Query 017173
Match_columns 376
No_of_seqs 160 out of 1947
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 10:07:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017173.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017173hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 99.3 2.8E-10 9.6E-15 103.5 22.9 241 80-350 12-279 (306)
2 2xn4_A Kelch-like protein 2; s 99.3 1.3E-09 4.5E-14 98.9 27.3 232 91-350 31-283 (302)
3 2woz_A Kelch repeat and BTB do 99.3 3.6E-09 1.2E-13 96.8 29.0 232 90-349 24-293 (318)
4 4asc_A Kelch repeat and BTB do 99.3 7.3E-10 2.5E-14 101.3 24.2 231 90-350 13-284 (315)
5 2vpj_A Kelch-like protein 12; 99.3 1E-09 3.5E-14 99.5 24.4 230 91-350 32-285 (301)
6 1zgk_A Kelch-like ECH-associat 99.3 1.1E-09 3.7E-14 99.9 22.7 230 90-349 39-293 (308)
7 3ii7_A Kelch-like protein 7; p 99.1 1.8E-08 6.2E-13 91.5 20.3 226 54-299 24-282 (306)
8 1zgk_A Kelch-like ECH-associat 99.0 1.7E-08 5.7E-13 91.9 19.4 228 53-300 38-298 (308)
9 2uvk_A YJHT; unknown function, 99.0 1.1E-07 3.8E-12 88.2 22.7 232 90-348 31-347 (357)
10 2vpj_A Kelch-like protein 12; 99.0 3.4E-08 1.2E-12 89.4 18.1 227 54-300 31-289 (301)
11 2woz_A Kelch repeat and BTB do 98.9 3.7E-08 1.3E-12 90.0 17.8 184 92-295 80-293 (318)
12 2xn4_A Kelch-like protein 2; s 98.9 5.6E-08 1.9E-12 88.0 18.9 189 91-299 78-287 (302)
13 1fs1_A SKP2 F-BOX, cyclin A/CD 98.9 1.6E-10 5.5E-15 76.0 1.0 42 33-74 6-47 (53)
14 4asc_A Kelch repeat and BTB do 98.9 5.7E-08 2E-12 88.6 17.9 185 92-296 69-284 (315)
15 2uvk_A YJHT; unknown function, 98.7 1.2E-06 4.1E-11 81.2 20.7 207 117-349 16-300 (357)
16 2e31_A FBS1, F-box only protei 98.6 3.7E-09 1.3E-13 94.4 0.0 48 28-75 43-91 (297)
17 2zwa_A Leucine carboxyl methyl 98.4 8E-06 2.7E-10 82.7 17.0 189 91-295 413-641 (695)
18 2zwa_A Leucine carboxyl methyl 98.4 1.2E-05 4.1E-10 81.4 17.8 206 119-348 396-640 (695)
19 2ovr_B FBW7, F-BOX/WD repeat p 98.3 0.00022 7.5E-09 67.6 24.0 187 34-236 17-230 (445)
20 1k3i_A Galactose oxidase precu 98.3 5.6E-06 1.9E-10 83.3 12.3 238 91-350 220-504 (656)
21 3v7d_B Cell division control p 98.2 0.0012 4.2E-08 62.6 25.9 38 35-72 14-51 (464)
22 1p22_A F-BOX/WD-repeat protein 98.1 0.00091 3.1E-08 63.2 24.5 37 36-72 11-51 (435)
23 1k3i_A Galactose oxidase precu 98.0 8E-05 2.8E-09 74.8 14.7 137 92-240 168-329 (656)
24 2ast_B S-phase kinase-associat 97.6 1.4E-05 4.7E-10 73.2 0.8 42 32-73 5-46 (336)
25 3l2o_B F-box only protein 4; s 97.5 7.4E-06 2.5E-10 72.4 -1.9 41 34-74 3-43 (312)
26 2p1m_B Transport inhibitor res 97.2 5E-05 1.7E-09 75.1 -0.1 39 31-69 1-40 (594)
27 3ogk_B Coronatine-insensitive 95.4 0.0021 7E-08 63.4 -0.7 34 37-70 14-48 (592)
28 3dsm_A Uncharacterized protein 95.2 1.6 5.6E-05 38.9 22.7 221 90-347 17-257 (328)
29 1l0q_A Surface layer protein; 93.9 3.5 0.00012 37.2 27.2 143 81-237 3-150 (391)
30 3dsm_A Uncharacterized protein 93.9 3.3 0.00011 36.9 20.3 131 90-237 64-215 (328)
31 2hqs_A Protein TOLB; TOLB, PAL 92.1 7.3 0.00025 35.9 24.9 200 118-350 187-394 (415)
32 3u4y_A Uncharacterized protein 89.8 9.5 0.00032 33.2 23.7 231 80-346 10-255 (331)
33 3u4y_A Uncharacterized protein 89.5 10 0.00034 33.1 21.6 237 90-349 62-310 (331)
34 3vgz_A Uncharacterized protein 87.6 14 0.00047 32.4 27.4 221 91-347 70-307 (353)
35 3q7m_A Lipoprotein YFGL, BAMB; 86.5 18 0.0006 32.4 24.2 210 91-346 114-340 (376)
36 1ri6_A Putative isomerase YBHE 83.9 20 0.0007 30.9 21.8 164 117-298 136-319 (343)
37 1l0q_A Surface layer protein; 83.9 23 0.00079 31.5 28.9 230 78-346 42-278 (391)
38 1n7d_A LDL receptor, low-densi 83.9 37 0.0013 33.9 16.5 107 215-345 507-616 (699)
39 3q7m_A Lipoprotein YFGL, BAMB; 83.7 24 0.00081 31.5 25.1 132 90-236 63-209 (376)
40 3scy_A Hypothetical bacterial 82.5 25 0.00086 31.0 18.8 163 115-295 160-345 (361)
41 2ojh_A Uncharacterized protein 80.7 24 0.00081 29.5 19.3 143 131-299 22-172 (297)
42 1nir_A Nitrite reductase; hemo 79.2 46 0.0016 31.9 19.2 113 215-345 334-460 (543)
43 2p4o_A Hypothetical protein; p 77.9 26 0.0009 30.4 11.8 78 210-300 36-115 (306)
44 3v65_B Low-density lipoprotein 77.5 42 0.0014 30.5 20.6 103 120-237 87-193 (386)
45 2aq5_A Coronin-1A; WD40 repeat 77.5 40 0.0014 30.2 23.1 151 118-289 140-301 (402)
46 2ojh_A Uncharacterized protein 76.9 31 0.0011 28.7 23.5 183 91-296 23-213 (297)
47 1kv9_A Type II quinohemoprotei 76.8 49 0.0017 32.6 14.6 123 209-345 60-189 (668)
48 1kb0_A Quinohemoprotein alcoho 76.3 57 0.0019 32.3 14.9 122 209-345 71-201 (677)
49 3hfq_A Uncharacterized protein 75.6 41 0.0014 29.4 21.6 226 95-342 23-270 (347)
50 3azo_A Aminopeptidase; POP fam 75.4 61 0.0021 31.4 21.6 152 131-296 161-332 (662)
51 2z2n_A Virginiamycin B lyase; 74.8 37 0.0013 28.5 17.9 131 91-236 163-297 (299)
52 3lrv_A PRE-mRNA-splicing facto 73.3 47 0.0016 29.0 18.2 158 120-294 138-299 (343)
53 1rwi_B Serine/threonine-protei 73.0 39 0.0014 28.0 23.3 108 115-236 72-182 (270)
54 3bws_A Protein LP49; two-domai 72.9 53 0.0018 29.5 23.2 134 90-236 144-294 (433)
55 1yiq_A Quinohemoprotein alcoho 72.8 76 0.0026 31.4 14.8 124 209-345 64-194 (689)
56 3g4e_A Regucalcin; six bladed 72.7 45 0.0015 28.6 19.5 102 120-234 24-139 (297)
57 4aez_A CDC20, WD repeat-contai 72.5 54 0.0018 29.4 21.2 102 120-235 103-206 (401)
58 3hfq_A Uncharacterized protein 71.5 51 0.0017 28.7 19.9 165 116-296 147-326 (347)
59 3amr_A 3-phytase; beta-propell 70.8 61 0.0021 29.3 18.0 145 82-234 42-210 (355)
60 2ad6_A Methanol dehydrogenase 69.5 83 0.0028 30.3 15.0 122 209-345 56-187 (571)
61 3tc9_A Hypothetical hydrolase; 69.2 71 0.0024 29.4 16.8 106 119-237 148-260 (430)
62 3sjl_D Methylamine dehydrogena 68.3 72 0.0025 29.2 21.3 115 215-347 237-367 (386)
63 2vdu_B TRNA (guanine-N(7)-)-me 67.3 75 0.0026 29.0 24.9 213 76-298 111-351 (450)
64 3v9f_A Two-component system se 64.6 1.2E+02 0.004 30.3 14.6 136 92-240 471-617 (781)
65 3jrp_A Fusion protein of prote 64.3 72 0.0025 27.7 18.3 53 181-236 80-136 (379)
66 3bws_A Protein LP49; two-domai 64.3 81 0.0028 28.3 28.2 222 90-343 191-432 (433)
67 3hrp_A Uncharacterized protein 64.1 86 0.003 28.6 23.4 113 118-239 139-254 (409)
68 3no2_A Uncharacterized protein 62.9 72 0.0024 27.2 18.0 103 118-235 2-109 (276)
69 3jro_A Fusion protein of prote 62.0 1.3E+02 0.0044 29.9 16.9 52 181-235 78-133 (753)
70 3g4e_A Regucalcin; six bladed 61.4 77 0.0026 27.1 18.5 95 181-289 36-139 (297)
71 3m0c_C LDL receptor, low-densi 61.1 1.4E+02 0.0049 30.1 27.3 112 208-344 516-633 (791)
72 1q7f_A NHL, brain tumor CG1071 60.7 74 0.0025 26.7 21.4 174 91-287 101-280 (286)
73 1ri6_A Putative isomerase YBHE 59.8 82 0.0028 26.9 25.3 244 79-349 49-316 (343)
74 2fp8_A Strictosidine synthase; 57.0 96 0.0033 26.8 12.4 117 209-343 83-216 (322)
75 3v9f_A Two-component system se 56.0 1.7E+02 0.0057 29.2 21.0 136 92-240 429-574 (781)
76 1npe_A Nidogen, entactin; glyc 55.7 89 0.003 26.0 24.8 209 119-370 46-262 (267)
77 3scy_A Hypothetical bacterial 55.0 1.1E+02 0.0037 26.7 24.1 124 210-350 215-346 (361)
78 3mbr_X Glutamine cyclotransfer 54.4 99 0.0034 26.2 16.3 134 91-237 44-182 (243)
79 2hqs_A Protein TOLB; TOLB, PAL 54.1 1.3E+02 0.0043 27.3 25.6 189 91-302 204-400 (415)
80 3ei3_B DNA damage-binding prot 53.5 1.2E+02 0.004 26.7 20.6 103 122-235 88-195 (383)
81 2dg1_A DRP35, lactonase; beta 53.5 1.1E+02 0.0037 26.3 15.7 102 181-295 67-177 (333)
82 3nol_A Glutamine cyclotransfer 53.4 1.1E+02 0.0037 26.3 15.4 134 91-237 66-204 (262)
83 1ijq_A LDL receptor, low-densi 53.4 1.1E+02 0.0038 26.5 20.6 101 122-237 3-111 (316)
84 1k8k_C P40, ARP2/3 complex 41 52.8 1.1E+02 0.0039 26.3 21.3 80 208-300 205-287 (372)
85 4gga_A P55CDC, cell division c 52.6 1.3E+02 0.0045 27.0 19.5 103 118-236 114-220 (420)
86 3v7d_B Cell division control p 52.0 1.4E+02 0.0047 27.1 23.7 172 90-287 290-463 (464)
87 3vl1_A 26S proteasome regulato 51.4 1.3E+02 0.0045 26.6 12.1 109 118-234 256-365 (420)
88 3dwl_C Actin-related protein 2 51.4 1.2E+02 0.0042 26.3 13.7 108 118-236 20-133 (377)
89 4a0p_A LRP6, LRP-6, low-densit 51.2 1.8E+02 0.0063 28.3 23.8 107 120-239 6-116 (628)
90 3nok_A Glutaminyl cyclase; bet 50.5 1.2E+02 0.0042 26.0 16.4 134 91-237 76-213 (268)
91 3pe7_A Oligogalacturonate lyas 49.7 1.3E+02 0.0046 26.2 18.6 202 91-293 169-388 (388)
92 1yfq_A Cell cycle arrest prote 49.3 1.2E+02 0.0042 25.7 24.4 131 90-234 33-179 (342)
93 3mmy_A MRNA export factor; mRN 49.1 1.3E+02 0.0043 25.8 22.1 139 86-236 60-201 (368)
94 3v64_C Agrin; beta propeller, 48.9 1.4E+02 0.0049 26.3 22.7 104 120-238 44-151 (349)
95 3i2n_A WD repeat-containing pr 47.8 1.3E+02 0.0045 25.7 15.7 106 119-235 178-292 (357)
96 3v65_B Low-density lipoprotein 47.5 1.6E+02 0.0054 26.5 26.4 166 57-238 62-238 (386)
97 4a2l_A BT_4663, two-component 46.1 2.4E+02 0.0081 28.1 14.5 134 92-240 473-620 (795)
98 1rwi_B Serine/threonine-protei 45.5 1.3E+02 0.0043 24.7 18.5 134 90-236 87-224 (270)
99 1ijq_A LDL receptor, low-densi 45.3 1.5E+02 0.0052 25.6 25.9 142 80-237 2-155 (316)
100 2be1_A Serine/threonine-protei 45.0 29 0.00098 31.2 5.3 22 214-235 9-30 (339)
101 2aq5_A Coronin-1A; WD40 repeat 44.9 1.7E+02 0.0057 26.0 19.7 109 120-236 93-209 (402)
102 2z2n_A Virginiamycin B lyase; 43.9 1.4E+02 0.0047 24.8 22.0 134 91-240 121-260 (299)
103 1jof_A Carboxy-CIS,CIS-muconat 43.6 1.7E+02 0.0057 25.7 10.5 70 215-292 155-229 (365)
104 1qks_A Cytochrome CD1 nitrite 43.4 2.3E+02 0.0078 27.2 19.2 25 120-144 255-279 (567)
105 1pgu_A Actin interacting prote 42.3 2.2E+02 0.0075 26.6 15.7 145 82-235 458-615 (615)
106 1flg_A Protein (quinoprotein e 41.9 2.4E+02 0.0083 27.1 14.5 31 209-239 62-94 (582)
107 2iwa_A Glutamine cyclotransfer 41.2 1.7E+02 0.0058 25.0 16.6 135 90-237 44-184 (266)
108 3sre_A PON1, serum paraoxonase 40.0 1.2E+02 0.0042 27.2 8.8 83 215-301 60-162 (355)
109 3m0c_C LDL receptor, low-densi 39.9 3.1E+02 0.011 27.7 21.4 26 215-240 482-508 (791)
110 2dg1_A DRP35, lactonase; beta 39.1 1.8E+02 0.0062 24.8 22.2 114 118-238 53-175 (333)
111 2xdw_A Prolyl endopeptidase; a 38.9 2.8E+02 0.0097 27.0 20.0 37 262-298 292-332 (710)
112 2bkl_A Prolyl endopeptidase; m 37.9 2.9E+02 0.01 26.8 28.3 138 132-290 203-352 (695)
113 3o4h_A Acylamino-acid-releasin 37.1 2.7E+02 0.0092 26.2 17.6 183 82-295 124-320 (582)
114 1nir_A Nitrite reductase; hemo 36.7 2.8E+02 0.0095 26.2 19.9 104 118-236 146-259 (543)
115 2be1_A Serine/threonine-protei 36.6 69 0.0024 28.7 6.5 23 214-236 110-132 (339)
116 2z3z_A Dipeptidyl aminopeptida 36.0 3.1E+02 0.01 26.5 27.3 56 90-147 101-162 (706)
117 1w6s_A Methanol dehydrogenase 35.7 3.1E+02 0.011 26.5 14.8 31 209-239 56-90 (599)
118 3c5m_A Oligogalacturonate lyas 35.5 2.2E+02 0.0075 24.7 21.8 153 131-295 216-390 (396)
119 3sov_A LRP-6, low-density lipo 34.9 2.3E+02 0.0077 24.7 22.6 144 78-236 3-156 (318)
120 2qc5_A Streptogramin B lactona 33.4 2E+02 0.007 23.7 21.1 134 91-240 126-265 (300)
121 2kwv_A RAD30 homolog B, DNA po 32.1 17 0.00058 21.9 1.1 21 32-52 17-37 (48)
122 1gxr_A ESG1, transducin-like e 32.0 2.3E+02 0.0077 23.8 18.0 128 90-232 205-335 (337)
123 3nol_A Glutamine cyclotransfer 31.7 2.4E+02 0.0083 24.0 17.5 151 120-298 52-210 (262)
124 3p5b_L Low density lipoprotein 31.5 2.9E+02 0.0099 24.9 28.9 145 78-238 82-238 (400)
125 3jrp_A Fusion protein of prote 31.0 2.5E+02 0.0086 24.0 21.3 190 90-299 79-298 (379)
126 3sov_A LRP-6, low-density lipo 29.8 2.8E+02 0.0094 24.1 19.4 104 121-239 5-115 (318)
127 3e5z_A Putative gluconolactona 29.7 2.4E+02 0.0084 23.5 14.7 105 118-233 36-161 (296)
128 3q6k_A 43.2 kDa salivary prote 28.8 92 0.0031 28.4 6.0 82 262-347 93-194 (381)
129 3nok_A Glutaminyl cyclase; bet 28.4 2.8E+02 0.0096 23.7 19.8 147 118-291 62-212 (268)
130 1jmx_B Amine dehydrogenase; ox 28.2 2.7E+02 0.0093 23.5 24.6 63 82-144 13-78 (349)
131 3v64_C Agrin; beta propeller, 28.0 3.1E+02 0.011 24.1 27.4 165 57-237 19-194 (349)
132 4a2l_A BT_4663, two-component 27.2 4.7E+02 0.016 25.9 20.7 134 92-240 429-577 (795)
133 1yr2_A Prolyl oligopeptidase; 26.9 4.6E+02 0.016 25.7 27.4 190 132-350 244-448 (741)
134 4ery_A WD repeat-containing pr 26.7 2.8E+02 0.0096 23.2 21.6 176 90-286 129-311 (312)
135 3e5z_A Putative gluconolactona 26.5 2.8E+02 0.0096 23.1 26.1 221 90-350 50-293 (296)
136 3qqz_A Putative uncharacterize 26.3 2.9E+02 0.01 23.3 9.5 36 206-241 27-65 (255)
137 2xzh_A Clathrin heavy chain 1; 26.0 2.1E+02 0.0071 25.8 7.5 22 215-236 271-292 (365)
138 3p5b_L Low density lipoprotein 25.8 3.6E+02 0.012 24.2 22.9 33 208-240 161-196 (400)
139 3no2_A Uncharacterized protein 25.8 3E+02 0.01 23.1 9.3 8 215-222 223-230 (276)
140 1qks_A Cytochrome CD1 nitrite 25.1 4.5E+02 0.016 25.0 21.5 201 120-347 166-377 (567)
141 4e54_B DNA damage-binding prot 25.0 3.7E+02 0.013 24.0 18.2 96 130-235 141-241 (435)
142 1k8k_C P40, ARP2/3 complex 41 23.9 3.4E+02 0.012 23.1 22.1 109 117-236 16-129 (372)
143 3azo_A Aminopeptidase; POP fam 23.8 4.8E+02 0.016 24.8 22.3 157 120-297 90-282 (662)
144 1gxr_A ESG1, transducin-like e 23.7 3.2E+02 0.011 22.8 23.0 133 91-237 164-299 (337)
145 4aez_A CDC20, WD repeat-contai 23.6 3.7E+02 0.013 23.6 25.2 189 120-346 186-383 (401)
146 2qc5_A Streptogramin B lactona 23.2 3.1E+02 0.011 22.5 21.3 135 90-240 83-223 (300)
147 2xdw_A Prolyl endopeptidase; a 22.4 5.4E+02 0.018 24.9 30.0 184 132-345 209-416 (710)
148 2qe8_A Uncharacterized protein 22.3 3.8E+02 0.013 23.1 8.9 29 208-236 69-104 (343)
149 3mkq_A Coatomer beta'-subunit; 21.8 5.6E+02 0.019 24.9 22.2 199 114-346 18-220 (814)
150 3iuj_A Prolyl endopeptidase; h 21.4 5.7E+02 0.019 24.8 18.3 201 118-347 137-363 (693)
151 2ad6_A Methanol dehydrogenase 20.9 3.5E+02 0.012 25.8 8.9 108 119-238 61-191 (571)
152 4a11_B DNA excision repair pro 20.8 4E+02 0.014 22.9 21.1 198 114-345 48-278 (408)
153 1jmx_B Amine dehydrogenase; ox 20.6 3.8E+02 0.013 22.5 11.2 27 118-144 8-34 (349)
154 3i2n_A WD repeat-containing pr 20.0 3.9E+02 0.013 22.4 24.1 96 130-236 43-150 (357)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.33 E-value=2.8e-10 Score=103.54 Aligned_cols=241 Identities=12% Similarity=0.104 Sum_probs=152.8
Q ss_pred ceEEEEeec--CcEEEEEcCCCCceEEee-cCCCCCCeEEEecCCeEEEEeCC----CCeEEEEcCCCcceecCCCcccc
Q 017173 80 PWLMYFPKF--GNLYEFYDPAQRKTYSLE-LPELYGSRVCYTKDSWLLLYRPR----THRVFFFNPFTRDMIKLPRFELT 152 (376)
Q Consensus 80 P~l~~~~~~--~~~~~~~~~~~~~~~~~~-lp~~~~~~~~~s~~G~ll~~~~~----~~~~~l~NP~T~~~~~LP~~~~~ 152 (376)
..++++... .+....||+..++|..++ +|.......+...+|.|++..+. .+.+.++||.|++|..+|+++..
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 456655442 245778999999999875 34322222233457777777652 25789999999999988776543
Q ss_pred ee--EEEeecCCCCCCeEEEEEeccC---CCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEeCCeEEEEcc----
Q 017173 153 YQ--IVAFSCAPTSSSCVVFTVKHIS---PTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSL---- 223 (376)
Q Consensus 153 ~~--~~~l~~~p~~~~~~v~~i~~~~---~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~---- 223 (376)
.. .++.. + + .++.+.... .....+++|++.+++|+.+...+ .+ .....++.++|++|++..
T Consensus 92 r~~~~~~~~-~----~-~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~---r~~~~~~~~~~~iyv~GG~~~~ 161 (306)
T 3ii7_A 92 RDSLAACAA-E----G-KIYTSGGSEVGNSALYLFECYDTRTESWHTKPSML-TQ---RCSHGMVEANGLIYVCGGSLGN 161 (306)
T ss_dssp CBSCEEEEE-T----T-EEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCS-SC---CBSCEEEEETTEEEEECCEESC
T ss_pred ccceeEEEE-C----C-EEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCc-CC---cceeEEEEECCEEEEECCCCCC
Confidence 21 12211 1 2 233332111 11235789999999999886432 22 345567888999999864
Q ss_pred ------CCeEEEEeCCCCCceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecCCC--cEEEEEecCCccEEEe
Q 017173 224 ------TGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSEN--PIIFKLDQSKMAWEEM 295 (376)
Q Consensus 224 ------~~~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~~--~~V~~ld~~~~~W~~v 295 (376)
...+.+||+.++.|+.+. +.|. +. ....++..+|+|++++...... -.|+.+|.++.+|+++
T Consensus 162 ~~~~~~~~~~~~yd~~~~~W~~~~-~~p~-~r--------~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~ 231 (306)
T 3ii7_A 162 NVSGRVLNSCEVYDPATETWTELC-PMIE-AR--------KNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMV 231 (306)
T ss_dssp TTTCEECCCEEEEETTTTEEEEEC-CCSS-CC--------BSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEEC
T ss_pred CCcccccceEEEeCCCCCeEEECC-Cccc-hh--------hcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEEC
Confidence 345899999999998764 2221 11 2234566789999997654432 3578889999999999
Q ss_pred eccCCcEEEeeCCcccccCCCCccccCeEEEccccc---CCceEEEEecCCceeecCC
Q 017173 296 KTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRF---FGKRCISYSLNDSRYYPRK 350 (376)
Q Consensus 296 ~~lg~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~---~~~~~~vy~l~~~~~~~~~ 350 (376)
..++.... ..++ ...+|.||+..... ....+.+||+++++|....
T Consensus 232 ~~~p~~r~----~~~~------~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 279 (306)
T 3ii7_A 232 SPMPWKGV----TVKC------AAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANS 279 (306)
T ss_dssp CCCSCCBS----CCEE------EEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEE
T ss_pred CCCCCCcc----ceeE------EEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCC
Confidence 87764210 0011 12467888875421 2356789999999998653
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.33 E-value=1.3e-09 Score=98.87 Aligned_cols=232 Identities=9% Similarity=0.042 Sum_probs=148.3
Q ss_pred EEEEEcCCCCceEEee-cCCCCCCeEEEecCCeEEEEeCC-----CCeEEEEcCCCcceecCCCccccee--EEEeecCC
Q 017173 91 LYEFYDPAQRKTYSLE-LPELYGSRVCYTKDSWLLLYRPR-----THRVFFFNPFTRDMIKLPRFELTYQ--IVAFSCAP 162 (376)
Q Consensus 91 ~~~~~~~~~~~~~~~~-lp~~~~~~~~~s~~G~ll~~~~~-----~~~~~l~NP~T~~~~~LP~~~~~~~--~~~l~~~p 162 (376)
....||+..++|..++ +|.......+...+|.|++..+. .+.+.++||.|++|..+|+++.... .++..
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--- 107 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--- 107 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---
T ss_pred cEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE---
Confidence 4678999999998874 44322222233447777777652 2468999999999999987765321 22221
Q ss_pred CCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEeCCeEEEEcc--------CCeEEEEeCCC
Q 017173 163 TSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSL--------TGWLGVFDPVK 234 (376)
Q Consensus 163 ~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~--------~~~i~~~D~~~ 234 (376)
.+...|++-.........++.|++.+++|+.+...+ .+ .....++.++|++|++.. ...+.+||+.+
T Consensus 108 -~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~---r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~ 182 (302)
T 2xn4_A 108 -NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMN-TR---RSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATT 182 (302)
T ss_dssp -TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCS-SC---CBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTT
T ss_pred -CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCC-Cc---ccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCC
Confidence 112222221111112346889999999999886533 22 334567888999999863 24599999999
Q ss_pred CCceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecCCC--cEEEEEecCCccEEEeeccCCcEEEeeCCcccc
Q 017173 235 RDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSEN--PIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQS 312 (376)
Q Consensus 235 ~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~~--~~V~~ld~~~~~W~~v~~lg~~~lFlg~~~s~~ 312 (376)
+.|+.+. +.|. +. ....++..+|+|++++...... -.|+.+|.++.+|+++..++..-. +.++
T Consensus 183 ~~W~~~~-~~p~-~r--------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~----~~~~- 247 (302)
T 2xn4_A 183 NEWTYIA-EMST-RR--------SGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRR----NAGV- 247 (302)
T ss_dssp TEEEEEC-CCSS-CC--------BSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCB----SCEE-
T ss_pred CcEEECC-CCcc-cc--------ccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccc----cCeE-
Confidence 9998763 2221 11 1234566789999998754432 368888999999999988763210 0011
Q ss_pred cCCCCccccCeEEEccccc---CCceEEEEecCCceeecCC
Q 017173 313 RADLPGIMRNSVYFSKVRF---FGKRCISYSLNDSRYYPRK 350 (376)
Q Consensus 313 ~~~~~g~~~n~Iyf~~~~~---~~~~~~vy~l~~~~~~~~~ 350 (376)
...+|.||+.-... ....+.+||+++++|..+.
T Consensus 248 -----~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 248 -----CAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp -----EEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred -----EEECCEEEEECCcCCCcccccEEEEcCCCCeEEECC
Confidence 12467888875421 1245789999999999764
No 3
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.31 E-value=3.6e-09 Score=96.79 Aligned_cols=232 Identities=17% Similarity=0.215 Sum_probs=146.8
Q ss_pred cEEEEEcCCCCceEEeecCC-CCCCe-EEEecCCeEEEEeCC-----------CCeEEEEcCCCcceecCCCccccee--
Q 017173 90 NLYEFYDPAQRKTYSLELPE-LYGSR-VCYTKDSWLLLYRPR-----------THRVFFFNPFTRDMIKLPRFELTYQ-- 154 (376)
Q Consensus 90 ~~~~~~~~~~~~~~~~~lp~-~~~~~-~~~s~~G~ll~~~~~-----------~~~~~l~NP~T~~~~~LP~~~~~~~-- 154 (376)
.....|||..++|...++|. .+... .+...+|.|++..+. ...+.++||.|++|..+|+++....
T Consensus 24 ~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 103 (318)
T 2woz_A 24 TAAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLF 103 (318)
T ss_dssp SEEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSC
T ss_pred cceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccccc
Confidence 34678999999998866653 22222 233457777776651 1138899999999999988765321
Q ss_pred EEEeecCCCCCCeEEEEEec-cCC-CeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEeCCeEEEEcc-------CC
Q 017173 155 IVAFSCAPTSSSCVVFTVKH-ISP-TVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSL-------TG 225 (376)
Q Consensus 155 ~~~l~~~p~~~~~~v~~i~~-~~~-~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~-------~~ 225 (376)
.++.. .+...|++-.. ... ....+..|++.+++|+.+...+ .+ .....++.++|++|++.. ..
T Consensus 104 ~~~~~----~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~---r~~~~~~~~~~~iyv~GG~~~~~~~~~ 175 (318)
T 2woz_A 104 GLGEV----DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLP-IK---VYGHNVISHNGMIYCLGGKTDDKKCTN 175 (318)
T ss_dssp EEEEE----TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCS-SC---EESCEEEEETTEEEEECCEESSSCBCC
T ss_pred ceEEE----CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCC-Cc---ccccEEEEECCEEEEEcCCCCCCCccc
Confidence 12221 11222222111 111 1246889999999999886432 22 334556779999999864 24
Q ss_pred eEEEEeCCCCCceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecCCC--cEEEEEecCCccEEEeeccCCcEE
Q 017173 226 WLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSEN--PIIFKLDQSKMAWEEMKTLDGLTL 303 (376)
Q Consensus 226 ~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~~--~~V~~ld~~~~~W~~v~~lg~~~l 303 (376)
.+.+||+.++.|+.+. +.| .+. .....+..+|+|++++...... -.|+.+|.++.+|+++..++..-.
T Consensus 176 ~~~~yd~~~~~W~~~~-~~p-~~r--------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~ 245 (318)
T 2woz_A 176 RVFIYNPKKGDWKDLA-PMK-TPR--------SMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERS 245 (318)
T ss_dssp CEEEEETTTTEEEEEC-CCS-SCC--------BSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCB
T ss_pred eEEEEcCCCCEEEECC-CCC-CCc--------ccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCccc
Confidence 5999999999998764 222 111 1224566789999998765543 368888999999999988764210
Q ss_pred EeeCCcccccCCCCccccCeEEEccccc------------CCceEEEEecCCceeecC
Q 017173 304 FASFLSSQSRADLPGIMRNSVYFSKVRF------------FGKRCISYSLNDSRYYPR 349 (376)
Q Consensus 304 Flg~~~s~~~~~~~g~~~n~Iyf~~~~~------------~~~~~~vy~l~~~~~~~~ 349 (376)
..++ ...+|.||+.-... ....+.+||+++++|+.+
T Consensus 246 ----~~~~------~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 246 ----SISL------VSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp ----SCEE------EEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred ----ceEE------EEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 0011 12456777764321 134578999999999865
No 4
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.31 E-value=7.3e-10 Score=101.31 Aligned_cols=231 Identities=13% Similarity=0.122 Sum_probs=146.9
Q ss_pred cEEEEEcCCCCceEEeecCC-CCCCe-EEEecCCeEEEEeCC-----------CCeEEEEcCCCcceecCCCccccee--
Q 017173 90 NLYEFYDPAQRKTYSLELPE-LYGSR-VCYTKDSWLLLYRPR-----------THRVFFFNPFTRDMIKLPRFELTYQ-- 154 (376)
Q Consensus 90 ~~~~~~~~~~~~~~~~~lp~-~~~~~-~~~s~~G~ll~~~~~-----------~~~~~l~NP~T~~~~~LP~~~~~~~-- 154 (376)
.....|||.+++|...++|. .+... .+...+|.|++..+. .+.+.++||.|++|..+|+++....
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 92 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLF 92 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESC
T ss_pred CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhce
Confidence 45778999999998766653 22222 223446666665541 1238899999999999988865432
Q ss_pred EEEeecCCCCCCeEEEEEecc-----CCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEeCCeEEEEccC-----
Q 017173 155 IVAFSCAPTSSSCVVFTVKHI-----SPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSLT----- 224 (376)
Q Consensus 155 ~~~l~~~p~~~~~~v~~i~~~-----~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~~----- 224 (376)
.++.. ++ .++.+... ......+..|++.+++|+.+...+ .+ .....++.++|++|++...
T Consensus 93 ~~~~~-----~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~---r~~~~~~~~~~~iyv~GG~~~~~~ 162 (315)
T 4asc_A 93 GLGEA-----LN-SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLP-YV---VYGHTVLSHMDLVYVIGGKGSDRK 162 (315)
T ss_dssp EEEEE-----TT-EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCS-SC---CBSCEEEEETTEEEEECCBCTTSC
T ss_pred eEEEE-----CC-EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCC-Cc---ccceeEEEECCEEEEEeCCCCCCc
Confidence 12221 12 22222211 111235789999999999876432 22 3445678899999998753
Q ss_pred --CeEEEEeCCCCCceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecCCC--cEEEEEecCCccEEEeeccCC
Q 017173 225 --GWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSEN--PIIFKLDQSKMAWEEMKTLDG 300 (376)
Q Consensus 225 --~~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~~--~~V~~ld~~~~~W~~v~~lg~ 300 (376)
..+.+||+.++.|+.+. +.|. +. .....+..+|+|++++...... -.|+.+|.++.+|+++..++.
T Consensus 163 ~~~~~~~yd~~~~~W~~~~-~~p~-~r--------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 232 (315)
T 4asc_A 163 CLNKMCVYDPKKFEWKELA-PMQT-AR--------SLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQ 232 (315)
T ss_dssp BCCCEEEEETTTTEEEECC-CCSS-CC--------BSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSS
T ss_pred ccceEEEEeCCCCeEEECC-CCCC-ch--------hceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCC
Confidence 46999999999998764 2221 11 2234566799999998866543 368888999999999987753
Q ss_pred cEEEeeCCcccccCCCCccccCeEEEccccc------------CCceEEEEecCCceeecCC
Q 017173 301 LTLFASFLSSQSRADLPGIMRNSVYFSKVRF------------FGKRCISYSLNDSRYYPRK 350 (376)
Q Consensus 301 ~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~------------~~~~~~vy~l~~~~~~~~~ 350 (376)
.-. + .++ ...+|.||+.-... ....+.+||+++++|+...
T Consensus 233 ~r~--~--~~~------~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 284 (315)
T 4asc_A 233 ERS--S--LSL------VSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL 284 (315)
T ss_dssp CCB--S--CEE------EEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE
T ss_pred ccc--c--eeE------EEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc
Confidence 210 0 000 12466777764321 1234679999999999763
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.30 E-value=1e-09 Score=99.54 Aligned_cols=230 Identities=11% Similarity=0.118 Sum_probs=147.6
Q ss_pred EEEEEcCCCCceEEee-cCCCCCCeEEEecCCeEEEEeCC-----CCeEEEEcCCCcc---eecCCCccccee--EEEee
Q 017173 91 LYEFYDPAQRKTYSLE-LPELYGSRVCYTKDSWLLLYRPR-----THRVFFFNPFTRD---MIKLPRFELTYQ--IVAFS 159 (376)
Q Consensus 91 ~~~~~~~~~~~~~~~~-lp~~~~~~~~~s~~G~ll~~~~~-----~~~~~l~NP~T~~---~~~LP~~~~~~~--~~~l~ 159 (376)
....||+.+++|..++ +|...........+|.|++..+. .+.+.++||.|++ |..+|+++.... .++..
T Consensus 32 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~ 111 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL 111 (301)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE
T ss_pred EEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE
Confidence 4678999999998875 44322222233457777776552 2469999999999 998887765321 22221
Q ss_pred cCCCCCCeEEEEEeccCC--CeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEeCCeEEEEcc------CCeEEEEe
Q 017173 160 CAPTSSSCVVFTVKHISP--TVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSL------TGWLGVFD 231 (376)
Q Consensus 160 ~~p~~~~~~v~~i~~~~~--~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~------~~~i~~~D 231 (376)
+ + .++.+..... ....+++|++.+++|+.+...+ .+ .....++.++|++|++.. ...+.+||
T Consensus 112 -~----~-~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~---r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d 181 (301)
T 2vpj_A 112 -G----D-MIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQ-TA---REGAGLVVASGVIYCLGGYDGLNILNSVEKYD 181 (301)
T ss_dssp -T----T-EEEEECCBCSSCBCCEEEEEETTTTEEEEEEECS-SC---CBSCEEEEETTEEEEECCBCSSCBCCCEEEEE
T ss_pred -C----C-EEEEEcccCCCcccceEEEEcCCCCeEEECCCCC-CC---cccceEEEECCEEEEECCCCCCcccceEEEEe
Confidence 1 2 2333322111 1236889999999999886533 22 334567788999999864 35699999
Q ss_pred CCCCCceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecCC--CcEEEEEecCCccEEEeeccCCcEEEeeCCc
Q 017173 232 PVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSE--NPIIFKLDQSKMAWEEMKTLDGLTLFASFLS 309 (376)
Q Consensus 232 ~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~--~~~V~~ld~~~~~W~~v~~lg~~~lFlg~~~ 309 (376)
+.++.|+.+. +.|. +. ....++..+|+|++++..... .-.|+.+|.++.+|+++..++.... ..
T Consensus 182 ~~~~~W~~~~-~~p~-~r--------~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~----~~ 247 (301)
T 2vpj_A 182 PHTGHWTNVT-PMAT-KR--------SGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRC----YV 247 (301)
T ss_dssp TTTTEEEEEC-CCSS-CC--------BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCB----SC
T ss_pred CCCCcEEeCC-CCCc-cc--------ccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCccc----ce
Confidence 9999998763 2221 11 123456678999998775443 2468888999999999987764210 00
Q ss_pred ccccCCCCccccCeEEEcccccC---CceEEEEecCCceeecCC
Q 017173 310 SQSRADLPGIMRNSVYFSKVRFF---GKRCISYSLNDSRYYPRK 350 (376)
Q Consensus 310 s~~~~~~~g~~~n~Iyf~~~~~~---~~~~~vy~l~~~~~~~~~ 350 (376)
++ ...+|.||+...... ...+.+||+++++|....
T Consensus 248 ~~------~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 248 GA------TVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVT 285 (301)
T ss_dssp EE------EEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEE
T ss_pred eE------EEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcC
Confidence 11 124678888754211 246789999999998653
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.26 E-value=1.1e-09 Score=99.90 Aligned_cols=230 Identities=12% Similarity=0.115 Sum_probs=146.1
Q ss_pred cEEEEEcCCCCceEEee-cCCCCCCeEEEecCCeEEEEeCC---------CCeEEEEcCCCcceecCCCccccee--EEE
Q 017173 90 NLYEFYDPAQRKTYSLE-LPELYGSRVCYTKDSWLLLYRPR---------THRVFFFNPFTRDMIKLPRFELTYQ--IVA 157 (376)
Q Consensus 90 ~~~~~~~~~~~~~~~~~-lp~~~~~~~~~s~~G~ll~~~~~---------~~~~~l~NP~T~~~~~LP~~~~~~~--~~~ 157 (376)
+....||+..++|..++ +|.......+...+|.|++..+. .+.+.++||.|++|..+|+++.... .++
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 118 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVG 118 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEE
Confidence 35678999999999874 44322222233447777776543 2468999999999999987765321 122
Q ss_pred eecCCCCCCeEEEEEeccCCC--eEEEEEEecCCCCeeeeccCCCCCccccceeeeEEeCCeEEEEcc------CCeEEE
Q 017173 158 FSCAPTSSSCVVFTVKHISPT--VVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSL------TGWLGV 229 (376)
Q Consensus 158 l~~~p~~~~~~v~~i~~~~~~--~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~------~~~i~~ 229 (376)
.. + + .++.+...... ...++.|++.+++|+.+...+ .+ .....++.++|++|++.. ...+.+
T Consensus 119 ~~-~----~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~---r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 188 (308)
T 1zgk_A 119 VI-D----G-HIYAVGGSHGCIHHNSVERYEPERDEWHLVAPML-TR---RIGVGVAVLNRLLYAVGGFDGTNRLNSAEC 188 (308)
T ss_dssp EE-T----T-EEEEECCEETTEECCCEEEEETTTTEEEECCCCS-SC---CBSCEEEEETTEEEEECCBCSSCBCCCEEE
T ss_pred EE-C----C-EEEEEcCCCCCcccccEEEECCCCCeEeECCCCC-cc---ccceEEEEECCEEEEEeCCCCCCcCceEEE
Confidence 11 1 1 23333211111 125789999999999886432 22 334556788999999864 246999
Q ss_pred EeCCCCCceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecCC--CcEEEEEecCCccEEEeeccCCcEEEeeC
Q 017173 230 FDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSE--NPIIFKLDQSKMAWEEMKTLDGLTLFASF 307 (376)
Q Consensus 230 ~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~--~~~V~~ld~~~~~W~~v~~lg~~~lFlg~ 307 (376)
||+.++.|+.+. +.|. +. .....+..+|+|++++..... .-.|+.+|.++.+|+++..++..-.
T Consensus 189 yd~~~~~W~~~~-~~p~-~r--------~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~---- 254 (308)
T 1zgk_A 189 YYPERNEWRMIT-AMNT-IR--------SGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRS---- 254 (308)
T ss_dssp EETTTTEEEECC-CCSS-CC--------BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCB----
T ss_pred EeCCCCeEeeCC-CCCC-cc--------ccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCcc----
Confidence 999999998763 2221 11 122455668999999865543 2468888999999999987763210
Q ss_pred CcccccCCCCccccCeEEEccccc---CCceEEEEecCCceeecC
Q 017173 308 LSSQSRADLPGIMRNSVYFSKVRF---FGKRCISYSLNDSRYYPR 349 (376)
Q Consensus 308 ~~s~~~~~~~g~~~n~Iyf~~~~~---~~~~~~vy~l~~~~~~~~ 349 (376)
..++ ...+|.||+.-... ....+.+||+++++|+..
T Consensus 255 ~~~~------~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 293 (308)
T 1zgk_A 255 ALGI------TVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEV 293 (308)
T ss_dssp SCEE------EEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEE
T ss_pred ceEE------EEECCEEEEEcCcCCCcccceEEEEcCCCCEEeec
Confidence 0011 12467888875421 234678999999999865
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.05 E-value=1.8e-08 Score=91.46 Aligned_cols=226 Identities=9% Similarity=0.046 Sum_probs=139.2
Q ss_pred ccceehhccccccccCccccCCCCC------CceEEEEeecC----cEEEEEcCCCCceEEee-cCCCCCCeEEEecCCe
Q 017173 54 EDNVHASVVCKKWHAPAISVRVVNQ------SPWLMYFPKFG----NLYEFYDPAQRKTYSLE-LPELYGSRVCYTKDSW 122 (376)
Q Consensus 54 ~~l~r~r~VCk~Wrs~~~~~~~~~~------~P~l~~~~~~~----~~~~~~~~~~~~~~~~~-lp~~~~~~~~~s~~G~ 122 (376)
.++.+|-..-..|..+...+..+.. .-.+++..... +....||+..++|..++ +|...........+|.
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ 103 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGK 103 (306)
T ss_dssp TSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTE
T ss_pred ceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCE
Confidence 3455555556667766433321111 12233333211 35667999999998875 4432222233345777
Q ss_pred EEEEeCC------CCeEEEEcCCCcceecCCCccccee--EEEeecCCCCCCeEEEEEec--cCCC----eEEEEEEecC
Q 017173 123 LLLYRPR------THRVFFFNPFTRDMIKLPRFELTYQ--IVAFSCAPTSSSCVVFTVKH--ISPT----VVAISTCHPG 188 (376)
Q Consensus 123 ll~~~~~------~~~~~l~NP~T~~~~~LP~~~~~~~--~~~l~~~p~~~~~~v~~i~~--~~~~----~~~~~~y~~~ 188 (376)
|++..+. .+.+.++||.|++|..+|+++.... .++.. . + .++.+.. .... ...++.|++.
T Consensus 104 iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~-~-~iyv~GG~~~~~~~~~~~~~~~~yd~~ 177 (306)
T 3ii7_A 104 IYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA----N-G-LIYVCGGSLGNNVSGRVLNSCEVYDPA 177 (306)
T ss_dssp EEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE----T-T-EEEEECCEESCTTTCEECCCEEEEETT
T ss_pred EEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE----C-C-EEEEECCCCCCCCcccccceEEEeCCC
Confidence 7776542 2469999999999999887765321 12221 1 1 2222221 1111 2357899999
Q ss_pred CCCeeeeccCCCCCccccceeeeEEeCCeEEEEcc------CCeEEEEeCCCCCceeeeeCCCCCCcccccccccceeEE
Q 017173 189 ATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSL------TGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFM 262 (376)
Q Consensus 189 ~~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~------~~~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~L 262 (376)
+++|+.+...+ .+ .....++.++|++|++.. ...+.+||+.++.|+.+. +.|. +. ....+
T Consensus 178 ~~~W~~~~~~p-~~---r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~p~-~r--------~~~~~ 243 (306)
T 3ii7_A 178 TETWTELCPMI-EA---RKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVS-PMPW-KG--------VTVKC 243 (306)
T ss_dssp TTEEEEECCCS-SC---CBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECC-CCSC-CB--------SCCEE
T ss_pred CCeEEECCCcc-ch---hhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECC-CCCC-Cc--------cceeE
Confidence 99999887432 22 345567888999999864 246999999999998763 2221 11 22345
Q ss_pred EEECCcEEEEEEecCC--CcEEEEEecCCccEEEeeccC
Q 017173 263 VEHKGDILVIYTCCSE--NPIIFKLDQSKMAWEEMKTLD 299 (376)
Q Consensus 263 v~~~G~LllV~~~~~~--~~~V~~ld~~~~~W~~v~~lg 299 (376)
+..+|+|++++..... .-.|+.+|.++.+|.++..++
T Consensus 244 ~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~ 282 (306)
T 3ii7_A 244 AAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVR 282 (306)
T ss_dssp EEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEE
T ss_pred EEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcc
Confidence 5668999999875442 247899999999999998775
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.04 E-value=1.7e-08 Score=91.94 Aligned_cols=228 Identities=12% Similarity=0.078 Sum_probs=142.4
Q ss_pred cccceehhccccccccCccccCCCCC------CceEEEEeec----C-----cEEEEEcCCCCceEEee-cCCCCCCeEE
Q 017173 53 LEDNVHASVVCKKWHAPAISVRVVNQ------SPWLMYFPKF----G-----NLYEFYDPAQRKTYSLE-LPELYGSRVC 116 (376)
Q Consensus 53 ~~~l~r~r~VCk~Wrs~~~~~~~~~~------~P~l~~~~~~----~-----~~~~~~~~~~~~~~~~~-lp~~~~~~~~ 116 (376)
+.++.++-...+.|..+...+..+.. .-.+++.... . +....||+.+++|..++ +|........
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 117 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGV 117 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEE
T ss_pred cceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEE
Confidence 45667777778888877443321111 1233333221 1 23567899999998875 4432222233
Q ss_pred EecCCeEEEEeCC-----CCeEEEEcCCCcceecCCCccccee--EEEeecCCCCCCeEEEEEeccCC--CeEEEEEEec
Q 017173 117 YTKDSWLLLYRPR-----THRVFFFNPFTRDMIKLPRFELTYQ--IVAFSCAPTSSSCVVFTVKHISP--TVVAISTCHP 187 (376)
Q Consensus 117 ~s~~G~ll~~~~~-----~~~~~l~NP~T~~~~~LP~~~~~~~--~~~l~~~p~~~~~~v~~i~~~~~--~~~~~~~y~~ 187 (376)
...+|.|++..+. .+.+.++||.|++|..+++++.... .++.. ++ .++.+..... ....++.|++
T Consensus 118 ~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~yd~ 191 (308)
T 1zgk_A 118 GVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-----NR-LLYAVGGFDGTNRLNSAECYYP 191 (308)
T ss_dssp EEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-----TT-EEEEECCBCSSCBCCCEEEEET
T ss_pred EEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-----CC-EEEEEeCCCCCCcCceEEEEeC
Confidence 3447777777542 2468999999999999887764321 12211 12 2333322111 1235789999
Q ss_pred CCCCeeeeccCCCCCccccceeeeEEeCCeEEEEcc------CCeEEEEeCCCCCceeeeeCCCCCCcccccccccceeE
Q 017173 188 GATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSL------TGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKF 261 (376)
Q Consensus 188 ~~~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~------~~~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~ 261 (376)
.+++|+.+...+ .+ .....++.++|++|++.. ...+.+||+.++.|+.+. +.|. +. ....
T Consensus 192 ~~~~W~~~~~~p-~~---r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~p~-~r--------~~~~ 257 (308)
T 1zgk_A 192 ERNEWRMITAMN-TI---RSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVA-PMKH-RR--------SALG 257 (308)
T ss_dssp TTTEEEECCCCS-SC---CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECC-CCSS-CC--------BSCE
T ss_pred CCCeEeeCCCCC-Cc---cccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECC-CCCC-Cc--------cceE
Confidence 999999886432 22 334567888999999974 256999999999998764 2221 11 1224
Q ss_pred EEEECCcEEEEEEecCCC--cEEEEEecCCccEEEeeccCC
Q 017173 262 MVEHKGDILVIYTCCSEN--PIIFKLDQSKMAWEEMKTLDG 300 (376)
Q Consensus 262 Lv~~~G~LllV~~~~~~~--~~V~~ld~~~~~W~~v~~lg~ 300 (376)
++..+|+|++++...... -.|+.+|.++.+|.++..|+.
T Consensus 258 ~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~ 298 (308)
T 1zgk_A 258 ITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTS 298 (308)
T ss_dssp EEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSS
T ss_pred EEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCCC
Confidence 555689999987754432 478889999999999988864
No 9
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.98 E-value=1.1e-07 Score=88.17 Aligned_cols=232 Identities=12% Similarity=0.067 Sum_probs=135.0
Q ss_pred cEEEEEcCC--CCceEEee-cC-CCCCCeEEEecCCeEEEEeCC----------CCeEEEEcCCCcceecCCCcc-ccee
Q 017173 90 NLYEFYDPA--QRKTYSLE-LP-ELYGSRVCYTKDSWLLLYRPR----------THRVFFFNPFTRDMIKLPRFE-LTYQ 154 (376)
Q Consensus 90 ~~~~~~~~~--~~~~~~~~-lp-~~~~~~~~~s~~G~ll~~~~~----------~~~~~l~NP~T~~~~~LP~~~-~~~~ 154 (376)
+....||+. .++|..++ +| .......+...+|.|++..+. .+.+.++||.|++|..+++++ ....
T Consensus 31 ~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~ 110 (357)
T 2uvk_A 31 TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMA 110 (357)
T ss_dssp TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCS
T ss_pred CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccc
Confidence 456788987 48898764 45 222222233446777766543 246899999999999988765 3221
Q ss_pred --EEEeecCCCCCCeEEEEEeccCC------------------------------------CeEEEEEEecCCCCeeeec
Q 017173 155 --IVAFSCAPTSSSCVVFTVKHISP------------------------------------TVVAISTCHPGATEWVTDN 196 (376)
Q Consensus 155 --~~~l~~~p~~~~~~v~~i~~~~~------------------------------------~~~~~~~y~~~~~~W~~~~ 196 (376)
.++. .+ + .++.+..... -...+++|++.+++|+.+.
T Consensus 111 ~~~~~~-~~----~-~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 184 (357)
T 2uvk_A 111 GHVTFV-HN----G-KAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAG 184 (357)
T ss_dssp SEEEEE-ET----T-EEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEE
T ss_pred cceEEE-EC----C-EEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECC
Confidence 1222 11 2 2333322110 0136889999999999886
Q ss_pred cCCCCCccccceeeeEEeCCeEEEEcc-------CCeEEEEeC--CCCCceeeeeCCCCCCcccccccccceeEEEEECC
Q 017173 197 YQNRLPFVSSIWNKLVFCNGIFYCLSL-------TGWLGVFDP--VKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKG 267 (376)
Q Consensus 197 ~~~~~p~~~~~~~~~v~~~G~~Y~l~~-------~~~i~~~D~--~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G 267 (376)
..+ .+ ......++.++|++|++.. ...+.+||+ .+..|+.+.. .| .|.. .....++..+|
T Consensus 185 ~~p-~~--~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~-~~-~~~~------~~~~~~~~~~~ 253 (357)
T 2uvk_A 185 ESP-WY--GTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAP-VS-SPDG------VAGGFAGISND 253 (357)
T ss_dssp ECS-SC--CCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCC-SS-TTTC------CBSCEEEEETT
T ss_pred CCC-CC--CcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCC-CC-CCcc------cccceEEEECC
Confidence 433 11 1223567889999999864 346888987 7788976532 11 1111 01234677789
Q ss_pred cEEEEEEecCC------------------C-cEEEEEecCCccEEEeeccCCcEEEeeCCcccccCCCCccccCeEEEcc
Q 017173 268 DILVIYTCCSE------------------N-PIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSK 328 (376)
Q Consensus 268 ~LllV~~~~~~------------------~-~~V~~ld~~~~~W~~v~~lg~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~ 328 (376)
+|++++..... . ..|+.+|.++.+|+++..++..-. + .++ -..+|.||+.-
T Consensus 254 ~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~--~--~~~------~~~~~~i~v~G 323 (357)
T 2uvk_A 254 SLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRA--Y--GVS------LPWNNSLLIIG 323 (357)
T ss_dssp EEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCB--S--SEE------EEETTEEEEEE
T ss_pred EEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcc--c--cee------EEeCCEEEEEe
Confidence 99999764321 1 246777999999999988764210 0 111 12467888875
Q ss_pred cccC----CceEEEEecCCceeec
Q 017173 329 VRFF----GKRCISYSLNDSRYYP 348 (376)
Q Consensus 329 ~~~~----~~~~~vy~l~~~~~~~ 348 (376)
.... ...+.+|+++++++.-
T Consensus 324 G~~~~~~~~~~v~~l~~~~~~~~~ 347 (357)
T 2uvk_A 324 GETAGGKAVTDSVLITVKDNKVTV 347 (357)
T ss_dssp EECGGGCEEEEEEEEEC-CCSCEE
T ss_pred eeCCCCCEeeeEEEEEEcCcEeEe
Confidence 4211 2456788999988764
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.96 E-value=3.4e-08 Score=89.37 Aligned_cols=227 Identities=10% Similarity=0.100 Sum_probs=139.2
Q ss_pred ccceehhccccccccCccccCCCCC------CceEEEEeecC-----cEEEEEcCCCCc---eEEee-cCCCCCCeEEEe
Q 017173 54 EDNVHASVVCKKWHAPAISVRVVNQ------SPWLMYFPKFG-----NLYEFYDPAQRK---TYSLE-LPELYGSRVCYT 118 (376)
Q Consensus 54 ~~l~r~r~VCk~Wrs~~~~~~~~~~------~P~l~~~~~~~-----~~~~~~~~~~~~---~~~~~-lp~~~~~~~~~s 118 (376)
.++.++-...+.|..+...+..+.. .-.++++.... +....||+..++ |..++ +|.......+..
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~ 110 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT 110 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE
Confidence 3555566666677766533321111 12333333211 346678999999 98774 443222223334
Q ss_pred cCCeEEEEeCC-----CCeEEEEcCCCcceecCCCccccee--EEEeecCCCCCCeEEEEEeccCC--CeEEEEEEecCC
Q 017173 119 KDSWLLLYRPR-----THRVFFFNPFTRDMIKLPRFELTYQ--IVAFSCAPTSSSCVVFTVKHISP--TVVAISTCHPGA 189 (376)
Q Consensus 119 ~~G~ll~~~~~-----~~~~~l~NP~T~~~~~LP~~~~~~~--~~~l~~~p~~~~~~v~~i~~~~~--~~~~~~~y~~~~ 189 (376)
.+|.|++..+. .+.+.++||.|++|..+|+++.... .++.. + + .++.+..... ....++.|++.+
T Consensus 111 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~----~-~iyv~GG~~~~~~~~~~~~~d~~~ 184 (301)
T 2vpj_A 111 LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA-S----G-VIYCLGGYDGLNILNSVEKYDPHT 184 (301)
T ss_dssp ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE-T----T-EEEEECCBCSSCBCCCEEEEETTT
T ss_pred ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE-C----C-EEEEECCCCCCcccceEEEEeCCC
Confidence 57888877642 2468999999999998876654321 12211 1 2 2333322111 123578999999
Q ss_pred CCeeeeccCCCCCccccceeeeEEeCCeEEEEcc------CCeEEEEeCCCCCceeeeeCCCCCCcccccccccceeEEE
Q 017173 190 TEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSL------TGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMV 263 (376)
Q Consensus 190 ~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~------~~~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv 263 (376)
++|+.+...+ .+ .....++.++|++|++.. ...+.+||+.++.|+.+.. .|. +. .....+
T Consensus 185 ~~W~~~~~~p-~~---r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~-~p~-~r--------~~~~~~ 250 (301)
T 2vpj_A 185 GHWTNVTPMA-TK---RSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTS-MTT-PR--------CYVGAT 250 (301)
T ss_dssp TEEEEECCCS-SC---CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECC-CSS-CC--------BSCEEE
T ss_pred CcEEeCCCCC-cc---cccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCC-CCC-cc--------cceeEE
Confidence 9999886432 22 335567888999999874 2469999999999987642 221 11 122345
Q ss_pred EECCcEEEEEEecCCC--cEEEEEecCCccEEEeeccCC
Q 017173 264 EHKGDILVIYTCCSEN--PIIFKLDQSKMAWEEMKTLDG 300 (376)
Q Consensus 264 ~~~G~LllV~~~~~~~--~~V~~ld~~~~~W~~v~~lg~ 300 (376)
..+|+|++++...... -.|+.+|.++.+|.++..|+.
T Consensus 251 ~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~ 289 (301)
T 2vpj_A 251 VLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGT 289 (301)
T ss_dssp EETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEEE
T ss_pred EECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCCc
Confidence 5689999887754433 468999999999999987753
No 11
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.94 E-value=3.7e-08 Score=90.00 Aligned_cols=184 Identities=14% Similarity=0.187 Sum_probs=118.0
Q ss_pred EEEEcCCCCceEEee-cCCCCCCeEEEecCCeEEEEeCC-------CCeEEEEcCCCcceecCCCccccee--EEEeecC
Q 017173 92 YEFYDPAQRKTYSLE-LPELYGSRVCYTKDSWLLLYRPR-------THRVFFFNPFTRDMIKLPRFELTYQ--IVAFSCA 161 (376)
Q Consensus 92 ~~~~~~~~~~~~~~~-lp~~~~~~~~~s~~G~ll~~~~~-------~~~~~l~NP~T~~~~~LP~~~~~~~--~~~l~~~ 161 (376)
...||+..++|..++ +|........+..+|.|++.... .+.+.++||.|++|..+++++.... .++. .
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~- 157 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-H- 157 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-E-
T ss_pred EEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-E-
Confidence 456899999998764 44322222333447777766542 1368999999999998877654321 1222 1
Q ss_pred CCCCCeEEEEEecc--C-CCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEeCCeEEEEcc------CCeEEEEeC
Q 017173 162 PTSSSCVVFTVKHI--S-PTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSL------TGWLGVFDP 232 (376)
Q Consensus 162 p~~~~~~v~~i~~~--~-~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~------~~~i~~~D~ 232 (376)
. + .++.+... . .....+++|++.+++|+.+...+ .+ .....++.++|++|++.. ...+.+||+
T Consensus 158 --~-~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~---r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~ 229 (318)
T 2woz_A 158 --N-G-MIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMK-TP---RSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDL 229 (318)
T ss_dssp --T-T-EEEEECCEESSSCBCCCEEEEETTTTEEEEECCCS-SC---CBSCEEEEETTEEEEEEEEETTEEEEEEEEEET
T ss_pred --C-C-EEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCC-CC---cccceEEEECCEEEEEcCcCCCCccceEEEEEC
Confidence 1 2 23332211 1 11235789999999999887432 22 334567888999999864 245889999
Q ss_pred CCCCceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecC-----------CCcEEEEEecCCccEEEe
Q 017173 233 VKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCS-----------ENPIIFKLDQSKMAWEEM 295 (376)
Q Consensus 233 ~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~-----------~~~~V~~ld~~~~~W~~v 295 (376)
.++.|+.+.. .|. +. ....++..+|+|++++.... ..-.||.+|.++.+|+++
T Consensus 230 ~~~~W~~~~~-~p~-~r--------~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 230 KTNKWEVMTE-FPQ-ER--------SSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp TTCCEEECCC-CSS-CC--------BSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CCCeEEECCC-CCC-cc--------cceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 9999987632 221 11 12345667899999876432 124689999999999998
No 12
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.94 E-value=5.6e-08 Score=87.99 Aligned_cols=189 Identities=11% Similarity=0.125 Sum_probs=121.6
Q ss_pred EEEEEcCCCCceEEee-cCCCCCCeEEEecCCeEEEEeCC-----CCeEEEEcCCCcceecCCCccccee--EEEeecCC
Q 017173 91 LYEFYDPAQRKTYSLE-LPELYGSRVCYTKDSWLLLYRPR-----THRVFFFNPFTRDMIKLPRFELTYQ--IVAFSCAP 162 (376)
Q Consensus 91 ~~~~~~~~~~~~~~~~-lp~~~~~~~~~s~~G~ll~~~~~-----~~~~~l~NP~T~~~~~LP~~~~~~~--~~~l~~~p 162 (376)
....||+..++|..++ +|...........+|.+++..+. .+.+.++||.|++|..+++++.... .++.. +
T Consensus 78 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~- 155 (302)
T 2xn4_A 78 TVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV-G- 155 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE-T-
T ss_pred ceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE-C-
Confidence 4667999999999875 44322222233447777776542 1368899999999999887765321 12211 1
Q ss_pred CCCCeEEEEEecc-CCC---eEEEEEEecCCCCeeeeccCCCCCccccceeeeEEeCCeEEEEcc------CCeEEEEeC
Q 017173 163 TSSSCVVFTVKHI-SPT---VVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSL------TGWLGVFDP 232 (376)
Q Consensus 163 ~~~~~~v~~i~~~-~~~---~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~------~~~i~~~D~ 232 (376)
+ .++.+... ... ...++.|++.+++|+.+...+ .+ .....++.++|++|++.. ...+.+||+
T Consensus 156 ---~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~---r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~ 227 (302)
T 2xn4_A 156 ---G-LLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMS-TR---RSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDP 227 (302)
T ss_dssp ---T-EEEEECCEETTTTEECCCEEEEETTTTEEEEECCCS-SC---CBSCEEEEETTEEEEECCBSSSSBCCCEEEEET
T ss_pred ---C-EEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCc-cc---cccccEEEECCEEEEECCCCCCcccceEEEEeC
Confidence 1 23332211 111 235789999999999886432 22 334567888999999964 246999999
Q ss_pred CCCCceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecCC--CcEEEEEecCCccEEEee-ccC
Q 017173 233 VKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSE--NPIIFKLDQSKMAWEEMK-TLD 299 (376)
Q Consensus 233 ~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~--~~~V~~ld~~~~~W~~v~-~lg 299 (376)
.++.|+.+.. .|. +. ....++..+|+|++++..... .-.|+.+|.++.+|+++. .|+
T Consensus 228 ~~~~W~~~~~-~~~-~r--------~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~ 287 (302)
T 2xn4_A 228 TTNAWRQVAD-MNM-CR--------RNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMS 287 (302)
T ss_dssp TTTEEEEECC-CSS-CC--------BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCS
T ss_pred CCCCEeeCCC-CCC-cc--------ccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECCcccC
Confidence 9999987642 221 11 122356678999998775432 246888899999999986 564
No 13
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.93 E-value=1.6e-10 Score=76.02 Aligned_cols=42 Identities=36% Similarity=0.525 Sum_probs=37.1
Q ss_pred CCCCCCccHHHHHHHHhcCCcccceehhccccccccCccccC
Q 017173 33 LHDWSELPAELLELIMCHLTLEDNVHASVVCKKWHAPAISVR 74 (376)
Q Consensus 33 ~~~Ws~LP~dll~~Il~rLp~~~l~r~r~VCk~Wrs~~~~~~ 74 (376)
...|++||+|++.+||++||..++.+++.|||+|+.++.++.
T Consensus 6 ~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~ 47 (53)
T 1fs1_A 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (53)
T ss_dssp ---CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGG
T ss_pred CCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChH
Confidence 457899999999999999999999999999999999998754
No 14
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.91 E-value=5.7e-08 Score=88.59 Aligned_cols=185 Identities=11% Similarity=0.109 Sum_probs=119.5
Q ss_pred EEEEcCCCCceEEee-cCCCCCCeEEEecCCeEEEEeCC--------CCeEEEEcCCCcceecCCCccccee--EEEeec
Q 017173 92 YEFYDPAQRKTYSLE-LPELYGSRVCYTKDSWLLLYRPR--------THRVFFFNPFTRDMIKLPRFELTYQ--IVAFSC 160 (376)
Q Consensus 92 ~~~~~~~~~~~~~~~-lp~~~~~~~~~s~~G~ll~~~~~--------~~~~~l~NP~T~~~~~LP~~~~~~~--~~~l~~ 160 (376)
...||+.+++|..++ +|.......+...+|.|++..+. .+.+.++||.|++|..+++++.... .++. .
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~ 147 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-H 147 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-E
T ss_pred eEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-E
Confidence 456899999998763 44211122233447777776551 2469999999999999987765321 1222 1
Q ss_pred CCCCCCeEEEEEecc-C-C-CeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEeCCeEEEEccC------CeEEEEe
Q 017173 161 APTSSSCVVFTVKHI-S-P-TVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSLT------GWLGVFD 231 (376)
Q Consensus 161 ~p~~~~~~v~~i~~~-~-~-~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~~------~~i~~~D 231 (376)
+ + .++.+... . . ....++.|++.+++|+.+...+ .+ .....++.++|++|++... ..+.+||
T Consensus 148 ~----~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~---r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd 218 (315)
T 4asc_A 148 M----D-LVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQ-TA---RSLFGATVHDGRIIVAAGVTDTGLTSSAEVYS 218 (315)
T ss_dssp T----T-EEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCS-SC---CBSCEEEEETTEEEEEEEECSSSEEEEEEEEE
T ss_pred C----C-EEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCC-Cc---hhceEEEEECCEEEEEeccCCCCccceEEEEE
Confidence 1 1 23333221 1 1 1235889999999999887432 22 3455678889999998642 3689999
Q ss_pred CCCCCceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecC-----C------CcEEEEEecCCccEEEee
Q 017173 232 PVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCS-----E------NPIIFKLDQSKMAWEEMK 296 (376)
Q Consensus 232 ~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~-----~------~~~V~~ld~~~~~W~~v~ 296 (376)
+.++.|+.+.. .| .+. ....++..+|+|++++.... . .-.||.+|.++.+|+++.
T Consensus 219 ~~~~~W~~~~~-~p-~~r--------~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 284 (315)
T 4asc_A 219 ITDNKWAPFEA-FP-QER--------SSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL 284 (315)
T ss_dssp TTTTEEEEECC-CS-SCC--------BSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE
T ss_pred CCCCeEEECCC-CC-Ccc--------cceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc
Confidence 99999987642 22 121 22345667899999987532 1 136899999999999993
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.74 E-value=1.2e-06 Score=81.15 Aligned_cols=207 Identities=14% Similarity=0.198 Sum_probs=118.8
Q ss_pred EecCCeEEEEeCC-CCeEEEEcCCC--cceecCCCcc-cce--eEEEeecCCCCCCeEEEEEecc----CCC---eEEEE
Q 017173 117 YTKDSWLLLYRPR-THRVFFFNPFT--RDMIKLPRFE-LTY--QIVAFSCAPTSSSCVVFTVKHI----SPT---VVAIS 183 (376)
Q Consensus 117 ~s~~G~ll~~~~~-~~~~~l~NP~T--~~~~~LP~~~-~~~--~~~~l~~~p~~~~~~v~~i~~~----~~~---~~~~~ 183 (376)
...+|.|++..+. .+.+.++||.+ ++|..+|+++ ... ..++.. + + .++.+... ... ...+.
T Consensus 16 ~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~-~----~-~lyv~GG~~~~~~~~~~~~~~v~ 89 (357)
T 2uvk_A 16 AIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI-D----G-NLYVFGGIGKNSEGLTQVFNDVH 89 (357)
T ss_dssp EEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE-T----T-EEEEECCEEECTTSCEEECCCEE
T ss_pred EEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE-C----C-EEEEEcCCCCCCCccceeeccEE
Confidence 3447888777653 35799999984 8899998776 322 122221 1 1 22222211 100 12478
Q ss_pred EEecCCCCeeeeccCCCCCccccceeeeEEeCCeEEEEccC---------------------------------------
Q 017173 184 TCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSLT--------------------------------------- 224 (376)
Q Consensus 184 ~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~~--------------------------------------- 224 (376)
.|++.+++|+.+...+ |. ......++.++|++|++...
T Consensus 90 ~yd~~~~~W~~~~~~~--p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (357)
T 2uvk_A 90 KYNPKTNSWVKLMSHA--PM-GMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFF 166 (357)
T ss_dssp EEETTTTEEEECSCCC--SS-CCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCC
T ss_pred EEeCCCCcEEECCCCC--Cc-ccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCC
Confidence 9999999999887533 21 13344567799999998642
Q ss_pred -CeEEEEeCCCCCceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecCC---CcEEEEE--ecCCccEEEeecc
Q 017173 225 -GWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSE---NPIIFKL--DQSKMAWEEMKTL 298 (376)
Q Consensus 225 -~~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~---~~~V~~l--d~~~~~W~~v~~l 298 (376)
..+.+||+.++.|+.+.. .|. +.. ....++..+|+|++++..... .-.||.+ |.++.+|.++..+
T Consensus 167 ~~~v~~yd~~~~~W~~~~~-~p~-~~~-------~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~ 237 (357)
T 2uvk_A 167 NKFLLSFDPSTQQWSYAGE-SPW-YGT-------AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPV 237 (357)
T ss_dssp CCEEEEEETTTTEEEEEEE-CSS-CCC-------BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCS
T ss_pred cccEEEEeCCCCcEEECCC-CCC-CCc-------ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCC
Confidence 479999999999987642 221 111 113456678999998754321 2345554 4588999999887
Q ss_pred CCcEEEeeCCcccccCCCCccccCeEEEcccccC--------------------CceEEEEecCCceeecC
Q 017173 299 DGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFF--------------------GKRCISYSLNDSRYYPR 349 (376)
Q Consensus 299 g~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~~--------------------~~~~~vy~l~~~~~~~~ 349 (376)
+... +.. ..+ ....+|.||+.-.... ...+.+||+++++|+.+
T Consensus 238 ~~~~---~~~-~~~----~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~ 300 (357)
T 2uvk_A 238 SSPD---GVA-GGF----AGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKS 300 (357)
T ss_dssp STTT---CCB-SCE----EEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEE
T ss_pred CCCc---ccc-cce----EEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeC
Confidence 4210 000 000 0124677888754210 12467999999998865
No 16
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.63 E-value=3.7e-09 Score=94.36 Aligned_cols=48 Identities=25% Similarity=0.425 Sum_probs=40.5
Q ss_pred cccccCCCCCCccHHHHHHHHhcCCcccce-ehhccccccccCccccCC
Q 017173 28 EERLELHDWSELPAELLELIMCHLTLEDNV-HASVVCKKWHAPAISVRV 75 (376)
Q Consensus 28 ~~~~~~~~Ws~LP~dll~~Il~rLp~~~l~-r~r~VCk~Wrs~~~~~~~ 75 (376)
...|+......||+|||.+||++||..+|+ +|++|||+||+++.++.|
T Consensus 43 ~~~~~~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~ 91 (297)
T 2e31_A 43 EEAEAVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPL 91 (297)
T ss_dssp ----CCCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHH
T ss_pred CccccccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHH
Confidence 344556678899999999999999999999 999999999999998754
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.39 E-value=8e-06 Score=82.70 Aligned_cols=189 Identities=11% Similarity=-0.017 Sum_probs=116.7
Q ss_pred EEEEEcCCCCceEEeec-------CCCC-CCeEEEec-CCeEEEEeCC------CCeEEEEcCCCcceecCCCccccee-
Q 017173 91 LYEFYDPAQRKTYSLEL-------PELY-GSRVCYTK-DSWLLLYRPR------THRVFFFNPFTRDMIKLPRFELTYQ- 154 (376)
Q Consensus 91 ~~~~~~~~~~~~~~~~l-------p~~~-~~~~~~s~-~G~ll~~~~~------~~~~~l~NP~T~~~~~LP~~~~~~~- 154 (376)
....||+..++|..+++ |... ++..+... +|-|++.++. .+++.++||.|++|..+++++....
T Consensus 413 ~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~ 492 (695)
T 2zwa_A 413 EILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR 492 (695)
T ss_dssp CEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS
T ss_pred cEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc
Confidence 45678999999998872 3212 22232232 7878877652 2468999999999999987765322
Q ss_pred -EEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEeC---CeEEEEccC------
Q 017173 155 -IVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCN---GIFYCLSLT------ 224 (376)
Q Consensus 155 -~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~---G~~Y~l~~~------ 224 (376)
.++... .+. ++.+....... .+++|++.++.|+.+.....+|.. .....++.++ |++|+++..
T Consensus 493 h~~~~~~---~~~--iyv~GG~~~~~-~v~~yd~~t~~W~~~~~~g~~p~~-r~~~~a~v~~~~~~~iyv~GG~~~~~~~ 565 (695)
T 2zwa_A 493 HSACSLP---DGN--VLILGGVTEGP-AMLLYNVTEEIFKDVTPKDEFFQN-SLVSAGLEFDPVSKQGIILGGGFMDQTT 565 (695)
T ss_dssp CEEEECT---TSC--EEEECCBCSSC-SEEEEETTTTEEEECCCSSGGGGS-CCBSCEEEEETTTTEEEEECCBCTTSSC
T ss_pred ceEEEEc---CCE--EEEECCCCCCC-CEEEEECCCCceEEccCCCCCCCc-ccceeEEEEeCCCCEEEEECCcCCCCCe
Confidence 222211 122 22322222212 688999999999988753223311 2233445556 899998742
Q ss_pred --CeEEEEeCCCCC------ceeeeeCCCCCCcccccccccceeEEEEEC-CcEEEEEEecCC-----CcEEEEEecCCc
Q 017173 225 --GWLGVFDPVKRD------WGVLVVPPPKCPENFFAKNWWKGKFMVEHK-GDILVIYTCCSE-----NPIIFKLDQSKM 290 (376)
Q Consensus 225 --~~i~~~D~~~~~------~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~-G~LllV~~~~~~-----~~~V~~ld~~~~ 290 (376)
..+.+||+.++. |+.+.. .|..+. .....+..+ |.|++++..... .-.|+.+|.++.
T Consensus 566 ~~~~v~~yd~~~~~w~~~~~W~~~~~-~p~~~R--------~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 566 VSDKAIIFKYDAENATEPITVIKKLQ-HPLFQR--------YGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp BCCEEEEEEECTTCSSCCEEEEEEEE-CGGGCC--------BSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred eeCcEEEEEccCCccccceEEEEcCC-CCCCCc--------ccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 459999999998 665533 111111 122345566 999999875432 246888899999
Q ss_pred cEEEe
Q 017173 291 AWEEM 295 (376)
Q Consensus 291 ~W~~v 295 (376)
+|..+
T Consensus 637 ~W~~~ 641 (695)
T 2zwa_A 637 TLTSI 641 (695)
T ss_dssp EEEEC
T ss_pred eEEEe
Confidence 99954
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.37 E-value=1.2e-05 Score=81.41 Aligned_cols=206 Identities=4% Similarity=-0.059 Sum_probs=120.7
Q ss_pred cCCeEEEEeCC----CCeEEEEcCCCcceecCC-C-----cccc---eeEEEeecCCCCCCeEEEEEecc-CCC--eEEE
Q 017173 119 KDSWLLLYRPR----THRVFFFNPFTRDMIKLP-R-----FELT---YQIVAFSCAPTSSSCVVFTVKHI-SPT--VVAI 182 (376)
Q Consensus 119 ~~G~ll~~~~~----~~~~~l~NP~T~~~~~LP-~-----~~~~---~~~~~l~~~p~~~~~~v~~i~~~-~~~--~~~~ 182 (376)
.++.|++.++. .+.+.++||.|++|..++ + ++.. ...+++..+ + .++.+... ... ...+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~----~-~lyv~GG~~~~~~~~~dv 470 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRN----N-QLLLIGGRKAPHQGLSDN 470 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTT----T-EEEEECCBSSTTCBCCCC
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccC----C-EEEEEcCCCCCCCccccE
Confidence 56777776653 246999999999998876 4 2221 122233101 2 23333221 111 2357
Q ss_pred EEEecCCCCeeeeccCCCCCccccceeeeEEe-CCeEEEEccC---CeEEEEeCCCCCceeeeeCCCCCCcccccccccc
Q 017173 183 STCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NGIFYCLSLT---GWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWK 258 (376)
Q Consensus 183 ~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G~~Y~l~~~---~~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~ 258 (376)
.+|++.+++|+.+...+ .+ .....++.+ +|++|+++.. +.+.+||+.++.|+.+.... ..|.. . ..
T Consensus 471 ~~yd~~t~~W~~~~~~p-~~---R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g-~~p~~----r-~~ 540 (695)
T 2zwa_A 471 WIFDMKTREWSMIKSLS-HT---RFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKD-EFFQN----S-LV 540 (695)
T ss_dssp EEEETTTTEEEECCCCS-BC---CBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSS-GGGGS----C-CB
T ss_pred EEEeCCCCcEEECCCCC-CC---cccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCC-CCCCc----c-cc
Confidence 89999999999886432 22 334455664 9999999753 26999999999998764210 01110 0 01
Q ss_pred eeEEE-EEC-CcEEEEEEecCC----CcEEEEEecCCcc------EEEeeccCCcEEEeeCCcccccCCCCcccc-CeEE
Q 017173 259 GKFMV-EHK-GDILVIYTCCSE----NPIIFKLDQSKMA------WEEMKTLDGLTLFASFLSSQSRADLPGIMR-NSVY 325 (376)
Q Consensus 259 ~~~Lv-~~~-G~LllV~~~~~~----~~~V~~ld~~~~~------W~~v~~lg~~~lFlg~~~s~~~~~~~g~~~-n~Iy 325 (376)
...++ ..+ |.|++++..... .-.||.+|.++.+ |.++..++.. ++.. .++ ...+ |.||
T Consensus 541 ~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~----~R~~-~~~----~~~~~~~iy 611 (695)
T 2zwa_A 541 SAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLF----QRYG-SQI----KYITPRKLL 611 (695)
T ss_dssp SCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGG----CCBS-CEE----EEEETTEEE
T ss_pred eeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCC----Cccc-ceE----EEeCCCEEE
Confidence 11122 223 789998875432 2468888988887 8988874311 1100 000 1234 7888
Q ss_pred Eccccc------CCceEEEEecCCceeec
Q 017173 326 FSKVRF------FGKRCISYSLNDSRYYP 348 (376)
Q Consensus 326 f~~~~~------~~~~~~vy~l~~~~~~~ 348 (376)
+.-... ....+.+||+++++|..
T Consensus 612 v~GG~~~~~~~~~~~~v~~yd~~t~~W~~ 640 (695)
T 2zwa_A 612 IVGGTSPSGLFDRTNSIISLDPLSETLTS 640 (695)
T ss_dssp EECCBCSSCCCCTTTSEEEEETTTTEEEE
T ss_pred EECCccCCCCCCCCCeEEEEECCCCeEEE
Confidence 875421 13567899999999984
No 19
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.30 E-value=0.00022 Score=67.60 Aligned_cols=187 Identities=12% Similarity=0.061 Sum_probs=96.3
Q ss_pred CCCCCccHHHHHHHHhcCCcccceehhccccccccCccccCC---------CCCCceEEEEee-c---C-cEEE-EEc--
Q 017173 34 HDWSELPAELLELIMCHLTLEDNVHASVVCKKWHAPAISVRV---------VNQSPWLMYFPK-F---G-NLYE-FYD-- 96 (376)
Q Consensus 34 ~~Ws~LP~dll~~Il~rLp~~~l~r~r~VCk~Wrs~~~~~~~---------~~~~P~l~~~~~-~---~-~~~~-~~~-- 96 (376)
...+.||+||+..||+.|+..++.+++.|||.|+.++.+..+ ....++.-.... . . ..+. .|-
T Consensus 17 d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~~~ 96 (445)
T 2ovr_B 17 DFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQ 96 (445)
T ss_dssp STTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHHHH
T ss_pred ChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHhhh
Confidence 347899999999999999999999999999999999876421 001111000000 0 0 0000 000
Q ss_pred -CCCCceEE--e----ecCCCCCC--eEEEecCCeEEEEeCCCCeEEEEcCCCccee-cCCCcccceeEEEeecCCCCCC
Q 017173 97 -PAQRKTYS--L----ELPELYGS--RVCYTKDSWLLLYRPRTHRVFFFNPFTRDMI-KLPRFELTYQIVAFSCAPTSSS 166 (376)
Q Consensus 97 -~~~~~~~~--~----~lp~~~~~--~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~-~LP~~~~~~~~~~l~~~p~~~~ 166 (376)
.....|.. . .+....+. .++...+.+|+.... .+.+.++|..+++.+ .++........+.+. +.
T Consensus 97 ~~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~~-dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~-----~~ 170 (445)
T 2ovr_B 97 HRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSD-DNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-----DN 170 (445)
T ss_dssp HHHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEET-TSCEEEEETTTCCEEEECCCCSSCEEEEEEE-----TT
T ss_pred hhhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEEC-CCcEEEEECCCCcEEEEEcCCCCCEEEEEec-----CC
Confidence 00000000 0 01111111 223334556555544 458999999998754 343222222233333 23
Q ss_pred eEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEeCCeEEEEccCCeEEEEeCCCCC
Q 017173 167 CVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSLTGWLGVFDPVKRD 236 (376)
Q Consensus 167 ~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~~~~i~~~D~~~~~ 236 (376)
+++.+ . ..+ .+.+|+..++.-...-.. . ......+.+.++.+.....++.|.+||+.+..
T Consensus 171 ~l~s~-~-~dg---~i~vwd~~~~~~~~~~~~--h---~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~ 230 (445)
T 2ovr_B 171 IIISG-S-TDR---TLKVWNAETGECIHTLYG--H---TSTVRCMHLHEKRVVSGSRDATLRVWDIETGQ 230 (445)
T ss_dssp EEEEE-E-TTS---CEEEEETTTTEEEEEECC--C---SSCEEEEEEETTEEEEEETTSEEEEEESSSCC
T ss_pred EEEEE-e-CCC---eEEEEECCcCcEEEEECC--C---CCcEEEEEecCCEEEEEeCCCEEEEEECCCCc
Confidence 33332 2 111 466777765532211111 1 12344555556667777778999999998754
No 20
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.26 E-value=5.6e-06 Score=83.34 Aligned_cols=238 Identities=12% Similarity=0.061 Sum_probs=130.8
Q ss_pred EEEEEcCCCCceEEee-cCCCCCC---eEEEecCCeEEEEeCC-CCeEEEEcCCCcceecCCCcccce--eEEEeecCCC
Q 017173 91 LYEFYDPAQRKTYSLE-LPELYGS---RVCYTKDSWLLLYRPR-THRVFFFNPFTRDMIKLPRFELTY--QIVAFSCAPT 163 (376)
Q Consensus 91 ~~~~~~~~~~~~~~~~-lp~~~~~---~~~~s~~G~ll~~~~~-~~~~~l~NP~T~~~~~LP~~~~~~--~~~~l~~~p~ 163 (376)
....||+.+++|..+. +|..... ......+|-|++.... ...+.++||.|++|..+|+++... ..++...
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~--- 296 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMS--- 296 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECT---
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEec---
Confidence 3567999999997654 3321111 1223467888887763 347999999999999998876532 2222221
Q ss_pred CCCeEEEEEec-cCC--CeEEEEEEecCCCCeeeeccCC--CCCccccceeeeEEeCCeEEEEc----------cCCeEE
Q 017173 164 SSSCVVFTVKH-ISP--TVVAISTCHPGATEWVTDNYQN--RLPFVSSIWNKLVFCNGIFYCLS----------LTGWLG 228 (376)
Q Consensus 164 ~~~~~v~~i~~-~~~--~~~~~~~y~~~~~~W~~~~~~~--~~p~~~~~~~~~v~~~G~~Y~l~----------~~~~i~ 228 (376)
.+. ++.+.. ..+ ....+++|++.+++|+.++... .++. .....++..++.+|++. ....+.
T Consensus 297 dg~--iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~--~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~ 372 (656)
T 1k3i_A 297 DGR--VFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLT--ADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMN 372 (656)
T ss_dssp TSC--EEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCC--CCTTGGGTTTCSCCEEECGGGCEEECCSSSEEE
T ss_pred CCe--EEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccc--ccccceeecCCceEEEECCCCcEEEecCcccee
Confidence 112 333322 111 1235789999999999875321 1221 11122334566666654 245688
Q ss_pred EEeCCCCCceeeeeCCCC----CCcccccccccceeEEE--EECCcEEEEEEecC-------CC-cEEEEEecCCccEEE
Q 017173 229 VFDPVKRDWGVLVVPPPK----CPENFFAKNWWKGKFMV--EHKGDILVIYTCCS-------EN-PIIFKLDQSKMAWEE 294 (376)
Q Consensus 229 ~~D~~~~~~~~~~~p~p~----~~~~~~~~~~~~~~~Lv--~~~G~LllV~~~~~-------~~-~~V~~ld~~~~~W~~ 294 (376)
.||+.++.|.......+. .+.. .....++ ..+|+|++++.... .. ..|+..|.++.+|.+
T Consensus 373 ~yd~~~~~w~~~~~~~~~~~~~~~~~------~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 446 (656)
T 1k3i_A 373 WYYTSGSGDVKSAGKRQSNRGVAPDA------MCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTV 446 (656)
T ss_dssp EEECSTTCEEEEEEECEETTEECCCC------BTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEE
T ss_pred eeecCCcceeecCCccccccccCCCC------CCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeE
Confidence 999999887533221111 0000 0111111 24788988876432 11 257777889999999
Q ss_pred ee--ccCCcEEEeeCCcccccCCCCccccCeEEEccccc---------CCceEEEEecCCceeecCC
Q 017173 295 MK--TLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRF---------FGKRCISYSLNDSRYYPRK 350 (376)
Q Consensus 295 v~--~lg~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~---------~~~~~~vy~l~~~~~~~~~ 350 (376)
+. .|+..-.+ .++ .-+.++.||+..... ....+.+||.++++|+...
T Consensus 447 ~~~~~mp~~R~~----~~~-----~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~ 504 (656)
T 1k3i_A 447 FASNGLYFARTF----HTS-----VVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN 504 (656)
T ss_dssp ECTTCCSSCCBS----CEE-----EECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECC
T ss_pred EccCCCCCCccc----CCe-----EECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecC
Confidence 86 55431100 000 011245666654311 1234678998888887543
No 21
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.16 E-value=0.0012 Score=62.61 Aligned_cols=38 Identities=24% Similarity=0.289 Sum_probs=35.3
Q ss_pred CCCCccHHHHHHHHhcCCcccceehhccccccccCccc
Q 017173 35 DWSELPAELLELIMCHLTLEDNVHASVVCKKWHAPAIS 72 (376)
Q Consensus 35 ~Ws~LP~dll~~Il~rLp~~~l~r~r~VCk~Wrs~~~~ 72 (376)
.++.||+||+.+||+.|+.++|++++.|||.|+.++.+
T Consensus 14 ~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~ 51 (464)
T 3v7d_B 14 LITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRK 51 (464)
T ss_dssp HHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTT
T ss_pred ChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcC
Confidence 35789999999999999999999999999999998865
No 22
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.14 E-value=0.00091 Score=63.18 Aligned_cols=37 Identities=30% Similarity=0.490 Sum_probs=33.8
Q ss_pred CCCccHH----HHHHHHhcCCcccceehhccccccccCccc
Q 017173 36 WSELPAE----LLELIMCHLTLEDNVHASVVCKKWHAPAIS 72 (376)
Q Consensus 36 Ws~LP~d----ll~~Il~rLp~~~l~r~r~VCk~Wrs~~~~ 72 (376)
.+.||+| |+..||+.|+..+|.+++.|||+|+.++.+
T Consensus 11 ~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~ 51 (435)
T 1p22_A 11 ITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSD 51 (435)
T ss_dssp HHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcC
Confidence 4679999 999999999999999999999999987754
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.00 E-value=8e-05 Score=74.85 Aligned_cols=137 Identities=10% Similarity=0.159 Sum_probs=86.5
Q ss_pred EEEEcCCCCceEEe-ecCCCCCCeEEEec-CCeEEEEeCC-----------CCeEEEEcCCCcceecCCCcccc---ee-
Q 017173 92 YEFYDPAQRKTYSL-ELPELYGSRVCYTK-DSWLLLYRPR-----------THRVFFFNPFTRDMIKLPRFELT---YQ- 154 (376)
Q Consensus 92 ~~~~~~~~~~~~~~-~lp~~~~~~~~~s~-~G~ll~~~~~-----------~~~~~l~NP~T~~~~~LP~~~~~---~~- 154 (376)
+..|||..++|..+ ++|... ....... +|-|++.... ...+.++||.|++|..+++++.. +.
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~~-~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~ 246 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIVP-AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCP 246 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSCC-SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSC
T ss_pred cccCCCCCCeeeeeccCCCCc-eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccc
Confidence 34568888999864 466532 2333333 7777776431 12578999999999998776432 21
Q ss_pred EEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEe-CCeEEEEccC-------Ce
Q 017173 155 IVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NGIFYCLSLT-------GW 226 (376)
Q Consensus 155 ~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G~~Y~l~~~-------~~ 226 (376)
.+++..+ . .++.+...... .+.+|++.+++|+.+.. ++. ......++.+ +|++|++... ..
T Consensus 247 ~~~~~~~----g-~lyv~GG~~~~--~v~~yd~~t~~W~~~~~---~~~-~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~ 315 (656)
T 1k3i_A 247 GISMDGN----G-QIVVTGGNDAK--KTSLYDSSSDSWIPGPD---MQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKN 315 (656)
T ss_dssp EEEECTT----S-CEEEECSSSTT--CEEEEEGGGTEEEECCC---CSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCC
T ss_pred cccCCCC----C-CEEEeCCCCCC--ceEEecCcCCceeECCC---CCc-cccccceEEecCCeEEEEeCcccCCccccc
Confidence 1222211 1 23333322222 57899999999998764 321 1334556777 9999999762 45
Q ss_pred EEEEeCCCCCceee
Q 017173 227 LGVFDPVKRDWGVL 240 (376)
Q Consensus 227 i~~~D~~~~~~~~~ 240 (376)
+.+||+.++.|+.+
T Consensus 316 ~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 316 GEVYSPSSKTWTSL 329 (656)
T ss_dssp EEEEETTTTEEEEE
T ss_pred ceEeCCCCCcceeC
Confidence 89999999999875
No 24
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.56 E-value=1.4e-05 Score=73.20 Aligned_cols=42 Identities=36% Similarity=0.523 Sum_probs=37.7
Q ss_pred cCCCCCCccHHHHHHHHhcCCcccceehhccccccccCcccc
Q 017173 32 ELHDWSELPAELLELIMCHLTLEDNVHASVVCKKWHAPAISV 73 (376)
Q Consensus 32 ~~~~Ws~LP~dll~~Il~rLp~~~l~r~r~VCk~Wrs~~~~~ 73 (376)
+...|++||+|++.+|+.+|+..++.+++.|||+|+.++.++
T Consensus 5 ~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~ 46 (336)
T 2ast_B 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDE 46 (336)
T ss_dssp --CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCS
T ss_pred ccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCc
Confidence 356899999999999999999999999999999999998654
No 25
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.49 E-value=7.4e-06 Score=72.35 Aligned_cols=41 Identities=15% Similarity=0.242 Sum_probs=37.9
Q ss_pred CCCCCccHHHHHHHHhcCCcccceehhccccccccCccccC
Q 017173 34 HDWSELPAELLELIMCHLTLEDNVHASVVCKKWHAPAISVR 74 (376)
Q Consensus 34 ~~Ws~LP~dll~~Il~rLp~~~l~r~r~VCk~Wrs~~~~~~ 74 (376)
..+++||.|++..||+.|+.+|++++..|||.||.++.++.
T Consensus 3 ~~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~ 43 (312)
T 3l2o_B 3 STLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPI 43 (312)
T ss_dssp CHHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHH
T ss_pred chhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccch
Confidence 45778999999999999999999999999999999999863
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.20 E-value=5e-05 Score=75.08 Aligned_cols=39 Identities=26% Similarity=0.457 Sum_probs=29.2
Q ss_pred ccCCCCCCccHHHHHHHHhcCC-cccceehhccccccccC
Q 017173 31 LELHDWSELPAELLELIMCHLT-LEDNVHASVVCKKWHAP 69 (376)
Q Consensus 31 ~~~~~Ws~LP~dll~~Il~rLp-~~~l~r~r~VCk~Wrs~ 69 (376)
|+...|++||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 1 ~~~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 1 MQKRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ---------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred CcccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 4567899999999999999999 89999999999999987
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=95.41 E-value=0.0021 Score=63.39 Aligned_cols=34 Identities=24% Similarity=0.498 Sum_probs=31.6
Q ss_pred CCccHHHHHHHHhcC-CcccceehhccccccccCc
Q 017173 37 SELPAELLELIMCHL-TLEDNVHASVVCKKWHAPA 70 (376)
Q Consensus 37 s~LP~dll~~Il~rL-p~~~l~r~r~VCk~Wrs~~ 70 (376)
++||+|++..|+++| +.+++.+++.|||+|+.+.
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~ 48 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKID 48 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhh
Confidence 689999999999999 7899999999999998774
No 28
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.19 E-value=1.6 Score=38.92 Aligned_cols=221 Identities=13% Similarity=0.149 Sum_probs=117.3
Q ss_pred cEEEEEcCCCCceEE-eec---C-CCCC-CeEEEecCCeEEEEeCCCCeEEEEcCCCccee-cCCCcccceeEEEeecCC
Q 017173 90 NLYEFYDPAQRKTYS-LEL---P-ELYG-SRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMI-KLPRFELTYQIVAFSCAP 162 (376)
Q Consensus 90 ~~~~~~~~~~~~~~~-~~l---p-~~~~-~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~-~LP~~~~~~~~~~l~~~p 162 (376)
....++|+.+++... +.. + .+.. -+-+.-.++.+++.....+.+.++|+.|++.+ .+|....+ ..++++.+
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p-~~i~~~~~- 94 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSP-RYIHFLSD- 94 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSE-EEEEEEET-
T ss_pred ceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCC-cEEEEeCC-
Confidence 467889999877543 100 0 0111 11223346777777665568999999999863 35433222 23555332
Q ss_pred CCCCeEEEEEeccCCCeEEEEEEecCCCCee-eeccCCCCCccccceeeeEEeCCeEEEEcc--CCeEEEEeCCCCCce-
Q 017173 163 TSSSCVVFTVKHISPTVVAISTCHPGATEWV-TDNYQNRLPFVSSIWNKLVFCNGIFYCLSL--TGWLGVFDPVKRDWG- 238 (376)
Q Consensus 163 ~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~-~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~--~~~i~~~D~~~~~~~- 238 (376)
. .++..+... ..+.+++..+++-. .++...... .......+++.+|.+|+... .+.|.++|+.+....
T Consensus 95 ---g-~lyv~~~~~---~~v~~iD~~t~~~~~~i~~g~~~~-~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~ 166 (328)
T 3dsm_A 95 ---E-KAYVTQIWD---YRIFIINPKTYEITGYIECPDMDM-ESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVD 166 (328)
T ss_dssp ---T-EEEEEEBSC---SEEEEEETTTTEEEEEEECTTCCT-TTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEE
T ss_pred ---C-eEEEEECCC---CeEEEEECCCCeEEEEEEcCCccc-cCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEE
Confidence 2 344433222 15677888776432 222111000 00123455667889999874 678999999986542
Q ss_pred eeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecCC-------CcEEEEEecCCccEEEeeccCC--cEEEeeCCc
Q 017173 239 VLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSE-------NPIIFKLDQSKMAWEEMKTLDG--LTLFASFLS 309 (376)
Q Consensus 239 ~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~-------~~~V~~ld~~~~~W~~v~~lg~--~~lFlg~~~ 309 (376)
.+.. ...|.. ..+..+|+++++...... .-.|+++|.++.+..+.-.++. ..--+
T Consensus 167 ~i~~--g~~p~~----------i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~l---- 230 (328)
T 3dsm_A 167 ELTI--GIQPTS----------LVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEV---- 230 (328)
T ss_dssp EEEC--SSCBCC----------CEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEE----
T ss_pred EEEc--CCCccc----------eEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeE----
Confidence 2221 112221 123345887766543211 2578888988776554434421 11101
Q ss_pred ccccCCCCccccCeEEEcccccCCceEEEEecCCceee
Q 017173 310 SQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRYY 347 (376)
Q Consensus 310 s~~~~~~~g~~~n~Iyf~~~~~~~~~~~vy~l~~~~~~ 347 (376)
... . .++.+|+.+. .+.+||.+++++.
T Consensus 231 --a~~---~-d~~~lyv~~~-----~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 231 --QLN---G-TRDTLYWINN-----DIWRMPVEADRVP 257 (328)
T ss_dssp --EEC---T-TSCEEEEESS-----SEEEEETTCSSCC
T ss_pred --EEe---c-CCCEEEEEcc-----EEEEEECCCCcee
Confidence 000 1 3677888753 5778888887653
No 29
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=93.93 E-value=3.5 Score=37.19 Aligned_cols=143 Identities=14% Similarity=0.087 Sum_probs=73.6
Q ss_pred eEEEEeecCcEEEEEcCCCCceEE-eecCCCCCCeEEEecCC-eEEEEeCCCCeEEEEcCCCcceecCCCcccceeEEEe
Q 017173 81 WLMYFPKFGNLYEFYDPAQRKTYS-LELPELYGSRVCYTKDS-WLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAF 158 (376)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~-~~lp~~~~~~~~~s~~G-~ll~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~l 158 (376)
.++.....+....++|+..++... +.... ....+..+.+| .|++.....+.+.++|+.|++.+..-........+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~ 81 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAV 81 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEE
Confidence 344444444667888888776543 33221 11222335555 4555544445899999999886542222222233444
Q ss_pred ecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEe-CCe-EEEEc-cCCeEEEEeCCCC
Q 017173 159 SCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NGI-FYCLS-LTGWLGVFDPVKR 235 (376)
Q Consensus 159 ~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G~-~Y~l~-~~~~i~~~D~~~~ 235 (376)
+ |. +.++++. ....+ .+.+++..+++-...-... .....+.+. +|. +|+.. .++.|.+||+.+.
T Consensus 82 s--pd-g~~l~~~-~~~~~---~v~v~d~~~~~~~~~~~~~------~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 148 (391)
T 1l0q_A 82 S--PD-GKQVYVT-NMASS---TLSVIDTTSNTVAGTVKTG------KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTK 148 (391)
T ss_dssp C--TT-SSEEEEE-ETTTT---EEEEEETTTTEEEEEEECS------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred C--CC-CCEEEEE-ECCCC---EEEEEECCCCeEEEEEeCC------CCcceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 4 32 2333333 22211 5778888766443221111 123344443 454 65544 4788999999876
Q ss_pred Cc
Q 017173 236 DW 237 (376)
Q Consensus 236 ~~ 237 (376)
..
T Consensus 149 ~~ 150 (391)
T 1l0q_A 149 AV 150 (391)
T ss_dssp EE
T ss_pred cE
Confidence 43
No 30
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=93.92 E-value=3.3 Score=36.89 Aligned_cols=131 Identities=13% Similarity=0.017 Sum_probs=71.2
Q ss_pred cEEEEEcCCCCce-EEeecCCCCCCeEEEecCCeEEEEeCCCCeEEEEcCCCccee---cCCCcc----cceeEEEeecC
Q 017173 90 NLYEFYDPAQRKT-YSLELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMI---KLPRFE----LTYQIVAFSCA 161 (376)
Q Consensus 90 ~~~~~~~~~~~~~-~~~~lp~~~~~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~---~LP~~~----~~~~~~~l~~~ 161 (376)
+...++|+.+.+. .+++... ....+..+.+|.+++.....+.+.++|+.|++.. .++... .+ ..+++.
T Consensus 64 ~~v~viD~~t~~~~~~i~~~~-~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p-~~i~~~-- 139 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITGFT-SPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGST-EQMVQY-- 139 (328)
T ss_dssp TEEEEEETTTCCEEEEEECCS-SEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBC-CCEEEE--
T ss_pred CEEEEEECcccEEEEEcCCCC-CCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCc-ceEEEE--
Confidence 4567788887765 3443211 1123334567888877744458999999998754 333310 11 123331
Q ss_pred CCCCCeEEEEEeccCCCeEEEEEEecCCCCeee-eccCCCCCccccceeeeEEe-CCeEEEEccC-----------CeEE
Q 017173 162 PTSSSCVVFTVKHISPTVVAISTCHPGATEWVT-DNYQNRLPFVSSIWNKLVFC-NGIFYCLSLT-----------GWLG 228 (376)
Q Consensus 162 p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~-~~~~~~~p~~~~~~~~~v~~-~G~~Y~l~~~-----------~~i~ 228 (376)
+.. ++..+.... ..+.+++..+++... +... .. ..++++- +|++|+.+.. +.|.
T Consensus 140 ---~~~-lyv~~~~~~--~~v~viD~~t~~~~~~i~~g-~~------p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~ 206 (328)
T 3dsm_A 140 ---GKY-VYVNCWSYQ--NRILKIDTETDKVVDELTIG-IQ------PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLY 206 (328)
T ss_dssp ---TTE-EEEEECTTC--CEEEEEETTTTEEEEEEECS-SC------BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEE
T ss_pred ---CCE-EEEEcCCCC--CEEEEEECCCCeEEEEEEcC-CC------ccceEEcCCCCEEEEECCCccCCccccCCceEE
Confidence 222 222232111 257788887765432 2211 11 1233332 6899888753 5799
Q ss_pred EEeCCCCCc
Q 017173 229 VFDPVKRDW 237 (376)
Q Consensus 229 ~~D~~~~~~ 237 (376)
++|+.+...
T Consensus 207 ~id~~t~~v 215 (328)
T 3dsm_A 207 RIDAETFTV 215 (328)
T ss_dssp EEETTTTEE
T ss_pred EEECCCCeE
Confidence 999987654
No 31
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=92.07 E-value=7.3 Score=35.90 Aligned_cols=200 Identities=13% Similarity=0.028 Sum_probs=101.6
Q ss_pred ecCC-eEEEEeCC--CCeEEEEcCCCcceecCCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeee
Q 017173 118 TKDS-WLLLYRPR--THRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVT 194 (376)
Q Consensus 118 s~~G-~ll~~~~~--~~~~~l~NP~T~~~~~LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~ 194 (376)
+.+| .|+....+ ...++++|.-|++...+.........++++ |. +.++++.... . +...+.+++..++....
T Consensus 187 Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~s--pd-g~~la~~~~~-~-g~~~i~~~d~~~~~~~~ 261 (415)
T 2hqs_A 187 SPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFS--PD-GSKLAFALSK-T-GSLNLYVMDLASGQIRQ 261 (415)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEEC--TT-SSEEEEEECT-T-SSCEEEEEETTTCCEEE
T ss_pred cCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEc--CC-CCEEEEEEec-C-CCceEEEEECCCCCEEe
Confidence 5555 34444332 237999999999876654333223334444 32 3444433322 1 12357788887766544
Q ss_pred eccCCCCCccccceeeeEEe-CCe-EEEEcc-CC--eEEEEeCCCCCceeeeeCCCCCCcccccccccceeEEEEECCcE
Q 017173 195 DNYQNRLPFVSSIWNKLVFC-NGI-FYCLSL-TG--WLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDI 269 (376)
Q Consensus 195 ~~~~~~~p~~~~~~~~~v~~-~G~-~Y~l~~-~~--~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~L 269 (376)
+.... .....+.+. +|+ +++... .+ .|..+|+.+.....+. .. ... .......-+|+.
T Consensus 262 l~~~~------~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~--~~--~~~-------~~~~~~spdG~~ 324 (415)
T 2hqs_A 262 VTDGR------SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRIT--WE--GSQ-------NQDADVSSDGKF 324 (415)
T ss_dssp CCCCS------SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECC--CS--SSE-------EEEEEECTTSSE
T ss_pred CcCCC------CcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEe--cC--CCc-------ccCeEECCCCCE
Confidence 33211 123333333 665 555543 23 6888898876432221 10 100 011112235777
Q ss_pred EEEEEecCCCcEEEEEecCCccEEEeeccCCcEEEeeCCcccccCCCCccccCeEEEcccccCCceEEEEecCCceeecC
Q 017173 270 LVIYTCCSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRYYPR 349 (376)
Q Consensus 270 llV~~~~~~~~~V~~ld~~~~~W~~v~~lg~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~~~~~~~vy~l~~~~~~~~ 349 (376)
+++.........|+.+|.++.+...+..-. ... ++... + .++.|++.........+.+++++.+....+
T Consensus 325 l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~-~~~------~~~~s--p--dg~~l~~~s~~~~~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 325 MVMVSSNGGQQHIAKQDLATGGVQVLSSTF-LDE------TPSLA--P--NGTMVIYSSSQGMGSVLNLVSTDGRFKARL 393 (415)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEECCCSS-SCE------EEEEC--T--TSSEEEEEEEETTEEEEEEEETTSCCEEEC
T ss_pred EEEEECcCCceEEEEEECCCCCEEEecCCC-CcC------CeEEc--C--CCCEEEEEEcCCCccEEEEEECCCCcEEEe
Confidence 666655545677888888776665443221 110 11100 1 356677776532233677888887665554
Q ss_pred C
Q 017173 350 K 350 (376)
Q Consensus 350 ~ 350 (376)
.
T Consensus 394 ~ 394 (415)
T 2hqs_A 394 P 394 (415)
T ss_dssp C
T ss_pred e
Confidence 3
No 32
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=89.82 E-value=9.5 Score=33.23 Aligned_cols=231 Identities=6% Similarity=-0.021 Sum_probs=108.7
Q ss_pred ceEEEEeecCcEEEEEcCCCCceEE-eecCCCCCCeEEEecCC-eEEEEeCCCCeEEEEcCCCcce-ec-CCCcccceeE
Q 017173 80 PWLMYFPKFGNLYEFYDPAQRKTYS-LELPELYGSRVCYTKDS-WLLLYRPRTHRVFFFNPFTRDM-IK-LPRFELTYQI 155 (376)
Q Consensus 80 P~l~~~~~~~~~~~~~~~~~~~~~~-~~lp~~~~~~~~~s~~G-~ll~~~~~~~~~~l~NP~T~~~-~~-LP~~~~~~~~ 155 (376)
..++.....++...++|+.+++... +..+.-.. .+..+.+| .|+........+.++|+.+++. .. ++........
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMAD 88 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCC
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccc
Confidence 3444433344567888988776543 34432112 33345555 4666665456899999999875 22 2211111111
Q ss_pred EEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEe-CCe-EEEEcc-CCe-EEEEe
Q 017173 156 VAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NGI-FYCLSL-TGW-LGVFD 231 (376)
Q Consensus 156 ~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G~-~Y~l~~-~~~-i~~~D 231 (376)
++++.+ +.+++ + ....++...+.+++..++.-...-... .....+++. +|+ +|+... .+. |.+||
T Consensus 89 ~~~s~d---g~~l~-~-~~~~~~~~~i~v~d~~~~~~~~~~~~~------~~~~~~~~spdg~~l~~~~~~~~~~i~~~~ 157 (331)
T 3u4y_A 89 VDITPD---DQFAV-T-VTGLNHPFNMQSYSFLKNKFISTIPIP------YDAVGIAISPNGNGLILIDRSSANTVRRFK 157 (331)
T ss_dssp EEECTT---SSEEE-E-CCCSSSSCEEEEEETTTTEEEEEEECC------TTEEEEEECTTSSCEEEEEETTTTEEEEEE
T ss_pred eEECCC---CCEEE-E-ecCCCCcccEEEEECCCCCeEEEEECC------CCccceEECCCCCEEEEEecCCCceEEEEE
Confidence 444321 23333 2 222211125677887766443221111 112334433 564 777655 366 88998
Q ss_pred CCCCCc-eee---eeCCCCCCcccccccccceeEE-EEECCcEEEEEEecCCCcEEEEEecCCccE-EEeeccCCcEEEe
Q 017173 232 PVKRDW-GVL---VVPPPKCPENFFAKNWWKGKFM-VEHKGDILVIYTCCSENPIIFKLDQSKMAW-EEMKTLDGLTLFA 305 (376)
Q Consensus 232 ~~~~~~-~~~---~~p~p~~~~~~~~~~~~~~~~L-v~~~G~LllV~~~~~~~~~V~~ld~~~~~W-~~v~~lg~~~lFl 305 (376)
++.+.- ... ..+... ....+ +.-+|+.+++.......+.||. .++.+. .++..++.
T Consensus 158 ~~~~g~~~~~~~~~~~~~~-----------~~~~~~~spdg~~l~v~~~~~~~v~v~d--~~~~~~~~~~~~~~~----- 219 (331)
T 3u4y_A 158 IDADGVLFDTGQEFISGGT-----------RPFNITFTPDGNFAFVANLIGNSIGILE--TQNPENITLLNAVGT----- 219 (331)
T ss_dssp ECTTCCEEEEEEEEECSSS-----------SEEEEEECTTSSEEEEEETTTTEEEEEE--CSSTTSCEEEEEEEC-----
T ss_pred ECCCCcEeecCCccccCCC-----------CccceEECCCCCEEEEEeCCCCeEEEEE--CCCCcccceeeeccC-----
Confidence 875321 100 111100 11122 2235775555544445566664 444332 11222211
Q ss_pred eCC-cccccCCCCccccCeEEEcccccCCceEEEEecCCcee
Q 017173 306 SFL-SSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRY 346 (376)
Q Consensus 306 g~~-~s~~~~~~~g~~~n~Iyf~~~~~~~~~~~vy~l~~~~~ 346 (376)
+.. ..+.. .-.++.+|+... ..+.+.+|++++++.
T Consensus 220 ~~~~~~~~~----spdg~~l~v~~~--~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 220 NNLPGTIVV----SRDGSTVYVLTE--STVDVFNFNQLSGTL 255 (331)
T ss_dssp SSCCCCEEE----CTTSSEEEEECS--SEEEEEEEETTTTEE
T ss_pred CCCCceEEE----CCCCCEEEEEEc--CCCEEEEEECCCCce
Confidence 110 01111 013566887764 345677899888876
No 33
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=89.47 E-value=10 Score=33.05 Aligned_cols=237 Identities=11% Similarity=0.099 Sum_probs=106.5
Q ss_pred cEEEEEcCCCCce--EEeecCCCCCCeEEEecCCeEEEEeCCC-C--eEEEEcCCCcceecCCCcccceeEEEeecCCCC
Q 017173 90 NLYEFYDPAQRKT--YSLELPELYGSRVCYTKDSWLLLYRPRT-H--RVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTS 164 (376)
Q Consensus 90 ~~~~~~~~~~~~~--~~~~lp~~~~~~~~~s~~G~ll~~~~~~-~--~~~l~NP~T~~~~~LP~~~~~~~~~~l~~~p~~ 164 (376)
.....+|+.+++. ..+....-+...+..+.+|-.+...... + .+.++|+-+++.+..-+.......++++ |.
T Consensus 62 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s--pd- 138 (331)
T 3u4y_A 62 QTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAIS--PN- 138 (331)
T ss_dssp CEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEEC--TT-
T ss_pred CeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEEC--CC-
Confidence 4566778877664 2233322222224445555433343333 3 7999999998765421111122334444 32
Q ss_pred CCeEEEEEeccCCCeEEEEEEecCC-CCeeeeccCCCCCccccceeeeEEe-CCe-EEEEcc-CCeEEEEeCCCCCc-ee
Q 017173 165 SSCVVFTVKHISPTVVAISTCHPGA-TEWVTDNYQNRLPFVSSIWNKLVFC-NGI-FYCLSL-TGWLGVFDPVKRDW-GV 239 (376)
Q Consensus 165 ~~~~v~~i~~~~~~~~~~~~y~~~~-~~W~~~~~~~~~p~~~~~~~~~v~~-~G~-~Y~l~~-~~~i~~~D~~~~~~-~~ 239 (376)
+.++++. ....+. .+.+|+... +.-..... ..++. ......+.+. +|+ +|+... .+.|.+||+.+... ..
T Consensus 139 g~~l~~~-~~~~~~--~i~~~~~~~~g~~~~~~~-~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~ 213 (331)
T 3u4y_A 139 GNGLILI-DRSSAN--TVRRFKIDADGVLFDTGQ-EFISG-GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITL 213 (331)
T ss_dssp SSCEEEE-EETTTT--EEEEEEECTTCCEEEEEE-EEECS-SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEE
T ss_pred CCEEEEE-ecCCCc--eEEEEEECCCCcEeecCC-ccccC-CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccce
Confidence 2333322 222221 144454332 11111100 00010 0122333333 675 777654 67899999987653 11
Q ss_pred e-eeCCCCCCcccccccccceeEEEEECCcEEEEEEecCCCcEEEEEecCCccEEEeeccCCcEEEeeCCcccccCCC-C
Q 017173 240 L-VVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADL-P 317 (376)
Q Consensus 240 ~-~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~~~~V~~ld~~~~~W~~v~~lg~~~lFlg~~~s~~~~~~-~ 317 (376)
+ ..+....+.. ..+.-+|+.+++...... .|+.+|.++.+...+..+..... +.......+... .
T Consensus 214 ~~~~~~~~~~~~----------~~~spdg~~l~v~~~~~~--~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 280 (331)
T 3u4y_A 214 LNAVGTNNLPGT----------IVVSRDGSTVYVLTESTV--DVFNFNQLSGTLSFVKSFGHGLL-IDPRPLFGANQMAL 280 (331)
T ss_dssp EEEEECSSCCCC----------EEECTTSSEEEEECSSEE--EEEEEETTTTEEEEEEEEECCCC-CCCGGGTTCCCEEE
T ss_pred eeeccCCCCCce----------EEECCCCCEEEEEEcCCC--EEEEEECCCCceeeecccccccc-cCCCCcccccceEE
Confidence 1 1221111111 123335665444332222 35556777776666654433211 111100100000 0
Q ss_pred ccccCeEEEcccccCCceEEEEecCCceeecC
Q 017173 318 GIMRNSVYFSKVRFFGKRCISYSLNDSRYYPR 349 (376)
Q Consensus 318 g~~~n~Iyf~~~~~~~~~~~vy~l~~~~~~~~ 349 (376)
.-.+..+|+... ..+.+.+|+++++.....
T Consensus 281 spdg~~l~v~~~--~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 281 NKTETKLFISAN--ISRELKVFTISGKVVGYV 310 (331)
T ss_dssp CTTSSEEEEEET--TTTEEEEEETTSCEEEEC
T ss_pred CCCCCEEEEecC--CCCcEEEEEecCCcccce
Confidence 114567888875 456788999998775543
No 34
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=87.64 E-value=14 Score=32.36 Aligned_cols=221 Identities=10% Similarity=-0.029 Sum_probs=105.3
Q ss_pred EEEEEcCCCCce-EEeecCCCCCCeEEEec-CCeEEEEeCCCCeEEEEcCCCccee---cCCCccc-------ceeEEEe
Q 017173 91 LYEFYDPAQRKT-YSLELPELYGSRVCYTK-DSWLLLYRPRTHRVFFFNPFTRDMI---KLPRFEL-------TYQIVAF 158 (376)
Q Consensus 91 ~~~~~~~~~~~~-~~~~lp~~~~~~~~~s~-~G~ll~~~~~~~~~~l~NP~T~~~~---~LP~~~~-------~~~~~~l 158 (376)
....+|+.+.+. ..++.+..+ ..+..+. +..+++.....+.+.++|+-|++.+ .++.... ....+++
T Consensus 70 ~v~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (353)
T 3vgz_A 70 VVYRLDPVTLEVTQAIHNDLKP-FGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVA 148 (353)
T ss_dssp EEEEECTTTCCEEEEEEESSCC-CSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEE
T ss_pred cEEEEcCCCCeEEEEEecCCCc-ceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEE
Confidence 456678776654 334443322 2333344 4456666665568999999998753 2322111 0123444
Q ss_pred ecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeee-eccCCCCCccccceeeeEEe-CC-eEEEEccCCeEEEEeCCCC
Q 017173 159 SCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVT-DNYQNRLPFVSSIWNKLVFC-NG-IFYCLSLTGWLGVFDPVKR 235 (376)
Q Consensus 159 ~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~-~~~~~~~p~~~~~~~~~v~~-~G-~~Y~l~~~~~i~~~D~~~~ 235 (376)
+.+ +.++++. ..... ..+.+++..+++=.. +.... .....+.+. +| .+|+...++.|.+||+.+.
T Consensus 149 s~d---g~~l~~~-~~~~~--~~i~~~d~~~~~~~~~~~~~~------~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~ 216 (353)
T 3vgz_A 149 DDA---TNTVYIS-GIGKE--SVIWVVDGGNIKLKTAIQNTG------KMSTGLALDSEGKRLYTTNADGELITIDTADN 216 (353)
T ss_dssp ETT---TTEEEEE-EESSS--CEEEEEETTTTEEEEEECCCC------TTCCCCEEETTTTEEEEECTTSEEEEEETTTT
T ss_pred CCC---CCEEEEE-ecCCC--ceEEEEcCCCCceEEEecCCC------CccceEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 432 2333322 21111 256777776553221 11011 112233333 45 5777777889999999876
Q ss_pred Cce-eeeeCCCCCCcccccccccceeEE-EEECCcEEEEEEecCCCcEEEEEecCCccEEEeeccCCcEEEeeCCccccc
Q 017173 236 DWG-VLVVPPPKCPENFFAKNWWKGKFM-VEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSR 313 (376)
Q Consensus 236 ~~~-~~~~p~p~~~~~~~~~~~~~~~~L-v~~~G~LllV~~~~~~~~~V~~ld~~~~~W~~v~~lg~~~lFlg~~~s~~~ 313 (376)
... .+.... ..+.. ....+ +.-+|+.+.+.... .-.|+.+|..+.+..+.-.++.. ..+..
T Consensus 217 ~~~~~~~~~~-~~~~~-------~~~~~~~s~dg~~l~~~~~~--~~~v~~~d~~~~~~~~~~~~~~~-------~~~~~ 279 (353)
T 3vgz_A 217 KILSRKKLLD-DGKEH-------FFINISLDTARQRAFITDSK--AAEVLVVDTRNGNILAKVAAPES-------LAVLF 279 (353)
T ss_dssp EEEEEEECCC-SSSCC-------CEEEEEEETTTTEEEEEESS--SSEEEEEETTTCCEEEEEECSSC-------CCEEE
T ss_pred eEEEEEEcCC-CCCCc-------ccceEEECCCCCEEEEEeCC--CCEEEEEECCCCcEEEEEEcCCC-------ceEEE
Confidence 432 222211 00110 11112 23356655554422 23455557666554443333321 01100
Q ss_pred CCCCccccCeEEEcccccCCceEEEEecCCceee
Q 017173 314 ADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRYY 347 (376)
Q Consensus 314 ~~~~g~~~n~Iyf~~~~~~~~~~~vy~l~~~~~~ 347 (376)
.-.++.+|+... ..+.+.+||+++++..
T Consensus 280 ----s~dg~~l~v~~~--~~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 280 ----NPARNEAYVTHR--QAGKVSVIDAKSYKVV 307 (353)
T ss_dssp ----ETTTTEEEEEET--TTTEEEEEETTTTEEE
T ss_pred ----CCCCCEEEEEEC--CCCeEEEEECCCCeEE
Confidence 013556777764 3556778888776543
No 35
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=86.50 E-value=18 Score=32.43 Aligned_cols=210 Identities=13% Similarity=0.120 Sum_probs=102.0
Q ss_pred EEEEEcCCCCce-EEeecCCCCCCeEEEecCCeEEEEeCCCCeEEEEcCCCcceec---CCCcccce---eEEEeecCCC
Q 017173 91 LYEFYDPAQRKT-YSLELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIK---LPRFELTY---QIVAFSCAPT 163 (376)
Q Consensus 91 ~~~~~~~~~~~~-~~~~lp~~~~~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~~---LP~~~~~~---~~~~l~~~p~ 163 (376)
....+|+.+++. .+.+++.......+ ..+|.+++... ...++.+|+.||+.+. ++...... ...+..
T Consensus 114 ~l~a~d~~tG~~~W~~~~~~~~~~~p~-~~~~~v~v~~~-~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~---- 187 (376)
T 3q7m_A 114 QVYALNTSDGTVAWQTKVAGEALSRPV-VSDGLVLIHTS-NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA---- 187 (376)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCSCCE-EETTEEEEECT-TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE----
T ss_pred EEEEEECCCCCEEEEEeCCCceEcCCE-EECCEEEEEcC-CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE----
Confidence 455678776542 34454431111111 23676666544 3479999999998432 22111000 001111
Q ss_pred CCCeEEEEEeccCCCeEEEEEEecCC--CCeeeeccCCC----CCccccceeeeEEeCCeEEEEccCCeEEEEeCCCCC-
Q 017173 164 SSSCVVFTVKHISPTVVAISTCHPGA--TEWVTDNYQNR----LPFVSSIWNKLVFCNGIFYCLSLTGWLGVFDPVKRD- 236 (376)
Q Consensus 164 ~~~~~v~~i~~~~~~~~~~~~y~~~~--~~W~~~~~~~~----~p~~~~~~~~~v~~~G~~Y~l~~~~~i~~~D~~~~~- 236 (376)
...++++ ... + .+..++..+ -.|+.....+. +.........+++.+|.+|+.+..+.+.++|+.++.
T Consensus 188 -~~~v~~g--~~~-g--~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~ 261 (376)
T 3q7m_A 188 -FGAAVVG--GDN-G--RVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQI 261 (376)
T ss_dssp -TTEEEEC--CTT-T--EEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCE
T ss_pred -CCEEEEE--cCC-C--EEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcE
Confidence 1222221 111 1 344556543 36765432110 000001234567789999999989999999998764
Q ss_pred -ceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecCCCcEEEEEecCCc--cEEEeeccCCcEEEeeCCccccc
Q 017173 237 -WGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKM--AWEEMKTLDGLTLFASFLSSQSR 313 (376)
Q Consensus 237 -~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~~~~V~~ld~~~~--~W~~v~~lg~~~lFlg~~~s~~~ 313 (376)
|+. +.. . ...++..+|.|++... +-.|+.+|..+. .|..- .++... .
T Consensus 262 ~w~~---~~~---~---------~~~~~~~~~~l~~~~~----~g~l~~~d~~tG~~~w~~~-~~~~~~--------~-- 311 (376)
T 3q7m_A 262 MWKR---ELG---S---------VNDFIVDGNRIYLVDQ----NDRVMALTIDGGVTLWTQS-DLLHRL--------L-- 311 (376)
T ss_dssp EEEE---CCC---C---------EEEEEEETTEEEEEET----TCCEEEEETTTCCEEEEEC-TTTTSC--------C--
T ss_pred Eeec---cCC---C---------CCCceEECCEEEEEcC----CCeEEEEECCCCcEEEeec-ccCCCc--------c--
Confidence 332 111 0 1123444666665542 224666676543 36532 122211 0
Q ss_pred CCCCccccCeEEEcccccCCceEEEEecCCcee
Q 017173 314 ADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRY 346 (376)
Q Consensus 314 ~~~~g~~~n~Iyf~~~~~~~~~~~vy~l~~~~~ 346 (376)
..+-+.++.||+... .+.+.++|.++++.
T Consensus 312 -~~~~~~~~~l~v~~~---~g~l~~~d~~tG~~ 340 (376)
T 3q7m_A 312 -TSPVLYNGNLVVGDS---EGYLHWINVEDGRF 340 (376)
T ss_dssp -CCCEEETTEEEEECT---TSEEEEEETTTCCE
T ss_pred -cCCEEECCEEEEEeC---CCeEEEEECCCCcE
Confidence 012335678888764 44577888887764
No 36
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=83.94 E-value=20 Score=30.95 Aligned_cols=164 Identities=12% Similarity=0.144 Sum_probs=81.0
Q ss_pred EecCC-eEEEEeCCCCeEEEEcCCC-cceec-------CCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEec
Q 017173 117 YTKDS-WLLLYRPRTHRVFFFNPFT-RDMIK-------LPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHP 187 (376)
Q Consensus 117 ~s~~G-~ll~~~~~~~~~~l~NP~T-~~~~~-------LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~ 187 (376)
.+.+| .++........+.++|.-+ ++... .+.- .....+++ +|. +.++++. .... + .+.+|+.
T Consensus 136 ~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~pd-g~~l~~~-~~~~-~--~i~~~~~ 207 (343)
T 1ri6_A 136 ISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEG-AGPRHMVF--HPN-EQYAYCV-NELN-S--SVDVWEL 207 (343)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTT-CCEEEEEE--CTT-SSEEEEE-ETTT-T--EEEEEES
T ss_pred ECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCC-CCcceEEE--CCC-CCEEEEE-eCCC-C--EEEEEEe
Confidence 35555 5666553345789999877 54322 1111 11122333 332 2333322 3222 2 4566766
Q ss_pred --CCCCeeeeccCCCCCcc---ccceeeeEEe-CC-eEEEEc-cCCeEEEEeCC--CCCceeee-eCCCCCCcccccccc
Q 017173 188 --GATEWVTDNYQNRLPFV---SSIWNKLVFC-NG-IFYCLS-LTGWLGVFDPV--KRDWGVLV-VPPPKCPENFFAKNW 256 (376)
Q Consensus 188 --~~~~W~~~~~~~~~p~~---~~~~~~~v~~-~G-~~Y~l~-~~~~i~~~D~~--~~~~~~~~-~p~p~~~~~~~~~~~ 256 (376)
.++.++.......++.. ......+.+. +| .+|+.. .++.|.+||+. ++....+. .+....+..
T Consensus 208 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~------ 281 (343)
T 1ri6_A 208 KDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRG------ 281 (343)
T ss_dssp SCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCC------
T ss_pred cCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccce------
Confidence 34555432221111110 0112233333 45 566555 46789999998 33444332 111111111
Q ss_pred cceeEEEEECCcEEEEEEecCCCcEEEEEecCCccEEEeecc
Q 017173 257 WKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMKTL 298 (376)
Q Consensus 257 ~~~~~Lv~~~G~LllV~~~~~~~~~V~~ld~~~~~W~~v~~l 298 (376)
.-+..+|+.+++....+..+.||.+|.++++++.+..+
T Consensus 282 ----~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 282 ----FNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp ----EEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEE
T ss_pred ----EEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccc
Confidence 12233577666665556778999999988888877654
No 37
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=83.90 E-value=23 Score=31.53 Aligned_cols=230 Identities=10% Similarity=0.017 Sum_probs=108.2
Q ss_pred CCceEEEEeecCcEEEEEcCCCCceEE-eecCCCCCCeEEEecCC-eEEEEeCCCCeEEEEcCCCcceecCCCcccceeE
Q 017173 78 QSPWLMYFPKFGNLYEFYDPAQRKTYS-LELPELYGSRVCYTKDS-WLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQI 155 (376)
Q Consensus 78 ~~P~l~~~~~~~~~~~~~~~~~~~~~~-~~lp~~~~~~~~~s~~G-~ll~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~ 155 (376)
....++..........++|+.+++... +..+. ....+..+.+| .|++.......+.++|+.+++.+..-........
T Consensus 42 dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~ 120 (391)
T 1l0q_A 42 DGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLG 120 (391)
T ss_dssp TSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEE
T ss_pred CCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcce
Confidence 344444333233567788887765433 34332 11223335444 4555554446899999999876543222222223
Q ss_pred EEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEe-CC-eEEEEc-cCCeEEEEeC
Q 017173 156 VAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NG-IFYCLS-LTGWLGVFDP 232 (376)
Q Consensus 156 ~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G-~~Y~l~-~~~~i~~~D~ 232 (376)
++++ |. +.++++. .... ..+.+++..+++....-... .....+.+. +| .+|+.. .++.|.+||+
T Consensus 121 ~~~s--~d-g~~l~~~-~~~~---~~v~~~d~~~~~~~~~~~~~------~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~ 187 (391)
T 1l0q_A 121 LALS--PD-GKKLYVT-NNGD---KTVSVINTVTKAVINTVSVG------RSPKGIAVTPDGTKVYVANFDSMSISVIDT 187 (391)
T ss_dssp EEEC--TT-SSEEEEE-ETTT---TEEEEEETTTTEEEEEEECC------SSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred EEEC--CC-CCEEEEE-eCCC---CEEEEEECCCCcEEEEEecC------CCcceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 4443 22 2333222 2222 15778887766543222111 112333333 45 465543 4678999999
Q ss_pred CCCCceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEe--cCCCcEEEEEecCCccEEEeeccCCcEEEeeCCcc
Q 017173 233 VKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTC--CSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSS 310 (376)
Q Consensus 233 ~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~--~~~~~~V~~ld~~~~~W~~v~~lg~~~lFlg~~~s 310 (376)
.+...... .+.. .. .....+..+|+.+++... ....+.+| |....+-...-..+.... +
T Consensus 188 ~~~~~~~~-~~~~---~~-------~~~~~~~~~g~~l~~~~~~~~~~~v~~~--d~~~~~~~~~~~~~~~~~------~ 248 (391)
T 1l0q_A 188 VTNSVIDT-VKVE---AA-------PSGIAVNPEGTKAYVTNVDKYFNTVSMI--DTGTNKITARIPVGPDPA------G 248 (391)
T ss_dssp TTTEEEEE-EECS---SE-------EEEEEECTTSSEEEEEEECSSCCEEEEE--ETTTTEEEEEEECCSSEE------E
T ss_pred CCCeEEEE-EecC---CC-------ccceEECCCCCEEEEEecCcCCCcEEEE--ECCCCeEEEEEecCCCcc------E
Confidence 87643211 1110 00 011112235776666664 23345555 555443222211222111 1
Q ss_pred cccCCCCccccCeEEEcccccCCceEEEEecCCcee
Q 017173 311 QSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRY 346 (376)
Q Consensus 311 ~~~~~~~g~~~n~Iyf~~~~~~~~~~~vy~l~~~~~ 346 (376)
+.. .-.++.||+... .++.+.+||+++++.
T Consensus 249 ~~~----s~dg~~l~~s~~--~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 249 IAV----TPDGKKVYVALS--FXNTVSVIDTATNTI 278 (391)
T ss_dssp EEE----CTTSSEEEEEET--TTTEEEEEETTTTEE
T ss_pred EEE----ccCCCEEEEEcC--CCCEEEEEECCCCcE
Confidence 110 013556776653 355677888887654
No 38
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=83.90 E-value=37 Score=33.85 Aligned_cols=107 Identities=10% Similarity=0.080 Sum_probs=53.1
Q ss_pred CCeEEEEcc--CCeEEEEeCCCCCceeeeeCCCCCCcccccccccceeEEEE-ECCcEEEEEEecCCCcEEEEEecCCcc
Q 017173 215 NGIFYCLSL--TGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVE-HKGDILVIYTCCSENPIIFKLDQSKMA 291 (376)
Q Consensus 215 ~G~~Y~l~~--~~~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~-~~G~LllV~~~~~~~~~V~~ld~~~~~ 291 (376)
+|.+||... .+.|.+++++...-..+.......|.+ ..+. .+|.||++.. ..-.|+++|.++.
T Consensus 507 ~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnG----------lavd~~~~~LY~aD~---~~~~I~~~d~dG~- 572 (699)
T 1n7d_A 507 HGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG----------ITLDLLSGRLYWVDS---KLHSISSIDVNGG- 572 (699)
T ss_dssp SSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCC----------EEECTTTCCEEEEET---TTTEEEEECSSSS-
T ss_pred CCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccE----------EEEeccCCEEEEEec---CCCeEEEEccCCC-
Confidence 688999764 367999998765433321111111211 1222 2466776552 2234555565432
Q ss_pred EEEeeccCCcEEEeeCCcccccCCCCccccCeEEEcccccCCceEEEEecCCce
Q 017173 292 WEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSR 345 (376)
Q Consensus 292 W~~v~~lg~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~~~~~~~vy~l~~~~ 345 (376)
.+..++.....+..+.-..+.++.||+++. ..+.+.+++..+++
T Consensus 573 --------~~~~~~~~~~~~~~P~glavd~~~lywtd~--~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 573 --------NRKTILEDEKRLAHPFSLAVFEDKVFWTDI--INEAIFSANRLTGS 616 (699)
T ss_dssp --------CCEEECCCSSSCSSCCCCEEETTEEEEECS--TTTCEEEEETTTEE
T ss_pred --------ceEEEEecCCcCCCceEeEEECCEEEEEeC--CCCeEEEEEccCCC
Confidence 122222211111111111235678999885 45677788877665
No 39
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=83.67 E-value=24 Score=31.52 Aligned_cols=132 Identities=11% Similarity=0.053 Sum_probs=69.1
Q ss_pred cEEEEEcCCCCce-EEeecCCCC------CCeE---EEecCCeEEEEeCCCCeEEEEcCCCccee---cCCCcccceeEE
Q 017173 90 NLYEFYDPAQRKT-YSLELPELY------GSRV---CYTKDSWLLLYRPRTHRVFFFNPFTRDMI---KLPRFELTYQIV 156 (376)
Q Consensus 90 ~~~~~~~~~~~~~-~~~~lp~~~------~~~~---~~s~~G~ll~~~~~~~~~~l~NP~T~~~~---~LP~~~~~~~~~ 156 (376)
.....+|+.+++. .+.+++... ...+ ....+|.+++...+ ..++.+|+.||+.+ .++... ....
T Consensus 63 g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-g~l~a~d~~tG~~~W~~~~~~~~--~~~p 139 (376)
T 3q7m_A 63 GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK-AQVYALNTSDGTVAWQTKVAGEA--LSRP 139 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT-SEEEEEETTTCCEEEEEECSSCC--CSCC
T ss_pred CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC-CEEEEEECCCCCEEEEEeCCCce--EcCC
Confidence 3566778876542 344443210 1112 23457777776553 47999999999854 232211 0001
Q ss_pred EeecCCCCCCeEEEEEeccCCCeEEEEEEecCCC--CeeeeccCCCCCccccceeeeEEeCCeEEEEccCCeEEEEeCCC
Q 017173 157 AFSCAPTSSSCVVFTVKHISPTVVAISTCHPGAT--EWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSLTGWLGVFDPVK 234 (376)
Q Consensus 157 ~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~--~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~~~~i~~~D~~~ 234 (376)
+.. ++. ++... ..+ .+..++..++ .|+.....+... ......++..+|.+|+-+..+.|.++|+.+
T Consensus 140 ~~~-----~~~-v~v~~-~~g---~l~~~d~~tG~~~W~~~~~~~~~~--~~~~~~~~~~~~~v~~g~~~g~l~~~d~~t 207 (376)
T 3q7m_A 140 VVS-----DGL-VLIHT-SNG---QLQALNEADGAVKWTVNLDMPSLS--LRGESAPTTAFGAAVVGGDNGRVSAVLMEQ 207 (376)
T ss_dssp EEE-----TTE-EEEEC-TTS---EEEEEETTTCCEEEEEECCC-------CCCCCCEEETTEEEECCTTTEEEEEETTT
T ss_pred EEE-----CCE-EEEEc-CCC---eEEEEECCCCcEEEEEeCCCCcee--ecCCCCcEEECCEEEEEcCCCEEEEEECCC
Confidence 111 122 22211 111 4556676544 587544322111 112345667799999888888999999987
Q ss_pred CC
Q 017173 235 RD 236 (376)
Q Consensus 235 ~~ 236 (376)
+.
T Consensus 208 G~ 209 (376)
T 3q7m_A 208 GQ 209 (376)
T ss_dssp CC
T ss_pred Cc
Confidence 64
No 40
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=82.54 E-value=25 Score=31.00 Aligned_cols=163 Identities=14% Similarity=0.146 Sum_probs=78.6
Q ss_pred EEEecCC-eEEEEeCCCCeEEEE--cCCCc----c---------eecCCCcccceeEEEeecCCCCCCeEEEEEeccCCC
Q 017173 115 VCYTKDS-WLLLYRPRTHRVFFF--NPFTR----D---------MIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPT 178 (376)
Q Consensus 115 ~~~s~~G-~ll~~~~~~~~~~l~--NP~T~----~---------~~~LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~ 178 (376)
+..+.+| +|+......+.+.++ +.-++ + ...++... ....++++.+ +.+ ++..+...+
T Consensus 160 ~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~spd---g~~-l~v~~~~~~- 233 (361)
T 3scy_A 160 VRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGS-GPRHLIFNSD---GKF-AYLINEIGG- 233 (361)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTC-CEEEEEECTT---SSE-EEEEETTTC-
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCC-CCeEEEEcCC---CCE-EEEEcCCCC-
Confidence 3346666 566665544567766 44443 2 22233221 1223444432 233 333332222
Q ss_pred eEEEEEEecCCCCeeeeccCCCCCccccceeeeEEe-CCe-EEEEccC--CeEEEEeCC--CCCceeee-eCCCCCCccc
Q 017173 179 VVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NGI-FYCLSLT--GWLGVFDPV--KRDWGVLV-VPPPKCPENF 251 (376)
Q Consensus 179 ~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G~-~Y~l~~~--~~i~~~D~~--~~~~~~~~-~p~p~~~~~~ 251 (376)
.+.+|+..++..+........+........+++- +|+ +|+.... +.|.+||++ ++.+..+. .+....|.
T Consensus 234 --~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~-- 309 (361)
T 3scy_A 234 --TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPR-- 309 (361)
T ss_dssp --EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCC--
T ss_pred --eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCc--
Confidence 4566766666554433211111111122333332 676 6665554 678898886 34443332 11111111
Q ss_pred ccccccceeEEEEECCcEEEEEEecCCCcEEEEEecCCccEEEe
Q 017173 252 FAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEM 295 (376)
Q Consensus 252 ~~~~~~~~~~Lv~~~G~LllV~~~~~~~~~V~~ld~~~~~W~~v 295 (376)
...+.-+|+.+++.......+.||++|.++++-..+
T Consensus 310 --------~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 310 --------NFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp --------EEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEEC
T ss_pred --------eEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeec
Confidence 122334588777766566779999999877654433
No 41
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=80.67 E-value=24 Score=29.48 Aligned_cols=143 Identities=8% Similarity=0.005 Sum_probs=72.9
Q ss_pred CeEEEEcCCCcceecCCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCC-CCeeeeccCCCCCcccccee
Q 017173 131 HRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGA-TEWVTDNYQNRLPFVSSIWN 209 (376)
Q Consensus 131 ~~~~l~NP~T~~~~~LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~-~~W~~~~~~~~~p~~~~~~~ 209 (376)
..+.++|+.+++...+.........+.++ |. +.++++. . . + .+.+++..+ +....+..... .....
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~~~v~~~~~s--pd-g~~l~~~-~--~-~--~i~~~d~~~~~~~~~~~~~~~----~~~~~ 88 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTPELFEAPNWS--PD-GKYLLLN-S--E-G--LLYRLSLAGDPSPEKVDTGFA----TICNN 88 (297)
T ss_dssp EEEEEEETTTTEEEEEEEESSCCEEEEEC--TT-SSEEEEE-E--T-T--EEEEEESSSCCSCEECCCTTC----CCBCS
T ss_pred eeEEEEeCCCCceeeeccCCcceEeeEEC--CC-CCEEEEE-c--C-C--eEEEEeCCCCCCceEeccccc----ccccc
Confidence 46899999998876554332223344444 32 3444443 2 1 1 577888777 65554332110 01223
Q ss_pred eeEEe-CCe-EEEEcc----CCeEEEEeCCCCCceeeeeCCCCCCcccccccccceeEE-EEECCcEEEEEEecCCCcEE
Q 017173 210 KLVFC-NGI-FYCLSL----TGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFM-VEHKGDILVIYTCCSENPII 282 (376)
Q Consensus 210 ~~v~~-~G~-~Y~l~~----~~~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~L-v~~~G~LllV~~~~~~~~~V 282 (376)
++.+. +|+ +++... ...|..+|..+.....+.. . . ....+ ...+|+.+++....+..+.|
T Consensus 89 ~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~---~--------~~~~~~~spdg~~l~~~~~~~~~~~l 155 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTK--N---L--------PSYWHGWSPDGKSFTYCGIRDQVFDI 155 (297)
T ss_dssp CCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCS--S---S--------SEEEEEECTTSSEEEEEEEETTEEEE
T ss_pred ceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeec--C---C--------CccceEECCCCCEEEEEECCCCceEE
Confidence 33333 564 444431 3567888877654332211 1 0 00111 22257766655555566889
Q ss_pred EEEecCCccEEEeeccC
Q 017173 283 FKLDQSKMAWEEMKTLD 299 (376)
Q Consensus 283 ~~ld~~~~~W~~v~~lg 299 (376)
|.+|..+.....+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~ 172 (297)
T 2ojh_A 156 YSMDIDSGVETRLTHGE 172 (297)
T ss_dssp EEEETTTCCEEECCCSS
T ss_pred EEEECCCCcceEcccCC
Confidence 99887766655554433
No 42
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=79.23 E-value=46 Score=31.87 Aligned_cols=113 Identities=19% Similarity=0.283 Sum_probs=58.5
Q ss_pred CCe-EEEEcc-CCeEEEEeCCCCCce-eeeeCCCCCCcccccccccceeEEEEEC-CcEEEEEEecCCCcEEEEEecCC-
Q 017173 215 NGI-FYCLSL-TGWLGVFDPVKRDWG-VLVVPPPKCPENFFAKNWWKGKFMVEHK-GDILVIYTCCSENPIIFKLDQSK- 289 (376)
Q Consensus 215 ~G~-~Y~l~~-~~~i~~~D~~~~~~~-~~~~p~p~~~~~~~~~~~~~~~~Lv~~~-G~LllV~~~~~~~~~V~~ld~~~- 289 (376)
+|+ +|+... ++.|.+||..++.-. .+... ..|.. .....++..+ |.+++.....++.+.||..+.++
T Consensus 334 dg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g--~~ph~------g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~ 405 (543)
T 1nir_A 334 SHRYFMTAANNSNKVAVIDSKDRRLSALVDVG--KTPHP------GRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNH 405 (543)
T ss_dssp TSCEEEEEEGGGTEEEEEETTTTEEEEEEECS--SSBCC------TTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTC
T ss_pred CCCEEEEEecCCCeEEEEECCCCeEEEeeccC--CCCCC------CCCcccCCCCCccEEEeccCCCceEEEEEeCCCCC
Confidence 676 555443 678999999986432 22211 11111 0112223333 55544333345678888776532
Q ss_pred --ccEEEeeccC---CcEEEeeCCcccccCCCCccccCeEEEccccc----CCceEEEEecCCce
Q 017173 290 --MAWEEMKTLD---GLTLFASFLSSQSRADLPGIMRNSVYFSKVRF----FGKRCISYSLNDSR 345 (376)
Q Consensus 290 --~~W~~v~~lg---~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~----~~~~~~vy~l~~~~ 345 (376)
..|+.+..|. +..+|+.. .| .+..+|...... ..+.+.+||+++++
T Consensus 406 ~~~~~~~v~~l~~~g~~~~~v~~--------~p--dg~~l~v~~~~~~~~~~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 406 PQYAWKKVAELQGQGGGSLFIKT--------HP--KSSHLYVDTTFNPDARISQSVAVFDLKNLD 460 (543)
T ss_dssp TTTBTSEEEEEECSCSCCCCEEC--------CT--TCCEEEECCTTCSSHHHHTCEEEEETTCTT
T ss_pred chhcCeEEEEEEcCCCCceEEEc--------CC--CCCcEEEecCCCCCcccCceEEEEECCCCC
Confidence 3487777663 33455532 11 366677654210 13467788888664
No 43
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=77.86 E-value=26 Score=30.38 Aligned_cols=78 Identities=14% Similarity=0.080 Sum_probs=45.1
Q ss_pred eeEE-eCCeEEEEc-cCCeEEEEeCCCCCceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecCCCcEEEEEec
Q 017173 210 KLVF-CNGIFYCLS-LTGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQ 287 (376)
Q Consensus 210 ~~v~-~~G~~Y~l~-~~~~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~~~~V~~ld~ 287 (376)
++++ -+|.+|+.+ ..+.|..||++...-..+. .+..|. -..+..+|.|++... ......|+++|.
T Consensus 36 gia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~--~~~~p~----------gia~~~dG~l~vad~-~~~~~~v~~~d~ 102 (306)
T 2p4o_A 36 NLASAPDGTIFVTNHEVGEIVSITPDGNQQIHAT--VEGKVS----------GLAFTSNGDLVATGW-NADSIPVVSLVK 102 (306)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTTCCEEEEEE--CSSEEE----------EEEECTTSCEEEEEE-CTTSCEEEEEEC
T ss_pred eEEECCCCCEEEEeCCCCeEEEECCCCceEEEEe--CCCCce----------eEEEcCCCcEEEEec-cCCcceEEEEcC
Confidence 3444 378899987 4678999999864222222 111111 112334688765443 333467888887
Q ss_pred CCccEEEeeccCC
Q 017173 288 SKMAWEEMKTLDG 300 (376)
Q Consensus 288 ~~~~W~~v~~lg~ 300 (376)
.+.+.+.+..+++
T Consensus 103 ~~g~~~~~~~~~~ 115 (306)
T 2p4o_A 103 SDGTVETLLTLPD 115 (306)
T ss_dssp TTSCEEEEEECTT
T ss_pred CCCeEEEEEeCCC
Confidence 7777776666543
No 44
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=77.50 E-value=42 Score=30.47 Aligned_cols=103 Identities=14% Similarity=0.041 Sum_probs=53.1
Q ss_pred CCeEEEEeCCCCeEEEEcCCCcceecC-CCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccC
Q 017173 120 DSWLLLYRPRTHRVFFFNPFTRDMIKL-PRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQ 198 (376)
Q Consensus 120 ~G~ll~~~~~~~~~~l~NP~T~~~~~L-P~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~ 198 (376)
.++|++.... .+..+++-++....+ +.+.. ...+..++..+ .+++.+...+ .+..++......+.+...
T Consensus 87 ~~~l~~~~~~--~I~~i~~~~~~~~~~~~~~~~---~~gl~~d~~~~--~ly~~D~~~~---~I~r~~~~g~~~~~~~~~ 156 (386)
T 3v65_B 87 EPVLLFANRI--DIRQVLPHRSEYTLLLNNLEN---AIALDFHHRRE--LVFWSDVTLD---RILRANLNGSNVEEVVST 156 (386)
T ss_dssp CCEEEEECBS--CEEEECTTSCCCEEEECSCSC---EEEEEEETTTT--EEEEEETTTT---EEEEEETTSCCEEEEECS
T ss_pred cceeEeecCc--cceeeccCCCcEEEEecCCCc---cEEEEEecCCC--eEEEEeCCCC---cEEEEecCCCCcEEEEeC
Confidence 5677666543 688888876654332 32222 22333333222 3444443222 455555554444332211
Q ss_pred CCCCccccceeeeEEe--CCeEEEEcc-CCeEEEEeCCCCCc
Q 017173 199 NRLPFVSSIWNKLVFC--NGIFYCLSL-TGWLGVFDPVKRDW 237 (376)
Q Consensus 199 ~~~p~~~~~~~~~v~~--~G~~Y~l~~-~~~i~~~D~~~~~~ 237 (376)
.+ .....+++- +|.+||... .+.|.+++++...-
T Consensus 157 -~~----~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~ 193 (386)
T 3v65_B 157 -GL----ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 193 (386)
T ss_dssp -SC----SCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC
T ss_pred -CC----CCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce
Confidence 11 122344443 789999876 56899999986543
No 45
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=77.47 E-value=40 Score=30.24 Aligned_cols=151 Identities=10% Similarity=0.069 Sum_probs=74.4
Q ss_pred ecCC-eEEEEeCCCCeEEEEcCCCccee-cC--CCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCee
Q 017173 118 TKDS-WLLLYRPRTHRVFFFNPFTRDMI-KL--PRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWV 193 (376)
Q Consensus 118 s~~G-~ll~~~~~~~~~~l~NP~T~~~~-~L--P~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~ 193 (376)
+.+| .+++.......+.++|.-+++.+ .+ .........+.++ | ++.+++.+- . . ..+.+|+..++.-.
T Consensus 140 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~~~l~~~~-~-d---~~i~iwd~~~~~~~ 211 (402)
T 2aq5_A 140 HPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWS--R-DGALICTSC-R-D---KRVRVIEPRKGTVV 211 (402)
T ss_dssp CSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEEC--T-TSSCEEEEE-T-T---SEEEEEETTTTEEE
T ss_pred CcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEEC--C-CCCEEEEEe-c-C---CcEEEEeCCCCcee
Confidence 4554 34433333457999999998754 33 2222222334443 3 234444332 1 1 15778887765432
Q ss_pred eeccCCCCCccccceeeeEEe-CCeEEEEc----cCCeEEEEeCCCCCc--eeeeeCCCCCCcccccccccceeEEEEEC
Q 017173 194 TDNYQNRLPFVSSIWNKLVFC-NGIFYCLS----LTGWLGVFDPVKRDW--GVLVVPPPKCPENFFAKNWWKGKFMVEHK 266 (376)
Q Consensus 194 ~~~~~~~~p~~~~~~~~~v~~-~G~~Y~l~----~~~~i~~~D~~~~~~--~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~ 266 (376)
..-...+- ......+++. +|.+.+.+ .++.|.+||+.+..- ....... ... ........+
T Consensus 212 ~~~~~~~~---~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~-------v~~~~~s~~ 278 (402)
T 2aq5_A 212 AEKDRPHE---GTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDT---SSG-------VLLPFFDPD 278 (402)
T ss_dssp EEEECSSC---SSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCC---CSS-------CEEEEEETT
T ss_pred eeeccCCC---CCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccC---CCc-------eeEEEEcCC
Confidence 21101100 0112233333 67766664 578899999986432 1111111 000 111122335
Q ss_pred CcEEEEEEecCCCcEEEEEecCC
Q 017173 267 GDILVIYTCCSENPIIFKLDQSK 289 (376)
Q Consensus 267 G~LllV~~~~~~~~~V~~ld~~~ 289 (376)
|..+++....+..+.||.++...
T Consensus 279 ~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 279 TNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp TTEEEEEETTCSCEEEEEECSST
T ss_pred CCEEEEEEcCCCeEEEEEecCCC
Confidence 77776666566788999886544
No 46
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=76.87 E-value=31 Score=28.70 Aligned_cols=183 Identities=10% Similarity=-0.067 Sum_probs=86.0
Q ss_pred EEEEEcCCCCceEEeecCCCCCCeEEEecCCeEEEEeCCCCeEEEEcCCC-cceecCCCcc--cceeEEEeecCCCCCCe
Q 017173 91 LYEFYDPAQRKTYSLELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFT-RDMIKLPRFE--LTYQIVAFSCAPTSSSC 167 (376)
Q Consensus 91 ~~~~~~~~~~~~~~~~lp~~~~~~~~~s~~G~ll~~~~~~~~~~l~NP~T-~~~~~LP~~~--~~~~~~~l~~~p~~~~~ 167 (376)
...++|+.+++...+.-..-.-..+.-+.+|-.++... ...++++|.-+ ++...+.... .....+.++ | ++.+
T Consensus 23 ~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s--p-dg~~ 98 (297)
T 2ojh_A 23 SIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS--P-DGAL 98 (297)
T ss_dssp EEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC--T-TSSE
T ss_pred eEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEEC--C-CCCE
Confidence 45567777766543321111112233355665444433 34899999999 8766554332 112223443 2 2344
Q ss_pred EEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEe-CCe-EEE-EccCCe--EEEEeCCCCCceeeee
Q 017173 168 VVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NGI-FYC-LSLTGW--LGVFDPVKRDWGVLVV 242 (376)
Q Consensus 168 ~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G~-~Y~-l~~~~~--i~~~D~~~~~~~~~~~ 242 (376)
+++.... ..+...+..++..++.-+.+.... ....+.+. +|. +++ ...++. |+.+|..+.....+.
T Consensus 99 l~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~-------~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~- 169 (297)
T 2ojh_A 99 YAISDKV-EFGKSAIYLLPSTGGTPRLMTKNL-------PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLT- 169 (297)
T ss_dssp EEEEECT-TTSSCEEEEEETTCCCCEECCSSS-------SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECC-
T ss_pred EEEEEeC-CCCcceEEEEECCCCceEEeecCC-------CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcc-
Confidence 4443321 112345666766555433332211 12222333 554 443 334554 444455544332221
Q ss_pred CCCCCCcccccccccceeEEEEECCcEEEEEEecCCCcEEEEEecCCccEEEee
Q 017173 243 PPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMK 296 (376)
Q Consensus 243 p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~~~~V~~ld~~~~~W~~v~ 296 (376)
.. +.. .......-+|+.+++.......+.||.++........+.
T Consensus 170 -~~--~~~-------~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 170 -HG--EGR-------NDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp -CS--SSC-------EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC
T ss_pred -cC--CCc-------cccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe
Confidence 11 110 111122235777666665567789999987665555444
No 47
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=76.81 E-value=49 Score=32.63 Aligned_cols=123 Identities=11% Similarity=0.095 Sum_probs=63.1
Q ss_pred eeeEEeCCeEEEEccCCeEEEEeCCCCC--ceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecCCCcEEEEEe
Q 017173 209 NKLVFCNGIFYCLSLTGWLGVFDPVKRD--WGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLD 286 (376)
Q Consensus 209 ~~~v~~~G~~Y~l~~~~~i~~~D~~~~~--~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~~~~V~~ld 286 (376)
..+++.+|++|+.+..+.|.++|..++. |+.-. ..+. .......+.....-++..+|.|++.. .+-.|+.+|
T Consensus 60 ~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~v~v~~----~dg~l~alD 133 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSWSRVIAVDAASGKELWRYDP-EVAK-VKARTSCCDAVNRGVALWGDKVYVGT----LDGRLIALD 133 (668)
T ss_dssp CCCEEETTEEEEEEGGGEEEEEETTTCCEEEEECC-CCCG-GGGGGCTTCSCCCCCEEEBTEEEEEC----TTSEEEEEE
T ss_pred cCCEEECCEEEEECCCCeEEEEECCCChhceEECC-CCCc-cccccccccCCccceEEECCEEEEEc----CCCEEEEEE
Confidence 3467889999999999999999998764 65311 1110 00000000000111223456555432 234688888
Q ss_pred cCCc--cEEEeeccCCcEEEeeCCcccccCCCCccccCeEEEccccc---CCceEEEEecCCce
Q 017173 287 QSKM--AWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRF---FGKRCISYSLNDSR 345 (376)
Q Consensus 287 ~~~~--~W~~v~~lg~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~---~~~~~~vy~l~~~~ 345 (376)
.++. .|+.-. ++.. ........|-+.++.||+..... ....+.+||.++++
T Consensus 134 ~~tG~~~W~~~~--~~~~------~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~ 189 (668)
T 1kv9_A 134 AKTGKAIWSQQT--TDPA------KPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGK 189 (668)
T ss_dssp TTTCCEEEEEEC--SCTT------SSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCC
T ss_pred CCCCCEeeeecc--CCCC------CcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCc
Confidence 7654 476432 2110 00000111334577888765321 13567788888875
No 48
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=76.31 E-value=57 Score=32.26 Aligned_cols=122 Identities=14% Similarity=0.125 Sum_probs=64.1
Q ss_pred eeeEEeCCeEEEEccCCeEEEEeCCCCC--ceeeeeCCCCCCccccccc-ccceeEEEEECCcEEEEEEecCCCcEEEEE
Q 017173 209 NKLVFCNGIFYCLSLTGWLGVFDPVKRD--WGVLVVPPPKCPENFFAKN-WWKGKFMVEHKGDILVIYTCCSENPIIFKL 285 (376)
Q Consensus 209 ~~~v~~~G~~Y~l~~~~~i~~~D~~~~~--~~~~~~p~p~~~~~~~~~~-~~~~~~Lv~~~G~LllV~~~~~~~~~V~~l 285 (376)
..+++.+|++|+.+.++.|.++|..++. |+.-. ..+ ........ .....-++..+|.|++. ..+-.|+.|
T Consensus 71 ~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~-~~~--~~~~~~~~~~~~~~~~a~~~~~v~v~----~~dg~l~al 143 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASWSVVHAIDTRTGNRIWTYDP-QID--RSTGFKGCCDVVNRGVALWKGKVYVG----AWDGRLIAL 143 (677)
T ss_dssp CCCEEETTEEEEECGGGCEEEEETTTTEEEEEECC-CCC--GGGGGGSSSCSCCCCCEEETTEEEEE----CTTSEEEEE
T ss_pred eCCEEECCEEEEECCCCeEEEEECCCCcEEEEEcC-CCC--ccccccccccCCCCCceEECCEEEEE----cCCCEEEEE
Confidence 3467889999999988999999998764 64321 111 00000000 00111223345655544 223467888
Q ss_pred ecCCc--cEEEeeccC-CcEEEeeCCcccccCCCCccccCeEEEccccc---CCceEEEEecCCce
Q 017173 286 DQSKM--AWEEMKTLD-GLTLFASFLSSQSRADLPGIMRNSVYFSKVRF---FGKRCISYSLNDSR 345 (376)
Q Consensus 286 d~~~~--~W~~v~~lg-~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~---~~~~~~vy~l~~~~ 345 (376)
|.+++ .|+.- ++ +.. ..... ..-+-+.++.||+..... ....+.+||.++++
T Consensus 144 D~~tG~~~W~~~--~~~~~~----~~~~~--~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~ 201 (677)
T 1kb0_A 144 DAATGKEVWHQN--TFEGQK----GSLTI--TGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGE 201 (677)
T ss_dssp ETTTCCEEEEEE--TTTTCC----SSCBC--CSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCC
T ss_pred ECCCCCEEeeec--CCcCcC----cCccc--ccCcEEECCEEEEEecccccCCCCEEEEEECCCCc
Confidence 87654 46643 32 210 00011 111345678888875421 14567888888876
No 49
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=75.57 E-value=41 Score=29.36 Aligned_cols=226 Identities=10% Similarity=0.001 Sum_probs=100.9
Q ss_pred EcCCCCceEEeecC-C-CCCCeEEEecCCeEEEEeCC--CCeEEEEcCCCcceecCCC---cccceeEEEeecCCCCCCe
Q 017173 95 YDPAQRKTYSLELP-E-LYGSRVCYTKDSWLLLYRPR--THRVFFFNPFTRDMIKLPR---FELTYQIVAFSCAPTSSSC 167 (376)
Q Consensus 95 ~~~~~~~~~~~~lp-~-~~~~~~~~s~~G~ll~~~~~--~~~~~l~NP~T~~~~~LP~---~~~~~~~~~l~~~p~~~~~ 167 (376)
+|..+++...+... . .....+..+.+|-|+..... ...+.+++.-+++...+.. .......++++.+ +.+
T Consensus 23 ~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spd---g~~ 99 (347)
T 3hfq_A 23 LDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEA---RQL 99 (347)
T ss_dssp EETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETT---TTE
T ss_pred EcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCC---CCE
Confidence 45655655443211 1 11223444667765554432 3478999987776433322 1111223444432 233
Q ss_pred EEEEEeccCCCeEEEEEEecC-CCCeeeecc---CCCCCc---cccceeeeEEe-CCeEEEEcc-CCeEEEEeCC-CCCc
Q 017173 168 VVFTVKHISPTVVAISTCHPG-ATEWVTDNY---QNRLPF---VSSIWNKLVFC-NGIFYCLSL-TGWLGVFDPV-KRDW 237 (376)
Q Consensus 168 ~v~~i~~~~~~~~~~~~y~~~-~~~W~~~~~---~~~~p~---~~~~~~~~v~~-~G~~Y~l~~-~~~i~~~D~~-~~~~ 237 (376)
++++ ....+ .+.+|+.. ++..+.+.. ...-|. .......+++- +|++|+... .+.|.+||+. ++..
T Consensus 100 l~~~-~~~~~---~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~ 175 (347)
T 3hfq_A 100 VYSA-NYHKG---TAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQL 175 (347)
T ss_dssp EEEE-ETTTT---EEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCE
T ss_pred EEEE-eCCCC---EEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcE
Confidence 3322 32221 34555543 333332221 100000 00112233333 788777654 5679999988 4433
Q ss_pred eeee-eCCCCCCcccccccccceeEEE-EECCcEEEEEEecCCCcEEEEEecCCccEEEeecc---CCcEEEeeCCcccc
Q 017173 238 GVLV-VPPPKCPENFFAKNWWKGKFMV-EHKGDILVIYTCCSENPIIFKLDQSKMAWEEMKTL---DGLTLFASFLSSQS 312 (376)
Q Consensus 238 ~~~~-~p~p~~~~~~~~~~~~~~~~Lv-~~~G~LllV~~~~~~~~~V~~ld~~~~~W~~v~~l---g~~~lFlg~~~s~~ 312 (376)
..+. ...+... ....+. .-+|+.+++.......+.||.++..+.++..+..+ +.. +-+......
T Consensus 176 ~~~~~~~~~~g~---------~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~ 244 (347)
T 3hfq_A 176 SEQSVLTMEAGF---------GPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPAD--YTAHNGAAA 244 (347)
T ss_dssp EEEEEEECCTTC---------CEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTT--CCSCCEEEE
T ss_pred EEeeeEEcCCCC---------CCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCC--CCCCCccee
Confidence 3221 1111100 111222 33587666655555678899888766666554433 221 000000000
Q ss_pred cCCCCccccCeEEEcccccCCceEEEEecC
Q 017173 313 RADLPGIMRNSVYFSKVRFFGKRCISYSLN 342 (376)
Q Consensus 313 ~~~~~g~~~n~Iyf~~~~~~~~~~~vy~l~ 342 (376)
. .+ .-.+..||+... ..+.+.+|+++
T Consensus 245 i-~~-spdG~~l~v~~~--~~~~v~v~~~~ 270 (347)
T 3hfq_A 245 I-RL-SHDGHFLYVSNR--GYNTLAVFAVT 270 (347)
T ss_dssp E-EE-CTTSCEEEEEEE--TTTEEEEEEEC
T ss_pred E-EE-CCCCCEEEEEeC--CCCEEEEEEEC
Confidence 0 00 013556777664 34566788876
No 50
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=75.40 E-value=61 Score=31.36 Aligned_cols=152 Identities=13% Similarity=0.029 Sum_probs=77.7
Q ss_pred CeEEEEcCCC------cceecCC-CcccceeEEEeecCCCCCCeEEEEEeccCC---CeEEEEEEecC-CC---Ceeeec
Q 017173 131 HRVFFFNPFT------RDMIKLP-RFELTYQIVAFSCAPTSSSCVVFTVKHISP---TVVAISTCHPG-AT---EWVTDN 196 (376)
Q Consensus 131 ~~~~l~NP~T------~~~~~LP-~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~---~~~~~~~y~~~-~~---~W~~~~ 196 (376)
..++++|.-+ ++...|. .-......+.++ | ++.++++....... +...+.+++.. ++ ..+.+.
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~S--p-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~ 237 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLS--P-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL 237 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEEC--T-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecCCCcccCceEC--C-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC
Confidence 3689999998 7766665 332222223343 2 23555544332211 12467788877 45 333322
Q ss_pred cCCCCCccccceeeeEEe-CCeEEEEccC-C--eEEEEeCCCCCceeeeeCCCCCCcccccccccc-eeEEEEE-CCcEE
Q 017173 197 YQNRLPFVSSIWNKLVFC-NGIFYCLSLT-G--WLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWK-GKFMVEH-KGDIL 270 (376)
Q Consensus 197 ~~~~~p~~~~~~~~~v~~-~G~~Y~l~~~-~--~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~-~~~Lv~~-~G~Ll 270 (376)
... ......+.+. +|++|+.... + .|..+|+.++.+..+.. . ........+.. ...+.-+ +|+++
T Consensus 238 ~~~-----~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~-~---~~~~~~p~w~~~~~~~~~~~~~~~~ 308 (662)
T 3azo_A 238 GGP-----EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCR-R---EEEFAGPLWTPGMRWFAPLANGLIA 308 (662)
T ss_dssp EET-----TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSC-C---SSBSSCCCCSTTCCSEEECTTSCEE
T ss_pred CCC-----CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccc-c---cccccCccccccCceEeEeCCCEEE
Confidence 110 0123344444 7888877653 3 79999987766543311 1 01100011111 1122223 57766
Q ss_pred EEEEecCCCcEEEEEecCCccEEEee
Q 017173 271 VIYTCCSENPIIFKLDQSKMAWEEMK 296 (376)
Q Consensus 271 lV~~~~~~~~~V~~ld~~~~~W~~v~ 296 (376)
+... . ....||.+|.++.+...+.
T Consensus 309 ~~~~-~-~~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 309 VVHG-K-GAAVLGILDPESGELVDAA 332 (662)
T ss_dssp EEEB-S-SSCEEEEEETTTTEEEECC
T ss_pred EEEE-c-CccEEEEEECCCCcEEEec
Confidence 6554 3 7789999998776655543
No 51
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=74.76 E-value=37 Score=28.55 Aligned_cols=131 Identities=8% Similarity=0.055 Sum_probs=66.2
Q ss_pred EEEEEcCCCCceEEeecCC-CCC-CeEEEecCCeEEEEeCCCCeEEEEcCCCcceec--CCCcccceeEEEeecCCCCCC
Q 017173 91 LYEFYDPAQRKTYSLELPE-LYG-SRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIK--LPRFELTYQIVAFSCAPTSSS 166 (376)
Q Consensus 91 ~~~~~~~~~~~~~~~~lp~-~~~-~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~~--LP~~~~~~~~~~l~~~p~~~~ 166 (376)
....+++ +++...+.++. ... ..+....+|-|++.....+.+.++|| +++... +|........+++ ++. +.
T Consensus 163 ~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~--~~~-g~ 237 (299)
T 2z2n_A 163 AIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITA--GAG-ID 237 (299)
T ss_dssp EEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE--CST-TC
T ss_pred EEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEE--CCC-CC
Confidence 4455677 55554444442 111 12333456777777655558999999 887544 3321111122333 332 22
Q ss_pred eEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEeCCeEEEEccCCeEEEEeCCCCC
Q 017173 167 CVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSLTGWLGVFDPVKRD 236 (376)
Q Consensus 167 ~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~~~~i~~~D~~~~~ 236 (376)
++......+ .+..+++ ++.-.....+.. ......+++-+|.+|+.+..+.|..||+.++.
T Consensus 238 --l~v~~~~~~---~i~~~d~-~g~~~~~~~~~~----~~~~~~i~~~~g~l~v~~~~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 238 --LWFTEWGAN---KIGRLTS-NNIIEEYPIQIK----SAEPHGICFDGETIWFAMECDKIGKLTLIKDN 297 (299)
T ss_dssp --EEEEETTTT---EEEEEET-TTEEEEEECSSS----SCCEEEEEECSSCEEEEETTTEEEEEEEC---
T ss_pred --EEEeccCCc---eEEEECC-CCceEEEeCCCC----CCccceEEecCCCEEEEecCCcEEEEEcCccc
Confidence 222221111 4566776 444333322111 12234444477899988777889999988653
No 52
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=73.35 E-value=47 Score=29.04 Aligned_cols=158 Identities=11% Similarity=0.146 Sum_probs=78.4
Q ss_pred CCeEEEEeCCCCeEEEEcCCCcceecCC--CcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeecc
Q 017173 120 DSWLLLYRPRTHRVFFFNPFTRDMIKLP--RFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNY 197 (376)
Q Consensus 120 ~G~ll~~~~~~~~~~l~NP~T~~~~~LP--~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~ 197 (376)
+|-+++.......+.++|.-+++...+- ........++++.+ +.+.+.+ ...+ .+.+|+..++.-.....
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pd---g~~lasg--~~dg---~i~iwd~~~~~~~~~~~ 209 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKD---SLLLALY--SPDG---ILDVYNLSSPDQASSRF 209 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTT---SCEEEEE--CTTS---CEEEEESSCTTSCCEEC
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCC---CCEEEEE--cCCC---EEEEEECCCCCCCccEE
Confidence 4544443333457999999988764321 11112334444432 2333322 2222 56788877654321111
Q ss_pred CCCCCccccceeeeEEe-CCeEEEEccCCeEEEEeCCCCCc-eeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEe
Q 017173 198 QNRLPFVSSIWNKLVFC-NGIFYCLSLTGWLGVFDPVKRDW-GVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTC 275 (376)
Q Consensus 198 ~~~~p~~~~~~~~~v~~-~G~~Y~l~~~~~i~~~D~~~~~~-~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~ 275 (376)
.... ......+.+. +|...+...++.|.+||+.+..- ..+. . ........ .....-...+|+.+++...
T Consensus 210 ~~~h---~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~--~-~~~~~~~~---~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 210 PVDE---EAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYP--T-YTIPEFKT---GTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp CCCT---TSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSC--C-CBC--------CCEEEEECTTSSEEEEEET
T ss_pred eccC---CCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeec--c-cccccccc---cceEEEECCCCCEEEEecC
Confidence 1100 1234444444 56655555567899999987532 1111 0 00000000 0001112235777777654
Q ss_pred cCCCcEEEEEecCCccEEE
Q 017173 276 CSENPIIFKLDQSKMAWEE 294 (376)
Q Consensus 276 ~~~~~~V~~ld~~~~~W~~ 294 (376)
.+..+.||.++.....|..
T Consensus 281 ~d~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 281 ESNSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp TTTEEEEEEECTTTCSEEE
T ss_pred CCCcEEEEEEcccccceEe
Confidence 4677999999888888987
No 53
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=72.96 E-value=39 Score=28.03 Aligned_cols=108 Identities=10% Similarity=0.076 Sum_probs=57.4
Q ss_pred EEEecCCeEEEEeCCCCeEEEEcCCCcceecCCCccc-ceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCee
Q 017173 115 VCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFEL-TYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWV 193 (376)
Q Consensus 115 ~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~~LP~~~~-~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~ 193 (376)
+....+|-|++... .+.+.++|+-++....++.... ....+++. +. +. ++..+...+ .+..++.++....
T Consensus 72 i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~--~~-g~--l~v~~~~~~---~i~~~~~~~~~~~ 142 (270)
T 1rwi_B 72 LAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVD--TQ-GA--VYVADRGNN---RVVKLAAGSKTQT 142 (270)
T ss_dssp EEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEEC--TT-CC--EEEEEGGGT---EEEEECTTCCSCE
T ss_pred eEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEEC--CC-CC--EEEEECCCC---EEEEEECCCceeE
Confidence 44455677777765 4589999998876655543221 12234443 32 22 222222221 4555666655443
Q ss_pred eeccCCCCCccccceeeeEEe-CCeEEEEcc-CCeEEEEeCCCCC
Q 017173 194 TDNYQNRLPFVSSIWNKLVFC-NGIFYCLSL-TGWLGVFDPVKRD 236 (376)
Q Consensus 194 ~~~~~~~~p~~~~~~~~~v~~-~G~~Y~l~~-~~~i~~~D~~~~~ 236 (376)
...... . ....++++. +|.+|+.+. .+.|.+||+.+..
T Consensus 143 ~~~~~~-~----~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 143 VLPFTG-L----NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN 182 (270)
T ss_dssp ECCCCS-C----CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred eecccc-C----CCceeEEEeCCCCEEEEECCCCEEEEEecCCCc
Confidence 322111 1 123344444 688888765 5689999988754
No 54
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=72.90 E-value=53 Score=29.52 Aligned_cols=134 Identities=15% Similarity=0.121 Sum_probs=67.6
Q ss_pred cEEEEEcCCCCceEEee-cCCC--CCCe---EEEecCCeEEEEeCCCCeEEEEcCCCccee-cCCCcccceeEEEeecCC
Q 017173 90 NLYEFYDPAQRKTYSLE-LPEL--YGSR---VCYTKDSWLLLYRPRTHRVFFFNPFTRDMI-KLPRFELTYQIVAFSCAP 162 (376)
Q Consensus 90 ~~~~~~~~~~~~~~~~~-lp~~--~~~~---~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~-~LP~~~~~~~~~~l~~~p 162 (376)
....++|+.+++..... .+.+ .... +..+.+|-+++.......+.++|+-+++.+ .++........++++.+
T Consensus 144 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~- 222 (433)
T 3bws_A 144 EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPI- 222 (433)
T ss_dssp SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETT-
T ss_pred CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCC-
Confidence 34677788776654421 1111 1111 222557777766655568999999887654 23322222233444432
Q ss_pred CCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEe-CC-eEEEEc--------cCCeEEEEeC
Q 017173 163 TSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NG-IFYCLS--------LTGWLGVFDP 232 (376)
Q Consensus 163 ~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G-~~Y~l~--------~~~~i~~~D~ 232 (376)
+.++ +......+ .+.+|+..++.....-.. . .....+.+. +| .+|+.. .++.|.+||+
T Consensus 223 --~~~l-~~~~~~~~---~i~~~d~~~~~~~~~~~~---~---~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~ 290 (433)
T 3bws_A 223 --RDLV-YCSNWISE---DISVIDRKTKLEIRKTDK---I---GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSM 290 (433)
T ss_dssp --TTEE-EEEETTTT---EEEEEETTTTEEEEECCC---C---SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEET
T ss_pred --CCEE-EEEecCCC---cEEEEECCCCcEEEEecC---C---CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEEC
Confidence 2333 23232222 567888776644321111 1 123333333 55 455544 2568999999
Q ss_pred CCCC
Q 017173 233 VKRD 236 (376)
Q Consensus 233 ~~~~ 236 (376)
.+..
T Consensus 291 ~~~~ 294 (433)
T 3bws_A 291 DKEK 294 (433)
T ss_dssp TTTE
T ss_pred CCCc
Confidence 8764
No 55
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=72.81 E-value=76 Score=31.43 Aligned_cols=124 Identities=13% Similarity=0.099 Sum_probs=63.4
Q ss_pred eeeEEeCCeEEEEccCCeEEEEeCCCCC--ceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecCCCcEEEEEe
Q 017173 209 NKLVFCNGIFYCLSLTGWLGVFDPVKRD--WGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLD 286 (376)
Q Consensus 209 ~~~v~~~G~~Y~l~~~~~i~~~D~~~~~--~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~~~~V~~ld 286 (376)
..+++.+|++|+.+.++.|.++|..++. |+.- ...+.. ......+.....-++..+|.|++.. .+-.|+.||
T Consensus 64 ~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~-~~~~~~-~~~~~~~~~~~~~~~~~~g~v~v~~----~dg~l~AlD 137 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPFSVVYALDARDGRLIWKYD-PQSDRH-RAGEACCDAVNRGVAVWKGKVYVGV----LDGRLEAID 137 (689)
T ss_dssp CCCEEETTEEEEECGGGCEEEEETTTCCEEEEEC-CCCCGG-GGGGCTTCSCCCCCEEETTEEEEEC----TTSEEEEEE
T ss_pred ecCEEECCEEEEEcCCCeEEEEECCCCceeEEEc-CCCCcc-ccccccccCCCCccEEECCEEEEEc----cCCEEEEEE
Confidence 3467889999999988999999998764 6531 111100 0000000000111233456555432 234678888
Q ss_pred cCCc--cEEEeeccCCcEEEeeCCcccccCCCCccccCeEEEccccc---CCceEEEEecCCce
Q 017173 287 QSKM--AWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRF---FGKRCISYSLNDSR 345 (376)
Q Consensus 287 ~~~~--~W~~v~~lg~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~---~~~~~~vy~l~~~~ 345 (376)
.+++ .|+.-...+... ......-|-+.++.||+..... ....+.+||.++++
T Consensus 138 a~TG~~~W~~~~~~~~~~-------~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~ 194 (689)
T 1yiq_A 138 AKTGQRAWSVDTRADHKR-------SYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGK 194 (689)
T ss_dssp TTTCCEEEEEECCSCTTS-------CCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCC
T ss_pred CCCCCEeeeecCcCCCCC-------CccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCc
Confidence 7654 476533211100 0000111344577888865321 13567888888886
No 56
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=72.68 E-value=45 Score=28.59 Aligned_cols=102 Identities=15% Similarity=0.129 Sum_probs=55.9
Q ss_pred CCeEEEEeCCCCeEEEEcCCCcceecCCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCC
Q 017173 120 DSWLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQN 199 (376)
Q Consensus 120 ~G~ll~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~ 199 (376)
+|.|+..+.....++.+||-|+....+.... ....+++. +. +. .+++. . ..+..++..++..+.+....
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~-~~~~i~~~--~d-G~-l~v~~-~-----~~l~~~d~~~g~~~~~~~~~ 92 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA-PVSSVALR--QS-GG-YVATI-G-----TKFCALNWKEQSAVVLATVD 92 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEECSS-CEEEEEEB--TT-SS-EEEEE-T-----TEEEEEETTTTEEEEEEECC
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEeCCC-ceEEEEEC--CC-CC-EEEEE-C-----CeEEEEECCCCcEEEEEecC
Confidence 5667777665568999999988654322111 12234443 22 23 33332 1 15677888888776554321
Q ss_pred -CCCccccceeeeEEe-CCeEEEEcc------------CCeEEEEeCCC
Q 017173 200 -RLPFVSSIWNKLVFC-NGIFYCLSL------------TGWLGVFDPVK 234 (376)
Q Consensus 200 -~~p~~~~~~~~~v~~-~G~~Y~l~~------------~~~i~~~D~~~ 234 (376)
..+ .....++++- +|.+|+-+. .+.|+.+|.+.
T Consensus 93 ~~~~--~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 93 NDKK--NNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp TTCS--SEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred CCCC--CCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 111 1234555444 688887642 24678888764
No 57
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=72.52 E-value=54 Score=29.40 Aligned_cols=102 Identities=10% Similarity=0.022 Sum_probs=54.7
Q ss_pred CCeEEEEeCCCCeEEEEcCCCcceecCCCcc--cceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeecc
Q 017173 120 DSWLLLYRPRTHRVFFFNPFTRDMIKLPRFE--LTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNY 197 (376)
Q Consensus 120 ~G~ll~~~~~~~~~~l~NP~T~~~~~LP~~~--~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~ 197 (376)
++.++.... .+.+.++|..+++...+-... .....++++ | ++.+++.+.. .+ .+.+|+..++.-...-.
T Consensus 103 ~~~l~~~~~-d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s--~-~~~~l~~~~~--dg---~i~iwd~~~~~~~~~~~ 173 (401)
T 4aez_A 103 NLNVVAVAL-ERNVYVWNADSGSVSALAETDESTYVASVKWS--H-DGSFLSVGLG--NG---LVDIYDVESQTKLRTMA 173 (401)
T ss_dssp TTSEEEEEE-TTEEEEEETTTCCEEEEEECCTTCCEEEEEEC--T-TSSEEEEEET--TS---CEEEEETTTCCEEEEEC
T ss_pred CCCEEEEEC-CCeEEEeeCCCCcEeEeeecCCCCCEEEEEEC--C-CCCEEEEECC--CC---eEEEEECcCCeEEEEec
Confidence 444554443 348999999999865432221 122234443 3 2345444322 22 46678876654322111
Q ss_pred CCCCCccccceeeeEEeCCeEEEEccCCeEEEEeCCCC
Q 017173 198 QNRLPFVSSIWNKLVFCNGIFYCLSLTGWLGVFDPVKR 235 (376)
Q Consensus 198 ~~~~p~~~~~~~~~v~~~G~~Y~l~~~~~i~~~D~~~~ 235 (376)
. . ......+.+.+..++....++.|.+||+...
T Consensus 174 ~--~---~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~ 206 (401)
T 4aez_A 174 G--H---QARVGCLSWNRHVLSSGSRSGAIHHHDVRIA 206 (401)
T ss_dssp C--C---SSCEEEEEEETTEEEEEETTSEEEEEETTSS
T ss_pred C--C---CCceEEEEECCCEEEEEcCCCCEEEEecccC
Confidence 1 1 1234445554445666667899999999853
No 58
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=71.54 E-value=51 Score=28.69 Aligned_cols=165 Identities=13% Similarity=0.185 Sum_probs=80.6
Q ss_pred EEecCCeEEEEeCCCCeEEEEcCC-Ccceec-----CCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCC
Q 017173 116 CYTKDSWLLLYRPRTHRVFFFNPF-TRDMIK-----LPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGA 189 (376)
Q Consensus 116 ~~s~~G~ll~~~~~~~~~~l~NP~-T~~~~~-----LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~ 189 (376)
..+.+|-++......+.+.+++.- +++... ++.-. ....++++ |. +.+++ ...... +.+.+.-++..+
T Consensus 147 ~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~-~p~~~~~s--pd-g~~l~-v~~~~~-~~v~v~~~~~~~ 220 (347)
T 3hfq_A 147 DLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGF-GPRHLVFS--PD-GQYAF-LAGELS-SQIASLKYDTQT 220 (347)
T ss_dssp EECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTC-CEEEEEEC--TT-SSEEE-EEETTT-TEEEEEEEETTT
T ss_pred EECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCC-CCceEEEC--CC-CCEEE-EEeCCC-CEEEEEEecCCC
Confidence 346666666665555578898887 554332 22111 11234443 32 23333 323322 233333334445
Q ss_pred CCeeeeccCCCCCcc---ccceeeeEEe-CCe-EEEEcc-CCeEEEEeCCCC-Cceeee-eCCC-CCCccccccccccee
Q 017173 190 TEWVTDNYQNRLPFV---SSIWNKLVFC-NGI-FYCLSL-TGWLGVFDPVKR-DWGVLV-VPPP-KCPENFFAKNWWKGK 260 (376)
Q Consensus 190 ~~W~~~~~~~~~p~~---~~~~~~~v~~-~G~-~Y~l~~-~~~i~~~D~~~~-~~~~~~-~p~p-~~~~~~~~~~~~~~~ 260 (376)
+.++........+.. ......+++- +|+ +|+... ++.|.+||++.. ....+. .+.. ..|. .
T Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~----------~ 290 (347)
T 3hfq_A 221 GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPR----------D 290 (347)
T ss_dssp TEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCC----------E
T ss_pred CceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcC----------e
Confidence 665543321111110 0112333332 676 676654 678999998732 333332 1110 0111 1
Q ss_pred EEEEECCcEEEEEEecCCCcEEEEEecCCccEEEee
Q 017173 261 FMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMK 296 (376)
Q Consensus 261 ~Lv~~~G~LllV~~~~~~~~~V~~ld~~~~~W~~v~ 296 (376)
..+.-+|+.+++.....+.+.||++|.++++-.++.
T Consensus 291 ~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 291 FDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred EEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 123345877767665567789999998877766554
No 59
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=70.85 E-value=61 Score=29.28 Aligned_cols=145 Identities=6% Similarity=-0.052 Sum_probs=77.3
Q ss_pred EEEEeecCcEEEEEcCCCCceEEeecCCCCCCeEE---E-ecCC----eEEEEeCC--CCeEEEE--cCCCcceecCCCc
Q 017173 82 LMYFPKFGNLYEFYDPAQRKTYSLELPELYGSRVC---Y-TKDS----WLLLYRPR--THRVFFF--NPFTRDMIKLPRF 149 (376)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~---~-s~~G----~ll~~~~~--~~~~~l~--NP~T~~~~~LP~~ 149 (376)
+++.+.......+||+.++....++...+ ..+- + .-+| +++..... .+.+.++ ||-++....+...
T Consensus 42 ~ii~t~k~~gL~Vydl~G~~l~~~~~g~~--nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~ 119 (355)
T 3amr_A 42 KLITTNKKSGLVVYSLDGKMLHSYNTGKL--NNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDP 119 (355)
T ss_dssp EEEEEETTTEEEEEETTSCEEEEECCSCE--EEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCT
T ss_pred EEEEEcCCCCEEEEcCCCcEEEEccCCCc--ccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecccc
Confidence 34444444567889997777776643211 1110 1 1122 34445544 5667776 9999887665221
Q ss_pred --------ccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeee--eccCCCCCccccceeeeEEe--CCe
Q 017173 150 --------ELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVT--DNYQNRLPFVSSIWNKLVFC--NGI 217 (376)
Q Consensus 150 --------~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~--~~~~~~~p~~~~~~~~~v~~--~G~ 217 (376)
...+. +++..++.++.+.++..+. .+....+.+.+.+++..+. +..- .++ .....+++- .|.
T Consensus 120 ~~pv~t~~~~pyG-lcly~~~~~g~~yafV~~k-~G~~~q~~l~~~~~g~~~~~lVR~f-~lg---sq~EgcvvDd~~g~ 193 (355)
T 3amr_A 120 DHPIATAINEVYG-FTLYHSQKTGKYYAMVTGK-EGEFEQYELKADKNGYISGKKVRAF-KMN---SQTEGMAADDEYGR 193 (355)
T ss_dssp TSCEECCCSSCCC-EEEEECTTTCCEEEEEECS-SSEEEEEEEEECTTSCEEEEEEEEE-ECS---SCEEEEEEETTTTE
T ss_pred ccCcCCCCCCeeE-EEEEecCCCCcEEEEEECC-CCeEEEEEEEeCCCCcccceEEEEe-cCC---CCcceEEEcCCCCe
Confidence 22333 4444456555555655443 2322334444445554432 2211 122 345566665 589
Q ss_pred EEEEccCCeEEEEeCCC
Q 017173 218 FYCLSLTGWLGVFDPVK 234 (376)
Q Consensus 218 ~Y~l~~~~~i~~~D~~~ 234 (376)
+|+-..+..|+.||.+.
T Consensus 194 Lyv~eEd~GIw~~da~p 210 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEP 210 (355)
T ss_dssp EEEEETTTEEEEEECST
T ss_pred EEEecccceEEEEeCCc
Confidence 99988877899999653
No 60
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=69.50 E-value=83 Score=30.31 Aligned_cols=122 Identities=11% Similarity=0.074 Sum_probs=63.0
Q ss_pred eeeEEeCCeEEEEcc-CCeEEEEeC-CCCC--ceeeeeCCCCCCccccccc-ccceeEEEEECCcEEEEEEecCCCcEEE
Q 017173 209 NKLVFCNGIFYCLSL-TGWLGVFDP-VKRD--WGVLVVPPPKCPENFFAKN-WWKGKFMVEHKGDILVIYTCCSENPIIF 283 (376)
Q Consensus 209 ~~~v~~~G~~Y~l~~-~~~i~~~D~-~~~~--~~~~~~p~p~~~~~~~~~~-~~~~~~Lv~~~G~LllV~~~~~~~~~V~ 283 (376)
..+++.+|.+|+.+. ++.|.++|. .++. |+.- .+.. .......+ .....-++..+|.|++.. .+-.|+
T Consensus 56 ~~P~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~v~v~~----~dg~l~ 128 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHK-PKQD--ASTKAVMCCDVVDRGLAYGAGQIVKKQ----ANGHLL 128 (571)
T ss_dssp SCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEEC-CCCC--GGGGGGCTTCSCCCCCEEETTEEEEEC----TTSEEE
T ss_pred cccEEECCEEEEEeCCCCEEEEEeCCCCccEEEEEc-CCCC--ccccccccccccccccEEECCEEEEEe----CCCEEE
Confidence 456788999999988 889999999 6654 6431 1110 00000000 000112233456555442 234688
Q ss_pred EEecCCc--cEEEeeccCCcEEEeeCCcccccCCCCccccCeEEEccccc---CCceEEEEecCCce
Q 017173 284 KLDQSKM--AWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRF---FGKRCISYSLNDSR 345 (376)
Q Consensus 284 ~ld~~~~--~W~~v~~lg~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~---~~~~~~vy~l~~~~ 345 (376)
.||.++. .|+.- +++.. ..... ...|-+.++.||+..... ....+.+||.++++
T Consensus 129 alD~~tG~~~W~~~--~~~~~----~~~~~--~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~ 187 (571)
T 2ad6_A 129 ALDAKTGKINWEVE--VCDPK----VGSTL--TQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGE 187 (571)
T ss_dssp EEETTTCCEEEEEE--CCCGG----GTCBC--CSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCC
T ss_pred EEECCCCCEEEEec--CCCCC----cccee--ccCCEEECCEEEEEecCCccCCCCEEEEEECCCCc
Confidence 8887654 46532 33211 00011 111334567888765321 13567788888775
No 61
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=69.15 E-value=71 Score=29.43 Aligned_cols=106 Identities=9% Similarity=-0.006 Sum_probs=54.1
Q ss_pred cCCeEEEEeCCCCeEEEEcCCCcceecCCCcccceeEEEeecCCCCCCeEEEEEeccCCC-eEEEEEEecCCCCee---e
Q 017173 119 KDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPT-VVAISTCHPGATEWV---T 194 (376)
Q Consensus 119 ~~G~ll~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~-~~~~~~y~~~~~~W~---~ 194 (376)
.+|.|++.+.. +.+..+|+-++....+-........++++ +. +. .+++.+...+. ...+..++. ++.|. .
T Consensus 148 ~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~~~~~P~~ia~d--~~-G~-~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~ 221 (430)
T 3tc9_A 148 NHNHLYLVGEQ-HPTRLIDFEKEYVSTVYSGLSKVRTICWT--HE-AD-SMIITNDQNNNDRPNNYILTR-ESGFKVITE 221 (430)
T ss_dssp EEEEEEEEEBT-EEEEEEETTTTEEEEEECCCSCEEEEEEC--TT-SS-EEEEEECCSCTTSEEEEEEEG-GGTSCSEEE
T ss_pred CCCeEEEEeCC-CcEEEEECCCCEEEEEecCCCCcceEEEe--CC-CC-EEEEEeCCCCcccceEEEEeC-CCceeeeee
Confidence 46778877765 57889999887654432211112234443 22 22 23333322111 122333332 33333 2
Q ss_pred eccCCCCCccccceeeeEEe--CCeEEEEcc-CCeEEEEeCCCCCc
Q 017173 195 DNYQNRLPFVSSIWNKLVFC--NGIFYCLSL-TGWLGVFDPVKRDW 237 (376)
Q Consensus 195 ~~~~~~~p~~~~~~~~~v~~--~G~~Y~l~~-~~~i~~~D~~~~~~ 237 (376)
+.. + ....++++. +|.+|+... .+.|..||+++...
T Consensus 222 l~~---~----~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 222 LTK---G----QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET 260 (430)
T ss_dssp EEE---C----SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE
T ss_pred ecc---C----CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE
Confidence 211 1 123344444 688998764 57899999987644
No 62
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=68.34 E-value=72 Score=29.15 Aligned_cols=115 Identities=12% Similarity=0.000 Sum_probs=64.1
Q ss_pred CCeEEEEccCCeEEEEeCCCCCceeee-eC--------CCCCCcccccccccceeEEEEEC-CcEEEEEEecC------C
Q 017173 215 NGIFYCLSLTGWLGVFDPVKRDWGVLV-VP--------PPKCPENFFAKNWWKGKFMVEHK-GDILVIYTCCS------E 278 (376)
Q Consensus 215 ~G~~Y~l~~~~~i~~~D~~~~~~~~~~-~p--------~p~~~~~~~~~~~~~~~~Lv~~~-G~LllV~~~~~------~ 278 (376)
+|+++|++..+.+.++|+.++.-.++. .. .-..|.+ .....+.-+ ++|++...... .
T Consensus 237 dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g-------~q~~a~~~~~~~lyV~~~~~~~~~hk~~ 309 (386)
T 3sjl_D 237 AGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGG-------WQQVAYHRALDRIYLLVDQRDEWRHKTA 309 (386)
T ss_dssp TTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECS-------SSCEEEETTTTEEEEEEEECCTTCTTSC
T ss_pred CCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCC-------cceeeECCCCCeEEEEeccccccccCCC
Confidence 899999999999999999876533221 00 0000111 112223323 55666554221 1
Q ss_pred CcEEEEEecCCccEEEeeccCCcEEEeeCCcccccCCCCccccCeEEEcccccCCceEEEEecCCceee
Q 017173 279 NPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRYY 347 (376)
Q Consensus 279 ~~~V~~ld~~~~~W~~v~~lg~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~~~~~~~vy~l~~~~~~ 347 (376)
.-.||.+|.++++-.+--.+|....=+ .++. . ..+.+|..+. ..+.+.|||.++++.-
T Consensus 310 ~~~V~viD~~t~kv~~~i~vg~~~~~l----avs~----D-~~~~ly~tn~--~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 310 SRFVVVLDAKTGERLAKFEMGHEIDSI----NVSQ----D-EKPLLYALST--GDKTLYIHDAESGEEL 367 (386)
T ss_dssp EEEEEEEETTTCCEEEEEEEEEEECEE----EECS----S-SSCEEEEEET--TTTEEEEEETTTCCEE
T ss_pred CCEEEEEECCCCeEEEEEECCCCcceE----EECC----C-CCeEEEEEcC--CCCeEEEEECCCCcEE
Confidence 257999999886555444444322101 1111 1 2346777764 4677899999998754
No 63
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=67.32 E-value=75 Score=29.00 Aligned_cols=213 Identities=8% Similarity=0.026 Sum_probs=97.3
Q ss_pred CCCCceEEEEeecCcEEEEEcCC--CCce-EEee---cCCCCCCeEEEecCCeEEEEeCCCCeEEEEcCCCcceec----
Q 017173 76 VNQSPWLMYFPKFGNLYEFYDPA--QRKT-YSLE---LPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIK---- 145 (376)
Q Consensus 76 ~~~~P~l~~~~~~~~~~~~~~~~--~~~~-~~~~---lp~~~~~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~~---- 145 (376)
.+...+|+..........+|+.. .++. ..+. .+. .-..+..+.+|-.++.......+.+++.-++....
T Consensus 111 s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~ 189 (450)
T 2vdu_B 111 TSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSK-RPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQE 189 (450)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSS-CEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCC
T ss_pred cCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCC-CceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccce
Confidence 34455654444333556778776 4433 2232 221 11122335555444443334578899887776542
Q ss_pred -CCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEeCCe-EEEEcc
Q 017173 146 -LPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGI-FYCLSL 223 (376)
Q Consensus 146 -LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~G~-~Y~l~~ 223 (376)
+.........+.++.++..+.+++.+- . .+ .+.+|+..++.-...-... . ......+.+.+|. ++....
T Consensus 190 ~~~~h~~~v~~~~~sp~~~~~~~l~s~~-~-d~---~i~vwd~~~~~~~~~~~~~-h---~~~v~~~~~sd~~~l~s~~~ 260 (450)
T 2vdu_B 190 PILGHVSMLTDVHLIKDSDGHQFIITSD-R-DE---HIKISHYPQCFIVDKWLFG-H---KHFVSSICCGKDYLLLSAGG 260 (450)
T ss_dssp CSEECSSCEEEEEEEECTTSCEEEEEEE-T-TS---CEEEEEESCTTCEEEECCC-C---SSCEEEEEECSTTEEEEEES
T ss_pred eeecccCceEEEEEcCCCCCCcEEEEEc-C-CC---cEEEEECCCCceeeeeecC-C---CCceEEEEECCCCEEEEEeC
Confidence 111111223345544321233443332 1 21 4567776655433211111 0 1224444444665 455566
Q ss_pred CCeEEEEeCCCCCc-eeeeeCC---CC------CCccccc----ccccceeEEEE-ECCcEEEEEEecCCCcEEEEE-ec
Q 017173 224 TGWLGVFDPVKRDW-GVLVVPP---PK------CPENFFA----KNWWKGKFMVE-HKGDILVIYTCCSENPIIFKL-DQ 287 (376)
Q Consensus 224 ~~~i~~~D~~~~~~-~~~~~p~---p~------~~~~~~~----~~~~~~~~Lv~-~~G~LllV~~~~~~~~~V~~l-d~ 287 (376)
++.|.+||+.+... ..+.... +. .+..+.. .....-..+.- .+|..+++....+..+.||.+ |.
T Consensus 261 d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~ 340 (450)
T 2vdu_B 261 DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEK 340 (450)
T ss_dssp SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSS
T ss_pred CCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccC
Confidence 88999999987653 2222100 00 0000000 00000111222 247777666656677899988 55
Q ss_pred CCccEEEeecc
Q 017173 288 SKMAWEEMKTL 298 (376)
Q Consensus 288 ~~~~W~~v~~l 298 (376)
....+..+..+
T Consensus 341 ~~~~l~~~~~~ 351 (450)
T 2vdu_B 341 QKGDLALKQII 351 (450)
T ss_dssp STTCEEEEEEE
T ss_pred CCCceeeccEe
Confidence 55666666655
No 64
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=64.61 E-value=1.2e+02 Score=30.29 Aligned_cols=136 Identities=10% Similarity=0.006 Sum_probs=68.6
Q ss_pred EEEEcCCCCceEEeecCC---CCCCe---EEEecCCeEEEEeCCCCeEEEEcCCCcceecCCCc---ccceeEEEeecCC
Q 017173 92 YEFYDPAQRKTYSLELPE---LYGSR---VCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRF---ELTYQIVAFSCAP 162 (376)
Q Consensus 92 ~~~~~~~~~~~~~~~lp~---~~~~~---~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~~LP~~---~~~~~~~~l~~~p 162 (376)
...|++.++++..+.... ..... +.....|-|.+.... ..++.+||-+++...+... +... ...+..++
T Consensus 471 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~-~Gl~~~~~~~~~~~~~~~~~~l~~~~-i~~i~~d~ 548 (781)
T 3v9f_A 471 VFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG-GGVGIYTPDMQLVRKFNQYEGFCSNT-INQIYRSS 548 (781)
T ss_dssp EEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS-SCEEEECTTCCEEEEECTTTTCSCSC-EEEEEECT
T ss_pred eEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcC-CCEEEEeCCCCeEEEccCCCCCCCCe-eEEEEECC
Confidence 345666666554443211 11122 223456777766542 2688899988876554321 1111 11111221
Q ss_pred CCCCeEEEEEeccCCCeEEE-EEEecCCCCeeeeccCCCCCccccceeeeEEe-CCeEEEEccCCeEEEEeCCCCCceee
Q 017173 163 TSSSCVVFTVKHISPTVVAI-STCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NGIFYCLSLTGWLGVFDPVKRDWGVL 240 (376)
Q Consensus 163 ~~~~~~v~~i~~~~~~~~~~-~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G~~Y~l~~~~~i~~~D~~~~~~~~~ 240 (376)
. ..+ ++.... .+ ..|++.+++++.......++. ..+..++.- +|.+++-+. ..|..||+.++.+...
T Consensus 549 ~--g~l--Wi~T~~----Glv~~~d~~~~~~~~~~~~~gl~~--~~i~~i~~d~~g~lW~~t~-~Gl~~~~~~~~~~~~~ 617 (781)
T 3v9f_A 549 K--GQM--WLATGE----GLVCFPSARNFDYQVFQRKEGLPN--THIRAISEDKNGNIWASTN-TGISCYITSKKCFYTY 617 (781)
T ss_dssp T--SCE--EEEETT----EEEEESCTTTCCCEEECGGGTCSC--CCCCEEEECSSSCEEEECS-SCEEEEETTTTEEEEE
T ss_pred C--CCE--EEEECC----CceEEECCCCCcEEEccccCCCCC--ceEEEEEECCCCCEEEEcC-CceEEEECCCCceEEe
Confidence 1 112 222211 24 667787777776654333441 223333332 578876664 4599999998776554
No 65
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=64.31 E-value=72 Score=27.70 Aligned_cols=53 Identities=13% Similarity=0.169 Sum_probs=31.9
Q ss_pred EEEEEecCCCCeeeeccCCCCCccccceeeeEEeC---C-eEEEEccCCeEEEEeCCCCC
Q 017173 181 AISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCN---G-IFYCLSLTGWLGVFDPVKRD 236 (376)
Q Consensus 181 ~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~---G-~~Y~l~~~~~i~~~D~~~~~ 236 (376)
.+.+|+..++.|......... ......+.+.. | .++....++.|.+||+....
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVH---SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG 136 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCC---SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTS
T ss_pred EEEEEEcCCCceeEeeeecCC---CcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCC
Confidence 466787777777654432111 12344444442 3 45566678899999998763
No 66
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=64.27 E-value=81 Score=28.27 Aligned_cols=222 Identities=9% Similarity=0.047 Sum_probs=102.5
Q ss_pred cEEEEEcCCCCceE-EeecCCCCCCeEEEecCC-eEEEEeCCCCeEEEEcCCCcceecCCCcccceeEEEeecCCCCCCe
Q 017173 90 NLYEFYDPAQRKTY-SLELPELYGSRVCYTKDS-WLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSC 167 (376)
Q Consensus 90 ~~~~~~~~~~~~~~-~~~lp~~~~~~~~~s~~G-~ll~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~l~~~p~~~~~ 167 (376)
....++|+...+.. .+.........+..+.+| .++......+.+.++|+-+++.+..-+.......++++ |. +.+
T Consensus 191 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~--~~-g~~ 267 (433)
T 3bws_A 191 NAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLS--KD-GKE 267 (433)
T ss_dssp TEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEEC--TT-SSE
T ss_pred CEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEc--CC-CCE
Confidence 34556776665432 233111111122234444 55555544458999999998765432222222233443 32 234
Q ss_pred EEEEEeccCC---CeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEe-CC-eEEEE-ccCCeEEEEeCCCCCceeee
Q 017173 168 VVFTVKHISP---TVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NG-IFYCL-SLTGWLGVFDPVKRDWGVLV 241 (376)
Q Consensus 168 ~v~~i~~~~~---~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G-~~Y~l-~~~~~i~~~D~~~~~~~~~~ 241 (376)
++++-..... ....+.+|+..++.-....... .....+.+. +| .+|+. ..++.|.+||+.+..... .
T Consensus 268 l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~------~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~-~ 340 (433)
T 3bws_A 268 LYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP------GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQK-S 340 (433)
T ss_dssp EEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE------ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEE-E
T ss_pred EEEEECCCCccccCCCeEEEEECCCCcEEeeccCC------CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEE-E
Confidence 3333221100 1236778887765332211100 112233333 45 56666 457889999998654211 1
Q ss_pred eCCCCCCcccccccccceeEEEEECCcEEEEEEecCCCc------------EEEEEecCCccEEEeeccCCcEEEeeCCc
Q 017173 242 VPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENP------------IIFKLDQSKMAWEEMKTLDGLTLFASFLS 309 (376)
Q Consensus 242 ~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~~~------------~V~~ld~~~~~W~~v~~lg~~~lFlg~~~ 309 (376)
.+.. .. .....+..+|+.+++........ .|+.+|.++.+.......++...
T Consensus 341 ~~~~---~~-------~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~------ 404 (433)
T 3bws_A 341 IPVF---DK-------PNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPT------ 404 (433)
T ss_dssp EECS---SS-------EEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEE------
T ss_pred ecCC---CC-------CCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCc------
Confidence 1111 10 01112223577666665443322 66666776654433322222111
Q ss_pred ccccCCCCccccCeEEEcccccCCceEEEEecCC
Q 017173 310 SQSRADLPGIMRNSVYFSKVRFFGKRCISYSLND 343 (376)
Q Consensus 310 s~~~~~~~g~~~n~Iyf~~~~~~~~~~~vy~l~~ 343 (376)
++... + .++.+|.... .++.+.+|+++.
T Consensus 405 ~~~~s--~--dg~~l~~~~~--~d~~i~v~~~~~ 432 (433)
T 3bws_A 405 GLDVS--P--DNRYLVISDF--LDHQIRVYRRDG 432 (433)
T ss_dssp EEEEC--T--TSCEEEEEET--TTTEEEEEEETT
T ss_pred eEEEc--C--CCCEEEEEEC--CCCeEEEEEecC
Confidence 11110 1 3566776653 356677888763
No 67
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=64.12 E-value=86 Score=28.56 Aligned_cols=113 Identities=9% Similarity=0.026 Sum_probs=59.5
Q ss_pred ecCCeEEEEeCCCCeEEEEcCCCcceecCCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCC-eeeec
Q 017173 118 TKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATE-WVTDN 196 (376)
Q Consensus 118 s~~G~ll~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~-W~~~~ 196 (376)
..+|-|++.+...+.+.++|+-++....+......-. ++++ +.. . .++..+..... .+..++..++. .....
T Consensus 139 d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~--~~g-~-~l~~~d~~~~~--~I~~~d~~~~~~~~~~g 211 (409)
T 3hrp_A 139 VGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVT--KDK-Q-RVYSIGWEGTH--TVYVYMKASGWAPTRIG 211 (409)
T ss_dssp CSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEEC--TTS-S-EEEEEBSSTTC--EEEEEEGGGTTCEEEEE
T ss_pred eCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEe--cCC-C-cEEEEecCCCc--eEEEEEcCCCceeEEee
Confidence 5678888887765689999999887654422211111 3332 222 2 23333322211 45566654321 22221
Q ss_pred cCCCCCccccceeeeEEe--CCeEEEEccCCeEEEEeCCCCCcee
Q 017173 197 YQNRLPFVSSIWNKLVFC--NGIFYCLSLTGWLGVFDPVKRDWGV 239 (376)
Q Consensus 197 ~~~~~p~~~~~~~~~v~~--~G~~Y~l~~~~~i~~~D~~~~~~~~ 239 (376)
... +.......++++. +|.+|+....+.|..||+.+.....
T Consensus 212 ~~~--~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~ 254 (409)
T 3hrp_A 212 QLG--STFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTL 254 (409)
T ss_dssp ECC--TTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEE
T ss_pred ecc--chhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEE
Confidence 100 0001223445554 6899997777889999998765433
No 68
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=62.93 E-value=72 Score=27.21 Aligned_cols=103 Identities=11% Similarity=0.079 Sum_probs=50.4
Q ss_pred ecCCeEEEEeCCCCeEEEEcCCCccee-cCCCcc-cceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEec-CCCCeee
Q 017173 118 TKDSWLLLYRPRTHRVFFFNPFTRDMI-KLPRFE-LTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHP-GATEWVT 194 (376)
Q Consensus 118 s~~G~ll~~~~~~~~~~l~NP~T~~~~-~LP~~~-~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~-~~~~W~~ 194 (376)
|+-|-++........+.++|+.||+.+ .++... .....+.+.. . +.. ++. .. ..+..+++ |.-.|+.
T Consensus 2 ~~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~p--d-G~i-lvs-~~-----~~V~~~d~~G~~~W~~ 71 (276)
T 3no2_A 2 SSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATK--A-GEI-LFS-YS-----KGAKMITRDGRELWNI 71 (276)
T ss_dssp -CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECT--T-SCE-EEE-CB-----SEEEEECTTSCEEEEE
T ss_pred CCCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECC--C-CCE-EEe-CC-----CCEEEECCCCCEEEEE
Confidence 444455555555568999999999854 233221 1112233332 1 222 221 11 13566676 2335774
Q ss_pred eccCCCCCccccceeeeEEeCCeEEEEcc--CCeEEEEeCCCC
Q 017173 195 DNYQNRLPFVSSIWNKLVFCNGIFYCLSL--TGWLGVFDPVKR 235 (376)
Q Consensus 195 ~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~--~~~i~~~D~~~~ 235 (376)
.... .. ........-+|.+++... .+.++.+|++.+
T Consensus 72 ~~~~-~~----~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk 109 (276)
T 3no2_A 72 AAPA-GC----EMQTARILPDGNALVAWCGHPSTILEVNMKGE 109 (276)
T ss_dssp ECCT-TC----EEEEEEECTTSCEEEEEESTTEEEEEECTTSC
T ss_pred cCCC-Cc----cccccEECCCCCEEEEecCCCCEEEEEeCCCC
Confidence 3311 01 111223445777766543 567888888654
No 69
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=61.98 E-value=1.3e+02 Score=29.89 Aligned_cols=52 Identities=13% Similarity=0.171 Sum_probs=31.7
Q ss_pred EEEEEecCCCCeeeeccCCCCCccccceeeeEEeC---C-eEEEEccCCeEEEEeCCCC
Q 017173 181 AISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCN---G-IFYCLSLTGWLGVFDPVKR 235 (376)
Q Consensus 181 ~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~---G-~~Y~l~~~~~i~~~D~~~~ 235 (376)
.+.+|+..++.|......... ......+.+.. | .++..+.++.|.+||+.+.
T Consensus 78 ~I~vwd~~~~~~~~~~~~~~h---~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVHAVH---SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp CEEEEEEETTEEEEEEEECCC---SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred eEEEEECCCCcccccccccCC---CCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 466788777777654432111 13344555542 4 4555667899999999875
No 70
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=61.39 E-value=77 Score=27.05 Aligned_cols=95 Identities=7% Similarity=-0.016 Sum_probs=50.4
Q ss_pred EEEEEecCCCCeeeeccCCCCCccccceeeeEEe-CCeEEEEccCCeEEEEeCCCCCceeeeeCCCCCCcccccccccce
Q 017173 181 AISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NGIFYCLSLTGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKG 259 (376)
Q Consensus 181 ~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G~~Y~l~~~~~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~ 259 (376)
.+..|++.++.-.....+ .....+++. +|.+|+- ....|..||++++.++.+.......+.. ...
T Consensus 36 ~i~~~d~~~~~~~~~~~~-------~~~~~i~~~~dG~l~v~-~~~~l~~~d~~~g~~~~~~~~~~~~~~~------~~~ 101 (297)
T 3g4e_A 36 KVCRWDSFTKQVQRVTMD-------APVSSVALRQSGGYVAT-IGTKFCALNWKEQSAVVLATVDNDKKNN------RFN 101 (297)
T ss_dssp EEEEEETTTCCEEEEECS-------SCEEEEEEBTTSSEEEE-ETTEEEEEETTTTEEEEEEECCTTCSSE------EEE
T ss_pred EEEEEECCCCcEEEEeCC-------CceEEEEECCCCCEEEE-ECCeEEEEECCCCcEEEEEecCCCCCCC------CCC
Confidence 466777776654433321 112333333 6786554 4668999999987766543322111111 011
Q ss_pred eEEEEECCcEEEEEEecC--------CCcEEEEEecCC
Q 017173 260 KFMVEHKGDILVIYTCCS--------ENPIIFKLDQSK 289 (376)
Q Consensus 260 ~~Lv~~~G~LllV~~~~~--------~~~~V~~ld~~~ 289 (376)
...+..+|++++...... ..-.||++|...
T Consensus 102 di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 102 DGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp EEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred CEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 122344688776554321 235799998753
No 71
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=61.11 E-value=1.4e+02 Score=30.10 Aligned_cols=112 Identities=11% Similarity=0.059 Sum_probs=55.3
Q ss_pred eeeeEEe--CCeEEEEcc--CCeEEEEeCCCCCceeeeeCCCCCCcccccccccceeEE-EE-ECCcEEEEEEecCCCcE
Q 017173 208 WNKLVFC--NGIFYCLSL--TGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFM-VE-HKGDILVIYTCCSENPI 281 (376)
Q Consensus 208 ~~~~v~~--~G~~Y~l~~--~~~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~L-v~-~~G~LllV~~~~~~~~~ 281 (376)
..++++- +|.+||... ...|.+++++...-..+.......| .-| +. .+|+||++.. ..-.
T Consensus 516 P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P-----------~GLavD~~~~~LYwaD~---~~~~ 581 (791)
T 3m0c_C 516 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP-----------NGITLDLLSGRLYWVDS---KLHS 581 (791)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCE-----------EEEEEETTTTEEEEEET---TTTE
T ss_pred cceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCc-----------eEEEEecCCCeEEEEeC---CCCc
Confidence 4456663 689999874 3679999998754433321111111 123 33 3577777642 2335
Q ss_pred EEEEecCCccEEEeeccCCcEEEeeCCcccccCCCCccccCeEEEcccccCCceEEEEecCCc
Q 017173 282 IFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDS 344 (376)
Q Consensus 282 V~~ld~~~~~W~~v~~lg~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~~~~~~~vy~l~~~ 344 (376)
|+++|.++.. +..++.....+..+--..+.++.||+++. ..+.+.+++..++
T Consensus 582 I~~~d~dG~~---------~~~v~~~~~~l~~P~glav~~~~lYwtD~--~~~~I~~~dk~tG 633 (791)
T 3m0c_C 582 ISSIDVNGGN---------RKTILEDEKRLAHPFSLAVFEDKVFWTDI--INEAIFSANRLTG 633 (791)
T ss_dssp EEEEETTSCS---------CEEEEECTTTTSSEEEEEEETTEEEEEET--TTTEEEEEETTTC
T ss_pred EEEEecCCCc---------eEEEecCCCccCCCCEEEEeCCEEEEEEC--CCCEEEEEeCCCC
Confidence 6666655421 11122111111000001135678888875 3455556665444
No 72
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=60.66 E-value=74 Score=26.65 Aligned_cols=174 Identities=10% Similarity=0.024 Sum_probs=81.7
Q ss_pred EEEEEcCCCCceEEeecCCCCC-CeEEEecCCeEEEEeCCCCeEEEEcCCCcceecCCCcc--cceeEEEeecCCCCCCe
Q 017173 91 LYEFYDPAQRKTYSLELPELYG-SRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFE--LTYQIVAFSCAPTSSSC 167 (376)
Q Consensus 91 ~~~~~~~~~~~~~~~~lp~~~~-~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~~LP~~~--~~~~~~~l~~~p~~~~~ 167 (376)
....|++.......+..+.... ..+....+|-+++.+.....+.++|+-......+.... .....++++ +. +.
T Consensus 101 ~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~--~~-g~- 176 (286)
T 1q7f_A 101 QIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVN--DK-QE- 176 (286)
T ss_dssp EEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEEC--SS-SE-
T ss_pred EEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEEC--CC-CC-
Confidence 4455665444333343332211 12333567777777655567999997544333332111 111234443 22 12
Q ss_pred EEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEE-eCCeEEEEccC-C-eEEEEeCCCCCceeeeeCC
Q 017173 168 VVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVF-CNGIFYCLSLT-G-WLGVFDPVKRDWGVLVVPP 244 (376)
Q Consensus 168 ~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~-~~G~~Y~l~~~-~-~i~~~D~~~~~~~~~~~p~ 244 (376)
++..+.... .+.+|+.....-..+.....+ .....+++ -+|.+|+.+.. + .|.+||.+......+....
T Consensus 177 -l~v~~~~~~---~i~~~~~~g~~~~~~~~~g~~----~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~ 248 (286)
T 1q7f_A 177 -IFISDNRAH---CVKVFNYEGQYLRQIGGEGIT----NYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKV 248 (286)
T ss_dssp -EEEEEGGGT---EEEEEETTCCEEEEESCTTTS----CSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESS
T ss_pred -EEEEECCCC---EEEEEcCCCCEEEEEccCCcc----CCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccC
Confidence 333332221 466777644322222211111 12233333 26889888764 3 8999997754333333211
Q ss_pred CCCCcccccccccceeEEEEECCcEEEEEEecCCCcEEEEEec
Q 017173 245 PKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQ 287 (376)
Q Consensus 245 p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~~~~V~~ld~ 287 (376)
.. .. .....+..+|.|++.. .+..+.||+++.
T Consensus 249 ~~-~~--------~~~i~~~~~g~l~vs~--~~~~v~v~~~~~ 280 (286)
T 1q7f_A 249 KH-AQ--------CFDVALMDDGSVVLAS--KDYRLYIYRYVQ 280 (286)
T ss_dssp CC-SC--------EEEEEEETTTEEEEEE--TTTEEEEEECSC
T ss_pred CC-Cc--------ceeEEECCCCcEEEEC--CCCeEEEEEccc
Confidence 10 00 0112234468876662 456688887654
No 73
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=59.75 E-value=82 Score=26.86 Aligned_cols=244 Identities=10% Similarity=0.042 Sum_probs=110.5
Q ss_pred CceEEEEeecCcEEEEEcCC--CCceEE---eecCCCCCCeEEEecCC-eEEEEeCCCCeEEEEcC---CCcceec-CCC
Q 017173 79 SPWLMYFPKFGNLYEFYDPA--QRKTYS---LELPELYGSRVCYTKDS-WLLLYRPRTHRVFFFNP---FTRDMIK-LPR 148 (376)
Q Consensus 79 ~P~l~~~~~~~~~~~~~~~~--~~~~~~---~~lp~~~~~~~~~s~~G-~ll~~~~~~~~~~l~NP---~T~~~~~-LP~ 148 (376)
...|+..........+|+.. +++... ++.+. ....+..+.+| .|+........+.+++. .+++.+. ++.
T Consensus 49 g~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 127 (343)
T 1ri6_A 49 KRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG 127 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC
T ss_pred CCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC
Confidence 34444333222456666665 444332 23333 22333445555 45555544457888888 3333222 221
Q ss_pred cccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCC-CCeeeec--cCCCCCccccceeeeEEe-CCe-EEEEc-
Q 017173 149 FELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGA-TEWVTDN--YQNRLPFVSSIWNKLVFC-NGI-FYCLS- 222 (376)
Q Consensus 149 ~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~-~~W~~~~--~~~~~p~~~~~~~~~v~~-~G~-~Y~l~- 222 (376)
.. ....++++ |. +.+++++ ....+ .+.+|+..+ +...... ... .+. ......+++. +|. +|+..
T Consensus 128 ~~-~~~~~~~s--~d-g~~l~~~-~~~~~---~v~~~d~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~pdg~~l~~~~~ 197 (343)
T 1ri6_A 128 LD-GCHSANIS--PD-NRTLWVP-ALKQD---RICLFTVSDDGHLVAQDPAEVT-TVE-GAGPRHMVFHPNEQYAYCVNE 197 (343)
T ss_dssp CT-TBCCCEEC--TT-SSEEEEE-EGGGT---EEEEEEECTTSCEEEEEEEEEE-CST-TCCEEEEEECTTSSEEEEEET
T ss_pred CC-CceEEEEC--CC-CCEEEEe-cCCCC---EEEEEEecCCCceeeecccccc-cCC-CCCcceEEECCCCCEEEEEeC
Confidence 11 11123333 22 2333322 31221 466777665 5554322 100 110 0122333333 565 67665
Q ss_pred cCCeEEEEeCCC--CCceeee-e-CCCCCCccccccccccee-EE-EEECCcEEEEEEecCCCcEEEEEecCCccEEEee
Q 017173 223 LTGWLGVFDPVK--RDWGVLV-V-PPPKCPENFFAKNWWKGK-FM-VEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMK 296 (376)
Q Consensus 223 ~~~~i~~~D~~~--~~~~~~~-~-p~p~~~~~~~~~~~~~~~-~L-v~~~G~LllV~~~~~~~~~V~~ld~~~~~W~~v~ 296 (376)
.++.|.+||++. ..+.... . ..+. .+... ... .+ +.-+|+.+++....+..+.||.++.++.++..+.
T Consensus 198 ~~~~i~~~~~~~~~g~~~~~~~~~~~~~---~~~~~---~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~ 271 (343)
T 1ri6_A 198 LNSSVDVWELKDPHGNIECVQTLDMMPE---NFSDT---RWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEG 271 (343)
T ss_dssp TTTEEEEEESSCTTSCCEEEEEEECSCT---TCCSC---CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEE
T ss_pred CCCEEEEEEecCCCCcEEEEeeccccCc---ccccc---CCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEee
Confidence 467899999954 3333221 1 1111 10000 111 12 2234776666554556688888876566666665
Q ss_pred ccCCcEEEeeCCcccccCCCCccccCeEEEcccccCCceEEEE--ecCCceeecC
Q 017173 297 TLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKRCISY--SLNDSRYYPR 349 (376)
Q Consensus 297 ~lg~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~~~~~~~vy--~l~~~~~~~~ 349 (376)
.++... .-..+.. .-.++.+|+... ..+.+.+| +.+++++...
T Consensus 272 ~~~~~~----~~~~~~~----s~dg~~l~~~~~--~~~~v~v~~~d~~~g~~~~~ 316 (343)
T 1ri6_A 272 FQPTET----QPRGFNV----DHSGKYLIAAGQ--KSHHISVYEIVGEQGLLHEK 316 (343)
T ss_dssp EEECSS----SCCCEEE----CTTSSEEEEECT--TTCEEEEEEEETTTTEEEEE
T ss_pred eecCCC----ccceEEE----CCCCCEEEEecC--CCCeEEEEEEcCCCceeeEc
Confidence 443210 0001111 013667888774 34566777 4456665543
No 74
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=56.97 E-value=96 Score=26.77 Aligned_cols=117 Identities=13% Similarity=0.114 Sum_probs=59.1
Q ss_pred eeeEEe--CCeEEEEccCCeEEEEeCCCCCceeeeeCCCCCCcccccccccceeEEEEE-CCcEEEEEEec---------
Q 017173 209 NKLVFC--NGIFYCLSLTGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEH-KGDILVIYTCC--------- 276 (376)
Q Consensus 209 ~~~v~~--~G~~Y~l~~~~~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~-~G~LllV~~~~--------- 276 (376)
..+++. +|.+|+.+..+.|..+|+.++..+.+.......+.. ...-..+.. +|.|++.....
T Consensus 83 ~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~------~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~ 156 (322)
T 2fp8_A 83 YDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFK------WLYAVTVDQRTGIVYFTDVSTLYDDRGVQQ 156 (322)
T ss_dssp EEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECS------CEEEEEECTTTCCEEEEESCSSCCTTCHHH
T ss_pred ceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCccc------ccceEEEecCCCEEEEECCcccccccccce
Confidence 445555 689998877677999998865444332111000000 011133445 68887765421
Q ss_pred -----CCCcEEEEEecCCccEEEeeccCCcEEEeeCCcccccCCCCccccCeEEEcccccCCceEEEEecCC
Q 017173 277 -----SENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLND 343 (376)
Q Consensus 277 -----~~~~~V~~ld~~~~~W~~v~~lg~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~~~~~~~vy~l~~ 343 (376)
...-.|+++|.++.+...+.. -+...+ .+.. .-.++.+|+.+. ..+.+.+|+++.
T Consensus 157 ~~~~~~~~g~v~~~d~~~~~~~~~~~-----~~~~p~-gia~----~~dg~~lyv~d~--~~~~I~~~~~~~ 216 (322)
T 2fp8_A 157 IMDTSDKTGRLIKYDPSTKETTLLLK-----ELHVPG-GAEV----SADSSFVLVAEF--LSHQIVKYWLEG 216 (322)
T ss_dssp HHHHTCCCEEEEEEETTTTEEEEEEE-----EESCCC-EEEE----CTTSSEEEEEEG--GGTEEEEEESSS
T ss_pred ehcccCCCceEEEEeCCCCEEEEecc-----CCccCc-ceEE----CCCCCEEEEEeC--CCCeEEEEECCC
Confidence 112458888877654433211 000000 0000 013556888875 345677888774
No 75
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=55.97 E-value=1.7e+02 Score=29.19 Aligned_cols=136 Identities=13% Similarity=0.083 Sum_probs=70.8
Q ss_pred EEEEcCCCCceEEeecCCCCCCeE---EEecCCeEEEEeCCCCeEEEEcCCCcceecCCCcc-----cceeEEEeecCCC
Q 017173 92 YEFYDPAQRKTYSLELPELYGSRV---CYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFE-----LTYQIVAFSCAPT 163 (376)
Q Consensus 92 ~~~~~~~~~~~~~~~lp~~~~~~~---~~s~~G~ll~~~~~~~~~~l~NP~T~~~~~LP~~~-----~~~~~~~l~~~p~ 163 (376)
...|++.++++..+..+.+....+ +-..+|-|.+... ..++++||-|+++..++... .... ..+..++
T Consensus 429 l~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i-~~i~~d~- 504 (781)
T 3v9f_A 429 ISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH--AGVFVIDLASKKVIHHYDTSNSQLLENFV-RSIAQDS- 504 (781)
T ss_dssp EEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET--TEEEEEESSSSSCCEEECTTTSSCSCSCE-EEEEECT-
T ss_pred EEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC--CceEEEeCCCCeEEecccCccccccccee-EEEEEcC-
Confidence 344566666655544322222222 2244677777665 37999999998765443221 1111 1122222
Q ss_pred CCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEE-eCCeEEEEccCCeE-EEEeCCCCCceee
Q 017173 164 SSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVF-CNGIFYCLSLTGWL-GVFDPVKRDWGVL 240 (376)
Q Consensus 164 ~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~-~~G~~Y~l~~~~~i-~~~D~~~~~~~~~ 240 (376)
.+. + ++..... .+..|++.++.++.......++ ......+.. -+|.+++-+. +.| ..||+.++.+..+
T Consensus 505 ~g~-l--Wigt~~~---Gl~~~~~~~~~~~~~~~~~~l~--~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~~~ 574 (781)
T 3v9f_A 505 EGR-F--WIGTFGG---GVGIYTPDMQLVRKFNQYEGFC--SNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDYQVF 574 (781)
T ss_dssp TCC-E--EEEESSS---CEEEECTTCCEEEEECTTTTCS--CSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCCEEE
T ss_pred CCC-E--EEEEcCC---CEEEEeCCCCeEEEccCCCCCC--CCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcEEEc
Confidence 112 2 2222212 2556787777777665433343 122333322 2678877666 557 9999998877554
No 76
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=55.74 E-value=89 Score=26.03 Aligned_cols=209 Identities=9% Similarity=-0.018 Sum_probs=98.8
Q ss_pred cCCeEEEEeCCCCeEEEEcCCCcceecC-CCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeecc
Q 017173 119 KDSWLLLYRPRTHRVFFFNPFTRDMIKL-PRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNY 197 (376)
Q Consensus 119 ~~G~ll~~~~~~~~~~l~NP~T~~~~~L-P~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~ 197 (376)
.+|.|+..+...+.+.++++-++....+ +.-......+++.. .. . .+++.+... + .+.+++.....-+.+..
T Consensus 46 ~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~--~~-~-~lyv~d~~~-~--~I~~~~~~g~~~~~~~~ 118 (267)
T 1npe_A 46 VDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDH--LG-R-TIFWTDSQL-D--RIEVAKMDGTQRRVLFD 118 (267)
T ss_dssp TTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEET--TT-T-EEEEEETTT-T--EEEEEETTSCSCEEEEC
T ss_pred CCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEe--cC-C-eEEEEECCC-C--EEEEEEcCCCCEEEEEE
Confidence 3678888876666899999877643222 21101112344432 11 2 233333322 1 45566654322222211
Q ss_pred CCCCCccccceeeeEEe--CCeEEEEccC---CeEEEEeCCCCCceeeeeCCCCCCcccccccccceeEEEEEC-CcEEE
Q 017173 198 QNRLPFVSSIWNKLVFC--NGIFYCLSLT---GWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHK-GDILV 271 (376)
Q Consensus 198 ~~~~p~~~~~~~~~v~~--~G~~Y~l~~~---~~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~-G~Lll 271 (376)
..+ ....++++. +|.+|+.... +.|.+++++...-..+.......|.+ .-+..+ +.|++
T Consensus 119 -~~~----~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~g----------ia~d~~~~~lyv 183 (267)
T 1npe_A 119 -TGL----VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNG----------LTFDAFSSQLCW 183 (267)
T ss_dssp -SSC----SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEE----------EEEETTTTEEEE
T ss_pred -CCC----CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcE----------EEEcCCCCEEEE
Confidence 111 224455655 6899998753 67999998865433332111111111 122333 44554
Q ss_pred EEEecCCCcEEEEEecCCccEEEeeccCCcEEEeeCCcccccCCCCccccCeEEEcccccCCceEEEEecCCceee-cCC
Q 017173 272 IYTCCSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRYY-PRK 350 (376)
Q Consensus 272 V~~~~~~~~~V~~ld~~~~~W~~v~~lg~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~~~~~~~vy~l~~~~~~-~~~ 350 (376)
... ... .|+++|.++..-..+ +-+....... .+.++.+|+++. ..+.+.+++.++++.. .+.
T Consensus 184 ~d~-~~~--~I~~~~~~g~~~~~~--------~~~~~~P~gi----~~d~~~lyva~~--~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 184 VDA-GTH--RAECLNPAQPGRRKV--------LEGLQYPFAV----TSYGKNLYYTDW--KTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp EET-TTT--EEEEEETTEEEEEEE--------EECCCSEEEE----EEETTEEEEEET--TTTEEEEEETTTTEEEEEEC
T ss_pred EEC-CCC--EEEEEecCCCceEEE--------ecCCCCceEE----EEeCCEEEEEEC--CCCeEEEEeCCCCCceEEEc
Confidence 443 223 455566654321111 1011000000 124688999886 4567889999987643 221
Q ss_pred CCCccCCCCCCCceeEeCCC
Q 017173 351 QCYDWGEQDPFENIWIEPPE 370 (376)
Q Consensus 351 ~~~~~~~~~~~~~~w~~P~~ 370 (376)
.+ .......+.+.|..
T Consensus 247 -~g---~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 247 -PH---KQTRLYGITIALSQ 262 (267)
T ss_dssp -CS---SCCCCCCEEEECSC
T ss_pred -cc---cccccceeeecCcc
Confidence 12 11123456777654
No 77
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=55.03 E-value=1.1e+02 Score=26.73 Aligned_cols=124 Identities=12% Similarity=0.059 Sum_probs=66.8
Q ss_pred eeEEe-CCe-EEEEc-cCCeEEEEeCCCCCceeeeeCCCCCCcccccccccceeEE-EEECCcEEEEEEec-CCCcEEEE
Q 017173 210 KLVFC-NGI-FYCLS-LTGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFM-VEHKGDILVIYTCC-SENPIIFK 284 (376)
Q Consensus 210 ~~v~~-~G~-~Y~l~-~~~~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~L-v~~~G~LllV~~~~-~~~~~V~~ 284 (376)
.+++. +|+ +|+.. ..+.|.+||+.++....+... +..+.... ....+ +.-+|+.+.+.... .+.+.||.
T Consensus 215 ~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~-~~~~~~~~-----~~~~i~~spdg~~l~v~~~~~~~~i~v~~ 288 (361)
T 3scy_A 215 HLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTV-AADTVNAQ-----GSGDIHLSPDGKYLYASNRLKADGVAIFK 288 (361)
T ss_dssp EEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEE-ESCSSCCC-----CEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred EEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEE-ecCCCCCC-----CcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence 34443 675 77766 367899999986655433210 01111100 11122 23368876666555 56799999
Q ss_pred EecCCccEEEeeccCCcEEEeeCC-cccccCCCCccccCeEEEcccccCCceEEEE--ecCCceeecCC
Q 017173 285 LDQSKMAWEEMKTLDGLTLFASFL-SSQSRADLPGIMRNSVYFSKVRFFGKRCISY--SLNDSRYYPRK 350 (376)
Q Consensus 285 ld~~~~~W~~v~~lg~~~lFlg~~-~s~~~~~~~g~~~n~Iyf~~~~~~~~~~~vy--~l~~~~~~~~~ 350 (376)
+|.++.++..+..+.. |.. ..+... + .++.||+... ..+.+.+| |.++++.....
T Consensus 289 ~~~~~g~~~~~~~~~~-----g~~~~~~~~s--p--dg~~l~~~~~--~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 289 VDETNGTLTKVGYQLT-----GIHPRNFIIT--P--NGKYLLVACR--DTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp ECTTTCCEEEEEEEEC-----SSCCCEEEEC--T--TSCEEEEEET--TTTEEEEEEECTTTCCEEECS
T ss_pred EcCCCCcEEEeeEecC-----CCCCceEEEC--C--CCCEEEEEEC--CCCCEEEEEEECCCCcEeecc
Confidence 9877777776655432 110 011111 1 3667888875 34566675 44577766543
No 78
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=54.43 E-value=99 Score=26.16 Aligned_cols=134 Identities=16% Similarity=0.140 Sum_probs=75.2
Q ss_pred EEEEEcCCCCceE-EeecCCCCCCeEEEecCCeEEEEeCCCCeEEEEcCCCccee-cCCCcccceeEEEeecCCCCCCeE
Q 017173 91 LYEFYDPAQRKTY-SLELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMI-KLPRFELTYQIVAFSCAPTSSSCV 168 (376)
Q Consensus 91 ~~~~~~~~~~~~~-~~~lp~~~~~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~-~LP~~~~~~~~~~l~~~p~~~~~~ 168 (376)
+...+|+.+++.. ++++|.-.-..-+.-.++.|+......+.++++|+-|.+.+ .+|.....+ .+..+ +..
T Consensus 44 ~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gw---glt~d---g~~- 116 (243)
T 3mbr_X 44 SVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGW---ALTSD---DSH- 116 (243)
T ss_dssp EEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCC---EEEEC---SSC-
T ss_pred eEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCce---EEeeC---CCE-
Confidence 5677899887764 46676421111122346777777766678999999998753 233222222 22222 122
Q ss_pred EEEEeccCCCeEEEEEEecCCCCe-eeeccC-CCCCccccceeeeEEeCCeEEEEc-cCCeEEEEeCCCCCc
Q 017173 169 VFTVKHISPTVVAISTCHPGATEW-VTDNYQ-NRLPFVSSIWNKLVFCNGIFYCLS-LTGWLGVFDPVKRDW 237 (376)
Q Consensus 169 v~~i~~~~~~~~~~~~y~~~~~~W-~~~~~~-~~~p~~~~~~~~~v~~~G~~Y~l~-~~~~i~~~D~~~~~~ 237 (376)
++..+ .+ ..+.+.|+.+.+= ..++.. ...+ ........+.+|.+|+-. .+..|.++|+.++.-
T Consensus 117 L~vSd-gs---~~l~~iDp~t~~~~~~I~V~~~g~~--~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V 182 (243)
T 3mbr_X 117 LYMSD-GT---AVIRKLDPDTLQQVGSIKVTAGGRP--LDNLNELEWVNGELLANVWLTSRIARIDPASGKV 182 (243)
T ss_dssp EEEEC-SS---SEEEEECTTTCCEEEEEECEETTEE--CCCEEEEEEETTEEEEEETTTTEEEEECTTTCBE
T ss_pred EEEEC-CC---CeEEEEeCCCCeEEEEEEEccCCcc--cccceeeEEeCCEEEEEECCCCeEEEEECCCCCE
Confidence 22222 22 1567788877532 222221 0111 123345667799999766 477899999998753
No 79
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=54.09 E-value=1.3e+02 Score=27.29 Aligned_cols=189 Identities=8% Similarity=0.034 Sum_probs=95.3
Q ss_pred EEEEEcCCCCceEEeecCCCCCCeEEEecCCe-EEEEeCC--CCeEEEEcCCCcceecCCCcccceeEEEeecCCCCCCe
Q 017173 91 LYEFYDPAQRKTYSLELPELYGSRVCYTKDSW-LLLYRPR--THRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSC 167 (376)
Q Consensus 91 ~~~~~~~~~~~~~~~~lp~~~~~~~~~s~~G~-ll~~~~~--~~~~~l~NP~T~~~~~LP~~~~~~~~~~l~~~p~~~~~ 167 (376)
...++|+.+++...+.-..-....+.-+.+|- |++.... ...++++|.-|++...|.........+.++ |. +.+
T Consensus 204 ~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s--pd-g~~ 280 (415)
T 2hqs_A 204 ALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWF--PD-SQN 280 (415)
T ss_dssp EEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEEC--TT-SSE
T ss_pred EEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEEC--CC-CCE
Confidence 45566776665544331110111223366664 4434322 236999999999877665443333334443 32 344
Q ss_pred EEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEE-eCCe-EEEEccC---CeEEEEeCCCCCceeeee
Q 017173 168 VVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVF-CNGI-FYCLSLT---GWLGVFDPVKRDWGVLVV 242 (376)
Q Consensus 168 ~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~-~~G~-~Y~l~~~---~~i~~~D~~~~~~~~~~~ 242 (376)
+++.... . +...+.+++..++.-..+.... .....+.+ -+|+ +++.... ..|.++|+.+.....+.
T Consensus 281 l~~~s~~-~-g~~~i~~~d~~~~~~~~l~~~~------~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~- 351 (415)
T 2hqs_A 281 LAFTSDQ-A-GRPQVYKVNINGGAPQRITWEG------SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLS- 351 (415)
T ss_dssp EEEEECT-T-SSCEEEEEETTSSCCEECCCSS------SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECC-
T ss_pred EEEEECC-C-CCcEEEEEECCCCCEEEEecCC------CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEec-
Confidence 4444322 1 2335677777665533322211 11223333 2665 4444432 47999999876543321
Q ss_pred CCCCCCcccccccccceeEEEEECCcEEEEEEecCCCcEEEEEecCCccEEEeeccCCcE
Q 017173 243 PPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMKTLDGLT 302 (376)
Q Consensus 243 p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~~~~V~~ld~~~~~W~~v~~lg~~~ 302 (376)
.. .. .......-+|+.++..........||.+|.++....++..-.+.+
T Consensus 352 -~~--~~--------~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v 400 (415)
T 2hqs_A 352 -ST--FL--------DETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQV 400 (415)
T ss_dssp -CS--SS--------CEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEE
T ss_pred -CC--CC--------cCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCC
Confidence 11 01 111122335777766665555567888887776666665544443
No 80
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=53.52 E-value=1.2e+02 Score=26.68 Aligned_cols=103 Identities=6% Similarity=-0.067 Sum_probs=49.4
Q ss_pred eEEEEeCCCCeEEEEcCCCcceecCCC---cccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccC
Q 017173 122 WLLLYRPRTHRVFFFNPFTRDMIKLPR---FELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQ 198 (376)
Q Consensus 122 ~ll~~~~~~~~~~l~NP~T~~~~~LP~---~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~ 198 (376)
+|+.... ...+.|+|..+++....-. .......+.++ |..+.+.+.+ . ..+ .+.+|+..+.........
T Consensus 88 ~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~~l~s~-~-~d~---~i~iwd~~~~~~~~~~~~ 159 (383)
T 3ei3_B 88 TVAVGSK-GGDIILWDYDVQNKTSFIQGMGPGDAITGMKFN--QFNTNQLFVS-S-IRG---ATTLRDFSGSVIQVFAKT 159 (383)
T ss_dssp EEEEEEB-TSCEEEEETTSTTCEEEECCCSTTCBEEEEEEE--TTEEEEEEEE-E-TTT---EEEEEETTSCEEEEEECC
T ss_pred EEEEEcC-CCeEEEEeCCCcccceeeecCCcCCceeEEEeC--CCCCCEEEEE-e-CCC---EEEEEECCCCceEEEecc
Confidence 4444433 3478888888876543221 11122233443 3222333322 2 111 566777766554443322
Q ss_pred CCCCccccceeeeEEe-CCe-EEEEccCCeEEEEeCCCC
Q 017173 199 NRLPFVSSIWNKLVFC-NGI-FYCLSLTGWLGVFDPVKR 235 (376)
Q Consensus 199 ~~~p~~~~~~~~~v~~-~G~-~Y~l~~~~~i~~~D~~~~ 235 (376)
... ......+.+. +|. +.....++.|.+||+...
T Consensus 160 ~~~---~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 195 (383)
T 3ei3_B 160 DSW---DYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGH 195 (383)
T ss_dssp CCS---SCCEEEEEEETTTTEEEEEETTSEEEEEETTSC
T ss_pred CCC---CCCeEEEEECCCCCEEEEECCCCCEEEEECCCC
Confidence 111 1223333333 444 444556789999999644
No 81
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=53.50 E-value=1.1e+02 Score=26.29 Aligned_cols=102 Identities=8% Similarity=0.008 Sum_probs=54.6
Q ss_pred EEEEEecCCCCeeeeccCCCCCccccceeeeEEe-CCeEEEEccC-----CeEEEEeCCCCCceeeeeCCCCCCcccccc
Q 017173 181 AISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NGIFYCLSLT-----GWLGVFDPVKRDWGVLVVPPPKCPENFFAK 254 (376)
Q Consensus 181 ~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G~~Y~l~~~-----~~i~~~D~~~~~~~~~~~p~p~~~~~~~~~ 254 (376)
.+..++..++..+...... . .....+++- +|.+|+.+.. +.|..||+++.....+..... +..
T Consensus 67 ~i~~~d~~~~~~~~~~~~~--~---~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~---- 135 (333)
T 2dg1_A 67 NIFKINPETKEIKRPFVSH--K---ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLS--TAY---- 135 (333)
T ss_dssp EEEEECTTTCCEEEEEECS--S---SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSS--SCC----
T ss_pred EEEEEeCCCCcEEEEeeCC--C---CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCc--cCC----
Confidence 5667787777665443111 0 223344443 7888887654 479999998876542211111 110
Q ss_pred cccceeEEEEECCcEEEEEEec---CCCcEEEEEecCCccEEEe
Q 017173 255 NWWKGKFMVEHKGDILVIYTCC---SENPIIFKLDQSKMAWEEM 295 (376)
Q Consensus 255 ~~~~~~~Lv~~~G~LllV~~~~---~~~~~V~~ld~~~~~W~~v 295 (376)
......+..+|.+++..... .....||++|.++.+...+
T Consensus 136 --~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 136 --CIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp --CEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred --cccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 01112233468777654321 1246799998876555543
No 82
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=53.41 E-value=1.1e+02 Score=26.28 Aligned_cols=134 Identities=12% Similarity=0.014 Sum_probs=73.3
Q ss_pred EEEEEcCCCCceE-EeecCCCCCCeEEEecCCeEEEEeCCCCeEEEEcCCCccee-cCCCcccceeEEEeecCCCCCCeE
Q 017173 91 LYEFYDPAQRKTY-SLELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMI-KLPRFELTYQIVAFSCAPTSSSCV 168 (376)
Q Consensus 91 ~~~~~~~~~~~~~-~~~lp~~~~~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~-~LP~~~~~~~~~~l~~~p~~~~~~ 168 (376)
....+|+.+++.. ++++|.-.-..-+.-.++.|+......+.++++|+-|.+.+ .+|-....+ .+..+ +..
T Consensus 66 ~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~---glt~d---g~~- 138 (262)
T 3nol_A 66 SIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGW---GLTHN---DQY- 138 (262)
T ss_dssp EEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCC---CEEEC---SSC-
T ss_pred eEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCce---EEecC---CCE-
Confidence 4567899887754 45666311111122346788877776678999999998753 232211111 12222 122
Q ss_pred EEEEeccCCCeEEEEEEecCCCCe-eeeccCC-CCCccccceeeeEEeCCeEEEEcc-CCeEEEEeCCCCCc
Q 017173 169 VFTVKHISPTVVAISTCHPGATEW-VTDNYQN-RLPFVSSIWNKLVFCNGIFYCLSL-TGWLGVFDPVKRDW 237 (376)
Q Consensus 169 v~~i~~~~~~~~~~~~y~~~~~~W-~~~~~~~-~~p~~~~~~~~~v~~~G~~Y~l~~-~~~i~~~D~~~~~~ 237 (376)
++..+ .. ..+.+.|+.+.+= ..+.... .-| ........+.+|.+|+-.. ++.|.++|+.++.-
T Consensus 139 L~~Sd-Gs---~~i~~iDp~T~~v~~~I~V~~~g~~--~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V 204 (262)
T 3nol_A 139 LIMSD-GT---PVLRFLDPESLTPVRTITVTAHGEE--LPELNELEWVDGEIFANVWQTNKIVRIDPETGKV 204 (262)
T ss_dssp EEECC-SS---SEEEEECTTTCSEEEEEECEETTEE--CCCEEEEEEETTEEEEEETTSSEEEEECTTTCBE
T ss_pred EEEEC-CC---CeEEEEcCCCCeEEEEEEeccCCcc--ccccceeEEECCEEEEEEccCCeEEEEECCCCcE
Confidence 22222 12 2567778776532 2222210 011 1223345677999998664 67899999998753
No 83
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=53.38 E-value=1.1e+02 Score=26.49 Aligned_cols=101 Identities=11% Similarity=0.078 Sum_probs=49.0
Q ss_pred eEEEEeCCCCeEEEEcCCCcceec-CCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCC----CCeeeec
Q 017173 122 WLLLYRPRTHRVFFFNPFTRDMIK-LPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGA----TEWVTDN 196 (376)
Q Consensus 122 ~ll~~~~~~~~~~l~NP~T~~~~~-LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~----~~W~~~~ 196 (376)
.|++.... .+..+++-++.... +|.+... ..+++ ++..+ .+++.+...+ .+..++..+ ..-..+-
T Consensus 3 ~ll~~~~~--~I~~i~~~~~~~~~~~~~~~~p-~g~~~--d~~~~--~ly~~D~~~~---~I~~~~~~g~~~~~~~~~~~ 72 (316)
T 1ijq_A 3 YLFFTNRH--EVRKMTLDRSEYTSLIPNLRNV-VALDT--EVASN--RIYWSDLSQR---MICSTQLDRAHGVSSYDTVI 72 (316)
T ss_dssp EEEEECBS--SEEEEETTSCCCEEEECSCSSE-EEEEE--ETTTT--EEEEEETTTT---EEEEEEC--------CEEEE
T ss_pred EEEEECCC--eEEEEECCCcceEehhcCCCce-EEEEE--EeCCC--EEEEEECCCC---cEEEEECCCCCCCcccEEEE
Confidence 34555433 68888888776443 3443322 22333 32222 3445443222 344555443 1112111
Q ss_pred cCCCCCccccceeeeEE--eCCeEEEEcc-CCeEEEEeCCCCCc
Q 017173 197 YQNRLPFVSSIWNKLVF--CNGIFYCLSL-TGWLGVFDPVKRDW 237 (376)
Q Consensus 197 ~~~~~p~~~~~~~~~v~--~~G~~Y~l~~-~~~i~~~D~~~~~~ 237 (376)
...+ .....+++ .+|.+||... .+.|.++|++...-
T Consensus 73 -~~~~----~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~ 111 (316)
T 1ijq_A 73 -SRDI----QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR 111 (316)
T ss_dssp -CSSC----SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE
T ss_pred -eCCC----CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCce
Confidence 1111 12334555 3789999865 57899999986543
No 84
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=52.77 E-value=1.1e+02 Score=26.35 Aligned_cols=80 Identities=16% Similarity=0.106 Sum_probs=46.2
Q ss_pred eeeeEEe-CC-eEEEEccCCeEEEEeCCCCCc-eeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecCCCcEEEE
Q 017173 208 WNKLVFC-NG-IFYCLSLTGWLGVFDPVKRDW-GVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFK 284 (376)
Q Consensus 208 ~~~~v~~-~G-~~Y~l~~~~~i~~~D~~~~~~-~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~~~~V~~ 284 (376)
...+.+. +| .++....++.|.+||+.+... ..+. ....+ ....-...+|.++.+. .+..+.||.
T Consensus 205 v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~---------v~~~~~~~~~~~l~~~--~d~~i~i~~ 271 (372)
T 1k8k_C 205 VHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA--SETLP---------LLAVTFITESSLVAAG--HDCFPVLFT 271 (372)
T ss_dssp EEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE--CSSCC---------EEEEEEEETTEEEEEE--TTSSCEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc--cCCCC---------eEEEEEecCCCEEEEE--eCCeEEEEE
Confidence 3334443 45 455566788999999986542 1221 11000 0111122457766554 667899998
Q ss_pred EecCCccEEEeeccCC
Q 017173 285 LDQSKMAWEEMKTLDG 300 (376)
Q Consensus 285 ld~~~~~W~~v~~lg~ 300 (376)
++...++|..+..+..
T Consensus 272 ~~~~~~~~~~~~~~~~ 287 (372)
T 1k8k_C 272 YDSAAGKLSFGGRLDV 287 (372)
T ss_dssp EETTTTEEEECCCCCC
T ss_pred ccCcCceEEEeeccCc
Confidence 8776678988877654
No 85
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=52.62 E-value=1.3e+02 Score=27.00 Aligned_cols=103 Identities=12% Similarity=0.100 Sum_probs=54.4
Q ss_pred ecCCeEEEEeCCCCeEEEEcCCCcceecCCCc---ccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeee
Q 017173 118 TKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRF---ELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVT 194 (376)
Q Consensus 118 s~~G~ll~~~~~~~~~~l~NP~T~~~~~LP~~---~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~ 194 (376)
|+++.|....+ +.++|||..||+...+-.. ......++++ | ++.+++.+-. .+ .+.+|+..+++-..
T Consensus 114 S~~n~lAvgld--~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fs--p-dg~~lasgs~--Dg---~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 114 SSGNVLAVALD--NSVYLWSASSGDILQLLQMEQPGEYISSVAWI--K-EGNYLAVGTS--SA---EVQLWDVQQQKRLR 183 (420)
T ss_dssp CTTSEEEEEET--TEEEEEETTTCCEEEEEECCSTTCCEEEEEEC--T-TSSEEEEEET--TS---CEEEEETTTTEEEE
T ss_pred CCCCEEEEEeC--CEEEEEECCCCCEEEEEEecCCCCcEEEEEEC--C-CCCEEEEEEC--CC---eEEEEEcCCCcEEE
Confidence 56776665543 3899999999986643222 1122345554 3 2355544432 22 46678776653221
Q ss_pred eccCCCCCccccceeeeEEeCCeE-EEEccCCeEEEEeCCCCC
Q 017173 195 DNYQNRLPFVSSIWNKLVFCNGIF-YCLSLTGWLGVFDPVKRD 236 (376)
Q Consensus 195 ~~~~~~~p~~~~~~~~~v~~~G~~-Y~l~~~~~i~~~D~~~~~ 236 (376)
.... . ..... .+..+|.+ ..-..++.+..+|.....
T Consensus 184 ~~~~--h---~~~v~-~~s~~~~~l~sgs~d~~i~~~d~~~~~ 220 (420)
T 4gga_A 184 NMTS--H---SARVG-SLSWNSYILSSGSRSGHIHHHDVRVAE 220 (420)
T ss_dssp EECC--C---SSCEE-EEEEETTEEEEEETTSEEEEEETTSSS
T ss_pred EEeC--C---CCceE-EEeeCCCEEEEEeCCCceeEeeecccc
Confidence 1111 1 11222 23445544 344557888899987654
No 86
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=51.97 E-value=1.4e+02 Score=27.07 Aligned_cols=172 Identities=10% Similarity=0.019 Sum_probs=83.4
Q ss_pred cEEEEEcCCCCceEE-eecCCCCCCeEEEecCCeEEEEeCCCCeEEEEcCCCcceec-CCCcccceeEEEeecCCCCCCe
Q 017173 90 NLYEFYDPAQRKTYS-LELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIK-LPRFELTYQIVAFSCAPTSSSC 167 (376)
Q Consensus 90 ~~~~~~~~~~~~~~~-~~lp~~~~~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~~-LP~~~~~~~~~~l~~~p~~~~~ 167 (376)
....++|....+... +....-.-..+..+.+|-.++.....+.+.++|.-+++.+. +.........+.++ +.+
T Consensus 290 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~-----~~~ 364 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS-----DKF 364 (464)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC-----SSE
T ss_pred CeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc-----CCE
Confidence 345667776654332 21111011122234455444443334579999999887542 32222222233332 244
Q ss_pred EEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEeCCeEEEEccCCeEEEEeCCCCCceeeeeCCCCC
Q 017173 168 VVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSLTGWLGVFDPVKRDWGVLVVPPPKC 247 (376)
Q Consensus 168 ~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~~~~i~~~D~~~~~~~~~~~p~p~~ 247 (376)
++.+- . . ..+.+|+..+..-....... . ....-....+|.+.+.+.++.|.+||+.++.. +.....
T Consensus 365 l~s~s-~-d---g~v~vwd~~~~~~~~~~~~~-~----~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~--~~~~~~-- 430 (464)
T 3v7d_B 365 LVSAA-A-D---GSIRGWDANDYSRKFSYHHT-N----LSAITTFYVSDNILVSGSENQFNIYNLRSGKL--VHANIL-- 430 (464)
T ss_dssp EEEEE-T-T---SEEEEEETTTCCEEEEEECT-T----CCCEEEEEECSSEEEEEETTEEEEEETTTCCE--EESCTT--
T ss_pred EEEEe-C-C---CcEEEEECCCCceeeeecCC-C----CccEEEEEeCCCEEEEecCCeEEEEECCCCcE--Eehhhc--
Confidence 33332 1 1 15778887765422211111 0 11122344577777777789999999988643 221111
Q ss_pred CcccccccccceeEEEEECCcEEEEEEecCCCcEEEEEec
Q 017173 248 PENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQ 287 (376)
Q Consensus 248 ~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~~~~V~~ld~ 287 (376)
+.. ....-+..+|..+++....++...++.+|.
T Consensus 431 ~~~-------~~v~~v~~~~~~l~~~~~~~g~~~i~~ldf 463 (464)
T 3v7d_B 431 KDA-------DQIWSVNFKGKTLVAAVEKDGQSFLEILDF 463 (464)
T ss_dssp TTC-------SEEEEEEEETTEEEEEEEETTEEEEEEEEC
T ss_pred cCC-------CcEEEEEecCCEEEEEEEeCCeEEEEEeec
Confidence 111 122333445666666665555566676664
No 87
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=51.39 E-value=1.3e+02 Score=26.64 Aligned_cols=109 Identities=7% Similarity=0.011 Sum_probs=0.0
Q ss_pred ecCCeEEEEeCCCCeEEEEcCCCcceecCCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeecc
Q 017173 118 TKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNY 197 (376)
Q Consensus 118 s~~G~ll~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~ 197 (376)
+.+|-+++.......+.++|..+++....-..........+...|....+++.+-... .+.+|+..++.-.....
T Consensus 256 s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg-----~i~vwd~~~~~~~~~~~ 330 (420)
T 3vl1_A 256 GTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENG-----MLAQWDLRSPECPVGEF 330 (420)
T ss_dssp SCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTS-----EEEEEETTCTTSCSEEE
T ss_pred cCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCC-----eEEEEEcCCCcCchhhh
Q ss_pred CCCCCccccceeeeEEeCCeEEEEcc-CCeEEEEeCCC
Q 017173 198 QNRLPFVSSIWNKLVFCNGIFYCLSL-TGWLGVFDPVK 234 (376)
Q Consensus 198 ~~~~p~~~~~~~~~v~~~G~~Y~l~~-~~~i~~~D~~~ 234 (376)
..... .....+.+.+|.+.+... ++.|.+||+..
T Consensus 331 ~~~~~---~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 331 LINEG---TPINNVYFAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EESTT---SCEEEEEEETTEEEEEETTTEEEEEEEECC
T ss_pred hccCC---CCceEEEeCCCCEEEEecCCccEEEEeccC
No 88
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=51.35 E-value=1.2e+02 Score=26.35 Aligned_cols=108 Identities=12% Similarity=0.068 Sum_probs=47.0
Q ss_pred ecCCeEEEEeCCCCeEEEEcCCCcceec---CCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCC-ee
Q 017173 118 TKDSWLLLYRPRTHRVFFFNPFTRDMIK---LPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATE-WV 193 (376)
Q Consensus 118 s~~G~ll~~~~~~~~~~l~NP~T~~~~~---LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~-W~ 193 (376)
+.+|-+++.......+.|+|.-++.+.. +.........+.++ |. +.+.+.+-. .+ .+.+|+..++. |.
T Consensus 20 s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s--~~-~~~l~s~s~--d~---~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 20 NSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWA--PK-SNRIVTCSQ--DR---NAYVYEKRPDGTWK 91 (377)
T ss_dssp CSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEEC--TT-TCCEEEEET--TS---SEEEC------CCC
T ss_pred CCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEe--CC-CCEEEEEeC--CC---eEEEEEcCCCCcee
Confidence 4455544444334578899988874322 22222222334443 32 244443321 11 35677766654 54
Q ss_pred eeccCCCCCccccceeeeEEe-CCe-EEEEccCCeEEEEeCCCCC
Q 017173 194 TDNYQNRLPFVSSIWNKLVFC-NGI-FYCLSLTGWLGVFDPVKRD 236 (376)
Q Consensus 194 ~~~~~~~~p~~~~~~~~~v~~-~G~-~Y~l~~~~~i~~~D~~~~~ 236 (376)
........ ......+.+. +|. ++....++.|.+||+.+..
T Consensus 92 ~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 92 QTLVLLRL---NRAATFVRWSPNEDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp CEEECCCC---SSCEEEEECCTTSSCCEEEESSSCEEECCC----
T ss_pred eeeEeccc---CCceEEEEECCCCCEEEEEecCCeEEEEEECCcc
Confidence 33221111 1223333333 454 5555667889999998764
No 89
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=51.24 E-value=1.8e+02 Score=28.31 Aligned_cols=107 Identities=13% Similarity=0.072 Sum_probs=53.5
Q ss_pred CCeEEEEeCCCCeEEEEcCCCcce-ecCCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccC
Q 017173 120 DSWLLLYRPRTHRVFFFNPFTRDM-IKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQ 198 (376)
Q Consensus 120 ~G~ll~~~~~~~~~~l~NP~T~~~-~~LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~ 198 (376)
..+|++.... .+..++.-+... ..+|-... -..+++..++..+ .+++.+... + .+..++........+-..
T Consensus 6 ~~~Ll~s~~~--~I~~i~l~~~~~~~~~~~~~~-~~~~~l~~d~~~~--~lywtD~~~-~--~I~r~~~~g~~~~~v~~~ 77 (628)
T 4a0p_A 6 EAFLLFSRRA--DIRRISLETNNNNVAIPLTGV-KEASALDFDVTDN--RIYWTDISL-K--TISRAFMNGSALEHVVEF 77 (628)
T ss_dssp CCEEEEEETT--EEEEEESSCTTCEEECCCCSC-SCEEEEEEETTTT--EEEEEETTT-T--EEEEEETTSCSCEEEECS
T ss_pred CcEEEEEeCC--cEEEEECCCCCcceEEEcCCC-CceEEEEEECCCC--EEEEEECCC-C--eEEEEECCCCCcEEEEeC
Confidence 3456665443 777887776543 23332221 1223444444332 345544322 2 344444443333332211
Q ss_pred CCCCccccceeeeEE--eCCeEEEEcc-CCeEEEEeCCCCCcee
Q 017173 199 NRLPFVSSIWNKLVF--CNGIFYCLSL-TGWLGVFDPVKRDWGV 239 (376)
Q Consensus 199 ~~~p~~~~~~~~~v~--~~G~~Y~l~~-~~~i~~~D~~~~~~~~ 239 (376)
. + .....+++ .+|.+||.+. .+.|.++|++...-..
T Consensus 78 g-~----~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 78 G-L----DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp S-C----SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred C-C----CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 1 1 12334454 4689999876 5789999998754333
No 90
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=50.47 E-value=1.2e+02 Score=26.05 Aligned_cols=134 Identities=8% Similarity=-0.043 Sum_probs=72.4
Q ss_pred EEEEEcCCCCceE-EeecCCCCCCeEEEecCCeEEEEeCCCCeEEEEcCCCccee-cCCCcccceeEEEeecCCCCCCeE
Q 017173 91 LYEFYDPAQRKTY-SLELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMI-KLPRFELTYQIVAFSCAPTSSSCV 168 (376)
Q Consensus 91 ~~~~~~~~~~~~~-~~~lp~~~~~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~-~LP~~~~~~~~~~l~~~p~~~~~~ 168 (376)
....+|+.+++.. ++ +|.-.-..-+.-.++.|+......+.++++|+-|.+.+ .+|.....+ .+..+ +. .
T Consensus 76 ~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGw---GLt~D---g~-~ 147 (268)
T 3nok_A 76 TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGW---GLCYW---NG-K 147 (268)
T ss_dssp EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSCCC---CEEEE---TT-E
T ss_pred EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCcee---EEecC---CC-E
Confidence 4667788877653 34 55311001123346777777766678999999998753 233221111 11111 12 2
Q ss_pred EEEEeccCCCeEEEEEEecCCCCee-eeccCCCCCccccceeeeEEeCCeEEEEc-cCCeEEEEeCCCCCc
Q 017173 169 VFTVKHISPTVVAISTCHPGATEWV-TDNYQNRLPFVSSIWNKLVFCNGIFYCLS-LTGWLGVFDPVKRDW 237 (376)
Q Consensus 169 v~~i~~~~~~~~~~~~y~~~~~~W~-~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~-~~~~i~~~D~~~~~~ 237 (376)
++..+ .+ ..+.+.|+.+.+=. .+.... -+..........+.+|.+|+-. .++.|.++|+.++.-
T Consensus 148 L~vSd-Gs---~~l~~iDp~T~~v~~~I~V~~-~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 148 LVRSD-GG---TMLTFHEPDGFALVGAVQVKL-RGQPVELINELECANGVIYANIWHSSDVLEIDPATGTV 213 (268)
T ss_dssp EEEEC-SS---SEEEEECTTTCCEEEEEECEE-TTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBE
T ss_pred EEEEC-CC---CEEEEEcCCCCeEEEEEEeCC-CCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcE
Confidence 22222 22 15677777765322 222210 0100123445667799999766 467899999998753
No 91
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=49.65 E-value=1.3e+02 Score=26.25 Aligned_cols=202 Identities=10% Similarity=0.017 Sum_probs=0.0
Q ss_pred EEEEEcCCCCceEEeecCCCCCCeEEEec-CCeEEEEeCC------CCeEEEEcCCCcceecCCCcccceeEEEeecCCC
Q 017173 91 LYEFYDPAQRKTYSLELPELYGSRVCYTK-DSWLLLYRPR------THRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPT 163 (376)
Q Consensus 91 ~~~~~~~~~~~~~~~~lp~~~~~~~~~s~-~G~ll~~~~~------~~~~~l~NP~T~~~~~LP~~~~~~~~~~l~~~p~ 163 (376)
....+|+.+++...+.-.......+..+. +|-.+.+... ...++++|+-++....|..............+|.
T Consensus 169 ~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spd 248 (388)
T 3pe7_A 169 RLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPD 248 (388)
T ss_dssp EEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTT
T ss_pred eEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCC
Q ss_pred CCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeee-EEeCCeEEEE----------ccCCeEEEEeC
Q 017173 164 SSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKL-VFCNGIFYCL----------SLTGWLGVFDP 232 (376)
Q Consensus 164 ~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~-v~~~G~~Y~l----------~~~~~i~~~D~ 232 (376)
. ..+++...........+.+++..++.-+.+...+............ ..-+|+..++ .....|..+|+
T Consensus 249 g-~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~ 327 (388)
T 3pe7_A 249 G-SALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNM 327 (388)
T ss_dssp S-SCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEET
T ss_pred C-CEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEec
Q ss_pred CCCCceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecCCCcEEEEEecCCccEE
Q 017173 233 VKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWE 293 (376)
Q Consensus 233 ~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~~~~V~~ld~~~~~W~ 293 (376)
.++....+..........+.............-+|+.+++.........||.+|.....|+
T Consensus 328 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~~~~~ 388 (388)
T 3pe7_A 328 KNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPESVWK 388 (388)
T ss_dssp TTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCGGGGC
T ss_pred cCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECChhccC
No 92
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=49.27 E-value=1.2e+02 Score=25.75 Aligned_cols=131 Identities=6% Similarity=-0.107 Sum_probs=65.0
Q ss_pred cEEEEEcCCCCc----eEEeecCCCCC-CeEEEecCCe-EEEEeCCCCeEEEEcC-CCcceecCCC--cccceeEEEeec
Q 017173 90 NLYEFYDPAQRK----TYSLELPELYG-SRVCYTKDSW-LLLYRPRTHRVFFFNP-FTRDMIKLPR--FELTYQIVAFSC 160 (376)
Q Consensus 90 ~~~~~~~~~~~~----~~~~~lp~~~~-~~~~~s~~G~-ll~~~~~~~~~~l~NP-~T~~~~~LP~--~~~~~~~~~l~~ 160 (376)
....+|+..... ...+. ..-.. ..+..+.+|- +++.......+.++|. -++....+.. .......+.+.
T Consensus 33 ~~v~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~- 110 (342)
T 1yfq_A 33 GSLTVYKFDIQAKNVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKY- 110 (342)
T ss_dssp SEEEEEEEETTTTEEEEEEEE-ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEE-
T ss_pred CeEEEEEeCCCCccccceeee-ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeC-
Confidence 456677766654 22221 11011 1222344454 4443333458999999 8887766654 33333334443
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEEEecCCC---C----eeeeccCCCCCccccceeeeEEeCCeEEEEccCCeEEEEeCC
Q 017173 161 APTSSSCVVFTVKHISPTVVAISTCHPGAT---E----WVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSLTGWLGVFDPV 233 (376)
Q Consensus 161 ~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~---~----W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~~~~i~~~D~~ 233 (376)
+ +.+++.+- . . ..+.+|+..+. . ...+.. +. .......+.+....++..+.++.|.+||+.
T Consensus 111 -~--~~~l~s~~-~-d---~~i~iwd~~~~~~~~~~~~~~~~~~---~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~ 178 (342)
T 1yfq_A 111 -G--DDKLIAAS-W-D---GLIEVIDPRNYGDGVIAVKNLNSNN---TK-VKNKIFTMDTNSSRLIVGMNNSQVQWFRLP 178 (342)
T ss_dssp -T--TTEEEEEE-T-T---SEEEEECHHHHTTBCEEEEESCSSS---SS-SCCCEEEEEECSSEEEEEESTTEEEEEESS
T ss_pred -C--CCEEEEEc-C-C---CeEEEEcccccccccccccCCeeeE---Ee-eCCceEEEEecCCcEEEEeCCCeEEEEECC
Confidence 3 34433332 1 1 14566664320 0 111111 11 012345555555567767778899999998
Q ss_pred C
Q 017173 234 K 234 (376)
Q Consensus 234 ~ 234 (376)
+
T Consensus 179 ~ 179 (342)
T 1yfq_A 179 L 179 (342)
T ss_dssp C
T ss_pred c
Confidence 7
No 93
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=49.10 E-value=1.3e+02 Score=25.83 Aligned_cols=139 Identities=12% Similarity=0.119 Sum_probs=68.8
Q ss_pred eecCcEEEEEcCCC-CceEEeecCCCCC--CeEEEecCCeEEEEeCCCCeEEEEcCCCcceecCCCcccceeEEEeecCC
Q 017173 86 PKFGNLYEFYDPAQ-RKTYSLELPELYG--SRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAFSCAP 162 (376)
Q Consensus 86 ~~~~~~~~~~~~~~-~~~~~~~lp~~~~--~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~l~~~p 162 (376)
........++|... +......+..... ..+..+.+|-+++.....+.+.++|.-+++.+.+.........+.+...+
T Consensus 60 ~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~ 139 (368)
T 3mmy_A 60 GSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAP 139 (368)
T ss_dssp EETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECS
T ss_pred ECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCC
Confidence 33335567788775 3332122211111 12223545543433333457999999998866543322223334442222
Q ss_pred CCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEeCCeEEEEccCCeEEEEeCCCCC
Q 017173 163 TSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSLTGWLGVFDPVKRD 236 (376)
Q Consensus 163 ~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~~~~i~~~D~~~~~ 236 (376)
. +.+.+.+ .. .+ .+.+|+..++.-...-. .+ ............+++...++.+.+||+....
T Consensus 140 ~-~~~l~~~-~~-dg---~i~vwd~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 201 (368)
T 3mmy_A 140 N-YSCVMTG-SW-DK---TLKFWDTRSSNPMMVLQ---LP---ERCYCADVIYPMAVVATAERGLIVYQLENQP 201 (368)
T ss_dssp S-CEEEEEE-ET-TS---EEEEECSSCSSCSEEEE---CS---SCEEEEEEETTEEEEEEGGGCEEEEECSSSC
T ss_pred C-CCEEEEc-cC-CC---cEEEEECCCCcEEEEEe---cC---CCceEEEecCCeeEEEeCCCcEEEEEecccc
Confidence 1 2222222 21 21 56778766543211110 11 1233445556677777788899999998754
No 94
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=48.86 E-value=1.4e+02 Score=26.34 Aligned_cols=104 Identities=13% Similarity=0.047 Sum_probs=52.7
Q ss_pred CCeEEEEeCCCCeEEEEcCCCcceec-CCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccC
Q 017173 120 DSWLLLYRPRTHRVFFFNPFTRDMIK-LPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQ 198 (376)
Q Consensus 120 ~G~ll~~~~~~~~~~l~NP~T~~~~~-LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~ 198 (376)
.++|++.... .+..+++-+..... ++.... ...+..++..+ .+++.+...+ .+..++.....-+.+...
T Consensus 44 ~~~ll~~~~~--~I~~i~~~g~~~~~~~~~~~~---~~~l~~d~~~~--~ly~~D~~~~---~I~r~~~~g~~~~~~~~~ 113 (349)
T 3v64_C 44 EPVLLFANRI--DIRQVLPHRSEYTLLLNNLEN---AIALDFHHRRE--LVFWSDVTLD---RILRANLNGSNVEEVVST 113 (349)
T ss_dssp CCEEEEECBS--CEEEECTTSCCEEEEECSCSC---EEEEEEETTTT--EEEEEETTTT---EEEEEETTSCSCEEEECS
T ss_pred CceeEeeccc--ceEEEeCCCCeeEEeecCCCc---eEEEEEecccc--EEEEEeccCC---ceEEEecCCCCceEEEeC
Confidence 5677666543 67778876654432 222221 23333333222 3444443222 345555554433332211
Q ss_pred CCCCccccceeeeEE--eCCeEEEEcc-CCeEEEEeCCCCCce
Q 017173 199 NRLPFVSSIWNKLVF--CNGIFYCLSL-TGWLGVFDPVKRDWG 238 (376)
Q Consensus 199 ~~~p~~~~~~~~~v~--~~G~~Y~l~~-~~~i~~~D~~~~~~~ 238 (376)
.+ .....+++ .+|.+||... .+.|.++|++...-.
T Consensus 114 -~~----~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 114 -GL----ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 151 (349)
T ss_dssp -SC----SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred -CC----CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE
Confidence 11 12234444 3789999876 578999999875433
No 95
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=47.84 E-value=1.3e+02 Score=25.67 Aligned_cols=106 Identities=8% Similarity=-0.053 Sum_probs=50.1
Q ss_pred cCCeEEEEeCCCCeEEEEcCCCcceecCCCcccceeEEEeecCCC--CCCeEEEEEeccCCCeEEEEEEecCCC--Ceee
Q 017173 119 KDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPT--SSSCVVFTVKHISPTVVAISTCHPGAT--EWVT 194 (376)
Q Consensus 119 ~~G~ll~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~l~~~p~--~~~~~v~~i~~~~~~~~~~~~y~~~~~--~W~~ 194 (376)
.+|-+++.......+.++|.-+++.............+.+ .|. .+.+.+.+- ..+ .+.+|+..++ ....
T Consensus 178 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~l~~~~--~dg---~i~i~d~~~~~~~~~~ 250 (357)
T 3i2n_A 178 QEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEF--DRKDISMNKLVATS--LEG---KFHVFDMRTQHPTKGF 250 (357)
T ss_dssp -CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEE--SCSSSSCCEEEEEE--STT---EEEEEEEEEEETTTEE
T ss_pred CCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEc--CCCCCCCCEEEEEC--CCC---eEEEEeCcCCCcccce
Confidence 4554444444445899999998876543222222223333 342 334444432 121 4555654332 1111
Q ss_pred --eccCCCCCccccceeeeEEe-CCe--EEEEccCCeEEEEeCCCC
Q 017173 195 --DNYQNRLPFVSSIWNKLVFC-NGI--FYCLSLTGWLGVFDPVKR 235 (376)
Q Consensus 195 --~~~~~~~p~~~~~~~~~v~~-~G~--~Y~l~~~~~i~~~D~~~~ 235 (376)
..... . ......+.+. +|. +.....++.|.+||+...
T Consensus 251 ~~~~~~~-~---~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 251 ASVSEKA-H---KSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp EEEEEEC-C---SSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred eeeccCC-C---cCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 00000 0 1234444444 355 333455788999998754
No 96
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=47.47 E-value=1.6e+02 Score=26.48 Aligned_cols=166 Identities=10% Similarity=0.014 Sum_probs=77.4
Q ss_pred eehhccccccccCccccC---CCCCCceEEEEeecCcEEEEEcCCCCceEEeecCCCCCCeEEE--ecCCeEEEEeCCCC
Q 017173 57 VHASVVCKKWHAPAISVR---VVNQSPWLMYFPKFGNLYEFYDPAQRKTYSLELPELYGSRVCY--TKDSWLLLYRPRTH 131 (376)
Q Consensus 57 ~r~r~VCk~Wrs~~~~~~---~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~--s~~G~ll~~~~~~~ 131 (376)
-.++|.|..=-.+..+.+ .....|+|++... .....+++.......+ ++.+....-+. ..+|.|+..+...+
T Consensus 62 g~~~C~C~~g~~l~~d~~~C~~~~~~~~l~~~~~--~~I~~i~~~~~~~~~~-~~~~~~~~gl~~d~~~~~ly~~D~~~~ 138 (386)
T 3v65_B 62 GAFQCWCEAGYELRPDRRSCKALGPEPVLLFANR--IDIRQVLPHRSEYTLL-LNNLENAIALDFHHRRELVFWSDVTLD 138 (386)
T ss_dssp --CCEECCTTEEECTTSSCEEECSSCCEEEEECB--SCEEEECTTSCCCEEE-ECSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCCeEEECCCceEcCCCCeECCccccceeEeecC--ccceeeccCCCcEEEE-ecCCCccEEEEEecCCCeEEEEeCCCC
Confidence 346667765332222111 1123566665433 2344456655543322 22222211122 25788888877666
Q ss_pred eEEEEcCCCcceecCC--CcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCcccccee
Q 017173 132 RVFFFNPFTRDMIKLP--RFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWN 209 (376)
Q Consensus 132 ~~~l~NP~T~~~~~LP--~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~ 209 (376)
.++.+++-++....+- .+..+ ..+++. +..+ .+++.+.... .+.+++.....-+.+.. ..+ ....
T Consensus 139 ~I~r~~~~g~~~~~~~~~~~~~p-~glavd--~~~g--~lY~~d~~~~---~I~~~~~dg~~~~~l~~-~~l----~~P~ 205 (386)
T 3v65_B 139 RILRANLNGSNVEEVVSTGLESP-GGLAVD--WVHD--KLYWTDSGTS---RIEVANLDGAHRKVLLW-QSL----EKPR 205 (386)
T ss_dssp EEEEEETTSCCEEEEECSSCSCC-CCEEEE--TTTT--EEEEEETTTT---EEEECBTTSCSCEEEEC-SSC----SCEE
T ss_pred cEEEEecCCCCcEEEEeCCCCCc-cEEEEE--eCCC--eEEEEcCCCC---eEEEEeCCCCceEEeec-CCC----CCCc
Confidence 8889998876533221 11111 123332 1111 2333332221 34455543322222211 111 2345
Q ss_pred eeEEe--CCeEEEEccC--CeEEEEeCCCCCce
Q 017173 210 KLVFC--NGIFYCLSLT--GWLGVFDPVKRDWG 238 (376)
Q Consensus 210 ~~v~~--~G~~Y~l~~~--~~i~~~D~~~~~~~ 238 (376)
++++. +|.+||.... +.|..+|++...-.
T Consensus 206 giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~ 238 (386)
T 3v65_B 206 AIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR 238 (386)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred EEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE
Confidence 55665 7899998753 68999999875433
No 97
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=46.10 E-value=2.4e+02 Score=28.10 Aligned_cols=134 Identities=11% Similarity=0.114 Sum_probs=68.3
Q ss_pred EEEEcCCCCceEEeecC----CCCCCe---EEEecCCeEEEEeCCCCeEEEEcCCCcceecCCC------cccceeEEEe
Q 017173 92 YEFYDPAQRKTYSLELP----ELYGSR---VCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPR------FELTYQIVAF 158 (376)
Q Consensus 92 ~~~~~~~~~~~~~~~lp----~~~~~~---~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~~LP~------~~~~~~~~~l 158 (376)
...|++.++++..+... .+.... +....+|-|.+... ..++.+||-++.. .+.. ++... ...+
T Consensus 473 l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~-i~~i 548 (795)
T 4a2l_A 473 LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI-QKASILPVSNVTKLF-TNCI 548 (795)
T ss_dssp EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE-EECCCSCSCGGGGSC-EEEE
T ss_pred eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE-EEecCCCCCCCCCCe-eEEE
Confidence 34567766665544322 122222 22345677776655 3788888888765 3221 11111 1112
Q ss_pred ecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEe-CCeEEEEccCCeEEEEeCCCCCc
Q 017173 159 SCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NGIFYCLSLTGWLGVFDPVKRDW 237 (376)
Q Consensus 159 ~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G~~Y~l~~~~~i~~~D~~~~~~ 237 (376)
..++. ..+.++ ... .+..|++.++.++.......++. ..+..++.- +|.+++-+ ...|..||+.++.+
T Consensus 549 ~~d~~--g~lWig--T~~----Gl~~~d~~~~~~~~~~~~~gl~~--~~i~~i~~d~~g~lWi~t-~~Gl~~~~~~~~~~ 617 (795)
T 4a2l_A 549 YEASN--GIIWVG--TRE----GFYCFNEKDKQIKRYNTTNGLPN--NVVYGILEDSFGRLWLST-NRGISCFNPETEKF 617 (795)
T ss_dssp EECTT--SCEEEE--ESS----CEEEEETTTTEEEEECGGGTCSC--SCEEEEEECTTSCEEEEE-TTEEEEEETTTTEE
T ss_pred EECCC--CCEEEE--eCC----CceeECCCCCcEEEeCCCCCCch--hheEEEEECCCCCEEEEc-CCceEEEcCCCCcE
Confidence 22211 112222 211 35677888887776544333441 223333332 57776665 56799999998876
Q ss_pred eee
Q 017173 238 GVL 240 (376)
Q Consensus 238 ~~~ 240 (376)
..+
T Consensus 618 ~~~ 620 (795)
T 4a2l_A 618 RNF 620 (795)
T ss_dssp EEE
T ss_pred EEc
Confidence 544
No 98
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=45.50 E-value=1.3e+02 Score=24.75 Aligned_cols=134 Identities=11% Similarity=0.039 Sum_probs=65.3
Q ss_pred cEEEEEcCCCCceEEeecCCCCC-CeEEEecCCeEEEEeCCCCeEEEEcCCCcceecCCCccc-ceeEEEeecCCCCCCe
Q 017173 90 NLYEFYDPAQRKTYSLELPELYG-SRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFEL-TYQIVAFSCAPTSSSC 167 (376)
Q Consensus 90 ~~~~~~~~~~~~~~~~~lp~~~~-~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~~LP~~~~-~~~~~~l~~~p~~~~~ 167 (376)
.....+++.+.....+....+.. ..+....+|.+++.+.....+.++++-+........... ....+++. +. +.
T Consensus 87 ~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~--~~-g~- 162 (270)
T 1rwi_B 87 NRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVD--NS-GN- 162 (270)
T ss_dssp TEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEEC--TT-CC-
T ss_pred CEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEe--CC-CC-
Confidence 34555676665443333222111 122334577777776555578888876665443322211 11224443 21 22
Q ss_pred EEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEe-CCeEEEEcc-CCeEEEEeCCCCC
Q 017173 168 VVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NGIFYCLSL-TGWLGVFDPVKRD 236 (376)
Q Consensus 168 ~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G~~Y~l~~-~~~i~~~D~~~~~ 236 (376)
++......+ .+..++..+..-...... .+ .....+++- +|.+|+.+. .+.|..||+.+..
T Consensus 163 -l~v~~~~~~---~i~~~~~~~~~~~~~~~~-~~----~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 163 -VYVTDTDNN---RVVKLEAESNNQVVLPFT-DI----TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp -EEEEEGGGT---EEEEECTTTCCEEECCCS-SC----CSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred -EEEEECCCC---EEEEEecCCCceEeeccc-CC----CCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 222232211 456677655432221111 11 123334443 578888775 5689999997653
No 99
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=45.34 E-value=1.5e+02 Score=25.63 Aligned_cols=142 Identities=11% Similarity=0.021 Sum_probs=67.2
Q ss_pred ceEEEEeecCcEEEEEcCCCCceEEeecCCCCCCe-EEE-ecCCeEEEEeCCCCeEEEEcCCC----cc-eecCCC-ccc
Q 017173 80 PWLMYFPKFGNLYEFYDPAQRKTYSLELPELYGSR-VCY-TKDSWLLLYRPRTHRVFFFNPFT----RD-MIKLPR-FEL 151 (376)
Q Consensus 80 P~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-~~~-s~~G~ll~~~~~~~~~~l~NP~T----~~-~~~LP~-~~~ 151 (376)
|.|++...+ .....++.......+ ++.+..-. +.. ..+|.|+..+...+.++.+++-+ .. ...++. +..
T Consensus 2 ~~ll~~~~~--~I~~i~~~~~~~~~~-~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 78 (316)
T 1ijq_A 2 AYLFFTNRH--EVRKMTLDRSEYTSL-IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA 78 (316)
T ss_dssp CEEEEECBS--SEEEEETTSCCCEEE-ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC
T ss_pred CEEEEECCC--eEEEEECCCcceEeh-hcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCC
Confidence 555554332 344556666543332 33322211 112 24678888877666889999876 22 222221 111
Q ss_pred ceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEe--CCeEEEEccC--CeE
Q 017173 152 TYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC--NGIFYCLSLT--GWL 227 (376)
Q Consensus 152 ~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~--~G~~Y~l~~~--~~i 227 (376)
+ ..+++.. ..+ .+++.+...+ .+.+++.....=+.+-.. .+ ....++++. +|.+||.+.. +.|
T Consensus 79 p-~glavd~--~~~--~ly~~d~~~~---~I~~~~~~g~~~~~~~~~-~~----~~P~~iavdp~~g~ly~~d~~~~~~I 145 (316)
T 1ijq_A 79 P-DGLAVDW--IHS--NIYWTDSVLG---TVSVADTKGVKRKTLFRE-NG----SKPRAIVVDPVHGFMYWTDWGTPAKI 145 (316)
T ss_dssp C-CEEEEET--TTT--EEEEEETTTT---EEEEEETTSSSEEEEEEC-TT----CCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred c-CEEEEee--cCC--eEEEEECCCC---EEEEEeCCCCceEEEEEC-CC----CCcceEEeCCCCCEEEEEccCCCCeE
Confidence 1 2344432 111 2333333221 455666543322211111 11 234556664 7899998753 689
Q ss_pred EEEeCCCCCc
Q 017173 228 GVFDPVKRDW 237 (376)
Q Consensus 228 ~~~D~~~~~~ 237 (376)
.+++++...-
T Consensus 146 ~~~~~dG~~~ 155 (316)
T 1ijq_A 146 KKGGLNGVDI 155 (316)
T ss_dssp EEEETTSCCE
T ss_pred EEEcCCCCCe
Confidence 9999986543
No 100
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=45.03 E-value=29 Score=31.22 Aligned_cols=22 Identities=18% Similarity=0.203 Sum_probs=16.1
Q ss_pred eCCeEEEEccCCeEEEEeCCCC
Q 017173 214 CNGIFYCLSLTGWLGVFDPVKR 235 (376)
Q Consensus 214 ~~G~~Y~l~~~~~i~~~D~~~~ 235 (376)
.+|.+|+.+.+|.|.++|..++
T Consensus 9 ~~~~V~v~t~dG~l~Ald~~tG 30 (339)
T 2be1_A 9 LSDILIAADVEGGLHAVDRRNG 30 (339)
T ss_dssp EEEEEEEEETTSCEEEEETTTT
T ss_pred eCCEEEEEeCCCeEEEEECCCC
Confidence 3567777777888888887665
No 101
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=44.89 E-value=1.7e+02 Score=25.96 Aligned_cols=109 Identities=13% Similarity=0.129 Sum_probs=52.5
Q ss_pred CCeEEEEeCCCCeEEEEcCCCcceec-C--CC--cc-cceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCee
Q 017173 120 DSWLLLYRPRTHRVFFFNPFTRDMIK-L--PR--FE-LTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWV 193 (376)
Q Consensus 120 ~G~ll~~~~~~~~~~l~NP~T~~~~~-L--P~--~~-~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~ 193 (376)
+|-+++.......+.|+|.-++.... + |. +. ..-....+...|....+.+.+ .. .+ .+.+|+..++...
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~-~~-dg---~i~iwd~~~~~~~ 167 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSA-GC-DN---VILVWDVGTGAAV 167 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEE-ET-TS---CEEEEETTTTEEE
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEE-cC-CC---EEEEEECCCCCcc
Confidence 55444444444579999998875321 0 10 00 001112233334332333332 21 21 4677887766543
Q ss_pred eeccCCCCCccccceeeeEEe-CCe-EEEEccCCeEEEEeCCCCC
Q 017173 194 TDNYQNRLPFVSSIWNKLVFC-NGI-FYCLSLTGWLGVFDPVKRD 236 (376)
Q Consensus 194 ~~~~~~~~p~~~~~~~~~v~~-~G~-~Y~l~~~~~i~~~D~~~~~ 236 (376)
..-..... ......+.+. +|. ++....++.|.+||+.+..
T Consensus 168 ~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 209 (402)
T 2aq5_A 168 LTLGPDVH---PDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGT 209 (402)
T ss_dssp EEECTTTC---CSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE
T ss_pred EEEecCCC---CCceEEEEECCCCCEEEEEecCCcEEEEeCCCCc
Confidence 22100001 1234444443 554 5555678899999998754
No 102
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=43.92 E-value=1.4e+02 Score=24.78 Aligned_cols=134 Identities=10% Similarity=-0.004 Sum_probs=69.1
Q ss_pred EEEEEcCCCCceEEeecCC-CCC-CeEEEecCCeEEEEeCCCCeEEEEcCCCcceec--CCCcccceeEEEeecCCCCCC
Q 017173 91 LYEFYDPAQRKTYSLELPE-LYG-SRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIK--LPRFELTYQIVAFSCAPTSSS 166 (376)
Q Consensus 91 ~~~~~~~~~~~~~~~~lp~-~~~-~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~~--LP~~~~~~~~~~l~~~p~~~~ 166 (376)
....+++ +++...+..+. ... ..+....+|.+++.......+..+|+ +++... +|........+++ ++. +.
T Consensus 121 ~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~--~~~-g~ 195 (299)
T 2z2n_A 121 RIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITK--GND-DA 195 (299)
T ss_dssp EEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE--CTT-SS
T ss_pred eEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEE--CCC-CC
Confidence 4455677 55544444442 111 12333557777777655558999999 887654 3322211223333 332 22
Q ss_pred eEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEe-CCeEEEEc-cCCeEEEEeCCCCCceee
Q 017173 167 CVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NGIFYCLS-LTGWLGVFDPVKRDWGVL 240 (376)
Q Consensus 167 ~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G~~Y~l~-~~~~i~~~D~~~~~~~~~ 240 (376)
++......+ .+..+++ ++.......+.. ......+++- +|.+|+.+ ..+.|..||++ .....+
T Consensus 196 --l~v~~~~~~---~i~~~~~-~g~~~~~~~~~~----~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~ 260 (299)
T 2z2n_A 196 --LWFVEIIGN---KIGRITT-SGEITEFKIPTP----NARPHAITAGAGIDLWFTEWGANKIGRLTSN-NIIEEY 260 (299)
T ss_dssp --EEEEETTTT---EEEEECT-TCCEEEEECSST----TCCEEEEEECSTTCEEEEETTTTEEEEEETT-TEEEEE
T ss_pred --EEEEccCCc---eEEEECC-CCcEEEEECCCC----CCCceeEEECCCCCEEEeccCCceEEEECCC-CceEEE
Confidence 222222111 4667777 666655432211 1223344443 68888876 45789999994 334333
No 103
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=43.56 E-value=1.7e+02 Score=25.66 Aligned_cols=70 Identities=11% Similarity=0.161 Sum_probs=37.5
Q ss_pred CCe-EEEEcc-CCeEEEEeCC-CCCceeee-eCCCCCCcccccccccceeEE-EEECCcEEEEEEecCCCcEEEEEecCC
Q 017173 215 NGI-FYCLSL-TGWLGVFDPV-KRDWGVLV-VPPPKCPENFFAKNWWKGKFM-VEHKGDILVIYTCCSENPIIFKLDQSK 289 (376)
Q Consensus 215 ~G~-~Y~l~~-~~~i~~~D~~-~~~~~~~~-~p~p~~~~~~~~~~~~~~~~L-v~~~G~LllV~~~~~~~~~V~~ld~~~ 289 (376)
+|+ +|+.+. .+.|.+||++ ++....+. ...+.... ....+ +.-+|+.+.+....+..+.||.+|.++
T Consensus 155 dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~--------~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~ 226 (365)
T 1jof_A 155 TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGD--------HPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT 226 (365)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTC--------CEEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCC--------CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCC
Confidence 675 555443 5689999997 55443221 11111000 11223 233577666655445678899888765
Q ss_pred ccE
Q 017173 290 MAW 292 (376)
Q Consensus 290 ~~W 292 (376)
++.
T Consensus 227 g~~ 229 (365)
T 1jof_A 227 HMP 229 (365)
T ss_dssp CCE
T ss_pred CcE
Confidence 554
No 104
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=43.44 E-value=2.3e+02 Score=27.18 Aligned_cols=25 Identities=8% Similarity=-0.033 Sum_probs=18.5
Q ss_pred CCeEEEEeCCCCeEEEEcCCCccee
Q 017173 120 DSWLLLYRPRTHRVFFFNPFTRDMI 144 (376)
Q Consensus 120 ~G~ll~~~~~~~~~~l~NP~T~~~~ 144 (376)
+.+++......+.+.|+|..|.+.+
T Consensus 255 Gk~l~v~n~~~~~v~ViD~~t~~~~ 279 (567)
T 1qks_A 255 DKYAIAGAYWPPQYVIMDGETLEPK 279 (567)
T ss_dssp TTEEEEEEEETTEEEEEETTTCCEE
T ss_pred CCEEEEEEccCCeEEEEECCCCcEE
Confidence 4477777666668999999888754
No 105
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=42.35 E-value=2.2e+02 Score=26.65 Aligned_cols=145 Identities=10% Similarity=-0.004 Sum_probs=0.0
Q ss_pred EEEEeec-CcEEEEEcCCCCce--EEeecCCCCCCeEEEecCCeEEEEeCCCCeEEEEcCCCcceecCCCcccceeEEEe
Q 017173 82 LMYFPKF-GNLYEFYDPAQRKT--YSLELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAF 158 (376)
Q Consensus 82 l~~~~~~-~~~~~~~~~~~~~~--~~~~lp~~~~~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~l 158 (376)
++..... +....+||...++. ..+.-..-.-..+..+.+|-+++.......+.++|.-+++.+.--..........+
T Consensus 458 ~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~ 537 (615)
T 1pgu_A 458 YVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAI 537 (615)
T ss_dssp EEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEE
T ss_pred EEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEE
Q ss_pred ecCCC---------CCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEe-CCeEEEEccCCeEE
Q 017173 159 SCAPT---------SSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NGIFYCLSLTGWLG 228 (376)
Q Consensus 159 ~~~p~---------~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G~~Y~l~~~~~i~ 228 (376)
...|. ++.+++.+-... .+.+|+..++. ..+....... .....+.+. +|.+.....++.|.
T Consensus 538 ~~sp~~~~~~~~~~~~~~l~~~~~dg-----~i~iw~~~~~~-~~~~~~~~h~---~~v~~l~~s~~~~l~s~~~d~~v~ 608 (615)
T 1pgu_A 538 SWKPAEKGANEEEIEEDLVATGSLDT-----NIFIYSVKRPM-KIIKALNAHK---DGVNNLLWETPSTLVSSGADACIK 608 (615)
T ss_dssp EECCCC------CCSCCEEEEEETTS-----CEEEEESSCTT-CCEEETTSST---TCEEEEEEEETTEEEEEETTSCEE
T ss_pred EEcCccccccccccCCCEEEEEcCCC-----cEEEEECCCCc-eechhhhcCc---cceEEEEEcCCCCeEEecCCceEE
Q ss_pred EEeCCCC
Q 017173 229 VFDPVKR 235 (376)
Q Consensus 229 ~~D~~~~ 235 (376)
+||++.+
T Consensus 609 iw~~~~~ 615 (615)
T 1pgu_A 609 RWNVVLE 615 (615)
T ss_dssp EEEEC--
T ss_pred EEeeecC
No 106
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=41.90 E-value=2.4e+02 Score=27.05 Aligned_cols=31 Identities=16% Similarity=0.384 Sum_probs=24.3
Q ss_pred eeeEEeCCeEEEEccCCeEEEEeCCCCC--cee
Q 017173 209 NKLVFCNGIFYCLSLTGWLGVFDPVKRD--WGV 239 (376)
Q Consensus 209 ~~~v~~~G~~Y~l~~~~~i~~~D~~~~~--~~~ 239 (376)
..+++.+|++|+.+..+.|.++|..++. |+.
T Consensus 62 ~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~ 94 (582)
T 1flg_A 62 SQAIVSDGVIYVTASYSRLFALDAKTGKRLWTY 94 (582)
T ss_dssp CCCEEETTEEEEEETTTEEEEEESSSCCEEEEE
T ss_pred eccEEECCEEEEEcCCCCEEEEECCCCcEEEEE
Confidence 3467899999998885669999998764 654
No 107
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=41.24 E-value=1.7e+02 Score=25.02 Aligned_cols=135 Identities=10% Similarity=-0.009 Sum_probs=74.5
Q ss_pred cEEEEEcCCCCceE-EeecCCCCCCeEEEecCCeEEEEeCCCCeEEEEcCCCccee-cCCCc-ccceeEEEeecCCCCCC
Q 017173 90 NLYEFYDPAQRKTY-SLELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMI-KLPRF-ELTYQIVAFSCAPTSSS 166 (376)
Q Consensus 90 ~~~~~~~~~~~~~~-~~~lp~~~~~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~-~LP~~-~~~~~~~~l~~~p~~~~ 166 (376)
.....+|+.+++.. .++++......-+.-.++.|+......+.++++|+.|++.+ .+|.. +.. ..++.+ +.
T Consensus 44 s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g---~glt~D---g~ 117 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDG---WGLATD---GK 117 (266)
T ss_dssp CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSC---CEEEEC---SS
T ss_pred CEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCe---EEEEEC---CC
Confidence 46777898887754 45665422111122346788888776778999999998743 23321 222 223332 22
Q ss_pred eEEEEEeccCCCeEEEEEEecCCCCe-eeeccCC-CCCccccceeeeEEeCCeEEEEcc-CCeEEEEeCCCCCc
Q 017173 167 CVVFTVKHISPTVVAISTCHPGATEW-VTDNYQN-RLPFVSSIWNKLVFCNGIFYCLSL-TGWLGVFDPVKRDW 237 (376)
Q Consensus 167 ~~v~~i~~~~~~~~~~~~y~~~~~~W-~~~~~~~-~~p~~~~~~~~~v~~~G~~Y~l~~-~~~i~~~D~~~~~~ 237 (376)
... ..+ .. + .+.+.|+.+.+= ..+.... ..| ......+.+.+|.+|+-.. ++.|.++|+.+..-
T Consensus 118 ~l~-vs~-gs-~--~l~viD~~t~~v~~~I~Vg~~~~p--~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V 184 (266)
T 2iwa_A 118 ILY-GSD-GT-S--ILYEIDPHTFKLIKKHNVKYNGHR--VIRLNELEYINGEVWANIWQTDCIARISAKDGTL 184 (266)
T ss_dssp SEE-EEC-SS-S--EEEEECTTTCCEEEEEECEETTEE--CCCEEEEEEETTEEEEEETTSSEEEEEETTTCCE
T ss_pred EEE-EEC-CC-C--eEEEEECCCCcEEEEEEECCCCcc--cccceeEEEECCEEEEecCCCCeEEEEECCCCcE
Confidence 222 222 22 1 566777766432 2222210 011 1123455666999997664 68899999998653
No 108
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=39.99 E-value=1.2e+02 Score=27.21 Aligned_cols=83 Identities=18% Similarity=0.145 Sum_probs=0.0
Q ss_pred CCeEEEEc-------------cCCeEEEEeCC--CCCceeeeeCCC-CCCcccccccccceeEEEE---ECCcEEEEEEe
Q 017173 215 NGIFYCLS-------------LTGWLGVFDPV--KRDWGVLVVPPP-KCPENFFAKNWWKGKFMVE---HKGDILVIYTC 275 (376)
Q Consensus 215 ~G~~Y~l~-------------~~~~i~~~D~~--~~~~~~~~~p~p-~~~~~~~~~~~~~~~~Lv~---~~G~LllV~~~ 275 (376)
+|.+|.-+ .+|.|+.+|++ +.....+..... .....+.. .+..+.. ..+.|++|...
T Consensus 60 ~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~P----hGi~~~~d~dg~~~L~Vvnh~ 135 (355)
T 3sre_A 60 NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNP----HGISTFIDDDNTVYLLVVNHP 135 (355)
T ss_dssp TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCE----EEEEEEECTTCCEEEEEEECS
T ss_pred CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceee----eeeEEEECCCCcEEEEEEECC
Q ss_pred c-CCCcEEEEEecCCccEEEeeccCCc
Q 017173 276 C-SENPIIFKLDQSKMAWEEMKTLDGL 301 (376)
Q Consensus 276 ~-~~~~~V~~ld~~~~~W~~v~~lg~~ 301 (376)
. ...+.||++|.++...+.+.++.+.
T Consensus 136 ~~~s~ielf~~d~~~~~~~~~~~~~g~ 162 (355)
T 3sre_A 136 GSSSTVEVFKFQEEEKSLLHLKTIRHK 162 (355)
T ss_dssp TTCCEEEEEEEETTTTEEEEEEEECCT
T ss_pred CCCCeEEEEEEECCCCEEEEEeccccC
No 109
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=39.91 E-value=3.1e+02 Score=27.65 Aligned_cols=26 Identities=19% Similarity=0.138 Sum_probs=19.7
Q ss_pred CCeEEEEcc-CCeEEEEeCCCCCceee
Q 017173 215 NGIFYCLSL-TGWLGVFDPVKRDWGVL 240 (376)
Q Consensus 215 ~G~~Y~l~~-~~~i~~~D~~~~~~~~~ 240 (376)
+|.+||... .+.|.++|++...-..+
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~~~~~l 508 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGVKRKTL 508 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEE
T ss_pred CCcEEEEecCCCeEEEEeCCCCeEEEE
Confidence 679999876 57899999987654443
No 110
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=39.05 E-value=1.8e+02 Score=24.75 Aligned_cols=114 Identities=13% Similarity=0.076 Sum_probs=56.6
Q ss_pred ecCCeEEEEeCCCCeEEEEcCCCcceecCC-CcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeec
Q 017173 118 TKDSWLLLYRPRTHRVFFFNPFTRDMIKLP-RFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDN 196 (376)
Q Consensus 118 s~~G~ll~~~~~~~~~~l~NP~T~~~~~LP-~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~ 196 (376)
+.+|-|++.+.....+.++|+-+++...+. ........++++ +. +.. .++..........+..++..++.-+..-
T Consensus 53 ~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~--~d-g~l-~v~~~~~~~~~~~i~~~d~~~~~~~~~~ 128 (333)
T 2dg1_A 53 DRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIH--KD-GRL-FVCYLGDFKSTGGIFAATENGDNLQDII 128 (333)
T ss_dssp CTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEEC--TT-SCE-EEEECTTSSSCCEEEEECTTSCSCEEEE
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEEC--CC-CcE-EEEeCCCCCCCceEEEEeCCCCEEEEEE
Confidence 456766665544457999999998765432 111122234443 22 222 2221111000124667777665543221
Q ss_pred cCCCCCccccceeeeEEe-CCeEEEEcc-------CCeEEEEeCCCCCce
Q 017173 197 YQNRLPFVSSIWNKLVFC-NGIFYCLSL-------TGWLGVFDPVKRDWG 238 (376)
Q Consensus 197 ~~~~~p~~~~~~~~~v~~-~G~~Y~l~~-------~~~i~~~D~~~~~~~ 238 (376)
... .+ .....++++- +|.+|+.+. .+.|..+|+.+....
T Consensus 129 ~~~-~~--~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~ 175 (333)
T 2dg1_A 129 EDL-ST--AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT 175 (333)
T ss_dssp CSS-SS--CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE
T ss_pred ccC-cc--CCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE
Confidence 111 01 1223444433 688888765 357888998765543
No 111
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=38.95 E-value=2.8e+02 Score=27.00 Aligned_cols=37 Identities=16% Similarity=0.297 Sum_probs=21.7
Q ss_pred EEEECCcEEEEEEecC-CCcEEEEEecCCc---cEEEeecc
Q 017173 262 MVEHKGDILVIYTCCS-ENPIIFKLDQSKM---AWEEMKTL 298 (376)
Q Consensus 262 Lv~~~G~LllV~~~~~-~~~~V~~ld~~~~---~W~~v~~l 298 (376)
.+..+|+.+++..... ....|+.+|.++. .|+.+..-
T Consensus 292 ~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 332 (710)
T 2xdw_A 292 YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPE 332 (710)
T ss_dssp EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC
T ss_pred EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCC
Confidence 3445565544444333 4678888887653 58776543
No 112
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=37.94 E-value=2.9e+02 Score=26.84 Aligned_cols=138 Identities=11% Similarity=0.007 Sum_probs=70.8
Q ss_pred eEEEEcCCCcce--ec---CCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCcccc
Q 017173 132 RVFFFNPFTRDM--IK---LPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSS 206 (376)
Q Consensus 132 ~~~l~NP~T~~~--~~---LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~ 206 (376)
.+++++.-|+.. +. .+.-......+.++ | ++.++++...... ....+.+++..++.|+.+.... .
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~S--p-DG~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~------~ 272 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLS--R-DGKYLFVYILRGW-SENDVYWKRPGEKDFRLLVKGV------G 272 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCCTTCEEEEEEC--T-TSCCEEEEEEETT-TEEEEEEECTTCSSCEEEEECS------S
T ss_pred EEEEEECCCCchhceEEEecCCCCEEEEEEEEC--C-CCCEEEEEEeCCC-CceEEEEEcCCCCceEEeecCC------C
Confidence 389999888762 11 22211122233443 3 2356665544321 2345666666667787665422 1
Q ss_pred ceeeeEEeCCeEEEEcc----CCeEEEEeCCCCC---ceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecCCC
Q 017173 207 IWNKLVFCNGIFYCLSL----TGWLGVFDPVKRD---WGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSEN 279 (376)
Q Consensus 207 ~~~~~v~~~G~~Y~l~~----~~~i~~~D~~~~~---~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~~ 279 (376)
.....+..+|.+|+.+. .+.|.++|+++.. |..+.... +.. .-..+.-.+|.|++... .+..
T Consensus 273 ~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~---~~~-------~l~~~~~~~~~lv~~~~-~dg~ 341 (695)
T 2bkl_A 273 AKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPED---SSA-------SLLSVSIVGGHLSLEYL-KDAT 341 (695)
T ss_dssp CCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCC---SSC-------EEEEEEEETTEEEEEEE-ETTE
T ss_pred ceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCC---CCC-------eEEEEEEECCEEEEEEE-ECCE
Confidence 12333445777777764 4679999997654 55443211 111 00112223666655443 4455
Q ss_pred cEEEEEecCCc
Q 017173 280 PIIFKLDQSKM 290 (376)
Q Consensus 280 ~~V~~ld~~~~ 290 (376)
..||.+|..+.
T Consensus 342 ~~l~~~~~~g~ 352 (695)
T 2bkl_A 342 SEVRVATLKGK 352 (695)
T ss_dssp EEEEEEETTCC
T ss_pred EEEEEEeCCCC
Confidence 67787776543
No 113
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=37.06 E-value=2.7e+02 Score=26.18 Aligned_cols=183 Identities=12% Similarity=0.033 Sum_probs=0.0
Q ss_pred EEEEeecCcEEEEEcCCCCceEEeecCCCCCCeEEEecCCeEEEEeCCC----CeEEEEcCCCcceecCCCcccceeEEE
Q 017173 82 LMYFPKFGNLYEFYDPAQRKTYSLELPELYGSRVCYTKDSWLLLYRPRT----HRVFFFNPFTRDMIKLPRFELTYQIVA 157 (376)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~s~~G~ll~~~~~~----~~~~l~NP~T~~~~~LP~~~~~~~~~~ 157 (376)
+++.........+||+.+++...+.-... ..+..|.+|-.+...... ..++++|+-|++...|..........+
T Consensus 124 ~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~ 201 (582)
T 3o4h_A 124 VVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSAS 201 (582)
T ss_dssp EEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEE
T ss_pred EEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccce
Q ss_pred eecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeE--------Ee-CCeEEEEcc-CCeE
Q 017173 158 FSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLV--------FC-NGIFYCLSL-TGWL 227 (376)
Q Consensus 158 l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v--------~~-~G~~Y~l~~-~~~i 227 (376)
++.+ +..++ .....+...+.+++..++..+...... .....++ +- +|.+|+... ++.+
T Consensus 202 ~SpD---G~~l~---~~~~~~~~~i~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~ 269 (582)
T 3o4h_A 202 ISPG---MKVTA---GLETAREARLVTVDPRDGSVEDLELPS------KDFSSYRPTAITWLGYLPDGRLAVVARREGRS 269 (582)
T ss_dssp ECTT---SCEEE---EEECSSCEEEEEECTTTCCEEECCCSC------SHHHHHCCSEEEEEEECTTSCEEEEEEETTEE
T ss_pred ECCC---CCEEE---EccCCCeeEEEEEcCCCCcEEEccCCC------cChhhhhhccccceeEcCCCcEEEEEEcCCcE
Q ss_pred EEEeCCCCCceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecCCCcEEEEEecCCccEEEe
Q 017173 228 GVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEM 295 (376)
Q Consensus 228 ~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~~~~V~~ld~~~~~W~~v 295 (376)
..|++ +.... .+.. .-..+.-++|++++..........+|.+|.++ +..++
T Consensus 270 ~l~~~--g~~~~-------~~~~-------~v~~~~~sdg~~l~~~s~~~~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 270 AVFID--GERVE-------APQG-------NHGRVVLWRGKLVTSHTSLSTPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp EEEET--TEEEC-------CCSS-------EEEEEEEETTEEEEEEEETTEEEEEEEETTCC-EEECC
T ss_pred EEEEE--CCeec-------cCCC-------ceEEEEecCCEEEEEEcCCCCCCeEEEEcCCC-ceEEE
No 114
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=36.73 E-value=2.8e+02 Score=26.23 Aligned_cols=104 Identities=5% Similarity=-0.022 Sum_probs=55.5
Q ss_pred ecCCeEEEEeCCCCeEEEEcCCCcceec-CCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEec--CCCCeee
Q 017173 118 TKDSWLLLYRPRTHRVFFFNPFTRDMIK-LPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHP--GATEWVT 194 (376)
Q Consensus 118 s~~G~ll~~~~~~~~~~l~NP~T~~~~~-LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~--~~~~W~~ 194 (376)
+.+|.++......+.+.++|+-|++.+. ++.-. ....++++.+ +.++. ..+.. -.+.+|+. .+.+-
T Consensus 146 ~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~-~~~~v~~spd---g~~l~-v~~~d----~~V~v~D~~~~t~~~-- 214 (543)
T 1nir_A 146 DLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSAS---GRYLL-VIGRD----ARIDMIDLWAKEPTK-- 214 (543)
T ss_dssp CGGGEEEEEEGGGTEEEEEETTTCCEEEEEECST-TEEEEEECTT---SCEEE-EEETT----SEEEEEETTSSSCEE--
T ss_pred CCCCEEEEEEcCCCeEEEEECCCceEEEEEecCc-ccceEEECCC---CCEEE-EECCC----CeEEEEECcCCCCcE--
Confidence 3466666666555689999999987542 33111 1223444432 34433 32322 25778887 44322
Q ss_pred eccCCCCCccccceeeeEEe-----CCe-EEEEcc-CCeEEEEeCCCCC
Q 017173 195 DNYQNRLPFVSSIWNKLVFC-----NGI-FYCLSL-TGWLGVFDPVKRD 236 (376)
Q Consensus 195 ~~~~~~~p~~~~~~~~~v~~-----~G~-~Y~l~~-~~~i~~~D~~~~~ 236 (376)
+.. ++. ......+++. +|+ +|+... .+.|.+||..+..
T Consensus 215 ~~~---i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 215 VAE---IKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp EEE---EEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred EEE---Eec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 111 110 0223445554 575 666654 6889999987754
No 115
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=36.59 E-value=69 Score=28.68 Aligned_cols=23 Identities=9% Similarity=0.076 Sum_probs=20.4
Q ss_pred eCCeEEEEccCCeEEEEeCCCCC
Q 017173 214 CNGIFYCLSLTGWLGVFDPVKRD 236 (376)
Q Consensus 214 ~~G~~Y~l~~~~~i~~~D~~~~~ 236 (376)
.+|.+|+...++.++++|+.++.
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGE 132 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCC
T ss_pred cCCEEEEEecCCEEEEEECCCCc
Confidence 78999999999999999998875
No 116
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=35.97 E-value=3.1e+02 Score=26.49 Aligned_cols=56 Identities=13% Similarity=0.026 Sum_probs=32.4
Q ss_pred cEEEEEcCCCCceEEeecCCCCCCeEEEecCC-eEEEEeCCCCeEEEEcCCC-----cceecCC
Q 017173 90 NLYEFYDPAQRKTYSLELPELYGSRVCYTKDS-WLLLYRPRTHRVFFFNPFT-----RDMIKLP 147 (376)
Q Consensus 90 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~s~~G-~ll~~~~~~~~~~l~NP~T-----~~~~~LP 147 (376)
....++|+.+++...+.-..-....+.-|.+| .|+.... ..++++|.-+ ++...+-
T Consensus 101 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~--~~i~v~~~~~~~~~~g~~~~~~ 162 (706)
T 2z3z_A 101 GGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRN--HNLYIARGGKLGEGMSRAIAVT 162 (706)
T ss_dssp TEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEET--TEEEEEECBCTTSCCCCCEESC
T ss_pred CEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEEC--CeEEEEecCcccccCCCcEEec
Confidence 45677888777665543221111223346666 4544432 4899999998 8766543
No 117
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=35.67 E-value=3.1e+02 Score=26.49 Aligned_cols=31 Identities=10% Similarity=0.090 Sum_probs=24.7
Q ss_pred eeeEEeCCeEEEEcc-CCeEEEEeC-CCCC--cee
Q 017173 209 NKLVFCNGIFYCLSL-TGWLGVFDP-VKRD--WGV 239 (376)
Q Consensus 209 ~~~v~~~G~~Y~l~~-~~~i~~~D~-~~~~--~~~ 239 (376)
..+++.+|++|+.+. ++.|.++|. .++. |+.
T Consensus 56 ~tP~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~ 90 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFPNNTFALGLDDPGTILWQD 90 (599)
T ss_dssp SCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEE
T ss_pred eccEEECCEEEEEeCCCCEEEEEeCCCCCcEEEEE
Confidence 456778999999988 889999999 6654 643
No 118
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=35.52 E-value=2.2e+02 Score=24.70 Aligned_cols=153 Identities=12% Similarity=0.041 Sum_probs=73.1
Q ss_pred CeEEEEcCCCcceecCCCcc--cceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccce
Q 017173 131 HRVFFFNPFTRDMIKLPRFE--LTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIW 208 (376)
Q Consensus 131 ~~~~l~NP~T~~~~~LP~~~--~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~ 208 (376)
..++++|.-++....+.... .....+.++ |. +.++++...........+.+++..++..+.+... + ..
T Consensus 216 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~s--pd-g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~---~----~~ 285 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKEHAEGESCTHEFWI--PD-GSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM---P----PC 285 (396)
T ss_dssp CCCEEEETTSCCCEESSCCCTTEEEEEEEEC--TT-SSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC---C----SE
T ss_pred ceEEEEECCCCceeEeeccCCCccccceEEC--CC-CCEEEEEecCCCCccceEEEEECCCCCeEEeeeC---C----CC
Confidence 36889998887766554421 112223443 32 3444444332222223477888777765544321 1 11
Q ss_pred eeeEE-e-CCeEEEEcc-----------------CCeEEEEeCCCCCceeeeeCCCCCCcccccccc-cceeEEEEECCc
Q 017173 209 NKLVF-C-NGIFYCLSL-----------------TGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNW-WKGKFMVEHKGD 268 (376)
Q Consensus 209 ~~~v~-~-~G~~Y~l~~-----------------~~~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~-~~~~~Lv~~~G~ 268 (376)
. ..+ - +|++++... ...|..+|+.++....+...... ...+..... .....-..-+|+
T Consensus 286 ~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~s~dg~ 363 (396)
T 3c5m_A 286 S-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTS-WDVLDGDRQITHPHPSFTPNDD 363 (396)
T ss_dssp E-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCC-CCCBTTBSSTTCCCCEECTTSS
T ss_pred C-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCc-cccccccccCCCCCceEccCCC
Confidence 1 333 2 787665432 35799999987665433221110 000000000 000011223576
Q ss_pred EEEEEEecCCCcEEEEEecCCccEEEe
Q 017173 269 ILVIYTCCSENPIIFKLDQSKMAWEEM 295 (376)
Q Consensus 269 LllV~~~~~~~~~V~~ld~~~~~W~~v 295 (376)
.+++.........||.+|..+..+..+
T Consensus 364 ~l~~~s~~~~~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 364 GVLFTSDFEGVPAIYIADVPESYKHLE 390 (396)
T ss_dssp EEEEEECTTSSCEEEEEECCTTCC---
T ss_pred eEEEEecCCCCceEEEEEEcccccccc
Confidence 555555455667899998776655443
No 119
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=34.90 E-value=2.3e+02 Score=24.66 Aligned_cols=144 Identities=8% Similarity=0.014 Sum_probs=67.1
Q ss_pred CCceEEEEeecCcEEEEEcCCCCc-eEEeecCCCCCCeEEE--ecCCeEEEEeCCCCeEEEEcCCCccee--cCC-Cccc
Q 017173 78 QSPWLMYFPKFGNLYEFYDPAQRK-TYSLELPELYGSRVCY--TKDSWLLLYRPRTHRVFFFNPFTRDMI--KLP-RFEL 151 (376)
Q Consensus 78 ~~P~l~~~~~~~~~~~~~~~~~~~-~~~~~lp~~~~~~~~~--s~~G~ll~~~~~~~~~~l~NP~T~~~~--~LP-~~~~ 151 (376)
+.|+|++... ......++.... -+.+.++.+....-+. ...|.|+..+...+.+..+++-++... .+. .+..
T Consensus 3 ~~p~ll~~~~--~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~ 80 (318)
T 3sov_A 3 SAPLLLYANR--RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLS 80 (318)
T ss_dssp -CCEEEEECE--EEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSC
T ss_pred CccEEEEEcc--CeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCC
Confidence 4577765443 234445665543 2223222211111111 236788888766667888888766321 111 1111
Q ss_pred ceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEe--CCeEEEEcc--CCeE
Q 017173 152 TYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC--NGIFYCLSL--TGWL 227 (376)
Q Consensus 152 ~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~--~G~~Y~l~~--~~~i 227 (376)
...+++.. ..+ .+++.+... + .+.+++.....=+.+.. ..+ ....++++. +|.+||... .+.|
T Consensus 81 -p~glavd~--~~g--~ly~~d~~~-~--~I~~~~~dG~~~~~l~~-~~~----~~P~giavdp~~g~ly~td~~~~~~I 147 (318)
T 3sov_A 81 -PDGLACDW--LGE--KLYWTDSET-N--RIEVSNLDGSLRKVLFW-QEL----DQPRAIALDPSSGFMYWTDWGEVPKI 147 (318)
T ss_dssp -CCEEEEET--TTT--EEEEEETTT-T--EEEEEETTSCSCEEEEC-SSC----SSEEEEEEEGGGTEEEEEECSSSCEE
T ss_pred -ccEEEEEc--CCC--eEEEEECCC-C--EEEEEECCCCcEEEEEe-CCC----CCccEEEEeCCCCEEEEEecCCCCEE
Confidence 11233321 111 233333222 1 45566654322122211 111 223455554 689999874 5789
Q ss_pred EEEeCCCCC
Q 017173 228 GVFDPVKRD 236 (376)
Q Consensus 228 ~~~D~~~~~ 236 (376)
.+++++...
T Consensus 148 ~r~~~dG~~ 156 (318)
T 3sov_A 148 ERAGMDGSS 156 (318)
T ss_dssp EEEETTSCS
T ss_pred EEEEcCCCC
Confidence 999998654
No 120
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=33.37 E-value=2e+02 Score=23.67 Aligned_cols=134 Identities=9% Similarity=0.026 Sum_probs=66.3
Q ss_pred EEEEEcCCCCceEEeecCC-CCC-CeEEEecCCeEEEEeCCCCeEEEEcCCCcceecC--CCcccceeEEEeecCCCCCC
Q 017173 91 LYEFYDPAQRKTYSLELPE-LYG-SRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKL--PRFELTYQIVAFSCAPTSSS 166 (376)
Q Consensus 91 ~~~~~~~~~~~~~~~~lp~-~~~-~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~~L--P~~~~~~~~~~l~~~p~~~~ 166 (376)
....+++. ++...+.++. ... ..+....+|-|++.......+..+|+ +++...+ |........+++ ++. +.
T Consensus 126 ~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~--d~~-g~ 200 (300)
T 2qc5_A 126 RIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITS--GND-GA 200 (300)
T ss_dssp EEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE--CTT-SS
T ss_pred eEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEE--CCC-CC
Confidence 34456666 4444444542 111 12233456767777654557999999 7765443 221111122333 332 22
Q ss_pred eEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEe-CCeEEEEcc-CCeEEEEeCCCCCceee
Q 017173 167 CVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NGIFYCLSL-TGWLGVFDPVKRDWGVL 240 (376)
Q Consensus 167 ~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G~~Y~l~~-~~~i~~~D~~~~~~~~~ 240 (376)
++...... + .+..+++ ++.......+... .....+++- +|.+|+.+. .+.|..||++ .....+
T Consensus 201 --l~v~~~~~-~--~i~~~~~-~g~~~~~~~~~~~----~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~ 265 (300)
T 2qc5_A 201 --LWFVEIMG-N--KIGRITT-TGEISEYDIPTPN----ARPHAITAGKNSEIWFTEWGANQIGRITND-NTIQEY 265 (300)
T ss_dssp --EEEEETTT-T--EEEEECT-TCCEEEEECSSTT----CCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred --EEEEccCC-C--EEEEEcC-CCcEEEEECCCCC----CCceEEEECCCCCEEEeccCCCeEEEECCC-CcEEEE
Confidence 22222211 1 4566776 5555544322111 223333333 688888775 4789999994 444433
No 121
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=32.14 E-value=17 Score=21.86 Aligned_cols=21 Identities=24% Similarity=0.439 Sum_probs=16.9
Q ss_pred cCCCCCCccHHHHHHHHhcCC
Q 017173 32 ELHDWSELPAELLELIMCHLT 52 (376)
Q Consensus 32 ~~~~Ws~LP~dll~~Il~rLp 52 (376)
++.-+.+||.||-.+|++--.
T Consensus 17 D~eVF~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 17 DQEVFKQLPADIQEEILSGKS 37 (48)
T ss_dssp CGGGTTTSCHHHHHHHTTCCC
T ss_pred CHHHHHHCcHHHHHHHHhcch
Confidence 556688999999999987654
No 122
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=31.96 E-value=2.3e+02 Score=23.76 Aligned_cols=128 Identities=12% Similarity=0.002 Sum_probs=62.7
Q ss_pred cEEEEEcCCCCceEE-eecCCCCCCeEEEecCCeEEEEeCCCCeEEEEcCCCcceecCCCcccceeEEEeecCCCCCCeE
Q 017173 90 NLYEFYDPAQRKTYS-LELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSCV 168 (376)
Q Consensus 90 ~~~~~~~~~~~~~~~-~~lp~~~~~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~l~~~p~~~~~~ 168 (376)
....+||+...+... +..+. .-..+..+.+|-+++.......+.++|.-++....+.........+.++. ++.++
T Consensus 205 g~i~~~d~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l 280 (337)
T 1gxr_A 205 NTVRSWDLREGRQLQQHDFTS-QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAY---CGKWF 280 (337)
T ss_dssp SEEEEEETTTTEEEEEEECSS-CEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECT---TSSEE
T ss_pred CcEEEEECCCCceEeeecCCC-ceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECC---CCCEE
Confidence 345667776654332 23221 11122234555444444444579999998887665544433333444442 22343
Q ss_pred EEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEe-CCe-EEEEccCCeEEEEeC
Q 017173 169 VFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NGI-FYCLSLTGWLGVFDP 232 (376)
Q Consensus 169 v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G~-~Y~l~~~~~i~~~D~ 232 (376)
+.+ .. .+ .+.+|+..++.-...... ......+.+. +|. ++....++.|.+||+
T Consensus 281 ~~~-~~-dg---~i~~~~~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 281 VST-GK-DN---LLNAWRTPYGASIFQSKE------SSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEE-ET-TS---EEEEEETTTCCEEEEEEC------SSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEe-cC-CC---cEEEEECCCCeEEEEecC------CCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 333 22 21 567787766543321111 0223333333 444 444556778888875
No 123
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=31.67 E-value=2.4e+02 Score=24.03 Aligned_cols=151 Identities=11% Similarity=-0.035 Sum_probs=77.1
Q ss_pred CCeEEEEeCCC--CeEEEEcCCCcce---ecCCCccccee-EEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCee
Q 017173 120 DSWLLLYRPRT--HRVFFFNPFTRDM---IKLPRFELTYQ-IVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWV 193 (376)
Q Consensus 120 ~G~ll~~~~~~--~~~~l~NP~T~~~---~~LP~~~~~~~-~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~ 193 (376)
+|.|+...... ..+.++|+.||+. +.||+- .|. .+++.. + .++.+.... ..+.+||..+.+=.
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~--~FgeGit~~g-----~-~ly~ltw~~---~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR--YFGEGISDWK-----D-KIVGLTWKN---GLGFVWNIRNLRQV 120 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT--CCEEEEEEET-----T-EEEEEESSS---SEEEEEETTTCCEE
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc--cceeEEEEeC-----C-EEEEEEeeC---CEEEEEECccCcEE
Confidence 67777766542 3699999999985 334432 222 123321 2 333333222 25678888775432
Q ss_pred -eeccCCCCCccccceeeeEEeCCeEEEEccCCeEEEEeCCCCCc-eeeeeCCCCCCcccccccccceeEEEEECCcEEE
Q 017173 194 -TDNYQNRLPFVSSIWNKLVFCNGIFYCLSLTGWLGVFDPVKRDW-GVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILV 271 (376)
Q Consensus 194 -~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~~~~i~~~D~~~~~~-~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~Lll 271 (376)
.++... . -.....-++.+|.-+.++.|..+|+.+..- +.+.+..-..|.. .-.-|.-.+|+|+
T Consensus 121 ~ti~~~~-e------G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~-------~lNELe~~~G~ly- 185 (262)
T 3nol_A 121 RSFNYDG-E------GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELP-------ELNELEWVDGEIF- 185 (262)
T ss_dssp EEEECSS-C------CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECC-------CEEEEEEETTEEE-
T ss_pred EEEECCC-C------ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcccc-------ccceeEEECCEEE-
Confidence 233221 1 112233355688777678899999997542 2232211000100 0001222378877
Q ss_pred EEEecCCCcEEEEEecCCccEEEeecc
Q 017173 272 IYTCCSENPIIFKLDQSKMAWEEMKTL 298 (376)
Q Consensus 272 V~~~~~~~~~V~~ld~~~~~W~~v~~l 298 (376)
+....+ -.|.++|.++++=...-++
T Consensus 186 an~w~~--~~I~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 186 ANVWQT--NKIVRIDPETGKVTGIIDL 210 (262)
T ss_dssp EEETTS--SEEEEECTTTCBEEEEEEC
T ss_pred EEEccC--CeEEEEECCCCcEEEEEEC
Confidence 444332 3688889887653333333
No 124
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=31.47 E-value=2.9e+02 Score=24.86 Aligned_cols=145 Identities=10% Similarity=-0.004 Sum_probs=67.3
Q ss_pred CCceEEEEeecCcEEEEEcCCCCceEEeecCCCCCCeEEE--ecCCeEEEEeCCCCeEEEEcCCCcc----eecC-C-Cc
Q 017173 78 QSPWLMYFPKFGNLYEFYDPAQRKTYSLELPELYGSRVCY--TKDSWLLLYRPRTHRVFFFNPFTRD----MIKL-P-RF 149 (376)
Q Consensus 78 ~~P~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~--s~~G~ll~~~~~~~~~~l~NP~T~~----~~~L-P-~~ 149 (376)
..|+|++... ......++.......+ ++.+....-+. ..+|.|+..+...+.++.+++-.+. ...+ . .+
T Consensus 82 ~~~~ll~~~~--~~I~~i~l~~~~~~~~-~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 158 (400)
T 3p5b_L 82 SIAYLFFTNR--HEVRKMTLDRSEYTSL-IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 158 (400)
T ss_dssp TSCEEEEEET--TEEEEECTTSCSCEEE-ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC
T ss_pred ccceeEEecc--ceeEEEccCCcceeEe-ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC
Confidence 4566654332 3445556665543332 23222211122 2478888887766678888876421 1111 1 11
Q ss_pred ccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEe--CCeEEEEcc--CC
Q 017173 150 ELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC--NGIFYCLSL--TG 225 (376)
Q Consensus 150 ~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~--~G~~Y~l~~--~~ 225 (376)
. ....+++.. ..+ .+++.+...+ .+.+++.....-+.+-.. .+ ....++++. +|.+||.+. .+
T Consensus 159 ~-~p~glavD~--~~~--~lY~~d~~~~---~I~~~~~~g~~~~~l~~~-~~----~~P~~iavdp~~g~ly~td~~~~~ 225 (400)
T 3p5b_L 159 Q-APDGLAVDW--IHS--NIYWTDSVLG---TVSVADTKGVKRKTLFRE-NG----SKPRAIVVDPVHGFMYWTDWGTPA 225 (400)
T ss_dssp S-CEEEEEEET--TTT--EEEEEETTTT---EEEEECTTTCSEEEEEEC-SS----CCEEEEEEETTTTEEEEEECSSSC
T ss_pred C-CcccEEEEe--cCC--ceEEEECCCC---eEEEEeCCCCceEEEEeC-CC----CCcceEEEecccCeEEEEeCCCCC
Confidence 1 111233332 111 2333333221 445555544333322211 11 224455653 789999874 36
Q ss_pred eEEEEeCCCCCce
Q 017173 226 WLGVFDPVKRDWG 238 (376)
Q Consensus 226 ~i~~~D~~~~~~~ 238 (376)
.|..++++...-.
T Consensus 226 ~I~~~~~dG~~~~ 238 (400)
T 3p5b_L 226 KIKKGGLNGVDIY 238 (400)
T ss_dssp CEEEEETTSCSCE
T ss_pred EEEEEeCCCCccE
Confidence 8999999875433
No 125
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=31.00 E-value=2.5e+02 Score=23.98 Aligned_cols=190 Identities=9% Similarity=0.031 Sum_probs=87.0
Q ss_pred cEEEEEcCCCCceEEe-ecCCCCC--CeEEEecC--CeEEEEeCCCCeEEEEcCCCccee---cCCCcccceeEEEeecC
Q 017173 90 NLYEFYDPAQRKTYSL-ELPELYG--SRVCYTKD--SWLLLYRPRTHRVFFFNPFTRDMI---KLPRFELTYQIVAFSCA 161 (376)
Q Consensus 90 ~~~~~~~~~~~~~~~~-~lp~~~~--~~~~~s~~--G~ll~~~~~~~~~~l~NP~T~~~~---~LP~~~~~~~~~~l~~~ 161 (376)
....++|...+++..+ .+..... ..+..+.+ |-+++.......+.++|..++... .+.........+.+ .
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~--~ 156 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW--A 156 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEE--C
T ss_pred CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEE--c
Confidence 4566777777654332 2221111 11222433 444443333457999998877432 12111112222333 3
Q ss_pred CC------------CCCeEEEEEeccCCCeEEEEEEecCC--CCeeeeccCCCCCccccceeeeEEe-C---Ce-EEEEc
Q 017173 162 PT------------SSSCVVFTVKHISPTVVAISTCHPGA--TEWVTDNYQNRLPFVSSIWNKLVFC-N---GI-FYCLS 222 (376)
Q Consensus 162 p~------------~~~~~v~~i~~~~~~~~~~~~y~~~~--~~W~~~~~~~~~p~~~~~~~~~v~~-~---G~-~Y~l~ 222 (376)
|. .+.+++.+- . .+ .+.+|+..+ ..|......... ......+.+. + |. +....
T Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~-~-dg---~i~i~d~~~~~~~~~~~~~~~~h---~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 157 PATIEEDGEHNGTKESRKFVTGG-A-DN---LVKIWKYNSDAQTYVLESTLEGH---SDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp CCC----------CTTCEEEEEE-T-TS---CEEEEEEETTTTEEEEEEEECCC---SSCEEEEEECCCCSSSEEEEEEE
T ss_pred CccccccccccCCCCCCEEEEEe-C-CC---eEEEEEecCCCcceeeEEEEecc---cCcEeEEEECCCCCCCCeEEEEe
Confidence 32 234433332 1 21 355665543 345433321111 1234444444 2 44 44455
Q ss_pred cCCeEEEEeCCCCCcee-eeeCCCCCCccccccccccee-EE-EEECCcEEEEEEecCCCcEEEEEecCCccEEEeeccC
Q 017173 223 LTGWLGVFDPVKRDWGV-LVVPPPKCPENFFAKNWWKGK-FM-VEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMKTLD 299 (376)
Q Consensus 223 ~~~~i~~~D~~~~~~~~-~~~p~p~~~~~~~~~~~~~~~-~L-v~~~G~LllV~~~~~~~~~V~~ld~~~~~W~~v~~lg 299 (376)
.++.|.+||+.+..... ....... ... ... .+ ...+|.++++.. .++.+.||.++.. .+|..+..+.
T Consensus 229 ~dg~i~iwd~~~~~~~~~~~~~~~~-~~~-------~~v~~~~~s~~g~~l~~~~-~dg~i~iw~~~~~-~~~~~~~~~~ 298 (379)
T 3jrp_A 229 QDRTCIIWTQDNEQGPWKKTLLKEE-KFP-------DVLWRASWSLSGNVLALSG-GDNKVTLWKENLE-GKWEPAGEVH 298 (379)
T ss_dssp TTSCEEEEEESSTTSCCEEEESSSS-CCS-------SCEEEEEECSSSCCEEEEE-SSSSEEEEEEEET-TEEEEEEEEC
T ss_pred CCCEEEEEeCCCCCccceeeeeccc-cCC-------CcEEEEEEcCCCCEEEEec-CCCcEEEEeCCCC-Ccccccccee
Confidence 67889999998753211 1111100 000 111 11 123466555444 4677999988753 5688877654
No 126
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=29.80 E-value=2.8e+02 Score=24.08 Aligned_cols=104 Identities=13% Similarity=-0.017 Sum_probs=51.2
Q ss_pred CeEEEEeCCCCeEEEEcCCCcc-eecCCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCC---Ceeeec
Q 017173 121 SWLLLYRPRTHRVFFFNPFTRD-MIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGAT---EWVTDN 196 (376)
Q Consensus 121 G~ll~~~~~~~~~~l~NP~T~~-~~~LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~---~W~~~~ 196 (376)
..|++... +.+..+++-++. ...++... .-..+++..++..+ .+++.+... + .+..++..+. .+.. .
T Consensus 5 p~ll~~~~--~~I~~i~l~~~~~~~~~~~~~-~~~~~~ld~d~~~~--~lyw~D~~~-~--~I~r~~~~g~~~~~~~~-~ 75 (318)
T 3sov_A 5 PLLLYANR--RDLRLVDATNGKENATIVVGG-LEDAAAVDFVFSHG--LIYWSDVSE-E--AIKRTEFNKTESVQNVV-V 75 (318)
T ss_dssp CEEEEECE--EEEEEEETTCTTSCCEEEEEE-EEEEEEEEEEGGGT--EEEEEETTT-T--EEEEEETTSSSCCCEEE-E
T ss_pred cEEEEEcc--CeEEEEECCCCceEEEEEecC-CCccEEEEEEeCCC--EEEEEECCC-C--cEEEEEccCCCceEEEE-c
Confidence 45666543 378888887653 22222111 11234444443222 345544322 2 3445554432 1221 1
Q ss_pred cCCCCCccccceeeeEE--eCCeEEEEcc-CCeEEEEeCCCCCcee
Q 017173 197 YQNRLPFVSSIWNKLVF--CNGIFYCLSL-TGWLGVFDPVKRDWGV 239 (376)
Q Consensus 197 ~~~~~p~~~~~~~~~v~--~~G~~Y~l~~-~~~i~~~D~~~~~~~~ 239 (376)
.. + .....+++ .+|.+||... .+.|.++|++...-..
T Consensus 76 ~~--l----~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 76 SG--L----LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp EC--C----SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CC--C----CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 11 1 12234444 3789999875 5789999998754333
No 127
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=29.73 E-value=2.4e+02 Score=23.46 Aligned_cols=105 Identities=9% Similarity=0.060 Sum_probs=50.8
Q ss_pred ecCC-eEEEEeCCCCeEEEEcCCCcceecCCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeec
Q 017173 118 TKDS-WLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDN 196 (376)
Q Consensus 118 s~~G-~ll~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~ 196 (376)
+.+| .|+..+.....+..+||-++ ...+.........++++ +. +. +.++ .... ..+..+++.+++.+...
T Consensus 36 d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~--~d-g~-l~v~-~~~~---~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 36 VPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLN--KQ-GH-LIAC-SHGL---RRLERQREPGGEWESIA 106 (296)
T ss_dssp EGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEEC--TT-CC-EEEE-ETTT---TEEEEECSTTCCEEEEE
T ss_pred eCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeEC--CC-Cc-EEEE-ecCC---CeEEEEcCCCCcEEEEe
Confidence 3344 35555444457889999888 43332211112233333 32 22 2222 2211 15677887777665443
Q ss_pred cCC-CCCccccceeeeEEe-CCeEEEEcc------------------CCeEEEEeCC
Q 017173 197 YQN-RLPFVSSIWNKLVFC-NGIFYCLSL------------------TGWLGVFDPV 233 (376)
Q Consensus 197 ~~~-~~p~~~~~~~~~v~~-~G~~Y~l~~------------------~~~i~~~D~~ 233 (376)
... ..+ .....++++- +|.+|+.+. .+.|+.+|..
T Consensus 107 ~~~~~~~--~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (296)
T 3e5z_A 107 DSFEGKK--LNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD 161 (296)
T ss_dssp CEETTEE--CCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT
T ss_pred eccCCCC--CCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC
Confidence 211 000 1122333333 788888521 3478888887
No 128
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=28.77 E-value=92 Score=28.39 Aligned_cols=82 Identities=10% Similarity=0.061 Sum_probs=52.3
Q ss_pred EEEECCcEEEEEEecC------------CCcEEEEEecCCc--cEEEeeccCCcEEEeeCCc---ccccC-CCC--cccc
Q 017173 262 MVEHKGDILVIYTCCS------------ENPIIFKLDQSKM--AWEEMKTLDGLTLFASFLS---SQSRA-DLP--GIMR 321 (376)
Q Consensus 262 Lv~~~G~LllV~~~~~------------~~~~V~~ld~~~~--~W~~v~~lg~~~lFlg~~~---s~~~~-~~~--g~~~ 321 (376)
-++..|+|+++..... ...++..+|..+. +=.+...|+...+- .++ .+... ..+ .+.+
T Consensus 93 ~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~--~~S~l~di~VD~~~~~~~c~~ 170 (381)
T 3q6k_A 93 VIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVE--KPTYFGGFAVDVANPKGDCSE 170 (381)
T ss_dssp EECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCC--CGGGEEEEEEEESCTTTTSCS
T ss_pred EEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcc--cCCccceEEEecccCCCCCCc
Confidence 3445699999976431 1247888899888 88888888754431 111 11122 111 2346
Q ss_pred CeEEEcccccCCceEEEEecCCceee
Q 017173 322 NSVYFSKVRFFGKRCISYSLNDSRYY 347 (376)
Q Consensus 322 n~Iyf~~~~~~~~~~~vy~l~~~~~~ 347 (376)
..+|++|. ....++|||+++++-.
T Consensus 171 ~~aYItD~--~~~gLIVydl~~~~sw 194 (381)
T 3q6k_A 171 TFVYITNF--LRGALFIYDHKKQDSW 194 (381)
T ss_dssp EEEEEEET--TTTEEEEEETTTTEEE
T ss_pred cEEEEEcC--CCCcEEEEECCCCcEE
Confidence 78999997 3567889999988633
No 129
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=28.37 E-value=2.8e+02 Score=23.74 Aligned_cols=147 Identities=10% Similarity=-0.026 Sum_probs=78.1
Q ss_pred ecCCeEEEEeCCCCeEEEEcCCCcceec--CCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCee-e
Q 017173 118 TKDSWLLLYRPRTHRVFFFNPFTRDMIK--LPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWV-T 194 (376)
Q Consensus 118 s~~G~ll~~~~~~~~~~l~NP~T~~~~~--LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~-~ 194 (376)
-.++.|+........+.++|+.||+.+. ||+-.+. -.+++.. + .++.+.... ..+.+||..+.+=. .
T Consensus 62 ~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~Fg-eGit~~g-----~-~Ly~ltw~~---~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 62 FHQGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFA-EGLASDG-----E-RLYQLTWTE---GLLFTWSGMPPQRERT 131 (268)
T ss_dssp EETTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCE-EEEEECS-----S-CEEEEESSS---CEEEEEETTTTEEEEE
T ss_pred EECCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcce-eEEEEeC-----C-EEEEEEccC---CEEEEEECCcCcEEEE
Confidence 3478888887766679999999998532 5543211 1122221 2 233333222 25778888765432 2
Q ss_pred eccCCCCCccccceeeeEEeCCeEEEEccCCeEEEEeCCCCCc-eeeeeCCCCCCcccccccccceeEEEEECCcEEEEE
Q 017173 195 DNYQNRLPFVSSIWNKLVFCNGIFYCLSLTGWLGVFDPVKRDW-GVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIY 273 (376)
Q Consensus 195 ~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~~~~i~~~D~~~~~~-~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~ 273 (376)
++..+ . -.....-++.+|.-+.++.|..+|+.+..- +.+.+.. .+.... .-.-|.-.+|+|+ +.
T Consensus 132 i~~~~------e-GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~--~g~~v~-----~lNeLe~~dG~ly-an 196 (268)
T 3nok_A 132 TRYSG------E-GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKL--RGQPVE-----LINELECANGVIY-AN 196 (268)
T ss_dssp EECSS------C-CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEE--TTEECC-----CEEEEEEETTEEE-EE
T ss_pred EeCCC------c-eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCC--CCcccc-----cccccEEeCCEEE-EE
Confidence 33221 1 123334466788887788999999987542 2232211 111100 0011222378877 44
Q ss_pred EecCCCcEEEEEecCCcc
Q 017173 274 TCCSENPIIFKLDQSKMA 291 (376)
Q Consensus 274 ~~~~~~~~V~~ld~~~~~ 291 (376)
...+ -.|.++|.++++
T Consensus 197 vw~s--~~I~vIDp~TG~ 212 (268)
T 3nok_A 197 IWHS--SDVLEIDPATGT 212 (268)
T ss_dssp ETTC--SEEEEECTTTCB
T ss_pred ECCC--CeEEEEeCCCCc
Confidence 4333 378888988764
No 130
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=28.21 E-value=2.7e+02 Score=23.48 Aligned_cols=63 Identities=14% Similarity=0.115 Sum_probs=38.0
Q ss_pred EEEEeecCcEEEEEcCCCCceE-EeecCCC-CCCeEEEecCC-eEEEEeCCCCeEEEEcCCCccee
Q 017173 82 LMYFPKFGNLYEFYDPAQRKTY-SLELPEL-YGSRVCYTKDS-WLLLYRPRTHRVFFFNPFTRDMI 144 (376)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~~~-~~~lp~~-~~~~~~~s~~G-~ll~~~~~~~~~~l~NP~T~~~~ 144 (376)
++..........++|+.+++.. .++++.. ....+..+.+| .+++.......+.++|+-|++.+
T Consensus 13 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 13 YMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT 78 (349)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEE
Confidence 3333334456778898877653 4555541 22334446565 56666554558999999998754
No 131
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=28.04 E-value=3.1e+02 Score=24.06 Aligned_cols=165 Identities=10% Similarity=0.034 Sum_probs=79.7
Q ss_pred eehhccccccccCccccC---CCCCCceEEEEeecCcEEEEEcCCCCceEEeecCCCCCCeEEE--ecCCeEEEEeCCCC
Q 017173 57 VHASVVCKKWHAPAISVR---VVNQSPWLMYFPKFGNLYEFYDPAQRKTYSLELPELYGSRVCY--TKDSWLLLYRPRTH 131 (376)
Q Consensus 57 ~r~r~VCk~Wrs~~~~~~---~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~--s~~G~ll~~~~~~~ 131 (376)
-.++|.|..=..+..+.+ .....|+|++...+ ...-.++.+.... ..++.+....-+. ..+|.|+..+...+
T Consensus 19 g~~~C~C~~g~~l~~d~~~C~~~~~~~~ll~~~~~--~I~~i~~~g~~~~-~~~~~~~~~~~l~~d~~~~~ly~~D~~~~ 95 (349)
T 3v64_C 19 GAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRI--DIRQVLPHRSEYT-LLLNNLENAIALDFHHRRELVFWSDVTLD 95 (349)
T ss_dssp --CCEECCTTEEECTTSSCEEESSSCCEEEEECBS--CEEEECTTSCCEE-EEECSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCeEEECCCCccCCCCCCcccccccCceeEeeccc--ceEEEeCCCCeeE-EeecCCCceEEEEEeccccEEEEEeccCC
Confidence 456677765433332221 12235666654332 2344566554432 2233322211122 25788888877666
Q ss_pred eEEEEcCCCcceecCC--CcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCcccccee
Q 017173 132 RVFFFNPFTRDMIKLP--RFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWN 209 (376)
Q Consensus 132 ~~~l~NP~T~~~~~LP--~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~ 209 (376)
.++.+++-++....+. .+..+ ..+++.. ..+ .+++.+.... .+.+++.....-+.+... .+ ....
T Consensus 96 ~I~r~~~~g~~~~~~~~~~~~~p-~glavd~--~~g--~ly~~d~~~~---~I~~~~~dG~~~~~l~~~-~l----~~P~ 162 (349)
T 3v64_C 96 RILRANLNGSNVEEVVSTGLESP-GGLAVDW--VHD--KLYWTDSGTS---RIEVANLDGAHRKVLLWQ-SL----EKPR 162 (349)
T ss_dssp EEEEEETTSCSCEEEECSSCSCC-CEEEEET--TTT--EEEEEETTTT---EEEEEETTSCSCEEEECT-TC----SCEE
T ss_pred ceEEEecCCCCceEEEeCCCCCc-cEEEEec--CCC--eEEEEcCCCC---eEEEEcCCCCceEEEEeC-CC----CCcc
Confidence 8889998876543321 11111 2234332 111 2333333221 455555543322222111 11 2345
Q ss_pred eeEEe--CCeEEEEccC--CeEEEEeCCCCCc
Q 017173 210 KLVFC--NGIFYCLSLT--GWLGVFDPVKRDW 237 (376)
Q Consensus 210 ~~v~~--~G~~Y~l~~~--~~i~~~D~~~~~~ 237 (376)
++++. +|.+||.+.. +.|..+|++...-
T Consensus 163 ~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 194 (349)
T 3v64_C 163 AIALHPMEGTIYWTDWGNTPRIEASSMDGSGR 194 (349)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred eEEEecCcCeEEEeccCCCCEEEEEeCCCCCc
Confidence 56665 7899998753 6899999987543
No 132
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=27.17 E-value=4.7e+02 Score=25.88 Aligned_cols=134 Identities=10% Similarity=0.060 Sum_probs=66.4
Q ss_pred EEEEcCCCCceEEeec--CCCCCCeE---EEecCCeEEEEeCCCCeEEEEcCCCcceecCCCc------ccceeEEEeec
Q 017173 92 YEFYDPAQRKTYSLEL--PELYGSRV---CYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRF------ELTYQIVAFSC 160 (376)
Q Consensus 92 ~~~~~~~~~~~~~~~l--p~~~~~~~---~~s~~G~ll~~~~~~~~~~l~NP~T~~~~~LP~~------~~~~~~~~l~~ 160 (376)
...|++.+++...+.. +.+....+ .-...|-|.+... ..++++||-|+++..+... ..... ..+..
T Consensus 429 l~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~i~~ 505 (795)
T 4a2l_A 429 LSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--SALVRFNPEQRSFTTIEKEKDGTPVVSKQI-TTLFR 505 (795)
T ss_dssp EEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--SCEEEEETTTTEEEECCBCTTCCBCCCCCE-EEEEE
T ss_pred eeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--CceeEEeCCCCeEEEccccccccccCCceE-EEEEE
Confidence 3455666666554432 11222222 2234677776655 3799999999887665432 11111 11222
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeecc---CCCCCccccceeeeEE-eCCeEEEEccCCeEEEEeCCCCC
Q 017173 161 APTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNY---QNRLPFVSSIWNKLVF-CNGIFYCLSLTGWLGVFDPVKRD 236 (376)
Q Consensus 161 ~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~---~~~~p~~~~~~~~~v~-~~G~~Y~l~~~~~i~~~D~~~~~ 236 (376)
++. +. + ++... . .+..|++.++.+ .... ...++ ......+.. -+|.+++-+.. .|..||+.++.
T Consensus 506 d~~-g~-l--Wigt~-~---Gl~~~~~~~~~~-~~~~~~~~~~l~--~~~i~~i~~d~~g~lWigT~~-Gl~~~d~~~~~ 573 (795)
T 4a2l_A 506 DSH-KR-L--WIGGE-E---GLSVFKQEGLDI-QKASILPVSNVT--KLFTNCIYEASNGIIWVGTRE-GFYCFNEKDKQ 573 (795)
T ss_dssp CTT-CC-E--EEEES-S---CEEEEEEETTEE-EECCCSCSCGGG--GSCEEEEEECTTSCEEEEESS-CEEEEETTTTE
T ss_pred CCC-CC-E--EEEeC-C---ceEEEeCCCCeE-EEecCCCCCCCC--CCeeEEEEECCCCCEEEEeCC-CceeECCCCCc
Confidence 211 11 1 22221 1 255667766666 3221 11122 122333222 26787766555 79999998877
Q ss_pred ceee
Q 017173 237 WGVL 240 (376)
Q Consensus 237 ~~~~ 240 (376)
+..+
T Consensus 574 ~~~~ 577 (795)
T 4a2l_A 574 IKRY 577 (795)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6544
No 133
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=26.85 E-value=4.6e+02 Score=25.68 Aligned_cols=190 Identities=13% Similarity=0.097 Sum_probs=89.7
Q ss_pred eEEEEcCCCcce--e---cCCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCC--C-eeeeccCCCCCc
Q 017173 132 RVFFFNPFTRDM--I---KLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGAT--E-WVTDNYQNRLPF 203 (376)
Q Consensus 132 ~~~l~NP~T~~~--~---~LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~--~-W~~~~~~~~~p~ 203 (376)
.+++++.-|+.. . ..+.-+.....+.++ | ++.++++...........+.+++..++ . |+.+.....
T Consensus 244 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~S--p-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~--- 317 (741)
T 1yr2_A 244 TVWLHRLGTPQSADQPVFATPELPKRGHGASVS--S-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK--- 317 (741)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEEC--T-TSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS---
T ss_pred EEEEEECCCCchhCEEEeccCCCCeEEEEEEEC--C-CCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC---
Confidence 477888777652 1 112111112223332 2 345666655432112235667776655 6 776653221
Q ss_pred cccceeeeEEeCCeEEEEccC----CeEEEEeCCC--CCceeeeeCCCCCCcccccccccceeEEEEECCcEEEEEEecC
Q 017173 204 VSSIWNKLVFCNGIFYCLSLT----GWLGVFDPVK--RDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCS 277 (376)
Q Consensus 204 ~~~~~~~~v~~~G~~Y~l~~~----~~i~~~D~~~--~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~ 277 (376)
......-..++.+|+.+.. +.|.++|+++ ..|..+. +. .... -..+.-.++.|++... .+
T Consensus 318 --~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~-~~--~~~~--------l~~~~~~~~~lv~~~~-~d 383 (741)
T 1yr2_A 318 --AQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV-PE--SKDN--------LESVGIAGNRLFASYI-HD 383 (741)
T ss_dssp --SCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE-CC--CSSE--------EEEEEEEBTEEEEEEE-ET
T ss_pred --ceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe-cC--CCCe--------EEEEEEECCEEEEEEE-EC
Confidence 1111122345678888653 4599999987 4565543 21 1111 0111223565554443 44
Q ss_pred CCcEEEEEecCCccEEEeeccCCcEEEeeCCcccccCCCCccccCeEEEccccc-CCceEEEEecCCceeecCC
Q 017173 278 ENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRF-FGKRCISYSLNDSRYYPRK 350 (376)
Q Consensus 278 ~~~~V~~ld~~~~~W~~v~~lg~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~-~~~~~~vy~l~~~~~~~~~ 350 (376)
....||.+|..+..-.++. +++..-..+ ++.. + .++.|+|..... ....++.||+++++...+.
T Consensus 384 g~~~l~~~~~~g~~~~~l~-~~~~~~v~~----~~~s--~--d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~ 448 (741)
T 1yr2_A 384 AKSQVLAFDLDGKPAGAVS-LPGIGSASG----LSGR--P--GDRHAYLSFSSFTQPATVLALDPATAKTTPWE 448 (741)
T ss_dssp TEEEEEEEETTSCEEEECB-CSSSCEEEE----EECC--B--TCSCEEEEEEETTEEEEEEEEETTTTEEEECS
T ss_pred CEEEEEEEeCCCCceeecc-CCCCeEEEE----eecC--C--CCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 5567888876544333332 222111000 1110 1 345666654321 2456778888887765443
No 134
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=26.72 E-value=2.8e+02 Score=23.17 Aligned_cols=176 Identities=11% Similarity=0.090 Sum_probs=77.8
Q ss_pred cEEEEEcCCCCceEE-eecCCCCCCeEEEecCCeEEEEeCCCCeEEEEcCCCcceec-CC-CcccceeEEEeecCCCCCC
Q 017173 90 NLYEFYDPAQRKTYS-LELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIK-LP-RFELTYQIVAFSCAPTSSS 166 (376)
Q Consensus 90 ~~~~~~~~~~~~~~~-~~lp~~~~~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~~-LP-~~~~~~~~~~l~~~p~~~~ 166 (376)
....++|+..++... +....-+-..+..+.+|-+++.......+.++|..+++.+. +. ........+.++ |. +.
T Consensus 129 ~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~ 205 (312)
T 4ery_A 129 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS--PN-GK 205 (312)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEEC--TT-SS
T ss_pred CcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEEC--CC-CC
Confidence 345677776654322 22111011122235556544444444579999998887532 21 111122233443 32 24
Q ss_pred eEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEeCCeEEEE-ccCCeEEEEeCCCCCceeeeeCCC
Q 017173 167 CVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCL-SLTGWLGVFDPVKRDWGVLVVPPP 245 (376)
Q Consensus 167 ~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l-~~~~~i~~~D~~~~~~~~~~~p~p 245 (376)
+++.+- . .+ .+.+|+..++.-...-....-.. .........-+|.+.+. ..++.|.+||+.+...-. .....
T Consensus 206 ~l~~~~-~-d~---~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~-~~~~h 278 (312)
T 4ery_A 206 YILAAT-L-DN---TLKLWDYSKGKCLKTYTGHKNEK-YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ-KLQGH 278 (312)
T ss_dssp EEEEEE-T-TT---EEEEEETTTTEEEEEECSSCCSS-SCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEE-EECCC
T ss_pred EEEEEc-C-CC---eEEEEECCCCcEEEEEEecCCce-EEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhh-hhhcc
Confidence 444332 1 11 56778776553221111100000 00011111124554444 457889999998754211 11110
Q ss_pred CCCcccccccccceeEEEEE--CCcEEEEEEe-cCCCcEEEEEe
Q 017173 246 KCPENFFAKNWWKGKFMVEH--KGDILVIYTC-CSENPIIFKLD 286 (376)
Q Consensus 246 ~~~~~~~~~~~~~~~~Lv~~--~G~LllV~~~-~~~~~~V~~ld 286 (376)
. ....-+.. +|.+++.... .+..+.||+.|
T Consensus 279 ---~--------~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 279 ---T--------DVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp ---S--------SCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred ---C--------CcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 0 11222332 3666665553 35668899876
No 135
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=26.46 E-value=2.8e+02 Score=23.07 Aligned_cols=221 Identities=11% Similarity=-0.033 Sum_probs=101.4
Q ss_pred cEEEEEcCCCCceEEeecCCCCCCeEEEecCCeEEEEeCCCCeEEEEcCCCcceecCCCccc-----ceeEEEeecCCCC
Q 017173 90 NLYEFYDPAQRKTYSLELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFEL-----TYQIVAFSCAPTS 164 (376)
Q Consensus 90 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~~LP~~~~-----~~~~~~l~~~p~~ 164 (376)
.....+++.++ ...+..+.-....+..+.+|-|++.......+.++||-|++...+..... ....++++ +.
T Consensus 50 ~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d--~~- 125 (296)
T 3e5z_A 50 NRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLA--PD- 125 (296)
T ss_dssp TEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEEC--TT-
T ss_pred CEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEEC--CC-
Confidence 34556677766 44444432111223335677777766544589999999998655422111 01123332 22
Q ss_pred CCeEEEEE--ec----------cCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEe-CCeEEEEcc-CCeEEEE
Q 017173 165 SSCVVFTV--KH----------ISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NGIFYCLSL-TGWLGVF 230 (376)
Q Consensus 165 ~~~~v~~i--~~----------~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G~~Y~l~~-~~~i~~~ 230 (376)
+...+... .. .......+..+++. +.-+...... .....+++- +|.+++... .+.|.+|
T Consensus 126 G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~------~~~~gi~~s~dg~~lv~~~~~~~i~~~ 198 (296)
T 3e5z_A 126 GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR------VKPNGLAFLPSGNLLVSDTGDNATHRY 198 (296)
T ss_dssp SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC------SSEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred CCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC------CCCccEEECCCCCEEEEeCCCCeEEEE
Confidence 22211100 00 00001144455554 4433332211 112233332 677664433 5789999
Q ss_pred eCC-CCCc-eeee-eCC-CCCCcccccccccceeEEEEECCcEEEEEEecCCCcEEEEEecCCccEEEeeccCCcEEEee
Q 017173 231 DPV-KRDW-GVLV-VPP-PKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMKTLDGLTLFAS 306 (376)
Q Consensus 231 D~~-~~~~-~~~~-~p~-p~~~~~~~~~~~~~~~~Lv~~~G~LllV~~~~~~~~~V~~ld~~~~~W~~v~~lg~~~lFlg 306 (376)
|+. .+.. .... ... ...|. ...+..+|.|++.. .. .|+++|.+......+ .++.. +
T Consensus 199 ~~~~~g~~~~~~~~~~~~~~~p~----------~i~~d~~G~l~v~~---~~--~v~~~~~~g~~~~~~-~~~~~---~- 258 (296)
T 3e5z_A 199 CLNARGETEYQGVHFTVEPGKTD----------GLRVDAGGLIWASA---GD--GVHVLTPDGDELGRV-LTPQT---T- 258 (296)
T ss_dssp EECSSSCEEEEEEEECCSSSCCC----------SEEEBTTSCEEEEE---TT--EEEEECTTSCEEEEE-ECSSC---C-
T ss_pred EECCCCcCcCCCeEeeCCCCCCC----------eEEECCCCCEEEEc---CC--eEEEECCCCCEEEEE-ECCCC---c-
Confidence 987 3333 1111 111 11111 12344568877666 23 455567664332222 22221 0
Q ss_pred CCcccccCCCCccccCeEEEcccccCCceEEEEecCCceeecCC
Q 017173 307 FLSSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRYYPRK 350 (376)
Q Consensus 307 ~~~s~~~~~~~g~~~n~Iyf~~~~~~~~~~~vy~l~~~~~~~~~ 350 (376)
....+. +-.++.+|+... +.++.|++++++++..+
T Consensus 259 ~~~~f~-----~~d~~~L~v~t~----~~l~~~~~~~~~~~~~~ 293 (296)
T 3e5z_A 259 SNLCFG-----GPEGRTLYMTVS----TEFWSIETNVRGLEHHH 293 (296)
T ss_dssp CEEEEE-----STTSCEEEEEET----TEEEEEECSCCBCCC--
T ss_pred eeEEEE-----CCCCCEEEEEcC----CeEEEEEcccccccccc
Confidence 000110 113567888763 35778999998887654
No 136
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=26.29 E-value=2.9e+02 Score=23.26 Aligned_cols=36 Identities=3% Similarity=-0.056 Sum_probs=25.5
Q ss_pred cceeeeEEe--CCeEEEEcc-CCeEEEEeCCCCCceeee
Q 017173 206 SIWNKLVFC--NGIFYCLSL-TGWLGVFDPVKRDWGVLV 241 (376)
Q Consensus 206 ~~~~~~v~~--~G~~Y~l~~-~~~i~~~D~~~~~~~~~~ 241 (376)
...+.+++. ++.+|++.. .+.|+.+|++.+..+.+.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~ 65 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIP 65 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEe
Confidence 456777777 578998654 678999999855454443
No 137
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=26.05 E-value=2.1e+02 Score=25.77 Aligned_cols=22 Identities=9% Similarity=0.410 Sum_probs=20.4
Q ss_pred CCeEEEEccCCeEEEEeCCCCC
Q 017173 215 NGIFYCLSLTGWLGVFDPVKRD 236 (376)
Q Consensus 215 ~G~~Y~l~~~~~i~~~D~~~~~ 236 (376)
.|.+|.++..|.|..||+++..
T Consensus 271 ygviyviTK~G~ihlyDleTgt 292 (365)
T 2xzh_A 271 HDVVFLITKYGYIHLYDLETGT 292 (365)
T ss_dssp TTEEEEEETTSEEEEEETTTCC
T ss_pred CCEEEEEeCCcEEEEEEcccCc
Confidence 5899999999999999999875
No 138
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=25.84 E-value=3.6e+02 Score=24.17 Aligned_cols=33 Identities=18% Similarity=0.080 Sum_probs=23.0
Q ss_pred eeeeEEe--CCeEEEEcc-CCeEEEEeCCCCCceee
Q 017173 208 WNKLVFC--NGIFYCLSL-TGWLGVFDPVKRDWGVL 240 (376)
Q Consensus 208 ~~~~v~~--~G~~Y~l~~-~~~i~~~D~~~~~~~~~ 240 (376)
...+++- +|.+||.+. .+.|.++|++......+
T Consensus 161 p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l 196 (400)
T 3p5b_L 161 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL 196 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEE
T ss_pred cccEEEEecCCceEEEECCCCeEEEEeCCCCceEEE
Confidence 3444443 789999876 57899999987654433
No 139
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=25.78 E-value=3e+02 Score=23.13 Aligned_cols=8 Identities=38% Similarity=0.584 Sum_probs=3.6
Q ss_pred CCeEEEEc
Q 017173 215 NGIFYCLS 222 (376)
Q Consensus 215 ~G~~Y~l~ 222 (376)
+|.+|+.+
T Consensus 223 ~G~i~v~~ 230 (276)
T 3no2_A 223 NGGLYICN 230 (276)
T ss_dssp TSCEEEEE
T ss_pred CCCEEEEe
Confidence 44444443
No 140
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=25.14 E-value=4.5e+02 Score=25.05 Aligned_cols=201 Identities=6% Similarity=-0.024 Sum_probs=94.7
Q ss_pred CCeEEEEeCCCCeEEEEcCCCccee-cCCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccC
Q 017173 120 DSWLLLYRPRTHRVFFFNPFTRDMI-KLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQ 198 (376)
Q Consensus 120 ~G~ll~~~~~~~~~~l~NP~T~~~~-~LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~ 198 (376)
++.+++.....+.+.++|+.|++.+ .+|.-.. ...++++.+ +.++.++ +. .+ .+.++|..+..-+.+..
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~-p~~v~~SpD---Gr~lyv~-~~-dg---~V~viD~~~~t~~~v~~- 235 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA-VHISRLSAS---GRYLFVI-GR-DG---KVNMIDLWMKEPTTVAE- 235 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSSC-EEEEEECTT---SCEEEEE-ET-TS---EEEEEETTSSSCCEEEE-
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCCC-ccceEECCC---CCEEEEE-cC-CC---eEEEEECCCCCCcEeEE-
Confidence 4567777666678999999999765 3332211 123555432 3443332 32 21 56778864111122221
Q ss_pred CCCCccccceeeeEEe-----CCe-EEEEcc-CCeEEEEeCCCCCc-eeeeeCC-CCCCcccccccccceeEEEEEC-Cc
Q 017173 199 NRLPFVSSIWNKLVFC-----NGI-FYCLSL-TGWLGVFDPVKRDW-GVLVVPP-PKCPENFFAKNWWKGKFMVEHK-GD 268 (376)
Q Consensus 199 ~~~p~~~~~~~~~v~~-----~G~-~Y~l~~-~~~i~~~D~~~~~~-~~~~~p~-p~~~~~~~~~~~~~~~~Lv~~~-G~ 268 (376)
++. ......+++- +|+ +|+.+. .+.+.++|..+... ..+.... +.....+... ..-..++.+. +.
T Consensus 236 --i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~--~rva~i~~s~~~~ 310 (567)
T 1qks_A 236 --IKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPE--PRVAAILASHYRP 310 (567)
T ss_dssp --EEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESC--CCEEEEEECSSSS
T ss_pred --Eec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCC--CceEEEEEcCCCC
Confidence 110 0223455665 675 666655 57899999776432 2222111 0000000000 0112334443 45
Q ss_pred EEEEEEecCCCcEEEEEecCCccEEEeeccCCcEEEeeCCcccccCCCCccccCeEEEcccccCCceEEEEecCCceee
Q 017173 269 ILVIYTCCSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRYY 347 (376)
Q Consensus 269 LllV~~~~~~~~~V~~ld~~~~~W~~v~~lg~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~~~~~~~vy~l~~~~~~ 347 (376)
.+++.. .+.-.|+.+|....+..++..++... |+-. ..+. -.+..+|.... ..+++.++|++++++.
T Consensus 311 ~~vv~~--~~~g~v~~vd~~~~~~~~v~~i~~~~-~~~d-~~~~------pdgr~~~va~~--~sn~V~ViD~~t~kl~ 377 (567)
T 1qks_A 311 EFIVNV--KETGKILLVDYTDLNNLKTTEISAER-FLHD-GGLD------GSHRYFITAAN--ARNKLVVIDTKEGKLV 377 (567)
T ss_dssp EEEEEE--TTTTEEEEEETTCSSEEEEEEEECCS-SEEE-EEEC------TTSCEEEEEEG--GGTEEEEEETTTTEEE
T ss_pred EEEEEe--cCCCeEEEEecCCCccceeeeeeccc-cccC-ceEC------CCCCEEEEEeC--CCCeEEEEECCCCcEE
Confidence 555554 33345666776665555555442110 0000 0000 02445555554 3566778888887644
No 141
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=24.98 E-value=3.7e+02 Score=23.99 Aligned_cols=96 Identities=6% Similarity=-0.016 Sum_probs=44.9
Q ss_pred CCeEEEEcCCCcceec-CCCccc--ceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCcccc
Q 017173 130 THRVFFFNPFTRDMIK-LPRFEL--TYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSS 206 (376)
Q Consensus 130 ~~~~~l~NP~T~~~~~-LP~~~~--~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~ 206 (376)
.+.+.|||.-++.... +..... ....+.+ .|..+.+++-+- ..+ .+.+|+..++.-.......... .
T Consensus 141 dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f--~p~~~~~l~s~s--~D~---~v~iwd~~~~~~~~~~~~~~~~---~ 210 (435)
T 4e54_B 141 GGDIMLWNFGIKDKPTFIKGIGAGGSITGLKF--NPLNTNQFYASS--MEG---TTRLQDFKGNILRVFASSDTIN---I 210 (435)
T ss_dssp TSCEEEECSSCCSCCEEECCCSSSCCCCEEEE--CSSCTTEEEEEC--SSS---CEEEEETTSCEEEEEECCSSCS---C
T ss_pred CCEEEEEECCCCCceeEEEccCCCCCEEEEEE--eCCCCCEEEEEe--CCC---EEEEeeccCCceeEEeccCCCC---c
Confidence 3478888888776432 221111 1223343 444444433221 111 3556776555433322211111 1
Q ss_pred ceeeeEEe-CCeEEE-EccCCeEEEEeCCCC
Q 017173 207 IWNKLVFC-NGIFYC-LSLTGWLGVFDPVKR 235 (376)
Q Consensus 207 ~~~~~v~~-~G~~Y~-l~~~~~i~~~D~~~~ 235 (376)
....+.+. +|.+.+ -+.++.|..||+.+.
T Consensus 211 ~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~ 241 (435)
T 4e54_B 211 WFCSLDVSASSRMVVTGDNVGNVILLNMDGK 241 (435)
T ss_dssp CCCCEEEETTTTEEEEECSSSBEEEEESSSC
T ss_pred cEEEEEECCCCCEEEEEeCCCcEeeeccCcc
Confidence 12222222 555444 456788999998764
No 142
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=23.88 E-value=3.4e+02 Score=23.11 Aligned_cols=109 Identities=13% Similarity=0.087 Sum_probs=55.3
Q ss_pred EecCCeEEEEeCCCCeEEEEcCCCcc---eecCCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCee
Q 017173 117 YTKDSWLLLYRPRTHRVFFFNPFTRD---MIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWV 193 (376)
Q Consensus 117 ~s~~G~ll~~~~~~~~~~l~NP~T~~---~~~LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~ 193 (376)
.+.+|-+++.....+.+.++|.-+++ ...+.........+.++. ++.+++.+- . .+ .+.+|+..++.+.
T Consensus 16 ~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~l~~~~-~-dg---~i~vwd~~~~~~~ 87 (372)
T 1k8k_C 16 WNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP---DSNRIVTCG-T-DR---NAYVWTLKGRTWK 87 (372)
T ss_dssp ECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEET---TTTEEEEEE-T-TS---CEEEEEEETTEEE
T ss_pred ECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeC---CCCEEEEEc-C-CC---eEEEEECCCCeee
Confidence 34455444444344578999988875 223332222233444443 234444332 1 11 4567777666655
Q ss_pred eeccCCCCCccccceeeeEEe-CCe-EEEEccCCeEEEEeCCCCC
Q 017173 194 TDNYQNRLPFVSSIWNKLVFC-NGI-FYCLSLTGWLGVFDPVKRD 236 (376)
Q Consensus 194 ~~~~~~~~p~~~~~~~~~v~~-~G~-~Y~l~~~~~i~~~D~~~~~ 236 (376)
........ ......+.+. +|. ++....++.|.+||+....
T Consensus 88 ~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 88 PTLVILRI---NRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp EEEECCCC---SSCEEEEEECTTSSEEEEEETTSSEEEEEEETTT
T ss_pred eeEEeecC---CCceeEEEECCCCCEEEEEeCCCEEEEEEecCCC
Confidence 33221111 1234444443 454 4455567889999988754
No 143
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=23.79 E-value=4.8e+02 Score=24.81 Aligned_cols=157 Identities=11% Similarity=-0.008 Sum_probs=77.9
Q ss_pred CCe-EEEEeCCCCeEEEEcCC--C-cceecCCCcc-----cceeEEEeecCCCCCCeEEEEEeccC-----CCeEEEEEE
Q 017173 120 DSW-LLLYRPRTHRVFFFNPF--T-RDMIKLPRFE-----LTYQIVAFSCAPTSSSCVVFTVKHIS-----PTVVAISTC 185 (376)
Q Consensus 120 ~G~-ll~~~~~~~~~~l~NP~--T-~~~~~LP~~~-----~~~~~~~l~~~p~~~~~~v~~i~~~~-----~~~~~~~~y 185 (376)
+.. |+........++++|.- + +....|...+ .....++++.+ +..+++...... .....+..+
T Consensus 90 g~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spD---g~~l~~~~~~~~~~~~~~~~~~i~~~ 166 (662)
T 3azo_A 90 GGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPE---RGEVWCMAEEFTGEGPSDVRRFLAAV 166 (662)
T ss_dssp SSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETT---TTEEEEEEEEECSSSTTCEEEEEEEE
T ss_pred CCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCC---CCEEEEEEecccCCCCCCceeEEEEE
Confidence 445 55554434579999987 4 6666665432 22234455432 344444432210 122467777
Q ss_pred ecCC------CCeeeec-cCCCCCccccceeeeEE-eCCe-EEEEccC--------CeEEEEeCC-CCC---ceeeeeCC
Q 017173 186 HPGA------TEWVTDN-YQNRLPFVSSIWNKLVF-CNGI-FYCLSLT--------GWLGVFDPV-KRD---WGVLVVPP 244 (376)
Q Consensus 186 ~~~~------~~W~~~~-~~~~~p~~~~~~~~~v~-~~G~-~Y~l~~~--------~~i~~~D~~-~~~---~~~~~~p~ 244 (376)
+..+ +.-+.+. ... .....+.+ -||+ +++...+ ..|.++|++ ++. ...+....
T Consensus 167 ~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~ 240 (662)
T 3azo_A 167 PLDGSAAADRSAVRELSDDAH------RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP 240 (662)
T ss_dssp ETTSTTTTCGGGSEESSCSCS------SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET
T ss_pred ECCCCccccCCceeEEEecCC------CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC
Confidence 7766 4444333 211 11222222 2664 5544422 368999988 452 22221100
Q ss_pred CCCCcccccccccceeEEE-EECCcEEEEEEecCCCcEEEEEecCCccEEEeec
Q 017173 245 PKCPENFFAKNWWKGKFMV-EHKGDILVIYTCCSENPIIFKLDQSKMAWEEMKT 297 (376)
Q Consensus 245 p~~~~~~~~~~~~~~~~Lv-~~~G~LllV~~~~~~~~~V~~ld~~~~~W~~v~~ 297 (376)
.. ....+. .-+|+++ +....+....||.+|.++.+++.+..
T Consensus 241 ---~~--------~~~~~~~spdg~l~-~~~~~~~~~~l~~~~~~~~~~~~l~~ 282 (662)
T 3azo_A 241 ---EE--------AIAQAEWAPDGSLI-VATDRTGWWNLHRVDPATGAATQLCR 282 (662)
T ss_dssp ---TB--------CEEEEEECTTSCEE-EEECTTSSCEEEEECTTTCCEEESSC
T ss_pred ---Cc--------eEcceEECCCCeEE-EEECCCCCeEEEEEECCCCceeeccc
Confidence 00 111222 2368844 33334456789999988888877654
No 144
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=23.75 E-value=3.2e+02 Score=22.76 Aligned_cols=133 Identities=12% Similarity=0.051 Sum_probs=62.9
Q ss_pred EEEEEcCCCCceEE-eecCCCCCCeEEEecCCeEEEEeCCCCeEEEEcCCCcceecCCCcccceeEEEeecCCCCCCeEE
Q 017173 91 LYEFYDPAQRKTYS-LELPELYGSRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSCVV 169 (376)
Q Consensus 91 ~~~~~~~~~~~~~~-~~lp~~~~~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~l~~~p~~~~~~v 169 (376)
...++|....+... +....-.-..+..+.+|-.++.......+.++|.-+++.+..-........+.++ |. +.+++
T Consensus 164 ~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s--~~-~~~l~ 240 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYC--PT-GEWLA 240 (337)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEC--TT-SSEEE
T ss_pred cEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEEC--CC-CCEEE
Confidence 45566666554332 2111101112223445543433333457999999888754321222222234443 32 23443
Q ss_pred EEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEe-CCe-EEEEccCCeEEEEeCCCCCc
Q 017173 170 FTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NGI-FYCLSLTGWLGVFDPVKRDW 237 (376)
Q Consensus 170 ~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G~-~Y~l~~~~~i~~~D~~~~~~ 237 (376)
++. ..+ .+.+|+..++.=...... ......+.+. +|. +.....++.|.+||+.+...
T Consensus 241 ~~~--~~~---~i~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 241 VGM--ESS---NVEVLHVNKPDKYQLHLH------ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS 299 (337)
T ss_dssp EEE--TTS---CEEEEETTSSCEEEECCC------SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred EEc--CCC---cEEEEECCCCCeEEEcCC------ccceeEEEECCCCCEEEEecCCCcEEEEECCCCeE
Confidence 332 121 466777765432211111 1234444444 454 44455678899999987643
No 145
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=23.62 E-value=3.7e+02 Score=23.55 Aligned_cols=189 Identities=5% Similarity=-0.030 Sum_probs=81.7
Q ss_pred CCeEEEEeCCCCeEEEEcCCCcce--ecCCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCeeeecc
Q 017173 120 DSWLLLYRPRTHRVFFFNPFTRDM--IKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEWVTDNY 197 (376)
Q Consensus 120 ~G~ll~~~~~~~~~~l~NP~T~~~--~~LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~ 197 (376)
+..|+... ..+.+.++|.-+... ..+.........+.+ .| ++.+.+.+-. .+ .+.+|+..++.=...-.
T Consensus 186 ~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~--~~-~~~~l~s~~~--d~---~v~iwd~~~~~~~~~~~ 256 (401)
T 4aez_A 186 RHVLSSGS-RSGAIHHHDVRIANHQIGTLQGHSSEVCGLAW--RS-DGLQLASGGN--DN---VVQIWDARSSIPKFTKT 256 (401)
T ss_dssp TTEEEEEE-TTSEEEEEETTSSSCEEEEEECCSSCEEEEEE--CT-TSSEEEEEET--TS---CEEEEETTCSSEEEEEC
T ss_pred CCEEEEEc-CCCCEEEEecccCcceeeEEcCCCCCeeEEEE--cC-CCCEEEEEeC--CC---eEEEccCCCCCccEEec
Confidence 33444333 344788888875432 112111112222333 33 2344333321 11 46677776543221111
Q ss_pred CCCCCccccceeeeEEeC-C-eEEEEc---cCCeEEEEeCCCCCce-eeeeCCCCCCcccccccccceeEEEEECCcEEE
Q 017173 198 QNRLPFVSSIWNKLVFCN-G-IFYCLS---LTGWLGVFDPVKRDWG-VLVVPPPKCPENFFAKNWWKGKFMVEHKGDILV 271 (376)
Q Consensus 198 ~~~~p~~~~~~~~~v~~~-G-~~Y~l~---~~~~i~~~D~~~~~~~-~~~~p~p~~~~~~~~~~~~~~~~Lv~~~G~Lll 271 (376)
. . ......+.+.. | .+.+.+ .++.|.+||+.+.... .+.. ... ........+|..++
T Consensus 257 ~--~---~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~-----~~~-------v~~~~~s~~~~~l~ 319 (401)
T 4aez_A 257 N--H---NAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA-----GSQ-------VTSLIWSPHSKEIM 319 (401)
T ss_dssp C--C---SSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC-----SSC-------EEEEEECSSSSEEE
T ss_pred C--C---cceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC-----CCc-------EEEEEECCCCCeEE
Confidence 1 0 12344455553 3 455544 4788999999876431 2211 010 00111222466665
Q ss_pred EEEe-cCCCcEEEEEecCCccEEEeeccCCcEEEeeCCcccccCCCCccccCeEEEcccccCCceEEEEecCCcee
Q 017173 272 IYTC-CSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRY 346 (376)
Q Consensus 272 V~~~-~~~~~~V~~ld~~~~~W~~v~~lg~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~~~~~~~vy~l~~~~~ 346 (376)
+... .++.+.||.+.. .....+..+.++. +.-.++... + .++.|+... .++.+.+|++.+++.
T Consensus 320 ~~~g~~dg~i~v~~~~~--~~~~~~~~~~~h~---~~v~~~~~s--~--dg~~l~s~~---~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 320 STHGFPDNNLSIWSYSS--SGLTKQVDIPAHD---TRVLYSALS--P--DGRILSTAA---SDENLKFWRVYDGDH 383 (401)
T ss_dssp EEECTTTCEEEEEEEET--TEEEEEEEEECCS---SCCCEEEEC--T--TSSEEEEEC---TTSEEEEEECCC---
T ss_pred EEeecCCCcEEEEecCC--ccceeEEEecCCC---CCEEEEEEC--C--CCCEEEEEe---CCCcEEEEECCCCcc
Confidence 5542 456678887643 3344443332110 000011110 1 244454444 356778999988753
No 146
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=23.20 E-value=3.1e+02 Score=22.45 Aligned_cols=135 Identities=7% Similarity=0.035 Sum_probs=68.4
Q ss_pred cEEEEEcCCCCceEEeecCCCCC--CeEEEecCCeEEEEeCCCCeEEEEcCCCcceec--CCCcccceeEEEeecCCCCC
Q 017173 90 NLYEFYDPAQRKTYSLELPELYG--SRVCYTKDSWLLLYRPRTHRVFFFNPFTRDMIK--LPRFELTYQIVAFSCAPTSS 165 (376)
Q Consensus 90 ~~~~~~~~~~~~~~~~~lp~~~~--~~~~~s~~G~ll~~~~~~~~~~l~NP~T~~~~~--LP~~~~~~~~~~l~~~p~~~ 165 (376)
.....||+. ++...+.+|.... ..+....+|-+++.......++.+||- ++... +|........+++ ++..
T Consensus 83 ~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~--d~~g- 157 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITL--GSDN- 157 (300)
T ss_dssp TEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEE--CTTS-
T ss_pred CeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEE--CCCC-
Confidence 345567777 5555555553111 122224577777776544579999997 65443 3422111222333 3322
Q ss_pred CeEEEEEeccCCCeEEEEEEecCCCCeeeeccCCCCCccccceeeeEEe-CCeEEEEcc-CCeEEEEeCCCCCceee
Q 017173 166 SCVVFTVKHISPTVVAISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFC-NGIFYCLSL-TGWLGVFDPVKRDWGVL 240 (376)
Q Consensus 166 ~~~v~~i~~~~~~~~~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~-~G~~Y~l~~-~~~i~~~D~~~~~~~~~ 240 (376)
. ++...... . .+..++. ++.......+... .....+++- +|.+|+.+. .+.|..||+ ++.+...
T Consensus 158 ~--l~v~~~~~-~--~i~~~~~-~g~~~~~~~~~~~----~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~ 223 (300)
T 2qc5_A 158 A--LWFTENQN-N--SIGRITN-TGKLEEYPLPTNA----AAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEY 223 (300)
T ss_dssp S--EEEEETTT-T--EEEEECT-TCCEEEEECSSTT----CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEE
T ss_pred C--EEEEecCC-C--eEEEECC-CCcEEEeeCCCCC----CCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEE
Confidence 2 22222211 1 4566776 6666554322111 223344443 688998775 457999999 4444333
No 147
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=22.38 E-value=5.4e+02 Score=24.93 Aligned_cols=184 Identities=13% Similarity=0.084 Sum_probs=85.2
Q ss_pred eEEEEcCCCccee-----cCCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCC------C--CeeeeccC
Q 017173 132 RVFFFNPFTRDMI-----KLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGA------T--EWVTDNYQ 198 (376)
Q Consensus 132 ~~~l~NP~T~~~~-----~LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~------~--~W~~~~~~ 198 (376)
.+++++.-|+... ..+..+.....+.++ | ++.++++...........+.+++..+ + .++.+...
T Consensus 209 ~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~S--p-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~ 285 (710)
T 2xdw_A 209 KLYYHVLGTDQSEDILCAEFPDEPKWMGGAELS--D-DGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN 285 (710)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEEC--T-TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS
T ss_pred EEEEEECCCCcccceEEeccCCCCeEEEEEEEc--C-CCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC
Confidence 3888888887631 112111112233343 2 24566665542211123566777654 3 57665532
Q ss_pred CCCCccccceeeeEE-eCCeEEEEccC----CeEEEEeCCCC---CceeeeeCCCCCCcccccccccceeEEEEE-CCcE
Q 017173 199 NRLPFVSSIWNKLVF-CNGIFYCLSLT----GWLGVFDPVKR---DWGVLVVPPPKCPENFFAKNWWKGKFMVEH-KGDI 269 (376)
Q Consensus 199 ~~~p~~~~~~~~~v~-~~G~~Y~l~~~----~~i~~~D~~~~---~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~-~G~L 269 (376)
.. .....+. -++.+|+.+.. ..|.++|+.+. .|+.+.... +.. .-..+.-. +|.|
T Consensus 286 ~~------~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~---~~~-------~~~~~~~~~~~~l 349 (710)
T 2xdw_A 286 FE------GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH---EKD-------VLEWVACVRSNFL 349 (710)
T ss_dssp SS------SCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC---SSC-------EEEEEEEETTTEE
T ss_pred CC------cEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC---CCC-------eEEEEEEEcCCEE
Confidence 11 1112233 34578888653 36999999865 355443211 110 00112223 4555
Q ss_pred EEEEEecCCCcEEEEEecCCcc-EEEeeccCCcEEEeeCCcccccCCCCccccCeEEEccccc-CCceEEEEecCCce
Q 017173 270 LVIYTCCSENPIIFKLDQSKMA-WEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRF-FGKRCISYSLNDSR 345 (376)
Q Consensus 270 llV~~~~~~~~~V~~ld~~~~~-W~~v~~lg~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~-~~~~~~vy~l~~~~ 345 (376)
++... ......||.+|...++ ..++. ++...+. +++.. + .++.|+|...+. ....++.||+++++
T Consensus 350 v~~~~-~~g~~~l~~~~~~~g~~~~~l~-~~~~~v~-----~~~~s--~--d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 350 VLCYL-HDVKNTLQLHDLATGALLKIFP-LEVGSVV-----GYSGQ--K--KDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEE-ETTEEEEEEEETTTCCEEEEEC-CCSSEEE-----EEECC--T--TCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEE-ECCEEEEEEEECCCCCEEEecC-CCCceEE-----EEecC--C--CCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 44433 4445567777864333 33332 2211110 01111 1 345666653321 34566778877765
No 148
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=22.28 E-value=3.8e+02 Score=23.11 Aligned_cols=29 Identities=21% Similarity=0.180 Sum_probs=20.5
Q ss_pred eeeeEEe-CCeEEEEcc------CCeEEEEeCCCCC
Q 017173 208 WNKLVFC-NGIFYCLSL------TGWLGVFDPVKRD 236 (376)
Q Consensus 208 ~~~~v~~-~G~~Y~l~~------~~~i~~~D~~~~~ 236 (376)
...+++- +|.+|+++. ...|++||+.++.
T Consensus 69 p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~ 104 (343)
T 2qe8_A 69 VLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQ 104 (343)
T ss_dssp EEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTE
T ss_pred eeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCe
Confidence 3444443 589999874 3689999998765
No 149
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=21.83 E-value=5.6e+02 Score=24.94 Aligned_cols=199 Identities=9% Similarity=-0.030 Sum_probs=0.0
Q ss_pred eEEEecCCeEEEEeCCCCeEEEEcCCCcc-eecCCCcccceeEEEeecCCCCCCeEEEEEeccCCCeEEEEEEecCCCCe
Q 017173 114 RVCYTKDSWLLLYRPRTHRVFFFNPFTRD-MIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHISPTVVAISTCHPGATEW 192 (376)
Q Consensus 114 ~~~~s~~G~ll~~~~~~~~~~l~NP~T~~-~~~LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y~~~~~~W 192 (376)
.+.-+.+|-++......+.+.|+|.-|+. ...+.........+.++.+ +.+++.+-... .+.+|+..++..
T Consensus 18 ~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg-----~i~vw~~~~~~~ 89 (814)
T 3mkq_A 18 GIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIAR---KNWIIVGSDDF-----RIRVFNYNTGEK 89 (814)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGG---GTEEEEEETTS-----EEEEEETTTCCE
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCC---CCEEEEEeCCC-----eEEEEECCCCcE
Q ss_pred eeeccCCCCCccccceeeeEEe--CCeEEEEccCCeEEEEeCCCCCceeeeeCCCCCCcccccccccceeEEEEEC-CcE
Q 017173 193 VTDNYQNRLPFVSSIWNKLVFC--NGIFYCLSLTGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHK-GDI 269 (376)
Q Consensus 193 ~~~~~~~~~p~~~~~~~~~v~~--~G~~Y~l~~~~~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~Lv~~~-G~L 269 (376)
...-... ......+.+. +..+.....++.|.+||+.++.-..........+-. .+.-+. +.-
T Consensus 90 ~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~----------~~~~~p~~~~ 154 (814)
T 3mkq_A 90 VVDFEAH-----PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVM----------CVAFNPKDPS 154 (814)
T ss_dssp EEEEECC-----SSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEE----------EEEEETTEEE
T ss_pred EEEEecC-----CCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEE----------EEEEEcCCCC
Q ss_pred EEEEEecCCCcEEEEEecCCccEEEeeccCCcEEEeeCCcccccCCCCccccCeEEEcccccCCceEEEEecCCcee
Q 017173 270 LVIYTCCSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRY 346 (376)
Q Consensus 270 llV~~~~~~~~~V~~ld~~~~~W~~v~~lg~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~~~~~~~vy~l~~~~~ 346 (376)
+++....++.+.||.++...........-......+... +.-.++.++.... ++.+.+|++.+++.
T Consensus 155 ~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~--------~~~~~~~l~~~~~---dg~i~~~d~~~~~~ 220 (814)
T 3mkq_A 155 TFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYY--------PLPDKPYMITASD---DLTIKIWDYQTKSC 220 (814)
T ss_dssp EEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEEC--------CSTTCCEEEEECT---TSEEEEEETTTTEE
T ss_pred EEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEE--------ECCCCCEEEEEeC---CCEEEEEECCCCcE
No 150
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=21.39 E-value=5.7e+02 Score=24.81 Aligned_cols=201 Identities=8% Similarity=0.045 Sum_probs=0.0
Q ss_pred ecCCeEEE-----EeCCCCeEEEEcCCCcceecCCCcccceeEEEeecCCCCCCeEEEEEeccC--------CCeEEEEE
Q 017173 118 TKDSWLLL-----YRPRTHRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTSSSCVVFTVKHIS--------PTVVAIST 184 (376)
Q Consensus 118 s~~G~ll~-----~~~~~~~~~l~NP~T~~~~~LP~~~~~~~~~~l~~~p~~~~~~v~~i~~~~--------~~~~~~~~ 184 (376)
|.+|-.+. .......++++|..||+.+...........++++ + ++.+++...... .....+..
T Consensus 137 SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-D---g~~l~y~~~~~~~~~~~~~~~~~~~v~~ 212 (693)
T 3iuj_A 137 SRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-G---NEGFFYSSYDKPDGSELSARTDQHKVYF 212 (693)
T ss_dssp CTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-T---TTEEEEEESSCCC-------CCCCEEEE
T ss_pred CCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-C---CCEEEEEEecCcccccccccCCCcEEEE
Q ss_pred EecCCCCe--eeeccCCC-CCccccceeeeEEeCCeEEEEccC-----CeEEEEeCCCC--CceeeeeCCCCCCcccccc
Q 017173 185 CHPGATEW--VTDNYQNR-LPFVSSIWNKLVFCNGIFYCLSLT-----GWLGVFDPVKR--DWGVLVVPPPKCPENFFAK 254 (376)
Q Consensus 185 y~~~~~~W--~~~~~~~~-~p~~~~~~~~~v~~~G~~Y~l~~~-----~~i~~~D~~~~--~~~~~~~p~p~~~~~~~~~ 254 (376)
++.+++.= +.+-..+. .+ .....-...-+|+.-++... ..|..+|+++. .+..+..+...
T Consensus 213 ~~lgt~~~~~~~v~~~~~~~~--~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~-------- 282 (693)
T 3iuj_A 213 HRLGTAQEDDRLVFGAIPAQH--HRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA-------- 282 (693)
T ss_dssp EETTSCGGGCEEEESCSGGGC--CSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS--------
T ss_pred EECCCCcccceEEEecCCCCC--eEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc--------
Q ss_pred cccceeEEEEECCcEEEEEEecCCCcEEEEEecCC---ccEEEeeccCCcEEEeeCCcccccCCCCccccCeEEEccccc
Q 017173 255 NWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSK---MAWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRF 331 (376)
Q Consensus 255 ~~~~~~~Lv~~~G~LllV~~~~~~~~~V~~ld~~~---~~W~~v~~lg~~~lFlg~~~s~~~~~~~g~~~n~Iyf~~~~~ 331 (376)
....+-..++.|+++.........|+.+|.++ ..|+.+..-.+..+ +. ...++.|++.....
T Consensus 283 ---~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~----------s~~g~~lv~~~~~~ 347 (693)
T 3iuj_A 283 ---DVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TV----------HSGSGYLFAEYMVD 347 (693)
T ss_dssp ---CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EE----------EEETTEEEEEEEET
T ss_pred ---eEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EE----------EEECCEEEEEEEEC
Q ss_pred CCceEEEEecCCceee
Q 017173 332 FGKRCISYSLNDSRYY 347 (376)
Q Consensus 332 ~~~~~~vy~l~~~~~~ 347 (376)
....+.+++++.+...
T Consensus 348 g~~~l~~~d~~g~~~~ 363 (693)
T 3iuj_A 348 ATARVEQFDYEGKRVR 363 (693)
T ss_dssp TEEEEEEECTTSCEEE
T ss_pred CeeEEEEEECCCCeeE
No 151
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=20.94 E-value=3.5e+02 Score=25.76 Aligned_cols=108 Identities=9% Similarity=0.146 Sum_probs=55.2
Q ss_pred cCCeEEEEeCCCCeEEEEcC-CCccee---cCCCcccce---------eEEEeecCCCCCCeEEEEEeccCCCeEEEEEE
Q 017173 119 KDSWLLLYRPRTHRVFFFNP-FTRDMI---KLPRFELTY---------QIVAFSCAPTSSSCVVFTVKHISPTVVAISTC 185 (376)
Q Consensus 119 ~~G~ll~~~~~~~~~~l~NP-~T~~~~---~LP~~~~~~---------~~~~l~~~p~~~~~~v~~i~~~~~~~~~~~~y 185 (376)
.+|.+++.....+.++-+|+ .||+.+ .++...... ...++. +. +|+.... .+ .+...
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~v~v~~~-dg---~l~al 130 (571)
T 2ad6_A 61 IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG-----AG-QIVKKQA-NG---HLLAL 130 (571)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE-----TT-EEEEECT-TS---EEEEE
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEE-----CC-EEEEEeC-CC---EEEEE
Confidence 37777776552346888999 899843 232211000 001111 12 2322211 11 34445
Q ss_pred ecCC--CCeeeeccCCCCCccccceeeeEEeCCeEEEEcc------CCeEEEEeCCCCC--ce
Q 017173 186 HPGA--TEWVTDNYQNRLPFVSSIWNKLVFCNGIFYCLSL------TGWLGVFDPVKRD--WG 238 (376)
Q Consensus 186 ~~~~--~~W~~~~~~~~~p~~~~~~~~~v~~~G~~Y~l~~------~~~i~~~D~~~~~--~~ 238 (376)
+..+ -.|+.-....... ......+++.+|++|+... ++.|.+||..+++ |+
T Consensus 131 D~~tG~~~W~~~~~~~~~~--~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 131 DAKTGKINWEVEVCDPKVG--STLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp ETTTCCEEEEEECCCGGGT--CBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred ECCCCCEEEEecCCCCCcc--ceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 5544 3687532211000 0123455678999998765 5789999998764 64
No 152
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=20.84 E-value=4e+02 Score=22.89 Aligned_cols=198 Identities=4% Similarity=-0.068 Sum_probs=0.0
Q ss_pred eEEEec-CCeEEEEeCCCCeEEEEcCCCcceecCCC------------cccceeEEEeecCCCCCCeEEEEEeccCCCeE
Q 017173 114 RVCYTK-DSWLLLYRPRTHRVFFFNPFTRDMIKLPR------------FELTYQIVAFSCAPTSSSCVVFTVKHISPTVV 180 (376)
Q Consensus 114 ~~~~s~-~G~ll~~~~~~~~~~l~NP~T~~~~~LP~------------~~~~~~~~~l~~~p~~~~~~v~~i~~~~~~~~ 180 (376)
.+..+. +|-+++.....+.+.++|.-++....... .........+...|..+.+.+.+-...
T Consensus 48 ~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~----- 122 (408)
T 4a11_B 48 TLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDK----- 122 (408)
T ss_dssp EEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTS-----
T ss_pred EEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCC-----
Q ss_pred EEEEEecCCCCeeeeccCCCCCccccceeeeEEeCC-----eEEEEccCCeEEEEeCCCCCceeeeeCCCCCCccccccc
Q 017173 181 AISTCHPGATEWVTDNYQNRLPFVSSIWNKLVFCNG-----IFYCLSLTGWLGVFDPVKRDWGVLVVPPPKCPENFFAKN 255 (376)
Q Consensus 181 ~~~~y~~~~~~W~~~~~~~~~p~~~~~~~~~v~~~G-----~~Y~l~~~~~i~~~D~~~~~~~~~~~p~p~~~~~~~~~~ 255 (376)
.+.+|+..++.-...-... .....+.+..- .+.....++.|.+||+.+................
T Consensus 123 ~i~iwd~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~----- 191 (408)
T 4a11_B 123 TLKVWDTNTLQTADVFNFE------ETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILA----- 191 (408)
T ss_dssp EEEEEETTTTEEEEEEECS------SCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEE-----
T ss_pred eEEEeeCCCCccceeccCC------CceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEE-----
Q ss_pred ccceeEEEEECCcEEEEEEecCCCcEEEEEecCCccEEEe---------------eccCCcEEEeeCCcccccCCCCccc
Q 017173 256 WWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEM---------------KTLDGLTLFASFLSSQSRADLPGIM 320 (376)
Q Consensus 256 ~~~~~~Lv~~~G~LllV~~~~~~~~~V~~ld~~~~~W~~v---------------~~lg~~~lFlg~~~s~~~~~~~g~~ 320 (376)
....-+|.-+++....+..+.||.+.........+ ....+...-+ .+.. .
T Consensus 192 -----~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---------~~~~-~ 256 (408)
T 4a11_B 192 -----VSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL---------CFTS-D 256 (408)
T ss_dssp -----EEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE---------EECT-T
T ss_pred -----EEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEE---------EEcC-C
Q ss_pred cCeEEEcccccCCceEEEEecCCce
Q 017173 321 RNSVYFSKVRFFGKRCISYSLNDSR 345 (376)
Q Consensus 321 ~n~Iyf~~~~~~~~~~~vy~l~~~~ 345 (376)
++.++.... ++.+.+|++.+++
T Consensus 257 ~~~l~~~~~---dg~i~vwd~~~~~ 278 (408)
T 4a11_B 257 GLHLLTVGT---DNRMRLWNSSNGE 278 (408)
T ss_dssp SSEEEEEET---TSCEEEEETTTCC
T ss_pred CCEEEEecC---CCeEEEEECCCCc
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=20.62 E-value=3.8e+02 Score=22.49 Aligned_cols=27 Identities=0% Similarity=0.010 Sum_probs=18.8
Q ss_pred ecCCeEEEEeCCCCeEEEEcCCCccee
Q 017173 118 TKDSWLLLYRPRTHRVFFFNPFTRDMI 144 (376)
Q Consensus 118 s~~G~ll~~~~~~~~~~l~NP~T~~~~ 144 (376)
+.++.+++.....+.+.++|+.|++.+
T Consensus 8 ~~~~~~~v~~~~~~~v~~~d~~~~~~~ 34 (349)
T 1jmx_B 8 KAGHEYMIVTNYPNNLHVVDVASDTVY 34 (349)
T ss_dssp CTTCEEEEEEETTTEEEEEETTTTEEE
T ss_pred cCCCEEEEEeCCCCeEEEEECCCCcEE
Confidence 345666665555568999999998754
No 154
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=20.00 E-value=3.9e+02 Score=22.43 Aligned_cols=96 Identities=18% Similarity=0.085 Sum_probs=47.5
Q ss_pred CCeEEEEcCCCcceecCCCcccceeEEEeecCCCC--CCeEEEEEeccCCCeEEEEEEecCCCC--eeeeccCCCCCccc
Q 017173 130 THRVFFFNPFTRDMIKLPRFELTYQIVAFSCAPTS--SSCVVFTVKHISPTVVAISTCHPGATE--WVTDNYQNRLPFVS 205 (376)
Q Consensus 130 ~~~~~l~NP~T~~~~~LP~~~~~~~~~~l~~~p~~--~~~~v~~i~~~~~~~~~~~~y~~~~~~--W~~~~~~~~~p~~~ 205 (376)
...+.|+|.-+++...+-..........+...|.. +.+.+.+-. .+ .+.+|+..++. -...... .
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~--dg---~i~iwd~~~~~~~~~~~~~~------~ 111 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDF--GG---NLHIWNLEAPEMPVYSVKGH------K 111 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEET--TS---CEEEECTTSCSSCSEEECCC------S
T ss_pred CcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecC--CC---eEEEEeCCCCCccEEEEEec------c
Confidence 34688888888775433222211112233344432 455444422 11 46678776543 1111110 1
Q ss_pred cceeeeEEe-------CC-eEEEEccCCeEEEEeCCCCC
Q 017173 206 SIWNKLVFC-------NG-IFYCLSLTGWLGVFDPVKRD 236 (376)
Q Consensus 206 ~~~~~~v~~-------~G-~~Y~l~~~~~i~~~D~~~~~ 236 (376)
.....+.+. +| .+.....++.|.+||+.+..
T Consensus 112 ~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~ 150 (357)
T 3i2n_A 112 EIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD 150 (357)
T ss_dssp SCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS
T ss_pred cceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC
Confidence 223333332 34 45555568899999998764
Done!