BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017175
(376 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 230 bits (587), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 127/290 (43%), Positives = 176/290 (60%), Gaps = 6/290 (2%)
Query: 59 FTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR-EFLVEV 117
F+ REL + NF +LG GGFG+VYKGRL + +VA+K+L QG +F EV
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERXQGGELQFQTEV 86
Query: 118 LMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA 177
M+S+ H NL+ L G+C +RLLVY YM GS+ L + P + LDW R RIA
Sbjct: 87 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 146
Query: 178 GAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMG 237
G+A+GL YLHD +P +I+RD+K +NILL E + + DFGLAKL D HV V G
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXAVRG 205
Query: 238 TYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHN--LVAWARPLFK 295
T G+ APEY TG+ + K+DV+ +GV+LLE+ITG++A D R A + + L+ W + L K
Sbjct: 206 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 265
Query: 296 DRRKFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTAL 345
+ +K + D LQG Y + Q + VA +C Q P RP +++VV L
Sbjct: 266 E-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 175/290 (60%), Gaps = 6/290 (2%)
Query: 59 FTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR-EFLVEV 117
F+ REL + NF +LG GGFG+VYKGRL + +VA+K+L QG +F EV
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRL-ADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 118 LMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA 177
M+S+ H NL+ L G+C +RLLVY YM GS+ L + P + LDW R RIA
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 138
Query: 178 GAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMG 237
G+A+GL YLHD +P +I+RD+K +NILL E + + DFGLAKL D HV V G
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXAVRG 197
Query: 238 TYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHN--LVAWARPLFK 295
G+ APEY TG+ + K+DV+ +GV+LLE+ITG++A D R A + + L+ W + L K
Sbjct: 198 XIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257
Query: 296 DRRKFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTAL 345
+ +K + D LQG Y + Q + VA +C Q P RP +++VV L
Sbjct: 258 E-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 163/287 (56%), Gaps = 9/287 (3%)
Query: 63 ELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSL 122
+L T NF L+G G FG+VYKG L +V A+K+ QG EF E+ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKV-ALKRRTPESSQGIEEFETEIETLSF 91
Query: 123 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLH--DLPPDKKRLDWTTRMRIAAGAA 180
HP+LV+LIG+C + ++ +L+Y+YM G+L+ HL+ DLP + W R+ I GAA
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT--MSMSWEQRLEICIGAA 149
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL YLH +A +I+RD+K NILL E + PK++DFG++K G D+TH+ V GT G
Sbjct: 150 RGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLG 206
Query: 241 YCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKF 300
Y PEY + G+LT KSDVYSFGVVL E++ R AI + NL WA + +
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE-SHNNGQL 265
Query: 301 SQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTY 347
Q+ DP L + L + A C+ RP + DV+ L Y
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 191 bits (484), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 162/287 (56%), Gaps = 9/287 (3%)
Query: 63 ELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSL 122
+L T NF L+G G FG+VYKG L +V A+K+ QG EF E+ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKV-ALKRRTPESSQGIEEFETEIETLSF 91
Query: 123 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLH--DLPPDKKRLDWTTRMRIAAGAA 180
HP+LV+LIG+C + ++ +L+Y+YM G+L+ HL+ DLP + W R+ I GAA
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT--MSMSWEQRLEICIGAA 149
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL YLH +A +I+RD+K NILL E + PK++DFG++K G +TH+ V GT G
Sbjct: 150 RGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLG 206
Query: 241 YCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKF 300
Y PEY + G+LT KSDVYSFGVVL E++ R AI + NL WA + +
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE-SHNNGQL 265
Query: 301 SQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTY 347
Q+ DP L + L + A C+ RP + DV+ L Y
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 168/300 (56%), Gaps = 30/300 (10%)
Query: 57 HTFTFRELAAVTKNFRADCL------LGEGGFGRVYKGRLESTNQVVAIKQL----DRNG 106
H+F+F EL VT NF + +GEGGFG VYKG + N VA+K+L D
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITT 70
Query: 107 LQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDL---PPD 163
+ ++F E+ +++ H NLV L+G+ +DGD LVY YMP GSL D L L PP
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP- 129
Query: 164 KKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLG 223
L W R +IA GAA G+ +LH+ + I+RD+K +NILL E + K+SDFGLA+
Sbjct: 130 ---LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS 183
Query: 224 PVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGE 283
+T + +R++GT Y APE A+ G++T KSD+YSFGVVLLEIITG A+D R
Sbjct: 184 EKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP-- 240
Query: 284 HNLVAWARPLFKDRRKFSQMADPTLQ--GQYPVRGLYQALAVAAMCVQEQPNMRPLIADV 341
L+ + + + D + V +Y +VA+ C+ E+ N RP I V
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMY---SVASQCLHEKKNKRPDIKKV 297
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 167/300 (55%), Gaps = 30/300 (10%)
Query: 57 HTFTFRELAAVTKNFRADCL------LGEGGFGRVYKGRLESTNQVVAIKQL----DRNG 106
H+F+F EL VT NF + +GEGGFG VYKG + N VA+K+L D
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITT 70
Query: 107 LQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDL---PPD 163
+ ++F E+ +++ H NLV L+G+ +DGD LVY YMP GSL D L L PP
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP- 129
Query: 164 KKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLG 223
L W R +IA GAA G+ +LH+ + I+RD+K +NILL E + K+SDFGLA+
Sbjct: 130 ---LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS 183
Query: 224 PVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGE 283
+T + R++GT Y APE A+ G++T KSD+YSFGVVLLEIITG A+D R
Sbjct: 184 EKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP-- 240
Query: 284 HNLVAWARPLFKDRRKFSQMADPTLQ--GQYPVRGLYQALAVAAMCVQEQPNMRPLIADV 341
L+ + + + D + V +Y +VA+ C+ E+ N RP I V
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMY---SVASQCLHEKKNKRPDIKKV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 166/300 (55%), Gaps = 30/300 (10%)
Query: 57 HTFTFRELAAVTKNFRADCL------LGEGGFGRVYKGRLESTNQVVAIKQL----DRNG 106
H+F+F EL VT NF + +GEGGFG VYKG + N VA+K+L D
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITT 64
Query: 107 LQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDL---PPD 163
+ ++F E+ +++ H NLV L+G+ +DGD LVY YMP GSL D L L PP
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP- 123
Query: 164 KKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLG 223
L W R +IA GAA G+ +LH+ + I+RD+K +NILL E + K+SDFGLA+
Sbjct: 124 ---LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS 177
Query: 224 PVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGE 283
+ + R++GT Y APE A+ G++T KSD+YSFGVVLLEIITG A+D R
Sbjct: 178 EKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP-- 234
Query: 284 HNLVAWARPLFKDRRKFSQMADPTLQ--GQYPVRGLYQALAVAAMCVQEQPNMRPLIADV 341
L+ + + + D + V +Y +VA+ C+ E+ N RP I V
Sbjct: 235 QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMY---SVASQCLHEKKNKRPDIKKV 291
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 174 bits (440), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 163/305 (53%), Gaps = 40/305 (13%)
Query: 57 HTFTFRELAAVTKNFRADCL------LGEGGFGRVYKGRLESTNQVVAIKQL----DRNG 106
H+F+F EL VT NF + GEGGFG VYKG + N VA+K+L D
Sbjct: 4 HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITT 61
Query: 107 LQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDL---PPD 163
+ ++F E+ + + H NLV L+G+ +DGD LVY Y P GSL D L L PP
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP- 120
Query: 164 KKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLG 223
L W R +IA GAA G+ +LH+ + I+RD+K +NILL E + K+SDFGLA+
Sbjct: 121 ---LSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS 174
Query: 224 PVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTR---- 279
+ +R++GT Y APE A+ G++T KSD+YSFGVVLLEIITG A+D R
Sbjct: 175 EKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 233
Query: 280 ---AAGEHNLVAWARPLFKDRRKFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRP 336
E + D++ AD T V Y +VA+ C+ E+ N RP
Sbjct: 234 LLDIKEEIEDEEKTIEDYIDKK--XNDADST-----SVEAXY---SVASQCLHEKKNKRP 283
Query: 337 LIADV 341
I V
Sbjct: 284 DIKKV 288
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 134/285 (47%), Gaps = 26/285 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR--EFLVEVLMLSLLHHPNLVNLIGY 134
+G G FG V++ ++ VA+K L R EFL EV ++ L HPN+V +G
Sbjct: 45 IGAGSFGTVHRAEWHGSD--VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+V EY+ GSL LH +++LD R+ +A AKG+ YLH++ NPP+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPI 160
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTL 254
++RDLK N+L+ + Y K+ DFGL++L S GT + APE
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRLK--ASXFLXSKXAAGTPEWMAPEVLRDEPSNE 218
Query: 255 KSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRR-KFSQMADPTLQGQYP 313
KSDVYSFGV+L E+ T ++ N A V FK +R + + +P
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG-----FKCKRLEIPRNLNP------- 266
Query: 314 VRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYLACQKYDPESQ 358
Q A+ C +P RP A ++ L L P ++
Sbjct: 267 -----QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNR 306
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 138/286 (48%), Gaps = 28/286 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR--EFLVEVLMLSLLHHPNLVNLIGY 134
+G G FG V++ ++ VA+K L R EFL EV ++ L HPN+V +G
Sbjct: 45 IGAGSFGTVHRAEWHGSD--VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+V EY+ GSL LH +++LD R+ +A AKG+ YLH++ NPP+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPI 160
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYAMTGQLT 253
++R+LK N+L+ + Y K+ DFGL++L T +S++ GT + APE
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRLKA---STFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 254 LKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRR-KFSQMADPTLQGQY 312
KSDVYSFGV+L E+ T ++ N A V FK +R + + +P
Sbjct: 218 EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG-----FKCKRLEIPRNLNP------ 266
Query: 313 PVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYLACQKYDPESQ 358
Q A+ C +P RP A ++ L L P ++
Sbjct: 267 ------QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNR 306
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 138/286 (48%), Gaps = 39/286 (13%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQL---DRNG----LQGNREFLVEVLMLSLLHHPNLV 129
+G+GGFG V+KGRL VVAIK L D G ++ +EF EV ++S L+HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
L G + + +V E++P G L L D + W+ ++R+ A G+EY+ ++
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 190 ANPPVIYRDLKCSNILL-----GEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
NPP+++RDL+ NI L K++DFGL++ H + ++G + + AP
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 245 EY--AMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQ 302
E A T K+D YSF ++L I+TG D + G+ + R +
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY-SYGKIKFINMIR---------EE 245
Query: 303 MADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYL 348
PT+ P R V +C P RP + +V L+ L
Sbjct: 246 GLRPTIPEDCPPR----LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 137/286 (47%), Gaps = 39/286 (13%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQL---DRNG----LQGNREFLVEVLMLSLLHHPNLV 129
+G+GGFG V+KGRL VVAIK L D G ++ +EF EV ++S L+HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
L G + + +V E++P G L H L + W+ ++R+ A G+EY+ ++
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDL---YHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 190 ANPPVIYRDLKCSNILL-----GEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
NPP+++RDL+ NI L K++DF L++ H + ++G + + AP
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 245 EY--AMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQ 302
E A T K+D YSF ++L I+TG D + G+ + R +
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY-SYGKIKFINMIR---------EE 245
Query: 303 MADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYL 348
PT+ P R V +C P RP + +V L+ L
Sbjct: 246 GLRPTIPEDCPPR----LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 137/286 (47%), Gaps = 39/286 (13%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQL---DRNG----LQGNREFLVEVLMLSLLHHPNLV 129
+G+GGFG V+KGRL VVAIK L D G ++ +EF EV ++S L+HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
L G + + +V E++P G L H L + W+ ++R+ A G+EY+ ++
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDL---YHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 190 ANPPVIYRDLKCSNILL-----GEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
NPP+++RDL+ NI L K++DFG ++ H + ++G + + AP
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 245 EY--AMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQ 302
E A T K+D YSF ++L I+TG D + G+ + R +
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY-SYGKIKFINMIR---------EE 245
Query: 303 MADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYL 348
PT+ P R V +C P RP + +V L+ L
Sbjct: 246 GLRPTIPEDCPPR----LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ + + +A + +EYL K I+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN---FIH 132
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ ++ + +A + +EYL K I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+V EYMP G+L D+L + +++ + + +A + +EYL K I+
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLREC--NREEVTAVVLLYMATQISSAMEYLEKKN---FIH 153
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE ++KS
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 213 DVWAFGVLLWEIAT 226
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ ++ + +A + +EYL K I+
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 135
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 195 DVWAFGVLLWEIAT 208
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ ++ + +A + +EYL K I+
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ ++ + +A + +EYL K I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ ++ + +A + +EYL K I+
Sbjct: 81 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 135
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 195 DVWAFGVLLWEIAT 208
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ ++ + +A + +EYL K I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ ++ + +A + +EYL K I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ ++ + +A + +EYL K I+
Sbjct: 84 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 138
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 198 DVWAFGVLLWEIAT 211
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ ++ + +A + +EYL K I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ + + +A + +EYL K I+
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN---FIH 132
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ ++ + +A + +EYL K I+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 136
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ ++ + +A + +EYL K I+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 136
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 127/293 (43%), Gaps = 43/293 (14%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LGEG FG+V+ E +VA+K L ++F E +L++L H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRL-----------DWTTRMRIAAGAA 180
G C +G L+V+EYM G L L PD K L + +A+ A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
G+ YL A ++RDL N L+G+G K+ DFG+++ D V R M
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 241 YCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRK----AIDNTRAAGEHNLVAWARPLFKD 296
+ PE + + T +SDV+SFGVVL EI T K + NT A + + R L +
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI---DCITQGRELERP 253
Query: 297 RRKFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYLA 349
R A P + A+ C Q +P R I DV L LA
Sbjct: 254 R------ACPP-----------EVYAIMRGCWQREPQQRHSIKDVHARLQALA 289
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 127/293 (43%), Gaps = 43/293 (14%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LGEG FG+V+ E +VA+K L ++F E +L++L H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRL-----------DWTTRMRIAAGAA 180
G C +G L+V+EYM G L L PD K L + +A+ A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
G+ YL A ++RDL N L+G+G K+ DFG+++ D V R M
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 241 YCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRK----AIDNTRAAGEHNLVAWARPLFKD 296
+ PE + + T +SDV+SFGVVL EI T K + NT A + + R L +
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI---DCITQGRELERP 259
Query: 297 RRKFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYLA 349
R A P + A+ C Q +P R I DV L LA
Sbjct: 260 R------ACPP-----------EVYAIMRGCWQREPQQRHSIKDVHARLQALA 295
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 139/330 (42%), Gaps = 48/330 (14%)
Query: 44 EASKDGGSDHIAAHTFTFRELAAVTKNFRADCLL----GEGGFGRVYKGRL-----ESTN 94
E G HI + F + A V R D +L GEG FG+V+ E
Sbjct: 13 EGKGSGLQGHIIENPQYFSD-ACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDK 71
Query: 95 QVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLE 154
+VA+K L ++F E +L++L H ++V G C +G L+V+EYM G L
Sbjct: 72 MLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 131
Query: 155 DHLHDLPPDKKRL-----------DWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSN 203
L PD K L + +A+ A G+ YL A ++RDL N
Sbjct: 132 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRN 188
Query: 204 ILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGV 263
L+G+G K+ DFG+++ D V R M + PE + + T +SDV+SFGV
Sbjct: 189 CLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGV 248
Query: 264 VLLEIITGRK----AIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQYPVRGLYQ 319
VL EI T K + NT A + + R L + R A P +
Sbjct: 249 VLWEIFTYGKQPWYQLSNTEAI---DCITQGRELERPR------ACPP-----------E 288
Query: 320 ALAVAAMCVQEQPNMRPLIADVVTALTYLA 349
A+ C Q +P R I DV L LA
Sbjct: 289 VYAIMRGCWQREPQQRHSIKDVHARLQALA 318
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ ++ + +A + +EYL K I+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 136
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ ++ + +A + +EYL K I+
Sbjct: 93 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 147
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 207 DVWAFGVLLWEIAT 220
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ + + +A + +EYL K I+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ + + +A + +EYL K I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ + + +A + +EYL K I+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN---FIH 132
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRL-MTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ + + +A + +EYL K I+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ + + +A + +EYL K I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ + + +A + +EYL K I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
LG+G FG V Y ++T +VVA+K+L + + R+F E+ +L L H N+V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 133 GYCADGDQR--LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G C +R L+ EY+P GSL D+L K+R+D ++ + KG+EYL K
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR 133
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAM 248
I+RDL NIL+ K+ DFGL K+ P DK + G + APE
Sbjct: 134 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 189
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ ++ SDV+SFGVVL E+ T
Sbjct: 190 ESKFSVASDVWSFGVVLYELFT 211
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
LG+G FG V Y ++T +VVA+K+L + + R+F E+ +L L H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 133 GYCADGDQR--LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G C +R L+ EY+P GSL D+L K+R+D ++ + KG+EYL K
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAM 248
I+RDL NIL+ K+ DFGL K+ P DK + G + APE
Sbjct: 135 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEFFKVKEPGESPIFWYAPESLT 190
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ ++ SDV+SFGVVL E+ T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
LG+G FG V Y ++T +VVA+K+L + + R+F E+ +L L H N+V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 133 GYCADGDQR--LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G C +R L+ EY+P GSL D+L K+R+D ++ + KG+EYL K
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR 165
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAM 248
I+RDL NIL+ K+ DFGL K+ P DK + G + APE
Sbjct: 166 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 221
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ ++ SDV+SFGVVL E+ T
Sbjct: 222 ESKFSVASDVWSFGVVLYELFT 243
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
LG+G FG V Y ++T +VVA+K+L + + R+F E+ +L L H N+V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 133 GYCADGDQR--LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G C +R L+ EY+P GSL D+L K+R+D ++ + KG+EYL K
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR 140
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAM 248
I+RDL NIL+ K+ DFGL K+ P DK + G + APE
Sbjct: 141 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 196
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ ++ SDV+SFGVVL E+ T
Sbjct: 197 ESKFSVASDVWSFGVVLYELFT 218
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
LG+G FG V Y ++T +VVA+K+L + + R+F E+ +L L H N+V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 133 GYCADGDQR--LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G C +R L+ EY+P GSL D+L K+R+D ++ + KG+EYL K
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR 132
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAM 248
I+RDL NIL+ K+ DFGL K+ P DK + G + APE
Sbjct: 133 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 188
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ ++ SDV+SFGVVL E+ T
Sbjct: 189 ESKFSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
LG+G FG V Y ++T +VVA+K+L + + R+F E+ +L L H N+V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 133 GYCADGDQR--LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G C +R L+ EY+P GSL D+L K+R+D ++ + KG+EYL K
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR 138
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAM 248
I+RDL NIL+ K+ DFGL K+ P DK + G + APE
Sbjct: 139 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 194
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ ++ SDV+SFGVVL E+ T
Sbjct: 195 ESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
LG+G FG V Y ++T +VVA+K+L + + R+F E+ +L L H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 133 GYCADGDQR--LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G C +R L+ EY+P GSL D+L K+R+D ++ + KG+EYL K
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAM 248
I+RDL NIL+ K+ DFGL K+ P DK + G + APE
Sbjct: 135 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 190
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ ++ SDV+SFGVVL E+ T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
LG+G FG V Y ++T +VVA+K+L + + R+F E+ +L L H N+V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 133 GYCADGDQR--LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G C +R L+ EY+P GSL D+L K+R+D ++ + KG+EYL K
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR 141
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAM 248
I+RDL NIL+ K+ DFGL K+ P DK + G + APE
Sbjct: 142 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 197
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ ++ SDV+SFGVVL E+ T
Sbjct: 198 ESKFSVASDVWSFGVVLYELFT 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
LG+G FG V Y ++T +VVA+K+L + + R+F E+ +L L H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 133 GYCADGDQR--LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G C +R L+ EY+P GSL D+L K+R+D ++ + KG+EYL K
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAM 248
I+RDL NIL+ K+ DFGL K+ P DK + G + APE
Sbjct: 135 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 190
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ ++ SDV+SFGVVL E+ T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
LG+G FG V Y ++T +VVA+K+L + + R+F E+ +L L H N+V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 133 GYCADGDQR--LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G C +R L+ EY+P GSL D+L K+R+D ++ + KG+EYL K
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR 139
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAM 248
I+RDL NIL+ K+ DFGL K+ P DK + G + APE
Sbjct: 140 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 195
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ ++ SDV+SFGVVL E+ T
Sbjct: 196 ESKFSVASDVWSFGVVLYELFT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
LG+G FG V Y ++T +VVA+K+L + + R+F E+ +L L H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 133 GYCADGDQR--LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G C +R L+ EY+P GSL D+L K+R+D ++ + KG+EYL K
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAM 248
I+RDL NIL+ K+ DFGL K+ P DK + G + APE
Sbjct: 138 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 193
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ ++ SDV+SFGVVL E+ T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ ++ + +A + +EYL K I+
Sbjct: 326 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 380
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
R+L N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 439
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 440 DVWAFGVLLWEIAT 453
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ ++ + +A + +EYL K I+
Sbjct: 284 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 338
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
R+L N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 397
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 398 DVWAFGVLLWEIAT 411
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
LG+G FG V Y ++T +VVA+K+L + + R+F E+ +L L H N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 133 GYCADGDQR--LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G C +R L+ EY+P GSL D+L K+R+D ++ + KG+EYL K
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAM 248
I+RDL NIL+ K+ DFGL K+ P DK + G + APE
Sbjct: 153 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 208
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ ++ SDV+SFGVVL E+ T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
LG+G FG V Y ++T +VVA+K+L + + R+F E+ +L L H N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 133 GYCADGDQR--LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G C +R L+ EY+P GSL D+L K+R+D ++ + KG+EYL K
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAM 248
I+RDL NIL+ K+ DFGL K+ P DK + G + APE
Sbjct: 153 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 208
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ ++ SDV+SFGVVL E+ T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 7/194 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ E+M G+L D+L + +++ + + +A + +EYL K I+
Sbjct: 287 REPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN---FIH 341
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
R+L N L+GE + K++DFGL++L GD + APE + ++KS
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 400
Query: 257 DVYSFGVVLLEIIT 270
DV++FGV+L EI T
Sbjct: 401 DVWAFGVLLWEIAT 414
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 15/202 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
LG+G FG V Y ++T +VVA+K+L + + R+F E+ +L L H N+V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 133 GYCADGDQR--LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G C +R L+ EY+P GSL D+L K+R+D ++ + KG+EYL K
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR 135
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAM 248
I+R+L NIL+ K+ DFGL K+ P DK + + G + APE
Sbjct: 136 ---YIHRNLATRNILVENENRVKIGDFGLTKVLP-QDKEYYKVKEPGESPIFWYAPESLT 191
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ ++ SDV+SFGVVL E+ T
Sbjct: 192 ESKFSVASDVWSFGVVLYELFT 213
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 143/304 (47%), Gaps = 49/304 (16%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
K + ++G G FG V K + + + VAIKQ++ + + F+VE+ LS ++HPN+
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKD--VAIKQIESESER--KAFIVELRQLSRVNHPNI 64
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTR---MRIAAGAAKGLEY 185
V L G C + LV EY GSL + LH P L + T M ++G+ Y
Sbjct: 65 VKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEP----LPYYTAAHAMSWCLQCSQGVAY 118
Query: 186 LHDKANPPVIYRDLKCSNILL-GEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
LH +I+RDLK N+LL G K+ DFG A +TH+ T G+ + AP
Sbjct: 119 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWMAP 173
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWA------RPLFKDRR 298
E + K DV+S+G++L E+IT RK D G + WA PL K+
Sbjct: 174 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAVHNGTRPPLIKNLP 231
Query: 299 KFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYLACQKYDPES- 357
K P+ L C + P+ RP + ++V +T+L +Y P +
Sbjct: 232 K-------------PIESL------MTRCWSKDPSQRPSMEEIVKIMTHL--MRYFPGAD 270
Query: 358 QPVQ 361
+P+Q
Sbjct: 271 EPLQ 274
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 143/304 (47%), Gaps = 49/304 (16%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
K + ++G G FG V K + + + VAIKQ++ + + F+VE+ LS ++HPN+
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKD--VAIKQIESESER--KAFIVELRQLSRVNHPNI 63
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTR---MRIAAGAAKGLEY 185
V L G C + LV EY GSL + LH P L + T M ++G+ Y
Sbjct: 64 VKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEP----LPYYTAAHAMSWCLQCSQGVAY 117
Query: 186 LHDKANPPVIYRDLKCSNILL-GEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
LH +I+RDLK N+LL G K+ DFG A +TH+ T G+ + AP
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWMAP 172
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWA------RPLFKDRR 298
E + K DV+S+G++L E+IT RK D G + WA PL K+
Sbjct: 173 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAVHNGTRPPLIKNLP 230
Query: 299 KFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYLACQKYDPES- 357
K P+ L C + P+ RP + ++V +T+L +Y P +
Sbjct: 231 K-------------PIESL------MTRCWSKDPSQRPSMEEIVKIMTHL--MRYFPGAD 269
Query: 358 QPVQ 361
+P+Q
Sbjct: 270 EPLQ 273
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 77 LGEGGFGRVYKGRLESTN-----QVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LGEG FG+V+ + + +VA+K L L ++F E +L+ L H ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD------------KKRLDWTTRMRIAAGA 179
G C DGD ++V+EYM G L L PD K L + + IA+
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 180 AKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY 239
A G+ YL A+ ++RDL N L+G K+ DFG+++ D V M
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 240 GYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ PE M + T +SDV+SFGV+L EI T
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
LG+G FG V Y ++T +VVA+K+L + + R+F E+ +L L H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 133 GYCADGDQR--LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G C +R L+ EY+P GSL D+L +R+D ++ + KG+EYL K
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---AHAERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAM 248
I+RDL NIL+ K+ DFGL K+ P DK + G + APE
Sbjct: 138 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 193
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ ++ SDV+SFGVVL E+ T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
LG+G FG V Y ++T +VVA+K+L + + R+F E+ +L L H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 133 GYCADGDQR--LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G C +R L+ E++P GSL ++L K+R+D ++ + KG+EYL K
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAM 248
I+RDL NIL+ K+ DFGL K+ P DK + G + APE
Sbjct: 138 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 193
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ ++ SDV+SFGVVL E+ T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 77 LGEGGFGRVYKGRLE----STNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
LG+G FG V R + +T +VA+KQL +G R+F E+ +L LH +V
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 133 GYC-ADGDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G G Q L LV EY+P G L D L + RLD + + ++ KG+EYL +
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEYLGSRR 134
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAM 248
++RDL NIL+ H K++DFGLAKL P+ DK + R G + APE
Sbjct: 135 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLS 190
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ +SDV+SFGVVL E+ T
Sbjct: 191 DNIFSRQSDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 77 LGEGGFGRVYKGRLE----STNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
LG+G FG V R + +T +VA+KQL +G R+F E+ +L LH +V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 133 GYC-ADGDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G G Q L LV EY+P G L D L + RLD + + ++ KG+EYL +
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEYLGSRR 147
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAM 248
++RDL NIL+ H K++DFGLAKL P+ DK + R G + APE
Sbjct: 148 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLS 203
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ +SDV+SFGVVL E+ T
Sbjct: 204 DNIFSRQSDVWSFGVVLYELFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 77 LGEGGFGRVYKGRLE----STNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
LG+G FG V R + +T +VA+KQL +G R+F E+ +L LH +V
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 133 GYC-ADGDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G G Q L LV EY+P G L D L + RLD + + ++ KG+EYL +
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEYLGSRR 135
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAM 248
++RDL NIL+ H K++DFGLAKL P+ DK + R G + APE
Sbjct: 136 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLS 191
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ +SDV+SFGVVL E+ T
Sbjct: 192 DNIFSRQSDVWSFGVVLYELFT 213
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 68 TKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSL-L 123
++F +LG+G FG+V+ + TNQ AIK L ++ + + + +VE +LSL
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 124 HHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGL 183
HP L ++ + V EY+ G L H+ + D + AA GL
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC----HKFDLSRATFYAAEIILGL 132
Query: 184 EYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCA 243
++LH K ++YRDLK NILL + H K++DFG+ K +GD + GT Y A
Sbjct: 133 QFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNEFCGTPDYIA 187
Query: 244 PEYAMTGQLTLKSDVYSFGVVLLEIITGR 272
PE + + D +SFGV+L E++ G+
Sbjct: 188 PEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 125/290 (43%), Gaps = 39/290 (13%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LGEG FG+V+ E +VA+K L ++F E +L+ L H ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDK---------KRLDWTTRMRIAAGAAKG 182
G C +GD ++V+EYM G L L PD L + + IA A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 183 LEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYC 242
+ YL A+ ++RDL N L+GE K+ DFG+++ D V M +
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 243 APEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQ 302
PE M + T +SDV+S GVVL EI T K +P ++ ++
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGK-----------------QPWYQLSN--NE 238
Query: 303 MADPTLQG---QYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYLA 349
+ + QG Q P + + C Q +P+MR I + T L LA
Sbjct: 239 VIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 68 TKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSL-L 123
++F +LG+G FG+V+ + TNQ AIK L ++ + + + +VE +LSL
Sbjct: 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 124 HHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGL 183
HP L ++ + V EY+ G L H+ + D + AA GL
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC----HKFDLSRATFYAAEIILGL 131
Query: 184 EYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCA 243
++LH K ++YRDLK NILL + H K++DFG+ K +GD + GT Y A
Sbjct: 132 QFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXFCGTPDYIA 186
Query: 244 PEYAMTGQLTLKSDVYSFGVVLLEIITGR 272
PE + + D +SFGV+L E++ G+
Sbjct: 187 PEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 77 LGEGGFGRVYKGRLE----STNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
LG+G FG V R + +T +VA+KQL +G R+F E+ +L LH +V
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 133 G--YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G Y + LV EY+P G L D L + RLD + + ++ KG+EYL +
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEYLGSRR 131
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAM 248
++RDL NIL+ H K++DFGLAKL P+ DK R G + APE
Sbjct: 132 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDXXVVREPGQSPIFWYAPESLS 187
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ +SDV+SFGVVL E+ T
Sbjct: 188 DNIFSRQSDVWSFGVVLYELFT 209
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 108/213 (50%), Gaps = 31/213 (14%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQL----DRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
++G GGFG+VY+ VA+K D + Q E + ++L HPN++ L
Sbjct: 14 IIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHD--LPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
G C LV E+ G L L +PPD ++W ++ A+G+ YLHD+
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDI-LVNWAVQI------ARGMNYLHDE 124
Query: 190 ANPPVIYRDLKCSNILLGEGYHP--------KLSDFGLAKLGPVGDKTHVSTRV--MGTY 239
A P+I+RDLK SNIL+ + K++DFGLA+ + H +T++ G Y
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------EWHRTTKMSAAGAY 178
Query: 240 GYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGR 272
+ APE + SDV+S+GV+L E++TG
Sbjct: 179 AWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 108/196 (55%), Gaps = 13/196 (6%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V+ G + N VAIK L + G FL E ++ L H LV L +
Sbjct: 17 LGNGQFGEVWMGTW-NGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ + +V EYM GSL D L D + + L + +AA A G+ Y+ ++ N I+
Sbjct: 75 E-EPIYIVTEYMNKGSLLDFLKD--GEGRALKLPNLVDMAAQVAAGMAYI-ERMN--YIH 128
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYAMTGQLTL 254
RDL+ +NIL+G G K++DFGLA+L + + R + + APE A+ G+ T+
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRFTI 185
Query: 255 KSDVYSFGVVLLEIIT 270
KSDV+SFG++L E++T
Sbjct: 186 KSDVWSFGILLTELVT 201
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
++ R + LG+G FG V+ G T +V AIK L + G FL E ++ L H L
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 324
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
V L ++ + +V EYM GSL D L RL M AA A G+ Y+ +
Sbjct: 325 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQIASGMAYV-E 380
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYA 247
+ N ++RDL+ +NIL+GE K++DFGLA+L + D + + + + APE A
Sbjct: 381 RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 436
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ G+ T+KSDV+SFG++L E+ T
Sbjct: 437 LYGRFTIKSDVWSFGILLTELTT 459
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
++ R + LG+G FG V+ G T +V AIK L + G FL E ++ L H L
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 241
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
V L ++ + +V EYM GSL D L RL M AA A G+ Y+ +
Sbjct: 242 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQIASGMAYV-E 297
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYA 247
+ N ++RDL+ +NIL+GE K++DFGLA+L + D + + + + APE A
Sbjct: 298 RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 353
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ G+ T+KSDV+SFG++L E+ T
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTT 376
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
++ R + LG+G FG V+ G T +V AIK L + G FL E ++ L H L
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 68
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
V L ++ + +V EYM GSL D L RL M AA A G+ Y+ +
Sbjct: 69 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQIASGMAYV-E 124
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYA 247
+ N ++RDL+ +NIL+GE K++DFGLA+L + D + + + + APE A
Sbjct: 125 RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 180
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ G+ T+KSDV+SFG++L E+ T
Sbjct: 181 LYGRFTIKSDVWSFGILLTELTT 203
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
++ R + LG+G FG V+ G T +V AIK L + G FL E ++ L H L
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 241
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
V L ++ + +V EYM GSL D L RL M AA A G+ Y+ +
Sbjct: 242 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQIASGMAYV-E 297
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYA 247
+ N ++RDL+ +NIL+GE K++DFGLA+L + D + + + + APE A
Sbjct: 298 RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 353
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ G+ T+KSDV+SFG++L E+ T
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTT 376
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
++ R + LG+G FG V+ G T +V AIK L + G FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
V L ++ + +V EYM GSL D L RL M AA A G+ Y+ +
Sbjct: 76 VQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYV-E 131
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYA 247
+ N ++RDL+ +NIL+GE K++DFGLA+L + D + + + + APE A
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 187
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ G+ T+KSDV+SFG++L E+ T
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 109/204 (53%), Gaps = 13/204 (6%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
++ R + LG+G FG V+ G T +V AIK L + G FL E ++ L H L
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 65
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
V L ++ + +V EYM GSL D L RL M AA A G+ Y+ +
Sbjct: 66 VQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQIASGMAYV-E 121
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEY 246
+ N ++RDL+ +NIL+GE K++DFGLA+L + + R + + APE
Sbjct: 122 RMN--YVHRDLRAANILVGENLVCKVADFGLARLI---EDNEXTARQGAKFPIKWTAPEA 176
Query: 247 AMTGQLTLKSDVYSFGVVLLEIIT 270
A+ G+ T+KSDV+SFG++L E+ T
Sbjct: 177 ALYGRFTIKSDVWSFGILLTELTT 200
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
++ R + LG+G FG V+ G T +V AIK L + G FL E ++ L H L
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 64
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
V L ++ + +V EYM GSL D L RL M AA A G+ Y+ +
Sbjct: 65 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYV-E 120
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYA 247
+ N ++RDL+ +NIL+GE K++DFGLA+L + D + + + + APE A
Sbjct: 121 RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 176
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ G+ T+KSDV+SFG++L E+ T
Sbjct: 177 LYGRFTIKSDVWSFGILLTELTT 199
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
++ R + LG+G FG V+ G T +V AIK L + G FL E ++ L H L
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 66
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
V L ++ + +V EYM GSL D L RL M AA A G+ Y+ +
Sbjct: 67 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYV-E 122
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYA 247
+ N ++RDL+ +NIL+GE K++DFGLA+L + D + + + + APE A
Sbjct: 123 RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 178
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ G+ T+KSDV+SFG++L E+ T
Sbjct: 179 LYGRFTIKSDVWSFGILLTELTT 201
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
++ R + LG+G FG V+ G T +V AIK L + G FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
V L ++ + +V EYM GSL D L RL M AA A G+ Y+ +
Sbjct: 76 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYV-E 131
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYA 247
+ N ++RDL+ +NIL+GE K++DFGLA+L + D + + + + APE A
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 187
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ G+ T+KSDV+SFG++L E+ T
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
++ R + LG+G FG V+ G T +V AIK L + G FL E ++ L H L
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 241
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
V L ++ + +V EYM GSL D L RL M AA A G+ Y+ +
Sbjct: 242 VQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQIASGMAYV-E 297
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYA 247
+ N ++RDL+ +NIL+GE K++DFGLA+L + D + + + + APE A
Sbjct: 298 RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 353
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ G+ T+KSDV+SFG++L E+ T
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTT 376
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
++ R + LG+G FG V+ G T +V AIK L + G FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
V L ++ + +V EYM GSL D L RL M AA A G+ Y+ +
Sbjct: 76 VQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYV-E 131
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYA 247
+ N ++RDL+ +NIL+GE K++DFGLA+L + D + + + + APE A
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 187
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ G+ T+KSDV+SFG++L E+ T
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
++ R + LG+G FG V+ G T +V AIK L + G FL E ++ + H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKIRHEKL 75
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
V L ++ + +V EYM GSL D L RL M AA A G+ Y+ +
Sbjct: 76 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYV-E 131
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYA 247
+ N ++RDL+ +NIL+GE K++DFGLA+L + D + + + + APE A
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 187
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ G+ T+KSDV+SFG++L E+ T
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
++ R + LG+G FG V+ G T +V AIK L + G FL E ++ L H L
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 72
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
V L ++ + +V EYM GSL D L RL M +A A G+ Y+ +
Sbjct: 73 VQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDM--SAQIASGMAYV-E 128
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYA 247
+ N ++RDL+ +NIL+GE K++DFGLA+L + D + + + + APE A
Sbjct: 129 RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 184
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ G+ T+KSDV+SFG++L E+ T
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTT 207
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 27/278 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGL--QGNREFLVEVLMLSLLHHPNLVNLIGY 134
+G G FG VYKG+ VA+K L+ Q + F EV +L H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+ Q +V ++ SL HLH + + + + + IA A+G++YLH K+ +
Sbjct: 73 -STAPQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMT---GQ 251
I+RDLK +NI L E K+ DFGLA + +H ++ G+ + APE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQ 311
+ +SDVY+FG+VL E++TG+ N + + L D K ++
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK-- 243
Query: 312 YPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYLA 349
+ A C++++ + RPL ++ ++ LA
Sbjct: 244 ----------RLMAECLKKKRDERPLFPQILASIELLA 271
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 109/204 (53%), Gaps = 13/204 (6%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
++ R + LG+G FG V+ G T +V AIK L + G FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
V L ++ + +V EYM GSL D L RL M AA A G+ Y+ +
Sbjct: 76 VQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYV-E 131
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEY 246
+ N ++RDL+ +NIL+GE K++DFGLA+L + + R + + APE
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARLI---EDNEXTARQGAKFPIKWTAPEA 186
Query: 247 AMTGQLTLKSDVYSFGVVLLEIIT 270
A+ G+ T+KSDV+SFG++L E+ T
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
++ R + LG+G FG V+ G T +V AIK L + G FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
V L ++ + +V EYM GSL D L RL M AA A G+ Y+ +
Sbjct: 76 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYV-E 131
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYA 247
+ N ++RDL +NIL+GE K++DFGLA+L + D + + + + APE A
Sbjct: 132 RMN--YVHRDLAAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 187
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ G+ T+KSDV+SFG++L E+ T
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 130/278 (46%), Gaps = 27/278 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGL--QGNREFLVEVLMLSLLHHPNLVNLIGY 134
+G G FG VYKG+ VA+K L+ Q + F EV +L H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
Q +V ++ SL HLH + + + + + IA A+G++YLH K+ +
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMT---GQ 251
I+RDLK +NI L E K+ DFGLA + +H ++ G+ + APE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQ 311
+ +SDVY+FG+VL E++TG+ N + + L D K ++
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK-- 243
Query: 312 YPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYLA 349
+ A C++++ + RPL ++ ++ LA
Sbjct: 244 ----------RLMAECLKKKRDERPLFPQILASIELLA 271
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 130/278 (46%), Gaps = 27/278 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGL--QGNREFLVEVLMLSLLHHPNLVNLIGY 134
+G G FG VYKG+ VA+K L+ Q + F EV +L H N++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
Q +V ++ SL HLH + + + + + IA A+G++YLH K+ +
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMT---GQ 251
I+RDLK +NI L E K+ DFGLA + +H ++ G+ + APE
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQ 311
+ +SDVY+FG+VL E++TG+ N + + L D K ++
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK-- 248
Query: 312 YPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYLA 349
+ A C++++ + RPL ++ ++ LA
Sbjct: 249 ----------RLMAECLKKKRDERPLFPQILASIELLA 276
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 130/278 (46%), Gaps = 27/278 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGL--QGNREFLVEVLMLSLLHHPNLVNLIGY 134
+G G FG VYKG+ VA+K L+ Q + F EV +L H N++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
Q +V ++ SL HLH + + + + + IA A+G++YLH K+ +
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMT---GQ 251
I+RDLK +NI L E K+ DFGLA + +H ++ G+ + APE
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQ 311
+ +SDVY+FG+VL E++TG+ N + + L D K ++
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK-- 248
Query: 312 YPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYLA 349
+ A C++++ + RPL ++ ++ LA
Sbjct: 249 ----------RLMAECLKKKRDERPLFPQILASIELLA 276
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 130/278 (46%), Gaps = 27/278 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGL--QGNREFLVEVLMLSLLHHPNLVNLIGY 134
+G G FG VYKG+ VA+K L+ Q + F EV +L H N++ +GY
Sbjct: 18 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
Q +V ++ SL HLH + + + + + IA A+G++YLH K+ +
Sbjct: 75 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 127
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMT---GQ 251
I+RDLK +NI L E K+ DFGLA + +H ++ G+ + APE
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQ 311
+ +SDVY+FG+VL E++TG+ N + + L D K ++
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK-- 245
Query: 312 YPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYLA 349
+ A C++++ + RPL ++ ++ LA
Sbjct: 246 ----------RLMAECLKKKRDERPLFPQILASIELLA 273
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 106/206 (51%), Gaps = 15/206 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGL--QGNREFLVEVLMLSLLHHPNLVNLIGY 134
+G G FG VYKG+ VA+K L+ Q + F EV +L H N++ +GY
Sbjct: 20 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
Q +V ++ SL HLH + + + + IA A+G++YLH K+ +
Sbjct: 77 STK-PQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHAKS---I 129
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM---TGQ 251
I+RDLK +NI L E K+ DFGLA + +H ++ G+ + APE +
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDN 277
+ +SDVY+FG+VL E++TG+ N
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQLPYSN 215
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 130/278 (46%), Gaps = 27/278 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGL--QGNREFLVEVLMLSLLHHPNLVNLIGY 134
+G G FG VYKG+ VA+K L+ Q + F EV +L H N++ +GY
Sbjct: 43 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
Q +V ++ SL HLH + + + + + IA A+G++YLH K+ +
Sbjct: 100 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 152
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMT---GQ 251
I+RDLK +NI L E K+ DFGLA + +H ++ G+ + APE
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 212
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQ 311
+ +SDVY+FG+VL E++TG+ N + + L D K ++
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK-- 270
Query: 312 YPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYLA 349
+ A C++++ + RPL ++ ++ LA
Sbjct: 271 ----------RLMAECLKKKRDERPLFPQILASIELLA 298
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 130/278 (46%), Gaps = 27/278 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGL--QGNREFLVEVLMLSLLHHPNLVNLIGY 134
+G G FG VYKG+ VA+K L+ Q + F EV +L H N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
Q +V ++ SL HLH + + + + + IA A+G++YLH K+ +
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMT---GQ 251
I+RDLK +NI L E K+ DFGLA + +H ++ G+ + APE
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQ 311
+ +SDVY+FG+VL E++TG+ N + + L D K ++
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK-- 271
Query: 312 YPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYLA 349
+ A C++++ + RPL ++ ++ LA
Sbjct: 272 ----------RLMAECLKKKRDERPLFPQILASIELLA 299
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
++ R + LG+G FG V+ G T +V AIK L + G FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
V L ++ + +V EYM G L D L RL M AA A G+ Y+ +
Sbjct: 76 VQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYV-E 131
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYA 247
+ N ++RDL+ +NIL+GE K++DFGLA+L + D + + + + APE A
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 187
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ G+ T+KSDV+SFG++L E+ T
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
++ R + LG+G FG V+ G T +V AIK L + G FL E ++ L H L
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 72
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
V L ++ + +V EYM GSL D L RL M +A A G+ Y+ +
Sbjct: 73 VQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDM--SAQIASGMAYV-E 128
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYA 247
+ N ++RDL+ +NIL+GE K++DFGLA+L + D + + + APE A
Sbjct: 129 RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEWTARQGAKFPIKWTAPEAA 184
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ G+ T+KSDV+SFG++L E+ T
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTT 207
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
++ R + LG+G FG V+ G T +V AIK L + G FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
V L ++ + +V EYM G L D L RL M AA A G+ Y+ +
Sbjct: 76 VQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYV-E 131
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYA 247
+ N ++RDL+ +NIL+GE K++DFGLA+L + D + + + + APE A
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 187
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ G+ T+KSDV+SFG++L E+ T
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 98/196 (50%), Gaps = 9/196 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGN--REFLVEVLMLSLLHHPNLVNLIGY 134
+G G FG V+ GRL + N +VA+K R L + +FL E +L HPN+V LIG
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSC-RETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
C Q+ +Y M L D L L + RL T +++ AA G+EYL K
Sbjct: 181 CT---QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTL 254
I+RDL N L+ E K+SDFG+++ G + APE G+ +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 255 KSDVYSFGVVLLEIIT 270
+SDV+SFG++L E +
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 128/273 (46%), Gaps = 25/273 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G G FG V+ G + ++V AIK + R G +F+ E ++ L HP LV L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKV-AIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ LV+E+M G L D+L + T + + +G+ YL + + VI+
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLR---TQRGLFAAETLLGMCLDVCEGMAYLEEAS---VIH 126
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE K+SDFG+ + + D+ ST + +PE + + KS
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 257 DVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQYPVRG 316
DV+SFGV++ E+ + K R+ E + +D ++ P L +
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLASTH---- 232
Query: 317 LYQALAVAAMCVQEQPNMRPLIADVVTALTYLA 349
+YQ + C +E+P RP + ++ L +A
Sbjct: 233 VYQ---IMNHCWKERPEDRPAFSRLLRQLAAIA 262
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 105/206 (50%), Gaps = 15/206 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGL--QGNREFLVEVLMLSLLHHPNLVNLIGY 134
+G G FG VYKG+ VA+K L+ Q + F EV +L H N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
Q +V ++ SL HLH + + + + IA A+G++YLH K+ +
Sbjct: 89 ST-APQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM---TGQ 251
I+RDLK +NI L E K+ DFGLA +H ++ G+ + APE +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDN 277
+ +SDVY+FG+VL E++TG+ N
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSN 227
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 12/200 (6%)
Query: 76 LLGEGGFGRVYKGRL----ESTNQVVAIKQLDRN-GLQGNREFLVEVLMLSLLHHPNLVN 130
+LG G FG VYKG E+ VAIK L+ G + N EF+ E L+++ + HP+LV
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L+G C + LV + MP G L +++H+ K + + AKG+ YL ++
Sbjct: 105 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHE---HKDNIGSQLLLNWCVQIAKGMMYLEERR 160
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTG 250
+++RDL N+L+ H K++DFGLA+L +K + + + A E
Sbjct: 161 ---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 217
Query: 251 QLTLKSDVYSFGVVLLEIIT 270
+ T +SDV+S+GV + E++T
Sbjct: 218 KFTHQSDVWSYGVTIWELMT 237
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 74
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 129
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P +T +S GT Y PE
Sbjct: 130 --VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----GTLDYLPPEMIEGRM 183
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGK 204
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 127/273 (46%), Gaps = 25/273 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G G FG V+ G + ++V AIK + R G +F+ E ++ L HP LV L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKV-AIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ LV+E+M G L D+L + T + + +G+ YL + VI+
Sbjct: 76 EQAPICLVFEFMEHGCLSDYLR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE K+SDFG+ + + D+ ST + +PE + + KS
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 257 DVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQYPVRG 316
DV+SFGV++ E+ + K R+ E + +D ++ P L +
Sbjct: 189 DVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLASTH---- 235
Query: 317 LYQALAVAAMCVQEQPNMRPLIADVVTALTYLA 349
+YQ + C +E+P RP + ++ L +A
Sbjct: 236 VYQ---IMNHCWRERPEDRPAFSRLLRQLAEIA 265
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 127/273 (46%), Gaps = 25/273 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G G FG V+ G + ++V AIK + R G +F+ E ++ L HP LV L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKV-AIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ LV+E+M G L D+L + T + + +G+ YL + VI+
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 124
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE K+SDFG+ + + D+ ST + +PE + + KS
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 257 DVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQYPVRG 316
DV+SFGV++ E+ + K R+ E + +D ++ P L +
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLASTH---- 230
Query: 317 LYQALAVAAMCVQEQPNMRPLIADVVTALTYLA 349
+YQ + C +E+P RP + ++ L +A
Sbjct: 231 VYQ---IMNHCWKERPEDRPAFSRLLRQLAEIA 260
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 111/203 (54%), Gaps = 18/203 (8%)
Query: 76 LLGEGGFGRVYKGRL----ESTNQVVAIKQLDRN-GLQGNREFLVEVLMLSLLHHPNLVN 130
+LG G FG VYKG E+ VAIK L+ G + N EF+ E L+++ + HP+LV
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAKGLEYLH 187
L+G C + LV + MP G L +++H+ + + L+W ++ AKG+ YL
Sbjct: 82 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLE 134
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYA 247
++ +++RDL N+L+ H K++DFGLA+L +K + + + A E
Sbjct: 135 ERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ T +SDV+S+GV + E++T
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 127/273 (46%), Gaps = 25/273 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G G FG V+ G + ++V AIK + R G +F+ E ++ L HP LV L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKV-AIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ LV+E+M G L D+L + T + + +G+ YL + VI+
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE K+SDFG+ + + D+ ST + +PE + + KS
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 257 DVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQYPVRG 316
DV+SFGV++ E+ + K R+ E + +D ++ P L +
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLASTH---- 232
Query: 317 LYQALAVAAMCVQEQPNMRPLIADVVTALTYLA 349
+YQ + C +E+P RP + ++ L +A
Sbjct: 233 VYQ---IMNHCWKERPEDRPAFSRLLRQLAEIA 262
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNL 128
++ R + LG+G FG V+ G T +V AIK L + G FL E ++ L H L
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGNMSPEAFLQEAQVMKKLRHEKL 242
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
V L ++ + +V EYM GSL D L RL M AA A G+ Y+ +
Sbjct: 243 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYV-E 298
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYA 247
+ N ++RDL+ +NIL+GE K++DFGL +L + D + + + + APE A
Sbjct: 299 RMN--YVHRDLRAANILVGENLVCKVADFGLGRL--IEDNEYTARQGAKFPIKWTAPEAA 354
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ G+ T+KSDV+SFG++L E+ T
Sbjct: 355 LYGRFTIKSDVWSFGILLTELTT 377
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 98/196 (50%), Gaps = 9/196 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGN--REFLVEVLMLSLLHHPNLVNLIGY 134
+G G FG V+ GRL + N +VA+K R L + +FL E +L HPN+V LIG
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSC-RETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
C Q+ +Y M L D L L + RL T +++ AA G+EYL K
Sbjct: 181 CT---QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTL 254
I+RDL N L+ E K+SDFG+++ G + APE G+ +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 255 KSDVYSFGVVLLEIIT 270
+SDV+SFG++L E +
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 18/213 (8%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLL 123
++F LG+G FG VY R + + ++A+K QL++ G++ + EV + S L
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHL 91
Query: 124 HHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGL 183
HPN++ L GY D + L+ EY PLG++ L L + D A L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANAL 147
Query: 184 EYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCA 243
Y H K VI+RD+K N+LLG K++DFG + P + T + GT Y
Sbjct: 148 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLP 200
Query: 244 PEYAMTGQLTLKSDVYSFGVVLLEIITGRKAID 276
PE K D++S GV+ E + G+ +
Sbjct: 201 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 27/278 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGL--QGNREFLVEVLMLSLLHHPNLVNLIGY 134
+G G FG VYKG+ VA+K L+ Q + F EV +L H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
Q +V ++ SL HLH + + + + + IA A+G++YLH K+ +
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMT---GQ 251
I+RDLK +NI L E K+ DFGLA +H ++ G+ + APE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQ 311
+ +SDVY+FG+VL E++TG+ N + + L D K ++
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK-- 243
Query: 312 YPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYLA 349
+ A C++++ + RPL ++ ++ LA
Sbjct: 244 ----------RLMAECLKKKRDERPLFPQILASIELLA 271
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 27/278 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGL--QGNREFLVEVLMLSLLHHPNLVNLIGY 134
+G G FG VYKG+ VA+K L+ Q + F EV +L H N++ +GY
Sbjct: 36 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
Q +V ++ SL HLH + + + + + IA A+G++YLH K+ +
Sbjct: 93 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 145
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMT---GQ 251
I+RDLK +NI L E K+ DFGLA +H ++ G+ + APE
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 205
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQ 311
+ +SDVY+FG+VL E++TG+ N + + L D K ++
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK-- 263
Query: 312 YPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYLA 349
+ A C++++ + RPL ++ ++ LA
Sbjct: 264 ----------RLMAECLKKKRDERPLFPQILASIELLA 291
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 27/278 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGL--QGNREFLVEVLMLSLLHHPNLVNLIGY 134
+G G FG VYKG+ VA+K L+ Q + F EV +L H N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
Q +V ++ SL HLH + + + + + IA A+G++YLH K+ +
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMT---GQ 251
I+RDLK +NI L E K+ DFGLA +H ++ G+ + APE
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQ 311
+ +SDVY+FG+VL E++TG+ N + + L D K ++
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK-- 271
Query: 312 YPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYLA 349
+ A C++++ + RPL ++ ++ LA
Sbjct: 272 ----------RLMAECLKKKRDERPLFPQILASIELLA 299
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 105/206 (50%), Gaps = 15/206 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGL--QGNREFLVEVLMLSLLHHPNLVNLIGY 134
+G G FG VYKG+ VA+K L+ Q + F EV +L H N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
Q +V ++ SL HLH + + + + IA A+G++YLH K+ +
Sbjct: 89 STK-PQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM---TGQ 251
I+RDLK +NI L E K+ DFGLA +H ++ G+ + APE +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDN 277
+ +SDVY+FG+VL E++TG+ N
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSN 227
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 73
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 128
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P +T + GT Y PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC----GTLDYLPPEMIEGRM 182
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGK 203
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 90
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 91 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 145
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P + T + GT Y PE
Sbjct: 146 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRM 199
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGK 220
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 78
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 133
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P + T + GT Y PE
Sbjct: 134 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEXIEGRX 187
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGK 208
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 99/198 (50%), Gaps = 11/198 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G G FG VYKG+ V +K +D Q + F EV +L H N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQF-QAFRNEVAVLRKTRHVNILLFMGYMT 102
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
D +V ++ SL HLH + + + IA A+G++YLH K +I+
Sbjct: 103 K-DNLAIVTQWCEGSSLYKHLH---VQETKFQMFQLIDIARQTAQGMDYLHAKN---IIH 155
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM---TGQLT 253
RD+K +NI L EG K+ DFGLA + + + G+ + APE +
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
Query: 254 LKSDVYSFGVVLLEIITG 271
+SDVYS+G+VL E++TG
Sbjct: 216 FQSDVYSYGIVLYELMTG 233
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 74
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 129
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P +T + GT Y PE
Sbjct: 130 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRM 183
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGK 204
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 108/238 (45%), Gaps = 19/238 (7%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRN---GLQGNREFLVEVLMLSLLHH 125
++F+ LG G FGRV+ R + A+K L + L+ E LMLS++ H
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 65
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P ++ + G D Q ++ +Y+ G L L +R AA LEY
Sbjct: 66 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEY 121
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +IYRDLK NILL + H K++DFG AK P V+ + GT Y APE
Sbjct: 122 LHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVP-----DVTYXLCGTPDYIAPE 173
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITGRKAI--DNTRAAGEHNLVAWAR--PLFKDRRK 299
T D +SFG+++ E++ G NT E L A R P F + K
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVK 231
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 103/214 (48%), Gaps = 21/214 (9%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
+LG+G FG+ K T +V+ +K+L R + R FL EV ++ L HPN++ IG
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
+ + EY+ G+L + + + W+ R+ A A G+ YLH +I
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSMN---II 130
Query: 196 YRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVS-------------TRVMGTYGYC 242
+RDL N L+ E + ++DFGLA+L V +KT V+G +
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLM-VDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 243 APEYAMTGQLTLKSDVYSFGVVLLEIITGRKAID 276
APE K DV+SFG+VL EII GR D
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 78
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 133
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P + T + GT Y PE
Sbjct: 134 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRM 187
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGK 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 73
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 128
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P + T + GT Y PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRM 182
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGK 203
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 76
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 131
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P + T + GT Y PE
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRM 185
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGK 206
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 108/213 (50%), Gaps = 26/213 (12%)
Query: 76 LLGEGGFGRVYKGRL--ESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLL-HHPNLVNL 131
++GEG FG+V K R+ + AIK++ + + R+F E+ +L L HHPN++NL
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHD---LPPD---------KKRLDWTTRMRIAAGA 179
+G C L EY P G+L D L L D L + AA
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 180 AKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY 239
A+G++YL K I+RDL NIL+GE Y K++DFGL++ G + +V + MG
Sbjct: 152 ARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRL 203
Query: 240 --GYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ A E T SDV+S+GV+L EI++
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 78
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 133
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P +T + GT Y PE
Sbjct: 134 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRM 187
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGK 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 73
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 128
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P +T + GT Y PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRM 182
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGK 203
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 73
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 128
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P +T + GT Y PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRM 182
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGK 203
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 108/213 (50%), Gaps = 26/213 (12%)
Query: 76 LLGEGGFGRVYKGRL--ESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLL-HHPNLVNL 131
++GEG FG+V K R+ + AIK++ + + R+F E+ +L L HHPN++NL
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHD---LPPD---------KKRLDWTTRMRIAAGA 179
+G C L EY P G+L D L L D L + AA
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 180 AKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY 239
A+G++YL K I+RDL NIL+GE Y K++DFGL++ G + +V + MG
Sbjct: 142 ARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRL 193
Query: 240 --GYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ A E T SDV+S+GV+L EI++
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 126/273 (46%), Gaps = 25/273 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G G FG V+ G + ++V AIK + R G +F+ E ++ L HP LV L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKV-AIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ LV E+M G L D+L + T + + +G+ YL + VI+
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 127
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE K+SDFG+ + + D+ ST + +PE + + KS
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 257 DVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQYPVRG 316
DV+SFGV++ E+ + K R+ E + +D ++ P L +
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLASTH---- 233
Query: 317 LYQALAVAAMCVQEQPNMRPLIADVVTALTYLA 349
+YQ + C +E+P RP + ++ L +A
Sbjct: 234 VYQ---IMNHCWRERPEDRPAFSRLLRQLAEIA 263
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLL 123
++F LG+G FG VY R + + ++A+K QL++ G++ + EV + S L
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHL 65
Query: 124 HHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGL 183
HPN++ L GY D + L+ EY PLG++ L L + D A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANAL 121
Query: 184 EYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCA 243
Y H K VI+RD+K N+LLG K++DFG + P +T + GT Y
Sbjct: 122 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC----GTLDYLP 174
Query: 244 PEYAMTGQLTLKSDVYSFGVVLLEIITGR 272
PE K D++S GV+ E + G+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 72
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 73 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 127
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P + T + GT Y PE
Sbjct: 128 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRM 181
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGK 202
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 76
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 131
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P + T + GT Y PE
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRM 185
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGK 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLL 123
++F LG+G FG VY R + + ++A+K QL++ G++ + EV + S L
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHL 69
Query: 124 HHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGL 183
HPN++ L GY D + L+ EY PLG++ L L + D A L
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANAL 125
Query: 184 EYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCA 243
Y H K VI+RD+K N+LLG K++DFG + P + T + GT Y
Sbjct: 126 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLP 178
Query: 244 PEYAMTGQLTLKSDVYSFGVVLLEIITGR 272
PE K D++S GV+ E + G+
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 127/273 (46%), Gaps = 25/273 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G G FG V+ G + ++V AIK + + G +F+ E ++ L HP LV L G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKV-AIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ LV+E+M G L D+L + T + + +G+ YL + VI+
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 146
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+GE K+SDFG+ + + D+ ST + +PE + + KS
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 257 DVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQYPVRG 316
DV+SFGV++ E+ + K R+ E + +D ++ P L +
Sbjct: 206 DVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLASTH---- 252
Query: 317 LYQALAVAAMCVQEQPNMRPLIADVVTALTYLA 349
+YQ + C +E+P RP + ++ L +A
Sbjct: 253 VYQ---IMNHCWKERPEDRPAFSRLLRQLAEIA 282
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 97/205 (47%), Gaps = 18/205 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 99
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 154
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P + + GT Y PE
Sbjct: 155 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRM 208
Query: 252 LTLKSDVYSFGVVLLEIITGRKAID 276
K D++S GV+ E + G+ +
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE--HQLRREVEIQSHLRHPNILRL 77
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L R D A L Y H K
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKL----SRFDEQRTATYITELANALSYCHSKR- 132
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P + T + GT Y PE
Sbjct: 133 --VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRM 186
Query: 252 LTLKSDVYSFGVVLLEIITG 271
K D++S GV+ E + G
Sbjct: 187 HDEKVDLWSLGVLCYEFLVG 206
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 115/221 (52%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L++ + MP G L D++ + + + L+W ++ AK
Sbjct: 80 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 132
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 133 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 189
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 230
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 115/221 (52%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L++ + MP G L D++ + + + L+W ++ AK
Sbjct: 76 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 115/221 (52%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L++ + MP G L D++ + + + L+W ++ AK
Sbjct: 77 NPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AK 129
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 130 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 227
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 75
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 76 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 130
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K+++FG + P + T + GT Y PE
Sbjct: 131 --VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRM 184
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGK 205
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 115/221 (52%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L++ + MP G L D++ + + + L+W ++ AK
Sbjct: 77 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 129
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 130 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 227
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 115/221 (52%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L++ + MP G L D++ + + + L+W ++ AK
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 228
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 75
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 76 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 130
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P + + GT Y PE
Sbjct: 131 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRM 184
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGK 205
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 115/221 (52%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L++ + MP G L D++ + + + L+W ++ AK
Sbjct: 79 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 229
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L+ + MP G L D++ + + + L+W ++ AK
Sbjct: 86 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 138
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 139 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 195
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 236
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L+ + MP G L D++ + + + L+W ++ AK
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L+ + MP G L D++ + + + L+W ++ AK
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 229
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 108/213 (50%), Gaps = 26/213 (12%)
Query: 76 LLGEGGFGRVYKGRL--ESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLL-HHPNLVNL 131
++GEG FG+V K R+ + AIK++ + + R+F E+ +L L HHPN++NL
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHD---LPPD---------KKRLDWTTRMRIAAGA 179
+G C L EY P G+L D L L D L + AA
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 180 AKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY 239
A+G++YL K I+R+L NIL+GE Y K++DFGL++ G + +V + MG
Sbjct: 149 ARGMDYLSQKQ---FIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRL 200
Query: 240 --GYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ A E T SDV+S+GV+L EI++
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L+ + MP G L D++ + + + L+W ++ AK
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R +++ ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 73
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 74 YGYFHDSTRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKK- 128
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P + + GT Y PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRM 182
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGK 203
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L+ + MP G L D++ + + + L+W ++ AK
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L+ + MP G L D++ + + + L+W ++ AK
Sbjct: 82 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 134
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 135 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 191
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 232
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L+ + MP G L D++ + + + L+W ++ AK
Sbjct: 78 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 228
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L+ + MP G L D++ + + + L+W ++ AK
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 229
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L+ + MP G L D++ + + + L+W ++ AK
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 233
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L+ + MP G L D++ + + + L+W ++ AK
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 229
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 76
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 131
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K+++FG + P + T + GT Y PE
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRM 185
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGK 206
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 70
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 71 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 125
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P + T + GT Y PE
Sbjct: 126 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRM 179
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGK 200
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L+ + MP G L D++ + + + L+W ++ AK
Sbjct: 101 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 153
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 154 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 210
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 251
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 74
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 129
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P + + GT Y PE
Sbjct: 130 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DTLCGTLDYLPPEMIEGRM 183
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGK 204
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 76
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 131
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P + + GT Y PE
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRM 185
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGK 206
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L+ + MP G L D++ + + + L+W ++ AK
Sbjct: 70 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 122
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 123 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 179
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 220
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V+ G ++ +V A+K L + G + FL E ++ L H LV L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKV-AVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ EYM GSL D L K L + +A A+G+ Y+ K I+
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERKN---YIH 133
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYAMTGQLTL 254
RDL+ +N+L+ E K++DFGLA+ V + + R + + APE G T+
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLAR---VIEDNEYTAREGAKFPIKWTAPEAINFGCFTI 190
Query: 255 KSDVYSFGVVLLEIIT 270
KSDV+SFG++L EI+T
Sbjct: 191 KSDVWSFGILLYEIVT 206
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 100/195 (51%), Gaps = 11/195 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V+ G +V A+K L + G FL E ++ L H LV L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ EYM GSL D L P +L + +AA A+G+ ++ ++ I+
Sbjct: 85 Q-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 138
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYAMTGQLTLK 255
RDL+ +NIL+ + K++DFGLA+L + D + + + APE G T+K
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 256 SDVYSFGVVLLEIIT 270
SDV+SFG++L EI+T
Sbjct: 197 SDVWSFGILLTEIVT 211
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 16/203 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LGEG FG+V Y ++T + VA+K L +G + E+ +L L+H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 132 IGYCAD--GDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
G C + G+ L+ E++P GSL+++L P +K +++ +++ A KG++YL +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDK--THVSTRVMGTYGYCAPEYA 247
++RDL N+L+ + K+ DFGL K + T R + Y APE
Sbjct: 146 Q---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 201
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
M + + SDV+SFGV L E++T
Sbjct: 202 MQSKFYIASDVWSFGVTLHELLT 224
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 100/195 (51%), Gaps = 11/195 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V+ G +V A+K L + G FL E ++ L H LV L
Sbjct: 26 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 83
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ EYM GSL D L P +L + +AA A+G+ ++ ++ I+
Sbjct: 84 Q-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 137
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYAMTGQLTLK 255
RDL+ +NIL+ + K++DFGLA+L + D + + + APE G T+K
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 195
Query: 256 SDVYSFGVVLLEIIT 270
SDV+SFG++L EI+T
Sbjct: 196 SDVWSFGILLTEIVT 210
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 78
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY P G + L L + D A L Y H K
Sbjct: 79 YGYFHDATRVYLILEYAPRGEVYKELQKL----SKFDEQRTATYITELANALSYCHSKR- 133
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P + T + GT Y PE
Sbjct: 134 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRM 187
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGK 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 73
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 128
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P + + GT Y PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRM 182
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGK 203
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLL 123
++F LG+G FG VY R + + ++A+K QL++ G++ + EV + S L
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHL 65
Query: 124 HHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGL 183
HPN++ L GY D + L+ EY PLG++ L L + D A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANAL 121
Query: 184 EYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCA 243
Y H K VI+RD+K N+LLG K++DFG + P + + GT Y
Sbjct: 122 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLP 174
Query: 244 PEYAMTGQLTLKSDVYSFGVVLLEIITGR 272
PE K D++S GV+ E + G+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 76
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L + D A L Y H K
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR- 131
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P + + GT Y PE
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRM 185
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGK 206
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 100/195 (51%), Gaps = 11/195 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V+ G +V A+K L + G FL E ++ L H LV L
Sbjct: 31 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 88
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ EYM GSL D L P +L + +AA A+G+ ++ ++ I+
Sbjct: 89 Q-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 142
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYAMTGQLTLK 255
RDL+ +NIL+ + K++DFGLA+L + D + + + APE G T+K
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 200
Query: 256 SDVYSFGVVLLEIIT 270
SDV+SFG++L EI+T
Sbjct: 201 SDVWSFGILLTEIVT 215
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 16/203 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LGEG FG+V Y ++T + VA+K L +G + E+ +L L+H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 132 IGYCAD--GDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
G C + G+ L+ E++P GSL+++L P +K +++ +++ A KG++YL +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDK--THVSTRVMGTYGYCAPEYA 247
++RDL N+L+ + K+ DFGL K + T R + Y APE
Sbjct: 134 Q---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 189
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
M + + SDV+SFGV L E++T
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLT 212
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 100/195 (51%), Gaps = 11/195 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V+ G +V A+K L + G FL E ++ L H LV L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ EYM GSL D L P +L + +AA A+G+ ++ ++ I+
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYAMTGQLTLK 255
RDL+ +NIL+ + K++DFGLA+L + D + + + APE G T+K
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 256 SDVYSFGVVLLEIIT 270
SDV+SFG++L EI+T
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 14/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNLVNLIGYC 135
+G+G G VY +T Q VAI+Q++ Q +E ++ E+L++ +PN+VN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
GD+ +V EY+ GSL D + + D+ ++ R + A LE+LH VI
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA-----LEFLHSNQ---VI 138
Query: 196 YRDLKCSNILLGEGYHPKLSDFGL-AKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTL 254
+RD+K NILLG KL+DFG A++ P K + ++GT + APE
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAPEVVTRKAYGP 195
Query: 255 KSDVYSFGVVLLEIITGR 272
K D++S G++ +E+I G
Sbjct: 196 KVDIWSLGIMAIEMIEGE 213
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 107/198 (54%), Gaps = 14/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNLVNLIGYC 135
+G+G G VY +T Q VAI+Q++ Q +E ++ E+L++ +PN+VN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
GD+ +V EY+ GSL D + + D+ ++ R + A LE+LH VI
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA-----LEFLHSNQ---VI 138
Query: 196 YRDLKCSNILLGEGYHPKLSDFGL-AKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTL 254
+RD+K NILLG KL+DFG A++ P +++ ST V GT + APE
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMV-GTPYWMAPEVVTRKAYGP 195
Query: 255 KSDVYSFGVVLLEIITGR 272
K D++S G++ +E+I G
Sbjct: 196 KVDIWSLGIMAIEMIEGE 213
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLL 123
++F LG+G FG VY R + + ++A+K QL++ G++ + EV + S L
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHL 68
Query: 124 HHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGL 183
HPN++ L GY D + L+ EY PLG++ L L + D A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANAL 124
Query: 184 EYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCA 243
Y H K VI+RD+K N+LLG K++DFG + P + + GT Y
Sbjct: 125 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLP 177
Query: 244 PEYAMTGQLTLKSDVYSFGVVLLEIITGR 272
PE K D++S GV+ E + G+
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V+ G +V A+K L + G FL E ++ L H LV L
Sbjct: 29 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 86
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ EYM GSL D L P +L + +AA A+G+ ++ ++ I+
Sbjct: 87 Q-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 140
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYAMTGQLTL 254
RDL+ +NIL+ + K++DFGLA+L + + R + + APE G T+
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTI 197
Query: 255 KSDVYSFGVVLLEIIT 270
KSDV+SFG++L EI+T
Sbjct: 198 KSDVWSFGILLTEIVT 213
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 100/220 (45%), Gaps = 29/220 (13%)
Query: 77 LGEGGFGRVYKGRLE-----STNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLHHPNLVN 130
+GEG FGRV++ R +VA+K L + +F E +++ +PN+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDK----KRLDWTTRMR------------ 174
L+G CA G L++EYM G L + L + P D +TR R
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 175 ----IAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH 230
IA A G+ YL ++ ++RDL N L+GE K++DFGL++ D
Sbjct: 175 EQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 231 VSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ PE + T +SDV+++GVVL EI +
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V+ G +V A+K L + G FL E ++ L H LV L
Sbjct: 30 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 87
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ EYM GSL D L P +L + +AA A+G+ ++ ++ I+
Sbjct: 88 Q-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 141
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYAMTGQLTL 254
RDL+ +NIL+ + K++DFGLA+L + + R + + APE G T+
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTI 198
Query: 255 KSDVYSFGVVLLEIIT 270
KSDV+SFG++L EI+T
Sbjct: 199 KSDVWSFGILLTEIVT 214
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V+ G +V A+K L + G FL E ++ L H LV L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ EYM GSL D L P +L + +AA A+G+ ++ ++ I+
Sbjct: 85 Q-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 138
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYAMTGQLTL 254
RDL+ +NIL+ + K++DFGLA+L + + R + + APE G T+
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTI 195
Query: 255 KSDVYSFGVVLLEIIT 270
KSDV+SFG++L EI+T
Sbjct: 196 KSDVWSFGILLTEIVT 211
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 14/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNLVNLIGYC 135
+G+G G VY +T Q VAI+Q++ Q +E ++ E+L++ +PN+VN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
GD+ +V EY+ GSL D + + D+ ++ R + A LE+LH VI
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA-----LEFLHSNQ---VI 138
Query: 196 YRDLKCSNILLGEGYHPKLSDFGL-AKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTL 254
+RD+K NILLG KL+DFG A++ P K + ++GT + APE
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRKAYGP 195
Query: 255 KSDVYSFGVVLLEIITGR 272
K D++S G++ +E+I G
Sbjct: 196 KVDIWSLGIMAIEMIEGE 213
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 100/195 (51%), Gaps = 11/195 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V+ G +V A+K L + G FL E ++ L H LV L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 73
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ EYM GSL D L P +L + +AA A+G+ ++ ++ I+
Sbjct: 74 Q-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 127
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYAMTGQLTLK 255
RDL+ +NIL+ + K++DFGLA+L + D + + + APE G T+K
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 256 SDVYSFGVVLLEIIT 270
SDV+SFG++L EI+T
Sbjct: 186 SDVWSFGILLTEIVT 200
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V+ G +V A+K L + G FL E ++ L H LV L
Sbjct: 23 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 80
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ EYM GSL D L P +L + +AA A+G+ ++ ++ I+
Sbjct: 81 Q-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 134
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYAMTGQLTL 254
RDL+ +NIL+ + K++DFGLA+L + + R + + APE G T+
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTI 191
Query: 255 KSDVYSFGVVLLEIIT 270
KSDV+SFG++L EI+T
Sbjct: 192 KSDVWSFGILLTEIVT 207
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 14/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNLVNLIGYC 135
+G+G G VY +T Q VAI+Q++ Q +E ++ E+L++ +PN+VN +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
GD+ +V EY+ GSL D + + D+ ++ R + A LE+LH VI
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA-----LEFLHSNQ---VI 139
Query: 196 YRDLKCSNILLGEGYHPKLSDFGL-AKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTL 254
+RD+K NILLG KL+DFG A++ P K + ++GT + APE
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRKAYGP 196
Query: 255 KSDVYSFGVVLLEIITGR 272
K D++S G++ +E+I G
Sbjct: 197 KVDIWSLGIMAIEMIEGE 214
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V+ G +V A+K L + G FL E ++ L H LV L
Sbjct: 22 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 79
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ EYM GSL D L P +L + +AA A+G+ ++ ++ I+
Sbjct: 80 Q-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 133
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYAMTGQLTL 254
RDL+ +NIL+ + K++DFGLA+L + + R + + APE G T+
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTI 190
Query: 255 KSDVYSFGVVLLEIIT 270
KSDV+SFG++L EI+T
Sbjct: 191 KSDVWSFGILLTEIVT 206
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE--HQLRREVEIQSHLRHPNILRL 77
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY PLG++ L L R D A L Y H K
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKL----SRFDEQRTATYITELANALSYCHSKR- 132
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P + + GT Y PE
Sbjct: 133 --VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----DTLCGTLDYLPPEMIEGRM 186
Query: 252 LTLKSDVYSFGVVLLEIITG 271
K D++S GV+ E + G
Sbjct: 187 HDEKVDLWSLGVLCYEFLVG 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V+ G +V A+K L + G FL E ++ L H LV L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ EYM GSL D L P +L + +AA A+G+ ++ ++ I+
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYAMTGQLTL 254
RDL+ +NIL+ + K++DFGLA+L + + R + + APE G T+
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 255 KSDVYSFGVVLLEIIT 270
KSDV+SFG++L EI+T
Sbjct: 190 KSDVWSFGILLTEIVT 205
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V+ G +V A+K L + G FL E ++ L H LV L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ EYM GSL D L P +L + +AA A+G+ ++ ++ I+
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYAMTGQLTL 254
RDL+ +NIL+ + K++DFGLA+L + + R + + APE G T+
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 255 KSDVYSFGVVLLEIIT 270
KSDV+SFG++L EI+T
Sbjct: 190 KSDVWSFGILLTEIVT 205
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L+ + MP G L D++ + + + L+W ++ A+
Sbjct: 73 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AE 125
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 126 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 182
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 223
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 108/210 (51%), Gaps = 20/210 (9%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
R +LG G FG V+KG ES V IK + D++G Q + +L + L
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 91
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHD----LPPDKKRLDWTTRMRIAAGAA 180
H ++V L+G C G LV +Y+PLGSL DH+ L P + L+W ++ A
Sbjct: 92 HAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGP-QLLLNWGVQI------A 143
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
KG+ YL + +++R+L N+LL +++DFG+A L P DK + +
Sbjct: 144 KGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 200
Query: 241 YCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ A E G+ T +SDV+S+GV + E++T
Sbjct: 201 WMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 115/230 (50%), Gaps = 27/230 (11%)
Query: 50 GSDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DR 104
G+ + A F EL R +LG G FG V+KG ES V IK + D+
Sbjct: 1 GAMKVLARIFKETEL-------RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK 53
Query: 105 NGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHD----L 160
+G Q + +L + L H ++V L+G C G LV +Y+PLGSL DH+ L
Sbjct: 54 SGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGAL 112
Query: 161 PPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLA 220
P + L+W ++ AKG+ YL + +++R+L N+LL +++DFG+A
Sbjct: 113 GP-QLLLNWGVQI------AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVA 162
Query: 221 KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
L P DK + + + A E G+ T +SDV+S+GV + E++T
Sbjct: 163 DLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +L G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L++ + MP G L D++ + + + L+W ++ AK
Sbjct: 83 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 233
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 124/269 (46%), Gaps = 32/269 (11%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNLVNLIGYC 135
+G+G FG V+KG T +VVAIK +D + E + E+ +LS P + G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
+ ++ EY+ GS D L P LD T I KGL+YLH + I
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLHSEKK---I 126
Query: 196 YRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLK 255
+RD+K +N+LL E KL+DFG+A G + D +GT + APE K
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 184
Query: 256 SDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQY--P 313
+D++S G+ AI+ R H+ + + LF + PTL+G Y P
Sbjct: 185 ADIWSLGIT---------AIELARGEPPHSELHPMKVLF----LIPKNNPPTLEGNYSKP 231
Query: 314 VRGLYQALAVAAMCVQEQPNMRPLIADVV 342
++ +A C+ ++P+ RP +++
Sbjct: 232 LKEFVEA------CLNKEPSFRPTAKELL 254
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L++ + MP G L D++ + + + L+W ++ AK
Sbjct: 80 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 132
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFG AKL +K + + +
Sbjct: 133 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 189
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 230
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 107/211 (50%), Gaps = 13/211 (6%)
Query: 76 LLGEGGFGRVYKGRL----ESTNQVVAIKQLDRN-GLQGNREFLVEVLMLSLLHHPNLVN 130
+LG G FG VYKG E+ VAIK L N + N+E L E +++ + P +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L+G C +L V + MP G L DH+ + ++ RL + AKG+ YL D
Sbjct: 84 LLGICLTSTVQL-VTQLMPYGCLLDHVRE---NRGRLGSQDLLNWCMQIAKGMSYLEDVR 139
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTG 250
+++RDL N+L+ H K++DFGLA+L + + + + + A E +
Sbjct: 140 ---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRR 196
Query: 251 QLTLKSDVYSFGVVLLEIIT-GRKAIDNTRA 280
+ T +SDV+S+GV + E++T G K D A
Sbjct: 197 RFTHQSDVWSYGVTVWELMTFGAKPYDGIPA 227
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 124/269 (46%), Gaps = 32/269 (11%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNLVNLIGYC 135
+G+G FG V+KG T +VVAIK +D + E + E+ +LS P + G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
+ ++ EY+ GS D L P LD T I KGL+YLH + I
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLHSEKK---I 126
Query: 196 YRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLK 255
+RD+K +N+LL E KL+DFG+A G + D +GT + APE K
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 184
Query: 256 SDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQY--P 313
+D++S G+ AI+ R H+ + + LF + PTL+G Y P
Sbjct: 185 ADIWSLGIT---------AIELARGEPPHSELHPMKVLF----LIPKNNPPTLEGNYSKP 231
Query: 314 VRGLYQALAVAAMCVQEQPNMRPLIADVV 342
++ +A C+ ++P+ RP +++
Sbjct: 232 LKEFVEA------CLNKEPSFRPTAKELL 254
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L++ + MP G L D++ + + + L+W ++ AK
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFG AKL +K + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 228
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +L G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L+ + MP G L D++ + + + L+W ++ AK
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 32/269 (11%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
+G+G FG V+KG T +VVAIK +D + E+ +LS P + G
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
+ ++ EY+ GS D L P LD T I KGL+YLH + I
Sbjct: 90 LKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLHSEKK---I 141
Query: 196 YRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLK 255
+RD+K +N+LL E KL+DFG+A G + D +GT + APE K
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 199
Query: 256 SDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQY--P 313
+D++S G+ AI+ R H+ + + LF + PTL+G Y P
Sbjct: 200 ADIWSLGIT---------AIELARGEPPHSELHPMKVLF----LIPKNNPPTLEGNYSKP 246
Query: 314 VRGLYQALAVAAMCVQEQPNMRPLIADVV 342
++ +A C+ ++P+ RP +++
Sbjct: 247 LKEFVEA------CLNKEPSFRPTAKELL 269
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + + ++A+K QL++ G++ + EV + S L HPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRL 78
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
GY D + L+ EY P G + L L + D A L Y H K
Sbjct: 79 YGYFHDATRVYLILEYAPRGEVYKELQKL----SKFDEQRTATYITELANALSYCHSKR- 133
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RD+K N+LLG K++DFG + P + + GT Y PE
Sbjct: 134 --VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTLDYLPPEMIEGRM 187
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
K D++S GV+ E + G+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGK 208
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L++ + MP G L D++ + + + L+W ++ AK
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFG AKL +K + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 228
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +L G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L+ + MP G L D++ + + + L+W ++ AK
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 233
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAI +L + + N+E L E +++ +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L+ + MP G L D++ + + + L+W ++ AK
Sbjct: 110 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 162
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFGLAKL +K + + +
Sbjct: 163 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 219
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 220 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 260
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 121/263 (46%), Gaps = 32/263 (12%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNLVNLIGYC 135
+G+G FG V+KG T +VVAIK +D + E + E+ +LS P + G
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
+ ++ EY+ GS D L P LD T I KGL+YLH + I
Sbjct: 95 LKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLHSEKK---I 146
Query: 196 YRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLK 255
+RD+K +N+LL E KL+DFG+A G + D +GT + APE K
Sbjct: 147 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 204
Query: 256 SDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQY--P 313
+D++S G+ AI+ R H+ + + LF + PTL+G Y P
Sbjct: 205 ADIWSLGIT---------AIELARGEPPHSELHPMKVLF----LIPKNNPPTLEGNYSKP 251
Query: 314 VRGLYQALAVAAMCVQEQPNMRP 336
++ +A C+ ++P+ RP
Sbjct: 252 LKEFVEA------CLNKEPSFRP 268
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G VYK + T Q+VAIKQ+ + LQ E + E+ ++ P++V G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ---EIIKEISIMQQCDSPHVVKYYGSY 93
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
+V EY GS+ D + K L I KGLEYLH I
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIR---LRNKTLTEDEIATILQSTLKGLEYLHFMRK---I 147
Query: 196 YRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLK 255
+RD+K NILL H KL+DFG+A G + D V+GT + APE
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCV 205
Query: 256 SDVYSFGVVLLEIITGR 272
+D++S G+ +E+ G+
Sbjct: 206 ADIWSLGITAIEMAEGK 222
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L+ + MP G L D++ + + + L+W ++ AK
Sbjct: 78 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFG AKL +K + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 228
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L+ + MP G L D++ + + + L+W ++ AK
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFG AKL +K + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 185
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 117/269 (43%), Gaps = 32/269 (11%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
+G+G FG VYKG T +VVAIK +D + E+ +LS P + G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
+ ++ EY+ GS D L P L+ T I KGL+YLH + I
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLLKPGP-----LEETYIATILREILKGLDYLHSERK---I 138
Query: 196 YRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLK 255
+RD+K +N+LL E KL+DFG+A G + D +GT + APE K
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFK 196
Query: 256 SDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQY--P 313
+D++S G+ +E+ G + L+ P PTL+GQ+ P
Sbjct: 197 ADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-------------PTLEGQHSKP 243
Query: 314 VRGLYQALAVAAMCVQEQPNMRPLIADVV 342
+ +A C+ + P RP +++
Sbjct: 244 FKEFVEA------CLNKDPRFRPTAKELL 266
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRL----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLH 124
F+ +LG G FG VYKG E VAIK+L + + N+E L E +++ +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD---KKRLDWTTRMRIAAGAAK 181
+P++ L+G C +L+ + MP G L D++ + + + L+W ++ AK
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
G+ YL D+ +++RDL N+L+ H K++DFG AKL +K + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 192
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT-GRKAIDNTRAA 281
A E + T +SDV+S+GV + E++T G K D A+
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 233
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 107/221 (48%), Gaps = 14/221 (6%)
Query: 55 AAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLE--STNQV-VAIKQLDRNGLQGNR 111
H F +EL A N D ++G G FG V GRL+ S ++ VAIK L + R
Sbjct: 34 TVHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 112 -EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWT 170
+FL E ++ HPN++ L G ++V EYM GSL+ L +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 171 TRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH 230
+R G A G++YL D ++RDL NIL+ K+SDFGLA++ +
Sbjct: 151 GMLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAA 204
Query: 231 VSTRVMGT-YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+TR + +PE + T SDV+S+G+VL E+++
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 134/314 (42%), Gaps = 53/314 (16%)
Query: 69 KNFRADCLLGEGGFGRV-------YKGRLESTNQVVAIKQLDRNGLQGN-REFLVEVLML 120
KN LGEG FG+V KGR T VA+K L N R+ L E +L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTT--VAVKMLKENASPSELRDLLSEFNVL 80
Query: 121 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLP------------------- 161
++HP+++ L G C+ LL+ EY GSL L +
Sbjct: 81 KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 162 -PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLA 220
PD++ L + A ++G++YL A +++RDL NIL+ EG K+SDFGL+
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 221 KLGPVGDKTHVSTRVMGTY--GYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNT 278
+ V ++ R G + A E T +SDV+SFGV+L EI+T
Sbjct: 198 R--DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT-------- 247
Query: 279 RAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLI 338
G LF + +M P + R + Q C +++P+ RP+
Sbjct: 248 -LGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQ-------CWKQEPDKRPVF 299
Query: 339 ADVVTALTYLACQK 352
AD+ L + ++
Sbjct: 300 ADISKDLEKMMVKR 313
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 101/195 (51%), Gaps = 11/195 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V+ G +V A+K L + + + FL E ++ L H LV L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVT 74
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ EYM GSL D L P +L + +AA A+G+ ++ ++ I+
Sbjct: 75 Q-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 128
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAPEYAMTGQLTLK 255
R+L+ +NIL+ + K++DFGLA+L + D + + + APE G T+K
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 256 SDVYSFGVVLLEIIT 270
SDV+SFG++L EI+T
Sbjct: 187 SDVWSFGILLTEIVT 201
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 134/314 (42%), Gaps = 53/314 (16%)
Query: 69 KNFRADCLLGEGGFGRV-------YKGRLESTNQVVAIKQLDRNGLQGN-REFLVEVLML 120
KN LGEG FG+V KGR T VA+K L N R+ L E +L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTT--VAVKMLKENASPSELRDLLSEFNVL 80
Query: 121 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLP------------------- 161
++HP+++ L G C+ LL+ EY GSL L +
Sbjct: 81 KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 162 -PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLA 220
PD++ L + A ++G++YL A +++RDL NIL+ EG K+SDFGL+
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 221 KLGPVGDKTHVSTRVMGTY--GYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNT 278
+ V ++ R G + A E T +SDV+SFGV+L EI+T
Sbjct: 198 R--DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT-------- 247
Query: 279 RAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLI 338
G LF + +M P + R + Q C +++P+ RP+
Sbjct: 248 -LGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQ-------CWKQEPDKRPVF 299
Query: 339 ADVVTALTYLACQK 352
AD+ L + ++
Sbjct: 300 ADISKDLEKMMVKR 313
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 107/198 (54%), Gaps = 14/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNLVNLIGYC 135
+G+G G VY +T Q VAI+Q++ Q +E ++ E+L++ +PN+VN +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
GD+ +V EY+ GSL D + + D+ ++ R + A LE+LH VI
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA-----LEFLHSNQ---VI 139
Query: 196 YRDLKCSNILLGEGYHPKLSDFGL-AKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTL 254
+R++K NILLG KL+DFG A++ P +++ ST V GT + APE
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMV-GTPYWMAPEVVTRKAYGP 196
Query: 255 KSDVYSFGVVLLEIITGR 272
K D++S G++ +E+I G
Sbjct: 197 KVDIWSLGIMAIEMIEGE 214
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 134/314 (42%), Gaps = 53/314 (16%)
Query: 69 KNFRADCLLGEGGFGRV-------YKGRLESTNQVVAIKQLDRNGLQGN-REFLVEVLML 120
KN LGEG FG+V KGR T VA+K L N R+ L E +L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTT--VAVKMLKENASPSELRDLLSEFNVL 80
Query: 121 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLP------------------- 161
++HP+++ L G C+ LL+ EY GSL L +
Sbjct: 81 KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 162 -PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLA 220
PD++ L + A ++G++YL A +++RDL NIL+ EG K+SDFGL+
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 221 KLGPVGDKTHVSTRVMGTY--GYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNT 278
+ V ++ R G + A E T +SDV+SFGV+L EI+T
Sbjct: 198 R--DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT-------- 247
Query: 279 RAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLI 338
G LF + +M P + R + Q C +++P+ RP+
Sbjct: 248 -LGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQ-------CWKQEPDKRPVF 299
Query: 339 ADVVTALTYLACQK 352
AD+ L + ++
Sbjct: 300 ADISKDLEKMMVKR 313
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 107/220 (48%), Gaps = 14/220 (6%)
Query: 56 AHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLE--STNQV-VAIKQLDRNGLQGNR- 111
H F +EL A N D ++G G FG V GRL+ S ++ VAIK L + R
Sbjct: 6 VHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 62
Query: 112 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTT 171
+FL E ++ HPN++ L G ++V EYM GSL+ L +
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 122
Query: 172 RMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHV 231
+R G A G++YL D ++RDL NIL+ K+SDFGL+++ +
Sbjct: 123 MLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 176
Query: 232 STRVMGT-YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+TR + +PE + T SDV+S+G+VL E+++
Sbjct: 177 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 107/221 (48%), Gaps = 14/221 (6%)
Query: 55 AAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLE--STNQV-VAIKQLDRNGLQGNR 111
H F +EL A N D ++G G FG V GRL+ S ++ VAIK L + R
Sbjct: 22 TVHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 78
Query: 112 -EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWT 170
+FL E ++ HPN++ L G ++V EYM GSL+ L +
Sbjct: 79 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 138
Query: 171 TRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH 230
+R G A G++YL D ++RDL NIL+ K+SDFGL+++ +
Sbjct: 139 GMLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 192
Query: 231 VSTRVMGT-YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+TR + +PE + T SDV+S+G+VL E+++
Sbjct: 193 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V+ G ++ +V A+K L + G + FL E ++ L H LV L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKV-AVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ E+M GSL D L K L + +A A+G+ Y+ K I+
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERKN---YIH 132
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYAMTGQLTL 254
RDL+ +N+L+ E K++DFGLA+ V + + R + + APE G T+
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLAR---VIEDNEYTAREGAKFPIKWTAPEAINFGCFTI 189
Query: 255 KSDVYSFGVVLLEIIT 270
KS+V+SFG++L EI+T
Sbjct: 190 KSNVWSFGILLYEIVT 205
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 107/221 (48%), Gaps = 14/221 (6%)
Query: 55 AAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLE--STNQV-VAIKQLDRNGLQGNR 111
H F +EL A N D ++G G FG V GRL+ S ++ VAIK L + R
Sbjct: 34 TVHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 112 -EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWT 170
+FL E ++ HPN++ L G ++V EYM GSL+ L +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 171 TRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH 230
+R G A G++YL D ++RDL NIL+ K+SDFGL+++ +
Sbjct: 151 GMLR---GIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 231 VSTRVMGT-YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+TR + +PE + T SDV+S+G+VL E+++
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 107/221 (48%), Gaps = 14/221 (6%)
Query: 55 AAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLE--STNQV-VAIKQLDRNGLQGNR 111
H F +EL A N D ++G G FG V GRL+ S ++ VAIK L + R
Sbjct: 32 TVHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 88
Query: 112 -EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWT 170
+FL E ++ HPN++ L G ++V EYM GSL+ L +
Sbjct: 89 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 148
Query: 171 TRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH 230
+R G A G++YL D ++RDL NIL+ K+SDFGL+++ +
Sbjct: 149 GMLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 202
Query: 231 VSTRVMGT-YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+TR + +PE + T SDV+S+G+VL E+++
Sbjct: 203 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 107/221 (48%), Gaps = 14/221 (6%)
Query: 55 AAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLE--STNQV-VAIKQLDRNGLQGNR 111
H F +EL A N D ++G G FG V GRL+ S ++ VAIK L + R
Sbjct: 34 TVHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 112 -EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWT 170
+FL E ++ HPN++ L G ++V EYM GSL+ L +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 171 TRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH 230
+R G A G++YL D ++RDL NIL+ K+SDFGL+++ +
Sbjct: 151 GMLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 231 VSTRVMGT-YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+TR + +PE + T SDV+S+G+VL E+++
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 107/221 (48%), Gaps = 14/221 (6%)
Query: 55 AAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLE--STNQV-VAIKQLDRNGLQGNR 111
H F +EL A N D ++G G FG V GRL+ S ++ VAIK L + R
Sbjct: 34 TVHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 112 -EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWT 170
+FL E ++ HPN++ L G ++V EYM GSL+ L +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 171 TRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH 230
+R G A G++YL D ++RDL NIL+ K+SDFGL+++ +
Sbjct: 151 GMLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 231 VSTRVMGT-YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+TR + +PE + T SDV+S+G+VL E+++
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 107/221 (48%), Gaps = 14/221 (6%)
Query: 55 AAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLE--STNQV-VAIKQLDRNGLQGNR 111
H F +EL A N D ++G G FG V GRL+ S ++ VAIK L + R
Sbjct: 34 TVHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 112 -EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWT 170
+FL E ++ HPN++ L G ++V EYM GSL+ L +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 171 TRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH 230
+R G A G++YL D ++RDL NIL+ K+SDFGL+++ +
Sbjct: 151 GMLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 231 VSTRVMGT-YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+TR + +PE + T SDV+S+G+VL E+++
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 107/221 (48%), Gaps = 14/221 (6%)
Query: 55 AAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLE--STNQV-VAIKQLDRNGLQGNR 111
H F +EL A N D ++G G FG V GRL+ S ++ VAIK L + R
Sbjct: 34 TVHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 112 -EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWT 170
+FL E ++ HPN++ L G ++V EYM GSL+ L +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 171 TRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH 230
+R G A G++YL D ++RDL NIL+ K+SDFGL+++ +
Sbjct: 151 GMLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 231 VSTRVMGT-YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+TR + +PE + T SDV+S+G+VL E+++
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGN---REFLVEVLMLSLLHHPNLVNLIG 133
+G G FG VY R ++VVAIK++ +G Q N ++ + EV L L HPN + G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
LV EY LGS D L KK L + GA +GL YLH
Sbjct: 122 CYLREHTAWLVMEYC-LGSASDLLE---VHKKPLQEVEIAAVTHGALQGLAYLHSHN--- 174
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAK-LGPVGDKTHVSTRVMGTYGYCAPEYAMT--- 249
+I+RD+K NILL E KL DFG A + P + +GT + APE +
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANXFVGTPYWMAPEVILAMDE 227
Query: 250 GQLTLKSDVYSFGVVLLEIITGRKAIDNTRA 280
GQ K DV+S G+ +E+ + + N A
Sbjct: 228 GQYDGKVDVWSLGITCIELAERKPPLFNMNA 258
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGN---REFLVEVLMLSLLHHPNLVNLIG 133
+G G FG VY R ++VVAIK++ +G Q N ++ + EV L L HPN + G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
LV EY LGS D L KK L + GA +GL YLH
Sbjct: 83 CYLREHTAWLVMEYC-LGSASDLLE---VHKKPLQEVEIAAVTHGALQGLAYLHSHN--- 135
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAK-LGPVGDKTHVSTRVMGTYGYCAPEYAMT--- 249
+I+RD+K NILL E KL DFG A + P + +GT + APE +
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANXFVGTPYWMAPEVILAMDE 188
Query: 250 GQLTLKSDVYSFGVVLLEIITGRKAIDNTRA 280
GQ K DV+S G+ +E+ + + N A
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPPLFNMNA 219
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 12/201 (5%)
Query: 76 LLGEGGFGRVYKGRLESTNQV----VAIKQLDRNGLQGNR-EFLVEVLMLSLLHHPNLVN 130
++G G FG VYKG L++++ VAIK L + R +FL E ++ H N++
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L G + +++ EYM G+L+ L + + L +R G A G++YL A
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKYL---A 164
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAK-LGPVGDKTHVSTRVMGTYGYCAPEYAMT 249
N ++RDL NIL+ K+SDFGL++ L + T+ ++ + APE
Sbjct: 165 NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY 224
Query: 250 GQLTLKSDVYSFGVVLLEIIT 270
+ T SDV+SFG+V+ E++T
Sbjct: 225 RKFTSASDVWSFGIVMWEVMT 245
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 106/221 (47%), Gaps = 14/221 (6%)
Query: 55 AAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLE--STNQV-VAIKQLDRNGLQGNR 111
H F +EL A N D ++G G FG V GRL+ S ++ VAIK L + R
Sbjct: 34 TVHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 112 -EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWT 170
+FL E ++ HPN++ L G ++V EYM GSL+ L +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 171 TRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH 230
+R G A G++YL D ++RDL NIL+ K+SDFGL ++ +
Sbjct: 151 GMLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA 204
Query: 231 VSTRVMGT-YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+TR + +PE + T SDV+S+G+VL E+++
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 133/283 (46%), Gaps = 39/283 (13%)
Query: 76 LLGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNL 131
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 132 IGYCADGD-QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG--AAKGLEYLHD 188
+G C + L+V YM G L + + + + + T + I G AKG+++L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRN-----ETHNPTVKDLIGFGLQVAKGMKFL-- 150
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK--LGPVGDKTHVSTRVMGTYGYCAPEY 246
A+ ++RDL N +L E + K++DFGLA+ L D H T + A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEH---NLVAWARPLFKDRRKFSQM 303
T + T KSDV+SFGV+L E++ TR A + N L + RR
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELM--------TRGAPPYPDVNTFDITVYLLQGRR----- 256
Query: 304 ADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALT 346
LQ +Y LY+ V C + MRP +++V+ ++
Sbjct: 257 ---LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 293
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 9/194 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G G V+ G +V A+K L + G FL E ++ L H LV L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ EYM GSL D L P +L + +AA A+G+ ++ ++ I+
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL+ +NIL+ + K++DFGLA+L + T + APE G T+KS
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXT-AREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 257 DVYSFGVVLLEIIT 270
DV+SFG++L EI+T
Sbjct: 192 DVWSFGILLTEIVT 205
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 16/202 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRN-GLQGNREFLVEVLMLSLLHHPNLVNL 131
LGEG FG+V Y + T ++VA+K L + G Q + E+ +L L+H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 132 IGYCAD-GDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
G C D G++ L LV EY+PLGSL D+L + + + A +G+ YLH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHSQ 136
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH-VSTRVMGTYGYCAPEYAM 248
I+R+L N+LL K+ DFGLAK P G + + V + APE
Sbjct: 137 H---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ SDV+SFGV L E++T
Sbjct: 194 EYKFYYASDVWSFGVTLYELLT 215
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLHHPNLVN 130
LGE FG+VYKG L Q VAIK L D+ EF E ++ + L HPN+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD------------KKRLDWTTRMRIAAG 178
L+G +++ Y G L + L P K L+ + + A
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 179 AAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
A G+EYL ++ V+++DL N+L+ + + K+SD GL + D + +
Sbjct: 154 IAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 239 YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ APE M G+ ++ SD++S+GVVL E+ +
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRN-GLQGNREFLVEVLMLSLLHHPNLVNL 131
LGEG FG+V Y + T ++VA+K L + G Q + E+ +L L+H +++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 132 IGYCAD-GDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
G C D G L LV EY+PLGSL D+L + + + A +G+ YLH +
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH-VSTRVMGTYGYCAPEYAM 248
I+RDL N+LL K+ DFGLAK P G + + V + APE
Sbjct: 154 H---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLK 210
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ SDV+SFGV L E++T
Sbjct: 211 EYKFYYASDVWSFGVTLYELLT 232
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLHHPNLVN 130
LGE FG+VYKG L Q VAIK L D+ EF E ++ + L HPN+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD------------KKRLDWTTRMRIAAG 178
L+G +++ Y G L + L P K L+ + + A
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 179 AAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
A G+EYL ++ V+++DL N+L+ + + K+SD GL + D + +
Sbjct: 137 IAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 239 YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ APE M G+ ++ SD++S+GVVL E+ +
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 16/202 (7%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRN-GLQGNREFLVEVLMLSLLHHPNLVNL 131
LGEG FG+V Y + T ++VA+K L + G Q + E+ +L L+H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 132 IGYCAD-GDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
G C D G++ L LV EY+PLGSL D+L + + + A +G+ YLH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQ 136
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH-VSTRVMGTYGYCAPEYAM 248
I+R+L N+LL K+ DFGLAK P G + + V + APE
Sbjct: 137 H---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ SDV+SFGV L E++T
Sbjct: 194 EYKFYYASDVWSFGVTLYELLT 215
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 97/206 (47%), Gaps = 13/206 (6%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSLL-HH 125
NF +LG+G FG+V R++ T + A+K L ++ + + + + E +LSL +H
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P L L D+ V E++ G L H+ +R D AA L +
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK----SRRFDEARARFYAAEIISALMF 139
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LHDK +IYRDLK N+LL H KL+DFG+ K G T + GT Y APE
Sbjct: 140 LHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPDYIAPE 194
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
D ++ GV+L E++ G
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 132/283 (46%), Gaps = 39/283 (13%)
Query: 76 LLGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNL 131
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 132 IGYCADGD-QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG--AAKGLEYLHD 188
+G C + L+V YM G L + + + + + T + I G AKG+++L
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRN-----ETHNPTVKDLIGFGLQVAKGMKFL-- 147
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK--LGPVGDKTHVSTRVMGTYGYCAPEY 246
A+ ++RDL N +L E + K++DFGLA+ D H T + A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEH---NLVAWARPLFKDRRKFSQM 303
T + T KSDV+SFGV+L E++ TR A + N L + RR
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELM--------TRGAPPYPDVNTFDITVYLLQGRR----- 253
Query: 304 ADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALT 346
LQ +Y LY+ V C + MRP +++V+ ++
Sbjct: 254 ---LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 290
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 14/221 (6%)
Query: 55 AAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLE--STNQV-VAIKQLDRNGLQGNR 111
H F +EL A N D ++G G FG V GRL+ S ++ VAIK L + R
Sbjct: 34 TVHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 112 -EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWT 170
+FL E ++ HPN++ L G ++V E M GSL+ L +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV 150
Query: 171 TRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH 230
+R G A G++YL D ++RDL NIL+ K+SDFGL+++ +
Sbjct: 151 GMLR---GIASGMKYLSDMG---AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 231 VSTRVMGT-YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+TR + +PE + T SDV+S+G+VL E+++
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 132/283 (46%), Gaps = 39/283 (13%)
Query: 76 LLGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNL 131
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 132 IGYCADGD-QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG--AAKGLEYLHD 188
+G C + L+V YM G L + + + + + T + I G AKG+++L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRN-----ETHNPTVKDLIGFGLQVAKGMKFL-- 149
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK--LGPVGDKTHVSTRVMGTYGYCAPEY 246
A+ ++RDL N +L E + K++DFGLA+ D H T + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEH---NLVAWARPLFKDRRKFSQM 303
T + T KSDV+SFGV+L E++ TR A + N L + RR
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELM--------TRGAPPYPDVNTFDITVYLLQGRR----- 255
Query: 304 ADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALT 346
LQ +Y LY+ V C + MRP +++V+ ++
Sbjct: 256 ---LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 14/220 (6%)
Query: 56 AHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLE--STNQV-VAIKQLDRNGLQGNR- 111
H F +EL A N D ++G G FG V GRL+ S ++ VAIK L + R
Sbjct: 6 VHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 62
Query: 112 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTT 171
+FL E ++ HPN++ L G ++V E M GSL+ L +
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG 122
Query: 172 RMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHV 231
+R G A G++YL D ++RDL NIL+ K+SDFGL+++ +
Sbjct: 123 MLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 176
Query: 232 STRVMGT-YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+TR + +PE + T SDV+S+G+VL E+++
Sbjct: 177 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 132/283 (46%), Gaps = 39/283 (13%)
Query: 76 LLGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNL 131
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 132 IGYCADGD-QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG--AAKGLEYLHD 188
+G C + L+V YM G L + + + + + T + I G AKG+++L
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRN-----ETHNPTVKDLIGFGLQVAKGMKFL-- 208
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK--LGPVGDKTHVSTRVMGTYGYCAPEY 246
A+ ++RDL N +L E + K++DFGLA+ D H T + A E
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEH---NLVAWARPLFKDRRKFSQM 303
T + T KSDV+SFGV+L E++ TR A + N L + RR
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELM--------TRGAPPYPDVNTFDITVYLLQGRR----- 314
Query: 304 ADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALT 346
LQ +Y LY+ V C + MRP +++V+ ++
Sbjct: 315 ---LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 351
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 55 AAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLE---STNQVVAIKQLDRNGLQGNR 111
A H F +EL A + + ++G G FG V GRL+ + VAIK L + R
Sbjct: 32 AVHQFA-KELDASC--IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQR 88
Query: 112 -EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWT 170
+FL E ++ HPN+V+L G G ++V E+M G+L+ L +
Sbjct: 89 RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLV 148
Query: 171 TRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH 230
+R G A G+ YL D ++RDL NIL+ K+SDFGL+++ D
Sbjct: 149 GMLR---GIAAGMRYLADMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVIE-DDPEA 201
Query: 231 VSTRVMGT--YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
V T G + APE + T SDV+S+G+V+ E+++
Sbjct: 202 VYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 132/283 (46%), Gaps = 39/283 (13%)
Query: 76 LLGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNL 131
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 132 IGYCADGD-QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG--AAKGLEYLHD 188
+G C + L+V YM G L + + + + + T + I G AKG+++L
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRN-----ETHNPTVKDLIGFGLQVAKGMKFL-- 154
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK--LGPVGDKTHVSTRVMGTYGYCAPEY 246
A+ ++RDL N +L E + K++DFGLA+ D H T + A E
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEH---NLVAWARPLFKDRRKFSQM 303
T + T KSDV+SFGV+L E++ TR A + N L + RR
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELM--------TRGAPPYPDVNTFDITVYLLQGRR----- 260
Query: 304 ADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALT 346
LQ +Y LY+ V C + MRP +++V+ ++
Sbjct: 261 ---LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 297
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 132/283 (46%), Gaps = 39/283 (13%)
Query: 76 LLGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNL 131
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 132 IGYCADGD-QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG--AAKGLEYLHD 188
+G C + L+V YM G L + + + + + T + I G AKG+++L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRN-----ETHNPTVKDLIGFGLQVAKGMKFL-- 149
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK--LGPVGDKTHVSTRVMGTYGYCAPEY 246
A+ ++RDL N +L E + K++DFGLA+ D H T + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEH---NLVAWARPLFKDRRKFSQM 303
T + T KSDV+SFGV+L E++ TR A + N L + RR
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELM--------TRGAPPYPDVNTFDITVYLLQGRR----- 255
Query: 304 ADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALT 346
LQ +Y LY+ V C + MRP +++V+ ++
Sbjct: 256 ---LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 132/283 (46%), Gaps = 39/283 (13%)
Query: 76 LLGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNL 131
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 132 IGYCADGD-QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG--AAKGLEYLHD 188
+G C + L+V YM G L + + + + + T + I G AKG+++L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRN-----ETHNPTVKDLIGFGLQVAKGMKFL-- 150
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK--LGPVGDKTHVSTRVMGTYGYCAPEY 246
A+ ++RDL N +L E + K++DFGLA+ D H T + A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEH---NLVAWARPLFKDRRKFSQM 303
T + T KSDV+SFGV+L E++ TR A + N L + RR
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELM--------TRGAPPYPDVNTFDITVYLLQGRR----- 256
Query: 304 ADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALT 346
LQ +Y LY+ V C + MRP +++V+ ++
Sbjct: 257 ---LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 293
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 14/221 (6%)
Query: 55 AAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLE--STNQV-VAIKQLDRNGLQGNR 111
H F +EL A N D ++G G FG V GRL+ S ++ VAIK L + R
Sbjct: 34 TVHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 112 -EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWT 170
+FL E ++ HPN++ L G ++V E M GSL+ L +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV 150
Query: 171 TRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH 230
+R G A G++YL D ++RDL NIL+ K+SDFGL+++ +
Sbjct: 151 GMLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 231 VSTRVMGT-YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+TR + +PE + T SDV+S+G+VL E+++
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 134/285 (47%), Gaps = 43/285 (15%)
Query: 76 LLGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNL 131
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 132 IGYCADGD-QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG--AAKGLEYLHD 188
+G C + L+V YM G L + + + + + T + I G AKG++YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRN-----ETHNPTVKDLIGFGLQVAKGMKYL-- 148
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDK----THVSTRVMGTYGYCAP 244
A+ ++RDL N +L E + K++DFGLA+ + DK H T + A
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEXXSVHNKTGAKLPVKWMAL 205
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEH---NLVAWARPLFKDRRKFS 301
E T + T KSDV+SFGV+L E++ TR A + N L + RR
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELM--------TRGAPPYPDVNTFDITVYLLQGRR--- 254
Query: 302 QMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALT 346
LQ +Y LY+ V C + MRP +++V+ ++
Sbjct: 255 -----LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 291
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 134/285 (47%), Gaps = 43/285 (15%)
Query: 76 LLGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNL 131
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 132 IGYCADGD-QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG--AAKGLEYLHD 188
+G C + L+V YM G L + + + + + T + I G AKG++YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRN-----ETHNPTVKDLIGFGLQVAKGMKYL-- 149
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDK----THVSTRVMGTYGYCAP 244
A+ ++RDL N +L E + K++DFGLA+ + DK H T + A
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEH---NLVAWARPLFKDRRKFS 301
E T + T KSDV+SFGV+L E++ TR A + N L + RR
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELM--------TRGAPPYPDVNTFDITVYLLQGRR--- 255
Query: 302 QMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALT 346
LQ +Y LY+ V C + MRP +++V+ ++
Sbjct: 256 -----LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 120/284 (42%), Gaps = 37/284 (13%)
Query: 77 LGEGGFGRVYKGRLE-----STNQVVAIKQLDRNG-LQGNREFLVEVLMLSLLHHPNLVN 130
LG+G FG VY+G VA+K ++ + L+ EFL E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKR------LDWTTRMRIAAGAAKGLE 184
L+G + G L+V E M G L+ +L L P+ + +++AA A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
YL+ K ++RDL N ++ + K+ DFG+ + D + + + AP
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMA 304
E G T SD++SFGVVL EI + + G N Q+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSN---------------EQVL 242
Query: 305 DPTLQGQY---PVRGLYQALAVAAMCVQEQPNMRPLIADVVTAL 345
+ G Y P + + MC Q PNMRP ++V L
Sbjct: 243 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 134/285 (47%), Gaps = 43/285 (15%)
Query: 76 LLGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNL 131
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 132 IGYCADGD-QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG--AAKGLEYLHD 188
+G C + L+V YM G L + + + + + T + I G AKG++YL
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRN-----ETHNPTVKDLIGFGLQVAKGMKYL-- 168
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDK----THVSTRVMGTYGYCAP 244
A+ ++RDL N +L E + K++DFGLA+ + DK H T + A
Sbjct: 169 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 225
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEH---NLVAWARPLFKDRRKFS 301
E T + T KSDV+SFGV+L E++ TR A + N L + RR
Sbjct: 226 ESLQTQKFTTKSDVWSFGVLLWELM--------TRGAPPYPDVNTFDITVYLLQGRR--- 274
Query: 302 QMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALT 346
LQ +Y LY+ V C + MRP +++V+ ++
Sbjct: 275 -----LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 311
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 134/285 (47%), Gaps = 43/285 (15%)
Query: 76 LLGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNL 131
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 132 IGYCADGD-QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG--AAKGLEYLHD 188
+G C + L+V YM G L + + + + + T + I G AKG++YL
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRN-----ETHNPTVKDLIGFGLQVAKGMKYL-- 146
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDK----THVSTRVMGTYGYCAP 244
A+ ++RDL N +L E + K++DFGLA+ + DK H T + A
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 203
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEH---NLVAWARPLFKDRRKFS 301
E T + T KSDV+SFGV+L E++ TR A + N L + RR
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELM--------TRGAPPYPDVNTFDITVYLLQGRR--- 252
Query: 302 QMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALT 346
LQ +Y LY+ V C + MRP +++V+ ++
Sbjct: 253 -----LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 289
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 134/285 (47%), Gaps = 43/285 (15%)
Query: 76 LLGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNL 131
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 132 IGYCADGD-QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG--AAKGLEYLHD 188
+G C + L+V YM G L + + + + + T + I G AKG++YL
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRN-----ETHNPTVKDLIGFGLQVAKGMKYL-- 167
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDK----THVSTRVMGTYGYCAP 244
A+ ++RDL N +L E + K++DFGLA+ + DK H T + A
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 224
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEH---NLVAWARPLFKDRRKFS 301
E T + T KSDV+SFGV+L E++ TR A + N L + RR
Sbjct: 225 ESLQTQKFTTKSDVWSFGVLLWELM--------TRGAPPYPDVNTFDITVYLLQGRR--- 273
Query: 302 QMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALT 346
LQ +Y LY+ V C + MRP +++V+ ++
Sbjct: 274 -----LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 310
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 134/285 (47%), Gaps = 43/285 (15%)
Query: 76 LLGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNL 131
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 132 IGYCADGD-QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG--AAKGLEYLHD 188
+G C + L+V YM G L + + + + + T + I G AKG++YL
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRN-----ETHNPTVKDLIGFGLQVAKGMKYL-- 141
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDK----THVSTRVMGTYGYCAP 244
A+ ++RDL N +L E + K++DFGLA+ + DK H T + A
Sbjct: 142 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 198
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEH---NLVAWARPLFKDRRKFS 301
E T + T KSDV+SFGV+L E++ TR A + N L + RR
Sbjct: 199 ESLQTQKFTTKSDVWSFGVLLWELM--------TRGAPPYPDVNTFDITVYLLQGRR--- 247
Query: 302 QMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALT 346
LQ +Y LY+ V C + MRP +++V+ ++
Sbjct: 248 -----LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 284
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 134/285 (47%), Gaps = 43/285 (15%)
Query: 76 LLGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNL 131
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 132 IGYCADGD-QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG--AAKGLEYLHD 188
+G C + L+V YM G L + + + + + T + I G AKG++YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRN-----ETHNPTVKDLIGFGLQVAKGMKYL-- 148
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDK----THVSTRVMGTYGYCAP 244
A+ ++RDL N +L E + K++DFGLA+ + DK H T + A
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 205
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEH---NLVAWARPLFKDRRKFS 301
E T + T KSDV+SFGV+L E++ TR A + N L + RR
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELM--------TRGAPPYPDVNTFDITVYLLQGRR--- 254
Query: 302 QMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALT 346
LQ +Y LY+ V C + MRP +++V+ ++
Sbjct: 255 -----LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 291
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 134/285 (47%), Gaps = 43/285 (15%)
Query: 76 LLGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNL 131
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 132 IGYCADGD-QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG--AAKGLEYLHD 188
+G C + L+V YM G L + + + + + T + I G AKG++YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRN-----ETHNPTVKDLIGFGLQVAKGMKYL-- 149
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDK----THVSTRVMGTYGYCAP 244
A+ ++RDL N +L E + K++DFGLA+ + DK H T + A
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEH---NLVAWARPLFKDRRKFS 301
E T + T KSDV+SFGV+L E++ TR A + N L + RR
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELM--------TRGAPPYPDVNTFDITVYLLQGRR--- 255
Query: 302 QMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALT 346
LQ +Y LY+ V C + MRP +++V+ ++
Sbjct: 256 -----LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 134/285 (47%), Gaps = 43/285 (15%)
Query: 76 LLGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNL 131
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 132 IGYCADGD-QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG--AAKGLEYLHD 188
+G C + L+V YM G L + + + + + T + I G AKG++YL
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRN-----ETHNPTVKDLIGFGLQVAKGMKYL-- 147
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDK----THVSTRVMGTYGYCAP 244
A+ ++RDL N +L E + K++DFGLA+ + DK H T + A
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 204
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEH---NLVAWARPLFKDRRKFS 301
E T + T KSDV+SFGV+L E++ TR A + N L + RR
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELM--------TRGAPPYPDVNTFDITVYLLQGRR--- 253
Query: 302 QMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALT 346
LQ +Y LY+ V C + MRP +++V+ ++
Sbjct: 254 -----LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 290
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 107/226 (47%), Gaps = 20/226 (8%)
Query: 59 FTFRELAAVTKNFR----ADCL-----LGEGGFGRVYKGRLESTNQ---VVAIKQLDRNG 106
FTF + + F A C+ +G G FG V GRL+ + VAIK L
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 107 L-QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKK 165
+ R+FL E ++ HPN+++L G +++ EYM GSL+ L +
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK---NDG 126
Query: 166 RLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPV 225
R + + G G++YL D + ++RDL NIL+ K+SDFG++++
Sbjct: 127 RFTVIQLVGMLRGIGSGMKYLSDMS---AVHRDLAARNILVNSNLVCKVSDFGMSRVLED 183
Query: 226 GDKTHVSTRVMGT-YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ +TR + APE + T SDV+S+G+V+ E+++
Sbjct: 184 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 134/285 (47%), Gaps = 43/285 (15%)
Query: 76 LLGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNL 131
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 132 IGYCADGD-QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG--AAKGLEYLHD 188
+G C + L+V YM G L + + + + + T + I G AKG++YL
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRN-----ETHNPTVKDLIGFGLQVAKGMKYL-- 144
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDK----THVSTRVMGTYGYCAP 244
A+ ++RDL N +L E + K++DFGLA+ + DK H T + A
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 201
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEH---NLVAWARPLFKDRRKFS 301
E T + T KSDV+SFGV+L E++ TR A + N L + RR
Sbjct: 202 ESLQTQKFTTKSDVWSFGVLLWELM--------TRGAPPYPDVNTFDITVYLLQGRR--- 250
Query: 302 QMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALT 346
LQ +Y LY+ V C + MRP +++V+ ++
Sbjct: 251 -----LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 287
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 21/203 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLD-------RNGLQGNREFLVEVLMLSLLHHPNL 128
LGEG F VYK R ++TNQ+VAIK++ ++G+ NR L E+ +L L HPN+
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGI--NRTALREIKLLQELSHPNI 74
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMR-IAAGAAKGLEYLH 187
+ L+ LV+++M E L + D + + ++ +GLEYLH
Sbjct: 75 IGLLDAFGHKSNISLVFDFM-----ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYA 247
+++RDLK +N+LL E KL+DFGLAK G + T Y APE
Sbjct: 130 QHW---ILHRDLKPNNLLLDENGVLKLADFGLAK--SFGSPNRAYXHQVVTRWYRAPELL 184
Query: 248 MTGQLT-LKSDVYSFGVVLLEII 269
++ + D+++ G +L E++
Sbjct: 185 FGARMYGVGVDMWAVGCILAELL 207
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 108/225 (48%), Gaps = 20/225 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGL---QGNREFLVEVLMLSLLHH- 125
+F ++G GGFG VY R T ++ A+K LD+ + QG L E +MLSL+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 126 --PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRI-AAGAAKG 182
P +V + D+ + + M G L HL + + MR AA G
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEIILG 304
Query: 183 LEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYC 242
LE++H++ V+YRDLK +NILL E H ++SD GLA K H S +GT+GY
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYM 357
Query: 243 APEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNL 286
APE G +D +S G +L +++ G + +H +
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 108/225 (48%), Gaps = 20/225 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGL---QGNREFLVEVLMLSLLHH- 125
+F ++G GGFG VY R T ++ A+K LD+ + QG L E +MLSL+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 126 --PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRI-AAGAAKG 182
P +V + D+ + + M G L HL + + MR AA G
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEIILG 304
Query: 183 LEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYC 242
LE++H++ V+YRDLK +NILL E H ++SD GLA K H S +GT+GY
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYM 357
Query: 243 APEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNL 286
APE G +D +S G +L +++ G + +H +
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 12/207 (5%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F V R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 126 PNLVNLIGYCADGDQRLLV-YEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLE 184
P V L +C D++L Y G L ++ + D T A LE
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALE 151
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
YLH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P
Sbjct: 152 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITG 271
E SD+++ G ++ +++ G
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 108/225 (48%), Gaps = 20/225 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGL---QGNREFLVEVLMLSLLHH- 125
+F ++G GGFG VY R T ++ A+K LD+ + QG L E +MLSL+
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 248
Query: 126 --PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRI-AAGAAKG 182
P +V + D+ + + M G L HL + + MR AA G
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEIILG 303
Query: 183 LEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYC 242
LE++H++ V+YRDLK +NILL E H ++SD GLA K H S +GT+GY
Sbjct: 304 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYM 356
Query: 243 APEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNL 286
APE G +D +S G +L +++ G + +H +
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 108/225 (48%), Gaps = 20/225 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGL---QGNREFLVEVLMLSLLHH- 125
+F ++G GGFG VY R T ++ A+K LD+ + QG L E +MLSL+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 126 --PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRI-AAGAAKG 182
P +V + D+ + + M G L HL + + MR AA G
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEIILG 304
Query: 183 LEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYC 242
LE++H++ V+YRDLK +NILL E H ++SD GLA K H S +GT+GY
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYM 357
Query: 243 APEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNL 286
APE G +D +S G +L +++ G + +H +
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 104/230 (45%), Gaps = 16/230 (6%)
Query: 54 IAAHTFTFRELAAVT-KNFRADCLLGEGGFGRVYKGRL-----ESTNQVVAIKQL-DRNG 106
A T + +L V KN LG G FG VY+G++ + + VA+K L +
Sbjct: 15 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 74
Query: 107 LQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDL---PPD 163
Q +FL+E L++S L+H N+V IG R ++ E M G L+ L + P
Sbjct: 75 EQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 134
Query: 164 KKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLA 220
L + +A A G +YL + I+RD+ N LL G G K+ DFG+A
Sbjct: 135 PSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 221 KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ M + PE M G T K+D +SFGV+L EI +
Sbjct: 192 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 104/230 (45%), Gaps = 16/230 (6%)
Query: 54 IAAHTFTFRELAAVT-KNFRADCLLGEGGFGRVYKGRL-----ESTNQVVAIKQL-DRNG 106
A T + +L V KN LG G FG VY+G++ + + VA+K L +
Sbjct: 29 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 88
Query: 107 LQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDL---PPD 163
Q +FL+E L++S L+H N+V IG R ++ E M G L+ L + P
Sbjct: 89 EQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 148
Query: 164 KKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLA 220
L + +A A G +YL + I+RD+ N LL G G K+ DFG+A
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
Query: 221 KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ M + PE M G T K+D +SFGV+L EI +
Sbjct: 206 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F V R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P V L D ++ Y G L ++ + D T A LEY
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEY 125
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +PE
Sbjct: 126 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 182
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
SD+++ G ++ +++ G
Sbjct: 183 LLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 126/281 (44%), Gaps = 30/281 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR-EFLVEVLMLSLLHHPNLVNLIGY 134
++G G V + VAIK+++ Q + E L E+ +S HHPN+V+
Sbjct: 17 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 76
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKR----LDWTTRMRIAAGAAKGLEYLHDKA 190
D+ LV + + GS+ D + + + LD +T I +GLEYLH
Sbjct: 77 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 136
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGL-AKLGPVGDKTHVSTR--VMGTYGYCAPE-Y 246
I+RD+K NILLGE +++DFG+ A L GD T R +GT + APE
Sbjct: 137 Q---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 193
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADP 306
K+D++SFG+ +E+ TG AA H P K Q P
Sbjct: 194 EQVRGYDFKADIWSFGITAIELATG--------AAPYHKY-----PPMKVLMLTLQNDPP 240
Query: 307 TLQGQYPVRGLYQALA-----VAAMCVQEQPNMRPLIADVV 342
+L+ + + + + ++C+Q+ P RP A+++
Sbjct: 241 SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F V R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P V L D ++ Y G L ++ + D T A LEY
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEY 124
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +PE
Sbjct: 125 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 181
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
SD+++ G ++ +++ G
Sbjct: 182 LLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 126/281 (44%), Gaps = 30/281 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR-EFLVEVLMLSLLHHPNLVNLIGY 134
++G G V + VAIK+++ Q + E L E+ +S HHPN+V+
Sbjct: 22 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 81
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKR----LDWTTRMRIAAGAAKGLEYLHDKA 190
D+ LV + + GS+ D + + + LD +T I +GLEYLH
Sbjct: 82 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 141
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGL-AKLGPVGDKTHVSTR--VMGTYGYCAPE-Y 246
I+RD+K NILLGE +++DFG+ A L GD T R +GT + APE
Sbjct: 142 Q---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 198
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADP 306
K+D++SFG+ +E+ TG AA H P K Q P
Sbjct: 199 EQVRGYDFKADIWSFGITAIELATG--------AAPYHKY-----PPMKVLMLTLQNDPP 245
Query: 307 TLQGQYPVRGLYQALA-----VAAMCVQEQPNMRPLIADVV 342
+L+ + + + + ++C+Q+ P RP A+++
Sbjct: 246 SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 10/206 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F V R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P V L D ++ Y G L ++ + D T A LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKI----GSFDETCTRFYTAEIVSALEY 147
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
+ SD+++ G ++ +++ G
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRN-GLQGNREFLVEVLMLSLLHHPNLVNL 131
LGEG FG+V Y + T ++VA+K L G Q + E+ +L L+H ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 132 IGYCADGDQR--LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
G C D ++ LV EY+PLGSL D+L + + + A +G+ YLH +
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLHAQ 130
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMG---TYGYCAPEY 246
I+R L N+LL K+ DFGLAK P G + + R G + Y APE
Sbjct: 131 H---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHE-YYRVREDGDSPVFWY-APEC 185
Query: 247 AMTGQLTLKSDVYSFGVVLLEIIT 270
+ SDV+SFGV L E++T
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 77 LGEGGFGRV----YKGRLESTNQVVAIKQLDRN-GLQGNREFLVEVLMLSLLHHPNLVNL 131
LGEG FG+V Y + T ++VA+K L G Q + E+ +L L+H ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 132 IGYCADGDQR--LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
G C D ++ LV EY+PLGSL D+L + + + A +G+ YLH +
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLHAQ 131
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMG---TYGYCAPEY 246
I+R L N+LL K+ DFGLAK P G + + R G + Y APE
Sbjct: 132 H---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHE-YYRVREDGDSPVFWY-APEC 186
Query: 247 AMTGQLTLKSDVYSFGVVLLEIIT 270
+ SDV+SFGV L E++T
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLT 210
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 22/215 (10%)
Query: 69 KNFRADCL-----LGEGGFGRVYKGRLESTNQV---VAIKQLDRNGLQGNR-EFLVEVLM 119
K A C+ +G G FG V GRL+ + VAIK L + R +FL E +
Sbjct: 17 KEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASI 76
Query: 120 LSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA-- 177
+ HPN+++L G ++V EYM GSL+ L KK T +++
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL------KKNDGQFTVIQLVGML 130
Query: 178 -GAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVM 236
G + G++YL D ++RDL NIL+ K+SDFGL+++ + +TR
Sbjct: 131 RGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 187
Query: 237 GT-YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ APE + T SDV+S+G+V+ E+++
Sbjct: 188 KIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F V R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P V L D ++ Y G L ++ + D T A LEY
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEY 148
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
SD+++ G ++ +++ G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F V R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P V L D ++ Y G L ++ + D T A LEY
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEY 122
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +PE
Sbjct: 123 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 179
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
SD+++ G ++ +++ G
Sbjct: 180 LLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F V R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P V L D ++ Y G L ++ + D T A LEY
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEY 123
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +PE
Sbjct: 124 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 180
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
SD+++ G ++ +++ G
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 106/232 (45%), Gaps = 37/232 (15%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQV-----VAIKQLDRNGLQGNREFLVEVL--MLS 121
+N +LG G FG+V ++ VA+K L RE L+ L M
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 122 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPP----------DKKRLDWTT 171
L H N+VNL+G C L++EY G L ++L ++KRL+
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 172 RMRI---------AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKL 222
+ + A AKG+E+L K+ ++RDL N+L+ G K+ DFGLA+
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLAR- 220
Query: 223 GPVGDKTHVSTRVMGT----YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ D +V V G + APE G T+KSDV+S+G++L EI +
Sbjct: 221 DIMSDSNYV---VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 62 RELAAVTKNFRADCL-----LGEGGFGRVYKGRLESTNQ---VVAIKQLDRNGL-QGNRE 112
RE A K A C+ +G G FG V GRL+ + VAIK L + R+
Sbjct: 5 REFA---KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD 61
Query: 113 FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTR 172
FL E ++ HPN+++L G +++ EYM GSL+ L + R
Sbjct: 62 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK---NDGRFTVIQL 118
Query: 173 MRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVS 232
+ + G G++YL D + ++RDL NIL+ K+SDFG++++ + +
Sbjct: 119 VGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 175
Query: 233 TRVMGT-YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
TR + APE + T SDV+S+G+V+ E+++
Sbjct: 176 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F V R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P V L D ++ Y G L ++ + D T A LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEY 145
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
SD+++ G ++ +++ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Query: 54 IAAHTFTFRELAAVT-KNFRADCLLGEGGFGRVYKGRL-----ESTNQVVAIKQL-DRNG 106
A T + +L V KN LG G FG VY+G++ + + VA+K L +
Sbjct: 14 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 73
Query: 107 LQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDL---PPD 163
Q +FL+E L++S +H N+V IG R ++ E M G L+ L + P
Sbjct: 74 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQ 133
Query: 164 KKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLA 220
L + +A A G +YL + I+RD+ N LL G G K+ DFG+A
Sbjct: 134 PSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
Query: 221 KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ M + PE M G T K+D +SFGV+L EI +
Sbjct: 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 11/197 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFL-VEVLMLSLLHHPNLVNLIGYC 135
+G+G FG V+KG T QVVAIK +D + E + E+ +LS + G
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
G + ++ EY+ GS D L P D+ ++ T ++ KGL+YLH + I
Sbjct: 91 LKGSKLWIIMEYLGGGSALDLLRAGPFDEFQI--ATMLK---EILKGLDYLHSEKK---I 142
Query: 196 YRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLK 255
+RD+K +N+LL E KL+DFG+A G + D +GT + APE K
Sbjct: 143 HRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSK 200
Query: 256 SDVYSFGVVLLEIITGR 272
+D++S G+ +E+ G
Sbjct: 201 ADIWSLGITAIELAKGE 217
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F V R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P V L D ++ Y G L ++ + D T A LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEY 147
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
SD+++ G ++ +++ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F V R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P V L D ++ Y G L ++ + D T A LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEY 145
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
SD+++ G ++ +++ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 101/220 (45%), Gaps = 14/220 (6%)
Query: 55 AAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQV---VAIKQLDRNGLQ-GN 110
A +FT RE+ A + ++G G G V GRL Q VAIK L +
Sbjct: 38 AGRSFT-REIEA--SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR 94
Query: 111 REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWT 170
R+FL E ++ HPN++ L G G ++V EYM GSL+ L +
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 171 TRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK-LGPVGDKT 229
+R G G+ YL D ++RDL N+L+ K+SDFGL++ L D
Sbjct: 155 GMLR---GVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208
Query: 230 HVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEII 269
+ +T + APE + SDV+SFGVV+ E++
Sbjct: 209 YTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Query: 54 IAAHTFTFRELAAVT-KNFRADCLLGEGGFGRVYKGRL-----ESTNQVVAIKQL-DRNG 106
A T + +L V KN LG G FG VY+G++ + + VA+K L +
Sbjct: 14 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 73
Query: 107 LQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDL---PPD 163
Q +FL+E L++S +H N+V IG R ++ E M G L+ L + P
Sbjct: 74 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 133
Query: 164 KKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLA 220
L + +A A G +YL + I+RD+ N LL G G K+ DFG+A
Sbjct: 134 PSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
Query: 221 KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ M + PE M G T K+D +SFGV+L EI +
Sbjct: 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F V R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P V L D ++ Y G L ++ + D T A LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEY 145
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
SD+++ G ++ +++ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Query: 54 IAAHTFTFRELAAVT-KNFRADCLLGEGGFGRVYKGRL-----ESTNQVVAIKQL-DRNG 106
A T + +L V KN LG G FG VY+G++ + + VA+K L +
Sbjct: 41 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 100
Query: 107 LQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDL---PPD 163
Q +FL+E L++S +H N+V IG R ++ E M G L+ L + P
Sbjct: 101 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 160
Query: 164 KKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLA 220
L + +A A G +YL + I+RD+ N LL G G K+ DFG+A
Sbjct: 161 PSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 217
Query: 221 KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ M + PE M G T K+D +SFGV+L EI +
Sbjct: 218 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F V R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P V L D ++ Y G L ++ + D T A LEY
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEY 148
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
SD+++ G ++ +++ G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Query: 54 IAAHTFTFRELAAVT-KNFRADCLLGEGGFGRVYKGRL-----ESTNQVVAIKQL-DRNG 106
A T + +L V KN LG G FG VY+G++ + + VA+K L +
Sbjct: 15 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 74
Query: 107 LQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDL---PPD 163
Q +FL+E L++S +H N+V IG R ++ E M G L+ L + P
Sbjct: 75 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 134
Query: 164 KKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLA 220
L + +A A G +YL + I+RD+ N LL G G K+ DFG+A
Sbjct: 135 PSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 221 KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ M + PE M G T K+D +SFGV+L EI +
Sbjct: 192 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F V R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P V L D ++ Y G L ++ + D T A LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEY 147
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
SD+++ G ++ +++ G
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F V R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P V L D ++ Y G L ++ + D T A LEY
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEY 150
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +PE
Sbjct: 151 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
SD+++ G ++ +++ G
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F V R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P V L D ++ Y G L ++ + D T A LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEY 147
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
SD+++ G ++ +++ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 77 LGEGGFGRVYKGRLEST-----NQVVAIKQLDRNGLQGNR-EFLVEVLMLSLLHHPNLVN 130
LG+G FG VY+G + VAIK ++ R EFL E ++ + ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRL------DWTTRMRIAAGAAKGLE 184
L+G + G L++ E M G L+ +L L P+ + + +++A A G+
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
YL+ AN ++RDL N ++ E + K+ DFG+ + D + + + +P
Sbjct: 147 YLN--AN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 203
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIIT 270
E G T SDV+SFGVVL EI T
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Query: 54 IAAHTFTFRELAAVT-KNFRADCLLGEGGFGRVYKGRL-----ESTNQVVAIKQL-DRNG 106
A T + +L V KN LG G FG VY+G++ + + VA+K L +
Sbjct: 21 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 80
Query: 107 LQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDL---PPD 163
Q +FL+E L++S +H N+V IG R ++ E M G L+ L + P
Sbjct: 81 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 140
Query: 164 KKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLA 220
L + +A A G +YL + I+RD+ N LL G G K+ DFG+A
Sbjct: 141 PSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 197
Query: 221 KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ M + PE M G T K+D +SFGV+L EI +
Sbjct: 198 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Query: 54 IAAHTFTFRELAAVT-KNFRADCLLGEGGFGRVYKGRL-----ESTNQVVAIKQL-DRNG 106
A T + +L V KN LG G FG VY+G++ + + VA+K L +
Sbjct: 31 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 90
Query: 107 LQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDL---PPD 163
Q +FL+E L++S +H N+V IG R ++ E M G L+ L + P
Sbjct: 91 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 150
Query: 164 KKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLA 220
L + +A A G +YL + I+RD+ N LL G G K+ DFG+A
Sbjct: 151 PSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 207
Query: 221 KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ M + PE M G T K+D +SFGV+L EI +
Sbjct: 208 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Query: 54 IAAHTFTFRELAAVT-KNFRADCLLGEGGFGRVYKGRL-----ESTNQVVAIKQL-DRNG 106
A T + +L V KN LG G FG VY+G++ + + VA+K L +
Sbjct: 29 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 88
Query: 107 LQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDL---PPD 163
Q +FL+E L++S +H N+V IG R ++ E M G L+ L + P
Sbjct: 89 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQ 148
Query: 164 KKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLA 220
L + +A A G +YL + I+RD+ N LL G G K+ DFG+A
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
Query: 221 KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ M + PE M G T K+D +SFGV+L EI +
Sbjct: 206 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F V R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P V L D ++ Y G L ++ + D T A LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEY 147
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
SD+++ G ++ +++ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F V R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P V L D ++ Y G L ++ + D T A LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEY 147
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
SD+++ G ++ +++ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Query: 54 IAAHTFTFRELAAVT-KNFRADCLLGEGGFGRVYKGRL-----ESTNQVVAIKQL-DRNG 106
A T + +L V KN LG G FG VY+G++ + + VA+K L +
Sbjct: 6 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 65
Query: 107 LQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDL---PPD 163
Q +FL+E L++S +H N+V IG R ++ E M G L+ L + P
Sbjct: 66 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 125
Query: 164 KKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLA 220
L + +A A G +YL + I+RD+ N LL G G K+ DFG+A
Sbjct: 126 PSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 182
Query: 221 KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ M + PE M G T K+D +SFGV+L EI +
Sbjct: 183 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 77 LGEGGFGRVYKGRLEST-----NQVVAIKQLDRNGLQGNR-EFLVEVLMLSLLHHPNLVN 130
LG+G FG VY+G + VAIK ++ R EFL E ++ + ++V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRL------DWTTRMRIAAGAAKGLE 184
L+G + G L++ E M G L+ +L L P+ + + +++A A G+
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
YL+ AN ++RDL N ++ E + K+ DFG+ + D + + + +P
Sbjct: 138 YLN--AN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 194
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIIT 270
E G T SDV+SFGVVL EI T
Sbjct: 195 ESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 76 LLGEGGFGRVYKGRLESTNQ---VVAIKQLDRNGL--QGNREFLVEVLMLSLLHHPNLVN 130
++G G FG V +GRL++ + VAIK L + G + REFL E ++ HPN++
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L G + +++ E+M G+L+ L + + + + G A G+ YL + +
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLR---LNDGQFTVIQLVGMLRGIASGMRYLAEMS 138
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMG---TYGYCAPEYA 247
++RDL NIL+ K+SDFGL++ T +G + APE
Sbjct: 139 ---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ T SD +S+G+V+ E+++
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Query: 54 IAAHTFTFRELAAVT-KNFRADCLLGEGGFGRVYKGRL-----ESTNQVVAIKQL-DRNG 106
A T + +L V KN LG G FG VY+G++ + + VA+K L +
Sbjct: 29 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYS 88
Query: 107 LQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDL---PPD 163
Q +FL+E L++S +H N+V IG R ++ E M G L+ L + P
Sbjct: 89 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 148
Query: 164 KKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLA 220
L + +A A G +YL + I+RD+ N LL G G K+ DFG+A
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
Query: 221 KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ M + PE M G T K+D +SFGV+L EI +
Sbjct: 206 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 13/196 (6%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V+ +V A+K + + G FL E ++ L H LV L
Sbjct: 23 LGAGQFGEVWMATYNKHTKV-AVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ E+M GSL D L K+ L + +A A+G+ ++ + I+
Sbjct: 81 K-EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRN---YIH 134
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYAMTGQLTL 254
RDL+ +NIL+ K++DFGLA+ V + + R + + APE G T+
Sbjct: 135 RDLRAANILVSASLVCKIADFGLAR---VIEDNEYTAREGAKFPIKWTAPEAINFGSFTI 191
Query: 255 KSDVYSFGVVLLEIIT 270
KSDV+SFG++L+EI+T
Sbjct: 192 KSDVWSFGILLMEIVT 207
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F V R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P V L D ++ Y G L ++ + D T A LEY
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEY 129
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +PE
Sbjct: 130 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
SD+++ G ++ +++ G
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 119/284 (41%), Gaps = 37/284 (13%)
Query: 77 LGEGGFGRVYKGRLE-----STNQVVAIKQLDRNG-LQGNREFLVEVLMLSLLHHPNLVN 130
LG+G FG VY+G VA+K ++ + L+ EFL E ++ ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKR------LDWTTRMRIAAGAAKGLE 184
L+G + G L+V E M G L+ +L L P+ + +++AA A G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
YL+ K ++RDL N ++ + K+ DFG+ + D + + + AP
Sbjct: 142 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMA 304
E G T SD++SFGVVL EI + + G N Q+
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSN---------------EQVL 239
Query: 305 DPTLQGQY---PVRGLYQALAVAAMCVQEQPNMRPLIADVVTAL 345
+ G Y P + + MC Q P MRP ++V L
Sbjct: 240 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 105/230 (45%), Gaps = 26/230 (11%)
Query: 59 FTFRELAAVTKNF---------RADCLLGEGGFGRVYKGRLESTNQ---VVAIKQLDRNG 106
FTF + + F + + ++G G FG V G L+ + VAIK L
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 107 LQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKK 165
+ R +FL E ++ HPN+++L G +++ E+M GSL+ L
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 166 RLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPV 225
+ +R G A G++YL D ++RDL NIL+ K+SDFGL++ +
Sbjct: 134 VIQLVGMLR---GIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRF--L 185
Query: 226 GDKTHVSTRVMGTYG-----YCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
D T T G + APE + T SDV+S+G+V+ E+++
Sbjct: 186 EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 16/212 (7%)
Query: 69 KNFRADCL-----LGEGGFGRVYKGRLESTNQ---VVAIKQLDRNGL-QGNREFLVEVLM 119
K A C+ +G G FG V GRL+ + VAIK L + R+FL E +
Sbjct: 3 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 62
Query: 120 LSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGA 179
+ HPN+++L G +++ EYM GSL+ L + R + + G
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK---NDGRFTVIQLVGMLRGI 119
Query: 180 AKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT- 238
G++YL D + ++RDL NIL+ K+SDFG++++ + +TR
Sbjct: 120 GSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 176
Query: 239 YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ APE + T SDV+S+G+V+ E+++
Sbjct: 177 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 119/284 (41%), Gaps = 37/284 (13%)
Query: 77 LGEGGFGRVYKGRLE-----STNQVVAIKQLDRNG-LQGNREFLVEVLMLSLLHHPNLVN 130
LG+G FG VY+G VA+K ++ + L+ EFL E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKR------LDWTTRMRIAAGAAKGLE 184
L+G + G L+V E M G L+ +L L P+ + +++AA A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
YL+ K ++RDL N ++ + K+ DFG+ + D + + + AP
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMA 304
E G T SD++SFGVVL EI + + G N Q+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSN---------------EQVL 242
Query: 305 DPTLQGQY---PVRGLYQALAVAAMCVQEQPNMRPLIADVVTAL 345
+ G Y P + + MC Q P MRP ++V L
Sbjct: 243 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Query: 54 IAAHTFTFRELAAVT-KNFRADCLLGEGGFGRVYKGRL-----ESTNQVVAIKQL-DRNG 106
A T + +L V KN LG G FG VY+G++ + + VA+K L +
Sbjct: 15 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 74
Query: 107 LQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDL---PPD 163
Q +FL+E L++S +H N+V IG R ++ E M G L+ L + P
Sbjct: 75 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 134
Query: 164 KKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLA 220
L + +A A G +YL + I+RD+ N LL G G K+ DFG+A
Sbjct: 135 PSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 221 KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ M + PE M G T K+D +SFGV+L EI +
Sbjct: 192 QDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 19/194 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V+ +V A+K + + G FL E ++ L H LV L
Sbjct: 190 LGAGQFGEVWMATYNKHTKV-AVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ E+M GSL D L K+ L + +A A+G+ ++ + I+
Sbjct: 248 K-EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRN---YIH 301
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL+ +NIL+ K++DFGLA+ VG K + + APE G T+KS
Sbjct: 302 RDLRAANILVSASLVCKIADFGLAR---VGAKFPIK--------WTAPEAINFGSFTIKS 350
Query: 257 DVYSFGVVLLEIIT 270
DV+SFG++L+EI+T
Sbjct: 351 DVWSFGILLMEIVT 364
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Query: 54 IAAHTFTFRELAAVT-KNFRADCLLGEGGFGRVYKGRL-----ESTNQVVAIKQL-DRNG 106
A T + +L V KN LG G FG VY+G++ + + VA+K L +
Sbjct: 55 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 114
Query: 107 LQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDL---PPD 163
Q +FL+E L++S +H N+V IG R ++ E M G L+ L + P
Sbjct: 115 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 174
Query: 164 KKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLA 220
L + +A A G +YL + I+RD+ N LL G G K+ DFG+A
Sbjct: 175 PSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231
Query: 221 KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ M + PE M G T K+D +SFGV+L EI +
Sbjct: 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F V R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P V L D ++ Y G L ++ + D T A LEY
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEY 144
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +PE
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
SD+++ G ++ +++ G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 11/225 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGN---REFLVEVLMLSLLHH 125
++F+ LLG+G F VY+ T VAIK +D+ + + EV + L H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P+++ L Y D + LV E G + +L + K G+ Y
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN---RVKPFSENEARHFMHQIITGMLY 127
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH +++RDL SN+LL + K++DFGLA + + H + + GT Y +PE
Sbjct: 128 LHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPE 182
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWA 290
A L+SDV+S G + ++ GR D N V A
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 34/220 (15%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQV--VAIKQLDRNGLQGN-REFLVEVLMLSLL-HHPN 127
LGEG FG+V + N+V VA+K L + + + + + E+ M+ ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPP------------DKKRLDWTTRMRI 175
++NL+G C ++ EY G+L ++L P +++L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A A+G+EYL A+ I+RDL N+L+ E K++DFGLA+ D H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDXXK 207
Query: 236 MGTYG-----YCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
T G + APE T +SDV+SFGV+L EI T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F V R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P V L D ++ Y G L ++ + D T A LEY
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEY 144
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +PE
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
SD+++ G ++ +++ G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Query: 54 IAAHTFTFRELAAVT-KNFRADCLLGEGGFGRVYKGRL-----ESTNQVVAIKQL-DRNG 106
A T + +L V KN LG G FG VY+G++ + + VA+K L +
Sbjct: 32 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 91
Query: 107 LQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDL---PPD 163
Q +FL+E L++S +H N+V IG R ++ E M G L+ L + P
Sbjct: 92 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 151
Query: 164 KKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLA 220
L + +A A G +YL + I+RD+ N LL G G K+ DFG+A
Sbjct: 152 PSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 208
Query: 221 KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ M + PE M G T K+D +SFGV+L EI +
Sbjct: 209 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 98/205 (47%), Gaps = 17/205 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNRE-FLVEVLMLSLLHHPNLVNL---- 131
LG GGFG V + + T + VAIKQ + NRE + +E+ ++ L+HPN+V+
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 132 --IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
+ A D LL EY G L +L+ + R + + + L YLH+
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT-LLSDISSALRYLHEN 140
Query: 190 ANPPVIYRDLKCSNILLGEGYHP---KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+I+RDLK NI+L G K+ D G AK D+ + T +GT Y APE
Sbjct: 141 R---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYLAPEL 194
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
+ T+ D +SFG + E ITG
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 76 LLGEGGFGRVYKGRLESTNQ---VVAIKQLDRNGL--QGNREFLVEVLMLSLLHHPNLVN 130
++G G FG V +GRL++ + VAIK L + G + REFL E ++ HPN++
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L G + +++ E+M G+L+ L + +R G A G+ YL + +
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYLAEMS 136
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMG---TYGYCAPEYA 247
++RDL NIL+ K+SDFGL++ T +G + APE
Sbjct: 137 ---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ T SD +S+G+V+ E+++
Sbjct: 194 AFRKFTSASDAWSYGIVMWEVMS 216
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 133/290 (45%), Gaps = 39/290 (13%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV------EVLMLSLLHHPNLV 129
L+GEG +G V K R + T ++VAIK+ L+ + + +V E+ +L L H NLV
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKF----LESDDDKMVKKIAMREIKLLKQLRHENLV 87
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDH--LHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
NL+ C + LV+E++ DH L DL LD+ + G+ + H
Sbjct: 88 NLLEVCKKKKRWYLVFEFV------DHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH 141
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK-LGPVGDKTHVSTRVMGTYGYCAPEY 246
+I+RD+K NIL+ + KL DFG A+ L G+ V + T Y APE
Sbjct: 142 SHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE---VYDDEVATRWYRAPEL 195
Query: 247 AMTGQLTLKS-DVYSFGVVLLEIITGRKAI--DNTRAAGEH------NLVAWARPLFKDR 297
+ K+ DV++ G ++ E+ G D+ H NL+ + LF
Sbjct: 196 LVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN 255
Query: 298 RKFSQMADPTLQGQYPVRGLYQALA-----VAAMCVQEQPNMRPLIADVV 342
F+ + P ++ + P+ Y L+ +A C+ P+ RP A+++
Sbjct: 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELL 305
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 98/205 (47%), Gaps = 17/205 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNRE-FLVEVLMLSLLHHPNLVNL---- 131
LG GGFG V + + T + VAIKQ + NRE + +E+ ++ L+HPN+V+
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 132 --IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
+ A D LL EY G L +L+ + R + + + L YLH+
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT-LLSDISSALRYLHEN 141
Query: 190 ANPPVIYRDLKCSNILLGEGYHP---KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+I+RDLK NI+L G K+ D G AK D+ + T +GT Y APE
Sbjct: 142 R---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYLAPEL 195
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
+ T+ D +SFG + E ITG
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 55 AAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLEST-----NQVVAIKQLDRNGLQG 109
AA F E + LG+G FG VY+G + VAIK ++
Sbjct: 2 AADVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 61
Query: 110 NR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRL- 167
R EFL E ++ + ++V L+G + G L++ E M G L+ +L L P+ +
Sbjct: 62 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 168 -----DWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKL 222
+ +++A A G+ YL+ AN ++RDL N ++ E + K+ DFG+ +
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLN--AN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 178
Query: 223 GPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
D + + + +PE G T SDV+SFGVVL EI T
Sbjct: 179 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 100/220 (45%), Gaps = 14/220 (6%)
Query: 55 AAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQV---VAIKQLDRNGLQ-GN 110
A +FT RE+ A + ++G G G V GRL Q VAIK L +
Sbjct: 38 AGRSFT-REIEA--SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR 94
Query: 111 REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWT 170
R+FL E ++ HPN++ L G G ++V EYM GSL+ L +
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 171 TRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK-LGPVGDKT 229
+R G G+ YL D ++RDL N+L+ K+SDFGL++ L D
Sbjct: 155 GMLR---GVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208
Query: 230 HVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEII 269
+T + APE + SDV+SFGVV+ E++
Sbjct: 209 XTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 16/207 (7%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + E VA+K L +E L+ L M L H N+V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLH-----DLPPDKKR-LDWTTRMRIAAGAAKGL 183
NL+G C G L++ EY G L + L DL + R L+ + ++ A+G+
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 184 EYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCA 243
+L A+ I+RD+ N+LL G+ K+ DFGLA+ V + A
Sbjct: 166 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 222
Query: 244 PEYAMTGQLTLKSDVYSFGVVLLEIIT 270
PE T++SDV+S+G++L EI +
Sbjct: 223 PESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 34/220 (15%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQV--VAIKQLDRNGLQGN-REFLVEVLMLSLL-HHPN 127
LGEG FG+V + N+V VA+K L + + + + + E+ M+ ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPP------------DKKRLDWTTRMRI 175
++NL+G C ++ EY G+L ++L P +++L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A A+G+EYL A+ I+RDL N+L+ E K++DFGLA+ D H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 236 MGTYG-----YCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
T G + APE T +SDV+SFGV+L EI T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 16/207 (7%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + E VA+K L +E L+ L M L H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLH-----DLPPDKKR-LDWTTRMRIAAGAAKGL 183
NL+G C G L++ EY G L + L DL + R L+ + ++ A+G+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 184 EYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCA 243
+L A+ I+RD+ N+LL G+ K+ DFGLA+ V + A
Sbjct: 174 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 230
Query: 244 PEYAMTGQLTLKSDVYSFGVVLLEIIT 270
PE T++SDV+S+G++L EI +
Sbjct: 231 PESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR---EFLVEVLMLSLLHHPNLVNLIG 133
LG G FG+V G+ E T VA+K L+R ++ + E+ L L HP+++ L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
+ +V EY+ G L D++ RLD R+ G++Y H
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYI----CKNGRLDEKESRRLFQQILSGVDYCHRHM--- 136
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
V++RDLK N+LL + K++DFGL+ + G+ S G+ Y APE ++G+L
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPE-VISGRLY 192
Query: 254 L--KSDVYSFGVVLLEIITGRKAIDN 277
+ D++S GV+L ++ G D+
Sbjct: 193 AGPEVDIWSSGVILYALLCGTLPFDD 218
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 13/196 (6%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V+ +V A+K + + G FL E ++ L H LV L
Sbjct: 196 LGAGQFGEVWMATYNKHTKV-AVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ E+M GSL D L K+ L + +A A+G+ ++ + I+
Sbjct: 254 K-EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRN---YIH 307
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYAMTGQLTL 254
RDL+ +NIL+ K++DFGLA+ V + + R + + APE G T+
Sbjct: 308 RDLRAANILVSASLVCKIADFGLAR---VIEDNEYTAREGAKFPIKWTAPEAINFGSFTI 364
Query: 255 KSDVYSFGVVLLEIIT 270
KSDV+SFG++L+EI+T
Sbjct: 365 KSDVWSFGILLMEIVT 380
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 34/220 (15%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQV--VAIKQLDRNGLQGN-REFLVEVLMLSLL-HHPN 127
LGEG FG+V + N+V VA+K L + + + + + E+ M+ ++ H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPP------------DKKRLDWTTRMRI 175
++NL+G C ++ EY G+L ++L P +++L +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A A+G+EYL A+ I+RDL N+L+ E K++DFGLA+ D H+
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 192
Query: 236 MGTYG-----YCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
T G + APE T +SDV+SFGV+L EI T
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 34/220 (15%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQV--VAIKQLDRNGLQGN-REFLVEVLMLSLL-HHPN 127
LGEG FG+V + N+V VA+K L + + + + + E+ M+ ++ H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPP------------DKKRLDWTTRMRI 175
++NL+G C ++ EY G+L ++L P +++L +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A A+G+EYL A+ I+RDL N+L+ E K++DFGLA+ D H+
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 200
Query: 236 MGTYG-----YCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
T G + APE T +SDV+SFGV+L EI T
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 34/220 (15%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQV--VAIKQLDRNGLQGN-REFLVEVLMLSLL-HHPN 127
LGEG FG+V + N+V VA+K L + + + + + E+ M+ ++ H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPP------------DKKRLDWTTRMRI 175
++NL+G C ++ EY G+L ++L P +++L +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A A+G+EYL A+ I+RDL N+L+ E K++DFGLA+ D H+
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 196
Query: 236 MGTYG-----YCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
T G + APE T +SDV+SFGV+L EI T
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 10/206 (4%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV--EVLMLSLLHH 125
++F+ +LGEG F R +T++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
P V L D ++ Y G L ++ + D T A LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEY 145
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
LH K +I+RDLK NILL E H +++DFG AK+ K + +GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
SD+++ G ++ +++ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 67 VTKN-FRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSL 122
VT N F LLG+G FG+V + ++T + A+K L + + E L E +L
Sbjct: 145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 204
Query: 123 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRI-AAGAAK 181
HP L L D+ V EY G L HL ++R+ R R A
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVS 259
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
L+YLH + N V+YRDLK N++L + H K++DFGL K G + D + T GT Y
Sbjct: 260 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKT-FCGTPEY 315
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIITGR 272
APE D + GVV+ E++ GR
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 34/220 (15%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQV--VAIKQLDRNGLQGN-REFLVEVLMLSLL-HHPN 127
LGEG FG+V + N+V VA+K L + + + + + E+ M+ ++ H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPP------------DKKRLDWTTRMRI 175
++NL+G C ++ EY G+L ++L P +++L +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A A+G+EYL A+ I+RDL N+L+ E K++DFGLA+ D H+
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 199
Query: 236 MGTYG-----YCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
T G + APE T +SDV+SFGV+L EI T
Sbjct: 200 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 34/220 (15%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQV--VAIKQLDRNGLQGN-REFLVEVLMLSLL-HHPN 127
LGEG FG+V + N+V VA+K L + + + + + E+ M+ ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPP------------DKKRLDWTTRMRI 175
++NL+G C ++ EY G+L ++L P +++L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A A+G+EYL A+ I+RDL N+L+ E K++DFGLA+ D H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 236 MGTYG-----YCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
T G + APE T +SDV+SFGV+L EI T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 67 VTKN-FRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSL 122
VT N F LLG+G FG+V + ++T + A+K L + + E L E +L
Sbjct: 148 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 123 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRI-AAGAAK 181
HP L L D+ V EY G L HL ++R+ R R A
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVS 262
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
L+YLH + N V+YRDLK N++L + H K++DFGL K G + D + T GT Y
Sbjct: 263 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKT-FCGTPEY 318
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIITGR 272
APE D + GVV+ E++ GR
Sbjct: 319 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 138/306 (45%), Gaps = 36/306 (11%)
Query: 77 LGEGGFGRVYKGRLESTNQ-------VVAIKQLDRNGLQGNREFLV-EVLMLSLL-HHPN 127
LGEG FG+V ++ VA+K L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPP------------DKKRLDWTTRMRI 175
++NL+G C ++ EY G+L ++L P ++++ + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A+G+EYL A+ I+RDL N+L+ E K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFK 295
+ APE T +SDV+SFGV++ EI T + + G V L K
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIP--VEELFKLLK 273
Query: 296 DRRKFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYLACQKYDP 355
+ + + A+ T + +R + A+ ++P + L+ D+ LT ++Y
Sbjct: 274 EGHRMDKPANCTNELYMMMRDCWHAVP------SQRPTFKQLVEDLDRILTLTTNEEYLD 327
Query: 356 ESQPVQ 361
SQP++
Sbjct: 328 LSQPLE 333
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 138/306 (45%), Gaps = 36/306 (11%)
Query: 77 LGEGGFGRVYKGRLESTNQ-------VVAIKQLDRNGLQGNREFLV-EVLMLSLL-HHPN 127
LGEG FG+V ++ VA+K L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPP------------DKKRLDWTTRMRI 175
++NL+G C ++ EY G+L ++L P ++++ + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A+G+EYL A+ I+RDL N+L+ E K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFK 295
+ APE T +SDV+SFGV++ EI T + + G V L K
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIP--VEELFKLLK 273
Query: 296 DRRKFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYLACQKYDP 355
+ + + A+ T + +R + A+ ++P + L+ D+ LT ++Y
Sbjct: 274 EGHRMDKPANCTNELYMMMRDCWHAVP------SQRPTFKQLVEDLDRILTLTTNEEYLD 327
Query: 356 ESQPVQ 361
SQP++
Sbjct: 328 LSQPLE 333
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 120/284 (42%), Gaps = 37/284 (13%)
Query: 77 LGEGGFGRVYKGRLE-----STNQVVAIKQLDRNG-LQGNREFLVEVLMLSLLHHPNLVN 130
LG+G FG VY+G VA+K ++ + L+ EFL E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKR------LDWTTRMRIAAGAAKGLE 184
L+G + G L+V E M G L+ +L L P+ + +++AA A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
YL+ K ++R+L N ++ + K+ DFG+ + D + + + AP
Sbjct: 145 YLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMA 304
E G T SD++SFGVVL EI + + G N Q+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSN---------------EQVL 242
Query: 305 DPTLQGQY---PVRGLYQALAVAAMCVQEQPNMRPLIADVVTAL 345
+ G Y P + + MC Q PNMRP ++V L
Sbjct: 243 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 120/284 (42%), Gaps = 37/284 (13%)
Query: 77 LGEGGFGRVYKGRLE-----STNQVVAIKQLDRNG-LQGNREFLVEVLMLSLLHHPNLVN 130
LG+G FG VY+G VA+K ++ + L+ EFL E ++ ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKR------LDWTTRMRIAAGAAKGLE 184
L+G + G L+V E M G L+ +L L P+ + +++AA A G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
YL+ K ++R+L N ++ + K+ DFG+ + D + + + AP
Sbjct: 146 YLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMA 304
E G T SD++SFGVVL EI + + G N Q+
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSN---------------EQVL 243
Query: 305 DPTLQGQY---PVRGLYQALAVAAMCVQEQPNMRPLIADVVTAL 345
+ G Y P + + MC Q PNMRP ++V L
Sbjct: 244 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 34/220 (15%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQV--VAIKQLDRNGLQGN-REFLVEVLMLSLL-HHPN 127
LGEG FG+V + N+V VA+K L + + + + + E+ M+ ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPP------------DKKRLDWTTRMRI 175
++NL+G C ++ EY G+L ++L P +++L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A A+G+EYL A+ I+RDL N+L+ E K++DFGLA+ D H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 236 MGTYG-----YCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
T G + APE T +SDV+SFGV+L EI T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 77 LGEGGFGRVYKGRLEST-----NQVVAIKQLDRNGLQGNR-EFLVEVLMLSLLHHPNLVN 130
LG+G FG VY+G + VAIK ++ R EFL E ++ + ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRL------DWTTRMRIAAGAAKGLE 184
L+G + G L++ E M G L+ +L L P+ + + +++A A G+
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
YL+ AN ++RDL N ++ E + K+ DFG+ + D + + + +P
Sbjct: 147 YLN--AN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 203
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIIT 270
E G T SDV+SFGVVL EI T
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 77 LGEGGFGRVYKGRLEST-----NQVVAIKQLDRNGLQGNR-EFLVEVLMLSLLHHPNLVN 130
LG+G FG VY+G + VAIK ++ R EFL E ++ + ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRL------DWTTRMRIAAGAAKGLE 184
L+G + G L++ E M G L+ +L L P+ + + +++A A G+
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
YL+ AN ++RDL N ++ E + K+ DFG+ + D + + + +P
Sbjct: 146 YLN--AN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIIT 270
E G T SDV+SFGVVL EI T
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 101/211 (47%), Gaps = 26/211 (12%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLL-HHPNLVNLIGY 134
L+G G +G+VYKGR T Q+ AIK +D G + E E+ ML HH N+ G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 135 CAD------GDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
DQ LV E+ GS+ D + + + + +W I +GL +LH
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA--YICREILRGLSHLHQ 147
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGL-AKLGPVGDKTHVSTR--VMGTYGYCAPE 245
VI+RD+K N+LL E KL DFG+ A+L D+T V R +GT + APE
Sbjct: 148 HK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQL----DRT-VGRRNTFIGTPYWMAPE 199
Query: 246 YAMTGQ-----LTLKSDVYSFGVVLLEIITG 271
+ KSD++S G+ +E+ G
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 77 LGEGGFGRVYKGRLEST-----NQVVAIKQLDRNGLQGNR-EFLVEVLMLSLLHHPNLVN 130
LG+G FG VY+G + VAIK ++ R EFL E ++ + ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRL------DWTTRMRIAAGAAKGLE 184
L+G + G L++ E M G L+ +L L P+ + + +++A A G+
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
YL+ AN ++RDL N ++ E + K+ DFG+ + D + + + +P
Sbjct: 146 YLN--AN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIIT 270
E G T SDV+SFGVVL EI T
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 98/214 (45%), Gaps = 14/214 (6%)
Query: 64 LAAVTKN-FRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLM 119
+A VT N F LLG+G FG+V + ++T + A+K L + + E L E +
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 62
Query: 120 LSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRI-AAG 178
L HP L L D+ V EY G L HL ++R+ R R A
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAE 117
Query: 179 AAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
L+YLH + N V+YRDLK N++L + H K++DFGL K G T GT
Sbjct: 118 IVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGT 173
Query: 239 YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGR 272
Y APE D + GVV+ E++ GR
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 119/284 (41%), Gaps = 37/284 (13%)
Query: 77 LGEGGFGRVYKGRLE-----STNQVVAIKQLDRNG-LQGNREFLVEVLMLSLLHHPNLVN 130
LG+G FG VY+G VA+K ++ + L+ EFL E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKR------LDWTTRMRIAAGAAKGLE 184
L+G + G L+V E M G L+ +L L P+ + +++AA A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
YL+ K ++RDL N ++ + K+ DFG+ + D + + + AP
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMA 304
E G T SD++SFGVVL EI + + G N Q+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSN---------------EQVL 242
Query: 305 DPTLQGQY---PVRGLYQALAVAAMCVQEQPNMRPLIADVVTAL 345
+ G Y P + + MC Q P MRP ++V L
Sbjct: 243 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 105/220 (47%), Gaps = 34/220 (15%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQV--VAIKQLDRNGLQGN-REFLVEVLMLSLL-HHPN 127
LGEG FG+V + N+V VA+K L + + + + + E+ M+ ++ H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPP------------DKKRLDWTTRMRI 175
++NL+G C ++ EY G+L ++L P +++L +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A A+G+EYL K I+RDL N+L+ E K++DFGLA+ D H+
Sbjct: 197 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 248
Query: 236 MGTYG-----YCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
T G + APE T +SDV+SFGV+L EI T
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 77 LGEGGFGRVYKGRLEST-----NQVVAIKQLDRNGLQGNR-EFLVEVLMLSLLHHPNLVN 130
LG+G FG VY+G + VAIK ++ R EFL E ++ + ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRL------DWTTRMRIAAGAAKGLE 184
L+G + G L++ E M G L+ +L L P+ + + +++A A G+
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
YL+ AN ++RDL N ++ E + K+ DFG+ + D + + + +P
Sbjct: 140 YLN--AN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIIT 270
E G T SDV+SFGVVL EI T
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 77 LGEGGFGRVYKGRLEST-----NQVVAIKQLDRNGLQGNR-EFLVEVLMLSLLHHPNLVN 130
LG+G FG VY+G + VAIK ++ R EFL E ++ + ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKR------LDWTTRMRIAAGAAKGLE 184
L+G + G L++ E M G L+ +L L P+ + + +++A A G+
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
YL+ AN ++RDL N ++ E + K+ DFG+ + D + + + +P
Sbjct: 153 YLN--AN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIIT 270
E G T SDV+SFGVVL EI T
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 96/209 (45%), Gaps = 14/209 (6%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQ---VVAIKQLDRNGL---QGNREFLVEVLMLSL 122
K+ R LG+G FG V +G ++ + VA+K L + L + +F+ EV +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 123 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKG 182
L H NL+ L G ++ V E PLGSL D L + T R A A+G
Sbjct: 72 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEG 127
Query: 183 LEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT-YGY 241
+ YL K I+RDL N+LL K+ DFGL + P D +V + +
Sbjct: 128 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
CAPE T + SD + FGV L E+ T
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 16/202 (7%)
Query: 75 CLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQG--NREFLVEVLMLSLLHHPNLVNLI 132
C+LG+G FG V K + T Q A+K +++ + L EV +L L HPN++ L
Sbjct: 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
D +V E G L D + +KR RI G+ Y+H K N
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEI----IKRKRFSEHDAARIIKQVFSGITYMH-KHN- 141
Query: 193 PVIYRDLKCSNILLGEGYHP---KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMT 249
+++RDLK NILL K+ DFGL+ T + R+ GT Y APE +
Sbjct: 142 -IVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQNTKMKDRI-GTAYYIAPE-VLR 196
Query: 250 GQLTLKSDVYSFGVVLLEIITG 271
G K DV+S GV+L +++G
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 99/213 (46%), Gaps = 15/213 (7%)
Query: 65 AAVTKN-FRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLML 120
A VT N F LLG+G FG+V R ++T + A+K L + + E + E +L
Sbjct: 3 AKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 62
Query: 121 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRI-AAGA 179
HP L L D+ V EY G L HL ++R+ R R A
Sbjct: 63 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEI 117
Query: 180 AKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY 239
LEYLH + V+YRD+K N++L + H K++DFGL K G + D + T GT
Sbjct: 118 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKT-FCGTP 172
Query: 240 GYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGR 272
Y APE D + GVV+ E++ GR
Sbjct: 173 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 77 LGEGGFGRVYKGRLEST-----NQVVAIKQLDRNGLQGNR-EFLVEVLMLSLLHHPNLVN 130
LG+G FG VY+G + VAIK ++ R EFL E ++ + ++V
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRL------DWTTRMRIAAGAAKGLE 184
L+G + G L++ E M G L+ +L L P+ + + +++A A G+
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
YL+ AN ++RDL N ++ E + K+ DFG+ + D + + + +P
Sbjct: 175 YLN--AN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 231
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIIT 270
E G T SDV+SFGVVL EI T
Sbjct: 232 ESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 111/210 (52%), Gaps = 23/210 (10%)
Query: 73 ADCLLGEGGFGRVYKGRL--ESTNQV-VAIKQLDR-NGLQGNREFLVEVLMLSLLHHPNL 128
+D ++G+G FG VY G ++ N++ AIK L R +Q FL E L++ L+HPN+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 129 VNLIGYC--ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG--AAKGLE 184
+ LIG +G +L+ YM G L + P + T + I+ G A+G+E
Sbjct: 85 LALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRS--PQRNP---TVKDLISFGLQVARGME 138
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR----VMGTYG 240
YL A ++RDL N +L E + K++DFGLA+ + D+ + S +
Sbjct: 139 YL---AEQKFVHRDLAARNCMLDESFTVKVADFGLAR--DILDREYYSVQQHRHARLPVK 193
Query: 241 YCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ A E T + T KSDV+SFGV+L E++T
Sbjct: 194 WTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 38/227 (16%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVE--VLMLSLLHHPN 127
N + L+G G +G VYKG L+ + VA+K + F+ E + + L+ H N
Sbjct: 14 NLKLLELIGRGRYGAVYKGSLDE--RPVAVKVF---SFANRQNFINEKNIYRVPLMEHDN 68
Query: 128 LVNLI----GYCADGD-QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKG 182
+ I ADG + LLV EY P GSL +L DW + R+A +G
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSSCRLAHSVTRG 123
Query: 183 LEYLH------DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLA------KLGPVGDKTH 230
L YLH D P + +RDL N+L+ +SDFGL+ +L G++ +
Sbjct: 124 LAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDN 183
Query: 231 VSTRVMGTYGYCAPEYAMTGQLTLKS--------DVYSFGVVLLEII 269
+ +GT Y APE + G + L+ D+Y+ G++ EI
Sbjct: 184 AAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 119/284 (41%), Gaps = 37/284 (13%)
Query: 77 LGEGGFGRVYKGRLE-----STNQVVAIKQLDRNG-LQGNREFLVEVLMLSLLHHPNLVN 130
LG+G FG VY+G VA+K ++ + L+ EFL E ++ ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKR------LDWTTRMRIAAGAAKGLE 184
L+G + G L+V E M G L+ +L L P+ + +++AA A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
YL+ K ++RDL N ++ + K+ DFG+ + D + + + AP
Sbjct: 144 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMA 304
E G T SD++SFGVVL EI + + G N Q+
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSN---------------EQVL 241
Query: 305 DPTLQGQY---PVRGLYQALAVAAMCVQEQPNMRPLIADVVTAL 345
+ G Y P + + MC Q P MRP ++V L
Sbjct: 242 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 96/209 (45%), Gaps = 14/209 (6%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQ---VVAIKQLDRNGL---QGNREFLVEVLMLSL 122
K+ R LG+G FG V +G ++ + VA+K L + L + +F+ EV +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 123 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKG 182
L H NL+ L G ++ V E PLGSL D L + T R A A+G
Sbjct: 78 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEG 133
Query: 183 LEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT-YGY 241
+ YL K I+RDL N+LL K+ DFGL + P D +V + +
Sbjct: 134 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 190
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
CAPE T + SD + FGV L E+ T
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG+G FG+VYK + + T+ + A K +D + +++VE+ +L+ HPN+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ E+ G+++ + +L ++ L + + L YLHD +I+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDNK---IIH 158
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR---VMGTYGYCAPEYAMTGQ-- 251
RDLK NIL KL+DFG++ T R +GT + APE M
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVS-----AKNTRTIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 252 ---LTLKSDVYSFGVVLLEI 268
K+DV+S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 15/197 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V G+ V AIK + + G EF+ E ++ L H LV L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDV-AIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ EYM G L ++L ++ + R + + + +EYL K ++
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLH 128
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT---YGYCAPEYAMTGQLT 253
RDL N L+ + K+SDFGL++ V D + S+R G+ + PE M + +
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSR--GSKFPVRWSPPEVLMYSKFS 184
Query: 254 LKSDVYSFGVVLLEIIT 270
KSD+++FGV++ EI +
Sbjct: 185 SKSDIWAFGVLMWEIYS 201
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 96/209 (45%), Gaps = 14/209 (6%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQ---VVAIKQLDRNGL---QGNREFLVEVLMLSL 122
K+ R LG+G FG V +G ++ + VA+K L + L + +F+ EV +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 123 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKG 182
L H NL+ L G ++ V E PLGSL D L + T R A A+G
Sbjct: 68 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEG 123
Query: 183 LEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT-YGY 241
+ YL K I+RDL N+LL K+ DFGL + P D +V + +
Sbjct: 124 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
CAPE T + SD + FGV L E+ T
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 16/202 (7%)
Query: 75 CLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQG--NREFLVEVLMLSLLHHPNLVNLI 132
C+LG+G FG V K + T Q A+K +++ + L EV +L L HPN++ L
Sbjct: 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
D +V E G L D + +KR RI G+ Y+H K N
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEI----IKRKRFSEHDAARIIKQVFSGITYMH-KHN- 141
Query: 193 PVIYRDLKCSNILLGEGYHP---KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMT 249
+++RDLK NILL K+ DFGL+ T + R+ GT Y APE +
Sbjct: 142 -IVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQNTKMKDRI-GTAYYIAPE-VLR 196
Query: 250 GQLTLKSDVYSFGVVLLEIITG 271
G K DV+S GV+L +++G
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 96/209 (45%), Gaps = 14/209 (6%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQ---VVAIKQLDRNGL---QGNREFLVEVLMLSL 122
K+ R LG+G FG V +G ++ + VA+K L + L + +F+ EV +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 123 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKG 182
L H NL+ L G ++ V E PLGSL D L + T R A A+G
Sbjct: 68 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEG 123
Query: 183 LEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT-YGY 241
+ YL K I+RDL N+LL K+ DFGL + P D +V + +
Sbjct: 124 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
CAPE T + SD + FGV L E+ T
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 16/202 (7%)
Query: 75 CLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQG--NREFLVEVLMLSLLHHPNLVNLI 132
C+LG+G FG V K + T Q A+K +++ + L EV +L L HPN++ L
Sbjct: 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
D +V E G L D + +KR RI G+ Y+H K N
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEI----IKRKRFSEHDAARIIKQVFSGITYMH-KHN- 141
Query: 193 PVIYRDLKCSNILLGEGYHP---KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMT 249
+++RDLK NILL K+ DFGL+ T + R+ GT Y APE +
Sbjct: 142 -IVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQNTKMKDRI-GTAYYIAPE-VLR 196
Query: 250 GQLTLKSDVYSFGVVLLEIITG 271
G K DV+S GV+L +++G
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 96/209 (45%), Gaps = 14/209 (6%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQ---VVAIKQLDRNGL---QGNREFLVEVLMLSL 122
K+ R LG+G FG V +G ++ + VA+K L + L + +F+ EV +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 123 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKG 182
L H NL+ L G ++ V E PLGSL D L + T R A A+G
Sbjct: 72 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEG 127
Query: 183 LEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT-YGY 241
+ YL K I+RDL N+LL K+ DFGL + P D +V + +
Sbjct: 128 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
CAPE T + SD + FGV L E+ T
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 20/218 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + ++A+K QL++ G++ + E+ + S L HPN++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRHPNILRM 79
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
Y D + L+ E+ P G L L R D A L Y H++
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQ----KHGRFDEQRSATFMEELADALHYCHERK- 134
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVM-GTYGYCAPEYAMTG 250
VI+RD+K N+L+G K++DFG + P + R M GT Y PE
Sbjct: 135 --VIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGK 187
Query: 251 QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVA 288
K D++ GV+ E + G D+ H +
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 115/238 (48%), Gaps = 22/238 (9%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSLLHHP 126
+F +LG+G FG+V + T ++ AIK L ++ + + + +VE +L+LL P
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 127 NLVNLIGYCADGDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
+ + C RL V EY+ G L H+ + + + AA + GL +
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQV----GKFKEPQAVFYAAEISIGLFF 135
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR-VMGTYGYCAP 244
LH + +IYRDLK N++L H K++DFG+ K + V+TR GT Y AP
Sbjct: 136 LHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMM---DGVTTREFCGTPDYIAP 189
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNT------RAAGEHNLVAWARPLFKD 296
E D +++GV+L E++ G+ D ++ EHN V++ + L K+
Sbjct: 190 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHN-VSYPKSLSKE 246
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 20/218 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + ++A+K QL++ G++ + E+ + S L HPN++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRHPNILRM 80
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
Y D + L+ E+ P G L L R D A L Y H++
Sbjct: 81 YNYFHDRKRIYLMLEFAPRGELYKELQ----KHGRFDEQRSATFMEELADALHYCHERK- 135
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVM-GTYGYCAPEYAMTG 250
VI+RD+K N+L+G K++DFG + P + R M GT Y PE
Sbjct: 136 --VIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGK 188
Query: 251 QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVA 288
K D++ GV+ E + G D+ H +
Sbjct: 189 THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 226
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 20/218 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVEVLMLSLLHHPNLVNL 131
LG+G FG VY R + ++A+K QL++ G++ + E+ + S L HPN++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRHPNILRM 79
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
Y D + L+ E+ P G L L R D A L Y H++
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQ----KHGRFDEQRSATFMEELADALHYCHERK- 134
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVM-GTYGYCAPEYAMTG 250
VI+RD+K N+L+G K++DFG + P + R M GT Y PE
Sbjct: 135 --VIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGK 187
Query: 251 QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVA 288
K D++ GV+ E + G D+ H +
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 15/207 (7%)
Query: 76 LLGEGGFGRVYKGRL---ESTNQVVAIK--QLDRNGLQGNREFLVEVLMLSLLHHPNLVN 130
+LGEG FG V +G L + T+ VA+K +LD + + EFL E + HPN++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 131 LIGYCADGDQR-----LLVYEYMPLGSLEDHL--HDLPPDKKRLDWTTRMRIAAGAAKGL 183
L+G C + + +++ +M G L +L L K + T ++ A G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 184 EYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCA 243
EYL +N ++RDL N +L + ++DFGL+K GD + A
Sbjct: 161 EYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 244 PEYAMTGQLTLKSDVYSFGVVLLEIIT 270
E T KSDV++FGV + EI T
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG+G FG+VYK + + T+ + A K +D + +++VE+ +L+ HPN+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ E+ G+++ + +L ++ L + + L YLHD +I+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDNK---IIH 158
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR---VMGTYGYCAPEYAMTGQ-- 251
RDLK NIL KL+DFG++ T R +GT + APE M
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVS-----AKNTRXIQRRDXFIGTPYWMAPEVVMCETSK 213
Query: 252 ---LTLKSDVYSFGVVLLEI 268
K+DV+S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG+G FG+VYK + + T+ + A K +D + +++VE+ +L+ HPN+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+ ++ E+ G+++ + +L ++ L + + L YLHD +I+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDNK---IIH 158
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR---VMGTYGYCAPEYAMTGQ-- 251
RDLK NIL KL+DFG++ T R +GT + APE M
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVS-----AKNTRXIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 252 ---LTLKSDVYSFGVVLLEI 268
K+DV+S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 77 LGEGGFGRVYKGRLEST-----NQVVAIKQLDRNGLQGNR-EFLVEVLMLSLLHHPNLVN 130
LG+G FG VY+G + VAIK ++ R EFL E ++ + ++V
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDL-----------PPDKKRLDWTTRMRIAAGA 179
L+G + G L++ E M G L+ +L L PP ++ +++A
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM-----IQMAGEI 137
Query: 180 AKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY 239
A G+ YL+ AN ++RDL N ++ E + K+ DFG+ + D + +
Sbjct: 138 ADGMAYLN--AN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 194
Query: 240 GYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ +PE G T SDV+SFGVVL EI T
Sbjct: 195 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 77 LGEGGFGRVYKGRLEST-----NQVVAIKQLDRNGLQGNR-EFLVEVLMLSLLHHPNLVN 130
LG+G FG VY+G + VAIK ++ R EFL E ++ + ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRL------DWTTRMRIAAGAAKGLE 184
L+G + G L++ E M G L+ +L L P+ + + +++A A G+
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
YL+ AN ++RDL N + E + K+ DFG+ + D + + + +P
Sbjct: 140 YLN--AN-KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIIT 270
E G T SDV+SFGVVL EI T
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV---EVLMLSLLHHPNLVNLIG 133
LGEG FG+V T Q VA+K + R L+ + + E+ L LL HP+++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
++V EY G L D++ +KKR+ R +EY H
Sbjct: 77 VITTPTDIVMVIEYAG-GELFDYI----VEKKRMTEDEGRRFFQQIICAIEYCHRHK--- 128
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+++RDLK N+LL + + K++DFGL+ + G+ S G+ Y APE + G+L
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VINGKLY 184
Query: 254 L--KSDVYSFGVVLLEIITGRKAIDN 277
+ DV+S G+VL ++ GR D+
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFDD 210
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 95/206 (46%), Gaps = 14/206 (6%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSLLHHPNLVNLI 132
LLG+G FG+V R ++T + A+K L + + E + E +L HP L L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRI-AAGAAKGLEYLHDKAN 191
D+ V EY G L HL ++R+ R R A LEYLH +
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEYLHSR-- 124
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
V+YRD+K N++L + H K++DFGL K G + D + T GT Y APE
Sbjct: 125 -DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKT-FCGTPEYLAPEVLEDND 181
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDN 277
D + GVV+ E++ GR N
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 77 LGEGGFGRVYKGRLEST-----NQVVAIKQLDRNGLQGNR-EFLVEVLMLSLLHHPNLVN 130
LG+G FG VY+G + VAIK ++ R EFL E ++ + ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDL-----------PPDKKRLDWTTRMRIAAGA 179
L+G + G L++ E M G L+ +L L PP ++ +++A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM-----IQMAGEI 147
Query: 180 AKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY 239
A G+ YL+ AN ++RDL N ++ E + K+ DFG+ + D + +
Sbjct: 148 ADGMAYLN--AN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 204
Query: 240 GYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ +PE G T SDV+SFGVVL EI T
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 120/289 (41%), Gaps = 47/289 (16%)
Query: 77 LGEGGFGRVYKGRLE-----STNQVVAIKQLDRNG-LQGNREFLVEVLMLSLLHHPNLVN 130
LG+G FG VY+G VA+K ++ + L+ EFL E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKR------LDWTTRMRIAAGAAKGLE 184
L+G + G L+V E M G L+ +L L P+ + +++AA A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG---- 240
YL+ K ++RDL N ++ + K+ DFG+ + D + G G
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR-----DIYETAYYRKGGKGLLPV 196
Query: 241 -YCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRK 299
+ APE G T SD++SFGVVL EI + + G N
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSN-------------- 238
Query: 300 FSQMADPTLQGQY---PVRGLYQALAVAAMCVQEQPNMRPLIADVVTAL 345
Q+ + G Y P + + MC Q P MRP ++V L
Sbjct: 239 -EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSLLHHPNLVNLI 132
LLG+G FG+V R ++T + A+K L + + E + E +L HP L L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRI-AAGAAKGLEYLHDKAN 191
D+ V EY G L HL ++R+ R R A LEYLH +
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEYLHSR-- 124
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
V+YRD+K N++L + H K++DFGL K G + D + T GT Y APE
Sbjct: 125 -DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKT-FCGTPEYLAPEVLEDND 181
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
D + GVV+ E++ GR
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGR 202
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQ---VVAIKQLDRNGL---QGNREFLVEVLMLSL 122
K+ R LG+G FG V +G ++ + VA+K L + L + +F+ EV +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 123 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKG 182
L H NL+ L G ++ V E PLGSL D L + T R A A+G
Sbjct: 78 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEG 133
Query: 183 LEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT-YGY 241
+ YL K I+RDL N+LL K+ DFGL + P D V + +
Sbjct: 134 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 190
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
CAPE T + SD + FGV L E+ T
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 9/194 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V G+ V AIK + + G EF+ E ++ L H LV L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDV-AIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ EYM G L ++L ++ + R + + + +EYL K ++
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLH 143
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+ + K+SDFGL++ + D+ S + PE M + + KS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 257 DVYSFGVVLLEIIT 270
D+++FGV++ EI +
Sbjct: 203 DIWAFGVLMWEIYS 216
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 10/195 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+GEG G V + T + VA+K++D Q EV+++ HH N+V++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
GD+ +V E++ G+L D + R++ + + L YLH++ VI+
Sbjct: 113 VGDELWVVMEFLEGGALTDIV-----THTRMNEEQIATVCLSVLRALSYLHNQG---VIH 164
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RD+K +ILL KLSDFG V + ++GT + APE +
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFC--AQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 257 DVYSFGVVLLEIITG 271
D++S G++++E+I G
Sbjct: 223 DIWSLGIMVIEMIDG 237
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQ---VVAIKQLDRNGL---QGNREFLVEVLMLSL 122
K+ R LG+G FG V +G ++ + VA+K L + L + +F+ EV +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 123 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKG 182
L H NL+ L G ++ V E PLGSL D L + T R A A+G
Sbjct: 68 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEG 123
Query: 183 LEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT-YGY 241
+ YL K I+RDL N+LL K+ DFGL + P D V + +
Sbjct: 124 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 180
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
CAPE T + SD + FGV L E+ T
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR-----NGLQGNREFLVEVLMLSLLH 124
N++ LGEG FG+V +T Q VA+K +++ + +QG E E+ L LL
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 62
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLE 184
HP+++ L D+ ++V EY + L D + ++ R +E
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRFFQQIISAVE 117
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
Y H +++RDLK N+LL E + K++DFGL+ + G+ S G+ Y AP
Sbjct: 118 YCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAP 171
Query: 245 EYAMTGQLTL--KSDVYSFGVVLLEIITGRKAIDN 277
E ++G+L + DV+S GV+L ++ R D+
Sbjct: 172 E-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 205
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 67 VTKN-FRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSL 122
VT N F LLG+G FG+V + ++T + A+K L + + E L E +L
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 123 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRI-AAGAAK 181
HP L L D+ V EY G L HL ++R+ R R A
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVS 121
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
L+YLH + N V+YRDLK N++L + H K++DFGL K G T GT Y
Sbjct: 122 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEY 177
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIITGR 272
APE D + GVV+ E++ GR
Sbjct: 178 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 128/290 (44%), Gaps = 40/290 (13%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + +T + VA+K L L+ L ++ + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 130 NLIGYCAD-GDQRLLVYEYMPLGSLEDHL---------HDLPPDKKRLDWTTRMRI---A 176
NL+G C G +++ E+ G+L +L + + P+ D+ T + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 177 AGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVST-RV 235
AKG+E+L A+ I+RDL NILL E K+ DFGLA+ D +V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 201
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFK 295
+ APE T++SDV+SFGV+L EI + A + V +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF--------SLGASPYPGVKIDEEFCR 253
Query: 296 DRRKFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTAL 345
++ ++M P Y +YQ + C +P+ RP +++V L
Sbjct: 254 RLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 296
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR-----NGLQGNREFLVEVLMLSLLH 124
N++ LGEG FG+V +T Q VA+K +++ + +QG E E+ L LL
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 72
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLE 184
HP+++ L D+ ++V EY + L D + ++ R +E
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRFFQQIISAVE 127
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
Y H +++RDLK N+LL E + K++DFGL+ + G+ S G+ Y AP
Sbjct: 128 YCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAP 181
Query: 245 EYAMTGQLTL--KSDVYSFGVVLLEIITGRKAIDN 277
E ++G+L + DV+S GV+L ++ R D+
Sbjct: 182 E-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 215
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 126/292 (43%), Gaps = 38/292 (13%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + +T + VA+K L L+ L ++ + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 130 NLIGYCAD-GDQRLLVYEYMPLGSLEDHL---------HDLPPDKKRLDWTTRMRI---A 176
NL+G C G +++ E+ G+L +L + + P+ D+ T + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 177 AGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVM 236
AKG+E+L A+ I+RDL NILL E K+ DFGLA+
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 237 GTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKD 296
+ APE T++SDV+SFGV+L EI + A + V +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF--------SLGASPYPGVKIDEEFCRR 254
Query: 297 RRKFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYL 348
++ ++M P Y +YQ + C +P+ RP +++V L L
Sbjct: 255 LKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHLGNL 299
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 129/293 (44%), Gaps = 40/293 (13%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + +T + VA+K L L+ L ++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 130 NLIGYCAD-GDQRLLVYEYMPLGSLEDHL---------HDLPPDKKRLDWTTRMRI---A 176
NL+G C G +++ E+ G+L +L + + P+ D+ T + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 177 AGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVST-RV 235
AKG+E+L A+ I+RDL NILL E K+ DFGLA+ D +V
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 210
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFK 295
+ APE T++SDV+SFGV+L EI + A + V +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF--------SLGASPYPGVKIDEEFCR 262
Query: 296 DRRKFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYL 348
++ ++M P Y +YQ + C +P+ RP +++V L L
Sbjct: 263 RLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHLGNL 308
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 128/290 (44%), Gaps = 40/290 (13%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + +T + VA+K L L+ L ++ + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 130 NLIGYCAD-GDQRLLVYEYMPLGSLEDHL---------HDLPPDKKRLDWTTRMRI---A 176
NL+G C G +++ E+ G+L +L + + P+ D+ T + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 177 AGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVST-RV 235
AKG+E+L A+ I+RDL NILL E K+ DFGLA+ D +V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 201
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFK 295
+ APE T++SDV+SFGV+L EI + A + V +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF--------SLGASPYPGVKIDEEFCR 253
Query: 296 DRRKFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTAL 345
++ ++M P Y +YQ + C +P+ RP +++V L
Sbjct: 254 RLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 296
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR-----NGLQGNREFLVEVLMLSLLH 124
N++ LGEG FG+V +T Q VA+K +++ + +QG E E+ L LL
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 71
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLE 184
HP+++ L D+ ++V EY + L D + ++ R +E
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRFFQQIISAVE 126
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
Y H +++RDLK N+LL E + K++DFGL+ + G+ S G+ Y AP
Sbjct: 127 YCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAP 180
Query: 245 EYAMTGQLTL--KSDVYSFGVVLLEIITGRKAIDN 277
E ++G+L + DV+S GV+L ++ R D+
Sbjct: 181 E-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 126/292 (43%), Gaps = 38/292 (13%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + +T + VA+K L L+ L ++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 130 NLIGYCAD-GDQRLLVYEYMPLGSLEDHL---------HDLPPDKKRLDWTTRMRI---A 176
NL+G C G +++ E+ G+L +L + + P+ D+ T + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 177 AGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVM 236
AKG+E+L A+ I+RDL NILL E K+ DFGLA+
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 237 GTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKD 296
+ APE T++SDV+SFGV+L EI + A + V +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF--------SLGASPYPGVKIDEEFCRR 263
Query: 297 RRKFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYL 348
++ ++M P Y +YQ + C +P+ RP +++V L L
Sbjct: 264 LKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHLGNL 308
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 97/213 (45%), Gaps = 14/213 (6%)
Query: 65 AAVTKN-FRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLML 120
+ VT N F LLG+G FG+V + ++T + A+K L + + E L E +L
Sbjct: 3 SRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 62
Query: 121 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRI-AAGA 179
HP L L D+ V EY G L HL ++R+ R R A
Sbjct: 63 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEI 117
Query: 180 AKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY 239
L+YLH + N V+YRDLK N++L + H K++DFGL K G T GT
Sbjct: 118 VSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTP 173
Query: 240 GYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGR 272
Y APE D + GVV+ E++ GR
Sbjct: 174 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 126/292 (43%), Gaps = 38/292 (13%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + +T + VA+K L L+ L ++ + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 130 NLIGYCAD-GDQRLLVYEYMPLGSLEDHL---------HDLPPDKKRLDWTTRMRI---A 176
NL+G C G +++ E+ G+L +L + + P+ D+ T + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 177 AGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVM 236
AKG+E+L A+ I+RDL NILL E K+ DFGLA+
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 237 GTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKD 296
+ APE T++SDV+SFGV+L EI + A + V +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF--------SLGASPYPGVKIDEEFCRR 254
Query: 297 RRKFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYL 348
++ ++M P Y +YQ + C +P+ RP +++V L L
Sbjct: 255 LKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHLGNL 299
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 9/194 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V G+ V AIK + + G EF+ E ++ L H LV L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDV-AIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ EYM G L ++L ++ + R + + + +EYL K ++
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLH 123
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+ + K+SDFGL++ + D+ S + PE M + + KS
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 257 DVYSFGVVLLEIIT 270
D+++FGV++ EI +
Sbjct: 183 DIWAFGVLMWEIYS 196
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 17/201 (8%)
Query: 76 LLGE-GGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGY 134
++GE G FG+VYK + + T+ + A K +D + +++VE+ +L+ HPN+V L+
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+ ++ E+ G+++ + +L ++ L + + L YLHD +
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDNK---I 129
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR--VMGTYGYCAPEYAMTGQ- 251
I+RDLK NIL KL+DFG++ +T + R +GT + APE M
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVSAKNT---RTXIQRRDSFIGTPYWMAPEVVMCETS 186
Query: 252 ----LTLKSDVYSFGVVLLEI 268
K+DV+S G+ L+E+
Sbjct: 187 KDRPYDYKADVWSLGITLIEM 207
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 9/194 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V G+ V AIK + + G EF+ E ++ L H LV L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDV-AIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ EYM G L ++L ++ + R + + + +EYL K ++
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLH 127
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+ + K+SDFGL++ + D+ S + PE M + + KS
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 257 DVYSFGVVLLEIIT 270
D+++FGV++ EI +
Sbjct: 187 DIWAFGVLMWEIYS 200
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G V T + VA+K +D + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 124
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR-----NGLQGNREFLVEVLMLSLLH 124
N++ LGEG FG+V +T Q VA+K +++ + +QG E E+ L LL
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 66
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLE 184
HP+++ L D+ ++V EY + L D + ++ R +E
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRFFQQIISAVE 121
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
Y H +++RDLK N+LL E + K++DFGL+ + G+ S G+ Y AP
Sbjct: 122 YCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAP 175
Query: 245 EYAMTGQLTL--KSDVYSFGVVLLEIITGRKAIDN 277
E ++G+L + DV+S GV+L ++ R D+
Sbjct: 176 E-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 209
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 129/293 (44%), Gaps = 40/293 (13%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + +T + VA+K L L+ L ++ + HH N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 130 NLIGYCAD-GDQRLLVYEYMPLGSLEDHL---------HDLPPDKKRLDWTTRMRI---A 176
NL+G C G +++ E+ G+L +L + + P+ D+ T + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 177 AGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVST-RV 235
AKG+E+L A+ I+RDL NILL E K+ DFGLA+ D +V
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 247
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFK 295
+ APE T++SDV+SFGV+L EI + A + V +
Sbjct: 248 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF--------SLGASPYPGVKIDEEFCR 299
Query: 296 DRRKFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYL 348
++ ++M P Y +YQ + C +P+ RP +++V L L
Sbjct: 300 RLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHLGNL 345
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G V T + VA+K +D + + E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 125
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 77 LGEGGFGRVYKGRLESTNQ-------VVAIKQLDRNGLQGNREFLV-EVLMLSLL-HHPN 127
LGEG FG+V ++ VA+K L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPP------------DKKRLDWTTRMRI 175
++NL+G C ++ EY G+L ++L P ++++ + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A+G+EYL A+ I+RDL N+L+ E K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ APE T +SDV+SFGV++ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 77 LGEGGFGRVYKGRLESTNQ-------VVAIKQLDRNGLQGNREFLV-EVLMLSLL-HHPN 127
LGEG FG+V ++ VA+K L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPP------------DKKRLDWTTRMRI 175
++NL+G C ++ EY G+L ++L P ++++ + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A+G+EYL A+ I+RDL N+L+ E K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ APE T +SDV+SFGV++ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 9/194 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V G+ V AIK + + G EF+ E ++ L H LV L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDV-AIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ EYM G L ++L ++ + R + + + +EYL K ++
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLH 143
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+ + K+SDFGL++ + D+ S + PE M + + KS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 257 DVYSFGVVLLEIIT 270
D+++FGV++ EI +
Sbjct: 203 DIWAFGVLMWEIYS 216
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G V T + VA+K +D + + E+ + +L+H N+V G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 123
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 124 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 72 RADCLLGEGGFGRVYKGRLESTNQ---VVAIKQLDRNGLQGNR-EFLVEVLMLSLLHHPN 127
+ + ++G G FG V G L+ + VAIK L + R +FL E ++ HPN
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
+++L G +++ E+M GSL+ L + +R G A G++YL
Sbjct: 70 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYLA 126
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG-----YC 242
D ++R L NIL+ K+SDFGL++ + D T T G +
Sbjct: 127 DMN---YVHRALAARNILVNSNLVCKVSDFGLSRF--LEDDTSDPTYTSALGGKIPIRWT 181
Query: 243 APEYAMTGQLTLKSDVYSFGVVLLEIIT 270
APE + T SDV+S+G+V+ E+++
Sbjct: 182 APEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G V T + VA+K +D + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 124
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 77 LGEGGFGRVYKGRLESTNQ-------VVAIKQLDRNGLQGNREFLV-EVLMLSLL-HHPN 127
LGEG FG+V ++ VA+K L + + + LV E+ M+ ++ H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPP------------DKKRLDWTTRMRI 175
++NL+G C ++ EY G+L ++L P ++++ + +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A+G+EYL A+ I+RDL N+L+ E K++DFGLA+ D +T
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ APE T +SDV+SFGV++ EI T
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G V T + VA+K +D + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 124
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G V T + VA+K +D + + E+ + ++L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 125
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G V T + VA+K +D + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 124
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G V T + VA+K +D + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 124
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + E VA+K L +E L+ L M L H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHL-HDLPPD-----------KKRLDWTTRMRIAA 177
NL+G C G L++ EY G L + L PP +++L + ++
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 178 GAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMG 237
A+G+ +L A+ I+RD+ N+LL G+ K+ DFGLA+ V
Sbjct: 174 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 238 TYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ APE T++SDV+S+G++L EI +
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 9/194 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V G+ V AIK + + G EF+ E ++ L H LV L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDV-AIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ EYM G L ++L ++ + R + + + +EYL K ++
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLH 128
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+ + K+SDFGL++ + D+ S + PE M + + KS
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 257 DVYSFGVVLLEIIT 270
D+++FGV++ EI +
Sbjct: 188 DIWAFGVLMWEIYS 201
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G V T + VA+K +D + + E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 125
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G V T + VA+K +D + + E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 125
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G V T + VA+K +D + + E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 125
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 9/194 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V G+ V AIK + + G EF+ E ++ L H LV L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDV-AIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
++ EYM G L ++L ++ + R + + + +EYL K ++
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLH 134
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RDL N L+ + K+SDFGL++ + D+ S + PE M + + KS
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 257 DVYSFGVVLLEIIT 270
D+++FGV++ EI +
Sbjct: 194 DIWAFGVLMWEIYS 207
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 126/292 (43%), Gaps = 38/292 (13%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + +T + VA+K L L+ L ++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 130 NLIGYCAD-GDQRLLVYEYMPLGSLEDHL---------HDLPPDKKRLDWTTRMRI---A 176
NL+G C G +++ E+ G+L +L + + P+ D+ T + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 177 AGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVM 236
AKG+E+L A+ I+RDL NILL E K+ DFGLA+
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 237 GTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKD 296
+ APE T++SDV+SFGV+L EI + A + V +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF--------SLGASPYPGVKIDEEFCRR 263
Query: 297 RRKFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYL 348
++ ++M P Y +YQ + C +P+ RP +++V L L
Sbjct: 264 LKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHLGNL 308
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G V T + VA+K +D + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 124
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G V T + VA+K +D + + E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 125
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRN------GLQGNREFLVEVLMLSLLHHPNLV 129
+LG GGFG V+ ++++T ++ A K+L++ G QG +VE +L+ +H +V
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIV 248
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
+L LV M G + H++++ D + A GLE+LH +
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLA---KLGPVGDKTHVSTRVMGTYGYCAPEY 246
+IYRDLK N+LL + + ++SD GLA K G K + GT G+ APE
Sbjct: 309 N---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPEL 360
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGE 283
+ + D ++ GV L E+I R RA GE
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPF---RARGE 394
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRN------GLQGNREFLVEVLMLSLLHHPNLV 129
+LG GGFG V+ ++++T ++ A K+L++ G QG +VE +L+ +H +V
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIV 248
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
+L LV M G + H++++ D + A GLE+LH +
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLA---KLGPVGDKTHVSTRVMGTYGYCAPEY 246
+IYRDLK N+LL + + ++SD GLA K G K + GT G+ APE
Sbjct: 309 N---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPEL 360
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGE 283
+ + D ++ GV L E+I R RA GE
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPF---RARGE 394
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G V T + VA+K +D + + E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 125
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 124/290 (42%), Gaps = 36/290 (12%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + +T + VA+K L L+ L ++ + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 130 NLIGYCAD-GDQRLLVYEYMPLGSLEDHLHD-------LPPDKKRLDWTTRMRI---AAG 178
NL+G C G +++ E+ G+L +L P+ D+ T + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 179 AAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
AKG+E+L A+ I+RDL NILL E K+ DFGLA+
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 239 YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRR 298
+ APE T++SDV+SFGV+L EI + A + V + +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIF--------SLGASPYPGVKIDEEFCRRLK 265
Query: 299 KFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYL 348
+ ++M P Y +YQ + C +P+ RP +++V L L
Sbjct: 266 EGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHLGNL 308
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G V T + VA+K +D + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 124
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G V T + VA+K +D + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 124
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G V T + VA+K +D + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 124
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRN------GLQGNREFLVEVLMLSLLHHPNLV 129
+LG GGFG V+ ++++T ++ A K+L++ G QG +VE +L+ +H +V
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIV 248
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
+L LV M G + H++++ D + A GLE+LH +
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLA---KLGPVGDKTHVSTRVMGTYGYCAPEY 246
+IYRDLK N+LL + + ++SD GLA K G K + GT G+ APE
Sbjct: 309 N---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPEL 360
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGE 283
+ + D ++ GV L E+I R RA GE
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPF---RARGE 394
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 126/286 (44%), Gaps = 36/286 (12%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + +T + VA+K L L+ L ++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 130 NLIGYCAD-GDQRLLVYEYMPLGSLEDHLHD-----LPPDKKRLDWTTRMRI---AAGAA 180
NL+G C G +++ E+ G+L +L +P D+ T + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVST-RVMGTY 239
KG+E+L A+ I+RDL NILL E K+ DFGLA+ D +V
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPL 210
Query: 240 GYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRK 299
+ APE T++SDV+SFGV+L EI + A + V + ++
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIF--------SLGASPYPGVKIDEEFCRRLKE 262
Query: 300 FSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTAL 345
++M P Y +YQ + C +P+ RP +++V L
Sbjct: 263 GTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 301
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRN------GLQGNREFLVEVLMLSLLHHPNLV 129
+LG GGFG V+ ++++T ++ A K+L++ G QG +VE +L+ +H +V
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIV 248
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
+L LV M G + H++++ D + A GLE+LH +
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLA---KLGPVGDKTHVSTRVMGTYGYCAPEY 246
+IYRDLK N+LL + + ++SD GLA K G K + GT G+ APE
Sbjct: 309 N---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPEL 360
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGE 283
+ + D ++ GV L E+I R RA GE
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPF---RARGE 394
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 124/291 (42%), Gaps = 37/291 (12%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + +T + VA+K L L+ L ++ + HH N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 130 NLIGYCAD-GDQRLLVYEYMPLGSLEDHL---------HDLPPD--KKRLDWTTRMRIAA 177
NL+G C G +++ E+ G+L +L + P D K L + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 178 GAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMG 237
AKG+E+L A+ I+RDL NILL E K+ DFGLA+
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 238 TYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDR 297
+ APE T++SDV+SFGV+L EI + A + V +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF--------SLGASPYPGVKIDEEFCRRL 264
Query: 298 RKFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYL 348
++ ++M P Y +YQ + C +P+ RP +++V L L
Sbjct: 265 KEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHLGNL 308
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G V T + VA+K +D + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 124
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G V T + VA+K +D + + E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 125
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 126/286 (44%), Gaps = 36/286 (12%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + +T + VA+K L L+ L ++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 130 NLIGYCAD-GDQRLLVYEYMPLGSLEDHLHD-----LPPDKKRLDWTTRMRI---AAGAA 180
NL+G C G +++ E+ G+L +L +P D+ T + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVST-RVMGTY 239
KG+E+L A+ I+RDL NILL E K+ DFGLA+ D +V
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR-DIYKDPDYVRKGDARLPL 210
Query: 240 GYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRK 299
+ APE T++SDV+SFGV+L EI + A + V + ++
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIF--------SLGASPYPGVKIDEEFXRRLKE 262
Query: 300 FSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTAL 345
++M P Y +YQ + C +P+ RP +++V L
Sbjct: 263 GTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 301
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 77 LGEGGFGRVYKGRLESTNQ-------VVAIKQLDRNGLQGNREFLV-EVLMLSLL-HHPN 127
LGEG FG+V ++ VA+K L + + + LV E+ M+ ++ H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPP------------DKKRLDWTTRMRI 175
++NL+G C ++ EY G+L ++L P ++++ + +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A+G+EYL A+ I+RDL N+L+ E K++DFGLA+ D +T
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ APE T +SDV+SFGV++ EI T
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG +G V T + VA+K +D + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 124
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 77 LGEGGFGRVYKGRLESTNQ-------VVAIKQLDRNGLQGNREFLV-EVLMLSLL-HHPN 127
LGEG FG+V ++ VA+K L + + + LV E+ M+ ++ H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPP------------DKKRLDWTTRMRI 175
++NL+G C ++ EY G+L ++L P ++++ + +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A+G+EYL A+ I+RDL N+L+ E K++DFGLA+ D +T
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ APE T +SDV+SFGV++ EI T
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 77 LGEGGFGRVYKGRLESTNQ-------VVAIKQLDRNGLQGNREFLV-EVLMLSLL-HHPN 127
LGEG FG+V ++ VA+K L + + + LV E+ M+ ++ H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPP------------DKKRLDWTTRMRI 175
++NL+G C ++ EY G+L ++L P ++++ + +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A+G+EYL A+ I+RDL N+L+ E K++DFGLA+ D +T
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ APE T +SDV+SFGV++ EI T
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 71 FRADCLLGEGGFGRVYKG-RLESTNQVVAIKQLDRNGLQGNRE-FLVEVLMLSLLHHPNL 128
+ D +G G F VYKG E+T +V + DR + R+ F E L L HPN+
Sbjct: 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNI 87
Query: 129 VNLIGY---CADGDQRL-LVYEYMPLGSLEDHLHDLPPDKKRL--DWTTRMRIAAGAAKG 182
V G + + LV E G+L+ +L K ++ W ++ KG
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKG 141
Query: 183 LEYLHDKANPPVIYRDLKCSNILL-GEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
L++LH + PP+I+RDLKC NI + G K+ D GLA L + + V+GT +
Sbjct: 142 LQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEF 196
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
APE + DVY+FG LE T
Sbjct: 197 XAPE-XYEEKYDESVDVYAFGXCXLEXATS 225
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 77 LGEGGFGRVYKGRLESTNQ-------VVAIKQLDRNGLQGNREFLV-EVLMLSLL-HHPN 127
LGEG FG+V ++ VA+K L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPP------------DKKRLDWTTRMRI 175
++NL+G C ++ EY G+L ++L P ++++ + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A+G+EYL A+ I+RDL N+L+ E +++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ APE T +SDV+SFGV++ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF-LVEV---LMLSLLHHPNLVNL 131
++G G + +V RL+ T+++ A+K + + + + + V+ + +HP LV L
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 132 IGYCADGDQRLL-VYEYMPLGSLEDHLH---DLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
C + RL V EY+ G L H+ LP + R +A + L YLH
Sbjct: 87 HS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-------YSAEISLALNYLH 138
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTYGYCAPEY 246
++ +IYRDLK N+LL H KL+D+G+ K G GD T + GT Y APE
Sbjct: 139 ERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEI 192
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITGRKAID 276
D ++ GV++ E++ GR D
Sbjct: 193 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 22/226 (9%)
Query: 49 GGSDHIAAHTFTFRELAAVT-KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGL 107
GGS +AA +R A+ K + +G+G FG V G VA+K + +
Sbjct: 2 GGS--VAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKNDAT 57
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRL-LVYEYMPLGSLEDHLHDLPPDKKR 166
+ FL E +++ L H NLV L+G + L +V EYM GSL D+L +
Sbjct: 58 A--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS--RGRSV 113
Query: 167 LDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVG 226
L ++ + + +EYL ++RDL N+L+ E K+SDFGL K
Sbjct: 114 LGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-- 168
Query: 227 DKTHVSTRVMGTY--GYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
ST+ G + APE + + KSDV+SFG++L EI +
Sbjct: 169 -----STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGL-QGNREFLV-EVLMLSLLHHPNLVNLIGY 134
+G G +GR K R +S +++ K+LD + + ++ LV EV +L L HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 135 CADGDQRLL--VYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN- 191
D L V EY G L + +++ LD +R+ L+ H +++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 192 -PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTG 250
V++RDLK +N+ L + KL DFGLA++ + T + +GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKTFVGTPYYMSPEQMNRM 191
Query: 251 QLTLKSDVYSFGVVLLEI 268
KSD++S G +L E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGN--REFLVEVLMLSLLHHPN 127
N+R +G+G F +V R T + VA+K +D+ L ++ EV ++ +L+HPN
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHL--HDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
+V L LV EY G + D+L H +K + + R A ++Y
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFRQIVSA---VQY 129
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
H K +++RDLK N+LL + K++DFG + VG+K G+ Y APE
Sbjct: 130 CHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAAPE 183
Query: 246 YAMTGQLT-LKSDVYSFGVVLLEIITGRKAID 276
+ + DV+S GV+L +++G D
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQL---DRNGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG GG VY N VAIK + R + + F EV S L H N+V++I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
+ D LV EY+ +L +++ P L T + G+++ HD
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHGP----LSVDTAINFTNQILDGIKHAHDMR--- 131
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+++RD+K NIL+ K+ DFG+AK T + V+GT Y +PE A
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQAKGEATD 190
Query: 254 LKSDVYSFGVVLLEIITGR 272
+D+YS G+VL E++ G
Sbjct: 191 ECTDIYSIGIVLYEMLVGE 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGL-QGNREFLV-EVLMLSLLHHPNLVNLIGY 134
+G G +GR K R +S +++ K+LD + + ++ LV EV +L L HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 135 CADGDQRLL--VYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN- 191
D L V EY G L + +++ LD +R+ L+ H +++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 192 -PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTG 250
V++RDLK +N+ L + KL DFGLA++ + T + +GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKAFVGTPYYMSPEQMNRM 191
Query: 251 QLTLKSDVYSFGVVLLEI 268
KSD++S G +L E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 127/293 (43%), Gaps = 40/293 (13%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + +T + VA+K L L+ L ++ + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 130 NLIGYCAD-GDQRLLVYEYMPLGSLEDHLH----------DLPPD--KKRLDWTTRMRIA 176
NL+G C G +++ E+ G+L +L + P D K L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 177 AGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVST-RV 235
AKG+E+L A+ I+RDL NILL E K+ DFGLA+ D +V
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 212
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFK 295
+ APE T++SDV+SFGV+L EI + A + V +
Sbjct: 213 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF--------SLGASPYPGVKIDEEFCR 264
Query: 296 DRRKFSQMADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYL 348
++ ++M P Y +YQ + C +P+ RP +++V L L
Sbjct: 265 RLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHLGNL 310
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + E VA+K L +E L+ L M L H N+V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLH---------DLPP----------DKKRLDWT 170
NL+G C G L++ EY G L + L L P D + L+
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 171 TRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH 230
+ ++ A+G+ +L A+ I+RD+ N+LL G+ K+ DFGLA+
Sbjct: 159 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 231 VSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
V + APE T++SDV+S+G++L EI +
Sbjct: 216 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSLLHHPNLVNLI 132
LLG+G FG+V R ++T + A+K L + + E + E +L HP L L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRI-AAGAAKGLEYLHDKAN 191
D+ V EY G L HL ++R+ R R A LEYLH +
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEYLHSR-- 124
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
V+YRD+K N++L + H K++DFGL K G + D + GT Y APE
Sbjct: 125 -DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKX-FCGTPEYLAPEVLEDND 181
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
D + GVV+ E++ GR
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSLLHHPNLVNLI 132
LLG+G FG+V R ++T + A+K L + + E + E +L HP L L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRI-AAGAAKGLEYLHDKAN 191
D+ V EY G L HL ++R+ R R A LEYLH +
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEYLHSR-- 124
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
V+YRD+K N++L + H K++DFGL K G + D + GT Y APE
Sbjct: 125 -DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKX-FCGTPEYLAPEVLEDND 181
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
D + GVV+ E++ GR
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGR 202
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 115/238 (48%), Gaps = 22/238 (9%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSLLHHP 126
+F +LG+G FG+V + T+++ A+K L ++ + + + +VE +L+L P
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 127 NLVNLIGYCADGDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
+ + C RL V EY+ G L H+ + R + AA A GL +
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFF 457
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVM-GTYGYCAP 244
L K +IYRDLK N++L H K++DFG+ K + D V+T+ GT Y AP
Sbjct: 458 LQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN-IWDG--VTTKXFCGTPDYIAP 511
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNT------RAAGEHNLVAWARPLFKD 296
E D ++FGV+L E++ G+ + ++ EHN VA+ + + K+
Sbjct: 512 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN-VAYPKSMSKE 568
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSLLHHPNLVNLI 132
LLG+G FG+V R ++T + A+K L + + E + E +L HP L L
Sbjct: 17 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 76
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRI-AAGAAKGLEYLHDKAN 191
D+ V EY G L HL ++R+ R R A LEYLH +
Sbjct: 77 YAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEYLHSR-- 129
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
V+YRD+K N++L + H K++DFGL K G + D + GT Y APE
Sbjct: 130 -DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKX-FCGTPEYLAPEVLEDND 186
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
D + GVV+ E++ GR
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGR 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSLLHHPNLVNLI 132
LLG+G FG+V R ++T + A+K L + + E + E +L HP L L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRI-AAGAAKGLEYLHDKAN 191
D+ V EY G L HL ++R+ R R A LEYLH +
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEYLHSR-- 124
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
V+YRD+K N++L + H K++DFGL K G + D + GT Y APE
Sbjct: 125 -DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKX-FCGTPEYLAPEVLEDND 181
Query: 252 LTLKSDVYSFGVVLLEIITGR 272
D + GVV+ E++ GR
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGR 202
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF-LVEV---LMLSLLHHPNLVNL 131
++G G + +V RL+ T+++ A+K + + + + + V+ + +HP LV L
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 132 IGYCADGDQRLL-VYEYMPLGSLEDHLH---DLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
C + RL V EY+ G L H+ LP + R +A + L YLH
Sbjct: 72 HS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-------YSAEISLALNYLH 123
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTYGYCAPEY 246
++ +IYRDLK N+LL H KL+D+G+ K G GD T + GT Y APE
Sbjct: 124 ERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEI 177
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITGRKAID 276
D ++ GV++ E++ GR D
Sbjct: 178 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 115/275 (41%), Gaps = 22/275 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQL---DRNGLQGNREFLVEVLMLSLLHHP 126
NFR + +G G F VY+ VA+K++ D + + + E+ +L L+HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYL 186
N++ + ++ +V E G L + K+ + T + LE++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 187 HDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
H + V++RD+K +N+ + KL D GL + KT + ++GT Y +PE
Sbjct: 153 HSRR---VMHRDIKPANVFITATGVVKLGDLGLGRF--FSSKTTAAHSLVGTPYYMSPER 207
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADP 306
KSD++S G +L E+ A+ + + NL + +K Q P
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEM----AALQSPFYGDKMNLYSLC-------KKIEQCDYP 256
Query: 307 TLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADV 341
L + L Q + MC+ P RP + V
Sbjct: 257 PLPSDHYSEELRQ---LVNMCINPDPEKRPDVTYV 288
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIG-YC 135
LG+G FG+VYK + + T + A K ++ + +++VE+ +L+ HP +V L+G Y
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
DG +++ E+ P G+++ + +L + L + + L +LH K +I
Sbjct: 87 HDGKLWIMI-EFCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSKR---II 139
Query: 196 YRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT-- 253
+RDLK N+L+ +L+DFG++ + S +GT + APE M +
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCETMKDT 197
Query: 254 ---LKSDVYSFGVVLLEI 268
K+D++S G+ L+E+
Sbjct: 198 PYDYKADIWSLGITLIEM 215
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIG-YC 135
LG+G FG+VYK + + T + A K ++ + +++VE+ +L+ HP +V L+G Y
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
DG +++ E+ P G+++ + +L + L + + L +LH K +I
Sbjct: 79 HDGKLWIMI-EFCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSKR---II 131
Query: 196 YRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT-- 253
+RDLK N+L+ +L+DFG++ + S +GT + APE M +
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCETMKDT 189
Query: 254 ---LKSDVYSFGVVLLEI 268
K+D++S G+ L+E+
Sbjct: 190 PYDYKADIWSLGITLIEM 207
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + E VA+K L +E L+ L M L H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLH------DLPPDKKRLDWTTRMR----IAAGA 179
NL+G C G L++ EY G L + L + P + T R ++
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 180 AKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY 239
A+G+ +L A+ I+RD+ N+LL G+ K+ DFGLA+ V
Sbjct: 174 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 240 GYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ APE T++SDV+S+G++L EI +
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF-LVEV---LMLSLLHHPNLVNL 131
++G G + +V RL+ T+++ A+K + + + + + V+ + +HP LV L
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 132 IGYCADGDQRLL-VYEYMPLGSLEDHLH---DLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
C + RL V EY+ G L H+ LP + R +A + L YLH
Sbjct: 76 HS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-------YSAEISLALNYLH 127
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTYGYCAPEY 246
++ +IYRDLK N+LL H KL+D+G+ K G GD T + GT Y APE
Sbjct: 128 ERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEI 181
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITGRKAID 276
D ++ GV++ E++ GR D
Sbjct: 182 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 94/197 (47%), Gaps = 19/197 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G+G FG V G VA+K + + + FL E +++ L H NLV L+G
Sbjct: 201 IGKGEFGDVMLGDYRGNK--VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 137 DGDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
+ L +V EYM GSL D+L + L ++ + + +EYL +
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FV 311
Query: 196 YRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT--YGYCAPEYAMTGQLT 253
+RDL N+L+ E K+SDFGL K ST+ G + APE + +
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFS 364
Query: 254 LKSDVYSFGVVLLEIIT 270
KSDV+SFG++L EI +
Sbjct: 365 TKSDVWSFGILLWEIYS 381
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 94/211 (44%), Gaps = 20/211 (9%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + E VA+K L +E L+ L M L H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHD----LPPD------KKRLDWTTRMRIAAGA 179
NL+G C G L++ EY G L + L L D L + ++
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 180 AKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY 239
A+G+ +L A+ I+RD+ N+LL G+ K+ DFGLA+ V
Sbjct: 174 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 240 GYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ APE T++SDV+S+G++L EI +
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 115/238 (48%), Gaps = 22/238 (9%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSLLHHP 126
+F +LG+G FG+V + T+++ A+K L ++ + + + +VE +L+L P
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 127 NLVNLIGYCADGDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
+ + C RL V EY+ G L H+ + R + AA A GL +
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFF 136
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVM-GTYGYCAP 244
L K +IYRDLK N++L H K++DFG+ K + D V+T+ GT Y AP
Sbjct: 137 LQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN-IWDG--VTTKXFCGTPDYIAP 190
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNT------RAAGEHNLVAWARPLFKD 296
E D ++FGV+L E++ G+ + ++ EHN VA+ + + K+
Sbjct: 191 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN-VAYPKSMSKE 247
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 12/225 (5%)
Query: 59 FTFRELAAVTKN-FRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQ---GNREFL 114
+ + E VTKN FR +LG+GGFG V ++ +T ++ A K+L++ ++ G L
Sbjct: 173 WKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMAL 232
Query: 115 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMR 174
E +L ++ +V+L D LV M G L+ H++ + + +
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM--GQAGFPEARAVF 290
Query: 175 IAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR 234
AA GLE LH + ++YRDLK NILL + H ++SD GLA P G + R
Sbjct: 291 YAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGR 345
Query: 235 VMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTR 279
V GT GY APE + T D ++ G +L E+I G+ +
Sbjct: 346 V-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ + DL KK +D + I K
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSM--------DL---KKFMDASALTGIPLPLIKSYLFQ 114
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ V T
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 229
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 230 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 258
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 94/197 (47%), Gaps = 19/197 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G+G FG V G VA+K + + + FL E +++ L H NLV L+G
Sbjct: 14 IGKGEFGDVMLGDYRGNK--VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 137 DGDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
+ L +V EYM GSL D+L + L ++ + + +EYL +
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FV 124
Query: 196 YRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYAMTGQLT 253
+RDL N+L+ E K+SDFGL K ST+ G + APE + +
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFS 177
Query: 254 LKSDVYSFGVVLLEIIT 270
KSDV+SFG++L EI +
Sbjct: 178 TKSDVWSFGILLWEIYS 194
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 77 LGEGGFGRVYKGRLESTNQ-------VVAIKQLDRNGLQGNREFLV-EVLMLSLL-HHPN 127
LGEG FG+V ++ VA+K L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD------------KKRLDWTTRMRI 175
+++L+G C ++ EY G+L ++L P ++++ + +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A+G+EYL A+ I+RDL N+L+ E K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ APE T +SDV+SFGV++ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 12/225 (5%)
Query: 59 FTFRELAAVTKN-FRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQ---GNREFL 114
+ + E VTKN FR +LG+GGFG V ++ +T ++ A K+L++ ++ G L
Sbjct: 173 WKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMAL 232
Query: 115 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMR 174
E +L ++ +V+L D LV M G L+ H++ + + +
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM--GQAGFPEARAVF 290
Query: 175 IAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR 234
AA GLE LH + ++YRDLK NILL + H ++SD GLA P G + R
Sbjct: 291 YAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGR 345
Query: 235 VMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTR 279
V GT GY APE + T D ++ G +L E+I G+ +
Sbjct: 346 V-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF-LVEV---LMLSLLHHPNLVNL 131
++G G + +V RL+ T+++ A++ + + + + + V+ + +HP LV L
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 132 IGYCADGDQRLL-VYEYMPLGSLEDHLH---DLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
C + RL V EY+ G L H+ LP + R +A + L YLH
Sbjct: 119 HS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-------YSAEISLALNYLH 170
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTYGYCAPEY 246
++ +IYRDLK N+LL H KL+D+G+ K G GD T + GT Y APE
Sbjct: 171 ERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIAPEI 224
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITGRKAID 276
D ++ GV++ E++ GR D
Sbjct: 225 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV----EVLMLSLLHHPNLVNL 131
+LG GG V+ R ++ VA+K L R L + F + E + L+HP +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 132 I----GYCADGDQRLLVYEYMPLGSLEDHLH-DLPPDKKRLDWTTRMRIAAGAAKGLEYL 186
G +V EY+ +L D +H + P KR + + A A + L +
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA-----IEVIADACQALNFS 132
Query: 187 HDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK-LGPVGDKTHVSTRVMGTYGYCAPE 245
H +I+RD+K +NIL+ K+ DFG+A+ + G+ + V+GT Y +PE
Sbjct: 133 HQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
A + +SDVYS G VL E++TG
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 19/197 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G+G FG V G VA+K + + + FL E +++ L H NLV L+G
Sbjct: 20 IGKGEFGDVMLGDYRGNK--VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 137 DGDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
+ L +V EYM GSL D+L + L ++ + + +EYL +
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FV 130
Query: 196 YRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYAMTGQLT 253
+RDL N+L+ E K+SDFGL K ST+ G + APE +
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEALREAAFS 183
Query: 254 LKSDVYSFGVVLLEIIT 270
KSDV+SFG++L EI +
Sbjct: 184 TKSDVWSFGILLWEIYS 200
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ + DL KK +D + I K
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLSM--------DL---KKFMDASALTGIPLPLIKSYLFQ 112
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ V T
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 167
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 227
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 228 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 256
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG G V T + VA+K +D + + E+ + +L+H N+V G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 136 ADGDQRLLVYEYMPLGSLEDHLH---DLP-PDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
+G+ + L EY G L D + +P PD +R ++ AG YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLHGIG- 124
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RD+K N+LL E + K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 252 LTLKS-DVYSFGVVLLEIITGRKAID 276
+ DV+S G+VL ++ G D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 77 LGEGGFGRVYKGRLESTNQ-------VVAIKQLDRNGLQGNREFLV-EVLMLSLL-HHPN 127
LGEG FG+V ++ VA+K L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD------------KKRLDWTTRMRI 175
++NL+G C ++ Y G+L ++L P ++++ + +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A+G+EYL A+ I+RDL N+L+ E K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ APE T +SDV+SFGV++ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 77 LGEGGFGRVYKGRLESTNQ-------VVAIKQLDRNGLQGNREFLV-EVLMLSLL-HHPN 127
LGEG FG+V ++ VA+K L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD------------KKRLDWTTRMRI 175
++ L+G C ++ EY G+L ++L P ++++ + +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A+G+EYL A+ I+RDL N+L+ E K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ APE T +SDV+SFGV++ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 19/231 (8%)
Query: 49 GGSDHIAAH--TFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNG 106
G DH+ A F A + ++ +LG+G FG V + + T Q A+K + +
Sbjct: 27 GPGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ 86
Query: 107 LQ---GNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD 163
++ L EV +L L HPN++ L + D LV E G L D +
Sbjct: 87 VKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI----IS 142
Query: 164 KKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLA 220
+KR RI G+ Y+H +++RDLK N+LL + + ++ DFGL+
Sbjct: 143 RKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 199
Query: 221 KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
K +GT Y APE + G K DV+S GV+L +++G
Sbjct: 200 THFEASKKMKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 111
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ T + T
Sbjct: 112 LLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 166
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 255
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 118
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ T + T
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 173
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 174 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 233
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 234 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 262
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 69 KNFRADCL-----LGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGNRE----FLVE 116
+ R +C LG+GG+G+V++ R +T ++ A+K L + + N + E
Sbjct: 12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 117 VLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIA 176
+L + HP +V+LI G + L+ EY+ G L L + ++ T +A
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLA 128
Query: 177 AGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVM 236
+ L +LH K +IYRDLK NI+L H KL+DFGL K + D T V+
Sbjct: 129 E-ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGT-VTHXFC 182
Query: 237 GTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
GT Y APE M D +S G ++ +++TG
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 69 KNFRADC-----LLGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGNRE----FLVE 116
+ R +C +LG+GG+G+V++ R +T ++ A+K L + + N + E
Sbjct: 12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 117 VLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIA 176
+L + HP +V+LI G + L+ EY+ G L L + ++ T +A
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLA 128
Query: 177 AGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVM 236
+ L +LH K +IYRDLK NI+L H KL+DFGL K + D T V+
Sbjct: 129 E-ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGT-VTHTFC 182
Query: 237 GTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
GT Y APE M D +S G ++ +++TG
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 111
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ T + T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 166
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 167 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 255
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 19/231 (8%)
Query: 49 GGSDHIAAH--TFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNG 106
G DH+ A F A + ++ +LG+G FG V + + T Q A+K + +
Sbjct: 28 GPGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ 87
Query: 107 LQ---GNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD 163
++ L EV +L L HPN++ L + D LV E G L D +
Sbjct: 88 VKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI----IS 143
Query: 164 KKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLA 220
+KR RI G+ Y+H +++RDLK N+LL + + ++ DFGL+
Sbjct: 144 RKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 200
Query: 221 KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
K +GT Y APE + G K DV+S GV+L +++G
Sbjct: 201 THFEASKKMKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 118
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ T + T
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 173
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 174 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 233
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 234 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 262
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 115
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ T + T
Sbjct: 116 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 170
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 230
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 231 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 259
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 117/272 (43%), Gaps = 40/272 (14%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHH--PNLVNLIGY 134
+G G G+V+K R T V+A+KQ+ R+G + + ++ L + L H P +V G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRI----AAGAAKGLEYLHDKA 190
+ E M G+ + L KKR+ RI K L YL +K
Sbjct: 93 FITNTDVFIAMELM--GTCAEKL------KKRMQGPIPERILGKMTVAIVKALYYLKEKH 144
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVSTRVMGTYGYCAPEYAMT 249
VI+RD+K SNILL E KL DFG++ +L V DK R G Y APE
Sbjct: 145 G--VIHRDVKPSNILLDERGQIKLCDFGISGRL--VDDK--AKDRSAGCAAYMAPERIDP 198
Query: 250 GQLT-----LKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMA 304
T +++DV+S G+ L+E+ TG+ N + F+ K Q
Sbjct: 199 PDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD------------FEVLTKVLQEE 246
Query: 305 DPTLQGQYPVRGLYQALAVAAMCVQEQPNMRP 336
P L G G +Q+ C+ + RP
Sbjct: 247 PPLLPGHMGFSGDFQSF--VKDCLTKDHRKRP 276
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 8/198 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGL-QGNREFLV-EVLMLSLLHHPNLVNLIGY 134
+G G +GR K R +S +++ K+LD + + ++ LV EV +L L HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 135 CADGDQRLL--VYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN- 191
D L V EY G L + +++ LD +R+ L+ H +++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 192 -PPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTG 250
V++RDLK +N+ L + KL DFGLA++ + + +GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDEDFAKEFVGTPYYMSPEQMNRM 191
Query: 251 QLTLKSDVYSFGVVLLEI 268
KSD++S G +L E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 102/228 (44%), Gaps = 19/228 (8%)
Query: 52 DHIAAH--TFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQ- 108
DH+ A F A + ++ +LG+G FG V + + T Q A+K + + ++
Sbjct: 7 DHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ 66
Query: 109 --GNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKR 166
L EV +L L HPN++ L + D LV E G L D + +KR
Sbjct: 67 KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI----ISRKR 122
Query: 167 LDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLAKLG 223
RI G+ Y+H +++RDLK N+LL + + ++ DFGL+
Sbjct: 123 FSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179
Query: 224 PVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
K +GT Y APE + G K DV+S GV+L +++G
Sbjct: 180 EASKKMKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 111
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ T + T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 166
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 255
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 110
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ T + T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 165
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 225
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 226 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 254
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 110
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ T + T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 165
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 225
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 226 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 254
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 73 ADCLLGEGGFGRVYKG--RLESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLV 129
AD LG G FG V +G R+ VAIK L + + + E + E ++ L +P +V
Sbjct: 14 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 73
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
LIG C + +LV E G L L ++ + + + + G++YL +K
Sbjct: 74 RLIGVC-QAEALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK 129
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK-LGPVGDKTHVSTRVMGTY--GYCAPEY 246
++RDL N+LL ++ K+SDFGL+K LG D ++ + R G + + APE
Sbjct: 130 N---FVHRDLAARNVLLVNRHYAKISDFGLSKALG--ADDSYYTARSAGKWPLKWYAPEC 184
Query: 247 AMTGQLTLKSDVYSFGVVLLEIIT 270
+ + +SDV+S+GV + E ++
Sbjct: 185 INFRKFSSRSDVWSYGVTMWEALS 208
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGN--REFLVEVLMLSLLHHPN 127
N+R +G+G F +V R T + VA+K +D+ L + ++ EV ++ +L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHL--HDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
+V L LV EY G + D+L H +K + + R A ++Y
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFRQIVSA---VQY 128
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
H K +++RDLK N+LL + K++DFG + G+K G+ Y APE
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE 182
Query: 246 YAMTGQLT-LKSDVYSFGVVLLEIITGRKAID 276
+ + DV+S GV+L +++G D
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 77 LGEGGFGRVYKGRLESTNQ-------VVAIKQLDRNGLQGNREFLV-EVLMLSLL-HHPN 127
LGEG FG+V ++ VA+K L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD------------KKRLDWTTRMRI 175
++NL+G C ++ Y G+L ++L P ++++ + +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A+G+EYL A+ I+RDL N+L+ E K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ APE T +SDV+SFGV++ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 112
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ T + T
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 167
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 227
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 228 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 256
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 113
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ V T
Sbjct: 114 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 168
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 228
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 229 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 257
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 111
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ T + T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 166
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 255
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 113
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ V T
Sbjct: 114 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 168
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 228
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 229 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 257
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGN--REFLVEVLMLSLLHHPN 127
N+R +G+G F +V R T + VAIK +D+ L ++ EV ++ +L+HPN
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHL--HDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
+V L L+ EY G + D+L H +K + ++ R A ++Y
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK---EARSKFRQIVSA---VQY 126
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
H K +++RDLK N+LL + K++DFG + VG K G+ Y APE
Sbjct: 127 CHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPE 180
Query: 246 YAMTGQLT-LKSDVYSFGVVLLEIITGRKAID 276
+ + DV+S GV+L +++G D
Sbjct: 181 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV----EVLMLSLLHHPNLVNL 131
+LG GG V+ R ++ VA+K L R L + F + E + L+HP +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 132 I----GYCADGDQRLLVYEYMPLGSLEDHLH-DLPPDKKRLDWTTRMRIAAGAAKGLEYL 186
G +V EY+ +L D +H + P KR + + A A + L +
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA-----IEVIADACQALNFS 132
Query: 187 HDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK-LGPVGDKTHVSTRVMGTYGYCAPE 245
H +I+RD+K +NI++ K+ DFG+A+ + G+ + V+GT Y +PE
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
A + +SDVYS G VL E++TG
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 32/218 (14%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLV 129
+F+ L+G GGFG+V+K + + IK++ N + R EV L+ L H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIV 67
Query: 130 NLIGYCADGDQR-----------------LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTR 172
+ G C DG + E+ G+LE + +K LD
Sbjct: 68 HYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK--LDKVLA 124
Query: 173 MRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGL-AKLGPVGDKTHV 231
+ + KG++Y+H K +I RDLK SNI L + K+ DFGL L G +
Sbjct: 125 LELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--- 178
Query: 232 STRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEII 269
R GT Y +PE + + D+Y+ G++L E++
Sbjct: 179 -XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV----EVLMLSLLHHPNLVNL 131
+LG GG V+ R ++ VA+K L R L + F + E + L+HP +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 132 IGY----CADGDQRLLVYEYMPLGSLEDHLH-DLPPDKKRLDWTTRMRIAAGAAKGLEYL 186
G +V EY+ +L D +H + P KR + + A A + L +
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA-----IEVIADACQALNFS 132
Query: 187 HDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK-LGPVGDKTHVSTRVMGTYGYCAPE 245
H +I+RD+K +NI++ K+ DFG+A+ + G+ + V+GT Y +PE
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
A + +SDVYS G VL E++TG
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGN--REFLVEVLMLSLLHHPN 127
N+R +G+G F +V R T + VA+K +D+ L + ++ EV ++ +L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHL--HDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
+V L LV EY G + D+L H +K + + R A ++Y
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFRQIVSA---VQY 128
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
H K +++RDLK N+LL + K++DFG + G+K G+ Y APE
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE 182
Query: 246 YAMTGQLT-LKSDVYSFGVVLLEIITGRKAID 276
+ + DV+S GV+L +++G D
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 122/264 (46%), Gaps = 37/264 (14%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA---GAAKGL 183
N+V L+ ++ LV+E++ + L+D + D L I + +GL
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSM-DLKDFM-----DASALTGIPLPLIKSYLFQLLQGL 119
Query: 184 EYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCA 243
+ H V++RDLK N+L+ KL+DFGLA+ V +T+ V T Y A
Sbjct: 120 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 174
Query: 244 PEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLVAWA-- 290
PE + + + D++S G + E++T G ID R G + V W
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 291 ------RPLFKD--RRKFSQMADP 306
+P F R+ FS++ P
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPP 258
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 114
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ V T
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 229
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 230 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 258
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 114
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ V T
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 229
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 230 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 258
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 113
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ V T
Sbjct: 114 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 168
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 228
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 229 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 257
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV----EVLMLSLLHHPNLVNL 131
+LG GG V+ R ++ VA+K L R L + F + E + L+HP +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 132 I----GYCADGDQRLLVYEYMPLGSLEDHLH-DLPPDKKRLDWTTRMRIAAGAAKGLEYL 186
G +V EY+ +L D +H + P KR + + A A + L +
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA-----IEVIADACQALNFS 132
Query: 187 HDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK-LGPVGDKTHVSTRVMGTYGYCAPE 245
H +I+RD+K +NI++ K+ DFG+A+ + G+ + V+GT Y +PE
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
A + +SDVYS G VL E++TG
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 122/264 (46%), Gaps = 37/264 (14%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA---GAAKGL 183
N+V L+ ++ LV+E++ + L+D + D L I + +GL
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSM-DLKDFM-----DASALTGIPLPLIKSYLFQLLQGL 118
Query: 184 EYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCA 243
+ H V++RDLK N+L+ KL+DFGLA+ V +T+ V T Y A
Sbjct: 119 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 173
Query: 244 PEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLVAWA-- 290
PE + + + D++S G + E++T G ID R G + V W
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 291 ------RPLFKD--RRKFSQMADP 306
+P F R+ FS++ P
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPP 257
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGN--REFLVEVLMLSLLHHPN 127
N+R +G+G F +V R T + VA+K +D+ L + ++ EV ++ +L+HPN
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHL--HDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
+V L LV EY G + D+L H +K + + R A ++Y
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEK---EARAKFRQIVSA---VQY 121
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
H K +++RDLK N+LL + K++DFG + G+K G+ Y APE
Sbjct: 122 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE 175
Query: 246 YAMTGQLT-LKSDVYSFGVVLLEIITGRKAID 276
+ + DV+S GV+L +++G D
Sbjct: 176 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 112
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ V T
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 167
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 227
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 228 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 256
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 111
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ V T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 166
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 255
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV----EVLMLSLLHHPNLVNL 131
+LG GG V+ R ++ VA+K L R L + F + E + L+HP +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 132 I----GYCADGDQRLLVYEYMPLGSLEDHLH-DLPPDKKRLDWTTRMRIAAGAAKGLEYL 186
G +V EY+ +L D +H + P KR + + A A + L +
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA-----IEVIADACQALNFS 132
Query: 187 HDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK-LGPVGDKTHVSTRVMGTYGYCAPE 245
H +I+RD+K +NI++ K+ DFG+A+ + G+ + V+GT Y +PE
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
A + +SDVYS G VL E++TG
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 115
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ V T
Sbjct: 116 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 170
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 230
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 231 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 259
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 110
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ V T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 165
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 225
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 226 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 254
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 111
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ V T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 166
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 255
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 111
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ V T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 166
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 255
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+GEG G V + S+ ++VA+K++D Q EV+++ H N+V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
GD+ +V E++ G+L D + R++ + + L LH + VI+
Sbjct: 219 VGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 270
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RD+K +ILL KLSDFG V + ++GT + APE +
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 257 DVYSFGVVLLEIITG 271
D++S G++++E++ G
Sbjct: 329 DIWSLGIMVIEMVDG 343
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGN--REFLVEVLMLSLLHHPN 127
N+R +G+G F +V R T + VAIK +D+ L ++ EV ++ +L+HPN
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHL--HDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
+V L L+ EY G + D+L H +K + ++ R A ++Y
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK---EARSKFRQIVSA---VQY 129
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
H K +++RDLK N+LL + K++DFG + VG K G Y APE
Sbjct: 130 CHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAAPE 183
Query: 246 YAMTGQLT-LKSDVYSFGVVLLEIITGRKAID 276
+ + DV+S GV+L +++G D
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 110
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ V T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 165
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 225
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 226 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 254
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 112
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ V T
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 167
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 227
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 228 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 256
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 112
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ V T
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 167
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 227
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 228 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 256
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGN--REFLVEVLMLSLLHHPN 127
N+R +G+G F +V R T + VA+K +D+ L + ++ EV ++ +L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHL--HDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
+V L LV EY G + D+L H +K + + R A ++Y
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFRQIVSA---VQY 128
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
H K +++RDLK N+LL + K++DFG + G+K G Y APE
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPE 182
Query: 246 YAMTGQLT-LKSDVYSFGVVLLEIITGRKAID 276
+ + DV+S GV+L +++G D
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 73 ADCLLGEGGFGRVYKG--RLESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLV 129
AD LG G FG V +G R+ VAIK L + + + E + E ++ L +P +V
Sbjct: 340 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
LIG C + +LV E G L L ++ + + + + G++YL +K
Sbjct: 400 RLIGVC-QAEALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK 455
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK-LGPVGDKTHVSTRVMGTY--GYCAPEY 246
++R+L N+LL ++ K+SDFGL+K LG D ++ + R G + + APE
Sbjct: 456 N---FVHRNLAARNVLLVNRHYAKISDFGLSKALG--ADDSYYTARSAGKWPLKWYAPEC 510
Query: 247 AMTGQLTLKSDVYSFGVVLLEIIT 270
+ + +SDV+S+GV + E ++
Sbjct: 511 INFRKFSSRSDVWSYGVTMWEALS 534
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 67 VTKNFRADCL-----LGEGGFGRVYKGRLESTNQVVAIK-----QLDRNGLQGNREFLVE 116
+T++F D LG+G FG VY R + ++ +VA+K Q+++ G++ + E
Sbjct: 16 LTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVE--HQLRRE 73
Query: 117 VLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIA 176
+ + + LHHPN++ L Y D + L+ EY P G L L D I
Sbjct: 74 IEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQ----KSCTFDEQRTATIM 129
Query: 177 AGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGP-VGDKTHVSTRV 235
A L Y H K VI+RD+K N+LLG K++DFG + P + KT +
Sbjct: 130 EELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKT-----M 181
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
GT Y PE K D++ GV+ E++ G
Sbjct: 182 CGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 45/231 (19%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLV 129
+F+ L+G GGFG+V+K + + I+++ N + RE V L+ L H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIV 68
Query: 130 NLIGYCADG--------DQRLLVYEYMP----------------------LGSLEDHLHD 159
+ G C DG D L +Y P G+LE +
Sbjct: 69 HYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 160 LPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGL 219
+K LD + + KG++Y+H K +I+RDLK SNI L + K+ DFGL
Sbjct: 128 RRGEK--LDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGL 182
Query: 220 -AKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEII 269
L G + TR GT Y +PE + + D+Y+ G++L E++
Sbjct: 183 VTSLKNDGKR----TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 111
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ V T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 166
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 255
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGN--REFLVEVLMLSLLHHPN 127
N+R +G+G F +V R T + VA++ +D+ L + ++ EV ++ +L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHL--HDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
+V L LV EY G + D+L H +K + + R A ++Y
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFRQIVSA---VQY 128
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
H K +++RDLK N+LL + K++DFG + G+K G+ Y APE
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE 182
Query: 246 YAMTGQLT-LKSDVYSFGVVLLEIITGRKAID 276
+ + DV+S GV+L +++G D
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGN--REFLVEVLMLSLLHHPN 127
N+R +G+G F +V R T + VA++ +D+ L + ++ EV ++ +L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHL--HDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
+V L LV EY G + D+L H +K + + R A ++Y
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFRQIVSA---VQY 128
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
H K +++RDLK N+LL + K++DFG + G+K G+ Y APE
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DEFCGSPPYAAPE 182
Query: 246 YAMTGQLT-LKSDVYSFGVVLLEIITGRKAID 276
+ + DV+S GV+L +++G D
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 59 FTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQ---GNREFLV 115
F A + ++ +LG+G FG V + + T Q A+K + + ++ L
Sbjct: 22 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 81
Query: 116 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRI 175
EV +L L HPN++ L + D LV E G L D + +KR RI
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARI 137
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLAKLGPVGDKTHVS 232
G+ Y+H +++RDLK N+LL + + ++ DFGL+ K
Sbjct: 138 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 194
Query: 233 TRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
+GT Y APE + G K DV+S GV+L +++G
Sbjct: 195 ---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHVD--------QDL---KKFMDASALTGIPLPLIKSYLFQ 114
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ V T
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 229
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 230 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 258
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV----EVLMLSLLHHPNLVNL 131
+LG GG V+ R ++ VA+K L R L + F + E + L+HP +V +
Sbjct: 36 ILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 94
Query: 132 I----GYCADGDQRLLVYEYMPLGSLEDHLH-DLPPDKKRLDWTTRMRIAAGAAKGLEYL 186
G +V EY+ +L D +H + P KR + + A A + L +
Sbjct: 95 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA-----IEVIADACQALNFS 149
Query: 187 HDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK-LGPVGDKTHVSTRVMGTYGYCAPE 245
H +I+RD+K +NI++ K+ DFG+A+ + G+ + V+GT Y +PE
Sbjct: 150 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 206
Query: 246 YAMTGQLTLKSDVYSFGVVLLEIITG 271
A + +SDVYS G VL E++TG
Sbjct: 207 QARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+GEG G V + S+ ++VA+K++D Q EV+++ H N+V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
GD+ +V E++ G+L D + R++ + + L LH + VI+
Sbjct: 97 VGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 148
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RD+K +ILL KLSDFG V + ++GT + APE +
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 257 DVYSFGVVLLEIITG 271
D++S G++++E++ G
Sbjct: 207 DIWSLGIMVIEMVDG 221
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGN--REFLVEVLMLSLLHHPN 127
N+R +G+G F +V R T + VA+K +D+ L + ++ EV + +L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
+V L LV EY G + D+L K++ + + R A ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEK-EARAKFRQIVSA---VQYCH 130
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYA 247
K +++RDLK N+LL + K++DFG + G+K G Y APE
Sbjct: 131 QKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELF 184
Query: 248 MTGQLT-LKSDVYSFGVVLLEIITGRKAID 276
+ + DV+S GV+L +++G D
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+GEG G V + S+ ++VA+K++D Q EV+++ H N+V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
GD+ +V E++ G+L D + R++ + + L LH + VI+
Sbjct: 99 VGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 150
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RD+K +ILL KLSDFG V + ++GT + APE +
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 257 DVYSFGVVLLEIITG 271
D++S G++++E++ G
Sbjct: 209 DIWSLGIMVIEMVDG 223
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+GEG G V + S+ ++VA+K++D Q EV+++ H N+V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
GD+ +V E++ G+L D + R++ + + L LH + VI+
Sbjct: 88 VGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 139
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RD+K +ILL KLSDFG V + ++GT + APE +
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 257 DVYSFGVVLLEIITG 271
D++S G++++E++ G
Sbjct: 198 DIWSLGIMVIEMVDG 212
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 74 DCLLGEGGFGRVYKGRLE----STNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLV 129
D LG G FG V KG + V I + + N E L E ++ L +P +V
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
+IG C + + +LV E LG L +L + + + + + G++YL +
Sbjct: 434 RMIGIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES 488
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYA 247
++RDL N+LL ++ K+SDFGL+K D+ + + G + + APE
Sbjct: 489 N---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 544
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ + KSDV+SFGV++ E +
Sbjct: 545 NYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 98/220 (44%), Gaps = 34/220 (15%)
Query: 77 LGEGGFGRVYK----GRLES-TNQVVAIKQLDRNGLQGNREFLV-EVLMLSLL-HHPNLV 129
LG G FG+V + G ++S VA+K L + RE L+ E+ +LS L +H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTR----------------- 172
NL+G C G L++ EY G L + L +KR +
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLR-----RKRDSFICSKTSPAIMEDDELALDLE 161
Query: 173 --MRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH 230
+ + AKG+ +L K I+RDL NILL G K+ DFGLA+
Sbjct: 162 DLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 231 VSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
V + APE T +SDV+S+G+ L E+ +
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+GEG G V + S+ ++VA+K++D Q EV+++ H N+V +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
GD+ +V E++ G+L D + R++ + + L LH + VI+
Sbjct: 142 VGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 193
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RD+K +ILL KLSDFG V + ++GT + APE +
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 257 DVYSFGVVLLEIITG 271
D++S G++++E++ G
Sbjct: 252 DIWSLGIMVIEMVDG 266
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 122/270 (45%), Gaps = 49/270 (18%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLH-DLPPDKKRLDWTTRMRIAAGAAK---- 181
N+V L+ ++ LV+E H+H DL K +D + I K
Sbjct: 62 NIVKLLDVIHTENKLYLVFE---------HVHQDL---KTFMDASALTGIPLPLIKSYLF 109
Query: 182 ----GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMG 237
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ T +
Sbjct: 110 QLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVV 164
Query: 238 TYGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNL 286
T Y APE + + + D++S G + E++T G ID R G +
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 287 VAWA--------RPLFKD--RRKFSQMADP 306
V W +P F R+ FS++ P
Sbjct: 225 VVWPGVTSMPDYKPSFPKWARQDFSKVVPP 254
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+GEG G V + S+ ++VA+K++D Q EV+++ H N+V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
GD+ +V E++ G+L D + R++ + + L LH + VI+
Sbjct: 92 VGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 143
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RD+K +ILL KLSDFG V + ++GT + APE +
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 257 DVYSFGVVLLEIITG 271
D++S G++++E++ G
Sbjct: 202 DIWSLGIMVIEMVDG 216
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 102/216 (47%), Gaps = 32/216 (14%)
Query: 70 NFRADCLLGEGGFGRVY---KGRLESTNQVVAIKQL--------DRNGLQGNREFLVEVL 118
F +LG+G FG+V+ K Q+ A+K L DR + R+ LVEV
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV- 83
Query: 119 MLSLLHHPNLVNLIGYCADGDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTR--MRI 175
+HP +V L Y + +L L+ +++ G L L K + +T
Sbjct: 84 -----NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFY 131
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A A L++LH +IYRDLK NILL E H KL+DFGL+K +K S
Sbjct: 132 LAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--F 186
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
GT Y APE T +D +SFGV++ E++TG
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 74 DCLLGEGGFGRVYKGRLE----STNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLV 129
D LG G FG V KG + V I + + N E L E ++ L +P +V
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
+IG C + + +LV E LG L +L + + + + + G++YL +
Sbjct: 435 RMIGIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES 489
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYA 247
++RDL N+LL ++ K+SDFGL+K D+ + + G + + APE
Sbjct: 490 N---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 545
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ + KSDV+SFGV++ E +
Sbjct: 546 NYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 100/228 (43%), Gaps = 19/228 (8%)
Query: 52 DHIAAH--TFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQ- 108
DH+ A F A + ++ +LG+G FG V + + T Q A+K + + ++
Sbjct: 7 DHLHATPGXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ 66
Query: 109 --GNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKR 166
L EV +L L HPN+ L + D LV E G L D + +KR
Sbjct: 67 KTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI----ISRKR 122
Query: 167 LDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLAKLG 223
RI G+ Y H +++RDLK N+LL + + ++ DFGL+
Sbjct: 123 FSEVDAARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179
Query: 224 PVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
K +GT Y APE + G K DV+S GV+L +++G
Sbjct: 180 EASKKXKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 77 LGEGGFGRVYK----GRLES-TNQVVAIKQLDRNGLQGNREFLV-EVLMLSLL-HHPNLV 129
LG G FG+V + G ++S VA+K L + RE L+ E+ +LS L +H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHD--------------LPPDKKRLDWTTRMRI 175
NL+G C G L++ EY G L + L + D+ LD +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
+ AKG+ +L K I+RDL NILL G K+ DFGLA+ V
Sbjct: 174 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ APE T +SDV+S+G+ L E+ +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 121/264 (45%), Gaps = 37/264 (14%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA---GAAKGL 183
N+V L+ ++ LV+E++ L+D + D L I + +GL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-QDLKDFM-----DASALTGIPLPLIKSYLFQLLQGL 116
Query: 184 EYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCA 243
+ H V++RDLK N+L+ KL+DFGLA+ V +T+ V T Y A
Sbjct: 117 AFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 171
Query: 244 PEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLVAWA-- 290
PE + + + D++S G + E++T G ID R G + V W
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 291 ------RPLFKD--RRKFSQMADP 306
+P F R+ FS++ P
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPP 255
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+ + LD + E+ +L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 111
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ T + T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 166
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 255
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+ + LD + E+ +L L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL KK +D + I K
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYLFQ 110
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ T + T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 165
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 225
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 226 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 254
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 76 LLGEGGFGRVYKG-----RLESTNQVVAIKQLDRNGLQGNRE-FLVEVLMLSLLHHPNLV 129
+LGEG FG VY+G + E N VA+K ++ N+E F+ E +++ L HP++V
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKIN--VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
LIG + + ++ E P G L H L +K L T + + K + YL
Sbjct: 73 KLIG-IIEEEPTWIIMELYPYGELG---HYLERNKNSLKVLTLVLYSLQICKAMAYLE-- 126
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMT 249
+ ++RD+ NIL+ KL DFGL++ D S + + +PE
Sbjct: 127 -SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSPESINF 184
Query: 250 GQLTLKSDVYSFGVVLLEIIT 270
+ T SDV+ F V + EI++
Sbjct: 185 RRFTTASDVWMFAVCMWEILS 205
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 18/202 (8%)
Query: 76 LLGEGGFGRVYKG-----RLESTNQVVAIKQLDRNGLQGNRE-FLVEVLMLSLLHHPNLV 129
+LGEG FG VY+G + E N VA+K ++ N+E F+ E +++ L HP++V
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKIN--VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
LIG + + ++ E P G L H L +K L T + + K + YL
Sbjct: 89 KLIGIIEE-EPTWIIMELYPYGELG---HYLERNKNSLKVLTLVLYSLQICKAMAYLE-- 142
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT-YGYCAPEYAM 248
+ ++RD+ NIL+ KL DFGL++ + D+ + V + +PE
Sbjct: 143 -SINCVHRDIAVRNILVASPECVKLGDFGLSRY--IEDEDYYKASVTRLPIKWMSPESIN 199
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ T SDV+ F V + EI++
Sbjct: 200 FRRFTTASDVWMFAVCMWEILS 221
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 74 DCLLGEGGFGRVYKGRLE----STNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLV 129
D LG G FG V KG + V I + + N E L E ++ L +P +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
+IG C + + +LV E LG L +L + + + + + G++YL +
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES 146
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYA 247
++RDL N+LL ++ K+SDFGL+K D+ + + G + + APE
Sbjct: 147 N---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ + KSDV+SFGV++ E +
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 74 DCLLGEGGFGRVYKGRLE----STNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLV 129
D LG G FG V KG + V I + + N E L E ++ L +P +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
+IG C + + +LV E LG L +L + + + + + G++YL +
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES 146
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYA 247
++RDL N+LL ++ K+SDFGL+K D+ + + G + + APE
Sbjct: 147 N---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ + KSDV+SFGV++ E +
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 98/220 (44%), Gaps = 34/220 (15%)
Query: 77 LGEGGFGRVYK----GRLES-TNQVVAIKQLDRNGLQGNREFLV-EVLMLSLL-HHPNLV 129
LG G FG+V + G ++S VA+K L + RE L+ E+ +LS L +H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTR----------------- 172
NL+G C G L++ EY G L + L +KR +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLR-----RKRDSFICSKTSPAIMEDDELALDLE 145
Query: 173 --MRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH 230
+ + AKG+ +L K I+RDL NILL G K+ DFGLA+
Sbjct: 146 DLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 231 VSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
V + APE T +SDV+S+G+ L E+ +
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 18/202 (8%)
Query: 76 LLGEGGFGRVYKG-----RLESTNQVVAIKQLDRNGLQGNRE-FLVEVLMLSLLHHPNLV 129
+LGEG FG VY+G + E N VA+K ++ N+E F+ E +++ L HP++V
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKIN--VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
LIG + + ++ E P G L H L +K L T + + K + YL
Sbjct: 77 KLIGIIEE-EPTWIIMELYPYGELG---HYLERNKNSLKVLTLVLYSLQICKAMAYLE-- 130
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT-YGYCAPEYAM 248
+ ++RD+ NIL+ KL DFGL++ + D+ + V + +PE
Sbjct: 131 -SINCVHRDIAVRNILVASPECVKLGDFGLSRY--IEDEDYYKASVTRLPIKWMSPESIN 187
Query: 249 TGQLTLKSDVYSFGVVLLEIIT 270
+ T SDV+ F V + EI++
Sbjct: 188 FRRFTTASDVWMFAVCMWEILS 209
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 99/226 (43%), Gaps = 18/226 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR-EFLVEVLMLSLLHHPNLVNLIGYC 135
+G GGF +V T ++VAIK +D+N L + E+ L L H ++ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
++ +V EY P G L D++ + RL + + Y+H +
Sbjct: 78 ETANKIFMVLEYCPGGELFDYI----ISQDRLSEEETRVVFRQIVSAVAYVHSQG---YA 130
Query: 196 YRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM-TGQLTL 254
+RDLK N+L E + KL DFGL P G+K + G+ Y APE L
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGS 189
Query: 255 KSDVYSFGVVLLEIITGRKAIDNTRAA--------GEHNLVAWARP 292
++DV+S G++L ++ G D+ G++++ W P
Sbjct: 190 EADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSP 235
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 98/220 (44%), Gaps = 34/220 (15%)
Query: 77 LGEGGFGRVYK----GRLES-TNQVVAIKQLDRNGLQGNREFLV-EVLMLSLL-HHPNLV 129
LG G FG+V + G ++S VA+K L + RE L+ E+ +LS L +H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTR----------------- 172
NL+G C G L++ EY G L + L +KR +
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLR-----RKRDSFICSKTSPAIMEDDELALDLE 163
Query: 173 --MRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH 230
+ + AKG+ +L K I+RDL NILL G K+ DFGLA+
Sbjct: 164 DLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
Query: 231 VSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
V + APE T +SDV+S+G+ L E+ +
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 102/216 (47%), Gaps = 32/216 (14%)
Query: 70 NFRADCLLGEGGFGRVY---KGRLESTNQVVAIKQL--------DRNGLQGNREFLVEVL 118
F +LG+G FG+V+ K Q+ A+K L DR + R+ LVEV
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV- 83
Query: 119 MLSLLHHPNLVNLIGYCADGDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTR--MRI 175
+HP +V L Y + +L L+ +++ G L L K + +T
Sbjct: 84 -----NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFY 131
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A A L++LH +IYRDLK NILL E H KL+DFGL+K +K S
Sbjct: 132 LAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--F 186
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
GT Y APE T +D +SFGV++ E++TG
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 120/269 (44%), Gaps = 47/269 (17%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHP 126
+NF+ +GEG +G VYK R + T +VVA+K+ LD + E+ +L L+HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK----- 181
N+V L+ ++ LV+E++ DL K +D + I K
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLH--------QDL---KTFMDASALTGIPLPLIKSYLFQ 114
Query: 182 ---GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
GL + H V++RDLK N+L+ KL+DFGLA+ V +T+ V T
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 239 YGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT------GRKAIDNT----RAAGEHNLV 287
Y APE + + + D++S G + E++T G ID R G + V
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 229
Query: 288 AWA--------RPLFKD--RRKFSQMADP 306
W +P F R+ FS++ P
Sbjct: 230 VWPGVTSMPDYKPSFPKWARQDFSKVVPP 258
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 102/216 (47%), Gaps = 32/216 (14%)
Query: 70 NFRADCLLGEGGFGRVY---KGRLESTNQVVAIKQL--------DRNGLQGNREFLVEVL 118
F +LG+G FG+V+ K Q+ A+K L DR + R+ LVEV
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV- 84
Query: 119 MLSLLHHPNLVNLIGYCADGDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTR--MRI 175
+HP +V L Y + +L L+ +++ G L L K + +T
Sbjct: 85 -----NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFY 132
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A A L++LH +IYRDLK NILL E H KL+DFGL+K +K S
Sbjct: 133 LAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--F 187
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
GT Y APE T +D +SFGV++ E++TG
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 94/211 (44%), Gaps = 15/211 (7%)
Query: 66 AVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNRE---FLVE-VLMLS 121
A +F ++G+G FG+V R ++ A+K L + + +E + E ++L
Sbjct: 35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLK 94
Query: 122 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRI-AAGAA 180
+ HP LV L D+ V +Y+ G L HL ++R R R AA A
Sbjct: 95 NVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQ-----RERCFLEPRARFYAAEIA 149
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
L YLH ++YRDLK NILL H L+DFGL K + T ++ GT
Sbjct: 150 SALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFCGTPE 204
Query: 241 YCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
Y APE D + G VL E++ G
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 98/220 (44%), Gaps = 34/220 (15%)
Query: 77 LGEGGFGRVYK----GRLES-TNQVVAIKQLDRNGLQGNREFLV-EVLMLSLL-HHPNLV 129
LG G FG+V + G ++S VA+K L + RE L+ E+ +LS L +H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTR----------------- 172
NL+G C G L++ EY G L + L +KR +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLR-----RKRDSFICSKTSPAIMEDDELALDLE 168
Query: 173 --MRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTH 230
+ + AKG+ +L K I+RDL NILL G K+ DFGLA+
Sbjct: 169 DLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 225
Query: 231 VSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
V + APE T +SDV+S+G+ L E+ +
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 74 DCLLGEGGFGRVYKGRLE----STNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLV 129
D LG G FG V KG + V I + + N E L E ++ L +P +V
Sbjct: 30 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
+IG C + + +LV E LG L +L + + + + + G++YL +
Sbjct: 90 RMIGIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES 144
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYA 247
++RDL N+LL ++ K+SDFGL+K D+ + + G + + APE
Sbjct: 145 N---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 200
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ + KSDV+SFGV++ E +
Sbjct: 201 NYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG-LQGN--REFLVEVLMLSLLHHPNLVNLIG 133
+G+G FG+V + T ++ A+K +++ ++ N R E+ ++ L HP LVNL
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D + +V + + G L HL K+ T ++ I L+YL N
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE---TVKLFICE-LVMALDYLQ---NQR 135
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ-- 251
+I+RD+K NILL E H ++DF +A + P +T ++T + GT Y APE + +
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAAMLP--RETQITT-MAGTKPYMAPEMFSSRKGA 192
Query: 252 -LTLKSDVYSFGVVLLEIITGRK 273
+ D +S GV E++ GR+
Sbjct: 193 GYSFAVDWWSLGVTAYELLRGRR 215
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGY 134
+GEG +G VYK + +S ++VA+K+ LD + E+ +L LHHPN+V+LI
Sbjct: 29 VGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA-GAAKGLEYLHDKANPP 193
LV+E+M E L + + K ++++I +G+ + H
Sbjct: 88 IHSERCLTLVFEFM-----EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR--- 139
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLG--PVGDKTHVSTRVMGTYGYCAPEYAM-TG 250
+++RDLK N+L+ KL+DFGLA+ PV TH T Y AP+ M +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYRAPDVLMGSK 195
Query: 251 QLTLKSDVYSFGVVLLEIITGR 272
+ + D++S G + E+ITG+
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGY 134
+GEG +G VYK + +S ++VA+K+ LD + E+ +L LHHPN+V+LI
Sbjct: 29 VGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA-GAAKGLEYLHDKANPP 193
LV+E+M E L + + K ++++I +G+ + H
Sbjct: 88 IHSERCLTLVFEFM-----EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR--- 139
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLG--PVGDKTHVSTRVMGTYGYCAPEYAM-TG 250
+++RDLK N+L+ KL+DFGLA+ PV TH T Y AP+ M +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYRAPDVLMGSK 195
Query: 251 QLTLKSDVYSFGVVLLEIITGR 272
+ + D++S G + E+ITG+
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGK 217
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 74 DCLLGEGGFGRVYKGRLE----STNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLV 129
D LG G FG V KG + V I + + N E L E ++ L +P +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
+IG C + + +LV E LG L +L K + + + + G++YL +
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK----NIIELVHQVSMGMKYLEES 130
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYA 247
++RDL N+LL ++ K+SDFGL+K D+ + + G + + APE
Sbjct: 131 N---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 186
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ + KSDV+SFGV++ E +
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 74 DCLLGEGGFGRVYKGRLE----STNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLV 129
D LG G FG V KG + V I + + N E L E ++ L +P +V
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
+IG C + + +LV E LG L +L K + + + + G++YL +
Sbjct: 82 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK----NIIELVHQVSMGMKYLEES 136
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYA 247
++RDL N+LL ++ K+SDFGL+K D+ + + G + + APE
Sbjct: 137 N---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 192
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ + KSDV+SFGV++ E +
Sbjct: 193 NYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 74 DCLLGEGGFGRVYKGRLE----STNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLV 129
D LG G FG V KG + V I + + N E L E ++ L +P +V
Sbjct: 12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
+IG C + + +LV E LG L +L K + + + + G++YL +
Sbjct: 72 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK----NIIELVHQVSMGMKYLEE- 125
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYA 247
++RDL N+LL ++ K+SDFGL+K D+ + + G + + APE
Sbjct: 126 --SNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 182
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ + KSDV+SFGV++ E +
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 74 DCLLGEGGFGRVYKGRLE----STNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLV 129
D LG G FG V KG + V I + + N E L E ++ L +P +V
Sbjct: 10 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
+IG C + + +LV E LG L +L K + + + + G++YL +
Sbjct: 70 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK----NIIELVHQVSMGMKYLEE- 123
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYA 247
++RDL N+LL ++ K+SDFGL+K D+ + + G + + APE
Sbjct: 124 --SNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 180
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ + KSDV+SFGV++ E +
Sbjct: 181 NYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR---EFLVEVLMLSLLHHPNLVNLIG 133
LG G FG+V G + T VA+K L+R ++ + E+ L L HP+++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
+ +V EY+ G L D++ R++ R+ ++Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYI----CKHGRVEEMEARRLFQQILSAVDYCHRHM--- 131
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
V++RDLK N+LL + K++DFGL+ + G+ S G+ Y APE ++G+L
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE-VISGRLY 187
Query: 254 L--KSDVYSFGVVLLEIITGRKAIDN 277
+ D++S GV+L ++ G D+
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 105/234 (44%), Gaps = 49/234 (20%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLV 129
+F +LG+G FG+V K R ++ AIK++ R+ + L EV++L+ L+H +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 130 NLIGYCADGDQRLLV---------------YEYMPLGSLEDHLHDLPPDKKRLDWTTRMR 174
Y A ++R V EY G+L D +H +++R ++ R
Sbjct: 66 RY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY---WR 120
Query: 175 IAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVS-- 232
+ + L Y+H + +I+RDLK NI + E + K+ DFGLAK H S
Sbjct: 121 LFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK------NVHRSLD 171
Query: 233 ----------------TRVMGTYGYCAPEYAM-TGQLTLKSDVYSFGVVLLEII 269
T +GT Y A E TG K D+YS G++ E+I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 20/217 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD--RNGLQGNREFLVEVLMLSLLHHPNLVNLIGY 134
+GEG FG+ + + IK+++ R + E EV +L+ + HPN+V
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHD----LPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
+ +V +Y G L ++ L + + LDW ++ +A L+++HD+
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------LKHVHDRK 145
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTG 250
+++RD+K NI L + +L DFG+A++ + ++ +GT Y +PE
Sbjct: 146 ---ILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYLSPEICENK 200
Query: 251 QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
KSD+++ G VL E+ T + A + A NLV
Sbjct: 201 PYNNKSDIWALGCVLYELCTLKHAFE---AGSMKNLV 234
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 31/278 (11%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQL--DRNGLQGNREFLVEVLMLSLLHHPNLVNLIGY 134
+GEG +G V+K R T Q+VAIK+ + + L E+ ML L HPNLVNL+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 135 CADGDQRLLVYEYMPLGSLEDH--LHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
+ LV+EY DH LH+L ++ + I + + + H K N
Sbjct: 71 FRRKRRLHLVFEYC------DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH-KHN- 122
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM-TGQ 251
I+RD+K NIL+ + KL DFG A+L G + V T Y +PE + Q
Sbjct: 123 -CIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEV-ATRWYRSPELLVGDTQ 179
Query: 252 LTLKSDVYSFGVVLLEIIT------GRKAIDNTRAAGEH--NLVAWARPLFKDRRKFS-- 301
DV++ G V E+++ G+ +D + +L+ + +F + FS
Sbjct: 180 YGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV 239
Query: 302 QMADPT----LQGQYPVRGLYQALAVAAMCVQEQPNMR 335
++ DP L+ ++P Y AL + C+ P R
Sbjct: 240 KIPDPEDMEPLELKFPNIS-YPALGLLKGCLHMDPTER 276
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 34/221 (15%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD---RNGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG+G +G V+K T +VVA+K++ +N R F +++ L H N+VNL+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 134 YC-ADGDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
AD D+ + LV++YM E LH + L+ + + K ++YLH
Sbjct: 77 VLRADNDRDVYLVFDYM-----ETDLHAVIR-ANILEPVHKQYVVYQLIKVIKYLHSGG- 129
Query: 192 PPVIYRDLKCSNILLGEGYHPKLSDFGLAK-------------------LGPVGDKTHVS 232
+++RD+K SNILL H K++DFGL++ D +
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 233 TRVMGTYGYCAPEYAM-TGQLTLKSDVYSFGVVLLEIITGR 272
T + T Y APE + + + T D++S G +L EI+ G+
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 74 DCLLGEGGFGRVYKGRLE----STNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLV 129
D LG G FG V KG + V I + + N E L E ++ L +P +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 130 NLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDK 189
+IG C + + +LV E LG L +L K + + + + G++YL +
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK----NIIELVHQVSMGMKYLEES 130
Query: 190 ANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTY--GYCAPEYA 247
++RDL N+LL ++ K+SDFGL+K D+ + G + + APE
Sbjct: 131 N---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENXYKAQTHGKWPVKWYAPECI 186
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT 270
+ + KSDV+SFGV++ E +
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 33/218 (15%)
Query: 80 GGFGRVYKGRLESTNQVVAIKQL---DRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
G FG V+K +L N VA+K D+ Q RE + + H NL+ I
Sbjct: 26 GRFGCVWKAQL--MNDFVAVKIFPLQDKQSWQSERE----IFSTPGMKHENLLQFIAAEK 79
Query: 137 DGD----QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA-- 190
G + L+ + GSL D+L + W +A ++GL YLH+
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDYL-----KGNIITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 191 ------NPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
P + +RD K N+LL L+DFGLA G + +GT Y AP
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 245 EYAMTGQLT------LKSDVYSFGVVLLEIITGRKAID 276
E + G + L+ D+Y+ G+VL E+++ KA D
Sbjct: 195 E-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+GEG G V R + + + VA+K +D Q EV+++ H N+V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
G++ ++ E++ G+L D + + RL+ + + L YLH + VI+
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQV-----RLNEEQIATVCEAVLQALAYLHAQG---VIH 164
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS 256
RD+K +ILL KLSDFG + ++GT + APE +
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFC--AQISKDVPKRKXLVGTPYWMAPEVISRSLYATEV 222
Query: 257 DVYSFGVVLLEIITG 271
D++S G++++E++ G
Sbjct: 223 DIWSLGIMVIEMVDG 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G FGRV + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EYMP G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + K++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G FGRV + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EYMP G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + K++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + T A+K LD+ + +E L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY P G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+++ + + K++DFGLAK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 77 LGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGNRE-FLVEVLMLSLLHHPNLVNLI 132
+GEG FG V++G E+ VAIK RE FL E L + HP++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G + + ++ E LG L L K LD + + A + L YL K
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHV-STRVMGTYGYCAPEYAMTGQ 251
++RD+ N+L+ KL DFGL++ + D T+ +++ + APE +
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 252 LTLKSDVYSFGVVLLEII 269
T SDV+ FGV + EI+
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 80 GGFGRVYKGRLESTNQVVAIKQL---DRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
G FG V+K +L N+ VA+K D+ Q EV L + H N++ IG
Sbjct: 35 GRFGCVWKAQL--LNEYVAVKIFPIQDKQSWQNE----YEVYSLPGMKHENILQFIGAEK 88
Query: 137 DGDQ----RLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH----- 187
G L+ + GSL D L + W IA A+GL YLH
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDIPG 143
Query: 188 --DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
D P + +RD+K N+LL ++DFGLA G + +GT Y APE
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 246 YAMTGQLT------LKSDVYSFGVVLLEIITGRKAID 276
+ G + L+ D+Y+ G+VL E+ + A D
Sbjct: 204 -VLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR---EFLVEVLMLSLLHHPNLVNLIG 133
LG G FG+V G + T VA+K L+R ++ + E+ L L HP+++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
+ +V EY+ G L D++ R++ R+ ++Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYI----CKHGRVEEMEARRLFQQILSAVDYCHRHM--- 131
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
V++RDLK N+LL + K++DFGL+ + G+ S G+ Y APE ++G+L
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE-VISGRLY 187
Query: 254 L--KSDVYSFGVVLLEIITGRKAIDN 277
+ D++S GV+L ++ G D+
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 15/197 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V G+ + V A+K + + G EF E + L HP LV G C+
Sbjct: 16 LGSGQFGVVKLGKWKGQYDV-AVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
+V EY+ G L L+ L K L+ + + + +G+ +L + I+
Sbjct: 74 KEYPIYIVTEYISNGCL---LNYLRSHGKGLEPSQLLEMCYDVCEGMAFL---ESHQFIH 127
Query: 197 RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT---YGYCAPEYAMTGQLT 253
RDL N L+ K+SDFG+ + V D +VS+ +GT + APE + +
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRY--VLDDQYVSS--VGTKFPVKWSAPEVFHYFKYS 183
Query: 254 LKSDVYSFGVVLLEIIT 270
KSDV++FG+++ E+ +
Sbjct: 184 SKSDVWAFGILMWEVFS 200
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNLVNLIGY 134
+LG G F V + T ++VAIK + + L+G + E+ +L + HPN+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTR--MRIAAGAAKGLEYLHDKANP 192
G L+ + + G L D + ++ +T R R+ ++YLHD
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRI------VEKGFYTERDASRLIFQVLDAVKYLHDLG-- 136
Query: 193 PVIYRDLKCSNIL---LGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMT 249
+++RDLK N+L L E +SDFGL+K+ D V + GT GY APE
Sbjct: 137 -IVHRDLKPENLLYYSLDEDSKIMISDFGLSKME---DPGSVLSTACGTPGYVAPEVLAQ 192
Query: 250 GQLTLKSDVYSFGVVLLEIITG 271
+ D +S GV+ ++ G
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCG 214
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 77 LGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGNRE-FLVEVLMLSLLHHPNLVNLI 132
+GEG FG V++G E+ VAIK RE FL E L + HP++V LI
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G + + ++ E LG L L K LD + + A + L YL K
Sbjct: 106 GVITE-NPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR-- 159
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHV-STRVMGTYGYCAPEYAMTGQ 251
++RD+ N+L+ KL DFGL++ + D T+ +++ + APE +
Sbjct: 160 -FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 216
Query: 252 LTLKSDVYSFGVVLLEII 269
T SDV+ FGV + EI+
Sbjct: 217 FTSASDVWMFGVCMWEIL 234
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 77 LGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGNRE-FLVEVLMLSLLHHPNLVNLI 132
+GEG FG V++G E+ VAIK RE FL E L + HP++V LI
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G + + ++ E LG L L K LD + + A + L YL K
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR-- 128
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHV-STRVMGTYGYCAPEYAMTGQ 251
++RD+ N+L+ KL DFGL++ + D T+ +++ + APE +
Sbjct: 129 -FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 185
Query: 252 LTLKSDVYSFGVVLLEII 269
T SDV+ FGV + EI+
Sbjct: 186 FTSASDVWMFGVCMWEIL 203
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+P G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 77 LGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGNRE-FLVEVLMLSLLHHPNLVNLI 132
+GEG FG V++G E+ VAIK RE FL E L + HP++V LI
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G + + ++ E LG L L K LD + + A + L YL K
Sbjct: 80 GVITE-NPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR-- 133
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHV-STRVMGTYGYCAPEYAMTGQ 251
++RD+ N+L+ KL DFGL++ + D T+ +++ + APE +
Sbjct: 134 -FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 190
Query: 252 LTLKSDVYSFGVVLLEII 269
T SDV+ FGV + EI+
Sbjct: 191 FTSASDVWMFGVCMWEIL 208
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNLVNLIGY 134
+LG G F V + T ++VAIK + + L+G + E+ +L + HPN+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTR--MRIAAGAAKGLEYLHDKANP 192
G L+ + + G L D + ++ +T R R+ ++YLHD
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRI------VEKGFYTERDASRLIFQVLDAVKYLHDLG-- 136
Query: 193 PVIYRDLKCSNIL---LGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMT 249
+++RDLK N+L L E +SDFGL+K+ G V + GT GY APE
Sbjct: 137 -IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQ 192
Query: 250 GQLTLKSDVYSFGVVLLEIITG 271
+ D +S GV+ ++ G
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCG 214
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+P G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 77 LGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGNRE-FLVEVLMLSLLHHPNLVNLI 132
+GEG FG V++G E+ VAIK RE FL E L + HP++V LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G + + ++ E LG L L K LD + + A + L YL K
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTALAYLESKR-- 511
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHV-STRVMGTYGYCAPEYAMTGQ 251
++RD+ N+L+ KL DFGL++ + D T+ +++ + APE +
Sbjct: 512 -FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 568
Query: 252 LTLKSDVYSFGVVLLEII 269
T SDV+ FGV + EI+
Sbjct: 569 FTSASDVWMFGVCMWEIL 586
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 77 LGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGNRE-FLVEVLMLSLLHHPNLVNLI 132
+GEG FG V++G E+ VAIK RE FL E L + HP++V LI
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G + + ++ E LG L L K LD + + A + L YL K
Sbjct: 81 GVITE-NPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR-- 134
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHV-STRVMGTYGYCAPEYAMTGQ 251
++RD+ N+L+ KL DFGL++ + D T+ +++ + APE +
Sbjct: 135 -FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 191
Query: 252 LTLKSDVYSFGVVLLEII 269
T SDV+ FGV + EI+
Sbjct: 192 FTSASDVWMFGVCMWEIL 209
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+P G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 77 LGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGNRE-FLVEVLMLSLLHHPNLVNLI 132
+GEG FG V++G E+ VAIK RE FL E L + HP++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G + + ++ E LG L L K LD + + A + L YL K
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHV-STRVMGTYGYCAPEYAMTGQ 251
++RD+ N+L+ KL DFGL++ + D T+ +++ + APE +
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 252 LTLKSDVYSFGVVLLEII 269
T SDV+ FGV + EI+
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 77 LGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGNRE-FLVEVLMLSLLHHPNLVNLI 132
+GEG FG V++G E+ VAIK RE FL E L + HP++V LI
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G + + ++ E LG L L K LD + + A + L YL K
Sbjct: 83 GVITE-NPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR-- 136
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHV-STRVMGTYGYCAPEYAMTGQ 251
++RD+ N+L+ KL DFGL++ + D T+ +++ + APE +
Sbjct: 137 -FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 193
Query: 252 LTLKSDVYSFGVVLLEII 269
T SDV+ FGV + EI+
Sbjct: 194 FTSASDVWMFGVCMWEIL 211
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNLVNLIGY 134
+LG G F V + T ++VAIK + + L+G + E+ +L + HPN+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTR--MRIAAGAAKGLEYLHDKANP 192
G L+ + + G L D + ++ +T R R+ ++YLHD
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRI------VEKGFYTERDASRLIFQVLDAVKYLHDLG-- 136
Query: 193 PVIYRDLKCSNIL---LGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMT 249
+++RDLK N+L L E +SDFGL+K+ D V + GT GY APE
Sbjct: 137 -IVHRDLKPENLLYYSLDEDSKIMISDFGLSKME---DPGSVLSTACGTPGYVAPEVLAQ 192
Query: 250 GQLTLKSDVYSFGVVLLEIITG 271
+ D +S GV+ ++ G
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCG 214
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+P G + HL + R AA EYLH +
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 162
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 217
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+P G + HL + R AA EYLH +
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 162
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 217
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+P G + HL + R AA EYLH +
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 162
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 217
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQ--GNREFLVEVLMLSLLHHPNLVNLIGY 134
LG G +G V R + T+ AIK + + + N + L EV +L LL HPN++ L +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
D LV E G L D + + + + I G+ YLH K N +
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEI----IHRMKFNEVDAAVIIKQVLSGVTYLH-KHN--I 157
Query: 195 IYRDLKCSNILLGEGYHP---KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
++RDLK N+LL K+ DFGL+ V + +GT Y APE + +
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLS---AVFENQKKMKERLGTAYYIAPE-VLRKK 213
Query: 252 LTLKSDVYSFGVVLLEIITG 271
K DV+S GV+L ++ G
Sbjct: 214 YDEKCDVWSIGVILFILLAG 233
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 77 LGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGNRE-FLVEVLMLSLLHHPNLVNLI 132
+GEG FG V++G E+ VAIK RE FL E L + HP++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G + + ++ E LG L L K LD + + A + L YL K
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHV-STRVMGTYGYCAPEYAMTGQ 251
++RD+ N+L+ KL DFGL++ + D T+ +++ + APE +
Sbjct: 132 -FVHRDIAARNVLVSATDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 252 LTLKSDVYSFGVVLLEII 269
T SDV+ FGV + EI+
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNL 128
+FR +LG G F V + T ++VAIK + + L+G + E+ +L + HPN+
Sbjct: 21 DFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTR--MRIAAGAAKGLEYL 186
V L G L+ + + G L D + ++ +T R R+ ++YL
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRI------VEKGFYTERDASRLIFQVLDAVKYL 132
Query: 187 HDKANPPVIYRDLKCSNIL---LGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCA 243
HD +++RDLK N+L L E +SDFGL+K+ D V + GT GY A
Sbjct: 133 HDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKME---DPGSVLSTACGTPGYVA 186
Query: 244 PEYAMTGQLTLKSDVYSFGVVLLEIITG 271
PE + D +S GV+ ++ G
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 98/212 (46%), Gaps = 19/212 (8%)
Query: 68 TKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV-EVLMLSLLH- 124
T + +G G +G VYK R + VA+K + NG +G V EV +L L
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 125 --HPNLVNLIGYCADG--DQRL---LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA 177
HPN+V L+ CA D+ + LV+E++ L +L PP L T +
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPG--LPAETIKDLMR 119
Query: 178 GAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMG 237
+GL++LH +++RDLK NIL+ G KL+DFGLA+ + V+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALAPVVV 173
Query: 238 TYGYCAPEYAMTGQLTLKSDVYSFGVVLLEII 269
T Y APE + D++S G + E+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 128/293 (43%), Gaps = 37/293 (12%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
+LG+G +G VY GR S +AIK++ + ++ E+ + L H N+V +G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHD----LPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
++ + E +P GSL L L +++ + + T+ + +GL+YLHD
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDNQ- 142
Query: 192 PPVIYRDLKCSNILLGEGYHP--KLSDFGLAK-LGPVGDKTHVSTRVMGTYGYCAPEYAM 248
+++RD+K N+L+ Y K+SDFG +K L + T T GT Y APE
Sbjct: 143 --IVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIID 196
Query: 249 TGQLTL--KSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADP 306
G +D++S G ++E+ TG+ GE + +FK
Sbjct: 197 KGPRGYGKAADIWSLGCTIIEMATGKPPF---YELGEPQAAMFKVGMFK----------- 242
Query: 307 TLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYLACQKYDPESQP 359
+ + P +A A C + P+ R D++ +L ++QP
Sbjct: 243 -VHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD-EFLKVSSKKKKTQP 293
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
+LG G FG+V+K +T +A K + G++ E E+ +++ L H NL+ L
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
+ +LV EY+ G L D + D + LD M+ +G+ ++H ++
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK---QICEGIRHMHQMY---IL 209
Query: 196 YRDLKCSNILL--GEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+ DLK NIL + K+ DFGLA+ +K V+ GT + APE ++
Sbjct: 210 HLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLAPEVVNYDFVS 266
Query: 254 LKSDVYSFGVVLLEIITG 271
+D++S GV+ +++G
Sbjct: 267 FPTDMWSVGVIAYMLLSG 284
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+P G + HL + R AA EYLH +
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 154
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 209
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 210 KAVDWWALGVLIYEMAAG 227
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY P G + HL + R AA EYLH +
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 162
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+++ + + K++DFG AK V +T + GT Y APE ++
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 217
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 14/198 (7%)
Query: 77 LGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGNRE-FLVEVLMLSLLHHPNLVNLI 132
+GEG FG V++G E+ VAIK RE FL E L + HP++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G + + ++ E LG L L K LD + + A + L YL K
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHV-STRVMGTYGYCAPEYAMTGQ 251
++RD+ N+L+ KL DFGL++ + D T +++ + APE +
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTXXKASKGKLPIKWMAPESINFRR 188
Query: 252 LTLKSDVYSFGVVLLEII 269
T SDV+ FGV + EI+
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+P G + HL + R AA EYLH +
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 182
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 237
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 238 KAVDWWALGVLIYEMAAG 255
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + T A+K LD+ + +E L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY P G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+++ + + +++DFGLAK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + T A+K LD+ + ++ L E +L ++ P LV L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+P G + HL + R AA EYLH +
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEYLH---SLD 154
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 209
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 210 KAVDWWALGVLIYEMAAG 227
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 30/225 (13%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNLVNLIGYC 135
LG G + VYKG ++T VA+K++ + +G + E+ ++ L H N+V L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAA------------KGL 183
++ LV+E+M +DL KK +D T G +GL
Sbjct: 73 HTENKLTLVFEFMD--------NDL---KKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 184 EYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCA 243
+ H+ +++RDLK N+L+ + KL DFGLA+ + T S V T Y A
Sbjct: 122 AFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLWYRA 176
Query: 244 PEYAMTGQLTLKS-DVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
P+ M + S D++S G +L E+ITG+ T + L+
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 98/212 (46%), Gaps = 19/212 (8%)
Query: 68 TKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV-EVLMLSLLH- 124
T + +G G +G VYK R + VA+K + NG +G V EV +L L
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 125 --HPNLVNLIGYCADG--DQRL---LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA 177
HPN+V L+ CA D+ + LV+E++ L +L PP L T +
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPG--LPAETIKDLMR 119
Query: 178 GAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMG 237
+GL++LH +++RDLK NIL+ G KL+DFGLA+ + V+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALDPVVV 173
Query: 238 TYGYCAPEYAMTGQLTLKSDVYSFGVVLLEII 269
T Y APE + D++S G + E+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 77 LGEGGFGRVYKGRL---ESTNQVVAIKQLDRNGLQGNRE-FLVEVLMLSLLHHPNLVNLI 132
+GEG FG V++G E+ VAIK RE FL E L + HP++V LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G + + ++ E LG L L K LD + + A + L YL K
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTALAYLESKR-- 511
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHV-STRVMGTYGYCAPEYAMTGQ 251
++RD+ N+L+ KL DFGL++ + D T+ +++ + APE +
Sbjct: 512 -FVHRDIAARNVLVSATDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 568
Query: 252 LTLKSDVYSFGVVLLEII 269
T SDV+ FGV + EI+
Sbjct: 569 FTSASDVWMFGVCMWEIL 586
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 98/212 (46%), Gaps = 19/212 (8%)
Query: 68 TKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD-RNGLQGNREFLV-EVLMLSLLH- 124
T + +G G +G VYK R + VA+K + NG +G V EV +L L
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 125 --HPNLVNLIGYCADG--DQRL---LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA 177
HPN+V L+ CA D+ + LV+E++ L +L PP L T +
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPG--LPAETIKDLMR 119
Query: 178 GAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMG 237
+GL++LH +++RDLK NIL+ G KL+DFGLA+ + V+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALFPVVV 173
Query: 238 TYGYCAPEYAMTGQLTLKSDVYSFGVVLLEII 269
T Y APE + D++S G + E+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G FGRV + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+P G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + K++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR-EFLVEVLMLSLLHHPNLVNLIGYC 135
LGEG + VYKG+ + T+ +VA+K++ +G + EV +L L H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
LV+EY+ L+ +L D ++ +GL Y H + V+
Sbjct: 70 HTEKSLTLVFEYLD-KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQK---VL 122
Query: 196 YRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM-TGQLTL 254
+RDLK N+L+ E KL+DFGLA+ + KT+ + V T Y P+ + + +
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGSTDYST 180
Query: 255 KSDVYSFGVVLLEIITGR 272
+ D++ G + E+ TGR
Sbjct: 181 QIDMWGVGCIFYEMATGR 198
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+P G + HL + R AA EYLH +
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 162
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWT---LCGTPEYLAPEIILSKGYN 217
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 104/234 (44%), Gaps = 49/234 (20%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLV 129
+F +LG+G FG+V K R ++ AIK++ R+ + L EV++L+ L+H +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 130 NLIGYCADGDQRLLV---------------YEYMPLGSLEDHLHDLPPDKKRLDWTTRMR 174
Y A ++R V EY +L D +H +++R ++ R
Sbjct: 66 RY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY---WR 120
Query: 175 IAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVS-- 232
+ + L Y+H + +I+RDLK NI + E + K+ DFGLAK H S
Sbjct: 121 LFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK------NVHRSLD 171
Query: 233 ----------------TRVMGTYGYCAPEYAM-TGQLTLKSDVYSFGVVLLEII 269
T +GT Y A E TG K D+YS G++ E+I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+P G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
+LG+G +G VY GR S +AIK++ + ++ E+ + L H N+V +G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHD----LPPDKKRLDWTTRMRIAAGAAKGLEYLHDKAN 191
++ + E +P GSL L L +++ + + T+ + +GL+YLHD
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDNQ- 128
Query: 192 PPVIYRDLKCSNILLGEGYHP--KLSDFGLAK-LGPVGDKTHVSTRVMGTYGYCAPEYAM 248
+++RD+K N+L+ Y K+SDFG +K L + T T GT Y APE
Sbjct: 129 --IVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIID 182
Query: 249 TGQLTL--KSDVYSFGVVLLEIITGR 272
G +D++S G ++E+ TG+
Sbjct: 183 KGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+P G + HL + R AA EYLH +
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 147
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWT---LCGTPEYLAPEIILSKGYN 202
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 203 KAVDWWALGVLIYEMAAG 220
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 77 LGEGGFGRVYKGR-LESTNQVVAIKQLD-RNGLQGN-----REFLVEVLMLSLLHHPNLV 129
+GEG +G+V+K R L++ + VA+K++ + G +G RE V + L HPN+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV-LRHLETFEHPNVV 77
Query: 130 NLIGYCA----DGDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLE 184
L C D + +L LV+E++ L +L +P + M +GL+
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQL--LRGLD 134
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
+LH V++RDLK NIL+ KL+DFGLA++ T V+ T Y AP
Sbjct: 135 FLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWYRAP 188
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEII 269
E + D++S G + E+
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNRE---FLVEVL 118
R+L +++ ++G G FG V R +ST +V A+K L + + + F E
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 119 MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHL--HDLPPDKKRLDWTTRMRIA 176
+++ + P +V L D +V EYMP G L + + +D+P R +T + +A
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF-YTAEVVLA 180
Query: 177 AGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFG----LAKLGPVGDKTHVS 232
A + ++H RD+K N+LL + H KL+DFG + K G V T V
Sbjct: 181 LDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV- 230
Query: 233 TRVMGTYGYCAPEYAMT----GQLTLKSDVYSFGVVLLEIITG 271
GT Y +PE + G + D +S GV L E++ G
Sbjct: 231 ----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+P G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+P G + HL + R AA EYLH +
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 162
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 217
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 68 TKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-----EVLMLSL 122
T + +G G +G VYK R + VA+K + G L EV +L
Sbjct: 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRR 67
Query: 123 LH---HPNLVNLIGYCADG--DQRL---LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMR 174
L HPN+V L+ CA D+ + LV+E++ L +L PP L T
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPG--LPAETIKD 124
Query: 175 IAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR 234
+ +GL++LH +++RDLK NIL+ G KL+DFGLA+ + T
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALTP 178
Query: 235 VMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEII 269
V+ T Y APE + D++S G + E+
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+P G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY P G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+++ + + K++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 77 LGEGGFGRVYKGR-LESTNQVVAIKQLD-RNGLQGN-----REFLVEVLMLSLLHHPNLV 129
+GEG +G+V+K R L++ + VA+K++ + G +G RE V + L HPN+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV-LRHLETFEHPNVV 77
Query: 130 NLIGYCA----DGDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLE 184
L C D + +L LV+E++ L +L +P + M +GL+
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQL--LRGLD 134
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
+LH V++RDLK NIL+ KL+DFGLA++ T V+ T Y AP
Sbjct: 135 FLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWYRAP 188
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEII 269
E + D++S G + E+
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNRE---FLVEVL 118
R+L +++ ++G G FG V R +ST +V A+K L + + + F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 119 MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHL--HDLPPDKKRLDWTTRMRIA 176
+++ + P +V L D +V EYMP G L + + +D+P R +T + +A
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF-YTAEVVLA 185
Query: 177 AGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFG----LAKLGPVGDKTHVS 232
A + ++H RD+K N+LL + H KL+DFG + K G V T V
Sbjct: 186 LDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV- 235
Query: 233 TRVMGTYGYCAPEYAMT----GQLTLKSDVYSFGVVLLEIITG 271
GT Y +PE + G + D +S GV L E++ G
Sbjct: 236 ----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 77 LGEGGFGRVYKGR-LESTNQVVAIKQLD-RNGLQGN-----REFLVEVLMLSLLHHPNLV 129
+GEG +G+V+K R L++ + VA+K++ + G +G RE V + L HPN+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV-LRHLETFEHPNVV 77
Query: 130 NLIGYCA----DGDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLE 184
L C D + +L LV+E++ L +L +P + M +GL+
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQL--LRGLD 134
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
+LH V++RDLK NIL+ KL+DFGLA++ T V+ T Y AP
Sbjct: 135 FLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWYRAP 188
Query: 245 EYAMTGQLTLKSDVYSFGVVLLEII 269
E + D++S G + E+
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNRE---FLVEVL 118
R+L +++ ++G G FG V R +ST +V A+K L + + + F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 119 MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHL--HDLPPDKKRLDWTTRMRIA 176
+++ + P +V L D +V EYMP G L + + +D+P R +T + +A
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF-YTAEVVLA 185
Query: 177 AGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFG----LAKLGPVGDKTHVS 232
A + ++H RD+K N+LL + H KL+DFG + K G V T V
Sbjct: 186 LDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV- 235
Query: 233 TRVMGTYGYCAPEYAMT----GQLTLKSDVYSFGVVLLEIITG 271
GT Y +PE + G + D +S GV L E++ G
Sbjct: 236 ----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGL---QGNREFLVEVLMLSLLHHPNLVNLI 132
LG+GGF + Y+ T +V A K + ++ L + E+ + L +P++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G+ D D +V E SL + LH +K + +G++YLH N
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLE-LHK---RRKAVTEPEARYFMRQTIQGVQYLH---NN 161
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RDLK N+ L + K+ DFGLA K+ G++ + GT Y APE
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT---LCGTPNYIAPEVLCKKG 218
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDNT 278
+ + D++S G +L ++ G+ + +
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 104/216 (48%), Gaps = 32/216 (14%)
Query: 70 NFRADCLLGEGGFGRVYKGRLES---TNQVVAIKQL--------DRNGLQGNREFLVEVL 118
+F +LG+G FG+V+ R + + + A+K L DR + R+ L +V
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV- 87
Query: 119 MLSLLHHPNLVNLIGYCADGDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTR--MRI 175
+HP +V L Y + +L L+ +++ G L L K + +T
Sbjct: 88 -----NHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFY 135
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A A GL++LH +IYRDLK NILL E H KL+DFGL+K +K S
Sbjct: 136 LAELALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--F 190
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
GT Y APE + +D +S+GV++ E++TG
Sbjct: 191 CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+P G + HL + R AA EYLH +
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEYLH---SLD 162
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 217
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGL---QGNREFLVEVLMLSLLHHPNLVNLI 132
LG+GGF + Y+ T +V A K + ++ L + E+ + L +P++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G+ D D +V E SL + LH +K + +G++YLH N
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLE-LHK---RRKAVTEPEARYFMRQTIQGVQYLH---NN 161
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RDLK N+ L + K+ DFGLA K+ G++ + GT Y APE
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPNYIAPEVLCKKG 218
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDNT 278
+ + D++S G +L ++ G+ + +
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+P G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY P G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+++ + + K++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+P G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGL---QGNREFLVEVLMLSLLHHPNLVNLI 132
LG+GGF + Y+ T +V A K + ++ L + E+ + L +P++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G+ D D +V E SL + LH +K + +G++YLH N
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLE-LHK---RRKAVTEPEARYFMRQTIQGVQYLH---NN 161
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RDLK N+ L + K+ DFGLA K+ G++ + GT Y APE
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIAPEVLCKKG 218
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDNT 278
+ + D++S G +L ++ G+ + +
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + T A+K LD+ L+ L E + ++ P LV L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEF 109
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY P G + HL + R AA EYLH +
Sbjct: 110 SFKDNSNLYMVLEYAPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 162
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + K++DFG AK V +T + GT Y APE ++
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 217
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 90/199 (45%), Gaps = 11/199 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFL-VEVLMLSLLHHPNLVNLIGYC 135
LG G FG V+ S+ IK ++++ Q E + E+ +L L HPN++ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
D +V E G L + + K L + L Y H + V+
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VV 146
Query: 196 YRDLKCSNILLGEG--YHP-KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQL 252
++DLK NIL + + P K+ DFGLA+L + ST GT Y APE +
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAPE-VFKRDV 202
Query: 253 TLKSDVYSFGVVLLEIITG 271
T K D++S GVV+ ++TG
Sbjct: 203 TFKCDIWSAGVVMYFLLTG 221
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 37/223 (16%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G+G +G V++G + N V I R+ RE E+ +L H N++ I
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFS-SRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 137 ----DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH----- 187
Q L+ Y +GSL D+L LD + +RI A GL +LH
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGP-------VGDKTHVSTRVMGTYG 240
+ P + +RDLK NIL+ + ++D GLA + VG+ V GT
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-----GTKR 182
Query: 241 YCAPEYA-MTGQLTL-----KSDVYSFGVVLLEIITGRKAIDN 277
Y APE T Q+ + D+++FG+VL E+ R+ + N
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSN 223
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 37/223 (16%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G+G +G V++G + N V I R+ RE E+ +L H N++ I
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFS-SRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 137 ----DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH----- 187
Q L+ Y +GSL D+L LD + +RI A GL +LH
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGP-------VGDKTHVSTRVMGTYG 240
+ P + +RDLK NIL+ + ++D GLA + VG+ V GT
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-----GTKR 182
Query: 241 YCAPEYA-MTGQLTL-----KSDVYSFGVVLLEIITGRKAIDN 277
Y APE T Q+ + D+++FG+VL E+ R+ + N
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSN 223
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGL---QGNREFLVEVLMLSLLHHPNLVNLI 132
LG+GGF + Y+ T +V A K + ++ L + E+ + L +P++V
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G+ D D +V E SL + LH +K + +G++YLH N
Sbjct: 93 GFFEDDDFVYVVLEICRRRSLLE-LHK---RRKAVTEPEARYFMRQTIQGVQYLH---NN 145
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RDLK N+ L + K+ DFGLA K+ G++ + GT Y APE
Sbjct: 146 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIAPEVLCKKG 202
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDNT 278
+ + D++S G +L ++ G+ + +
Sbjct: 203 HSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 37/223 (16%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G+G +G V++G + N V I R+ RE E+ +L H N++ I
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFS-SRDEKSWFRE--TELYNTVMLRHENILGFIASDM 101
Query: 137 ----DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH----- 187
Q L+ Y +GSL D+L LD + +RI A GL +LH
Sbjct: 102 TSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFG 156
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGP-------VGDKTHVSTRVMGTYG 240
+ P + +RDLK NIL+ + ++D GLA + VG+ V GT
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-----GTKR 211
Query: 241 YCAPEYA-MTGQLTL-----KSDVYSFGVVLLEIITGRKAIDN 277
Y APE T Q+ + D+++FG+VL E+ R+ + N
Sbjct: 212 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSN 252
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY P G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+++ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 21/222 (9%)
Query: 60 TFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EF 113
TFR+ V ++ LG G F V K R + T + A K + + L +R E
Sbjct: 4 TFRQ-EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEI 62
Query: 114 LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRM 173
EV +L + HPN++ L + +L+ E + G L D L +K+ L
Sbjct: 63 EREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL----AEKESLTEDEAT 118
Query: 174 RIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHP----KLSDFGLAKLGPVGDKT 229
+ G+ YLH K + + DLK NI+L + P KL DFG+A G++
Sbjct: 119 QFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 175
Query: 230 HVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
+ GT + APE L L++D++S GV+ +++G
Sbjct: 176 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNL 128
+F LG G G V K + + ++A K + R ++ E+ +L + P +
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 76
Query: 129 VNLIG-YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
V G + +DG+ + + E+M GSL+ L + KR+ +++ +GL YL
Sbjct: 77 VGFYGAFYSDGEISICM-EHMDGGSLDQVLKE----AKRIPEEILGKVSIAVLRGLAYLR 131
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYA 247
+K +++RD+K SNIL+ KL DFG++ G + D ++ +GT Y APE
Sbjct: 132 EKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMAPERL 185
Query: 248 MTGQLTLKSDVYSFGVVLLEIITGRKAI 275
+++SD++S G+ L+E+ GR I
Sbjct: 186 QGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + T A+K LD+ L+ L E +L ++ P L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY P G + HL + R AA EYLH +
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 162
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+++ + + K++DFG AK V +T + GT Y APE ++
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 217
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + T A+K LD+ L+ L E +L ++ P L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY P G + HL + R AA EYLH +
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 162
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+++ + + K++DFG AK V +T + GT Y APE ++
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 217
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNL 128
+F LG G G V+K + + V+A K + R ++ E+ +L + P +
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 129 VNLIG-YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
V G + +DG+ + + E+M GSL+ L R+ +++ KGL YL
Sbjct: 129 VGFYGAFYSDGEISICM-EHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLR 183
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYA 247
+K +++RD+K SNIL+ KL DFG++ G + D ++ +GT Y +PE
Sbjct: 184 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERL 237
Query: 248 MTGQLTLKSDVYSFGVVLLEIITGRKAI 275
+++SD++S G+ L+E+ GR I
Sbjct: 238 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + T A+K LD+ L+ L E +L ++ P L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY P G + HL + R AA EYLH +
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEYLH---SLD 162
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+++ + + K++DFG AK V +T + GT Y APE ++
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 217
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + + A+K LD+ + ++ L E +L ++ P LV L
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 95
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 96 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 148
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ E + +++DFG AK V +T + GT Y APE ++
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 203
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 204 KAVDWWALGVLIYEMAAG 221
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNL 128
+F LG G G V+K + + V+A K + R ++ E+ +L + P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 129 VNLIG-YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
V G + +DG+ + + E+M GSL+ L R+ +++ KGL YL
Sbjct: 67 VGFYGAFYSDGEISICM-EHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLR 121
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYA 247
+K +++RD+K SNIL+ KL DFG++ G + D ++ +GT Y +PE
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERL 175
Query: 248 MTGQLTLKSDVYSFGVVLLEIITGRKAI 275
+++SD++S G+ L+E+ GR I
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R + T + A K + + L +R E EV +L + HPN++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L +K+ L + G+ YLH K
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFL----AEKESLTEDEATQFLKQILDGVHYLHSKR 128
Query: 191 NPPVIYRDLKCSNILLGEGYHP----KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + DLK NI+L + P KL DFG+A G++ + GT + APE
Sbjct: 129 ---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEI 182
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
L L++D++S GV+ +++G
Sbjct: 183 VNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGL---QGNREFLVEVLMLSLLHHPNLVNLI 132
LG+GGF + ++ T +V A K + ++ L + +E+ + L H ++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G+ D D +V E SL + LH +K L G +YLH
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLE-LHK---RRKALTEPEARYYLRQIVLGCQYLHRNR-- 159
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RDLK N+ L E K+ DFGLA K+ G++ V + GT Y APE
Sbjct: 160 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 215
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDNT 278
+ + DV+S G ++ ++ G+ + +
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGL---QGNREFLVEVLMLSLLHHPNLVNLI 132
LG+GGF + ++ T +V A K + ++ L + +E+ + L H ++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G+ D D +V E SL + LH +K L G +YLH
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLE-LHK---RRKALTEPEARYYLRQIVLGCQYLHRNR-- 161
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RDLK N+ L E K+ DFGLA K+ G++ V + GT Y APE
Sbjct: 162 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 217
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDNT 278
+ + DV+S G ++ ++ G+ + +
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + + A+K LD+ + ++ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLXGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + + A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLAGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNL 128
+F LG G G V+K + + V+A K + R ++ E+ +L + P +
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 93
Query: 129 VNLIG-YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
V G + +DG+ + + E+M GSL+ L R+ +++ KGL YL
Sbjct: 94 VGFYGAFYSDGEISICM-EHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLR 148
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYA 247
+K +++RD+K SNIL+ KL DFG++ G + D ++ +GT Y +PE
Sbjct: 149 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERL 202
Query: 248 MTGQLTLKSDVYSFGVVLLEIITGRKAI 275
+++SD++S G+ L+E+ GR I
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNL 128
+F LG G G V+K + + V+A K + R ++ E+ +L + P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 129 VNLIG-YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
V G + +DG+ + + E+M GSL+ L R+ +++ KGL YL
Sbjct: 67 VGFYGAFYSDGEISICM-EHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLR 121
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYA 247
+K +++RD+K SNIL+ KL DFG++ G + D ++ +GT Y +PE
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERL 175
Query: 248 MTGQLTLKSDVYSFGVVLLEIITGRKAI 275
+++SD++S G+ L+E+ GR I
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + + A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNL 128
+F LG G G V+K + + V+A K + R ++ E+ +L + P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 129 VNLIG-YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
V G + +DG+ + + E+M GSL+ L R+ +++ KGL YL
Sbjct: 67 VGFYGAFYSDGEISICM-EHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLR 121
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYA 247
+K +++RD+K SNIL+ KL DFG++ G + D ++ +GT Y +PE
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERL 175
Query: 248 MTGQLTLKSDVYSFGVVLLEIITGRKAI 275
+++SD++S G+ L+E+ GR I
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 26/222 (11%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNRE---FLVEVL 118
R L +++ ++G G FG V R +++ +V A+K L + + + F E
Sbjct: 68 RGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERD 127
Query: 119 MLSLLHHPNLVNLIGYCADGDQRLL--VYEYMPLGSLEDHL--HDLPPDKKRLDWTTRMR 174
+++ + P +V L +CA D + L V EYMP G L + + +D+P + +T +
Sbjct: 128 IMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKF-YTAEVV 184
Query: 175 IAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVST 233
+A A + +H RD+K N+LL + H KL+DFG K+ G H T
Sbjct: 185 LALDAIHSMGLIH---------RDVKPDNMLLDKHGHLKLADFGTCMKMDETG-MVHCDT 234
Query: 234 RVMGTYGYCAPEYAMT----GQLTLKSDVYSFGVVLLEIITG 271
V GT Y +PE + G + D +S GV L E++ G
Sbjct: 235 AV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + T A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R + T + A K + + L +R E EV +L + HPN++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L +K+ L + G+ YLH K
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFL----AEKESLTEDEATQFLKQILDGVHYLHSKR 149
Query: 191 NPPVIYRDLKCSNILLGEGYHP----KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + DLK NI+L + P KL DFG+A G++ + GT + APE
Sbjct: 150 ---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEI 203
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
L L++D++S GV+ +++G
Sbjct: 204 VNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + + A+K LD+ L+ L E +L ++ P LV L
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 110 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 162
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 217
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 218 KAVDWWALGVLIYEMAAG 235
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + + A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 13/205 (6%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNL 128
+F LG G G V+K + + V+A K + R ++ E+ +L + P +
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 129 VNLIG-YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
V G + +DG+ + + E+M GSL+ L R+ +++ KGL YL
Sbjct: 70 VGFYGAFYSDGEISICM-EHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLR 124
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYA 247
+K +++RD+K SNIL+ KL DFG++ G + D+ ++ +GT Y +PE
Sbjct: 125 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE--MANEFVGTRSYMSPERL 178
Query: 248 MTGQLTLKSDVYSFGVVLLEIITGR 272
+++SD++S G+ L+E+ GR
Sbjct: 179 QGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + + A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + + A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGL---QGNREFLVEVLMLSLLHHPNLVNLI 132
LG+GGF + ++ T +V A K + ++ L + +E+ + L H ++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G+ D D +V E SL + LH +K L G +YLH
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLE-LHK---RRKALTEPEARYYLRQIVLGCQYLHRNR-- 135
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RDLK N+ L E K+ DFGLA K+ G++ V + GT Y APE
Sbjct: 136 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 191
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDNT 278
+ + DV+S G ++ ++ G+ + +
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + + A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 49/234 (20%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLV 129
+F +LG+G FG+V K R ++ AIK++ R+ + L EV +L+ L+H +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVV 65
Query: 130 NLIGYCADGDQRLLV---------------YEYMPLGSLEDHLHDLPPDKKRLDWTTRMR 174
Y A ++R V EY +L D +H +++R ++ R
Sbjct: 66 RY--YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY---WR 120
Query: 175 IAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVS-- 232
+ + L Y+H + +I+R+LK NI + E + K+ DFGLAK H S
Sbjct: 121 LFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAK------NVHRSLD 171
Query: 233 ----------------TRVMGTYGYCAPEYAM-TGQLTLKSDVYSFGVVLLEII 269
T +GT Y A E TG K D YS G++ E I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + + A+K LD+ L+ L E +L ++ P LV L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 182
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVM-GTYGYCAPEYAMTGQL 252
+IYRDLK N+L+ + + +++DFG AK + +T + GT Y APE ++
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGATWTLCGTPEYLAPEIILSKGY 236
Query: 253 TLKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 237 NKAVDWWALGVLIYEMAAG 255
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + + A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + + A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + + A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + + A+K LD+ + ++ L E +L ++ P LV L
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 103
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 104 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEYLH---SLD 156
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 211
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 212 KAVDWWALGVLIYEMAAG 229
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNL 128
+F LG G G V+K + + V+A K + R ++ E+ +L + P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 129 VNLIG-YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
V G + +DG+ + + E+M GSL+ L R+ +++ KGL YL
Sbjct: 67 VGFYGAFYSDGEISICM-EHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLR 121
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYA 247
+K +++RD+K SNIL+ KL DFG++ G + D ++ +GT Y +PE
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERL 175
Query: 248 MTGQLTLKSDVYSFGVVLLEIITGRKAI 275
+++SD++S G+ L+E+ GR I
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNL 128
+F LG G G V+K + + V+A K + R ++ E+ +L + P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 129 VNLIG-YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
V G + +DG+ + + E+M GSL+ L R+ +++ KGL YL
Sbjct: 67 VGFYGAFYSDGEISICM-EHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLR 121
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYA 247
+K +++RD+K SNIL+ KL DFG++ G + D ++ +GT Y +PE
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERL 175
Query: 248 MTGQLTLKSDVYSFGVVLLEIITGRKAI 275
+++SD++S G+ L+E+ GR I
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 29/227 (12%)
Query: 77 LGEGGFGRV------YKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVN 130
LGEGGF V + G + +++ +Q DR Q E M L +HPN++
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQR------EADMHRLFNHPNILR 90
Query: 131 LIGYC----ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYL 186
L+ YC + L+ + G+L + + L L + + G +GLE +
Sbjct: 91 LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 187 HDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPV---GDKTHVSTRVMG----TY 239
H K +RDLK +NILLG+ P L D G + G + ++ + T
Sbjct: 151 HAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 240 GYCAPE-YAMTGQLTL--KSDVYSFGVVLLEIITGRKAIDNTRAAGE 283
Y APE +++ + ++DV+S G VL ++ G D G+
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 254
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 71 FRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEV-LMLSLLHHPNLV 129
R +L EGGF VY+ + + + A+K+L N + NR + EV M L HPN+V
Sbjct: 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIV 89
Query: 130 NLIGYCADGDQR-------LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKG 182
+ G + L+ + G L + L + + L T ++I +
Sbjct: 90 QFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKME-SRGPLSCDTVLKIFYQTCRA 148
Query: 183 LEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLA 220
++++H + PP+I+RDLK N+LL KL DFG A
Sbjct: 149 VQHMH-RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + + A+K LD+ L+ L E +L ++ P LV L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEYLH---SLD 182
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 237
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 238 KAVDWWALGVLIYEMAAG 255
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 88/200 (44%), Gaps = 16/200 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLH-HPNLVNLIGYC 135
LGEG F K + +NQ A+K + + ++ N + E+ L L HPN+V L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKR-MEANTQ--KEITALKLCEGHPNIVKLHEVF 75
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
D LV E + G L + + KK T I + ++HD V+
Sbjct: 76 HDQLHTFLVMELLNGGELFERI----KKKKHFSETEASYIMRKLVSAVSHMHDVG---VV 128
Query: 196 YRDLKCSNILL---GEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQL 252
+RDLK N+L + K+ DFG A+L P D + T T Y APE
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKP-PDNQPLKTPCF-TLHYAAPELLNQNGY 186
Query: 253 TLKSDVYSFGVVLLEIITGR 272
D++S GV+L +++G+
Sbjct: 187 DESCDLWSLGVILYTMLSGQ 206
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + + A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFAEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V++ +T A K + E+ +S+L HP LVNL
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
D ++ +++YE+M G L + + D + ++ + KGL ++H+ ++
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVH 278
Query: 197 RDLKCSNILL--GEGYHPKLSDFGL-AKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
DLK NI+ KL DFGL A L P V+T GT + APE A +
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDP-KQSVKVTT---GTAEFAAPEVAEGKPVG 334
Query: 254 LKSDVYSFGVVLLEIITG 271
+D++S GV+ +++G
Sbjct: 335 YYTDMWSVGVLSYILLSG 352
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V++ +T A K + E+ +S+L HP LVNL
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
D ++ +++YE+M G L + + D + ++ + KGL ++H+ ++
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVH 172
Query: 197 RDLKCSNILL--GEGYHPKLSDFGL-AKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
DLK NI+ KL DFGL A L P V+T GT + APE A +
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDP-KQSVKVTT---GTAEFAAPEVAEGKPVG 228
Query: 254 LKSDVYSFGVVLLEIITG 271
+D++S GV+ +++G
Sbjct: 229 YYTDMWSVGVLSYILLSG 246
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 38/284 (13%)
Query: 77 LGEGGFGRVYKG---------RLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPN 127
LG+G F +++KG +L T V +K LD+ + F M+S L H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETE--VLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
LV G C GD+ +LV E++ GSL+ +L +K ++ ++ +A A + +L
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYLKK---NKNCINILWKLEVAKQLAAAMHFLE 130
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR--VMGTYGYCAPE 245
+ +I+ ++ NILL K + KL G V + + + PE
Sbjct: 131 ENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPE 187
Query: 246 YAMTGQ-LTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMA 304
+ L L +D +SFG L EI +G G+ L A +RK
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSG----------GDKPLSA-----LDSQRKLQFYE 232
Query: 305 DPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYL 348
D + Q P + + C+ +P+ RP ++ L L
Sbjct: 233 D---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + + A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+++ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLIIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIIISKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGL---QGNREFLVEVLMLSLLHHPNLVNLI 132
LG+GGF + ++ T +V A K + ++ L + +E+ + L H ++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G+ D D +V E SL + LH +K L G +YLH
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLE-LHK---RRKALTEPEARYYLRQIVLGCQYLHRNR-- 141
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RDLK N+ L E K+ DFGLA K+ G++ + GT Y APE
Sbjct: 142 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVLSKKG 197
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDNT 278
+ + DV+S G ++ ++ G+ + +
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + + A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ ++ G
Sbjct: 217 KAVDWWALGVLIYQMAAG 234
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGL---QGNREFLVEVLMLSLLHHPNLVNLI 132
LG+GGF + ++ T +V A K + ++ L + +E+ + L H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G+ D D +V E SL + LH +K L G +YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHK---RRKALTEPEARYYLRQIVLGCQYLHRNR-- 137
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RDLK N+ L E K+ DFGLA K+ G++ + GT Y APE
Sbjct: 138 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVLSKKG 193
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDNT 278
+ + DV+S G ++ ++ G+ + +
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHHPNL 128
+F LG G G V+K + + V+A K + R ++ E+ +L + P +
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 85
Query: 129 VNLIG-YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
V G + +DG+ + + E+M GSL+ L R+ +++ KGL YL
Sbjct: 86 VGFYGAFYSDGEISICM-EHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLR 140
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYA 247
+K +++RD+K SNIL+ KL DFG++ G + D ++ +GT Y +PE
Sbjct: 141 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERL 194
Query: 248 MTGQLTLKSDVYSFGVVLLEIITGRKAI 275
+++SD++S G+ L+E+ GR I
Sbjct: 195 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGL---QGNREFLVEVLMLSLLHHPNLVNLI 132
LG+GGF + ++ T +V A K + ++ L + +E+ + L H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
G+ D D +V E SL + LH +K L G +YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHK---RRKALTEPEARYYLRQIVLGCQYLHRNR-- 137
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
VI+RDLK N+ L E K+ DFGLA K+ G++ + GT Y APE
Sbjct: 138 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVLSKKG 193
Query: 252 LTLKSDVYSFGVVLLEIITGRKAIDNT 278
+ + DV+S G ++ ++ G+ + +
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 31/212 (14%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQL-DRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
+G+G +G V+ G+ + VA+K RE E+ L+ H N++ I
Sbjct: 45 IGKGRYGEVWMGKWR--GEKVAVKVFFTTEEASWFRE--TEIYQTVLMRHENILGFIAAD 100
Query: 136 ADGD----QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD--- 188
G Q L+ +Y GSL D+L D K + +++A + GL +LH
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM-----LKLAYSSVSGLCHLHTEIF 155
Query: 189 --KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHV----STRVMGTYGYC 242
+ P + +RDLK NIL+ + ++D GLA + + D V +TRV GT Y
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VKFISDTNEVDIPPNTRV-GTKRYM 213
Query: 243 APEYAMTG------QLTLKSDVYSFGVVLLEI 268
PE Q + +D+YSFG++L E+
Sbjct: 214 PPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 16/215 (7%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQV---VAIKQLDRNGLQGN--REFLVEVLMLSLL 123
+ F +LG+G FG V + +L+ + VA+K L + + + EFL E +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 124 HHPNLVNLIGYCADGDQR------LLVYEYMPLGSLEDHL--HDLPPDKKRLDWTTRMRI 175
HP++ L+G + +++ +M G L L + + L T +R
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 176 AAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
A G+EYL + I+RDL N +L E ++DFGL++ GD
Sbjct: 143 MVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCAS 199
Query: 236 MGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT 270
+ A E T+ SDV++FGV + EI+T
Sbjct: 200 KLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 38/284 (13%)
Query: 77 LGEGGFGRVYKG---------RLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPN 127
LG+G F +++KG +L T V +K LD+ + F M+S L H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETE--VLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 128 LVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
LV G C GD+ +LV E++ GSL+ +L +K ++ ++ +A A + +L
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYLKK---NKNCINILWKLEVAKQLAWAMHFLE 130
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTR--VMGTYGYCAPE 245
+ +I+ ++ NILL K + KL G V + + + PE
Sbjct: 131 ENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPE 187
Query: 246 YAMTGQ-LTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMA 304
+ L L +D +SFG L EI +G G+ L A +RK
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSG----------GDKPLSA-----LDSQRKLQFYE 232
Query: 305 DPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYL 348
D + Q P + + C+ +P+ RP ++ L L
Sbjct: 233 D---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 29/219 (13%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G+G +G V++G + V I R+ RE E+ LL H N++ I
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFS-SRDEQSWFRE--TEIYNTVLLRHDNILGFIASDM 72
Query: 137 ----DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH----- 187
Q L+ Y GSL D L ++ L+ +R+A AA GL +LH
Sbjct: 73 TSRNSSTQLWLITHYHEHGSLYDFLQ-----RQTLEPHLALRLAVSAACGLAHLHVEIFG 127
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVG-DKTHVSTR-VMGTYGYCAPE 245
+ P + +RD K N+L+ ++D GLA + G D + +GT Y APE
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE 187
Query: 246 YAMTGQLTLK-------SDVYSFGVVLLEIITGRKAIDN 277
+ Q+ +D+++FG+VL EI R+ I N
Sbjct: 188 -VLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTIVN 223
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 67 VTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV-EVLMLSLLHH 125
+ K F LG G F V ++T ++ A+K + + L+G + E+ +L + H
Sbjct: 20 IKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKH 79
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
N+V L + LV + + G L D + + ++ D +T +R A + Y
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEK-DASTLIRQVLDA---VYY 135
Query: 186 LHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYC 242
LH +++RDLK N+L E +SDFGL+K+ GD V + GT GY
Sbjct: 136 LHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGTPGYV 189
Query: 243 APEYAMTGQLTLKSDVYSFGVVLLEIITG 271
APE + D +S GV+ ++ G
Sbjct: 190 APEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNG---LQGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + + A+K LD+ L+ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT Y AP ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEYLAPAIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R +ST A K + + + +R E EV +L + HPN++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L K+ L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 191 NPPVIYRDLKCSNILLGEGY----HPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + DLK NI+L + H KL DFGLA + D + GT + APE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEI 189
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
L L++D++S GV+ +++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 19/194 (9%)
Query: 116 EVLMLSLLHHPNLVNLIGYCAD--GDQRLLVYEYMPLGSLED--HLHDLPPDKKRLDWTT 171
E+ +L L HPN+V L+ D D +V+E + G + + L L D+ R +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQD 145
Query: 172 RMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHV 231
+ KG+EYLH + +I+RD+K SN+L+GE H K++DFG++ D
Sbjct: 146 LI-------KGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLS 195
Query: 232 STRVMGTYGYCAPEYAMTGQLTLKS---DVYSFGVVLLEIITGRKAIDNTRAAGEHNLVA 288
+T +GT + APE + DV++ GV L + G+ + R H+ +
Sbjct: 196 NT--VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIK 253
Query: 289 WARPLFKDRRKFSQ 302
F D+ ++
Sbjct: 254 SQALEFPDQPDIAE 267
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R +ST A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L +K+ L G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 191 NPPVIYRDLKCSNILLGEGYHPK----LSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + + DLK NI+L + PK + DFGLA G++ + GT + APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPAFVAPEI 188
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
L L++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 31/212 (14%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G+G FG V++G+ V I R RE E+ +L H N++ I A
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFS-SREERSWFRE--AEIYQTVMLRHENILGFIA--A 65
Query: 137 DGD------QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH--- 187
D Q LV +Y GSL D+L+ + + +++A A GL +LH
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 120
Query: 188 --DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVS-TRVMGTYGYCA 243
+ P + +RDLK NIL+ + ++D GLA + D ++ +GT Y A
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 244 PEYAMTGQLTLK-------SDVYSFGVVLLEI 268
PE + + +K +D+Y+ G+V EI
Sbjct: 181 PE-VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 31/212 (14%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G+G FG V++G+ V I R RE E+ +L H N++ I A
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFS-SREERSWFRE--AEIYQTVMLRHENILGFIA--A 66
Query: 137 DGD------QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH--- 187
D Q LV +Y GSL D+L+ + + +++A A GL +LH
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 121
Query: 188 --DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVS-TRVMGTYGYCA 243
+ P + +RDLK NIL+ + ++D GLA + D ++ +GT Y A
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 181
Query: 244 PEYAMTGQLTLK-------SDVYSFGVVLLEI 268
PE + + +K +D+Y+ G+V EI
Sbjct: 182 PE-VLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 31/212 (14%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G+G FG V++G+ V I R RE E+ +L H N++ I A
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIFS-SREERSWFRE--AEIYQTVMLRHENILGFIA--A 71
Query: 137 DGD------QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH--- 187
D Q LV +Y GSL D+L+ + + +++A A GL +LH
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 126
Query: 188 --DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVS-TRVMGTYGYCA 243
+ P + +RDLK NIL+ + ++D GLA + D ++ +GT Y A
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 186
Query: 244 PEYAMTGQLTLK-------SDVYSFGVVLLEI 268
PE + + +K +D+Y+ G+V EI
Sbjct: 187 PE-VLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR--NGLQGNREFLVEVLMLSLLHHPNLVN---- 130
+G G +G V R T Q VAIK++ + + + L E+ +L H N++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L G+ + + Y+ L +E LH + + L +GL+Y+H
Sbjct: 123 LRPTVPYGEFKSV---YVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ 179
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAK--LGPVGDKTHVSTRVMGTYGYCAPEYAM 248
VI+RDLK SN+L+ E K+ DFG+A+ + + T + T Y APE +
Sbjct: 180 ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 236
Query: 249 T-GQLTLKSDVYSFGVVLLEIITGRK 273
+ + T D++S G + E++ R+
Sbjct: 237 SLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 31/212 (14%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G+G FG V++G+ V I R RE E+ +L H N++ I A
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIFS-SREERSWFRE--AEIYQTVMLRHENILGFIA--A 68
Query: 137 DGD------QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH--- 187
D Q LV +Y GSL D+L+ + + +++A A GL +LH
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 123
Query: 188 --DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVS-TRVMGTYGYCA 243
+ P + +RDLK NIL+ + ++D GLA + D ++ +GT Y A
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 183
Query: 244 PEYAMTGQLTLK-------SDVYSFGVVLLEI 268
PE + + +K +D+Y+ G+V EI
Sbjct: 184 PE-VLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 107/247 (43%), Gaps = 38/247 (15%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGY 134
+GEG +G V+K + T+++VA+K+ LD + L E+ +L L H N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+ LV+E+ L+ + D LD KGL + H + V
Sbjct: 70 LHSDKKLTLVFEFCD-QDLKKYFDSCNGD---LDPEIVKSFLFQLLKGLGFCHSRN---V 122
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTL 254
++RDLK N+L+ KL+DFGLA+ + + + + V T Y P+ +L
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYRPPDVLFGAKLYS 180
Query: 255 KS-DVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLF-------KDRRKFSQMADP 306
S D++S G + E+ ARPLF + +R F + P
Sbjct: 181 TSIDMWSAGCIFAELANA------------------ARPLFPGNDVDDQLKRIFRLLGTP 222
Query: 307 TLQGQYP 313
T + Q+P
Sbjct: 223 T-EEQWP 228
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 31/212 (14%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G+G FG V++G+ V I R RE E+ +L H N++ I A
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIFS-SREERSWFRE--AEIYQTVMLRHENILGFIA--A 91
Query: 137 DGD------QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH--- 187
D Q LV +Y GSL D+L+ + + +++A A GL +LH
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 146
Query: 188 --DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVS-TRVMGTYGYCA 243
+ P + +RDLK NIL+ + ++D GLA + D ++ +GT Y A
Sbjct: 147 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 206
Query: 244 PEYAMTGQLTLK-------SDVYSFGVVLLEI 268
PE + + +K +D+Y+ G+V EI
Sbjct: 207 PE-VLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 18/213 (8%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLES---TNQVVAIKQLDRNGL----QGNREFLVEVLMLS 121
+NF +LG G +G+V+ R S T ++ A+K L + + + E +L
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 122 LLHHPNLVNLIGYCADGDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAA 180
+ + + Y + +L L+ +Y+ G L HL ++R
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL----SQRERFTEHEVQIYVGEIV 169
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
LE+LH +IYRD+K NILL H L+DFGL+K V D+T + GT
Sbjct: 170 LALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK-EFVADETERAYDFCGTIE 225
Query: 241 YCAPEYAMTGQLTLKS--DVYSFGVVLLEIITG 271
Y AP+ G D +S GV++ E++TG
Sbjct: 226 YMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF---LVEVLMLSLLHHPNLVNLIG 133
LG G FGRV + + + A+K LD+ + ++ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D +V EY+ G + HL + R AA EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLD 161
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
+IYRDLK N+L+ + + +++DFG AK V +T + GT APE ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRT---WXLCGTPEALAPEIILSKGYN 216
Query: 254 LKSDVYSFGVVLLEIITG 271
D ++ GV++ E+ G
Sbjct: 217 KAVDWWALGVLIYEMAAG 234
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR--NGLQGNREFLVEVLMLSLLHHPNLVNLIGY 134
+G G +G V R T Q VAIK++ + + + L E+ +L H N++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 135 CAD----GDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
G+ + + Y+ L +E LH + + L +GL+Y+H
Sbjct: 122 LRPTVPYGEFKSV---YVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ 178
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAK--LGPVGDKTHVSTRVMGTYGYCAPEYAM 248
VI+RDLK SN+L+ E K+ DFG+A+ + + T + T Y APE +
Sbjct: 179 ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 235
Query: 249 T-GQLTLKSDVYSFGVVLLEIITGRK 273
+ + T D++S G + E++ R+
Sbjct: 236 SLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 40/239 (16%)
Query: 71 FRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVN 130
F+ + + G+G FG V G+ +ST VAIK++ ++ NRE + + L++LHHPN+V
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNIVQ 83
Query: 131 LIGY---CADGDQRLL----VYEYMPLGSLEDHLHDL-----------PPDKKRLDWTTR 172
L Y + D+R + V EY+P D LH PP ++
Sbjct: 84 LQSYFYTLGERDRRDIYLNVVMEYVP-----DTLHRCCRNYYRRQVAPPPILIKVFLFQL 138
Query: 173 MRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHP-KLSDFGLA-KLGPVGDKTH 230
+R + G +L + V +RD+K N+L+ E KL DFG A KL P +
Sbjct: 139 IR-----SIGCLHL---PSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSP----SE 186
Query: 231 VSTRVMGTYGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIITGRKAIDNTRAAGE-HNLV 287
+ + + Y APE Q T D++S G + E++ G +AG+ H +V
Sbjct: 187 PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 31/212 (14%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G+G FG V++G+ V I R RE E+ +L H N++ I A
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVKIFS-SREERSWFRE--AEIYQTVMLRHENILGFIA--A 104
Query: 137 DGD------QRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH--- 187
D Q LV +Y GSL D+L+ + + +++A A GL +LH
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 159
Query: 188 --DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVS-TRVMGTYGYCA 243
+ P + +RDLK NIL+ + ++D GLA + D ++ +GT Y A
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 219
Query: 244 PEYAMTGQLTLK-------SDVYSFGVVLLEI 268
PE + + +K +D+Y+ G+V EI
Sbjct: 220 PE-VLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 27/211 (12%)
Query: 77 LGEGGFGRVY-----KGRLESTNQVVAIKQLDR--------NGLQGNREFLVEVLMLSLL 123
LG G +G V G E +V+ Q D+ N + + E E+ +L L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 124 HHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGL 183
HPN++ L D LV E+ G L + + ++ + D I G+
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI----INRHKFDECDAANIMKQILSGI 159
Query: 184 EYLHDKANPPVIYRDLKCSNILLGEG---YHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
YLH +++RD+K NILL + K+ DFGL+ K + +GT
Sbjct: 160 CYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS---KDYKLRDRLGTAY 213
Query: 241 YCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
Y APE + + K DV+S GV++ ++ G
Sbjct: 214 YIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R +ST A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L +K+ L G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 191 NPPVIYRDLKCSNILLGEGYHPK----LSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + + DLK NI+L + PK + DFGLA G++ + GT + APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
L L++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 18/223 (8%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD--RNGLQGNREFLVEVLM 119
R + ++ +F+ LLGEG +G V + T ++VAIK+++ L R L E+ +
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKI 62
Query: 120 LSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGA 179
L H N++ + Y+ ++ LH + + D + I
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ-T 121
Query: 180 AKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKL---------GPVGDKTH 230
+ ++ LH VI+RDLK SN+L+ K+ DFGLA++ P G ++
Sbjct: 122 LRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 231 VSTRVMGTYGYCAPEYAMT-GQLTLKSDVYSFGVVLLEIITGR 272
+ T + T Y APE +T + + DV+S G +L E+ R
Sbjct: 179 M-TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R +ST A K + + + +R + EV +L + HPN++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L +K+ L G+ YLH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH--- 130
Query: 191 NPPVIYRDLKCSNILLGEGYHPK----LSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + + DLK NI+L + PK + DFGLA G++ + GT + APE
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEI 187
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
L L++D++S GV+ +++G
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R +ST A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L +K+ L G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 191 NPPVIYRDLKCSNILLGEGYHPK----LSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + + DLK NI+L + PK + DFGLA G++ + GT + APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEI 188
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
L L++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R +ST A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L +K+ L G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 191 NPPVIYRDLKCSNILLGEGYHPK----LSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + + DLK NI+L + PK + DFGLA G++ + GT + APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
L L++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 18/223 (8%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD--RNGLQGNREFLVEVLM 119
R + ++ +F+ LLGEG +G V + T ++VAIK+++ L R L E+ +
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKI 62
Query: 120 LSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGA 179
L H N++ + Y+ ++ LH + + D + I
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ-T 121
Query: 180 AKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKL---------GPVGDKTH 230
+ ++ LH VI+RDLK SN+L+ K+ DFGLA++ P G ++
Sbjct: 122 LRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 231 VSTRVMGTYGYCAPEYAMT-GQLTLKSDVYSFGVVLLEIITGR 272
+ T + T Y APE +T + + DV+S G +L E+ R
Sbjct: 179 M-TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R +ST A K + + + +R + EV +L + HPN++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L +K+ L G+ YLH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH--- 130
Query: 191 NPPVIYRDLKCSNILLGEGYHPK----LSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + + DLK NI+L + PK + DFGLA G++ + GT + APE
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEI 187
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
L L++D++S GV+ +++G
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R +ST A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L +K+ L G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 191 NPPVIYRDLKCSNILLGEGYHPK----LSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + + DLK NI+L + PK + DFGLA G++ + GT + APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
L L++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R +ST A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L +K+ L G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 191 NPPVIYRDLKCSNILLGEGYHPK----LSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + + DLK NI+L + PK + DFGLA G++ + GT + APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEI 188
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
L L++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 18/213 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V++ ++T +V K ++ E+ +++ LHHP L+NL
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
D + +L+ E++ G L D + + ++ + A +GL+++H+ + +++
Sbjct: 119 DKYEMVLILEFLSGGELFDR---IAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVH 172
Query: 197 RDLKCSNIL--LGEGYHPKLSDFGLA-KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
D+K NI+ + K+ DFGLA KL P + T + APE +
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNP----DEIVKVTTATAEFAAPEIVDREPVG 228
Query: 254 LKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNL 286
+D+++ GV+ +++G AGE +L
Sbjct: 229 FYTDMWAIGVLGYVLLSGLSPF-----AGEDDL 256
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R +ST A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L +K+ L G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 191 NPPVIYRDLKCSNILLGEGYHPK----LSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + + DLK NI+L + PK + DFGLA G++ + GT + APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
L L++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQ-LDRNGLQG-NREFLVEVLMLSLLHHPNLVNLIGY 134
+G+G FG V+K R T Q VA+K+ L N +G L E+ +L LL H N+VNLI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 135 C---ADGDQRLLVYEYMPLGSLEDHLHDLPPDK-KRLDWTTRMRIAAGAAKGLEYLHDKA 190
C A R Y+ E L L + + + R+ GL Y+H
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 145
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
+++RD+K +N+L+ KL+DFGLA+
Sbjct: 146 ---ILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGL---QGNREFLVEVLMLSLLHHPNLVNLIG 133
LG G +G V + + T AIK + ++ + + L EV +L L HPN++ L
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
+ D LV E G L D + +++ I G YLH K N
Sbjct: 89 FFEDKRNYYLVMEVYRGGELFDEI----ILRQKFSEVDAAVIMKQVLSGTTYLH-KHN-- 141
Query: 194 VIYRDLKCSNILLGEGYHP---KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTG 250
+++RDLK N+LL K+ DFGL+ VG K +GT Y APE +
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM---KERLGTAYYIAPE-VLRK 197
Query: 251 QLTLKSDVYSFGVVLLEIITG 271
+ K DV+S GV+L ++ G
Sbjct: 198 KYDEKCDVWSCGVILYILLCG 218
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R +ST A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L +K+ L G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 191 NPPVIYRDLKCSNILLGEGYHPK----LSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + + DLK NI+L + PK + DFGLA G++ + GT + APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEI 188
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
L L++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 7/199 (3%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNLIGYC 135
+GEG +G V VAIK++ Q + L E+ +L H N++ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 136 ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVI 195
+ Y+ +E L+ L ++L +GL+Y+H AN V+
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLL-KSQQLSNDHICYFLYQILRGLKYIH-SAN--VL 166
Query: 196 YRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTYGYCAPEYAMTGQLTL 254
+RDLK SN+L+ K+ DFGLA++ P D T T + T Y APE + +
Sbjct: 167 HRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYT 226
Query: 255 KS-DVYSFGVVLLEIITGR 272
KS D++S G +L E+++ R
Sbjct: 227 KSIDIWSVGCILAEMLSNR 245
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNRE---FLVEVLMLSLLHHPNLVNLIG 133
LG G +G V + + T AIK + ++ + L EV +L L HPN++ L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
+ D LV E G L D + +++ I G YLH K N
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEI----ILRQKFSEVDAAVIMKQVLSGTTYLH-KHN-- 124
Query: 194 VIYRDLKCSNILLGEGYHP---KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTG 250
+++RDLK N+LL K+ DFGL+ VG K +GT Y APE +
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM---KERLGTAYYIAPE-VLRK 180
Query: 251 QLTLKSDVYSFGVVLLEIITG 271
+ K DV+S GV+L ++ G
Sbjct: 181 KYDEKCDVWSCGVILYILLCG 201
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R +ST A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L +K+ L G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 191 NPPVIYRDLKCSNILLGEGYHPK----LSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + + DLK NI+L + PK + DFGLA G++ + GT + APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
L L++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R +ST A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L +K+ L G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 191 NPPVIYRDLKCSNILLGEGYHPK----LSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + + DLK NI+L + PK + DFGLA G++ + GT + APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
L L++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R +ST A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L +K+ L G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 191 NPPVIYRDLKCSNILLGEGYHPK----LSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + + DLK NI+L + PK + DFGLA G++ + GT + APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEI 188
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
L L++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 27/213 (12%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLH-HPNLVNLIGY 134
+LGEG RV T+Q A+K +++ EV ML H N++ LI +
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+ D+ LV+E M GS+ H+H ++ + + A L++LH+K +
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIH----KRRHFNELEASVVVQDVASALDFLHNKG---I 132
Query: 195 IYRDLKCSNILLGEGYHP------KLSDFGLAK-LGPVGDKTHVSTRVM----GTYGYCA 243
+RDLK NIL HP K+ DFGL + GD + +ST + G+ Y A
Sbjct: 133 AHRDLKPENILC---EHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 244 PEY--AMTGQLTL---KSDVYSFGVVLLEIITG 271
PE A + + ++ + D++S GV+L +++G
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQ-LDRNGLQGNR-EFLVEVLMLSLLHHPNLVNLIGY 134
+G+G FG V+K R T Q VA+K+ L N +G L E+ +L LL H N+VNLI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 135 C---ADGDQRLLVYEYMPLGSLEDHLHDLPPDK-KRLDWTTRMRIAAGAAKGLEYLHDKA 190
C A R Y+ E L L + + + R+ GL Y+H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 145
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
+++RD+K +N+L+ KL+DFGLA+
Sbjct: 146 ---ILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R +ST A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L +K+ L G+ YLH
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 191 NPPVIYRDLKCSNILLGEGYHPK----LSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + + DLK NI+L + PK + DFGLA G++ + GT + APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEI 188
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
L L++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQV-VAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNLIGY 134
+GEG +G V ++ N+V VAIK++ Q + L E+ +L H N++ +
Sbjct: 31 IGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+ Y+ +E L+ L + L +GL+Y+H AN V
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIH-SAN--V 145
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
++RDLK SN+LL K+ DFGLA++ P D T T + T Y APE + +
Sbjct: 146 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 205
Query: 254 LKS-DVYSFGVVLLEIITGR 272
KS D++S G +L E+++ R
Sbjct: 206 TKSIDIWSVGCILAEMLSNR 225
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLD--RNGLQGNREFLVEVLM 119
R + ++ +F+ LLGEG +G V + T ++VAIK+++ L R L E+ +
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKI 62
Query: 120 LSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGA 179
L H N++ + Y+ ++ LH + + D + I
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ-T 121
Query: 180 AKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKL---------GPVGDKTH 230
+ ++ LH VI+RDLK SN+L+ K+ DFGLA++ P G ++
Sbjct: 122 LRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 231 VSTRVMGTYGYCAPEYAMT-GQLTLKSDVYSFGVVLLEIITGR 272
+ + T Y APE +T + + DV+S G +L E+ R
Sbjct: 179 M-VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHH 125
K + + +G G +G V + + + VAIK+L R + + R + E+L+L + H
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQH 82
Query: 126 PNLVNLIGYCADGDQRLLVYEY---MPLGSLE-DHLHDLPPDKKRLDWTTRMRIAAGAAK 181
N++ L+ Y++ MP + + L ++++ + + K
Sbjct: 83 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQML-----K 137
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
GL+Y+H V++RDLK N+ + E K+ DFGLA+ +V TR Y
Sbjct: 138 GLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WY 189
Query: 242 CAPEYAMTG-QLTLKSDVYSFGVVLLEIITGR 272
APE ++ D++S G ++ E++TG+
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQV-VAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNLIGY 134
+GEG +G V ++ N+V VAIK++ Q + L E+ +L H N++ +
Sbjct: 31 IGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+ Y+ +E L+ L + L +GL+Y+H AN V
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIH-SAN--V 145
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
++RDLK SN+LL K+ DFGLA++ P D T T + T Y APE + +
Sbjct: 146 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 205
Query: 254 LKS-DVYSFGVVLLEIITGR 272
KS D++S G +L E+++ R
Sbjct: 206 TKSIDIWSVGCILAEMLSNR 225
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 61 FRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLML 120
F++L +TK L E G ++KGR + + VV + ++ + +R+F E L
Sbjct: 9 FKQLNFLTK-------LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRL 61
Query: 121 SLLHHPNLVNLIGYCAD--GDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG 178
+ HPN++ ++G C L+ +MP GSL + LH+ +D + ++ A
Sbjct: 62 RIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHE--GTNFVVDQSQAVKFALD 119
Query: 179 AAKGLEYLHDKANPPVIYRD-LKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMG 237
A+G+ +LH P+I R L ++++ E ++S + V R M
Sbjct: 120 MARGMAFLHTLE--PLIPRHALNSRSVMIDEDMTARIS------MADVKFSFQSPGR-MY 170
Query: 238 TYGYCAPEYAMTGQLTLK---SDVYSFGVVLLEIIT 270
+ APE +D++SF V+L E++T
Sbjct: 171 APAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 129/343 (37%), Gaps = 95/343 (27%)
Query: 77 LGEGGFGRVYKG-----RLESTNQVVAIKQLDRNGLQGN-REFLVEVLMLSLL-HHPNLV 129
LG G FG+V + + T + VA+K L + + E+ +L+ + HH N+V
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 130 NLIGYCA-DGDQRLLVYEYMPLGSLEDH---------------LHDLPPDKK-------- 165
NL+G C G +++ EY G+L ++ LH P +K
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEPGLEQG 154
Query: 166 ---RLDWTTRMRIAAGA-------------------------------------AKGLEY 185
RLD T A + A+G+E+
Sbjct: 155 KKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEF 214
Query: 186 LHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHV---STRVMGTYGYC 242
L + I+RDL NILL E K+ DFGLA+ + +V TR+ +
Sbjct: 215 LSSRK---CIHRDLAARNILLSENNVVKICDFGLAR-DIYKNPDYVRKGDTRL--PLKWM 268
Query: 243 APEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQ 302
APE + KSDV+S+GV+L EI + + V R+ +
Sbjct: 269 APESIFDKIYSTKSDVWSYGVLLWEIF--------SLGGSPYPGVQMDEDFCSRLREGMR 320
Query: 303 MADPTLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTAL 345
M P +Y +YQ + C P RP A++V L
Sbjct: 321 MRAP----EYSTPEIYQ---IMLDCWHRDPKERPRFAELVEKL 356
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQV-VAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNLIGY 134
+GEG +G V ++ N+V VAIK++ Q + L E+ +L H N++ +
Sbjct: 33 IGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDI 91
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+ Y+ +E L+ L + L +GL+Y+H AN V
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIH-SAN--V 147
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
++RDLK SN+LL K+ DFGLA++ P D T T + T Y APE + +
Sbjct: 148 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 207
Query: 254 LKS-DVYSFGVVLLEIITGR 272
KS D++S G +L E+++ R
Sbjct: 208 TKSIDIWSVGCILAEMLSNR 227
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 14/200 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLD--RNGLQGNREFLVEVLMLSLLHH-PNLVNLIG 133
LG G F V + +ST Q A K L R G E L E+ +L L P ++NL
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
+ + +L+ EY G + LP + + +R+ +G+ YLH
Sbjct: 97 VYENTSEIILILEYAAGGEIFSLC--LPELAEMVSENDVIRLIKQILEGVYYLHQNN--- 151
Query: 194 VIYRDLKCSNILLGEGY---HPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTG 250
+++ DLK NILL Y K+ DFG+++ +G + +MGT Y APE
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSR--KIGHACELR-EIMGTPEYLAPEILNYD 208
Query: 251 QLTLKSDVYSFGVVLLEIIT 270
+T +D+++ G++ ++T
Sbjct: 209 PITTATDMWNIGIIAYMLLT 228
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 77 LGEGGFGRVYKGRLESTNQV-VAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLV--NLI 132
+GEG +G V ++ N+V VAIK++ Q + L E+ +L H N++ N I
Sbjct: 31 IGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
+Q VY L +E L+ L + L +GL+Y+H AN
Sbjct: 90 IRAPTIEQMKDVYIVQDL--METDLYKLL-KTQHLSNDHICYFLYQILRGLKYIH-SAN- 144
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
V++RDLK SN+LL K+ DFGLA++ P D T T + T Y APE + +
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 252 LTLKS-DVYSFGVVLLEIITGR 272
KS D++S G +L E+++ R
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR 225
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 77 LGEGGFGRVYKGRLESTNQV-VAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLV--NLI 132
+GEG +G V ++ N+V VAIK++ Q + L E+ +L H N++ N I
Sbjct: 33 IGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDI 91
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
+Q VY L +E L+ L + L +GL+Y+H AN
Sbjct: 92 IRAPTIEQMKDVYIVQDL--METDLYKLL-KTQHLSNDHICYFLYQILRGLKYIH-SAN- 146
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
V++RDLK SN+LL K+ DFGLA++ P D T T + T Y APE + +
Sbjct: 147 -VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 252 LTLKS-DVYSFGVVLLEIITGR 272
KS D++S G +L E+++ R
Sbjct: 206 GYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQV-VAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNLIGY 134
+GEG +G V ++ N+V VAIK++ Q + L E+ +L H N++ +
Sbjct: 31 IGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+ Y+ +E L+ L + L +GL+Y+H AN V
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIH-SAN--V 145
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
++RDLK SN+LL K+ DFGLA++ P D T T + T Y APE + +
Sbjct: 146 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 205
Query: 254 LKS-DVYSFGVVLLEIITGR 272
KS D++S G +L E+++ R
Sbjct: 206 TKSIDIWSVGCILAEMLSNR 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQ-LDRNGLQGNR-EFLVEVLMLSLLHHPNLVNLIGY 134
+G+G FG V+K R T Q VA+K+ L N +G L E+ +L LL H N+VNLI
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 135 C---ADGDQRLLVYEYMPLGSLEDHLHDLPPDK-KRLDWTTRMRIAAGAAKGLEYLHDKA 190
C A R Y+ E L L + + + R+ GL Y+H
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 144
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
+++RD+K +N+L+ KL+DFGLA+
Sbjct: 145 ---ILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQV-VAIKQLDRNGLQG-NREFLVEVLMLSLLHHPNLVNLIGY 134
+GEG +G V ++ N+V VAIK++ Q + L E+ +L H N++ +
Sbjct: 35 IGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDI 93
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+ Y+ +E L+ L + L +GL+Y+H AN V
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIH-SAN--V 149
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
++RDLK SN+LL K+ DFGLA++ P D T T + T Y APE + +
Sbjct: 150 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 209
Query: 254 LKS-DVYSFGVVLLEIITGR 272
KS D++S G +L E+++ R
Sbjct: 210 TKSIDIWSVGCILAEMLSNR 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 77 LGEGGFGRVYKGRLESTNQV-VAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLV--NLI 132
+GEG +G V ++ N+V VAIK++ Q + L E+ +L H N++ N I
Sbjct: 33 IGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 91
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
+Q VY L +E L+ L + L +GL+Y+H AN
Sbjct: 92 IRAPTIEQMKDVYIVQDL--METDLYKLL-KTQHLSNDHICYFLYQILRGLKYIH-SAN- 146
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
V++RDLK SN+LL K+ DFGLA++ P D T T + T Y APE + +
Sbjct: 147 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 252 LTLKS-DVYSFGVVLLEIITGR 272
KS D++S G +L E+++ R
Sbjct: 206 GYTKSIDIWSVGCILAEMLSNR 227
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQ-LDRNGLQG-NREFLVEVLMLSLLHHPNLVNLIGY 134
+G+G FG V+K R T Q VA+K+ L N +G L E+ +L LL H N+VNLI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 135 C---ADGDQRLLVYEYMPLGSLEDHLHDLPPDK-KRLDWTTRMRIAAGAAKGLEYLHDKA 190
C A R Y+ E L L + + + R+ GL Y+H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 145
Query: 191 NPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
+++RD+K +N+L+ KL+DFGLA+
Sbjct: 146 ---ILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHH 125
K + + +G G +G V + + + VAIK+L R + + R + E+L+L + H
Sbjct: 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQH 100
Query: 126 PNLVNLIGYCADGDQRLLVYEY---MPLGSLE-DHLHDLPPDKKRLDWTTRMRIAAGAAK 181
N++ L+ Y++ MP + + + ++++ + + K
Sbjct: 101 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQML-----K 155
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
GL+Y+H V++RDLK N+ + E K+ DFGLA+ +V TR Y
Sbjct: 156 GLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WY 207
Query: 242 CAPEYAMTG-QLTLKSDVYSFGVVLLEIITGR 272
APE ++ D++S G ++ E++TG+
Sbjct: 208 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTY 239
+GL+Y+H AN V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 139 RGLKYIH-SAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 240 GYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITGR 272
Y APE + + KS D++S G +L E+++ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQV-VAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNLIGY 134
+GEG +G V ++ N+V VAIK++ Q + L E+ +L H N++ +
Sbjct: 39 IGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 97
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+ Y+ +E L+ L + L +GL+Y+H AN V
Sbjct: 98 IRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIH-SAN--V 153
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
++RDLK SN+LL K+ DFGLA++ P D T T + T Y APE + +
Sbjct: 154 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 213
Query: 254 LKS-DVYSFGVVLLEIITGR 272
KS D++S G +L E+++ R
Sbjct: 214 TKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQV-VAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNLIGY 134
+GEG +G V ++ N+V VAIK++ Q + L E+ +L H N++ +
Sbjct: 31 IGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+ Y+ +E L+ L + L +GL+Y+H AN V
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIH-SAN--V 145
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
++RDLK SN+LL K+ DFGLA++ P D T T + T Y APE + +
Sbjct: 146 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 205
Query: 254 LKS-DVYSFGVVLLEIITGR 272
KS D++S G +L E+++ R
Sbjct: 206 TKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQV-VAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNLIGY 134
+GEG +G V ++ N+V VAIK++ Q + L E+ +L H N++ +
Sbjct: 51 IGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 109
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+ Y+ +E L+ L + L +GL+Y+H AN V
Sbjct: 110 IRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIH-SAN--V 165
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
++RDLK SN+LL K+ DFGLA++ P D T T + T Y APE + +
Sbjct: 166 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 225
Query: 254 LKS-DVYSFGVVLLEIITGR 272
KS D++S G +L E+++ R
Sbjct: 226 TKSIDIWSVGCILAEMLSNR 245
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQ--LDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGY 134
+GEG +G V+K + T+++VA+K+ LD + L E+ +L L H N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+ LV+E+ L+ + D LD KGL + H + V
Sbjct: 70 LHSDKKLTLVFEFCD-QDLKKYFDSCNGD---LDPEIVKSFLFQLLKGLGFCHSRN---V 122
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTL 254
++RDLK N+L+ KL++FGLA+ + + + + V T Y P+ +L
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPDVLFGAKLYS 180
Query: 255 KS-DVYSFGVVLLEI 268
S D++S G + E+
Sbjct: 181 TSIDMWSAGCIFAEL 195
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTY 239
+GL+Y+H AN V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 155 RGLKYIH-SAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 240 GYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITGR 272
Y APE + + KS D++S G +L E+++ R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQV-VAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNLIGY 134
+GEG +G V ++ N+V VAIK++ Q + L E+ +L H N++ +
Sbjct: 36 IGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 94
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+ Y+ +E L+ L + L +GL+Y+H AN V
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIH-SAN--V 150
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
++RDLK SN+LL K+ DFGLA++ P D T T + T Y APE + +
Sbjct: 151 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 210
Query: 254 LKS-DVYSFGVVLLEIITGR 272
KS D++S G +L E+++ R
Sbjct: 211 TKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQV-VAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNLIGY 134
+GEG +G V ++ N+V VAIK++ Q + L E+ +L H N++ +
Sbjct: 37 IGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 95
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+ Y+ +E L+ L + L +GL+Y+H AN V
Sbjct: 96 IRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIH-SAN--V 151
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
++RDLK SN+LL K+ DFGLA++ P D T T + T Y APE + +
Sbjct: 152 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 211
Query: 254 LKS-DVYSFGVVLLEIITGR 272
KS D++S G +L E+++ R
Sbjct: 212 TKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQV-VAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNLIGY 134
+GEG +G V ++ N+V VAIK++ Q + L E+ +L H N++ +
Sbjct: 28 IGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 86
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+ Y+ +E L+ L + L +GL+Y+H AN V
Sbjct: 87 IRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIH-SAN--V 142
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
++RDLK SN+LL K+ DFGLA++ P D T T + T Y APE + +
Sbjct: 143 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 202
Query: 254 LKS-DVYSFGVVLLEIITGR 272
KS D++S G +L E+++ R
Sbjct: 203 TKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 77 LGEGGFGRVYKGRLESTNQV-VAIKQLDRNGLQGN-REFLVEVLMLSLLHHPNLVNLIGY 134
+GEG +G V ++ N+V VAIK++ Q + L E+ +L H N++ +
Sbjct: 35 IGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+ Y+ +E L+ L + L +GL+Y+H AN V
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIH-SAN--V 149
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTYGYCAPEYAMTGQLT 253
++RDLK SN+LL K+ DFGLA++ P D T T + T Y APE + +
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 209
Query: 254 LKS-DVYSFGVVLLEIITGR 272
KS D++S G +L E+++ R
Sbjct: 210 TKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTY 239
+GL+Y+H AN V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 133 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 240 GYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITGR 272
Y APE + + KS D++S G +L E+++ R
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTY 239
+GL+Y+H AN V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 139 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 240 GYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITGR 272
Y APE + + KS D++S G +L E+++ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTY 239
+GL+Y+H AN V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 133 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 240 GYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITGR 272
Y APE + + KS D++S G +L E+++ R
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTY 239
+GL+Y+H AN V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 139 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 240 GYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITGR 272
Y APE + + KS D++S G +L E+++ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 66 AVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHH 125
A++ F + LG G VY+ + + T + A+K L + + E+ +L L H
Sbjct: 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLLRLSH 107
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK---- 181
PN++ L + LV E + G L D + + R AA A K
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVE--------KGYYSERDAADAVKQILE 159
Query: 182 GLEYLHDKANPPVIYRDLKCSNILLGE---GYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
+ YLH+ +++RDLK N+L K++DFGL+K+ V + + T V GT
Sbjct: 160 AVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKI--VEHQVLMKT-VCGT 213
Query: 239 YGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTR 279
GYCAPE + D++S G++ ++ G + + R
Sbjct: 214 PGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER 254
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V++ + T A+K++ + E++ + L P +V L G
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVR 136
Query: 137 DGDQRLLVYEYMPLGSLEDHLHD---LPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
+G + E + GSL + + LP D+ + A +GLEYLH +
Sbjct: 137 EGPWVNIFMELLEGGSLGQLVKEQGCLPEDRA-------LYYLGQALEGLEYLHSRR--- 186
Query: 194 VIYRDLKCSNILLG-EGYHPKLSDFGLAK-LGP--VGDKTHVSTRVMGTYGYCAPEYAMT 249
+++ D+K N+LL +G H L DFG A L P +G + GT + APE +
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG 246
Query: 250 GQLTLKSDVYSFGVVLLEIITG 271
K DV+S ++L ++ G
Sbjct: 247 RSCDAKVDVWSSCCMMLHMLNG 268
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V++ + T A+K++ + E++ + L P +V L G
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVR 155
Query: 137 DGDQRLLVYEYMPLGSLEDHLHD---LPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
+G + E + GSL + + LP D+ + A +GLEYLH +
Sbjct: 156 EGPWVNIFMELLEGGSLGQLVKEQGCLPEDRA-------LYYLGQALEGLEYLHSRR--- 205
Query: 194 VIYRDLKCSNILLG-EGYHPKLSDFGLAK-LGP--VGDKTHVSTRVMGTYGYCAPEYAMT 249
+++ D+K N+LL +G H L DFG A L P +G + GT + APE +
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 250 GQLTLKSDVYSFGVVLLEIITG 271
K DV+S ++L ++ G
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNG 287
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQL----DRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
+GEG +G VYK + + + A+K++ + G+ + E+ +L L H N+V L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLY 66
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
+ +LV+E++ +D L + L+ T G+ Y HD+
Sbjct: 67 DVIHTKKRLVLVFEHLD----QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR-- 120
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM-TGQ 251
V++RDLK N+L+ K++DFGLA+ G T + T Y AP+ M + +
Sbjct: 121 -VLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEIVTLWYRAPDVLMGSKK 177
Query: 252 LTLKSDVYSFGVVLLEIITG 271
+ D++S G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 21/202 (10%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQL----DRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
+GEG +G VYK + + + A+K++ + G+ + E+ +L L H N+V L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLY 66
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
+ +LV+E++ +D L + L+ T G+ Y HD+
Sbjct: 67 DVIHTKKRLVLVFEHLD----QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR-- 120
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLAK-LG-PVGDKTHVSTRVMGTYGYCAPEYAM-T 249
V++RDLK N+L+ K++DFGLA+ G PV TH T Y AP+ M +
Sbjct: 121 -VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMGS 175
Query: 250 GQLTLKSDVYSFGVVLLEIITG 271
+ + D++S G + E++ G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 21/202 (10%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQL----DRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
+GEG +G VYK + + + A+K++ + G+ + E+ +L L H N+V L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLY 66
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANP 192
+ +LV+E++ +D L + L+ T G+ Y HD+
Sbjct: 67 DVIHTKKRLVLVFEHLD----QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR-- 120
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLAK-LG-PVGDKTHVSTRVMGTYGYCAPEYAM-T 249
V++RDLK N+L+ K++DFGLA+ G PV TH T Y AP+ M +
Sbjct: 121 -VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMGS 175
Query: 250 GQLTLKSDVYSFGVVLLEIITG 271
+ + D++S G + E++ G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 103/240 (42%), Gaps = 23/240 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R +ST A K + + + +R E EV +L + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L K+ L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 191 NPPVIYRDLKCSNILLGEGY----HPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + DLK NI+L + H KL DFGLA + D + GT + APE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEI 189
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITGRK-AIDNTRAAGEHNLVAWARPLFKDRRKFSQMAD 305
L L++D++S GV+ +++G + +T+ N+ A + D FSQ ++
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDF--DEEFFSQTSE 247
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 103/240 (42%), Gaps = 23/240 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R +ST A K + + + +R E EV +L + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L K+ L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 191 NPPVIYRDLKCSNILLGEGY----HPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + DLK NI+L + H KL DFGLA + D + GT + APE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEI 189
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITGRK-AIDNTRAAGEHNLVAWARPLFKDRRKFSQMAD 305
L L++D++S GV+ +++G + +T+ N+ A + D FSQ ++
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDF--DEEFFSQTSE 247
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R +ST A K + + + +R E EV +L + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L K+ L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 191 NPPVIYRDLKCSNILLGEGY----HPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + DLK NI+L + H KL DFGLA + D + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEI 189
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
L L++D++S GV+ +++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R +ST A K + + + +R E EV +L + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L K+ L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 191 NPPVIYRDLKCSNILLGEGY----HPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + DLK NI+L + H KL DFGLA + D + GT + APE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEI 189
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
L L++D++S GV+ +++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLH-HPNLVNLIGY 134
LLGEG + +V + A+K +++ EV L + N++ LI +
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF 79
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
D + LV+E + GS+ H+ +K + R+ A L++LH K +
Sbjct: 80 FEDDTRFYLVFEKLQGGSILAHIQ----KQKHFNEREASRVVRDVAAALDFLHTKG---I 132
Query: 195 IYRDLKCSNILLG--EGYHP-KLSDFGLAKLGPVGDK-THVSTRVM----GTYGYCAPEY 246
+RDLK NIL E P K+ DF L + + T ++T + G+ Y APE
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 247 --AMTGQLTL---KSDVYSFGVVLLEIITG 271
T Q T + D++S GVVL +++G
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNR------EFLVEVLMLSLLHHPNLVN 130
LG G F V K R +ST A K + + + +R E EV +L + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 131 LIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKA 190
L + +L+ E + G L D L K+ L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 191 NPPVIYRDLKCSNILLGEGY----HPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEY 246
+ + DLK NI+L + H KL DFGLA + D + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEI 189
Query: 247 AMTGQLTLKSDVYSFGVVLLEIITG 271
L L++D++S GV+ +++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 27/213 (12%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLH-HPNLVNLIGY 134
+LGEG RV T+Q A+K +++ EV ML H N++ LI +
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+ D+ LV+E M GS+ H+H ++ + + A L++LH+K +
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIH----KRRHFNELEASVVVQDVASALDFLHNKG---I 132
Query: 195 IYRDLKCSNILLGEGYHP------KLSDFGLAK-LGPVGDKTHVSTRVM----GTYGYCA 243
+RDLK NIL HP K+ DF L + GD + +ST + G+ Y A
Sbjct: 133 AHRDLKPENILCE---HPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 244 PEY--AMTGQLTL---KSDVYSFGVVLLEIITG 271
PE A + + ++ + D++S GV+L +++G
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 138/324 (42%), Gaps = 37/324 (11%)
Query: 28 STSEKLKVNSTVDVKKEASKDGGSDHIAAHTFTFRELAAV-TKNF--RADCL-----LGE 79
S S+ K N + + KEA + + + ++ +NF +AD L LG
Sbjct: 2 SQSKGKKRNPGLKIPKEAFEQPQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIMELGR 61
Query: 80 GGFGRVYKGRLESTNQVVAIKQLDRN-GLQGNREFLVEV-LMLSLLHHPNLVNLIGYCAD 137
G +G V K R + Q++A+K++ Q + L+++ + + + P V G
Sbjct: 62 GAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR 121
Query: 138 GDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYR 197
+ E M SL+ + + + +IA K LE+LH K + VI+R
Sbjct: 122 EGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHR 178
Query: 198 DLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQL----- 252
D+K SN+L+ K+ DFG++ G + D T G Y APE + +L
Sbjct: 179 DVKPSNVLINALGQVKMCDFGIS--GYLVDSV-AKTIDAGCKPYMAPE-RINPELNQKGY 234
Query: 253 TLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQGQY 312
++KSD++S G+ ++E+ R D +W P F+ ++ + P L
Sbjct: 235 SVKSDIWSLGITMIELAILRFPYD-----------SWGTP-FQQLKQVVEEPSPQLPAD- 281
Query: 313 PVRGLYQALAVAAMCVQEQPNMRP 336
+ + + + C+++ RP
Sbjct: 282 --KFSAEFVDFTSQCLKKNSKERP 303
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYC 135
++G G FG V++ +L +++ VAIK++ ++ NRE + + ++ HPN+V+L +
Sbjct: 47 VIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRELQI----MRIVKHPNVVDLKAFF 101
Query: 136 -ADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
++GD++ V+ + L + + ++ +L T M + + L Y+H
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG 161
Query: 191 NPPVIYRDLKCSNILLGEGYHP-KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM- 248
+ +RD+K N+LL KL DFG AK+ G+ + + + Y APE
Sbjct: 162 ---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP---NVSXICSRYYRAPELIFG 215
Query: 249 TGQLTLKSDVYSFGVVLLEIITGR 272
T D++S G V+ E++ G+
Sbjct: 216 ATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 100/227 (44%), Gaps = 32/227 (14%)
Query: 58 TFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFL 114
T T E+ AV ++ + +G G +G V T VAIK+L R + L R +
Sbjct: 17 TKTAWEVRAVYRDLQP---VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR 73
Query: 115 VEVLMLSLLHHPNLVNLIGYCA------DGDQRLLVYEYM--PLGSLEDHLHDLPPDKKR 166
E+ +L + H N++ L+ D LV +M LG L H L D+ +
Sbjct: 74 -ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH-EKLGEDRIQ 131
Query: 167 LDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVG 226
+ KGL Y+H +I+RDLK N+ + E K+ DFGLA+
Sbjct: 132 F-------LVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSE 181
Query: 227 DKTHVSTRVMGTYGYCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGR 272
V TR Y APE + + T D++S G ++ E+ITG+
Sbjct: 182 MXGXVVTR-----WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 20/201 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G G FG R + N++VA+K ++R G + + E++ L HPN+V
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 137 DGDQRLLVYEYMPLGSLEDHLHD---LPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
+V EY G L + + + D+ R + + G+ Y H
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYAHAMQ--- 135
Query: 194 VIYRDLKCSNILLGEGYHP--KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
V +RDLK N LL P K++DFG +K + + +GT Y APE + +
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQ---PKSAVGTPAYIAPEVLLKKE 192
Query: 252 LTLK-SDVYSFGVVLLEIITG 271
K +DV+S GV L ++ G
Sbjct: 193 YDGKVADVWSCGVTLYVMLVG 213
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 103/239 (43%), Gaps = 36/239 (15%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRN--GLQGNRE------FLVEVLMLSLLHHPNL 128
LG G G V T + VAIK + + + RE E+ +L L+HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
+ + + D + +V E M G L D + KRL T ++YLH+
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKV----VGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 189 KANPPVIYRDLKCSNILLG---EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
+I+RDLK N+LL E K++DFG +K+ +G+ + + T + GT Y APE
Sbjct: 133 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPE 186
Query: 246 YAM---TGQLTLKSDVYSFGVVLLEIITGRKAIDNTR---------AAGEHNLV--AWA 290
+ T D +S GV+L ++G R +G++N + WA
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 41/225 (18%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---------NGLQGNREFLV--EV 117
++F ++G G FG V +L++ ++V A+K L++ + R+ LV +
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 118 LMLSLLHHP-----NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTR 172
++ LH+ NL ++ Y GD L L ED L P + R +
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTL------LSKFEDRL---PEEMARF-YLAE 183
Query: 173 MRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVS 232
M IA + L Y+H RD+K NIL+ H +L+DFG + L + D T S
Sbjct: 184 MVIAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQS 233
Query: 233 TRVMGTYGYCAPEY--AM---TGQLTLKSDVYSFGVVLLEIITGR 272
+ +GT Y +PE AM G+ + D +S GV + E++ G
Sbjct: 234 SVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 103/239 (43%), Gaps = 36/239 (15%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRN--GLQGNRE------FLVEVLMLSLLHHPNL 128
LG G G V T + VAIK + + + RE E+ +L L+HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
+ + + D + +V E M G L D + KRL T ++YLH+
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKV----VGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 189 KANPPVIYRDLKCSNILLG---EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
+I+RDLK N+LL E K++DFG +K+ +G+ + + T + GT Y APE
Sbjct: 133 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPE 186
Query: 246 YAM---TGQLTLKSDVYSFGVVLLEIITGRKAIDNTR---------AAGEHNLV--AWA 290
+ T D +S GV+L ++G R +G++N + WA
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 103/239 (43%), Gaps = 36/239 (15%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRN--GLQGNRE------FLVEVLMLSLLHHPNL 128
LG G G V T + VAIK + + + RE E+ +L L+HP +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
+ + + D + +V E M G L D + KRL T ++YLH+
Sbjct: 77 IKIKNF-FDAEDYYIVLELMEGGELFDKV----VGNKRLKEATCKLYFYQMLLAVQYLHE 131
Query: 189 KANPPVIYRDLKCSNILLG---EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
+I+RDLK N+LL E K++DFG +K+ +G+ + + T + GT Y APE
Sbjct: 132 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPE 185
Query: 246 YAM---TGQLTLKSDVYSFGVVLLEIITGRKAIDNTR---------AAGEHNLV--AWA 290
+ T D +S GV+L ++G R +G++N + WA
Sbjct: 186 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 244
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 20/201 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G G FG R + +N++VA+K ++R G + + E++ L HPN+V
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 137 DGDQRLLVYEYMPLGSLEDHLHD---LPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
+V EY G L + + + D+ R + + G+ Y H
Sbjct: 85 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYCHAMQ--- 134
Query: 194 VIYRDLKCSNILLGEGYHP--KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
V +RDLK N LL P K+ DFG +K + + +GT Y APE + +
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLKKE 191
Query: 252 LTLK-SDVYSFGVVLLEIITG 271
K +DV+S GV L ++ G
Sbjct: 192 YDGKVADVWSCGVTLYVMLVG 212
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 103/239 (43%), Gaps = 36/239 (15%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRN--GLQGNRE------FLVEVLMLSLLHHPNL 128
LG G G V T + VAIK + + + RE E+ +L L+HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
+ + + D + +V E M G L D + KRL T ++YLH+
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKV----VGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 189 KANPPVIYRDLKCSNILLG---EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
+I+RDLK N+LL E K++DFG +K+ +G+ + + T + GT Y APE
Sbjct: 133 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPE 186
Query: 246 YAM---TGQLTLKSDVYSFGVVLLEIITGRKAIDNTR---------AAGEHNLV--AWA 290
+ T D +S GV+L ++G R +G++N + WA
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 29/217 (13%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNRE-FLVEVLMLSLLHHPNLVNLIGYC 135
LG GGFG V++ + + + AIK++ + RE + EV L+ L HP +V
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 136 ADGDQ---------RLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTR---MRIAAGAAKGL 183
+ + ++ +Y M L E+ L D + ++ R + I A+ +
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKEN-LKDWMNGRCTIEERERSVCLHIFLQIAEAV 131
Query: 184 EYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK-----------LGPVGDKTHVS 232
E+LH K +++RDLK SNI K+ DFGL L P+ +
Sbjct: 132 EFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHT 188
Query: 233 TRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEII 269
+V GT Y +PE + K D++S G++L E++
Sbjct: 189 GQV-GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV---EVLMLSLLHHPNLVNLIG 133
+G G +G V K + + Q++A+K++ + ++ L+ +V+M S P +V G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSS-DCPYIVQFYG 88
Query: 134 YCADGDQRLLVYEYMPLG------SLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
+ E M + L D+ P++ +I K L +L
Sbjct: 89 ALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEE------ILGKITLATVKALNHL- 141
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE-- 245
K N +I+RD+K SNILL + KL DFG++ G + D TR G Y APE
Sbjct: 142 -KENLKIIHRDIKPSNILLDRSGNIKLCDFGIS--GQLVDSI-AKTRDAGCRPYMAPERI 197
Query: 246 --YAMTGQLTLKSDVYSFGVVLLEIITGR 272
A ++SDV+S G+ L E+ TGR
Sbjct: 198 DPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 103/240 (42%), Gaps = 36/240 (15%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRN--GLQGNRE------FLVEVLMLSLLHHPNL 128
LG G G V T + VAIK + + + RE E+ +L L+HP +
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
+ + + D + +V E M G L D + KRL T ++YLH+
Sbjct: 84 IKIKNF-FDAEDYYIVLELMEGGELFDKV----VGNKRLKEATCKLYFYQMLLAVQYLHE 138
Query: 189 KANPPVIYRDLKCSNILLG---EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
+I+RDLK N+LL E K++DFG +K+ +G+ + + T + GT Y APE
Sbjct: 139 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPE 192
Query: 246 YAM---TGQLTLKSDVYSFGVVLLEIITGRKAIDNTR---------AAGEHNLV--AWAR 291
+ T D +S GV+L ++G R +G++N + WA
Sbjct: 193 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAE 252
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 102/234 (43%), Gaps = 22/234 (9%)
Query: 48 DGGSDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGL 107
D G++++ + F + V + +G G + + ++TN A+K +D++
Sbjct: 12 DLGTENLYFQSMVFSDGYVVKET------IGVGSYSECKRCVHKATNMEYAVKVIDKSKR 65
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRL 167
+ E +E+L L HPN++ L DG LV E M G L D + +K
Sbjct: 66 DPSEE--IEIL-LRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKI----LRQKFF 118
Query: 168 DWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNIL-LGEGYHP---KLSDFGLAKLG 223
+ K +EYLH + V++RDLK SNIL + E +P ++ DFG AK
Sbjct: 119 SEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK-- 173
Query: 224 PVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDN 277
+ + + T + APE D++S G++L ++ G N
Sbjct: 174 QLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTY 239
+GL+Y+H AN V++RDLK SN+LL K+ DFGLA++ P D T + T
Sbjct: 139 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 240 GYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITGR 272
Y APE + + KS D++S G +L E+++ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLG-PVGDKTHVSTRVMGTY 239
+GL+Y+H AN V++RDLK SN+LL K+ DFGLA++ P D T + T
Sbjct: 140 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 240 GYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITGR 272
Y APE + + KS D++S G +L E+++ R
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 67 VTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLH-H 125
V FR +G G FG +Y G TN+ VAIK N + + L E + +L
Sbjct: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--ENVKTKHPQLLYESKIYRILQGG 62
Query: 126 PNLVNLIGYCADGDQRLLVYEYMPLG-SLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLE 184
+ N+ + +GD +LV + LG SLED + ++L T + +A +E
Sbjct: 63 TGIPNVRWFGVEGDYNVLVMDL--LGPSLEDLFNFC---SRKLSLKTVLMLADQMINRVE 117
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPK---LSDFGLA-KLGPVGDKTHVSTR----VM 236
++H K+ ++RD+K N L+G G + DFGLA K H+ R +
Sbjct: 118 FVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLT 174
Query: 237 GTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
GT Y + + + + + D+ S G VL+ + G
Sbjct: 175 GTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRG 209
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 132/340 (38%), Gaps = 84/340 (24%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + +T + VA+K L L+ L ++ + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 130 NLIGYCAD-GDQRLLVYEYMPLGSL------------------------EDHLHDLPPD- 163
NL+G C G +++ E+ G+L +D++ +P D
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 156
Query: 164 KKRLDWTTRMRIAAGAA----KGLEYLHDKANPPVIY----------------------- 196
K+RLD T + +A + K L + ++ P +Y
Sbjct: 157 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 216
Query: 197 -------RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVST-RVMGTYGYCAPEYAM 248
RDL NILL E K+ DFGLA+ D +V + APE
Sbjct: 217 ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIF 275
Query: 249 TGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTL 308
T++SDV+SFGV+L EI + A + V + ++ ++M P
Sbjct: 276 DRVYTIQSDVWSFGVLLWEIF--------SLGASPYPGVKIDEEFCRRLKEGTRMRAP-- 325
Query: 309 QGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYL 348
Y +YQ + C +P+ RP +++V L L
Sbjct: 326 --DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHLGNL 360
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 34/214 (15%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G G + + ++TN A+K +D++ E +E+L L HPN++ L
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEE--IEIL-LRYGQHPNIITLKDVYD 86
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
DG +V E M G L D + +K + K +EYLH + V++
Sbjct: 87 DGKYVYVVTELMKGGELLDKI----LRQKFFSEREASAVLFTITKTVEYLHAQG---VVH 139
Query: 197 RDLKCSNIL-LGEGYHP---KLSDFGLAK---------LGPVGDKTHVSTRVMGTYGYCA 243
RDLK SNIL + E +P ++ DFG AK + P V+ V+ GY A
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDA 199
Query: 244 PEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDN 277
D++S GV+L ++TG N
Sbjct: 200 A-----------CDIWSLGVLLYTMLTGYTPFAN 222
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 14/208 (6%)
Query: 67 VTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHP 126
+ K F +LG G F V+ + T ++ A+K + ++ + E+ +L + H
Sbjct: 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHE 66
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYL 186
N+V L LV + + G L D + + ++ D + ++ A K YL
Sbjct: 67 NIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEK-DASLVIQQVLSAVK---YL 122
Query: 187 HDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCA 243
H+ +++RDLK N+L E ++DFGL+K+ G + + GT GY A
Sbjct: 123 HENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTPGYVA 175
Query: 244 PEYAMTGQLTLKSDVYSFGVVLLEIITG 271
PE + D +S GV+ ++ G
Sbjct: 176 PEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 132/340 (38%), Gaps = 84/340 (24%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + +T + VA+K L L+ L ++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 130 NLIGYCAD-GDQRLLVYEYMPLGSL------------------------EDHLHDLPPD- 163
NL+G C G +++ E+ G+L +D++ +P D
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 154
Query: 164 KKRLDWTTRMRIAAGAA----KGLEYLHDKANPPVIY----------------------- 196
K+RLD T + +A + K L + ++ P +Y
Sbjct: 155 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 214
Query: 197 -------RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVST-RVMGTYGYCAPEYAM 248
RDL NILL E K+ DFGLA+ D +V + APE
Sbjct: 215 ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIF 273
Query: 249 TGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTL 308
T++SDV+SFGV+L EI + A + V + ++ ++M P
Sbjct: 274 DRVYTIQSDVWSFGVLLWEIF--------SLGASPYPGVKIDEEFCRRLKEGTRMRAP-- 323
Query: 309 QGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYL 348
Y +YQ + C +P+ RP +++V L L
Sbjct: 324 --DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHLGNL 358
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 16/205 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G G + + ++TN A+K +D++ + E +E+L L HPN++ L
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEE--IEIL-LRYGQHPNIITLKDVYD 91
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
DG LV E M G L D + +K + K +EYLH + V++
Sbjct: 92 DGKHVYLVTELMRGGELLDKI----LRQKFFSEREASFVLHTIGKTVEYLHSQG---VVH 144
Query: 197 RDLKCSNIL-LGEGYHP---KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQL 252
RDLK SNIL + E +P ++ DFG AK + + + T + APE
Sbjct: 145 RDLKPSNILYVDESGNPECLRICDFGFAK--QLRAENGLLMTPCYTANFVAPEVLKRQGY 202
Query: 253 TLKSDVYSFGVVLLEIITGRKAIDN 277
D++S G++L ++ G N
Sbjct: 203 DEGCDIWSLGILLYTMLAGYTPFAN 227
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 26/224 (11%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEV---L 118
++ A +R LLG+GGFG V+ G + VAIK + RN + G V L
Sbjct: 24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL 83
Query: 119 MLSLLH-------HPNLVNLIGYCADGDQRLLVYEY-MPLGSLEDHLHDLPPDKKRLDWT 170
++LL HP ++ L+ + + +LV E +P L D++ +K L
Sbjct: 84 EVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYIT----EKGPLGEG 139
Query: 171 TRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNIL--LGEGYHPKLSDFGLAKLGPVGDK 228
+++ H + V++RD+K NIL L G KL DFG L + D+
Sbjct: 140 PSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCA-KLIDFGSGAL--LHDE 193
Query: 229 THVSTRVMGTYGYCAPEYAMTGQL-TLKSDVYSFGVVLLEIITG 271
+ T GT Y PE+ Q L + V+S G++L +++ G
Sbjct: 194 PY--TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 132/340 (38%), Gaps = 84/340 (24%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + +T + VA+K L L+ L ++ + HH N+V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 130 NLIGYCAD-GDQRLLVYEYMPLGSL------------------------EDHLHDLPPD- 163
NL+G C G +++ E+ G+L +D++ +P D
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 147
Query: 164 KKRLDWTTRMRIAAGAA----KGLEYLHDKANPPVIY----------------------- 196
K+RLD T + +A + K L + ++ P +Y
Sbjct: 148 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 207
Query: 197 -------RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVST-RVMGTYGYCAPEYAM 248
RDL NILL E K+ DFGLA+ D +V + APE
Sbjct: 208 ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIF 266
Query: 249 TGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTL 308
T++SDV+SFGV+L EI + A + V + ++ ++M P
Sbjct: 267 DRVYTIQSDVWSFGVLLWEIF--------SLGASPYPGVKIDEEFCRRLKEGTRMRAP-- 316
Query: 309 QGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYL 348
Y +YQ + C +P+ RP +++V L L
Sbjct: 317 --DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHLGNL 351
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 16/153 (10%)
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLE 184
HP+++ LI LV++ M G L D+L +K L I + +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL----TEKVALSEKETRSIMRSLLEAVS 214
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAP 244
+LH AN +++RDLK NILL + +LSDFG + G+K + GT GY AP
Sbjct: 215 FLH--ANN-IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAP 268
Query: 245 EYAMTGQLTL------KSDVYSFGVVLLEIITG 271
E + D+++ GV+L ++ G
Sbjct: 269 EILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 132/340 (38%), Gaps = 84/340 (24%)
Query: 77 LGEGGFGRVYKGRL-----ESTNQVVAIKQLDRNGLQGNREFLVEVL--MLSLLHHPNLV 129
LG G FG+V + +T + VA+K L L+ L ++ + HH N+V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 130 NLIGYCAD-GDQRLLVYEYMPLGSL------------------------EDHLHDLPPD- 163
NL+G C G +++ E+ G+L +D++ +P D
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 149
Query: 164 KKRLDWTTRMRIAAGAA----KGLEYLHDKANPPVIY----------------------- 196
K+RLD T + +A + K L + ++ P +Y
Sbjct: 150 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 209
Query: 197 -------RDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVST-RVMGTYGYCAPEYAM 248
RDL NILL E K+ DFGLA+ D +V + APE
Sbjct: 210 ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIF 268
Query: 249 TGQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTL 308
T++SDV+SFGV+L EI + A + V + ++ ++M P
Sbjct: 269 DRVYTIQSDVWSFGVLLWEIF--------SLGASPYPGVKIDEEFCRRLKEGTRMRAP-- 318
Query: 309 QGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALTYL 348
Y +YQ + C +P+ RP +++V L L
Sbjct: 319 --DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHLGNL 353
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 30/219 (13%)
Query: 65 AAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQL----DRNGLQGNREFLVEVLML 120
A +R LGEG +G VYK TN+ VAIK++ + G+ G + EV +L
Sbjct: 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA--IREVSLL 87
Query: 121 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG-- 178
L H N++ L + L++EY L+ ++ D PD MR+
Sbjct: 88 KELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYM-DKNPD-------VSMRVIKSFL 138
Query: 179 --AAKGLEYLHDKANPPVIYRDLKCSNILL-----GEGYHPKLSDFGLAKLGPVGDKTHV 231
G+ + H + ++RDLK N+LL E K+ DFGLA+ G
Sbjct: 139 YQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR--AFGIPIRQ 193
Query: 232 STRVMGTYGYCAPEYAM-TGQLTLKSDVYSFGVVLLEII 269
T + T Y PE + + + D++S + E++
Sbjct: 194 FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 43/251 (17%)
Query: 58 TFTFRELAA----VTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGN 110
TF +ELA V + ++ +G G +G V T VA+K+L R + +
Sbjct: 3 TFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 62
Query: 111 REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDH-------------L 157
R + E+ +L + H N++ L+ + P SLE+ L
Sbjct: 63 RTYR-ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADL 109
Query: 158 HDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDF 217
+++ K D + I +GL+Y+H + +I+RDLK SN+ + E K+ DF
Sbjct: 110 NNIVKCAKLTDDHVQFLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 165
Query: 218 GLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAID 276
GLA+ +V+TR Y APE + D++S G ++ E++TGR
Sbjct: 166 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
Query: 277 NTRAAGEHNLV 287
T + L+
Sbjct: 221 GTDHIDQLKLI 231
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 36/239 (15%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRN--GLQGNRE------FLVEVLMLSLLHHPNL 128
LG G G V T + VAI+ + + + RE E+ +L L+HP +
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
+ + + D + +V E M G L D + KRL T ++YLH+
Sbjct: 203 IKIKNF-FDAEDYYIVLELMEGGELFDKV----VGNKRLKEATCKLYFYQMLLAVQYLHE 257
Query: 189 KANPPVIYRDLKCSNILLG---EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
+I+RDLK N+LL E K++DFG +K+ +G+ + + T + GT Y APE
Sbjct: 258 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPE 311
Query: 246 YAM---TGQLTLKSDVYSFGVVLLEIITGRKAIDNTR---------AAGEHNLV--AWA 290
+ T D +S GV+L ++G R +G++N + WA
Sbjct: 312 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 370
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
LG G FG V++ + + T A+K++ + + E++ + L P +V L G
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVR 134
Query: 137 DGDQRLLVYEYM---PLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
+G + E + LG L + LP D+ + A +GLEYLH +
Sbjct: 135 EGPWVNIFMELLEGGSLGQLIKQMGCLPEDRA-------LYYLGQALEGLEYLHTRR--- 184
Query: 194 VIYRDLKCSNILLG-EGYHPKLSDFGLAK-LGP--VGDKTHVSTRVMGTYGYCAPEYAMT 249
+++ D+K N+LL +G L DFG A L P +G + GT + APE M
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 250 GQLTLKSDVYSFGVVLLEIITG 271
K D++S ++L ++ G
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGL---------QGNRE 112
+E+ ++F ++G G FG V ++++T ++ A+K L++ + + R+
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 113 FLV--EVLMLSLLHHP-----NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKK 165
LV + ++ LH+ +L ++ Y GD L L ED L P D
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTL------LSKFEDKL---PEDMA 177
Query: 166 RLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPV 225
R + M +A + L Y+H RD+K N+LL H +L+DFG + L
Sbjct: 178 RF-YIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFG-SCLKMN 226
Query: 226 GDKTHVSTRVMGTYGYCAPEY--AM---TGQLTLKSDVYSFGVVLLEIITGR 272
D T S+ +GT Y +PE AM G+ + D +S GV + E++ G
Sbjct: 227 DDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 85 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 131
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 36/239 (15%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRN--GLQGNRE------FLVEVLMLSLLHHPNL 128
LG G G V T + VAI+ + + + RE E+ +L L+HP +
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
+ + + D + +V E M G L D + KRL T ++YLH+
Sbjct: 217 IKIKNF-FDAEDYYIVLELMEGGELFDKV----VGNKRLKEATCKLYFYQMLLAVQYLHE 271
Query: 189 KANPPVIYRDLKCSNILLG---EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPE 245
+I+RDLK N+LL E K++DFG +K+ +G+ + + T + GT Y APE
Sbjct: 272 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPE 325
Query: 246 YAM---TGQLTLKSDVYSFGVVLLEIITGRKAIDNTR---------AAGEHNLV--AWA 290
+ T D +S GV+L ++G R +G++N + WA
Sbjct: 326 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 384
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 98
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 99 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 145
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 146 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 197
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 245
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGL---------QGNRE 112
+E+ ++F ++G G FG V ++++T ++ A+K L++ + + R+
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 113 FLV--EVLMLSLLHHP-----NLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKK 165
LV + ++ LH+ +L ++ Y GD L L ED L P D
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTL------LSKFEDKL---PEDMA 193
Query: 166 RLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPV 225
R + M +A + L Y+H RD+K N+LL H +L+DFG + L
Sbjct: 194 RF-YIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFG-SCLKMN 242
Query: 226 GDKTHVSTRVMGTYGYCAPEY--AM---TGQLTLKSDVYSFGVVLLEIITGR 272
D T S+ +GT Y +PE AM G+ + D +S GV + E++ G
Sbjct: 243 DDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 20/201 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G G FG R + T ++VA+K ++R G + E++ L HPN+V
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIER-GAAIDENVQREIINHRSLRHPNIVRFKEVIL 86
Query: 137 DGDQRLLVYEYMPLGSLEDHLHD---LPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
++ EY G L + + + D+ R + + G+ Y H
Sbjct: 87 TPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLL-------SGVSYCHSMQ--- 136
Query: 194 VIYRDLKCSNILLGEGYHP--KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
+ +RDLK N LL P K+ DFG +K + + + +GT Y APE + +
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLRQE 193
Query: 252 LTLK-SDVYSFGVVLLEIITG 271
K +DV+S GV L ++ G
Sbjct: 194 YDGKIADVWSCGVTLYVMLVG 214
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 43/215 (20%)
Query: 77 LGEGGFGRV---YKGRLESTNQVVAIKQLDR--NGLQGNREFLVEVLMLSLLHHPNLVNL 131
+G G +G V Y RL Q VA+K+L R L R E+ +L L H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARL---RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAG 178
+ + P S+ED L+++ + D + +
Sbjct: 93 LDV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-LVYQ 139
Query: 179 AAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
+GL+Y+H +I+RDLK SN+ + E ++ DFGLA+ +V+TR
Sbjct: 140 LLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR---- 192
Query: 239 YGYCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGR 272
Y APE + D++S G ++ E++ G+
Sbjct: 193 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 113/267 (42%), Gaps = 29/267 (10%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQL--DRNGLQGNREFLVEVLMLSLLHHPNLVNLIGY 134
LG G +G V K R + Q++A+K++ N + R + + + + P V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
+ E M SL+ + + + +IA K LE+LH K + V
Sbjct: 75 LFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 131
Query: 195 IYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQL-- 252
I+RD+K SN+L+ K+ DFG++ G + D G Y APE + +L
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGIS--GYLVDDVAKDIDA-GCKPYMAPE-RINPELNQ 187
Query: 253 ---TLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTLQ 309
++KSD++S G+ ++E+ R D +W P F+ ++ + P L
Sbjct: 188 KGYSVKSDIWSLGITMIELAILRFPYD-----------SWGTP-FQQLKQVVEEPSPQLP 235
Query: 310 GQYPVRGLYQALAVAAMCVQEQPNMRP 336
+ + + + C+++ RP
Sbjct: 236 AD---KFSAEFVDFTSQCLKKNSKERP 259
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 20/201 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G G FG R + +N++VA+K ++R G + E++ L HPN+V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIAANVKREIINHRSLRHPNIVRFKEVIL 85
Query: 137 DGDQRLLVYEYMPLGSLEDHLHD---LPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
+V EY G L + + + D+ R + + G+ Y H
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYCHAMQ--- 135
Query: 194 VIYRDLKCSNILLGEGYHP--KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
V +RDLK N LL P K+ DFG +K + + +GT Y APE + +
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLKKE 192
Query: 252 LTLK-SDVYSFGVVLLEIITG 271
K +DV+S GV L ++ G
Sbjct: 193 YDGKVADVWSCGVTLYVMLVG 213
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 95 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 141
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 94 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 140
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 108 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 154
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 206
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 254
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 109 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 155
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 207
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 96 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 142
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 96 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 142
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G G FG V++ + + T A+K++ + + E++ + L P +V L G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVR 120
Query: 137 DGDQRLLVYEYM---PLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
+G + E + LG L + LP D+ + A +GLEYLH +
Sbjct: 121 EGPWVNIFMELLEGGSLGQLIKQMGCLPEDRA-------LYYLGQALEGLEYLHTRR--- 170
Query: 194 VIYRDLKCSNILLG-EGYHPKLSDFGLA-KLGP--VGDKTHVSTRVMGTYGYCAPEYAMT 249
+++ D+K N+LL +G L DFG A L P +G + GT + APE M
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 250 GQLTLKSDVYSFGVVLLEIITG 271
K D++S ++L ++ G
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 94 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 140
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 96 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 142
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 18/206 (8%)
Query: 76 LLGEGGFGRVYKGRLESTN---QVVAIKQLDRNGLQGNREFLV--EVLMLSLLHHPNLVN 130
LLGEG +G+V K L+S + V I + + N E V E+ +L L H N++
Sbjct: 12 LLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 131 LIG--YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
L+ Y + + +V EY G +++ L +P +KR GLEYLH
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVP--EKRFPVCQAHGYFCQLIDGLEYLHS 127
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK-LGPVGDKTHVSTRVMGTYGYCAPEYA 247
+ ++++D+K N+LL G K+S G+A+ L P T G+ + PE A
Sbjct: 128 QG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS-QGSPAFQPPEIA 183
Query: 248 --MTGQLTLKSDVYSFGVVLLEIITG 271
+ K D++S GV L I TG
Sbjct: 184 NGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 39/234 (16%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVL 118
+ + V + ++ +G G +G V + +A+K+L R + + R + E+
Sbjct: 44 KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-ELR 102
Query: 119 MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKK 165
+L + H N++ L+ + P SLE+ L+++ +K
Sbjct: 103 LLKHMKHENVIGLLDV------------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQK 150
Query: 166 RLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPV 225
D + I +GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+
Sbjct: 151 LTDDHVQFLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 206
Query: 226 GDKTHVSTRVMGTYGYCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNT 278
+V+TR Y APE + + D++S G ++ E++TGR T
Sbjct: 207 EMTGYVATR-----WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGT 255
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G G FG V++ + + T A+K++ + + E++ + L P +V L G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVR 136
Query: 137 DGDQRLLVYEYM---PLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
+G + E + LG L + LP D+ + A +GLEYLH +
Sbjct: 137 EGPWVNIFMELLEGGSLGQLIKQMGCLPEDRA-------LYYLGQALEGLEYLHTRR--- 186
Query: 194 VIYRDLKCSNILLG-EGYHPKLSDFGLAK-LGP--VGDKTHVSTRVMGTYGYCAPEYAMT 249
+++ D+K N+LL +G L DFG A L P +G + GT + APE M
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 250 GQLTLKSDVYSFGVVLLEIITG 271
K D++S ++L ++ G
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 100 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 146
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 147 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 198
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 96 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 142
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 194
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 91 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 137
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 91 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 137
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 187
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 44/279 (15%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF------LV 115
+E + ++ LLG GGFG VY G S N VAIK ++++ + E +
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 116 EVLMLSLLH--HPNLVNLIGYCADGDQRLLVYEYM-PLGSLEDHLHDLPPDKKRLDWTTR 172
EV++L + ++ L+ + D +L+ E M P+ L D + + ++ L +
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF 120
Query: 173 MRIAAGAAKGLEYLHDKANPPVIYRDLKCSNIL--LGEGYHPKLSDFGLAKLGPVGDKTH 230
++ LE + N V++RD+K NIL L G KL DFG L K
Sbjct: 121 WQV-------LEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDT 168
Query: 231 VSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITGRKAIDN------------ 277
V T GT Y PE+ + +S V+S G++L +++ G ++
Sbjct: 169 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 228
Query: 278 TRAAGE-HNLVAWA-------RPLFKDRRKFSQMADPTL 308
R + E +L+ W RP F++ + M D L
Sbjct: 229 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 267
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 100 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 146
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 147 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 198
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 91 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 137
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 94 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 140
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 101 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 147
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 87
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 88 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 134
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 135 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 186
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 234
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ ++ NRE + + L H N+V L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 82
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ +VY + L + + ++ + R T + + L Y+H
Sbjct: 83 YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM- 248
+ +RD+K N+LL + KL DFG AK G+ + + + Y APE
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFG 196
Query: 249 TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 101 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 147
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 187
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 112 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 158
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 159 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----W 210
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 85 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 131
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ V+TR
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 183
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 91 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 137
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 43/215 (20%)
Query: 77 LGEGGFGRV---YKGRLESTNQVVAIKQLDR--NGLQGNREFLVEVLMLSLLHHPNLVNL 131
+G G +G V Y RL Q VA+K+L R L R E+ +L L H N++ L
Sbjct: 28 VGSGAYGSVCSAYDARL---RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAG 178
+ + P S+ED L+++ + D + +
Sbjct: 85 LDV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQ 131
Query: 179 AAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
+GL+Y+H +I+RDLK SN+ + E ++ DFGLA+ +V+TR
Sbjct: 132 LLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR---- 184
Query: 239 YGYCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGR 272
Y APE + D++S G ++ E++ G+
Sbjct: 185 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 86 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 132
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 133 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 184
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 86
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 87 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 133
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 134 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 185
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 233
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 85 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 131
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 86 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 132
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 133 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 184
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 94 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 140
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 95 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 141
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 95 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 141
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 45/231 (19%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 109 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 155
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMG--- 237
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ H + G
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMXGXVA 204
Query: 238 TYGYCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
T Y APE + D++S G ++ E++TGR T + L+
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 109 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 155
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 207
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 108 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 154
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 206
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 254
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 34/212 (16%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLD--RNGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
L+G+G FG+VY GR VAI+ +D R+ + F EV+ H N+V +G
Sbjct: 40 LIGKGRFGQVYHGRWHGE---VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
C ++ +L + D K LD +IA KG+ YLH K
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAKG--- 150
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPV------GDKTHVSTRVMGTYGYCAPEYA 247
++++DLK N+ G ++DFGL + V DK + G + APE
Sbjct: 151 ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQN---GWLCHLAPE-- 204
Query: 248 MTGQL-----------TLKSDVYSFGVVLLEI 268
+ QL + SDV++ G + E+
Sbjct: 205 IIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGL + +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----W 187
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 29/230 (12%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S I TFT V K ++ +G G G V + VAIK+L R N
Sbjct: 12 SVEIGDSTFT------VLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQT 65
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLL-----VYEYMPLGSLE-DHLHDLP 161
R + E++++ +++H N++ L+ Q+ L VY M L + +
Sbjct: 66 HAKRAYR-ELVLMKVVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLSQVIQME 122
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLV-----GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 222 LGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
G ++ V+ Y Y APE + D++S GV++ E+I G
Sbjct: 175 TA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 95 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 141
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 112 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 158
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 159 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 210
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 43/215 (20%)
Query: 77 LGEGGFGRV---YKGRLESTNQVVAIKQLDR--NGLQGNREFLVEVLMLSLLHHPNLVNL 131
+G G +G V Y RL Q VA+K+L R L R E+ +L L H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARL---RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 132 IGYCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAG 178
+ + P S+ED L+++ + D + +
Sbjct: 93 LDV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQ 139
Query: 179 AAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGT 238
+GL+Y+H +I+RDLK SN+ + E ++ DFGLA+ +V+TR
Sbjct: 140 LLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR---- 192
Query: 239 YGYCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGR 272
Y APE + D++S G ++ E++ G+
Sbjct: 193 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 20/201 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G G FG R + +N++VA+K ++R G + + E++ L HPN+V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 137 DGDQRLLVYEYMPLGSLEDHLHD---LPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
+V EY G L + + + D+ R + + G+ Y H
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYCHAMQ--- 135
Query: 194 VIYRDLKCSNILLGEGYHP--KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
V +RDLK N LL P K+ FG +K + + +GT Y APE + +
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLKKE 192
Query: 252 LTLK-SDVYSFGVVLLEIITG 271
K +DV+S GV L ++ G
Sbjct: 193 YDGKVADVWSCGVTLYVMLVG 213
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRV---YKGRLESTNQVVAIKQLDR--- 104
S I TFT V K ++ +G G G V Y LE VAIK+L R
Sbjct: 12 SVEIGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAILERN---VAIKKLSRPFQ 62
Query: 105 NGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLL-----VYEYMPLGSLE-DHLH 158
N R + E++++ +++H N++ L+ Q+ L VY M L +
Sbjct: 63 NQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLSQVI 119
Query: 159 DLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFG 218
+ D +R+ + + G+++LH +I+RDLK SNI++ K+ DFG
Sbjct: 120 QMELDHERMSYLLYQMLV-----GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG 171
Query: 219 LAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
LA+ G ++ V+ Y Y APE + D++S GV++ E+I G
Sbjct: 172 LARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 61 FRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLML 120
F++L +TK L E G ++KGR + + VV + ++ + +R+F E L
Sbjct: 9 FKQLNFLTK-------LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRL 61
Query: 121 SLLHHPNLVNLIGYCAD--GDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG 178
+ HPN++ ++G C L+ + P GSL + LH+ +D + ++ A
Sbjct: 62 RIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHE--GTNFVVDQSQAVKFALD 119
Query: 179 AAKGLEYLHDKANPPVIYRD-LKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMG 237
A+G +LH P+I R L ++ + E ++S V
Sbjct: 120 XARGXAFLHTLE--PLIPRHALNSRSVXIDEDXTARIS------------XADVKFSFQS 165
Query: 238 TYGYCAPEYAMTGQLTLK--------SDVYSFGVVLLEIIT 270
AP + L K +D +SF V+L E++T
Sbjct: 166 PGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVT 206
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ ++ NRE + + L H N+V L +
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 110
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ VY + L + + ++ + R T + + L Y+H
Sbjct: 111 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 170
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDK--THVSTRVMGTYGYCAPEYA 247
+ +RD+K N+LL + KL DFG AK G+ +++ +R Y APE
Sbjct: 171 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELI 222
Query: 248 M-TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 223 FGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ ++ NRE + + L H N+V L +
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 116
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ VY + L + + ++ + R T + + L Y+H
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 176
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDK--THVSTRVMGTYGYCAPEYA 247
+ +RD+K N+LL + KL DFG AK G+ +++ +R Y APE
Sbjct: 177 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELI 228
Query: 248 M-TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 20/201 (9%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G G FG R + +N++VA+K ++R G + + E++ L HPN+V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 137 DGDQRLLVYEYMPLGSLEDHLHD---LPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
+V EY G L + + + D+ R + + G+ Y H
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYCHAMQ--- 135
Query: 194 VIYRDLKCSNILLGEGYHP--KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
V +RDLK N LL P K+ FG +K + + +GT Y APE + +
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ---PKDTVGTPAYIAPEVLLKKE 192
Query: 252 LTLK-SDVYSFGVVLLEIITG 271
K +DV+S GV L ++ G
Sbjct: 193 YDGKVADVWSCGVTLYVMLVG 213
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 45/231 (19%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMG--- 237
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGXVA 184
Query: 238 TYGYCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
T Y APE + D++S G ++ E++TGR T + L+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ ++ NRE + + L H N+V L +
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 118
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ VY + L + + ++ + R T + + L Y+H
Sbjct: 119 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 178
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDK--THVSTRVMGTYGYCAPEYA 247
+ +RD+K N+LL + KL DFG AK G+ +++ +R Y APE
Sbjct: 179 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELI 230
Query: 248 M-TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 231 FGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ ++ NRE + + L H N+V L +
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 95
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ VY + L + + ++ + R T + + L Y+H
Sbjct: 96 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 155
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDK--THVSTRVMGTYGYCAPEYA 247
+ +RD+K N+LL + KL DFG AK G+ +++ +R Y APE
Sbjct: 156 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELI 207
Query: 248 M-TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 208 FGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ ++ NRE + + L H N+V L +
Sbjct: 65 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 120
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ VY + L + + ++ + R T + + L Y+H
Sbjct: 121 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 180
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDK--THVSTRVMGTYGYCAPEYA 247
+ +RD+K N+LL + KL DFG AK G+ +++ +R Y APE
Sbjct: 181 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELI 232
Query: 248 M-TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 233 FGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ ++ NRE + + L H N+V L +
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 87
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ VY + L + + ++ + R T + + L Y+H
Sbjct: 88 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 147
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDK--THVSTRVMGTYGYCAPEYA 247
+ +RD+K N+LL + KL DFG AK G+ +++ +R Y APE
Sbjct: 148 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELI 199
Query: 248 M-TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 200 FGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ ++ NRE + + L H N+V L +
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 161
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ VY + L + + ++ + R T + + L Y+H
Sbjct: 162 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 221
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDK--THVSTRVMGTYGYCAPEYA 247
+ +RD+K N+LL + KL DFG AK G+ +++ +R Y APE
Sbjct: 222 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELI 273
Query: 248 M-TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 274 FGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ ++ NRE + + L H N+V L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 82
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ VY + L + + ++ + R T + + L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDK--THVSTRVMGTYGYCAPEYA 247
+ +RD+K N+LL + KL DFG AK G+ +++ +R Y APE
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELI 194
Query: 248 M-TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L + + + R + E+ +L + H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 101 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 147
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 16/205 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA 136
+G G + + ++TN A+K +D++ E +E+L L HPN++ L
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEE--IEIL-LRYGQHPNIITLKDVYD 86
Query: 137 DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIY 196
DG +V E G L D + +K + K +EYLH + V++
Sbjct: 87 DGKYVYVVTELXKGGELLDKI----LRQKFFSEREASAVLFTITKTVEYLHAQG---VVH 139
Query: 197 RDLKCSNIL-LGEGYHP---KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQL 252
RDLK SNIL + E +P ++ DFG AK + + + T + APE
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAK--QLRAENGLLXTPCYTANFVAPEVLERQGY 197
Query: 253 TLKSDVYSFGVVLLEIITGRKAIDN 277
D++S GV+L +TG N
Sbjct: 198 DAACDIWSLGVLLYTXLTGYTPFAN 222
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL----- 131
LG GG G V+ ++ VAIK++ Q + L E+ ++ L H N+V +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 132 ---------IGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKG 182
+G + + +V EYM E L ++ L+ R+ + +G
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYM-----ETDLANVLEQGPLLEEHARLFMYQ-LLRG 132
Query: 183 LEYLHDKANPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGP--VGDKTHVSTRVMGTY 239
L+Y+H AN V++RDLK +N+ + E K+ DFGLA++ K H+S ++ T
Sbjct: 133 LKYIH-SAN--VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TK 188
Query: 240 GYCAPEYAMT-GQLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNL 286
Y +P ++ T D+++ G + E++TG+ T AG H L
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK-----TLFAGAHEL 231
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ D+GLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----W 187
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ ++ NRE + + L H N+V L +
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 90
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ VY + L + + ++ + R T + + L Y+H
Sbjct: 91 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 150
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM- 248
+ +RD+K N+LL + KL DFG AK G+ + + + Y APE
Sbjct: 151 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFG 204
Query: 249 TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 205 ATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ ++ NRE + + L H N+V L +
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 101
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ VY + L + + ++ + R T + + L Y+H
Sbjct: 102 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 161
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM- 248
+ +RD+K N+LL + KL DFG AK G+ + + + Y APE
Sbjct: 162 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFG 215
Query: 249 TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 216 ATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ ++ NRE + + L H N+V L +
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 116
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ VY + L + + ++ + R T + + L Y+H
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 176
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM- 248
+ +RD+K N+LL + KL DFG AK G+ + + + Y APE
Sbjct: 177 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFG 230
Query: 249 TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 231 ATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ ++ NRE + + L H N+V L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 82
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ VY + L + + ++ + R T + + L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM- 248
+ +RD+K N+LL + KL DFG AK G+ + + + Y APE
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFG 196
Query: 249 TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ ++ NRE + + L H N+V L +
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 94
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ VY + L + + ++ + R T + + L Y+H
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 154
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM- 248
+ +RD+K N+LL + KL DFG AK G+ + + + Y APE
Sbjct: 155 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFG 208
Query: 249 TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ ++ NRE + + L H N+V L +
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 94
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ VY + L + + ++ + R T + + L Y+H
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 154
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM- 248
+ +RD+K N+LL + KL DFG AK G+ + + + Y APE
Sbjct: 155 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFG 208
Query: 249 TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ ++ NRE + + L H N+V L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 82
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ VY + L + + ++ + R T + + L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM- 248
+ +RD+K N+LL + KL DFG AK G+ + + + Y APE
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFG 196
Query: 249 TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 30/260 (11%)
Query: 26 IPSTSEKL--KVNSTVDVKKEASKDGGSDHIAAHTFTFRELAAVTKNFRADCLLGEGGFG 83
+P S L K+NS ++ D + +A +E + ++ LLG GGFG
Sbjct: 15 VPRGSHMLLSKINSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFG 70
Query: 84 RVYKGRLESTNQVVAIKQLDRNGLQGNREF------LVEVLMLSLLH--HPNLVNLIGYC 135
VY G S N VAIK ++++ + E +EV++L + ++ L+ +
Sbjct: 71 SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 130
Query: 136 ADGDQRLLVYEY-MPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
D +L+ E P+ L D + + ++ L + ++ LE + N V
Sbjct: 131 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-------LEAVRHCHNCGV 183
Query: 195 IYRDLKCSNIL--LGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQL 252
++RD+K NIL L G KL DFG L K V T GT Y PE+ +
Sbjct: 184 LHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 238
Query: 253 TLKS-DVYSFGVVLLEIITG 271
+S V+S G++L +++ G
Sbjct: 239 HGRSAAVWSLGILLYDMVCG 258
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 118/282 (41%), Gaps = 33/282 (11%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S +A TFT V K ++ +G G G V VA+K+L R N
Sbjct: 10 SVQVADSTFT------VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQT 63
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLL-----VYEYMPL--GSLEDHLHDL 160
R + E+++L ++H N+++L+ Q+ L VY M L +L +H +
Sbjct: 64 HAKRAYR-ELVLLKCVNHKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLCQVIH-M 119
Query: 161 PPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLA 220
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA
Sbjct: 120 ELDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 171
Query: 221 KLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTRA 280
+ + T + T Y APE + D++S G ++ E++ G T
Sbjct: 172 R---TASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDH 228
Query: 281 AGEHNLVAWARPLFKDRRKFSQMADPTLQGQYPVRGLYQALA 322
+ N V L +F PT++ R Y +A
Sbjct: 229 IDQWNKV--IEQLGTPSAEFMAALQPTVRNYVENRPAYPGIA 268
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ ++ NRE + + L H N+V L +
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 83
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ VY + L + + ++ + R T + + L Y+H
Sbjct: 84 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 143
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM- 248
+ +RD+K N+LL + KL DFG AK G+ + + + Y APE
Sbjct: 144 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFG 197
Query: 249 TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 198 ATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 48/307 (15%)
Query: 34 KVNSTVDVKKEASKDGGSDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLEST 93
K+NS ++ D + +A +E + ++ LLG GGFG VY G S
Sbjct: 6 KINSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSD 61
Query: 94 NQVVAIKQLDRNGLQGNREF------LVEVLMLSLLH--HPNLVNLIGYCADGDQRLLVY 145
N VAIK ++++ + E +EV++L + ++ L+ + D +L+
Sbjct: 62 NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 121
Query: 146 EY-MPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNI 204
E P+ L D + + ++ L + ++ LE + N V++RD+K NI
Sbjct: 122 ERPEPVQDLFDFITERGALQEELARSFFWQV-------LEAVRHCHNCGVLHRDIKDENI 174
Query: 205 L--LGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSF 261
L L G KL DFG L K V T GT Y PE+ + +S V+S
Sbjct: 175 LIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 262 GVVLLEIITGRKAIDN------------TRAAGE-HNLVAWA-------RPLFKDRRKFS 301
G++L +++ G ++ R + E +L+ W RP F++ +
Sbjct: 230 GILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 289
Query: 302 QMADPTL 308
M D L
Sbjct: 290 WMQDVLL 296
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 48/307 (15%)
Query: 34 KVNSTVDVKKEASKDGGSDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLEST 93
K+NS ++ D + +A +E + ++ LLG GGFG VY G S
Sbjct: 5 KINSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSD 60
Query: 94 NQVVAIKQLDRNGLQGNREF------LVEVLMLSLLH--HPNLVNLIGYCADGDQRLLVY 145
N VAIK ++++ + E +EV++L + ++ L+ + D +L+
Sbjct: 61 NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 120
Query: 146 EY-MPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNI 204
E P+ L D + + ++ L + ++ LE + N V++RD+K NI
Sbjct: 121 ERPEPVQDLFDFITERGALQEELARSFFWQV-------LEAVRHCHNCGVLHRDIKDENI 173
Query: 205 L--LGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSF 261
L L G KL DFG L K V T GT Y PE+ + +S V+S
Sbjct: 174 LIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228
Query: 262 GVVLLEIITGRKAIDN------------TRAAGE-HNLVAWA-------RPLFKDRRKFS 301
G++L +++ G ++ R + E +L+ W RP F++ +
Sbjct: 229 GILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 288
Query: 302 QMADPTL 308
M D L
Sbjct: 289 WMQDVLL 295
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ + NRE + + L H N+V L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI----MRKLDHCNIVRLRYFF 82
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ VY + L + + ++ + R T + + L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDK--THVSTRVMGTYGYCAPEYA 247
+ +RD+K N+LL + KL DFG AK G+ +++ +R Y APE
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELI 194
Query: 248 M-TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ ++ NRE + + L H N+V L +
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFF 86
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ VY + L + + ++ + R T + + L Y+H
Sbjct: 87 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 146
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM- 248
+ +RD+K N+LL + KL DFG AK G+ + + + Y APE
Sbjct: 147 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFG 200
Query: 249 TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 201 ATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 109/219 (49%), Gaps = 35/219 (15%)
Query: 75 CLLGEGGFGRVY--KGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLI 132
C +G G +G VY K + ++ A+KQ++ G+ + E+ +L L HPN+++L
Sbjct: 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSA--CREIALLRELKHPNVISLQ 84
Query: 133 G-YCADGDQRL-LVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAK--------G 182
+ + D+++ L+++Y + D H + + +++ G K G
Sbjct: 85 KVFLSHADRKVWLLFDY----AEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG 140
Query: 183 LEYLHDKANPPVIYRDLKCSNIL-LGEGYHP---KLSDFGLAK-----LGPVGDKTHVST 233
+ YLH AN V++RDLK +NIL +GEG K++D G A+ L P+ D
Sbjct: 141 IHYLH--AN-WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD----LD 193
Query: 234 RVMGTYGYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITG 271
V+ T+ Y APE + + K+ D+++ G + E++T
Sbjct: 194 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 48/307 (15%)
Query: 34 KVNSTVDVKKEASKDGGSDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLEST 93
K+NS ++ D + +A +E + ++ LLG GGFG VY G S
Sbjct: 5 KINSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSD 60
Query: 94 NQVVAIKQLDRNGLQGNREF------LVEVLMLSLLH--HPNLVNLIGYCADGDQRLLVY 145
N VAIK ++++ + E +EV++L + ++ L+ + D +L+
Sbjct: 61 NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 120
Query: 146 EY-MPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNI 204
E P+ L D + + ++ L + ++ LE + N V++RD+K NI
Sbjct: 121 ERPEPVQDLFDFITERGALQEELARSFFWQV-------LEAVRHCHNCGVLHRDIKDENI 173
Query: 205 L--LGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSF 261
L L G KL DFG L K V T GT Y PE+ + +S V+S
Sbjct: 174 LIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228
Query: 262 GVVLLEIITGRKAIDN------------TRAAGE-HNLVAWA-------RPLFKDRRKFS 301
G++L +++ G ++ R + E +L+ W RP F++ +
Sbjct: 229 GILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 288
Query: 302 QMADPTL 308
M D L
Sbjct: 289 WMQDVLL 295
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 48/307 (15%)
Query: 34 KVNSTVDVKKEASKDGGSDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLEST 93
K+NS ++ D + +A +E + ++ LLG GGFG VY G S
Sbjct: 5 KINSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSD 60
Query: 94 NQVVAIKQLDRNGLQGNREF------LVEVLMLSLLH--HPNLVNLIGYCADGDQRLLVY 145
N VAIK ++++ + E +EV++L + ++ L+ + D +L+
Sbjct: 61 NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 120
Query: 146 EY-MPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNI 204
E P+ L D + + ++ L + ++ LE + N V++RD+K NI
Sbjct: 121 ERPEPVQDLFDFITERGALQEELARSFFWQV-------LEAVRHCHNCGVLHRDIKDENI 173
Query: 205 L--LGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSF 261
L L G KL DFG L K V T GT Y PE+ + +S V+S
Sbjct: 174 LIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228
Query: 262 GVVLLEIITGRKAIDN------------TRAAGE-HNLVAWA-------RPLFKDRRKFS 301
G++L +++ G ++ R + E +L+ W RP F++ +
Sbjct: 229 GILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 288
Query: 302 QMADPTL 308
M D L
Sbjct: 289 WMQDVLL 295
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 48/307 (15%)
Query: 34 KVNSTVDVKKEASKDGGSDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLEST 93
K+NS ++ D + +A +E + ++ LLG GGFG VY G S
Sbjct: 20 KINSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSD 75
Query: 94 NQVVAIKQLDRNGLQGNREF------LVEVLMLSLLH--HPNLVNLIGYCADGDQRLLVY 145
N VAIK ++++ + E +EV++L + ++ L+ + D +L+
Sbjct: 76 NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 135
Query: 146 EY-MPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNI 204
E P+ L D + + ++ L + ++ LE + N V++RD+K NI
Sbjct: 136 ERPEPVQDLFDFITERGALQEELARSFFWQV-------LEAVRHCHNCGVLHRDIKDENI 188
Query: 205 L--LGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSF 261
L L G KL DFG L K V T GT Y PE+ + +S V+S
Sbjct: 189 LIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 243
Query: 262 GVVLLEIITGRKAIDN------------TRAAGE-HNLVAWA-------RPLFKDRRKFS 301
G++L +++ G ++ R + E +L+ W RP F++ +
Sbjct: 244 GILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 303
Query: 302 QMADPTL 308
M D L
Sbjct: 304 WMQDVLL 310
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ + NRE + + L H N+V L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI----MRKLDHCNIVRLRYFF 82
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ VY + L + + ++ + R T + + L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDK--THVSTRVMGTYGYCAPEYA 247
+ +RD+K N+LL + KL DFG AK G+ +++ +R Y APE
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELI 194
Query: 248 M-TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 48/307 (15%)
Query: 34 KVNSTVDVKKEASKDGGSDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLEST 93
K+NS ++ D + +A +E + ++ LLG GGFG VY G S
Sbjct: 6 KINSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSD 61
Query: 94 NQVVAIKQLDRNGLQGNREF------LVEVLMLSLLH--HPNLVNLIGYCADGDQRLLVY 145
N VAIK ++++ + E +EV++L + ++ L+ + D +L+
Sbjct: 62 NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 121
Query: 146 EY-MPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNI 204
E P+ L D + + ++ L + ++ LE + N V++RD+K NI
Sbjct: 122 ERPEPVQDLFDFITERGALQEELARSFFWQV-------LEAVRHCHNCGVLHRDIKDENI 174
Query: 205 L--LGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSF 261
L L G KL DFG L K V T GT Y PE+ + +S V+S
Sbjct: 175 LIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 262 GVVLLEIITGRKAIDN------------TRAAGE-HNLVAWA-------RPLFKDRRKFS 301
G++L +++ G ++ R + E +L+ W RP F++ +
Sbjct: 230 GILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 289
Query: 302 QMADPTL 308
M D L
Sbjct: 290 WMQDVLL 296
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 14/200 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQG--NREFLVEVLMLSLLHHPNLVNLIGY 134
LG+G F V + ++ Q A K ++ L +++ E + LL HPN+V L
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
++ LV++ + G L + D ++ + + + LE ++ +
Sbjct: 99 ISEEGFHYLVFDLVTGGELFE-------DIVAREYYSEADASHCIHQILESVNHIHQHDI 151
Query: 195 IYRDLKCSNILLG---EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
++RDLK N+LL +G KL+DFGLA V + GT GY +PE
Sbjct: 152 VHRDLKPENLLLASKCKGAAVKLADFGLAI--EVQGEQQAWFGFAGTPGYLSPEVLRKDP 209
Query: 252 LTLKSDVYSFGVVLLEIITG 271
D+++ GV+L ++ G
Sbjct: 210 YGKPVDIWACGVILYILLVG 229
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 103/256 (40%), Gaps = 52/256 (20%)
Query: 64 LAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGL-QGN----REFLVEVL 118
L + K + +G+G +G V T + AIK +++N + Q N EV
Sbjct: 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVR 80
Query: 119 MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPD--------------- 163
++ LHHPN+ L D LV E G L D L+ D
Sbjct: 81 LMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQIC 140
Query: 164 -----------------KKRLDWTTRMRIAAGAAK----GLEYLHDKANPPVIYRDLKCS 202
++ LD+ R ++ + + L YLH++ + +RD+K
Sbjct: 141 PCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDIKPE 197
Query: 203 NILL--GEGYHPKLSDFGLAKLG---PVGDKTHVSTRVMGTYGYCAPEYAMTGQLTL--K 255
N L + + KL DFGL+K G+ ++T+ GT + APE T + K
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKA-GTPYFVAPEVLNTTNESYGPK 256
Query: 256 SDVYSFGVVLLEIITG 271
D +S GV+L ++ G
Sbjct: 257 CDAWSAGVLLHLLLMG 272
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 28/220 (12%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNG--------LQGNRE-FLVEVLM 119
+N+ +LG G V + + T + A+K +D G +Q RE L EV +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 120 LSLLH-HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG 178
L + HPN++ L LV++ M G L D+L +K L +I
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRA 132
Query: 179 AAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVSTRVMG 237
+ + LH K N +++RDLK NILL + + KL+DFG + +L P G+K V G
Sbjct: 133 LLEVICALH-KLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLR---EVCG 185
Query: 238 TYGYCAPEYAMTGQ------LTLKSDVYSFGVVLLEIITG 271
T Y APE + D++S GV++ ++ G
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ DF LA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----W 187
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 111/250 (44%), Gaps = 28/250 (11%)
Query: 34 KVNSTVDVKKEASKDGGSDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLEST 93
K+NS ++ D + +A +E + ++ LLG GGFG VY G S
Sbjct: 5 KINSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSD 60
Query: 94 NQVVAIKQLDRNGLQGNREF------LVEVLMLSLLH--HPNLVNLIGYCADGDQRLLVY 145
N VAIK ++++ + E +EV++L + ++ L+ + D +L+
Sbjct: 61 NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 120
Query: 146 EY-MPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNI 204
E P+ L D + + ++ L + ++ LE + N V++RD+K NI
Sbjct: 121 ERPEPVQDLFDFITERGALQEELARSFFWQV-------LEAVRHCHNCGVLHRDIKDENI 173
Query: 205 L--LGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSF 261
L L G KL DFG L K V T GT Y PE+ + +S V+S
Sbjct: 174 LIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228
Query: 262 GVVLLEIITG 271
G++L +++ G
Sbjct: 229 GILLYDMVCG 238
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 111/250 (44%), Gaps = 28/250 (11%)
Query: 34 KVNSTVDVKKEASKDGGSDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLEST 93
K+NS ++ D + +A +E + ++ LLG GGFG VY G S
Sbjct: 6 KINSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSD 61
Query: 94 NQVVAIKQLDRNGLQGNREF------LVEVLMLSLLH--HPNLVNLIGYCADGDQRLLVY 145
N VAIK ++++ + E +EV++L + ++ L+ + D +L+
Sbjct: 62 NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 121
Query: 146 EY-MPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNI 204
E P+ L D + + ++ L + ++ LE + N V++RD+K NI
Sbjct: 122 ERPEPVQDLFDFITERGALQEELARSFFWQV-------LEAVRHCHNCGVLHRDIKDENI 174
Query: 205 L--LGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSF 261
L L G KL DFG L K V T GT Y PE+ + +S V+S
Sbjct: 175 LIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 262 GVVLLEIITG 271
G++L +++ G
Sbjct: 230 GILLYDMVCG 239
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 111/250 (44%), Gaps = 28/250 (11%)
Query: 34 KVNSTVDVKKEASKDGGSDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLEST 93
K+NS ++ D + +A +E + ++ LLG GGFG VY G S
Sbjct: 20 KINSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSD 75
Query: 94 NQVVAIKQLDRNGLQGNREF------LVEVLMLSLLH--HPNLVNLIGYCADGDQRLLVY 145
N VAIK ++++ + E +EV++L + ++ L+ + D +L+
Sbjct: 76 NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 135
Query: 146 EY-MPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNI 204
E P+ L D + + ++ L + ++ LE + N V++RD+K NI
Sbjct: 136 ERPEPVQDLFDFITERGALQEELARSFFWQV-------LEAVRHCHNCGVLHRDIKDENI 188
Query: 205 L--LGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSF 261
L L G KL DFG L K V T GT Y PE+ + +S V+S
Sbjct: 189 LIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 243
Query: 262 GVVLLEIITG 271
G++L +++ G
Sbjct: 244 GILLYDMVCG 253
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 28/220 (12%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNG--------LQGNRE-FLVEVLM 119
+N+ +LG G V + + T + A+K +D G +Q RE L EV +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 120 LSLLH-HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG 178
L + HPN++ L LV++ M G L D+L +K L +I
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRA 119
Query: 179 AAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVSTRVMG 237
+ + LH K N +++RDLK NILL + + KL+DFG + +L P G+K V G
Sbjct: 120 LLEVICALH-KLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLR---EVCG 172
Query: 238 TYGYCAPEYAMTGQ------LTLKSDVYSFGVVLLEIITG 271
T Y APE + D++S GV++ ++ G
Sbjct: 173 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 111/250 (44%), Gaps = 28/250 (11%)
Query: 34 KVNSTVDVKKEASKDGGSDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLEST 93
K+NS ++ D + +A +E + ++ LLG GGFG VY G S
Sbjct: 6 KINSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSD 61
Query: 94 NQVVAIKQLDRNGLQGNREF------LVEVLMLSLLH--HPNLVNLIGYCADGDQRLLVY 145
N VAIK ++++ + E +EV++L + ++ L+ + D +L+
Sbjct: 62 NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 121
Query: 146 EY-MPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNI 204
E P+ L D + + ++ L + ++ LE + N V++RD+K NI
Sbjct: 122 ERPEPVQDLFDFITERGALQEELARSFFWQV-------LEAVRHCHNCGVLHRDIKDENI 174
Query: 205 L--LGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSF 261
L L G KL DFG L K V T GT Y PE+ + +S V+S
Sbjct: 175 LIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 262 GVVLLEIITG 271
G++L +++ G
Sbjct: 230 GILLYDMVCG 239
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 28/220 (12%)
Query: 69 KNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNG--------LQGNRE-FLVEVLM 119
+N+ +LG G V + + T + A+K +D G +Q RE L EV +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 120 LSLLH-HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAG 178
L + HPN++ L LV++ M G L D+L +K L +I
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRA 132
Query: 179 AAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLA-KLGPVGDKTHVSTRVMG 237
+ + LH K N +++RDLK NILL + + KL+DFG + +L P G+K V G
Sbjct: 133 LLEVICALH-KLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLR---SVCG 185
Query: 238 TYGYCAPEYAMTGQ------LTLKSDVYSFGVVLLEIITG 271
T Y APE + D++S GV++ ++ G
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 44/279 (15%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF------LV 115
+E + ++ LLG GGFG VY G S N VAIK ++++ + E +
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95
Query: 116 EVLMLSLLH--HPNLVNLIGYCADGDQRLLVYEY-MPLGSLEDHLHDLPPDKKRLDWTTR 172
EV++L + ++ L+ + D +L+ E P+ L D + + ++ L +
Sbjct: 96 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 155
Query: 173 MRIAAGAAKGLEYLHDKANPPVIYRDLKCSNIL--LGEGYHPKLSDFGLAKLGPVGDKTH 230
++ LE + N V++RD+K NIL L G KL DFG L K
Sbjct: 156 WQV-------LEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDT 203
Query: 231 VSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITGRKAIDN------------ 277
V T GT Y PE+ + +S V+S G++L +++ G ++
Sbjct: 204 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 263
Query: 278 TRAAGE-HNLVAWA-------RPLFKDRRKFSQMADPTL 308
R + E +L+ W RP F++ + M D L
Sbjct: 264 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 302
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGN-----REFLVEVLMLSLLHHPNLVN 130
++G+G F V + T Q A+K +D + + E + +L HP++V
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 131 LI-GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGA------AKGL 183
L+ Y +DG +V+E+M L + KR D A + + L
Sbjct: 91 LLETYSSDG-MLYMVFEFMDGADLCFEI------VKRADAGFVYSEAVASHYMRQILEAL 143
Query: 184 EYLHDKANPPVIYRDLKCSNILLG--EGYHP-KLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
Y HD +I+RD+K N+LL E P KL DFG+A +G+ V+ +GT
Sbjct: 144 RYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAI--QLGESGLVAGGRVGTPH 198
Query: 241 YCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
+ APE DV+ GV+L +++G
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 44/279 (15%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF------LV 115
+E + ++ LLG GGFG VY G S N VAIK ++++ + E +
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 116 EVLMLSLLH--HPNLVNLIGYCADGDQRLLVYEY-MPLGSLEDHLHDLPPDKKRLDWTTR 172
EV++L + ++ L+ + D +L+ E P+ L D + + ++ L +
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 173 MRIAAGAAKGLEYLHDKANPPVIYRDLKCSNIL--LGEGYHPKLSDFGLAKLGPVGDKTH 230
++ LE + N V++RD+K NIL L G KL DFG L K
Sbjct: 122 WQV-------LEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDT 169
Query: 231 VSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITGRKAIDN------------ 277
V T GT Y PE+ + +S V+S G++L +++ G ++
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 229
Query: 278 TRAAGE-HNLVAWA-------RPLFKDRRKFSQMADPTL 308
R + E +L+ W RP F++ + M D L
Sbjct: 230 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 268
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 44/279 (15%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF------LV 115
+E + ++ LLG GGFG VY G S N VAIK ++++ + E +
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 116 EVLMLSLLH--HPNLVNLIGYCADGDQRLLVYEY-MPLGSLEDHLHDLPPDKKRLDWTTR 172
EV++L + ++ L+ + D +L+ E P+ L D + + ++ L +
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 135
Query: 173 MRIAAGAAKGLEYLHDKANPPVIYRDLKCSNIL--LGEGYHPKLSDFGLAKLGPVGDKTH 230
++ LE + N V++RD+K NIL L G KL DFG L K
Sbjct: 136 WQV-------LEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDT 183
Query: 231 VSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITGRKAIDN------------ 277
V T GT Y PE+ + +S V+S G++L +++ G ++
Sbjct: 184 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 243
Query: 278 TRAAGE-HNLVAWA-------RPLFKDRRKFSQMADPTL 308
R + E +L+ W RP F++ + M D L
Sbjct: 244 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 282
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 44/279 (15%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF------LV 115
+E + ++ LLG GGFG VY G S N VAIK ++++ + E +
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 116 EVLMLSLLH--HPNLVNLIGYCADGDQRLLVYEY-MPLGSLEDHLHDLPPDKKRLDWTTR 172
EV++L + ++ L+ + D +L+ E P+ L D + + ++ L +
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 173 MRIAAGAAKGLEYLHDKANPPVIYRDLKCSNIL--LGEGYHPKLSDFGLAKLGPVGDKTH 230
++ LE + N V++RD+K NIL L G KL DFG L K
Sbjct: 122 WQV-------LEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDT 169
Query: 231 VSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITGRKAIDN------------ 277
V T GT Y PE+ + +S V+S G++L +++ G ++
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 229
Query: 278 TRAAGE-HNLVAWA-------RPLFKDRRKFSQMADPTL 308
R + E +L+ W RP F++ + M D L
Sbjct: 230 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 268
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 44/279 (15%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF------LV 115
+E + ++ LLG GGFG VY G S N VAIK ++++ + E +
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 116 EVLMLSLLH--HPNLVNLIGYCADGDQRLLVYEY-MPLGSLEDHLHDLPPDKKRLDWTTR 172
EV++L + ++ L+ + D +L+ E P+ L D + + ++ L +
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 120
Query: 173 MRIAAGAAKGLEYLHDKANPPVIYRDLKCSNIL--LGEGYHPKLSDFGLAKLGPVGDKTH 230
++ LE + N V++RD+K NIL L G KL DFG L K
Sbjct: 121 WQV-------LEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDT 168
Query: 231 VSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITGRKAIDN------------ 277
V T GT Y PE+ + +S V+S G++L +++ G ++
Sbjct: 169 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 228
Query: 278 TRAAGE-HNLVAWA-------RPLFKDRRKFSQMADPTL 308
R + E +L+ W RP F++ + M D L
Sbjct: 229 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 267
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 44/279 (15%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF------LV 115
+E + ++ LLG GGFG VY G S N VAIK ++++ + E +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 116 EVLMLSLLH--HPNLVNLIGYCADGDQRLLVYEY-MPLGSLEDHLHDLPPDKKRLDWTTR 172
EV++L + ++ L+ + D +L+ E P+ L D + + ++ L +
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 173 MRIAAGAAKGLEYLHDKANPPVIYRDLKCSNIL--LGEGYHPKLSDFGLAKLGPVGDKTH 230
++ LE + N V++RD+K NIL L G KL DFG L K
Sbjct: 137 WQV-------LEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDT 184
Query: 231 VSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITGRKAIDN------------ 277
V T GT Y PE+ + +S V+S G++L +++ G ++
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 244
Query: 278 TRAAGE-HNLVAWA-------RPLFKDRRKFSQMADPTL 308
R + E +L+ W RP F++ + M D L
Sbjct: 245 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 283
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 44/279 (15%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF------LV 115
+E + ++ LLG GGFG VY G S N VAIK ++++ + E +
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 116 EVLMLSLLH--HPNLVNLIGYCADGDQRLLVYEY-MPLGSLEDHLHDLPPDKKRLDWTTR 172
EV++L + ++ L+ + D +L+ E P+ L D + + ++ L +
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 173 MRIAAGAAKGLEYLHDKANPPVIYRDLKCSNIL--LGEGYHPKLSDFGLAKLGPVGDKTH 230
++ LE + N V++RD+K NIL L G KL DFG L K
Sbjct: 122 WQV-------LEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDT 169
Query: 231 VSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITGRKAIDN------------ 277
V T GT Y PE+ + +S V+S G++L +++ G ++
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 229
Query: 278 TRAAGE-HNLVAWA-------RPLFKDRRKFSQMADPTL 308
R + E +L+ W RP F++ + M D L
Sbjct: 230 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 268
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 35/233 (15%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRV---YKGRLESTNQVVAIKQLDR--- 104
S I TFT V K ++ +G G G V Y LE VAIK+L R
Sbjct: 12 SVEIGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAILERN---VAIKKLSRPFQ 62
Query: 105 NGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLL-----VYEYMPLGSLE-DHLH 158
N R + E++++ +++H N++ L+ Q+ L VY M L +
Sbjct: 63 NQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLSQVI 119
Query: 159 DLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFG 218
+ D +R+ + + G+++LH +I+RDLK SNI++ K+ DFG
Sbjct: 120 QMELDHERMSYLLYQMLV-----GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG 171
Query: 219 LAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
LA+ G ++ V+ Y Y APE + D++S G ++ E+I G
Sbjct: 172 LARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 24/222 (10%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF------LV 115
+E + ++ LLG GGFG VY G S N VAIK ++++ + E +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 116 EVLMLSLLH--HPNLVNLIGYCADGDQRLLVYEY-MPLGSLEDHLHDLPPDKKRLDWTTR 172
EV++L + ++ L+ + D +L+ E P+ L D + + ++ L +
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 173 MRIAAGAAKGLEYLHDKANPPVIYRDLKCSNIL--LGEGYHPKLSDFGLAKLGPVGDKTH 230
++ LE + N V++RD+K NIL L G KL DFG L K
Sbjct: 137 WQV-------LEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDT 184
Query: 231 VSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITG 271
V T GT Y PE+ + +S V+S G++L +++ G
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 24/222 (10%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF------LV 115
+E + ++ LLG GGFG VY G S N VAIK ++++ + E +
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 116 EVLMLSLLH--HPNLVNLIGYCADGDQRLLVYEY-MPLGSLEDHLHDLPPDKKRLDWTTR 172
EV++L + ++ L+ + D +L+ E P+ L D + + ++ L +
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 135
Query: 173 MRIAAGAAKGLEYLHDKANPPVIYRDLKCSNIL--LGEGYHPKLSDFGLAKLGPVGDKTH 230
++ LE + N V++RD+K NIL L G KL DFG L K
Sbjct: 136 WQV-------LEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDT 183
Query: 231 VSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITG 271
V T GT Y PE+ + +S V+S G++L +++ G
Sbjct: 184 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 109/256 (42%), Gaps = 31/256 (12%)
Query: 42 KKEASKDGGSDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ 101
K + S +A TFT V K ++ +G G G V VA+K+
Sbjct: 3 KSKVDNQFYSVEVADSTFT------VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKK 56
Query: 102 LDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLL-----VYEYMPL--G 151
L R N R + E+++L ++H N+++L+ Q+ L VY M L
Sbjct: 57 LSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVFTP--QKTLEEFQDVYLVMELMDA 113
Query: 152 SLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYH 211
+L +H + D +R+ + + G+++LH +I+RDLK SNI++
Sbjct: 114 NLCQVIH-MELDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCT 164
Query: 212 PKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
K+ DFGLA+ + T + T Y APE + D++S G ++ E++ G
Sbjct: 165 LKILDFGLARTACTN---FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
Query: 272 RKAIDNTRAAGEHNLV 287
T + N V
Sbjct: 222 CVIFQGTDHIDQWNKV 237
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 24/222 (10%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF------LV 115
+E + ++ LLG GGFG VY G S N VAIK ++++ + E +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 116 EVLMLSLLH--HPNLVNLIGYCADGDQRLLVYEY-MPLGSLEDHLHDLPPDKKRLDWTTR 172
EV++L + ++ L+ + D +L+ E P+ L D + + ++ L +
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 173 MRIAAGAAKGLEYLHDKANPPVIYRDLKCSNIL--LGEGYHPKLSDFGLAKLGPVGDKTH 230
++ LE + N V++RD+K NIL L G KL DFG L K
Sbjct: 137 WQV-------LEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDT 184
Query: 231 VSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITG 271
V T GT Y PE+ + +S V+S G++L +++ G
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ FGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----W 187
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 35/233 (15%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRV---YKGRLESTNQVVAIKQLDR--- 104
S I TFT V K ++ +G G G V Y LE VAIK+L R
Sbjct: 12 SVEIGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAILERN---VAIKKLSRPFQ 62
Query: 105 NGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLL-----VYEYMPLGSLE-DHLH 158
N R + E++++ +++H N++ L+ Q+ L VY M L +
Sbjct: 63 NQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLSQVI 119
Query: 159 DLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFG 218
+ D +R+ + + G+++LH +I+RDLK SNI++ K+ DFG
Sbjct: 120 QMELDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG 171
Query: 219 LAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
LA+ G ++ V+ Y Y APE + D++S G ++ E+I G
Sbjct: 172 LARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ D GLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----W 187
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 38/219 (17%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFL--VEVLM-----LSLLHHPNL 128
+LG+G V++GR + T + AIK + N FL V+V M L L+H N+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFN------NISFLRPVDVQMREFEVLKKLNHKNI 69
Query: 129 VNLIGYCADGDQR--LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYL 186
V L + R +L+ E+ P GSL L + P + L + + + G+ +L
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEE-PSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 187 HDKANPPVIYRDLKCSNIL--LGEGYHP--KLSDFGLAKLGPVGDKTHVSTRVMGTYGYC 242
+ +++R++K NI+ +GE KL+DFG A+ D+ VS + GT Y
Sbjct: 129 RENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR-ELEDDEQFVS--LYGTEEYL 182
Query: 243 APEYAMTGQLTLKS----------DVYSFGVVLLEIITG 271
P+ M + L+ D++S GV TG
Sbjct: 183 HPD--MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 44/279 (15%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF------LV 115
+E + ++ LLG GGFG VY G S N VAIK ++++ + E +
Sbjct: 24 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 83
Query: 116 EVLMLSLLH--HPNLVNLIGYCADGDQRLLVYEY-MPLGSLEDHLHDLPPDKKRLDWTTR 172
EV++L + ++ L+ + D +L+ E P+ L D + + ++ L +
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 143
Query: 173 MRIAAGAAKGLEYLHDKANPPVIYRDLKCSNIL--LGEGYHPKLSDFGLAKLGPVGDKTH 230
++ LE + N V++RD+K NIL L G KL DFG L K
Sbjct: 144 WQV-------LEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDT 191
Query: 231 VSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITGRKAIDN------------ 277
V T GT Y PE+ + +S V+S G++L +++ G ++
Sbjct: 192 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 251
Query: 278 TRAAGE-HNLVAWA-------RPLFKDRRKFSQMADPTL 308
R + E +L+ W RP F++ + M D L
Sbjct: 252 QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 290
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 17/204 (8%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL-IGY 134
++G G FG VY+ +L + ++VAIK++ + NRE + + L H N+V L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI----MRKLDHCNIVRLRYFF 82
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAA----GAAKGLEYLHDKA 190
+ G+++ VY + L + ++ + R T + + L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 191 NPPVIYRDLKCSNILLG-EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM- 248
+ +RD+K N+LL + KL DFG AK G+ + + + Y APE
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFG 196
Query: 249 TGQLTLKSDVYSFGVVLLEIITGR 272
T DV+S G VL E++ G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ D GLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----W 187
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 118/278 (42%), Gaps = 44/278 (15%)
Query: 63 ELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF------LVE 116
E + ++ LLG GGFG VY G S N VAIK ++++ + E +E
Sbjct: 1 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 60
Query: 117 VLMLSLLH--HPNLVNLIGYCADGDQRLLVYEY-MPLGSLEDHLHDLPPDKKRLDWTTRM 173
V++L + ++ L+ + D +L+ E P+ L D + + ++ L +
Sbjct: 61 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 120
Query: 174 RIAAGAAKGLEYLHDKANPPVIYRDLKCSNIL--LGEGYHPKLSDFGLAKLGPVGDKTHV 231
++ LE + N V++RD+K NIL L G KL DFG L K V
Sbjct: 121 QV-------LEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDTV 168
Query: 232 STRVMGTYGYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITGRKAIDN------------T 278
T GT Y PE+ + +S V+S G++L +++ G ++
Sbjct: 169 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 228
Query: 279 RAAGE-HNLVAWA-------RPLFKDRRKFSQMADPTL 308
R + E +L+ W RP F++ + M D L
Sbjct: 229 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 266
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQG--NREFLVEVLMLSLLHHPNLVNLIGY 134
LG+G F V + T Q A K ++ L +++ E + LL HPN+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
++ LV++ + G L + D ++ + + + LE ++ +
Sbjct: 72 ISEEGFHYLVFDLVTGGELFE-------DIVAREYYSEADASHCIQQILESVNHCHLNGI 124
Query: 195 IYRDLKCSNILLG---EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
++RDLK N+LL +G KL+DFGLA + GD+ GT GY +PE
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYLSPEVLRKDP 182
Query: 252 LTLKSDVYSFGVVLLEIITG 271
D+++ GV+L ++ G
Sbjct: 183 YGKPVDMWACGVILYILLVG 202
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 29/230 (12%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S I TFT V K ++ +G G G V + VAIK+L R N
Sbjct: 12 SVEIGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGY------CADGDQRLLVYEYMPLGSLEDHLHDLP 161
R + E++++ ++H N++ L+ + +V E M + +L
Sbjct: 66 HAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL- 123
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA+
Sbjct: 124 -DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 222 LGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
G ++ V+ Y Y APE + D++S G ++ E+I G
Sbjct: 175 TA--GTSFMMTPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 114/268 (42%), Gaps = 31/268 (11%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSL--LHHPNLVNLIG- 133
LG G +G V K R + Q+ A+K++ ++ L+ L +S + P V G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
+GD + + + SL+ + + + +IA K LE+LH K +
Sbjct: 102 LFREGD--VWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 157
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQL- 252
VI+RD+K SN+L+ K DFG++ G + D G Y APE + +L
Sbjct: 158 VIHRDVKPSNVLINALGQVKXCDFGIS--GYLVDDVAKDIDA-GCKPYXAPE-RINPELN 213
Query: 253 ----TLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFSQMADPTL 308
++KSD++S G+ +E+ R D +W P F+ ++ + P L
Sbjct: 214 QKGYSVKSDIWSLGITXIELAILRFPYD-----------SWGTP-FQQLKQVVEEPSPQL 261
Query: 309 QGQYPVRGLYQALAVAAMCVQEQPNMRP 336
+ + + + C+++ RP
Sbjct: 262 PAD---KFSAEFVDFTSQCLKKNSKERP 286
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 39/228 (17%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G +G V T VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 134 YCADGDQRLLVYEYMPLGSLEDH-------------LHDLPPDKKRLDWTTRMRIAAGAA 180
+ P SLE+ L+++ +K D + I
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 135
Query: 181 KGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYG 240
+GL+Y+H + +I+RDLK SN+ + E K+ D GLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----W 187
Query: 241 YCAPEYAMTG-QLTLKSDVYSFGVVLLEIITGRKAIDNTRAAGEHNLV 287
Y APE + D++S G ++ E++TGR T + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 35/233 (15%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRV---YKGRLESTNQVVAIKQLDR--- 104
S I TFT V K ++ +G G G V Y LE VAIK+L R
Sbjct: 12 SVEIGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAILERN---VAIKKLSRPFQ 62
Query: 105 NGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLL-----VYEYMPLGSLE-DHLH 158
N R + E++++ ++H N++ L+ Q+ L VY M L +
Sbjct: 63 NQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLSQVI 119
Query: 159 DLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFG 218
+ D +R+ + + G+++LH +I+RDLK SNI++ K+ DFG
Sbjct: 120 QMELDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG 171
Query: 219 LAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
LA+ G ++ V+ Y Y APE + D++S G ++ E+I G
Sbjct: 172 LARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 17/233 (7%)
Query: 45 ASKDGGSDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR 104
AS GG F + N+ LG+G F V + ++T A K ++
Sbjct: 5 ASMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINT 64
Query: 105 NGLQGNREFLV---EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLP 161
L R+F E + L HPN+V L + LV++ + G L +
Sbjct: 65 KKLSA-RDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE------ 117
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLG---EGYHPKLSDFG 218
D ++ + + + LE + + +++R+LK N+LL +G KL+DFG
Sbjct: 118 -DIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFG 176
Query: 219 LAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
LA + H GT GY +PE + D+++ GV+L ++ G
Sbjct: 177 LAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQG--NREFLVEVLMLSLLHHPNLVNLIGY 134
LG+G F V + T Q A K ++ L +++ E + LL HPN+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
++ LV++ + G L + D ++ + + + LE ++ +
Sbjct: 72 ISEEGFHYLVFDLVTGGELFE-------DIVAREYYSEADASHCIQQILESVNHCHLNGI 124
Query: 195 IYRDLKCSNILLG---EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
++RDLK N+LL +G KL+DFGLA + GD+ GT GY +PE
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYLSPEVLRKDP 182
Query: 252 LTLKSDVYSFGVVLLEIITG 271
D+++ GV+L ++ G
Sbjct: 183 YGKPVDMWACGVILYILLVG 202
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 44/274 (16%)
Query: 67 VTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF------LVEVLML 120
+ ++ LLG GGFG VY G S N VAIK ++++ + E +EV++L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 121 SLLH--HPNLVNLIGYCADGDQRLLVYEY-MPLGSLEDHLHDLPPDKKRLDWTTRMRIAA 177
+ ++ L+ + D +L+ E P+ L D + + ++ L + ++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-- 119
Query: 178 GAAKGLEYLHDKANPPVIYRDLKCSNIL--LGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
LE + N V++RD+K NIL L G KL DFG L K V T
Sbjct: 120 -----LEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDTVYTDF 169
Query: 236 MGTYGYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITGRKAIDN------------TRAAG 282
GT Y PE+ + +S V+S G++L +++ G ++ R +
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 229
Query: 283 E-HNLVAWA-------RPLFKDRRKFSQMADPTL 308
E +L+ W RP F++ + M D L
Sbjct: 230 ECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 263
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 67 VTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF------LVEVLML 120
+ ++ LLG GGFG VY G S N VAIK ++++ + E +EV++L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 121 SLLH--HPNLVNLIGYCADGDQRLLVYEY-MPLGSLEDHLHDLPPDKKRLDWTTRMRIAA 177
+ ++ L+ + D +L+ E P+ L D + + ++ L + ++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-- 119
Query: 178 GAAKGLEYLHDKANPPVIYRDLKCSNIL--LGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
LE + N V++RD+K NIL L G KL DFG L K V T
Sbjct: 120 -----LEAVRHCHNXGVLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDTVYTDF 169
Query: 236 MGTYGYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITG 271
GT Y PE+ + +S V+S G++L +++ G
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 44/274 (16%)
Query: 67 VTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREF------LVEVLML 120
+ ++ LLG GGFG VY G S N VAIK ++++ + E +EV++L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 121 SLLH--HPNLVNLIGYCADGDQRLLVYEY-MPLGSLEDHLHDLPPDKKRLDWTTRMRIAA 177
+ ++ L+ + D +L+ E P+ L D + + ++ L + ++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-- 119
Query: 178 GAAKGLEYLHDKANPPVIYRDLKCSNIL--LGEGYHPKLSDFGLAKLGPVGDKTHVSTRV 235
LE + N V++RD+K NIL L G KL DFG L K V T
Sbjct: 120 -----LEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDTVYTDF 169
Query: 236 MGTYGYCAPEYAMTGQLTLKS-DVYSFGVVLLEIITGRKAIDN------------TRAAG 282
GT Y PE+ + +S V+S G++L +++ G ++ R +
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSS 229
Query: 283 E-HNLVAWA-------RPLFKDRRKFSQMADPTL 308
E +L+ W RP F++ + M D L
Sbjct: 230 ECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 263
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 35/233 (15%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRV---YKGRLESTNQVVAIKQLDR--- 104
S I TFT V K ++ +G G G V Y LE VAIK+L R
Sbjct: 12 SVEIGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAILERN---VAIKKLSRPFQ 62
Query: 105 NGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLL-----VYEYMPLGSLE-DHLH 158
N R + E++++ ++H N++ L+ Q+ L VY M L +
Sbjct: 63 NQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTP--QKSLEEFQDVYIVMELMDANLSQVI 119
Query: 159 DLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFG 218
+ D +R+ + + G+++LH +I+RDLK SNI++ K+ DFG
Sbjct: 120 QMELDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 219 LAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
LA+ G ++ V+ Y Y APE + D++S G ++ E+I G
Sbjct: 172 LARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 93/236 (39%), Gaps = 29/236 (12%)
Query: 65 AAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR--NGLQGNREFLVEVLMLSL 122
V N+ L+G G +G VY ++ N+ VAIK+++R L + L E+ +L+
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNR 83
Query: 123 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKG 182
L ++ L D Y+ L + L L L I G
Sbjct: 84 LKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLG 143
Query: 183 LEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVS---------- 232
+++H+ +I+RDLK +N LL + K+ DFGLA+ H+
Sbjct: 144 EKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENE 200
Query: 233 -------------TRVMGTYGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIITGRKA 274
T + T Y APE + + T D++S G + E++ K+
Sbjct: 201 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 28/228 (12%)
Query: 67 VTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR--NGLQGNREFLVEVLMLSLLH 124
V N+ L+G G +G VY ++T + VAIK+++R L + L E+ +L+ L
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK 83
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLE 184
++ L D Y+ L + L L L I G
Sbjct: 84 SDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGEN 143
Query: 185 YLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKL-------------------GPV 225
++H+ +I+RDLK +N LL + K+ DFGLA+ GP
Sbjct: 144 FIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPH 200
Query: 226 GD--KTHVSTRVMGTYGYCAPEYAMTGQLTLKS-DVYSFGVVLLEIIT 270
K +++ V+ T Y APE + + KS D++S G + E++
Sbjct: 201 NKNLKKQLTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 39/257 (15%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G G V ++ VAIK+L R N R + E++++ ++H N+++L+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLN 128
Query: 134 YCA------DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
+ LV E M + +L D +R+ + + G+++LH
Sbjct: 129 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL--DHERMSYLLYQMLC-----GIKHLH 181
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYA 247
+I+RDLK SNI++ K+ DFGLA+ G ++ V+ Y Y APE
Sbjct: 182 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVI 235
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT------GRKAIDNTRAAGEH----------NLVAWAR 291
+ D++S G ++ E++ GR ID E L R
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295
Query: 292 PLFKDRRKFSQMADPTL 308
++R K++ + P L
Sbjct: 296 NYVENRPKYAGLTFPKL 312
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 29/230 (12%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S I TFT V K ++ +G G G V + VAIK+L R N
Sbjct: 12 SVEIGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGYCA------DGDQRLLVYEYMPLGSLEDHLHDLP 161
R + E++++ ++H N++ L+ + +V E M + +L
Sbjct: 66 HAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL- 123
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA+
Sbjct: 124 -DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 222 LGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
G ++ V+ Y Y APE + D++S G ++ E+I G
Sbjct: 175 TA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 101/227 (44%), Gaps = 31/227 (13%)
Query: 62 RELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV------ 115
+E ++R L +G F ++ E N+ A+K+ +++ L+ R+F
Sbjct: 24 KEKDKYINDYRIIRTLNQGKFNKII--LCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKI 81
Query: 116 -----------EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSL---EDHLHDLP 161
E+ +++ + + + G + D+ ++YEYM S+ +++ L
Sbjct: 82 SIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLD 141
Query: 162 PDKKRLDWTTRMR-IAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLA 220
+ ++ I Y+H++ N + +RD+K SNIL+ + KLSDFG +
Sbjct: 142 KNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGES 199
Query: 221 KLGPVGDKTHVSTRVMGTYGYCAPEYAM--TGQLTLKSDVYSFGVVL 265
+ + DK +R GTY + PE+ + K D++S G+ L
Sbjct: 200 EY--MVDKKIKGSR--GTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 29/230 (12%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S I TFT V K ++ +G G G V + VAIK+L R N
Sbjct: 12 SVEIGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGY------CADGDQRLLVYEYMPLGSLEDHLHDLP 161
R + E++++ ++H N++ L+ + +V E M + +L
Sbjct: 66 HAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL- 123
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA+
Sbjct: 124 -DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 222 LGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
G ++ V+ Y Y APE + D++S G ++ E+I G
Sbjct: 175 TA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 29/230 (12%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S I TFT V K ++ +G G G V + VAIK+L R N
Sbjct: 13 SVEIGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 66
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGY------CADGDQRLLVYEYMPLGSLEDHLHDLP 161
R + E++++ ++H N++ L+ + +V E M + +L
Sbjct: 67 HAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL- 124
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA+
Sbjct: 125 -DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 175
Query: 222 LGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
G ++ V+ Y Y APE + D++S G ++ E+I G
Sbjct: 176 TA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 18/202 (8%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGN--------REFLVEVLMLSLLHHPNL 128
LG G FG V+ + N+ V +K + + + + + +E+ +LS + H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 129 VNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHD 188
+ ++ + LV E G D P RLD I + YL
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRL 148
Query: 189 KANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM 248
K +I+RD+K NI++ E + KL DFG A G + GT YCAPE M
Sbjct: 149 K---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT---FCGTIEYCAPEVLM 202
Query: 249 TGQLT-LKSDVYSFGVVLLEII 269
+ +++S GV L ++
Sbjct: 203 GNPYRGPELEMWSLGVTLYTLV 224
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 35/249 (14%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S + TFT V K ++ +G G G V ++ VAIK+L R N
Sbjct: 12 SVEVGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT 65
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGY------CADGDQRLLVYEYMPLGSLEDHLHDLP 161
R + E++++ ++H N+++L+ + LV E M + +L
Sbjct: 66 HAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMEL- 123
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA+
Sbjct: 124 -DHERMSYLLYQMLX-----GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 222 LGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT------GRKAI 275
G ++ V+ Y Y APE + D++S G ++ E++ GR I
Sbjct: 175 TA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 231
Query: 276 DNTRAAGEH 284
D E
Sbjct: 232 DQWNKVIEQ 240
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 108/258 (41%), Gaps = 35/258 (13%)
Query: 42 KKEASKDGGSDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ 101
K + S + TFT V K ++ +G G G V ++ VAIK+
Sbjct: 4 KSKVDNQFYSVEVGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKK 57
Query: 102 LDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA------DGDQRLLVYEYMPLGS 152
L R N R + E++++ ++H N+++L+ + LV E M
Sbjct: 58 LSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL 116
Query: 153 LEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHP 212
+ +L D +R+ + + G+++LH +I+RDLK SNI++
Sbjct: 117 CQVIQMEL--DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTL 166
Query: 213 KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT-- 270
K+ DFGLA+ G ++ V+ Y Y APE + D++S G ++ E++
Sbjct: 167 KILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
Query: 271 ----GRKAIDNTRAAGEH 284
GR ID E
Sbjct: 224 ILFPGRDYIDQWNKVIEQ 241
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 35/249 (14%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S + TFT V K ++ +G G G V ++ VAIK+L R N
Sbjct: 5 SVEVGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT 58
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGYCA------DGDQRLLVYEYMPLGSLEDHLHDLP 161
R + E++++ ++H N+++L+ + LV E M + +L
Sbjct: 59 HAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMEL- 116
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA+
Sbjct: 117 -DHERMSYLLYQMLX-----GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 167
Query: 222 LGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT------GRKAI 275
G ++ V+ Y Y APE + D++S G ++ E++ GR I
Sbjct: 168 TA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 224
Query: 276 DNTRAAGEH 284
D E
Sbjct: 225 DQWNKVIEQ 233
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 35/249 (14%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S + TFT V K ++ +G G G V ++ VAIK+L R N
Sbjct: 12 SVEVGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT 65
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGY------CADGDQRLLVYEYMPLGSLEDHLHDLP 161
R + E++++ ++H N+++L+ + LV E M + +L
Sbjct: 66 HAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMEL- 123
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA+
Sbjct: 124 -DHERMSYLLYQMLX-----GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 222 LGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT------GRKAI 275
G ++ V+ Y Y APE + D++S G ++ E++ GR I
Sbjct: 175 TA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 231
Query: 276 DNTRAAGEH 284
D E
Sbjct: 232 DQWNKVIEQ 240
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 35/249 (14%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S + TFT V K ++ +G G G V ++ VAIK+L R N
Sbjct: 12 SVEVGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT 65
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGYCA------DGDQRLLVYEYMPLGSLEDHLHDLP 161
R + E++++ ++H N+++L+ + LV E M + +L
Sbjct: 66 HAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL- 123
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA+
Sbjct: 124 -DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 222 LGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT------GRKAI 275
G ++ V+ Y Y APE + D++S G ++ E++ GR I
Sbjct: 175 TA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 231
Query: 276 DNTRAAGEH 284
D E
Sbjct: 232 DQWNKVIEQ 240
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 39/257 (15%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
+G G G V ++ VAIK+L R N R + E++++ ++H N+++L+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLN 128
Query: 134 YCA------DGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLH 187
+ LV E M + +L D +R+ + + G+++LH
Sbjct: 129 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL--DHERMSYLLYQMLC-----GIKHLH 181
Query: 188 DKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYA 247
+I+RDLK SNI++ K+ DFGLA+ G ++ V+ Y Y APE
Sbjct: 182 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVI 235
Query: 248 MTGQLTLKSDVYSFGVVLLEIIT------GRKAIDNTRAAGEH----------NLVAWAR 291
+ D++S G ++ E++ GR ID E L R
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295
Query: 292 PLFKDRRKFSQMADPTL 308
++R K++ + P L
Sbjct: 296 NYVENRPKYAGLTFPKL 312
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 35/249 (14%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S + TFT V K ++ +G G G V ++ VAIK+L R N
Sbjct: 12 SVEVGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT 65
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLL-----VYEYMPLGSLE-DHLHDLP 161
R + E++++ ++H N+++L+ Q+ L VY M L + +
Sbjct: 66 HAKRAYR-ELVLMKXVNHKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLXQVIQME 122
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 222 LGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT------GRKAI 275
G ++ V+ Y Y APE + D++S G ++ E++ GR I
Sbjct: 175 TA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 231
Query: 276 DNTRAAGEH 284
D E
Sbjct: 232 DQWNKVIEQ 240
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 108/258 (41%), Gaps = 35/258 (13%)
Query: 42 KKEASKDGGSDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ 101
K + S + TFT V K ++ +G G G V ++ VAIK+
Sbjct: 3 KSKVDNQFYSVEVGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKK 56
Query: 102 LDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA------DGDQRLLVYEYMPLGS 152
L R N R + E++++ ++H N+++L+ + LV E M
Sbjct: 57 LSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL 115
Query: 153 LEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHP 212
+ +L D +R+ + + G+++LH +I+RDLK SNI++
Sbjct: 116 CQVIQMEL--DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTL 165
Query: 213 KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT-- 270
K+ DFGLA+ G ++ V+ Y Y APE + D++S G ++ E++
Sbjct: 166 KILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
Query: 271 ----GRKAIDNTRAAGEH 284
GR ID E
Sbjct: 223 ILFPGRDYIDQWNKVIEQ 240
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 23/227 (10%)
Query: 63 ELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGN-----------R 111
EL A+ + + G +G V G ++S VAIK++ G +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAG-VDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 112 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTT 171
L E+ +L+ HHPN++ L ++ + Y+ + L + D++ +
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ 134
Query: 172 RMR-IAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPV-GDKT 229
++ GL LH+ V++RDL NILL + + DF LA+ +KT
Sbjct: 135 HIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADANKT 191
Query: 230 HVSTRVMGTYGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIITGRKAI 275
H T Y APE M + T D++S G V+ E+ RKA+
Sbjct: 192 HYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKAL 233
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 35/249 (14%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S + TFT V K ++ +G G G V ++ VAIK+L R N
Sbjct: 13 SVEVGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT 66
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGYCA------DGDQRLLVYEYMPLGSLEDHLHDLP 161
R + E++++ ++H N+++L+ + LV E M + +L
Sbjct: 67 HAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL- 124
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA+
Sbjct: 125 -DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 175
Query: 222 LGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT------GRKAI 275
G ++ V+ Y Y APE + D++S G ++ E++ GR I
Sbjct: 176 TA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 232
Query: 276 DNTRAAGEH 284
D E
Sbjct: 233 DQWNKVIEQ 241
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFL--VEVLM-----LSLLHHPNL 128
+LG+G V++GR + T + AIK + N FL V+V M L L+H N+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFN------NISFLRPVDVQMREFEVLKKLNHKNI 69
Query: 129 VNLIGYCADGDQR--LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYL 186
V L + R +L+ E+ P GSL L + P + L + + + G+ +L
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEE-PSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 187 HDKANPPVIYRDLKCSNIL--LGEGYHP--KLSDFGLAKLGPVGDKTHVSTRVMGTYGYC 242
+ +++R++K NI+ +GE KL+DFG A+ + D + GT Y
Sbjct: 129 RENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR--ELEDDEQF-VXLYGTEEYL 182
Query: 243 APEYAMTGQLTLKS----------DVYSFGVVLLEIITG 271
P+ M + L+ D++S GV TG
Sbjct: 183 HPD--MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 108/258 (41%), Gaps = 35/258 (13%)
Query: 42 KKEASKDGGSDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQ 101
K + S + TFT V K ++ +G G G V ++ VAIK+
Sbjct: 2 KSKVDNQFYSVEVGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKK 55
Query: 102 LDR---NGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA------DGDQRLLVYEYMPLGS 152
L R N R + E++++ ++H N+++L+ + LV E M
Sbjct: 56 LSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL 114
Query: 153 LEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHP 212
+ +L D +R+ + + G+++LH +I+RDLK SNI++
Sbjct: 115 CQVIQMEL--DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTL 164
Query: 213 KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT-- 270
K+ DFGLA+ G ++ V+ Y Y APE + D++S G ++ E++
Sbjct: 165 KILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
Query: 271 ----GRKAIDNTRAAGEH 284
GR ID E
Sbjct: 222 ILFPGRDYIDQWNKVIEQ 239
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 35/249 (14%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S + TFT V K ++ +G G G V ++ VAIK+L R N
Sbjct: 6 SVEVGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT 59
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGYCA------DGDQRLLVYEYMPLGSLEDHLHDLP 161
R + E++++ ++H N+++L+ + LV E M + +L
Sbjct: 60 HAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL- 117
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA+
Sbjct: 118 -DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 168
Query: 222 LGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT------GRKAI 275
G ++ V+ Y Y APE + D++S G ++ E++ GR I
Sbjct: 169 TA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 225
Query: 276 DNTRAAGEH 284
D E
Sbjct: 226 DQWNKVIEQ 234
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 23/227 (10%)
Query: 63 ELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGN-----------R 111
EL A+ + + G +G V G ++S VAIK++ G +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAG-VDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 112 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTT 171
L E+ +L+ HHPN++ L ++ + Y+ + L + D++ +
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ 134
Query: 172 RMR-IAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPV-GDKT 229
++ GL LH+ V++RDL NILL + + DF LA+ +KT
Sbjct: 135 HIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADANKT 191
Query: 230 HVSTRVMGTYGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIITGRKAI 275
H T Y APE M + T D++S G V+ E+ RKA+
Sbjct: 192 HYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKAL 233
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 35/249 (14%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S + TFT V K ++ +G G G V ++ VAIK+L R N
Sbjct: 6 SVEVGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT 59
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGYCA------DGDQRLLVYEYMPLGSLEDHLHDLP 161
R + E++++ ++H N+++L+ + LV E M + +L
Sbjct: 60 HAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL- 117
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA+
Sbjct: 118 -DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 168
Query: 222 LGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT------GRKAI 275
G ++ V+ Y Y APE + D++S G ++ E++ GR I
Sbjct: 169 TA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 225
Query: 276 DNTRAAGEH 284
D E
Sbjct: 226 DQWNKVIEQ 234
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 35/249 (14%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S + TFT V K ++ +G G G V ++ VAIK+L R N
Sbjct: 5 SVEVGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT 58
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGYCA------DGDQRLLVYEYMPLGSLEDHLHDLP 161
R + E++++ ++H N+++L+ + LV E M + +L
Sbjct: 59 HAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL- 116
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA+
Sbjct: 117 -DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 167
Query: 222 LGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT------GRKAI 275
G ++ V+ Y Y APE + D++S G ++ E++ GR I
Sbjct: 168 TA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 224
Query: 276 DNTRAAGEH 284
D E
Sbjct: 225 DQWNKVIEQ 233
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 106/249 (42%), Gaps = 35/249 (14%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S + TFT V K ++ +G G G V ++ VAIK+L R N
Sbjct: 12 SVEVGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT 65
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGYCA------DGDQRLLVYEYMPLGSLEDHLHDLP 161
R + E++++ ++H N+++L+ + LV E M + + +
Sbjct: 66 HAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQME 122
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 222 LGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT------GRKAI 275
G ++ V+ Y Y APE + D++S G ++ E++ GR I
Sbjct: 175 TA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 231
Query: 276 DNTRAAGEH 284
D E
Sbjct: 232 DQWNKVIEQ 240
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 99/230 (43%), Gaps = 29/230 (12%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S I TFT V K ++ +G G G V + VAIK+L R N
Sbjct: 14 SVEIGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 67
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGY------CADGDQRLLVYEYMPLGSLEDHLHDLP 161
R + E++++ ++H N++ L+ + +V E M + +L
Sbjct: 68 HAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL- 125
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA+
Sbjct: 126 -DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 176
Query: 222 LGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
G + V+ Y Y APE + D++S G ++ E+I G
Sbjct: 177 TA--GTSFMMVPFVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 14/200 (7%)
Query: 77 LGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQG--NREFLVEVLMLSLLHHPNLVNLIGY 134
LG+G F V + Q A K ++ L +++ E + LL HPN+V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 135 CADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPV 194
++ L+++ + G L + D ++ + + + LE + V
Sbjct: 90 ISEEGHHYLIFDLVTGGELFE-------DIVAREYYSEADASHCIQQILEAVLHCHQMGV 142
Query: 195 IYRDLKCSNILLG---EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQ 251
++RDLK N+LL +G KL+DFGLA V + GT GY +PE
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 252 LTLKSDVYSFGVVLLEIITG 271
D+++ GV+L ++ G
Sbjct: 201 YGKPVDLWACGVILYILLVG 220
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 103/249 (41%), Gaps = 35/249 (14%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S I TFT V K ++ +G G G V + VAIK+L R N
Sbjct: 12 SVEIGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGY------CADGDQRLLVYEYMPLGSLEDHLHDLP 161
R + E++++ ++H N++ L+ + +V E M + +L
Sbjct: 66 HAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL- 123
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA+
Sbjct: 124 -DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 222 LGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT------GRKAI 275
G + V+ Y Y APE + D++S G ++ E++ GR I
Sbjct: 175 TA--GTSFMMEPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYI 231
Query: 276 DNTRAAGEH 284
D E
Sbjct: 232 DQWNKVIEQ 240
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 68 TKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV---EVLMLSLLH 124
+ N+ LG+G F V + ++T A K ++ L R+F E + L
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQ 62
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLE 184
HPN+V L + LV++ + G L + D ++ + + + LE
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFE-------DIVAREFYSEADASHCIQQILE 115
Query: 185 YLHDKANPPVIYRDLKCSNILLG---EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
+ + +++R+LK N+LL +G KL+DFGLA + H GT GY
Sbjct: 116 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGY 172
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
+PE + D+++ GV+L ++ G
Sbjct: 173 LSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 68 TKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV---EVLMLSLLH 124
+ N+ LG+G F V + ++T A K ++ L R+F E + L
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQ 63
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLE 184
HPN+V L + LV++ + G L + D ++ + + + LE
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFE-------DIVAREFYSEADASHCIQQILE 116
Query: 185 YLHDKANPPVIYRDLKCSNILLG---EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
+ + +++R+LK N+LL +G KL+DFGLA + H GT GY
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGY 173
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
+PE + D+++ GV+L ++ G
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 68 TKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLV---EVLMLSLLH 124
+ N+ LG+G F V + ++T A K ++ L R+F E + L
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQ 63
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLE 184
HPN+V L + LV++ + G L + D ++ + + + LE
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFE-------DIVAREFYSEADASHCIQQILE 116
Query: 185 YLHDKANPPVIYRDLKCSNILLG---EGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGY 241
+ + +++R+LK N+LL +G KL+DFGLA + H GT GY
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGY 173
Query: 242 CAPEYAMTGQLTLKSDVYSFGVVLLEIITG 271
+PE + D+++ GV+L ++ G
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 31/223 (13%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDR--NGLQGNREFLVEVLMLSLLHHPNLVNLIG 133
L+G G +G V + + +VVAIK++ R L + L E+ +L+ L+H ++V ++
Sbjct: 60 LIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLD 119
Query: 134 YCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEYLHDKANPP 193
D Y+ L + L L + G++Y+H
Sbjct: 120 IVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAG--- 176
Query: 194 VIYRDLKCSNILLGEGYHPKLSDFGLAK-------------LGPVGDKTHVST------- 233
+++RDLK +N L+ + K+ DFGLA+ + P D ++ T
Sbjct: 177 ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNL 236
Query: 234 --RVMG---TYGYCAPEYAMTGQ-LTLKSDVYSFGVVLLEIIT 270
++ G T Y APE + + T DV+S G + E++
Sbjct: 237 KRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 38/213 (17%)
Query: 67 VTKNFRADCLLGEGGFGRVYKGRLESTN-QVVAIKQLDRNG-------LQGNREFLVEVL 118
V + + GG G +Y + N + V +K L +G R+FL EV+
Sbjct: 78 VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVV 137
Query: 119 MLSLLHHPNLVNLIGYCADGDQR-----LLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRM 173
HP++V + + D+ +V EY+ SL+ P + + + +
Sbjct: 138 ------HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEI 191
Query: 174 RIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFG-LAKLGPVGDKTHVS 232
A L YLH ++Y DLK NI+L E KL D G ++++ G
Sbjct: 192 LPA------LSYLHSIG---LVYNDLKPENIMLTE-EQLKLIDLGAVSRINSFG------ 235
Query: 233 TRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVL 265
+ GT G+ APE TG T+ +D+Y+ G L
Sbjct: 236 -YLYGTPGFQAPEIVRTGP-TVATDIYTVGRTL 266
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 103/249 (41%), Gaps = 35/249 (14%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S I TFT V K ++ +G G G V + VAIK+L R N
Sbjct: 12 SVEIGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGY------CADGDQRLLVYEYMPLGSLEDHLHDLP 161
R + E++++ ++H N++ L+ + +V E M + +L
Sbjct: 66 HAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL- 123
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA+
Sbjct: 124 -DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 222 LGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT------GRKAI 275
G + V+ Y Y APE + D++S G ++ E++ GR I
Sbjct: 175 TA--GTSFMMEPEVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYI 231
Query: 276 DNTRAAGEH 284
D E
Sbjct: 232 DQWNKVIEQ 240
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 35/249 (14%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S I TFT V K ++ +G G G V + VAIK+L R N
Sbjct: 6 SVEIGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 59
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGY------CADGDQRLLVYEYMPLGSLEDHLHDLP 161
R + E++++ ++H N++ L+ + +V E M + +L
Sbjct: 60 HAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL- 117
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA+
Sbjct: 118 -DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 168
Query: 222 LGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT------GRKAI 275
G ++ V+ Y Y APE + D++S G ++ E++ GR I
Sbjct: 169 TA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYI 225
Query: 276 DNTRAAGEH 284
D E
Sbjct: 226 DQWNKVIEQ 234
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 35/249 (14%)
Query: 51 SDHIAAHTFTFRELAAVTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDR---NGL 107
S I TFT V K ++ +G G G V + VAIK+L R N
Sbjct: 17 SVEIGDSTFT------VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 70
Query: 108 QGNREFLVEVLMLSLLHHPNLVNLIGY------CADGDQRLLVYEYMPLGSLEDHLHDLP 161
R + E++++ ++H N++ L+ + +V E M + +L
Sbjct: 71 HAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL- 128
Query: 162 PDKKRLDWTTRMRIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAK 221
D +R+ + + G+++LH +I+RDLK SNI++ K+ DFGLA+
Sbjct: 129 -DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 179
Query: 222 LGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIIT------GRKAI 275
G ++ V+ Y Y APE + D++S G ++ E++ GR I
Sbjct: 180 TA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYI 236
Query: 276 DNTRAAGEH 284
D E
Sbjct: 237 DQWNKVIEQ 245
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHP---NLVNLI 132
++G+G FG+V K +Q VA+K + RN + +R+ E+ +L L N +N+I
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMV-RNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRM--RIAAGAAKGLEYLHDKA 190
+ R + L S+ +L++L K ++ + + A + L+ LH
Sbjct: 163 HMLENFTFRNHICMTFELLSM--NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR 220
Query: 191 NPPVIYRDLKCSNILLGEGYHP--KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM 248
+I+ DLK NILL + K+ DFG + + V T + + Y APE +
Sbjct: 221 ---IIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYTXIQSRF-YRAPEVIL 272
Query: 249 TGQLTLKSDVYSFGVVLLEIITG 271
+ + D++S G +L E++TG
Sbjct: 273 GARYGMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 76 LLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHP---NLVNLI 132
++G+G FG+V K +Q VA+K + RN + +R+ E+ +L L N +N+I
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMV-RNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 133 GYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRM--RIAAGAAKGLEYLHDKA 190
+ R + L S+ +L++L K ++ + + A + L+ LH
Sbjct: 163 HMLENFTFRNHICMTFELLSM--NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR 220
Query: 191 NPPVIYRDLKCSNILLGEGYHP--KLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAM 248
+I+ DLK NILL + K+ DFG + V T + + Y APE +
Sbjct: 221 ---IIHCDLKPENILLKQQGRSGIKVIDFG----SSCYEHQRVYTXIQSRF-YRAPEVIL 272
Query: 249 TGQLTLKSDVYSFGVVLLEIITG 271
+ + D++S G +L E++TG
Sbjct: 273 GARYGMPIDMWSLGCILAELLTG 295
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 102/269 (37%), Gaps = 74/269 (27%)
Query: 70 NFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNRE-FLVEVLMLSLLHHPNL 128
+F +G GGFG V++ + + + AIK++ + RE + EV L+ L HP +
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 66
Query: 129 VNLIG---------YCADGDQRLLVYEY--MPLGS------------------LEDHLHD 159
V + + D+ L E PL S ++ +
Sbjct: 67 VRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQ 126
Query: 160 LPPDKKRL---------------DWTTR------------MRIAAGAAKGLEYLHDKANP 192
L P ++ DW R + I A+ +E+LH K
Sbjct: 127 LQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG-- 184
Query: 193 PVIYRDLKCSNILLGEGYHPKLSDFGLAK-----------LGPV-GDKTHVSTRVMGTYG 240
+++RDLK SNI K+ DFGL L P+ TH +GT
Sbjct: 185 -LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQ--VGTKL 241
Query: 241 YCAPEYAMTGQLTLKSDVYSFGVVLLEII 269
Y +PE + K D++S G++L E++
Sbjct: 242 YMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 67 VTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHP 126
+ + + + +G G +G V + T A K++ + ++ F E+ ++ L HP
Sbjct: 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHP 66
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSL-EDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
N++ L D LV E G L E +H K+ + RI + Y
Sbjct: 67 NIIRLYETFEDNTDIYLVMELCTGGELFERVVH-----KRVFRESDAARIMKDVLSAVAY 121
Query: 186 LHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYC 242
H K N V +RDLK N L KL DFGLA G + T+V GT Y
Sbjct: 122 CH-KLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTKV-GTPYYV 175
Query: 243 APEYAMTGQLTLKSDVYSFGVVLLEIITG 271
+P+ + G + D +S GV++ ++ G
Sbjct: 176 SPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 33/188 (17%)
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMR-------IAA 177
HPN++ YC++ R L Y+ L +L DL K D +++ +
Sbjct: 86 HPNVIRY--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 178 GAAKGLEYLHDKANPPVIYRDLKCSNILL-------------GEGYHPKLSDFGLAKLGP 224
A G+ +LH + +I+RDLK NIL+ E +SDFGL K
Sbjct: 141 QIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 225 VGDKTHVS--TRVMGTYGYCAPEY---AMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTR 279
G GT G+ APE + +LT D++S G V I++ K +
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 257
Query: 280 AAGEHNLV 287
+ E N++
Sbjct: 258 YSRESNII 265
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 33/188 (17%)
Query: 125 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWTTRMR-------IAA 177
HPN++ YC++ R L Y+ L +L DL K D +++ +
Sbjct: 86 HPNVIRY--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 178 GAAKGLEYLHDKANPPVIYRDLKCSNILL-------------GEGYHPKLSDFGLAKLGP 224
A G+ +LH + +I+RDLK NIL+ E +SDFGL K
Sbjct: 141 QIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 225 VGDKTHVS--TRVMGTYGYCAPEY---AMTGQLTLKSDVYSFGVVLLEIITGRKAIDNTR 279
G GT G+ APE + +LT D++S G V I++ K +
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 257
Query: 280 AAGEHNLV 287
+ E N++
Sbjct: 258 YSRESNII 265
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 67 VTKNFRADCLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHP 126
+ + + + +G G +G V + T A K++ + ++ F E+ ++ L HP
Sbjct: 24 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHP 83
Query: 127 NLVNLIGYCADGDQRLLVYEYMPLGSL-EDHLHDLPPDKKRLDWTTRMRIAAGAAKGLEY 185
N++ L D LV E G L E +H K+ + RI + Y
Sbjct: 84 NIIRLYETFEDNTDIYLVMELCTGGELFERVVH-----KRVFRESDAARIMKDVLSAVAY 138
Query: 186 LHDKANPPVIYRDLKCSNILL---GEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYC 242
H K N V +RDLK N L KL DFGLA G + T+V GT Y
Sbjct: 139 CH-KLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTKV-GTPYYV 192
Query: 243 APEYAMTGQLTLKSDVYSFGVVLLEIITG 271
+P+ + G + D +S GV++ ++ G
Sbjct: 193 SPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,128,373
Number of Sequences: 62578
Number of extensions: 464297
Number of successful extensions: 3764
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 173
Number of HSP's that attempted gapping in prelim test: 943
Number of HSP's gapped (non-prelim): 1122
length of query: 376
length of database: 14,973,337
effective HSP length: 100
effective length of query: 276
effective length of database: 8,715,537
effective search space: 2405488212
effective search space used: 2405488212
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)