999999999542210 1100 1234 8899998887777777
Q ss_pred CCceeeecc
Q 017172 282 KGTIFIPYT 290 (376)
Q Consensus 282 ~Gt~Fipfs 290 (376)
+|...+=+.
T Consensus 59 ~~~d~vi~~ 67 (183)
T PF13460_consen 59 KGADAVIHA 67 (183)
T ss_dssp TTSSEEEEC
T ss_pred hhcchhhhh
Confidence 776655444
No 7
>CHL00194 ycf39 Ycf39; Provisional
Probab=94.53 E-value=0.1 Score=49.56 Aligned_cols=63 Identities=16% Similarity=0.193 Sum_probs=43.3
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeechhHHHHHhhcCchhhccceeeecccccCcceEEEEcCCCCHHHhhcCC
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAP 281 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~~~~l~~~~p~~~~~~Lv~~t~y~a~~~K~WlVG~~l~~~eQ~~Ap 281 (376)
.|++||++| .+|+.++.+|.++|.+|..+++.. +.. ..+. .. . -.|+.||..++..-..|-
T Consensus 2 kIlVtGatG--~iG~~lv~~Ll~~g~~V~~l~R~~-~~~---------~~l~---~~---~-v~~v~~Dl~d~~~l~~al 62 (317)
T CHL00194 2 SLLVIGATG--TLGRQIVRQALDEGYQVRCLVRNL-RKA---------SFLK---EW---G-AELVYGDLSLPETLPPSF 62 (317)
T ss_pred EEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcCh-HHh---------hhHh---hc---C-CEEEECCCCCHHHHHHHH
Confidence 589999997 999999999999999998854321 000 0000 00 1 137889988877666666
Q ss_pred CC
Q 017172 282 KG 283 (376)
Q Consensus 282 ~G 283 (376)
+|
T Consensus 63 ~g 64 (317)
T CHL00194 63 KG 64 (317)
T ss_pred CC
Confidence 66
No 8
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=92.18 E-value=0.3 Score=52.62 Aligned_cols=60 Identities=20% Similarity=0.454 Sum_probs=46.8
Q ss_pred eccCCCccEEEEc------CCceehhhhhhcCCc-----CCceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 171 ERQPNKLKIKVVD------GSSLAAAVVVNSLPK-----TTAHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 171 ~k~P~~LrvrVVd------GstLtaAvVln~IP~-----~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+|||+.-+.|..| |.+...+.+..-+|+ +-+-||++|+++ .+|++++..|+++|.+|..+
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gKvVLVTGATG--gIG~aLAr~LLk~G~~Vval 110 (576)
T PLN03209 40 SKHPHSRKLRSLDIKAQASGATKFSSAAIEAIPKELDTKDEDLAFVAGATG--KVGSRTVRELLKLGFRVRAG 110 (576)
T ss_pred ccCcccccccccchhhccccchhhhhhhhhccccccccCCCCEEEEECCCC--HHHHHHHHHHHHCCCeEEEE
Confidence 5777666666655 455556777778885 334799999996 99999999999999999873
No 9
>PRK06482 short chain dehydrogenase; Provisional
Probab=92.15 E-value=0.29 Score=44.90 Aligned_cols=31 Identities=16% Similarity=0.269 Sum_probs=27.9
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
++.||+||+++ -||+++|..|.++|.+|...
T Consensus 2 ~k~vlVtGasg--~IG~~la~~L~~~g~~v~~~ 32 (276)
T PRK06482 2 SKTWFITGASS--GFGRGMTERLLARGDRVAAT 32 (276)
T ss_pred CCEEEEecCCC--HHHHHHHHHHHHCCCEEEEE
Confidence 36799999995 99999999999999999884
No 10
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=91.70 E-value=0.31 Score=43.59 Aligned_cols=34 Identities=18% Similarity=0.308 Sum_probs=29.5
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeechh
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD 235 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~ 235 (376)
-+.|++||+++ =||+++|..|+++|.+|++..+.
T Consensus 5 ~k~vlItGas~--gIG~~ia~~l~~~G~~vi~~~r~ 38 (248)
T TIGR01832 5 GKVALVTGANT--GLGQGIAVGLAEAGADIVGAGRS 38 (248)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCc
Confidence 36799999995 89999999999999999985543
No 11
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=91.56 E-value=0.28 Score=47.88 Aligned_cols=44 Identities=25% Similarity=0.319 Sum_probs=38.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe--echhHHHHHhhcCch
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 246 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m--~s~~~~~~l~~~~p~ 246 (376)
|=|++||++ |=+|.|+|..|++.|.+|++ =+.|+-+.|+.+.++
T Consensus 7 kv~lITGAS--SGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~ 52 (246)
T COG4221 7 KVALITGAS--SGIGEATARALAEAGAKVVLAARREERLEALADEIGA 52 (246)
T ss_pred cEEEEecCc--chHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc
Confidence 568999999 58999999999999999999 467788899888765
No 12
>PRK06924 short chain dehydrogenase; Provisional
Probab=91.39 E-value=0.26 Score=44.21 Aligned_cols=31 Identities=29% Similarity=0.461 Sum_probs=28.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ =+|++||..|+++|.+|++++
T Consensus 2 k~vlItGasg--giG~~ia~~l~~~g~~V~~~~ 32 (251)
T PRK06924 2 RYVIITGTSQ--GLGEAIANQLLEKGTHVISIS 32 (251)
T ss_pred cEEEEecCCc--hHHHHHHHHHHhcCCEEEEEe
Confidence 5799999995 999999999999999999854
No 13
>PRK06841 short chain dehydrogenase; Provisional
Probab=90.91 E-value=0.32 Score=43.68 Aligned_cols=34 Identities=18% Similarity=0.330 Sum_probs=29.6
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeechh
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD 235 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~ 235 (376)
-+.|++||+++ -+|+++|..|+++|.+|++++++
T Consensus 15 ~k~vlItGas~--~IG~~la~~l~~~G~~Vi~~~r~ 48 (255)
T PRK06841 15 GKVAVVTGGAS--GIGHAIAELFAAKGARVALLDRS 48 (255)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCC
Confidence 35799999995 99999999999999999986543
No 14
>PRK07577 short chain dehydrogenase; Provisional
Probab=90.88 E-value=0.32 Score=43.05 Aligned_cols=32 Identities=25% Similarity=0.423 Sum_probs=28.5
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+.|++||+++ -||+++|..|+++|.+|+++.+
T Consensus 4 k~vlItG~s~--~iG~~ia~~l~~~G~~v~~~~r 35 (234)
T PRK07577 4 RTVLVTGATK--GIGLALSLRLANLGHQVIGIAR 35 (234)
T ss_pred CEEEEECCCC--cHHHHHHHHHHHCCCEEEEEeC
Confidence 5799999995 9999999999999999998543
No 15
>PRK08264 short chain dehydrogenase; Validated
Probab=90.83 E-value=0.3 Score=43.42 Aligned_cols=32 Identities=25% Similarity=0.324 Sum_probs=28.1
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCc-EEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGI-KVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv-~V~m~s~ 234 (376)
+.|++||+++ .||+++|..|+++|. +|++..+
T Consensus 7 ~~vlItGgsg--~iG~~la~~l~~~G~~~V~~~~r 39 (238)
T PRK08264 7 KVVLVTGANR--GIGRAFVEQLLARGAAKVYAAAR 39 (238)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCcccEEEEec
Confidence 5699999995 999999999999999 9888543
No 16
>PRK05867 short chain dehydrogenase; Provisional
Probab=90.56 E-value=0.53 Score=42.60 Aligned_cols=33 Identities=24% Similarity=0.354 Sum_probs=28.8
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
.-+-|++||+++ =+|+++|..|.++|.+|++.+
T Consensus 8 ~~k~vlVtGas~--gIG~~ia~~l~~~G~~V~~~~ 40 (253)
T PRK05867 8 HGKRALITGAST--GIGKRVALAYVEAGAQVAIAA 40 (253)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEc
Confidence 346799999994 899999999999999999843
No 17
>PRK08265 short chain dehydrogenase; Provisional
Probab=90.56 E-value=0.47 Score=43.47 Aligned_cols=32 Identities=28% Similarity=0.367 Sum_probs=28.5
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+-|++||+++ -+|++||..|+++|.+|++.++
T Consensus 7 k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r 38 (261)
T PRK08265 7 KVAIVTGGAT--LIGAAVARALVAAGARVAIVDI 38 (261)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeC
Confidence 6799999995 9999999999999999998543
No 18
>PRK06196 oxidoreductase; Provisional
Probab=90.48 E-value=0.63 Score=44.15 Aligned_cols=43 Identities=16% Similarity=0.190 Sum_probs=34.4
Q ss_pred hhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 189 AAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 189 aAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.-++|.++-.-+-|++||+++ -+|+++|..|.++|.+|++..
T Consensus 15 ~~~~~~~~~l~~k~vlITGasg--gIG~~~a~~L~~~G~~Vv~~~ 57 (315)
T PRK06196 15 AEEVLAGHDLSGKTAIVTGGYS--GLGLETTRALAQAGAHVIVPA 57 (315)
T ss_pred HHHHhcCCCCCCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEe
Confidence 4445566554447899999995 899999999999999999843
No 19
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=90.47 E-value=0.44 Score=41.78 Aligned_cols=29 Identities=24% Similarity=0.374 Sum_probs=26.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.|++||+++ .+|+++|..|.++|.+|++
T Consensus 7 ~~vlItGasg--~iG~~l~~~l~~~g~~v~~ 35 (249)
T PRK12825 7 RVALVTGAAR--GLGRAIALRLARAGADVVV 35 (249)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCeEEE
Confidence 5799999995 9999999999999999877
No 20
>PRK09186 flagellin modification protein A; Provisional
Probab=90.19 E-value=0.54 Score=42.16 Aligned_cols=31 Identities=16% Similarity=0.230 Sum_probs=28.2
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ -+|+++|..|+++|.+|++++
T Consensus 5 k~vlItGas~--giG~~~a~~l~~~g~~v~~~~ 35 (256)
T PRK09186 5 KTILITGAGG--LIGSALVKAILEAGGIVIAAD 35 (256)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCEEEEEe
Confidence 6799999995 899999999999999999943
No 21
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=90.14 E-value=0.31 Score=45.09 Aligned_cols=29 Identities=24% Similarity=0.303 Sum_probs=26.6
Q ss_pred EEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 203 VLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
|++||+++ +||++++.+|.++|.+|...+
T Consensus 2 ilVtGatG--~iG~~vv~~L~~~g~~V~~~~ 30 (285)
T TIGR03649 2 ILLTGGTG--KTASRIARLLQAASVPFLVAS 30 (285)
T ss_pred EEEEcCCC--hHHHHHHHHHHhCCCcEEEEe
Confidence 79999997 999999999999999998844
No 22
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=90.03 E-value=0.41 Score=42.44 Aligned_cols=32 Identities=22% Similarity=0.297 Sum_probs=28.3
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+.|++||+++ -+|+++|.+|+++|.+|+++++
T Consensus 7 ~~ilItGasg--~iG~~l~~~l~~~g~~V~~~~r 38 (251)
T PRK12826 7 RVALVTGAAR--GIGRAIAVRLAADGAEVIVVDI 38 (251)
T ss_pred CEEEEcCCCC--cHHHHHHHHHHHCCCEEEEEeC
Confidence 4689999995 9999999999999999988543
No 23
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=90.02 E-value=0.64 Score=40.87 Aligned_cols=29 Identities=24% Similarity=0.378 Sum_probs=26.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.|++||+++ .+|+++|..|+++|.+|++
T Consensus 6 ~~vlItG~sg--~iG~~l~~~l~~~G~~v~~ 34 (248)
T PRK05557 6 KVALVTGASR--GIGRAIAERLAAQGANVVI 34 (248)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCEEEE
Confidence 5799999995 9999999999999999966
No 24
>PRK06179 short chain dehydrogenase; Provisional
Probab=89.99 E-value=0.43 Score=43.52 Aligned_cols=32 Identities=22% Similarity=0.366 Sum_probs=28.3
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+-|++||+++ -||++||..|+++|.+|+...+
T Consensus 5 ~~vlVtGasg--~iG~~~a~~l~~~g~~V~~~~r 36 (270)
T PRK06179 5 KVALVTGASS--GIGRATAEKLARAGYRVFGTSR 36 (270)
T ss_pred CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeC
Confidence 4699999995 9999999999999999998543
No 25
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=89.84 E-value=0.58 Score=41.71 Aligned_cols=31 Identities=23% Similarity=0.301 Sum_probs=27.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+-||+||+++ -||+++|..|+++|.+|++.+
T Consensus 2 ~~vlItGa~g--~lG~~l~~~l~~~g~~v~~~~ 32 (255)
T TIGR01963 2 KTALVTGAAS--GIGLAIALALAAAGANVVVND 32 (255)
T ss_pred CEEEEcCCcc--hHHHHHHHHHHHCCCEEEEEe
Confidence 4589999995 899999999999999999843
No 26
>PRK08177 short chain dehydrogenase; Provisional
Probab=89.83 E-value=0.44 Score=42.49 Aligned_cols=31 Identities=16% Similarity=0.252 Sum_probs=28.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ .+|+++|..|+++|.+|+.++
T Consensus 2 k~vlItG~sg--~iG~~la~~l~~~G~~V~~~~ 32 (225)
T PRK08177 2 RTALIIGASR--GLGLGLVDRLLERGWQVTATV 32 (225)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHhCCCEEEEEe
Confidence 5699999995 999999999999999999844
No 27
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=89.80 E-value=0.61 Score=41.62 Aligned_cols=30 Identities=23% Similarity=0.348 Sum_probs=27.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+.|++||+++ .+|+++|..|.++|.+|+++
T Consensus 5 ~~vlItG~sg--~iG~~la~~l~~~g~~v~~~ 34 (258)
T PRK12429 5 KVALVTGAAS--GIGLEIALALAKEGAKVVIA 34 (258)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCeEEEE
Confidence 5799999995 99999999999999999884
No 28
>PRK06949 short chain dehydrogenase; Provisional
Probab=89.80 E-value=0.77 Score=41.25 Aligned_cols=43 Identities=21% Similarity=0.258 Sum_probs=33.3
Q ss_pred cCCceEEEeccCCchhHHHHHHHHHhcCCcEEEee--chhHHHHHhh
Q 017172 198 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKL 242 (376)
Q Consensus 198 ~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~--s~~~~~~l~~ 242 (376)
..-+.|++||+++ =||+++|..|+++|.+|+.. +.++.+.+..
T Consensus 7 ~~~k~ilItGasg--~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~ 51 (258)
T PRK06949 7 LEGKVALVTGASS--GLGARFAQVLAQAGAKVVLASRRVERLKELRA 51 (258)
T ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 3447899999995 89999999999999999984 3344444443
No 29
>PRK07890 short chain dehydrogenase; Provisional
Probab=89.60 E-value=0.62 Score=41.84 Aligned_cols=31 Identities=16% Similarity=0.230 Sum_probs=28.1
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.||+||+++ =||+++|..|+++|.+|++.+
T Consensus 6 k~vlItGa~~--~IG~~la~~l~~~G~~V~~~~ 36 (258)
T PRK07890 6 KVVVVSGVGP--GLGRTLAVRAARAGADVVLAA 36 (258)
T ss_pred CEEEEECCCC--cHHHHHHHHHHHcCCEEEEEe
Confidence 5699999995 899999999999999999854
No 30
>PRK09135 pteridine reductase; Provisional
Probab=89.55 E-value=0.74 Score=40.75 Aligned_cols=32 Identities=25% Similarity=0.401 Sum_probs=28.6
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
.+.|++||+++ =||+++|..|+++|.+|+++.
T Consensus 6 ~~~vlItGa~g--~iG~~l~~~l~~~g~~v~~~~ 37 (249)
T PRK09135 6 AKVALITGGAR--RIGAAIARTLHAAGYRVAIHY 37 (249)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEc
Confidence 36799999995 999999999999999999843
No 31
>PRK05993 short chain dehydrogenase; Provisional
Probab=89.45 E-value=0.67 Score=42.98 Aligned_cols=31 Identities=23% Similarity=0.407 Sum_probs=27.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+-|++||+++ -+|+++|..|+++|.+|++.+
T Consensus 5 k~vlItGasg--giG~~la~~l~~~G~~Vi~~~ 35 (277)
T PRK05993 5 RSILITGCSS--GIGAYCARALQSDGWRVFATC 35 (277)
T ss_pred CEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEE
Confidence 5799999995 999999999999999999843
No 32
>PRK06182 short chain dehydrogenase; Validated
Probab=89.45 E-value=0.5 Score=43.39 Aligned_cols=31 Identities=23% Similarity=0.300 Sum_probs=28.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ .+|+++|..|+++|.+|+...
T Consensus 4 k~vlItGasg--giG~~la~~l~~~G~~V~~~~ 34 (273)
T PRK06182 4 KVALVTGASS--GIGKATARRLAAQGYTVYGAA 34 (273)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEe
Confidence 5799999995 999999999999999999843
No 33
>PRK07063 short chain dehydrogenase; Provisional
Probab=89.30 E-value=0.69 Score=41.94 Aligned_cols=41 Identities=20% Similarity=0.209 Sum_probs=31.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec--hhHHHHHhhc
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKLR 243 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s--~~~~~~l~~~ 243 (376)
+.|++||+++ =+|+++|..|+++|.+|++++ +++.+.+..+
T Consensus 8 k~vlVtGas~--gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~ 50 (260)
T PRK07063 8 KVALVTGAAQ--GIGAAIARAFAREGAAVALADLDAALAERAAAA 50 (260)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 5799999995 899999999999999998843 3344444333
No 34
>PRK12829 short chain dehydrogenase; Provisional
Probab=89.29 E-value=0.87 Score=40.93 Aligned_cols=32 Identities=22% Similarity=0.377 Sum_probs=28.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+.|++||+++ -+|+++|..|+++|.+|+++.+
T Consensus 12 ~~vlItGa~g--~iG~~~a~~L~~~g~~V~~~~r 43 (264)
T PRK12829 12 LRVLVTGGAS--GIGRAIAEAFAEAGARVHVCDV 43 (264)
T ss_pred CEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeC
Confidence 6899999995 9999999999999999988543
No 35
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=89.29 E-value=0.55 Score=41.27 Aligned_cols=32 Identities=25% Similarity=0.301 Sum_probs=28.3
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+.|++||+++ .+|+++|..|.++|.+|+++++
T Consensus 6 ~~ilItGasg--~iG~~l~~~l~~~g~~v~~~~r 37 (246)
T PRK05653 6 KTALVTGASR--GIGRAIALRLAADGAKVVIYDS 37 (246)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeC
Confidence 5699999995 9999999999999999988543
No 36
>PRK06197 short chain dehydrogenase; Provisional
Probab=89.20 E-value=0.57 Score=44.07 Aligned_cols=37 Identities=19% Similarity=0.319 Sum_probs=30.6
Q ss_pred cCCc-CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 195 SLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 195 ~IP~-~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
.+|. .-+-|++||+++ -||+++|..|+++|.+|++.+
T Consensus 10 ~~~~~~~k~vlItGas~--gIG~~~a~~l~~~G~~vi~~~ 47 (306)
T PRK06197 10 DIPDQSGRVAVVTGANT--GLGYETAAALAAKGAHVVLAV 47 (306)
T ss_pred ccccCCCCEEEEcCCCC--cHHHHHHHHHHHCCCEEEEEe
Confidence 3454 347899999995 899999999999999998844
No 37
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=89.12 E-value=0.52 Score=42.12 Aligned_cols=29 Identities=24% Similarity=0.406 Sum_probs=26.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.|++||+++ .+|+++|.+|+++|.+|++
T Consensus 5 ~~vlItGa~g--~iG~~~a~~l~~~g~~v~~ 33 (250)
T PRK08063 5 KVALVTGSSR--GIGKAIALRLAEEGYDIAV 33 (250)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 5799999995 9999999999999999876
No 38
>PRK07326 short chain dehydrogenase; Provisional
Probab=89.09 E-value=0.69 Score=41.01 Aligned_cols=32 Identities=28% Similarity=0.363 Sum_probs=28.5
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+-|++||+++ .+|+++|.+|.++|.+|+++.+
T Consensus 7 ~~ilItGatg--~iG~~la~~l~~~g~~V~~~~r 38 (237)
T PRK07326 7 KVALITGGSK--GIGFAIAEALLAEGYKVAITAR 38 (237)
T ss_pred CEEEEECCCC--cHHHHHHHHHHHCCCEEEEeeC
Confidence 5799999995 9999999999999999998553
No 39
>PRK09291 short chain dehydrogenase; Provisional
Probab=89.04 E-value=0.58 Score=41.98 Aligned_cols=31 Identities=23% Similarity=0.283 Sum_probs=27.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ -+|+++|..|+++|.+|+.+.
T Consensus 3 ~~vlVtGasg--~iG~~ia~~l~~~G~~v~~~~ 33 (257)
T PRK09291 3 KTILITGAGS--GFGREVALRLARKGHNVIAGV 33 (257)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEe
Confidence 4689999996 999999999999999998843
No 40
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=89.03 E-value=0.89 Score=41.09 Aligned_cols=33 Identities=24% Similarity=0.332 Sum_probs=29.1
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
-+.|++||+++ -+|+++|..|+++|.+|++.++
T Consensus 10 ~k~vlItGa~g--~iG~~ia~~l~~~G~~V~~~~r 42 (255)
T PRK07523 10 GRRALVTGSSQ--GIGYALAEGLAQAGAEVILNGR 42 (255)
T ss_pred CCEEEEECCcc--hHHHHHHHHHHHcCCEEEEEeC
Confidence 36799999995 8999999999999999998543
No 41
>PRK12742 oxidoreductase; Provisional
Probab=89.00 E-value=0.83 Score=40.49 Aligned_cols=31 Identities=19% Similarity=0.253 Sum_probs=27.7
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
-+.|++||+++ -||+++|..|.++|.+|++.
T Consensus 6 ~k~vlItGasg--gIG~~~a~~l~~~G~~v~~~ 36 (237)
T PRK12742 6 GKKVLVLGGSR--GIGAAIVRRFVTDGANVRFT 36 (237)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEe
Confidence 36899999995 89999999999999999873
No 42
>PRK07478 short chain dehydrogenase; Provisional
Probab=88.92 E-value=0.76 Score=41.53 Aligned_cols=31 Identities=19% Similarity=0.292 Sum_probs=27.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+-|++||+++ -+|+++|..|+++|.+|++.+
T Consensus 7 k~~lItGas~--giG~~ia~~l~~~G~~v~~~~ 37 (254)
T PRK07478 7 KVAIITGASS--GIGRAAAKLFAREGAKVVVGA 37 (254)
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEe
Confidence 5689999995 899999999999999999843
No 43
>PRK07856 short chain dehydrogenase; Provisional
Probab=88.62 E-value=0.61 Score=42.18 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=29.1
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
-+.+++||+++ -||+++|..|+++|.+|++++.
T Consensus 6 ~k~~lItGas~--gIG~~la~~l~~~g~~v~~~~r 38 (252)
T PRK07856 6 GRVVLVTGGTR--GIGAGIARAFLAAGATVVVCGR 38 (252)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeC
Confidence 46799999995 8999999999999999998543
No 44
>PRK07454 short chain dehydrogenase; Provisional
Probab=88.59 E-value=1 Score=40.20 Aligned_cols=32 Identities=19% Similarity=0.386 Sum_probs=28.7
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
-+-|++||+++ .+|+++|..|+++|.+|++++
T Consensus 6 ~k~vlItG~sg--~iG~~la~~l~~~G~~V~~~~ 37 (241)
T PRK07454 6 MPRALITGASS--GIGKATALAFAKAGWDLALVA 37 (241)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEe
Confidence 36799999995 999999999999999999854
No 45
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=88.58 E-value=0.74 Score=41.06 Aligned_cols=29 Identities=24% Similarity=0.331 Sum_probs=26.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.|++||+++ -||+++|..|+++|.+|++
T Consensus 7 ~~vlitGasg--~iG~~l~~~l~~~g~~v~~ 35 (252)
T PRK06077 7 KVVVVTGSGR--GIGRAIAVRLAKEGSLVVV 35 (252)
T ss_pred cEEEEeCCCC--hHHHHHHHHHHHCCCEEEE
Confidence 5799999995 9999999999999999876
No 46
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=88.57 E-value=0.72 Score=41.29 Aligned_cols=29 Identities=24% Similarity=0.274 Sum_probs=26.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.|++||+++ -||+++|..|+++|.+|++
T Consensus 3 k~ilItGas~--giG~~la~~l~~~g~~v~~ 31 (248)
T PRK06947 3 KVVLITGASR--GIGRATAVLAAARGWSVGI 31 (248)
T ss_pred cEEEEeCCCC--cHHHHHHHHHHHCCCEEEE
Confidence 5689999994 9999999999999999976
No 47
>PRK06523 short chain dehydrogenase; Provisional
Probab=88.55 E-value=0.58 Score=42.32 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=29.0
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
-+.|++||+++ -||+++|.+|+++|.+|+++++
T Consensus 9 ~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~r 41 (260)
T PRK06523 9 GKRALVTGGTK--GIGAATVARLLEAGARVVTTAR 41 (260)
T ss_pred CCEEEEECCCC--chhHHHHHHHHHCCCEEEEEeC
Confidence 36799999995 8999999999999999998543
No 48
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=88.50 E-value=0.84 Score=44.80 Aligned_cols=48 Identities=17% Similarity=0.301 Sum_probs=39.5
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEee--chhHHHHHhhcCchhh
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKLRIPVEA 248 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~--s~~~~~~l~~~~p~~~ 248 (376)
.-+-++.||++ |.+|+++|..|.+||..|+++ ++|+-+.|++++..+.
T Consensus 5 ~~~~~lITGAS--sGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~ 54 (265)
T COG0300 5 KGKTALITGAS--SGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT 54 (265)
T ss_pred CCcEEEEECCC--chHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh
Confidence 34578999999 599999999999999999994 6677888888755444
No 49
>PRK06398 aldose dehydrogenase; Validated
Probab=88.45 E-value=0.59 Score=42.86 Aligned_cols=31 Identities=19% Similarity=0.259 Sum_probs=28.1
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ -+|+++|..|+++|.+|++++
T Consensus 7 k~vlItGas~--gIG~~ia~~l~~~G~~Vi~~~ 37 (258)
T PRK06398 7 KVAIVTGGSQ--GIGKAVVNRLKEEGSNVINFD 37 (258)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCeEEEEe
Confidence 6799999994 899999999999999999854
No 50
>PRK05854 short chain dehydrogenase; Provisional
Probab=88.43 E-value=0.77 Score=43.92 Aligned_cols=30 Identities=17% Similarity=0.267 Sum_probs=27.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+-|++||++ +=||+++|..|+++|.+|++.
T Consensus 15 k~~lITGas--~GIG~~~a~~La~~G~~Vil~ 44 (313)
T PRK05854 15 KRAVVTGAS--DGLGLGLARRLAAAGAEVILP 44 (313)
T ss_pred CEEEEeCCC--ChHHHHHHHHHHHCCCEEEEE
Confidence 678999999 489999999999999999984
No 51
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=88.43 E-value=0.79 Score=41.89 Aligned_cols=31 Identities=16% Similarity=0.317 Sum_probs=28.1
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
|-|++||+++ =+|+++|..|+++|.+|++.+
T Consensus 9 k~~lItGas~--gIG~aia~~l~~~G~~vv~~~ 39 (251)
T PRK12481 9 KVAIITGCNT--GLGQGMAIGLAKAGADIVGVG 39 (251)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEec
Confidence 6799999994 899999999999999999854
No 52
>PRK07102 short chain dehydrogenase; Provisional
Probab=88.35 E-value=0.67 Score=41.59 Aligned_cols=32 Identities=19% Similarity=0.375 Sum_probs=28.2
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+.|++||+++ -||+++|.+|.++|.+|++.+.
T Consensus 2 ~~vlItGas~--giG~~~a~~l~~~G~~Vi~~~r 33 (243)
T PRK07102 2 KKILIIGATS--DIARACARRYAAAGARLYLAAR 33 (243)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHhcCCEEEEEeC
Confidence 4689999995 9999999999999999998543
No 53
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=88.33 E-value=0.89 Score=41.49 Aligned_cols=32 Identities=22% Similarity=0.357 Sum_probs=28.6
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
-+.|++||+++ -+|+++|..|.++|.+|++.+
T Consensus 5 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~ 36 (262)
T TIGR03325 5 GEVVLVTGGAS--GLGRAIVDRFVAEGARVAVLD 36 (262)
T ss_pred CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEe
Confidence 36899999995 899999999999999999843
No 54
>PRK07825 short chain dehydrogenase; Provisional
Probab=88.23 E-value=0.9 Score=41.61 Aligned_cols=31 Identities=26% Similarity=0.282 Sum_probs=27.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ -+|+++|..|.++|.+|++.+
T Consensus 6 ~~ilVtGasg--giG~~la~~l~~~G~~v~~~~ 36 (273)
T PRK07825 6 KVVAITGGAR--GIGLATARALAALGARVAIGD 36 (273)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEE
Confidence 5799999995 999999999999999998843
No 55
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=88.21 E-value=0.88 Score=41.44 Aligned_cols=30 Identities=23% Similarity=0.315 Sum_probs=27.2
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
.|++||+++ -+|++||..|+++|.+|++.+
T Consensus 2 ~vlItGas~--gIG~aia~~l~~~G~~V~~~~ 31 (259)
T PRK08340 2 NVLVTASSR--GIGFNVARELLKKGARVVISS 31 (259)
T ss_pred eEEEEcCCc--HHHHHHHHHHHHcCCEEEEEe
Confidence 589999994 899999999999999999854
No 56
>PRK08589 short chain dehydrogenase; Validated
Probab=88.06 E-value=0.8 Score=42.34 Aligned_cols=32 Identities=25% Similarity=0.279 Sum_probs=28.4
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+-|++||+++ =+|++||..|+++|.+|++.++
T Consensus 7 k~vlItGas~--gIG~aia~~l~~~G~~vi~~~r 38 (272)
T PRK08589 7 KVAVITGAST--GIGQASAIALAQEGAYVLAVDI 38 (272)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeC
Confidence 5789999994 8999999999999999999543
No 57
>PRK06180 short chain dehydrogenase; Provisional
Probab=88.03 E-value=0.94 Score=41.90 Aligned_cols=32 Identities=19% Similarity=0.239 Sum_probs=28.5
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
-+.|++||+++ -||+++|..|.++|.+|++..
T Consensus 4 ~~~vlVtGasg--giG~~la~~l~~~G~~V~~~~ 35 (277)
T PRK06180 4 MKTWLITGVSS--GFGRALAQAALAAGHRVVGTV 35 (277)
T ss_pred CCEEEEecCCC--hHHHHHHHHHHhCcCEEEEEe
Confidence 35699999995 999999999999999999954
No 58
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=87.96 E-value=1.2 Score=40.29 Aligned_cols=38 Identities=16% Similarity=0.220 Sum_probs=31.4
Q ss_pred cCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 195 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 195 ~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
++.-.-+.|++||+++ =+|+++|..|+++|.+|+++++
T Consensus 6 ~~~~~~k~ilItGas~--~IG~~la~~l~~~G~~v~~~~r 43 (256)
T PRK06124 6 RFSLAGQVALVTGSAR--GLGFEIARALAGAGAHVLVNGR 43 (256)
T ss_pred ccCCCCCEEEEECCCc--hHHHHHHHHHHHcCCeEEEEeC
Confidence 3444457899999995 8999999999999999999543
No 59
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=87.91 E-value=0.86 Score=42.40 Aligned_cols=28 Identities=25% Similarity=0.297 Sum_probs=24.9
Q ss_pred EEEeccCCchhHHHHHHHHHhcCC--cEEEee
Q 017172 203 VLLRGTVTANKVANAVASSLCQMG--IKVATI 232 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rg--v~V~m~ 232 (376)
||+||+++ -+|++++..|.++| .+|..+
T Consensus 2 vlvtGatG--~lG~~l~~~L~~~g~~~~V~~l 31 (367)
T TIGR01746 2 VLLTGATG--FLGAYLLEELLRRSTQAKVICL 31 (367)
T ss_pred EEEeccch--HHHHHHHHHHHhCCCCCEEEEE
Confidence 89999996 99999999999998 667763
No 60
>PRK05884 short chain dehydrogenase; Provisional
Probab=87.88 E-value=0.92 Score=41.02 Aligned_cols=30 Identities=27% Similarity=0.370 Sum_probs=26.9
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+|++||+++ -+|+++|..|+++|.+|++..
T Consensus 2 ~vlItGas~--giG~~ia~~l~~~g~~v~~~~ 31 (223)
T PRK05884 2 EVLVTGGDT--DLGRTIAEGFRNDGHKVTLVG 31 (223)
T ss_pred eEEEEeCCc--hHHHHHHHHHHHCCCEEEEEe
Confidence 589999995 899999999999999999843
No 61
>PRK06483 dihydromonapterin reductase; Provisional
Probab=87.85 E-value=0.9 Score=40.58 Aligned_cols=32 Identities=25% Similarity=0.311 Sum_probs=28.3
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+.|++||+++ =+|+++|..|+++|.+|++...
T Consensus 3 k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r 34 (236)
T PRK06483 3 APILITGAGQ--RIGLALAWHLLAQGQPVIVSYR 34 (236)
T ss_pred ceEEEECCCC--hHHHHHHHHHHHCCCeEEEEeC
Confidence 5789999995 8999999999999999998543
No 62
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=87.76 E-value=0.95 Score=40.09 Aligned_cols=32 Identities=22% Similarity=0.286 Sum_probs=28.1
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+-|++||+++ -||+++|..|+++|.+|++..+
T Consensus 3 k~vlItG~s~--~iG~~la~~l~~~g~~vi~~~r 34 (245)
T PRK12824 3 KIALVTGAKR--GIGSAIARELLNDGYRVIATYF 34 (245)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeC
Confidence 4689999994 9999999999999999999543
No 63
>PRK07062 short chain dehydrogenase; Provisional
Probab=87.73 E-value=0.94 Score=41.18 Aligned_cols=32 Identities=19% Similarity=0.183 Sum_probs=28.4
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
-+-+++||+++ -+|+++|..|.++|.+|++.+
T Consensus 8 ~k~~lItGas~--giG~~ia~~l~~~G~~V~~~~ 39 (265)
T PRK07062 8 GRVAVVTGGSS--GIGLATVELLLEAGASVAICG 39 (265)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEe
Confidence 46799999994 999999999999999999843
No 64
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=87.71 E-value=0.94 Score=45.03 Aligned_cols=55 Identities=20% Similarity=0.267 Sum_probs=40.6
Q ss_pred eehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEeechh--HHHHHhhc
Q 017172 187 LAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD--DYEKLKLR 243 (376)
Q Consensus 187 LtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~--~~~~l~~~ 243 (376)
..+-.+.+.++-.-+-+..||++ |-+|+++|..|++||.+|+|..++ +-+..+++
T Consensus 22 ~~~~~~~~~~~~~~~~~vVTGan--sGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~ 78 (314)
T KOG1208|consen 22 TTALEVTHGIDLSGKVALVTGAT--SGIGFETARELALRGAHVVLACRNEERGEEAKEQ 78 (314)
T ss_pred eecceeeccccCCCcEEEEECCC--CchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHH
Confidence 34445667776655788999999 599999999999999999994332 34444444
No 65
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=87.68 E-value=1 Score=40.01 Aligned_cols=32 Identities=13% Similarity=0.314 Sum_probs=28.3
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+.|++||+++ -+|+++|..|.++|.+|+++++
T Consensus 6 ~~vlItGasg--~iG~~l~~~l~~~G~~V~~~~r 37 (251)
T PRK07231 6 KVAIVTGASS--GIGEGIARRFAAEGARVVVTDR 37 (251)
T ss_pred cEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeC
Confidence 4689999995 8999999999999999998543
No 66
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=87.59 E-value=0.8 Score=41.38 Aligned_cols=33 Identities=15% Similarity=0.317 Sum_probs=29.0
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
.-+.|++||+++ -+|+++|..|+++|.+|++.+
T Consensus 8 ~~k~~lItGas~--giG~~ia~~L~~~G~~vvl~~ 40 (254)
T PRK08085 8 AGKNILITGSAQ--GIGFLLATGLAEYGAEIIIND 40 (254)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHcCCEEEEEc
Confidence 346799999995 999999999999999999944
No 67
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=87.41 E-value=0.81 Score=41.39 Aligned_cols=32 Identities=19% Similarity=0.303 Sum_probs=28.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+.|++||+++ =+|+++|..|+++|.+|++.++
T Consensus 9 k~vlVtGas~--gIG~~la~~l~~~G~~v~~~~r 40 (260)
T PRK12823 9 KVVVVTGAAQ--GIGRGVALRAAAEGARVVLVDR 40 (260)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeC
Confidence 6799999995 8999999999999999998554
No 68
>PRK12939 short chain dehydrogenase; Provisional
Probab=87.39 E-value=1.1 Score=39.74 Aligned_cols=32 Identities=25% Similarity=0.293 Sum_probs=28.5
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
-+.|++||+++ =+|+++|..|+++|.+|++++
T Consensus 7 ~~~vlItGa~g--~iG~~la~~l~~~G~~v~~~~ 38 (250)
T PRK12939 7 GKRALVTGAAR--GLGAAFAEALAEAGATVAFND 38 (250)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEe
Confidence 36799999995 899999999999999998854
No 69
>PRK07023 short chain dehydrogenase; Provisional
Probab=87.38 E-value=0.77 Score=41.19 Aligned_cols=31 Identities=26% Similarity=0.387 Sum_probs=27.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
..|++||+++ -||+++|..|+++|.+|+++.
T Consensus 2 ~~vlItGasg--giG~~ia~~l~~~G~~v~~~~ 32 (243)
T PRK07023 2 VRAIVTGHSR--GLGAALAEQLLQPGIAVLGVA 32 (243)
T ss_pred ceEEEecCCc--chHHHHHHHHHhCCCEEEEEe
Confidence 3689999995 899999999999999998854
No 70
>PLN00198 anthocyanidin reductase; Provisional
Probab=87.34 E-value=0.81 Score=43.56 Aligned_cols=33 Identities=24% Similarity=0.233 Sum_probs=29.3
Q ss_pred CcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 197 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 197 P~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
|-.-+.||+||+++ -||+++|.+|.++|.+|..
T Consensus 6 ~~~~~~vlItG~~G--fIG~~l~~~L~~~g~~V~~ 38 (338)
T PLN00198 6 PTGKKTACVIGGTG--FLASLLIKLLLQKGYAVNT 38 (338)
T ss_pred CCCCCeEEEECCch--HHHHHHHHHHHHCCCEEEE
Confidence 55567899999996 9999999999999999865
No 71
>PLN02780 ketoreductase/ oxidoreductase
Probab=87.24 E-value=0.97 Score=43.84 Aligned_cols=41 Identities=15% Similarity=0.340 Sum_probs=31.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec--hhHHHHHhhc
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKLR 243 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s--~~~~~~l~~~ 243 (376)
+-|++||++ +=+|+++|..|+++|.+|++.+ .+.-+.+..+
T Consensus 54 ~~~lITGAs--~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~ 96 (320)
T PLN02780 54 SWALVTGPT--DGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDS 96 (320)
T ss_pred CEEEEeCCC--cHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
Confidence 568999999 4899999999999999999843 3444444433
No 72
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=87.06 E-value=0.9 Score=41.62 Aligned_cols=31 Identities=19% Similarity=0.310 Sum_probs=28.0
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
.+.|++||+++ .+|++++..|.++|.+|..+
T Consensus 17 ~~~ilItGasG--~iG~~l~~~L~~~g~~V~~~ 47 (251)
T PLN00141 17 TKTVFVAGATG--RTGKRIVEQLLAKGFAVKAG 47 (251)
T ss_pred CCeEEEECCCc--HHHHHHHHHHHhCCCEEEEE
Confidence 46899999996 99999999999999999763
No 73
>PRK07774 short chain dehydrogenase; Provisional
Probab=87.04 E-value=0.91 Score=40.58 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=28.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+.|++||+++ =||+++|.+|.++|.+|+++++
T Consensus 7 k~vlItGasg--~iG~~la~~l~~~g~~vi~~~r 38 (250)
T PRK07774 7 KVAIVTGAAG--GIGQAYAEALAREGASVVVADI 38 (250)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeC
Confidence 6799999995 8999999999999999999544
No 74
>PRK06500 short chain dehydrogenase; Provisional
Probab=87.01 E-value=1.2 Score=39.61 Aligned_cols=31 Identities=19% Similarity=0.263 Sum_probs=28.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ -+|+++|..|.++|.+|++++
T Consensus 7 k~vlItGasg--~iG~~la~~l~~~g~~v~~~~ 37 (249)
T PRK06500 7 KTALITGGTS--GIGLETARQFLAEGARVAITG 37 (249)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEec
Confidence 5799999995 899999999999999998854
No 75
>PRK05717 oxidoreductase; Validated
Probab=87.00 E-value=1.4 Score=39.89 Aligned_cols=36 Identities=17% Similarity=0.139 Sum_probs=30.4
Q ss_pred CCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 196 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 196 IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
++..-+-|++||+++ -+|+++|..|.++|.+|++++
T Consensus 6 ~~~~~k~vlItG~sg--~IG~~~a~~l~~~g~~v~~~~ 41 (255)
T PRK05717 6 PGHNGRVALVTGAAR--GIGLGIAAWLIAEGWQVVLAD 41 (255)
T ss_pred cccCCCEEEEeCCcc--hHHHHHHHHHHHcCCEEEEEc
Confidence 333456799999995 999999999999999999853
No 76
>PRK08017 oxidoreductase; Provisional
Probab=86.97 E-value=1.2 Score=39.90 Aligned_cols=31 Identities=26% Similarity=0.423 Sum_probs=27.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ -+|+++|..|+++|.+|++..
T Consensus 3 k~vlVtGasg--~IG~~la~~l~~~g~~v~~~~ 33 (256)
T PRK08017 3 KSVLITGCSS--GIGLEAALELKRRGYRVLAAC 33 (256)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEe
Confidence 4699999985 899999999999999998843
No 77
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=86.96 E-value=1.2 Score=37.37 Aligned_cols=31 Identities=26% Similarity=0.394 Sum_probs=25.1
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCc-EEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGI-KVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv-~V~m~s 233 (376)
|-|++||+++ =||+++|..|+++|- +|++.+
T Consensus 1 k~~lItGa~~--giG~~~a~~l~~~g~~~v~~~~ 32 (167)
T PF00106_consen 1 KTVLITGASS--GIGRALARALARRGARVVILTS 32 (167)
T ss_dssp EEEEEETTTS--HHHHHHHHHHHHTTTEEEEEEE
T ss_pred CEEEEECCCC--HHHHHHHHHHHhcCceEEEEee
Confidence 4589999995 999999999999955 555544
No 78
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=86.92 E-value=0.72 Score=46.52 Aligned_cols=43 Identities=21% Similarity=0.374 Sum_probs=35.5
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec--hhHHHHHhhcCc
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKLRIP 245 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s--~~~~~~l~~~~p 245 (376)
+=...||++. ++|++.|.-||+||.+|+++| .+.-+.+++|+-
T Consensus 50 ~WAVVTGaTD--GIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~ 94 (312)
T KOG1014|consen 50 SWAVVTGATD--GIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIE 94 (312)
T ss_pred CEEEEECCCC--cchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 5678899995 999999999999999999954 456777777743
No 79
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=86.85 E-value=1.3 Score=40.40 Aligned_cols=39 Identities=15% Similarity=0.271 Sum_probs=31.0
Q ss_pred hhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 193 VNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 193 ln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+++..-.-+.+++||+++ -||+++|..|+++|.+|++.+
T Consensus 3 ~~~~~l~~k~~lItG~~~--gIG~a~a~~l~~~G~~vv~~~ 41 (253)
T PRK08993 3 LDAFSLEGKVAVVTGCDT--GLGQGMALGLAEAGCDIVGIN 41 (253)
T ss_pred ccccCCCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEec
Confidence 344433346899999995 899999999999999998743
No 80
>PRK07024 short chain dehydrogenase; Provisional
Probab=86.82 E-value=1.4 Score=40.16 Aligned_cols=31 Identities=16% Similarity=0.393 Sum_probs=27.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ =+|+++|..|.++|.+|+++.
T Consensus 3 ~~vlItGas~--gIG~~la~~l~~~G~~v~~~~ 33 (257)
T PRK07024 3 LKVFITGASS--GIGQALAREYARQGATLGLVA 33 (257)
T ss_pred CEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEe
Confidence 5699999995 899999999999999999854
No 81
>PRK12828 short chain dehydrogenase; Provisional
Probab=86.71 E-value=0.91 Score=39.81 Aligned_cols=32 Identities=28% Similarity=0.327 Sum_probs=28.5
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+-|++||+++ -||+++|..|+++|.+|+++++
T Consensus 8 k~vlItGatg--~iG~~la~~l~~~G~~v~~~~r 39 (239)
T PRK12828 8 KVVAITGGFG--GLGRATAAWLAARGARVALIGR 39 (239)
T ss_pred CEEEEECCCC--cHhHHHHHHHHHCCCeEEEEeC
Confidence 4699999995 9999999999999999988654
No 82
>PRK08643 acetoin reductase; Validated
Probab=86.59 E-value=1.3 Score=40.00 Aligned_cols=31 Identities=29% Similarity=0.356 Sum_probs=27.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
|-+++||+++ =+|++||.+|+++|.+|++++
T Consensus 3 k~~lItGas~--giG~~la~~l~~~G~~v~~~~ 33 (256)
T PRK08643 3 KVALVTGAGQ--GIGFAIAKRLVEDGFKVAIVD 33 (256)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEe
Confidence 5689999995 899999999999999998854
No 83
>PRK06101 short chain dehydrogenase; Provisional
Probab=86.57 E-value=1.3 Score=39.95 Aligned_cols=31 Identities=19% Similarity=0.341 Sum_probs=27.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ =+|+++|..|+++|.+|++.+
T Consensus 2 ~~vlItGas~--giG~~la~~L~~~G~~V~~~~ 32 (240)
T PRK06101 2 TAVLITGATS--GIGKQLALDYAKQGWQVIACG 32 (240)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHhCCCEEEEEE
Confidence 4589999995 899999999999999999854
No 84
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=86.35 E-value=1 Score=40.24 Aligned_cols=34 Identities=24% Similarity=0.268 Sum_probs=29.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeechhH
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD 236 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~ 236 (376)
+.|++||+++ =+|+++|..|+++|.+|++..++.
T Consensus 9 k~vlItGas~--~iG~~la~~l~~~G~~v~~~~~~~ 42 (252)
T PRK08220 9 KTVWVTGAAQ--GIGYAVALAFVEAGAKVIGFDQAF 42 (252)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEecch
Confidence 6799999995 899999999999999999955443
No 85
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=86.33 E-value=1.4 Score=39.08 Aligned_cols=31 Identities=23% Similarity=0.177 Sum_probs=28.1
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.||+||+++ .+|.++|..|.++|.+|+.+.
T Consensus 6 ~~vlItGa~g--~iG~~~a~~l~~~G~~V~~~~ 36 (238)
T PRK05786 6 KKVAIIGVSE--GLGYAVAYFALKEGAQVCINS 36 (238)
T ss_pred cEEEEECCCc--hHHHHHHHHHHHCCCEEEEEe
Confidence 5799999995 999999999999999999844
No 86
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=86.32 E-value=1.4 Score=39.99 Aligned_cols=31 Identities=19% Similarity=0.287 Sum_probs=27.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ -||+++|..|+++|.+|++..
T Consensus 13 k~ilItGa~g--~IG~~la~~l~~~G~~V~~~~ 43 (259)
T PRK08213 13 KTALVTGGSR--GLGLQIAEALGEAGARVVLSA 43 (259)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHcCCEEEEEe
Confidence 6799999995 899999999999999999843
No 87
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=86.29 E-value=1.1 Score=39.71 Aligned_cols=30 Identities=23% Similarity=0.347 Sum_probs=27.5
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+.++++|+++ -+|+++|..|+++|.+|++.
T Consensus 6 ~~ilI~Gasg--~iG~~la~~l~~~g~~v~~~ 35 (247)
T PRK05565 6 KVAIVTGASG--GIGRAIAELLAKEGAKVVIA 35 (247)
T ss_pred CEEEEeCCCc--HHHHHHHHHHHHCCCEEEEE
Confidence 5799999995 99999999999999999885
No 88
>PLN02253 xanthoxin dehydrogenase
Probab=86.26 E-value=1.6 Score=40.17 Aligned_cols=31 Identities=19% Similarity=0.323 Sum_probs=28.1
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ =+|+++|.+|+++|.+|++.+
T Consensus 19 k~~lItGas~--gIG~~la~~l~~~G~~v~~~~ 49 (280)
T PLN02253 19 KVALVTGGAT--GIGESIVRLFHKHGAKVCIVD 49 (280)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHcCCEEEEEe
Confidence 5799999995 899999999999999999854
No 89
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=86.19 E-value=0.98 Score=40.62 Aligned_cols=34 Identities=15% Similarity=0.257 Sum_probs=29.3
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
.-+-|++||+++ -||.++|..|.++|.+|+.+++
T Consensus 11 ~~k~vlItG~~g--~iG~~la~~l~~~G~~Vi~~~r 44 (247)
T PRK08945 11 KDRIILVTGAGD--GIGREAALTYARHGATVILLGR 44 (247)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCcEEEEeC
Confidence 345699999995 9999999999999999988544
No 90
>PRK05872 short chain dehydrogenase; Provisional
Probab=86.07 E-value=1.4 Score=41.62 Aligned_cols=43 Identities=19% Similarity=0.295 Sum_probs=33.3
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeec--hhHHHHHhhcC
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKLRI 244 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s--~~~~~~l~~~~ 244 (376)
-+-|++||+++ =||+++|..|.++|.+|++.. .++-+.+.++.
T Consensus 9 gk~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l 53 (296)
T PRK05872 9 GKVVVVTGAAR--GIGAELARRLHARGAKLALVDLEEAELAALAAEL 53 (296)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 36799999995 899999999999999999843 34444554443
No 91
>PRK06194 hypothetical protein; Provisional
Probab=86.02 E-value=1.4 Score=40.61 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=27.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ =+|+++|..|+++|.+|++.+
T Consensus 7 k~vlVtGasg--gIG~~la~~l~~~G~~V~~~~ 37 (287)
T PRK06194 7 KVAVITGAAS--GFGLAFARIGAALGMKLVLAD 37 (287)
T ss_pred CEEEEeCCcc--HHHHHHHHHHHHCCCEEEEEe
Confidence 5699999995 899999999999999999844
No 92
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=85.84 E-value=0.9 Score=42.40 Aligned_cols=30 Identities=23% Similarity=0.216 Sum_probs=27.4
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+.||+||+++ -||++++.+|.++|.+|..+
T Consensus 5 ~~ilVtGatG--fIG~~l~~~L~~~g~~V~~~ 34 (322)
T PLN02662 5 KVVCVTGASG--YIASWLVKLLLQRGYTVKAT 34 (322)
T ss_pred CEEEEECChH--HHHHHHHHHHHHCCCEEEEE
Confidence 6799999996 99999999999999999763
No 93
>PRK05866 short chain dehydrogenase; Provisional
Probab=85.53 E-value=1.5 Score=41.64 Aligned_cols=31 Identities=23% Similarity=0.468 Sum_probs=28.1
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ -||+++|..|+++|.+|++..
T Consensus 41 k~vlItGasg--gIG~~la~~La~~G~~Vi~~~ 71 (293)
T PRK05866 41 KRILLTGASS--GIGEAAAEQFARRGATVVAVA 71 (293)
T ss_pred CEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEE
Confidence 5799999994 999999999999999999854
No 94
>PRK08267 short chain dehydrogenase; Provisional
Probab=85.51 E-value=1.6 Score=39.60 Aligned_cols=31 Identities=16% Similarity=0.299 Sum_probs=27.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
|-|++||+++ =||+++|..|+++|.+|.+++
T Consensus 2 k~vlItGasg--~iG~~la~~l~~~G~~V~~~~ 32 (260)
T PRK08267 2 KSIFITGAAS--GIGRATALLFAAEGWRVGAYD 32 (260)
T ss_pred cEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEe
Confidence 4689999995 899999999999999999854
No 95
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=85.42 E-value=1.5 Score=41.97 Aligned_cols=84 Identities=20% Similarity=0.221 Sum_probs=57.2
Q ss_pred ccccccceeeeccCCCccEEEEcCCcee----hhhhhhcCCcCCceEEEeccCCchh--HHHHHHHHHhcCCcEEEe-ec
Q 017172 161 ELNRNGEIYLERQPNKLKIKVVDGSSLA----AAVVVNSLPKTTAHVLLRGTVTANK--VANAVASSLCQMGIKVAT-IC 233 (376)
Q Consensus 161 ~LN~~G~l~v~k~P~~LrvrVVdGstLt----aAvVln~IP~~t~eVfL~G~~~~sK--v~~AiA~~LC~rgv~V~m-~s 233 (376)
.++..+-+-.+|.-+...+...++.... ++.....++ .-+-++|.|..|.=| ++-||+..||++|++|+. .-
T Consensus 63 ~~~~~a~~p~~k~~~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~~nl~l~G~~G~GKThLa~Ai~~~l~~~g~sv~f~~~ 141 (254)
T COG1484 63 RRLRSASFPAKKTFEEFDFEFQPGIDKKALEDLASLVEFFE-RGENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFITA 141 (254)
T ss_pred HHHHHhcCCccCCcccccccCCcchhHHHHHHHHHHHHHhc-cCCcEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEEEH
Confidence 3444444444444445566666665544 334445777 667889999775335 999999999999999999 56
Q ss_pred hhHHHHHhhcCc
Q 017172 234 KDDYEKLKLRIP 245 (376)
Q Consensus 234 ~~~~~~l~~~~p 245 (376)
.|-...||..-.
T Consensus 142 ~el~~~Lk~~~~ 153 (254)
T COG1484 142 PDLLSKLKAAFD 153 (254)
T ss_pred HHHHHHHHHHHh
Confidence 777888887633
No 96
>PRK08339 short chain dehydrogenase; Provisional
Probab=85.41 E-value=1.4 Score=40.66 Aligned_cols=31 Identities=16% Similarity=0.214 Sum_probs=27.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
|-+++||+++ =+|++||..|.++|.+|++.+
T Consensus 9 k~~lItGas~--gIG~aia~~l~~~G~~V~~~~ 39 (263)
T PRK08339 9 KLAFTTASSK--GIGFGVARVLARAGADVILLS 39 (263)
T ss_pred CEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEe
Confidence 5789999994 899999999999999999843
No 97
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=85.35 E-value=1.6 Score=39.68 Aligned_cols=33 Identities=15% Similarity=0.232 Sum_probs=29.0
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
.-+.|++||+++ =+|++||..|+++|.+|++..
T Consensus 14 ~~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~ 46 (258)
T PRK06935 14 DGKVAIVTGGNT--GLGQGYAVALAKAGADIIITT 46 (258)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEe
Confidence 347899999995 899999999999999998843
No 98
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=85.34 E-value=1 Score=41.32 Aligned_cols=29 Identities=17% Similarity=0.269 Sum_probs=26.8
Q ss_pred EEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 203 VLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
||+||+++ -||++++..|.++|.+|..++
T Consensus 3 ILVtG~tG--fiG~~l~~~L~~~g~~V~~~~ 31 (314)
T COG0451 3 ILVTGGAG--FIGSHLVERLLAAGHDVRGLD 31 (314)
T ss_pred EEEEcCcc--cHHHHHHHHHHhCCCeEEEEe
Confidence 89999987 999999999999999999943
No 99
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=85.20 E-value=1.5 Score=39.42 Aligned_cols=31 Identities=19% Similarity=0.249 Sum_probs=27.5
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ =||+++|..|+++|.+|+.+.
T Consensus 3 k~vlItG~sg--~iG~~la~~L~~~g~~vi~~~ 33 (256)
T PRK12745 3 PVALVTGGRR--GIGLGIARALAAAGFDLAIND 33 (256)
T ss_pred cEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEe
Confidence 4689999995 799999999999999998843
No 100
>PRK08263 short chain dehydrogenase; Provisional
Probab=85.13 E-value=1.3 Score=40.90 Aligned_cols=31 Identities=13% Similarity=0.152 Sum_probs=27.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ -||+++|.+|.++|.+|++.+
T Consensus 4 k~vlItGasg--~iG~~~a~~l~~~g~~V~~~~ 34 (275)
T PRK08263 4 KVWFITGASR--GFGRAWTEAALERGDRVVATA 34 (275)
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEE
Confidence 5799999995 999999999999999998844
No 101
>PRK08251 short chain dehydrogenase; Provisional
Probab=85.09 E-value=1.8 Score=38.81 Aligned_cols=30 Identities=17% Similarity=0.341 Sum_probs=27.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+-|++||+++ -+|+++|..|+++|.+|++.
T Consensus 3 k~vlItGas~--giG~~la~~l~~~g~~v~~~ 32 (248)
T PRK08251 3 QKILITGASS--GLGAGMAREFAAKGRDLALC 32 (248)
T ss_pred CEEEEECCCC--HHHHHHHHHHHHcCCEEEEE
Confidence 4589999995 99999999999999999884
No 102
>PRK06914 short chain dehydrogenase; Provisional
Probab=84.89 E-value=1.7 Score=39.80 Aligned_cols=31 Identities=13% Similarity=0.149 Sum_probs=27.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ -+|+++|..|.++|.+|++..
T Consensus 4 k~~lItGasg--~iG~~la~~l~~~G~~V~~~~ 34 (280)
T PRK06914 4 KIAIVTGASS--GFGLLTTLELAKKGYLVIATM 34 (280)
T ss_pred CEEEEECCCc--hHHHHHHHHHHhCCCEEEEEe
Confidence 4689999995 999999999999999999843
No 103
>PRK06057 short chain dehydrogenase; Provisional
Probab=84.89 E-value=1.8 Score=39.30 Aligned_cols=30 Identities=20% Similarity=0.188 Sum_probs=27.5
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+.|++||+++ =||+++|.+|.++|.+|+++
T Consensus 8 ~~vlItGasg--gIG~~~a~~l~~~G~~v~~~ 37 (255)
T PRK06057 8 RVAVITGGGS--GIGLATARRLAAEGATVVVG 37 (255)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHcCCEEEEE
Confidence 5799999995 89999999999999999884
No 104
>PRK06953 short chain dehydrogenase; Provisional
Probab=84.86 E-value=1.7 Score=38.72 Aligned_cols=31 Identities=16% Similarity=0.235 Sum_probs=27.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ -||+++|..|+++|.+|++..
T Consensus 2 ~~vlvtG~sg--~iG~~la~~L~~~G~~v~~~~ 32 (222)
T PRK06953 2 KTVLIVGASR--GIGREFVRQYRADGWRVIATA 32 (222)
T ss_pred ceEEEEcCCC--chhHHHHHHHHhCCCEEEEEE
Confidence 4689999995 999999999999999998843
No 105
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=84.79 E-value=1.6 Score=39.73 Aligned_cols=31 Identities=23% Similarity=0.205 Sum_probs=27.9
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
-+.|++||+++ -+|++||..|+++|.+|++.
T Consensus 7 ~k~~lItGa~~--gIG~~ia~~l~~~G~~vvi~ 37 (261)
T PRK08936 7 GKVVVITGGST--GLGRAMAVRFGKEKAKVVIN 37 (261)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEE
Confidence 36799999995 89999999999999999883
No 106
>PRK08628 short chain dehydrogenase; Provisional
Probab=84.79 E-value=1.2 Score=40.25 Aligned_cols=32 Identities=16% Similarity=0.248 Sum_probs=28.2
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
-+.|++||+++ -+|+++|..|+++|.+|++..
T Consensus 7 ~~~ilItGasg--giG~~la~~l~~~G~~v~~~~ 38 (258)
T PRK08628 7 DKVVIVTGGAS--GIGAAISLRLAEEGAIPVIFG 38 (258)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHcCCcEEEEc
Confidence 35799999995 899999999999999998844
No 107
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=84.75 E-value=1.6 Score=38.71 Aligned_cols=30 Identities=20% Similarity=0.257 Sum_probs=27.1
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+.|++||+++ =||+++|..|+++|..|.+.
T Consensus 7 ~~vlItGa~g--~iG~~la~~l~~~g~~v~~~ 36 (245)
T PRK12936 7 RKALVTGASG--GIGEEIARLLHAQGAIVGLH 36 (245)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEE
Confidence 5799999995 89999999999999998873
No 108
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=84.73 E-value=1.2 Score=41.91 Aligned_cols=29 Identities=21% Similarity=0.197 Sum_probs=27.2
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.||+||+++ -||++++..|.++|.+|..
T Consensus 6 ~~vlVTGatG--~iG~~l~~~L~~~g~~V~~ 34 (322)
T PLN02986 6 KLVCVTGASG--YIASWIVKLLLLRGYTVKA 34 (322)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEE
Confidence 6899999996 9999999999999999986
No 109
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=84.68 E-value=1.8 Score=39.13 Aligned_cols=30 Identities=23% Similarity=0.330 Sum_probs=26.9
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
.|++||+++ =+|.++|..|+++|.+|++++
T Consensus 2 ~vlItGasg--~iG~~la~~l~~~G~~V~~~~ 31 (248)
T PRK10538 2 IVLVTGATA--GFGECITRRFIQQGHKVIATG 31 (248)
T ss_pred EEEEECCCc--hHHHHHHHHHHHCCCEEEEEE
Confidence 489999995 899999999999999999843
No 110
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=84.67 E-value=1.8 Score=39.08 Aligned_cols=31 Identities=16% Similarity=0.198 Sum_probs=27.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ -||+++|..|.++|.+|++++
T Consensus 3 k~ilItG~~~--~IG~~la~~l~~~g~~vi~~~ 33 (259)
T PRK12384 3 QVAVVIGGGQ--TLGAFLCHGLAEEGYRVAVAD 33 (259)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEE
Confidence 4699999995 999999999999999998854
No 111
>PRK07069 short chain dehydrogenase; Validated
Probab=84.66 E-value=1.4 Score=39.36 Aligned_cols=29 Identities=21% Similarity=0.334 Sum_probs=26.4
Q ss_pred EEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 203 VLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
|++||+++ =+|+++|..|+++|.+|.+.+
T Consensus 2 ilVtG~~~--~iG~~~a~~l~~~G~~v~~~~ 30 (251)
T PRK07069 2 AFITGAAG--GLGRAIARRMAEQGAKVFLTD 30 (251)
T ss_pred EEEECCCC--hHHHHHHHHHHHCCCEEEEEe
Confidence 79999995 899999999999999998854
No 112
>PRK07074 short chain dehydrogenase; Provisional
Probab=84.64 E-value=1.3 Score=39.93 Aligned_cols=31 Identities=19% Similarity=0.301 Sum_probs=27.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.+++||+++ -+|+++|..|.++|.+|++++
T Consensus 3 k~ilItGat~--~iG~~la~~L~~~g~~v~~~~ 33 (257)
T PRK07074 3 RTALVTGAAG--GIGQALARRFLAAGDRVLALD 33 (257)
T ss_pred CEEEEECCcc--hHHHHHHHHHHHCCCEEEEEe
Confidence 4689999995 899999999999999999854
No 113
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=84.62 E-value=1.4 Score=43.37 Aligned_cols=33 Identities=15% Similarity=0.133 Sum_probs=29.7
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
.-+.|++||+++ -||++++.+|.++|.+|..++
T Consensus 20 ~~~~IlVtGgtG--fIG~~l~~~L~~~G~~V~~v~ 52 (370)
T PLN02695 20 EKLRICITGAGG--FIASHIARRLKAEGHYIIASD 52 (370)
T ss_pred CCCEEEEECCcc--HHHHHHHHHHHhCCCEEEEEE
Confidence 446899999998 999999999999999999854
No 114
>PLN02583 cinnamoyl-CoA reductase
Probab=84.35 E-value=1.6 Score=41.30 Aligned_cols=31 Identities=16% Similarity=0.086 Sum_probs=28.1
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
-+.|++||+++ -+|++|+..|.++|.+|..+
T Consensus 6 ~k~vlVTGatG--~IG~~lv~~Ll~~G~~V~~~ 36 (297)
T PLN02583 6 SKSVCVMDASG--YVGFWLVKRLLSRGYTVHAA 36 (297)
T ss_pred CCEEEEECCCC--HHHHHHHHHHHhCCCEEEEE
Confidence 35799999996 99999999999999999874
No 115
>PRK08226 short chain dehydrogenase; Provisional
Probab=84.29 E-value=1.5 Score=39.79 Aligned_cols=33 Identities=12% Similarity=0.306 Sum_probs=28.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeechh
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICKD 235 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~ 235 (376)
+.+++||+++ =+|+++|..|+++|.+|++++..
T Consensus 7 ~~~lItG~s~--giG~~la~~l~~~G~~Vv~~~r~ 39 (263)
T PRK08226 7 KTALITGALQ--GIGEGIARVFARHGANLILLDIS 39 (263)
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEecCC
Confidence 6789999995 79999999999999999996543
No 116
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=84.29 E-value=1.5 Score=39.43 Aligned_cols=28 Identities=21% Similarity=0.433 Sum_probs=25.9
Q ss_pred EEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 203 VLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
|+++|++| ++|+.|+.+|-++|.+|..+
T Consensus 1 I~V~GatG--~~G~~v~~~L~~~~~~V~~l 28 (233)
T PF05368_consen 1 ILVTGATG--NQGRSVVRALLSAGFSVRAL 28 (233)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTGCEEEE
T ss_pred CEEECCcc--HHHHHHHHHHHhCCCCcEEE
Confidence 68999997 99999999999999999883
No 117
>PRK05876 short chain dehydrogenase; Provisional
Probab=84.25 E-value=1.8 Score=40.45 Aligned_cols=31 Identities=13% Similarity=0.206 Sum_probs=27.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ =||+++|..|+++|.+|++..
T Consensus 7 k~vlVTGas~--gIG~ala~~La~~G~~Vv~~~ 37 (275)
T PRK05876 7 RGAVITGGAS--GIGLATGTEFARRGARVVLGD 37 (275)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEe
Confidence 5699999995 899999999999999999843
No 118
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=84.14 E-value=1.9 Score=39.22 Aligned_cols=41 Identities=20% Similarity=0.330 Sum_probs=32.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec--hhHHHHHhhc
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKLR 243 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s--~~~~~~l~~~ 243 (376)
+.|++||+++ =+|+++|..|.++|.+|++.+ ++.-+.+..+
T Consensus 7 k~vlVtGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 49 (263)
T PRK06200 7 QVALITGGGS--GIGRALVERFLAEGARVAVLERSAEKLASLRQR 49 (263)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 5799999994 799999999999999998843 3444444443
No 119
>PRK06181 short chain dehydrogenase; Provisional
Probab=84.11 E-value=1.5 Score=39.71 Aligned_cols=32 Identities=19% Similarity=0.379 Sum_probs=28.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+-|++||+++ -+|+++|..|+++|.+|+.++.
T Consensus 2 ~~vlVtGasg--~iG~~la~~l~~~g~~Vi~~~r 33 (263)
T PRK06181 2 KVVIITGASE--GIGRALAVRLARAGAQLVLAAR 33 (263)
T ss_pred CEEEEecCCc--HHHHHHHHHHHHCCCEEEEEeC
Confidence 3589999995 8999999999999999998543
No 120
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=83.97 E-value=1.5 Score=39.28 Aligned_cols=29 Identities=17% Similarity=0.331 Sum_probs=26.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+-|++||+++ -||+++|..|+++|.+|++
T Consensus 4 k~~lVtG~s~--giG~~~a~~l~~~G~~vv~ 32 (246)
T PRK12938 4 RIAYVTGGMG--GIGTSICQRLHKDGFKVVA 32 (246)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHcCCEEEE
Confidence 5689999995 9999999999999999987
No 121
>PRK12937 short chain dehydrogenase; Provisional
Probab=83.93 E-value=1.9 Score=38.33 Aligned_cols=30 Identities=23% Similarity=0.327 Sum_probs=27.1
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+.|++||+++ =||+++|..|+++|.+|++.
T Consensus 6 ~~vlItG~~~--~iG~~la~~l~~~g~~v~~~ 35 (245)
T PRK12937 6 KVAIVTGASR--GIGAAIARRLAADGFAVAVN 35 (245)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEe
Confidence 5799999995 89999999999999999873
No 122
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=83.80 E-value=1.4 Score=40.00 Aligned_cols=31 Identities=16% Similarity=0.249 Sum_probs=27.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+-|++||+++ =||+++|..|.++|.+|++.+
T Consensus 10 k~vlItG~s~--gIG~~la~~l~~~G~~v~~~~ 40 (266)
T PRK06171 10 KIIIVTGGSS--GIGLAIVKELLANGANVVNAD 40 (266)
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEe
Confidence 5689999995 899999999999999999843
No 123
>PRK06114 short chain dehydrogenase; Provisional
Probab=83.79 E-value=1.7 Score=39.44 Aligned_cols=31 Identities=23% Similarity=0.310 Sum_probs=27.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+-+++||+++ =||+++|..|+++|.+|++.+
T Consensus 9 k~~lVtG~s~--gIG~~ia~~l~~~G~~v~~~~ 39 (254)
T PRK06114 9 QVAFVTGAGS--GIGQRIAIGLAQAGADVALFD 39 (254)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCEEEEEe
Confidence 5789999995 799999999999999999843
No 124
>PRK07985 oxidoreductase; Provisional
Probab=83.69 E-value=1.3 Score=41.82 Aligned_cols=30 Identities=23% Similarity=0.296 Sum_probs=27.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+.|++||+++ =||++||..|+++|.+|++.
T Consensus 50 k~vlITGas~--gIG~aia~~L~~~G~~Vi~~ 79 (294)
T PRK07985 50 RKALVTGGDS--GIGRAAAIAYAREGADVAIS 79 (294)
T ss_pred CEEEEECCCC--cHHHHHHHHHHHCCCEEEEe
Confidence 5799999995 89999999999999999984
No 125
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=83.69 E-value=1.9 Score=39.74 Aligned_cols=43 Identities=21% Similarity=0.266 Sum_probs=31.8
Q ss_pred ceEEEeccC-CchhHHHHHHHHHhcCCcEEEeech----hHHHHHhhcC
Q 017172 201 AHVLLRGTV-TANKVANAVASSLCQMGIKVATICK----DDYEKLKLRI 244 (376)
Q Consensus 201 ~eVfL~G~~-~~sKv~~AiA~~LC~rgv~V~m~s~----~~~~~l~~~~ 244 (376)
+-|++||+. + +=+|+++|..|+++|.+|++... +.-+.++.+.
T Consensus 8 k~~lItGa~~s-~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~ 55 (256)
T PRK07889 8 KRILVTGVITD-SSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL 55 (256)
T ss_pred CEEEEeCCCCc-chHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc
Confidence 568999982 2 57999999999999999998532 2344554443
No 126
>PRK08703 short chain dehydrogenase; Provisional
Probab=83.61 E-value=2.1 Score=38.31 Aligned_cols=31 Identities=19% Similarity=0.362 Sum_probs=27.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.||+||+++ =+|+++|..|+++|.+|++++
T Consensus 7 k~vlItG~sg--giG~~la~~l~~~g~~V~~~~ 37 (239)
T PRK08703 7 KTILVTGASQ--GLGEQVAKAYAAAGATVILVA 37 (239)
T ss_pred CEEEEECCCC--cHHHHHHHHHHHcCCEEEEEe
Confidence 5799999985 799999999999999999844
No 127
>PLN02650 dihydroflavonol-4-reductase
Probab=83.61 E-value=1.3 Score=42.43 Aligned_cols=31 Identities=16% Similarity=0.191 Sum_probs=27.9
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
-+.||+||+++ -||++++..|.++|.+|..+
T Consensus 5 ~k~iLVTGatG--fIGs~l~~~L~~~G~~V~~~ 35 (351)
T PLN02650 5 KETVCVTGASG--FIGSWLVMRLLERGYTVRAT 35 (351)
T ss_pred CCEEEEeCCcH--HHHHHHHHHHHHCCCEEEEE
Confidence 35799999996 99999999999999999863
No 128
>PRK07677 short chain dehydrogenase; Provisional
Probab=83.59 E-value=2.1 Score=38.71 Aligned_cols=31 Identities=19% Similarity=0.320 Sum_probs=27.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.+++||+++ =||+++|..|.++|.+|++.+
T Consensus 2 k~~lItG~s~--giG~~ia~~l~~~G~~Vi~~~ 32 (252)
T PRK07677 2 KVVIITGGSS--GMGKAMAKRFAEEGANVVITG 32 (252)
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEe
Confidence 5689999995 799999999999999998854
No 129
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=83.55 E-value=2.2 Score=37.96 Aligned_cols=31 Identities=19% Similarity=0.272 Sum_probs=27.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ -+|+++|..|.++|.+|.++.
T Consensus 4 ~~ilItGas~--~iG~~la~~l~~~g~~v~~~~ 34 (250)
T TIGR03206 4 KTAIVTGGGG--GIGGATCRRFAEEGAKVAVFD 34 (250)
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEec
Confidence 5789999995 999999999999999998843
No 130
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=83.45 E-value=1.7 Score=38.81 Aligned_cols=31 Identities=26% Similarity=0.452 Sum_probs=27.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+-|++||+++ -+|+++|.+|+++|.+|+.++
T Consensus 8 ~~vlVtG~sg--~iG~~l~~~L~~~G~~Vi~~~ 38 (239)
T PRK07666 8 KNALITGAGR--GIGRAVAIALAKEGVNVGLLA 38 (239)
T ss_pred CEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEe
Confidence 5699999995 999999999999999998854
No 131
>PRK12746 short chain dehydrogenase; Provisional
Probab=83.38 E-value=1.6 Score=39.26 Aligned_cols=29 Identities=28% Similarity=0.340 Sum_probs=26.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.|++||+++ -+|+++|.+|.++|.+|++
T Consensus 7 ~~ilItGasg--~iG~~la~~l~~~G~~v~i 35 (254)
T PRK12746 7 KVALVTGASR--GIGRAIAMRLANDGALVAI 35 (254)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 5799999995 9999999999999999977
No 132
>PRK09072 short chain dehydrogenase; Provisional
Probab=83.35 E-value=2.2 Score=38.83 Aligned_cols=31 Identities=26% Similarity=0.432 Sum_probs=27.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ =||++||..|+++|.+|++.+
T Consensus 6 ~~vlItG~s~--~iG~~ia~~l~~~G~~V~~~~ 36 (263)
T PRK09072 6 KRVLLTGASG--GIGQALAEALAAAGARLLLVG 36 (263)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCEEEEEE
Confidence 4699999995 899999999999999999854
No 133
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=83.34 E-value=2.2 Score=38.60 Aligned_cols=31 Identities=26% Similarity=0.320 Sum_probs=27.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ =+|++||..|.++|.+|++..
T Consensus 7 ~~vlItGas~--~iG~~ia~~l~~~G~~v~~~~ 37 (257)
T PRK07067 7 KVALLTGAAS--GIGEAVAERYLAEGARVVIAD 37 (257)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEc
Confidence 5699999995 799999999999999999843
No 134
>PRK07060 short chain dehydrogenase; Provisional
Probab=83.26 E-value=2.8 Score=37.23 Aligned_cols=34 Identities=26% Similarity=0.439 Sum_probs=29.3
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
.-+.+++||+++ -+|+++|..|.++|.+|+++++
T Consensus 8 ~~~~~lItGa~g--~iG~~~a~~l~~~g~~V~~~~r 41 (245)
T PRK07060 8 SGKSVLVTGASS--GIGRACAVALAQRGARVVAAAR 41 (245)
T ss_pred CCCEEEEeCCcc--hHHHHHHHHHHHCCCEEEEEeC
Confidence 346799999995 8999999999999999998543
No 135
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=83.23 E-value=1.6 Score=38.41 Aligned_cols=30 Identities=27% Similarity=0.412 Sum_probs=26.4
Q ss_pred EEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 203 VLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
|++||+++ -+|+.+|..|+++|.+|++.++
T Consensus 1 vlItG~~g--~iG~~la~~l~~~G~~v~~~~r 30 (239)
T TIGR01830 1 ALVTGASR--GIGRAIALKLAKEGAKVIITYR 30 (239)
T ss_pred CEEECCCc--HHHHHHHHHHHHCCCEEEEEeC
Confidence 58999995 8999999999999999988543
No 136
>PRK05875 short chain dehydrogenase; Provisional
Probab=83.22 E-value=2.2 Score=39.01 Aligned_cols=32 Identities=22% Similarity=0.343 Sum_probs=28.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+.|++||+++ =+|+++|..|+++|.+|..+++
T Consensus 8 k~vlItGasg--~IG~~la~~l~~~G~~V~~~~r 39 (276)
T PRK05875 8 RTYLVTGGGS--GIGKGVAAGLVAAGAAVMIVGR 39 (276)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeC
Confidence 6899999995 8999999999999999998543
No 137
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=83.06 E-value=2 Score=39.31 Aligned_cols=30 Identities=17% Similarity=0.390 Sum_probs=27.3
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
|-|++||+++ =||++||..|+++|.+|++.
T Consensus 9 k~vlItGas~--gIG~~ia~~l~~~G~~v~~~ 38 (260)
T PRK08416 9 KTLVISGGTR--GIGKAIVYEFAQSGVNIAFT 38 (260)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEE
Confidence 5789999994 79999999999999999884
No 138
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=82.99 E-value=1.6 Score=40.88 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=27.4
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
|-+++||+++.+=+|+|||..|.++|.+|++.+
T Consensus 8 k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~ 40 (271)
T PRK06505 8 KRGLIMGVANDHSIAWGIAKQLAAQGAELAFTY 40 (271)
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEec
Confidence 568999998211499999999999999999943
No 139
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=82.89 E-value=1.7 Score=38.64 Aligned_cols=33 Identities=24% Similarity=0.330 Sum_probs=28.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeechh
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICKD 235 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~ 235 (376)
+.+++||+++ =||+++|..|.++|.+|++.+++
T Consensus 6 k~~lVtGas~--~iG~~ia~~l~~~G~~v~~~~r~ 38 (235)
T PRK06550 6 KTVLITGAAS--GIGLAQARAFLAQGAQVYGVDKQ 38 (235)
T ss_pred CEEEEcCCCc--hHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999995 89999999999999999885543
No 140
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=82.77 E-value=2.2 Score=38.67 Aligned_cols=30 Identities=27% Similarity=0.437 Sum_probs=27.4
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+-|++||+++ =+|+++|..|+++|.+|++.
T Consensus 8 k~~lItGas~--gIG~~~a~~l~~~G~~v~~~ 37 (255)
T PRK06463 8 KVALITGGTR--GIGRAIAEAFLREGAKVAVL 37 (255)
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEE
Confidence 6799999994 89999999999999999884
No 141
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=82.76 E-value=2 Score=39.41 Aligned_cols=33 Identities=15% Similarity=0.243 Sum_probs=27.4
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
|-|++||+++.+=+|+|+|..|+++|.+|++.+
T Consensus 8 k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~ 40 (252)
T PRK06079 8 KKIVVMGVANKRSIAWGCAQAIKDQGATVIYTY 40 (252)
T ss_pred CEEEEeCCCCCCchHHHHHHHHHHCCCEEEEec
Confidence 678999998201499999999999999999954
No 142
>PRK08862 short chain dehydrogenase; Provisional
Probab=82.73 E-value=2.3 Score=39.00 Aligned_cols=31 Identities=6% Similarity=0.233 Sum_probs=27.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.+++||+++ =+|++||..|+++|.+|++.+
T Consensus 6 k~~lVtGas~--GIG~aia~~la~~G~~V~~~~ 36 (227)
T PRK08862 6 SIILITSAGS--VLGRTISCHFARLGATLILCD 36 (227)
T ss_pred eEEEEECCcc--HHHHHHHHHHHHCCCEEEEEc
Confidence 6789999994 799999999999999999954
No 143
>PRK07806 short chain dehydrogenase; Provisional
Probab=82.70 E-value=2.1 Score=38.32 Aligned_cols=31 Identities=19% Similarity=0.259 Sum_probs=27.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ -+|+++|..|.++|.+|++.+
T Consensus 7 k~vlItGasg--giG~~l~~~l~~~G~~V~~~~ 37 (248)
T PRK07806 7 KTALVTGSSR--GIGADTAKILAGAGAHVVVNY 37 (248)
T ss_pred cEEEEECCCC--cHHHHHHHHHHHCCCEEEEEe
Confidence 5799999995 899999999999999998743
No 144
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=82.52 E-value=1.6 Score=39.34 Aligned_cols=29 Identities=28% Similarity=0.359 Sum_probs=27.1
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
.|+++|+++ +||++++..|-++|.+|...
T Consensus 2 ~ilV~GatG--~~G~~~~~~L~~~~~~v~~~ 30 (275)
T COG0702 2 KILVTGATG--FVGGAVVRELLARGHEVRAA 30 (275)
T ss_pred eEEEEeccc--chHHHHHHHHHhCCCEEEEE
Confidence 589999998 99999999999999999993
No 145
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=82.45 E-value=2.2 Score=38.07 Aligned_cols=29 Identities=24% Similarity=0.421 Sum_probs=26.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.+++||+++ =+|+++|..|+++|.+|++
T Consensus 6 k~ilItGas~--gIG~~la~~l~~~G~~vv~ 34 (253)
T PRK08642 6 QTVLVTGGSR--GLGAAIARAFAREGARVVV 34 (253)
T ss_pred CEEEEeCCCC--cHHHHHHHHHHHCCCeEEE
Confidence 5799999995 7999999999999999987
No 146
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=82.44 E-value=1.5 Score=40.51 Aligned_cols=30 Identities=30% Similarity=0.387 Sum_probs=27.2
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
.|++||+++ -+|+.+|..|.++|.+|..++
T Consensus 2 ~vlItG~~G--~iG~~l~~~L~~~g~~V~~~~ 31 (328)
T TIGR03466 2 KVLVTGATG--FVGSAVVRLLLEQGEEVRVLV 31 (328)
T ss_pred eEEEECCcc--chhHHHHHHHHHCCCEEEEEE
Confidence 589999996 999999999999999998844
No 147
>PRK05650 short chain dehydrogenase; Provisional
Probab=82.39 E-value=2.4 Score=38.82 Aligned_cols=29 Identities=21% Similarity=0.394 Sum_probs=26.6
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
.|++||+++ =+|+++|..|.++|.+|+..
T Consensus 2 ~vlVtGasg--gIG~~la~~l~~~g~~V~~~ 30 (270)
T PRK05650 2 RVMITGAAS--GLGRAIALRWAREGWRLALA 30 (270)
T ss_pred EEEEecCCC--hHHHHHHHHHHHCCCEEEEE
Confidence 589999995 89999999999999999884
No 148
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=82.22 E-value=1.8 Score=38.55 Aligned_cols=29 Identities=24% Similarity=0.431 Sum_probs=25.7
Q ss_pred EEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 203 VLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
|++||+++ =+|+++|..|+++|.+|++.+
T Consensus 1 vlItGas~--giG~~~a~~l~~~G~~v~~~~ 29 (239)
T TIGR01831 1 VLVTGASR--GIGRAIANRLAADGFEICVHY 29 (239)
T ss_pred CEEeCCCc--hHHHHHHHHHHHCCCEEEEEe
Confidence 58999995 799999999999999998843
No 149
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=82.19 E-value=3 Score=38.14 Aligned_cols=37 Identities=16% Similarity=0.212 Sum_probs=31.5
Q ss_pred hcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 194 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 194 n~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
|..+-..+-+++||+++ =||++||..|.++|.+|++.
T Consensus 4 ~~~~~~~k~~lItGa~~--~iG~~ia~~l~~~G~~vv~~ 40 (265)
T PRK07097 4 NLFSLKGKIALITGASY--GIGFAIAKAYAKAGATIVFN 40 (265)
T ss_pred cccCCCCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEE
Confidence 44555567899999995 79999999999999999984
No 150
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=82.17 E-value=1.9 Score=44.11 Aligned_cols=38 Identities=18% Similarity=0.257 Sum_probs=31.7
Q ss_pred hcCCcCCc----eEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 194 NSLPKTTA----HVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 194 n~IP~~t~----eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
-.||-|.+ .||+||+++ -||+.++.+|.++|.+|+.++
T Consensus 110 ~~~~~~~~~~~mkILVTGatG--FIGs~Lv~~Ll~~G~~V~~ld 151 (436)
T PLN02166 110 GRVPVGIGRKRLRIVVTGGAG--FVGSHLVDKLIGRGDEVIVID 151 (436)
T ss_pred CCCCcccccCCCEEEEECCcc--HHHHHHHHHHHHCCCEEEEEe
Confidence 44555443 699999997 999999999999999999854
No 151
>PRK06125 short chain dehydrogenase; Provisional
Probab=82.03 E-value=2.6 Score=38.25 Aligned_cols=31 Identities=19% Similarity=0.373 Sum_probs=27.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+-|++||+++ =+|++||..|+++|.+|++.+
T Consensus 8 k~vlItG~~~--giG~~ia~~l~~~G~~V~~~~ 38 (259)
T PRK06125 8 KRVLITGASK--GIGAAAAEAFAAEGCHLHLVA 38 (259)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEe
Confidence 6799999985 799999999999999999843
No 152
>PRK07035 short chain dehydrogenase; Provisional
Probab=81.85 E-value=2.8 Score=37.70 Aligned_cols=31 Identities=26% Similarity=0.344 Sum_probs=28.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ =+|+++|..|.++|.+|++++
T Consensus 9 k~vlItGas~--gIG~~l~~~l~~~G~~Vi~~~ 39 (252)
T PRK07035 9 KIALVTGASR--GIGEAIAKLLAQQGAHVIVSS 39 (252)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEe
Confidence 5699999995 899999999999999999854
No 153
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=81.45 E-value=2.7 Score=39.93 Aligned_cols=31 Identities=26% Similarity=0.435 Sum_probs=27.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+-|++||+++ =||+++|..|+++|.+|++.+
T Consensus 7 k~vlVTGas~--gIG~~~a~~L~~~G~~V~~~~ 37 (322)
T PRK07453 7 GTVIITGASS--GVGLYAAKALAKRGWHVIMAC 37 (322)
T ss_pred CEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEE
Confidence 4699999995 899999999999999999853
No 154
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=81.43 E-value=2.3 Score=42.58 Aligned_cols=39 Identities=21% Similarity=0.317 Sum_probs=32.3
Q ss_pred hcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 194 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 194 n~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
.+.+..-+.|++||+++ .+|++++..|.++|.+|..+.+
T Consensus 54 ~~~~~~~~kVLVtGatG--~IG~~l~~~Ll~~G~~V~~l~R 92 (390)
T PLN02657 54 RSKEPKDVTVLVVGATG--YIGKFVVRELVRRGYNVVAVAR 92 (390)
T ss_pred cccCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEEe
Confidence 34555556799999996 9999999999999999988543
No 155
>PRK05693 short chain dehydrogenase; Provisional
Probab=81.39 E-value=3 Score=38.34 Aligned_cols=31 Identities=23% Similarity=0.341 Sum_probs=27.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
|-|++||+++ =+|+++|..|.++|.+|++++
T Consensus 2 k~vlItGasg--giG~~la~~l~~~G~~V~~~~ 32 (274)
T PRK05693 2 PVVLITGCSS--GIGRALADAFKAAGYEVWATA 32 (274)
T ss_pred CEEEEecCCC--hHHHHHHHHHHHCCCEEEEEe
Confidence 5689999995 899999999999999999843
No 156
>PRK07576 short chain dehydrogenase; Provisional
Probab=81.29 E-value=2.2 Score=39.26 Aligned_cols=32 Identities=19% Similarity=0.342 Sum_probs=28.5
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
-+.|++||+++ -||+++|..|+++|.+|++.+
T Consensus 9 ~k~ilItGasg--gIG~~la~~l~~~G~~V~~~~ 40 (264)
T PRK07576 9 GKNVVVVGGTS--GINLGIAQAFARAGANVAVAS 40 (264)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEe
Confidence 46799999995 999999999999999998854
No 157
>PRK12827 short chain dehydrogenase; Provisional
Probab=81.23 E-value=2.1 Score=37.89 Aligned_cols=29 Identities=28% Similarity=0.367 Sum_probs=26.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.+++||+++ =+|+++|..|+++|.+|++
T Consensus 7 ~~ilItGasg--~iG~~la~~l~~~g~~v~~ 35 (249)
T PRK12827 7 RRVLITGGSG--GLGRAIAVRLAADGADVIV 35 (249)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCeEEE
Confidence 5799999995 8999999999999999987
No 158
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=81.21 E-value=3.5 Score=40.99 Aligned_cols=83 Identities=20% Similarity=0.239 Sum_probs=59.4
Q ss_pred hcCCeEEeecccccccccccccceeeeccCCCccEEEEcCCceehhh----------hhhcCCcCCceEEEeccCCchhH
Q 017172 145 AKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAV----------VVNSLPKTTAHVLLRGTVTANKV 214 (376)
Q Consensus 145 ~~GvKVlSLGlLNq~e~LN~~G~l~v~k~P~~LrvrVVdGstLtaAv----------Vln~IP~~t~eVfL~G~~~~sKv 214 (376)
..|+.|+++- ++|..+ .| +-..++--|+.|..+. .+...+...+.|++.|.. ++
T Consensus 179 ~~~~~vi~i~---------r~~~~~---~p-~~~~~l~~gD~l~v~g~~~~l~~~~~~~~~~~~~~~~iiIiG~G---~~ 242 (453)
T PRK09496 179 DIDVRVVAIF---------RGGRLI---IP-RGDTVIEAGDEVYFIGAREHIRAVMSEFGRLEKPVKRVMIVGGG---NI 242 (453)
T ss_pred CCceEEEEEE---------ECCEEE---cC-CCCcEecCCCEEEEEeCHHHHHHHHHHhCccCCCCCEEEEECCC---HH
Confidence 4799888773 234432 36 6677777788776533 222333356889999997 99
Q ss_pred HHHHHHHHhcCCcEEEee--chhHHHHHhhc
Q 017172 215 ANAVASSLCQMGIKVATI--CKDDYEKLKLR 243 (376)
Q Consensus 215 ~~AiA~~LC~rgv~V~m~--s~~~~~~l~~~ 243 (376)
|+.+|..|-++|++|+++ +.+..+.++.+
T Consensus 243 g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~ 273 (453)
T PRK09496 243 GYYLAKLLEKEGYSVKLIERDPERAEELAEE 273 (453)
T ss_pred HHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence 999999999999999984 56667766654
No 159
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=81.16 E-value=2.3 Score=41.01 Aligned_cols=31 Identities=19% Similarity=0.202 Sum_probs=27.8
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
.+.||+||+++ =||+++|.+|.++|.+|+.+
T Consensus 10 ~~~vLVtG~~G--fIG~~l~~~L~~~G~~V~~~ 40 (353)
T PLN02896 10 TGTYCVTGATG--YIGSWLVKLLLQRGYTVHAT 40 (353)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEE
Confidence 44699999996 89999999999999999873
No 160
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=81.07 E-value=1.5 Score=39.98 Aligned_cols=29 Identities=21% Similarity=0.378 Sum_probs=26.5
Q ss_pred EEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 203 VLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
||+||+++ -||++++..|.++|.+|..++
T Consensus 1 vlVtGatG--~iG~~l~~~L~~~g~~V~~~~ 29 (292)
T TIGR01777 1 ILITGGTG--FIGRALTQRLTKDGHEVTILT 29 (292)
T ss_pred CEEEcccc--hhhHHHHHHHHHcCCEEEEEe
Confidence 68999997 999999999999999998844
No 161
>PRK06128 oxidoreductase; Provisional
Probab=81.07 E-value=1.9 Score=40.60 Aligned_cols=30 Identities=20% Similarity=0.325 Sum_probs=27.5
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+.|++||+++ =||+++|..|+++|.+|++.
T Consensus 56 k~vlITGas~--gIG~~~a~~l~~~G~~V~i~ 85 (300)
T PRK06128 56 RKALITGADS--GIGRATAIAFAREGADIALN 85 (300)
T ss_pred CEEEEecCCC--cHHHHHHHHHHHcCCEEEEE
Confidence 6799999995 89999999999999999883
No 162
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=80.97 E-value=3 Score=38.29 Aligned_cols=32 Identities=25% Similarity=0.342 Sum_probs=28.2
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+-|++||+++ =+|++||..|.++|.+|.+.++
T Consensus 11 k~vlVtGas~--giG~~ia~~l~~~G~~V~~~~r 42 (278)
T PRK08277 11 KVAVITGGGG--VLGGAMAKELARAGAKVAILDR 42 (278)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeC
Confidence 5789999995 7999999999999999998543
No 163
>PRK06139 short chain dehydrogenase; Provisional
Probab=80.96 E-value=2.6 Score=41.26 Aligned_cols=31 Identities=19% Similarity=0.392 Sum_probs=28.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+-|++||+++ =||+++|..|+++|.+|++.+
T Consensus 8 k~vlITGAs~--GIG~aia~~la~~G~~Vvl~~ 38 (330)
T PRK06139 8 AVVVITGASS--GIGQATAEAFARRGARLVLAA 38 (330)
T ss_pred CEEEEcCCCC--HHHHHHHHHHHHCCCEEEEEE
Confidence 6799999994 899999999999999999943
No 164
>PRK06138 short chain dehydrogenase; Provisional
Probab=80.91 E-value=3.1 Score=37.15 Aligned_cols=31 Identities=16% Similarity=0.248 Sum_probs=27.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+-+++||+++ -||+++|..|.++|.+|+++.
T Consensus 6 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~ 36 (252)
T PRK06138 6 RVAIVTGAGS--GIGRATAKLFAREGARVVVAD 36 (252)
T ss_pred cEEEEeCCCc--hHHHHHHHHHHHCCCeEEEec
Confidence 5789999995 999999999999999998843
No 165
>PRK07109 short chain dehydrogenase; Provisional
Probab=80.76 E-value=2.8 Score=40.78 Aligned_cols=32 Identities=25% Similarity=0.395 Sum_probs=28.3
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
-+.|++||+++ =||+++|..|+++|.+|++++
T Consensus 8 ~k~vlITGas~--gIG~~la~~la~~G~~Vvl~~ 39 (334)
T PRK07109 8 RQVVVITGASA--GVGRATARAFARRGAKVVLLA 39 (334)
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEE
Confidence 36799999994 899999999999999998844
No 166
>PRK08618 ornithine cyclodeaminase; Validated
Probab=80.71 E-value=13 Score=36.47 Aligned_cols=96 Identities=18% Similarity=0.168 Sum_probs=61.8
Q ss_pred hcCCeEEeecccccccccc-cccceeeeccCCCccEEEEcCCceeh-------hhhhhcC-CcCCceEEEeccCCchhHH
Q 017172 145 AKGVKVISLGLLNQGEELN-RNGEIYLERQPNKLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 215 (376)
Q Consensus 145 ~~GvKVlSLGlLNq~e~LN-~~G~l~v~k~P~~LrvrVVdGstLta-------AvVln~I-P~~t~eVfL~G~~~~sKv~ 215 (376)
-.|+|+++.--=|-..-|- -.|.+.+.-..+..-+=++||+.||+ |+...-+ +++.+.|.+.|+. ..|
T Consensus 63 ~~g~K~~~~~p~n~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaa~sala~~~la~~~~~~v~iiGaG---~~a 139 (325)
T PRK08618 63 ALGLKIVSVVPENKKKGKPTIPGTVILSDFETGEVLAILDGTYLTQIRTGALSGVATKYLAREDAKTLCLIGTG---GQA 139 (325)
T ss_pred eEEEEEEeecCCCcccCCCcceEEEEEEeCCCCceEEEEccchhhhhhHHHHHHHHHHHhcCCCCcEEEEECCc---HHH
Confidence 4699999875555433333 33444443322356678899999974 3334556 6789999999999 789
Q ss_pred HHHHHHHh-cCCcEEEe-e--chhHHHHHhhc
Q 017172 216 NAVASSLC-QMGIKVAT-I--CKDDYEKLKLR 243 (376)
Q Consensus 216 ~AiA~~LC-~rgv~V~m-~--s~~~~~~l~~~ 243 (376)
++++.+|+ .++++-+. . +.++-+.+.++
T Consensus 140 ~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~ 171 (325)
T PRK08618 140 KGQLEAVLAVRDIERVRVYSRTFEKAYAFAQE 171 (325)
T ss_pred HHHHHHHHhcCCccEEEEECCCHHHHHHHHHH
Confidence 99999887 45765544 3 33444444443
No 167
>PRK07832 short chain dehydrogenase; Provisional
Probab=80.68 E-value=2.4 Score=39.01 Aligned_cols=30 Identities=17% Similarity=0.257 Sum_probs=26.8
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
.|++||+++ =+|+++|..|+++|.+|++++
T Consensus 2 ~vlItGas~--giG~~la~~la~~G~~vv~~~ 31 (272)
T PRK07832 2 RCFVTGAAS--GIGRATALRLAAQGAELFLTD 31 (272)
T ss_pred EEEEeCCCC--HHHHHHHHHHHHCCCEEEEEe
Confidence 589999995 899999999999999998844
No 168
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=80.61 E-value=2.4 Score=38.40 Aligned_cols=32 Identities=13% Similarity=0.230 Sum_probs=28.5
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
-+-|++||+++ =+|+++|..|+++|.+|++.+
T Consensus 11 ~k~vlVtG~s~--gIG~~la~~l~~~G~~vv~~~ 42 (255)
T PRK06113 11 GKCAIITGAGA--GIGKEIAITFATAGASVVVSD 42 (255)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEe
Confidence 47899999994 899999999999999998843
No 169
>PRK09134 short chain dehydrogenase; Provisional
Probab=80.51 E-value=2.9 Score=37.99 Aligned_cols=30 Identities=27% Similarity=0.460 Sum_probs=27.1
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
-+.||+||+++ =||+++|..|.++|.+|++
T Consensus 9 ~k~vlItGas~--giG~~la~~l~~~g~~v~~ 38 (258)
T PRK09134 9 PRAALVTGAAR--RIGRAIALDLAAHGFDVAV 38 (258)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEE
Confidence 35799999995 9999999999999999977
No 170
>PLN02214 cinnamoyl-CoA reductase
Probab=80.46 E-value=2.1 Score=41.46 Aligned_cols=31 Identities=19% Similarity=0.179 Sum_probs=28.0
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
.+.||+||+++ -||++++..|.++|.+|..+
T Consensus 10 ~~~vlVTGatG--fIG~~l~~~L~~~G~~V~~~ 40 (342)
T PLN02214 10 GKTVCVTGAGG--YIASWIVKILLERGYTVKGT 40 (342)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCcCEEEEE
Confidence 35799999996 99999999999999999874
No 171
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=80.42 E-value=2.1 Score=40.33 Aligned_cols=29 Identities=24% Similarity=0.322 Sum_probs=26.8
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
.|++||+++ -||+++|.+|.++|.+|+++
T Consensus 2 ~vlVtGatG--~iG~~l~~~L~~~g~~V~~~ 30 (338)
T PRK10675 2 RVLVTGGSG--YIGSHTCVQLLQNGHDVVIL 30 (338)
T ss_pred eEEEECCCC--hHHHHHHHHHHHCCCeEEEE
Confidence 589999996 99999999999999999884
No 172
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=80.09 E-value=2.3 Score=37.35 Aligned_cols=27 Identities=22% Similarity=0.397 Sum_probs=25.2
Q ss_pred EEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 203 VLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
||++|+++ =||++++.+|.++|.+|+.
T Consensus 1 IlI~GatG--~iG~~l~~~l~~~g~~v~~ 27 (236)
T PF01370_consen 1 ILITGATG--FIGSALVRQLLKKGHEVIV 27 (236)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTTEEEE
T ss_pred EEEEccCC--HHHHHHHHHHHHcCCcccc
Confidence 79999997 9999999999999999775
No 173
>PRK12743 oxidoreductase; Provisional
Probab=80.08 E-value=2.9 Score=38.01 Aligned_cols=30 Identities=17% Similarity=0.263 Sum_probs=27.1
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+.|++||+++ =||+++|..|.++|.+|++.
T Consensus 3 k~vlItGas~--giG~~~a~~l~~~G~~V~~~ 32 (256)
T PRK12743 3 QVAIVTASDS--GIGKACALLLAQQGFDIGIT 32 (256)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCEEEEE
Confidence 5689999995 89999999999999999873
No 174
>PRK12747 short chain dehydrogenase; Provisional
Probab=80.04 E-value=3 Score=37.60 Aligned_cols=30 Identities=27% Similarity=0.321 Sum_probs=27.1
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+-+++||+++ =+|++||..|.+.|.+|++.
T Consensus 5 k~~lItGas~--gIG~~ia~~l~~~G~~v~~~ 34 (252)
T PRK12747 5 KVALVTGASR--GIGRAIAKRLANDGALVAIH 34 (252)
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCCeEEEE
Confidence 5789999995 89999999999999999873
No 175
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=79.95 E-value=3.5 Score=37.04 Aligned_cols=32 Identities=19% Similarity=0.296 Sum_probs=28.3
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+-|++||+++ =+|+++|..|.++|.+|++.+.
T Consensus 8 ~~vlItGasg--~iG~~la~~l~~~G~~v~~~~r 39 (262)
T PRK13394 8 KTAVVTGAAS--GIGKEIALELARAGAAVAIADL 39 (262)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCeEEEEeC
Confidence 5799999995 7999999999999999998543
No 176
>PLN02240 UDP-glucose 4-epimerase
Probab=79.72 E-value=2.6 Score=40.04 Aligned_cols=31 Identities=23% Similarity=0.278 Sum_probs=28.2
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ -||++++..|.++|.+|+.++
T Consensus 6 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~ 36 (352)
T PLN02240 6 RTILVTGGAG--YIGSHTVLQLLLAGYKVVVID 36 (352)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEe
Confidence 5799999997 999999999999999998854
No 177
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=79.64 E-value=2.4 Score=39.14 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=26.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+.|++||+++++=+|+|+|..|+++|.+|++.
T Consensus 7 k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~ 38 (261)
T PRK08690 7 KKILITGMISERSIAYGIAKACREQGAELAFT 38 (261)
T ss_pred cEEEEECCCCCCcHHHHHHHHHHHCCCEEEEE
Confidence 57899997431359999999999999999984
No 178
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=79.53 E-value=2.2 Score=41.32 Aligned_cols=32 Identities=16% Similarity=0.136 Sum_probs=27.2
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcE-EEeech
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIK-VATICK 234 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~-V~m~s~ 234 (376)
-+.|+++|+. -.|+|||.+|.+.|++ |.+.++
T Consensus 126 ~k~vlI~GAG---GagrAia~~La~~G~~~V~I~~R 158 (289)
T PRK12548 126 GKKLTVIGAG---GAATAIQVQCALDGAKEITIFNI 158 (289)
T ss_pred CCEEEEECCc---HHHHHHHHHHHHCCCCEEEEEeC
Confidence 4689999996 6899999999999997 888554
No 179
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=79.49 E-value=2.4 Score=43.52 Aligned_cols=32 Identities=25% Similarity=0.348 Sum_probs=28.5
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
-+.|++||+++ -+|+++|..|+++|.+|+..+
T Consensus 178 gK~VLITGASg--GIG~aLA~~La~~G~~Vi~l~ 209 (406)
T PRK07424 178 GKTVAVTGASG--TLGQALLKELHQQGAKVVALT 209 (406)
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEe
Confidence 36899999995 999999999999999998843
No 180
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=79.43 E-value=3.8 Score=36.74 Aligned_cols=31 Identities=23% Similarity=0.326 Sum_probs=27.5
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
|.|++||+++ =||+++|..|+++|.+|+++.
T Consensus 1 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~ 31 (254)
T TIGR02415 1 KVALVTGGAQ--GIGKGIAERLAKDGFAVAVAD 31 (254)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEe
Confidence 4689999995 899999999999999998854
No 181
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=79.38 E-value=2.3 Score=39.10 Aligned_cols=29 Identities=17% Similarity=0.349 Sum_probs=26.4
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
.|++||+++ .||++++..|.++|.+|...
T Consensus 1 kvlV~GatG--~iG~~l~~~l~~~g~~V~~~ 29 (328)
T TIGR01179 1 KILVTGGAG--YIGSHTVRQLLESGHEVVVL 29 (328)
T ss_pred CEEEeCCCC--HHHHHHHHHHHhCCCeEEEE
Confidence 489999997 99999999999999999874
No 182
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=79.33 E-value=2.8 Score=39.26 Aligned_cols=33 Identities=18% Similarity=0.346 Sum_probs=27.1
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+-+++||++++.=+|+|||..|+++|.+|++.+
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~G~~vil~~ 39 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREGAELAFTY 39 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEe
Confidence 568999998311499999999999999998843
No 183
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=79.30 E-value=3.5 Score=36.85 Aligned_cols=29 Identities=24% Similarity=0.397 Sum_probs=26.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.|++||+++ =||+++|..|.++|.+|++
T Consensus 7 ~~~lItG~s~--~iG~~la~~l~~~g~~v~~ 35 (247)
T PRK12935 7 KVAIVTGGAK--GIGKAITVALAQEGAKVVI 35 (247)
T ss_pred CEEEEECCCC--HHHHHHHHHHHHcCCEEEE
Confidence 6799999994 8999999999999999987
No 184
>PLN02686 cinnamoyl-CoA reductase
Probab=79.29 E-value=2.3 Score=41.96 Aligned_cols=31 Identities=23% Similarity=0.267 Sum_probs=28.2
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
.-+.||+||+++ -||++++..|.++|.+|.+
T Consensus 52 ~~k~VLVTGatG--fIG~~lv~~L~~~G~~V~~ 82 (367)
T PLN02686 52 EARLVCVTGGVS--FLGLAIVDRLLRHGYSVRI 82 (367)
T ss_pred CCCEEEEECCch--HHHHHHHHHHHHCCCEEEE
Confidence 456899999996 9999999999999999976
No 185
>PRK08303 short chain dehydrogenase; Provisional
Probab=79.28 E-value=2.5 Score=40.70 Aligned_cols=31 Identities=19% Similarity=0.222 Sum_probs=27.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+-|++||+++ =+|+++|.+|+++|.+|++.+
T Consensus 9 k~~lITGgs~--GIG~aia~~la~~G~~Vv~~~ 39 (305)
T PRK08303 9 KVALVAGATR--GAGRGIAVELGAAGATVYVTG 39 (305)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEe
Confidence 6789999994 799999999999999999844
No 186
>PRK06701 short chain dehydrogenase; Provisional
Probab=79.17 E-value=3 Score=39.39 Aligned_cols=32 Identities=22% Similarity=0.314 Sum_probs=28.1
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+-|++||+++ =||++||..|.++|.+|++.+.
T Consensus 47 k~iLItGasg--gIG~~la~~l~~~G~~V~l~~r 78 (290)
T PRK06701 47 KVALITGGDS--GIGRAVAVLFAKEGADIAIVYL 78 (290)
T ss_pred CEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeC
Confidence 5799999995 7999999999999999988543
No 187
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=79.11 E-value=4.3 Score=37.34 Aligned_cols=32 Identities=19% Similarity=0.281 Sum_probs=27.1
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
|-|++||+++++=+|+|+|..|.++|.+|++.
T Consensus 11 k~~lItGas~g~GIG~a~a~~la~~G~~v~l~ 42 (258)
T PRK07533 11 KRGLVVGIANEQSIAWGCARAFRALGAELAVT 42 (258)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEE
Confidence 67899999831159999999999999999884
No 188
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=79.01 E-value=2.5 Score=43.44 Aligned_cols=99 Identities=22% Similarity=0.346 Sum_probs=58.2
Q ss_pred eceeEEeeccCc-eeccchhhhHHHHHHHHHHHHHHhcCCeEEee--cccccccccccccceeeeccCCCccEEEEcCCc
Q 017172 110 KLQTWVVPRYIV-QYNLPWRREAINSLIEEAILEADAKGVKVISL--GLLNQGEELNRNGEIYLERQPNKLKIKVVDGSS 186 (376)
Q Consensus 110 ~~qtWviPRy~f-qY~l~~~~~~IN~lIE~AIl~Ad~~GvKVlSL--GlLNq~e~LN~~G~l~v~k~P~~LrvrVVdGst 186 (376)
+...-++|.-+- -|..|.-.+.+.+| .+.|+.|+.= |.|-.++. |- -|.| +. ..
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L--------~~~G~~ii~P~~g~la~~~~--g~-----gr~~-~~-------~~ 172 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATL--------RSRGVEIIGPASGRLACGDV--GP-----GRMA-EP-------EE 172 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHH--------HHCCCEEECCCCccccCCCc--CC-----CCCC-CH-------HH
Confidence 446777776665 34445444444444 3469999854 44433332 22 2344 21 11
Q ss_pred eehhhhhhcC-Cc--CCceEEEecc---------------CCchhHHHHHHHHHhcCCcEEEeec
Q 017172 187 LAAAVVVNSL-PK--TTAHVLLRGT---------------VTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 187 LtaAvVln~I-P~--~t~eVfL~G~---------------~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
....|.+.+ |+ .-+.|+.||. .+ -|+|+|+|.+|.++|.+|.+++
T Consensus 173 -I~~~~~~~~~~~~l~gk~vlITgG~T~E~ID~VR~isN~SS-G~~G~aiA~~l~~~Ga~V~~v~ 235 (399)
T PRK05579 173 -IVAAAERALSPKDLAGKRVLITAGPTREPIDPVRYITNRSS-GKMGYALARAAARRGADVTLVS 235 (399)
T ss_pred -HHHHHHHHhhhcccCCCEEEEeCCCccccccceeeeccCCc-chHHHHHHHHHHHCCCEEEEeC
Confidence 122333333 22 3368999998 23 3999999999999999998854
No 189
>PRK12744 short chain dehydrogenase; Provisional
Probab=78.76 E-value=2.6 Score=38.28 Aligned_cols=29 Identities=24% Similarity=0.393 Sum_probs=26.2
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.|++||+++ =+|+++|..|.++|.+|++
T Consensus 9 k~vlItGa~~--gIG~~~a~~l~~~G~~vv~ 37 (257)
T PRK12744 9 KVVLIAGGAK--NLGGLIARDLAAQGAKAVA 37 (257)
T ss_pred cEEEEECCCc--hHHHHHHHHHHHCCCcEEE
Confidence 6799999995 7999999999999999666
No 190
>PRK07814 short chain dehydrogenase; Provisional
Probab=78.62 E-value=4.1 Score=37.34 Aligned_cols=32 Identities=16% Similarity=0.251 Sum_probs=28.1
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
-+-|++||+++ =||+++|..|.++|.+|++.+
T Consensus 10 ~~~vlItGasg--gIG~~~a~~l~~~G~~Vi~~~ 41 (263)
T PRK07814 10 DQVAVVTGAGR--GLGAAIALAFAEAGADVLIAA 41 (263)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEe
Confidence 35699999995 799999999999999998844
No 191
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=78.60 E-value=4.1 Score=37.75 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=26.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+-|++||+++.+=+|+|+|..|++.|.+|++.
T Consensus 7 k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~ 38 (260)
T PRK06997 7 KRILITGLLSNRSIAYGIAKACKREGAELAFT 38 (260)
T ss_pred cEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEE
Confidence 57899997421359999999999999999884
No 192
>PRK06484 short chain dehydrogenase; Validated
Probab=78.48 E-value=3.6 Score=41.65 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=28.6
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
-+.+++||+++ =+|+++|..|.++|.+|++.+
T Consensus 269 ~k~~lItGas~--gIG~~~a~~l~~~G~~V~~~~ 300 (520)
T PRK06484 269 PRVVAITGGAR--GIGRAVADRFAAAGDRLLIID 300 (520)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEe
Confidence 46899999995 899999999999999999954
No 193
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=78.47 E-value=2.8 Score=39.55 Aligned_cols=30 Identities=17% Similarity=0.170 Sum_probs=27.2
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+.||+||+++ =+|++++..|.++|.+|...
T Consensus 6 k~vlVtG~~G--~IG~~l~~~L~~~G~~V~~~ 35 (325)
T PLN02989 6 KVVCVTGASG--YIASWIVKLLLFRGYTINAT 35 (325)
T ss_pred CEEEEECCch--HHHHHHHHHHHHCCCEEEEE
Confidence 6799999996 89999999999999999763
No 194
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=78.45 E-value=2.7 Score=38.58 Aligned_cols=30 Identities=17% Similarity=0.350 Sum_probs=26.8
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
.|+++|+++ -+|++++..|.++|.+|..++
T Consensus 1 kilv~G~tG--~iG~~l~~~l~~~g~~v~~~~ 30 (287)
T TIGR01214 1 RILITGANG--QLGRELVQQLSPEGRVVVALT 30 (287)
T ss_pred CEEEEcCCC--HHHHHHHHHHHhcCCEEEEeC
Confidence 389999997 999999999999999998743
No 195
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=78.32 E-value=3.8 Score=36.37 Aligned_cols=29 Identities=34% Similarity=0.353 Sum_probs=26.3
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+-|++||+++ =||++++..|.++|.+|.+
T Consensus 2 ~~~lItGa~g--~iG~~l~~~l~~~g~~v~~ 30 (247)
T PRK09730 2 AIALVTGGSR--GIGRATALLLAQEGYTVAV 30 (247)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 4689999995 8999999999999999976
No 196
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=78.31 E-value=3.3 Score=36.74 Aligned_cols=32 Identities=28% Similarity=0.348 Sum_probs=27.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+.+++||+.+ =+|+++|..|+++|.+|++.+.
T Consensus 6 ~~~lItG~~g--~iG~~~a~~l~~~G~~vi~~~r 37 (253)
T PRK08217 6 KVIVITGGAQ--GLGRAMAEYLAQKGAKLALIDL 37 (253)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeC
Confidence 4689999984 8999999999999999988543
No 197
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=78.11 E-value=2.9 Score=40.46 Aligned_cols=31 Identities=13% Similarity=0.162 Sum_probs=28.1
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.||+||++| =||+.++.+|.++|.+|+.++
T Consensus 16 ~~vlVtGatG--fiG~~lv~~L~~~g~~V~~~d 46 (348)
T PRK15181 16 KRWLITGVAG--FIGSGLLEELLFLNQTVIGLD 46 (348)
T ss_pred CEEEEECCcc--HHHHHHHHHHHHCCCEEEEEe
Confidence 6799999997 899999999999999998743
No 198
>PRK08219 short chain dehydrogenase; Provisional
Probab=78.07 E-value=3.7 Score=35.93 Aligned_cols=30 Identities=17% Similarity=0.193 Sum_probs=26.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ -+|+++|..|+++ .+|..++
T Consensus 4 ~~vlVtG~~g--~iG~~l~~~l~~~-~~V~~~~ 33 (227)
T PRK08219 4 PTALITGASR--GIGAAIARELAPT-HTLLLGG 33 (227)
T ss_pred CEEEEecCCc--HHHHHHHHHHHhh-CCEEEEe
Confidence 5799999996 9999999999999 9998854
No 199
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=77.98 E-value=2.5 Score=38.75 Aligned_cols=30 Identities=10% Similarity=0.158 Sum_probs=26.1
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCC--cEEEeec
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMG--IKVATIC 233 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rg--v~V~m~s 233 (376)
.||+||+++ .+|++++..|.++| ++|+..+
T Consensus 1 ~ilItGatG--~iG~~l~~~l~~~~~~~~v~~~~ 32 (317)
T TIGR01181 1 RILVTGGAG--FIGSNFVRYILNEHPDAEVIVLD 32 (317)
T ss_pred CEEEEcCCc--hHHHHHHHHHHHhCCCCEEEEec
Confidence 389999996 99999999999987 8888754
No 200
>PRK12367 short chain dehydrogenase; Provisional
Probab=77.81 E-value=3 Score=38.93 Aligned_cols=32 Identities=16% Similarity=0.282 Sum_probs=28.3
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+.|++||+++ =+|+++|..|.++|.+|++.+.
T Consensus 15 k~~lITGas~--gIG~ala~~l~~~G~~Vi~~~r 46 (245)
T PRK12367 15 KRIGITGASG--ALGKALTKAFRAKGAKVIGLTH 46 (245)
T ss_pred CEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEEC
Confidence 6799999994 8999999999999999988443
No 201
>PRK07831 short chain dehydrogenase; Provisional
Probab=77.70 E-value=4.2 Score=37.02 Aligned_cols=31 Identities=19% Similarity=0.234 Sum_probs=27.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+.|++||+++ +=||+++|..|+++|.+|++.
T Consensus 18 k~vlItG~sg-~gIG~~ia~~l~~~G~~V~~~ 48 (262)
T PRK07831 18 KVVLVTAAAG-TGIGSATARRALEEGARVVIS 48 (262)
T ss_pred CEEEEECCCc-ccHHHHHHHHHHHcCCEEEEE
Confidence 6799999984 249999999999999999984
No 202
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=77.65 E-value=4.4 Score=37.43 Aligned_cols=32 Identities=22% Similarity=0.293 Sum_probs=26.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
|-+++||+++.+=+|+|||..|+++|.+|++.
T Consensus 8 k~~lItGa~~s~GIG~aia~~la~~G~~v~~~ 39 (257)
T PRK08594 8 KTYVVMGVANKRSIAWGIARSLHNAGAKLVFT 39 (257)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEe
Confidence 57899998610259999999999999999984
No 203
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=77.65 E-value=3 Score=38.48 Aligned_cols=32 Identities=19% Similarity=0.322 Sum_probs=26.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+-|+.||+++.+=+|++||..|+++|.+|.+.
T Consensus 7 k~~lItGas~~~GIG~aia~~la~~G~~v~~~ 38 (258)
T PRK07370 7 KKALVTGIANNRSIAWGIAQQLHAAGAELGIT 38 (258)
T ss_pred cEEEEeCCCCCCchHHHHHHHHHHCCCEEEEE
Confidence 67899998621369999999999999999873
No 204
>PRK07904 short chain dehydrogenase; Provisional
Probab=77.34 E-value=3.1 Score=38.33 Aligned_cols=31 Identities=16% Similarity=0.274 Sum_probs=26.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCC-cEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMG-IKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rg-v~V~m~s 233 (376)
+-|++||+++ -+|+++|..|.++| .+|++..
T Consensus 9 ~~vlItGas~--giG~~la~~l~~~gg~~V~~~~ 40 (253)
T PRK07904 9 QTILLLGGTS--EIGLAICERYLKNAPARVVLAA 40 (253)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHhcCCCeEEEEe
Confidence 4689999995 99999999999995 9998843
No 205
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=77.34 E-value=3.7 Score=37.71 Aligned_cols=30 Identities=20% Similarity=0.405 Sum_probs=26.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
..|++||+++ =+|++||..|+++|.+|++.
T Consensus 2 ~~~lITGas~--gIG~~~a~~l~~~G~~V~~~ 31 (267)
T TIGR02685 2 PAAVVTGAAK--RIGSSIAVALHQEGYRVVLH 31 (267)
T ss_pred CEEEEeCCCC--cHHHHHHHHHHhCCCeEEEE
Confidence 4689999995 69999999999999999984
No 206
>PRK09242 tropinone reductase; Provisional
Probab=77.28 E-value=4.7 Score=36.49 Aligned_cols=31 Identities=19% Similarity=0.364 Sum_probs=27.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
|.+++||+++ =||+++|..|+++|.+|++++
T Consensus 10 k~~lItGa~~--gIG~~~a~~l~~~G~~v~~~~ 40 (257)
T PRK09242 10 QTALITGASK--GIGLAIAREFLGLGADVLIVA 40 (257)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEe
Confidence 6799999995 799999999999999999853
No 207
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=76.97 E-value=4.5 Score=35.78 Aligned_cols=32 Identities=25% Similarity=0.454 Sum_probs=27.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
|-+++||+++ =||+++|..|.++|.+|+++..
T Consensus 1 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r 32 (242)
T TIGR01829 1 RIALVTGGMG--GIGTAICQRLAKDGYRVAANCG 32 (242)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeC
Confidence 4579999995 8999999999999999988443
No 208
>PRK06172 short chain dehydrogenase; Provisional
Probab=76.91 E-value=4.8 Score=36.23 Aligned_cols=31 Identities=23% Similarity=0.288 Sum_probs=27.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+-|++||+++ =+|++||..|+++|.+|++++
T Consensus 8 k~ilItGas~--~iG~~ia~~l~~~G~~v~~~~ 38 (253)
T PRK06172 8 KVALVTGGAA--GIGRATALAFAREGAKVVVAD 38 (253)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEe
Confidence 6799999995 799999999999999999854
No 209
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=76.78 E-value=3.2 Score=37.93 Aligned_cols=32 Identities=13% Similarity=0.270 Sum_probs=27.2
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+-|++||+++++=+|+++|..|.++|.+|++.
T Consensus 7 k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~ 38 (256)
T PRK12859 7 KVAVVTGVSRLDGIGAAICKELAEAGADIFFT 38 (256)
T ss_pred cEEEEECCCCCCChHHHHHHHHHHCCCeEEEE
Confidence 67999999831249999999999999999884
No 210
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=76.78 E-value=3.2 Score=39.94 Aligned_cols=31 Identities=19% Similarity=0.197 Sum_probs=28.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.||+||+++ =+|+++|..|.++|.+|+.++
T Consensus 5 k~ilItGatG--~IG~~l~~~L~~~G~~V~~~~ 35 (349)
T TIGR02622 5 KKVLVTGHTG--FKGSWLSLWLLELGAEVYGYS 35 (349)
T ss_pred CEEEEECCCC--hhHHHHHHHHHHCCCEEEEEe
Confidence 6799999996 799999999999999998754
No 211
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=76.74 E-value=4.9 Score=38.28 Aligned_cols=31 Identities=19% Similarity=0.281 Sum_probs=27.8
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
-+-+++||+++ =||+++|..|+++|.+|++.
T Consensus 12 ~k~~lVTGas~--gIG~~ia~~L~~~Ga~Vv~~ 42 (306)
T PRK07792 12 GKVAVVTGAAA--GLGRAEALGLARLGATVVVN 42 (306)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEe
Confidence 36799999995 79999999999999999984
No 212
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=76.59 E-value=3.1 Score=38.39 Aligned_cols=33 Identities=15% Similarity=0.127 Sum_probs=27.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
|-+++||+++++=+|+|+|..|.++|.+|++..
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~ 41 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTY 41 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEe
Confidence 568999998311399999999999999999843
No 213
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=76.55 E-value=2.9 Score=39.91 Aligned_cols=29 Identities=10% Similarity=0.184 Sum_probs=25.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.||+||+++ =||++++..|+++|.+|+.
T Consensus 2 ~~vlVtGatG--fIG~~l~~~L~~~g~~~v~ 30 (355)
T PRK10217 2 RKILITGGAG--FIGSALVRYIINETSDAVV 30 (355)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHHcCCCEEE
Confidence 5799999996 8999999999999987554
No 214
>PRK07041 short chain dehydrogenase; Provisional
Probab=76.52 E-value=3.5 Score=36.44 Aligned_cols=29 Identities=21% Similarity=0.358 Sum_probs=25.3
Q ss_pred EEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 204 LLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 204 fL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
++||+++ -+|+++|..|+++|.+|++..+
T Consensus 1 lItGas~--~iG~~~a~~l~~~G~~v~~~~r 29 (230)
T PRK07041 1 LVVGGSS--GIGLALARAFAAEGARVTIASR 29 (230)
T ss_pred CeecCCC--hHHHHHHHHHHHCCCEEEEEeC
Confidence 4789995 8999999999999999988543
No 215
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=76.38 E-value=3.8 Score=36.78 Aligned_cols=31 Identities=23% Similarity=0.414 Sum_probs=27.6
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
..+.|++||++ +=+|+++|..|.++|.+|++
T Consensus 4 ~~~~ilITGas--~GiG~aia~~l~~~G~~v~~ 34 (251)
T COG1028 4 SGKVALVTGAS--SGIGRAIARALAREGARVVV 34 (251)
T ss_pred CCCEEEEeCCC--CHHHHHHHHHHHHCCCeEEE
Confidence 35679999999 48999999999999999777
No 216
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=76.33 E-value=3.5 Score=36.72 Aligned_cols=29 Identities=17% Similarity=0.237 Sum_probs=24.4
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCC--cEEEe
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT 231 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rg--v~V~m 231 (376)
+.|++||+++ -||++||.+|+++| ++|..
T Consensus 1 ~~vlItGas~--gIG~~ia~~l~~~~~~~~v~~ 31 (235)
T PRK09009 1 MNILIVGGSG--GIGKAMVKQLLERYPDATVHA 31 (235)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHhCCCCEEEE
Confidence 3689999995 99999999999984 66654
No 217
>PRK08278 short chain dehydrogenase; Provisional
Probab=76.26 E-value=3.7 Score=38.08 Aligned_cols=31 Identities=13% Similarity=0.254 Sum_probs=27.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+-+++||+++ =+|++||..|+++|.+|++++
T Consensus 7 k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~ 37 (273)
T PRK08278 7 KTLFITGASR--GIGLAIALRAARDGANIVIAA 37 (273)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCEEEEEe
Confidence 5789999995 799999999999999999854
No 218
>PRK06198 short chain dehydrogenase; Provisional
Probab=76.21 E-value=3.4 Score=37.25 Aligned_cols=31 Identities=16% Similarity=0.266 Sum_probs=27.2
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcE-EEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIK-VATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~-V~m~s 233 (376)
+.|++||+++ =||+++|..|+++|.+ |.+++
T Consensus 7 k~vlItGa~g--~iG~~la~~l~~~G~~~V~~~~ 38 (260)
T PRK06198 7 KVALVTGGTQ--GLGAAIARAFAERGAAGLVICG 38 (260)
T ss_pred cEEEEeCCCc--hHHHHHHHHHHHCCCCeEEEEc
Confidence 5689999995 7999999999999999 77744
No 219
>PRK07340 ornithine cyclodeaminase; Validated
Probab=76.17 E-value=11 Score=36.86 Aligned_cols=84 Identities=17% Similarity=0.204 Sum_probs=59.1
Q ss_pred hcCCeEEeecccccccccccccceeeeccC-CCccEEEEcCCceeh-------hhhhhcC-CcCCceEEEeccCCchhHH
Q 017172 145 AKGVKVISLGLLNQGEELNRNGEIYLERQP-NKLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 215 (376)
Q Consensus 145 ~~GvKVlSLGlLNq~e~LN~~G~l~v~k~P-~~LrvrVVdGstLta-------AvVln~I-P~~t~eVfL~G~~~~sKv~ 215 (376)
-.|+|+++.--=|..+.|...--+++--.| +..-.=++||+.||+ |+-.+-+ +++.+.|.+.|+. ..|
T Consensus 61 ~~g~K~~~~~p~N~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaA~sala~~~La~~~~~~v~IiGaG---~qa 137 (304)
T PRK07340 61 LAITKLVTVCPGNAARGLPTIQGEVVVADAATGERLFLLDGPTVTGRRTAAVSLLAARTLAPAPPGDLLLIGTG---VQA 137 (304)
T ss_pred ccEEEEEEeCCCCccCCCCcceEEEEEEECCCCcEEEEEcChhHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HHH
Confidence 468999987655655554433333443344 356677899999974 4444555 6789999999998 899
Q ss_pred HHHHHHHhc-CCcE-EEe
Q 017172 216 NAVASSLCQ-MGIK-VAT 231 (376)
Q Consensus 216 ~AiA~~LC~-rgv~-V~m 231 (376)
++.+.+||. ++++ |.+
T Consensus 138 ~~~~~al~~~~~~~~v~v 155 (304)
T PRK07340 138 RAHLEAFAAGLPVRRVWV 155 (304)
T ss_pred HHHHHHHHHhCCCCEEEE
Confidence 999999995 6754 555
No 220
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=76.16 E-value=4.9 Score=34.50 Aligned_cols=42 Identities=29% Similarity=0.396 Sum_probs=32.3
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcE-EEeech--hHHHHHhhc
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIK-VATICK--DDYEKLKLR 243 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~-V~m~s~--~~~~~l~~~ 243 (376)
..+.|++.|+. ..||+++.+|.++|++ |.+.++ ++-+.|.++
T Consensus 11 ~~~~vlviGaG---g~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~ 55 (135)
T PF01488_consen 11 KGKRVLVIGAG---GAARAVAAALAALGAKEITIVNRTPERAEALAEE 55 (135)
T ss_dssp TTSEEEEESSS---HHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEECCH---HHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHH
Confidence 45789999997 7999999999999999 777443 344445444
No 221
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=75.83 E-value=5.3 Score=37.43 Aligned_cols=33 Identities=18% Similarity=0.216 Sum_probs=27.3
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
|.|++||+++.+=+|+|||..|.++|.+|++..
T Consensus 11 k~~lItGas~~~GIG~aia~~la~~G~~V~l~~ 43 (272)
T PRK08159 11 KRGLILGVANNRSIAWGIAKACRAAGAELAFTY 43 (272)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEc
Confidence 679999996213599999999999999998843
No 222
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=75.79 E-value=3 Score=39.20 Aligned_cols=29 Identities=7% Similarity=0.229 Sum_probs=23.4
Q ss_pred EEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 204 LLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 204 fL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
|+|... .+++|+|||.+|.++|.+|.+.+
T Consensus 18 ~itN~S-SGgIG~AIA~~la~~Ga~Vvlv~ 46 (227)
T TIGR02114 18 SITNHS-TGHLGKIITETFLSAGHEVTLVT 46 (227)
T ss_pred eecCCc-ccHHHHHHHHHHHHCCCEEEEEc
Confidence 344443 37999999999999999999865
No 223
>PLN02206 UDP-glucuronate decarboxylase
Probab=75.35 E-value=3.9 Score=41.97 Aligned_cols=31 Identities=19% Similarity=0.219 Sum_probs=28.3
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.||+||+++ =||+.++.+|.++|.+|+.++
T Consensus 120 ~kILVTGatG--fIGs~Lv~~Ll~~G~~V~~ld 150 (442)
T PLN02206 120 LRVVVTGGAG--FVGSHLVDRLMARGDSVIVVD 150 (442)
T ss_pred CEEEEECccc--HHHHHHHHHHHHCcCEEEEEe
Confidence 5799999997 999999999999999999853
No 224
>PLN02778 3,5-epimerase/4-reductase
Probab=75.23 E-value=4.5 Score=38.75 Aligned_cols=35 Identities=14% Similarity=0.158 Sum_probs=29.7
Q ss_pred cCCc-CCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 195 SLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 195 ~IP~-~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+-|. .++.|++||++| =||+.++.+|.++|.+|..
T Consensus 3 ~~~~~~~~kiLVtG~tG--fiG~~l~~~L~~~g~~V~~ 38 (298)
T PLN02778 3 GTAGSATLKFLIYGKTG--WIGGLLGKLCQEQGIDFHY 38 (298)
T ss_pred CCCCCCCCeEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence 4454 345799999997 8999999999999999975
No 225
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=75.17 E-value=3.4 Score=39.37 Aligned_cols=30 Identities=20% Similarity=0.232 Sum_probs=27.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+.||+||+++ =||++++..|.++|.+|..+
T Consensus 7 ~~vlVTGatG--fiG~~l~~~L~~~G~~V~~~ 36 (340)
T PLN02653 7 KVALITGITG--QDGSYLTEFLLSKGYEVHGI 36 (340)
T ss_pred CEEEEECCCC--ccHHHHHHHHHHCCCEEEEE
Confidence 5799999996 89999999999999999874
No 226
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=75.03 E-value=7.2 Score=38.34 Aligned_cols=141 Identities=20% Similarity=0.122 Sum_probs=74.3
Q ss_pred HhcCCeEEeecccccccccccccceeeeccC-CCccEEEEcCCceeh-------hhhhhcC-CcCCceEEEeccCCchhH
Q 017172 144 DAKGVKVISLGLLNQGEELNRNGEIYLERQP-NKLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKV 214 (376)
Q Consensus 144 d~~GvKVlSLGlLNq~e~LN~~G~l~v~k~P-~~LrvrVVdGstLta-------AvVln~I-P~~t~eVfL~G~~~~sKv 214 (376)
+-.|+|++|.--=|....|...--+++--.| ...=+=|+||+.||+ |+...-+ |++.+.+.+.|+. ..
T Consensus 63 ~~~gvK~v~~~p~N~~~glP~~~g~i~L~D~~TG~p~ai~dg~~lT~~RTaA~sala~~~La~~~~~~l~viGaG---~Q 139 (313)
T PF02423_consen 63 PVAGVKWVSVFPGNPKRGLPSIQGVILLFDPETGEPLAIMDGTWLTALRTAAVSALAARYLARPDARTLGVIGAG---VQ 139 (313)
T ss_dssp TEEEEEEEEEETTCGGGTSSSEEEEEEEEETTT--EEEEEESHHHHHHHHHHHHHHHHHHHS-TT--EEEEE--S---HH
T ss_pred cEEEEEEEEecCCccccCCCceeEEEEEEECCCCCEEEEecccchhhhHHHHHHHHHHHHhCcCCCceEEEECCC---HH
Confidence 3689999998877877777543333343333 244466999999974 3333333 7899999999998 89
Q ss_pred HHHHHHHHhc-CCcEEEe---echhHHHHHhhcCchhhccceeeecccccC--cceEEEEcCCCCHHHh-------hcCC
Q 017172 215 ANAVASSLCQ-MGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAAH--KTKIWLVGDDLTGKEQ-------ARAP 281 (376)
Q Consensus 215 ~~AiA~~LC~-rgv~V~m---~s~~~~~~l~~~~p~~~~~~Lv~~t~y~a~--~~K~WlVG~~l~~~eQ-------~~Ap 281 (376)
|+.-+.+|++ ++++-+. -+.++-+++..++.. ..-.+..+.+-+++ .+-+ |+ -.|+..+ .|.+
T Consensus 140 A~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~-~~~~v~~~~~~~~av~~aDi-i~--taT~s~~~~P~~~~~~l~ 215 (313)
T PF02423_consen 140 ARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRD-LGVPVVAVDSAEEAVRGADI-IV--TATPSTTPAPVFDAEWLK 215 (313)
T ss_dssp HHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHC-CCTCEEEESSHHHHHTTSSE-EE--E----SSEEESB-GGGS-
T ss_pred HHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhcc-ccccceeccchhhhcccCCE-EE--EccCCCCCCccccHHHcC
Confidence 9999999984 5565444 344445555555333 21122233343332 2222 22 1333333 5778
Q ss_pred CCceeeeccc
Q 017172 282 KGTIFIPYTQ 291 (376)
Q Consensus 282 ~Gt~Fipfsq 291 (376)
+|+|.....-
T Consensus 216 ~g~hi~~iGs 225 (313)
T PF02423_consen 216 PGTHINAIGS 225 (313)
T ss_dssp TT-EEEE-S-
T ss_pred CCcEEEEecC
Confidence 8998887663
No 227
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=74.91 E-value=4.9 Score=36.48 Aligned_cols=33 Identities=24% Similarity=0.318 Sum_probs=27.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++.+=+|+++|..|.++|.+|++.+
T Consensus 6 k~vlItGas~~~giG~~la~~l~~~G~~vi~~~ 38 (256)
T PRK12748 6 KIALVTGASRLNGIGAAVCRRLAAKGIDIFFTY 38 (256)
T ss_pred cEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEc
Confidence 679999998312499999999999999999854
No 228
>PRK06123 short chain dehydrogenase; Provisional
Probab=74.86 E-value=5.4 Score=35.61 Aligned_cols=29 Identities=17% Similarity=0.241 Sum_probs=26.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+-+++||+++ =||.++|..|+++|..|++
T Consensus 3 ~~~lVtG~~~--~iG~~~a~~l~~~G~~vv~ 31 (248)
T PRK06123 3 KVMIITGASR--GIGAATALLAAERGYAVCL 31 (248)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCeEEE
Confidence 3589999995 8999999999999999887
No 229
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=74.83 E-value=5.6 Score=37.48 Aligned_cols=32 Identities=19% Similarity=0.289 Sum_probs=27.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
|-|++||+++.+=+|+|+|..|.++|.+|++.
T Consensus 6 k~~lItGas~~~GIG~aiA~~la~~G~~Vil~ 37 (274)
T PRK08415 6 KKGLIVGVANNKSIAYGIAKACFEQGAELAFT 37 (274)
T ss_pred cEEEEECCCCCCCHHHHHHHHHHHCCCEEEEE
Confidence 67899998621249999999999999999984
No 230
>PRK07201 short chain dehydrogenase; Provisional
Probab=74.17 E-value=5.2 Score=41.64 Aligned_cols=31 Identities=23% Similarity=0.365 Sum_probs=28.1
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|++||+++ -+|+++|..|+++|.+|++.+
T Consensus 372 k~vlItGas~--giG~~la~~l~~~G~~V~~~~ 402 (657)
T PRK07201 372 KVVLITGASS--GIGRATAIKVAEAGATVFLVA 402 (657)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEE
Confidence 5799999995 999999999999999999844
No 231
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=73.93 E-value=4.1 Score=38.99 Aligned_cols=30 Identities=20% Similarity=0.253 Sum_probs=27.3
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+.||+||+++ =||++++..|.++|.+|+.+
T Consensus 1 ~~vlVTGatG--fIG~~l~~~L~~~G~~V~~~ 30 (343)
T TIGR01472 1 KIALITGITG--QDGSYLAEFLLEKGYEVHGL 30 (343)
T ss_pred CeEEEEcCCC--cHHHHHHHHHHHCCCEEEEE
Confidence 4689999996 79999999999999999984
No 232
>PF01695 IstB_IS21: IstB-like ATP binding protein; InterPro: IPR002611 Proteins in this entry contain an ATP/GTP binding P-loop motif. They are found associated with IS21 family insertion sequences []. Functionally they have not been characterised, but they may be involved in transposition [].; GO: 0005524 ATP binding; PDB: 3EC2_A 3ECC_A 2W58_A 2QGZ_A.
Probab=73.89 E-value=5.4 Score=36.09 Aligned_cols=43 Identities=26% Similarity=0.318 Sum_probs=31.1
Q ss_pred ceEEEeccCCchh--HHHHHHHHHhcCCcEEEe-echhHHHHHhhc
Q 017172 201 AHVLLRGTVTANK--VANAVASSLCQMGIKVAT-ICKDDYEKLKLR 243 (376)
Q Consensus 201 ~eVfL~G~~~~sK--v~~AiA~~LC~rgv~V~m-~s~~~~~~l~~~ 243 (376)
+-++|.|.+|.=| +|.|||..+|++|++|.. ...+-++.|+..
T Consensus 48 ~~l~l~G~~G~GKThLa~ai~~~~~~~g~~v~f~~~~~L~~~l~~~ 93 (178)
T PF01695_consen 48 ENLILYGPPGTGKTHLAVAIANEAIRKGYSVLFITASDLLDELKQS 93 (178)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEHHHHHHHHHCC
T ss_pred eEEEEEhhHhHHHHHHHHHHHHHhccCCcceeEeecCceecccccc
Confidence 4578887765444 999999999999999998 455677777765
No 233
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=73.69 E-value=4.4 Score=39.02 Aligned_cols=31 Identities=19% Similarity=0.205 Sum_probs=26.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCC--cEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMG--IKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rg--v~V~m~s 233 (376)
+.|++||+++ -+|++++..|+++| .+|.+++
T Consensus 5 k~vLVTGatG--~IG~~l~~~L~~~g~~~~V~~~~ 37 (324)
T TIGR03589 5 KSILITGGTG--SFGKAFISRLLENYNPKKIIIYS 37 (324)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHhCCCcEEEEEc
Confidence 5799999996 99999999999986 6888744
No 234
>PLN02572 UDP-sulfoquinovose synthase
Probab=73.62 E-value=4 Score=41.70 Aligned_cols=30 Identities=27% Similarity=0.267 Sum_probs=27.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+.||+||+++ =||+.|+.+|.++|.+|+.+
T Consensus 48 k~VLVTGatG--fIGs~Lv~~L~~~G~~V~~~ 77 (442)
T PLN02572 48 KKVMVIGGDG--YCGWATALHLSKRGYEVAIV 77 (442)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCeEEEE
Confidence 4799999996 99999999999999999984
No 235
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=73.37 E-value=5.1 Score=40.10 Aligned_cols=38 Identities=26% Similarity=0.272 Sum_probs=30.9
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeechhHHHHH
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKL 240 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~~~~l 240 (376)
-+.|+++|.. ++|.++|.+|.++|.+|.+++.+..+.+
T Consensus 5 ~k~v~iiG~g---~~G~~~A~~l~~~G~~V~~~d~~~~~~~ 42 (450)
T PRK14106 5 GKKVLVVGAG---VSGLALAKFLKKLGAKVILTDEKEEDQL 42 (450)
T ss_pred CCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCchHHH
Confidence 3679999988 7999999999999999999655443333
No 236
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=73.05 E-value=4 Score=38.47 Aligned_cols=29 Identities=14% Similarity=0.251 Sum_probs=24.2
Q ss_pred EEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 204 LLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 204 fL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
|+|+..| -++|+++|.+|+++|.+|+.++
T Consensus 19 ~itN~SS-G~iG~aLA~~L~~~G~~V~li~ 47 (229)
T PRK06732 19 GITNHST-GQLGKIIAETFLAAGHEVTLVT 47 (229)
T ss_pred eecCccc-hHHHHHHHHHHHhCCCEEEEEE
Confidence 5665555 4999999999999999999854
No 237
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=72.75 E-value=4.5 Score=39.42 Aligned_cols=34 Identities=15% Similarity=0.168 Sum_probs=27.8
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
.-|-++.||+.+.+=+|+|+|..|.++|.+|++.
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~ 40 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVG 40 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEE
Confidence 3467899999511469999999999999999993
No 238
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=72.69 E-value=6.5 Score=37.69 Aligned_cols=31 Identities=23% Similarity=0.410 Sum_probs=27.2
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCC-cEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMG-IKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rg-v~V~m~s 233 (376)
+-|++||+++ =+|+++|..|+++| .+|++.+
T Consensus 4 k~vlITGas~--GIG~aia~~L~~~G~~~V~l~~ 35 (314)
T TIGR01289 4 PTVIITGASS--GLGLYAAKALAATGEWHVIMAC 35 (314)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHcCCCEEEEEe
Confidence 4689999994 79999999999999 9998843
No 239
>PLN00016 RNA-binding protein; Provisional
Probab=72.64 E-value=4.2 Score=39.95 Aligned_cols=34 Identities=21% Similarity=0.236 Sum_probs=30.0
Q ss_pred cCCceEEEe----ccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 198 KTTAHVLLR----GTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 198 ~~t~eVfL~----G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
...+.|++| |+++ -||+.++..|.++|.+|..++
T Consensus 50 ~~~~~VLVt~~~~GatG--~iG~~lv~~L~~~G~~V~~l~ 87 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHA--FIGFYLAKELVKAGHEVTLFT 87 (378)
T ss_pred cccceEEEEeccCCCce--eEhHHHHHHHHHCCCEEEEEe
Confidence 345689999 9997 999999999999999999854
No 240
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=72.35 E-value=7.5 Score=35.37 Aligned_cols=45 Identities=13% Similarity=0.137 Sum_probs=34.8
Q ss_pred ceehhhhhhcCCc--CCceEEEeccCCchh-HHHHHHHHHhcCCcEEEeec
Q 017172 186 SLAAAVVVNSLPK--TTAHVLLRGTVTANK-VANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 186 tLtaAvVln~IP~--~t~eVfL~G~~~~sK-v~~AiA~~LC~rgv~V~m~s 233 (376)
..++.-.+.+++. .-+.|++.|+. + +|..+|.+|.++|.+|.+.+
T Consensus 28 ~~a~v~l~~~~~~~l~gk~vlViG~G---~~~G~~~a~~L~~~g~~V~v~~ 75 (168)
T cd01080 28 PAGILELLKRYGIDLAGKKVVVVGRS---NIVGKPLAALLLNRNATVTVCH 75 (168)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEECCc---HHHHHHHHHHHhhCCCEEEEEE
Confidence 3444445667764 55899999998 7 59999999999999988844
No 241
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=71.63 E-value=4.3 Score=38.51 Aligned_cols=71 Identities=21% Similarity=0.311 Sum_probs=55.5
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeechhHHHHHhhcCchhhccceee-ecccccC--cceEEEEcC
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVL-STSYAAH--KTKIWLVGD 270 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~~~~l~~~~p~~~~~~Lv~-~t~y~a~--~~K~WlVG~ 270 (376)
+|=-||+.|..+=.-+...||.+|.++|+-|+=++.-+|=- +++-|++...-|-. ...|++. ..|+-|||=
T Consensus 2 Dt~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw-~~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGY 75 (192)
T PF06057_consen 2 DTLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFW-SERTPEQTAADLARIIRHYRARWGRKRVVLIGY 75 (192)
T ss_pred CEEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHh-hhCCHHHHHHHHHHHHHHHHHHhCCceEEEEee
Confidence 34458999998877899999999999999999977777755 34468888887774 4478765 448899984
No 242
>PF01661 Macro: Macro domain; InterPro: IPR002589 The Macro or A1pp domain is a module of about 180 amino acids which can bind ADP-ribose, an NAD metabolite or related ligands. Binding to ADP-ribose could be either covalent or non-covalent []: in certain cases it is believed to bind non-covalently []; while in other cases (such as Aprataxin) it appears to bind both non-covalently through a zinc finger motif, and covalently through a separate region of the protein []. The domain was described originally in association with ADP-ribose 1''-phosphate (Appr-1''-P) processing activity (A1pp) of the yeast YBR022W protein []. The domain is also called Macro domain as it is the C-terminal domain of mammalian core histone macro-H2A [, ]. Macro domain proteins can be found in eukaryotes, in (mostly pathogenic) bacteria, in archaea and in ssRNA viruses, such as coronaviruses, Rubella and Hepatitis E viruses. In vertebrates the domain occurs e.g. in histone macroH2A, in predicted poly-ADP-ribose polymerases (PARPs) and in B aggressive lymphoma (BAL) protein. The macro domain can be associated with catalytic domains, such as PARP, or sirtuin. The Macro domain can recognise ADP-ribose or in some cases poly-ADP-ribose, which can be involved in ADP-ribosylation reactions that occur in important processes, such as chromatin biology, DNA repair and transcription regulation []. The human macroH2A1.1 Macro domain binds an NAD metabolite O-acetyl-ADP-ribose []. The Macro domain has been suggested to play a regulatory role in ADP-ribosylation, which is involved in inter- and intracellular signaling, transcriptional regulation, DNA repair pathways and maintenance of genomic stability, telomere dynamics, cell differentiation and proliferation, and necrosis and apoptosis. The 3D structure of the Macro domain has a mixed alpha/beta fold of a mixed beta sheet sandwiched between four helices. Several Macro domain only domains are shorter than the structure of AF1521 and lack either the first strand or the C-terminal helix 5. Well conserved residues form a hydrophobic cleft and cluster around the AF1521-ADP-ribose binding site [, , , ]. ; PDB: 2DX6_A 2XD7_D 3Q71_A 2FAV_B 1SPV_A 3EKE_A 3EJF_A 1YD9_B 3GPG_B 3GPQ_A ....
Probab=71.22 E-value=25 Score=28.27 Aligned_cols=62 Identities=23% Similarity=0.276 Sum_probs=45.8
Q ss_pred cceEEEeecccCceeceeEEeeccCceeccchhhhHHHHHHHHHHHHHHhcCCeEEeeccccc
Q 017172 96 GRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQ 158 (376)
Q Consensus 96 ~~~Fv~e~~~l~kl~~qtWviPRy~fqY~l~~~~~~IN~lIE~AIl~Ad~~GvKVlSLGlLNq 158 (376)
|+..+.+.+.+.--..=..+.|+|.-+ .-+...+.+.+-+++++..|+++++|.|.+=+|.-
T Consensus 43 G~~~~t~~~~l~~~~Iih~v~P~~~~~-~~~~~~~~L~~~~~~~l~~a~~~~~~sIa~P~ig~ 104 (118)
T PF01661_consen 43 GEVIVTPGGNLPCKYIIHAVGPTYNSP-GEKNSYEALESAYRNALQKAEENGIKSIAFPAIGT 104 (118)
T ss_dssp TSEEEEEETTSSSSEEEEEEEEETTTS-TSTTHHHHHHHHHHHHHHHHHHTTTSEEEEESTTS
T ss_pred CCeeeecCCCccccceEEEecceeccc-cccccHHHHHHHHHHHHHHHHHcCCcccccCcccC
Confidence 556777777765222233355888765 56678889999999999999999999998876653
No 243
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=71.12 E-value=9.4 Score=30.79 Aligned_cols=38 Identities=26% Similarity=0.388 Sum_probs=28.9
Q ss_pred EEEeccCCchhHHHHHHHHHhcCCcEEEee--chhHHHHHhhc
Q 017172 203 VLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKLR 243 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rgv~V~m~--s~~~~~~l~~~ 243 (376)
|++.|.. .+|+.|+..|-+++++|+++ +++..++++.+
T Consensus 1 vvI~G~g---~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~ 40 (116)
T PF02254_consen 1 VVIIGYG---RIGREIAEQLKEGGIDVVVIDRDPERVEELREE 40 (116)
T ss_dssp EEEES-S---HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT
T ss_pred eEEEcCC---HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc
Confidence 5778887 89999999999999888884 44456666554
No 244
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=70.89 E-value=5.1 Score=38.03 Aligned_cols=27 Identities=22% Similarity=0.434 Sum_probs=24.4
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
.||+||++| -||++++.+|.++| +|..
T Consensus 2 ~iLVtG~~G--fiGs~l~~~L~~~g-~V~~ 28 (299)
T PRK09987 2 NILLFGKTG--QVGWELQRALAPLG-NLIA 28 (299)
T ss_pred eEEEECCCC--HHHHHHHHHhhccC-CEEE
Confidence 599999997 99999999999999 6765
No 245
>PRK06484 short chain dehydrogenase; Validated
Probab=70.84 E-value=6.9 Score=39.63 Aligned_cols=42 Identities=14% Similarity=0.184 Sum_probs=32.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee--chhHHHHHhhcC
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKLRI 244 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~--s~~~~~~l~~~~ 244 (376)
+-|++||+++ =+|+++|..|.++|.+|++. +.++.+.+.++.
T Consensus 6 k~~lITGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (520)
T PRK06484 6 RVVLVTGAAG--GIGRAACQRFARAGDQVVVADRNVERARERADSL 49 (520)
T ss_pred eEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 5789999995 79999999999999999884 344555554443
No 246
>PLN02427 UDP-apiose/xylose synthase
Probab=70.49 E-value=6.8 Score=38.33 Aligned_cols=35 Identities=14% Similarity=0.144 Sum_probs=29.6
Q ss_pred CcCCceEEEeccCCchhHHHHHHHHHhcC-CcEEEeec
Q 017172 197 PKTTAHVLLRGTVTANKVANAVASSLCQM-GIKVATIC 233 (376)
Q Consensus 197 P~~t~eVfL~G~~~~sKv~~AiA~~LC~r-gv~V~m~s 233 (376)
|-..+.||+||+++ =||+.++..|.++ |.+|+.++
T Consensus 11 ~~~~~~VlVTGgtG--fIGs~lv~~L~~~~g~~V~~l~ 46 (386)
T PLN02427 11 PIKPLTICMIGAGG--FIGSHLCEKLMTETPHKVLALD 46 (386)
T ss_pred cccCcEEEEECCcc--hHHHHHHHHHHhcCCCEEEEEe
Confidence 44556799999997 8999999999998 58988754
No 247
>PRK07775 short chain dehydrogenase; Provisional
Probab=70.44 E-value=8.6 Score=35.62 Aligned_cols=30 Identities=27% Similarity=0.305 Sum_probs=26.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+-|++||+++ =||+++|..|.++|.+|.+.
T Consensus 11 ~~vlVtGa~g--~iG~~la~~L~~~G~~V~~~ 40 (274)
T PRK07775 11 RPALVAGASS--GIGAATAIELAAAGFPVALG 40 (274)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCEEEEE
Confidence 5699999995 89999999999999999874
No 248
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=70.41 E-value=6 Score=32.22 Aligned_cols=30 Identities=17% Similarity=0.280 Sum_probs=25.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCc-EEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGI-KVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv-~V~m~ 232 (376)
+.|+++|+++ =+|.++|..|+++|. .|++.
T Consensus 1 ~~~li~Ga~~--~iG~~~~~~l~~~g~~~v~~~ 31 (180)
T smart00822 1 GTYLITGGLG--GLGLELARWLAERGARHLVLL 31 (180)
T ss_pred CEEEEEcCCC--hHHHHHHHHHHHhhCCeEEEE
Confidence 3589999995 899999999999997 56653
No 249
>PRK06720 hypothetical protein; Provisional
Probab=69.76 E-value=9.1 Score=34.32 Aligned_cols=32 Identities=19% Similarity=0.170 Sum_probs=28.0
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
-+-+++||+.+ =+|+++|..|+++|.+|.+.+
T Consensus 16 gk~~lVTGa~~--GIG~aia~~l~~~G~~V~l~~ 47 (169)
T PRK06720 16 GKVAIVTGGGI--GIGRNTALLLAKQGAKVIVTD 47 (169)
T ss_pred CCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEE
Confidence 35789999984 699999999999999999854
No 250
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=69.54 E-value=6.5 Score=39.10 Aligned_cols=41 Identities=22% Similarity=0.299 Sum_probs=33.3
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe--echhHHHHHhhc
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 243 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m--~s~~~~~~l~~~ 243 (376)
|=|+.||+. |=+|.++|..|.++|.+++. -+.+|.+.++++
T Consensus 13 kvVvITGAS--sGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~ 55 (282)
T KOG1205|consen 13 KVVLITGAS--SGIGEALAYELAKRGAKLVLVARRARRLERVAEE 55 (282)
T ss_pred CEEEEeCCC--cHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHH
Confidence 568999999 58999999999999997555 377787777544
No 251
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=69.43 E-value=5.7 Score=38.94 Aligned_cols=41 Identities=15% Similarity=0.229 Sum_probs=30.6
Q ss_pred CceEEEeccC-CchhHHHHHHHHHhcCCcEEEe-echhHHHHHh
Q 017172 200 TAHVLLRGTV-TANKVANAVASSLCQMGIKVAT-ICKDDYEKLK 241 (376)
Q Consensus 200 t~eVfL~G~~-~~sKv~~AiA~~LC~rgv~V~m-~s~~~~~~l~ 241 (376)
-|-++.||+. + +=+|+|+|..|++.|.+|++ .+.++-+.++
T Consensus 9 gk~alITGa~~s-~GIG~a~A~~la~~Ga~Vv~~~~~~~l~~~~ 51 (303)
T PLN02730 9 GKRAFIAGVADD-NGYGWAIAKALAAAGAEILVGTWVPALNIFE 51 (303)
T ss_pred CCEEEEeCCCCC-CcHHHHHHHHHHHCCCEEEEEeCcchhhHHH
Confidence 4578999993 2 47999999999999999998 2333433333
No 252
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=69.17 E-value=7.2 Score=37.38 Aligned_cols=58 Identities=21% Similarity=0.281 Sum_probs=38.3
Q ss_pred cCCceehhhhh-hcCCcCCceEEEeccCCchhHHHHHHHHHhcCC-cEEEeech--hHHHHHhhc
Q 017172 183 DGSSLAAAVVV-NSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVATICK--DDYEKLKLR 243 (376)
Q Consensus 183 dGstLtaAvVl-n~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rg-v~V~m~s~--~~~~~l~~~ 243 (376)
||....++.-- ..+...-+.|++.|+. -+|++++.+|.++| -+|.+.++ ++-+.+.++
T Consensus 105 D~~G~~~~l~~~~~~~~~~k~vlVlGaG---g~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~ 166 (278)
T PRK00258 105 DGIGFVRALEERLGVDLKGKRILILGAG---GAARAVILPLLDLGVAEITIVNRTVERAEELAKL 166 (278)
T ss_pred cHHHHHHHHHhccCCCCCCCEEEEEcCc---HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Confidence 55555555431 1223344689999985 79999999999999 57888443 344455444
No 253
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=68.98 E-value=8 Score=35.28 Aligned_cols=30 Identities=17% Similarity=0.245 Sum_probs=25.9
Q ss_pred eEEEeccCCchhHHHHHHHHHhc----CCcEEEeec
Q 017172 202 HVLLRGTVTANKVANAVASSLCQ----MGIKVATIC 233 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~----rgv~V~m~s 233 (376)
-|++||+++ =||+++|..|++ .|.+|++.+
T Consensus 2 ~vlItGas~--GIG~~~a~~la~~~~~~g~~V~~~~ 35 (256)
T TIGR01500 2 VCLVTGASR--GFGRTIAQELAKCLKSPGSVLVLSA 35 (256)
T ss_pred EEEEecCCC--chHHHHHHHHHHhhccCCcEEEEEE
Confidence 378999994 899999999997 799998854
No 254
>PRK09620 hypothetical protein; Provisional
Probab=68.86 E-value=7.2 Score=37.06 Aligned_cols=20 Identities=20% Similarity=0.346 Sum_probs=18.8
Q ss_pred hHHHHHHHHHhcCCcEEEee
Q 017172 213 KVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 213 Kv~~AiA~~LC~rgv~V~m~ 232 (376)
++|++||.+|.++|.+|+++
T Consensus 30 fiGs~LA~~L~~~Ga~V~li 49 (229)
T PRK09620 30 TIGRIIAEELISKGAHVIYL 49 (229)
T ss_pred HHHHHHHHHHHHCCCeEEEE
Confidence 99999999999999999874
No 255
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=68.47 E-value=6 Score=39.12 Aligned_cols=60 Identities=28% Similarity=0.364 Sum_probs=43.2
Q ss_pred cCCceehhhhhhcCCcCC--ceEEEeccCCchhHHHHHHHHHhcCCc-EEEee--chhHHHHHhhcCc
Q 017172 183 DGSSLAAAVVVNSLPKTT--AHVLLRGTVTANKVANAVASSLCQMGI-KVATI--CKDDYEKLKLRIP 245 (376)
Q Consensus 183 dGstLtaAvVln~IP~~t--~eVfL~G~~~~sKv~~AiA~~LC~rgv-~V~m~--s~~~~~~l~~~~p 245 (376)
||-.+..+-.=+.+|... ++|++.|+.+| ||||+.+|.+.|+ +|.+. +.++.+.|.+..+
T Consensus 107 D~~G~~~~L~~~~~~~~~~~~~vlilGAGGA---arAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~ 171 (283)
T COG0169 107 DGIGFLRALKEFGLPVDVTGKRVLILGAGGA---ARAVAFALAEAGAKRITVVNRTRERAEELADLFG 171 (283)
T ss_pred CHHHHHHHHHhcCCCcccCCCEEEEECCcHH---HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 555555554444555554 78999999974 9999999999996 57773 3467777776644
No 256
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=68.35 E-value=8.1 Score=41.86 Aligned_cols=32 Identities=16% Similarity=0.180 Sum_probs=28.6
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
.+-|++||+++ -||+++|..|+++|.+|++.+
T Consensus 414 gkvvLVTGasg--gIG~aiA~~La~~Ga~Vvi~~ 445 (676)
T TIGR02632 414 RRVAFVTGGAG--GIGRETARRLAAEGAHVVLAD 445 (676)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHhCCCEEEEEe
Confidence 36799999995 999999999999999999844
No 257
>PRK07791 short chain dehydrogenase; Provisional
Probab=68.26 E-value=9.3 Score=35.98 Aligned_cols=30 Identities=20% Similarity=0.247 Sum_probs=27.2
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+-+++||+++ =+|++||..|+++|.+|++.
T Consensus 7 k~~lITGas~--GIG~aia~~la~~G~~vii~ 36 (286)
T PRK07791 7 RVVIVTGAGG--GIGRAHALAFAAEGARVVVN 36 (286)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCEEEEe
Confidence 5789999994 89999999999999999884
No 258
>PRK06141 ornithine cyclodeaminase; Validated
Probab=68.13 E-value=30 Score=33.96 Aligned_cols=96 Identities=23% Similarity=0.229 Sum_probs=62.7
Q ss_pred hcCCeEEeeccccccccccc-ccceeeeccCCCccEEEEcCCceeh-------hhhhhcC-CcCCceEEEeccCCchhHH
Q 017172 145 AKGVKVISLGLLNQGEELNR-NGEIYLERQPNKLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 215 (376)
Q Consensus 145 ~~GvKVlSLGlLNq~e~LN~-~G~l~v~k~P~~LrvrVVdGstLta-------AvVln~I-P~~t~eVfL~G~~~~sKv~ 215 (376)
-.|+|+++.--=|....|-. .|.+.+.---...-+=++||+.||+ |+..+-+ +++.+.|.+.|.. ..|
T Consensus 61 ~~g~K~~~~~p~N~~~glp~~~g~v~l~d~~tG~p~ai~d~~~lT~~RTaa~sala~~~La~~~~~~v~iiG~G---~~a 137 (314)
T PRK06141 61 YIGVKAVTVFPGNPARGLPGLHSTYLLFDGRTGEPLALVDGTELTARRTAAASALAASYLARKDASRLLVVGTG---RLA 137 (314)
T ss_pred eeEEEEEeecCCCCcCCCCceEEEEEEEECCCCCEEEEEcCcchhcchhHHHHHHHHHHhCCCCCceEEEECCc---HHH
Confidence 46999999766565444422 3455443222355677899999974 2333334 6789999999987 899
Q ss_pred HHHHHHHhc-CC-cEEEeech--hHHHHHhhc
Q 017172 216 NAVASSLCQ-MG-IKVATICK--DDYEKLKLR 243 (376)
Q Consensus 216 ~AiA~~LC~-rg-v~V~m~s~--~~~~~l~~~ 243 (376)
++++.+||. ++ -+|.+.++ +.-+.+..+
T Consensus 138 ~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~ 169 (314)
T PRK06141 138 SLLALAHASVRPIKQVRVWGRDPAKAEALAAE 169 (314)
T ss_pred HHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHH
Confidence 999998885 55 56777433 444445444
No 259
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=67.82 E-value=8.2 Score=40.41 Aligned_cols=48 Identities=15% Similarity=0.308 Sum_probs=33.9
Q ss_pred cEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 178 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 178 rvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
-+.||+|..-++...+. -| .+.|++||++ ++|+.|+.+..++..+|++
T Consensus 167 ~v~vv~g~~~~~~~l~~-~~--~d~i~FTGS~---~vG~~V~~~aa~~l~pv~l 214 (493)
T PTZ00381 167 YVRVIEGGVEVTTELLK-EP--FDHIFFTGSP---RVGKLVMQAAAENLTPCTL 214 (493)
T ss_pred EEEEecCCHHHHHHHHh-CC--CCEEEEECCH---HHHHHHHHHHHhcCCcEEE
Confidence 46677775433444444 24 7889999988 8999999888887777755
No 260
>PRK05599 hypothetical protein; Provisional
Probab=67.07 E-value=10 Score=34.60 Aligned_cols=39 Identities=23% Similarity=0.430 Sum_probs=28.9
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeec--hhHHHHHhhc
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKLR 243 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s--~~~~~~l~~~ 243 (376)
-|++||+++ =+|+++|..|++ |.+|++.+ +++-+.+.++
T Consensus 2 ~vlItGas~--GIG~aia~~l~~-g~~Vil~~r~~~~~~~~~~~ 42 (246)
T PRK05599 2 SILILGGTS--DIAGEIATLLCH-GEDVVLAARRPEAAQGLASD 42 (246)
T ss_pred eEEEEeCcc--HHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHH
Confidence 479999994 799999999995 99999943 3344444333
No 261
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=66.84 E-value=7.1 Score=38.46 Aligned_cols=40 Identities=25% Similarity=0.316 Sum_probs=30.4
Q ss_pred ceEEEeccCCchh--HHHHHHHHHhcCCcEEEeechhHHHHH
Q 017172 201 AHVLLRGTVTANK--VANAVASSLCQMGIKVATICKDDYEKL 240 (376)
Q Consensus 201 ~eVfL~G~~~~sK--v~~AiA~~LC~rgv~V~m~s~~~~~~l 240 (376)
+=+|++|+.|.=| ++.|+|.++.++|.||++.|.|--++|
T Consensus 2 r~~~~~GKGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dpa~~L 43 (305)
T PF02374_consen 2 RILFFGGKGGVGKTTVAAALALALARRGKRTLLVSTDPAHSL 43 (305)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEESSTTTHH
T ss_pred eEEEEecCCCCCcHHHHHHHHHHHhhCCCCeeEeecCCCccH
Confidence 4578887765445 888999999999999999888755444
No 262
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=66.70 E-value=7.1 Score=37.33 Aligned_cols=32 Identities=22% Similarity=0.387 Sum_probs=28.1
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeechh
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATICKD 235 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~ 235 (376)
.|+++|++| =||++++.+|.++|+.|...++.
T Consensus 2 riLI~GasG--~lG~~l~~~l~~~~~~v~~~~r~ 33 (286)
T PF04321_consen 2 RILITGASG--FLGSALARALKERGYEVIATSRS 33 (286)
T ss_dssp EEEEETTTS--HHHHHHHHHHTTTSEEEEEESTT
T ss_pred EEEEECCCC--HHHHHHHHHHhhCCCEEEEeCch
Confidence 589999996 99999999999999999885433
No 263
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=66.18 E-value=11 Score=38.27 Aligned_cols=47 Identities=21% Similarity=0.351 Sum_probs=27.4
Q ss_pred EEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 179 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 179 vrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.+|.|..-+...+++. ..+-|++||++ ++|++|+....++..+|.+
T Consensus 179 ~~vv~g~~~~~~~l~~~---~vd~V~ftGs~---~~g~~i~~~aa~~~~~~~l 225 (453)
T cd07099 179 LQVVTGDGATGAALIDA---GVDKVAFTGSV---ATGRKVMAAAAERLIPVVL 225 (453)
T ss_pred EEEEeCCchHHHHHhcC---CCCEEEEECCH---HHHHHHHHHHHhcCCeEEE
Confidence 45555544333334432 36677777766 6777777766666666654
No 264
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=65.78 E-value=7.5 Score=39.55 Aligned_cols=31 Identities=16% Similarity=0.164 Sum_probs=29.4
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.+.|+.||++| =||..|+..|-+||++|.-
T Consensus 5 ~~~~VcVTGAsG--fIgswivk~LL~rGY~V~g 35 (327)
T KOG1502|consen 5 EGKKVCVTGASG--FIGSWIVKLLLSRGYTVRG 35 (327)
T ss_pred CCcEEEEeCCch--HHHHHHHHHHHhCCCEEEE
Confidence 678999999997 8999999999999999998
No 265
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=65.75 E-value=11 Score=36.53 Aligned_cols=31 Identities=26% Similarity=0.343 Sum_probs=27.6
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
-+-++.||+++ =+|+|||..|++.|-+|++.
T Consensus 8 gkvalVTG~s~--GIG~aia~~la~~Ga~v~i~ 38 (270)
T KOG0725|consen 8 GKVALVTGGSS--GIGKAIALLLAKAGAKVVIT 38 (270)
T ss_pred CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEE
Confidence 35689999994 79999999999999999994
No 266
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=65.64 E-value=6.8 Score=36.65 Aligned_cols=27 Identities=15% Similarity=0.306 Sum_probs=24.1
Q ss_pred EEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 203 VLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
||+||+++ =||+.+|..|.++|.+|+.
T Consensus 2 ilVtGa~G--fiG~~l~~~L~~~g~~~v~ 28 (308)
T PRK11150 2 IIVTGGAG--FIGSNIVKALNDKGITDIL 28 (308)
T ss_pred EEEecCCc--HHHHHHHHHHHhCCCceEE
Confidence 79999997 8999999999999986554
No 267
>cd00431 cysteine_hydrolases Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It also contains isochorismatase, an enzyme that catalyzes the conversion of isochorismate to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of the vinyl ether bond, and other related enzymes with unknown function.
Probab=65.64 E-value=77 Score=26.99 Aligned_cols=32 Identities=19% Similarity=0.252 Sum_probs=28.7
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
|.++|+|+|-.+ +=--.+.|+.+.++|++|.+
T Consensus 109 ~i~~vil~G~~t-~~CV~~T~~~a~~~G~~v~v 140 (161)
T cd00431 109 GIDTLVVCGIAT-DICVLATARDALDLGYRVIV 140 (161)
T ss_pred CCCEEEEEecCc-ChhHHHHHHHHHHCCCEEEE
Confidence 889999999997 56568889999999999999
No 268
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=64.97 E-value=7.3 Score=38.11 Aligned_cols=93 Identities=15% Similarity=0.175 Sum_probs=51.3
Q ss_pred CceeccchhhhHHHHHHHHHHHHHHhcCCeEEeecccccccccccccceeeeccCCCccEEEEcCCceehhhhhhcCCcC
Q 017172 120 IVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKT 199 (376)
Q Consensus 120 ~fqY~l~~~~~~IN~lIE~AIl~Ad~~GvKVlSLGlLNq~e~LN~~G~l~v~k~P~~LrvrVVdGstLtaAvVln~IP~~ 199 (376)
|+--.+|. |+.|-.++.+.=.+|++.|+= |-= .+.+|.++ =-=-||.....+.--..+...
T Consensus 63 G~nVTiP~-K~~~~~~~D~l~~~A~~iGAV-------NTv--~~~~g~l~---------G~NTD~~Gf~~~l~~~~~~~~ 123 (288)
T PRK12749 63 GTGVSMPN-KQLACEYVDELTPAAKLVGAI-------NTI--VNDDGYLR---------GYNTDGTGHIRAIKESGFDIK 123 (288)
T ss_pred EEEECcCC-HHHHHHHhccCCHHHHHhCce-------eEE--EccCCEEE---------EEecCHHHHHHHHHhcCCCcC
Confidence 33444454 555666666666677777752 211 11222211 011234333333322223323
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCc-EEEeech
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGI-KVATICK 234 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv-~V~m~s~ 234 (376)
-+.|++.|+.+ .||||+.+|++.|+ +|.++++
T Consensus 124 ~k~vlvlGaGG---aarAi~~~l~~~g~~~i~i~nR 156 (288)
T PRK12749 124 GKTMVLLGAGG---ASTAIGAQGAIEGLKEIKLFNR 156 (288)
T ss_pred CCEEEEECCcH---HHHHHHHHHHHCCCCEEEEEeC
Confidence 36899999986 38999999999998 5666543
No 269
>PRK12377 putative replication protein; Provisional
Probab=64.96 E-value=11 Score=36.39 Aligned_cols=51 Identities=20% Similarity=0.273 Sum_probs=36.3
Q ss_pred hhcCCcCCceEEEeccCCchh--HHHHHHHHHhcCCcEEEeech-hHHHHHhhc
Q 017172 193 VNSLPKTTAHVLLRGTVTANK--VANAVASSLCQMGIKVATICK-DDYEKLKLR 243 (376)
Q Consensus 193 ln~IP~~t~eVfL~G~~~~sK--v~~AiA~~LC~rgv~V~m~s~-~~~~~l~~~ 243 (376)
.++.-.+..-++|.|..|.-| ++.|||..|+++|+.|+.++. +-.+.|+..
T Consensus 94 a~~~~~~~~~l~l~G~~GtGKThLa~AIa~~l~~~g~~v~~i~~~~l~~~l~~~ 147 (248)
T PRK12377 94 ADELMTGCTNFVFSGKPGTGKNHLAAAIGNRLLAKGRSVIVVTVPDVMSRLHES 147 (248)
T ss_pred HHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHHcCCCeEEEEHHHHHHHHHHH
Confidence 344444456789999776557 999999999999999987443 444555543
No 270
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=64.85 E-value=8.3 Score=38.95 Aligned_cols=36 Identities=25% Similarity=0.339 Sum_probs=28.9
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEe--echhHHHH
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 239 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m--~s~~~~~~ 239 (376)
-|+.||+. |=+||++|+-+.|||-++++ ++++-.+.
T Consensus 40 ~vLITGgg--~GlGr~ialefa~rg~~~vl~Din~~~~~e 77 (300)
T KOG1201|consen 40 IVLITGGG--SGLGRLIALEFAKRGAKLVLWDINKQGNEE 77 (300)
T ss_pred EEEEeCCC--chHHHHHHHHHHHhCCeEEEEeccccchHH
Confidence 58899998 58999999999999998877 45443333
No 271
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=64.64 E-value=11 Score=39.66 Aligned_cols=48 Identities=13% Similarity=0.310 Sum_probs=35.2
Q ss_pred cEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 178 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 178 rvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
-+.||+|..-+.+..+. ++.+.|++||++ .+|+.|+....++..+|++
T Consensus 170 vv~vv~G~~~~~~~l~~---~~vd~V~FTGS~---~~G~~I~~~aa~~l~~v~L 217 (484)
T PLN02174 170 AVRVVEGAVTETTALLE---QKWDKIFYTGSS---KIGRVIMAAAAKHLTPVVL 217 (484)
T ss_pred EEEEEECChHHHHHHhc---ccCCEEEEECCh---HHHHHHHHHHHhcCCcEEE
Confidence 46678775433444443 478999999999 8999999887777777766
No 272
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=64.40 E-value=8.5 Score=37.72 Aligned_cols=31 Identities=23% Similarity=0.344 Sum_probs=27.2
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
.+-+.+||.. |=+|||||..|.++|.||++.
T Consensus 14 sk~~~vtGg~--sGIGrAia~~la~~Garv~v~ 44 (256)
T KOG1200|consen 14 SKVAAVTGGS--SGIGRAIAQLLAKKGARVAVA 44 (256)
T ss_pred cceeEEecCC--chHHHHHHHHHHhcCcEEEEe
Confidence 4556789998 589999999999999999993
No 273
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=64.39 E-value=12 Score=33.48 Aligned_cols=41 Identities=24% Similarity=0.247 Sum_probs=34.4
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeechhHHHHHhh
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKL 242 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~~~~l~~ 242 (376)
.-+.|++.|.. +||...|..|.+.|.+|.+++++.-+.++.
T Consensus 12 ~~~~vlVvGGG---~va~rka~~Ll~~ga~V~VIsp~~~~~l~~ 52 (157)
T PRK06719 12 HNKVVVIIGGG---KIAYRKASGLKDTGAFVTVVSPEICKEMKE 52 (157)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEEcCccCHHHHh
Confidence 44689999998 999999999999999999987765555543
No 274
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=64.38 E-value=15 Score=31.02 Aligned_cols=32 Identities=31% Similarity=0.436 Sum_probs=26.4
Q ss_pred cCCceEEEeccCCchhHHHHHHHHHhcCC-cEEEee
Q 017172 198 KTTAHVLLRGTVTANKVANAVASSLCQMG-IKVATI 232 (376)
Q Consensus 198 ~~t~eVfL~G~~~~sKv~~AiA~~LC~rg-v~V~m~ 232 (376)
...+.|.+.|.. .+|+++|.+|++.| .+|.+.
T Consensus 17 ~~~~~i~iiG~G---~~g~~~a~~l~~~g~~~v~v~ 49 (155)
T cd01065 17 LKGKKVLILGAG---GAARAVAYALAELGAAKIVIV 49 (155)
T ss_pred CCCCEEEEECCc---HHHHHHHHHHHHCCCCEEEEE
Confidence 345789999985 89999999999996 677774
No 275
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=64.33 E-value=10 Score=36.01 Aligned_cols=49 Identities=24% Similarity=0.220 Sum_probs=34.0
Q ss_pred cCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 183 DGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 183 dGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
||.....+.--......-+.|++.|+. -+|+++|.+|.+.|.+|.+.++
T Consensus 100 D~~G~~~~l~~~~~~~~~k~vliiGaG---g~g~aia~~L~~~g~~v~v~~R 148 (270)
T TIGR00507 100 DGIGLVSDLERLIPLRPNQRVLIIGAG---GAARAVALPLLKADCNVIIANR 148 (270)
T ss_pred CHHHHHHHHHhcCCCccCCEEEEEcCc---HHHHHHHHHHHHCCCEEEEEeC
Confidence 555555542111122335789999996 6999999999999999988543
No 276
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=64.33 E-value=10 Score=38.27 Aligned_cols=43 Identities=21% Similarity=0.308 Sum_probs=36.1
Q ss_pred hhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEeechhHH
Q 017172 193 VNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY 237 (376)
Q Consensus 193 ln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~~ 237 (376)
++.+++..+.|.+.|..| .+|..+|.+|.++|..|.+.+.+..
T Consensus 91 ~~~~~~~~~~I~IiGG~G--lmG~slA~~l~~~G~~V~~~d~~~~ 133 (374)
T PRK11199 91 FKTLNPDLRPVVIVGGKG--QLGRLFAKMLTLSGYQVRILEQDDW 133 (374)
T ss_pred ccccCcccceEEEEcCCC--hhhHHHHHHHHHCCCeEEEeCCCcc
Confidence 467777888999999666 9999999999999999999665443
No 277
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=64.11 E-value=15 Score=36.84 Aligned_cols=100 Identities=14% Similarity=0.134 Sum_probs=54.5
Q ss_pred hhhHHHHHHHHHHHHHHhcCCeEEeecccccccccccccceeeec----cCCCccEEEEcCCceehhhhhhcCCcCCceE
Q 017172 128 RREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLER----QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHV 203 (376)
Q Consensus 128 ~~~~IN~lIE~AIl~Ad~~GvKVlSLGlLNq~e~LN~~G~l~v~k----~P~~LrvrVVdGstLtaAvVln~IP~~t~eV 203 (376)
.+.++..++...-.|- ..|+.|-.+-.-.-..+-....-.|+.. +-+.--++ +++.-.+... =-+-|..-+.|
T Consensus 137 akaal~gl~rsla~E~-~~gi~v~~i~~~~~~~~~~~~~~~~l~s~~~a~~~g~~i~-~~~~~~~~~~-~~~~~~~g~~v 213 (450)
T PRK08261 137 AQRALEGFTRSLGKEL-RRGATAQLVYVAPGAEAGLESTLRFFLSPRSAYVSGQVVR-VGAADAAPPA-DWDRPLAGKVA 213 (450)
T ss_pred HHHHHHHHHHHHHHHh-hcCCEEEEEecCCCCHHHHHHHHHHhcCCccCCccCcEEE-ecCCcccCCC-CcccCCCCCEE
Confidence 5667777777776677 6788874432211111111112223211 11122233 3332211100 00112234679
Q ss_pred EEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 204 LLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 204 fL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
++||+++ =||+++|..|+++|.+|++.
T Consensus 214 lItGasg--gIG~~la~~l~~~Ga~vi~~ 240 (450)
T PRK08261 214 LVTGAAR--GIGAAIAEVLARDGAHVVCL 240 (450)
T ss_pred EEecCCC--HHHHHHHHHHHHCCCEEEEE
Confidence 9999995 89999999999999999984
No 278
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=63.85 E-value=10 Score=34.33 Aligned_cols=21 Identities=24% Similarity=0.382 Sum_probs=19.1
Q ss_pred hhHHHHHHHHHhcCCcEEEee
Q 017172 212 NKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 212 sKv~~AiA~~LC~rgv~V~m~ 232 (376)
+=+|++||..|+++|.+|+++
T Consensus 6 ~GiG~aia~~l~~~Ga~V~~~ 26 (241)
T PF13561_consen 6 SGIGRAIARALAEEGANVILT 26 (241)
T ss_dssp SHHHHHHHHHHHHTTEEEEEE
T ss_pred CChHHHHHHHHHHCCCEEEEE
Confidence 359999999999999999993
No 279
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=63.64 E-value=9.9 Score=37.15 Aligned_cols=44 Identities=32% Similarity=0.385 Sum_probs=33.2
Q ss_pred ceehhhhhhcCCc---CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 186 SLAAAVVVNSLPK---TTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 186 tLtaAvVln~IP~---~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
|||||. --.+|. -+.+|+..|+. =.|-+.|.+|.++|++|+++.
T Consensus 2 ~~~~~~-~~~~~~~~~~~~dV~IvGaG---~aGl~~A~~L~~~G~~v~v~E 48 (415)
T PRK07364 2 TLTAAT-SPTLPSTRSLTYDVAIVGGG---IVGLTLAAALKDSGLRIALIE 48 (415)
T ss_pred cccccC-CCCCCCCCccccCEEEECcC---HHHHHHHHHHhcCCCEEEEEe
Confidence 556553 233443 24579999998 789999999999999999954
No 280
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=63.17 E-value=9.3 Score=39.26 Aligned_cols=33 Identities=24% Similarity=0.299 Sum_probs=26.9
Q ss_pred CceEEEeccC---------------CchhHHHHHHHHHhcCCcEEEeec
Q 017172 200 TAHVLLRGTV---------------TANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 200 t~eVfL~G~~---------------~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
-+.|+.||.. | -|+|++||.+|.++|.+|.+++
T Consensus 185 ~~~vlit~g~t~E~iD~VR~itN~SS-G~~g~~~a~~~~~~Ga~V~~~~ 232 (390)
T TIGR00521 185 GKRVLITAGPTREPIDPVRFISNLSS-GKMGLALAEAAYKRGADVTLIT 232 (390)
T ss_pred CceEEEecCCccCCCCceeeecCCCc-chHHHHHHHHHHHCCCEEEEeC
Confidence 4678888763 2 2899999999999999999844
No 281
>PF00857 Isochorismatase: Isochorismatase family; InterPro: IPR000868 This is a family of hydrolase enzymes. Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate (3.3.2.1 from EC).; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1XN4_A 3KL2_F 1YZV_A 3IRV_A 1IM5_A 1ILW_A 3PL1_A 1NF9_A 1NF8_A 1X9G_A ....
Probab=63.14 E-value=77 Score=27.27 Aligned_cols=102 Identities=22% Similarity=0.224 Sum_probs=59.8
Q ss_pred chhhhHHHHHHHHHHHHHHhcCCeEEeeccccc---------------ccccccccceeeec-cCCCccEEEEcCC---c
Q 017172 126 PWRREAINSLIEEAILEADAKGVKVISLGLLNQ---------------GEELNRNGEIYLER-QPNKLKIKVVDGS---S 186 (376)
Q Consensus 126 ~~~~~~IN~lIE~AIl~Ad~~GvKVlSLGlLNq---------------~e~LN~~G~l~v~k-~P~~LrvrVVdGs---t 186 (376)
....+.+-.-|.+.+..|.+.|+.|+-.--.++ .-.....|.-++.. .| ...-.|++=+ .
T Consensus 19 ~~~~~~~i~~i~~l~~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~l~~-~~~~~vi~K~~~sa 97 (174)
T PF00857_consen 19 PPNAEAIIPNINRLLDAARAAGVPVIHTRDIHDSPHWSGPFEPKPWPPHCIPGSPGAELVPELAP-QPGDPVIEKNRYSA 97 (174)
T ss_dssp STTHHHHHHHHHHHHHHHHHTTEEEEEEEESBSTTTTTTSGGHSCHTSCSBTTSGGGSBHGGGHC-HTTSEEEEESSSST
T ss_pred ccCHHHHHHHHHHHHHHHHHhCCCeEEEEeeecccccccccccccccccccCCCCccceeeEeec-ccccceEEeecccc
Confidence 344555666677777888999999887766666 00111112222211 12 1122233211 1
Q ss_pred e---ehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 187 L---AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 187 L---taAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
. --...|++ .|.++|+|+|-.+ +=-=.+.|+.+.++|++|.+
T Consensus 98 f~~t~L~~~L~~--~gi~~vil~G~~t-~~CV~~Ta~~a~~~g~~v~v 142 (174)
T PF00857_consen 98 FFGTDLDEILRK--RGIDTVILCGVAT-DVCVLATARDAFDRGYRVIV 142 (174)
T ss_dssp TTTSSHHHHHHH--TTESEEEEEEEST-TTHHHHHHHHHHHTT-EEEE
T ss_pred cccccccccccc--cccceEEEccccc-CcEEehhHHHHHHCCCEEEE
Confidence 1 01223444 6889999999987 45458899999999999999
No 282
>PRK08939 primosomal protein DnaI; Reviewed
Probab=63.06 E-value=14 Score=36.61 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=33.8
Q ss_pred CceEEEeccCCchh--HHHHHHHHHhcCCcEEEeec-hhHHHHHhhc
Q 017172 200 TAHVLLRGTVTANK--VANAVASSLCQMGIKVATIC-KDDYEKLKLR 243 (376)
Q Consensus 200 t~eVfL~G~~~~sK--v~~AiA~~LC~rgv~V~m~s-~~~~~~l~~~ 243 (376)
.+-++|.|..|.=| ++.|||..||++|+.|..++ .+-...|+..
T Consensus 156 ~~gl~L~G~~G~GKThLa~Aia~~l~~~g~~v~~~~~~~l~~~lk~~ 202 (306)
T PRK08939 156 VKGLYLYGDFGVGKSYLLAAIANELAKKGVSSTLLHFPEFIRELKNS 202 (306)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHHcCCCEEEEEHHHHHHHHHHH
Confidence 45689999887556 99999999999999998744 3344666654
No 283
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=62.80 E-value=14 Score=35.63 Aligned_cols=65 Identities=17% Similarity=0.202 Sum_probs=41.2
Q ss_pred EEeccCCchhHHHHHHHHHhcCC--cEEEeechhHHHHHhhcCchhhccceeeecccccCcceEEEEcCCCCHHHhhcCC
Q 017172 204 LLRGTVTANKVANAVASSLCQMG--IKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAP 281 (376)
Q Consensus 204 fL~G~~~~sKv~~AiA~~LC~rg--v~V~m~s~~~~~~l~~~~p~~~~~~Lv~~t~y~a~~~K~WlVG~~l~~~eQ~~Ap 281 (376)
++||+++ =||+.|+..|+++| .+|.+++... +..... +..+. ..+.++.||-.++++=..|-
T Consensus 1 LVTGgsG--flG~~iv~~Ll~~g~~~~Vr~~d~~~--------~~~~~~---~~~~~---~~~~~~~~Di~d~~~l~~a~ 64 (280)
T PF01073_consen 1 LVTGGSG--FLGSHIVRQLLERGYIYEVRVLDRSP--------PPKFLK---DLQKS---GVKEYIQGDITDPESLEEAL 64 (280)
T ss_pred CEEcCCc--HHHHHHHHHHHHCCCceEEEEccccc--------ccccch---hhhcc---cceeEEEeccccHHHHHHHh
Confidence 4799997 89999999999999 6777633110 000000 00111 11348999977777766787
Q ss_pred CCc
Q 017172 282 KGT 284 (376)
Q Consensus 282 ~Gt 284 (376)
+|.
T Consensus 65 ~g~ 67 (280)
T PF01073_consen 65 EGV 67 (280)
T ss_pred cCC
Confidence 774
No 284
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=62.76 E-value=9.7 Score=40.79 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=28.8
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcC-CcEEEeec
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVATIC 233 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~r-gv~V~m~s 233 (376)
..+.||+||+++ =+|+.++.+|.++ |++|+.++
T Consensus 314 ~~~~VLVTGatG--FIGs~Lv~~Ll~~~g~~V~~l~ 347 (660)
T PRK08125 314 RRTRVLILGVNG--FIGNHLTERLLRDDNYEVYGLD 347 (660)
T ss_pred cCCEEEEECCCc--hHHHHHHHHHHhCCCcEEEEEe
Confidence 566899999998 8999999999985 79999854
No 285
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=62.42 E-value=14 Score=34.05 Aligned_cols=88 Identities=19% Similarity=0.243 Sum_probs=51.9
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeechhHHHHHhhcCchhhccceeeecccccC--cceE--EEEcC--CC
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAH--KTKI--WLVGD--DL 272 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~~~~l~~~~p~~~~~~Lv~~t~y~a~--~~K~--WlVG~--~l 272 (376)
.-|+|...|-. |+|+.+|.+|-..|.+|.+...|-...+|... ..+-+ .+..++ ..-+ .--|. -+
T Consensus 22 ~Gk~vvV~GYG---~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~----dGf~v--~~~~~a~~~adi~vtaTG~~~vi 92 (162)
T PF00670_consen 22 AGKRVVVIGYG---KVGKGIARALRGLGARVTVTEIDPIRALQAAM----DGFEV--MTLEEALRDADIFVTATGNKDVI 92 (162)
T ss_dssp TTSEEEEE--S---HHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH----TT-EE--E-HHHHTTT-SEEEE-SSSSSSB
T ss_pred CCCEEEEeCCC---cccHHHHHHHhhCCCEEEEEECChHHHHHhhh----cCcEe--cCHHHHHhhCCEEEECCCCcccc
Confidence 45688999988 99999999999999999997666655554431 11111 221111 2233 33453 36
Q ss_pred CHHHhhcCCCCceeeecccCCCc
Q 017172 273 TGKEQARAPKGTIFIPYTQIPPR 295 (376)
Q Consensus 273 ~~~eQ~~Ap~Gt~FipfsqfPp~ 295 (376)
+.+.=...+.|+......+|+--
T Consensus 93 ~~e~~~~mkdgail~n~Gh~d~E 115 (162)
T PF00670_consen 93 TGEHFRQMKDGAILANAGHFDVE 115 (162)
T ss_dssp -HHHHHHS-TTEEEEESSSSTTS
T ss_pred CHHHHHHhcCCeEEeccCcCcee
Confidence 88888888888888777666544
No 286
>PF00258 Flavodoxin_1: Flavodoxin; InterPro: IPR008254 This domain is found in a number of proteins including flavodoxin and nitric-oxide synthase. Flavodoxins are electron-transfer proteins that function in various electron transport systems. They bind one FMN molecule, which serves as a redox-active prosthetic group [] and are functionally interchangeable with ferredoxins. They have been isolated from prokaryotes, cyanobacteria, and some eukaryotic algae. Nitric oxide synthase (1.14.13.39 from EC) produces nitric oxide from L-arginie and NADPH. Nitric oxide acts as a messenger molecule in the body.; GO: 0010181 FMN binding, 0016491 oxidoreductase activity; PDB: 2WC1_A 2FVX_A 2FOX_A 6NUL_A 1FVX_A 2FAX_A 1FLN_A 1FLA_A 4NLL_A 2FDX_A ....
Probab=62.14 E-value=6.8 Score=32.88 Aligned_cols=33 Identities=30% Similarity=0.539 Sum_probs=27.3
Q ss_pred eccCCchhHHHHHHHHHhcCCcEEEeechhHHHHH
Q 017172 206 RGTVTANKVANAVASSLCQMGIKVATICKDDYEKL 240 (376)
Q Consensus 206 ~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~~~~l 240 (376)
||++ -++|++||..|.++|++|.+++-++++..
T Consensus 7 tG~t--e~~A~~ia~~l~~~g~~~~~~~~~~~~~~ 39 (143)
T PF00258_consen 7 TGNT--EKMAEAIAEGLRERGVEVRVVDLDDFDDS 39 (143)
T ss_dssp SSHH--HHHHHHHHHHHHHTTSEEEEEEGGGSCHH
T ss_pred chhH--HHHHHHHHHHHHHcCCceeeechhhhhhh
Confidence 6777 59999999999999999988666666643
No 287
>PRK07578 short chain dehydrogenase; Provisional
Probab=61.89 E-value=11 Score=32.97 Aligned_cols=29 Identities=24% Similarity=0.330 Sum_probs=25.0
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
.|++||+++ -+|+++|..|+++ .+|+..+
T Consensus 2 ~vlItGas~--giG~~la~~l~~~-~~vi~~~ 30 (199)
T PRK07578 2 KILVIGASG--TIGRAVVAELSKR-HEVITAG 30 (199)
T ss_pred eEEEEcCCc--HHHHHHHHHHHhc-CcEEEEe
Confidence 589999984 9999999999998 8888743
No 288
>PRK05855 short chain dehydrogenase; Validated
Probab=61.80 E-value=16 Score=36.66 Aligned_cols=33 Identities=15% Similarity=0.230 Sum_probs=28.7
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.+.+++||+++ =||+++|..|.++|.+|++.+
T Consensus 314 ~~~~~lv~G~s~--giG~~~a~~l~~~G~~v~~~~ 346 (582)
T PRK05855 314 SGKLVVVTGAGS--GIGRETALAFAREGAEVVASD 346 (582)
T ss_pred CCCEEEEECCcC--HHHHHHHHHHHHCCCEEEEEe
Confidence 345799999995 899999999999999999844
No 289
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=61.74 E-value=9.1 Score=39.33 Aligned_cols=41 Identities=24% Similarity=0.302 Sum_probs=33.1
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEe---echhHHHHHhh
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKL 242 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m---~s~~~~~~l~~ 242 (376)
.+.|+.||+.+ =+|...+++|.++|..|++ ++....+++++
T Consensus 2 ~~~VLVtGgaG--yiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r 45 (343)
T KOG1371|consen 2 GKHVLVTGGAG--YIGSHTVLALLKRGYGVVIVDNLNNSYLESLKR 45 (343)
T ss_pred CcEEEEecCCc--ceehHHHHHHHhCCCcEEEEecccccchhHHHH
Confidence 46799999997 8999999999999999999 44444455544
No 290
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=61.60 E-value=16 Score=33.62 Aligned_cols=30 Identities=27% Similarity=0.297 Sum_probs=27.2
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
-+.|.+.|.. ++|+++|..|.+.|.+|++.
T Consensus 28 gk~v~I~G~G---~vG~~~A~~L~~~G~~Vvv~ 57 (200)
T cd01075 28 GKTVAVQGLG---KVGYKLAEHLLEEGAKLIVA 57 (200)
T ss_pred CCEEEEECCC---HHHHHHHHHHHHCCCEEEEE
Confidence 3679999997 99999999999999999983
No 291
>KOG2380 consensus Prephenate dehydrogenase (NADP+) [Amino acid transport and metabolism]
Probab=61.53 E-value=7.3 Score=40.83 Aligned_cols=135 Identities=27% Similarity=0.353 Sum_probs=89.4
Q ss_pred ccccccceeeeccCCCccEEEEcCCceehhhhhhcCCc--------CCceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 161 ELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK--------TTAHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 161 ~LN~~G~l~v~k~P~~LrvrVVdGstLtaAvVln~IP~--------~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
.|-++-.-|..--|..+++|-.| ||.|..-+|. .|.+|=..|=. -.|+-.|.+|-+.|..|.+.
T Consensus 10 ~l~~~~~t~~~~~p~~~~~~a~~-----~~~i~d~~~~~~s~~~~k~tl~IaIIGfG---nmGqflAetli~aGh~li~h 81 (480)
T KOG2380|consen 10 NLRRNSPTFLISPPRSLRIRAID-----AAQIFDYMVSEDSIEQWKATLVIAIIGFG---NMGQFLAETLIDAGHGLICH 81 (480)
T ss_pred CcccCCCceeccCcHHHHHHhhh-----hhhhhhcccCcchhhhcccceEEEEEecC---cHHHHHHHHHHhcCceeEec
Confidence 34455556666667677888776 4555544433 56677777776 58999999999999999998
Q ss_pred chhHHHHHhhcC-ch--hhcccee--------eecc----------cccCcceE-EEEcCCCCHHHhhcCCCCceeeecc
Q 017172 233 CKDDYEKLKLRI-PV--EAQHNLV--------LSTS----------YAAHKTKI-WLVGDDLTGKEQARAPKGTIFIPYT 290 (376)
Q Consensus 233 s~~~~~~l~~~~-p~--~~~~~Lv--------~~t~----------y~a~~~K~-WlVG~~l~~~eQ~~Ap~Gt~Fipfs 290 (376)
++.+|++++... .. +.-++|+ .+++ |--...|+ =|+||.++=+ +|+-+.|..|
T Consensus 82 sRsdyssaa~~yg~~~ft~lhdlcerhpDvvLlctsilsiekilatypfqrlrrgtlfvdvlSvK----efek~lfekY- 156 (480)
T KOG2380|consen 82 SRSDYSSAAEKYGSAKFTLLHDLCERHPDVVLLCTSILSIEKILATYPFQRLRRGTLFVDVLSVK----EFEKELFEKY- 156 (480)
T ss_pred CcchhHHHHHHhcccccccHHHHHhcCCCEEEEEehhhhHHHHHHhcCchhhccceeEeeeeecc----hhHHHHHHHh-
Confidence 889999999882 22 2222233 2221 10001244 5777777654 3444555555
Q ss_pred cCCCcCccCCccccccCcccCCCC
Q 017172 291 QIPPRKLRKDCFYHSTPAMIIPPS 314 (376)
Q Consensus 291 qfPp~~~R~DCtY~~tpAM~~P~~ 314 (376)
+-+||-..+|-.|-=|++
T Consensus 157 ------LPkdfDIlctHpmfGPks 174 (480)
T KOG2380|consen 157 ------LPKDFDILCTHPMFGPKS 174 (480)
T ss_pred ------CccccceEeecCCcCCCc
Confidence 559999999999999995
No 292
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=61.43 E-value=17 Score=31.85 Aligned_cols=38 Identities=18% Similarity=0.230 Sum_probs=30.3
Q ss_pred EEEeccCCchhHHHHHHHHHhcCCcEEEee--chhHHHHHhhc
Q 017172 203 VLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKLR 243 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rgv~V~m~--s~~~~~~l~~~ 243 (376)
|-..|+. =.|.|+|..|.++|.+|.|. +++..+.|+..
T Consensus 2 I~ViGaG---~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~ 41 (157)
T PF01210_consen 2 IAVIGAG---NWGTALAALLADNGHEVTLWGRDEEQIEEINET 41 (157)
T ss_dssp EEEESSS---HHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHH
T ss_pred EEEECcC---HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence 5667777 57999999999999999993 44566677765
No 293
>PRK08309 short chain dehydrogenase; Provisional
Probab=60.99 E-value=16 Score=33.13 Aligned_cols=28 Identities=32% Similarity=0.549 Sum_probs=23.6
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
.|+++|.++ ++.+++..|+++|.+|.+.
T Consensus 2 ~vlVtGGtG---~gg~la~~L~~~G~~V~v~ 29 (177)
T PRK08309 2 HALVIGGTG---MLKRVSLWLCEKGFHVSVI 29 (177)
T ss_pred EEEEECcCH---HHHHHHHHHHHCcCEEEEE
Confidence 489999873 5567999999999999883
No 294
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=60.92 E-value=13 Score=39.05 Aligned_cols=43 Identities=26% Similarity=0.441 Sum_probs=33.6
Q ss_pred CCcC-CceEEEeccCCchhHHHHHHHHHhcCCcEEEeec--hhHHHHHh
Q 017172 196 LPKT-TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLK 241 (376)
Q Consensus 196 IP~~-t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s--~~~~~~l~ 241 (376)
+|.+ .+.|.+.|.. ++|+.+|..|.++|+.|++.+ +++.+.++
T Consensus 412 ~~~~~~~hiiI~G~G---~~G~~la~~L~~~g~~vvvId~d~~~~~~~~ 457 (558)
T PRK10669 412 IPVDICNHALLVGYG---RVGSLLGEKLLAAGIPLVVIETSRTRVDELR 457 (558)
T ss_pred cccccCCCEEEECCC---hHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence 4444 3789999998 999999999999999999954 34445454
No 295
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=60.85 E-value=9 Score=36.57 Aligned_cols=28 Identities=14% Similarity=0.208 Sum_probs=24.3
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
.||+||+++ =||+.++.+|+++|.++++
T Consensus 2 kilITGgtG--~iG~~l~~~L~~~g~~~v~ 29 (352)
T PRK10084 2 KILVTGGAG--FIGSAVVRHIINNTQDSVV 29 (352)
T ss_pred eEEEECCCc--HHhHHHHHHHHHhCCCeEE
Confidence 589999996 8999999999999976443
No 296
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=60.35 E-value=18 Score=36.96 Aligned_cols=54 Identities=17% Similarity=0.241 Sum_probs=37.7
Q ss_pred cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
-| .=-+.+|.|..-..+-.|-+-| +.+-|++||.+ .+|+.|+....++..+|++
T Consensus 171 lP-~~~~~~v~g~~~~~~~~L~~~~-~vd~v~ftGs~---~~g~~v~~~aa~~l~~~~l 224 (457)
T cd07108 171 LP-AGVLNVITGYGEECGAALVDHP-DVDKVTFTGST---EVGKIIYRAAADRLIPVSL 224 (457)
T ss_pred CC-cCcEEEEeCCchHHHHHHhcCC-CcCEEEEECcH---HHHHHHHHHHhccCCeEEE
Confidence 36 4448888886443333333333 78889999988 8999999988777777765
No 297
>PLN02203 aldehyde dehydrogenase
Probab=59.75 E-value=14 Score=38.83 Aligned_cols=48 Identities=15% Similarity=0.303 Sum_probs=37.4
Q ss_pred cEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 178 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 178 rvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
-+.+|+|..-+...++.. | .+.|++||++ .+|+.|+....++..+|++
T Consensus 166 vv~vv~g~~~~~~~l~~~-~--vd~v~fTGS~---~~G~~v~~~aa~~l~~v~l 213 (484)
T PLN02203 166 AVKVIEGGPAVGEQLLQH-K--WDKIFFTGSP---RVGRIIMTAAAKHLTPVAL 213 (484)
T ss_pred EEEEEeCCHHHHHHHHhC-C--CCEEEEECCH---HHHHHHHHHHHhcCCCEEE
Confidence 477888765555555555 4 7889999999 8999999988777888776
No 298
>PRK07952 DNA replication protein DnaC; Validated
Probab=59.67 E-value=21 Score=34.34 Aligned_cols=50 Identities=24% Similarity=0.270 Sum_probs=36.0
Q ss_pred hhcCCcCCceEEEeccCCchh--HHHHHHHHHhcCCcEEEeech-hHHHHHhh
Q 017172 193 VNSLPKTTAHVLLRGTVTANK--VANAVASSLCQMGIKVATICK-DDYEKLKL 242 (376)
Q Consensus 193 ln~IP~~t~eVfL~G~~~~sK--v~~AiA~~LC~rgv~V~m~s~-~~~~~l~~ 242 (376)
.++...+..-++|.|..|.-| ++.|||.+|+++|.+|+.++- +-...++.
T Consensus 92 ~~~~~~~~~~~~l~G~~GtGKThLa~aia~~l~~~g~~v~~it~~~l~~~l~~ 144 (244)
T PRK07952 92 VEEFDGNIASFIFSGKPGTGKNHLAAAICNELLLRGKSVLIITVADIMSAMKD 144 (244)
T ss_pred HHhhccCCceEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEEHHHHHHHHHH
Confidence 344444556789999876557 899999999999999988543 33444544
No 299
>PRK08181 transposase; Validated
Probab=58.72 E-value=15 Score=35.83 Aligned_cols=44 Identities=30% Similarity=0.342 Sum_probs=33.2
Q ss_pred CCceEEEeccCCchh--HHHHHHHHHhcCCcEEEeec-hhHHHHHhh
Q 017172 199 TTAHVLLRGTVTANK--VANAVASSLCQMGIKVATIC-KDDYEKLKL 242 (376)
Q Consensus 199 ~t~eVfL~G~~~~sK--v~~AiA~~LC~rgv~V~m~s-~~~~~~l~~ 242 (376)
.-..|+|.|..|.-| ++.|||..+|++|.+|..++ .+-.+.|+.
T Consensus 105 ~~~nlll~Gp~GtGKTHLa~Aia~~a~~~g~~v~f~~~~~L~~~l~~ 151 (269)
T PRK08181 105 KGANLLLFGPPGGGKSHLAAAIGLALIENGWRVLFTRTTDLVQKLQV 151 (269)
T ss_pred cCceEEEEecCCCcHHHHHHHHHHHHHHcCCceeeeeHHHHHHHHHH
Confidence 445689998887667 99999999999999998743 444555543
No 300
>PRK08324 short chain dehydrogenase; Validated
Probab=58.07 E-value=16 Score=39.32 Aligned_cols=31 Identities=23% Similarity=0.228 Sum_probs=28.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+-|++||+++ -||+++|..|.++|.+|++++
T Consensus 423 k~vLVTGasg--gIG~~la~~L~~~Ga~Vvl~~ 453 (681)
T PRK08324 423 KVALVTGAAG--GIGKATAKRLAAEGACVVLAD 453 (681)
T ss_pred CEEEEecCCC--HHHHHHHHHHHHCcCEEEEEe
Confidence 6899999995 899999999999999999844
No 301
>PRK06835 DNA replication protein DnaC; Validated
Probab=57.87 E-value=18 Score=36.23 Aligned_cols=44 Identities=23% Similarity=0.293 Sum_probs=33.8
Q ss_pred CCceEEEeccCCchh--HHHHHHHHHhcCCcEEEeech-hHHHHHhh
Q 017172 199 TTAHVLLRGTVTANK--VANAVASSLCQMGIKVATICK-DDYEKLKL 242 (376)
Q Consensus 199 ~t~eVfL~G~~~~sK--v~~AiA~~LC~rgv~V~m~s~-~~~~~l~~ 242 (376)
.-+-++|.|.+|.-| ++.|||..|+++|.+|+.++- +-+..|+.
T Consensus 182 ~~~~Lll~G~~GtGKThLa~aIa~~l~~~g~~V~y~t~~~l~~~l~~ 228 (329)
T PRK06835 182 NNENLLFYGNTGTGKTFLSNCIAKELLDRGKSVIYRTADELIEILRE 228 (329)
T ss_pred cCCcEEEECCCCCcHHHHHHHHHHHHHHCCCeEEEEEHHHHHHHHHH
Confidence 347789999876557 999999999999999988544 44455654
No 302
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=57.65 E-value=43 Score=30.24 Aligned_cols=39 Identities=18% Similarity=0.231 Sum_probs=30.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee--chhHHHHHh
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLK 241 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~--s~~~~~~l~ 241 (376)
+.|++.|+.+ =+|.+++..+..+|++|..+ +.++.+.++
T Consensus 141 ~~vli~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 181 (323)
T cd08241 141 ETVLVLGAAG--GVGLAAVQLAKALGARVIAAASSEEKLALAR 181 (323)
T ss_pred CEEEEEcCCc--hHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH
Confidence 5889999864 79999999999999998883 445555554
No 303
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=57.02 E-value=16 Score=38.25 Aligned_cols=42 Identities=19% Similarity=0.260 Sum_probs=34.2
Q ss_pred hhhhhhcC---------CcCCceEEEeccCCchhHHHH--HHHHHhcCCcEEEeec
Q 017172 189 AAVVVNSL---------PKTTAHVLLRGTVTANKVANA--VASSLCQMGIKVATIC 233 (376)
Q Consensus 189 aAvVln~I---------P~~t~eVfL~G~~~~sKv~~A--iA~~LC~rgv~V~m~s 233 (376)
++.|.|+| ..|-|-|+.||+++ .+|.| ||.+| +.|..|+.++
T Consensus 21 ~~~v~~qi~~~~~~~~~~~ggK~aLVTGaSs--GIGlA~~IA~al-~~GA~Vi~v~ 73 (398)
T PRK13656 21 EANVKEQIEYVKAQGPIANGPKKVLVIGASS--GYGLASRIAAAF-GAGADTLGVF 73 (398)
T ss_pred HHHHHHHHHHHHhcCCcCCCCCEEEEECCCc--hHhHHHHHHHHH-HcCCeEEEEe
Confidence 45666666 35778999999994 99999 99999 9999987744
No 304
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=56.95 E-value=16 Score=35.29 Aligned_cols=41 Identities=20% Similarity=0.276 Sum_probs=30.7
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCc-EEEeech--hHHHHHhhc
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGI-KVATICK--DDYEKLKLR 243 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv-~V~m~s~--~~~~~l~~~ 243 (376)
-+.|++.|+. -.||||+.+|.+.|+ +|.+.++ ++-++|.++
T Consensus 125 ~k~vlvlGaG---Gaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~ 168 (282)
T TIGR01809 125 GFRGLVIGAG---GTSRAAVYALASLGVTDITVINRNPDKLSRLVDL 168 (282)
T ss_pred CceEEEEcCc---HHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHH
Confidence 4689999998 579999999999998 5777543 445555443
No 305
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=56.68 E-value=10 Score=38.25 Aligned_cols=29 Identities=21% Similarity=0.381 Sum_probs=26.7
Q ss_pred EEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 203 VLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
|++||+|+ =||++++..|++.|.+|.+++
T Consensus 1 IliTGgTG--lIG~~L~~~L~~~gh~v~ilt 29 (297)
T COG1090 1 ILITGGTG--LIGRALTARLRKGGHQVTILT 29 (297)
T ss_pred CeEecccc--chhHHHHHHHHhCCCeEEEEE
Confidence 58999998 999999999999999999954
No 306
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=56.63 E-value=14 Score=37.34 Aligned_cols=39 Identities=31% Similarity=0.351 Sum_probs=31.2
Q ss_pred CceEEEeccCCchh--HHHHHHHHHhcCCcEEEeechhHHH
Q 017172 200 TAHVLLRGTVTANK--VANAVASSLCQMGIKVATICKDDYE 238 (376)
Q Consensus 200 t~eVfL~G~~~~sK--v~~AiA~~LC~rgv~V~m~s~~~~~ 238 (376)
++=||++|+.|.-| ++.|+|.+|.+.|-+|+++|.|==+
T Consensus 2 ~riv~f~GKGGVGKTT~aaA~A~~lA~~g~kvLlvStDPAh 42 (322)
T COG0003 2 TRIVFFTGKGGVGKTTIAAATAVKLAESGKKVLLVSTDPAH 42 (322)
T ss_pred cEEEEEecCCcccHHHHHHHHHHHHHHcCCcEEEEEeCCCC
Confidence 34579998877667 9999999999999888888877333
No 307
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=56.36 E-value=18 Score=37.13 Aligned_cols=47 Identities=15% Similarity=0.150 Sum_probs=29.3
Q ss_pred EEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 179 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 179 vrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.||+|+.-..+..+. | +++.|.+||++ ++|+.|+....++..+|.+
T Consensus 159 ~~vv~g~~~~~~~l~~--~-~vd~V~fTGs~---~~g~~i~~~a~~~~~~~~l 205 (443)
T cd07132 159 YPVVLGGVEETTELLK--Q-RFDYIFYTGST---SVGKIVMQAAAKHLTPVTL 205 (443)
T ss_pred EEEEeCCHHHHHHHHh--C-CCCEEEEECCh---HHHHHHHHHHHhhCCceEE
Confidence 3456654333334443 4 67788888887 7888887776666666544
No 308
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=56.32 E-value=20 Score=34.62 Aligned_cols=51 Identities=18% Similarity=0.256 Sum_probs=38.2
Q ss_pred cEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcC-CcEEEe
Q 017172 178 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT 231 (376)
Q Consensus 178 rvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~r-gv~V~m 231 (376)
+..-|.|+.|+-.+.=....++ ..|||.|+.. .++...+..|.++ |++|+-
T Consensus 84 ~~~Rv~G~dl~~~ll~~~~~~~-~~v~llG~~~--~v~~~a~~~l~~~y~l~i~g 135 (243)
T PRK03692 84 QVSRVAGADLWEALMARAGKEG-TPVFLVGGKP--EVLAQTEAKLRTQWNVNIVG 135 (243)
T ss_pred CCCeeChHHHHHHHHHHHHhcC-CeEEEECCCH--HHHHHHHHHHHHHhCCEEEE
Confidence 3556778888877544444455 7899999994 8889999999876 888875
No 309
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=55.86 E-value=19 Score=35.86 Aligned_cols=38 Identities=18% Similarity=0.294 Sum_probs=30.7
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeec--hhHHHHHhh
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKL 242 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s--~~~~~~l~~ 242 (376)
.|++.|.. .+|+++|..|+++|++|.+++ .+..+.++.
T Consensus 2 ~viIiG~G---~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~ 41 (453)
T PRK09496 2 KIIIVGAG---QVGYTLAENLSGENNDVTVIDTDEERLRRLQD 41 (453)
T ss_pred EEEEECCC---HHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh
Confidence 58899985 999999999999999999953 455555543
No 310
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=55.84 E-value=23 Score=36.20 Aligned_cols=46 Identities=20% Similarity=0.281 Sum_probs=39.2
Q ss_pred CcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe--echhHHHHHhhcC
Q 017172 197 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 244 (376)
Q Consensus 197 P~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m--~s~~~~~~l~~~~ 244 (376)
|-+.|-||.||-- |=.|+.+|.+|-++|.+|.- ..++-=+.|+.+.
T Consensus 26 ~~~~k~VlITGCD--SGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~ 73 (322)
T KOG1610|consen 26 SLSDKAVLITGCD--SGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGET 73 (322)
T ss_pred ccCCcEEEEecCC--cHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhh
Confidence 3466789999999 58999999999999999988 5666778888886
No 311
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=55.60 E-value=19 Score=33.43 Aligned_cols=41 Identities=27% Similarity=0.307 Sum_probs=33.4
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeechhHHHHHhh
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKL 242 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~~~~l~~ 242 (376)
.-+.|++.|.. +||...|..|.+.|.+|++++++.-+.++.
T Consensus 9 ~~k~vLVIGgG---~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~ 49 (202)
T PRK06718 9 SNKRVVIVGGG---KVAGRRAITLLKYGAHIVVISPELTENLVK 49 (202)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHHCCCeEEEEcCCCCHHHHH
Confidence 44689999997 999999999999999999977654444443
No 312
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=55.33 E-value=24 Score=31.92 Aligned_cols=27 Identities=19% Similarity=0.331 Sum_probs=23.3
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
.|-..|+. -+|+.||..+++.|++|.+
T Consensus 1 ~V~ViGaG---~mG~~iA~~~a~~G~~V~l 27 (180)
T PF02737_consen 1 KVAVIGAG---TMGRGIAALFARAGYEVTL 27 (180)
T ss_dssp EEEEES-S---HHHHHHHHHHHHTTSEEEE
T ss_pred CEEEEcCC---HHHHHHHHHHHhCCCcEEE
Confidence 36677887 8999999999999999999
No 313
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=55.03 E-value=56 Score=29.33 Aligned_cols=44 Identities=14% Similarity=0.137 Sum_probs=32.3
Q ss_pred cCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEee--chhHHHHHh
Q 017172 195 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLK 241 (376)
Q Consensus 195 ~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~--s~~~~~~l~ 241 (376)
.+++| +.|++.|+.+ =+|.+++..+..+|++|.++ +.++.+.++
T Consensus 133 ~~~~g-~~vlI~g~~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 178 (320)
T cd05286 133 PVKPG-DTVLVHAAAG--GVGLLLTQWAKALGATVIGTVSSEEKAELAR 178 (320)
T ss_pred CCCCC-CEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence 34554 5799999864 58999988888999999883 445555553
No 314
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=54.74 E-value=16 Score=36.31 Aligned_cols=43 Identities=26% Similarity=0.336 Sum_probs=32.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe--echh---HHHHHhhcCc
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRIP 245 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m--~s~~---~~~~l~~~~p 245 (376)
|.|++||..+ =+|++.+.+|.+||++|+. .|.| ...+||..-|
T Consensus 6 Kna~vtggag--GIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p 53 (261)
T KOG4169|consen 6 KNALVTGGAG--GIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINP 53 (261)
T ss_pred ceEEEecCCc--hhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCC
Confidence 6789999985 8999999999999999988 3444 3444444433
No 315
>PRK11440 putative hydrolase; Provisional
Probab=54.31 E-value=1.4e+02 Score=26.75 Aligned_cols=33 Identities=18% Similarity=0.307 Sum_probs=28.9
Q ss_pred cCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 198 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 198 ~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
.|.++|+++|-.+ +=--.+.|..+.++|++|.+
T Consensus 119 ~gi~~lii~Gv~T-~~CV~~Ta~~A~~~gy~v~v 151 (188)
T PRK11440 119 RGIDTIVLCGIST-NIGVESTARNAWELGFNLVI 151 (188)
T ss_pred CCCCEEEEeeech-hHHHHHHHHHHHHCCCEEEE
Confidence 4889999999997 55567888999999999999
No 316
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=54.30 E-value=17 Score=33.51 Aligned_cols=29 Identities=31% Similarity=0.335 Sum_probs=23.9
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+|+..|+. =.|-+.|++|.|+|++|+++.
T Consensus 3 dV~IvGaG---~aGl~~A~~L~~~G~~v~i~E 31 (356)
T PF01494_consen 3 DVAIVGAG---PAGLAAALALARAGIDVTIIE 31 (356)
T ss_dssp EEEEE--S---HHHHHHHHHHHHTTCEEEEEE
T ss_pred eEEEECCC---HHHHHHHHHHHhcccccccch
Confidence 68888888 579999999999999999954
No 317
>PRK12320 hypothetical protein; Provisional
Probab=54.22 E-value=16 Score=40.62 Aligned_cols=30 Identities=23% Similarity=0.366 Sum_probs=27.4
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
.|++||+++ .||+.++..|.++|.+|..++
T Consensus 2 kILVTGAaG--FIGs~La~~Ll~~G~~Vi~ld 31 (699)
T PRK12320 2 QILVTDATG--AVGRSVTRQLIAAGHTVSGIA 31 (699)
T ss_pred EEEEECCCC--HHHHHHHHHHHhCCCEEEEEe
Confidence 589999997 999999999999999998854
No 318
>PRK06526 transposase; Provisional
Probab=54.01 E-value=11 Score=36.14 Aligned_cols=33 Identities=24% Similarity=0.350 Sum_probs=27.5
Q ss_pred ceEEEeccCCchh--HHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANK--VANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sK--v~~AiA~~LC~rgv~V~m~s 233 (376)
.-|+|.|.+|.-| ++.||+..+|++|.+|...+
T Consensus 99 ~nlll~Gp~GtGKThLa~al~~~a~~~g~~v~f~t 133 (254)
T PRK06526 99 ENVVFLGPPGTGKTHLAIGLGIRACQAGHRVLFAT 133 (254)
T ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHCCCchhhhh
Confidence 4588888777666 99999999999999998743
No 319
>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.
Probab=53.98 E-value=4.5 Score=29.06 Aligned_cols=9 Identities=56% Similarity=1.128 Sum_probs=6.8
Q ss_pred CCcchhhcc
Q 017172 1 MPIYDYIYG 9 (376)
Q Consensus 1 MPlyDyiyg 9 (376)
||+|||.--
T Consensus 1 MP~Yey~C~ 9 (42)
T PF09723_consen 1 MPIYEYRCE 9 (42)
T ss_pred CCCEEEEeC
Confidence 888888643
No 320
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=53.86 E-value=23 Score=33.83 Aligned_cols=39 Identities=13% Similarity=0.245 Sum_probs=31.4
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe--echhHHHHHhh
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 242 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m--~s~~~~~~l~~ 242 (376)
+.|-+.|.. .+|+++|..|+++|.+|.+ .+.+.-+.+++
T Consensus 2 ~~V~VIG~G---~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~ 42 (288)
T PRK09260 2 EKLVVVGAG---VMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQ 42 (288)
T ss_pred cEEEEECcc---HHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHH
Confidence 568889997 8999999999999999999 34555555543
No 321
>PRK06046 alanine dehydrogenase; Validated
Probab=53.84 E-value=69 Score=31.64 Aligned_cols=97 Identities=22% Similarity=0.265 Sum_probs=63.2
Q ss_pred HhcCCeEEeecccccccccccccceeeeccC-CCccEEEEcCCceeh-------hhhhhcC-CcCCceEEEeccCCchhH
Q 017172 144 DAKGVKVISLGLLNQGEELNRNGEIYLERQP-NKLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKV 214 (376)
Q Consensus 144 d~~GvKVlSLGlLNq~e~LN~~G~l~v~k~P-~~LrvrVVdGstLta-------AvVln~I-P~~t~eVfL~G~~~~sKv 214 (376)
+..|+|+++.--=|-.+.|-..--+++--.| +..-.=++||+.||+ |+-..-+ |++.+.|.+.|.. ..
T Consensus 64 ~~~g~K~~~~~p~N~~~glp~~~g~i~L~d~~tG~p~aild~~~lT~~RTaA~sala~~~La~~~~~~vgiiG~G---~q 140 (326)
T PRK06046 64 DIAGVKIVNVHPGNPDRGLPTVMAVIILNSPETGFPLAIMDGTYLTDMRTGAAGGVAAKYLARKDSKVVGIIGAG---NQ 140 (326)
T ss_pred CeEEEEEEeeCCCCcccCCCceeEEEEEEeCCCCceEEEEcCccHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HH
Confidence 3579999987655654444432223333333 245567889999974 2223445 7899999999998 78
Q ss_pred HHHHHHHHh-cCCcEEEe---echhHHHHHhhc
Q 017172 215 ANAVASSLC-QMGIKVAT---ICKDDYEKLKLR 243 (376)
Q Consensus 215 ~~AiA~~LC-~rgv~V~m---~s~~~~~~l~~~ 243 (376)
|++.+.+|+ .++++.+. -+.++-+.+..+
T Consensus 141 a~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~ 173 (326)
T PRK06046 141 ARTQLLALSEVFDLEEVRVYDRTKSSAEKFVER 173 (326)
T ss_pred HHHHHHHHHhhCCceEEEEECCCHHHHHHHHHH
Confidence 999999998 45777666 233444444444
No 322
>PRK05642 DNA replication initiation factor; Validated
Probab=53.63 E-value=19 Score=33.79 Aligned_cols=38 Identities=13% Similarity=0.102 Sum_probs=30.7
Q ss_pred ceEEEeccCCchh--HHHHHHHHHhcCCcEEEeechhHHH
Q 017172 201 AHVLLRGTVTANK--VANAVASSLCQMGIKVATICKDDYE 238 (376)
Q Consensus 201 ~eVfL~G~~~~sK--v~~AiA~~LC~rgv~V~m~s~~~~~ 238 (376)
..++|.|..|.=| ++.|+|.+++++|.+|+.++.+++.
T Consensus 46 ~~l~l~G~~G~GKTHLl~a~~~~~~~~~~~v~y~~~~~~~ 85 (234)
T PRK05642 46 SLIYLWGKDGVGRSHLLQAACLRFEQRGEPAVYLPLAELL 85 (234)
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHhCCCcEEEeeHHHHH
Confidence 4689988876446 8999999999999999887777654
No 323
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=53.61 E-value=16 Score=36.54 Aligned_cols=30 Identities=30% Similarity=0.317 Sum_probs=27.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|+++|.. +.|+++|.+|.++|.+|...+
T Consensus 6 k~v~v~G~g---~~G~s~a~~l~~~G~~V~~~d 35 (447)
T PRK02472 6 KKVLVLGLA---KSGYAAAKLLHKLGANVTVND 35 (447)
T ss_pred CEEEEEeeC---HHHHHHHHHHHHCCCEEEEEc
Confidence 578999998 699999999999999999943
No 324
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=53.59 E-value=23 Score=36.67 Aligned_cols=87 Identities=20% Similarity=0.107 Sum_probs=51.3
Q ss_pred HHHHHhcCCeEEeecccccccccccccceeeeccCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHH
Q 017172 140 ILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVA 219 (376)
Q Consensus 140 Il~Ad~~GvKVlSLGlLNq~e~LN~~G~l~v~k~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA 219 (376)
|.-|=+.|--||=-.--.-...-..=.+++-.--| .=-+.+|+|+.-.+...|-+ .++.+-|++||++ .+|+.|+
T Consensus 157 i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~lP-~gvv~~v~g~~~~~~~~L~~-~~~v~~V~fTGs~---~~g~~i~ 231 (480)
T cd07559 157 LAPALAAGNTVVLKPASQTPLSILVLMELIGDLLP-KGVVNVVTGFGSEAGKPLAS-HPRIAKLAFTGST---TVGRLIM 231 (480)
T ss_pred HHHHHHcCCEEEEECchhhhHHHHHHHHHHHHhCC-cCeEEEEecCchHHHHHHhc-CCCCCEEEEECcH---HHHHHHH
Confidence 34556667666532211111111111223333357 55689999865322222222 3478999999999 8999999
Q ss_pred HHHhcCCcEEEe
Q 017172 220 SSLCQMGIKVAT 231 (376)
Q Consensus 220 ~~LC~rgv~V~m 231 (376)
.+..++.++|++
T Consensus 232 ~~aa~~~~p~~l 243 (480)
T cd07559 232 QYAAENLIPVTL 243 (480)
T ss_pred HHHhccCCcEEe
Confidence 998888888764
No 325
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=53.42 E-value=19 Score=38.81 Aligned_cols=46 Identities=20% Similarity=0.281 Sum_probs=37.3
Q ss_pred cCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe--echhHHHHHhhc
Q 017172 195 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 243 (376)
Q Consensus 195 ~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m--~s~~~~~~l~~~ 243 (376)
+|++..++|++.|-. ++|+.+|..|.++|++|++ .+.++-+.++++
T Consensus 395 ~~~~~~~~vII~G~G---r~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~ 442 (621)
T PRK03562 395 EIDEQQPRVIIAGFG---RFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKF 442 (621)
T ss_pred ccccccCcEEEEecC---hHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhc
Confidence 455556899999998 9999999999999999988 455677767653
No 326
>PRK08727 hypothetical protein; Validated
Probab=53.41 E-value=20 Score=33.54 Aligned_cols=36 Identities=22% Similarity=0.208 Sum_probs=29.3
Q ss_pred ceEEEeccCCchh--HHHHHHHHHhcCCcEEEeechhH
Q 017172 201 AHVLLRGTVTANK--VANAVASSLCQMGIKVATICKDD 236 (376)
Q Consensus 201 ~eVfL~G~~~~sK--v~~AiA~~LC~rgv~V~m~s~~~ 236 (376)
.-++|.|.+|.=| ++.|+|.++|++|.+|..++-++
T Consensus 42 ~~l~l~G~~G~GKThL~~a~~~~~~~~~~~~~y~~~~~ 79 (233)
T PRK08727 42 DWLYLSGPAGTGKTHLALALCAAAEQAGRSSAYLPLQA 79 (233)
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEEeHHH
Confidence 3489999887556 89999999999999998865444
No 327
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=52.98 E-value=27 Score=35.97 Aligned_cols=54 Identities=17% Similarity=0.181 Sum_probs=37.1
Q ss_pred cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhc-CCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQ-MGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~-rgv~V~m 231 (376)
.| .=-+.+|.|+.-.+...|-+=| +++-|++||++ .+|+.|+.+..+ +..+|++
T Consensus 196 lP-~gvv~~v~g~~~~~~~~L~~~~-~v~~v~fTGs~---~~G~~v~~~aa~~~~~~v~l 250 (476)
T cd07142 196 LP-DGVLNIVTGFGPTAGAAIASHM-DVDKVAFTGST---EVGKIIMQLAAKSNLKPVTL 250 (476)
T ss_pred cC-cccEEEEeCCchhHHHHHhcCC-CCCEEEEECcH---HHHHHHHHHHHHcCCCeEEE
Confidence 46 5568888886544444443333 47788999988 788888888776 6667755
No 328
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=52.94 E-value=20 Score=37.03 Aligned_cols=38 Identities=24% Similarity=0.427 Sum_probs=31.5
Q ss_pred hhcCCc-CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 193 VNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 193 ln~IP~-~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
|..+|+ ..+.|++.|.. +.|+|+|.+|.++|.+|...+
T Consensus 7 ~~~~~~~~~~~v~v~G~G---~sG~a~a~~L~~~G~~V~~~D 45 (473)
T PRK00141 7 LSALPQELSGRVLVAGAG---VSGRGIAAMLSELGCDVVVAD 45 (473)
T ss_pred hhhcccccCCeEEEEccC---HHHHHHHHHHHHCCCEEEEEC
Confidence 444555 66789999977 899999999999999999954
No 329
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=52.68 E-value=21 Score=34.71 Aligned_cols=32 Identities=22% Similarity=0.298 Sum_probs=27.1
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCc-EEEeech
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGI-KVATICK 234 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv-~V~m~s~ 234 (376)
-+.|++.|+. -+|+|+|.+|.+.|+ +|.++++
T Consensus 127 ~k~vlIlGaG---Gaaraia~aL~~~G~~~I~I~nR 159 (284)
T PRK12549 127 LERVVQLGAG---GAGAAVAHALLTLGVERLTIFDV 159 (284)
T ss_pred CCEEEEECCc---HHHHHHHHHHHHcCCCEEEEECC
Confidence 3789999999 589999999999999 6777544
No 330
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=52.56 E-value=23 Score=32.24 Aligned_cols=35 Identities=31% Similarity=0.409 Sum_probs=27.7
Q ss_pred EEEeccCCchh--HHHHHHHHHhcCCcEEEeechhHH
Q 017172 203 VLLRGTVTANK--VANAVASSLCQMGIKVATICKDDY 237 (376)
Q Consensus 203 VfL~G~~~~sK--v~~AiA~~LC~rgv~V~m~s~~~~ 237 (376)
|+|||-.++-| ||+++...|-++|++|.++..|..
T Consensus 5 IwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD~l 41 (156)
T PF01583_consen 5 IWLTGLSGSGKTTLARALERRLFARGIKVYLLDGDNL 41 (156)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCcch
Confidence 67888776556 999999999999999999765543
No 331
>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA). This ATPase is involved in transport of arsenite, antimonite or other oxyanions across biological membranes in all three kingdoms of life. ArsA contains a highly conserved AAA motif present in the AAA+ ATPase superfamily associated with a variety of cellular activities. To form a functional ATP-driven pump, ArsA interacts with the permease ArsB, which is a channel-forming integral membrane protein. One of the most interesting features of ArsA is the allosteric activation by its transport substrates. A divalent cation, typically Mg2+, is required for its enzymatic activity.
Probab=52.50 E-value=15 Score=34.84 Aligned_cols=38 Identities=26% Similarity=0.378 Sum_probs=28.8
Q ss_pred EEEeccCCchh--HHHHHHHHHhcCCcEEEeechhHHHHH
Q 017172 203 VLLRGTVTANK--VANAVASSLCQMGIKVATICKDDYEKL 240 (376)
Q Consensus 203 VfL~G~~~~sK--v~~AiA~~LC~rgv~V~m~s~~~~~~l 240 (376)
+|++|+.+.-| ++.++|.+++++|.+|++++.|--.+|
T Consensus 3 ~~~~gkgG~GKtt~a~~la~~~a~~g~~vLlvd~D~~~sl 42 (254)
T cd00550 3 IFFGGKGGVGKTTISAATAVRLAEQGKKVLLVSTDPAHSL 42 (254)
T ss_pred EEEECCCCchHHHHHHHHHHHHHHCCCCceEEeCCCcccH
Confidence 57777665445 889999999999999999776643444
No 332
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=52.31 E-value=21 Score=30.38 Aligned_cols=28 Identities=18% Similarity=0.358 Sum_probs=25.0
Q ss_pred eEEEeccCCchhHHHHHHHHHhc-CCcEEEe
Q 017172 202 HVLLRGTVTANKVANAVASSLCQ-MGIKVAT 231 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~-rgv~V~m 231 (376)
.|.+.|.++ |+|++|+.++-+ +|+++.-
T Consensus 2 rV~i~G~~G--rMG~~i~~~i~~~~~~~lv~ 30 (124)
T PF01113_consen 2 RVGIVGASG--RMGRAIAEAILESPGFELVG 30 (124)
T ss_dssp EEEEETTTS--HHHHHHHHHHHHSTTEEEEE
T ss_pred EEEEECCCC--HHHHHHHHHHHhcCCcEEEE
Confidence 488999987 999999999997 7999776
No 333
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=52.03 E-value=19 Score=38.42 Aligned_cols=33 Identities=24% Similarity=0.369 Sum_probs=28.6
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcC--CcEEEeech
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQM--GIKVATICK 234 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~r--gv~V~m~s~ 234 (376)
.+.||+||+++ =||+.++.+|.++ |++|+.+++
T Consensus 6 ~~~VLVTGatG--fIG~~lv~~Ll~~g~~~~V~~~d~ 40 (668)
T PLN02260 6 PKNILITGAAG--FIASHVANRLIRNYPDYKIVVLDK 40 (668)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHhCCCCEEEEEeC
Confidence 47899999997 9999999999988 788887543
No 334
>PRK06921 hypothetical protein; Provisional
Probab=51.84 E-value=26 Score=33.87 Aligned_cols=44 Identities=23% Similarity=0.291 Sum_probs=33.8
Q ss_pred CCceEEEeccCCchh--HHHHHHHHHhcC-CcEEEeec-hhHHHHHhh
Q 017172 199 TTAHVLLRGTVTANK--VANAVASSLCQM-GIKVATIC-KDDYEKLKL 242 (376)
Q Consensus 199 ~t~eVfL~G~~~~sK--v~~AiA~~LC~r-gv~V~m~s-~~~~~~l~~ 242 (376)
...-++|.|.+|.-| ++.|||..|+++ |+.|+-++ .+.+..|+.
T Consensus 116 ~~~~l~l~G~~G~GKThLa~aia~~l~~~~g~~v~y~~~~~l~~~l~~ 163 (266)
T PRK06921 116 RKNSIALLGQPGSGKTHLLTAAANELMRKKGVPVLYFPFVEGFGDLKD 163 (266)
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHhhhcCceEEEEEHHHHHHHHHH
Confidence 345789999887667 899999999998 99998744 345565544
No 335
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=51.70 E-value=28 Score=35.52 Aligned_cols=50 Identities=24% Similarity=0.225 Sum_probs=30.5
Q ss_pred cEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 178 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 178 rvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
-+.+|+|..-.+.--|-+ .++.+-|++||.+ .+|+.|+....+++.+|.+
T Consensus 182 ~~~~v~g~~~~~~~~l~~-~~~v~~V~fTGs~---~~g~~i~~~aa~~~~~v~l 231 (456)
T cd07145 182 VINVVTGYGSEVGDEIVT-NPKVNMISFTGST---AVGLLIASKAGGTGKKVAL 231 (456)
T ss_pred cEEEEeCCCchHHHHHhc-CCCCCEEEEECCH---HHHHHHHHHHhhcCCceEE
Confidence 367777743221111111 1367778888877 6888888877777777644
No 336
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=51.69 E-value=24 Score=36.64 Aligned_cols=48 Identities=17% Similarity=0.260 Sum_probs=25.7
Q ss_pred cEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 178 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 178 rvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
-+.+|+|+.=..+..++. | ++-|.+||++ ++|+.|+....++..+|.+
T Consensus 158 v~~~v~g~~~~~~~L~~~-~--v~~V~fTGS~---~~g~~i~~~aa~~~~~v~l 205 (449)
T cd07136 158 YVAVVEGGVEENQELLDQ-K--FDYIFFTGSV---RVGKIVMEAAAKHLTPVTL 205 (449)
T ss_pred EEEEEeCChHHHHHHhcC-C--CCEEEEECCH---HHHHHHHHHHHhcCCCEEE
Confidence 345555533223333331 2 6667777766 6677776666555555544
No 337
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=51.59 E-value=12 Score=36.50 Aligned_cols=56 Identities=25% Similarity=0.306 Sum_probs=35.6
Q ss_pred cCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcE-EEeechh--HHHHHhh
Q 017172 183 DGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VATICKD--DYEKLKL 242 (376)
Q Consensus 183 dGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~-V~m~s~~--~~~~l~~ 242 (376)
||.....+.--..++. .+.|++.|+.+ .||||+.+|.+.|++ |.+.+++ +-+.|.+
T Consensus 106 D~~Gf~~~L~~~~~~~-~~~vlilGaGG---aarAi~~aL~~~g~~~i~i~nR~~~~a~~la~ 164 (272)
T PRK12550 106 DYIAIAKLLASYQVPP-DLVVALRGSGG---MAKAVAAALRDAGFTDGTIVARNEKTGKALAE 164 (272)
T ss_pred CHHHHHHHHHhcCCCC-CCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH
Confidence 4444444332223332 25799999986 599999999999985 7775443 4444443
No 338
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=51.50 E-value=24 Score=37.43 Aligned_cols=41 Identities=15% Similarity=0.137 Sum_probs=31.6
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeech--hHHHHHhhc
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICK--DDYEKLKLR 243 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~--~~~~~l~~~ 243 (376)
-+.|+++|+. -+|+|||.+|.++|.+|.++++ ++-+.+..+
T Consensus 379 ~k~vlIlGaG---GagrAia~~L~~~G~~V~i~nR~~e~a~~la~~ 421 (529)
T PLN02520 379 GKLFVVIGAG---GAGKALAYGAKEKGARVVIANRTYERAKELADA 421 (529)
T ss_pred CCEEEEECCc---HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 4689999996 5899999999999999988543 344444433
No 339
>PRK06940 short chain dehydrogenase; Provisional
Probab=51.49 E-value=29 Score=32.41 Aligned_cols=28 Identities=25% Similarity=0.277 Sum_probs=23.2
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
-|++||+ + =+|+++|..|. +|.+|++.+
T Consensus 4 ~~lItGa-~--gIG~~la~~l~-~G~~Vv~~~ 31 (275)
T PRK06940 4 VVVVIGA-G--GIGQAIARRVG-AGKKVLLAD 31 (275)
T ss_pred EEEEECC-C--hHHHHHHHHHh-CCCEEEEEe
Confidence 4688887 3 69999999996 899999843
No 340
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=51.46 E-value=28 Score=36.42 Aligned_cols=54 Identities=20% Similarity=0.218 Sum_probs=37.3
Q ss_pred cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHh-cCCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC-~rgv~V~m 231 (376)
-| .=-+.+|+|+.-.+...|-+= ++++-|++||.+ .+|+.|+.+.+ ++..+|.+
T Consensus 213 lP-~gvv~~v~g~~~~~~~~L~~~-p~v~~V~FTGS~---~~G~~i~~~aa~~~l~~~~l 267 (501)
T PLN02766 213 VP-DGVINVVTGFGPTAGAAIASH-MDVDKVSFTGST---EVGRKIMQAAATSNLKQVSL 267 (501)
T ss_pred CC-cCcEEEEecCchHHHHHHhcC-CCCCEEEEECcH---HHHHHHHHHhhhcCCCeEEE
Confidence 46 445889998654433333322 358889999998 89999999887 46667655
No 341
>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1.1.99.5 from EC), Sarcosine oxidase beta subunit (1.5.3.1 from EC), D-alanine oxidase (1.4.99.1 from EC), D-aspartate oxidase (1.4.3.1 from EC). D-amino acid oxidase (1.4.3.3 from EC) (DAMOX or DAO) is an FAD flavoenzyme that catalyzes the oxidation of neutral and basic D-amino acids into their corresponding keto acids. DAOs have been characterised and sequenced in fungi and vertebrates where they are known to be located in the peroxisomes. D-aspartate oxidase (1.4.3.1 from EC) (DASOX) [] is an enzyme, structurally related to DAO, which catalyzes the same reaction but is active only toward dicarboxylic D-amino acids. In DAO, a conserved histidine has been shown [] to be important for the enzyme's catalytic activity.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2RGO_A 3NYE_A 3NYF_A 3NYC_A 3SM8_A 3SGL_A 3PVC_A 3DME_A 2GAH_B 3NLC_A ....
Probab=51.23 E-value=22 Score=32.84 Aligned_cols=31 Identities=19% Similarity=0.231 Sum_probs=26.2
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeechh
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATICKD 235 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~ 235 (376)
+|...|+. =+|.++|.+|.++|.+|+++.++
T Consensus 1 DvvIIGaG---i~G~~~A~~La~~G~~V~l~e~~ 31 (358)
T PF01266_consen 1 DVVIIGAG---IAGLSTAYELARRGHSVTLLERG 31 (358)
T ss_dssp EEEEECTS---HHHHHHHHHHHHTTSEEEEEESS
T ss_pred CEEEECcC---HHHHHHHHHHHHCCCeEEEEeec
Confidence 46778887 68999999999999999996544
No 342
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=51.13 E-value=19 Score=34.51 Aligned_cols=31 Identities=13% Similarity=0.177 Sum_probs=26.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcC-CcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQM-GIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~r-gv~V~m~s 233 (376)
+.|++||+++ =||+.++..|.++ |.+|..++
T Consensus 2 ~~ilVtGatG--fiGs~l~~~L~~~~~~~V~~~~ 33 (347)
T PRK11908 2 KKVLILGVNG--FIGHHLSKRILETTDWEVYGMD 33 (347)
T ss_pred cEEEEECCCc--HHHHHHHHHHHhCCCCeEEEEe
Confidence 4699999997 8999999999876 79988743
No 343
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=51.08 E-value=18 Score=33.53 Aligned_cols=20 Identities=30% Similarity=0.415 Sum_probs=18.1
Q ss_pred hHHHHHHHHHhcCCcEEEee
Q 017172 213 KVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 213 Kv~~AiA~~LC~rgv~V~m~ 232 (376)
|.|.+||.++++||..|+++
T Consensus 30 ~~G~~lA~~~~~~Ga~V~li 49 (185)
T PF04127_consen 30 KMGAALAEEAARRGAEVTLI 49 (185)
T ss_dssp HHHHHHHHHHHHTT-EEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEE
Confidence 99999999999999999994
No 344
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=50.93 E-value=21 Score=32.03 Aligned_cols=41 Identities=20% Similarity=0.255 Sum_probs=30.5
Q ss_pred hhhhcC--CcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 191 VVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 191 vVln~I--P~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
.+.+.+ ++.-+=++|+|..+--=-|.++|.+|+++|++|.+
T Consensus 15 ~i~~~~~~~~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v 57 (169)
T PF03853_consen 15 LIRKLFGSPKGPRVLILCGPGNNGGDGLVAARHLANRGYNVTV 57 (169)
T ss_dssp HHHHHSTCCTT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhcccCCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEE
Confidence 556667 67777888998764123688999999999999998
No 345
>PRK08116 hypothetical protein; Validated
Probab=50.89 E-value=28 Score=33.61 Aligned_cols=42 Identities=26% Similarity=0.364 Sum_probs=31.7
Q ss_pred eEEEeccCCchh--HHHHHHHHHhcCCcEEEeechh-HHHHHhhc
Q 017172 202 HVLLRGTVTANK--VANAVASSLCQMGIKVATICKD-DYEKLKLR 243 (376)
Q Consensus 202 eVfL~G~~~~sK--v~~AiA~~LC~rgv~V~m~s~~-~~~~l~~~ 243 (376)
-++|.|..|.-| ++.|||.+|+++|..|+.++-. -...++..
T Consensus 116 gl~l~G~~GtGKThLa~aia~~l~~~~~~v~~~~~~~ll~~i~~~ 160 (268)
T PRK08116 116 GLLLWGSVGTGKTYLAACIANELIEKGVPVIFVNFPQLLNRIKST 160 (268)
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHH
Confidence 389999876556 9999999999999999885533 34455543
No 346
>TIGR02032 GG-red-SF geranylgeranyl reductase family. This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates.
Probab=50.61 E-value=18 Score=32.79 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=27.3
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeechhHH
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY 237 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~~ 237 (376)
+|+..|+. =-|-+.|..|.++|++|+++.+..+
T Consensus 2 dv~IiGaG---~aGl~~A~~l~~~g~~v~vie~~~~ 34 (295)
T TIGR02032 2 DVVVVGAG---PAGASAAYRLADKGLRVLLLEKKSF 34 (295)
T ss_pred CEEEECCC---HHHHHHHHHHHHCCCeEEEEeccCC
Confidence 47888887 5699999999999999999765543
No 347
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=49.89 E-value=32 Score=32.83 Aligned_cols=30 Identities=13% Similarity=0.256 Sum_probs=27.0
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
.+.|-+.|+. .+|.+||..|+++|.+|.+.
T Consensus 3 i~~I~ViGaG---~mG~~iA~~la~~G~~V~l~ 32 (291)
T PRK06035 3 IKVIGVVGSG---VMGQGIAQVFARTGYDVTIV 32 (291)
T ss_pred CcEEEEECcc---HHHHHHHHHHHhcCCeEEEE
Confidence 3678899998 89999999999999999993
No 348
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=49.80 E-value=23 Score=35.45 Aligned_cols=34 Identities=21% Similarity=0.361 Sum_probs=26.9
Q ss_pred EEEeccCCchhHHHHHHHHHhcCCc-EEEeechhHHH
Q 017172 203 VLLRGTVTANKVANAVASSLCQMGI-KVATICKDDYE 238 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rgv-~V~m~s~~~~~ 238 (376)
|+.||+++ =+|+.++..|++.+. ++++++.+++.
T Consensus 1 VLVTGa~G--SIGseL~rql~~~~p~~lil~d~~E~~ 35 (293)
T PF02719_consen 1 VLVTGAGG--SIGSELVRQLLRYGPKKLILFDRDENK 35 (293)
T ss_dssp EEEETTTS--HHHHHHHHHHHCCB-SEEEEEES-HHH
T ss_pred CEEEcccc--HHHHHHHHHHHhcCCCeEEEeCCChhH
Confidence 78999998 799999999999997 46666766554
No 349
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=49.76 E-value=33 Score=34.95 Aligned_cols=53 Identities=17% Similarity=0.168 Sum_probs=30.8
Q ss_pred CCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 174 PNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 174 P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
| .=-+.+|+|..-.+.-.|-+- ++++-|++||.+ ++|+.|+....++..+|.+
T Consensus 176 P-~gvv~~v~g~~~~~~~~L~~~-~~v~~V~fTGs~---~~g~~v~~~aa~~~~~~~l 228 (456)
T cd07110 176 P-PGVLNVVTGTGDEAGAPLAAH-PGIDKISFTGST---ATGSQVMQAAAQDIKPVSL 228 (456)
T ss_pred C-CCcEEEEecCchHHHHHHhcC-CCCCEEEEECCH---HHHHHHHHHHhhcCCeEEE
Confidence 5 334777777543222222221 366777888877 7777777766666666654
No 350
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=49.59 E-value=16 Score=33.77 Aligned_cols=28 Identities=14% Similarity=0.410 Sum_probs=24.5
Q ss_pred EEEeccCCchhHHHHHHHHHhcCCc-EEEee
Q 017172 203 VLLRGTVTANKVANAVASSLCQMGI-KVATI 232 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rgv-~V~m~ 232 (376)
||+||+++ =||++++..|.++|. .|+.+
T Consensus 1 ilItGatG--~iG~~l~~~L~~~g~~~v~~~ 29 (314)
T TIGR02197 1 IIVTGGAG--FIGSNLVKALNERGITDILVV 29 (314)
T ss_pred CEEeCCcc--hhhHHHHHHHHHcCCceEEEE
Confidence 68999997 799999999999997 57663
No 351
>COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane]
Probab=49.58 E-value=4.7 Score=40.92 Aligned_cols=127 Identities=20% Similarity=0.317 Sum_probs=84.1
Q ss_pred EEeecccccccccccccce--eeeccCCCccEEEEcCCceehhhhhhcCCc-CCceEEEeccCCchhHHHHHHHHHhc-C
Q 017172 150 VISLGLLNQGEELNRNGEI--YLERQPNKLKIKVVDGSSLAAAVVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQ-M 225 (376)
Q Consensus 150 VlSLGlLNq~e~LN~~G~l--~v~k~P~~LrvrVVdGstLtaAvVln~IP~-~t~eVfL~G~~~~sKv~~AiA~~LC~-r 225 (376)
++-||.. ..||+..--- |.+-.| |..|.=-...|+||=|+|+.+. +...||..-.. -|.++-||.+.|+ |
T Consensus 101 L~DLGVS--S~QLD~~eRGFSf~~d~p--LDMRMd~~~~lsA~evvN~~~e~~L~~I~~~yGE--Er~arrIA~aIv~~R 174 (314)
T COG0275 101 LLDLGVS--SPQLDDAERGFSFRKDGP--LDMRMDQTQGLSAAEVVNTYSEEDLARIFKEYGE--ERFAKRIARAIVERR 174 (314)
T ss_pred EEeccCC--ccccCCCcCCcccCCCCC--cccCcCCCCCCCHHHHHhcCCHHHHHHHHHHhcc--HhhHHHHHHHHHHHh
Confidence 3455543 4555555344 445557 8888777999999999999996 88899998544 2999999999996 5
Q ss_pred CcEEEeechhHHHHHhhcCchhhccceeeec--ccccCcceEEEE------cCCCCHHHhhcCCCCc
Q 017172 226 GIKVATICKDDYEKLKLRIPVEAQHNLVLST--SYAAHKTKIWLV------GDDLTGKEQARAPKGT 284 (376)
Q Consensus 226 gv~V~m~s~~~~~~l~~~~p~~~~~~Lv~~t--~y~a~~~K~WlV------G~~l~~~eQ~~Ap~Gt 284 (376)
..+=...-.|--+-|++-+|.-....-.|+- .||| .+|.+= -+.|...+..-+|.|-
T Consensus 175 ~~~pi~tT~eLaeiI~~~~p~~~~~k~~hPAtr~FQA--iRI~VNdEL~~L~~~L~~a~~~L~~gGR 239 (314)
T COG0275 175 KKKPIETTKELAEIIKSAIPAKEKRKKIHPATRTFQA--IRIYVNDELEELEEALEAALDLLKPGGR 239 (314)
T ss_pred ccCCCccHHHHHHHHHHhCCchhcccCCCcchhhhhh--heeeehhHHHHHHHHHHHHHHhhCCCcE
Confidence 5555443556667777778865555445444 6876 244442 2234444555677774
No 352
>cd01012 YcaC_related YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.
Probab=49.47 E-value=70 Score=27.87 Aligned_cols=90 Identities=16% Similarity=0.090 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHhcCCeEEeecccccccccccccceee--ec-cCCCcc-----EEEEcCCceehhhhhhcCCcCCceE
Q 017172 132 INSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYL--ER-QPNKLK-----IKVVDGSSLAAAVVVNSLPKTTAHV 203 (376)
Q Consensus 132 IN~lIE~AIl~Ad~~GvKVlSLGlLNq~e~LN~~G~l~v--~k-~P~~Lr-----vrVVdGstLtaAvVln~IP~~t~eV 203 (376)
+=.-|.+.|..|.+.|+.|+-..- .. .+.|++.= .. .|++.- .--..|+.|.. .|.. .|.+++
T Consensus 21 ~~~~i~~l~~~ar~~g~pVi~~~~---~~--~~~g~~~~~l~~~~~~~~vi~K~~~saf~~t~L~~--~L~~--~gi~~l 91 (157)
T cd01012 21 LINNTVKLAKAAKLLDVPVILTEQ---YP--KGLGPTVPELREVFPDAPVIEKTSFSCWEDEAFRK--ALKA--TGRKQV 91 (157)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEee---CC--CCCCCchHHHHhhCCCCCceecccccCcCCHHHHH--HHHh--cCCCEE
Confidence 333455666678889999996521 11 12233221 11 221100 01122222322 2332 488999
Q ss_pred EEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 204 LLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 204 fL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+++|-.+ +=--.+.|..+.++|++|.+
T Consensus 92 ii~G~~T-~~CV~~Ta~~a~~~g~~v~v 118 (157)
T cd01012 92 VLAGLET-HVCVLQTALDLLEEGYEVFV 118 (157)
T ss_pred EEEEeec-cHHHHHHHHHHHHCCCEEEE
Confidence 9999997 55557888889999999999
No 353
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=49.34 E-value=27 Score=34.21 Aligned_cols=32 Identities=22% Similarity=0.309 Sum_probs=28.1
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
-+.|++.|.. .+|++++..|.+.|.+|.++++
T Consensus 152 g~kvlViG~G---~iG~~~a~~L~~~Ga~V~v~~r 183 (296)
T PRK08306 152 GSNVLVLGFG---RTGMTLARTLKALGANVTVGAR 183 (296)
T ss_pred CCEEEEECCc---HHHHHHHHHHHHCCCEEEEEEC
Confidence 4799999986 7999999999999999999543
No 354
>cd01014 nicotinamidase_related Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.
Probab=49.03 E-value=92 Score=27.08 Aligned_cols=33 Identities=18% Similarity=0.362 Sum_probs=28.0
Q ss_pred cCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 198 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 198 ~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
.|.++|+++|-.+ +=--.+.|..+.++|++|.+
T Consensus 97 ~gi~~viv~G~~t-d~CV~~Ta~~a~~~g~~v~v 129 (155)
T cd01014 97 AGIDHLVICGAMT-EMCVDTTVRSAFDLGYDVTV 129 (155)
T ss_pred CCCCEEEEEeecc-chhHHHHHHHHHHCCCcEEE
Confidence 3779999999886 55557788899999999999
No 355
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=48.90 E-value=19 Score=29.64 Aligned_cols=28 Identities=21% Similarity=0.157 Sum_probs=21.2
Q ss_pred HHHHHHHHhcCCcEEEeechhHHHHHhh
Q 017172 215 ANAVASSLCQMGIKVATICKDDYEKLKL 242 (376)
Q Consensus 215 ~~AiA~~LC~rgv~V~m~s~~~~~~l~~ 242 (376)
.-|||.+|.+||.+|.+...++|+..-.
T Consensus 15 ~lala~~L~~rGh~V~~~~~~~~~~~v~ 42 (139)
T PF03033_consen 15 FLALARALRRRGHEVRLATPPDFRERVE 42 (139)
T ss_dssp HHHHHHHHHHTT-EEEEEETGGGHHHHH
T ss_pred HHHHHHHHhccCCeEEEeecccceeccc
Confidence 4689999999999999967667765543
No 356
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated
Probab=48.82 E-value=26 Score=34.25 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=29.7
Q ss_pred cCCceEEEeccCCchhHHHHHHHHHhcCCcEEEeechh
Q 017172 198 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD 235 (376)
Q Consensus 198 ~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~ 235 (376)
+...+|+..|+. =+|-+.|.+|.++|++|+++.+.
T Consensus 4 ~~~~dV~IvGaG---~aGl~~A~~La~~G~~v~liE~~ 38 (392)
T PRK08773 4 RSRRDAVIVGGG---VVGAACALALADAGLSVALVEGR 38 (392)
T ss_pred CCCCCEEEECcC---HHHHHHHHHHhcCCCEEEEEeCC
Confidence 455689999998 68999999999999999996544
No 357
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=48.69 E-value=36 Score=31.32 Aligned_cols=39 Identities=15% Similarity=0.170 Sum_probs=28.4
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeec--hhHHHHHhh
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKL 242 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s--~~~~~~l~~ 242 (376)
.|-+.|.++ .+|.++|..|+++|.+|.+.+ .++.+.+.+
T Consensus 2 kI~IIGG~G--~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~ 42 (219)
T TIGR01915 2 KIAVLGGTG--DQGKGLALRLAKAGNKIIIGSRDLEKAEEAAA 42 (219)
T ss_pred EEEEEcCCC--HHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHH
Confidence 367787554 899999999999999998843 334444433
No 358
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=48.33 E-value=40 Score=28.41 Aligned_cols=38 Identities=24% Similarity=0.392 Sum_probs=30.2
Q ss_pred EEEeccCCchhHHHHHHHHHhcCCcEEEeechh-HHHHHhhc
Q 017172 203 VLLRGTVTANKVANAVASSLCQMGIKVATICKD-DYEKLKLR 243 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~-~~~~l~~~ 243 (376)
|.+.|+. =+|..+|-.|++.|.+|.++.+. +++.++++
T Consensus 1 I~I~G~G---aiG~~~a~~L~~~g~~V~l~~r~~~~~~~~~~ 39 (151)
T PF02558_consen 1 ILIIGAG---AIGSLYAARLAQAGHDVTLVSRSPRLEAIKEQ 39 (151)
T ss_dssp EEEESTS---HHHHHHHHHHHHTTCEEEEEESHHHHHHHHHH
T ss_pred CEEECcC---HHHHHHHHHHHHCCCceEEEEccccHHhhhhe
Confidence 4567777 48999999999999999995444 57877765
No 359
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=47.98 E-value=33 Score=35.11 Aligned_cols=47 Identities=19% Similarity=0.348 Sum_probs=28.1
Q ss_pred EEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 179 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 179 vrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.+|+|+.-+++.+++. | ++.|.+||.+ .+|+.|+....++..+|.+
T Consensus 159 v~~v~g~~~~~~~l~~~-~--v~~v~ftGs~---~~g~~i~~~aa~~~~~~~l 205 (433)
T cd07134 159 VAVFEGDAEVAQALLEL-P--FDHIFFTGSP---AVGKIVMAAAAKHLASVTL 205 (433)
T ss_pred EEEEeCChhHHHHHHhC-C--CCEEEEECCh---HHHHHHHHHHHhcCCcEEE
Confidence 55666655444444442 2 6677777766 6777777665555555544
No 360
>PRK11259 solA N-methyltryptophan oxidase; Provisional
Probab=47.72 E-value=23 Score=33.98 Aligned_cols=31 Identities=19% Similarity=0.277 Sum_probs=27.0
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeechh
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATICKD 235 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~ 235 (376)
+|+..|+. =+|.++|..|.++|.+|+++.++
T Consensus 5 dv~IIGgG---i~G~s~A~~L~~~g~~V~lie~~ 35 (376)
T PRK11259 5 DVIVIGLG---SMGSAAGYYLARRGLRVLGLDRF 35 (376)
T ss_pred cEEEECCC---HHHHHHHHHHHHCCCeEEEEecc
Confidence 58899988 68999999999999999996543
No 361
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=47.70 E-value=38 Score=34.59 Aligned_cols=54 Identities=17% Similarity=0.187 Sum_probs=31.9
Q ss_pred cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
-| +=-+.+|.|+.-.+.-.|-+-| +.+-|++||.. .+|++|+....+++.+|.+
T Consensus 174 lP-~~vv~~v~g~~~~~~~~l~~~~-~i~~V~ftGs~---~~g~~v~~~aa~~~~~~~l 227 (457)
T cd07114 174 FP-PGVVNVVTGFGPETGEALVEHP-LVAKIAFTGGT---ETGRHIARAAAENLAPVTL 227 (457)
T ss_pred cC-CCcEEEEeCCCchHHHHHhcCC-CCCEEEEECCH---HHHHHHHHHHHhcCCeEEE
Confidence 35 5556777765433222232222 56677777766 6777777776666666655
No 362
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=47.66 E-value=41 Score=29.49 Aligned_cols=102 Identities=24% Similarity=0.246 Sum_probs=56.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee--chhHHHHHhhcCchhhccceeeecccccC--cce-EEEEcCCCCHH
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKLRIPVEAQHNLVLSTSYAAH--KTK-IWLVGDDLTGK 275 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~--s~~~~~~l~~~~p~~~~~~Lv~~t~y~a~--~~K-~WlVG~~l~~~ 275 (376)
++|=+.|-. .+|+++|..|-++|++|..+ +++..+.+..+- ..-..+..+. .+. +++.=..-+.-
T Consensus 2 ~~Ig~IGlG---~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g-------~~~~~s~~e~~~~~dvvi~~v~~~~~v 71 (163)
T PF03446_consen 2 MKIGFIGLG---NMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAG-------AEVADSPAEAAEQADVVILCVPDDDAV 71 (163)
T ss_dssp BEEEEE--S---HHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTT-------EEEESSHHHHHHHBSEEEE-SSSHHHH
T ss_pred CEEEEEchH---HHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhh-------hhhhhhhhhHhhcccceEeecccchhh
Confidence 467788886 89999999999999999994 445566665541 1111122221 333 34321111111
Q ss_pred H--------hhcCCCCceeeecccCCCcC-------cc-CCccccccCcccCC
Q 017172 276 E--------QARAPKGTIFIPYTQIPPRK-------LR-KDCFYHSTPAMIIP 312 (376)
Q Consensus 276 e--------Q~~Ap~Gt~FipfsqfPp~~-------~R-~DCtY~~tpAM~~P 312 (376)
+ -...++|+.|+-.+-..|.. ++ +.+.|..-|-+.-|
T Consensus 72 ~~v~~~~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vdapV~Gg~ 124 (163)
T PF03446_consen 72 EAVLFGENILAGLRPGKIIIDMSTISPETSRELAERLAAKGVRYVDAPVSGGP 124 (163)
T ss_dssp HHHHHCTTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEEEEEEEESHH
T ss_pred hhhhhhhHHhhccccceEEEecCCcchhhhhhhhhhhhhccceeeeeeeeccc
Confidence 1 12347999999999988861 22 67888887765433
No 363
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=47.56 E-value=21 Score=38.03 Aligned_cols=29 Identities=14% Similarity=0.147 Sum_probs=26.2
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
..|++||+++ -||++++.+|+++|++|..
T Consensus 381 mkiLVtGa~G--~iG~~l~~~L~~~g~~v~~ 409 (668)
T PLN02260 381 LKFLIYGRTG--WIGGLLGKLCEKQGIAYEY 409 (668)
T ss_pred ceEEEECCCc--hHHHHHHHHHHhCCCeEEe
Confidence 3699999998 9999999999999999943
No 364
>PRK09183 transposase/IS protein; Provisional
Probab=47.52 E-value=27 Score=33.43 Aligned_cols=41 Identities=27% Similarity=0.299 Sum_probs=31.0
Q ss_pred ceEEEeccCCchh--HHHHHHHHHhcCCcEEEeech-hHHHHHh
Q 017172 201 AHVLLRGTVTANK--VANAVASSLCQMGIKVATICK-DDYEKLK 241 (376)
Q Consensus 201 ~eVfL~G~~~~sK--v~~AiA~~LC~rgv~V~m~s~-~~~~~l~ 241 (376)
.-|+|.|.+|.-| ++.||+..+|++|.+|..++. +-...++
T Consensus 103 ~~v~l~Gp~GtGKThLa~al~~~a~~~G~~v~~~~~~~l~~~l~ 146 (259)
T PRK09183 103 ENIVLLGPSGVGKTHLAIALGYEAVRAGIKVRFTTAADLLLQLS 146 (259)
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHHcCCeEEEEeHHHHHHHHH
Confidence 4588888887667 999999999999999988553 3333443
No 365
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=47.40 E-value=32 Score=35.11 Aligned_cols=51 Identities=20% Similarity=0.266 Sum_probs=33.8
Q ss_pred cCCCccEEEEcCCcee-hhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLA-AAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLt-aAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
-| +=-+.+|.|..-. ....+.. .+-|++||.+ ++|+.|+.+..++.++|.+
T Consensus 173 lP-~gv~~~v~g~~~~~~~~l~~~----~~~V~fTGs~---~~g~~i~~~aa~~~~~~~l 224 (454)
T cd07101 173 LP-RDLWQVVTGPGSEVGGAIVDN----ADYVMFTGST---ATGRVVAERAGRRLIGCSL 224 (454)
T ss_pred cC-CCcEEEEeCCcHHHHHHHHhC----CCEEEEECCH---HHHHHHHHHHHhcCCcEEE
Confidence 36 4447788875433 2333332 3568999988 8999999887777777655
No 366
>PLN00093 geranylgeranyl diphosphate reductase; Provisional
Probab=47.29 E-value=27 Score=36.08 Aligned_cols=42 Identities=21% Similarity=0.222 Sum_probs=32.6
Q ss_pred hhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 190 AVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 190 AvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
+.+-.+.++-.-+|+..|+. =-|.+.|.+|.++|++|+++.+
T Consensus 29 ~~~~~~~~~~~~DViIVGaG---PAG~~aA~~LA~~G~~VlllEr 70 (450)
T PLN00093 29 AAASKKLSGRKLRVAVIGGG---PAGACAAETLAKGGIETFLIER 70 (450)
T ss_pred cCCCCCcCCCCCeEEEECCC---HHHHHHHHHHHhCCCcEEEEec
Confidence 33344445555599999998 6799999999999999999543
No 367
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=47.24 E-value=39 Score=31.36 Aligned_cols=42 Identities=26% Similarity=0.301 Sum_probs=32.8
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEe--echhHHHHHhh
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 242 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m--~s~~~~~~l~~ 242 (376)
+.+.|++.|+.+ =+|.+++..+..+|++|.+ .+.++.+.+++
T Consensus 146 ~~~~vlI~g~~g--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 189 (326)
T cd08289 146 EQGPVLVTGATG--GVGSLAVSILAKLGYEVVASTGKADAADYLKK 189 (326)
T ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH
Confidence 346899999975 5999999988999999987 35567776654
No 368
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=47.03 E-value=36 Score=35.07 Aligned_cols=54 Identities=19% Similarity=0.204 Sum_probs=35.7
Q ss_pred cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
.| .=-+.+|.|+.-.++-.|-+-| +.+-|++||.+ ++|+.|+....++..+|.+
T Consensus 189 lP-~gv~~~v~g~~~~~~~~l~~~~-~v~~V~fTGs~---~~g~~i~~~aa~~~~~~~l 242 (482)
T cd07119 189 LP-AGVVNLVTGSGATVGAELAESP-DVDLVSFTGGT---ATGRSIMRAAAGNVKKVAL 242 (482)
T ss_pred CC-cCcEEEEecCcHHHHHHHhcCC-CCCEEEEECcH---HHHHHHHHHHHhcCCcEEE
Confidence 46 4458888886542222222222 77888999988 8888888887766666655
No 369
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=47.00 E-value=1.3e+02 Score=26.62 Aligned_cols=39 Identities=23% Similarity=0.197 Sum_probs=29.8
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEee--chhHHHHHh
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLK 241 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~--s~~~~~~l~ 241 (376)
.+.|+++|+. + +|.+++..+...|.+|... +.++.+.++
T Consensus 135 ~~~vli~g~~--~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 175 (271)
T cd05188 135 GDTVLVLGAG--G-VGLLAAQLAKAAGARVIVTDRSDEKLELAK 175 (271)
T ss_pred CCEEEEECCC--H-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH
Confidence 3579999987 7 9999999888899998883 344555554
No 370
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=46.99 E-value=34 Score=34.78 Aligned_cols=30 Identities=7% Similarity=0.051 Sum_probs=16.5
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.+-|++||.. .+|+.|+....+.+.+|++
T Consensus 196 ~i~~V~ftGs~---~~g~~v~~~aa~~~~~~~l 225 (455)
T cd07093 196 DVDLISFTGET---ATGRTIMRAAAPNLKPVSL 225 (455)
T ss_pred CccEEEEECCH---HHHHHHHHHHhhcccceEe
Confidence 45555666655 5566665555555555444
No 371
>PLN00015 protochlorophyllide reductase
Probab=46.84 E-value=25 Score=33.48 Aligned_cols=28 Identities=25% Similarity=0.500 Sum_probs=24.2
Q ss_pred EEeccCCchhHHHHHHHHHhcCC-cEEEeec
Q 017172 204 LLRGTVTANKVANAVASSLCQMG-IKVATIC 233 (376)
Q Consensus 204 fL~G~~~~sKv~~AiA~~LC~rg-v~V~m~s 233 (376)
++||+++ =+|+++|..|+++| .+|++.+
T Consensus 1 lITGas~--GIG~aia~~l~~~G~~~V~~~~ 29 (308)
T PLN00015 1 IITGASS--GLGLATAKALAETGKWHVVMAC 29 (308)
T ss_pred CEeCCCC--hHHHHHHHHHHHCCCCEEEEEe
Confidence 4789984 79999999999999 9998843
No 372
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=46.67 E-value=33 Score=34.91 Aligned_cols=47 Identities=21% Similarity=0.359 Sum_probs=24.8
Q ss_pred EEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 179 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 179 vrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+-+|+|+.-+.+.++.. | .+-|.+||.+ .+|++|+....+++.++++
T Consensus 159 ~~vv~g~~~~~~~l~~~-~--v~~V~ftGs~---~~g~~i~~~a~~~~~~~~l 205 (426)
T cd07087 159 VAVVEGGVEVATALLAE-P--FDHIFFTGSP---AVGKIVMEAAAKHLTPVTL 205 (426)
T ss_pred EEEEeCCchHHHHHHhC-C--CCEEEEeCCh---HHHHHHHHHHHhhCCceEE
Confidence 34555543333333333 3 6666677666 6666666655555455443
No 373
>PRK07201 short chain dehydrogenase; Provisional
Probab=46.66 E-value=31 Score=36.08 Aligned_cols=30 Identities=13% Similarity=0.197 Sum_probs=26.6
Q ss_pred eEEEeccCCchhHHHHHHHHHh--cCCcEEEeec
Q 017172 202 HVLLRGTVTANKVANAVASSLC--QMGIKVATIC 233 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC--~rgv~V~m~s 233 (376)
.||+||+++ -||++++..|. ++|.+|..++
T Consensus 2 ~ILVTGatG--fIG~~lv~~Ll~~~~g~~V~~l~ 33 (657)
T PRK07201 2 RYFVTGGTG--FIGRRLVSRLLDRRREATVHVLV 33 (657)
T ss_pred eEEEeCCcc--HHHHHHHHHHHhcCCCCEEEEEE
Confidence 489999998 99999999999 6899998844
No 374
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=46.52 E-value=37 Score=32.39 Aligned_cols=37 Identities=22% Similarity=0.171 Sum_probs=30.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee--chhHHHHH
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKL 240 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~--s~~~~~~l 240 (376)
++|-+.|+. -+|.+||..|+++|.+|.++ +.+.-+++
T Consensus 5 ~kI~vIGaG---~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 43 (292)
T PRK07530 5 KKVGVIGAG---QMGNGIAHVCALAGYDVLLNDVSADRLEAG 43 (292)
T ss_pred CEEEEECCc---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence 578899998 79999999999999999993 44444443
No 375
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=46.45 E-value=27 Score=35.65 Aligned_cols=88 Identities=16% Similarity=0.172 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHhcCCeEEeecccccccccccccceeeeccCCCccEE----EEcC-Cceehhhh--hhcCCc-CCce
Q 017172 131 AINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIK----VVDG-SSLAAAVV--VNSLPK-TTAH 202 (376)
Q Consensus 131 ~IN~lIE~AIl~Ad~~GvKVlSLGlLNq~e~LN~~G~l~v~k~P~~Lrvr----VVdG-stLtaAvV--ln~IP~-~t~e 202 (376)
-|=.++.+|...|.+.|.- +..||. ||-+.---..||| |=.| -|++.|+| ...++. ..+.
T Consensus 109 QIlGQVK~Ay~~A~~~g~~---------g~~L~~---lf~~A~~~aKrVRteT~I~~~~vSv~s~av~~~~~~~~l~~k~ 176 (338)
T PRK00676 109 EIQGQVKRAYLKAARERKL---------PFALHF---LFQKALKEGKVFRSKGGAPYAEVTIESVVQQELRRRQKSKKAS 176 (338)
T ss_pred HHHHHHHHHHHHHHHcCCc---------hHHHHH---HHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHhCCccCCE
Confidence 3556788888888888864 445554 4432221022222 2222 23443322 233432 6689
Q ss_pred EEEeccCCchhHHHHHHHHHhcCCcE-EEeec
Q 017172 203 VLLRGTVTANKVANAVASSLCQMGIK-VATIC 233 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rgv~-V~m~s 233 (376)
|++.|+. ++|+.+|.+|.++|++ |.+.+
T Consensus 177 vLvIGaG---em~~l~a~~L~~~g~~~i~v~n 205 (338)
T PRK00676 177 LLFIGYS---EINRKVAYYLQRQGYSRITFCS 205 (338)
T ss_pred EEEEccc---HHHHHHHHHHHHcCCCEEEEEc
Confidence 9999997 9999999999999975 66633
No 376
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=46.29 E-value=13 Score=34.26 Aligned_cols=26 Identities=19% Similarity=0.290 Sum_probs=23.3
Q ss_pred EEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 204 LLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 204 fL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
|+||+++ =||+.++.+|+++|..|++
T Consensus 1 lItGa~G--fiG~~l~~~L~~~g~~v~~ 26 (306)
T PLN02725 1 FVAGHRG--LVGSAIVRKLEALGFTNLV 26 (306)
T ss_pred CcccCCC--cccHHHHHHHHhCCCcEEE
Confidence 5799997 8999999999999988765
No 377
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=46.28 E-value=34 Score=33.80 Aligned_cols=43 Identities=19% Similarity=0.305 Sum_probs=34.4
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEe--echhHHHHHhhcCc
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 245 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m--~s~~~~~~l~~~~p 245 (376)
.-|+.||.. |=+|+++|..+.+-|=+|++ =+.++.+..+.+.|
T Consensus 6 nTiLITGG~--sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p 50 (245)
T COG3967 6 NTILITGGA--SGIGLALAKRFLELGNTVIICGRNEERLAEAKAENP 50 (245)
T ss_pred cEEEEeCCc--chhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCc
Confidence 358999988 58999999999999999999 35556666666544
No 378
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=46.20 E-value=39 Score=37.01 Aligned_cols=51 Identities=20% Similarity=0.348 Sum_probs=37.3
Q ss_pred cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHH-h-cCCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSL-C-QMGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~L-C-~rgv~V~m 231 (376)
.| +=-+.+|+|+ .+.++..+| ..+-|.+||++ ++|+.|+... | +++.+|.+
T Consensus 200 lP-~gv~~~v~g~---~~~~~~~~~-~~~~V~FTGS~---~~G~~i~~~aaaa~~~~~~~l 252 (663)
T TIGR02278 200 LP-EGSLQLICGS---AGDLLDHLD-HRDVVAFTGSA---ATADRLRAHPNVLERGIRFNA 252 (663)
T ss_pred CC-CCcEEEEeCC---hHHHHhcCC-CCCEEEEECCH---HHHHHHHHhHhHHhcCceEEE
Confidence 47 6668899986 233555555 46789999999 9999999863 3 67777655
No 379
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=46.17 E-value=37 Score=35.08 Aligned_cols=53 Identities=17% Similarity=0.206 Sum_probs=33.0
Q ss_pred cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
-| .=-+.+|+|..-+.+.+. -.++.+-|++||.+ .+|+.|+.+..++..+|++
T Consensus 192 lP-~gvv~~v~g~~~~~~~L~--~~~~vd~v~fTGs~---~~g~~i~~~aa~~~~~~~l 244 (478)
T cd07086 192 LP-PGVVNLVTGGGDGGELLV--HDPRVPLVSFTGST---EVGRRVGETVARRFGRVLL 244 (478)
T ss_pred CC-ccceEEEecCchhHHHHh--cCCCCCEEEEECcH---HHHHHHHHHHhccCCcEEe
Confidence 35 444777777543222222 14567778888877 7788887777766666654
No 380
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=46.11 E-value=41 Score=34.73 Aligned_cols=54 Identities=24% Similarity=0.250 Sum_probs=38.0
Q ss_pred cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
-| .=-+.+|.|..-.++..|-+ .++++-|++||++ ++|+.|+.+..++.++|++
T Consensus 190 lP-~gvv~~v~g~~~~~~~~L~~-~~~v~~V~fTGS~---~~G~~i~~~aa~~~~p~~l 243 (479)
T cd07116 190 LP-PGVVNVVNGFGLEAGKPLAS-SKRIAKVAFTGET---TTGRLIMQYASENIIPVTL 243 (479)
T ss_pred CC-cCcEEEEecCchhHHHHHhc-CCCcCEEEEECCH---HHHHHHHHHHHcCCCeEEE
Confidence 47 55588898854322222222 2358999999999 8999999988887777764
No 381
>PRK08013 oxidoreductase; Provisional
Probab=45.81 E-value=26 Score=34.60 Aligned_cols=32 Identities=31% Similarity=0.380 Sum_probs=27.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeechh
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICKD 235 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~ 235 (376)
.+|+..|+. =+|-+.|.+|.++|++|+++.+.
T Consensus 4 ~dV~IvGaG---paGl~~A~~La~~G~~v~viE~~ 35 (400)
T PRK08013 4 VDVVIAGGG---MVGLAVACGLQGSGLRVAVLEQR 35 (400)
T ss_pred CCEEEECcC---HHHHHHHHHHhhCCCEEEEEeCC
Confidence 478999998 89999999999999999995443
No 382
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=45.77 E-value=23 Score=34.43 Aligned_cols=27 Identities=33% Similarity=0.460 Sum_probs=24.4
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
.||+.|.|+ -||.+|..|+++|++|+.
T Consensus 2 ~ILvlGGT~---egr~la~~L~~~g~~v~~ 28 (256)
T TIGR00715 2 TVLLMGGTV---DSRAIAKGLIAQGIEILV 28 (256)
T ss_pred eEEEEechH---HHHHHHHHHHhCCCeEEE
Confidence 589999994 399999999999999998
No 383
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=45.67 E-value=41 Score=33.77 Aligned_cols=29 Identities=17% Similarity=0.151 Sum_probs=14.4
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEE
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVA 230 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~ 230 (376)
+.+-|++||.+ ++|+.|+....++..+|.
T Consensus 178 ~i~~V~ftGs~---~~g~~v~~~aa~~~~~~~ 206 (431)
T cd07104 178 RVRMISFTGST---AVGRHIGELAGRHLKKVA 206 (431)
T ss_pred CCCEEEEECCH---HHHHHHHHHHhhcCCcEE
Confidence 44555555555 455555554444444433
No 384
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=45.49 E-value=41 Score=31.50 Aligned_cols=39 Identities=15% Similarity=0.288 Sum_probs=31.8
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeec--hhHHHHHhhc
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKLR 243 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s--~~~~~~l~~~ 243 (376)
.|.+.|+. -+|.++|..|.+.|.+|.++. .+.++.++++
T Consensus 2 ~I~IiG~G---~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~ 42 (304)
T PRK06522 2 KIAILGAG---AIGGLFGAALAQAGHDVTLVARRGAHLDALNEN 42 (304)
T ss_pred EEEEECCC---HHHHHHHHHHHhCCCeEEEEECChHHHHHHHHc
Confidence 47788987 799999999999999998854 4667777764
No 385
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=45.29 E-value=39 Score=34.69 Aligned_cols=54 Identities=19% Similarity=0.162 Sum_probs=35.3
Q ss_pred cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
.| .=-+.+|.|..-.++..|-.- ++.+-|++||++ ++|+.|+....++..++.+
T Consensus 188 lP-~gv~~~v~g~~~~~~~~L~~~-~~v~~V~fTGs~---~~g~~v~~~a~~~l~~~~l 241 (467)
T TIGR01804 188 LP-DGVFNVVLGKGAEVGEPLVNH-KDVAKVSFTGGV---PTGKKIMAAAADHLKHVTM 241 (467)
T ss_pred cC-cCcEEEEeCCcHHHHHHHhcC-CCCCEEEEECcH---HHHHHHHHHHHhcCCcEEE
Confidence 46 445788887633222223222 377889999988 8899998887766556554
No 386
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=45.09 E-value=41 Score=34.52 Aligned_cols=54 Identities=17% Similarity=0.215 Sum_probs=35.5
Q ss_pred cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
-| .=-+.+|+|..-.++-.|-+ .++.+-|++||.+ ++|++|+.+..+.+.+|++
T Consensus 190 lP-~gvv~~v~g~~~~~~~~L~~-~~~vd~V~ftGs~---~~g~~i~~~aa~~~~~~~l 243 (478)
T cd07131 190 LP-PGVVNVVHGRGEEVGEALVE-HPDVDVVSFTGST---EVGERIGETCARPNKRVAL 243 (478)
T ss_pred cC-CCcEEEEecCchHHHHHHhc-CCCCCEEEEECcH---HHHHHHHHHHhhcCCcEEE
Confidence 46 55578888865422222222 3368888999988 8888888877777666654
No 387
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=44.99 E-value=40 Score=34.20 Aligned_cols=31 Identities=16% Similarity=0.184 Sum_probs=16.7
Q ss_pred cCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 198 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 198 ~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
++.+-|++||++ .+|++|+....+++.+|.+
T Consensus 179 ~~v~~v~ftGs~---~~g~~i~~~aa~~~~~~~l 209 (432)
T cd07105 179 PAVRKVNFTGST---RVGRIIAETAAKHLKPVLL 209 (432)
T ss_pred CCCCEEEEECCH---HHHHHHHHHHHhcCCeEEE
Confidence 345555666655 5556555555555555443
No 388
>cd03522 MoeA_like MoeA_like. This domain is similar to a domain found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. There this domain is presumed to bind molybdopterin. The exact function of this subgroup is unknown.
Probab=44.86 E-value=31 Score=34.62 Aligned_cols=113 Identities=17% Similarity=0.262 Sum_probs=71.9
Q ss_pred eEEEeecccCceec-eeEEeec-cCceeccchhhhHHHHHHHHHHHHHHhcCCeEEeecc----ccccccc-ccccceee
Q 017172 98 TFVSESNTLDKLKL-QTWVVPR-YIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGL----LNQGEEL-NRNGEIYL 170 (376)
Q Consensus 98 ~Fv~e~~~l~kl~~-qtWviPR-y~fqY~l~~~~~~IN~lIE~AIl~Ad~~GvKVlSLGl----LNq~e~L-N~~G~l~v 170 (376)
-|.++.-+|+.+|. ..+.+.- .+++..-+-+. | -|+|+|+|.. +.+.+++ .+.|-.-|
T Consensus 90 ll~vd~~~l~~~N~~~~i~~at~~~~~~v~~g~~--v-------------A~~riiPl~v~~~~~~~a~~~~~~~gi~~V 154 (312)
T cd03522 90 LLKVDVEALDALNAIDAITLATLHNNTPVEAGQM--V-------------ATVKIIPLAVPEALVERAEALARDGPLLRV 154 (312)
T ss_pred eEEEcHHHHHhhhCCCCEEEEEcCCCeEeCCCCE--E-------------EEEEEeeeecCHHHHHHHHHHHHhCCCcEE
Confidence 56777777766666 3333332 12222222221 1 3688888875 5555554 44678888
Q ss_pred eccCCCccEEEEc-CCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe--echhHHHHHhhcC
Q 017172 171 ERQPNKLKIKVVD-GSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 244 (376)
Q Consensus 171 ~k~P~~LrvrVVd-GstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m--~s~~~~~~l~~~~ 244 (376)
+-+. .+||.|+. |+-+. .|..- +|-+.+|+..|-+.|++|.- .-.|+.+.|+..+
T Consensus 155 ~v~r-~~rv~II~TG~Ev~-----------------~G~i~-D~~~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~ai 212 (312)
T cd03522 155 APFR-PLRVGLIVTGSEVY-----------------GGRIE-DKFGPVLRARLAALGVELVEQVIVPHDEAAIAAAI 212 (312)
T ss_pred EecC-CCEEEEEEcCCcCC-----------------CCcEE-EhHHHHHHHHHHHCCCEEEEEEEcCCCHHHHHHHH
Confidence 8887 88999885 66542 23322 46789999999999999876 4577777777663
No 389
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=44.83 E-value=41 Score=33.16 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=30.2
Q ss_pred CCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 196 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 196 IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
|+-.-+.|.+.|+.+ =+|++||..|.++|..|.+.+
T Consensus 155 i~l~Gk~vvViG~gg--~vGkpia~~L~~~gatVtv~~ 190 (283)
T PRK14192 155 IELAGKHAVVVGRSA--ILGKPMAMMLLNANATVTICH 190 (283)
T ss_pred CCCCCCEEEEECCcH--HHHHHHHHHHHhCCCEEEEEe
Confidence 455567899999993 599999999999999999843
No 390
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=44.71 E-value=41 Score=34.92 Aligned_cols=53 Identities=19% Similarity=0.260 Sum_probs=35.3
Q ss_pred cCCCccEEEEcCCce-ehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 173 QPNKLKIKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstL-taAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
-| +=-+.+|+|..- +.+.++. .++.+-|++||++ .+|+.|+.+..++..++++
T Consensus 190 lP-~g~~~~v~g~~~~~~~~l~~--~~~v~~v~fTGs~---~~g~~i~~~aa~~~~~~~l 243 (475)
T cd07117 190 LP-KGVVNIVTGKGSKSGEYLLN--HPGLDKLAFTGST---EVGRDVAIAAAKKLIPATL 243 (475)
T ss_pred CC-cCcEEEEecCcHHHHHHHhc--CCCCCEEEEECcH---HHHHHHHHHHhccCCcEEE
Confidence 46 334788887532 2222332 3477888889888 7888888887777777665
No 391
>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function. One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].
Probab=44.65 E-value=32 Score=34.64 Aligned_cols=42 Identities=17% Similarity=0.209 Sum_probs=35.2
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEe--echhHHHHHhhcC
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 244 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m--~s~~~~~~l~~~~ 244 (376)
=|++.|..+ +=++|.+|+=|=|||.=|.+ .+.|+++.++.+-
T Consensus 5 vVvI~Gs~~-~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~ 48 (299)
T PF08643_consen 5 VVVIAGSPH-DPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED 48 (299)
T ss_pred EEEEECCCC-CccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc
Confidence 356668765 68999999999999999988 6778899888885
No 392
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=44.44 E-value=22 Score=33.57 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=31.8
Q ss_pred ehhhhhhcC-----CcCCceEEEeccCCchhHHHHHHHHHhcCCcE---EEeech
Q 017172 188 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIK---VATICK 234 (376)
Q Consensus 188 taAvVln~I-----P~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~---V~m~s~ 234 (376)
+.|.+++.+ +-.-+.|++.|+. -.|++||..|.+.|++ |.++++
T Consensus 8 ~lAG~~~al~~~g~~l~~~rvlvlGAG---gAg~aiA~~L~~~G~~~~~i~ivdr 59 (226)
T cd05311 8 TLAGLLNALKLVGKKIEEVKIVINGAG---AAGIAIARLLLAAGAKPENIVVVDS 59 (226)
T ss_pred HHHHHHHHHHHhCCCccCCEEEEECch---HHHHHHHHHHHHcCcCcceEEEEeC
Confidence 444555554 2234589999998 6899999999999995 777443
No 393
>PRK09004 FMN-binding protein MioC; Provisional
Probab=44.30 E-value=24 Score=31.01 Aligned_cols=48 Identities=21% Similarity=0.219 Sum_probs=31.9
Q ss_pred eccCCchhHHHHHHHHHhcCCcEEEeechhHHHHHhhcCchhhccceeeec-ccccC
Q 017172 206 RGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLST-SYAAH 261 (376)
Q Consensus 206 ~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~~~~l~~~~p~~~~~~Lv~~t-~y~a~ 261 (376)
||++ -.+|..|+..|.++|++|.+.+..+.+.+. . ...++..+ +|-.|
T Consensus 12 tGna--e~~A~~l~~~~~~~g~~~~~~~~~~~~~l~----~--~~~li~~~sT~G~G 60 (146)
T PRK09004 12 LGGA--EYVADHLAEKLEEAGFSTETLHGPLLDDLS----A--SGLWLIVTSTHGAG 60 (146)
T ss_pred chHH--HHHHHHHHHHHHHcCCceEEeccCCHHHhc----c--CCeEEEEECCCCCC
Confidence 4666 489999999999999999885544333332 2 24566555 67554
No 394
>TIGR01377 soxA_mon sarcosine oxidase, monomeric form. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms
Probab=44.27 E-value=26 Score=33.65 Aligned_cols=31 Identities=19% Similarity=0.145 Sum_probs=26.1
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeechh
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATICKD 235 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~ 235 (376)
+|...|+. =+|.++|..|.++|.+|+++.++
T Consensus 2 dvvIIGaG---i~G~s~A~~La~~g~~V~l~e~~ 32 (380)
T TIGR01377 2 DVIVVGAG---IMGCFAAYHLAKHGKKTLLLEQF 32 (380)
T ss_pred cEEEECCC---HHHHHHHHHHHHCCCeEEEEecc
Confidence 57888887 58999999999999999996543
No 395
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=44.16 E-value=39 Score=32.69 Aligned_cols=37 Identities=16% Similarity=0.078 Sum_probs=29.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee--chhHHHHH
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKL 240 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~--s~~~~~~l 240 (376)
+.|.+.|.. -+|.++|..|+++|.+|.++ +++..+..
T Consensus 3 ~~V~VIG~G---~mG~~iA~~la~~G~~V~v~d~~~~~~~~~ 41 (308)
T PRK06129 3 GSVAIIGAG---LIGRAWAIVFARAGHEVRLWDADPAAAAAA 41 (308)
T ss_pred cEEEEECcc---HHHHHHHHHHHHCCCeeEEEeCCHHHHHHH
Confidence 358899966 79999999999999999994 33344443
No 396
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=44.03 E-value=22 Score=31.99 Aligned_cols=64 Identities=20% Similarity=0.318 Sum_probs=47.3
Q ss_pred EEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcC--CcEEEe-----echhHHHHHhhcCch
Q 017172 180 KVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQM--GIKVAT-----ICKDDYEKLKLRIPV 246 (376)
Q Consensus 180 rVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~r--gv~V~m-----~s~~~~~~l~~~~p~ 246 (376)
.-|+|+.|+-++.= ...+.-..|||.|.+ ..++..++..|.++ |++|+- +++++.+.+..++..
T Consensus 29 ~rv~g~dl~~~l~~-~~~~~~~~ifllG~~--~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~~~~~~i~~~I~~ 99 (172)
T PF03808_consen 29 ERVTGSDLFPDLLR-RAEQRGKRIFLLGGS--EEVLEKAAANLRRRYPGLRIVGYHHGYFDEEEEEAIINRINA 99 (172)
T ss_pred cccCHHHHHHHHHH-HHHHcCCeEEEEeCC--HHHHHHHHHHHHHHCCCeEEEEecCCCCChhhHHHHHHHHHH
Confidence 66889998877654 455555699999999 49999999999988 999986 344566666655433
No 397
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=43.97 E-value=43 Score=34.45 Aligned_cols=53 Identities=21% Similarity=0.286 Sum_probs=36.4
Q ss_pred cCCCccEEEEcCCce-ehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 173 QPNKLKIKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstL-taAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
-| .=-+.+|.|+.- +...++.. ++.+-|.+||++ .+|++|+.+..++..+|.+
T Consensus 190 lP-~gvv~vv~g~~~~~~~~l~~~--~~v~~v~fTGs~---~~g~~i~~~aa~~~~~~~l 243 (473)
T cd07097 190 LP-AGVFNLVMGSGSEVGQALVEH--PDVDAVSFTGST---AVGRRIAAAAAARGARVQL 243 (473)
T ss_pred CC-CcceEEeccCchHHHHHHhcC--CCCCEEEEECcH---HHHHHHHHHHhccCCcEEE
Confidence 46 445888888632 22222221 478889999988 8899999888777777765
No 398
>PLN02467 betaine aldehyde dehydrogenase
Probab=43.95 E-value=43 Score=35.19 Aligned_cols=54 Identities=17% Similarity=0.198 Sum_probs=39.3
Q ss_pred cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
-| .=-+.+|.|+.-.+...|- -.++.+-|++||.+ .+|++|+.+..++..+|++
T Consensus 206 ~P-~gvv~~v~g~~~~~~~~L~-~~~~v~~v~fTGs~---~~g~~v~~~aa~~~~~~~l 259 (503)
T PLN02467 206 LP-PGVLNVVTGLGTEAGAPLA-SHPGVDKIAFTGST---ATGRKIMTAAAQMVKPVSL 259 (503)
T ss_pred cC-cCeEEEEeCCchhHHHHHh-cCCCCCEEEEECCH---HHHHHHHHHHhccCCcEEE
Confidence 47 4458999986543333331 23478899999998 8999999988888788766
No 399
>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=43.85 E-value=30 Score=34.01 Aligned_cols=31 Identities=29% Similarity=0.340 Sum_probs=27.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
.+|...|+. =+|-+.|.+|.++|++|+++.+
T Consensus 3 ~dV~IVGaG---~aGl~~A~~L~~~G~~v~viE~ 33 (405)
T PRK05714 3 ADLLIVGAG---MVGSALALALQGSGLEVLLLDG 33 (405)
T ss_pred ccEEEECcc---HHHHHHHHHHhcCCCEEEEEcC
Confidence 468999998 6899999999999999999644
No 400
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=43.48 E-value=50 Score=34.53 Aligned_cols=60 Identities=18% Similarity=0.185 Sum_probs=40.9
Q ss_pred ceeeec-cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 167 EIYLER-QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 167 ~l~v~k-~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+++.+. .| +=-+.+|+|+.-.++..|=+ .++.+-|++||++ ++|+.|+....++..+|.+
T Consensus 194 ~~~~~aglP-~gvv~vv~g~~~~~~~~l~~-~~~v~~v~FTGS~---~~G~~i~~~aa~~l~~~~l 254 (482)
T PRK11241 194 ELAIRAGIP-AGVFNVVTGSAGAVGGELTS-NPLVRKLSFTGST---EIGRQLMEQCAKDIKKVSL 254 (482)
T ss_pred HHHHHcCCC-cccEEEEecCCchhHHHHhc-CCCCCEEEEECcH---HHHHHHHHHHHhcCCcEEE
Confidence 333343 57 55689999865433222222 3478899999998 8999999987777777655
No 401
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=43.33 E-value=44 Score=34.99 Aligned_cols=54 Identities=11% Similarity=0.137 Sum_probs=38.5
Q ss_pred cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhc------CCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQ------MGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~------rgv~V~m 231 (376)
-| +=-+.+|.|..-.+.-.|-+-| +++-|++||.+ ++|++|+....+ +..+|++
T Consensus 221 lP-~gvv~vv~g~~~~~~~~L~~~~-~v~~V~fTGs~---~~g~~i~~~aa~~~~~~~~l~~~~l 280 (512)
T cd07124 221 LP-PGVVNFLPGPGEEVGDYLVEHP-DVRFIAFTGSR---EVGLRIYERAAKVQPGQKWLKRVIA 280 (512)
T ss_pred cC-CCceEEeccCchHHHHHHhcCC-CCCEEEEeCch---HHHHHHHHHHhcccccccCCCcEEE
Confidence 47 5558999986433333333333 78899999999 899999998876 4666665
No 402
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=43.00 E-value=47 Score=34.94 Aligned_cols=88 Identities=23% Similarity=0.226 Sum_probs=50.1
Q ss_pred HHHHHHhcCCeEEeecccccccccccccceeeec-cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHH
Q 017172 139 AILEADAKGVKVISLGLLNQGEELNRNGEIYLER-QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANA 217 (376)
Q Consensus 139 AIl~Ad~~GvKVlSLGlLNq~e~LN~~G~l~v~k-~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~A 217 (376)
-|.-|=+.|-.||=----.-......=.+++.+. -| .=-+.+|.|..-.+.-.|-+ .++.+-|++||.+ ++|+.
T Consensus 180 ~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP-~gvv~~v~g~~~~~~~~l~~-~~~v~~V~ftGs~---~~g~~ 254 (500)
T TIGR01238 180 QISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFP-AGTIQLLPGRGADVGAALTS-DPRIAGVAFTGST---EVAQL 254 (500)
T ss_pred HHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCC-CCceEEEecCcchHHHHHhc-CCCcCeEEEECCH---HHHHH
Confidence 3445667777766321111111111112233333 47 55588998865333333322 2468899999998 89999
Q ss_pred HHHHHhcCC---cEEEe
Q 017172 218 VASSLCQMG---IKVAT 231 (376)
Q Consensus 218 iA~~LC~rg---v~V~m 231 (376)
|+..+.++. .+|++
T Consensus 255 v~~~aa~~~~~~~~v~l 271 (500)
T TIGR01238 255 INQTLAQREDAPVPLIA 271 (500)
T ss_pred HHHHHhhcccCCceEEE
Confidence 999888775 56654
No 403
>PRK13508 tagatose-6-phosphate kinase; Provisional
Probab=42.82 E-value=35 Score=32.35 Aligned_cols=95 Identities=23% Similarity=0.273 Sum_probs=56.3
Q ss_pred HHHHHHHHhcCCe--EEeeccccccc-ccccccceeeeccCCCccEEEEc----CCceehhhhhhcCCcCCceEEEeccC
Q 017172 137 EEAILEADAKGVK--VISLGLLNQGE-ELNRNGEIYLERQPNKLKIKVVD----GSSLAAAVVVNSLPKTTAHVLLRGTV 209 (376)
Q Consensus 137 E~AIl~Ad~~GvK--VlSLGlLNq~e-~LN~~G~l~v~k~P~~LrvrVVd----GstLtaAvVln~IP~~t~eVfL~G~~ 209 (376)
++++.+.-+.|++ |+++|. ++- -.+++ +.+. .| -.++.+|| |++.+|+.+.--+ +|-. +.-+
T Consensus 204 ~~~~~~~~~~g~~~vvvT~G~--~G~~~~~~~-~~~~--~~-~~~v~vvDttGAGDaF~Agfi~~l~-~g~~---~~~a- 272 (309)
T PRK13508 204 KEVLQQPLFEGIEWIIVSLGA--DGAFAKHND-TFYK--VD-IPKIEVVNPVGSGDSTVAGIASGLL-HQED---DADL- 272 (309)
T ss_pred HHHHHHHHHcCCCEEEEecCC--CceEEEeCC-ceEE--Ee-CCCccccCCcChhHHHHHHHHHHHH-cCCC---HHHH-
Confidence 3443333345765 467775 221 12222 2222 24 45688999 9999888776433 1111 1112
Q ss_pred CchhHHHHHHHHHhcCCcEEEeechhHHHHHhhcCc
Q 017172 210 TANKVANAVASSLCQMGIKVATICKDDYEKLKLRIP 245 (376)
Q Consensus 210 ~~sKv~~AiA~~LC~rgv~V~m~s~~~~~~l~~~~p 245 (376)
-|.|.|.|..-|++-..+.. ++.+++.+.+++.
T Consensus 273 --l~~a~a~aa~~~~~~~~~~~-~~~~~~~~~~~i~ 305 (309)
T PRK13508 273 --LKKANVLGMLNAQEKQTGHV-NMANYDELYNQIE 305 (309)
T ss_pred --HHHHHHHHHHHhcCcCcCCC-CHHHHHHHHhceE
Confidence 38999999998977666666 8888888877643
No 404
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=42.80 E-value=42 Score=31.99 Aligned_cols=37 Identities=14% Similarity=0.205 Sum_probs=28.0
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeec--hhHHHHHh
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLK 241 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s--~~~~~~l~ 241 (376)
.|-+.|.. .+|.++|.+|.++|.+|..++ ++..+.++
T Consensus 2 ~I~IIG~G---~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~ 40 (279)
T PRK07417 2 KIGIVGLG---LIGGSLGLDLRSLGHTVYGVSRRESTCERAI 40 (279)
T ss_pred eEEEEeec---HHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 46777866 899999999999999999843 33444443
No 405
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=42.79 E-value=33 Score=34.98 Aligned_cols=31 Identities=19% Similarity=0.220 Sum_probs=26.8
Q ss_pred ceEEEeccCCchhHHHH-HHHHHhcCCcEEEeech
Q 017172 201 AHVLLRGTVTANKVANA-VASSLCQMGIKVATICK 234 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~A-iA~~LC~rgv~V~m~s~ 234 (376)
+.|++.|.. +-|.+ +|.+|.++|.+|...+.
T Consensus 8 ~~v~viG~G---~sG~s~~a~~L~~~G~~V~~~D~ 39 (461)
T PRK00421 8 KRIHFVGIG---GIGMSGLAEVLLNLGYKVSGSDL 39 (461)
T ss_pred CEEEEEEEc---hhhHHHHHHHHHhCCCeEEEECC
Confidence 378999988 78999 79999999999999543
No 406
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=42.77 E-value=29 Score=36.51 Aligned_cols=52 Identities=27% Similarity=0.333 Sum_probs=41.4
Q ss_pred cEEEEcCCceehhhhhhcC-CcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 178 KIKVVDGSSLAAAVVVNSL-PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 178 rvrVVdGstLtaAvVln~I-P~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
.++.++|.+-.++|=.-.- +...+-||.+|+++ |+|+-|..-|-+||..|..
T Consensus 56 ~~~~~~~~~~e~~v~~~~~~~~~~~~VlVvGatG--~vG~~iv~~llkrgf~vra 108 (411)
T KOG1203|consen 56 PISPVTGTTSEAEVSPPNNNSKKPTTVLVVGATG--KVGRRIVKILLKRGFSVRA 108 (411)
T ss_pred CCCccccccceeeeccCCCCCCCCCeEEEecCCC--chhHHHHHHHHHCCCeeee
Confidence 4667778777776543333 34667899999998 9999999999999999888
No 407
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=42.74 E-value=71 Score=28.85 Aligned_cols=44 Identities=18% Similarity=0.199 Sum_probs=32.4
Q ss_pred cCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEee--chhHHHHHh
Q 017172 195 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLK 241 (376)
Q Consensus 195 ~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~--s~~~~~~l~ 241 (376)
.+++| +.|+++|+.+ =+|.+++..+..+|++|.+. ++++-+.++
T Consensus 141 ~~~~g-~~vlI~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 186 (325)
T cd08253 141 GAKAG-ETVLVHGGSG--AVGHAAVQLARWAGARVIATASSAEGAELVR 186 (325)
T ss_pred CCCCC-CEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 34544 6889999864 69999999999999999883 344455543
No 408
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=42.70 E-value=48 Score=34.36 Aligned_cols=53 Identities=19% Similarity=0.187 Sum_probs=35.0
Q ss_pred cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
.| .=-+.+|+|+.-+ +-.|-+ -++++-|++||++ ++|+.|+.....+..+|.+
T Consensus 197 lP-~g~v~~v~g~~~~-~~~L~~-~~~vd~V~fTGS~---~~g~~i~~~aa~~l~~~~l 249 (488)
T PRK13252 197 LP-DGVFNVVQGDGRV-GAWLTE-HPDIAKVSFTGGV---PTGKKVMAAAAASLKEVTM 249 (488)
T ss_pred cC-cccEEEEecCcHH-HHHHhc-CCCCCEEEEECcH---HHHHHHHHHHhhcCCcEEE
Confidence 46 4447888876542 222322 3478888999988 8888888877766666654
No 409
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=42.53 E-value=48 Score=33.57 Aligned_cols=53 Identities=15% Similarity=0.219 Sum_probs=35.3
Q ss_pred CCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 174 PNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 174 P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
| .=-+.+|+|..-..+-.|-+ .++++-|++||.+ ++|+.|+....+++.++++
T Consensus 173 P-~g~v~~v~~~~~~~~~~l~~-~~~vd~V~ftGs~---~~g~~v~~~aa~~~~~~~l 225 (451)
T cd07103 173 P-AGVLNVVTGSPAEIGEALCA-SPRVRKISFTGST---AVGKLLMAQAADTVKRVSL 225 (451)
T ss_pred C-cccEEEEecCchhHHHHHhc-CCCCCEEEEECCH---HHHHHHHHHHHhcCCcEEE
Confidence 6 44478888865332222211 2377889999987 8899998887777777655
No 410
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=42.52 E-value=50 Score=33.71 Aligned_cols=30 Identities=10% Similarity=0.156 Sum_probs=16.0
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.+-|++||.+ .+|+.|+....++..+|.+
T Consensus 196 ~id~v~fTGs~---~~g~~v~~~aa~~~~~~~l 225 (453)
T cd07115 196 DVDKITFTGST---AVGRKIMQGAAGNLKRVSL 225 (453)
T ss_pred CCCEEEEECcH---HHHHHHHHHHhhcCCeEEE
Confidence 45555666655 5566665554444444443
No 411
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=42.49 E-value=1.4e+02 Score=29.57 Aligned_cols=97 Identities=21% Similarity=0.222 Sum_probs=62.5
Q ss_pred HhcCCeEEeecccccccccccccceeeeccC-CCccEEEEcCCceeh-------hhhhhcC-CcCCceEEEeccCCchhH
Q 017172 144 DAKGVKVISLGLLNQGEELNRNGEIYLERQP-NKLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKV 214 (376)
Q Consensus 144 d~~GvKVlSLGlLNq~e~LN~~G~l~v~k~P-~~LrvrVVdGstLta-------AvVln~I-P~~t~eVfL~G~~~~sKv 214 (376)
+..|+|+++.--=|...-|..-.-+++--.| ...-+=++||+.||+ |+-..-+ +++.+.|-+.|.. ..
T Consensus 63 ~~~g~K~v~~~p~N~~~glp~~~g~i~L~d~~tG~p~ai~d~~~lT~~RTaA~salaa~~La~~~~~~lgiiG~G---~q 139 (325)
T TIGR02371 63 EMAGVKCVNVHPGNPDRHLPTVMALIILVSPETGFPIALMDGTYITDMRTGAAGGVAAKYLARKDSSVLGIIGAG---RQ 139 (325)
T ss_pred CeEEEEEEeecCCchhcCCCcceEEEEEeeCCCCCeEEEEeCcchhhHHHHHHHHHHHHHhCCCCCCEEEEECCC---HH
Confidence 4579999987555554444333334443444 355577899999974 2333445 7899999999998 79
Q ss_pred HHHHHHHHh--cCCcEEEe--echhHHHHHhhc
Q 017172 215 ANAVASSLC--QMGIKVAT--ICKDDYEKLKLR 243 (376)
Q Consensus 215 ~~AiA~~LC--~rgv~V~m--~s~~~~~~l~~~ 243 (376)
|++-+.+|+ ++.-+|.+ .++++-+.+.++
T Consensus 140 A~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~ 172 (325)
T TIGR02371 140 AWTQLEALSRVFDLEEVSVYCRTPSTREKFALR 172 (325)
T ss_pred HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHH
Confidence 999777776 44556666 344555555444
No 412
>PRK12266 glpD glycerol-3-phosphate dehydrogenase; Reviewed
Probab=42.46 E-value=29 Score=36.21 Aligned_cols=36 Identities=22% Similarity=0.224 Sum_probs=30.1
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeechhHH
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY 237 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~~ 237 (376)
..-+|+..|.. =+|-++|..|++||.+|+++.+++|
T Consensus 5 ~~~DVvIIGGG---i~G~~~A~~la~rGl~V~LvEk~d~ 40 (508)
T PRK12266 5 ETYDLLVIGGG---INGAGIARDAAGRGLSVLLCEQDDL 40 (508)
T ss_pred CcCCEEEECcC---HHHHHHHHHHHHCCCeEEEEecCCC
Confidence 34579999988 5799999999999999999766544
No 413
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=42.46 E-value=75 Score=31.51 Aligned_cols=94 Identities=23% Similarity=0.350 Sum_probs=66.3
Q ss_pred HHhcCCeEEeec----cccccccc-------ccccceeeeccCC---------CccEEEEcCCc--------ee-hhhhh
Q 017172 143 ADAKGVKVISLG----LLNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS--------LA-AAVVV 193 (376)
Q Consensus 143 Ad~~GvKVlSLG----lLNq~e~L-------N~~G~l~v~k~P~---------~LrvrVVdGst--------Lt-aAvVl 193 (376)
|.+.|.+|+.|. -++|+|.| ++++-++|-|||. ..+|=|+++-+ |+ ...+.
T Consensus 61 ~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL~Dl~Ti~ 140 (304)
T TIGR00658 61 AYQLGGHPLYLNPNDLQLGRGESIKDTARVLSRYVDGIMARVYKHEDVEELAKYASVPVINGLTDLFHPCQALADLLTII 140 (304)
T ss_pred HHHcCCCEEEeCCccccCCCCCCHHHHHHHHHHhCCEEEEECCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 456999999985 35677764 6778889999983 35666787643 11 12333
Q ss_pred hcCCc-CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeechhHHH
Q 017172 194 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE 238 (376)
Q Consensus 194 n~IP~-~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~~~ 238 (376)
...+. .-..|-+.|.. +.+++..+..|.+-|++|.+.+.+.|+
T Consensus 141 e~~g~l~g~~v~~vGd~--~~v~~Sl~~~l~~~g~~v~~~~P~~~~ 184 (304)
T TIGR00658 141 EHFGKLKGVKVVYVGDG--NNVCNSLMLAGAKLGMDVVVATPEGYE 184 (304)
T ss_pred HHhCCCCCcEEEEEeCC--CchHHHHHHHHHHcCCEEEEECCchhc
Confidence 34332 12367788998 489999999999999999997777664
No 414
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible oxidation of CO to CO2. CODH contains a nickel-iron-sulfur cluster (C-center) and an iron-sulfur cluster (B-center). CO oxidation occurs at the C-center. Three accessory proteins encoded by cooCTJ genes are involved in nickel incorporation into a nickel site. CooC functions as a nickel insertase that mobilizes nickel to apoCODH using energy released from ATP hydrolysis. CooC is a homodimer and has NTPase activities. Mutation at the P-loop abolishs its function.
Probab=42.35 E-value=36 Score=28.93 Aligned_cols=34 Identities=26% Similarity=0.320 Sum_probs=26.8
Q ss_pred EEEeccCCchh--HHHHHHHHHhcCCcEEEeechhH
Q 017172 203 VLLRGTVTANK--VANAVASSLCQMGIKVATICKDD 236 (376)
Q Consensus 203 VfL~G~~~~sK--v~~AiA~~LC~rgv~V~m~s~~~ 236 (376)
+.++|+.+.-| ++..+|.+|.++|.+|++++.|.
T Consensus 2 i~~~GkgG~GKTt~a~~la~~l~~~g~~V~~id~D~ 37 (116)
T cd02034 2 IAITGKGGVGKTTIAALLARYLAEKGKPVLAIDADP 37 (116)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEECCc
Confidence 56776665445 88899999999999999877665
No 415
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=42.31 E-value=31 Score=33.96 Aligned_cols=33 Identities=21% Similarity=0.286 Sum_probs=28.4
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeechhH
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD 236 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~ 236 (376)
.+|...|+. =+|.++|.+|.++|.+|+++.++.
T Consensus 2 ~~vvIIGaG---~~G~~~A~~La~~g~~V~vle~~~ 34 (410)
T PRK12409 2 SHIAVIGAG---ITGVTTAYALAQRGYQVTVFDRHR 34 (410)
T ss_pred CEEEEECCC---HHHHHHHHHHHHCCCeEEEEeCCC
Confidence 478889988 689999999999999999976554
No 416
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=42.25 E-value=24 Score=37.52 Aligned_cols=22 Identities=27% Similarity=0.332 Sum_probs=20.0
Q ss_pred hhHHHHHHHHHhcCCcEEEeec
Q 017172 212 NKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 212 sKv~~AiA~~LC~rgv~V~m~s 233 (376)
-|.|+|||.++.+||-+|.+++
T Consensus 282 GkmG~alA~aa~~~GA~VtlI~ 303 (475)
T PRK13982 282 GKQGFAIAAAAAAAGAEVTLIS 303 (475)
T ss_pred hHHHHHHHHHHHHCCCcEEEEe
Confidence 3999999999999999999854
No 417
>PRK05865 hypothetical protein; Provisional
Probab=42.14 E-value=31 Score=39.21 Aligned_cols=30 Identities=17% Similarity=0.314 Sum_probs=27.2
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
.|++||+++ -+|++++.+|.++|.+|..++
T Consensus 2 kILVTGATG--fIGs~La~~Ll~~G~~Vv~l~ 31 (854)
T PRK05865 2 RIAVTGASG--VLGRGLTARLLSQGHEVVGIA 31 (854)
T ss_pred EEEEECCCC--HHHHHHHHHHHHCcCEEEEEE
Confidence 589999996 999999999999999998744
No 418
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=42.08 E-value=50 Score=33.53 Aligned_cols=53 Identities=23% Similarity=0.225 Sum_probs=34.7
Q ss_pred cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
.| +=-+.+|+|++-++..++. .++++-|++||.+ .+|+.|+.+..++-.+|.+
T Consensus 171 lP-~g~~~~v~g~~~~~~~L~~--~~~v~~V~fTGs~---~~g~~v~~~a~~~~~~v~l 223 (452)
T cd07102 171 LP-EGVFQVLHLSHETSAALIA--DPRIDHVSFTGSV---AGGRAIQRAAAGRFIKVGL 223 (452)
T ss_pred CC-cCcEEEEeCCchhHHHHhc--CCCCCEEEEECcH---HHHHHHHHHHHhcCCcEEE
Confidence 36 4447788876522333333 2567788888887 7888888877766666664
No 419
>PRK09126 hypothetical protein; Provisional
Probab=41.77 E-value=27 Score=33.87 Aligned_cols=32 Identities=25% Similarity=0.363 Sum_probs=27.1
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeechh
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICKD 235 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~ 235 (376)
.+|+..|+. =.|-+.|.+|.++|++|+++.+.
T Consensus 4 ~dviIvGgG---~aGl~~A~~L~~~G~~v~v~E~~ 35 (392)
T PRK09126 4 SDIVVVGAG---PAGLSFARSLAGSGLKVTLIERQ 35 (392)
T ss_pred ccEEEECcC---HHHHHHHHHHHhCCCcEEEEeCC
Confidence 468889888 56999999999999999996544
No 420
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=41.75 E-value=53 Score=33.81 Aligned_cols=54 Identities=17% Similarity=0.221 Sum_probs=34.9
Q ss_pred cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhc-CCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQ-MGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~-rgv~V~m 231 (376)
-| .=-+.+|+|..-.++-.|-. .++++-|++||.+ ++|+.|+....+ ...+|++
T Consensus 196 lP-~g~~~~v~g~~~~~~~~L~~-~~~vd~V~fTGs~---~~g~~v~~~aa~~~~~~~~l 250 (476)
T cd07091 196 FP-PGVVNIVPGFGPTAGAAISS-HMDVDKIAFTGST---AVGRTIMEAAAKSNLKKVTL 250 (476)
T ss_pred cC-CCcEEEEeCCChhHHHHHhc-CCCcCEEEEECcH---HHHHHHHHHHHhcCCceEEE
Confidence 36 33488888854333222222 2378889999988 889998887766 5556655
No 421
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=41.69 E-value=75 Score=24.79 Aligned_cols=40 Identities=18% Similarity=0.177 Sum_probs=29.6
Q ss_pred EEEeccCCchhHHHHHHHHHhcCC---cEEEe---echhHHHHHhhcCc
Q 017172 203 VLLRGTVTANKVANAVASSLCQMG---IKVAT---ICKDDYEKLKLRIP 245 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rg---v~V~m---~s~~~~~~l~~~~p 245 (376)
|-+.|.. ++|.|++..|.+.| .+|.+ -+.|+-+.++++.+
T Consensus 2 I~iIG~G---~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~ 47 (96)
T PF03807_consen 2 IGIIGAG---NMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG 47 (96)
T ss_dssp EEEESTS---HHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT
T ss_pred EEEECCC---HHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc
Confidence 3455777 99999999999999 99996 24445566666654
No 422
>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family. This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.
Probab=41.65 E-value=9.2 Score=27.83 Aligned_cols=8 Identities=63% Similarity=1.302 Sum_probs=6.3
Q ss_pred CCcchhhc
Q 017172 1 MPIYDYIY 8 (376)
Q Consensus 1 MPlyDyiy 8 (376)
||+|||.=
T Consensus 1 MP~Yey~C 8 (52)
T TIGR02605 1 MPIYEYRC 8 (52)
T ss_pred CCCEEEEe
Confidence 88888864
No 423
>cd06216 FNR_iron_sulfur_binding_2 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to for
Probab=41.44 E-value=45 Score=30.60 Aligned_cols=61 Identities=18% Similarity=0.306 Sum_probs=41.2
Q ss_pred eccCCCccEEEEcC-----CceehhhhhhcCCc-CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeechhH
Q 017172 171 ERQPNKLKIKVVDG-----SSLAAAVVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD 236 (376)
Q Consensus 171 ~k~P~~LrvrVVdG-----stLtaAvVln~IP~-~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~ 236 (376)
+++| ++++.++.. ..++.+.+-+.+|. ...+|+++|.. .+..++..+|-++|+. --++.|.
T Consensus 176 ~~~~-~~~~~~~~s~~~~~g~~~~~~l~~~~~~~~~~~vyvcGp~---~m~~~~~~~l~~~Gv~-~~i~~e~ 242 (243)
T cd06216 176 AQHP-NLRLHLLYTREELDGRLSAAHLDAVVPDLADRQVYACGPP---GFLDAAEELLEAAGLA-DRLHTER 242 (243)
T ss_pred HhCC-CeEEEEEEcCCccCCCCCHHHHHHhccCcccCeEEEECCH---HHHHHHHHHHHHCCCc-cceeecc
Confidence 4578 787765432 22455554444453 34599999998 7899999999999997 4334443
No 424
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=41.41 E-value=96 Score=30.65 Aligned_cols=98 Identities=19% Similarity=0.123 Sum_probs=59.6
Q ss_pred HhcCCeEEeecccccccccccccceeeeccCC-CccEEE-EcCCceeh-------hhhhhcC-CcCCceEEEeccCCchh
Q 017172 144 DAKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKV-VDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANK 213 (376)
Q Consensus 144 d~~GvKVlSLGlLNq~e~LN~~G~l~v~k~P~-~LrvrV-VdGstLta-------AvVln~I-P~~t~eVfL~G~~~~sK 213 (376)
+..|+|+++-=--|....|-..--+++--.|. ..-.-+ .||+.||+ |+-...+ +++.+.|.+.|+. .
T Consensus 63 ~~~g~K~~~~~p~N~~~glp~~~g~i~l~d~~tG~~~ai~~d~~~lT~~RTaa~~~laa~~la~~~~~~v~iiGaG---~ 139 (326)
T TIGR02992 63 DGFAIKVSPGFFDNPKLGLPSLNGMMVLLSSRTGLLQALLLDNGYLTDVRTAAAGAVAARHLAREDSSVVAIFGAG---M 139 (326)
T ss_pred CceEEEEecccCCccccCCCceeEEEEEEECCCCCceEEEcCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCC---H
Confidence 34788988854445544444444444544551 111233 48988863 1222223 6788899999998 7
Q ss_pred HHHHHHHHHh-cCCcE-EEee--chhHHHHHhhcC
Q 017172 214 VANAVASSLC-QMGIK-VATI--CKDDYEKLKLRI 244 (376)
Q Consensus 214 v~~AiA~~LC-~rgv~-V~m~--s~~~~~~l~~~~ 244 (376)
.|++++.+|+ .++++ |.+. +.++-+.+.+++
T Consensus 140 qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~ 174 (326)
T TIGR02992 140 QARLQLEALTLVRDIRSARIWARDSAKAEALALQL 174 (326)
T ss_pred HHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHH
Confidence 9999999999 57865 5553 334555555443
No 425
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=41.40 E-value=51 Score=24.32 Aligned_cols=21 Identities=29% Similarity=0.371 Sum_probs=18.9
Q ss_pred hHHHHHHHHHhcCCcEEEeec
Q 017172 213 KVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 213 Kv~~AiA~~LC~rgv~V~m~s 233 (376)
-++..+|..|.++|.+|++++
T Consensus 14 t~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 14 TLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred HHHHHHHHHHHHCCCeEEEEC
Confidence 589999999999999999965
No 426
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=41.33 E-value=51 Score=34.93 Aligned_cols=109 Identities=17% Similarity=0.155 Sum_probs=59.2
Q ss_pred eEEeeccCceec-cchhhhHHHHHHHHHHHHHHhcCCeEEeecccccccccccccceeeec--cCCCccEEEEcCCceeh
Q 017172 113 TWVVPRYIVQYN-LPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLER--QPNKLKIKVVDGSSLAA 189 (376)
Q Consensus 113 tWviPRy~fqY~-l~~~~~~IN~lIE~AIl~Ad~~GvKVlSLGlLNq~e~LN~~G~l~v~k--~P~~LrvrVVdGstLta 189 (376)
+...|.+|+=.. .||-. .++-.+ ..+.-|=..|-.|+==---+---.--.=.+++.+. .| .=-+.+|.|+.
T Consensus 139 ~~~~P~~GVv~~I~pwN~-P~~~~~-~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP-~gv~~~v~g~~--- 212 (513)
T cd07128 139 HILTPRRGVAVHINAFNF-PVWGML-EKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLP-EGALQLICGSV--- 212 (513)
T ss_pred EEEEecccEEEEECCccc-HHHHHH-HHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCC-CCcEEEecCCh---
Confidence 334565555332 24433 232222 44556667777666211111000000012334444 47 44588998863
Q ss_pred hhhhhcCCcCCceEEEeccCCchhHHHHHHHHH--hcCCcEEEe
Q 017172 190 AVVVNSLPKTTAHVLLRGTVTANKVANAVASSL--CQMGIKVAT 231 (376)
Q Consensus 190 AvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~L--C~rgv~V~m 231 (376)
+.+...+| +.+-|.+||++ ++|+.|+.+. .+++.+|.+
T Consensus 213 ~~~~~~l~-~~d~v~fTGS~---~~G~~i~~~a~~a~~~~~~~l 252 (513)
T cd07128 213 GDLLDHLG-EQDVVAFTGSA---ATAAKLRAHPNIVARSIRFNA 252 (513)
T ss_pred HHHhcccC-CCCEEEEECCH---HHHHHHHHHhhhhccCceEEE
Confidence 23555554 56789999999 9999999874 367777764
No 427
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=41.20 E-value=47 Score=36.26 Aligned_cols=105 Identities=15% Similarity=0.155 Sum_probs=59.8
Q ss_pred eeEEeeccCcee-ccchhhhHHHHHHHHHHHHHHhcCCeEEeeccccccccccc-c----cceeeec--cCCCccEEEEc
Q 017172 112 QTWVVPRYIVQY-NLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNR-N----GEIYLER--QPNKLKIKVVD 183 (376)
Q Consensus 112 qtWviPRy~fqY-~l~~~~~~IN~lIE~AIl~Ad~~GvKVlSLGlLNq~e~LN~-~----G~l~v~k--~P~~LrvrVVd 183 (376)
.+...|+.|+=. ..||-. .++- .-..|.-|=..|--||= |-.+... . .+++.+. .| +=-+-+|.
T Consensus 142 ~~~~~p~~GVv~~I~PwNf-P~~~-~~~~i~pALaaGN~VV~-----KPse~tp~~a~~l~~~~~eaG~~P-~gv~~vv~ 213 (675)
T PRK11563 142 RHILTPLEGVAVHINAFNF-PVWG-MLEKLAPAFLAGVPAIV-----KPATATAYLTEAVVRLIVESGLLP-EGALQLIC 213 (675)
T ss_pred eEEEeecCceEEEECCCch-HHHH-HHHHHHHHHHcCCeEEE-----ECCCCCcHHHHHHHHHHHHcCCCC-CCcEEEee
Confidence 344556545433 224433 2222 23445567777887763 2111111 1 2333343 47 44489999
Q ss_pred CCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHH-h-cCCcEEEe
Q 017172 184 GSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSL-C-QMGIKVAT 231 (376)
Q Consensus 184 GstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~L-C-~rgv~V~m 231 (376)
|+ +..++..+| +.+.|.+||++ ++|+.|+.+. | ++..+|.+
T Consensus 214 g~---~~~~~~~~~-~i~~v~FTGS~---~~G~~i~~~~~a~~~~~~~~l 256 (675)
T PRK11563 214 GS---AGDLLDHLD-GQDVVTFTGSA---ATAQKLRAHPNVVANSVPFTA 256 (675)
T ss_pred CC---HHHHhhcCC-CCCEEEEECcH---HHHHHHHhhhhhhhCCceEEE
Confidence 86 223455544 67899999998 9999999863 2 66777654
No 428
>PRK13912 nuclease NucT; Provisional
Probab=41.18 E-value=1e+02 Score=27.74 Aligned_cols=102 Identities=18% Similarity=0.187 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHhcCCeEEeeccccccccccccc--ceeeeccCCCccEEEEcCCceehhhhhhcCC-c---CCceEEEec
Q 017172 134 SLIEEAILEADAKGVKVISLGLLNQGEELNRNG--EIYLERQPNKLKIKVVDGSSLAAAVVVNSLP-K---TTAHVLLRG 207 (376)
Q Consensus 134 ~lIE~AIl~Ad~~GvKVlSLGlLNq~e~LN~~G--~l~v~k~P~~LrvrVVdGstLtaAvVln~IP-~---~t~eVfL~G 207 (376)
.-|-+|+.+|-++||+|==|- ......+... .-|..++| +++++..+|......--.+.+. | =..++.++|
T Consensus 59 ~~i~~aL~~Aa~RGV~VrIll--d~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~H~K~~viD~~~~~iG 135 (177)
T PRK13912 59 KDIAKALKSAAKRGVKISIIY--DYESNHNNDQSTIGYLDKYP-NIKVCLLKGLKAKNGKYYGIMHQKVAIIDDKIVVLG 135 (177)
T ss_pred HHHHHHHHHHHHCCCEEEEEE--eCccccCcchhHHHHHHhCC-CceEEEecCccccCcccccccceeEEEEcCCEEEEe
Confidence 457788888889999986542 2111111111 12566777 7777777765321110001111 1 023677888
Q ss_pred cCCchhHHHHHHHHHhcCCcEEEeechhHHHHHhhc
Q 017172 208 TVTANKVANAVASSLCQMGIKVATICKDDYEKLKLR 243 (376)
Q Consensus 208 ~~~~sKv~~AiA~~LC~rgv~V~m~s~~~~~~l~~~ 243 (376)
+.+-++- ..-..+++-+++.+++-.+++++.
T Consensus 136 S~N~t~~-----s~~~N~E~~lii~d~~~~~~~~~~ 166 (177)
T PRK13912 136 SANWSKN-----AFENNYEVLLITDDTETILKAKEY 166 (177)
T ss_pred CCCCChh-----HhccCCceEEEECCHHHHHHHHHH
Confidence 8763331 112345555566666655555543
No 429
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=41.13 E-value=39 Score=33.11 Aligned_cols=31 Identities=32% Similarity=0.334 Sum_probs=25.6
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCc-EEEeec
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGI-KVATIC 233 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv-~V~m~s 233 (376)
-+.|++.|+.+ .||||+.+|.+.|+ +|.+.+
T Consensus 127 ~k~vlilGaGG---aarAi~~aL~~~g~~~i~i~n 158 (283)
T PRK14027 127 LDSVVQVGAGG---VGNAVAYALVTHGVQKLQVAD 158 (283)
T ss_pred CCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEc
Confidence 36899999996 59999999999998 465644
No 430
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=41.05 E-value=45 Score=34.41 Aligned_cols=53 Identities=19% Similarity=0.271 Sum_probs=32.6
Q ss_pred cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
-| .=-+.+|.|+.-++..++. -++.+-|++||++ ++|++|+.+..+.+.+|++
T Consensus 197 lP-~gvv~~v~g~~~~~~~L~~--~~~v~~V~fTGS~---~~G~~i~~~aa~~~~~~~l 249 (477)
T cd07113 197 IP-DGVLNVVNGKGAVGAQLIS--HPDVAKVSFTGSV---ATGKKIGRQAASDLTRVTL 249 (477)
T ss_pred cC-CCcEEEEecCchHHHHHhc--CCCCCEEEEECcH---HHHHHHHHHHHhhcCceEe
Confidence 36 4447777775422222222 3466778888887 7788888776666666544
No 431
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=41.00 E-value=57 Score=33.50 Aligned_cols=49 Identities=16% Similarity=0.253 Sum_probs=26.3
Q ss_pred EEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 179 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 179 vrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.+|+|..-.+.-.|-+ .++++-|++||.+ ++|+.|+.+..++..+|++
T Consensus 190 v~~v~g~~~~~~~~l~~-~~~v~~v~fTGs~---~~g~~i~~~aa~~~~~v~l 238 (466)
T cd07138 190 FNLVNGDGPVVGEALSA-HPDVDMVSFTGST---RAGKRVAEAAADTVKRVAL 238 (466)
T ss_pred EEEEeCCchhHHHHHhc-CCCCCEEEEECcH---HHHHHHHHHHhccCCeEEE
Confidence 66666543211111111 1356667777766 6777777666655555544
No 432
>PRK06849 hypothetical protein; Provisional
Probab=40.92 E-value=43 Score=33.23 Aligned_cols=34 Identities=21% Similarity=0.145 Sum_probs=28.2
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeechh
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD 235 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~ 235 (376)
.+.|++||+.. =+|..+|.+|.+.|++|++.+..
T Consensus 4 ~~~VLI~G~~~--~~~l~iar~l~~~G~~Vi~~d~~ 37 (389)
T PRK06849 4 KKTVLITGARA--PAALELARLFHNAGHTVILADSL 37 (389)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCC
Confidence 46799999884 47899999999999999994433
No 433
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=40.75 E-value=56 Score=31.34 Aligned_cols=39 Identities=15% Similarity=0.319 Sum_probs=31.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee--chhHHHHHhh
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKL 242 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~--s~~~~~~l~~ 242 (376)
+.|-+.|.. .+|.+||..|.+.|++|.++ +.+.-+++++
T Consensus 5 ~~I~vIGaG---~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~ 45 (311)
T PRK06130 5 QNLAIIGAG---TMGSGIAALFARKGLQVVLIDVMEGALERARG 45 (311)
T ss_pred cEEEEECCC---HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence 568889998 89999999999999999984 3445555544
No 434
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=40.74 E-value=41 Score=29.88 Aligned_cols=29 Identities=17% Similarity=0.334 Sum_probs=23.4
Q ss_pred EEEeccCCchhHHHHHHHHHhcCCc-EEEeec
Q 017172 203 VLLRGTVTANKVANAVASSLCQMGI-KVATIC 233 (376)
Q Consensus 203 VfL~G~~~~sKv~~AiA~~LC~rgv-~V~m~s 233 (376)
+++||.++ .+|..+|.+|.++|. +|++++
T Consensus 3 ylitGG~g--glg~~la~~La~~~~~~~il~~ 32 (181)
T PF08659_consen 3 YLITGGLG--GLGQSLARWLAERGARRLILLG 32 (181)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTT-SEEEEEE
T ss_pred EEEECCcc--HHHHHHHHHHHHcCCCEEEEec
Confidence 68899996 899999999999965 555544
No 435
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=40.70 E-value=34 Score=34.55 Aligned_cols=30 Identities=20% Similarity=0.211 Sum_probs=26.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+.|.++|.. +.|.++|.+|.++|.+|.+.+
T Consensus 6 ~~~~v~G~g---~~G~~~a~~l~~~g~~v~~~d 35 (445)
T PRK04308 6 KKILVAGLG---GTGISMIAYLRKNGAEVAAYD 35 (445)
T ss_pred CEEEEECCC---HHHHHHHHHHHHCCCEEEEEe
Confidence 579999987 899999999999999999943
No 436
>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin. This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.
Probab=40.68 E-value=70 Score=24.84 Aligned_cols=47 Identities=15% Similarity=0.209 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhcCCeEEeecccccccccccccceeeeccCCCccEEEEcCC
Q 017172 134 SLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGS 185 (376)
Q Consensus 134 ~lIE~AIl~Ad~~GvKVlSLGlLNq~e~LN~~G~l~v~k~P~~LrvrVVdGs 185 (376)
..++++..++.+.|+++.. .....-++|.-+.-++|++.++.++.|+
T Consensus 66 ~d~~~~~~~l~~~G~~~~~-----~~~~~~~~~~~~~~~DPdG~~iEi~~~~ 112 (113)
T cd08345 66 EEFDEYTERLKALGVEMKP-----ERPRVQGEGRSIYFYDPDGHLLELHAGT 112 (113)
T ss_pred HHHHHHHHHHHHcCCccCC-----CccccCCCceEEEEECCCCCEEEEEeCc
Confidence 4577888888899999753 1122234677777899988888888775
No 437
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=40.67 E-value=77 Score=29.85 Aligned_cols=30 Identities=27% Similarity=0.400 Sum_probs=26.3
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
+++.+.|+. .+|+.+|..|.++|..|+.+.
T Consensus 1 m~iiIiG~G---~vG~~va~~L~~~g~~Vv~Id 30 (225)
T COG0569 1 MKIIIIGAG---RVGRSVARELSEEGHNVVLID 30 (225)
T ss_pred CEEEEECCc---HHHHHHHHHHHhCCCceEEEE
Confidence 467888988 999999999999999999943
No 438
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=40.61 E-value=59 Score=33.27 Aligned_cols=52 Identities=17% Similarity=0.232 Sum_probs=29.4
Q ss_pred CCCccEEEEcCCcee-hhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 174 PNKLKIKVVDGSSLA-AAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 174 P~~LrvrVVdGstLt-aAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
| +=-+.+|+|..-. +..++. .++.+-|++||.+ ++|+.|+....+.+.+|.+
T Consensus 171 P-~gvv~~v~g~~~~~~~~l~~--~~~i~~v~fTGs~---~~g~~i~~~aa~~~~~~~l 223 (456)
T cd07107 171 P-PGVFNILPGDGATAGAALVR--HPDVKRIALIGSV---PTGRAIMRAAAEGIKHVTL 223 (456)
T ss_pred C-cCcEEEEeCCCchHHHHHhc--CCCCCEEEEECcH---HHHHHHHHHHhcCCCeEEE
Confidence 5 4446666664432 222221 3456667777776 6777777776565666544
No 439
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=40.58 E-value=51 Score=33.71 Aligned_cols=52 Identities=12% Similarity=0.151 Sum_probs=27.8
Q ss_pred CccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 176 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 176 ~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
.=-+.+|.|+.-.++..|-. .++.+-|++||.+ .+|+.|+.+..++..+|.+
T Consensus 190 ~gvv~~v~g~~~~~~~~l~~-~~~v~~V~ftGs~---~~g~~i~~~aa~~~~~~~l 241 (468)
T cd07088 190 AGVLNIVTGRGSVVGDALVA-HPKVGMISLTGST---EAGQKIMEAAAENITKVSL 241 (468)
T ss_pred ccceEEEecCchHHHHHHhc-CCCCCEEEEECcH---HHHHHHHHHHHhcCCcEEE
Confidence 44466666654322222222 2256667777766 6677776665555555544
No 440
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=40.57 E-value=1e+02 Score=27.71 Aligned_cols=42 Identities=21% Similarity=0.307 Sum_probs=31.5
Q ss_pred CCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEee--chhHHHHH
Q 017172 196 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKL 240 (376)
Q Consensus 196 IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~--s~~~~~~l 240 (376)
++++ +.|+++|+.+ =+|.+++..+..+|.+|.+. +.++.+.+
T Consensus 137 ~~~~-~~vlv~g~~~--~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~ 180 (323)
T cd05276 137 LKAG-ETVLIHGGAS--GVGTAAIQLAKALGARVIATAGSEEKLEAC 180 (323)
T ss_pred CCCC-CEEEEEcCcC--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 3444 6899999874 59999999999999998883 33445555
No 441
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=40.53 E-value=40 Score=35.25 Aligned_cols=93 Identities=16% Similarity=0.203 Sum_probs=54.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHh-cCCcEEEe-echh----HHHHHhhcCchhhccceeeecccccCcceE-EEEcC---
Q 017172 201 AHVLLRGTVTANKVANAVASSLC-QMGIKVAT-ICKD----DYEKLKLRIPVEAQHNLVLSTSYAAHKTKI-WLVGD--- 270 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC-~rgv~V~m-~s~~----~~~~l~~~~p~~~~~~Lv~~t~y~a~~~K~-WlVG~--- 270 (376)
+.|||||+|+ =+|+-+...|- ++..+|.+ +..+ -.++|++-++ .+...-..| ..+| -++||
T Consensus 1 ~~vlLTGATG--FLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~----~~~~~~e~~---~~ri~vv~gDl~e 71 (382)
T COG3320 1 RNVLLTGATG--FLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFD----LYRHWDELS---ADRVEVVAGDLAE 71 (382)
T ss_pred CeEEEecCch--HhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhh----hhhhhhhhh---cceEEEEeccccc
Confidence 3699999998 89977666665 55779888 3322 3556655543 222211123 2255 66676
Q ss_pred ---CCCHHHhhcCCC--------C---ceeeeccc-CCCc----C--ccCCcc
Q 017172 271 ---DLTGKEQARAPK--------G---TIFIPYTQ-IPPR----K--LRKDCF 302 (376)
Q Consensus 271 ---~l~~~eQ~~Ap~--------G---t~Fipfsq-fPp~----~--~R~DCt 302 (376)
+|+++.-+.-+. | -|+.|||+ ++|. + +|.+|+
T Consensus 72 ~~lGL~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~ 124 (382)
T COG3320 72 PDLGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAAT 124 (382)
T ss_pred ccCCCCHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhc
Confidence 455555444443 1 24678888 5555 1 677777
No 442
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=40.49 E-value=53 Score=33.80 Aligned_cols=89 Identities=16% Similarity=0.059 Sum_probs=50.4
Q ss_pred HHHHHHHhcCCeEEeecccccccccccccceeeeccCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHH
Q 017172 138 EAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANA 217 (376)
Q Consensus 138 ~AIl~Ad~~GvKVlSLGlLNq~e~LN~~G~l~v~k~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~A 217 (376)
..|.-|=+.|-.||==.--..-..-..=.+++.+.-| .=-+.+|.|+.-.+...|-+ -++.+-|++||++ .+|+.
T Consensus 157 ~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~alP-~gv~~~v~g~~~~~~~~l~~-~~~vd~V~fTGs~---~~g~~ 231 (475)
T PRK13473 157 WKLAPALAAGNTVVLKPSEITPLTALKLAELAADILP-PGVLNVVTGRGATVGDALVG-HPKVRMVSLTGSI---ATGKH 231 (475)
T ss_pred HHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHhCC-cCcEEEEecCchHHHHHHhc-CCCCCEEEEECcH---HHHHH
Confidence 3445666777777721111110000001223333357 44588898854333333322 2378899999988 88999
Q ss_pred HHHHHhcCCcEEEe
Q 017172 218 VASSLCQMGIKVAT 231 (376)
Q Consensus 218 iA~~LC~rgv~V~m 231 (376)
|+....++..++.+
T Consensus 232 i~~~aa~~~~~~~l 245 (475)
T PRK13473 232 VLSAAADSVKRTHL 245 (475)
T ss_pred HHHHHhhcCCcEEE
Confidence 98887777777764
No 443
>PRK00779 ornithine carbamoyltransferase; Provisional
Probab=40.46 E-value=88 Score=31.10 Aligned_cols=95 Identities=22% Similarity=0.277 Sum_probs=67.1
Q ss_pred HHHhcCCeEEeec----cccccccc-------ccccceeeeccCC---------CccEEEEcCCc--------ee-hhhh
Q 017172 142 EADAKGVKVISLG----LLNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS--------LA-AAVV 192 (376)
Q Consensus 142 ~Ad~~GvKVlSLG----lLNq~e~L-------N~~G~l~v~k~P~---------~LrvrVVdGst--------Lt-aAvV 192 (376)
-|.+.|.+|+.|+ -++|+|+| +.++-++|-|||. ..++=|+++-+ |+ ...+
T Consensus 64 A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~~l~~~~D~iv~R~~~~~~~~~~a~~~~vPVINag~~~~HPtQaL~Dl~Ti 143 (304)
T PRK00779 64 GMAQLGGHAIFLSPRDTQLGRGEPIEDTARVLSRYVDAIMIRTFEHETLEELAEYSTVPVINGLTDLSHPCQILADLLTI 143 (304)
T ss_pred HHHHcCCcEEEECcccccCCCCcCHHHHHHHHHHhCCEEEEcCCChhHHHHHHHhCCCCEEeCCCCCCChHHHHHHHHHH
Confidence 4678999999985 35677764 6668888999982 35677888754 11 1223
Q ss_pred hhcCCc-CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeechhHHH
Q 017172 193 VNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE 238 (376)
Q Consensus 193 ln~IP~-~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~~~ 238 (376)
...... .-..|-+.|.. +.+++..+..|.+-|++|.+.+.+.|+
T Consensus 144 ~e~~g~l~gl~i~~vGd~--~~v~~Sl~~~l~~~g~~v~~~~P~~~~ 188 (304)
T PRK00779 144 YEHRGSLKGLKVAWVGDG--NNVANSLLLAAALLGFDLRVATPKGYE 188 (304)
T ss_pred HHHhCCcCCcEEEEEeCC--CccHHHHHHHHHHcCCEEEEECCcccC
Confidence 333332 11368889996 589999999999999999997776664
No 444
>PRK08291 ectoine utilization protein EutC; Validated
Probab=40.46 E-value=1.2e+02 Score=30.01 Aligned_cols=96 Identities=16% Similarity=0.062 Sum_probs=56.5
Q ss_pred hcCCeEEeecccccccccccccceeeeccCCCccEE-E-EcCCceeh-----hhhhhc--C-CcCCceEEEeccCCchhH
Q 017172 145 AKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIK-V-VDGSSLAA-----AVVVNS--L-PKTTAHVLLRGTVTANKV 214 (376)
Q Consensus 145 ~~GvKVlSLGlLNq~e~LN~~G~l~v~k~P~~Lrvr-V-VdGstLta-----AvVln~--I-P~~t~eVfL~G~~~~sKv 214 (376)
..|+|+++.---|-...|-.---.++--.|..=.+. | .||+.||+ +..+.. + +++.+.|.+.|+. ..
T Consensus 67 ~~g~K~~~~~~~N~~~glp~~~g~i~l~d~~tG~~~ai~~d~~~lt~~rT~a~~~~a~~~la~~~~~~v~IiGaG---~~ 143 (330)
T PRK08291 67 SFAIKVSPGFFDNPKLGLPSLNGLMVVLSARTGLVEALLLDNGYLTDVRTAAAGAVAARHLAREDASRAAVIGAG---EQ 143 (330)
T ss_pred eeEEEeccCCCCccccCCCcceEEEEEEeCCCCceEEEEcCCchHHHHHHHHHHHHHHHHhCCCCCCEEEEECCC---HH
Confidence 378888875544554444333334443444111233 2 48988863 122211 2 6788899999998 78
Q ss_pred HHHHHHHHhc-CCcE-EEe--echhHHHHHhhc
Q 017172 215 ANAVASSLCQ-MGIK-VAT--ICKDDYEKLKLR 243 (376)
Q Consensus 215 ~~AiA~~LC~-rgv~-V~m--~s~~~~~~l~~~ 243 (376)
|++++.+|+. ++++ |.+ -+.++-+.+.++
T Consensus 144 a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~ 176 (330)
T PRK08291 144 ARLQLEALTLVRPIREVRVWARDAAKAEAYAAD 176 (330)
T ss_pred HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHH
Confidence 9999999995 6654 555 344455555554
No 445
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=40.36 E-value=51 Score=32.88 Aligned_cols=44 Identities=16% Similarity=0.160 Sum_probs=34.6
Q ss_pred eehhhhhhcC-----CcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 187 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 187 LtaAvVln~I-----P~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
-|+++|+.-| +-.-+.|++.|... =||+.+|..|.++|..|.+.
T Consensus 140 cTp~ai~~ll~~~~i~l~Gk~vvVIGrs~--~VG~pla~lL~~~gatVtv~ 188 (286)
T PRK14175 140 CTPLGIMEILKHADIDLEGKNAVVIGRSH--IVGQPVSKLLLQKNASVTIL 188 (286)
T ss_pred CcHHHHHHHHHHcCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCeEEEE
Confidence 3566665433 44668999999982 49999999999999999993
No 446
>TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Members of this protein are L-seryl-tRNA(Sec) kinase. This enzyme is part of a two-step pathway in Eukaryota and Archaea for performing selenocysteine biosynthesis by changing serine misacylated on selenocysteine-tRNA to selenocysteine. This enzyme performs the first step, phosphorylation of the OH group of the serine side chain. This family represents archaeal proteins with this activity.
Probab=40.22 E-value=46 Score=30.99 Aligned_cols=35 Identities=23% Similarity=0.329 Sum_probs=26.8
Q ss_pred EEEeccCCchh--HHHHHHHHHhcCCcEEEeechhHH
Q 017172 203 VLLRGTVTANK--VANAVASSLCQMGIKVATICKDDY 237 (376)
Q Consensus 203 VfL~G~~~~sK--v~~AiA~~LC~rgv~V~m~s~~~~ 237 (376)
|+|+|-.++-| +|+++|.+|.++|+.|..++.|..
T Consensus 2 Ivl~G~pGSGKST~a~~La~~l~~~~~~v~~i~~D~l 38 (249)
T TIGR03574 2 IILTGLPGVGKSTFSKELAKKLSEKNIDVIILGTDLI 38 (249)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHHcCCceEEEccHHH
Confidence 57777665445 899999999999999888676644
No 447
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=40.22 E-value=51 Score=33.54 Aligned_cols=52 Identities=17% Similarity=0.222 Sum_probs=33.1
Q ss_pred CCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 174 PNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 174 P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
| +=-+.+|+|..-+...++ + .++.+-|++||.+ ++|+.|+....++..++.+
T Consensus 169 P-~g~~~~v~g~~~~~~~l~-~-~~~vd~V~fTGs~---~~g~~v~~~aa~~~~~~~l 220 (446)
T cd07106 169 P-PGVLNVVSGGDELGPALT-S-HPDIRKISFTGST---ATGKKVMASAAKTLKRVTL 220 (446)
T ss_pred C-cCeEEEeeCChhHHHHHh-c-CCCCCEEEEECCH---HHHHHHHHHHHhcCCeeEE
Confidence 5 344677777532222222 2 2367888999988 8888888887766666654
No 448
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=40.15 E-value=61 Score=33.50 Aligned_cols=91 Identities=15% Similarity=0.082 Sum_probs=49.7
Q ss_pred HHHHHHHHHhcCCeEEeecccccccccccccceeeec-cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhH
Q 017172 136 IEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLER-QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKV 214 (376)
Q Consensus 136 IE~AIl~Ad~~GvKVlSLGlLNq~e~LN~~G~l~v~k-~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv 214 (376)
.-..|.-|=+.|--||==.--.-...-..=.+++.+. -| +=-+.+|+|..-.+.-.|-. .++.+-|++||.+ .+
T Consensus 161 ~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP-~gv~~~v~g~~~~~~~~L~~-~~~vd~V~fTGS~---~~ 235 (484)
T cd07144 161 AAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFP-PGVVNIIPGYGAVAGSALAE-HPDVDKIAFTGST---AT 235 (484)
T ss_pred HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcC-CCcEEEEecCCchHHHHHhc-CCCcCEEEEECcH---HH
Confidence 3344555666777765221110000000012333333 46 66688888854332222222 2378889999998 89
Q ss_pred HHHHHHHHhcCCcEEEe
Q 017172 215 ANAVASSLCQMGIKVAT 231 (376)
Q Consensus 215 ~~AiA~~LC~rgv~V~m 231 (376)
|++|+.+..++..+|++
T Consensus 236 g~~i~~~a~~~~~~~~l 252 (484)
T cd07144 236 GRLVMKAAAQNLKAVTL 252 (484)
T ss_pred HHHHHHHHHhcCCeEEE
Confidence 99999877666666644
No 449
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=40.13 E-value=58 Score=31.36 Aligned_cols=39 Identities=26% Similarity=0.313 Sum_probs=29.5
Q ss_pred CcCCceEEEeccCCchh--HHHHHHHHHhcCCcEEEeechh
Q 017172 197 PKTTAHVLLRGTVTANK--VANAVASSLCQMGIKVATICKD 235 (376)
Q Consensus 197 P~~t~eVfL~G~~~~sK--v~~AiA~~LC~rgv~V~m~s~~ 235 (376)
++.-.-|.|||=.++-| ||.|++..|-++|++|.+++-|
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGD 60 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGD 60 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecCh
Confidence 33334678898665445 9999999999999999985443
No 450
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=40.09 E-value=49 Score=33.79 Aligned_cols=30 Identities=23% Similarity=0.201 Sum_probs=14.4
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.+-|++||.+ .+|+.|+.+..+...+|++
T Consensus 194 ~v~~v~fTGs~---~~g~~i~~~aa~~~~~~~l 223 (457)
T cd07090 194 DVAKVSFTGSV---PTGKKVMSAAAKGIKHVTL 223 (457)
T ss_pred CCCEEEEECcH---HHHHHHHHHHhccCCceEE
Confidence 44455555554 4555555544444444433
No 451
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=40.03 E-value=26 Score=30.21 Aligned_cols=25 Identities=36% Similarity=0.433 Sum_probs=20.2
Q ss_pred hhHHHHHHHHHHHHHHhcCCeEEee
Q 017172 129 REAINSLIEEAILEADAKGVKVISL 153 (376)
Q Consensus 129 ~~~IN~lIE~AIl~Ad~~GvKVlSL 153 (376)
.-+-|..+-+|+..|.++|++||.|
T Consensus 112 ~SG~s~~vi~a~~~Ak~~G~~vIal 136 (138)
T PF13580_consen 112 NSGNSPNVIEAAEEAKERGMKVIAL 136 (138)
T ss_dssp SSS-SHHHHHHHHHHHHTT-EEEEE
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 3456788999999999999999987
No 452
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=39.99 E-value=54 Score=33.46 Aligned_cols=48 Identities=23% Similarity=0.306 Sum_probs=27.3
Q ss_pred EEEEcCCcee-hhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 179 IKVVDGSSLA-AAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 179 vrVVdGstLt-aAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.+|.|+.-. +..++ =.++++-|++||.+ ++|+.|+.+..+++.+|++
T Consensus 177 ~~~v~g~~~~~~~~L~--~~~~v~~v~ftGs~---~~g~~i~~~aa~~~~p~~l 225 (454)
T cd07109 177 LNVVTGLGAEAGAALV--AHPGVDHISFTGSV---ETGIAVMRAAAENVVPVTL 225 (454)
T ss_pred eEEEecCchHHHHHHh--cCCCCCEEEEECCH---HHHHHHHHHHhhcCCcEEE
Confidence 5666664321 12222 13456677777766 6777777766666666644
No 453
>PRK05868 hypothetical protein; Validated
Probab=39.91 E-value=34 Score=33.82 Aligned_cols=30 Identities=23% Similarity=0.258 Sum_probs=26.5
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
++|+..|+. =.|-+.|.+|.++|++|+++.
T Consensus 2 ~~V~IvGgG---~aGl~~A~~L~~~G~~v~viE 31 (372)
T PRK05868 2 KTVVVSGAS---VAGTAAAYWLGRHGYSVTMVE 31 (372)
T ss_pred CeEEEECCC---HHHHHHHHHHHhCCCCEEEEc
Confidence 478899988 789999999999999999943
No 454
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=39.84 E-value=57 Score=31.16 Aligned_cols=39 Identities=21% Similarity=0.254 Sum_probs=30.2
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEee--chhHHHHHh
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLK 241 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~--s~~~~~~l~ 241 (376)
.+.|-+.|+. -+|.+||..|.+.|.+|.+. +.+.-++++
T Consensus 3 ~~kIaViGaG---~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~ 43 (287)
T PRK08293 3 IKNVTVAGAG---VLGSQIAFQTAFHGFDVTIYDISDEALEKAK 43 (287)
T ss_pred ccEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence 3578888987 79999999999999999994 444444443
No 455
>cd06209 BenDO_FAD_NAD Benzoate dioxygenase reductase (BenDO) FAD/NAD binding domain. Oxygenases oxidize hydrocarbons using dioxygen as the oxidant. As a Class I bacterial dioxygenases, benzoate dioxygenase like proteins combine an [2Fe-2S] cluster containing N-terminal ferredoxin at the end fused to an FAD/NADP(P) domain. In dioxygenase FAD/NAD(P) binding domain, the reductase transfers 2 electrons from NAD(P)H to the oxygenase which insert into an aromatic substrate, an initial step in microbial aerobic degradation of aromatic rings. Flavin oxidoreductases use flavins as substrates, unlike flavoenzymes which have a flavin prosthetic group.
Probab=39.64 E-value=57 Score=29.54 Aligned_cols=54 Identities=26% Similarity=0.322 Sum_probs=36.4
Q ss_pred eccCCCccEEEEcC-------Cc-eehhhhhhc-CCcCCceEEEeccCCchhHHHHHHHHHhcCCcE
Q 017172 171 ERQPNKLKIKVVDG-------SS-LAAAVVVNS-LPKTTAHVLLRGTVTANKVANAVASSLCQMGIK 228 (376)
Q Consensus 171 ~k~P~~LrvrVVdG-------st-LtaAvVln~-IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~ 228 (376)
+++| ++++.++.. .. .....+... ++.+..+|+++|.. .+.+++..+|.++|+.
T Consensus 156 ~~~~-~~~~~~~~s~~~~~~~~~g~v~~~~~~~~~~~~~~~v~icGp~---~m~~~~~~~l~~~G~~ 218 (228)
T cd06209 156 ERLP-GFSFRTVVADPDSWHPRKGYVTDHLEAEDLNDGDVDVYLCGPP---PMVDAVRSWLDEQGIE 218 (228)
T ss_pred HhCC-CeEEEEEEcCCCccCCCcCCccHHHHHhhccCCCcEEEEeCCH---HHHHHHHHHHHHcCCC
Confidence 4678 787776532 11 122233333 45455579999988 7899999999999984
No 456
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=39.56 E-value=1.6e+02 Score=25.87 Aligned_cols=40 Identities=20% Similarity=0.229 Sum_probs=29.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEee-c-hhHHHHHhh
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATI-C-KDDYEKLKL 242 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~-s-~~~~~~l~~ 242 (376)
..|++.|..+ -+|.+++..+..+|++|.+. + .++.+.++.
T Consensus 110 ~~vlv~g~~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 151 (293)
T cd05195 110 ESVLIHAAAG--GVGQAAIQLAQHLGAEVFATVGSEEKREFLRE 151 (293)
T ss_pred CEEEEecCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 5788888774 89999999888999999883 2 344444443
No 457
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=39.46 E-value=58 Score=33.43 Aligned_cols=29 Identities=24% Similarity=0.311 Sum_probs=14.4
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEE
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVA 230 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~ 230 (376)
+.+-|++||.+ ++|+.|+....++..+|+
T Consensus 198 ~v~~v~ftGs~---~~g~~i~~~aa~~~~~~~ 226 (454)
T cd07118 198 DVDMVSFTGST---RVGKAIAAAAARNLKKVS 226 (454)
T ss_pred CCCEEEEECcH---HHHHHHHHHHHhcCCcEE
Confidence 44555555554 455555555444444443
No 458
>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
Probab=39.44 E-value=37 Score=33.00 Aligned_cols=32 Identities=28% Similarity=0.340 Sum_probs=27.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeechh
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICKD 235 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~ 235 (376)
-+|...|+. -.|.+.|.+|.++|++|+++.+.
T Consensus 6 ~dViIvGgG---~aGl~~A~~La~~G~~V~liE~~ 37 (391)
T PRK08020 6 TDIAIVGGG---MVGAALALGLAQHGFSVAVLEHA 37 (391)
T ss_pred ccEEEECcC---HHHHHHHHHHhcCCCEEEEEcCC
Confidence 478899998 78999999999999999996543
No 459
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=39.31 E-value=50 Score=34.14 Aligned_cols=48 Identities=15% Similarity=0.133 Sum_probs=24.9
Q ss_pred EEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 179 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 179 vrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.+|.|..-+...++. .++.+-|++||.+ ++|+.|+.+..++-.++++
T Consensus 196 ~~~v~g~~~~~~~L~~--~~~vd~V~fTGs~---~~g~~i~~~aa~~~~~~~l 243 (474)
T cd07130 196 ASLVCGGADVGEALVK--DPRVPLVSFTGST---AVGRQVGQAVAARFGRSLL 243 (474)
T ss_pred EEEEeCChhHHHHHhc--CCCCCEEEEECch---HHHHHHHHHHHhcCCCEEE
Confidence 6666654322222221 2456666777766 6666666655555444433
No 460
>cd02035 ArsA ArsA ATPase functionas as an efflux pump located on the inner membrane of the cell. This ATP-driven oxyanion pump catalyzes the extrusion of arsenite, antimonite and arsenate. Maintenance of a low intracellular concentration of oxyanion produces resistance to the toxic agents. The pump is composed of two subunits, the catalytic ArsA subunit and the membrane subunit ArsB, which are encoded by arsA and arsB genes respectively. Arsenic efflux in bacteria is catalyzed by either ArsB alone or by ArsAB complex. The ATP-coupled pump, however, is more efficient. ArsA is composed of two homologous halves, A1 and A2, connected by a short linker sequence.
Probab=39.14 E-value=38 Score=31.07 Aligned_cols=35 Identities=29% Similarity=0.378 Sum_probs=25.6
Q ss_pred EEEeccCCchh--HHHHHHHHHhcCCcEEEeechhHH
Q 017172 203 VLLRGTVTANK--VANAVASSLCQMGIKVATICKDDY 237 (376)
Q Consensus 203 VfL~G~~~~sK--v~~AiA~~LC~rgv~V~m~s~~~~ 237 (376)
++++|..+.-| ++.++|.++.++|.||++++-|--
T Consensus 2 ~~~~g~~g~Gkt~~~~~la~~~a~~g~~~~l~~~d~~ 38 (217)
T cd02035 2 IFFTGKGGVGKTTIAAATAVRLAEEGKKVLLVSTDPA 38 (217)
T ss_pred EEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 45566554334 788999999999999999665533
No 461
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=39.11 E-value=57 Score=31.17 Aligned_cols=30 Identities=17% Similarity=0.226 Sum_probs=26.8
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEee
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI 232 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~ 232 (376)
.+.|-+.|.. .+|.+||..|++.|.+|.++
T Consensus 4 ~~~V~vIG~G---~mG~~iA~~l~~~G~~V~~~ 33 (295)
T PLN02545 4 IKKVGVVGAG---QMGSGIAQLAAAAGMDVWLL 33 (295)
T ss_pred cCEEEEECCC---HHHHHHHHHHHhcCCeEEEE
Confidence 3568889998 89999999999999999994
No 462
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=39.02 E-value=51 Score=36.04 Aligned_cols=81 Identities=15% Similarity=0.210 Sum_probs=50.2
Q ss_pred HHHHHhcCCeEEeecccccccccccc-----cceeeec-cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchh
Q 017172 140 ILEADAKGVKVISLGLLNQGEELNRN-----GEIYLER-QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANK 213 (376)
Q Consensus 140 Il~Ad~~GvKVlSLGlLNq~e~LN~~-----G~l~v~k-~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sK 213 (376)
|.-|=..|--||= |-.+.-.. ++++.+. .| +=-+.||.|+.=++..++. .++++-|++||++ .
T Consensus 270 iapALaAGNtVVl-----KPSe~tp~ta~~l~~l~~eAGlP-~GvvnvV~G~~~~~~~L~~--~~~Vd~V~FTGSt---~ 338 (604)
T PLN02419 270 FPVAVTCGNTFIL-----KPSEKDPGASVILAELAMEAGLP-DGVLNIVHGTNDTVNAICD--DEDIRAVSFVGSN---T 338 (604)
T ss_pred HHHHHHcCCEEEE-----eCCCCCcHHHHHHHHHHHHhCcC-cceEEEEeCChHHHHHHHh--CCCCCEEEEeCCh---H
Confidence 4456667777661 21111111 2344444 47 5558889886422222221 4688899999998 8
Q ss_pred HHHHHHHHHhcCCcEEEe
Q 017172 214 VANAVASSLCQMGIKVAT 231 (376)
Q Consensus 214 v~~AiA~~LC~rgv~V~m 231 (376)
+|+.|+.+..++..+|.+
T Consensus 339 vG~~I~~~Aa~~lk~v~L 356 (604)
T PLN02419 339 AGMHIYARAAAKGKRIQS 356 (604)
T ss_pred HHHHHHHHHhccCCcEEE
Confidence 999999887777888776
No 463
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=38.66 E-value=45 Score=27.38 Aligned_cols=35 Identities=31% Similarity=0.289 Sum_probs=30.2
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeechhH
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD 236 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~ 236 (376)
.-+.|++.|.. ++|..=+..|-+.|-+|.+++++.
T Consensus 6 ~~~~vlVvGgG---~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 6 KGKRVLVVGGG---PVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp TT-EEEEEEES---HHHHHHHHHHCCCTBEEEEEESSE
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCch
Confidence 34689999997 999999999999999999988664
No 464
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=38.59 E-value=73 Score=25.13 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=26.8
Q ss_pred cCCceEEEeccCCchhHHHHHHHHHhcC-CcEEEeec
Q 017172 198 KTTAHVLLRGTVTANKVANAVASSLCQM-GIKVATIC 233 (376)
Q Consensus 198 ~~t~eVfL~G~~~~sKv~~AiA~~LC~r-gv~V~m~s 233 (376)
-.-+.|.+.|.. .+|+.+|.+|++. +-+|.+.+
T Consensus 21 ~~~~~v~i~G~G---~~g~~~a~~l~~~~~~~v~v~~ 54 (86)
T cd05191 21 LKGKTVVVLGAG---EVGKGIAKLLADEGGKKVVLCD 54 (86)
T ss_pred CCCCEEEEECCC---HHHHHHHHHHHHcCCCEEEEEc
Confidence 345789999995 8999999999998 56777754
No 465
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=38.45 E-value=50 Score=30.78 Aligned_cols=33 Identities=27% Similarity=0.286 Sum_probs=29.6
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeechh
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD 235 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~ 235 (376)
-+.|++.|.. ++|..-+..|.+.|-+|++++++
T Consensus 9 gk~vlVvGgG---~va~rk~~~Ll~~ga~VtVvsp~ 41 (205)
T TIGR01470 9 GRAVLVVGGG---DVALRKARLLLKAGAQLRVIAEE 41 (205)
T ss_pred CCeEEEECcC---HHHHHHHHHHHHCCCEEEEEcCC
Confidence 3689999998 99999999999999999997765
No 466
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=38.28 E-value=38 Score=34.00 Aligned_cols=33 Identities=33% Similarity=0.500 Sum_probs=27.9
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCc-EEEeechh
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGI-KVATICKD 235 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv-~V~m~s~~ 235 (376)
.+.|++.|+. -||..||.+|.+.|+ ++.+.+.|
T Consensus 24 ~~~VlVvG~G---glGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 24 EKHVLIIGAG---ALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred CCcEEEECCC---HHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4579999998 699999999999999 67775555
No 467
>PRK07667 uridine kinase; Provisional
Probab=38.27 E-value=39 Score=30.49 Aligned_cols=38 Identities=21% Similarity=0.246 Sum_probs=29.9
Q ss_pred ceEEEeccCCchh--HHHHHHHHHhcCCcEEEeechhHHH
Q 017172 201 AHVLLRGTVTANK--VANAVASSLCQMGIKVATICKDDYE 238 (376)
Q Consensus 201 ~eVfL~G~~~~sK--v~~AiA~~LC~rgv~V~m~s~~~~~ 238 (376)
.=|.++|..++-| ++..++..|.+.|++|.+++.|+|.
T Consensus 18 ~iIgI~G~~gsGKStla~~L~~~l~~~~~~~~~i~~Dd~~ 57 (193)
T PRK07667 18 FILGIDGLSRSGKTTFVANLKENMKQEGIPFHIFHIDDYI 57 (193)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHhCCCcEEEEEcCccc
Confidence 3466777666556 8999999999999999887888764
No 468
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=38.26 E-value=57 Score=33.29 Aligned_cols=31 Identities=23% Similarity=0.295 Sum_probs=27.4
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
-+.|++.|.. ..|.++|.+|.++|.+|.++.
T Consensus 16 ~~~v~viG~G---~~G~~~A~~L~~~G~~V~~~d 46 (480)
T PRK01438 16 GLRVVVAGLG---VSGFAAADALLELGARVTVVD 46 (480)
T ss_pred CCEEEEECCC---HHHHHHHHHHHHCCCEEEEEe
Confidence 4579999987 899999999999999999843
No 469
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=38.26 E-value=58 Score=33.34 Aligned_cols=29 Identities=21% Similarity=0.251 Sum_probs=17.5
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
.+.|.+||++ .+|+.|+....++..+|++
T Consensus 178 v~~V~ftGs~---~~g~~v~~~aa~~~~~~~l 206 (434)
T cd07133 178 FDHLLFTGST---AVGRHVMRAAAENLTPVTL 206 (434)
T ss_pred CCEEEEeCch---HHHHHHHHHHHhcCceEEE
Confidence 5666667666 5666666655555455544
No 470
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=38.24 E-value=82 Score=29.31 Aligned_cols=44 Identities=16% Similarity=0.158 Sum_probs=33.4
Q ss_pred CCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEee--chhHHHHHhh
Q 017172 196 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKL 242 (376)
Q Consensus 196 IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~--s~~~~~~l~~ 242 (376)
+.+| +.|++.|+.+ -+|.+++..+.++|++|++. +.++-+.+++
T Consensus 143 ~~~~-~~vlI~g~~g--~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~ 188 (329)
T cd05288 143 PKPG-ETVVVSAAAG--AVGSVVGQIAKLLGARVVGIAGSDEKCRWLVE 188 (329)
T ss_pred CCCC-CEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 3444 6899999874 89999999999999999883 4455666655
No 471
>PLN02464 glycerol-3-phosphate dehydrogenase
Probab=37.73 E-value=36 Score=36.81 Aligned_cols=37 Identities=22% Similarity=0.370 Sum_probs=30.6
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeechhHHH
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE 238 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~~~~ 238 (376)
..-+|+..|.. =+|.++|..|.+||.+|+++.+++|-
T Consensus 70 ~~~DVvVIGGG---i~Ga~~A~~lA~rGl~V~LvE~~d~a 106 (627)
T PLN02464 70 EPLDVLVVGGG---ATGAGVALDAATRGLRVGLVEREDFS 106 (627)
T ss_pred CccCEEEECCC---HHHHHHHHHHHhCCCEEEEEeccccC
Confidence 34579999988 58999999999999999997665543
No 472
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=37.69 E-value=52 Score=33.96 Aligned_cols=53 Identities=21% Similarity=0.261 Sum_probs=34.1
Q ss_pred cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
.| .=-+.+|.|+.=++.. |=+-| +++-|.+||++ ++|+.|+....+++.+|++
T Consensus 191 lP-~gvv~~v~g~~~~~~~-L~~~~-~v~~V~fTGs~---~~g~~i~~~aa~~~~~~~l 243 (478)
T cd07085 191 LP-DGVLNVVHGGKEAVNA-LLDHP-DIKAVSFVGST---PVGEYIYERAAANGKRVQA 243 (478)
T ss_pred CC-CCcEEEEecCHHHHHH-HhcCC-CcCEEEEECCH---HHHHHHHHHHhhcCCcEEe
Confidence 36 4447888875322222 22223 58888888888 7888888776666777665
No 473
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=37.54 E-value=68 Score=28.58 Aligned_cols=42 Identities=17% Similarity=0.131 Sum_probs=32.3
Q ss_pred hhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcC-CcEEEeechh
Q 017172 189 AAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKD 235 (376)
Q Consensus 189 aAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~r-gv~V~m~s~~ 235 (376)
|.....-|+.|.. |||-+.++ ...+|.+|.++ ++.|+++|-.
T Consensus 10 A~~A~~~I~~~~~-Ifld~GtT----~~~la~~L~~~~~ltVvTnsl~ 52 (161)
T PF00455_consen 10 ARKAASLIEDGDT-IFLDSGTT----TLELAKYLPDKKNLTVVTNSLP 52 (161)
T ss_pred HHHHHHhCCCCCE-EEEECchH----HHHHHHHhhcCCceEEEECCHH
Confidence 4455777887654 88877775 79999999988 9999996533
No 474
>smart00834 CxxC_CXXC_SSSS Putative regulatory protein. CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.
Probab=37.46 E-value=12 Score=25.66 Aligned_cols=7 Identities=71% Similarity=1.511 Sum_probs=5.1
Q ss_pred CCcchhh
Q 017172 1 MPIYDYI 7 (376)
Q Consensus 1 MPlyDyi 7 (376)
||+|||-
T Consensus 1 Mp~Y~y~ 7 (41)
T smart00834 1 MPIYEYR 7 (41)
T ss_pred CCCEEEE
Confidence 7777774
No 475
>PLN02527 aspartate carbamoyltransferase
Probab=37.28 E-value=1.2e+02 Score=30.30 Aligned_cols=96 Identities=18% Similarity=0.260 Sum_probs=68.2
Q ss_pred HHhcCCeEEeecc------ccccccc-------ccccceeeeccCC---------CccEEEEcC-Cc--------ee-hh
Q 017172 143 ADAKGVKVISLGL------LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDG-SS--------LA-AA 190 (376)
Q Consensus 143 Ad~~GvKVlSLGl------LNq~e~L-------N~~G~l~v~k~P~---------~LrvrVVdG-st--------Lt-aA 190 (376)
+.+.|..++.|.. +.|+|.+ +++.-++|-|||. ...|=|+++ ++ |+ ..
T Consensus 61 ~~~LGg~~i~l~~~~~~s~~~kgEs~~Dta~vls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~g~~~HPtQ~LaDl~ 140 (306)
T PLN02527 61 MKRLGGEVLTTENAGEFSSAAKGETLEDTIRTVEGYSDIIVLRHFESGAARRAAATAEIPVINAGDGPGQHPTQALLDVY 140 (306)
T ss_pred HHHcCCCEEEeCCCCCccccCCCcCHHHHHHHHHHhCcEEEEECCChhHHHHHHHhCCCCEEECCCCCCCChHHHHHHHH
Confidence 4578999999965 4577776 8888899999982 356778887 32 22 22
Q ss_pred hhhhcCCc-CCceEEEeccCCchhHHHHHHHHHhcC-CcEEEeechhHHH
Q 017172 191 VVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDYE 238 (376)
Q Consensus 191 vVln~IP~-~t~eVfL~G~~~~sKv~~AiA~~LC~r-gv~V~m~s~~~~~ 238 (376)
.+...... .-..|-+.|...-+++++..+.+|++. |+.|.+.+.+.|+
T Consensus 141 Ti~e~~g~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P~~~~ 190 (306)
T PLN02527 141 TIQREIGRLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAPDVVK 190 (306)
T ss_pred HHHHHhCCcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECCCccC
Confidence 23333332 225889999863159999999999987 9999987777763
No 476
>cd06184 flavohem_like_fad_nad_binding FAD_NAD(P)H binding domain of flavohemoglobin. Flavohemoglobins have a globin domain containing a B-type heme fused with a ferredoxin reductase-like FAD/NAD-binding domain. Flavohemoglobins detoxify nitric oxide (NO) via an NO dioxygenase reaction. The hemoglobin domain adopts a globin fold with an embedded heme molecule. Flavohemoglobins also have a C-terminal reductase domain with bindiing sites for FAD and NAD(P)H. This domain catalyzes the conversion of NO + O2 + NAD(P)H to NO3- + NAD(P)+. Instead of the oxygen transport function of hemoglobins, flavohemoglobins seem to act in NO dioxygenation and NO signalling.
Probab=37.25 E-value=63 Score=29.61 Aligned_cols=39 Identities=26% Similarity=0.333 Sum_probs=30.3
Q ss_pred eehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcE
Q 017172 187 LAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK 228 (376)
Q Consensus 187 LtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~ 228 (376)
+..+.+.+.+|....+|+++|.. .+.+++..+|-++|++
T Consensus 196 ~~~~~l~~~~~~~~~~v~icGp~---~m~~~v~~~l~~~G~~ 234 (247)
T cd06184 196 IDLALLRELLLPADADFYLCGPV---PFMQAVREGLKALGVP 234 (247)
T ss_pred cCHHHHhhccCCCCCEEEEECCH---HHHHHHHHHHHHcCCC
Confidence 34455555466667899999999 6789999999999985
No 477
>TIGR03364 HpnW_proposed FAD dependent oxidoreductase TIGR03364. This clade of FAD dependent oxidoreductases (members of the pfam01266 family) is syntenically associated with a family of proposed phosphonatase-like enzymes (TIGR03351) and is also found (less frequently) in association with phosphonate transporter components. A likely role for this enzyme involves the oxidative deamination of an aminophosphonate differring slightly from 2-aminoethylphosphonate, possibly 1-hydroxy-2-aminoethylphosphonate (see the comments for TIGR03351). Many members of the larger FAD dependent oxidoreductase family act as amino acid oxidative deaminases.
Probab=37.25 E-value=40 Score=32.44 Aligned_cols=31 Identities=19% Similarity=0.278 Sum_probs=26.0
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeechh
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATICKD 235 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~ 235 (376)
+|...|+- =+|.++|..|.++|.+|+++.++
T Consensus 2 dv~IIG~G---i~G~s~A~~L~~~G~~V~vle~~ 32 (365)
T TIGR03364 2 DLIIVGAG---ILGLAHAYAAARRGLSVTVIERS 32 (365)
T ss_pred CEEEECCC---HHHHHHHHHHHHCCCeEEEEeCC
Confidence 47788887 68999999999999999986543
No 478
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=37.24 E-value=60 Score=33.01 Aligned_cols=19 Identities=11% Similarity=-0.020 Sum_probs=9.2
Q ss_pred hHHHHHHHHHhcCCcEEEe
Q 017172 213 KVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 213 Kv~~AiA~~LC~rgv~V~m 231 (376)
+.+..|+...+..+=|+++
T Consensus 221 ~aa~~i~~~~~~~~GQ~C~ 239 (429)
T cd07100 221 KAVKTAVKGRLQNAGQSCI 239 (429)
T ss_pred HHHHHHHHHHHhccCCCCC
Confidence 4445555544444444444
No 479
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=37.10 E-value=64 Score=33.39 Aligned_cols=30 Identities=20% Similarity=0.199 Sum_probs=17.9
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+++-|++||++ ++|++|+....++..+|++
T Consensus 204 ~v~~V~fTGs~---~~G~~i~~~aa~~l~~~~l 233 (462)
T PRK13968 204 RIAAVTVTGSV---RAGAAIGAQAGAALKKCVL 233 (462)
T ss_pred CCCEEEEECCH---HHHHHHHHHHhhcCCcEEE
Confidence 46666777766 6666666655555444443
No 480
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=37.09 E-value=39 Score=33.90 Aligned_cols=33 Identities=33% Similarity=0.475 Sum_probs=27.2
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCc-EEEeechh
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGI-KVATICKD 235 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv-~V~m~s~~ 235 (376)
-+.|++.|.. -+|..+|.+|++.|+ ++.+++.|
T Consensus 24 ~~~VlIiG~G---glGs~va~~La~aGvg~i~lvD~D 57 (338)
T PRK12475 24 EKHVLIVGAG---ALGAANAEALVRAGIGKLTIADRD 57 (338)
T ss_pred CCcEEEECCC---HHHHHHHHHHHHcCCCEEEEEcCC
Confidence 3579999998 699999999999999 56655554
No 481
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=37.07 E-value=69 Score=33.13 Aligned_cols=30 Identities=10% Similarity=0.124 Sum_probs=19.8
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
+.+.|++||++ .+|++|+....++..+|++
T Consensus 219 ~vd~v~fTGS~---~~G~~i~~~aa~~~~~~~l 248 (481)
T TIGR03216 219 GVDAITFTGET---RTGSAIMKAAADGVKPVSF 248 (481)
T ss_pred CCCEEEEECCH---HHHHHHHHHHhcCCCeEEE
Confidence 66677777766 6777777666665555554
No 482
>PRK00711 D-amino acid dehydrogenase small subunit; Validated
Probab=37.02 E-value=45 Score=32.67 Aligned_cols=31 Identities=26% Similarity=0.294 Sum_probs=27.4
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeechh
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATICKD 235 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~ 235 (376)
+|...|+. =+|.++|..|.++|.+|+++.++
T Consensus 2 ~v~IVG~G---i~Gls~A~~l~~~g~~V~vle~~ 32 (416)
T PRK00711 2 RVVVLGSG---VIGVTSAWYLAQAGHEVTVIDRQ 32 (416)
T ss_pred EEEEECCc---HHHHHHHHHHHHCCCEEEEEeCC
Confidence 57888988 79999999999999999997654
No 483
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=36.98 E-value=63 Score=33.60 Aligned_cols=53 Identities=11% Similarity=0.126 Sum_probs=32.2
Q ss_pred cCCCccEEEEcCCcee-hhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLA-AAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLt-aAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
-| .=-+.+|.|+.-. ...++. .++.+-|++||++ ++|+.|+.+..++..+|.+
T Consensus 191 lP-~gv~~~v~g~~~~~~~~L~~--~~~v~~V~fTGS~---~~G~~i~~~aa~~~~~~~l 244 (472)
T TIGR03374 191 FP-AGVVNILFGRGKTVGDPLTG--HEKVRMVSLTGSI---ATGEHILSHTAPSIKRTHM 244 (472)
T ss_pred CC-cCeEEEEecCchhHHHHHhc--CCCcCEEEEECCH---HHHHHHHHHHhhcccceEE
Confidence 45 3447777774322 222221 3467788888887 7888888776666555554
No 484
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=36.94 E-value=58 Score=33.10 Aligned_cols=23 Identities=17% Similarity=0.250 Sum_probs=13.0
Q ss_pred eccCCCccEEEEcCCceehhhhhh
Q 017172 171 ERQPNKLKIKVVDGSSLAAAVVVN 194 (376)
Q Consensus 171 ~k~P~~LrvrVVdGstLtaAvVln 194 (376)
.+|| +++.=...||+=+.-.|.+
T Consensus 185 ~~~~-~v~~V~fTGs~~~g~~i~~ 207 (443)
T cd07152 185 VEDP-NVAMISFTGSTAVGRKVGE 207 (443)
T ss_pred hcCC-CCCEEEEECCHHHHHHHHH
Confidence 5566 5555556666665554444
No 485
>PRK07236 hypothetical protein; Provisional
Probab=36.84 E-value=51 Score=32.34 Aligned_cols=33 Identities=15% Similarity=0.072 Sum_probs=28.1
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
...+|...|+. =.|-+.|.+|.++|++|+++.+
T Consensus 5 ~~~~ViIVGaG---~aGl~~A~~L~~~G~~v~v~E~ 37 (386)
T PRK07236 5 SGPRAVVIGGS---LGGLFAALLLRRAGWDVDVFER 37 (386)
T ss_pred CCCeEEEECCC---HHHHHHHHHHHhCCCCEEEEec
Confidence 34689999998 6799999999999999999543
No 486
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=36.78 E-value=61 Score=34.55 Aligned_cols=54 Identities=17% Similarity=0.146 Sum_probs=36.9
Q ss_pred cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhc-CCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQ-MGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~-rgv~V~m 231 (376)
-| +=-+.+|.|..=.+...|-+ .++.+-|++||.+ .+|+.|+.+..+ ...+|++
T Consensus 250 lP-~gvv~vv~g~~~~~~~~L~~-~~~vd~V~FTGS~---~~G~~v~~~aa~~~l~pv~l 304 (538)
T PLN02466 250 LP-PGVLNVVSGFGPTAGAALAS-HMDVDKLAFTGST---DTGKIVLELAAKSNLKPVTL 304 (538)
T ss_pred CC-cccEEEEecCchhHHHHHhc-CCCcCEEEEECCH---HHHHHHHHHHHhcCCCcEEE
Confidence 46 66688998854322222322 2358889999999 899999988775 5567755
No 487
>PRK06185 hypothetical protein; Provisional
Probab=36.71 E-value=40 Score=33.01 Aligned_cols=32 Identities=16% Similarity=0.216 Sum_probs=28.0
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeechh
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICKD 235 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~ 235 (376)
.+|+..|+. -+|-+.|.+|.++|++|+++.+.
T Consensus 7 ~dV~IvGgG---~~Gl~~A~~La~~G~~v~liE~~ 38 (407)
T PRK06185 7 TDCCIVGGG---PAGMMLGLLLARAGVDVTVLEKH 38 (407)
T ss_pred ccEEEECCC---HHHHHHHHHHHhCCCcEEEEecC
Confidence 578999998 78999999999999999996543
No 488
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=36.58 E-value=66 Score=33.05 Aligned_cols=53 Identities=21% Similarity=0.196 Sum_probs=35.0
Q ss_pred cCCCccEEEEcCCcee-hhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLA-AAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLt-aAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
-| .=-+.+|.|..-. ...+++ .++.+.|++||.+ .+|+.|+.+..+...+|.+
T Consensus 186 ~P-~gvv~~v~g~~~~~~~~l~~--~~~v~~v~fTGs~---~~g~~i~~~aa~~~~~~~l 239 (465)
T cd07151 186 LP-KGVLNVVVGAGSEIGDAFVE--HPVPRLISFTGST---PVGRHIGELAGRHLKKVAL 239 (465)
T ss_pred cC-ccceEEEecCchhhHHHHhc--CCCCCEEEEECCH---HHHHHHHHHHHhcCCcEEE
Confidence 36 5567788875322 222332 2458889999988 8899998887766666554
No 489
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=36.47 E-value=51 Score=31.10 Aligned_cols=32 Identities=25% Similarity=0.276 Sum_probs=27.4
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEeec
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 233 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s 233 (376)
.-+.|.+.|-. +||+.+|..|.++|.+|+..+
T Consensus 22 ~g~~vaIqGfG---nVG~~~a~~L~~~G~~vV~vs 53 (217)
T cd05211 22 EGLTVAVQGLG---NVGWGLAKKLAEEGGKVLAVS 53 (217)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHHcCCEEEEEE
Confidence 44689999977 999999999999999887744
No 490
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=36.21 E-value=78 Score=29.22 Aligned_cols=41 Identities=22% Similarity=0.317 Sum_probs=30.3
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEe--echhHHHHHh
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 241 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m--~s~~~~~~l~ 241 (376)
+...|++.|+++ =+|.+++..+..+|++|.+ .+.++.+.++
T Consensus 146 ~~~~vlI~g~~g--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 188 (325)
T cd05280 146 EDGPVLVTGATG--GVGSIAVAILAKLGYTVVALTGKEEQADYLK 188 (325)
T ss_pred CCCEEEEECCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 345799999975 6999998888888999877 3444555553
No 491
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=36.21 E-value=65 Score=34.20 Aligned_cols=104 Identities=23% Similarity=0.182 Sum_probs=63.7
Q ss_pred EEeeccCceecc-chhhhHHHHHHHHHHHHHHhcCCeEEeeccccccccccccc----ceeeec--cCCCccEEEEcCCc
Q 017172 114 WVVPRYIVQYNL-PWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNG----EIYLER--QPNKLKIKVVDGSS 186 (376)
Q Consensus 114 WviPRy~fqY~l-~~~~~~IN~lIE~AIl~Ad~~GvKVlSLGlLNq~e~LN~~G----~l~v~k--~P~~LrvrVVdGst 186 (376)
.-.|..|+=..+ ||-. .++-.+ ..|.-|=..|--|+==- .+.--.-+ +++.+. .| .=-+-+|.|+.
T Consensus 144 ~~~P~~GVv~~I~pwN~-P~~~~~-~~~~~ALaaGN~VV~KP----s~~tp~~~~~l~~~~~~ag~lP-~gv~~~v~g~~ 216 (521)
T PRK11903 144 VLVPTRGVALFINAFNF-PAWGLW-EKAAPALLAGVPVIVKP----ATATAWLTQRMVKDVVAAGILP-AGALSVVCGSS 216 (521)
T ss_pred EEecCcceEEEECCcch-HHHHHH-HHHHHHHHcCCeEEEEc----CCcChHHHHHHHHHHHHhCCCC-cCceEEeeCCc
Confidence 346766775554 5443 444444 55667888888887322 22111122 233333 47 45589998854
Q ss_pred eehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHH--hcCCcEEEe
Q 017172 187 LAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSL--CQMGIKVAT 231 (376)
Q Consensus 187 LtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~L--C~rgv~V~m 231 (376)
..+.+.+ ++.+-|++||++ .+|+.|+.+- .+++.+|.+
T Consensus 217 ---~~~~~~l-~~v~~v~fTGS~---~~G~~v~~~aa~~~~~~~~~l 256 (521)
T PRK11903 217 ---AGLLDHL-QPFDVVSFTGSA---ETAAVLRSHPAVVQRSVRVNV 256 (521)
T ss_pred ---hHHHhcc-cCCCEEEEECCH---HHHHHHHhhhhhhccCceeEe
Confidence 2245555 578899999998 8999999852 366777655
No 492
>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional
Probab=36.13 E-value=43 Score=32.56 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=27.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhcCCcEEEeechh
Q 017172 201 AHVLLRGTVTANKVANAVASSLCQMGIKVATICKD 235 (376)
Q Consensus 201 ~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~ 235 (376)
.+|+..|+. =+|-+.|.+|.++|++|+++.++
T Consensus 8 ~dViIVGaG---~~Gl~~A~~L~~~G~~v~liE~~ 39 (388)
T PRK07494 8 TDIAVIGGG---PAGLAAAIALARAGASVALVAPE 39 (388)
T ss_pred CCEEEECcC---HHHHHHHHHHhcCCCeEEEEeCC
Confidence 369999998 68999999999999999995443
No 493
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=36.11 E-value=48 Score=32.42 Aligned_cols=32 Identities=16% Similarity=0.309 Sum_probs=27.9
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCCcEEEeech
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 234 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~ 234 (376)
-+.|.+.|.. .+|+++|..|...|.+|.+.++
T Consensus 151 gk~v~IiG~G---~iG~avA~~L~~~G~~V~v~~R 182 (287)
T TIGR02853 151 GSNVMVLGFG---RTGMTIARTFSALGARVFVGAR 182 (287)
T ss_pred CCEEEEEcCh---HHHHHHHHHHHHCCCEEEEEeC
Confidence 3689999997 7999999999999999998443
No 494
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=35.93 E-value=68 Score=33.48 Aligned_cols=53 Identities=8% Similarity=0.188 Sum_probs=37.1
Q ss_pred cCCCccEEEEcCCce-ehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCC------cEEEe
Q 017172 173 QPNKLKIKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMG------IKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstL-taAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rg------v~V~m 231 (376)
-| .=-+.+|+|..- +.+.++. .++++-|++||++ ++|++|+..+.++- .+|++
T Consensus 209 lP-~gvv~~v~g~~~~~~~~L~~--~~~v~~v~ftGs~---~~g~~v~~~aa~~~~~~~~~~~v~l 268 (500)
T cd07083 209 FP-PGVVQFLPGVGEEVGAYLTE--HERIRGINFTGSL---ETGKKIYEAAARLAPGQTWFKRLYV 268 (500)
T ss_pred CC-CCceEEEeCCCchhHHHHhc--CCCcCEEEEECcH---HHHHHHHHHHhhccccccccCcEEE
Confidence 47 445889988532 3333332 5678899999999 89999999877653 66654
No 495
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=35.92 E-value=65 Score=33.06 Aligned_cols=53 Identities=15% Similarity=0.148 Sum_probs=30.4
Q ss_pred cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcCCcEEEe
Q 017172 173 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m 231 (376)
.| +=-+.+|+|+.-+...++. .++.+-|++||.+ .+|+.|+....++..+|.+
T Consensus 192 lP-~gv~~~v~g~~~~~~~l~~--~~~i~~v~ftGs~---~~g~~v~~~~~~~~~~~~l 244 (471)
T cd07139 192 LP-PGVVNVVPADREVGEYLVR--HPGVDKVSFTGST---AAGRRIAAVCGERLARVTL 244 (471)
T ss_pred CC-CCcEEEEeCCHHHHHHHhc--CCCCCEEEEECcH---HHHHHHHHHHHhcCCEEEE
Confidence 45 4446777764322222221 3356777788877 6777777766665555544
No 496
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=35.74 E-value=58 Score=37.38 Aligned_cols=30 Identities=20% Similarity=0.222 Sum_probs=26.2
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCC----cEEEe
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMG----IKVAT 231 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rg----v~V~m 231 (376)
.+.||+||+++ =+|..++..|.++| ++|..
T Consensus 971 ~~~VlvTGatG--flG~~l~~~Ll~~~~~~~~~V~~ 1004 (1389)
T TIGR03443 971 PITVFLTGATG--FLGSFILRDLLTRRSNSNFKVFA 1004 (1389)
T ss_pred CceEEEeCCcc--ccHHHHHHHHHhcCCCCCcEEEE
Confidence 46899999997 89999999999877 78877
No 497
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=35.38 E-value=55 Score=35.17 Aligned_cols=41 Identities=7% Similarity=0.142 Sum_probs=33.3
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhcCCcEEEe--echhHHHHHhh
Q 017172 199 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 242 (376)
Q Consensus 199 ~t~eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m--~s~~~~~~l~~ 242 (376)
...+|.+.|.. .+|+.+|..|-++|++|++ .++++-+.+++
T Consensus 399 ~~~~vII~G~G---r~G~~va~~L~~~g~~vvvID~d~~~v~~~~~ 441 (601)
T PRK03659 399 DKPQVIIVGFG---RFGQVIGRLLMANKMRITVLERDISAVNLMRK 441 (601)
T ss_pred ccCCEEEecCc---hHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh
Confidence 34689999988 9999999999999999999 44555665554
No 498
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=35.37 E-value=58 Score=33.78 Aligned_cols=53 Identities=11% Similarity=0.175 Sum_probs=34.9
Q ss_pred cCCCccEEEEcCCceehhhhhhcCCcCCceEEEeccCCchhHHHHHHHHHhcC-CcEEEe
Q 017172 173 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT 231 (376)
Q Consensus 173 ~P~~LrvrVVdGstLtaAvVln~IP~~t~eVfL~G~~~~sKv~~AiA~~LC~r-gv~V~m 231 (376)
-| +=-+.+|.|+.-++..++. .++.+-|.+||++ ++|+.|+.+.+++ ..+|.+
T Consensus 187 lP-~gvv~~v~g~~~~~~~L~~--~~~vd~V~fTGS~---~~G~~i~~~aa~~~~~~~~l 240 (484)
T TIGR03240 187 LP-AGVLNLVQGARETGVALAA--HPDIDGLLFTGSS---NTGHLLHRQFAGRPEKILAL 240 (484)
T ss_pred cC-cccEEEEeCCHHHHHHHhc--CCCCCEEEEECCH---HHHHHHHHHhhhcCCCcEEE
Confidence 47 6667888885333332222 3378889999998 8999999877765 344443
No 499
>TIGR01988 Ubi-OHases Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family. This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4, ) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) maki
Probab=35.26 E-value=43 Score=32.02 Aligned_cols=31 Identities=29% Similarity=0.382 Sum_probs=25.5
Q ss_pred eEEEeccCCchhHHHHHHHHHhcCCcEEEeechh
Q 017172 202 HVLLRGTVTANKVANAVASSLCQMGIKVATICKD 235 (376)
Q Consensus 202 eVfL~G~~~~sKv~~AiA~~LC~rgv~V~m~s~~ 235 (376)
+|...|+. =.|-+.|.+|.|+|++|+++.+.
T Consensus 1 dViIvGaG---~aGl~~A~~L~~~G~~v~v~Er~ 31 (385)
T TIGR01988 1 DIVIVGGG---MVGLALALALARSGLKIALIEAT 31 (385)
T ss_pred CEEEECCC---HHHHHHHHHHhcCCCEEEEEeCC
Confidence 37788887 56999999999999999995444
No 500
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=35.24 E-value=72 Score=29.99 Aligned_cols=40 Identities=10% Similarity=0.113 Sum_probs=30.7
Q ss_pred CceEEEeccCCchhHHHHHHHHHhcCC-cEEEe--echhHHHHHhh
Q 017172 200 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKL 242 (376)
Q Consensus 200 t~eVfL~G~~~~sKv~~AiA~~LC~rg-v~V~m--~s~~~~~~l~~ 242 (376)
-+.|++.|+. + +|.+++..+.++| ++|.+ .++++.+.+++
T Consensus 168 ~~~vlI~g~~--~-vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~ 210 (340)
T cd05284 168 GSTVVVIGVG--G-LGHIAVQILRALTPATVIAVDRSEEALKLAER 210 (340)
T ss_pred CCEEEEEcCc--H-HHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHH
Confidence 4679999954 5 9999999888888 89877 35667776643
Done!