Query 017176
Match_columns 376
No_of_seqs 352 out of 2751
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 10:10:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017176.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017176hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b0p_A TRNA-dihydrouridine syn 100.0 4.6E-59 1.6E-63 454.9 30.3 315 6-333 1-315 (350)
2 1vhn_A Putative flavin oxidore 100.0 6.3E-55 2.2E-59 421.0 24.9 306 5-334 1-308 (318)
3 1z41_A YQJM, probable NADH-dep 100.0 1.4E-37 4.9E-42 302.0 22.9 239 2-248 11-319 (338)
4 3gr7_A NADPH dehydrogenase; fl 100.0 7.6E-37 2.6E-41 296.7 23.5 239 2-248 11-319 (340)
5 2r14_A Morphinone reductase; H 100.0 8.4E-37 2.9E-41 300.0 21.3 233 2-248 17-340 (377)
6 1vyr_A Pentaerythritol tetrani 100.0 2E-36 6.9E-41 296.3 23.2 232 2-248 11-335 (364)
7 3kru_A NADH:flavin oxidoreduct 100.0 4.1E-36 1.4E-40 291.3 22.2 237 2-248 10-319 (343)
8 2gou_A Oxidoreductase, FMN-bin 100.0 3.5E-36 1.2E-40 294.7 21.3 231 2-247 11-333 (365)
9 2hsa_B 12-oxophytodienoate red 100.0 1.3E-35 4.5E-40 293.6 22.1 241 2-248 24-360 (402)
10 1icp_A OPR1, 12-oxophytodienoa 100.0 1E-35 3.5E-40 292.4 20.4 235 2-248 22-342 (376)
11 3l5a_A NADH/flavin oxidoreduct 100.0 1.1E-35 3.9E-40 295.2 20.6 241 2-248 33-358 (419)
12 3hgj_A Chromate reductase; TIM 100.0 4.6E-35 1.6E-39 285.4 23.7 239 2-248 10-330 (349)
13 3l5l_A Xenobiotic reductase A; 100.0 1.4E-34 4.9E-39 283.3 22.5 240 2-248 10-337 (363)
14 3gka_A N-ethylmaleimide reduct 100.0 1.8E-34 6.1E-39 281.3 20.8 226 2-248 18-328 (361)
15 4ab4_A Xenobiotic reductase B; 100.0 3.4E-34 1.2E-38 279.4 21.3 226 2-248 10-320 (362)
16 1o94_A Tmadh, trimethylamine d 100.0 4.6E-33 1.6E-37 295.8 21.8 239 2-248 15-333 (729)
17 1ps9_A 2,4-dienoyl-COA reducta 100.0 6.7E-33 2.3E-37 292.0 21.1 242 2-248 11-322 (671)
18 3k30_A Histamine dehydrogenase 100.0 6.3E-33 2.2E-37 293.1 17.1 241 2-248 20-336 (690)
19 3tjl_A NADPH dehydrogenase; OL 100.0 8.8E-33 3E-37 272.0 14.0 236 2-248 20-358 (407)
20 3aty_A Tcoye, prostaglandin F2 100.0 2.7E-31 9.3E-36 260.9 21.8 230 2-248 13-348 (379)
21 1jub_A Dihydroorotate dehydrog 100.0 3.4E-31 1.2E-35 254.3 21.1 231 2-247 6-283 (311)
22 2e6f_A Dihydroorotate dehydrog 100.0 6.3E-31 2.2E-35 252.8 20.2 231 2-247 8-285 (314)
23 4ef8_A Dihydroorotate dehydrog 100.0 1E-30 3.5E-35 253.8 20.8 230 2-246 41-317 (354)
24 3oix_A Putative dihydroorotate 100.0 1.6E-29 5.6E-34 244.7 21.7 231 2-247 42-316 (345)
25 1f76_A Dihydroorotate dehydrog 100.0 7.7E-30 2.6E-34 247.5 19.4 228 2-247 49-330 (336)
26 4a3u_A NCR, NADH\:flavin oxido 100.0 2.9E-29 1E-33 245.1 20.3 234 2-248 10-327 (358)
27 4gbu_A NADPH dehydrogenase 1; 100.0 1.4E-29 5E-34 250.7 18.3 239 2-247 23-359 (400)
28 3zwt_A Dihydroorotate dehydrog 100.0 1.4E-28 4.8E-33 240.3 18.7 228 2-247 54-339 (367)
29 1tv5_A Dhodehase, dihydroorota 100.0 6.3E-28 2.1E-32 240.3 19.9 228 2-247 86-414 (443)
30 1ep3_A Dihydroorotate dehydrog 100.0 1.5E-28 5E-33 235.6 14.6 228 2-247 11-281 (311)
31 3i65_A Dihydroorotate dehydrog 99.9 4.4E-27 1.5E-31 231.3 16.6 228 2-247 88-386 (415)
32 1gte_A Dihydropyrimidine dehyd 99.9 2.3E-26 7.7E-31 252.4 22.5 231 3-248 538-828 (1025)
33 2nli_A Lactate oxidase; flavoe 99.9 1.3E-24 4.6E-29 212.6 17.4 249 2-296 74-358 (368)
34 1p0k_A Isopentenyl-diphosphate 99.9 2.6E-23 9E-28 202.5 19.1 256 2-295 49-324 (349)
35 3tjx_A Dihydroorotate dehydrog 99.9 1.4E-22 4.9E-27 197.7 20.4 232 2-247 41-318 (354)
36 2nzl_A Hydroxyacid oxidase 1; 99.9 7.2E-23 2.5E-27 201.7 18.1 209 2-241 88-341 (392)
37 1gox_A (S)-2-hydroxy-acid oxid 99.9 1.3E-22 4.4E-27 199.0 18.4 247 2-297 65-355 (370)
38 1kbi_A Cytochrome B2, L-LCR; f 99.9 3.2E-22 1.1E-26 203.3 18.6 251 2-297 183-478 (511)
39 2z6i_A Trans-2-enoyl-ACP reduc 99.9 4.9E-21 1.7E-25 185.3 17.8 192 6-246 10-201 (332)
40 1vcf_A Isopentenyl-diphosphate 99.8 1.4E-20 4.6E-25 182.2 16.8 217 2-242 52-291 (332)
41 1p4c_A L(+)-mandelate dehydrog 99.8 1.2E-19 4.2E-24 178.3 16.7 248 2-297 66-353 (380)
42 3vkj_A Isopentenyl-diphosphate 99.8 5.8E-19 2E-23 172.3 14.4 215 2-240 53-300 (368)
43 3bw2_A 2-nitropropane dioxygen 99.8 3.8E-18 1.3E-22 167.2 19.5 200 8-246 10-247 (369)
44 3bo9_A Putative nitroalkan dio 99.8 3.8E-18 1.3E-22 164.5 18.4 193 4-245 22-214 (326)
45 2gjl_A Hypothetical protein PA 99.8 8.5E-18 2.9E-22 162.2 18.6 194 5-244 12-209 (328)
46 1ypf_A GMP reductase; GUAC, pu 99.8 7.9E-18 2.7E-22 162.9 17.2 199 2-244 40-247 (336)
47 3sgz_A Hydroxyacid oxidase 2; 99.8 3.7E-18 1.3E-22 164.8 14.1 252 4-301 65-351 (352)
48 3sr7_A Isopentenyl-diphosphate 99.8 7.6E-18 2.6E-22 163.9 14.3 217 2-241 80-312 (365)
49 1eep_A Inosine 5'-monophosphat 99.7 1.5E-17 5.2E-22 164.9 15.5 205 4-246 38-295 (404)
50 3khj_A Inosine-5-monophosphate 99.7 1.8E-16 6.3E-21 154.4 15.3 198 3-246 40-246 (361)
51 3r2g_A Inosine 5'-monophosphat 99.7 2.7E-16 9.3E-21 152.4 12.0 195 2-245 36-237 (361)
52 1mzh_A Deoxyribose-phosphate a 99.6 4.8E-16 1.6E-20 142.1 10.1 183 12-238 12-206 (225)
53 3ffs_A Inosine-5-monophosphate 99.6 8.6E-15 2.9E-19 143.8 13.4 210 3-246 37-285 (400)
54 2qr6_A IMP dehydrogenase/GMP r 99.6 9.3E-15 3.2E-19 144.3 13.6 213 2-244 61-314 (393)
55 4fo4_A Inosine 5'-monophosphat 99.6 4.7E-15 1.6E-19 144.4 11.0 205 4-246 42-250 (366)
56 2yzr_A Pyridoxal biosynthesis 99.5 8.2E-14 2.8E-18 131.7 11.9 154 80-246 27-283 (330)
57 2c6q_A GMP reductase 2; TIM ba 99.5 2.4E-13 8.3E-18 132.0 15.3 203 3-245 52-261 (351)
58 3o07_A Pyridoxine biosynthesis 99.5 6E-13 2.1E-17 122.4 14.1 151 80-248 21-243 (291)
59 4fxs_A Inosine-5'-monophosphat 99.4 3.6E-13 1.2E-17 136.5 12.8 131 79-244 232-371 (496)
60 2y88_A Phosphoribosyl isomeras 99.4 2.2E-12 7.7E-17 118.6 14.6 150 64-247 74-236 (244)
61 1jvn_A Glutamine, bifunctional 99.4 3.7E-13 1.3E-17 138.3 9.9 203 28-247 289-537 (555)
62 4avf_A Inosine-5'-monophosphat 99.4 1.2E-12 4.1E-17 132.6 12.5 132 79-245 230-370 (490)
63 1vzw_A Phosphoribosyl isomeras 99.3 4.4E-11 1.5E-15 110.0 15.7 152 63-247 74-233 (244)
64 2agk_A 1-(5-phosphoribosyl)-5- 99.3 5.1E-12 1.8E-16 117.7 8.7 181 24-246 43-249 (260)
65 1jcn_A Inosine monophosphate d 99.2 1.4E-10 4.9E-15 118.1 16.7 138 79-246 256-397 (514)
66 3tdn_A FLR symmetric alpha-bet 99.2 4.4E-12 1.5E-16 117.1 4.4 153 63-247 78-240 (247)
67 3usb_A Inosine-5'-monophosphat 99.2 6.4E-11 2.2E-15 120.5 12.7 130 80-245 258-397 (511)
68 1thf_D HISF protein; thermophI 99.2 1.4E-09 4.9E-14 100.3 19.2 151 63-247 73-235 (253)
69 1y0e_A Putative N-acetylmannos 99.2 3.1E-10 1.1E-14 102.8 13.8 164 67-250 9-217 (223)
70 2uva_G Fatty acid synthase bet 99.2 2.1E-10 7.1E-15 132.0 15.1 202 8-245 582-804 (2060)
71 2qjg_A Putative aldolase MJ040 99.2 3.3E-10 1.1E-14 106.0 13.8 198 6-246 31-247 (273)
72 1qo2_A Molecule: N-((5-phospho 99.1 4.5E-10 1.5E-14 103.2 14.1 146 64-246 73-233 (241)
73 1yxy_A Putative N-acetylmannos 99.1 4.7E-10 1.6E-14 102.5 12.5 105 122-249 120-227 (234)
74 1h5y_A HISF; histidine biosynt 99.1 2.2E-09 7.6E-14 98.4 16.4 149 64-245 77-236 (253)
75 2w6r_A Imidazole glycerol phos 99.1 1.5E-09 5.1E-14 101.0 15.2 151 63-247 73-240 (266)
76 2nv1_A Pyridoxal biosynthesis 99.1 7.4E-10 2.5E-14 105.5 13.2 151 81-244 32-246 (305)
77 1ka9_F Imidazole glycerol phos 99.1 3.6E-09 1.2E-13 97.5 16.8 151 63-247 74-236 (252)
78 1vrd_A Inosine-5'-monophosphat 99.0 6.9E-10 2.4E-14 112.5 11.3 141 77-247 236-380 (494)
79 2pgw_A Muconate cycloisomerase 99.0 9.2E-09 3.1E-13 100.9 18.4 142 67-247 139-282 (384)
80 1wv2_A Thiazole moeity, thiazo 99.0 6.3E-08 2.2E-12 88.5 22.4 208 2-245 13-227 (265)
81 3igs_A N-acetylmannosamine-6-p 99.0 4.1E-08 1.4E-12 89.7 20.6 76 162-249 145-222 (232)
82 3tdn_A FLR symmetric alpha-bet 99.0 1.8E-09 6.2E-14 99.5 10.5 98 136-247 21-119 (247)
83 3q58_A N-acetylmannosamine-6-p 99.0 4.7E-09 1.6E-13 95.8 13.0 128 83-250 94-223 (229)
84 1xm3_A Thiazole biosynthesis p 98.9 3.6E-08 1.2E-12 91.8 17.0 205 2-244 6-215 (264)
85 1ofd_A Ferredoxin-dependent gl 98.9 2.5E-08 8.5E-13 110.4 16.0 219 6-243 865-1135(1520)
86 1zfj_A Inosine monophosphate d 98.9 3.5E-08 1.2E-12 99.8 15.5 132 80-246 235-375 (491)
87 2uv8_G Fatty acid synthase sub 98.8 1E-08 3.5E-13 117.5 12.1 202 8-245 589-811 (2051)
88 1ea0_A Glutamate synthase [NAD 98.8 4.5E-08 1.5E-12 108.2 16.5 114 118-242 976-1099(1479)
89 1xg4_A Probable methylisocitra 98.8 3.8E-08 1.3E-12 92.8 13.9 202 18-241 23-240 (295)
90 4af0_A Inosine-5'-monophosphat 98.8 3.5E-07 1.2E-11 91.7 19.2 131 75-242 279-419 (556)
91 1wa3_A 2-keto-3-deoxy-6-phosph 98.7 3.6E-08 1.2E-12 88.0 9.9 148 64-244 9-185 (205)
92 1mdl_A Mandelate racemase; iso 98.7 1.4E-07 4.9E-12 91.5 14.1 141 66-244 135-278 (359)
93 2zbt_A Pyridoxal biosynthesis 98.7 8E-08 2.7E-12 90.9 11.9 163 64-243 21-245 (297)
94 2ovl_A Putative racemase; stru 98.7 1.4E-07 4.9E-12 91.9 14.1 133 75-245 146-281 (371)
95 2gl5_A Putative dehydratase pr 98.7 2.3E-07 7.7E-12 91.8 15.6 139 75-235 150-298 (410)
96 1qo2_A Molecule: N-((5-phospho 98.7 1.8E-08 6.1E-13 92.4 6.9 97 137-248 13-114 (241)
97 2rdx_A Mandelate racemase/muco 98.7 3.7E-07 1.3E-11 89.3 16.1 130 74-245 144-276 (379)
98 1geq_A Tryptophan synthase alp 98.7 1.9E-07 6.4E-12 85.8 13.0 168 65-242 5-226 (248)
99 1rvk_A Isomerase/lactonizing e 98.7 7.4E-07 2.5E-11 87.2 17.5 136 74-241 148-287 (382)
100 1rd5_A Tryptophan synthase alp 98.7 6.7E-07 2.3E-11 83.0 16.1 161 65-241 18-235 (262)
101 2p8b_A Mandelate racemase/muco 98.6 5.6E-07 1.9E-11 87.6 16.2 142 65-245 131-276 (369)
102 2htm_A Thiazole biosynthesis p 98.6 2.6E-06 9E-11 78.0 19.4 203 2-241 6-212 (268)
103 2nql_A AGR_PAT_674P, isomerase 98.6 3.4E-07 1.2E-11 89.9 14.1 140 66-245 154-297 (388)
104 2poz_A Putative dehydratase; o 98.6 3.5E-07 1.2E-11 89.8 13.5 140 73-235 135-279 (392)
105 2qdd_A Mandelate racemase/muco 98.6 9.9E-07 3.4E-11 86.2 16.2 140 65-246 135-277 (378)
106 4adt_A Pyridoxine biosynthetic 98.6 8.5E-07 2.9E-11 83.7 15.0 49 195-244 196-246 (297)
107 3zen_D Fatty acid synthase; tr 98.6 1.1E-07 3.7E-12 112.8 10.2 201 8-245 427-655 (3089)
108 2hzg_A Mandelate racemase/muco 98.6 1.2E-06 4.2E-11 86.2 16.3 147 65-245 134-286 (401)
109 3eez_A Putative mandelate race 98.5 1.1E-06 3.8E-11 85.9 15.2 141 64-246 134-277 (378)
110 2ps2_A Putative mandelate race 98.5 2.2E-06 7.5E-11 83.5 17.0 139 64-244 135-277 (371)
111 1nu5_A Chloromuconate cycloiso 98.5 1.8E-06 6.1E-11 84.1 15.6 136 71-244 138-277 (370)
112 1thf_D HISF protein; thermophI 98.5 1.6E-07 5.6E-12 86.3 7.8 82 159-250 36-117 (253)
113 1tkk_A Similar to chloromucona 98.5 2.9E-06 9.8E-11 82.5 16.3 140 66-243 131-275 (366)
114 2qgy_A Enolase from the enviro 98.5 2.4E-06 8.3E-11 83.8 15.6 133 73-243 147-282 (391)
115 3ozy_A Putative mandelate race 98.5 2.6E-06 8.9E-11 83.6 15.7 137 65-240 139-281 (389)
116 3tsm_A IGPS, indole-3-glycerol 98.5 5.6E-06 1.9E-10 77.1 17.0 62 194-256 206-268 (272)
117 3vk5_A MOEO5; TIM barrel, tran 98.5 8.2E-07 2.8E-11 82.3 10.9 156 75-246 51-268 (286)
118 3qja_A IGPS, indole-3-glycerol 98.4 1.5E-06 5.2E-11 81.1 12.5 52 194-245 199-251 (272)
119 2qq6_A Mandelate racemase/muco 98.4 2.9E-06 9.9E-11 83.8 15.2 133 75-235 149-290 (410)
120 1qop_A Tryptophan synthase alp 98.4 5.5E-06 1.9E-10 77.1 15.5 166 64-242 16-240 (268)
121 2ox4_A Putative mandelate race 98.4 3.8E-06 1.3E-10 82.7 15.2 135 75-235 146-289 (403)
122 3vnd_A TSA, tryptophan synthas 98.4 2.5E-06 8.5E-11 79.3 13.1 167 64-240 17-239 (267)
123 2v82_A 2-dehydro-3-deoxy-6-pho 98.4 3E-06 1E-10 75.8 13.2 152 63-242 5-182 (212)
124 1ka9_F Imidazole glycerol phos 98.4 5.1E-07 1.7E-11 83.0 8.2 79 160-248 38-116 (252)
125 2og9_A Mandelate racemase/muco 98.4 4.3E-06 1.5E-10 82.1 15.2 123 75-235 162-287 (393)
126 2y88_A Phosphoribosyl isomeras 98.4 8.3E-07 2.8E-11 81.1 8.5 81 160-251 38-118 (244)
127 2oz8_A MLL7089 protein; struct 98.4 1.5E-05 5.3E-10 78.0 17.7 124 75-236 145-273 (389)
128 2qde_A Mandelate racemase/muco 98.3 7E-06 2.4E-10 80.7 15.2 123 74-235 144-269 (397)
129 3stp_A Galactonate dehydratase 98.3 6.6E-06 2.2E-10 81.3 14.9 143 65-239 168-314 (412)
130 3rcy_A Mandelate racemase/muco 98.3 9.5E-06 3.3E-10 80.7 15.6 142 74-242 145-290 (433)
131 3oa3_A Aldolase; structural ge 98.3 9.4E-06 3.2E-10 75.7 14.4 144 75-241 124-270 (288)
132 2pp0_A L-talarate/galactarate 98.3 8.9E-06 3E-10 80.0 15.2 123 75-235 175-300 (398)
133 1vzw_A Phosphoribosyl isomeras 98.3 1E-06 3.6E-11 80.6 7.8 81 160-251 39-119 (244)
134 2o56_A Putative mandelate race 98.3 9.3E-06 3.2E-10 80.0 15.2 135 75-235 152-295 (407)
135 2cu0_A Inosine-5'-monophosphat 98.3 4.9E-06 1.7E-10 84.0 12.6 125 81-242 231-363 (486)
136 3vzx_A Heptaprenylglyceryl pho 98.3 3.2E-05 1.1E-09 70.0 16.4 54 194-248 167-220 (228)
137 1me8_A Inosine-5'-monophosphat 98.3 3E-06 1E-10 85.9 10.4 134 80-243 244-388 (503)
138 4gj1_A 1-(5-phosphoribosyl)-5- 98.2 3.1E-05 1.1E-09 71.0 16.0 146 65-243 74-231 (243)
139 1h5y_A HISF; histidine biosynt 98.2 1.8E-06 6.2E-11 78.7 7.8 79 160-248 40-118 (253)
140 3sjn_A Mandelate racemase/muco 98.2 7.7E-06 2.6E-10 79.8 12.3 126 75-235 146-274 (374)
141 2gdq_A YITF; mandelate racemas 98.2 1.6E-05 5.5E-10 77.7 14.4 124 74-235 135-265 (382)
142 3nav_A Tryptophan synthase alp 98.2 1.2E-05 4E-10 74.9 12.7 171 65-241 20-242 (271)
143 1tzz_A Hypothetical protein L1 98.2 1.8E-05 6.2E-10 77.6 14.5 123 75-235 165-294 (392)
144 3f4w_A Putative hexulose 6 pho 98.2 1.7E-05 5.9E-10 70.7 13.0 143 64-245 53-196 (211)
145 3ndo_A Deoxyribose-phosphate a 98.2 1.5E-05 5.3E-10 72.2 12.4 144 75-241 78-226 (231)
146 2yw3_A 4-hydroxy-2-oxoglutarat 98.2 3.6E-06 1.2E-10 75.4 7.8 148 64-241 12-184 (207)
147 3ovp_A Ribulose-phosphate 3-ep 98.2 3.1E-05 1.1E-09 70.3 14.2 156 66-245 6-206 (228)
148 3bjs_A Mandelate racemase/muco 98.2 1.4E-05 4.7E-10 79.4 12.7 123 74-235 183-310 (428)
149 3rr1_A GALD, putative D-galact 98.2 3E-05 1E-09 76.4 14.8 144 64-237 114-260 (405)
150 2p10_A MLL9387 protein; putati 98.1 3E-06 1E-10 78.4 6.9 162 64-243 94-266 (286)
151 3ngj_A Deoxyribose-phosphate a 98.1 2.1E-05 7.1E-10 71.6 12.3 141 75-240 93-235 (239)
152 3r12_A Deoxyribose-phosphate a 98.1 2.6E-05 9E-10 71.7 12.9 142 75-241 109-252 (260)
153 2zad_A Muconate cycloisomerase 98.1 8.1E-05 2.8E-09 71.6 17.2 131 70-239 134-270 (345)
154 2hxt_A L-fuconate dehydratase; 98.1 3.6E-05 1.2E-09 76.6 14.5 125 73-235 196-323 (441)
155 2f6u_A GGGPS, (S)-3-O-geranylg 98.1 1.8E-05 6.3E-10 72.0 11.1 53 194-247 177-229 (234)
156 1viz_A PCRB protein homolog; s 98.1 3.4E-05 1.1E-09 70.5 12.8 153 80-251 23-225 (240)
157 4dwd_A Mandelate racemase/muco 98.1 6.3E-05 2.2E-09 73.8 15.3 139 65-235 126-270 (393)
158 3sbf_A Mandelate racemase / mu 98.1 3.3E-05 1.1E-09 76.0 13.2 153 64-239 122-285 (401)
159 2ekc_A AQ_1548, tryptophan syn 98.1 5.7E-05 1.9E-09 70.0 14.1 153 74-242 28-240 (262)
160 4e5t_A Mandelate racemase / mu 98.1 3.6E-05 1.2E-09 75.8 13.1 135 74-235 150-288 (404)
161 1vc4_A Indole-3-glycerol phosp 98.0 2.4E-05 8.3E-10 72.2 10.8 50 195-245 192-245 (254)
162 1ub3_A Aldolase protein; schif 98.0 6.6E-05 2.2E-09 67.7 13.3 142 75-241 69-212 (220)
163 3r4e_A Mandelate racemase/muco 98.0 2.3E-05 7.9E-10 77.5 11.1 146 65-236 133-301 (418)
164 3i4k_A Muconate lactonizing en 98.0 0.00011 3.9E-09 71.7 15.9 133 66-236 139-275 (383)
165 1w8s_A FBP aldolase, fructose- 98.0 0.00013 4.5E-09 67.5 15.5 133 81-245 96-240 (263)
166 3jva_A Dipeptide epimerase; en 98.0 0.00012 4.2E-09 70.7 15.9 134 69-241 133-269 (354)
167 3inp_A D-ribulose-phosphate 3- 98.0 6.5E-05 2.2E-09 68.8 12.8 153 65-244 28-231 (246)
168 4e4u_A Mandalate racemase/muco 98.0 7.7E-05 2.6E-09 73.6 13.7 135 74-235 143-281 (412)
169 1tqj_A Ribulose-phosphate 3-ep 98.0 3.7E-05 1.3E-09 69.9 10.5 155 67-245 7-210 (230)
170 2w6r_A Imidazole glycerol phos 98.0 8.5E-06 2.9E-10 75.3 6.2 79 160-248 37-118 (266)
171 3ro6_B Putative chloromuconate 98.0 4.1E-05 1.4E-09 74.1 11.2 134 66-238 131-268 (356)
172 3w01_A Heptaprenylglyceryl pho 97.9 8.1E-05 2.8E-09 67.5 11.9 53 194-247 173-225 (235)
173 1h1y_A D-ribulose-5-phosphate 97.9 0.00018 6.1E-09 65.1 14.2 145 64-245 64-210 (228)
174 1sjd_A N-acylamino acid racema 97.9 9.6E-05 3.3E-09 71.7 12.8 127 67-235 132-262 (368)
175 2fli_A Ribulose-phosphate 3-ep 97.9 0.00019 6.6E-09 64.1 13.5 154 67-245 6-207 (220)
176 3tji_A Mandelate racemase/muco 97.9 8.1E-05 2.8E-09 73.7 11.9 152 66-240 145-307 (422)
177 1yad_A Regulatory protein TENI 97.8 4E-05 1.4E-09 68.9 7.9 74 163-244 127-200 (221)
178 3tj4_A Mandelate racemase; eno 97.8 0.00044 1.5E-08 67.2 15.7 123 75-235 151-277 (372)
179 1ujp_A Tryptophan synthase alp 97.8 0.00034 1.2E-08 65.0 14.1 162 67-242 18-235 (271)
180 3cwo_X Beta/alpha-barrel prote 97.8 0.0001 3.5E-09 65.7 10.2 72 164-247 141-214 (237)
181 1rpx_A Protein (ribulose-phosp 97.8 0.00042 1.4E-08 62.5 14.1 143 64-245 68-216 (230)
182 3ajx_A 3-hexulose-6-phosphate 97.8 0.0005 1.7E-08 60.8 14.1 140 64-244 53-194 (207)
183 4a29_A Engineered retro-aldol 97.8 0.0019 6.6E-08 58.9 18.1 150 75-245 65-242 (258)
184 3ddm_A Putative mandelate race 97.8 0.00013 4.6E-09 71.4 11.3 124 73-235 153-280 (392)
185 3gd6_A Muconate cycloisomerase 97.7 0.0005 1.7E-08 67.3 15.1 138 66-244 129-276 (391)
186 2qr6_A IMP dehydrogenase/GMP r 97.7 0.00014 4.7E-09 71.3 10.9 103 118-239 140-242 (393)
187 3q45_A Mandelate racemase/muco 97.7 0.00047 1.6E-08 66.9 14.6 131 66-235 131-264 (368)
188 3my9_A Muconate cycloisomerase 97.7 0.00071 2.4E-08 65.8 15.6 133 66-236 137-272 (377)
189 3v3w_A Starvation sensing prot 97.7 0.00036 1.2E-08 69.0 13.7 146 66-237 140-308 (424)
190 3ugv_A Enolase; enzyme functio 97.7 0.0007 2.4E-08 66.2 15.2 132 66-235 159-299 (390)
191 1chr_A Chloromuconate cycloiso 97.7 0.00063 2.1E-08 66.0 14.6 122 76-235 144-268 (370)
192 3toy_A Mandelate racemase/muco 97.7 0.001 3.4E-08 64.9 15.7 132 66-235 158-293 (383)
193 3dg3_A Muconate cycloisomerase 97.6 0.00085 2.9E-08 65.0 14.9 132 66-235 130-265 (367)
194 3vcn_A Mannonate dehydratase; 97.6 0.00036 1.2E-08 69.1 12.4 146 66-237 141-309 (425)
195 3glc_A Aldolase LSRF; TIM barr 97.6 0.0014 4.7E-08 61.6 15.6 149 64-244 105-265 (295)
196 3t6c_A RSPA, putative MAND fam 97.6 0.0017 5.8E-08 64.5 17.0 152 66-240 146-325 (440)
197 1r0m_A N-acylamino acid racema 97.6 0.00033 1.1E-08 68.1 11.5 120 74-235 147-268 (375)
198 3go2_A Putative L-alanine-DL-g 97.6 0.00074 2.5E-08 66.5 14.0 137 74-236 142-292 (409)
199 3ctl_A D-allulose-6-phosphate 97.6 0.00061 2.1E-08 61.8 12.4 153 67-244 3-204 (231)
200 1n7k_A Deoxyribose-phosphate a 97.6 0.00086 2.9E-08 60.8 13.2 136 75-241 86-228 (234)
201 3fv9_G Mandelate racemase/muco 97.6 0.003 1E-07 61.6 17.9 139 63-238 133-275 (386)
202 3i6e_A Muconate cycloisomerase 97.6 0.0019 6.6E-08 62.9 16.5 133 66-236 139-273 (385)
203 4e4f_A Mannonate dehydratase; 97.6 0.00053 1.8E-08 67.9 12.5 148 65-235 139-308 (426)
204 1tqx_A D-ribulose-5-phosphate 97.6 0.0062 2.1E-07 55.0 18.4 51 193-244 159-209 (227)
205 2zc8_A N-acylamino acid racema 97.6 0.0005 1.7E-08 66.6 11.9 120 74-235 140-261 (369)
206 1i4n_A Indole-3-glycerol phosp 97.5 0.0016 5.5E-08 59.7 14.3 138 63-245 100-239 (251)
207 1to3_A Putative aldolase YIHT; 97.5 0.002 6.7E-08 60.9 15.4 138 81-242 112-260 (304)
208 1xi3_A Thiamine phosphate pyro 97.5 0.00015 5.2E-09 64.4 7.1 73 164-244 126-198 (215)
209 3mqt_A Mandelate racemase/muco 97.5 0.0014 4.9E-08 64.1 14.6 123 78-235 155-281 (394)
210 3r0u_A Enzyme of enolase super 97.5 0.0029 1E-07 61.5 16.5 133 66-237 133-270 (379)
211 4gj1_A 1-(5-phosphoribosyl)-5- 97.5 0.00013 4.3E-09 66.9 6.4 79 159-247 37-115 (243)
212 3tha_A Tryptophan synthase alp 97.5 0.00022 7.7E-09 65.4 8.0 168 66-241 15-232 (252)
213 3o63_A Probable thiamine-phosp 97.5 0.00022 7.7E-09 65.2 7.8 75 164-245 153-228 (243)
214 2czd_A Orotidine 5'-phosphate 97.5 0.0016 5.5E-08 57.8 13.2 125 79-244 67-193 (208)
215 3p3b_A Mandelate racemase/muco 97.5 0.00044 1.5E-08 67.6 10.0 128 77-235 150-284 (392)
216 2tps_A Protein (thiamin phosph 97.4 0.00029 1E-08 63.2 8.0 75 164-244 134-208 (227)
217 3ih1_A Methylisocitrate lyase; 97.4 0.0013 4.5E-08 62.0 12.6 200 18-241 35-248 (305)
218 3mkc_A Racemase; metabolic pro 97.4 0.0019 6.7E-08 63.1 14.3 123 78-235 160-286 (394)
219 3tcs_A Racemase, putative; PSI 97.4 0.0024 8.2E-08 62.4 14.2 131 75-236 146-280 (388)
220 1wbh_A KHG/KDPG aldolase; lyas 97.4 0.0018 6.1E-08 58.0 11.9 152 64-245 15-193 (214)
221 4e38_A Keto-hydroxyglutarate-a 97.3 0.00042 1.4E-08 62.9 7.6 153 65-245 34-210 (232)
222 3mwc_A Mandelate racemase/muco 97.3 0.0017 5.7E-08 63.8 11.9 123 76-240 164-289 (400)
223 2a4a_A Deoxyribose-phosphate a 97.3 0.0012 4.1E-08 61.4 10.2 135 75-231 104-249 (281)
224 3eoo_A Methylisocitrate lyase; 97.3 0.0026 8.8E-08 59.8 12.3 201 18-242 28-245 (298)
225 1vhc_A Putative KHG/KDPG aldol 97.2 0.00041 1.4E-08 62.7 6.1 67 163-245 127-194 (224)
226 1vcv_A Probable deoxyribose-ph 97.2 0.0057 1.9E-07 55.1 13.5 136 76-231 66-211 (226)
227 3dgb_A Muconate cycloisomerase 97.2 0.0058 2E-07 59.5 14.7 129 71-237 144-276 (382)
228 3lye_A Oxaloacetate acetyl hyd 97.1 0.0067 2.3E-07 57.1 13.7 201 18-241 31-252 (307)
229 1pii_A N-(5'phosphoribosyl)ant 97.1 0.011 3.8E-07 58.6 15.6 147 64-256 108-255 (452)
230 4e8g_A Enolase, mandelate race 97.1 0.01 3.5E-07 57.9 15.2 131 67-238 156-290 (391)
231 1p1x_A Deoxyribose-phosphate a 97.1 0.0022 7.7E-08 59.0 9.6 140 75-245 83-229 (260)
232 3b8i_A PA4872 oxaloacetate dec 97.0 0.021 7.3E-07 53.2 15.8 197 18-240 27-238 (287)
233 3ceu_A Thiamine phosphate pyro 97.0 0.0013 4.5E-08 58.5 6.9 72 165-244 106-180 (210)
234 1zlp_A PSR132, petal death pro 97.0 0.01 3.4E-07 56.2 13.2 195 18-240 45-261 (318)
235 3fcp_A L-Ala-D/L-Glu epimerase 96.9 0.019 6.5E-07 55.7 15.4 131 70-238 142-276 (381)
236 4a35_A Mitochondrial enolase s 96.9 0.017 5.8E-07 57.3 15.2 125 73-235 199-328 (441)
237 4hnl_A Mandelate racemase/muco 96.9 0.0092 3.1E-07 58.8 13.1 149 65-235 143-301 (421)
238 3lab_A Putative KDPG (2-keto-3 96.9 0.0022 7.4E-08 57.4 7.6 155 63-245 11-195 (217)
239 2hjp_A Phosphonopyruvate hydro 96.9 0.032 1.1E-06 52.1 15.7 195 18-240 21-239 (290)
240 1mxs_A KDPG aldolase; 2-keto-3 96.9 0.0054 1.8E-07 55.3 10.0 49 195-245 154-203 (225)
241 3ik4_A Mandelate racemase/muco 96.8 0.033 1.1E-06 53.7 16.2 131 67-235 135-269 (365)
242 1qap_A Quinolinic acid phospho 96.8 0.0074 2.5E-07 56.6 11.2 109 106-245 174-289 (296)
243 3jr2_A Hexulose-6-phosphate sy 96.8 0.0022 7.6E-08 57.4 7.2 140 64-243 59-201 (218)
244 3fa4_A 2,3-dimethylmalate lyas 96.7 0.018 6E-07 54.1 12.9 200 18-240 24-243 (302)
245 3cu2_A Ribulose-5-phosphate 3- 96.7 0.013 4.4E-07 53.2 11.6 134 68-242 73-223 (237)
246 1s2w_A Phosphoenolpyruvate pho 96.7 0.031 1.1E-06 52.4 14.3 202 18-241 25-243 (295)
247 3dip_A Enolase; structural gen 96.7 0.014 4.8E-07 57.3 12.5 130 80-235 161-294 (410)
248 4eiv_A Deoxyribose-phosphate a 96.7 0.017 5.9E-07 53.6 11.9 132 75-228 98-253 (297)
249 1q6o_A Humps, 3-keto-L-gulonat 96.6 0.011 3.7E-07 52.7 10.0 131 74-244 67-199 (216)
250 2ze3_A DFA0005; organic waste 96.5 0.058 2E-06 50.0 14.8 189 17-240 21-236 (275)
251 3kts_A Glycerol uptake operon 96.5 0.0019 6.6E-08 56.6 4.5 47 196-243 140-186 (192)
252 1jvn_A Glutamine, bifunctional 96.5 0.0044 1.5E-07 63.3 7.8 78 158-242 285-373 (555)
253 3nl6_A Thiamine biosynthetic b 96.5 0.057 2E-06 54.8 15.8 77 163-245 125-218 (540)
254 1oy0_A Ketopantoate hydroxymet 96.3 0.045 1.5E-06 50.7 12.6 121 63-211 32-153 (281)
255 2b7n_A Probable nicotinate-nuc 96.3 0.013 4.6E-07 54.2 9.0 95 123-245 169-266 (273)
256 3khj_A Inosine-5-monophosphate 96.3 0.023 8E-07 54.8 10.8 95 118-236 79-173 (361)
257 4fo4_A Inosine 5'-monophosphat 96.3 0.017 5.7E-07 55.9 9.7 98 118-236 80-177 (366)
258 2h6r_A Triosephosphate isomera 96.2 0.014 4.7E-07 52.3 8.4 133 83-245 75-208 (219)
259 4dye_A Isomerase; enolase fami 96.2 0.073 2.5E-06 52.0 14.0 121 76-237 169-292 (398)
260 1vc4_A Indole-3-glycerol phosp 96.2 0.023 8E-07 52.0 9.8 70 159-241 71-140 (254)
261 2agk_A 1-(5-phosphoribosyl)-5- 96.2 0.004 1.4E-07 57.4 4.5 69 159-248 44-120 (260)
262 4dxk_A Mandelate racemase / mu 96.2 0.013 4.6E-07 57.2 8.6 131 80-235 157-290 (400)
263 3ve9_A Orotidine-5'-phosphate 96.1 0.034 1.2E-06 49.7 10.1 138 64-245 50-189 (215)
264 1o66_A 3-methyl-2-oxobutanoate 96.0 0.13 4.3E-06 47.5 13.9 120 64-212 16-136 (275)
265 3q58_A N-acetylmannosamine-6-p 96.0 0.4 1.4E-05 43.0 17.1 117 75-235 34-155 (229)
266 1x1o_A Nicotinate-nucleotide p 96.0 0.033 1.1E-06 52.0 9.9 109 106-245 161-277 (286)
267 3ih1_A Methylisocitrate lyase; 95.9 0.12 3.9E-06 48.6 13.5 160 59-235 23-194 (305)
268 1m3u_A 3-methyl-2-oxobutanoate 95.9 0.18 6.2E-06 46.2 14.3 143 63-235 15-180 (264)
269 3qja_A IGPS, indole-3-glycerol 95.9 0.0096 3.3E-07 55.2 5.8 75 158-245 77-151 (272)
270 3iv3_A Tagatose 1,6-diphosphat 95.9 0.17 5.9E-06 48.0 14.5 152 82-243 115-287 (332)
271 3exr_A RMPD (hexulose-6-phosph 95.9 0.052 1.8E-06 48.6 10.4 143 64-244 58-204 (221)
272 3ru6_A Orotidine 5'-phosphate 95.8 0.33 1.1E-05 45.5 16.1 143 64-244 76-238 (303)
273 3tsm_A IGPS, indole-3-glycerol 95.8 0.023 7.9E-07 52.6 8.1 73 159-244 85-157 (272)
274 2jbm_A Nicotinate-nucleotide p 95.8 0.019 6.4E-07 54.0 7.6 66 164-245 215-281 (299)
275 3r2g_A Inosine 5'-monophosphat 95.8 0.012 4.1E-07 56.7 6.1 63 161-236 107-169 (361)
276 1o66_A 3-methyl-2-oxobutanoate 95.8 0.22 7.5E-06 45.9 14.2 155 18-215 23-204 (275)
277 3m47_A Orotidine 5'-phosphate 95.7 0.2 6.8E-06 45.0 13.5 143 64-244 64-210 (228)
278 3o1n_A 3-dehydroquinate dehydr 95.7 0.54 1.9E-05 43.4 16.7 147 60-237 35-197 (276)
279 3vav_A 3-methyl-2-oxobutanoate 95.6 0.31 1.1E-05 44.9 14.7 124 59-213 23-148 (275)
280 2yyu_A Orotidine 5'-phosphate 95.6 0.13 4.4E-06 46.7 12.1 143 64-244 55-223 (246)
281 1m3u_A 3-methyl-2-oxobutanoate 95.5 0.16 5.6E-06 46.5 12.2 156 18-215 23-204 (264)
282 2pge_A MENC; OSBS, NYSGXRC, PS 95.4 0.25 8.6E-06 47.6 14.3 132 66-235 153-290 (377)
283 1wuf_A Hypothetical protein LI 95.4 0.16 5.6E-06 49.3 12.7 120 74-235 160-281 (393)
284 2qiw_A PEP phosphonomutase; st 95.3 0.34 1.2E-05 44.2 14.0 190 16-238 24-238 (255)
285 3eoo_A Methylisocitrate lyase; 95.3 0.14 4.7E-06 47.9 11.3 101 63-176 20-121 (298)
286 1eix_A Orotidine 5'-monophosph 95.2 0.1 3.5E-06 47.4 10.1 142 65-244 66-229 (245)
287 1vkf_A Glycerol uptake operon 95.2 0.025 8.6E-07 49.2 5.6 43 200-243 142-184 (188)
288 1sfl_A 3-dehydroquinate dehydr 95.2 0.88 3E-05 41.0 16.2 146 66-237 5-163 (238)
289 3lab_A Putative KDPG (2-keto-3 95.1 0.15 5.1E-06 45.5 10.5 78 136-235 14-91 (217)
290 1ypf_A GMP reductase; GUAC, pu 95.1 0.076 2.6E-06 50.5 9.2 93 121-235 82-176 (336)
291 1vqt_A Orotidine 5'-phosphate 95.1 0.22 7.5E-06 44.2 11.6 134 63-244 57-200 (213)
292 1hg3_A Triosephosphate isomera 95.0 1.2 4E-05 39.9 16.3 138 83-251 81-219 (225)
293 4h3d_A 3-dehydroquinate dehydr 95.0 1.8 6.3E-05 39.3 17.9 99 64-174 18-121 (258)
294 1dbt_A Orotidine 5'-phosphate 95.0 0.46 1.6E-05 42.7 13.7 143 64-244 54-222 (239)
295 4aaj_A N-(5'-phosphoribosyl)an 95.0 1.3 4.5E-05 39.6 16.5 178 17-240 26-206 (228)
296 1oy0_A Ketopantoate hydroxymet 95.0 0.35 1.2E-05 44.7 12.8 155 18-215 40-222 (281)
297 1o4u_A Type II quinolic acid p 94.9 0.03 1E-06 52.1 5.6 96 123-245 180-277 (285)
298 4af0_A Inosine-5'-monophosphat 94.8 0.035 1.2E-06 55.8 6.2 64 162-238 289-352 (556)
299 3igs_A N-acetylmannosamine-6-p 94.8 0.24 8E-06 44.6 11.2 103 120-246 5-118 (232)
300 3u9i_A Mandelate racemase/muco 94.8 0.29 1E-05 47.5 12.7 136 70-235 160-299 (393)
301 4avf_A Inosine-5'-monophosphat 94.8 0.042 1.4E-06 55.2 6.7 61 163-236 238-298 (490)
302 2yci_X 5-methyltetrahydrofolat 94.7 0.33 1.1E-05 44.7 12.2 53 75-140 32-84 (271)
303 3tr2_A Orotidine 5'-phosphate 94.7 1.2 4.1E-05 40.1 15.7 191 8-244 8-224 (239)
304 3tfx_A Orotidine 5'-phosphate 94.7 0.85 2.9E-05 41.7 14.7 192 7-244 3-224 (259)
305 3c2e_A Nicotinate-nucleotide p 94.7 0.017 5.8E-07 54.2 3.2 39 206-245 248-286 (294)
306 3paj_A Nicotinate-nucleotide p 94.6 0.19 6.4E-06 47.4 10.2 63 164-245 249-312 (320)
307 4fxs_A Inosine-5'-monophosphat 94.5 0.046 1.6E-06 54.9 6.4 61 163-236 240-300 (496)
308 1qpo_A Quinolinate acid phosph 94.5 0.078 2.7E-06 49.3 7.3 67 164-245 212-278 (284)
309 2chr_A Chloromuconate cycloiso 94.5 1 3.6E-05 43.0 15.7 125 73-235 141-268 (370)
310 2v9d_A YAGE; dihydrodipicolini 94.5 3.4 0.00012 39.2 19.3 153 62-256 98-258 (343)
311 1zfj_A Inosine monophosphate d 94.4 0.044 1.5E-06 54.9 5.8 63 162-237 241-303 (491)
312 4e38_A Keto-hydroxyglutarate-a 94.4 0.36 1.2E-05 43.4 11.2 87 125-236 27-113 (232)
313 3s5s_A Mandelate racemase/muco 94.4 0.42 1.5E-05 46.3 12.6 129 69-235 138-270 (389)
314 4dbe_A Orotidine 5'-phosphate 94.3 0.32 1.1E-05 43.4 10.9 141 64-244 52-195 (222)
315 1xg4_A Probable methylisocitra 94.2 0.33 1.1E-05 45.3 11.0 160 63-235 15-186 (295)
316 3bo9_A Putative nitroalkan dio 94.2 0.48 1.6E-05 44.7 12.4 90 118-235 61-150 (326)
317 3tqv_A Nicotinate-nucleotide p 94.0 0.17 5.9E-06 46.9 8.6 63 164-245 216-279 (287)
318 3usb_A Inosine-5'-monophosphat 94.0 0.13 4.5E-06 51.8 8.5 62 163-237 265-326 (511)
319 2ozt_A TLR1174 protein; struct 94.0 0.78 2.7E-05 43.3 13.4 124 74-235 115-244 (332)
320 1nsj_A PRAI, phosphoribosyl an 93.9 1.9 6.4E-05 37.9 14.8 180 17-244 7-188 (205)
321 3ldv_A Orotidine 5'-phosphate 93.8 0.41 1.4E-05 43.7 10.6 143 64-244 78-242 (255)
322 1v5x_A PRA isomerase, phosphor 93.8 3.2 0.00011 36.3 16.4 176 17-244 6-182 (203)
323 1jcn_A Inosine monophosphate d 93.8 0.085 2.9E-06 53.2 6.6 63 162-237 263-325 (514)
324 2yr1_A 3-dehydroquinate dehydr 93.7 3.9 0.00013 37.1 18.3 145 64-237 19-177 (257)
325 3iwp_A Copper homeostasis prot 93.6 0.69 2.4E-05 42.8 11.7 126 76-235 110-237 (287)
326 1zlp_A PSR132, petal death pro 93.6 0.59 2E-05 44.0 11.5 101 63-176 37-139 (318)
327 2wqp_A Polysialic acid capsule 93.6 1.1 3.8E-05 42.7 13.5 132 75-231 89-231 (349)
328 3b8i_A PA4872 oxaloacetate dec 93.5 0.49 1.7E-05 43.9 10.7 159 63-236 19-188 (287)
329 2gjl_A Hypothetical protein PA 93.4 0.42 1.4E-05 45.0 10.4 96 117-237 50-147 (328)
330 3bw2_A 2-nitropropane dioxygen 93.4 0.7 2.4E-05 44.3 12.1 97 117-237 45-174 (369)
331 2ze3_A DFA0005; organic waste 93.4 1.2 4.1E-05 41.0 13.1 141 81-235 27-187 (275)
332 4h1z_A Enolase Q92ZS5; dehydra 93.4 1 3.5E-05 43.9 13.3 123 74-235 187-312 (412)
333 3cyj_A Mandelate racemase/muco 93.3 1.9 6.5E-05 41.2 15.0 122 75-235 144-269 (372)
334 1y0e_A Putative N-acetylmannos 93.3 0.32 1.1E-05 42.9 8.8 97 124-237 46-147 (223)
335 3ffs_A Inosine-5-monophosphate 93.2 0.22 7.7E-06 48.5 8.2 61 162-236 152-212 (400)
336 4hpn_A Putative uncharacterize 93.2 1.4 4.7E-05 42.3 13.9 121 76-235 145-268 (378)
337 1h1y_A D-ribulose-5-phosphate 93.2 0.38 1.3E-05 42.9 9.2 135 64-237 6-146 (228)
338 1vli_A Spore coat polysacchari 93.2 1.5 5.1E-05 42.3 13.8 132 75-231 99-243 (385)
339 3gnn_A Nicotinate-nucleotide p 93.1 0.29 9.8E-06 45.7 8.4 63 164-245 227-290 (298)
340 3qld_A Mandelate racemase/muco 93.1 1.5 5.1E-05 42.4 13.9 128 66-235 139-269 (388)
341 1wue_A Mandelate racemase/muco 93.0 0.93 3.2E-05 43.7 12.4 120 74-235 160-281 (386)
342 1vrd_A Inosine-5'-monophosphat 93.0 0.14 4.9E-06 51.2 6.7 63 162-237 245-307 (494)
343 2hjp_A Phosphonopyruvate hydro 92.9 0.54 1.8E-05 43.8 10.0 100 64-176 14-113 (290)
344 3vav_A 3-methyl-2-oxobutanoate 92.9 1.9 6.4E-05 39.7 13.5 156 18-215 35-216 (275)
345 3nvt_A 3-deoxy-D-arabino-heptu 92.9 1 3.6E-05 43.5 12.3 110 111-237 231-347 (385)
346 1s2w_A Phosphoenolpyruvate pho 92.8 0.6 2E-05 43.5 10.1 100 63-176 17-117 (295)
347 1gox_A (S)-2-hydroxy-acid oxid 92.8 0.94 3.2E-05 43.5 11.9 42 193-236 212-253 (370)
348 1o60_A 2-dehydro-3-deoxyphosph 92.6 0.85 2.9E-05 42.4 10.8 110 111-238 114-241 (292)
349 1rpx_A Protein (ribulose-phosp 92.5 0.51 1.7E-05 41.9 9.0 129 67-234 13-145 (230)
350 1f6y_A 5-methyltetrahydrofolat 92.4 2.3 7.8E-05 38.8 13.4 97 75-212 23-121 (262)
351 3fok_A Uncharacterized protein 92.4 0.45 1.6E-05 44.4 8.6 124 83-241 134-278 (307)
352 3p6l_A Sugar phosphate isomera 92.4 2.5 8.5E-05 37.7 13.6 138 64-228 9-154 (262)
353 1vs1_A 3-deoxy-7-phosphoheptul 92.3 1.8 6.3E-05 39.8 12.7 146 76-238 88-244 (276)
354 1twd_A Copper homeostasis prot 92.3 2.5 8.6E-05 38.4 13.2 127 76-236 72-198 (256)
355 3iwp_A Copper homeostasis prot 92.3 3.2 0.00011 38.3 14.1 139 67-236 40-186 (287)
356 1wa3_A 2-keto-3-deoxy-6-phosph 92.2 0.53 1.8E-05 40.9 8.7 82 135-238 10-91 (205)
357 1zco_A 2-dehydro-3-deoxyphosph 92.2 1.2 4.2E-05 40.6 11.3 110 112-238 113-229 (262)
358 3l0g_A Nicotinate-nucleotide p 92.2 0.43 1.5E-05 44.5 8.2 91 124-245 196-288 (300)
359 2qiw_A PEP phosphonomutase; st 92.1 0.58 2E-05 42.7 9.0 101 60-176 15-116 (255)
360 2c6q_A GMP reductase 2; TIM ba 92.1 0.35 1.2E-05 46.3 7.8 59 165-236 131-189 (351)
361 3va8_A Probable dehydratase; e 92.1 1.9 6.5E-05 42.5 13.4 121 74-235 190-313 (445)
362 1yxy_A Putative N-acetylmannos 92.1 0.63 2.1E-05 41.4 9.1 132 62-233 15-157 (234)
363 1w0m_A TIM, triosephosphate is 91.8 0.49 1.7E-05 42.4 7.9 131 83-245 78-211 (226)
364 2vc6_A MOSA, dihydrodipicolina 91.8 3.3 0.00011 38.3 13.9 126 75-227 19-152 (292)
365 2z6i_A Trans-2-enoyl-ACP reduc 91.8 0.89 3E-05 42.9 10.2 92 118-237 47-139 (332)
366 3g8r_A Probable spore coat pol 91.6 4.9 0.00017 38.2 15.0 99 112-231 118-220 (350)
367 1eep_A Inosine 5'-monophosphat 91.6 0.26 9E-06 48.0 6.4 61 163-236 162-222 (404)
368 3vdg_A Probable glucarate dehy 91.6 2.6 9E-05 41.5 13.7 121 74-235 192-315 (445)
369 4ef8_A Dihydroorotate dehydrog 91.6 1.5 5E-05 42.0 11.5 143 80-235 61-227 (354)
370 1f6k_A N-acetylneuraminate lya 91.5 8.3 0.00029 35.5 19.5 153 62-256 71-226 (293)
371 3lye_A Oxaloacetate acetyl hyd 91.5 0.81 2.8E-05 42.9 9.4 88 81-176 36-126 (307)
372 1vr6_A Phospho-2-dehydro-3-deo 91.4 1.3 4.4E-05 42.3 10.8 146 75-238 118-312 (350)
373 1xky_A Dihydrodipicolinate syn 91.4 4.9 0.00017 37.3 14.7 126 75-227 31-164 (301)
374 1p0k_A Isopentenyl-diphosphate 91.4 1.2 4.3E-05 42.1 10.8 94 132-236 114-209 (349)
375 3qw3_A Orotidine-5-phosphate d 91.3 2.6 8.9E-05 38.3 12.4 141 63-244 75-236 (255)
376 3f4w_A Putative hexulose 6 pho 91.3 2.3 8E-05 36.8 11.8 120 74-236 10-134 (211)
377 3tak_A DHDPS, dihydrodipicolin 91.2 8.9 0.00031 35.2 19.2 153 62-256 68-224 (291)
378 4h83_A Mandelate racemase/muco 91.2 1.7 5.9E-05 41.9 11.8 124 74-235 163-290 (388)
379 2v82_A 2-dehydro-3-deoxy-6-pho 91.0 1.2 4E-05 38.9 9.6 82 134-237 6-88 (212)
380 3fa4_A 2,3-dimethylmalate lyas 90.9 1.7 5.7E-05 40.6 10.8 88 81-176 29-118 (302)
381 3na8_A Putative dihydrodipicol 90.8 11 0.00036 35.3 22.3 153 62-256 91-248 (315)
382 3b4u_A Dihydrodipicolinate syn 90.7 3.9 0.00013 37.8 13.3 127 74-226 21-158 (294)
383 3sz8_A 2-dehydro-3-deoxyphosph 90.5 2.2 7.6E-05 39.4 11.2 109 111-237 116-242 (285)
384 1o5k_A DHDPS, dihydrodipicolin 90.5 5.3 0.00018 37.1 14.1 125 75-226 31-163 (306)
385 3si9_A DHDPS, dihydrodipicolin 90.4 11 0.00039 35.0 23.8 153 62-256 89-246 (315)
386 2r8w_A AGR_C_1641P; APC7498, d 90.4 4.4 0.00015 38.2 13.6 127 74-227 52-186 (332)
387 1twd_A Copper homeostasis prot 90.4 8.1 0.00028 35.0 14.5 127 81-234 12-146 (256)
388 3daq_A DHDPS, dihydrodipicolin 90.4 11 0.00037 34.7 17.4 153 62-256 69-226 (292)
389 2ehh_A DHDPS, dihydrodipicolin 90.4 7 0.00024 36.0 14.8 125 75-226 19-151 (294)
390 2a4a_A Deoxyribose-phosphate a 90.2 0.87 3E-05 42.1 8.2 86 74-171 169-257 (281)
391 1vhc_A Putative KHG/KDPG aldol 90.2 2.8 9.5E-05 37.3 11.4 79 136-236 18-96 (224)
392 2yxg_A DHDPS, dihydrodipicolin 90.1 6.3 0.00021 36.3 14.2 132 75-233 19-160 (289)
393 2qkf_A 3-deoxy-D-manno-octulos 90.1 1.4 4.9E-05 40.6 9.6 111 111-239 111-239 (280)
394 3ijl_A Muconate cycloisomerase 90.1 2.3 7.7E-05 40.2 11.3 122 71-234 130-251 (338)
395 3vnd_A TSA, tryptophan synthas 90.0 1.8 6.1E-05 39.7 10.1 111 121-241 4-135 (267)
396 3flu_A DHDPS, dihydrodipicolin 89.9 4.8 0.00016 37.3 13.1 126 75-227 26-159 (297)
397 3vc5_A Mandelate racemase/muco 89.9 4.5 0.00015 39.7 13.5 121 74-235 187-310 (441)
398 1zco_A 2-dehydro-3-deoxyphosph 89.8 7.5 0.00026 35.3 14.2 137 66-239 24-168 (262)
399 1rvg_A Fructose-1,6-bisphospha 89.8 7.3 0.00025 36.3 14.1 141 63-231 71-227 (305)
400 3na8_A Putative dihydrodipicol 89.7 3.8 0.00013 38.3 12.4 124 75-225 43-174 (315)
401 2e6f_A Dihydroorotate dehydrog 89.6 3.1 0.00011 38.6 11.7 142 83-236 31-195 (314)
402 2ojp_A DHDPS, dihydrodipicolin 89.5 6.1 0.00021 36.4 13.5 126 75-227 20-153 (292)
403 4adt_A Pyridoxine biosynthetic 89.4 0.76 2.6E-05 42.9 7.2 67 159-233 34-104 (297)
404 3qze_A DHDPS, dihydrodipicolin 89.4 4.3 0.00015 38.0 12.5 127 74-227 41-175 (314)
405 1mxs_A KDPG aldolase; 2-keto-3 89.4 2.3 8E-05 37.8 10.1 90 122-236 16-105 (225)
406 3p0w_A Mandelate racemase/muco 89.3 4 0.00014 40.4 12.8 123 74-235 199-328 (470)
407 3d0c_A Dihydrodipicolinate syn 89.2 0.5 1.7E-05 44.4 5.8 89 146-243 27-120 (314)
408 3si9_A DHDPS, dihydrodipicolin 89.2 4.5 0.00015 37.9 12.4 127 74-227 40-174 (315)
409 3qw4_B UMP synthase; N-termina 89.2 4.3 0.00015 40.0 12.8 142 63-245 76-238 (453)
410 1qwg_A PSL synthase;, (2R)-pho 89.1 4.5 0.00015 36.5 11.7 82 78-177 86-172 (251)
411 3l21_A DHDPS, dihydrodipicolin 89.1 8 0.00027 35.9 14.1 127 74-227 33-167 (304)
412 3mzn_A Glucarate dehydratase; 89.0 5.6 0.00019 39.1 13.5 123 74-235 181-310 (450)
413 1f6k_A N-acetylneuraminate lya 88.8 0.97 3.3E-05 41.9 7.5 88 150-244 22-114 (293)
414 1vr6_A Phospho-2-dehydro-3-deo 88.7 8.4 0.00029 36.6 14.0 56 167-239 190-251 (350)
415 3tr9_A Dihydropteroate synthas 88.6 1.4 4.7E-05 41.4 8.3 62 74-140 46-111 (314)
416 3n9r_A Fructose-bisphosphate a 88.6 3.3 0.00011 38.7 10.8 141 63-231 73-229 (307)
417 1wbh_A KHG/KDPG aldolase; lyas 88.3 3.2 0.00011 36.6 10.1 93 125-245 9-101 (214)
418 4hb7_A Dihydropteroate synthas 88.1 2.7 9.1E-05 38.5 9.7 83 75-175 28-111 (270)
419 1jub_A Dihydroorotate dehydrog 87.9 5.5 0.00019 36.8 12.2 143 81-235 27-191 (311)
420 2nli_A Lactate oxidase; flavoe 87.8 2.2 7.7E-05 40.9 9.5 42 192-235 215-256 (368)
421 3cpr_A Dihydrodipicolinate syn 87.8 1.6 5.3E-05 40.8 8.2 87 150-244 35-126 (304)
422 3cpr_A Dihydrodipicolinate syn 87.7 17 0.00059 33.5 20.3 152 62-256 83-237 (304)
423 3qze_A DHDPS, dihydrodipicolin 87.7 18 0.0006 33.7 24.8 153 62-256 90-246 (314)
424 3gk0_A PNP synthase, pyridoxin 87.7 0.91 3.1E-05 41.4 6.2 147 78-244 54-251 (278)
425 1vli_A Spore coat polysacchari 87.6 12 0.0004 36.1 14.3 140 75-244 42-199 (385)
426 3dz1_A Dihydrodipicolinate syn 87.4 2.1 7.2E-05 40.1 8.9 82 150-239 27-112 (313)
427 1aj0_A DHPS, dihydropteroate s 87.4 1.5 5.1E-05 40.6 7.7 61 75-140 36-96 (282)
428 3q94_A Fructose-bisphosphate a 87.3 6.7 0.00023 36.2 12.0 112 115-240 116-240 (288)
429 2wkj_A N-acetylneuraminate lya 87.3 1.5 5E-05 41.0 7.7 87 150-244 30-121 (303)
430 3jr2_A Hexulose-6-phosphate sy 87.2 4 0.00014 35.7 10.2 128 67-237 9-140 (218)
431 1u83_A Phosphosulfolactate syn 87.1 1.6 5.6E-05 39.9 7.6 81 78-177 111-196 (276)
432 3l21_A DHDPS, dihydrodipicolin 87.0 1.5 5.3E-05 40.8 7.7 87 150-244 34-125 (304)
433 2ftp_A Hydroxymethylglutaryl-C 87.0 17 0.00057 33.5 14.9 193 22-233 33-232 (302)
434 3fkr_A L-2-keto-3-deoxyarabona 87.0 6.4 0.00022 36.6 12.0 114 19-143 26-146 (309)
435 2vef_A Dihydropteroate synthas 87.0 1.4 4.6E-05 41.5 7.3 61 75-140 31-91 (314)
436 3b4u_A Dihydrodipicolinate syn 87.0 1.7 5.9E-05 40.2 8.0 85 150-242 22-111 (294)
437 2r91_A 2-keto-3-deoxy-(6-phosp 87.0 1.3 4.6E-05 40.8 7.2 85 151-244 18-106 (286)
438 1w3i_A EDA, 2-keto-3-deoxy glu 86.9 1.5 5.1E-05 40.6 7.5 86 150-244 18-107 (293)
439 3i4e_A Isocitrate lyase; struc 86.9 24 0.00083 34.4 16.8 157 65-242 153-358 (439)
440 3qfe_A Putative dihydrodipicol 86.9 5.4 0.00018 37.3 11.4 128 75-227 30-166 (318)
441 2nuw_A 2-keto-3-deoxygluconate 86.8 14 0.00048 33.8 14.2 124 75-225 18-147 (288)
442 1nsj_A PRAI, phosphoribosyl an 86.7 8.6 0.00029 33.6 12.0 123 68-236 3-126 (205)
443 2r8w_A AGR_C_1641P; APC7498, d 86.7 21 0.00071 33.5 24.4 157 62-256 101-261 (332)
444 4a29_A Engineered retro-aldol 86.7 2.7 9.2E-05 38.2 8.7 72 159-244 70-141 (258)
445 1eye_A DHPS 1, dihydropteroate 86.6 3.4 0.00012 38.0 9.7 61 74-140 26-86 (280)
446 1gvf_A Tagatose-bisphosphate a 86.6 11 0.00039 34.6 13.2 112 115-240 110-236 (286)
447 1kbi_A Cytochrome B2, L-LCR; f 86.6 4 0.00014 40.9 10.9 42 192-235 329-370 (511)
448 4h2h_A Mandelate racemase/muco 86.5 14 0.00049 35.1 14.5 129 66-235 141-273 (376)
449 3cu2_A Ribulose-5-phosphate 3- 86.5 3.3 0.00011 37.2 9.3 86 66-176 15-102 (237)
450 2wkj_A N-acetylneuraminate lya 86.4 20 0.00069 33.0 21.7 153 62-256 78-234 (303)
451 3m5v_A DHDPS, dihydrodipicolin 86.4 1.4 4.8E-05 41.0 7.0 86 150-243 26-117 (301)
452 2ojp_A DHDPS, dihydrodipicolin 86.4 20 0.00067 32.9 23.4 153 62-256 68-224 (292)
453 2bdq_A Copper homeostasis prot 86.3 7.5 0.00026 34.5 11.3 128 83-234 14-151 (224)
454 3fs2_A 2-dehydro-3-deoxyphosph 86.3 4.3 0.00015 37.7 10.1 107 111-237 137-261 (298)
455 3oix_A Putative dihydroorotate 86.3 6.5 0.00022 37.3 11.7 141 81-234 63-222 (345)
456 2nuw_A 2-keto-3-deoxygluconate 86.2 1.5 5E-05 40.6 7.0 86 150-244 18-107 (288)
457 3dz1_A Dihydrodipicolinate syn 86.1 13 0.00044 34.6 13.6 127 74-227 26-160 (313)
458 1vs1_A 3-deoxy-7-phosphoheptul 86.1 18 0.00062 33.0 14.3 136 67-239 41-183 (276)
459 2rfg_A Dihydrodipicolinate syn 86.0 21 0.00071 32.8 22.4 153 62-256 67-223 (297)
460 1p4c_A L(+)-mandelate dehydrog 86.0 1.1 3.6E-05 43.3 6.2 44 191-236 210-253 (380)
461 2ekc_A AQ_1548, tryptophan syn 86.0 3.8 0.00013 37.2 9.6 107 122-236 4-129 (262)
462 3hgj_A Chromate reductase; TIM 85.9 4.9 0.00017 38.1 10.7 94 62-172 217-317 (349)
463 2bdq_A Copper homeostasis prot 85.8 14 0.00049 32.7 12.8 128 76-235 75-206 (224)
464 3lmz_A Putative sugar isomeras 85.8 8.9 0.00031 33.9 12.0 130 64-227 17-152 (257)
465 3a5f_A Dihydrodipicolinate syn 85.8 1.6 5.6E-05 40.3 7.1 87 150-244 20-111 (291)
466 1w3i_A EDA, 2-keto-3-deoxy glu 85.8 17 0.0006 33.3 14.2 123 74-224 17-146 (293)
467 1m5w_A Pyridoxal phosphate bio 85.8 2.1 7E-05 38.4 7.3 147 78-244 26-223 (243)
468 2zbt_A Pyridoxal biosynthesis 85.7 1.8 6.1E-05 40.0 7.4 69 160-237 35-107 (297)
469 3s5o_A 4-hydroxy-2-oxoglutarat 85.7 3 0.0001 38.8 9.0 82 146-235 29-115 (307)
470 3daq_A DHDPS, dihydrodipicolin 85.7 1.6 5.4E-05 40.5 7.0 86 151-244 22-112 (292)
471 2isw_A Putative fructose-1,6-b 85.6 7.3 0.00025 36.6 11.4 140 64-231 75-229 (323)
472 2v9d_A YAGE; dihydrodipicolini 85.4 1.7 5.9E-05 41.2 7.2 87 150-244 50-141 (343)
473 2r91_A 2-keto-3-deoxy-(6-phosp 85.3 15 0.00052 33.6 13.5 122 75-224 17-145 (286)
474 3tak_A DHDPS, dihydrodipicolin 85.2 1.6 5.6E-05 40.3 6.8 87 150-244 20-111 (291)
475 3v5c_A Mandelate racemase/muco 85.1 5.6 0.00019 38.3 10.8 129 76-235 149-284 (392)
476 3pfr_A Mandelate racemase/muco 85.1 8.9 0.0003 37.7 12.5 123 74-235 184-313 (455)
477 2bmb_A Folic acid synthesis pr 85.0 1.5 5E-05 44.3 6.7 105 75-213 247-362 (545)
478 2rfg_A Dihydrodipicolinate syn 84.9 1.6 5.3E-05 40.6 6.5 86 151-244 20-110 (297)
479 3sr7_A Isopentenyl-diphosphate 84.8 1.2 4.2E-05 42.7 5.8 71 160-235 162-236 (365)
480 2vc6_A MOSA, dihydrodipicolina 84.6 24 0.00082 32.3 24.3 153 62-256 67-224 (292)
481 1wv2_A Thiazole moeity, thiazo 84.4 8.5 0.00029 35.0 10.8 123 25-175 93-218 (265)
482 3nav_A Tryptophan synthase alp 84.3 3.3 0.00011 38.0 8.3 110 122-236 7-132 (271)
483 1me8_A Inosine-5'-monophosphat 84.1 0.69 2.4E-05 46.4 4.0 63 163-238 251-314 (503)
484 1qop_A Tryptophan synthase alp 84.1 5.1 0.00017 36.4 9.6 45 196-240 83-133 (268)
485 4dpp_A DHDPS 2, dihydrodipicol 84.0 2.7 9.3E-05 40.2 7.9 87 150-244 78-169 (360)
486 3nvt_A 3-deoxy-D-arabino-heptu 83.8 31 0.0011 33.0 16.1 133 74-243 153-291 (385)
487 3lg3_A Isocitrate lyase; conse 83.7 24 0.00084 34.3 14.5 157 65-242 153-358 (435)
488 3fkr_A L-2-keto-3-deoxyarabona 83.7 2.4 8.1E-05 39.6 7.2 83 150-240 27-114 (309)
489 2q02_A Putative cytoplasmic pr 83.4 5.9 0.0002 35.1 9.6 149 66-234 8-166 (272)
490 3e96_A Dihydrodipicolinate syn 83.3 1.8 6.1E-05 40.6 6.2 85 150-243 31-120 (316)
491 3txv_A Probable tagatose 6-pho 83.0 13 0.00043 36.5 12.2 73 161-240 210-293 (450)
492 3flu_A DHDPS, dihydrodipicolin 83.0 28 0.00097 31.9 26.5 153 62-256 74-230 (297)
493 1f76_A Dihydroorotate dehydrog 82.7 11 0.00037 35.2 11.6 100 64-173 211-318 (336)
494 3tqp_A Enolase; energy metabol 82.6 12 0.00042 36.4 12.2 101 118-235 217-336 (428)
495 1xky_A Dihydrodipicolinate syn 82.5 30 0.001 31.8 27.4 153 62-256 79-235 (301)
496 1ep3_A Dihydroorotate dehydrog 82.5 6.6 0.00023 36.0 9.9 104 123-235 86-195 (311)
497 3qfe_A Putative dihydrodipicol 82.4 3.2 0.00011 38.9 7.7 84 150-241 30-118 (318)
498 1tx2_A DHPS, dihydropteroate s 82.4 1.3 4.5E-05 41.2 4.8 60 76-140 62-121 (297)
499 3qn3_A Enolase; structural gen 82.4 8.3 0.00028 37.6 10.8 70 150-235 262-334 (417)
500 3obe_A Sugar phosphate isomera 82.3 6.8 0.00023 36.0 9.8 37 63-99 19-58 (305)
No 1
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=100.00 E-value=4.6e-59 Score=454.89 Aligned_cols=315 Identities=35% Similarity=0.625 Sum_probs=264.8
Q ss_pred ecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCCCCEEEEecCCCHHHHHHHHHH
Q 017176 6 YLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAKATEL 85 (376)
Q Consensus 6 ~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~~~~~~~aa~~ 85 (376)
.++||+++|||+++||.+||++++++||+|+++|||++++.+++.+. .+++++++.+.|+++||+|++|++|+++|++
T Consensus 1 ~l~nriv~APM~g~td~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~--~~~~~~~~~~~p~~vQL~g~~p~~~~~aA~~ 78 (350)
T 3b0p_A 1 MLDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNR--ERLLAFRPEEHPIALQLAGSDPKSLAEAARI 78 (350)
T ss_dssp -CCCSEEECCCTTTSSHHHHHHHHHHCSSSBEECCCEEHHHHHHSCH--HHHHCCCGGGCSEEEEEECSCHHHHHHHHHH
T ss_pred CCCCCEEECCCCCCCHHHHHHHHHHcCCCCEEEeCCEEechhhcCCH--HHHhccCCCCCeEEEEeCCCCHHHHHHHHHH
Confidence 37999999999999999999999999999999999999998766553 3566788899999999999999999999999
Q ss_pred HHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcC
Q 017176 86 ANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLS 165 (376)
Q Consensus 86 ~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~ 165 (376)
++++|||+||||+|||.+++ ++++||++|+++++++.++++++++.+++||++|+|+||++..+.+++.++ ++.++++
T Consensus 79 a~~~G~D~IeIn~gcP~~~~-~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~-a~~l~~a 156 (350)
T 3b0p_A 79 GEAFGYDEINLNLGCPSEKA-QEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQS-VEAMAEA 156 (350)
T ss_dssp HHHTTCSEEEEEECCCSHHH-HHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHH-HHHHHHT
T ss_pred HHHcCCCEEEECCcCCCCcC-cCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHH-HHHHHHc
Confidence 99999999999999999864 567899999999999999999999989999999999999886665555554 4566789
Q ss_pred CccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCch
Q 017176 166 PTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 166 Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
|+|+|+||+|+... |.++..++..++..|+++.++++.++++|||+||||.|++|+.++++ |||+|||||+++.|||+
T Consensus 157 G~d~I~V~~r~~~~-g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~iGRa~l~~P~l 234 (350)
T 3b0p_A 157 GVKVFVVHARSALL-ALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVMLGRAVYEDPFV 234 (350)
T ss_dssp TCCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEEECHHHHHCGGG
T ss_pred CCCEEEEecCchhc-ccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEEECHHHHhCcHH
Confidence 99999999998642 33333333455677999999988766899999999999999999998 99999999999999999
Q ss_pred hhHhhhhhhhCCCCCcccHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHhhcCCCCChHHHHHHHHHHhhhhhHHH
Q 017176 246 TLGHVDTAIYGAPSSGLTRRQVVEKYQIYGDAILGTYGNNRPHVRDVMKPLLHFFHSEPGNGLFKRKADAAFQTCKTVKS 325 (376)
Q Consensus 246 f~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~y~~~~~~~~~~r~~~~~~~~~~~~~~~ 325 (376)
| .++...++| +.+..++.++++.|++|.+.+++ +|+ .++.+|||+.||++|+|++++||+.+++. .+.+.+.+
T Consensus 235 ~-~~i~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~-~g~---~~~~~~kh~~~~~~g~~~~~~~r~~l~~~-~~~~~~~~ 307 (350)
T 3b0p_A 235 L-EEADRRVFG-LPRRPSRLEVARRMRAYLEEEVL-KGT---PPWAVLRHMLNLFRGRPKGRLWRRLLSEG-RSLQALDR 307 (350)
T ss_dssp G-TTHHHHTTC-CSCCCCHHHHHHHHHHHHHHHHH-HTC---CHHHHHTTSTTTTTTSTTHHHHHHHHHHH-CSHHHHHH
T ss_pred H-HHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHH-cCc---cHHHHHHHHHHHHccCCCHHHHHHHHHCC-CCHHHHHH
Confidence 6 556655666 44557889999999999988777 565 48899999999999999999999998665 66677777
Q ss_pred HHHHHHHh
Q 017176 326 FLEETIVA 333 (376)
Q Consensus 326 ~~~~~~~~ 333 (376)
+++++...
T Consensus 308 ~l~~~~~~ 315 (350)
T 3b0p_A 308 ALRLMEEE 315 (350)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhh
Confidence 77665433
No 2
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=100.00 E-value=6.3e-55 Score=420.98 Aligned_cols=306 Identities=22% Similarity=0.361 Sum_probs=250.7
Q ss_pred eecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCCCCEEEEecCCCHHHHHHHHH
Q 017176 5 QYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAKATE 84 (376)
Q Consensus 5 ~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~~~~~~~aa~ 84 (376)
++++||+++|||+++|+.+||.++++.| +|+++|||++++.+.+......+.+ +++.+.|+++||+|++|++|+++|+
T Consensus 1 ~~l~nri~~APM~~~t~~~~r~~~~~~G-~gli~te~~~~~~~~~~~~~~~~~l-~~~~~~~~~~QL~g~~~~~~~~aa~ 78 (318)
T 1vhn_A 1 MSLEVKVGLAPMAGYTDSAFRTLAFEWG-ADFAFSEMVSAKGFLMNSQKTEELL-PQPHERNVAVQIFGSEPNELSEAAR 78 (318)
T ss_dssp ----CEEEECCCTTTCSHHHHHHHHTTT-CCCEECSCEEHHHHHTTCHHHHHHS-CCTTCTTEEEEEECSCHHHHHHHHH
T ss_pred CccCCCEEECCCCCCCcHHHHHHHHHHC-cCEEEeCCEEEcccccCCHhHHHhh-hCcCCCeEEEEeCCCCHHHHHHHHH
Confidence 4689999999999999999999998876 6999999999998776655555555 8889999999999999999999999
Q ss_pred HHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhc
Q 017176 85 LANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSL 164 (376)
Q Consensus 85 ~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~ 164 (376)
+++++ ||+||||+|||.++ .++++||++|++|++++.++++++++.+++||+||+|+||++.+.. ++ ++.+++
T Consensus 79 ~a~~~-~d~Iein~gcP~~~-~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~~-~~----a~~l~~ 151 (318)
T 1vhn_A 79 ILSEK-YKWIDLNAGCPVRK-VVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVE-EI----YRILVE 151 (318)
T ss_dssp HHTTT-CSEEEEEECCCCHH-HHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHH-HH----HHHHHH
T ss_pred HHHHh-CCEEEEECCCCcHh-cCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHHHH-HH----HHHHHH
Confidence 99999 99999999999976 4568899999999999999999999999999999999999875433 33 445678
Q ss_pred CCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcCeeEEchHHhhCC
Q 017176 165 SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNP 243 (376)
Q Consensus 165 ~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad~VmiGRa~l~~P 243 (376)
+|+|+|+||+|+... +.++ +..|+.+.++++ ++|||+||||.|++|+.++++ +|||+||+||+++.||
T Consensus 152 ~G~d~i~v~g~~~~~-~~~~-------~~~~~~i~~i~~---~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P 220 (318)
T 1vhn_A 152 EGVDEVFIHTRTVVQ-SFTG-------RAEWKALSVLEK---RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRP 220 (318)
T ss_dssp TTCCEEEEESSCTTT-TTSS-------CCCGGGGGGSCC---SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCT
T ss_pred hCCCEEEEcCCCccc-cCCC-------CcCHHHHHHHHc---CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCc
Confidence 999999999998632 2111 223555555543 899999999999999999999 8999999999999999
Q ss_pred chhhHhhhhhhh-CCCCCcccHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHhhcCCCCChHHHHHHHHHHhhhhh
Q 017176 244 WYTLGHVDTAIY-GAPSSGLTRRQVVEKYQIYGDAILGTYGNNRPHVRDVMKPLLHFFHSEPGNGLFKRKADAAFQTCKT 322 (376)
Q Consensus 244 ~lf~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~y~~~~~~~~~~r~~~~~~~~~~~~ 322 (376)
|+| ..+...++ | +.+..++.++++.+.+|.+..++++|. +.++..+|||+.||+++++++++||+++++. ++..+
T Consensus 221 ~l~-~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~ 296 (318)
T 1vhn_A 221 WIF-KQIKDFLRSG-KYSEPSREEILRTFERHLELLIKTKGE-RKAVVEMRKFLAGYTKDLKGARRFREKVMKI-EEVQI 296 (318)
T ss_dssp THH-HHHHHHHHHS-CCCCCCHHHHHHHHHHHHHHHHHHHCH-HHHHHHHHTTHHHHTTTCTTHHHHHHHHTTC-CCHHH
T ss_pred chH-HHHHHHHhCC-CCCCCCHHHHHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHhcCCChHHHHHHHHcC-CCHHH
Confidence 997 44544343 6 333456677777777888878888885 5689999999999999999999999988543 66677
Q ss_pred HHHHHHHHHHhC
Q 017176 323 VKSFLEETIVAI 334 (376)
Q Consensus 323 ~~~~~~~~~~~~ 334 (376)
+.++++++++..
T Consensus 297 ~~~~~~~~~~~~ 308 (318)
T 1vhn_A 297 LKEMFYNFIKEV 308 (318)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 777777766544
No 3
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=100.00 E-value=1.4e-37 Score=302.02 Aligned_cols=239 Identities=15% Similarity=0.189 Sum_probs=186.5
Q ss_pred CCCeecCCcEEEccCCCC---------ChHHHHHHH-HHhCCCcEEEecceeeccccc---------ccchhh---hhh-
Q 017176 2 VARQYLPPWFSVAPMMDW---------TDNHYRTLA-RLISKHAWLYTEMLAAETIIY---------QQGNLD---RFL- 58 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~---------td~~~r~~~-~~~Gg~gl~~te~v~~~~~~~---------~~~~~~---~~~- 58 (376)
||+++|||||++|||+++ |+..+++|. ++.||+|+++||+++++.... .+..+. ++.
T Consensus 11 ig~~~l~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~~~~ 90 (338)
T 1z41_A 11 IKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTE 90 (338)
T ss_dssp ETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHHHH
T ss_pred ECCEEEcCccEECCcCCCcCCCCCCCCCHHHHHHHHHHHcCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHHHHH
Confidence 689999999999999865 566778875 566889999999998864321 112221 222
Q ss_pred ccCCCCCCEEEEecCC-----------------------C------------HHHHHHHHHHHHHCCCCEEEecCCC---
Q 017176 59 AFSPEQHPIVLQIGGS-----------------------N------------LDNLAKATELANAYNYDEINLNCGC--- 100 (376)
Q Consensus 59 ~~~~~~~p~~vQL~g~-----------------------~------------~~~~~~aa~~~~~~G~d~IeiN~gc--- 100 (376)
.+|..+.++++||+|. . +++|++||++++++|||+||||++|
T Consensus 91 ~vh~~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyL 170 (338)
T 1z41_A 91 QVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYL 170 (338)
T ss_dssp HHHHTTCEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSH
T ss_pred HHHhcCCEEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchH
Confidence 3678899999999973 2 2789999999999999999999997
Q ss_pred ------CCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCC--CCCccHHHHHHHHHHHhhcCCccEEEE
Q 017176 101 ------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGV--DDHDSYNQLCDFIYKVSSLSPTRHFII 172 (376)
Q Consensus 101 ------P~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~--~~~~~~~~~~~~i~~~~e~~Gvd~I~v 172 (376)
|.. +.|+|+||++++||++++.|++++|++.+++||+||++..- ....+.++..+ +++.+++.|+|+|+|
T Consensus 171 l~qFlsp~~-n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~~~~~~-~a~~l~~~Gvd~i~v 248 (338)
T 1z41_A 171 IHEFLSPLS-NHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIG-FAKWMKEQGVDLIDC 248 (338)
T ss_dssp HHHHHCTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHH-HHHHHHHTTCCEEEE
T ss_pred HHHccCCCc-CCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCCHHHHHH-HHHHHHHcCCCEEEE
Confidence 775 47899999999999999999999999999999999999831 11123445444 355677899999999
Q ss_pred ccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcC-cCeeEEchHHhhCCchhhH
Q 017176 173 HSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHHVMVGRAAYQNPWYTLG 248 (376)
Q Consensus 173 h~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~G-ad~VmiGRa~l~~P~lf~~ 248 (376)
|+++...... + .-+...++.+.++++.+ ++|||++|||.|+++++++++.| ||+|++||+++.||+|+.+
T Consensus 249 ~~~~~~~~~~-~----~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~nPdl~~k 319 (338)
T 1z41_A 249 SSGALVHADI-N----VFPGYQVSFAEKIREQA-DMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRDPFFART 319 (338)
T ss_dssp ECCCSSCCCC-C----CCTTTTHHHHHHHHHHH-CCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHCTTHHHH
T ss_pred ecCccccCCC-C----CCccchHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHhCchHHHH
Confidence 9886321100 0 01122467777887765 89999999999999999999966 9999999999999999643
No 4
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=100.00 E-value=7.6e-37 Score=296.69 Aligned_cols=239 Identities=15% Similarity=0.167 Sum_probs=185.2
Q ss_pred CCCeecCCcEEEccCCC---------CChHHHHHHH-HHhCCCcEEEecceeecccccc---------cchhhh---hh-
Q 017176 2 VARQYLPPWFSVAPMMD---------WTDNHYRTLA-RLISKHAWLYTEMLAAETIIYQ---------QGNLDR---FL- 58 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~---------~td~~~r~~~-~~~Gg~gl~~te~v~~~~~~~~---------~~~~~~---~~- 58 (376)
||+++|||||++|||.. .|+....+|. |+.||+|+++||.+.+...... +..+.. +.
T Consensus 11 ig~~~l~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~ 90 (340)
T 3gr7_A 11 IRGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLRELVG 90 (340)
T ss_dssp ETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECSSTTHHHHHHHHHH
T ss_pred ECCEEEcCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCCCCcccCCHHHHHHHHHHHH
Confidence 68999999999999964 4677888886 6779999999999887743221 122222 22
Q ss_pred ccCCCCCCEEEEecCCC-----------------------------------HHHHHHHHHHHHHCCCCEEEecCCC---
Q 017176 59 AFSPEQHPIVLQIGGSN-----------------------------------LDNLAKATELANAYNYDEINLNCGC--- 100 (376)
Q Consensus 59 ~~~~~~~p~~vQL~g~~-----------------------------------~~~~~~aa~~~~~~G~d~IeiN~gc--- 100 (376)
.+|..+.++++||++.. .++|++||++++++|||+||||++|
T Consensus 91 ~vh~~G~~i~~QL~H~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyL 170 (340)
T 3gr7_A 91 LVKEHGAAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYL 170 (340)
T ss_dssp HHHHTTCEEEEEEECCGGGCCSSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCH
T ss_pred HHHhCCCeEEEEeccCCCccCCCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchH
Confidence 36888999999997521 3799999999999999999999995
Q ss_pred ------CCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCC--CCccHHHHHHHHHHHhhcCCccEEEE
Q 017176 101 ------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVD--DHDSYNQLCDFIYKVSSLSPTRHFII 172 (376)
Q Consensus 101 ------P~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~--~~~~~~~~~~~i~~~~e~~Gvd~I~v 172 (376)
|.. +.|+|+||++++||++++.||+++||+.+++||+||++..-. ...+.++..+ +++.++++|+|+|+|
T Consensus 171 l~qFlsp~~-N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~-la~~L~~~Gvd~i~v 248 (340)
T 3gr7_A 171 INEFLSPLS-NRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVP-YAKRMKEQGVDLVDV 248 (340)
T ss_dssp HHHHHCTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHH-HHHHHHHTTCCEEEE
T ss_pred HHHcCCCcc-CcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHHH-HHHHHHHcCCCEEEE
Confidence 876 478999999999999999999999999999999999998410 0112333333 355667899999999
Q ss_pred ccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcC-cCeeEEchHHhhCCchhhH
Q 017176 173 HSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHHVMVGRAAYQNPWYTLG 248 (376)
Q Consensus 173 h~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~G-ad~VmiGRa~l~~P~lf~~ 248 (376)
|.+...... ...-+...++.++++++.+ ++|||++|||.|+++++++++.| ||+|++||+++.||+|+.+
T Consensus 249 s~g~~~~~~-----~~~~~~~~~~~~~~ik~~~-~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~k 319 (340)
T 3gr7_A 249 SSGAIVPAR-----MNVYPGYQVPFAELIRREA-DIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYA 319 (340)
T ss_dssp ECCCSSCCC-----CCCCTTTTHHHHHHHHHHT-TCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHH
T ss_pred ecCCccCCC-----CCCCccccHHHHHHHHHHc-CCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHH
Confidence 964321100 0011223477778887775 89999999999999999999966 9999999999999999643
No 5
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=100.00 E-value=8.4e-37 Score=300.00 Aligned_cols=233 Identities=13% Similarity=0.075 Sum_probs=183.8
Q ss_pred CCCeecCCcEEEccCCCC-------ChHHHHHHHHHhCCCcEEEecceeecccccc---------cchhh---hhh-ccC
Q 017176 2 VARQYLPPWFSVAPMMDW-------TDNHYRTLARLISKHAWLYTEMLAAETIIYQ---------QGNLD---RFL-AFS 61 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~-------td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~---------~~~~~---~~~-~~~ 61 (376)
||+++|||||++|||++. |+..+++|++++| +|+++||+++++..... +.++. ++. .+|
T Consensus 17 ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~~y~~rA~-~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~~avh 95 (377)
T 2r14_A 17 LGSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRAS-AGLIISEATNISPTARGYVYTPGIWTDAQEAGWKGVVEAVH 95 (377)
T ss_dssp ETTEEESCSEEECCCCCCCCTTSCCCHHHHHHHHHTTT-SSCEEEEEEESSGGGCCBTTCCBSSSHHHHHHHHHHHHHHH
T ss_pred ECCEEecCCeEECCCcCCcCCCCCCCHHHHHHHHHHhc-CCEEEEcceeeccccccCCCCcccCCHHHHHHHHHHHHHHh
Confidence 688999999999999976 8999999998886 89999999998733221 11221 222 368
Q ss_pred CCCCCEEEEecCC-------------------------------------------CH------------HHHHHHHHHH
Q 017176 62 PEQHPIVLQIGGS-------------------------------------------NL------------DNLAKATELA 86 (376)
Q Consensus 62 ~~~~p~~vQL~g~-------------------------------------------~~------------~~~~~aa~~~ 86 (376)
..+.++++||+|. .| ++|++||+++
T Consensus 96 ~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~aA~~a 175 (377)
T 2r14_A 96 AKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDYRQAAQRA 175 (377)
T ss_dssp HTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHHHHHH
T ss_pred hcCCeEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence 8899999999861 22 7999999999
Q ss_pred HHCCCCEEEecCCC---------CCccccCCCCccccccCCHHHHHHHHHHHhcccCc-cEEEEecCC-CC----CCccH
Q 017176 87 NAYNYDEINLNCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNV-PVSVKCRIG-VD----DHDSY 151 (376)
Q Consensus 87 ~~~G~d~IeiN~gc---------P~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~-pv~vKiR~g-~~----~~~~~ 151 (376)
+++|||+||||++| |.. +.|+|+||++++||++++.||+++||+.++. ||+||++.. +. +..+.
T Consensus 176 ~~aGfDgVEIh~a~GYLl~QFlsp~~-N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~~~ 254 (377)
T 2r14_A 176 KRAGFDMVEVHAANACLPNQFLATGT-NRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDEPE 254 (377)
T ss_dssp HHHTCSEEEEEECTTCHHHHHHSTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSCHH
T ss_pred HHcCCCEEEEcCcccchHHhccCCcc-ccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCCCCCH
Confidence 99999999999997 875 4789999999999999999999999999853 999999985 11 12334
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHc-Cc
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GA 230 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~-Ga 230 (376)
++..+ +++.++++|+|+|+||+|+... ... .. .++.++++++.+ ++|||+|||| ++++++++++. +|
T Consensus 255 ~~~~~-la~~le~~Gvd~i~v~~~~~~~-~~~------~~--~~~~~~~ik~~~-~iPvi~~Ggi-~~~~a~~~l~~g~a 322 (377)
T 2r14_A 255 AMAFY-LAGELDRRGLAYLHFNEPDWIG-GDI------TY--PEGFREQMRQRF-KGGLIYCGNY-DAGRAQARLDDNTA 322 (377)
T ss_dssp HHHHH-HHHHHHHTTCSEEEEECCC-------------CC--CTTHHHHHHHHC-CSEEEEESSC-CHHHHHHHHHTTSC
T ss_pred HHHHH-HHHHHHHcCCCEEEEeCCcccC-CCC------cc--hHHHHHHHHHHC-CCCEEEECCC-CHHHHHHHHHCCCc
Confidence 55544 4567788999999999976311 110 01 255667777765 8999999999 79999999995 59
Q ss_pred CeeEEchHHhhCCchhhH
Q 017176 231 HHVMVGRAAYQNPWYTLG 248 (376)
Q Consensus 231 d~VmiGRa~l~~P~lf~~ 248 (376)
|+||+||+++.||||+.+
T Consensus 323 D~V~igR~~l~~P~l~~k 340 (377)
T 2r14_A 323 DAVAFGRPFIANPDLPER 340 (377)
T ss_dssp SEEEESHHHHHCTTHHHH
T ss_pred eEEeecHHHHhCchHHHH
Confidence 999999999999999743
No 6
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=100.00 E-value=2e-36 Score=296.30 Aligned_cols=232 Identities=14% Similarity=0.155 Sum_probs=184.8
Q ss_pred CCCeecCCcEEEccCCCC---------ChHHHHHHHHHhCCCcEEEecceeecccc--c-------ccchhh---hhh-c
Q 017176 2 VARQYLPPWFSVAPMMDW---------TDNHYRTLARLISKHAWLYTEMLAAETII--Y-------QQGNLD---RFL-A 59 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~---------td~~~r~~~~~~Gg~gl~~te~v~~~~~~--~-------~~~~~~---~~~-~ 59 (376)
||+++|||||++|||++. |+..+++|++++| +|+++||+++++... . .+.++. ++. .
T Consensus 11 ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg-~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~~~ 89 (364)
T 1vyr_A 11 VGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRAS-AGLIISEATQISAQAKGYAGAPGLHSPEQIAAWKKITAG 89 (364)
T ss_dssp ETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTT-SSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHHHHHHHH
T ss_pred ECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHhc-CCEEEEccccccccccCCCCCcccCCHHHHHHHHHHHHH
Confidence 688999999999999864 6889999998875 899999999987322 1 112221 222 3
Q ss_pred cCCCCCCEEEEecC------------------------------------------CCH------------HHHHHHHHH
Q 017176 60 FSPEQHPIVLQIGG------------------------------------------SNL------------DNLAKATEL 85 (376)
Q Consensus 60 ~~~~~~p~~vQL~g------------------------------------------~~~------------~~~~~aa~~ 85 (376)
+|..+.++++||++ ..| ++|+++|++
T Consensus 90 vh~~g~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA~~ 169 (364)
T 1vyr_A 90 VHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVNDFRQAVAN 169 (364)
T ss_dssp HHHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHHHHH
T ss_pred HHhcCCeEEEEeccCCcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHH
Confidence 68889999999985 122 799999999
Q ss_pred HHHCCCCEEEecCCC---------CCccccCCCCccccccCCHHHHHHHHHHHhcccC-ccEEEEecCC--CCC----Cc
Q 017176 86 ANAYNYDEINLNCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIG--VDD----HD 149 (376)
Q Consensus 86 ~~~~G~d~IeiN~gc---------P~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~-~pv~vKiR~g--~~~----~~ 149 (376)
++++|||+||||++| |.. +.|+|+||++++||++++.||+++||+.++ .||+||++.+ +.+ ..
T Consensus 170 a~~aGfDgVeih~a~GyLl~qFlsp~~-N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~~ 248 (364)
T 1vyr_A 170 AREAGFDLVELHSAHGYLLHQFLSPSS-NQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPN 248 (364)
T ss_dssp HHHTTCSEEEEEECTTSHHHHHHCTTT-CCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCTT
T ss_pred HHHcCCCEEEEcCccchHHHhccCCcc-cccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccccccCCCC
Confidence 999999999999997 764 478899999999999999999999999984 3999999986 432 22
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcC
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG 229 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~G 229 (376)
+.++..+ +++.+++.|+|+|++|+++... + ++..++.++++++.+ ++|||+||+| ++++++++++.|
T Consensus 249 ~~~~~~~-~a~~l~~~G~d~i~v~~~~~~~-~---------~~~~~~~~~~v~~~~-~iPvi~~Ggi-t~~~a~~~l~~g 315 (364)
T 1vyr_A 249 EEADALY-LIEELAKRGIAYLHMSETDLAG-G---------KPYSEAFRQKVRERF-HGVIIGAGAY-TAEKAEDLIGKG 315 (364)
T ss_dssp HHHHHHH-HHHHHHHTTCSEEEEECCBTTB-C---------CCCCHHHHHHHHHHC-CSEEEEESSC-CHHHHHHHHHTT
T ss_pred CHHHHHH-HHHHHHHhCCCEEEEecCcccC-C---------CcccHHHHHHHHHHC-CCCEEEECCc-CHHHHHHHHHCC
Confidence 4555544 4567788999999999875311 1 112366777777765 8999999999 999999999954
Q ss_pred -cCeeEEchHHhhCCchhhH
Q 017176 230 -AHHVMVGRAAYQNPWYTLG 248 (376)
Q Consensus 230 -ad~VmiGRa~l~~P~lf~~ 248 (376)
||+||+||+++.||||+.+
T Consensus 316 ~aD~V~~gR~~l~~P~~~~~ 335 (364)
T 1vyr_A 316 LIDAVAFGRDYIANPDLVAR 335 (364)
T ss_dssp SCSEEEESHHHHHCTTHHHH
T ss_pred CccEEEECHHHHhChhHHHH
Confidence 9999999999999999743
No 7
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=100.00 E-value=4.1e-36 Score=291.33 Aligned_cols=237 Identities=16% Similarity=0.205 Sum_probs=185.0
Q ss_pred CCCeecCCcEEEccCCC--------CChHHHHHHH-HHhCCCcEEEecceeeccccccc---------chhhh---hh-c
Q 017176 2 VARQYLPPWFSVAPMMD--------WTDNHYRTLA-RLISKHAWLYTEMLAAETIIYQQ---------GNLDR---FL-A 59 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~--------~td~~~r~~~-~~~Gg~gl~~te~v~~~~~~~~~---------~~~~~---~~-~ 59 (376)
||+++|||||++|||+. .|+....+|. |+.||+|+++||.+.+....... ..+.. +. .
T Consensus 10 ig~~~l~NRiv~apm~~~~~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i~~~~~~~~~ 89 (343)
T 3kru_A 10 IKDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKKIVDI 89 (343)
T ss_dssp ETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHHHHHHHHHH
T ss_pred eeeeeeeeeecccchhheecccCCCCCceeeeeeehhhccceeeeeehhhhhhhcCccccccccccCHHHHHHHHHHHHH
Confidence 68899999999999975 4778888886 67799999999998887432211 11222 22 2
Q ss_pred cCCCCCCEEEEecCCC------------------------------------HHHHHHHHHHHHHCCCCEEEec------
Q 017176 60 FSPEQHPIVLQIGGSN------------------------------------LDNLAKATELANAYNYDEINLN------ 97 (376)
Q Consensus 60 ~~~~~~p~~vQL~g~~------------------------------------~~~~~~aa~~~~~~G~d~IeiN------ 97 (376)
+|..+.++++||++.. .++|++||++++++|||+||||
T Consensus 90 vh~~G~~i~~QL~H~Gr~~~~~g~~~~apS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYL 169 (343)
T 3kru_A 90 CKANGAVMGIQLAHAGRKCNISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYL 169 (343)
T ss_dssp HHHTTCEEEEEEECCGGGCCCTTSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSH
T ss_pred HhcCCceEeeehhhccCccCcchhhccCCCcCCCCccccCchhcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchh
Confidence 6788999999997520 3799999999999999999999
Q ss_pred ---CCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCC-CCC-CccHHHHHHHHHHHhhcCCccEE
Q 017176 98 ---CGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIG-VDD-HDSYNQLCDFIYKVSSLSPTRHF 170 (376)
Q Consensus 98 ---~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g-~~~-~~~~~~~~~~i~~~~e~~Gvd~I 170 (376)
|.||.. +.|+|+||++++||++++.||+++||+.+ ++||+||++.. +.+ ..+.++..++ ++.++++ +|+|
T Consensus 170 l~qFlsp~~-N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~~-a~~l~~~-vd~i 246 (343)
T 3kru_A 170 IHEFLSPLS-NKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEY-INMIKDK-VDLI 246 (343)
T ss_dssp HHHHHCTTT-CCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHH-HHHHTTT-CSEE
T ss_pred HHHhhcccc-cccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHHH-HHHhhcc-ccEE
Confidence 569996 47899999999999999999999999998 68999999983 322 2345566554 5667788 9999
Q ss_pred EE-ccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcC-cCeeEEchHHhhCCchhhH
Q 017176 171 II-HSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHHVMVGRAAYQNPWYTLG 248 (376)
Q Consensus 171 ~v-h~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~G-ad~VmiGRa~l~~P~lf~~ 248 (376)
+| |+++..... ...+...++++.++++.+ ++|||++|+|.|+++++++++.| ||+|++||+++.||||+.+
T Consensus 247 ~vs~g~~~~~~~------~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~lanPdl~~k 319 (343)
T 3kru_A 247 DVSSGGLLNVDI------NLYPGYQVKYAETIKKRC-NIKTSAVGLITTQELAEEILSNERADLVALGRELLRNPYWVLH 319 (343)
T ss_dssp EEECCCSSCCCC------CCCTTTTHHHHHHHHHHH-TCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHH
T ss_pred eccCCceEeeee------cccCceeehHHHHHHHhc-CcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhcCCeEEEE
Confidence 99 565432100 001122467777777765 89999999999999999999955 9999999999999999743
No 8
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=100.00 E-value=3.5e-36 Score=294.73 Aligned_cols=231 Identities=15% Similarity=0.103 Sum_probs=183.7
Q ss_pred CCCeecCCcEEEccCCCC---------ChHHHHHHHHHhCCCcEEEecceeecccccc---------cchhh---hhh-c
Q 017176 2 VARQYLPPWFSVAPMMDW---------TDNHYRTLARLISKHAWLYTEMLAAETIIYQ---------QGNLD---RFL-A 59 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~---------td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~---------~~~~~---~~~-~ 59 (376)
||+++|+|||++|||++. |+..+++|++++| +|+++||+++++..... +.++. ++. .
T Consensus 11 ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~-~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~~~ 89 (365)
T 2gou_A 11 LGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRAS-AGLIVSEGTQISPTAKGYAWTPGIYTPEQIAGWRIVTEA 89 (365)
T ss_dssp ETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTT-SSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHHHHHH
T ss_pred ECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhc-CCEEEECceeecccccCCCCCCccCCHHHHHHHHHHHHH
Confidence 689999999999999876 4788999998776 89999999988733211 11221 222 2
Q ss_pred cCCCCCCEEEEecC------------------------------------------CCH------------HHHHHHHHH
Q 017176 60 FSPEQHPIVLQIGG------------------------------------------SNL------------DNLAKATEL 85 (376)
Q Consensus 60 ~~~~~~p~~vQL~g------------------------------------------~~~------------~~~~~aa~~ 85 (376)
+|..+.++++||++ ..| ++|+++|++
T Consensus 90 vh~~g~~i~~QL~H~Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA~~ 169 (365)
T 2gou_A 90 VHAKGCAIFAQLWHVGRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQVIADYRQAALN 169 (365)
T ss_dssp HHHHSCEEEEEEECCTTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCeEEEEeecCCCcccccccCCCCccCCCCccccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHH
Confidence 67889999999985 112 799999999
Q ss_pred HHHCCCCEEEecCCC---------CCccccCCCCccccccCCHHHHHHHHHHHhcccCc-cEEEEecC-CCC----CCcc
Q 017176 86 ANAYNYDEINLNCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNV-PVSVKCRI-GVD----DHDS 150 (376)
Q Consensus 86 ~~~~G~d~IeiN~gc---------P~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~-pv~vKiR~-g~~----~~~~ 150 (376)
++++|||+||||++| |.. +.|+|+||++++||++++.||+++||+.++. ||+||++. ++. +..+
T Consensus 170 a~~aGfDgVeih~a~gYLl~qFlsp~~-N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~ 248 (365)
T 2gou_A 170 AMEAGFDGIELHAANGYLINQFIDSEA-NNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADP 248 (365)
T ss_dssp HHHTTCSEEEEECCTTSHHHHHHSGGG-CCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSH
T ss_pred HHHcCCCEEEEecccchhHhhccCCCc-cCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCCCCCC
Confidence 999999999999998 765 5789999999999999999999999998853 99999998 331 2234
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcC-
Q 017176 151 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG- 229 (376)
Q Consensus 151 ~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~G- 229 (376)
.++..+ +++.+++.|+|+|++|+++. .+. . ...++.++++++.+ ++|||+|||| |+++++++++.|
T Consensus 249 ~~~~~~-~a~~l~~~G~d~i~v~~~~~--~~~--~------~~~~~~~~~i~~~~-~iPvi~~Ggi-~~~~a~~~l~~g~ 315 (365)
T 2gou_A 249 ILTYTA-AAALLNKHRIVYLHIAEVDW--DDA--P------DTPVSFKRALREAY-QGVLIYAGRY-NAEKAEQAINDGL 315 (365)
T ss_dssp HHHHHH-HHHHHHHTTCSEEEEECCBT--TBC--C------CCCHHHHHHHHHHC-CSEEEEESSC-CHHHHHHHHHTTS
T ss_pred HHHHHH-HHHHHHHcCCCEEEEeCCCc--CCC--C------CccHHHHHHHHHHC-CCcEEEeCCC-CHHHHHHHHHCCC
Confidence 555554 45667889999999998763 111 0 11256677777765 8999999999 999999999955
Q ss_pred cCeeEEchHHhhCCchhh
Q 017176 230 AHHVMVGRAAYQNPWYTL 247 (376)
Q Consensus 230 ad~VmiGRa~l~~P~lf~ 247 (376)
||+||+||+++.||||+.
T Consensus 316 aD~V~igR~~i~~P~l~~ 333 (365)
T 2gou_A 316 ADMIGFGRPFIANPDLPE 333 (365)
T ss_dssp CSEEECCHHHHHCTTHHH
T ss_pred cceehhcHHHHhCchHHH
Confidence 999999999999999964
No 9
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=100.00 E-value=1.3e-35 Score=293.64 Aligned_cols=241 Identities=15% Similarity=0.120 Sum_probs=182.7
Q ss_pred CCCeecCCcEEEccCCCC-------ChHHHHHHHHHhCCCcEEEecceeeccccc---------ccchhh---hhh-ccC
Q 017176 2 VARQYLPPWFSVAPMMDW-------TDNHYRTLARLISKHAWLYTEMLAAETIIY---------QQGNLD---RFL-AFS 61 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~-------td~~~r~~~~~~Gg~gl~~te~v~~~~~~~---------~~~~~~---~~~-~~~ 61 (376)
||+++|||||++|||++. |+....+|.+.+.|+|+++||++.++.... .+..+. ++. .+|
T Consensus 24 ig~~~L~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~G~GLIitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~~avh 103 (402)
T 2hsa_B 24 MGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAGFPHVPGIFTKEQVREWKKIVDVVH 103 (402)
T ss_dssp ETTEEESCSEEECCCCCCCSGGGCCCHHHHHHHHHHCCTTCEEECCCEESSTTCCCSTTCCBCSSHHHHHHHHHHHHHHH
T ss_pred ECCEEecCCeEECCCCCCcCCCCCCCHHHHHHHHHHhccCCEEEecceeeccccccCCCCcccCCHHHHHHHHHHHHHHH
Confidence 688999999999999864 567777776433339999999999873221 112221 222 368
Q ss_pred CCCCCEEEEecC----------------------------------------CCH------------HHHHHHHHHHHHC
Q 017176 62 PEQHPIVLQIGG----------------------------------------SNL------------DNLAKATELANAY 89 (376)
Q Consensus 62 ~~~~p~~vQL~g----------------------------------------~~~------------~~~~~aa~~~~~~ 89 (376)
..+.++++||++ ..| ++|++||++++++
T Consensus 104 ~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~v~~~~~~~~~~~~g~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~A 183 (402)
T 2hsa_B 104 AKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQVVEDYRRSALNAIEA 183 (402)
T ss_dssp HTTCEEEEEEECCTTSCCGGGCTTCCCCEESCSCCCCTTCEEECTTSCEEECCCCEECCGGGHHHHHHHHHHHHHHHHHT
T ss_pred hcCCeEEEEeccCCcccccccccCCCccccCCCcccccccccccccccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHc
Confidence 889999999985 123 7999999999999
Q ss_pred CCCEEEecCCC---------CCccccCCCCccccccCCHHHHHHHHHHHhcccC-ccEEEEecCC-C----CCCccHHHH
Q 017176 90 NYDEINLNCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIG-V----DDHDSYNQL 154 (376)
Q Consensus 90 G~d~IeiN~gc---------P~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~-~pv~vKiR~g-~----~~~~~~~~~ 154 (376)
|||+||||++| |.. +.|+|+||++++||++++.|||++||+.++ .||+||++.+ + ++..+.++.
T Consensus 184 GfDgVEIh~ahGYLl~QFLsp~~-N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~~~~~~~~~ 262 (402)
T 2hsa_B 184 GFDGIEIHGAHGYLIDQFLKDGI-NDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSLG 262 (402)
T ss_dssp TCSEEEEECCTTSHHHHHHCTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCSCHHHHH
T ss_pred CCCEEEECCccchHHHhccCCcc-CccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCHHHH
Confidence 99999999997 875 478999999999999999999999999985 5999999985 2 122334555
Q ss_pred HHHHHHHhhcCC------ccEEEEccCccccCCCCCCCCCCCC-c-ccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHH
Q 017176 155 CDFIYKVSSLSP------TRHFIIHSRKALLNGISPAENRTIP-P-LKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL 226 (376)
Q Consensus 155 ~~~i~~~~e~~G------vd~I~vh~r~~~~~g~~~~~~~~~~-~-~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l 226 (376)
.. +++.++++| +|+|+||+++.......+. .... + ..+++++++++.+ ++|||+|||| +++++++++
T Consensus 263 ~~-la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~vk~~~-~iPvi~~G~i-~~~~a~~~l 337 (402)
T 2hsa_B 263 LA-VVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEA--GRLGSEEEEARLMRTLRNAY-QGTFICSGGY-TRELGIEAV 337 (402)
T ss_dssp HH-HHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSS--TTTTHHHHHHHHHHHHHHHC-SSCEEEESSC-CHHHHHHHH
T ss_pred HH-HHHHHHhcCCccCCceEEEEEecCccccccCCcc--ccccCCcchHHHHHHHHHHC-CCCEEEeCCC-CHHHHHHHH
Confidence 54 456778899 9999999886321000000 0000 1 1356667777765 8999999999 999999999
Q ss_pred Hc-CcCeeEEchHHhhCCchhhH
Q 017176 227 RK-GAHHVMVGRAAYQNPWYTLG 248 (376)
Q Consensus 227 ~~-Gad~VmiGRa~l~~P~lf~~ 248 (376)
+. +||+||+||+++.||||+.+
T Consensus 338 ~~g~aD~V~igR~~l~dP~l~~k 360 (402)
T 2hsa_B 338 AQGDADLVSYGRLFISNPDLVMR 360 (402)
T ss_dssp HTTSCSEEEESHHHHHCTTHHHH
T ss_pred HCCCCceeeecHHHHhCchHHHH
Confidence 94 59999999999999999743
No 10
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=100.00 E-value=1e-35 Score=292.38 Aligned_cols=235 Identities=14% Similarity=0.061 Sum_probs=179.8
Q ss_pred CCCeecCCcEEEccCCCC-------ChHHHHHHHHHhCCCcEEEecceeecccccc---------cchh---hhhh-ccC
Q 017176 2 VARQYLPPWFSVAPMMDW-------TDNHYRTLARLISKHAWLYTEMLAAETIIYQ---------QGNL---DRFL-AFS 61 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~-------td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~---------~~~~---~~~~-~~~ 61 (376)
||+++|||||++|||++. |+....+|.+.+-|+|+++||+++++..... +..+ .++. .+|
T Consensus 22 ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~g~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~~avh 101 (376)
T 1icp_A 22 MGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGYKDVPGIWTKEQVEAWKPIVDAVH 101 (376)
T ss_dssp ETTEEESCSEEECCCCCCCCGGGSCCHHHHHHHHHTCCTTCEEECCCEECSGGGCCSTTCCBCSSHHHHHHHHHHHHHHH
T ss_pred ECCEEECCccEECCcCcCcCCCCCCCHHHHHHHHHhcCCeeEEEECceeeccccccCcccCccCCHHHHHHHHHHHHHHH
Confidence 688999999999999875 6777777765442399999999998743221 1222 1222 368
Q ss_pred CCCCCEEEEecCC--------------------------------------CH------------HHHHHHHHHHHHCCC
Q 017176 62 PEQHPIVLQIGGS--------------------------------------NL------------DNLAKATELANAYNY 91 (376)
Q Consensus 62 ~~~~p~~vQL~g~--------------------------------------~~------------~~~~~aa~~~~~~G~ 91 (376)
..+.++++||+|. .| ++|++||++++++||
T Consensus 102 ~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~AA~~a~~aGf 181 (376)
T 1icp_A 102 AKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAARNAIEAGF 181 (376)
T ss_dssp HTTCEEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTHHHHHHHHHHHHHHHHHTTC
T ss_pred hcCCeEEEEeecCCCCcCcccccCCCceecCCCCCCccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8899999999871 12 699999999999999
Q ss_pred CEEEecCCC---------CCccccCCCCccccccCCHHHHHHHHHHHhcccCc-cEEEEecCC-C----CCCccHHHHHH
Q 017176 92 DEINLNCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNV-PVSVKCRIG-V----DDHDSYNQLCD 156 (376)
Q Consensus 92 d~IeiN~gc---------P~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~-pv~vKiR~g-~----~~~~~~~~~~~ 156 (376)
|+||||++| |.. +.|+|+||++++||++++.||+++||++++. ||+||++.. + ++..+.++..+
T Consensus 182 DgVEih~a~GyLl~qFlsp~~-N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~~~~~~~~~ 260 (376)
T 1icp_A 182 DGVEIHGAHGYLIDQFMKDQV-NDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALGLY 260 (376)
T ss_dssp SEEEEEECTTSHHHHHHCTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCSCHHHHHHH
T ss_pred CEEEEcCccchhhhhccCCcc-cCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCCCCHHHHHH
Confidence 999999997 765 4789999999999999999999999999853 999999974 2 22233444444
Q ss_pred HHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcCeeEE
Q 017176 157 FIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 235 (376)
Q Consensus 157 ~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad~Vmi 235 (376)
+++.++++|+|+|++|+++....+. .. ..++.++++++.+ ++|||+||+| ++++++++++ .+||+||+
T Consensus 261 -la~~le~~Gvd~i~v~~~~~~~~~~-~~-------~~~~~~~~vr~~~-~iPvi~~G~i-~~~~a~~~l~~g~aD~V~~ 329 (376)
T 1icp_A 261 -MVESLNKYDLAYCHVVEPRMKTAWE-KI-------ECTESLVPMRKAY-KGTFIVAGGY-DREDGNRALIEDRADLVAY 329 (376)
T ss_dssp -HHHHHGGGCCSEEEEECCSCCC--------------CCCCSHHHHHHC-CSCEEEESSC-CHHHHHHHHHTTSCSEEEE
T ss_pred -HHHHHHHcCCCEEEEcCCcccCCCC-cc-------ccHHHHHHHHHHc-CCCEEEeCCC-CHHHHHHHHHCCCCcEEee
Confidence 4667789999999999886321111 00 0123345666655 8999999999 9999999999 45999999
Q ss_pred chHHhhCCchhhH
Q 017176 236 GRAAYQNPWYTLG 248 (376)
Q Consensus 236 GRa~l~~P~lf~~ 248 (376)
||+++.||||+.+
T Consensus 330 gR~~l~~P~l~~k 342 (376)
T 1icp_A 330 GRLFISNPDLPKR 342 (376)
T ss_dssp SHHHHHCTTHHHH
T ss_pred cHHHHhCccHHHH
Confidence 9999999999743
No 11
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=100.00 E-value=1.1e-35 Score=295.23 Aligned_cols=241 Identities=12% Similarity=0.097 Sum_probs=183.0
Q ss_pred C-CCeecCCcEEEccCCC--------CChHHHHHHHHHhCCCcEEEecceeecccccc---------cchhhh---hh-c
Q 017176 2 V-ARQYLPPWFSVAPMMD--------WTDNHYRTLARLISKHAWLYTEMLAAETIIYQ---------QGNLDR---FL-A 59 (376)
Q Consensus 2 i-~~~~l~nri~lAPM~~--------~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~---------~~~~~~---~~-~ 59 (376)
| |+++|||||++|||.. +|+....+|.++++|+|+++||.+.+...... +..+.. +. .
T Consensus 33 i~g~~~lkNRiv~aPm~~~~a~~dg~~t~~~~~yy~~rA~G~GLiIte~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~a 112 (419)
T 3l5a_A 33 LPNGIKISNRFVLSPMTVNASTKEGYITKADLAYAARRSNSAGMQVTGAAYIEPYGKLFEYGFNIDHDACIPGLTNMAST 112 (419)
T ss_dssp CTTSCEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTSCSEEEEEEEESSGGGCCSTTCEECSSGGGHHHHHHHHHH
T ss_pred eCCCCEECCCeEeCCCCCCccCCCCCCCHHHHHHHHHHhcCCcEEEecceEeCcccccCCCccccccHHHHHHHHHHHHH
Confidence 5 8899999999999964 57888898876666799999999888743221 122222 22 3
Q ss_pred cCCCCCCEEEEecCCC----------------------------------------HHHHHHHHHHHHHCCCCEEEecCC
Q 017176 60 FSPEQHPIVLQIGGSN----------------------------------------LDNLAKATELANAYNYDEINLNCG 99 (376)
Q Consensus 60 ~~~~~~p~~vQL~g~~----------------------------------------~~~~~~aa~~~~~~G~d~IeiN~g 99 (376)
+|..+.++++||++.. .++|++||++++++|||+||||++
T Consensus 113 vh~~G~~i~~QL~H~Gr~~~~~~~~~~~~vapS~i~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~a 192 (419)
T 3l5a_A 113 MKQHGSLAIIQLAHAGRFSNQAILNFGKVYGPSPMTLHSPIEHVVIAMSHEKINSIIQQYRDATLRAIKAGFDGVEISIA 192 (419)
T ss_dssp HHTTSCEEEEEEECCGGGCHHHHHHHSEEEESSCEEECSSSSEEEEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHhcCCEEEEEeccCCCcccccccCCCceeCCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCc
Confidence 6889999999998521 278999999999999999999999
Q ss_pred C---------CCccccCCCCccccc-cCCHHHHHHHHHHHhccc------CccEEEEecCCC--CC--CccHHHHHHHHH
Q 017176 100 C---------PSPKVAGHGCFGVSL-MLDPKFVGEAMSVIAANT------NVPVSVKCRIGV--DD--HDSYNQLCDFIY 159 (376)
Q Consensus 100 c---------P~~~v~r~g~yG~~l-~~~~~~~~eiv~~v~~~~------~~pv~vKiR~g~--~~--~~~~~~~~~~i~ 159 (376)
| |.. +.|+|+|||++ +||++++.||+++|++++ ++||+||++..- +. ..+.++..++ +
T Consensus 193 hGYLl~QFlSp~~-N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G~~~ed~~~l-a 270 (419)
T 3l5a_A 193 QRLLIQTFFSTFS-NRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQL-I 270 (419)
T ss_dssp TTSHHHHHHCTTT-CCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTEEEECHHHHHHH-H
T ss_pred cchHHHHccCCcc-cccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccccccCCCCCCCHHHHHHH-H
Confidence 8 875 58899999999 999999999999999987 679999998721 00 1234555554 4
Q ss_pred HHhhc-CCccEEEEccCccccCCC-CCCCCCCCCcccHHHHHHHHhhCC-CCeEEEecCCCCHHHHHHHHHcCcCeeEEc
Q 017176 160 KVSSL-SPTRHFIIHSRKALLNGI-SPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVG 236 (376)
Q Consensus 160 ~~~e~-~Gvd~I~vh~r~~~~~g~-~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi~nGgI~s~~da~~~l~~Gad~VmiG 236 (376)
+.+++ +|+|+|+||+++...... ..... +...++.+..+++.+. ++|||+||||+|+++++++++. ||+|++|
T Consensus 271 ~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g---~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiG 346 (419)
T 3l5a_A 271 DWVMDVSNIQYLAIASWGRHIYQNTSRTPG---DHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQH-ADMVGMS 346 (419)
T ss_dssp HHHHHHSCCCCEEECCTTCCGGGCBCCCSS---TTTTSBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG-CSEEEES
T ss_pred HHHHhhcCCcEEEEeeCCccccccccCCCC---ccccHHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh-CCcHHHH
Confidence 55677 999999999986411000 00000 0012344555555543 6999999999999999999999 9999999
Q ss_pred hHHhhCCchhhH
Q 017176 237 RAAYQNPWYTLG 248 (376)
Q Consensus 237 Ra~l~~P~lf~~ 248 (376)
|+++.||+|+.+
T Consensus 347 R~~IanPdlv~k 358 (419)
T 3l5a_A 347 SPFVTEPDFVHK 358 (419)
T ss_dssp THHHHCTTHHHH
T ss_pred HHHHHCcHHHHH
Confidence 999999999743
No 12
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=100.00 E-value=4.6e-35 Score=285.41 Aligned_cols=239 Identities=18% Similarity=0.203 Sum_probs=185.1
Q ss_pred CCCeecCCcEEEccCCC--------CChHHHHHHH-HHhCCCcEEEecceeecccccc---------cchhhh---hh-c
Q 017176 2 VARQYLPPWFSVAPMMD--------WTDNHYRTLA-RLISKHAWLYTEMLAAETIIYQ---------QGNLDR---FL-A 59 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~--------~td~~~r~~~-~~~Gg~gl~~te~v~~~~~~~~---------~~~~~~---~~-~ 59 (376)
||+++|||||++|||+. .|+....+|. |+.||+|+++||.+.+...... +..+.. +. .
T Consensus 10 ig~~~l~NRiv~apm~~~~~~~~g~~~~~~~~~y~~rA~gg~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~~ 89 (349)
T 3hgj_A 10 LGGLRLKNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPLGRISPYDLGIWSEDHLPGLKELARR 89 (349)
T ss_dssp ETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSGGGHHHHHHHHHH
T ss_pred ECCEEecCceEECCcCcCCcCCCCCCCHHHHHHHHHHhcCCceEEEecceeecccccCCCCcCccCcHHHHHHHHHHHHH
Confidence 68999999999999974 4678888886 6779999999999888753221 122222 22 2
Q ss_pred cCCCCCCEEEEecCC----------------C-----------------------------HHHHHHHHHHHHHCCCCEE
Q 017176 60 FSPEQHPIVLQIGGS----------------N-----------------------------LDNLAKATELANAYNYDEI 94 (376)
Q Consensus 60 ~~~~~~p~~vQL~g~----------------~-----------------------------~~~~~~aa~~~~~~G~d~I 94 (376)
+|..+.++++||++. . .++|++||++++++|||+|
T Consensus 90 vh~~G~~i~~Ql~H~Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgV 169 (349)
T 3hgj_A 90 IREAGAVPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFVEGARRALRAGFQVI 169 (349)
T ss_dssp HHHTTCEEEEEEECCGGGCCBCCGGGTCCBCCCCCEESSSCCSSTTCCCCEECCHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred HHhCCCeEEEEeccCCccccccccccccccCCCcccCCCcccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 678899999999741 0 3789999999999999999
Q ss_pred EecCCC---------CCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCC--CCCccHHHHHHHHHHH
Q 017176 95 NLNCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGV--DDHDSYNQLCDFIYKV 161 (376)
Q Consensus 95 eiN~gc---------P~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~--~~~~~~~~~~~~i~~~ 161 (376)
|||++| |.. +.|+|+||++++||++++.||+++||+.+ ++||.||++..- +...+.++... +++.
T Consensus 170 Eih~a~GyLl~qFlsp~~-N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~-la~~ 247 (349)
T 3hgj_A 170 ELHMAHGYLLSSFLSPLS-NQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLA-FARR 247 (349)
T ss_dssp EEEECTTSHHHHHHCTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHH-HHHH
T ss_pred EECCccchHHHHhcCCcc-cccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHH-HHHH
Confidence 999999 886 47899999999999999999999999998 689999999731 11123455554 3556
Q ss_pred hhcCCccEEEEcc-CccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcC-cCeeEEchHH
Q 017176 162 SSLSPTRHFIIHS-RKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHHVMVGRAA 239 (376)
Q Consensus 162 ~e~~Gvd~I~vh~-r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~G-ad~VmiGRa~ 239 (376)
+++.|+|+|++|. +....... + .-+...++.+.++++.+ ++|||++|+|.|+++++++++.| ||+|++||++
T Consensus 248 L~~~Gvd~i~vs~g~~~~~~~~-~----~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~ 321 (349)
T 3hgj_A 248 LKELGVDLLDCSSGGVVLRVRI-P----LAPGFQVPFADAVRKRV-GLRTGAVGLITTPEQAETLLQAGSADLVLLGRVL 321 (349)
T ss_dssp HHHTTCCEEEEECCCSCSSSCC-C----CCTTTTHHHHHHHHHHH-CCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHH
T ss_pred HHHcCCCEEEEecCCcCccccc-C----CCccccHHHHHHHHHHc-CceEEEECCCCCHHHHHHHHHCCCceEEEecHHH
Confidence 7789999999995 33211000 0 01123467777777765 89999999999999999999966 9999999999
Q ss_pred hhCCchhhH
Q 017176 240 YQNPWYTLG 248 (376)
Q Consensus 240 l~~P~lf~~ 248 (376)
+.||+|+.+
T Consensus 322 lanPdl~~k 330 (349)
T 3hgj_A 322 LRDPYFPLR 330 (349)
T ss_dssp HHCTTHHHH
T ss_pred HhCchHHHH
Confidence 999999643
No 13
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=100.00 E-value=1.4e-34 Score=283.27 Aligned_cols=240 Identities=17% Similarity=0.158 Sum_probs=185.2
Q ss_pred CCCeecCCcEEEccCCC-------CChHHHHHHH-HHhCCCcEEEecceeeccccccc---------chhh---hhh-cc
Q 017176 2 VARQYLPPWFSVAPMMD-------WTDNHYRTLA-RLISKHAWLYTEMLAAETIIYQQ---------GNLD---RFL-AF 60 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~-------~td~~~r~~~-~~~Gg~gl~~te~v~~~~~~~~~---------~~~~---~~~-~~ 60 (376)
||+++|||||++|||+. .|+....+|. |+.||+|+++||.+.+....... ..+. ++. .+
T Consensus 10 ig~~~l~NRiv~apm~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~~v 89 (363)
T 3l5l_A 10 LKDVTLRNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPEGRITPGCAGIWSDAHAQAFVPVVQAI 89 (363)
T ss_dssp ETTEEESSSEEECCCCCCCCBTTBCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTCCBCSSHHHHHHHHHHHHHH
T ss_pred ECCEEeeCceEECCCCCCcCCCCCCCHHHHHHHHHHHccCceEEEecceeeCccccCCCCcceecCHHHHHHHHHHHHHH
Confidence 68999999999999975 4788888886 77799999999998887532221 1122 222 26
Q ss_pred CCCCCCEEEEecCC------------------------------------C----------------HHHHHHHHHHHHH
Q 017176 61 SPEQHPIVLQIGGS------------------------------------N----------------LDNLAKATELANA 88 (376)
Q Consensus 61 ~~~~~p~~vQL~g~------------------------------------~----------------~~~~~~aa~~~~~ 88 (376)
|..+.++++||++. . .++|++||+++++
T Consensus 90 h~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~ 169 (363)
T 3l5l_A 90 KAAGSVPGIQIAHAGRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGAHLPKVPREMTLDDIARVKQDFVDAARRARD 169 (363)
T ss_dssp HHTTCEEEEEEECCGGGCSBCCGGGTSSBCCTTCTTCCCCEESSSCCCBTTBCCCCEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCEEEEEeccCCccccccccccccccccccccCCCcccCCCCCccCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHH
Confidence 78888999999741 0 3689999999999
Q ss_pred CCCCEEEecCC---------CCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCC-CCC-C-ccHHHH
Q 017176 89 YNYDEINLNCG---------CPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIG-VDD-H-DSYNQL 154 (376)
Q Consensus 89 ~G~d~IeiN~g---------cP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g-~~~-~-~~~~~~ 154 (376)
+|||+||||++ ||.. +.|+|+||++++||++++.||+++||+.+ ++||.||++.. +.+ . .+.++.
T Consensus 170 aGfDgVEih~a~GyLl~qFlsp~~-N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~ 248 (363)
T 3l5l_A 170 AGFEWIELHFAHGYLGQSFFSEHS-NKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEES 248 (363)
T ss_dssp HTCSEEEEEECTTSHHHHHHCTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHH
T ss_pred cCCCEEEEccccchHHHHccCCCc-CCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHH
Confidence 99999999998 6876 58899999999999999999999999998 57999999973 111 1 234555
Q ss_pred HHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcC-cCee
Q 017176 155 CDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHHV 233 (376)
Q Consensus 155 ~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~G-ad~V 233 (376)
.. +++.+++.|+|+|+||+++.......+ .-+...++.+.++++.+ ++|||++|+|.|+++++++++.| ||+|
T Consensus 249 ~~-la~~L~~~Gvd~i~vs~g~~~~~~~~~----~~~~~~~~~~~~ir~~~-~iPVi~~GgI~s~e~a~~~l~~G~aD~V 322 (363)
T 3l5l_A 249 IE-LARRFKAGGLDLLSVSVGFTIPDTNIP----WGPAFMGPIAERVRREA-KLPVTSAWGFGTPQLAEAALQANQLDLV 322 (363)
T ss_dssp HH-HHHHHHHTTCCEEEEEECCCSSCCCCC----CCTTTTHHHHHHHHHHH-TCCEEECSSTTSHHHHHHHHHTTSCSEE
T ss_pred HH-HHHHHHHcCCCEEEEecCccccccccC----CCcchhHHHHHHHHHHc-CCcEEEeCCCCCHHHHHHHHHCCCccEE
Confidence 54 456678899999999976421110000 00112366777777665 89999999999999999999966 9999
Q ss_pred EEchHHhhCCchhhH
Q 017176 234 MVGRAAYQNPWYTLG 248 (376)
Q Consensus 234 miGRa~l~~P~lf~~ 248 (376)
++||+++.||+|+.+
T Consensus 323 ~iGR~~lanPdl~~k 337 (363)
T 3l5l_A 323 SVGRAHLADPHWAYF 337 (363)
T ss_dssp ECCHHHHHCTTHHHH
T ss_pred EecHHHHhCchHHHH
Confidence 999999999999643
No 14
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=100.00 E-value=1.8e-34 Score=281.27 Aligned_cols=226 Identities=17% Similarity=0.141 Sum_probs=176.1
Q ss_pred CCCeecCCcEEEccCCC--------CChHHHHHHHHHhCCCcEEEecceeeccccccc---------chhhh---hh-cc
Q 017176 2 VARQYLPPWFSVAPMMD--------WTDNHYRTLARLISKHAWLYTEMLAAETIIYQQ---------GNLDR---FL-AF 60 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~--------~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~---------~~~~~---~~-~~ 60 (376)
||+++|||||++|||.. .|+....+|.+++. +|+++||.+.+....... ..+.. +. .+
T Consensus 18 ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~-~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~av 96 (361)
T 3gka_A 18 IGDLTLANRIIMAPLTRARAGDTRTPNALMARYYAERAS-AGLIISEATSVTPQGVGYASTPGIWSPEQVDGWRLVTDAV 96 (361)
T ss_dssp ETTEEESCSEEECCCCCCCSTTTTCCCHHHHHHHHTTTT-SSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHHHHHHH
T ss_pred ECCEEecCccEECCCCCCccCCCCCCCHHHHHHHHHHHh-CCEEEEcceeecccccCCCCCCccCCHHHHHHHHHHHHHH
Confidence 68999999999999975 46778888875555 799999998887533221 12222 22 26
Q ss_pred CCCCCCEEEEecCC------------------------------------C------------HHHHHHHHHHHHHCCCC
Q 017176 61 SPEQHPIVLQIGGS------------------------------------N------------LDNLAKATELANAYNYD 92 (376)
Q Consensus 61 ~~~~~p~~vQL~g~------------------------------------~------------~~~~~~aa~~~~~~G~d 92 (376)
|..+.++++||++. . .++|++||++++++|||
T Consensus 97 H~~G~~i~~QL~H~Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~g~~~~~~pr~mt~~eI~~ii~~f~~AA~~A~~aGfD 176 (361)
T 3gka_A 97 HAAGGRIFLQLWHVGRVSDPVFLDGALPVAPSAIAPGGHVSLVRPQRPYVTPRALELDEIPGVVAAFRRGAENARAAGFD 176 (361)
T ss_dssp HHTTCCEEEEEECCTTSCCGGGTTTCCCEESSSCCCSSBCSSCSSCCBCCCCEECCGGGHHHHHHHHHHHHHHHHHTTCS
T ss_pred HhcCCeEEEeeccCCccccccccCCCCcccCCCCCCCCcccccccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 78899999999641 0 36899999999999999
Q ss_pred EEEecCCC---------CCccccCCCCccccccCCHHHHHHHHHHHhcccCc-cEEEEecCC-----CCCCccHHHHHHH
Q 017176 93 EINLNCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNV-PVSVKCRIG-----VDDHDSYNQLCDF 157 (376)
Q Consensus 93 ~IeiN~gc---------P~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~-pv~vKiR~g-----~~~~~~~~~~~~~ 157 (376)
+||||++| |.. +.|+|+||++++||++++.||+++||+.++. ||+||++.. +.+....++...
T Consensus 177 gVEih~a~GYLl~QFLsp~~-N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~- 254 (361)
T 3gka_A 177 GVEVHGANGYLLDQFLQDSA-NRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSDPAATFGH- 254 (361)
T ss_dssp EEEEECCTTSHHHHHHSTTT-CCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSCHHHHHHH-
T ss_pred EEEECCcCccHHHhccCccc-ccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCCCCCcHHHHHH-
Confidence 99999998 875 4889999999999999999999999999853 999999973 111122444444
Q ss_pred HHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHc-CcCeeEEc
Q 017176 158 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GAHHVMVG 236 (376)
Q Consensus 158 i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~-Gad~VmiG 236 (376)
+++.++++|+|+|+||+++ .+ . +.+.++++.+ ++|||+||+| |+++++++++. +||+|++|
T Consensus 255 la~~l~~~Gvd~i~v~~~~---~~---~----------~~~~~ik~~~-~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iG 316 (361)
T 3gka_A 255 VARELGRRRIAFLFARESF---GG---D----------AIGQQLKAAF-GGPFIVNENF-TLDSAQAALDAGQADAVAWG 316 (361)
T ss_dssp HHHHHHHTTCSEEEEECCC---ST---T----------CCHHHHHHHH-CSCEEEESSC-CHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHcCCCEEEECCCC---CC---H----------HHHHHHHHHc-CCCEEEeCCC-CHHHHHHHHHcCCccEEEEC
Confidence 4667788999999999876 11 0 1234555544 7999999999 99999999995 59999999
Q ss_pred hHHhhCCchhhH
Q 017176 237 RAAYQNPWYTLG 248 (376)
Q Consensus 237 Ra~l~~P~lf~~ 248 (376)
|+++.||||+.+
T Consensus 317 R~~ladPdl~~k 328 (361)
T 3gka_A 317 KLFIANPDLPRR 328 (361)
T ss_dssp HHHHHCTTHHHH
T ss_pred HHhHhCcHHHHH
Confidence 999999999743
No 15
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=100.00 E-value=3.4e-34 Score=279.38 Aligned_cols=226 Identities=15% Similarity=0.110 Sum_probs=175.9
Q ss_pred CCCeecCCcEEEccCCC--------CChHHHHHHHHHhCCCcEEEecceeeccccccc---------chhhh---hh-cc
Q 017176 2 VARQYLPPWFSVAPMMD--------WTDNHYRTLARLISKHAWLYTEMLAAETIIYQQ---------GNLDR---FL-AF 60 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~--------~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~---------~~~~~---~~-~~ 60 (376)
||+++|||||++|||+. .|+....+|.+.+. +|+++||.+.+....... ..+.. +. .+
T Consensus 10 ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~-~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~av 88 (362)
T 4ab4_A 10 LGDLQLPNRIIMAPLTRCRADEGRVPNALMAEYYVQRAS-AGLILSEATSVSPMGVGYPDTPGIWNDEQVRGWNNVTKAV 88 (362)
T ss_dssp ETTEEESCSEEECCCCCCCCBTTTBCCHHHHHHHHHTTT-SSEEEEEEEESSGGGCCSTTCCBCSSHHHHHHHHHHHHHH
T ss_pred ECCEEeeCccEECCccCCccCCCCCCCHHHHHHHHHHHh-hCEEeeeeeEecccccCCCCCCCcCCHHHHHHHHHHHHHH
Confidence 68899999999999975 46778888876655 799999998887433221 12222 22 26
Q ss_pred CCCCCCEEEEecCCC------------------------------------------------HHHHHHHHHHHHHCCCC
Q 017176 61 SPEQHPIVLQIGGSN------------------------------------------------LDNLAKATELANAYNYD 92 (376)
Q Consensus 61 ~~~~~p~~vQL~g~~------------------------------------------------~~~~~~aa~~~~~~G~d 92 (376)
|..+.++++||++.. .++|++||++++++|||
T Consensus 89 H~~G~~i~~QL~H~Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~f~~AA~~a~~aGfD 168 (362)
T 4ab4_A 89 HAAGGRIFLQLWHVGRISHPSYLNGELPVAPSAIQPKGHVSLVRPLSDYPTPRALETEEINDIVEAYRSGAENAKAAGFD 168 (362)
T ss_dssp HHTTCCEEEEEECCTTSCCGGGTTTCCCEESSCCCCSSBCSSCSSCCBCCCCEECCHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HhcCCEEEEEeccCcccccccccCCCcccCCCCCCCCccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 788899999996410 36899999999999999
Q ss_pred EEEecCCC---------CCccccCCCCccccccCCHHHHHHHHHHHhcccC-ccEEEEecCCC--C---CCccHHHHHHH
Q 017176 93 EINLNCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIGV--D---DHDSYNQLCDF 157 (376)
Q Consensus 93 ~IeiN~gc---------P~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~-~pv~vKiR~g~--~---~~~~~~~~~~~ 157 (376)
+||||++| |.. +.|+|+||++++||++++.||+++||+.++ .||+||++..- + +....++...
T Consensus 169 gVEih~a~GYLl~QFLSp~~-N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~- 246 (362)
T 4ab4_A 169 GVEIHGANGYLLDQFLQSST-NQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDADRAETFTY- 246 (362)
T ss_dssp EEEEECCTTSHHHHHHSTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTTHHHHHHH-
T ss_pred EEEECCcCccHHHhhcCCcc-ccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccCCCCcHHHHHH-
Confidence 99999998 875 478999999999999999999999999985 39999999741 1 1122344444
Q ss_pred HHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHc-CcCeeEEc
Q 017176 158 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GAHHVMVG 236 (376)
Q Consensus 158 i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~-Gad~VmiG 236 (376)
+++.++++|+|+|+||+++ .| . + .+.++++.+ ++|||+||+| |+++++++++. +||+|++|
T Consensus 247 la~~l~~~Gvd~i~v~~~~---~~---~------~----~~~~ik~~~-~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iG 308 (362)
T 4ab4_A 247 VARELGKRGIAFICSRERE---AD---D------S----IGPLIKEAF-GGPYIVNERF-DKASANAALASGKADAVAFG 308 (362)
T ss_dssp HHHHHHHTTCSEEEEECCC---CT---T------C----CHHHHHHHH-CSCEEEESSC-CHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHhCCCEEEECCCC---CC---H------H----HHHHHHHHC-CCCEEEeCCC-CHHHHHHHHHcCCccEEEEC
Confidence 4667788999999999876 11 1 1 234555544 8999999999 99999999995 59999999
Q ss_pred hHHhhCCchhhH
Q 017176 237 RAAYQNPWYTLG 248 (376)
Q Consensus 237 Ra~l~~P~lf~~ 248 (376)
|+++.||||+.+
T Consensus 309 R~~lanPdl~~k 320 (362)
T 4ab4_A 309 VPFIANPDLPAR 320 (362)
T ss_dssp HHHHHCTTHHHH
T ss_pred HHhHhCcHHHHH
Confidence 999999999743
No 16
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=100.00 E-value=4.6e-33 Score=295.78 Aligned_cols=239 Identities=10% Similarity=0.033 Sum_probs=179.3
Q ss_pred CCCeecCCcEEEccCCCC-Ch----HHHHHHH-HHhCCCcEEEecceeecccccc----------cchh---hhhh-ccC
Q 017176 2 VARQYLPPWFSVAPMMDW-TD----NHYRTLA-RLISKHAWLYTEMLAAETIIYQ----------QGNL---DRFL-AFS 61 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~-td----~~~r~~~-~~~Gg~gl~~te~v~~~~~~~~----------~~~~---~~~~-~~~ 61 (376)
||+++|||||++|||++. ++ ...++|. ++.||+|+++||+++++..... +... .++. .+|
T Consensus 15 ig~~~l~NRiv~apm~~~~~~~~~~~~~~~y~~ra~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh 94 (729)
T 1o94_A 15 IGPKTLRNRFYQVPHCIGAGSDKPGFQSAHRSVKAEGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMTDEVH 94 (729)
T ss_dssp ETTEEESSSEEECCCCCSCTTTCHHHHHHHHHHHHHTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHHHHHH
T ss_pred ECCEEECCccEECCCcCCcCCCCcHHHHHHHHHHhcCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHHHHHHH
Confidence 689999999999999874 22 3344554 5668899999999998632211 1111 1222 368
Q ss_pred CCCCCEEEEecCC------------------------C---------------HHHHHHHHHHHHHCCCCEEEecCCC--
Q 017176 62 PEQHPIVLQIGGS------------------------N---------------LDNLAKATELANAYNYDEINLNCGC-- 100 (376)
Q Consensus 62 ~~~~p~~vQL~g~------------------------~---------------~~~~~~aa~~~~~~G~d~IeiN~gc-- 100 (376)
..+.++++||+|. . +++|++||++++++|||+||||++|
T Consensus 95 ~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gy 174 (729)
T 1o94_A 95 KYGALAGVELWYGGAHAPNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSY 174 (729)
T ss_dssp TTTCEEEEEEECCGGGSCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTC
T ss_pred hCCCeEEEEecCCCccccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccch
Confidence 8899999999982 0 3799999999999999999999999
Q ss_pred -------CCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecC-------CCCCCccHHHHHHHHHHHhhc
Q 017176 101 -------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRI-------GVDDHDSYNQLCDFIYKVSSL 164 (376)
Q Consensus 101 -------P~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~-------g~~~~~~~~~~~~~i~~~~e~ 164 (376)
|.. +.|+|+||++++||++++.||+++||+++ ++||++|++. ||+. .++..+ +++++++
T Consensus 175 Ll~qFlsp~~-N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~---~~~~~~-~~~~l~~ 249 (729)
T 1o94_A 175 LPLQFLNPYY-NKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEA---EVDGQK-FVEMADS 249 (729)
T ss_dssp HHHHHHCTTT-CCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCT---TTHHHH-HHHHHGG
T ss_pred HHHHhcCCcc-CCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCc---hHHHHH-HHHHHHh
Confidence 775 47899999999999999999999999998 7899999986 3431 123333 3456666
Q ss_pred CCccEEEEccCccc-cCCCCCCCCCCCCcc-cHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHc-CcCeeEEchHHhh
Q 017176 165 SPTRHFIIHSRKAL-LNGISPAENRTIPPL-KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GAHHVMVGRAAYQ 241 (376)
Q Consensus 165 ~Gvd~I~vh~r~~~-~~g~~~~~~~~~~~~-~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~-Gad~VmiGRa~l~ 241 (376)
|+|+|+||.+... +.+.... ....++. .+++++++++. .++|||++|+|.|+++++++++. +||+||+||+++.
T Consensus 250 -~~d~~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~-~~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~ 326 (729)
T 1o94_A 250 -LVDMWDITIGDIAEWGEDAGP-SRFYQQGHTIPWVKLVKQV-SKKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIA 326 (729)
T ss_dssp -GCSEEEEEECCSTTGGGTSCC-TTTCCTTTTHHHHHHHHTT-CSSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHH
T ss_pred -hcCEEEEeeecccccccccCC-ccccCccccHHHHHHHHHH-CCCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhc
Confidence 7999999987521 0110000 0111222 35666777665 49999999999999999999994 5999999999999
Q ss_pred CCchhhH
Q 017176 242 NPWYTLG 248 (376)
Q Consensus 242 ~P~lf~~ 248 (376)
||||+.+
T Consensus 327 ~P~~~~~ 333 (729)
T 1o94_A 327 DPFLPQK 333 (729)
T ss_dssp CTTHHHH
T ss_pred CchHHHH
Confidence 9999743
No 17
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=100.00 E-value=6.7e-33 Score=292.03 Aligned_cols=242 Identities=14% Similarity=0.088 Sum_probs=181.8
Q ss_pred CCCeecCCcEEEccCCC-CCh------HHHHHHH-HHhCCCcEEEecceeecccc--cc-------cchhhhh---h-cc
Q 017176 2 VARQYLPPWFSVAPMMD-WTD------NHYRTLA-RLISKHAWLYTEMLAAETII--YQ-------QGNLDRF---L-AF 60 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~-~td------~~~r~~~-~~~Gg~gl~~te~v~~~~~~--~~-------~~~~~~~---~-~~ 60 (376)
||+++||||++||||++ .++ ...++|. ++.||+|+++||+++++... .. +..+..+ . .+
T Consensus 11 ig~~~l~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 90 (671)
T 1ps9_A 11 LGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAV 90 (671)
T ss_dssp CSSCEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHHHHH
T ss_pred ECCEEEcCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHHHHH
Confidence 68999999999999987 332 2345554 56688999999999876322 11 1222222 2 36
Q ss_pred CCCCCCEEEEecCC----------------------CH------------HHHHHHHHHHHHCCCCEEEecCCC------
Q 017176 61 SPEQHPIVLQIGGS----------------------NL------------DNLAKATELANAYNYDEINLNCGC------ 100 (376)
Q Consensus 61 ~~~~~p~~vQL~g~----------------------~~------------~~~~~aa~~~~~~G~d~IeiN~gc------ 100 (376)
|..+.++++||+|. .| ++|+++|++++++|||+||||++|
T Consensus 91 h~~g~~i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~q 170 (671)
T 1ps9_A 91 HQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINE 170 (671)
T ss_dssp HHTTCCEEEEECCCGGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHH
T ss_pred HhcCCEEEEEeccCCcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHH
Confidence 88899999999984 22 799999999999999999999997
Q ss_pred ---CCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCC--CCCccHHHHHHHHHHHhhcCCccEEEEc
Q 017176 101 ---PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGV--DDHDSYNQLCDFIYKVSSLSPTRHFIIH 173 (376)
Q Consensus 101 ---P~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~--~~~~~~~~~~~~i~~~~e~~Gvd~I~vh 173 (376)
|.. +.|+|+||++++||++++.|++++||+.+ ++|+++|++..- ....+.++..++ ++.++++|+|+|++|
T Consensus 171 Flsp~~-n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~~-a~~l~~~g~d~i~v~ 248 (671)
T 1ps9_A 171 FLTLRT-NQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVEL-AQAIEAAGATIINTG 248 (671)
T ss_dssp HHCTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHH-HHHHHHHTCSEEEEE
T ss_pred hCCCcc-CCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHHH-HHHHHhcCCCEEEcC
Confidence 664 47899999999999999999999999998 789999999721 111234555543 556778999999999
Q ss_pred cCccccCCCCCCCCCCCCcc-cHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcC-cCeeEEchHHhhCCchhhH
Q 017176 174 SRKALLNGISPAENRTIPPL-KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHHVMVGRAAYQNPWYTLG 248 (376)
Q Consensus 174 ~r~~~~~g~~~~~~~~~~~~-~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~G-ad~VmiGRa~l~~P~lf~~ 248 (376)
+++..... +......++. .++.++++++. .++|||++|+|.|+++++++++.| ||+|++||+++.||||+.+
T Consensus 249 ~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~-~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k 322 (671)
T 1ps9_A 249 IGWHEARI--PTIATPVPRGAFSWVTRKLKGH-VSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSK 322 (671)
T ss_dssp ECBTTCSS--CSSSTTSCTTTTHHHHHHHTTS-CSSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHHCTTHHHH
T ss_pred CCcccccc--ccccccCCcchHHHHHHHHHHh-cCceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhCcHHHHH
Confidence 87532110 0000111222 24666666655 499999999999999999999955 9999999999999999743
No 18
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=100.00 E-value=6.3e-33 Score=293.11 Aligned_cols=241 Identities=10% Similarity=0.025 Sum_probs=175.0
Q ss_pred CCCeecCCcEEEccCCCCCh----HHHHHH--HHHhCCCcEEEecceeeccccccc----------chhhh---hh-ccC
Q 017176 2 VARQYLPPWFSVAPMMDWTD----NHYRTL--ARLISKHAWLYTEMLAAETIIYQQ----------GNLDR---FL-AFS 61 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td----~~~r~~--~~~~Gg~gl~~te~v~~~~~~~~~----------~~~~~---~~-~~~ 61 (376)
||+++|||||++|||+..+. ....++ .++.||+|+++||+++++...... ..+.. +. .+|
T Consensus 20 ig~~~l~NRiv~apm~~~~~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh 99 (690)
T 3k30_A 20 IGPFTTKNRFYQVPHCNGMGYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIADAIH 99 (690)
T ss_dssp ETTEECSSSEEECCCCCSCSSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHHHHHH
T ss_pred ECCEEECCCeEeCCCcCCCCCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHHHHHHH
Confidence 68999999999999986432 223322 367789999999999987543221 11222 22 367
Q ss_pred CCCCCEEEEecCCC-----------------------------------------HHHHHHHHHHHHHCCCCEEEecCCC
Q 017176 62 PEQHPIVLQIGGSN-----------------------------------------LDNLAKATELANAYNYDEINLNCGC 100 (376)
Q Consensus 62 ~~~~p~~vQL~g~~-----------------------------------------~~~~~~aa~~~~~~G~d~IeiN~gc 100 (376)
..+.++++||++.. .++|++||++++++|||+||||++|
T Consensus 100 ~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~ 179 (690)
T 3k30_A 100 EGGGLAGIELAHNGMNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAH 179 (690)
T ss_dssp HTTCEEEEEEECCGGGCCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECT
T ss_pred hcCCEEEEEccCCcccccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccc
Confidence 88999999999510 3899999999999999999999987
Q ss_pred CC---------ccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCC--CCCccHHHHHHHHHHHhhcCCc
Q 017176 101 PS---------PKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGV--DDHDSYNQLCDFIYKVSSLSPT 167 (376)
Q Consensus 101 P~---------~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~--~~~~~~~~~~~~i~~~~e~~Gv 167 (376)
++ ..+.|+|+||++++||++++.||+++|++.+ ++||.+|++..- +...+.++..++ ++.+++ |+
T Consensus 180 gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~g~~~~~~~~~-~~~l~~-~~ 257 (690)
T 3k30_A 180 GYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDGGITREDIEGV-LRELGE-LP 257 (690)
T ss_dssp TCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCSTTSCCHHHHHHH-HHHHTT-SS
T ss_pred cchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccccCCCCCCHHHHHHH-HHHHHh-hc
Confidence 76 1257899999999999999999999999998 456777765421 011234555543 556666 89
Q ss_pred cEEEEccCccccCCCCCCCCCCCCc-ccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcCeeEEchHHhhCCch
Q 017176 168 RHFIIHSRKALLNGISPAENRTIPP-LKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 168 d~I~vh~r~~~~~g~~~~~~~~~~~-~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad~VmiGRa~l~~P~l 245 (376)
|+|+||+++..... .+. ...++ ..++.++++++. .++|||+||+|+++++++++++ .+||+|++||++++||||
T Consensus 258 d~~~v~~~~~~~~~-~~~--~~~~~~~~~~~~~~i~~~-~~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P~~ 333 (690)
T 3k30_A 258 DLWDFAMGSWEGDS-VTS--RFAPEGRQEEFVAGLKKL-TTKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFL 333 (690)
T ss_dssp SEEEEECSCHHHHT-CCT--TTCCTTTTHHHHTTSGGG-CSSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCTTH
T ss_pred CEEEEecccccccC-CCC--ccCCccccHHHHHHHHHH-cCCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhCccH
Confidence 99999987521000 000 01111 124555555554 5999999999999999999999 459999999999999999
Q ss_pred hhH
Q 017176 246 TLG 248 (376)
Q Consensus 246 f~~ 248 (376)
+.+
T Consensus 334 ~~~ 336 (690)
T 3k30_A 334 PNK 336 (690)
T ss_dssp HHH
T ss_pred HHH
Confidence 743
No 19
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=99.98 E-value=8.8e-33 Score=271.97 Aligned_cols=236 Identities=12% Similarity=0.025 Sum_probs=172.7
Q ss_pred CCCeecCCcEEEccCCC--------CChHHHHHHH-HHhCCCcEEEecceeecccccccc----------hhhh---hh-
Q 017176 2 VARQYLPPWFSVAPMMD--------WTDNHYRTLA-RLISKHAWLYTEMLAAETIIYQQG----------NLDR---FL- 58 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~--------~td~~~r~~~-~~~Gg~gl~~te~v~~~~~~~~~~----------~~~~---~~- 58 (376)
||+++|||||++|||.. .|+....+|. |+.||+|+++||.+.+........ .+.. +.
T Consensus 20 ig~~~LkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~gG~GLIIte~~~V~~~g~~~~~~~~gi~~d~~i~~~k~l~~ 99 (407)
T 3tjl_A 20 VGNNTLQTKIVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQASGYEGAAPGIWTDKHAKAWKVITD 99 (407)
T ss_dssp ETTEEESCSEEBCCCCCCBSCTTSCCBHHHHHHHHHTCCSTTCEEEEEEEESSGGGCCCSSBCCBCSSHHHHHHHHHHHH
T ss_pred ECCEEecCCcEECCCCCCccCCCCCCCHHHHHHHHHHHcCCceEEEEcceEECCccCCCCCcCcccCCHHHHHHHHHHHH
Confidence 68899999999999974 3677888886 556889999999988764332211 1111 22
Q ss_pred ccCCCCCCEEEEecCCC-------------------------------------------------HHH-HHHHHHHHHH
Q 017176 59 AFSPEQHPIVLQIGGSN-------------------------------------------------LDN-LAKATELANA 88 (376)
Q Consensus 59 ~~~~~~~p~~vQL~g~~-------------------------------------------------~~~-~~~aa~~~~~ 88 (376)
.+|..+.++++||++.. .++ |++||+++++
T Consensus 100 avH~~G~~i~~QL~H~Gr~~~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~pr~lt~~eI~~ii~~~~~~aa~~a~~ 179 (407)
T 3tjl_A 100 KVHANGSFVSTQLIFLGRVADPAVMKTRGLNPVSASATYESDAAKEAAEAVGNPVRALTTQEVKDLVYEAYTNAAQKAMD 179 (407)
T ss_dssp HHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESSSCCSSHHHHHHHHHTTCCCEECCHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHhcCCEEEEEeccCCCccchhhcccCCCcccCCCCcccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 36888999999997520 146 9999999999
Q ss_pred CCCCEEEecCCC---------CCccccCCCCccccccCCHHHHHHHHHHHhcccC-ccEEEEecCCCCC------C-c--
Q 017176 89 YNYDEINLNCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIGVDD------H-D-- 149 (376)
Q Consensus 89 ~G~d~IeiN~gc---------P~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~-~pv~vKiR~g~~~------~-~-- 149 (376)
+|||+||||++| |.. +.|+|+||++++||++++.||+++|++.++ .||++|++. |+. . +
T Consensus 180 aGfdgveih~~~GYLl~QFLsp~~-N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~-~~~~~g~~~~~d~~ 257 (407)
T 3tjl_A 180 AGFDYIELHAAHGYLLDQFLQPCT-NQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISP-WATFQNMKAHKDTV 257 (407)
T ss_dssp TTCSEEEEECCTTSHHHHHHSTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECT-TCCGGGCCGGGSSS
T ss_pred hCCCeEEECCccchHHHHhcCccc-cccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECc-ccccCCCccccccc
Confidence 999999999999 875 478999999999999999999999999985 489999987 332 1 1
Q ss_pred -cHHHHHHHHHHHh---hcCC--ccEEEEc-cCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHH
Q 017176 150 -SYNQLCDFIYKVS---SLSP--TRHFIIH-SRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 222 (376)
Q Consensus 150 -~~~~~~~~i~~~~---e~~G--vd~I~vh-~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da 222 (376)
..++... +++.+ ++.| +|+|+|| +|+... ...+..+ .+..+..+++.+ ++|||+||||.+.+++
T Consensus 258 ~~~~~~~~-l~~~L~~~~~~G~~l~ylhv~~~~~~~~-~~~~~~~------~~~~~~~ir~~~-~~PvI~~Ggi~~~~dA 328 (407)
T 3tjl_A 258 HPLTTFSY-LVHELQQRADKGQGIAYISVVEPRVSGN-VDVSEED------QAGDNEFVSKIW-KGVILKAGNYSYDAPE 328 (407)
T ss_dssp CHHHHHHH-HHHHHHHHHHTTCCCSEEEEECTTEETT-EECCGGG------CCCCSHHHHHHC-CSEEEEESCGGGGTTT
T ss_pred ccHHHHHH-HHHHHHhHhhcCCceeEEEEEccccCCC-CcCCccc------hhHHHHHHHHHh-CCCEEecCCCCCHHHH
Confidence 1333333 34455 6688 9999999 553211 0000000 011223344444 7899999999999877
Q ss_pred HHHHH----cCcCeeEEchHHhhCCchhhH
Q 017176 223 NAALR----KGAHHVMVGRAAYQNPWYTLG 248 (376)
Q Consensus 223 ~~~l~----~Gad~VmiGRa~l~~P~lf~~ 248 (376)
.++++ .+||+|++||+++.||||+.+
T Consensus 329 ~~~i~~~~~g~aDlVa~GR~~iaNPdL~~r 358 (407)
T 3tjl_A 329 FKTLKEDIADKRTLVGFSRYFTSNPNLVWK 358 (407)
T ss_dssp THHHHHHHTTSSEEEECSHHHHHCTTHHHH
T ss_pred HHHHHhhccCCCeEEEeChhhhhCchHHHH
Confidence 77665 469999999999999999744
No 20
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=99.98 E-value=2.7e-31 Score=260.85 Aligned_cols=230 Identities=11% Similarity=0.049 Sum_probs=174.4
Q ss_pred CCCeecCCcEEEccCCC---------CC-hHHHHHHHHHhCCCcEEEecceeecccccc---------cchhhh---hh-
Q 017176 2 VARQYLPPWFSVAPMMD---------WT-DNHYRTLARLISKHAWLYTEMLAAETIIYQ---------QGNLDR---FL- 58 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~---------~t-d~~~r~~~~~~Gg~gl~~te~v~~~~~~~~---------~~~~~~---~~- 58 (376)
||+++|||||++|||.. .| +....+|.+.+| +||++||.+.+...... +..+.. +.
T Consensus 13 ig~~~l~NRiv~apm~~~~a~~~~g~pt~~~~~~yY~~rA~-~GLIite~~~v~~~g~~~~~~~gi~~d~~i~~~k~~~~ 91 (379)
T 3aty_A 13 LGRYTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRAS-AGLIIAEATMVQPNYTGFLTEPGIYSDAQIEEWRKIVD 91 (379)
T ss_dssp ETTEEESCSEEECCCCCCCBCTTTCCBCHHHHHHHHHTTTT-SSEEEEEEEESSTTCCSSSSCCBSSSHHHHHHHHHHHH
T ss_pred ECCEEEcCccEECCcCCCcccCCCCccCHHHHHHHHHHHhC-CCeEEECceecccccccCCCCCCcCCHHHHHHHHHHHH
Confidence 68999999999999974 25 677788876665 89999999887643221 111221 21
Q ss_pred ccCCCCCCEEEEecC----------------------------------------------------------------C
Q 017176 59 AFSPEQHPIVLQIGG----------------------------------------------------------------S 74 (376)
Q Consensus 59 ~~~~~~~p~~vQL~g----------------------------------------------------------------~ 74 (376)
.+|..+.++++||++ .
T Consensus 92 avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~g~~~~~~~~~apS~i~~~~~~~~~~~~~~g~~~~~~~pr~lt~~eI~~~ 171 (379)
T 3aty_A 92 AVHKKGGLIFLQLIHAGRAGIPEKILQQSKSDQDPLAGRLLAASAIPIKDHRIPAYFAASGEKETYGVPEELTDDEVRDG 171 (379)
T ss_dssp HHHHTTCCEEEEEECCGGGSCHHHHTTSCCCSSSTTTTCCEESSSCCCCSCCBCTTTSTTSSCBCCCCCEECCHHHHHHT
T ss_pred HHHhcCCEEEEEeccCCcccCcccccccccCCCCCccCcccCCCCCccccccccccccccccccCCCCCccCCHHHHhHH
Confidence 256777788888742 0
Q ss_pred CHHHHHHHHHHHH-HCCCCEEEecCCC---------CCccccC-CCCccc-cccCCHHHHHHHHHHHhcccC-ccEEEEe
Q 017176 75 NLDNLAKATELAN-AYNYDEINLNCGC---------PSPKVAG-HGCFGV-SLMLDPKFVGEAMSVIAANTN-VPVSVKC 141 (376)
Q Consensus 75 ~~~~~~~aa~~~~-~~G~d~IeiN~gc---------P~~~v~r-~g~yG~-~l~~~~~~~~eiv~~v~~~~~-~pv~vKi 141 (376)
.+++|++||++++ ++|||+||||++| |.. +.| +|+||+ +++||++++.||+++||++++ .||.||+
T Consensus 172 ~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~-N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRi 250 (379)
T 3aty_A 172 IIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESS-NKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRI 250 (379)
T ss_dssp HHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTT-CCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCC-CccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 1357789999999 9999999999997 765 477 899999 999999999999999999885 4899999
Q ss_pred cCC-C----CCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCC
Q 017176 142 RIG-V----DDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGI 216 (376)
Q Consensus 142 R~g-~----~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI 216 (376)
+.. + .+..+.++..+ +++.+++.|+|+|++|+++.. . . ..+ .+ +.++++.+ ++|||++|+|
T Consensus 251 s~~~~~~~~~~~~~~~~~~~-la~~l~~~Gvd~i~v~~~~~~--~---~---~~~---~~-~~~ir~~~-~iPvi~~G~i 316 (379)
T 3aty_A 251 SPLNGVHGMIDSNPEALTKH-LCKKIEPLSLAYLHYLRGDMV--N---Q---QIG---DV-VAWVRGSY-SGVKISNLRY 316 (379)
T ss_dssp CTTCCGGGCCCSCHHHHHHH-HHHHHGGGCCSEEEEECSCTT--S---C---CCC---CH-HHHHHTTC-CSCEEEESSC
T ss_pred CcccccccCCCCCCHHHHHH-HHHHHHHhCCCEEEEcCCCcC--C---C---Ccc---HH-HHHHHHHC-CCcEEEECCC
Confidence 983 2 12234555554 456678899999999987521 1 0 111 24 56666654 8999999999
Q ss_pred CCHHHHHHHHHc-CcCeeEEchHHhhCCchhhH
Q 017176 217 NTVDEVNAALRK-GAHHVMVGRAAYQNPWYTLG 248 (376)
Q Consensus 217 ~s~~da~~~l~~-Gad~VmiGRa~l~~P~lf~~ 248 (376)
|+++++++++. +||+||+||+++.||||+.+
T Consensus 317 -t~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k 348 (379)
T 3aty_A 317 -DFEEADQQIREGKVDAVAFGAKFIANPDLVER 348 (379)
T ss_dssp -CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHH
T ss_pred -CHHHHHHHHHcCCCeEEEecHHHHhCcHHHHH
Confidence 99999999995 49999999999999999743
No 21
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.97 E-value=3.4e-31 Score=254.30 Aligned_cols=231 Identities=16% Similarity=0.123 Sum_probs=175.5
Q ss_pred CCCeecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecccccccc-------------------hhhhh---hc
Q 017176 2 VARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQG-------------------NLDRF---LA 59 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~-------------------~~~~~---~~ 59 (376)
+++++++||+++||...-.+.+++..+...| +|+++|++++.++...+.. ..+.+ +.
T Consensus 6 i~g~~l~npv~~Aag~~~~~~~~~~~~~~~G-~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~ 84 (311)
T 1jub_A 6 FANAKFANPFMNASGVHCMTIEDLEELKASQ-AGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVL 84 (311)
T ss_dssp ETTEEESSSEEECTTSSCSSHHHHHHHHHSS-CSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHH
T ss_pred ECCEEcCCCcEECCCCCCCCHHHHHHHHHCC-CCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCccHHHHHHHHH
Confidence 5789999999999744223788888777765 8999999999886322111 01111 11
Q ss_pred -cC-CC--CCCEEEEecCCCHHHHHHHHHHHHHCCCC-EEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccC
Q 017176 60 -FS-PE--QHPIVLQIGGSNLDNLAKATELANAYNYD-EINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN 134 (376)
Q Consensus 60 -~~-~~--~~p~~vQL~g~~~~~~~~aa~~~~~~G~d-~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~ 134 (376)
.. +. +.|+++||+|.++++|.+++++++++|+| +||||++||+. .+ |..+..+++.+.++++++++.++
T Consensus 85 ~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~--~g----~~~~g~~~e~~~~iv~~vr~~~~ 158 (311)
T 1jub_A 85 KNQKENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNV--PG----EPQLAYDFEATEKLLKEVFTFFT 158 (311)
T ss_dssp HHHHHTCSSSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCS--SS----CCCGGGCHHHHHHHHHHHTTTCC
T ss_pred HHHHhcCCCCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCC--CC----cccccCCHHHHHHHHHHHHHhcC
Confidence 11 23 78999999999999999999999999999 99999999996 23 33444688999999999999999
Q ss_pred ccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCcc----c--------------cCCCCCCCCCCCCcccHH
Q 017176 135 VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA----L--------------LNGISPAENRTIPPLKYE 196 (376)
Q Consensus 135 ~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~----~--------------~~g~~~~~~~~~~~~~~~ 196 (376)
+||++|++.+++. + ++.+ +++.++++|+|+|++|+++. . ..|.++ ..+.+..++
T Consensus 159 ~Pv~vKi~~~~~~-~---~~~~-~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg---~~~~~~~~~ 230 (311)
T 1jub_A 159 KPLGVKLPPYFDL-V---HFDI-MAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGG---AYIKPTALA 230 (311)
T ss_dssp SCEEEEECCCCSH-H---HHHH-HHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEES---GGGHHHHHH
T ss_pred CCEEEEECCCCCH-H---HHHH-HHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCcccc---ccccHHHHH
Confidence 9999999998732 2 3322 34567789999999998751 0 011111 112234477
Q ss_pred HHHHHHhhCC-CCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhh-CCchhh
Q 017176 197 YYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ-NPWYTL 247 (376)
Q Consensus 197 ~v~~~~~~~~-~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~-~P~lf~ 247 (376)
.++++++.+. ++|||++|||.|++|+.++++.|||+||+||+++. +||+|.
T Consensus 231 ~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~~~p~~~~ 283 (311)
T 1jub_A 231 NVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFD 283 (311)
T ss_dssp HHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHCTHHHH
T ss_pred HHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHhcCcHHHH
Confidence 8888877653 89999999999999999999999999999999996 999863
No 22
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.97 E-value=6.3e-31 Score=252.76 Aligned_cols=231 Identities=16% Similarity=0.152 Sum_probs=175.0
Q ss_pred CCCeecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeeccccc-------------------ccchhhhh---hc
Q 017176 2 VARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIY-------------------QQGNLDRF---LA 59 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~-------------------~~~~~~~~---~~ 59 (376)
+++++++||+++|++..-.+.+++..+...| +|+++|+++++++... .+...+.+ +.
T Consensus 8 i~g~~l~nPi~~Aag~~~~~~~~~~~~~~~G-~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~ 86 (314)
T 2e6f_A 8 LLDHVFANPFMNAAGVLCSTEEDLRCMTASS-SGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYAS 86 (314)
T ss_dssp ETTEEESSSEEECTTSSCSSHHHHHHHHHSS-CSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHH
T ss_pred ECCEecCCCcEECCCCCCCCHHHHHHHHHCC-CCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHHH
Confidence 5789999999999876223567766666664 9999999999886321 11111211 11
Q ss_pred -c-CCCCCCEEEEecCCCHHHHHHHHHHHHHCCCC---EEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccC
Q 017176 60 -F-SPEQHPIVLQIGGSNLDNLAKATELANAYNYD---EINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN 134 (376)
Q Consensus 60 -~-~~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d---~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~ 134 (376)
. ...+.|+++||.|.++++|.+++++++++|+| +||||++||+. .+.+.|| .+++.+.++++++++.++
T Consensus 87 ~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~--~g~~~~g----~~~~~~~~ii~~vr~~~~ 160 (314)
T 2e6f_A 87 DLHDYSKKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV--PGKPQVA----YDFEAMRTYLQQVSLAYG 160 (314)
T ss_dssp HTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS--TTCCCGG----GSHHHHHHHHHHHHHHHC
T ss_pred HHhhcCCCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC--CCchhhc----CCHHHHHHHHHHHHHhcC
Confidence 1 22478999999999999999999999999999 99999999986 2333444 688899999999999889
Q ss_pred ccEEEEecCCCCCCccHHHHHHHHHHHhhcCC-ccEEEEccCcc----cc--------------CCCCCCCCCCCCcccH
Q 017176 135 VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSP-TRHFIIHSRKA----LL--------------NGISPAENRTIPPLKY 195 (376)
Q Consensus 135 ~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~G-vd~I~vh~r~~----~~--------------~g~~~~~~~~~~~~~~ 195 (376)
+||+||++.+++. +++.+ +++.++++| +|+|++|+++. .. .|.++ ..+.+..+
T Consensus 161 ~Pv~vK~~~~~~~----~~~~~-~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg---~~~~p~~~ 232 (314)
T 2e6f_A 161 LPFGVKMPPYFDI----AHFDT-AAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGG---KYILPTAL 232 (314)
T ss_dssp SCEEEEECCCCCH----HHHHH-HHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEES---GGGHHHHH
T ss_pred CCEEEEECCCCCH----HHHHH-HHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCc---ccccHHHH
Confidence 9999999988642 23333 345567899 99999998761 00 11111 11223447
Q ss_pred HHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhh-CCchhh
Q 017176 196 EYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ-NPWYTL 247 (376)
Q Consensus 196 ~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~-~P~lf~ 247 (376)
+.++++++..+++|||++|||+|++|+.++++.|||+||+||+++. +||+|.
T Consensus 233 ~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~~l~~~p~~~~ 285 (314)
T 2e6f_A 233 ANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQVGTALQEEGPGIFT 285 (314)
T ss_dssp HHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEECHHHHHHCTTHHH
T ss_pred HHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchhhHhcCcHHHH
Confidence 7888888775589999999999999999999999999999999996 999863
No 23
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.97 E-value=1e-30 Score=253.81 Aligned_cols=230 Identities=15% Similarity=0.134 Sum_probs=174.9
Q ss_pred CCCeecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecccccc-------------------cchhhhhh----
Q 017176 2 VARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQ-------------------QGNLDRFL---- 58 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~-------------------~~~~~~~~---- 58 (376)
+.|++|+||+++|.-..-.+.++-......| +|.+.+..++.++...+ +...+.++
T Consensus 41 ~~Gl~~~NPv~lAAG~~~~~~e~~~~l~~~G-~G~v~~ktvt~~pq~GNp~PR~~~~~~~~iN~~G~~n~G~~~~~~~l~ 119 (354)
T 4ef8_A 41 LLNNTFANPFMNAAGVMCTTTEELVAMTESA-SGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAYAA 119 (354)
T ss_dssp ETTEEESSSEEECTTSSCSSHHHHHHHHHSS-CSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHHHHHHHH
T ss_pred ECCEECCCCCEeccCCCCCCHHHHHHHHHcC-CCeEEeCcccCcccCCCCCCcEEecchhhhccCCCCCcCHHHHHHHHH
Confidence 4589999999999766544555544444554 88888887776532111 11111111
Q ss_pred ccC-CCCCCEEEEecCCCHHHHHHHHHHHH---HCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccC
Q 017176 59 AFS-PEQHPIVLQIGGSNLDNLAKATELAN---AYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN 134 (376)
Q Consensus 59 ~~~-~~~~p~~vQL~g~~~~~~~~aa~~~~---~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~ 134 (376)
... ..+.|+++||+|.++++|.++|++++ +.|+|+||||++||+.+ + |.+|+.+++.+.+++++|++.++
T Consensus 120 ~~~~~~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~----g--g~~l~~~~e~~~~il~av~~~~~ 193 (354)
T 4ef8_A 120 EQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP----G--KPQVAYDFDAMRQCLTAVSEVYP 193 (354)
T ss_dssp HTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCST----T--SCCGGGSHHHHHHHHHHHHHHCC
T ss_pred HHhhcCCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCC----C--chhhccCHHHHHHHHHHHHHhhC
Confidence 122 23689999999999999999999998 57899999999999863 2 67788999999999999999999
Q ss_pred ccEEEEecCCCCCCccHHHHHHHHHHHhhcCC-ccEEEEcc------------Ccc------ccCCCCCCCCCCCCcccH
Q 017176 135 VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSP-TRHFIIHS------------RKA------LLNGISPAENRTIPPLKY 195 (376)
Q Consensus 135 ~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~G-vd~I~vh~------------r~~------~~~g~~~~~~~~~~~~~~ 195 (376)
+||+||+|++++. . ++.+ ++.+++++| +|+|+++. |+. ..+|+++ ..++|..|
T Consensus 194 ~PV~vKi~p~~d~-~---~~~~-~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG---~~i~p~a~ 265 (354)
T 4ef8_A 194 HSFGVKMPPYFDF-A---HFDA-AAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGG---RYVLPTAL 265 (354)
T ss_dssp SCEEEEECCCCSH-H---HHHH-HHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEG---GGGHHHHH
T ss_pred CCeEEEecCCCCH-H---HHHH-HHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCC---CCCchHHH
Confidence 9999999998742 2 3333 244556788 99998743 321 1233333 34556779
Q ss_pred HHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhC-Cchh
Q 017176 196 EYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN-PWYT 246 (376)
Q Consensus 196 ~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~-P~lf 246 (376)
+.++++++..+++|||++|||.|++|+.+++..|||+||+||+++.| ||+|
T Consensus 266 ~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~~GP~~~ 317 (354)
T 4ef8_A 266 ANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIF 317 (354)
T ss_dssp HHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHH
T ss_pred HHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHHhCHHHH
Confidence 99999988866899999999999999999999999999999999999 9986
No 24
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.97 E-value=1.6e-29 Score=244.71 Aligned_cols=231 Identities=14% Similarity=0.163 Sum_probs=171.9
Q ss_pred CCCeecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecccccc-------------------cchhhhh----h
Q 017176 2 VARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQ-------------------QGNLDRF----L 58 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~-------------------~~~~~~~----~ 58 (376)
+.+++|+||+++|.-..-.+.++...+...| +|.+.+..++.++...+ +...+.+ .
T Consensus 42 ~~Gl~~~NPv~lAaG~~~~~~e~~~~~~~~G-~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n~G~~~~~~~l~ 120 (345)
T 3oix_A 42 IGSFDFDNCLMNAAGVYCMTREELAAIDHSE-AGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPNLGINYYLDYVT 120 (345)
T ss_dssp ETTEEESCSEEECTTSSCSSHHHHHHHHTSS-CSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCBSCHHHHHHHHH
T ss_pred ECCEECCCCCEEcCCCCCCCHHHHHHHHHcC-CCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCChhHHHHHHHHH
Confidence 4689999999999654445666666666665 89999998887642111 0011111 1
Q ss_pred cc--CCCCCCEEEEecCCCHHHHHHHHHHHHHCCCC-EEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCc
Q 017176 59 AF--SPEQHPIVLQIGGSNLDNLAKATELANAYNYD-EINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNV 135 (376)
Q Consensus 59 ~~--~~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d-~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~ 135 (376)
.. ...+.|+++||+|.++++|.++|++++++|+| +||||++||+.+ + |.+|+.+++.+.+++++|++.+++
T Consensus 121 ~~~~~~~~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~----G--~~~l~~~~e~l~~il~av~~~~~~ 194 (345)
T 3oix_A 121 ELQKQPDSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVP----G--XPQIAYDFETTDQILSEVFTYFTK 194 (345)
T ss_dssp HHHHSTTCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCST----T--CCCGGGCHHHHHHHHHHHTTTCCS
T ss_pred HHhhccCCCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcC----C--chhhcCCHHHHHHHHHHHHHHhCC
Confidence 11 34578999999999999999999999999987 999999999864 2 577889999999999999999999
Q ss_pred cEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEE----------EEccCccc------cCCCCCCCCCCCCcccHHHHH
Q 017176 136 PVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHF----------IIHSRKAL------LNGISPAENRTIPPLKYEYYY 199 (376)
Q Consensus 136 pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I----------~vh~r~~~------~~g~~~~~~~~~~~~~~~~v~ 199 (376)
||+||+|+++ +..++++.+. .+...|++.| ++|.++.. .+|+++ +.+.|..++.++
T Consensus 195 PV~vKi~p~~----~~~~~a~~~~-~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG---~ai~p~a~~~v~ 266 (345)
T 3oix_A 195 PLGIKLPPYF----DIVHFDQAAA-IFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGG---DYVKPTALANVH 266 (345)
T ss_dssp CEEEEECCCC----CHHHHHHHHH-HHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEE---GGGHHHHHHHHH
T ss_pred CeEEEECCCC----CHHHHHHHHH-HhCCCceEEEEeecccccceeeccCccccccccccCCcCC---ccccHHHHHHHH
Confidence 9999999973 2344443322 2223445433 35655432 233333 234555688999
Q ss_pred HHHhhCC-CCeEEEecCCCCHHHHHHHHHcCcCeeEEchH-HhhCCchhh
Q 017176 200 ALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRA-AYQNPWYTL 247 (376)
Q Consensus 200 ~~~~~~~-~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa-~l~~P~lf~ 247 (376)
++++.++ ++|||++|||.|++|+.+++++|||+|||||+ ++.+||+|.
T Consensus 267 ~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~~gP~~~~ 316 (345)
T 3oix_A 267 AFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQEGPQIFK 316 (345)
T ss_dssp HHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHHH
T ss_pred HHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHHhcChHHHH
Confidence 9988764 79999999999999999999999999999999 789999863
No 25
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.97 E-value=7.7e-30 Score=247.50 Aligned_cols=228 Identities=14% Similarity=0.116 Sum_probs=167.4
Q ss_pred CCCeecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecccccc---------------------cchhhhhh--
Q 017176 2 VARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQ---------------------QGNLDRFL-- 58 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~---------------------~~~~~~~~-- 58 (376)
+++++++||+++|++. ..+..++..+.+. |+|+++|++++++..... +.....++
T Consensus 49 i~g~~l~npi~~aag~-~~~~~~~~~~a~~-G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~~~ 126 (336)
T 1f76_A 49 CMGLTFKNPLGLAAGL-DKDGECIDALGAM-GFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVEN 126 (336)
T ss_dssp ETTEEESSSEEECTTS-STTCCCHHHHHHT-TCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHHHHHH
T ss_pred ECCEEcCCCcEeCccc-CCcHHHHHHHHHc-CccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHHHHHH
Confidence 5789999999999753 2223355555555 599999999987643110 01111111
Q ss_pred -ccCCCCCCEEEEecCCC-------HHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHh
Q 017176 59 -AFSPEQHPIVLQIGGSN-------LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIA 130 (376)
Q Consensus 59 -~~~~~~~p~~vQL~g~~-------~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~ 130 (376)
.....+.|+++||++++ +++|.++++++.+ |+|+||||++||+.+ |..++++++++.+++++|+
T Consensus 127 ~~~~~~~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~-g~d~iein~~sP~~~-------g~~~~~~~~~~~~il~~vr 198 (336)
T 1f76_A 127 VKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYA-YAGYIAINISSPNTP-------GLRTLQYGEALDDLLTAIK 198 (336)
T ss_dssp HHHCCCCSEEEEEECCCTTSCGGGTHHHHHHHHHHHGG-GCSEEEEECCCSSST-------TGGGGGSHHHHHHHHHHHH
T ss_pred HHhcccCCcEEEEecCCCCCcccccHHHHHHHHHHHhc-cCCEEEEEccCCCCC-------CcccccCHHHHHHHHHHHH
Confidence 11223569999999987 8999999999987 999999999999853 3345578999999999999
Q ss_pred ccc---------CccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccC------------CCCCCCCCC
Q 017176 131 ANT---------NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLN------------GISPAENRT 189 (376)
Q Consensus 131 ~~~---------~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~------------g~~~~~~~~ 189 (376)
+.+ ++||+||++.+++. +++.+ +++.++++|+|+|+||+++.... |.++ ..
T Consensus 199 ~~~~~~~~~~g~~~Pv~vKi~~~~~~----~~~~~-~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g---~~ 270 (336)
T 1f76_A 199 NKQNDLQAMHHKYVPIAVKIAPDLSE----EELIQ-VADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSG---RP 270 (336)
T ss_dssp HHHHHHHHHHTSCCCEEEECCSCCCH----HHHHH-HHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEE---GG
T ss_pred HHHHhhhhcccccCceEEEecCCCCH----HHHHH-HHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCC---ch
Confidence 987 89999999987653 23332 34566789999999998753111 1111 11
Q ss_pred CCcccHHHHHHHHhhCC-CCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhh-CCchhh
Q 017176 190 IPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ-NPWYTL 247 (376)
Q Consensus 190 ~~~~~~~~v~~~~~~~~-~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~-~P~lf~ 247 (376)
+.+..++.++++++.+. ++|||++|||.|++|+.++++.|||+||+||+++. |||+|.
T Consensus 271 ~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~~l~~~P~~~~ 330 (336)
T 1f76_A 271 LQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIK 330 (336)
T ss_dssp GHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEeeHHHHhcCcHHHH
Confidence 11233567777776643 79999999999999999999999999999999998 999964
No 26
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=99.96 E-value=2.9e-29 Score=245.08 Aligned_cols=234 Identities=15% Similarity=0.057 Sum_probs=169.1
Q ss_pred CCCeecCCcEEEccCCC--------CChHHHHHHHHHhCCCcEEEecceeeccccccc---------chhh---hhh-cc
Q 017176 2 VARQYLPPWFSVAPMMD--------WTDNHYRTLARLISKHAWLYTEMLAAETIIYQQ---------GNLD---RFL-AF 60 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~--------~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~---------~~~~---~~~-~~ 60 (376)
||+++|||||++|||.. .|+....++.+.++ .|+++||.+.+....... ..+. ++. .+
T Consensus 10 ig~~~lkNRiv~apm~~~~a~~dg~~t~~~~~~y~~rA~-gGliite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~av 88 (358)
T 4a3u_A 10 FGAFTAKNRIWMAPLTRGRATRDHVPTEIMAEYYAQRAS-AGLIISEATGISQEGLGWPYAPGIWSDAQVEAWLPITQAV 88 (358)
T ss_dssp ETTEEESCSEEECCCCCCCSCTTCCCCHHHHHHHHHTTT-SSSEEEEEEESSTTTCCSTTCCBCSSHHHHHHHHHHHHHH
T ss_pred ECCEEECCceEEcccCCCccCCCCCCCHHHHHHHHHHcC-CCEEEEeeeEECccccCCCCCcccCchHhHHHHHHHHHHH
Confidence 68999999999999964 47788888876555 599999988876432221 1122 222 36
Q ss_pred CCCCCCEEEEecCCC-----------------------------------------------HHHHHHHHHHHHHCCCCE
Q 017176 61 SPEQHPIVLQIGGSN-----------------------------------------------LDNLAKATELANAYNYDE 93 (376)
Q Consensus 61 ~~~~~p~~vQL~g~~-----------------------------------------------~~~~~~aa~~~~~~G~d~ 93 (376)
|..+.++++||++.. .++|++||++++++|||+
T Consensus 89 h~~G~~i~~QL~H~Gr~~~~~~~g~~~~apS~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~~AGFDg 168 (358)
T 4a3u_A 89 HDAGGLIFAQLWHMGRMVPSNVSGMQPVAPSASQAPGLGHTYDGKKPYDVARALRLDEIPRLLDDYEKAARHALKAGFDG 168 (358)
T ss_dssp HHTTCCEEEEEECCGGGCCHHHHSSCCEESSCEECSSEEECSSSEEECCEEEECCGGGHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HhcCCceeeccccccccccccccccCCCCCcccccCCcccccCCCCCCccCccCCHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 888999999997521 368999999999999999
Q ss_pred EEecCC---------CCCccccCCCCccccccCCHHHHHHHHHHHhcccC-ccEEEEecCCC-----CCCccHHHHHHHH
Q 017176 94 INLNCG---------CPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIGV-----DDHDSYNQLCDFI 158 (376)
Q Consensus 94 IeiN~g---------cP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~-~pv~vKiR~g~-----~~~~~~~~~~~~i 158 (376)
||||++ +|.. |.|+|+|||+++||.+++.||+++||+.++ .++.||+...- .+.++.++.+. +
T Consensus 169 VEIH~ahGYLl~QFLSp~t-N~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~-~ 246 (358)
T 4a3u_A 169 VQIHAANGYLIDEFIRDST-NHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEIQGTVDSHPEQVFIP-A 246 (358)
T ss_dssp EEEEECTTSHHHHHHSTTT-CCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCBTTBCCSSTHHHHHH-H
T ss_pred EeecccCCCcHHhceeccc-CCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCcccCCCcccchHHHHHH-H
Confidence 999998 6875 589999999999999999999999999884 45778776521 11122333333 3
Q ss_pred HHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcC-cCeeEEch
Q 017176 159 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHHVMVGR 237 (376)
Q Consensus 159 ~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~G-ad~VmiGR 237 (376)
++.+++.|++.+.++.+..... .+. ...++ +..++++. ...||+ .|++.|+++++++++.| ||+|.+||
T Consensus 247 ~~~~~~~~~~~i~~~~~~~~~~--~~~--~~~~~----~a~~ik~~-~~~~v~-~~g~~~~~~ae~~l~~G~aD~V~~gR 316 (358)
T 4a3u_A 247 AKMLSDLDIAFLGMREGAVDGT--FGK--TDQPK----LSPEIRKV-FKPPLV-LNQDYTFETAQAALDSGVADAISFGR 316 (358)
T ss_dssp HHHHHHHTCSEEEEECCBTTCS--SSB--CSSCC----CHHHHHHH-CCSCEE-EESSCCHHHHHHHHHHTSCSEEEESH
T ss_pred HHhhhccCccccccccccccCc--ccc--cccHH----HHHHHHHh-cCCcEE-EeCCCCHHHHHHHHHcCCceEeHhhH
Confidence 4556788999999987643111 000 11111 12334443 366666 57788999999999955 99999999
Q ss_pred HHhhCCchhhH
Q 017176 238 AAYQNPWYTLG 248 (376)
Q Consensus 238 a~l~~P~lf~~ 248 (376)
++|+||+|..+
T Consensus 317 ~~ladPdlp~k 327 (358)
T 4a3u_A 317 PFIGNPDLPRR 327 (358)
T ss_dssp HHHHCTTHHHH
T ss_pred HHHhChhHHHH
Confidence 99999999643
No 27
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=99.96 E-value=1.4e-29 Score=250.72 Aligned_cols=239 Identities=11% Similarity=0.032 Sum_probs=162.0
Q ss_pred CCCeecCCcEEEccCCC--------CC--hHHHHHHH-HHhCCCcEEEecceeeccccccc---------chhh---hhh
Q 017176 2 VARQYLPPWFSVAPMMD--------WT--DNHYRTLA-RLISKHAWLYTEMLAAETIIYQQ---------GNLD---RFL 58 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~--------~t--d~~~r~~~-~~~Gg~gl~~te~v~~~~~~~~~---------~~~~---~~~ 58 (376)
||+++|||||++|||+. ++ |...++|. |+.||+|+|+||.+.++...... ..+. ++.
T Consensus 23 ig~l~lkNRiv~aPm~~~~a~~~g~v~~~d~~~~yy~~rA~GG~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~ 102 (400)
T 4gbu_A 23 IGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGGYDNAPGVWSEEQMVEWTKIF 102 (400)
T ss_dssp ETTEEESSSEEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEECSCEESSGGGCCCTTSCBSSSHHHHHHHHHHH
T ss_pred ECCEEEcCcCEeCCccCCcCCCCCCCCCHHHHHHHHHHHHcCCeEEEEEcCeEECccccCCCCCCccCCHHHHHHHHHHH
Confidence 68999999999999974 23 45677775 67789999999998876433221 1121 122
Q ss_pred -ccCCCCCCEEEEecCCC--------------------------------------------------HHHHHHHHHHHH
Q 017176 59 -AFSPEQHPIVLQIGGSN--------------------------------------------------LDNLAKATELAN 87 (376)
Q Consensus 59 -~~~~~~~p~~vQL~g~~--------------------------------------------------~~~~~~aa~~~~ 87 (376)
.+|..+.++++||++.. .++|++||++++
T Consensus 103 davH~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~ 182 (400)
T 4gbu_A 103 NAIHEKKSFVWVQLAVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQYIKEYVQAAKNSI 182 (400)
T ss_dssp HHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESCSSCCSCHHHHHHHHHTTCCCEECCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCceEEeeeecCcccCccccccCCCcccCccccccCCCCcccccccCCCCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 36888999999997521 268999999999
Q ss_pred HCCCCEEEecCC---------CCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCC-C-C------CCc
Q 017176 88 AYNYDEINLNCG---------CPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIG-V-D------DHD 149 (376)
Q Consensus 88 ~~G~d~IeiN~g---------cP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g-~-~------~~~ 149 (376)
++|||+||||++ +|.. |.|+|+|||+++||.+++.||+++||+++ ..||.||++.. + + +..
T Consensus 183 ~AGFDgVEIH~AhGYLl~QFLSp~t-N~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d~vgvRlS~~~~~~~~~~~~~~~ 261 (400)
T 4gbu_A 183 AAGADGVEIHSANGYLLNQFLDPHS-NTRTDEYGGSIENRARFTLEVVDALVEAIGHEKVGLRLSPYGVFNSMSGGAETG 261 (400)
T ss_dssp HTTCSEEEEECCTTSHHHHHHCTTT-CCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCGGGSTT
T ss_pred hcCcCeeeecccccchHHheecCcC-CCCccccCCcHHHHHHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCccchhh
Confidence 999999999997 6775 58999999999999999999999999988 35888888752 1 1 111
Q ss_pred cHHHHHHHHHHHhhc---CC--ccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHH
Q 017176 150 SYNQLCDFIYKVSSL---SP--TRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNA 224 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~---~G--vd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~ 224 (376)
.+++....+. .++. .| ++.+++................+.... .+.+++..++|||++|+|.+..++.+
T Consensus 262 ~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ir~~~~~pvi~~G~~~~~~~~~~ 335 (400)
T 4gbu_A 262 IVAQYAYVAG-ELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEGEYEGGS-----NDFVYSIWKGPVIRAGNFALHPEVVR 335 (400)
T ss_dssp HHHHHHHHHH-HHHHHHHTTCCCSEEEEECTTCSSTTSCTTTTCCCSCC-----STHHHHHCCSCEEEESSCTTCHHHHH
T ss_pred hHHHHHHHHH-HHHHhhccCccccceeeecccCCCcccccccchhhhHH-----HHHHHHHhCCCEEEeCCCCChHHHHH
Confidence 2333332222 2221 22 445554332111000000000011111 12223345899999999998777666
Q ss_pred HHH-cCcCeeEEchHHhhCCchhh
Q 017176 225 ALR-KGAHHVMVGRAAYQNPWYTL 247 (376)
Q Consensus 225 ~l~-~Gad~VmiGRa~l~~P~lf~ 247 (376)
.+. .+||+|.+||++|+||+|..
T Consensus 336 ~~~~~~aDlV~~gR~~iadPdl~~ 359 (400)
T 4gbu_A 336 EEVKDKRTLIGYGRFFISNPDLVD 359 (400)
T ss_dssp HHTTSTTEEEECCHHHHHCTTHHH
T ss_pred HHHcCCCeEhHHHHHHHHCcHHHH
Confidence 665 78999999999999999964
No 28
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.96 E-value=1.4e-28 Score=240.35 Aligned_cols=228 Identities=13% Similarity=0.130 Sum_probs=168.6
Q ss_pred CCCeecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecccccc-c--------------------chhhhhhc-
Q 017176 2 VARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQ-Q--------------------GNLDRFLA- 59 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~-~--------------------~~~~~~~~- 59 (376)
+.|++++||+++|.-..-+...++.+.. . |.|.+.+..++.++...+ . ...+.+++
T Consensus 54 ~~Gl~~~NPvglAaG~~~~~~~~~~~~~-~-g~G~v~~ktvt~~pq~GNp~PR~~~~~~~~~~iN~~G~~N~G~~~~~~~ 131 (367)
T 3zwt_A 54 VLGHKFRNPVGIAAGFDKHGEAVDGLYK-M-GFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHR 131 (367)
T ss_dssp ETTEEESSSEEECTTSSTTSSSHHHHHH-T-TCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCCCBCCHHHHHHH
T ss_pred ECCEEcCCCCEeCCCcCCCHHHHHHHHh-c-CcCeEEeCCccCCCCCCCCCCeEEEecCccceeeccCCCCccHHHHHHH
Confidence 4589999999999654333445555543 4 489999998886632111 0 01111110
Q ss_pred cC----------CCCCCEEEEecCC-----CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHH
Q 017176 60 FS----------PEQHPIVLQIGGS-----NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGE 124 (376)
Q Consensus 60 ~~----------~~~~p~~vQL~g~-----~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~e 124 (376)
+. ..+.|+++||+++ ++++|+++++.+.+. +|+||||+|||+.+ |..++.+++.+.+
T Consensus 132 l~~~~~~~~~~~~~~~pv~vniggn~~t~~~~~dy~~~~~~~~~~-ad~ielNisCPn~~-------G~~~l~~~~~l~~ 203 (367)
T 3zwt_A 132 LRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPL-ADYLVVNVSSPNTA-------GLRSLQGKAELRR 203 (367)
T ss_dssp HHTTHHHHHHHHHTTCCEEEEECCCTTCSCHHHHHHHHHHHHGGG-CSEEEEECCCTTST-------TGGGGGSHHHHHH
T ss_pred HHHHhhhccccccCCceEEEEEecCCCCCcCHHHHHHHHHHHhhh-CCEEEEECCCCCCC-------CccccCCHHHHHH
Confidence 11 1357999999996 689999999999874 79999999999863 4457889999999
Q ss_pred HHHHHhcc-------cCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCcccc------------CCCCCC
Q 017176 125 AMSVIAAN-------TNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALL------------NGISPA 185 (376)
Q Consensus 125 iv~~v~~~-------~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~------------~g~~~~ 185 (376)
+++++++. +++||+||+|+++++ +++.+ +++.++++|+|+|++|+++... +|.++
T Consensus 204 ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~-~~~~~----ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG- 277 (367)
T 3zwt_A 204 LLTKVLQERDGLRRVHRPAVLVKIAPDLTS-QDKED----IASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSG- 277 (367)
T ss_dssp HHHHHHHHHHTSCGGGCCEEEEEECSCCCH-HHHHH----HHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEE-
T ss_pred HHHHHHHHHhhccccCCceEEEEeCCCCCH-HHHHH----HHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCC-
Confidence 99999764 689999999998764 22333 3556678999999999886321 22222
Q ss_pred CCCCCCcccHHHHHHHHhhCC-CCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHh-hCCchhh
Q 017176 186 ENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAY-QNPWYTL 247 (376)
Q Consensus 186 ~~~~~~~~~~~~v~~~~~~~~-~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l-~~P~lf~ 247 (376)
..+.+..++.++++++.+. ++|||++|||.|++|+.++++.|||+||+||+++ .+||+|.
T Consensus 278 --~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~l~~gP~~~~ 339 (367)
T 3zwt_A 278 --KPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVG 339 (367)
T ss_dssp --GGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHHH
T ss_pred --cccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEECHHHHhcCcHHHH
Confidence 2334455788899888764 7999999999999999999999999999999995 6799863
No 29
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.96 E-value=6.3e-28 Score=240.26 Aligned_cols=228 Identities=14% Similarity=0.160 Sum_probs=169.5
Q ss_pred CCCeecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeeccccccc---------------------chhhhhhc-
Q 017176 2 VARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQ---------------------GNLDRFLA- 59 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~---------------------~~~~~~~~- 59 (376)
|++++++||+++|++..-....++.+ ...|+|++.++++++++...+. ...+.+.+
T Consensus 86 i~Gl~~~NPvglAAG~dk~~~~~~~l--~~~GfG~v~~gtvT~~pq~GNp~PR~~rl~e~~~iiN~~GfnN~G~~~~~~~ 163 (443)
T 1tv5_A 86 IKHLDFINPFGVAAGFDKNGVCIDSI--LKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKVTEN 163 (443)
T ss_dssp ETTEEESSSEEECTTTTTTCSSHHHH--HTTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCSCBSCHHHHHHH
T ss_pred ECCEEeCCCcEECCcccCccHHHHHH--HhcCCCEEEEeeeecCCCCCCCCccEEeccccceeeeccccCChhHHHHHHH
Confidence 57899999999998875444456664 3346999999999986421100 00111110
Q ss_pred ---cCC--------CCCCEEEEecCCC-----HHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHH
Q 017176 60 ---FSP--------EQHPIVLQIGGSN-----LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVG 123 (376)
Q Consensus 60 ---~~~--------~~~p~~vQL~g~~-----~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~ 123 (376)
... ...|+++||++++ +++|+++++.+.+ ++|+||||++||+.+ |..++++++.+.
T Consensus 164 l~~~~~~~~~~~~~~~~~vgvni~~~~~~~~~~~dy~~~a~~l~~-~aD~ieiNiscPnt~-------Glr~lq~~~~l~ 235 (443)
T 1tv5_A 164 LILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGR-YADYIAINVSSPNTP-------GLRDNQEAGKLK 235 (443)
T ss_dssp HHHHHHHHHHCSTTTTCEEEEEECCCTTCSCHHHHHHHHHHHHGG-GCSEEEEECCCTTST-------TGGGGGSHHHHH
T ss_pred HHHHhhhcccccccCCceEEEEecCcccchHHHHHHHHHHHHHhc-CCCEEEEeccCCCCc-------ccccccCHHHHH
Confidence 000 1468999999998 9999999999988 799999999999863 677888999999
Q ss_pred HHHHHHhcc--------------------------------------------------cCcc-EEEEecCCCCCCccHH
Q 017176 124 EAMSVIAAN--------------------------------------------------TNVP-VSVKCRIGVDDHDSYN 152 (376)
Q Consensus 124 eiv~~v~~~--------------------------------------------------~~~p-v~vKiR~g~~~~~~~~ 152 (376)
+|+++|++. .++| |+||+++++++ +++.
T Consensus 236 ~il~~v~~~~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~-ed~~ 314 (443)
T 1tv5_A 236 NIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQ-EQKK 314 (443)
T ss_dssp HHHHHHHHHHHHHC--------------------------------------CCCCSSSSSCCEEEEEECSCCCH-HHHH
T ss_pred HHHHHHHHHHhhhcccCccccccCHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCCCCH-HHHH
Confidence 999999853 3678 99999998764 2233
Q ss_pred HHHHHHHHHhhcCCccEEEEccCcccc----------CCCCCCCCCCCCcccHHHHHHHHhhCC-CCeEEEecCCCCHHH
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALL----------NGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDE 221 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~----------~g~~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi~nGgI~s~~d 221 (376)
+ +++.++++|+|+|++|+++... +|.++ ..+.+..++.++++++... ++|||++|||.|++|
T Consensus 315 ~----iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG---~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~D 387 (443)
T 1tv5_A 315 E----IADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSG---AKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLD 387 (443)
T ss_dssp H----HHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEE---HHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHH
T ss_pred H----HHHHHHHcCCCEEEEECCCcccccccccccccCCcCC---CcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHH
Confidence 3 3556678999999999987521 11111 1112234677888887653 899999999999999
Q ss_pred HHHHHHcCcCeeEEchHHhh-CCchhh
Q 017176 222 VNAALRKGAHHVMVGRAAYQ-NPWYTL 247 (376)
Q Consensus 222 a~~~l~~Gad~VmiGRa~l~-~P~lf~ 247 (376)
+.++++.|||+||+||+++. +||++.
T Consensus 388 A~e~l~aGAd~Vqigrall~~gP~l~~ 414 (443)
T 1tv5_A 388 ALEKIEAGASVCQLYSCLVFNGMKSAV 414 (443)
T ss_dssp HHHHHHTTEEEEEESHHHHHHGGGHHH
T ss_pred HHHHHHcCCCEEEEcHHHHhcChHHHH
Confidence 99999999999999999886 999863
No 30
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.96 E-value=1.5e-28 Score=235.57 Aligned_cols=228 Identities=20% Similarity=0.270 Sum_probs=165.0
Q ss_pred CCCeecCCcEEEcc-CCCCChHHHHHHHHHhCCCcEEEecceeec---------------------ccccccc-hh-hhh
Q 017176 2 VARQYLPPWFSVAP-MMDWTDNHYRTLARLISKHAWLYTEMLAAE---------------------TIIYQQG-NL-DRF 57 (376)
Q Consensus 2 i~~~~l~nri~lAP-M~~~td~~~r~~~~~~Gg~gl~~te~v~~~---------------------~~~~~~~-~~-~~~ 57 (376)
+++++|+||+++|| |.+.++ +++.++.. +|+|.++|+.+... ++.+... .. ...
T Consensus 11 ~~g~~l~npi~~aag~~~~~~-~~~~~~~~-~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g~~~~~~~~~~~~~ 88 (311)
T 1ep3_A 11 LPGLDLKNPIIPASGCFGFGE-EYAKYYDL-NKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIGLQNPGLEVIMTEK 88 (311)
T ss_dssp ETTEEESSSEEECTTSSTTST-TGGGTSCG-GGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCCCCBCCHHHHHHTH
T ss_pred ECCEECCCCcEECCCCCCCCH-HHHHHHHh-cCCCEEEeCeeccCccCCCCCCeEEECCcccccccCCCCcCHHHHHHHH
Confidence 56899999999999 888775 45444322 45788887755332 2222111 11 111
Q ss_pred h-ccC--CCCCCEEEEecCCCHHHHHHHHHHHHH-CCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc
Q 017176 58 L-AFS--PEQHPIVLQIGGSNLDNLAKATELANA-YNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT 133 (376)
Q Consensus 58 ~-~~~--~~~~p~~vQL~g~~~~~~~~aa~~~~~-~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~ 133 (376)
+ .+. ..+.|+++||+++++++|.++++++++ +|+|+||||++||+.+ .+ |..+..+++++.++++++++.+
T Consensus 89 ~~~~~~~~~~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~-~g----~~~~g~~~~~~~eii~~v~~~~ 163 (311)
T 1ep3_A 89 LPWLNENFPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVK-HG----GQAFGTDPEVAAALVKACKAVS 163 (311)
T ss_dssp HHHHHHHCTTSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGG-GT----TEEGGGCHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCCCCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCC-Cc----hhhhcCCHHHHHHHHHHHHHhc
Confidence 1 122 237899999999999999999999998 9999999999999853 22 4445579999999999999988
Q ss_pred CccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccC---------ccc------cCCCCCCCCCCCCcccHHHH
Q 017176 134 NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR---------KAL------LNGISPAENRTIPPLKYEYY 198 (376)
Q Consensus 134 ~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r---------~~~------~~g~~~~~~~~~~~~~~~~v 198 (376)
++||.+|++.++.+. .++ ++.++++|+|+|++++. +.. ..|.++. ...+..++.+
T Consensus 164 ~~pv~vk~~~~~~~~---~~~----a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~---~~~~~~~~~i 233 (311)
T 1ep3_A 164 KVPLYVKLSPNVTDI---VPI----AKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGP---AIKPVALKLI 233 (311)
T ss_dssp SSCEEEEECSCSSCS---HHH----HHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESG---GGHHHHHHHH
T ss_pred CCCEEEEECCChHHH---HHH----HHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCc---cchHHHHHHH
Confidence 999999999887542 233 33456899999999542 211 0111111 1111224677
Q ss_pred HHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchhh
Q 017176 199 YALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTL 247 (376)
Q Consensus 199 ~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~ 247 (376)
+++++.. ++|||++|||.|++|+.++++.|||+|++||+++.+|+++.
T Consensus 234 ~~i~~~~-~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~~p~~~~ 281 (311)
T 1ep3_A 234 HQVAQDV-DIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFADPFVCP 281 (311)
T ss_dssp HHHHTTC-SSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHHHCTTHHH
T ss_pred HHHHHhc-CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHcCcHHHH
Confidence 7777654 99999999999999999999999999999999999999863
No 31
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.95 E-value=4.4e-27 Score=231.26 Aligned_cols=228 Identities=14% Similarity=0.173 Sum_probs=162.6
Q ss_pred CCCeecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecccccc---------------------cchhhhhh--
Q 017176 2 VARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQ---------------------QGNLDRFL-- 58 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~---------------------~~~~~~~~-- 58 (376)
+.|++++||+++|.-..-+...++.+. +.| +|.+.+..++.++-.-+ +...+.++
T Consensus 88 ~~Gl~f~NPvglAAG~dk~~~~~~~l~-~lG-fG~vevgtvT~~pq~GNp~PRlfrl~e~~aiiN~~GfnN~G~d~~~~~ 165 (415)
T 3i65_A 88 IKHLDFINPFGVAAGFDKNGVCIDSIL-KLG-FSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKVTEN 165 (415)
T ss_dssp ETTEEESSSEEECTTSSTTCSSHHHHH-TTT-CSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCSCBCCHHHHHHH
T ss_pred ECCEECCCCCEECCCCCCCHHHHHHHH-HcC-CCeEEeCcccCCcCCCCCCCeEEeccCCCceeecCCCCchhHHHHHHH
Confidence 468999999999975543333444433 454 88888888776532100 00011111
Q ss_pred --cc---CC-----CCCCEEEEecCCC-----HHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHH
Q 017176 59 --AF---SP-----EQHPIVLQIGGSN-----LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVG 123 (376)
Q Consensus 59 --~~---~~-----~~~p~~vQL~g~~-----~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~ 123 (376)
.. .+ ...++++||+++. +++|.++++++.++ +|+||||++||+.+ |..++++++.+.
T Consensus 166 l~~~~~~~~~~~~~~~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~-ad~ieiNiScPNt~-------Gl~~lq~~~~l~ 237 (415)
T 3i65_A 166 LILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRY-ADYIAINVSSPNTP-------GLRDNQEAGKLK 237 (415)
T ss_dssp HHHHHHHHTTCGGGTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGG-CSEEEEECCCCC---------------CCHHHH
T ss_pred HHHHHhhccccccccCceEEEEeccccCccccHHHHHHHHHHHHhh-CCEEEEECCCCCCC-------CcccccCHHHHH
Confidence 10 01 2457999999987 89999999999987 89999999999863 677889999999
Q ss_pred HHHHHHhcc--------------------cCcc-EEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccc----
Q 017176 124 EAMSVIAAN--------------------TNVP-VSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKAL---- 178 (376)
Q Consensus 124 eiv~~v~~~--------------------~~~p-v~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~---- 178 (376)
+++++|++. ..+| |+||+++++++ +++.+ +++.++++|+|.|++|+++..
T Consensus 238 ~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~-~~i~~----iA~~a~~aGaDgIiv~Ntt~~r~dl 312 (415)
T 3i65_A 238 NIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQ-EQKKE----IADVLLETNIDGMIISNTTTQINDI 312 (415)
T ss_dssp HHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCH-HHHHH----HHHHHHHHTCSEEEECCCBSCCCCC
T ss_pred HHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCH-HHHHH----HHHHHHHcCCcEEEEeCCCcccccc
Confidence 999999875 2689 99999998865 23333 355667899999999998742
Q ss_pred ------cCCCCCCCCCCCCcccHHHHHHHHhhCC-CCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhC-Cchhh
Q 017176 179 ------LNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN-PWYTL 247 (376)
Q Consensus 179 ------~~g~~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~-P~lf~ 247 (376)
.+|.++ ..+.+..++.++++++.+. ++|||++|||.|++|+.++++.|||+|||||+++.+ ||+|.
T Consensus 313 ~~~~~~~GGlSG---~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~~GP~~~~ 386 (415)
T 3i65_A 313 KSFENKKGGVSG---AKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAV 386 (415)
T ss_dssp GGGTTCCSEEEE---GGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEESHHHHHHGGGHHH
T ss_pred cccccccCCcCC---ccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhcCHHHHH
Confidence 122322 2233445678888887754 799999999999999999999999999999999988 99863
No 32
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.94 E-value=2.3e-26 Score=252.43 Aligned_cols=231 Identities=18% Similarity=0.215 Sum_probs=171.2
Q ss_pred CCeecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecccc--cccc----------------------------
Q 017176 3 ARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETII--YQQG---------------------------- 52 (376)
Q Consensus 3 ~~~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~--~~~~---------------------------- 52 (376)
.|+.++||+++|||.+.++.+++..+...| .|++.++.++.+... ...+
T Consensus 538 ~G~~~~nPv~lAa~~~~~~~~~~~~~~~~g-~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~~~~~~~~n~e~~~~~ 616 (1025)
T 1gte_A 538 AGLKFINPFGLASAAPTTSSSMIRRAFEAG-WGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEK 616 (1025)
T ss_dssp TTEEESSSEEECSSGGGSSHHHHHHHHHHT-CSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCSSCCSCEEECCCSCSS
T ss_pred ccccccCcccccCCCCCCCHHHHHHHHHCC-cCeEEeceecccccccCCCCccEEeccccccccCCchhheeeeccccch
Confidence 478999999999999888888888777775 899988877654211 0000
Q ss_pred hh-------hhhhccCCCCCCEEEEe-cCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHH
Q 017176 53 NL-------DRFLAFSPEQHPIVLQI-GGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGE 124 (376)
Q Consensus 53 ~~-------~~~~~~~~~~~p~~vQL-~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~e 124 (376)
.. ..+.+. ..+.|+++|+ +|.++++|.+++++++++|+|+|+||++||+. .+.+.||++++++++.+.+
T Consensus 617 ~~~~~~~~i~~~~~~-~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~--~~~~~~G~~~~~~~~~~~~ 693 (1025)
T 1gte_A 617 TAAYWCQSVTELKAD-FPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG--MGERGMGLACGQDPELVRN 693 (1025)
T ss_dssp CHHHHHHHHHHHHHH-CTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC--CC-----SBGGGCHHHHHH
T ss_pred hHHHHHHHHHHHHhc-CCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC--CCCCCcccccccCHHHHHH
Confidence 00 011111 1256888888 57899999999999999999999999999986 3345689999999999999
Q ss_pred HHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEc----------------------cCccccCCC
Q 017176 125 AMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIH----------------------SRKALLNGI 182 (376)
Q Consensus 125 iv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh----------------------~r~~~~~g~ 182 (376)
+++++++.+++||+||++.+.++ +.++ ++.++++|+|+|+++ +|+. .+|.
T Consensus 694 iv~~v~~~~~~Pv~vK~~~~~~~---~~~~----a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~-~gg~ 765 (1025)
T 1gte_A 694 ICRWVRQAVQIPFFAKLTPNVTD---IVSI----ARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTT-YGGV 765 (1025)
T ss_dssp HHHHHHHHCSSCEEEEECSCSSC---HHHH----HHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBC-CEEE
T ss_pred HHHHHHHhhCCceEEEeCCChHH---HHHH----HHHHHHcCCCEEEEecccccccccccccccccccccccccc-CCCC
Confidence 99999999999999999986653 3333 345568999999994 3322 1122
Q ss_pred CCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchhhH
Q 017176 183 SPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLG 248 (376)
Q Consensus 183 ~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~ 248 (376)
++. ...+..++.++++++.++++|||++|||.|++|+.++++.|||+|||||+++.+||.+.+
T Consensus 766 sg~---~~~~~~~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~~~~~~~~ 828 (1025)
T 1gte_A 766 SGT---AIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQNQDFTVIQ 828 (1025)
T ss_dssp ESG---GGHHHHHHHHHHHHHHSTTCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSCTTHHH
T ss_pred Ccc---cchhHHHHHHHHHHHHcCCCCEEEecCcCCHHHHHHHHHcCCCEEEEeeccccCCccHHH
Confidence 211 112223567888888766899999999999999999999999999999999986653333
No 33
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.92 E-value=1.3e-24 Score=212.57 Aligned_cols=249 Identities=15% Similarity=0.139 Sum_probs=174.2
Q ss_pred CCCeecCCcEEEccCC--CCC----hHHHHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCCCCEEEEecC-C
Q 017176 2 VARQYLPPWFSVAPMM--DWT----DNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGG-S 74 (376)
Q Consensus 2 i~~~~l~nri~lAPM~--~~t----d~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g-~ 74 (376)
+.+.+++.|+++|||+ +++ +..+++.|+++| +.+++++|.+ ..+ +..... ..+.|+++||++ .
T Consensus 74 i~G~~l~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G-~~~~~s~~~s-~~l-------e~v~~~-~~~~~~~~QLy~~~ 143 (368)
T 2nli_A 74 ILGHKIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFG-TIMSISAYSG-ATF-------EEISEG-LNGGPRWFQIYMAK 143 (368)
T ss_dssp ETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHT-CCEEECTTCS-SCH-------HHHHHH-HTTCCEEEEECCBS
T ss_pred ECCEecCCceeecchhhccCCCcHHHHHHHHHHHHcC-CCEEeechHh-HHH-------HHHHHh-CCCCCEEEEEeccC
Confidence 4578899999999998 666 578999999997 7899999886 222 111111 136789999998 7
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCcc-----------------ccC----CCCccccc---c--CCHHHHHHHHHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPK-----------------VAG----HGCFGVSL---M--LDPKFVGEAMSV 128 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~-----------------v~r----~g~yG~~l---~--~~~~~~~eiv~~ 128 (376)
+++...+++++++++||+.|+||++||... +.+ ....|+.+ + .++++..+++++
T Consensus 144 d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~ 223 (368)
T 2nli_A 144 DDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEE 223 (368)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHHH
Confidence 888999999999999999999999999721 110 02236655 2 377888899999
Q ss_pred HhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEcc--CccccCCCCCCCCCCCCcccHHHHHHHHhhCC
Q 017176 129 IAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHS--RKALLNGISPAENRTIPPLKYEYYYALLRDFP 206 (376)
Q Consensus 129 v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~--r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~ 206 (376)
+++.+++||+||.- . +.++ ++.++++|+|+|+|++ +.+... .+..++.+.++++.+.
T Consensus 224 lr~~~~~PvivK~v---~---~~e~-----a~~a~~~Gad~I~vs~~ggr~~~~----------g~~~~~~l~~v~~~v~ 282 (368)
T 2nli_A 224 IAGHSGLPVFVKGI---Q---HPED-----ADMAIKRGASGIWVSNHGARQLYE----------APGSFDTLPAIAERVN 282 (368)
T ss_dssp HHHHSSSCEEEEEE---C---SHHH-----HHHHHHTTCSEEEECCGGGTSCSS----------CCCHHHHHHHHHHHHT
T ss_pred HHHHcCCCEEEEcC---C---CHHH-----HHHHHHcCCCEEEEcCCCcCCCCC----------CCChHHHHHHHHHHhC
Confidence 99999999999942 1 2222 3345689999999954 322211 1234788888876654
Q ss_pred -CCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhCCCCCcccHHHHHHHHHHHHHHHHHhcCCC
Q 017176 207 -DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAPSSGLTRRQVVEKYQIYGDAILGTYGNN 285 (376)
Q Consensus 207 -~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (376)
++|||++|||++++|+.+++..|||+|||||+++... .. .|. ....+.++.+.++.+..+..+|.
T Consensus 283 ~~ipVia~GGI~~g~D~~kalalGAd~V~iGr~~l~~~------~~---~G~----~gv~~~l~~l~~el~~~m~~~G~- 348 (368)
T 2nli_A 283 KRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFGL------AL---GGW----QGAYSVLDYFQKDLTRVMQLTGS- 348 (368)
T ss_dssp TSSCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHH------HH---HHH----HHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHH------Hh---cCh----HHHHHHHHHHHHHHHHHHHHhCC-
Confidence 6999999999999999999999999999999655321 11 121 12234555555555666666775
Q ss_pred chHHHHHHHHH
Q 017176 286 RPHVRDVMKPL 296 (376)
Q Consensus 286 ~~~~~~~~k~~ 296 (376)
..+..+++..
T Consensus 349 -~~i~~l~~~~ 358 (368)
T 2nli_A 349 -QNVEDLKGLD 358 (368)
T ss_dssp -SSHHHHHTCC
T ss_pred -cCHHHhcccc
Confidence 2466666543
No 34
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.91 E-value=2.6e-23 Score=202.51 Aligned_cols=256 Identities=12% Similarity=0.048 Sum_probs=163.8
Q ss_pred CCCeecCCcEEEccCCCCC-------hHHHHHHHHHhCCCcEEEecceeeccccccc-chhhhhhccCCCCCCEEEEec-
Q 017176 2 VARQYLPPWFSVAPMMDWT-------DNHYRTLARLISKHAWLYTEMLAAETIIYQQ-GNLDRFLAFSPEQHPIVLQIG- 72 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~t-------d~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~-~~~~~~~~~~~~~~p~~vQL~- 72 (376)
+.+.++++|+++|||++++ +..++..|.++| ++++++++.+. +.... ....+++.....+.|+++|+.
T Consensus 49 i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G-~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~pv~~~i~~ 125 (349)
T 1p0k_A 49 IGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAG-IPLAVGSQMSA--LKDPSERLSYEIVRKENPNGLIFANLGS 125 (349)
T ss_dssp ETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHT-CCEECCCCTTT--TTCHHHHHHHHHHHHHCSSSCEEEEEET
T ss_pred ECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcC-CcEEeccchhc--ccCcccccceehhhhhCCCceeEEeecC
Confidence 4578899999999999999 778999998887 78877777653 11100 111122222345789999999
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHH--HHHHHHHHhcccCccEEEEec-CCCCCCc
Q 017176 73 GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKF--VGEAMSVIAANTNVPVSVKCR-IGVDDHD 149 (376)
Q Consensus 73 g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~--~~eiv~~v~~~~~~pv~vKiR-~g~~~~~ 149 (376)
+.+++.+.+ .++.+|+|+|+||++||+.... .. | ++++ +.++++++++.+++||.+|+. .+++
T Consensus 126 ~~~~~~~~~---~~~~~gad~i~i~~~~~~~~~~--~~-~-----~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~--- 191 (349)
T 1p0k_A 126 EATAAQAKE---AVEMIGANALQIHLNVIQEIVM--PE-G-----DRSFSGALKRIEQICSRVSVPVIVKEVGFGMS--- 191 (349)
T ss_dssp TCCHHHHHH---HHHHTTCSEEEEEECTTTTC----------------CTTHHHHHHHHHHHCSSCEEEEEESSCCC---
T ss_pred CCCHHHHHH---HHHhcCCCeEEecccchhhhcC--CC-C-----CcchHHHHHHHHHHHHHcCCCEEEEecCCCCC---
Confidence 778876654 4556899999999999975321 11 2 3443 788999999888999999984 4433
Q ss_pred cHHHHHHHHHHHhhcCCccEEEE--ccCcccc-----CCCCCC-CCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHH
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFII--HSRKALL-----NGISPA-ENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE 221 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~v--h~r~~~~-----~g~~~~-~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~d 221 (376)
.++ ++.+.++|+|+|+| ||++... ...... ......+..++.+.++.+..+++|||++|||.+++|
T Consensus 192 -~~~-----a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d 265 (349)
T 1p0k_A 192 -KAS-----AGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALD 265 (349)
T ss_dssp -HHH-----HHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSHHH
T ss_pred -HHH-----HHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCCHHH
Confidence 222 23345789999999 7765210 000000 000111223677777777655899999999999999
Q ss_pred HHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhCCCCCcccHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Q 017176 222 VNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAPSSGLTRRQVVEKYQIYGDAILGTYGNNRPHVRDVMKP 295 (376)
Q Consensus 222 a~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 295 (376)
+.+++..|||+|||||+++..+.. .| .....+.++.+.+..+..+...|. ..+..++++
T Consensus 266 ~~k~l~~GAd~V~iG~~~l~~~~~---------~g----~~~~~~~~~~~~~~l~~~m~~~G~--~~i~el~~~ 324 (349)
T 1p0k_A 266 VAKAIALGASCTGMAGHFLKALTD---------SG----EEGLLEEIQLILEELKLIMTVLGA--RTIADLQKA 324 (349)
T ss_dssp HHHHHHTTCSEEEECHHHHHHHHH---------HH----HHHHHHHHHHHHHHHHHHHHHHTC--CBHHHHTTC
T ss_pred HHHHHHcCCCEEEEcHHHHHHHhh---------cC----HHHHHHHHHHHHHHHHHHHHHhCC--CCHHHHhhC
Confidence 999999999999999987765421 11 112234455555555555666675 245555554
No 35
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.90 E-value=1.4e-22 Score=197.70 Aligned_cols=232 Identities=15% Similarity=0.132 Sum_probs=154.6
Q ss_pred CCCeecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecccccc-------------------cchhhhhh----
Q 017176 2 VARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQ-------------------QGNLDRFL---- 58 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~-------------------~~~~~~~~---- 58 (376)
+.|++|+|||++|.-..-.+.++-......| +|.+.+..++.++...+ +...+.++
T Consensus 41 ~~Gl~f~NPvglAaG~~~~~~e~~~~l~~~G-~G~v~~~tvt~~pq~GNp~PR~~~l~~~~iN~~G~~n~G~~~~~~~~~ 119 (354)
T 3tjx_A 41 LLNNTFANPFMNAAGVMCTTTEELVAMTESA-SGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAYAA 119 (354)
T ss_dssp ETTEEESSSEEECTTSSCSSHHHHHHHHHSS-CSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHHHHHHHH
T ss_pred ECCEEcCCCcEEccCCCCCCHHHHHHHHHcC-CCEEEeCCcCcccccCCCCCeEEEcccccccccccCCHHHHHHHHHHH
Confidence 3578999999999643233444444444554 88888887776532111 11111111
Q ss_pred -ccCCCCCCEEEEecCCCHHHHHHHHHHHHHC---CCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccC
Q 017176 59 -AFSPEQHPIVLQIGGSNLDNLAKATELANAY---NYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN 134 (376)
Q Consensus 59 -~~~~~~~p~~vQL~g~~~~~~~~aa~~~~~~---G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~ 134 (376)
.....+.|+++|++|.+++++.+.++.+.++ ++|+||||++||+.+ . |..+..+++.+.++++++++.+.
T Consensus 120 ~~~~~~~~pvivsi~g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~-----g-~~~l~~~~~~~~~i~~~v~~~~~ 193 (354)
T 3tjx_A 120 EQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP-----G-KPQVAYDFDAMRQCLTAVSEVYP 193 (354)
T ss_dssp HTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC---------------CTTSHHHHHHHHHHHHHHCC
T ss_pred HhhccCCceEEEEEecCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCc-----c-hhhhccCHHHHHHHHHHHHHHhh
Confidence 1233467999999999999988888776553 689999999999853 2 56777899999999999999999
Q ss_pred ccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEc----------cCcc--------ccCCCCCCCCCCCCcccHH
Q 017176 135 VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIH----------SRKA--------LLNGISPAENRTIPPLKYE 196 (376)
Q Consensus 135 ~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh----------~r~~--------~~~g~~~~~~~~~~~~~~~ 196 (376)
.|+.+|+++++++. ...... ..+.+..+++.++.- .++. ..+|.++ ..+.+...+
T Consensus 194 ~pv~vK~~p~~~~~-~~~~~~---~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG---~~~~~~a~~ 266 (354)
T 3tjx_A 194 HSFGVKMPPYFDFA-AFDAAA---EILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGG---RYVLPTALA 266 (354)
T ss_dssp SCEEEEECCCCSHH-HHHHHH---HHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEG---GGGHHHHHH
T ss_pred cccccccCCCCCch-hHHHHH---HHHHhhcccchhheecccccccccccccccccccCcccccccCc---hhhHHHHHH
Confidence 99999999988652 222222 122233455544321 1111 1123333 223344466
Q ss_pred HHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHh-hCCchhh
Q 017176 197 YYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAY-QNPWYTL 247 (376)
Q Consensus 197 ~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l-~~P~lf~ 247 (376)
.++++.+..+++|||++|||.|++|+.+++.+|||+||||||++ .+|++|.
T Consensus 267 ~v~~~~~~~~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y~GP~~~~ 318 (354)
T 3tjx_A 267 NINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFE 318 (354)
T ss_dssp HHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHH
T ss_pred HHHHHHHhcCCCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhhcCchHHH
Confidence 77788777778999999999999999999999999999999976 6799863
No 36
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.90 E-value=7.2e-23 Score=201.72 Aligned_cols=209 Identities=15% Similarity=0.147 Sum_probs=151.5
Q ss_pred CCCeecCCcEEEccCCCCChH-------HHHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCCCCEEEEecC-
Q 017176 2 VARQYLPPWFSVAPMMDWTDN-------HYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGG- 73 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td~-------~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g- 73 (376)
+.+.+++.|+++||| ++++. .+++.|+++| ..+++++|.+ ..+ +..... ..+.|+++||++
T Consensus 88 i~G~~l~~Pi~iAPm-g~~~l~~~~~e~~laraA~~~G-~~~~~s~~~s-~~l-------e~v~~~-~~~~~~~~QLy~~ 156 (392)
T 2nzl_A 88 VLGQRVSMPICVGAT-AMQRMAHVDGELATVRACQSLG-TGMMLSSWAT-SSI-------EEVAEA-GPEALRWLQLYIY 156 (392)
T ss_dssp ETTEEESSSEEECCC-SCGGGTSTTHHHHHHHHHHHHT-CEEEECTTCS-SCH-------HHHHHH-CTTSEEEEEECCB
T ss_pred ECCEecCCceEeccc-cccccccchHHHHHHHHHHHcC-CCeeccchHH-HHH-------HHHHHh-cCCCcEEEEEEec
Confidence 457889999999999 65544 4899999997 7888888875 211 112111 236789999998
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCc---------------ccc-CC--------------CCccc---cccC---
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSP---------------KVA-GH--------------GCFGV---SLML--- 117 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~---------------~v~-r~--------------g~yG~---~l~~--- 117 (376)
.+++...+.+++++++|++.|+||++||.. ++. ++ +. |+ .++.
T Consensus 157 ~d~~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~-g~~~~~~~~~~~ 235 (392)
T 2nzl_A 157 KDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGD-DSGLAAYVAKAI 235 (392)
T ss_dssp SSHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC------------------CHHHHHHHHB
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccC-cchHHHHHhhcC
Confidence 688899999999999999999999999984 220 00 11 22 2333
Q ss_pred CHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHH
Q 017176 118 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 197 (376)
Q Consensus 118 ~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~ 197 (376)
++++..+.++++++.+++||.+|. +. +.++ ++.++++|+|+|+|+++...+. ...+..++.
T Consensus 236 d~~~~~~~i~~lr~~~~~PvivKg---v~---~~e~-----A~~a~~aGad~I~vs~~ggr~~--------~~g~~~~~~ 296 (392)
T 2nzl_A 236 DPSISWEDIKWLRRLTSLPIVAKG---IL---RGDD-----AREAVKHGLNGILVSNHGARQL--------DGVPATIDV 296 (392)
T ss_dssp CTTCCHHHHHHHC--CCSCEEEEE---EC---CHHH-----HHHHHHTTCCEEEECCGGGTSS--------TTCCCHHHH
T ss_pred ChHHHHHHHHHHHHhhCCCEEEEe---cC---CHHH-----HHHHHHcCCCEEEeCCCCCCcC--------CCCcChHHH
Confidence 777788899999999999999994 32 2222 3345689999999965432111 012234778
Q ss_pred HHHHHhhCC-CCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhh
Q 017176 198 YYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 241 (376)
Q Consensus 198 v~~~~~~~~-~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~ 241 (376)
+.++++.+. ++|||++|||++++|+.+++..|||+|||||+++.
T Consensus 297 l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~ 341 (392)
T 2nzl_A 297 LPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVW 341 (392)
T ss_dssp HHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHH
Confidence 888876643 69999999999999999999999999999997664
No 37
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.89 E-value=1.3e-22 Score=198.96 Aligned_cols=247 Identities=15% Similarity=0.170 Sum_probs=172.9
Q ss_pred CCCeecCCcEEEccCCCCChHH-------HHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCCCCEEEEec-C
Q 017176 2 VARQYLPPWFSVAPMMDWTDNH-------YRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIG-G 73 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td~~-------~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~-g 73 (376)
+.+.+++.|+++||| ++++.. ++..|+++| ..+++++|.+.. .+.+....+ .|..+||+ +
T Consensus 65 i~G~~~~~Pi~iAPm-g~~~l~~~~~e~a~a~aa~~~G-~~~~~s~~~~~~--------ieev~~~~~--~~~~~QLy~~ 132 (370)
T 1gox_A 65 ILGFKISMPIMIAPT-AMQKMAHPEGEYATARAASAAG-TIMTLSSWATSS--------VEEVASTGP--GIRFFQLYVY 132 (370)
T ss_dssp ETTEEESSSEEECCC-SCGGGTCTTHHHHHHHHHHHTT-CCEEECTTCSSC--------HHHHHTTCC--CCEEEEECCB
T ss_pred ECCcccCCceeEccc-chhhhccchHHHHHHHHHHHcC-CCeeccCCCCCC--------HHHHHhhcC--CCceEEEecC
Confidence 457889999999999 777665 999999997 788888877531 222222222 78999997 7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCc---------------cc-----cC-------CCCccccc------cCCHH
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSP---------------KV-----AG-------HGCFGVSL------MLDPK 120 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~---------------~v-----~r-------~g~yG~~l------~~~~~ 120 (376)
.+++...+.+++++++|++.|+||++||.. ++ .. ... |+.+ +.+++
T Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~-g~~~~~~v~~~~~~~ 211 (370)
T 1gox_A 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKAN-DSGLSSYVAGQIDRS 211 (370)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC----------HHHHHHHTBCTT
T ss_pred CCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhcccccc-CccHHHHHHhhcCcc
Confidence 889888999999999999999999999964 11 11 112 4444 44666
Q ss_pred HHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEE--ccCccccCCCCCCCCCCCCcccHHHH
Q 017176 121 FVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII--HSRKALLNGISPAENRTIPPLKYEYY 198 (376)
Q Consensus 121 ~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~v--h~r~~~~~g~~~~~~~~~~~~~~~~v 198 (376)
+..+.++++++.+++||.+|.... .++ ++.+.++|+|+|+| |++.+... .+..++.+
T Consensus 212 ~~~~~i~~l~~~~~~pv~vK~~~~------~e~-----a~~a~~~Gad~I~vs~~ggr~~~~----------~~~~~~~l 270 (370)
T 1gox_A 212 LSWKDVAWLQTITSLPILVKGVIT------AED-----ARLAVQHGAAGIIVSNHGARQLDY----------VPATIMAL 270 (370)
T ss_dssp CCHHHHHHHHHHCCSCEEEECCCS------HHH-----HHHHHHTTCSEEEECCGGGTSSTT----------CCCHHHHH
T ss_pred chHHHHHHHHHHhCCCEEEEecCC------HHH-----HHHHHHcCCCEEEECCCCCccCCC----------cccHHHHH
Confidence 667889999998999999998742 222 23345799999999 54322111 12347888
Q ss_pred HHHHhhCC-CCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhCCCCCcccHHHHHHHHHHHHHH
Q 017176 199 YALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAPSSGLTRRQVVEKYQIYGDA 277 (376)
Q Consensus 199 ~~~~~~~~-~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 277 (376)
.++++..+ ++|||++|||.+++|+.++++.|||+|||||+++.... . .| .....+.++.+.+..+.
T Consensus 271 ~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~~~~------~---~G----~~gv~~~~~~l~~el~~ 337 (370)
T 1gox_A 271 EEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLA------A---EG----EAGVKKVLQMMRDEFEL 337 (370)
T ss_dssp HHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHH------H---HH----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHHHHh------h---cc----HHHHHHHHHHHHHHHHH
Confidence 88877654 79999999999999999999999999999998764321 0 11 11223455566666666
Q ss_pred HHHhcCCCchHHHHHHHHHH
Q 017176 278 ILGTYGNNRPHVRDVMKPLL 297 (376)
Q Consensus 278 ~~~~~~~~~~~~~~~~k~~~ 297 (376)
.+..+|. ..+..++++..
T Consensus 338 ~m~~~G~--~~i~el~~~~l 355 (370)
T 1gox_A 338 TMALSGC--RSLKEISRSHI 355 (370)
T ss_dssp HHHHHTC--SBTTTCCGGGE
T ss_pred HHHHhCC--CCHHHhhhcce
Confidence 6667775 24555666554
No 38
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.89 E-value=3.2e-22 Score=203.26 Aligned_cols=251 Identities=13% Similarity=0.108 Sum_probs=172.0
Q ss_pred CCCeecCCcEEEccCCC---C----ChHHHHHHHHH--hCCCcEEEecceeecccccccchhhhhhccC-CCCCCEEEEe
Q 017176 2 VARQYLPPWFSVAPMMD---W----TDNHYRTLARL--ISKHAWLYTEMLAAETIIYQQGNLDRFLAFS-PEQHPIVLQI 71 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~---~----td~~~r~~~~~--~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~-~~~~p~~vQL 71 (376)
|.|.++++|+++|||++ . ++..+++.|++ +| +++++++|.+.. ...+.... ..+.|..+||
T Consensus 183 i~G~~l~~Pi~iAPma~~~l~~~~~~e~alaraA~~~~~G-~~~~~s~~a~~s--------~e~v~~~~~~~~~~~~~QL 253 (511)
T 1kbi_A 183 MLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTK-VPQMISTLASCS--------PEEIIEAAPSDKQIQWYQL 253 (511)
T ss_dssp ETTEEESSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSC-CCEEECTTCSSC--------HHHHHHTCCCSSCCEEEEE
T ss_pred cCCccCCCCeEeccchhccccChhhHHHHHHHHHHHhCCC-eeEEeCCcccCC--------HHHHHhhcCCCCCCeEEEE
Confidence 45788999999999997 3 47889999998 87 789888884421 11122222 2457899999
Q ss_pred c-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCc----------------cccC-----CCCccc--ccc---CCHHHHHH
Q 017176 72 G-GSNLDNLAKATELANAYNYDEINLNCGCPSP----------------KVAG-----HGCFGV--SLM---LDPKFVGE 124 (376)
Q Consensus 72 ~-g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~----------------~v~r-----~g~yG~--~l~---~~~~~~~e 124 (376)
+ +.+++.+.+++++++++||++|.||++||+. ++.. .+.+++ .++ .++++..+
T Consensus 254 y~~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~ 333 (511)
T 1kbi_A 254 YVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWK 333 (511)
T ss_dssp CCCSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHH
T ss_pred eecCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHHH
Confidence 8 8889999999999999999999999999971 1110 111121 223 57888889
Q ss_pred HHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEE--ccCccccCCCCCCCCCCCCcccHHHHHHHH
Q 017176 125 AMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII--HSRKALLNGISPAENRTIPPLKYEYYYALL 202 (376)
Q Consensus 125 iv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~v--h~r~~~~~g~~~~~~~~~~~~~~~~v~~~~ 202 (376)
+++++++.+++||++|. +.. .++ ++.++++|+|+|+| ||+++...+ +..++.+.+++
T Consensus 334 ~i~~lr~~~~~PvivKg---v~~---~e~-----A~~a~~aGad~I~vs~hgG~~~d~~----------~~~~~~l~~v~ 392 (511)
T 1kbi_A 334 DIEELKKKTKLPIVIKG---VQR---TED-----VIKAAEIGVSGVVLSNHGGRQLDFS----------RAPIEVLAETM 392 (511)
T ss_dssp HHHHHHHHCSSCEEEEE---ECS---HHH-----HHHHHHTTCSEEEECCTTTTSSTTC----------CCHHHHHHHHH
T ss_pred HHHHHHHHhCCcEEEEe---CCC---HHH-----HHHHHHcCCCEEEEcCCCCccCCCC----------CchHHHHHHHH
Confidence 99999999999999993 322 222 33456899999999 555532211 12367777766
Q ss_pred hhC------CCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhCCCCCcccHHHHHHHHHHHHH
Q 017176 203 RDF------PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAPSSGLTRRQVVEKYQIYGD 276 (376)
Q Consensus 203 ~~~------~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 276 (376)
+.+ .++|||++|||++++|+.++|..|||+|||||+++..... .|. ....+.++.+.+..+
T Consensus 393 ~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~~l~~~~~---------~G~----~gv~~~l~~l~~el~ 459 (511)
T 1kbi_A 393 PILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSC---------YGR----NGVEKAIEILRDEIE 459 (511)
T ss_dssp HHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHH---------HHH----HHHHHHHHHHHHHHH
T ss_pred HHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHh---------cCh----HHHHHHHHHHHHHHH
Confidence 543 3799999999999999999999999999999966632211 121 122344555555555
Q ss_pred HHHHhcCCCchHHHHHHHHHH
Q 017176 277 AILGTYGNNRPHVRDVMKPLL 297 (376)
Q Consensus 277 ~~~~~~~~~~~~~~~~~k~~~ 297 (376)
..+...|. ..+..+++++.
T Consensus 460 ~~m~~~G~--~~i~el~~~~l 478 (511)
T 1kbi_A 460 MSMRLLGV--TSIAELKPDLL 478 (511)
T ss_dssp HHHHHHTC--CBGGGCCGGGE
T ss_pred HHHHHhCC--CcHHHHhHHHh
Confidence 55666664 23445555543
No 39
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.86 E-value=4.9e-21 Score=185.25 Aligned_cols=192 Identities=13% Similarity=0.025 Sum_probs=146.8
Q ss_pred ecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCCCCEEEEecCCCHHHHHHHHHH
Q 017176 6 YLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAKATEL 85 (376)
Q Consensus 6 ~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~~~~~~~aa~~ 85 (376)
.+++||++|||.++|+..++..+.+.||.|++.+++++.+.+......+.++ .+.|+++|++..+++ +.+.++.
T Consensus 10 ~~~~Pii~apM~g~s~~~la~av~~aG~lG~i~~~~~~~~~~~~~i~~i~~~-----~~~p~gvnl~~~~~~-~~~~~~~ 83 (332)
T 2z6i_A 10 KIDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSL-----TDKPFGVNIMLLSPF-VEDIVDL 83 (332)
T ss_dssp TCSSSEEECCCTTTCCHHHHHHHHHHTSBEEEECTTCCHHHHHHHHHHHHHH-----CCSCEEEEECTTSTT-HHHHHHH
T ss_pred CCCCCEEeCCCCCCCcHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHh-----cCCCEEEEecCCCCC-HHHHHHH
Confidence 4789999999999999999999988898899999987766443222222222 357999999986654 7788888
Q ss_pred HHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcC
Q 017176 86 ANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLS 165 (376)
Q Consensus 86 ~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~ 165 (376)
+.++|+|+|++|+|||.. +++.+++ .++|+.+|+. +.++ ++.+++.
T Consensus 84 a~~~g~d~V~~~~g~p~~---------------------~i~~l~~-~g~~v~~~v~-------~~~~-----a~~~~~~ 129 (332)
T 2z6i_A 84 VIEEGVKVVTTGAGNPSK---------------------YMERFHE-AGIIVIPVVP-------SVAL-----AKRMEKI 129 (332)
T ss_dssp HHHTTCSEEEECSSCGGG---------------------THHHHHH-TTCEEEEEES-------SHHH-----HHHHHHT
T ss_pred HHHCCCCEEEECCCChHH---------------------HHHHHHH-cCCeEEEEeC-------CHHH-----HHHHHHc
Confidence 999999999999998731 3455554 3789988862 2222 2234579
Q ss_pred CccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCch
Q 017176 166 PTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 166 Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
|+|+|.+++... +|..+ ....++.+.++++.. ++|||++|||.|++++.++++.|||+|++||+++.+|..
T Consensus 130 GaD~i~v~g~~~--GG~~g------~~~~~~ll~~i~~~~-~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~~e~ 200 (332)
T 2z6i_A 130 GADAVIAEGMEA--GGHIG------KLTTMTLVRQVATAI-SIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKES 200 (332)
T ss_dssp TCSCEEEECTTS--SEECC------SSCHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTBTTC
T ss_pred CCCEEEEECCCC--CCCCC------CccHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcCccc
Confidence 999999998642 22211 123478888887765 899999999999999999999999999999999999965
Q ss_pred h
Q 017176 246 T 246 (376)
Q Consensus 246 f 246 (376)
.
T Consensus 201 ~ 201 (332)
T 2z6i_A 201 N 201 (332)
T ss_dssp C
T ss_pred c
Confidence 3
No 40
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.85 E-value=1.4e-20 Score=182.15 Aligned_cols=217 Identities=16% Similarity=0.102 Sum_probs=141.5
Q ss_pred CCCeecCCcEEEccCCCCCh------HHHHHHHHHhCCCcEEEecceeeccccc-ccchhhhhhccCCCCCCEE-----E
Q 017176 2 VARQYLPPWFSVAPMMDWTD------NHYRTLARLISKHAWLYTEMLAAETIIY-QQGNLDRFLAFSPEQHPIV-----L 69 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td------~~~r~~~~~~Gg~gl~~te~v~~~~~~~-~~~~~~~~~~~~~~~~p~~-----v 69 (376)
+.+.++++|+++|||++.++ ..++..|+++| .++++++|.++ +.. ......++ .....+.|++ .
T Consensus 52 i~g~~l~~P~~iapm~g~~~~~~~~~~~la~~a~~~G-~~~~~~~~~~~--le~~~~~~~~ql-~~~~~d~pv~~~~~~~ 127 (332)
T 1vcf_A 52 FLGKTLKAPFLIGAMTGGEENGERINLALAEAAEALG-VGMMLGSGRIL--LERPEALRSFRV-RKVAPKALLIANLGLA 127 (332)
T ss_dssp ETTEEESSSEEECCCC---CCHHHHHHHHHHHHHHHT-CEEEEEECHHH--HHCTTTHHHHCC-TTTCSSSCEEEEEEGG
T ss_pred ECCcccCCceEEeccccCCcchhHHHHHHHHHHHHcC-CCEEeCCchhc--ccCCCccceEEe-eccCCCceeecccChh
Confidence 46778999999999998764 48889999997 78999998775 222 11111122 2223467876 6
Q ss_pred EecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEE-ecCCCCCC
Q 017176 70 QIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVK-CRIGVDDH 148 (376)
Q Consensus 70 QL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vK-iR~g~~~~ 148 (376)
|+++.+++.+.++++.+ ++|++++|..+...... + |. .+.+.+.++++++++ +++||++| +..|+
T Consensus 128 q~~~~~~~~~~~a~~~~---~~~a~~i~~n~~~~~~~--~--~~---~~~~~~~~~i~~vr~-~~~Pv~vK~v~~g~--- 193 (332)
T 1vcf_A 128 QLRRYGRDDLLRLVEML---EADALAFHVNPLQEAVQ--R--GD---TDFRGLVERLAELLP-LPFPVMVKEVGHGL--- 193 (332)
T ss_dssp GGGTCCHHHHHHHHHHH---TCSEEEEECCHHHHHHT--T--SC---CCCTTHHHHHHHHCS-CSSCEEEECSSSCC---
T ss_pred hhhccChHHHHHHHhhc---CCCceeeccchHHHHhc--C--CC---ccHHHHHHHHHHHHc-CCCCEEEEecCCCC---
Confidence 67777888888877654 56877776543321111 1 11 111237889999999 99999999 54332
Q ss_pred ccHHHHHHHHHHHhhcCCccEEEE--ccCcc-------ccCCCCCCCC-CCCCcccHHHHHHHHhhCCCCeEEEecCCCC
Q 017176 149 DSYNQLCDFIYKVSSLSPTRHFII--HSRKA-------LLNGISPAEN-RTIPPLKYEYYYALLRDFPDLTFTLNGGINT 218 (376)
Q Consensus 149 ~~~~~~~~~i~~~~e~~Gvd~I~v--h~r~~-------~~~g~~~~~~-~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s 218 (376)
+.++ ++.++++|+|+|+| |+++. .......... ....+..++.+.++++...++|||++|||.+
T Consensus 194 -~~e~-----a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~ 267 (332)
T 1vcf_A 194 -SREA-----ALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVYT 267 (332)
T ss_dssp -CHHH-----HHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEESSCCS
T ss_pred -CHHH-----HHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEECCCCC
Confidence 2332 33567899999999 65531 1100000000 0112234777888877655799999999999
Q ss_pred HHHHHHHHHcCcCeeEEchHHhhC
Q 017176 219 VDEVNAALRKGAHHVMVGRAAYQN 242 (376)
Q Consensus 219 ~~da~~~l~~Gad~VmiGRa~l~~ 242 (376)
++|+.+++..|||+||+||+++..
T Consensus 268 ~~d~~kal~~GAd~V~igr~~l~~ 291 (332)
T 1vcf_A 268 GTDGAKALALGADLLAVARPLLRP 291 (332)
T ss_dssp HHHHHHHHHHTCSEEEECGGGHHH
T ss_pred HHHHHHHHHhCCChHhhhHHHHHH
Confidence 999999999999999999987643
No 41
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.82 E-value=1.2e-19 Score=178.31 Aligned_cols=248 Identities=16% Similarity=0.072 Sum_probs=169.1
Q ss_pred CCCeecCCcEEEccCCC--C----ChHHHHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCCCCEEEEecCCC
Q 017176 2 VARQYLPPWFSVAPMMD--W----TDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSN 75 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~--~----td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~ 75 (376)
+.+.++++|+++|||++ . ++..+++.|+++| +++++++ ++..++. ..... .+.+..+||+...
T Consensus 66 i~G~~l~~Pv~iap~~~~~~~~~~~~~~~a~aa~~~G-~~~~vss-~s~~~le-------~i~~~--~~~~~~fQly~~~ 134 (380)
T 1p4c_A 66 VLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAG-IPFVLST-ASNMSIE-------DLARQ--CDGDLWFQLYVIH 134 (380)
T ss_dssp ETTEEESSSEEECCCSCGGGTSTTHHHHHHHHHHHHT-CCEEECT-TCSSCHH-------HHHHH--CCSCEEEEECCSS
T ss_pred ECCeecCCceEecCccccccCCCcHHHHHHHHHHHcC-CCeecCc-cccCCHH-------HHHhc--cCCCeEEEEEech
Confidence 45789999999999976 4 7889999999997 7888876 3322221 11111 3578999998655
Q ss_pred HHHHHHHHHHHHHCCCCEEEe--------------cCCCCCcc---cc-------CC--CCccccc---cC---CHHHHH
Q 017176 76 LDNLAKATELANAYNYDEINL--------------NCGCPSPK---VA-------GH--GCFGVSL---ML---DPKFVG 123 (376)
Q Consensus 76 ~~~~~~aa~~~~~~G~d~Iei--------------N~gcP~~~---v~-------r~--g~yG~~l---~~---~~~~~~ 123 (376)
++...+..++++++|++.+.| |.||+.+. .. +. ..-+.++ +. +|++..
T Consensus 135 ~~~~~~~i~~a~~aG~~al~vTvd~p~~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~~~ 214 (380)
T 1p4c_A 135 REIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNW 214 (380)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTCCH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeecCccccchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccccH
Confidence 666777888889999998876 45775331 10 00 0101222 22 677788
Q ss_pred HHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEE--ccCccccCCCCCCCCCCCCcccHHHHHHH
Q 017176 124 EAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII--HSRKALLNGISPAENRTIPPLKYEYYYAL 201 (376)
Q Consensus 124 eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~v--h~r~~~~~g~~~~~~~~~~~~~~~~v~~~ 201 (376)
++++++++.+++||.+|. +. +.++ ++.+.++|+|.|+| |++++...+ +..++.+.++
T Consensus 215 ~~i~~i~~~~~~Pv~vkg---v~---t~e~-----a~~a~~aGad~I~vs~~gg~~~d~~----------~~~~~~l~~v 273 (380)
T 1p4c_A 215 EALRWLRDLWPHKLLVKG---LL---SAED-----ADRCIAEGADGVILSNHGGRQLDCA----------ISPMEVLAQS 273 (380)
T ss_dssp HHHHHHHHHCCSEEEEEE---EC---CHHH-----HHHHHHTTCSEEEECCGGGTSCTTC----------CCGGGTHHHH
T ss_pred HHHHHHHHhcCCCEEEEe---cC---cHHH-----HHHHHHcCCCEEEEcCCCCCcCCCC----------cCHHHHHHHH
Confidence 999999999999999994 32 2332 23345799999999 766543222 1236677777
Q ss_pred HhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhCCCCCcccHHHHHHHHHHHHHHHHHh
Q 017176 202 LRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAPSSGLTRRQVVEKYQIYGDAILGT 281 (376)
Q Consensus 202 ~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (376)
++.+ ++|||++|||.+++|+.+++..|||+||+||+++.... . .| .....+.++.+.+..+..+..
T Consensus 274 ~~~~-~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~~~~------~---~g----~~~v~~~~~~l~~el~~~m~~ 339 (380)
T 1p4c_A 274 VAKT-GKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLYGLA------A---RG----ETGVDEVLTLLKADIDRTLAQ 339 (380)
T ss_dssp HHHH-CSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHHHHH------H---HH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHc-CCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHHHHH------h---cC----HHHHHHHHHHHHHHHHHHHHH
Confidence 7665 67999999999999999999999999999999975321 0 12 122345566666666666777
Q ss_pred cCCCchHHHHHHHHHH
Q 017176 282 YGNNRPHVRDVMKPLL 297 (376)
Q Consensus 282 ~~~~~~~~~~~~k~~~ 297 (376)
+|. ..+..++++..
T Consensus 340 ~G~--~~i~el~~~~l 353 (380)
T 1p4c_A 340 IGC--PDITSLSPDYL 353 (380)
T ss_dssp HTC--CBGGGCCGGGE
T ss_pred hCC--CCHHHhccCeE
Confidence 775 24666677644
No 42
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.79 E-value=5.8e-19 Score=172.29 Aligned_cols=215 Identities=16% Similarity=0.134 Sum_probs=140.8
Q ss_pred CCCeecCCcEEEccCCCCChHH------HHHHHHHhCCCcEEEecceee--cccccccchhhhhhccCCCCCCEEEEec-
Q 017176 2 VARQYLPPWFSVAPMMDWTDNH------YRTLARLISKHAWLYTEMLAA--ETIIYQQGNLDRFLAFSPEQHPIVLQIG- 72 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td~~------~r~~~~~~Gg~gl~~te~v~~--~~~~~~~~~~~~~~~~~~~~~p~~vQL~- 72 (376)
+++.++++|+++|||+|.|+.+ ++..|+++| +++.+.+|..+ ++......+. ..+..+ +.|++.++.
T Consensus 53 ~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G-~~~~vGs~~~~l~~~~~~~s~~~--vr~~ap-~~~~~anlg~ 128 (368)
T 3vkj_A 53 FFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFG-IPMGVGSQRVAIEKAEARESFAI--VRKVAP-TIPIIANLGM 128 (368)
T ss_dssp ETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHT-CCEECCCCHHHHHCGGGSHHHHH--HHHHCS-SSCEEEEEEG
T ss_pred ECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhC-CCeeeecchhccCCHHHHhhHHH--HHHhCc-CcceecCcCe
Confidence 4678999999999999999877 488899997 88998998655 3222222111 112333 446665544
Q ss_pred ----C-CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHH-HHHHHHHHHhcccCccEEEEecCCCC
Q 017176 73 ----G-SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPK-FVGEAMSVIAANTNVPVSVKCRIGVD 146 (376)
Q Consensus 73 ----g-~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~-~~~eiv~~v~~~~~~pv~vKiR~g~~ 146 (376)
+ .+++.+.++++.+ ++|+..|+||. ...+.... |. .+.+ ...+.++++++.+++||.||. .|+.
T Consensus 129 ~ql~~~~~~~~~~~av~~~-~a~al~Ihln~---~~~~~~p~--g~---~~~~~~~~~~i~~i~~~~~vPVivK~-vG~g 198 (368)
T 3vkj_A 129 PQLVKGYGLKEFQDAIQMI-EADAIAVHLNP---AQEVFQPE--GE---PEYQIYALEKLRDISKELSVPIIVKE-SGNG 198 (368)
T ss_dssp GGGGTTCCHHHHHHHHHHT-TCSEEEEECCH---HHHHHSSS--CC---CBCBTHHHHHHHHHHTTCSSCEEEEC-SSSC
T ss_pred eecCCCCCHHHHHHHHHHh-cCCCeEEEecc---hhhhhCCC--CC---chhhHHHHHHHHHHHHHcCCCEEEEe-CCCC
Confidence 4 6788888888777 55555666663 22222111 21 1111 367889999999999999997 5544
Q ss_pred CCccHHHHHHHHHHHhhcCCccEEEE--ccCcccc-----C-----------CCCCCCCCCCCcccHHHHHHHHhhCCCC
Q 017176 147 DHDSYNQLCDFIYKVSSLSPTRHFII--HSRKALL-----N-----------GISPAENRTIPPLKYEYYYALLRDFPDL 208 (376)
Q Consensus 147 ~~~~~~~~~~~i~~~~e~~Gvd~I~v--h~r~~~~-----~-----------g~~~~~~~~~~~~~~~~v~~~~~~~~~i 208 (376)
. +.++ ++.++++|+|+|+| ||+|... + +..-.+| .++ ....+.++.+..+++
T Consensus 199 ~--s~~~-----A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~-g~p--t~~~l~~v~~~~~~i 268 (368)
T 3vkj_A 199 I--SMET-----AKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDW-GVP--TAASIMEVRYSVPDS 268 (368)
T ss_dssp C--CHHH-----HHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTC-SCB--HHHHHHHHHHHSTTC
T ss_pred C--CHHH-----HHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccc-ccc--HHHHHHHHHHHcCCC
Confidence 3 2222 33456899999999 4553100 0 0000111 111 235566776666579
Q ss_pred eEEEecCCCCHHHHHHHHHcCcCeeEEchHHh
Q 017176 209 TFTLNGGINTVDEVNAALRKGAHHVMVGRAAY 240 (376)
Q Consensus 209 pVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l 240 (376)
|||++|||.++.|+.+++..|||+||+||+++
T Consensus 269 pvia~GGI~~~~d~~kal~lGA~~v~ig~~~l 300 (368)
T 3vkj_A 269 FLVGSGGIRSGLDAAKAIALGADIAGMALPVL 300 (368)
T ss_dssp EEEEESSCCSHHHHHHHHHHTCSEEEECHHHH
T ss_pred cEEEECCCCCHHHHHHHHHcCCCEEEEcHHHH
Confidence 99999999999999999999999999999665
No 43
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.79 E-value=3.8e-18 Score=167.25 Aligned_cols=200 Identities=13% Similarity=0.098 Sum_probs=144.1
Q ss_pred CCcEEEccCCC-CChHHHHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCCCCEEEEecCCCHH---------
Q 017176 8 PPWFSVAPMMD-WTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLD--------- 77 (376)
Q Consensus 8 ~nri~lAPM~~-~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~~~--------- 77 (376)
+.||++|||++ +|+..++..+.++||.|++.+++++++.+......+.+. .+.|+++||+...+.
T Consensus 10 ~~Pii~apMaggvs~~~la~av~~aGglG~i~~~~~s~~~l~~~i~~~~~~-----~~~p~gVnl~~~~~~~~~~~~~~~ 84 (369)
T 3bw2_A 10 PLPIVQAPMAGGVSVPQLAAAVCEAGGLGFLAAGYKTADGMYQEIKRLRGL-----TGRPFGVNVFMPQPELAESGAVEV 84 (369)
T ss_dssp SSSEEECCCTTTTSCHHHHHHHHHTTSBEEEECTTSCHHHHHHHHHHHHHH-----CCSCEEEEEECCCCCC---CHHHH
T ss_pred cCCEEeCCCCCCCCcHHHHHHHHHCCCEEEcCCCCCCHHHHHHHHHHHHHh-----CCCCeEEEEecCCCCcccHHHHHH
Confidence 78999999995 999999999999999999999998887664443333333 246899999875431
Q ss_pred -------------------------HHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcc
Q 017176 78 -------------------------NLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN 132 (376)
Q Consensus 78 -------------------------~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~ 132 (376)
.+.+.++.+.+.|+|.|.+|+|||.. ++++.+++
T Consensus 85 ~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~~~--------------------~~i~~~~~- 143 (369)
T 3bw2_A 85 YAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVPDR--------------------EVIARLRR- 143 (369)
T ss_dssp HHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCCCH--------------------HHHHHHHH-
T ss_pred HHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCCcH--------------------HHHHHHHH-
Confidence 14566777888999999999998842 23444444
Q ss_pred cCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCcc-ccCCCCCCCCC--CCCcccHHHHHHHHhhCCCCe
Q 017176 133 TNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA-LLNGISPAENR--TIPPLKYEYYYALLRDFPDLT 209 (376)
Q Consensus 133 ~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~-~~~g~~~~~~~--~~~~~~~~~v~~~~~~~~~ip 209 (376)
.++++.+++. +.++. +.+++.|+|+|.+++... .+.|....... ..+...++.+.++++.. ++|
T Consensus 144 ~g~~v~~~v~-------t~~~a-----~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~-~iP 210 (369)
T 3bw2_A 144 AGTLTLVTAT-------TPEEA-----RAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV-DIP 210 (369)
T ss_dssp TTCEEEEEES-------SHHHH-----HHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC-SSC
T ss_pred CCCeEEEECC-------CHHHH-----HHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhc-Cce
Confidence 3678877652 23332 234579999999987642 11121100000 00012378888887765 899
Q ss_pred EEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchh
Q 017176 210 FTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYT 246 (376)
Q Consensus 210 Vi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf 246 (376)
||++|||.|++++.++++.|||+|++||+++.+|++.
T Consensus 211 ViaaGGI~~~~~~~~~l~~GAd~V~vGs~~~~~~e~~ 247 (369)
T 3bw2_A 211 VVAAGGIMRGGQIAAVLAAGADAAQLGTAFLATDESG 247 (369)
T ss_dssp EEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSTTCC
T ss_pred EEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCcccC
Confidence 9999999999999999999999999999999999874
No 44
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.78 E-value=3.8e-18 Score=164.50 Aligned_cols=193 Identities=10% Similarity=0.035 Sum_probs=142.6
Q ss_pred CeecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCCCCEEEEecCCCHHHHHHHH
Q 017176 4 RQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAKAT 83 (376)
Q Consensus 4 ~~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~~~~~~~aa 83 (376)
.+.+++||++|||+++|+..++..+.+.||.|++.+++++.+.+......+.+. .+.|+++|++..+++ +.+.+
T Consensus 22 ~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~-----~~~p~gVnl~~~~~~-~~~~~ 95 (326)
T 3bo9_A 22 LLEIEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQK-----TDKPFGVNIILVSPW-ADDLV 95 (326)
T ss_dssp HHTCSSSEEECCCTTTSCHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTT-----CSSCEEEEEETTSTT-HHHHH
T ss_pred hcCCCCCEEECCCCCCCCHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHh-----cCCCEEEEEeccCCC-HHHHH
Confidence 356789999999999999999999999999999988777655432221122211 357999999986553 45667
Q ss_pred HHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhh
Q 017176 84 ELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSS 163 (376)
Q Consensus 84 ~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e 163 (376)
+.+.+.|+|.|.+|+|||.. +++.+++ .++++.+++. +.++. +.++
T Consensus 96 ~~~~~~g~d~V~l~~g~p~~---------------------~~~~l~~-~g~~v~~~v~-------s~~~a-----~~a~ 141 (326)
T 3bo9_A 96 KVCIEEKVPVVTFGAGNPTK---------------------YIRELKE-NGTKVIPVVA-------SDSLA-----RMVE 141 (326)
T ss_dssp HHHHHTTCSEEEEESSCCHH---------------------HHHHHHH-TTCEEEEEES-------SHHHH-----HHHH
T ss_pred HHHHHCCCCEEEECCCCcHH---------------------HHHHHHH-cCCcEEEEcC-------CHHHH-----HHHH
Confidence 77788999999999988731 2333333 3678877652 22222 2245
Q ss_pred cCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCC
Q 017176 164 LSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 243 (376)
Q Consensus 164 ~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P 243 (376)
+.|+|+|.++++.. .|..+ ....++.+.++++.. ++|||++|||.|++++.++++.|||+|++||+++..+
T Consensus 142 ~~GaD~i~v~g~~~--GG~~G------~~~~~~ll~~i~~~~-~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~~~ 212 (326)
T 3bo9_A 142 RAGADAVIAEGMES--GGHIG------EVTTFVLVNKVSRSV-NIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVASV 212 (326)
T ss_dssp HTTCSCEEEECTTS--SEECC------SSCHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTBS
T ss_pred HcCCCEEEEECCCC--CccCC------CccHHHHHHHHHHHc-CCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHcCc
Confidence 78999999998653 23222 112478888888765 8999999999999999999999999999999999988
Q ss_pred ch
Q 017176 244 WY 245 (376)
Q Consensus 244 ~l 245 (376)
..
T Consensus 213 e~ 214 (326)
T 3bo9_A 213 ES 214 (326)
T ss_dssp SC
T ss_pred cc
Confidence 75
No 45
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.77 E-value=8.5e-18 Score=162.18 Aligned_cols=194 Identities=12% Similarity=0.013 Sum_probs=140.5
Q ss_pred eecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEeccee-ecccccccchhhhhhccCCCCCCEEEEecCCC---HHHHH
Q 017176 5 QYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLA-AETIIYQQGNLDRFLAFSPEQHPIVLQIGGSN---LDNLA 80 (376)
Q Consensus 5 ~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~-~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~---~~~~~ 80 (376)
+.++.||++|||+++|+..++..+.+.||.|++.+++.+ .+.+....+.+.+. .+.|+.+|++.+. ...+.
T Consensus 12 l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~-----~~~p~~v~l~v~~~~~~~~~~ 86 (328)
T 2gjl_A 12 FGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCREL-----TDRPFGVNLTLLPTQKPVPYA 86 (328)
T ss_dssp HTCSSSEEECCCTTTCSHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHH-----CSSCCEEEEEECCCSSCCCHH
T ss_pred hCCCCCEEECCCCCCCcHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHh-----cCCCeEEEEeccccccCccHH
Confidence 357889999999999999999999999999999877654 33222111111111 2578999999861 23366
Q ss_pred HHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHH
Q 017176 81 KATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYK 160 (376)
Q Consensus 81 ~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~ 160 (376)
+.++.+.+.|+|.|.+|+|||. ++++.+++. ++++.+++. +.++. +
T Consensus 87 ~~~~~~~~~g~d~V~~~~g~p~---------------------~~~~~l~~~-gi~vi~~v~-------t~~~a-----~ 132 (328)
T 2gjl_A 87 EYRAAIIEAGIRVVETAGNDPG---------------------EHIAEFRRH-GVKVIHKCT-------AVRHA-----L 132 (328)
T ss_dssp HHHHHHHHTTCCEEEEEESCCH---------------------HHHHHHHHT-TCEEEEEES-------SHHHH-----H
T ss_pred HHHHHHHhcCCCEEEEcCCCcH---------------------HHHHHHHHc-CCCEEeeCC-------CHHHH-----H
Confidence 7778888899999999988761 234455544 678876642 22222 2
Q ss_pred HhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHh
Q 017176 161 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAY 240 (376)
Q Consensus 161 ~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l 240 (376)
.+++.|+|+|.+++.+. .|+.+.. ....++.+.++++.. ++|||++|||.+++++.++++.|||+|++||+++
T Consensus 133 ~~~~~GaD~i~v~g~~~--GG~~G~~----~~~~~~~l~~v~~~~-~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~~~ 205 (328)
T 2gjl_A 133 KAERLGVDAVSIDGFEC--AGHPGED----DIPGLVLLPAAANRL-RVPIIASGGFADGRGLVAALALGADAINMGTRFL 205 (328)
T ss_dssp HHHHTTCSEEEEECTTC--SBCCCSS----CCCHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred HHHHcCCCEEEEECCCC--CcCCCCc----cccHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 24579999999998653 2222111 123578888887654 8999999999999999999999999999999999
Q ss_pred hCCc
Q 017176 241 QNPW 244 (376)
Q Consensus 241 ~~P~ 244 (376)
.+|.
T Consensus 206 ~~~e 209 (328)
T 2gjl_A 206 ATRE 209 (328)
T ss_dssp TSSS
T ss_pred cCcc
Confidence 9988
No 46
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.77 E-value=7.9e-18 Score=162.92 Aligned_cols=199 Identities=13% Similarity=0.074 Sum_probs=141.9
Q ss_pred CCCeecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecccccccchhhhhhc-cCCCCCCEEEEecCCCHHHHH
Q 017176 2 VARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLA-FSPEQHPIVLQIGGSNLDNLA 80 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~-~~~~~~p~~vQL~g~~~~~~~ 80 (376)
+.++.+++||++|||+++|+.+++..+.+.||.+++.+++... ...+++ ..+.+.|+.+|+ |.+++.+.
T Consensus 40 i~g~~l~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~~~~---------~~~~i~~~~~~g~~v~v~~-g~~~~~~~ 109 (336)
T 1ypf_A 40 LGKHKFKLPVVPANMQTIIDERIATYLAENNYFYIMHRFQPEK---------RISFIRDMQSRGLIASISV-GVKEDEYE 109 (336)
T ss_dssp ETTEEESSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSGGG---------HHHHHHHHHHTTCCCEEEE-CCSHHHHH
T ss_pred ECCEEecCcEEECCCCCCChHHHHHHHHhCCCEEEecCCCCHH---------HHHHHHHHHhcCCeEEEeC-CCCHHHHH
Confidence 3568899999999999999999987666777899888765421 122221 122355889995 77777664
Q ss_pred HHHHHHHHCC--CCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHH
Q 017176 81 KATELANAYN--YDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFI 158 (376)
Q Consensus 81 ~aa~~~~~~G--~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i 158 (376)
.++.+.++| ++.|++|++. | ++....++++++++.++.|+.+|-. .. +.++
T Consensus 110 -~a~~~~~~g~~~~~i~i~~~~-----------G-----~~~~~~~~i~~lr~~~~~~~vi~G~--v~---s~e~----- 162 (336)
T 1ypf_A 110 -FVQQLAAEHLTPEYITIDIAH-----------G-----HSNAVINMIQHIKKHLPESFVIAGN--VG---TPEA----- 162 (336)
T ss_dssp -HHHHHHHTTCCCSEEEEECSS-----------C-----CSHHHHHHHHHHHHHCTTSEEEEEE--EC---SHHH-----
T ss_pred -HHHHHHhcCCCCCEEEEECCC-----------C-----CcHHHHHHHHHHHHhCCCCEEEECC--cC---CHHH-----
Confidence 466677888 9999998731 2 5678889999999988544444421 22 2222
Q ss_pred HHHhhcCCccEEEE--ccCcccc----CCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCe
Q 017176 159 YKVSSLSPTRHFII--HSRKALL----NGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHH 232 (376)
Q Consensus 159 ~~~~e~~Gvd~I~v--h~r~~~~----~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~ 232 (376)
++.++++|+|+|++ |+++... .+.+ .+...++.+.++++.. ++|||++|||.+++|+.+++..|||+
T Consensus 163 A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g------~~g~~~~~l~~v~~~~-~ipVIa~GGI~~g~Dv~kalalGAda 235 (336)
T 1ypf_A 163 VRELENAGADATKVGIGPGKVCITKIKTGFG------TGGWQLAALRWCAKAA-SKPIIADGGIRTNGDVAKSIRFGATM 235 (336)
T ss_dssp HHHHHHHTCSEEEECSSCSTTCHHHHHHSCS------STTCHHHHHHHHHHTC-SSCEEEESCCCSTHHHHHHHHTTCSE
T ss_pred HHHHHHcCCCEEEEecCCCceeecccccCcC------CchhHHHHHHHHHHHc-CCcEEEeCCCCCHHHHHHHHHcCCCE
Confidence 23455799999999 6654311 1111 1111367888888765 99999999999999999999999999
Q ss_pred eEEchHHhhCCc
Q 017176 233 VMVGRAAYQNPW 244 (376)
Q Consensus 233 VmiGRa~l~~P~ 244 (376)
||+||+++....
T Consensus 236 V~iGr~~l~t~E 247 (336)
T 1ypf_A 236 VMIGSLFAGHEE 247 (336)
T ss_dssp EEESGGGTTCTT
T ss_pred EEeChhhhcccc
Confidence 999999996544
No 47
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.76 E-value=3.7e-18 Score=164.85 Aligned_cols=252 Identities=13% Similarity=0.169 Sum_probs=165.6
Q ss_pred CeecCCcEEEccCCCC----C--hHHHHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCCCCEEEEecCC-CH
Q 017176 4 RQYLPPWFSVAPMMDW----T--DNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGS-NL 76 (376)
Q Consensus 4 ~~~l~nri~lAPM~~~----t--d~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~-~~ 76 (376)
|.+++-|+++||++.. . +....+.|.++| .-++.+-+.+ ...+...... .+.|..+||+-. |.
T Consensus 65 G~~~~~P~~iaP~g~~~l~~~~ge~~~araa~~~g-i~~~lSt~ss--------~s~e~v~~~~-~~~~~wfQlY~~~d~ 134 (352)
T 3sgz_A 65 GQEISAPICISPTAFHSIAWPDGEKSTARAAQEAN-ICYVISSYAS--------YSLEDIVAAA-PEGFRWFQLYMKSDW 134 (352)
T ss_dssp TEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHT-CEEEECTTCS--------SCHHHHHHHS-TTCEEEEECCCCSCH
T ss_pred CcccCCcceechHHHHHhcCccHHHHHHHHHHHcC-CCeEeCCCCC--------CCHHHHHHhc-cCccceeccccCCCH
Confidence 5678889999999763 2 344455566665 4333322211 1123332222 346889999854 66
Q ss_pred HHHHHHHHHHHHCCCCEEEecCCCCCcccc----CCC----------Cc--------ccc---ccCCHHHHHHHHHHHhc
Q 017176 77 DNLAKATELANAYNYDEINLNCGCPSPKVA----GHG----------CF--------GVS---LMLDPKFVGEAMSVIAA 131 (376)
Q Consensus 77 ~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~----r~g----------~y--------G~~---l~~~~~~~~eiv~~v~~ 131 (376)
+...+..++++++||..|-+....|..-.. |.+ .+ ++. -.-++.+..+.++.+++
T Consensus 135 ~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~w~~i~~lr~ 214 (352)
T 3sgz_A 135 DFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWNDLSLLQS 214 (352)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC---------------CCCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccccchhhhhccCCCCCHHHHHHHHH
Confidence 777778899999999999999888763110 000 00 011 12356777889999999
Q ss_pred ccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEcc--CccccCCCCCCCCCCCCcccHHHHHHHHhhCC-CC
Q 017176 132 NTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHS--RKALLNGISPAENRTIPPLKYEYYYALLRDFP-DL 208 (376)
Q Consensus 132 ~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~--r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~-~i 208 (376)
.+++||.+|.... .++ ++.++++|+|+|+|++ +++... .+..++.+.++++.+. ++
T Consensus 215 ~~~~PvivK~v~~------~e~-----A~~a~~~GaD~I~vsn~GG~~~d~----------~~~~~~~L~~i~~av~~~i 273 (352)
T 3sgz_A 215 ITRLPIILKGILT------KED-----AELAMKHNVQGIVVSNHGGRQLDE----------VSASIDALREVVAAVKGKI 273 (352)
T ss_dssp HCCSCEEEEEECS------HHH-----HHHHHHTTCSEEEECCGGGTSSCS----------SCCHHHHHHHHHHHHTTSS
T ss_pred hcCCCEEEEecCc------HHH-----HHHHHHcCCCEEEEeCCCCCccCC----------CccHHHHHHHHHHHhCCCC
Confidence 9999999997642 222 2345689999999954 433211 1234778888776542 79
Q ss_pred eEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhCCCCCcccHHHHHHHHHHHHHHHHHhcCCCchH
Q 017176 209 TFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAPSSGLTRRQVVEKYQIYGDAILGTYGNNRPH 288 (376)
Q Consensus 209 pVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (376)
|||++|||.+++|+.+++..|||+|||||+++..+.. .|. ....++++.+.+..+..+...|.. .
T Consensus 274 pVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~~l~~---------~G~----~gv~~~l~~l~~el~~~m~~~G~~--~ 338 (352)
T 3sgz_A 274 EVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLAC---------KGE----DGVKEVLDILTAELHRCMTLSGCQ--S 338 (352)
T ss_dssp EEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHHHHH---------HHH----HHHHHHHHHHHHHHHHHHHHHTCS--B
T ss_pred eEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHh---------cCc----HHHHHHHHHHHHHHHHHHHHhCCC--c
Confidence 9999999999999999999999999999987644331 121 122344555555555666677752 4
Q ss_pred HHHHHHHHHHhhc
Q 017176 289 VRDVMKPLLHFFH 301 (376)
Q Consensus 289 ~~~~~k~~~~y~~ 301 (376)
+..+++++.||.+
T Consensus 339 i~el~~~~~~y~k 351 (352)
T 3sgz_A 339 VAEISPDLIQFSR 351 (352)
T ss_dssp GGGCCGGGBSSCC
T ss_pred HHHHhhhcchhcc
Confidence 6788899999865
No 48
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.75 E-value=7.6e-18 Score=163.91 Aligned_cols=217 Identities=12% Similarity=0.040 Sum_probs=128.4
Q ss_pred CCCeecCCcEEEccCCCCChHH------HHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCCCCEEEEecCCC
Q 017176 2 VARQYLPPWFSVAPMMDWTDNH------YRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSN 75 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td~~------~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~ 75 (376)
+++.+++.|+++|||++.++.+ ++..|++.| .++.+.++...-.- .........+.. .+.+++.+|....
T Consensus 80 i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G-~~~~vGs~~~~le~--~~~~~~~v~r~~-P~~~~ianig~~~ 155 (365)
T 3sr7_A 80 FAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCG-LLFVTGSYSTALKN--PDDTSYQVKKSR-PHLLLATNIGLDK 155 (365)
T ss_dssp ETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHT-CCEEC--------------------------CCEEEEEETTS
T ss_pred ECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcC-CCeecccccccccC--ccccceEehhhC-CCCcEEEEeCCCC
Confidence 4678999999999999987644 888999997 77877777642211 000111112222 3678889997654
Q ss_pred HHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHH
Q 017176 76 LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLC 155 (376)
Q Consensus 76 ~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~ 155 (376)
+. .++.+.++..|+|++.||....+..+... | ..+.+-..+.|+++++.+++||.||. .|+.. +.++
T Consensus 156 ~~--e~~~~~ve~~~adal~ihln~~qe~~~p~---G---d~~~~~~~~~I~~l~~~~~~PVivK~-vg~g~--s~e~-- 222 (365)
T 3sr7_A 156 PY--QAGLQAVRDLQPLFLQVHINLMQELLMPE---G---EREFRSWKKHLSDYAKKLQLPFILKE-VGFGM--DVKT-- 222 (365)
T ss_dssp CH--HHHHHHHHHHCCSCEEEEECHHHHHTSSS---S---CCCCHHHHHHHHHHHHHCCSCEEEEE-CSSCC--CHHH--
T ss_pred CH--HHHHHHHHhcCCCEEEEeccccccccCCC---C---CCcHHHHHHHHHHHHHhhCCCEEEEE-CCCCC--CHHH--
Confidence 32 25566667778999998876433222111 2 13344577899999999999999994 45442 2222
Q ss_pred HHHHHHhhcCCccEEEEccC--cccc-----CC---CCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHH
Q 017176 156 DFIYKVSSLSPTRHFIIHSR--KALL-----NG---ISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAA 225 (376)
Q Consensus 156 ~~i~~~~e~~Gvd~I~vh~r--~~~~-----~g---~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~ 225 (376)
++.+.++|+|+|+|+++ +... +. ....+| .++ ....+.++.....++|||++|||+++.|+.++
T Consensus 223 ---A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~-g~p--t~~~L~~v~~~~~~ipvia~GGI~~g~Dv~Ka 296 (365)
T 3sr7_A 223 ---IQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQW-GQT--TAQVLLNAQPLMDKVEILASGGIRHPLDIIKA 296 (365)
T ss_dssp ---HHHHHHHTCCEEECCCBC--------------CGGGTTC-SCB--HHHHHHHHGGGTTTSEEEECSSCCSHHHHHHH
T ss_pred ---HHHHHHcCCCEEEEeCCCCcccchhhccccccccccccc-ccc--HHHHHHHHHHhcCCCeEEEeCCCCCHHHHHHH
Confidence 23345799999999764 3210 00 000011 111 23455544332247999999999999999999
Q ss_pred HHcCcCeeEEchHHhh
Q 017176 226 LRKGAHHVMVGRAAYQ 241 (376)
Q Consensus 226 l~~Gad~VmiGRa~l~ 241 (376)
+..|||+||+||++|.
T Consensus 297 LalGAdaV~ig~~~l~ 312 (365)
T 3sr7_A 297 LVLGAKAVGLSRTMLE 312 (365)
T ss_dssp HHHTCSEEEESHHHHH
T ss_pred HHcCCCEEEECHHHHH
Confidence 9999999999997654
No 49
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.74 E-value=1.5e-17 Score=164.88 Aligned_cols=205 Identities=12% Similarity=0.091 Sum_probs=137.5
Q ss_pred CeecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecccccccchhhhh-------------------hc-----
Q 017176 4 RQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRF-------------------LA----- 59 (376)
Q Consensus 4 ~~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~-------------------~~----- 59 (376)
++.+++||++|||+++++.+++..+.+.||.|++. .+.+.+.+........++ +.
T Consensus 38 g~~l~~Pii~Apm~~~~~~ela~a~a~aGglg~i~-~~~s~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~ 116 (404)
T 1eep_A 38 NISLNIPFLSSAMDTVTESQMAIAIAKEGGIGIIH-KNMSIEAQRKEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHL 116 (404)
T ss_dssp SCEESSSEEECCCTTTCSHHHHHHHHHHTSEEEEC-SSSCHHHHHHHHHHHHTCC-------------------------
T ss_pred CcccCCCEEeCCCCCCCCHHHHHHHHHCCCEEEEC-CCCCHHHHHHHHHHHHhhccCCCceeccccccccccccccCCCC
Confidence 78899999999999999999999888889888775 344444332211111000 00
Q ss_pred -------------cCC-------CCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCH
Q 017176 60 -------------FSP-------EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDP 119 (376)
Q Consensus 60 -------------~~~-------~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~ 119 (376)
..+ ...++++++... ++ +.+.++.+.++|+|.|+||+++ | ++
T Consensus 117 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~~-~~-~~~~a~~~~~~G~d~i~i~~~~-----------g-----~~ 178 (404)
T 1eep_A 117 EKSDAYKNAEHKEDFPNACKDLNNKLRVGAAVSID-ID-TIERVEELVKAHVDILVIDSAH-----------G-----HS 178 (404)
T ss_dssp -------------CCTTCCBCTTSCBCCEEEECSC-TT-HHHHHHHHHHTTCSEEEECCSC-----------C-----SS
T ss_pred CHHHHHHHHHHhhhcchhhhhcccCceEEEEeCCC-hh-HHHHHHHHHHCCCCEEEEeCCC-----------C-----Ch
Confidence 001 012467777653 22 4555667778999999998643 1 35
Q ss_pred HHHHHHHHHHhccc-CccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccC------ccccCCCCCCCCCCCCc
Q 017176 120 KFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR------KALLNGISPAENRTIPP 192 (376)
Q Consensus 120 ~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r------~~~~~g~~~~~~~~~~~ 192 (376)
+.+.++++++++.+ ++||.++.- .+.++ ++.++++|+|+|.|..+ +....+.+. +
T Consensus 179 ~~~~e~i~~ir~~~~~~pviv~~v------~~~~~-----a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~------p- 240 (404)
T 1eep_A 179 TRIIELIKKIKTKYPNLDLIAGNI------VTKEA-----ALDLISVGADCLKVGIGPGSICTTRIVAGVGV------P- 240 (404)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEE------CSHHH-----HHHHHTTTCSEEEECSSCSTTSHHHHHHCCCC------C-
T ss_pred HHHHHHHHHHHHHCCCCeEEEcCC------CcHHH-----HHHHHhcCCCEEEECCCCCcCcCccccCCCCc------c-
Confidence 78889999999988 789988421 12222 23345799999999211 111111111 1
Q ss_pred ccHHHHHHHHh--hCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchh
Q 017176 193 LKYEYYYALLR--DFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYT 246 (376)
Q Consensus 193 ~~~~~v~~~~~--~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf 246 (376)
.++.+..+.+ ...++|||++|||.+++|+.++++.|||+|++||+++.+|+..
T Consensus 241 -~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l~~~e~~ 295 (404)
T 1eep_A 241 -QITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESP 295 (404)
T ss_dssp -HHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTTSS
T ss_pred -hHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHhcCCCCC
Confidence 2444444443 1238999999999999999999999999999999999999874
No 50
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.70 E-value=1.8e-16 Score=154.38 Aligned_cols=198 Identities=14% Similarity=0.105 Sum_probs=135.8
Q ss_pred CCeecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCCCCEEEEecCCCHHHHHHH
Q 017176 3 ARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAKA 82 (376)
Q Consensus 3 ~~~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~~~~~~~a 82 (376)
..+.++.||+.|||.++|+..++..+.+.||.|++.. ..+.+..... ..+.. .....|+++++..+. .+.
T Consensus 40 ~~~~l~~Pii~apM~~vt~~~lA~avA~~GGlgii~~-~~s~e~~~~~---I~~vk--~~~~~pvga~ig~~~----~e~ 109 (361)
T 3khj_A 40 KNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHK-NMDMESQVNE---VLKVK--NSGGLRVGAAIGVNE----IER 109 (361)
T ss_dssp SSCEESSSEEECSSTTTCSHHHHHHHHHTTCEEEECS-SSCHHHHHHH---HHHHH--HTTCCCCEEEECTTC----HHH
T ss_pred cccccCCCEEeecCCCCCcHHHHHHHHHcCCCeEEec-CCCHHHHHHH---HHHHH--hccCceEEEEeCCCH----HHH
Confidence 3578889999999999999999987777788887753 2222211111 11111 124578999997655 556
Q ss_pred HHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHh
Q 017176 83 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVS 162 (376)
Q Consensus 83 a~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~ 162 (376)
++.+.++|+|.|.||.+. | +++.+.+.++.+++..++||.++.- .+.++. +.+
T Consensus 110 a~~l~eaGad~I~ld~a~-----------G-----~~~~~~~~i~~i~~~~~~~Vivg~v------~t~e~A-----~~l 162 (361)
T 3khj_A 110 AKLLVEAGVDVIVLDSAH-----------G-----HSLNIIRTLKEIKSKMNIDVIVGNV------VTEEAT-----KEL 162 (361)
T ss_dssp HHHHHHTTCSEEEECCSC-----------C-----SBHHHHHHHHHHHHHCCCEEEEEEE------CSHHHH-----HHH
T ss_pred HHHHHHcCcCeEEEeCCC-----------C-----CcHHHHHHHHHHHHhcCCcEEEccC------CCHHHH-----HHH
Confidence 677788999999998542 2 3467788899888877889988532 223322 234
Q ss_pred hcCCccEEEEccCc------cccCCCCCCCCCCCCcccHHHHHHH---HhhCCCCeEEEecCCCCHHHHHHHHHcCcCee
Q 017176 163 SLSPTRHFIIHSRK------ALLNGISPAENRTIPPLKYEYYYAL---LRDFPDLTFTLNGGINTVDEVNAALRKGAHHV 233 (376)
Q Consensus 163 e~~Gvd~I~vh~r~------~~~~g~~~~~~~~~~~~~~~~v~~~---~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~V 233 (376)
.++|+|+|.|..+. ....|.. .+ .+..+.++ .+. .++|||++|||.+++|+.++++.|||+|
T Consensus 163 ~~aGaD~I~VG~~~Gs~~~tr~~~g~g------~p--~~~~i~~v~~~~~~-~~iPVIA~GGI~~~~di~kala~GAd~V 233 (361)
T 3khj_A 163 IENGADGIKVGIGPGSICTTRIVAGVG------VP--QITAIEKCSSVASK-FGIPIIADGGIRYSGDIGKALAVGASSV 233 (361)
T ss_dssp HHTTCSEEEECSSCCTTCCHHHHTCBC------CC--HHHHHHHHHHHHHH-HTCCEEEESCCCSHHHHHHHHHHTCSEE
T ss_pred HHcCcCEEEEecCCCcCCCcccccCCC------CC--cHHHHHHHHHHHhh-cCCeEEEECCCCCHHHHHHHHHcCCCEE
Confidence 57999999994221 1111110 11 24445444 333 3799999999999999999999999999
Q ss_pred EEchHHhhCCchh
Q 017176 234 MVGRAAYQNPWYT 246 (376)
Q Consensus 234 miGRa~l~~P~lf 246 (376)
|+|++++..+...
T Consensus 234 ~vGs~~~~t~Esp 246 (361)
T 3khj_A 234 MIGSILAGTEESP 246 (361)
T ss_dssp EESTTTTTBTTSS
T ss_pred EEChhhhcCCcCC
Confidence 9999999988764
No 51
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.66 E-value=2.7e-16 Score=152.40 Aligned_cols=195 Identities=15% Similarity=0.139 Sum_probs=133.0
Q ss_pred CCCeecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCCCCEEEEecCCCHHHHHH
Q 017176 2 VARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAK 81 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~~~~~~~ 81 (376)
+.++.++.||++|||.++++..++..+.+.||.|++- .+.+.+.+....+ .....+...+ + .++...+
T Consensus 36 l~g~~l~~Pii~ApM~~vte~~lA~A~a~~Gg~gvi~-~~~s~ee~~~~i~---------~~~~~~~~~~-g-~~~~~~e 103 (361)
T 3r2g_A 36 LGKLTLNLPVISANMDTITESNMANFMHSKGAMGALH-RFMTIEENIQEFK---------KCKGPVFVSV-G-CTENELQ 103 (361)
T ss_dssp TSSCEESSCEEECCSTTTCSHHHHHHHHHTTCEEBCC-SCSCHHHHHHHHH---------TCCSCCBEEE-C-SSHHHHH
T ss_pred ECCEEcCCCEEECCCCCchHHHHHHHHHHcCCCEEEe-CCCCHHHHHHHHh---------hcceEEEEEc-C-CCHHHHH
Confidence 4678899999999999999999999999999776553 3333332221111 1112233333 2 3355667
Q ss_pred HHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccHHHHHHHHHH
Q 017176 82 ATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYK 160 (376)
Q Consensus 82 aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~~~~~~i~~ 160 (376)
.++++.++|+|.|.|+..+.. ++.+.++++.+++.. ++||.+|-- .+.++ ++
T Consensus 104 ~~~~a~~aGvdvI~id~a~G~----------------~~~~~e~I~~ir~~~~~~~Vi~G~V------~T~e~-----A~ 156 (361)
T 3r2g_A 104 RAEALRDAGADFFCVDVAHAH----------------AKYVGKTLKSLRQLLGSRCIMAGNV------ATYAG-----AD 156 (361)
T ss_dssp HHHHHHHTTCCEEEEECSCCS----------------SHHHHHHHHHHHHHHTTCEEEEEEE------CSHHH-----HH
T ss_pred HHHHHHHcCCCEEEEeCCCCC----------------cHhHHHHHHHHHHhcCCCeEEEcCc------CCHHH-----HH
Confidence 788899999999999864321 245678899999876 789988721 22333 23
Q ss_pred HhhcCCccEEEE--ccCccc----cCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeE
Q 017176 161 VSSLSPTRHFII--HSRKAL----LNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVM 234 (376)
Q Consensus 161 ~~e~~Gvd~I~v--h~r~~~----~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~Vm 234 (376)
.+.++|+|+|.| |++... ..|. ..+ .+..+.++++.. . |||++|||.++.|+.++++.|||+||
T Consensus 157 ~a~~aGaD~I~Vg~g~G~~~~tr~~~g~------g~p--~l~aI~~~~~~~-~-PVIAdGGI~~~~di~kALa~GAd~V~ 226 (361)
T 3r2g_A 157 YLASCGADIIKAGIGGGSVCSTRIKTGF------GVP--MLTCIQDCSRAD-R-SIVADGGIKTSGDIVKALAFGADFVM 226 (361)
T ss_dssp HHHHTTCSEEEECCSSSSCHHHHHHHCC------CCC--HHHHHHHHTTSS-S-EEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHcCCCEEEEcCCCCcCccccccCCc------cHH--HHHHHHHHHHhC-C-CEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 345799999998 332210 0111 111 356666665543 3 99999999999999999999999999
Q ss_pred EchHHhhCCch
Q 017176 235 VGRAAYQNPWY 245 (376)
Q Consensus 235 iGRa~l~~P~l 245 (376)
+||+++.....
T Consensus 227 iGr~f~~t~Es 237 (361)
T 3r2g_A 227 IGGMLAGSAPT 237 (361)
T ss_dssp ESGGGTTBTTS
T ss_pred EChHHhCCccC
Confidence 99999988654
No 52
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.64 E-value=4.8e-16 Score=142.09 Aligned_cols=183 Identities=11% Similarity=0.088 Sum_probs=122.3
Q ss_pred EEccCCCCChHHHHHHHH---HhCCCcE--EEecceee-cccccccchhhhhhccCCCCCCEEEEecCCCHHHHHHHHHH
Q 017176 12 SVAPMMDWTDNHYRTLAR---LISKHAW--LYTEMLAA-ETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAKATEL 85 (376)
Q Consensus 12 ~lAPM~~~td~~~r~~~~---~~Gg~gl--~~te~v~~-~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~~~~~~~aa~~ 85 (376)
.|.|+ .|+.+||.+|+ ++| ++. ++.+|+.. ...+. . .++... .+.|++.|+.++.+ ..++.
T Consensus 12 ~l~p~--~t~~~i~~l~~~a~~~g-~~~v~v~~~~v~~~~~~l~-~---v~v~~v--~~~P~g~~~~~~k~----~~~~~ 78 (225)
T 1mzh_A 12 ALKPH--LSEKEIEEFVLKSEELG-IYAVCVNPYHVKLASSIAK-K---VKVCCV--IGFPLGLNKTSVKV----KEAVE 78 (225)
T ss_dssp ECCTT--CCHHHHHHHHHHHHHTT-CSEEEECGGGHHHHHHHCS-S---SEEEEE--ESTTTCCSCHHHHH----HHHHH
T ss_pred ccCCC--CCHHHHHHHHHHHHHhC-CeEEEECHHHHHHHHHHhc-C---CceeeE--ecCCCCccchhhhH----HHHHH
Confidence 46786 68999999997 565 666 44566654 22222 1 111111 13456656544433 33467
Q ss_pred HHHCCCCEEE--ecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe---cCCCCCCccHHHHHHHHHH
Q 017176 86 ANAYNYDEIN--LNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC---RIGVDDHDSYNQLCDFIYK 160 (376)
Q Consensus 86 ~~~~G~d~Ie--iN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi---R~g~~~~~~~~~~~~~i~~ 160 (376)
+.+.|+|+|| +|+|| .+.+. .+.+.+.++++++.++ |+++|+ +.++++ + +.. .+++
T Consensus 79 A~~~Gad~Id~viN~g~-----~~~~~--------~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~-~---~~~-~~a~ 139 (225)
T 1mzh_A 79 AVRDGAQELDIVWNLSA-----FKSEK--------YDFVVEELKEIFRETP-SAVHKVIVETPYLNE-E---EIK-KAVE 139 (225)
T ss_dssp HHHTTCSEEEEECCHHH-----HHTTC--------HHHHHHHHHHHHHTCT-TSEEEEECCGGGCCH-H---HHH-HHHH
T ss_pred HHHcCCCEEEEEecHHH-----HhcCC--------hHHHHHHHHHHHHHhc-CceEEEEEeCCCCCH-H---HHH-HHHH
Confidence 7789999999 79988 22333 3567777999999888 999999 766654 2 222 2456
Q ss_pred HhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEEEecCCCCHHHHHHHHHcCcCeeEEchH
Q 017176 161 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 238 (376)
Q Consensus 161 ~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa 238 (376)
+++++|+|+|... +....| + ..++.++.+++.. .++||+++|||+|++|+.+++++|||.|.++++
T Consensus 140 ~a~eaGad~I~ts--tg~~~g--g--------a~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~iG~s~~ 206 (225)
T 1mzh_A 140 ICIEAGADFIKTS--TGFAPR--G--------TTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRIGTSSG 206 (225)
T ss_dssp HHHHHTCSEEECC--CSCSSS--C--------CCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESCH
T ss_pred HHHHhCCCEEEEC--CCCCCC--C--------CCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHHHHccH
Confidence 6778999999433 221111 1 2377777776653 279999999999999999999999998877766
No 53
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.58 E-value=8.6e-15 Score=143.83 Aligned_cols=210 Identities=12% Similarity=0.029 Sum_probs=129.9
Q ss_pred CCeecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecccccccchhhhhh------------------------
Q 017176 3 ARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFL------------------------ 58 (376)
Q Consensus 3 ~~~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~------------------------ 58 (376)
..+.++.||+.|||.++|+..+...+.+.||.|.+-. +.+++.+.....+..++.
T Consensus 37 ~~l~l~~PIi~a~M~~Vs~~~lA~Ava~aGGlGvi~~-~~~~e~~~~~i~~vk~~~~g~~~~P~~~~~nL~~~~~~~~~~ 115 (400)
T 3ffs_A 37 KNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHK-NMDMESQVNEVLKVKNWISNLEKNESTPDQNLDKESTDGKDT 115 (400)
T ss_dssp SSCEESSSEEECSCTTTCSSHHHHHHHTTTCEEEECS-SSCHHHHHHHHHHHHCCC------------------------
T ss_pred cccCCCCCEEeCCCCCcCcHHHHHHHHHCCCEEEeCC-CCCHHHHHHHHHHHHhhccCcccCCCCccccccCCCCCHHHH
Confidence 4577889999999999999999999889999988753 444332211111110000
Q ss_pred ------ccC-----CCCC--CEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHH
Q 017176 59 ------AFS-----PEQH--PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEA 125 (376)
Q Consensus 59 ------~~~-----~~~~--p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~ei 125 (376)
... ++.. .+.+-+...+ .+.++.+.++|+|.|.|+.+. | +++.+.++
T Consensus 116 ~~~~~~~~~p~~~~d~~g~l~v~~~v~~~~----~e~~~~lveaGvdvIvldta~-----------G-----~~~~~~e~ 175 (400)
T 3ffs_A 116 KSNNNIDAYSNENLDNKGRLRVGAAIGVNE----IERAKLLVEAGVDVIVLDSAH-----------G-----HSLNIIRT 175 (400)
T ss_dssp -------CCTTCCBCTTSSBCCEEEECCC-----CHHHHHHHHHTCSEEEECCSC-----------C-----SBHHHHHH
T ss_pred HHHHHhhhCcchhhccccceeEEeecCCCH----HHHHHHHHHcCCCEEEEeCCC-----------C-----CcccHHHH
Confidence 000 0011 1112121111 455667777899999886421 2 34567788
Q ss_pred HHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhh-
Q 017176 126 MSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD- 204 (376)
Q Consensus 126 v~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~- 204 (376)
++.+++..++||.++.- .+.++. +.++++|+|+|.+..... ..+.. ..........+..+.++.+.
T Consensus 176 I~~ik~~~~i~Vi~g~V------~t~e~A-----~~a~~aGAD~I~vG~g~G-s~~~t-r~~~g~g~p~~~al~~v~~~~ 242 (400)
T 3ffs_A 176 LKEIKSKMNIDVIVGNV------VTEEAT-----KELIENGADGIKVGIGPG-SICTT-RIVAGVGVPQITAIEKCSSVA 242 (400)
T ss_dssp HHHHHTTCCCEEEEEEE------CSHHHH-----HHHHHTTCSEEEECC-----------CCSCBCCCHHHHHHHHHHHH
T ss_pred HHHHHhcCCCeEEEeec------CCHHHH-----HHHHHcCCCEEEEeCCCC-cCccc-ccccccchhHHHHHHHHHHHH
Confidence 89998887889887522 223332 334579999999942110 00000 00000111135666666543
Q ss_pred -CCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchh
Q 017176 205 -FPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYT 246 (376)
Q Consensus 205 -~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf 246 (376)
..++|||++|||.+++|+.++++.|||+||+|++++..+.-.
T Consensus 243 ~~~~IPVIA~GGI~~~~di~kalalGAd~V~vGt~f~~t~Es~ 285 (400)
T 3ffs_A 243 SKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEESP 285 (400)
T ss_dssp TTTTCCEEEESCCCSHHHHHHHHTTTCSEEEECGGGTTBTTSS
T ss_pred HhcCCCEEecCCCCCHHHHHHHHHcCCCEEEEChHHhcCCCCC
Confidence 248999999999999999999999999999999999987653
No 54
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.58 E-value=9.3e-15 Score=144.31 Aligned_cols=213 Identities=11% Similarity=0.038 Sum_probs=133.2
Q ss_pred CCCeecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecc---------cccc---------------------c
Q 017176 2 VARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAET---------IIYQ---------------------Q 51 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~---------~~~~---------------------~ 51 (376)
+.++.+++|+++|||+++++..++..+.+.|+.+++.|||..... +... +
T Consensus 61 l~g~~l~~Pii~Apm~g~~~~~~a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d 140 (393)
T 2qr6_A 61 IDAYKFDLPFMNHPSDALASPEFVIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLD 140 (393)
T ss_dssp ETTEEESSSEEECCCTTTCCHHHHHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred EcccccCCCeEeCCCCCcccHHHHHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccCC
Confidence 357889999999999999999999999999999999997632210 0000 0
Q ss_pred c-hhhhhh-ccCCCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHH
Q 017176 52 G-NLDRFL-AFSPEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVI 129 (376)
Q Consensus 52 ~-~~~~~~-~~~~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v 129 (376)
+ ....++ ...+.+.++++.+.+.+.. +.++.+.++|+|.+.+|. .|.. ..|++ ++...+-+..+
T Consensus 141 ~~~~~~~i~~~~~~g~~v~~~v~~~~~~---e~a~~~~~agad~i~i~~-~~~~-----~~~~~-----~~~~~~~i~~l 206 (393)
T 2qr6_A 141 TELLSERIAQVRDSGEIVAVRVSPQNVR---EIAPIVIKAGADLLVIQG-TLIS-----AEHVN-----TGGEALNLKEF 206 (393)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEECTTTHH---HHHHHHHHTTCSEEEEEC-SSCC-----SSCCC-----C-----CHHHH
T ss_pred HHHHHHHHHHHhhcCCeEEEEeCCccHH---HHHHHHHHCCCCEEEEeC-Cccc-----cccCC-----CcccHHHHHHH
Confidence 0 000111 1122366788888765543 344556678999999883 3321 11222 11112224566
Q ss_pred hcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhh-----
Q 017176 130 AANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD----- 204 (376)
Q Consensus 130 ~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~----- 204 (376)
++.+++||.+| |.. +.++. +.+.++|+|.|.| +... ..+.. . ....+..++.+.++.+.
T Consensus 207 ~~~~~~pvi~g---gi~---t~e~a-----~~~~~~Gad~i~v-g~Gg-~~~~~-~--~~~g~~~~~~l~~v~~~~~~~~ 270 (393)
T 2qr6_A 207 IGSLDVPVIAG---GVN---DYTTA-----LHMMRTGAVGIIV-GGGE-NTNSL-A--LGMEVSMATAIADVAAARRDYL 270 (393)
T ss_dssp HHHCSSCEEEE---CCC---SHHHH-----HHHHTTTCSEEEE-SCCS-CCHHH-H--TSCCCCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEC---CcC---CHHHH-----HHHHHcCCCEEEE-CCCc-ccccc-c--CCCCCChHHHHHHHHHHHHHhH
Confidence 66678999996 322 23332 2334799999999 3311 01000 0 00011235666555543
Q ss_pred --CC--CCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCc
Q 017176 205 --FP--DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 205 --~~--~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~ 244 (376)
+. ++|||++|||.+++|+.+++..|||+||+||+++..+.
T Consensus 271 ~~~~~~~ipvia~GGI~~~~dv~kalalGA~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 271 DETGGRYVHIIADGSIENSGDVVKAIACGADAVVLGSPLARAEE 314 (393)
T ss_dssp HHHTSCCCEEEECSSCCSHHHHHHHHHHTCSEEEECGGGGGSTT
T ss_pred hhcCCcceEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCCC
Confidence 32 29999999999999999999999999999999999886
No 55
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.58 E-value=4.7e-15 Score=144.40 Aligned_cols=205 Identities=10% Similarity=-0.001 Sum_probs=128.3
Q ss_pred CeecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCCCCEEEEec-CCCHHHHHHH
Q 017176 4 RQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIG-GSNLDNLAKA 82 (376)
Q Consensus 4 ~~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~-g~~~~~~~~a 82 (376)
.+.++.||+.|||.++|+..+...+.+.||.|++-..+ +.+... ..+..+... .++.+++. +.++ ++.+.
T Consensus 42 ~~~l~~Pii~apM~~vs~~~lA~avA~aGGlg~i~~~~-s~e~~~------~~i~~vk~~-~~l~vga~vg~~~-~~~~~ 112 (366)
T 4fo4_A 42 NIALNIPMVSASMDTVTEARLAIALAQEGGIGFIHKNM-SIEQQA------AQVHQVKIS-GGLRVGAAVGAAP-GNEER 112 (366)
T ss_dssp TEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECSSS-CHHHHH------HHHHHHHTT-TSCCCEEECCSCT-TCHHH
T ss_pred ccccCCCEEeCCCCCCChHHHHHHHHHcCCceEeecCC-CHHHHH------HHHHHHHhc-CceeEEEEeccCh-hHHHH
Confidence 56788999999999999999998888889887764321 222111 111111111 23333332 2222 34566
Q ss_pred HHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccHHHHHHHHHHH
Q 017176 83 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKV 161 (376)
Q Consensus 83 a~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~~~~~~i~~~ 161 (376)
++.+.++|+|.|.||... | +++.+.+.++.+++.. ++||.+..- .+.++. +.
T Consensus 113 ~~~lieaGvd~I~idta~-----------G-----~~~~~~~~I~~ik~~~p~v~Vi~G~v------~t~e~A-----~~ 165 (366)
T 4fo4_A 113 VKALVEAGVDVLLIDSSH-----------G-----HSEGVLQRIRETRAAYPHLEIIGGNV------ATAEGA-----RA 165 (366)
T ss_dssp HHHHHHTTCSEEEEECSC-----------T-----TSHHHHHHHHHHHHHCTTCEEEEEEE------CSHHHH-----HH
T ss_pred HHHHHhCCCCEEEEeCCC-----------C-----CCHHHHHHHHHHHHhcCCCceEeeee------CCHHHH-----HH
Confidence 777888999999998421 2 3456778888888876 778776421 223332 23
Q ss_pred hhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhh--CCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHH
Q 017176 162 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD--FPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAA 239 (376)
Q Consensus 162 ~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~--~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~ 239 (376)
++++|+|+|.+..+.....+.... .......+..+.++.+. ..++|||+.|||.++.|+.++++.|||+||+|+.+
T Consensus 166 a~~aGAD~I~vG~gpGs~~~tr~~--~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f 243 (366)
T 4fo4_A 166 LIEAGVSAVKVGIGPGSICTTRIV--TGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMF 243 (366)
T ss_dssp HHHHTCSEEEECSSCSTTBCHHHH--HCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTT
T ss_pred HHHcCCCEEEEecCCCCCCCcccc--cCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHh
Confidence 457899999992110000000000 00011125555555431 24899999999999999999999999999999999
Q ss_pred hhCCchh
Q 017176 240 YQNPWYT 246 (376)
Q Consensus 240 l~~P~lf 246 (376)
+..+.-.
T Consensus 244 ~~t~Esp 250 (366)
T 4fo4_A 244 AGTEEAP 250 (366)
T ss_dssp TTBTTSS
T ss_pred hcCCCCC
Confidence 9887753
No 56
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=99.50 E-value=8.2e-14 Score=131.73 Aligned_cols=154 Identities=19% Similarity=0.273 Sum_probs=106.2
Q ss_pred HHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCC------------
Q 017176 80 AKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDD------------ 147 (376)
Q Consensus 80 ~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~------------ 147 (376)
.+.|+.++++|+++|.... |+++..+..+ |+++|++|+.+.+|.+ ++++||+.|+|+||.+
T Consensus 27 ~e~A~~ae~aGA~aI~~l~--~v~~d~~~~~-G~arm~~p~~i~~I~~----av~iPV~~K~rig~~~e~qilea~GaD~ 99 (330)
T 2yzr_A 27 VEQAQIAEEAGAVAVMALE--RVPADIRAAG-GVARMSDPALIEEIMD----AVSIPVMAKCRIGHTTEALVLEAIGVDM 99 (330)
T ss_dssp HHHHHHHHHHTCSEEEECS--SCHHHHC--C-CCCCCCCHHHHHHHHH----HCSSCEEEEEETTCHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHcCCCEEEecC--CccccccCCc-chhhcCCHHHHHHHHH----hcCCCeEEEEeecchHHHHHHHHcCCCE
Confidence 5578888899999995543 8888888877 9999999999888865 4679999999999831
Q ss_pred -----------C-----------------ccHHHHHHHHHHHhhcCCccEEEEcc--------------Cc---------
Q 017176 148 -----------H-----------------DSYNQLCDFIYKVSSLSPTRHFIIHS--------------RK--------- 176 (376)
Q Consensus 148 -----------~-----------------~~~~~~~~~i~~~~e~~Gvd~I~vh~--------------r~--------- 176 (376)
. .++.|.++ ++ +.|+++|.+|| |+
T Consensus 100 Id~s~~l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r---~~--~~Ga~~i~t~ge~g~~~~ve~v~H~r~~~~~~~~~s 174 (330)
T 2yzr_A 100 IDESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVR---RI--WEGAAMIRTKGEAGTGNIVEAVRHMRLMNEAIAQLQ 174 (330)
T ss_dssp EEEETTSCCSCSSCCCCGGGCSSCEEEECSSHHHHHH---HH--HHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHT
T ss_pred EehhccCCHHHHHHHhhhhhcccchhhccccHHHHHH---HH--hcCcceeeccCCCCcccchhHHHHHHHHHHHHHHhc
Confidence 0 02444332 22 57999999998 33
Q ss_pred ---c--ccCC--CCCCCC---------------CCC--C------------cccHHHHHHHHhhCCCCeE--EEecCCCC
Q 017176 177 ---A--LLNG--ISPAEN---------------RTI--P------------PLKYEYYYALLRDFPDLTF--TLNGGINT 218 (376)
Q Consensus 177 ---~--~~~g--~~~~~~---------------~~~--~------------~~~~~~v~~~~~~~~~ipV--i~nGgI~s 218 (376)
. .+.. ..++++ +.+ . ...++.+.++.+.. ++|| |++|||.|
T Consensus 175 ~~~~~El~~~A~~~gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~~-~IPVV~VAeGGI~T 253 (330)
T 2yzr_A 175 RMTDEEVYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLG-RLPVVNFAAGGVAT 253 (330)
T ss_dssp TSCHHHHHHHHHHHHGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHHT-SCSSEEEECSCCCS
T ss_pred cCCHHHHHHHHHHcCCCEeecccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHhC-CCCeEEEEECCCCC
Confidence 0 0000 000110 000 0 11126677776654 7998 69999999
Q ss_pred HHHHHHHHHcCcCeeEEchHHh--hCCchh
Q 017176 219 VDEVNAALRKGAHHVMVGRAAY--QNPWYT 246 (376)
Q Consensus 219 ~~da~~~l~~Gad~VmiGRa~l--~~P~lf 246 (376)
++++.++++.|||+|+|||+++ .||...
T Consensus 254 peda~~~l~~GaDgV~VGsaI~~a~dP~~a 283 (330)
T 2yzr_A 254 PADAALMMQLGSDGVFVGSGIFKSENPLER 283 (330)
T ss_dssp HHHHHHHHHTTCSCEEESHHHHTSSCHHHH
T ss_pred HHHHHHHHHcCcCEEeeHHHHhcCCCHHHH
Confidence 9999999999999999999999 455443
No 57
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.50 E-value=2.4e-13 Score=131.98 Aligned_cols=203 Identities=11% Similarity=0.037 Sum_probs=128.4
Q ss_pred CCeecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCC-CCEEEEecCCCHHHHHH
Q 017176 3 ARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQ-HPIVLQIGGSNLDNLAK 81 (376)
Q Consensus 3 ~~~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~-~p~~vQL~g~~~~~~~~ 81 (376)
.++.++.||++|||++.++..+...+.+.||.|++...+ +.+..... ... .+.. .++.+.+ |..++.+.+
T Consensus 52 ~~~~l~~PIi~ApM~~~~~~~lA~Ava~~Gglg~i~~~~-s~e~~~~~---i~~----~p~~l~~v~~~~-g~~~~~~~~ 122 (351)
T 2c6q_A 52 KQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHY-SLVQWQEF---AGQ----NPDCLEHLAASS-GTGSSDFEQ 122 (351)
T ss_dssp CCEEEECCEEECSSTTTSCHHHHHHHHHTTCEEECCTTC-CHHHHHHH---HHH----CGGGCTTEEEEE-CSSHHHHHH
T ss_pred cCccccCCEEECCCCCCCcHHHHHHHHHCCCEEEEcCCC-CHHHHHHH---Hhh----CchhhheeEeec-CCChHHHHH
Confidence 378899999999999999999998888888777664322 22211110 000 1110 2466665 556666665
Q ss_pred HHHHHHH-CCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccHHHHHHHHH
Q 017176 82 ATELANA-YNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIY 159 (376)
Q Consensus 82 aa~~~~~-~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~~~~~~i~ 159 (376)
+...++. .|+|.|+++... | ++..+.+.++++++.+ ++||.+|.-. +.++ +
T Consensus 123 ~~~l~~~~~g~~~i~i~~~~-----------g-----~~~~~~~~i~~lr~~~~~~~vi~g~v~------t~e~-----A 175 (351)
T 2c6q_A 123 LEQILEAIPQVKYICLDVAN-----------G-----YSEHFVEFVKDVRKRFPQHTIMAGNVV------TGEM-----V 175 (351)
T ss_dssp HHHHHHHCTTCCEEEEECSC-----------T-----TBHHHHHHHHHHHHHCTTSEEEEEEEC------SHHH-----H
T ss_pred HHHHHhccCCCCEEEEEecC-----------C-----CcHHHHHHHHHHHHhcCCCeEEEEeCC------CHHH-----H
Confidence 5554443 389999887421 2 3456778899999888 7899887422 2333 2
Q ss_pred HHhhcCCccEEEEccCcc-ccCCCCCCCCCCCCcccHHHHHHH---HhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEE
Q 017176 160 KVSSLSPTRHFIIHSRKA-LLNGISPAENRTIPPLKYEYYYAL---LRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 235 (376)
Q Consensus 160 ~~~e~~Gvd~I~vh~r~~-~~~g~~~~~~~~~~~~~~~~v~~~---~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~Vmi 235 (376)
+.+.++|+|.|.|..+.. ...+.. .+....+. ...+.++ .+. .++|||+.|||.++.|+.+++..|||+|++
T Consensus 176 ~~a~~aGaD~I~v~~g~G~~~~~r~-~~g~~~p~--~~~l~~v~~~~~~-~~ipvIa~GGI~~g~di~kAlalGA~~V~v 251 (351)
T 2c6q_A 176 EELILSGADIIKVGIGPGSVCTTRK-KTGVGYPQ--LSAVMECADAAHG-LKGHIISDGGCSCPGDVAKAFGAGADFVML 251 (351)
T ss_dssp HHHHHTTCSEEEECSSCSTTBCHHH-HHCBCCCH--HHHHHHHHHHHHH-TTCEEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHhCCCEEEECCCCCcCcCccc-cCCCCccH--HHHHHHHHHHHhh-cCCcEEEeCCCCCHHHHHHHHHcCCCceec
Confidence 234579999998853211 000000 00001111 3333333 333 379999999999999999999999999999
Q ss_pred chHHhhCCch
Q 017176 236 GRAAYQNPWY 245 (376)
Q Consensus 236 GRa~l~~P~l 245 (376)
||.++..+..
T Consensus 252 G~~fl~~~Es 261 (351)
T 2c6q_A 252 GGMLAGHSES 261 (351)
T ss_dssp STTTTTBTTS
T ss_pred cHHHhcCccC
Confidence 9999976543
No 58
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=99.46 E-value=6e-13 Score=122.39 Aligned_cols=151 Identities=17% Similarity=0.220 Sum_probs=107.2
Q ss_pred HHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHH
Q 017176 80 AKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIY 159 (376)
Q Consensus 80 ~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~ 159 (376)
.+.|+.++++|+..|....+||.+. |..+ |.+-|++|+.+.+ |++.+++||.-|.|+|. +.+ +
T Consensus 21 ~eqa~iae~aGa~av~~l~~~p~d~--r~~g-Gv~Rm~dp~~I~~----I~~aVsIPVm~k~righ-----~~E-----A 83 (291)
T 3o07_A 21 PEQAKIAEKSGACAVMALESIPADM--RKSG-KVCRMSDPKMIKD----IMNSVSIPVMAKVRIGH-----FVE-----A 83 (291)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHH--HTTT-CCCCCCCHHHHHH----HHTTCSSCEEEEEETTC-----HHH-----H
T ss_pred HHHHHHHHHhCchhhhhccCCCchh--hhcC-CccccCCHHHHHH----HHHhCCCCeEEEEecCc-----HHH-----H
Confidence 3578889999999999999999873 3444 7788999987655 46778899999999974 222 4
Q ss_pred HHhhcCCccEEEEccC-cc----------ccC-------------------C-----CCC--------------------
Q 017176 160 KVSSLSPTRHFIIHSR-KA----------LLN-------------------G-----ISP-------------------- 184 (376)
Q Consensus 160 ~~~e~~Gvd~I~vh~r-~~----------~~~-------------------g-----~~~-------------------- 184 (376)
+++++.|+|+|.-+-+ +. .++ | +.+
T Consensus 84 qilea~GaD~IDesevltpad~~~~I~k~~f~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~ 163 (291)
T 3o07_A 84 QIIEALEVDYIDESEVLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEE 163 (291)
T ss_dssp HHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEecccCCCHHHHHHHhhhhcCCCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHH
Confidence 5567788888864422 00 000 0 000
Q ss_pred ------C-CCCC------CCcccHHHHHHHHhhCCCCeE--EEecCCCCHHHHHHHHHcCcCeeEEchHHhhC--Cchhh
Q 017176 185 ------A-ENRT------IPPLKYEYYYALLRDFPDLTF--TLNGGINTVDEVNAALRKGAHHVMVGRAAYQN--PWYTL 247 (376)
Q Consensus 185 ------~-~~~~------~~~~~~~~v~~~~~~~~~ipV--i~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~--P~lf~ 247 (376)
. ..+. -....|+.+.++++. +++|| |+||||.|++|+.+++++|||+||+|||++.. |+.+.
T Consensus 164 i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~-~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~DP~~~A 242 (291)
T 3o07_A 164 IKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEK-GKLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSNPVRLA 242 (291)
T ss_dssp HHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHH-TSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHH
T ss_pred HHHHHcCCCHHHhhhcccccCCCHHHHHHHHHc-cCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCCHHHHH
Confidence 0 0000 002348888888876 58998 57999999999999999999999999999984 55443
Q ss_pred H
Q 017176 248 G 248 (376)
Q Consensus 248 ~ 248 (376)
+
T Consensus 243 k 243 (291)
T 3o07_A 243 T 243 (291)
T ss_dssp H
T ss_pred H
Confidence 3
No 59
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.45 E-value=3.6e-13 Score=136.52 Aligned_cols=131 Identities=11% Similarity=0.034 Sum_probs=91.6
Q ss_pred HHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccHHHHHHH
Q 017176 79 LAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDF 157 (376)
Q Consensus 79 ~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~~~~~~ 157 (376)
..+.++.+.++|+|.|+||..||. .+.+.++++++++.. ++||.++-- .+.++
T Consensus 232 ~~~~a~~l~~aG~d~I~id~a~g~----------------~~~~~~~i~~ir~~~p~~~Vi~g~v------~t~e~---- 285 (496)
T 4fxs_A 232 NEERVKALVEAGVDVLLIDSSHGH----------------SEGVLQRIRETRAAYPHLEIIGGNV------ATAEG---- 285 (496)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTT----------------SHHHHHHHHHHHHHCTTCCEEEEEE------CSHHH----
T ss_pred hHHHHHHHHhccCceEEecccccc----------------chHHHHHHHHHHHHCCCceEEEccc------CcHHH----
Confidence 345566677789999999988762 245678899998887 788888421 12222
Q ss_pred HHHHhhcCCccEEEEccCc------cccCCCCCCCCCCCCcccHHHHHHHHhhC--CCCeEEEecCCCCHHHHHHHHHcC
Q 017176 158 IYKVSSLSPTRHFIIHSRK------ALLNGISPAENRTIPPLKYEYYYALLRDF--PDLTFTLNGGINTVDEVNAALRKG 229 (376)
Q Consensus 158 i~~~~e~~Gvd~I~vh~r~------~~~~g~~~~~~~~~~~~~~~~v~~~~~~~--~~ipVi~nGgI~s~~da~~~l~~G 229 (376)
++.+.++|+|+|.|.++. ....|.+ ...+..+.++++.. .++|||++|||.+++|+.++++.|
T Consensus 286 -a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g--------~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~G 356 (496)
T 4fxs_A 286 -ARALIEAGVSAVKVGIGPGSICTTRIVTGVG--------VPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAG 356 (496)
T ss_dssp -HHHHHHHTCSEEEECSSCCTTBCHHHHHCCC--------CCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTT
T ss_pred -HHHHHHhCCCEEEECCCCCcCcccccccCCC--------ccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcC
Confidence 223457899999985322 1111211 11255555555421 279999999999999999999999
Q ss_pred cCeeEEchHHhhCCc
Q 017176 230 AHHVMVGRAAYQNPW 244 (376)
Q Consensus 230 ad~VmiGRa~l~~P~ 244 (376)
||+||+||+++....
T Consensus 357 Ad~V~iGs~f~~t~E 371 (496)
T 4fxs_A 357 ASCVMVGSMFAGTEE 371 (496)
T ss_dssp CSEEEESTTTTTBTT
T ss_pred CCeEEecHHHhcCCC
Confidence 999999999988654
No 60
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.42 E-value=2.2e-12 Score=118.62 Aligned_cols=150 Identities=14% Similarity=0.205 Sum_probs=110.2
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc----Ccc---
Q 017176 64 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT----NVP--- 136 (376)
Q Consensus 64 ~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~----~~p--- 136 (376)
+.|+.+..+-.++++ ++.+.++|+|.|-+ |+.++.+|+.+.++++.+...+ +.+
T Consensus 74 ~ipv~v~ggi~~~~~----~~~~l~~Gad~V~l---------------g~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~ 134 (244)
T 2y88_A 74 DVQVELSGGIRDDES----LAAALATGCARVNV---------------GTAALENPQWCARVIGEHGDQVAVGLDVQIID 134 (244)
T ss_dssp SSEEEEESSCCSHHH----HHHHHHTTCSEEEE---------------CHHHHHCHHHHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCcEEEECCCCCHHH----HHHHHHcCCCEEEE---------------CchHhhChHHHHHHHHHcCCCEEEEEeccccC
Confidence 668887766677775 44455679998865 5556678899999998875432 222
Q ss_pred --EEEEecCCCCCCc-cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEe
Q 017176 137 --VSVKCRIGVDDHD-SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN 213 (376)
Q Consensus 137 --v~vKiR~g~~~~~-~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~n 213 (376)
.+||+| ||.+.. +..+.+ +.+++.|++.|.+|+++....+. ..+++.+.++++. .++|||++
T Consensus 135 ~~~~v~~~-g~~~~~~~~~e~~----~~~~~~G~~~i~~~~~~~~~~~~---------g~~~~~~~~l~~~-~~ipvia~ 199 (244)
T 2y88_A 135 GEHRLRGR-GWETDGGDLWDVL----ERLDSEGCSRFVVTDITKDGTLG---------GPNLDLLAGVADR-TDAPVIAS 199 (244)
T ss_dssp TEEEEEEG-GGTEEEEEHHHHH----HHHHHTTCCCEEEEETTTTTTTS---------CCCHHHHHHHHTT-CSSCEEEE
T ss_pred CCCEEEEC-CccCCCCCHHHHH----HHHHhCCCCEEEEEecCCccccC---------CCCHHHHHHHHHh-CCCCEEEE
Confidence 368888 886532 333332 23457899999999987532111 1148888888775 48999999
Q ss_pred cCCCCHHHHHHHHHc---CcCeeEEchHHhhCCchhh
Q 017176 214 GGINTVDEVNAALRK---GAHHVMVGRAAYQNPWYTL 247 (376)
Q Consensus 214 GgI~s~~da~~~l~~---Gad~VmiGRa~l~~P~lf~ 247 (376)
|||.+++|+.++++. |||+||+||+++.+||.|.
T Consensus 200 GGI~~~~d~~~~~~~~~~Gad~v~vG~al~~~~~~~~ 236 (244)
T 2y88_A 200 GGVSSLDDLRAIATLTHRGVEGAIVGKALYARRFTLP 236 (244)
T ss_dssp SCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTSSCHH
T ss_pred CCCCCHHHHHHHHhhccCCCCEEEEcHHHHCCCcCHH
Confidence 999999999999985 9999999999999999863
No 61
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.41 E-value=3.7e-13 Score=138.27 Aligned_cols=203 Identities=8% Similarity=-0.002 Sum_probs=128.1
Q ss_pred HHHhCCCcEEEecceeecccccccchhhhhh-ccCCCCCCEEEEecCCCHH--H-------HHHHHHHHHHCCCCEEEec
Q 017176 28 ARLISKHAWLYTEMLAAETIIYQQGNLDRFL-AFSPEQHPIVLQIGGSNLD--N-------LAKATELANAYNYDEINLN 97 (376)
Q Consensus 28 ~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~-~~~~~~~p~~vQL~g~~~~--~-------~~~aa~~~~~~G~d~IeiN 97 (376)
..+.|.-++.++++..............+.+ .+. ...++-+|+.|.-.+ + ..+.++.+.++|+|.|.||
T Consensus 289 ~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~-~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGad~V~ig 367 (555)
T 1jvn_A 289 YYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAA-KTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKVSIG 367 (555)
T ss_dssp HHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHT-TTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTCSEEEEC
T ss_pred HHHcCCCEEEEEeCCccccccCCCchHHHHHHHHH-hhCCCcEEEeCccccchhcccccchHHHHHHHHHHcCCCEEEEC
Confidence 3455644677787765432111111112222 222 233566788775422 1 4466777778899999999
Q ss_pred CCCCCccccCCCCccccccCCHHHHHHHHHHHhc-ccCccEEEE--------------------------------ecCC
Q 017176 98 CGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAA-NTNVPVSVK--------------------------------CRIG 144 (376)
Q Consensus 98 ~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~-~~~~pv~vK--------------------------------iR~g 144 (376)
.+|- .+..+..+ ++.++.+|+++.++.+..-+ .+-+-+.+| .+-|
T Consensus 368 t~~~-~~~~~~~~-~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~G 445 (555)
T 1jvn_A 368 TDAV-YAAEKYYE-LGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQCTIKG 445 (555)
T ss_dssp HHHH-HHHHHHHH-TTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCCEEEEEEEETT
T ss_pred CHHh-hCchhhcc-ccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccccCCCCCcceeEEEEEec
Confidence 9882 21111111 33357889999999987642 221112222 2236
Q ss_pred CCCCc--cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHH
Q 017176 145 VDDHD--SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 222 (376)
Q Consensus 145 ~~~~~--~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da 222 (376)
|.+.. +..+. ++.+++.|++.|.+|++++.... .+ .+++.+.++++.. ++|||++|||.|++|+
T Consensus 446 w~~~~~~~~~e~----a~~~~~~Ga~~il~t~~~~dG~~-~G--------~d~~li~~l~~~~-~iPVIasGGi~s~~d~ 511 (555)
T 1jvn_A 446 GRESRDLGVWEL----TRACEALGAGEILLNCIDKDGSN-SG--------YDLELIEHVKDAV-KIPVIASSGAGVPEHF 511 (555)
T ss_dssp TTEEEEEEHHHH----HHHHHHTTCCEEEECCGGGTTTC-SC--------CCHHHHHHHHHHC-SSCEEECSCCCSHHHH
T ss_pred CccCCCCCHHHH----HHHHHHcCCCEEEEeCCCCCCCC-CC--------CCHHHHHHHHHhC-CccEEEECCCCCHHHH
Confidence 66532 23333 34457899999999998752111 11 1388998988764 9999999999999999
Q ss_pred HHHHH-cCcCeeEEchHHhhCCchhh
Q 017176 223 NAALR-KGAHHVMVGRAAYQNPWYTL 247 (376)
Q Consensus 223 ~~~l~-~Gad~VmiGRa~l~~P~lf~ 247 (376)
.++++ +|||+||+||+++.+||.|.
T Consensus 512 ~~~~~~~G~~gvivg~a~~~~~~~~~ 537 (555)
T 1jvn_A 512 EEAFLKTRADACLGAGMFHRGEFTVN 537 (555)
T ss_dssp HHHHHHSCCSEEEESHHHHTTSCCHH
T ss_pred HHHHHhcCChHHHHHHHHHcCCCCHH
Confidence 99998 89999999999999999863
No 62
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.40 E-value=1.2e-12 Score=132.56 Aligned_cols=132 Identities=14% Similarity=0.082 Sum_probs=92.3
Q ss_pred HHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccHHHHHHH
Q 017176 79 LAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDF 157 (376)
Q Consensus 79 ~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~~~~~~ 157 (376)
..+.++.+.++|+|.|+||.+|+. +..+.++++++++.. ++|+.++.- .+.++
T Consensus 230 ~~~~a~~l~~aG~d~I~id~a~g~----------------~~~~~~~v~~i~~~~p~~~Vi~g~v------~t~e~---- 283 (490)
T 4avf_A 230 TGERVAALVAAGVDVVVVDTAHGH----------------SKGVIERVRWVKQTFPDVQVIGGNI------ATAEA---- 283 (490)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCCS----------------BHHHHHHHHHHHHHCTTSEEEEEEE------CSHHH----
T ss_pred hHHHHHHHhhcccceEEecccCCc----------------chhHHHHHHHHHHHCCCceEEEeee------CcHHH----
Confidence 345566667789999999987653 245678888998877 778888521 12322
Q ss_pred HHHHhhcCCccEEEEccC------ccccCCCCCCCCCCCCcccHHHHHHHHhhC--CCCeEEEecCCCCHHHHHHHHHcC
Q 017176 158 IYKVSSLSPTRHFIIHSR------KALLNGISPAENRTIPPLKYEYYYALLRDF--PDLTFTLNGGINTVDEVNAALRKG 229 (376)
Q Consensus 158 i~~~~e~~Gvd~I~vh~r------~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~--~~ipVi~nGgI~s~~da~~~l~~G 229 (376)
++.+.++|+|+|.|..+ +....|.+ ...+..+.++.+.. .++|||++|||.+++|+.++++.|
T Consensus 284 -a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g--------~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~G 354 (490)
T 4avf_A 284 -AKALAEAGADAVKVGIGPGSICTTRIVAGVG--------VPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAG 354 (490)
T ss_dssp -HHHHHHTTCSEEEECSSCSTTCHHHHHTCBC--------CCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHT
T ss_pred -HHHHHHcCCCEEEECCCCCcCCCccccCCCC--------ccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcC
Confidence 23345799999998321 11111211 11256666665532 379999999999999999999999
Q ss_pred cCeeEEchHHhhCCch
Q 017176 230 AHHVMVGRAAYQNPWY 245 (376)
Q Consensus 230 ad~VmiGRa~l~~P~l 245 (376)
||+||+|++++....-
T Consensus 355 Ad~V~vGs~~~~~~Es 370 (490)
T 4avf_A 355 AYCVMMGSMFAGTEEA 370 (490)
T ss_dssp CSEEEECTTTTTBTTS
T ss_pred CCeeeecHHHhcCCCC
Confidence 9999999999986653
No 63
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.30 E-value=4.4e-11 Score=110.03 Aligned_cols=152 Identities=16% Similarity=0.182 Sum_probs=105.6
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEE--
Q 017176 63 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVK-- 140 (376)
Q Consensus 63 ~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vK-- 140 (376)
.+.|+.+..+-.++++ ++.+.++|+|.|-+ |+.++.+|+.+.++++.....+.+.+.++
T Consensus 74 ~~ipv~v~ggI~~~~~----~~~~l~~Gad~V~l---------------g~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g 134 (244)
T 1vzw_A 74 MDIKVELSGGIRDDDT----LAAALATGCTRVNL---------------GTAALETPEWVAKVIAEHGDKIAVGLDVRGT 134 (244)
T ss_dssp CSSEEEEESSCCSHHH----HHHHHHTTCSEEEE---------------CHHHHHCHHHHHHHHHHHGGGEEEEEEEETT
T ss_pred cCCcEEEECCcCCHHH----HHHHHHcCCCEEEE---------------CchHhhCHHHHHHHHHHcCCcEEEEEEccCC
Confidence 3678877766677775 44455679998855 55566788889998887654333333333
Q ss_pred --ecCCCCCCc-cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCC
Q 017176 141 --CRIGVDDHD-SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGIN 217 (376)
Q Consensus 141 --iR~g~~~~~-~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~ 217 (376)
.+-||.+.. +..+.+ +.+++.|++.|.+|++++...+. ..+++.+.++++.. ++|||++|||.
T Consensus 135 ~v~~~g~~~~~~~~~e~~----~~~~~~G~~~i~~~~~~~~~~~~---------g~~~~~~~~i~~~~-~ipvia~GGI~ 200 (244)
T 1vzw_A 135 TLRGRGWTRDGGDLYETL----DRLNKEGCARYVVTDIAKDGTLQ---------GPNLELLKNVCAAT-DRPVVASGGVS 200 (244)
T ss_dssp EECCSSSCCCCCBHHHHH----HHHHHTTCCCEEEEEC----------------CCCHHHHHHHHHTC-SSCEEEESCCC
T ss_pred EEEEcCcccCCCCHHHHH----HHHHhCCCCEEEEeccCcccccC---------CCCHHHHHHHHHhc-CCCEEEECCCC
Confidence 134676532 333432 23457999999999876421111 12478888888764 89999999999
Q ss_pred CHHHHHHHHHc---CcCeeEEchHHhhCCchhh
Q 017176 218 TVDEVNAALRK---GAHHVMVGRAAYQNPWYTL 247 (376)
Q Consensus 218 s~~da~~~l~~---Gad~VmiGRa~l~~P~lf~ 247 (376)
+++++.++++. |||+|++||+++.+||.|.
T Consensus 201 ~~~d~~~~~~~~~~Gadgv~vG~al~~~~~~~~ 233 (244)
T 1vzw_A 201 SLDDLRAIAGLVPAGVEGAIVGKALYAKAFTLE 233 (244)
T ss_dssp SHHHHHHHHTTGGGTEEEEEECHHHHTTSSCHH
T ss_pred CHHHHHHHHhhccCCCceeeeeHHHHcCCCCHH
Confidence 99999999996 9999999999999999753
No 64
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=99.29 E-value=5.1e-12 Score=117.69 Aligned_cols=181 Identities=15% Similarity=0.108 Sum_probs=116.1
Q ss_pred HHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCc
Q 017176 24 YRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSP 103 (376)
Q Consensus 24 ~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~ 103 (376)
+.....+.| +..+..-.+.. .+.+.+.+... ..++-+|++|... .. ++.+.+ +|+|-|-+
T Consensus 43 ~A~~~~~~G-a~~l~vvDL~~----~n~~~i~~i~~----~~~~pv~vgGGir-~~-~~~~~l--~Ga~~Vii------- 102 (260)
T 2agk_A 43 YAKLYKDRD-VQGCHVIKLGP----NNDDAAREALQ----ESPQFLQVGGGIN-DT-NCLEWL--KWASKVIV------- 102 (260)
T ss_dssp HHHHHHHTT-CTTCEEEEESS----SCHHHHHHHHH----HSTTTSEEESSCC-TT-THHHHT--TTCSCEEE-------
T ss_pred HHHHHHHcC-CCEEEEEeCCC----CCHHHHHHHHh----cCCceEEEeCCCC-HH-HHHHHh--cCCCEEEE-------
Confidence 444456665 66555555553 11111222221 2234567877665 33 566655 89886643
Q ss_pred cccCCCCccccccCC-----HHHHHHHHHHHh-cccCccEEEEec---------CCCCCCc--cHH-HHHHHHHHHhhcC
Q 017176 104 KVAGHGCFGVSLMLD-----PKFVGEAMSVIA-ANTNVPVSVKCR---------IGVDDHD--SYN-QLCDFIYKVSSLS 165 (376)
Q Consensus 104 ~v~r~g~yG~~l~~~-----~~~~~eiv~~v~-~~~~~pv~vKiR---------~g~~~~~--~~~-~~~~~i~~~~e~~ 165 (376)
|+.++++ |+++.++++++. +.+-+++.+|++ .||.+.. +.. +++ +.+++.
T Consensus 103 --------gs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a----~~~~~~ 170 (260)
T 2agk_A 103 --------TSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTF----RELRKY 170 (260)
T ss_dssp --------CGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHH----HHHTTT
T ss_pred --------CcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHH----HHHHHh
Confidence 6667777 999999999997 443334444422 2676532 222 443 345678
Q ss_pred CccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCC---CCeEEEecCCCCHHHHHHHHH-c-CcCeeEEchHH-
Q 017176 166 PTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP---DLTFTLNGGINTVDEVNAALR-K-GAHHVMVGRAA- 239 (376)
Q Consensus 166 Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~---~ipVi~nGgI~s~~da~~~l~-~-Gad~VmiGRa~- 239 (376)
++.|++|+++..... .+ .+++.+.++.+..+ ++|||++|||.|++|+.++++ + |||+||+||++
T Consensus 171 -a~~il~t~i~~dG~~-~G--------~d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al~ 240 (260)
T 2agk_A 171 -TNEFLIHAADVEGLC-GG--------IDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSLD 240 (260)
T ss_dssp -CSEEEEEC--------CC--------CCHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTBG
T ss_pred -cCEEEEEeeccccCc-CC--------CCHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCHH
Confidence 999999998753211 11 14889988887643 899999999999999999998 5 99999999997
Q ss_pred -hhCC-chh
Q 017176 240 -YQNP-WYT 246 (376)
Q Consensus 240 -l~~P-~lf 246 (376)
+.+| |.|
T Consensus 241 l~~g~~~~~ 249 (260)
T 2agk_A 241 IFGGNLVKF 249 (260)
T ss_dssp GGTCSSBCH
T ss_pred HcCCCCCCH
Confidence 8888 875
No 65
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.23 E-value=1.4e-10 Score=118.13 Aligned_cols=138 Identities=17% Similarity=0.079 Sum_probs=96.7
Q ss_pred HHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccHHHHHHH
Q 017176 79 LAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDF 157 (376)
Q Consensus 79 ~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~~~~~~ 157 (376)
..+.++.+.++|+|.|+||.+|. +++...++++++++.+ ++||.+|- + .+.++
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G----------------~~~~~~~~i~~i~~~~~~~pvi~~~---v---~t~~~---- 309 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQG----------------NSVYQIAMVHYIKQKYPHLQVIGGN---V---VTAAQ---- 309 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC----------------CSHHHHHHHHHHHHHCTTCEEEEEE---E---CSHHH----
T ss_pred hHHHHHHHHHcCCCEEEeeccCC----------------cchhHHHHHHHHHHhCCCCceEecc---c---chHHH----
Confidence 45566778889999999998652 2356788999999988 88998861 1 22322
Q ss_pred HHHHhhcCCccEEEEcc--C-ccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeE
Q 017176 158 IYKVSSLSPTRHFIIHS--R-KALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVM 234 (376)
Q Consensus 158 i~~~~e~~Gvd~I~vh~--r-~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~Vm 234 (376)
++.++++|+|+|.|.. + ....... ..+.......+..+.++++.. ++|||++|||.+++|+.++++.|||+||
T Consensus 310 -a~~l~~aGad~I~vg~~~G~~~~t~~~--~~~g~~~~~~~~~~~~~~~~~-~ipVia~GGI~~~~di~kala~GAd~V~ 385 (514)
T 1jcn_A 310 -AKNLIDAGVDGLRVGMGCGSICITQEV--MACGRPQGTAVYKVAEYARRF-GVPIIADGGIQTVGHVVKALALGASTVM 385 (514)
T ss_dssp -HHHHHHHTCSEEEECSSCSCCBTTBCC--CSCCCCHHHHHHHHHHHHGGG-TCCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred -HHHHHHcCCCEEEECCCCCcccccccc--cCCCccchhHHHHHHHHHhhC-CCCEEEECCCCCHHHHHHHHHcCCCeee
Confidence 2334579999999821 1 1000000 000000122356667777664 8999999999999999999999999999
Q ss_pred EchHHhhCCchh
Q 017176 235 VGRAAYQNPWYT 246 (376)
Q Consensus 235 iGRa~l~~P~lf 246 (376)
+||+++.+|+..
T Consensus 386 iG~~~l~~~e~~ 397 (514)
T 1jcn_A 386 MGSLLAATTEAP 397 (514)
T ss_dssp ESTTTTTSTTSS
T ss_pred ECHHHHcCCcCC
Confidence 999999999865
No 66
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.22 E-value=4.4e-12 Score=117.13 Aligned_cols=153 Identities=15% Similarity=0.181 Sum_probs=32.6
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHh-ccc----Ccc-
Q 017176 63 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIA-ANT----NVP- 136 (376)
Q Consensus 63 ~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~-~~~----~~p- 136 (376)
.+.|+++.=+-.++++.. .+.+.|+|+|-| |..++.+|+++.++.+..- +.+ +.+
T Consensus 78 ~~ipvi~~Ggi~~~~~~~----~~l~~Gad~V~i---------------g~~~l~dp~~~~~~~~~~g~~~iv~~ld~~~ 138 (247)
T 3tdn_A 78 TTLPIIASGGAGKMEHFL----EAFLRGADKVSI---------------NTAAVENPSLITQIAQTFGSQAVVVAIDAKR 138 (247)
T ss_dssp CCSCEEEESCCCSHHHHH----HHHHTTCSEECC---------------SHHHHHCTHHHHHHHHHHC------------
T ss_pred CCCCEEEeCCCCCHHHHH----HHHHcCCCeeeh---------------hhHHhhChHHHHHHHHHhCCCcEEEEEEecc
Confidence 356777654445666533 334678888833 6677788998888887762 222 222
Q ss_pred ----EEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE
Q 017176 137 ----VSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL 212 (376)
Q Consensus 137 ----v~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~ 212 (376)
..|+++ ||.+.... +..+ +++.+++.|++.|.+|.++.. |.. ...+++.+.++++. .++|||+
T Consensus 139 ~~~~~~v~~~-g~~~~~~~-~~~~-~a~~~~~~G~~~i~~t~~~~~--g~~-------~g~~~~~~~~i~~~-~~iPvia 205 (247)
T 3tdn_A 139 VDGEFMVFTY-SGKKNTGI-LLRD-WVVEVEKRGAGEILLTSIDRD--GTK-------SGYDTEMIRFVRPL-TTLPIIA 205 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCEEEEEC-CCcccCCC-CHHH-HHHHHHhcCCCEEEEecccCC--CCc-------CCCCHHHHHHHHHh-CCCCEEE
Confidence 245555 66653211 1222 234556799999999987542 110 01125566666665 4899999
Q ss_pred ecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchhh
Q 017176 213 NGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTL 247 (376)
Q Consensus 213 nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~ 247 (376)
+|||.|++|+.++++.|||+|++||+++.+||+|.
T Consensus 206 ~GGI~~~~d~~~~~~~Gad~v~vg~al~~~p~~~~ 240 (247)
T 3tdn_A 206 SGGAGKMEHFLEAFLRGADKVSINTAAVENPSLIT 240 (247)
T ss_dssp -----------------------------------
T ss_pred ECCCCCHHHHHHHHHcCCcHhhccHHHHcCcHHHH
Confidence 99999999999999999999999999999999863
No 67
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.21 E-value=6.4e-11 Score=120.46 Aligned_cols=130 Identities=16% Similarity=0.168 Sum_probs=88.1
Q ss_pred HHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccHHHHHHHH
Q 017176 80 AKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFI 158 (376)
Q Consensus 80 ~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~~~~~~i 158 (376)
.+.++.+.++|+|.|.|+..+|. ...+.++++++++.. +.|+.++-- .+.++
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~----------------~~~v~~~i~~i~~~~~~~~vi~g~v------~t~e~----- 310 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGH----------------SQGVIDKVKEVRAKYPSLNIIAGNV------ATAEA----- 310 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTT----------------SHHHHHHHHHHHHHCTTSEEEEEEE------CSHHH-----
T ss_pred HHHHHHHHhhccceEEecccccc----------------hhhhhhHHHHHHHhCCCceEEeeee------ccHHH-----
Confidence 34455667789999999976542 244678888888876 478887521 12332
Q ss_pred HHHhhcCCccEEEEccC------ccccCCCCCCCCCCCCcccHHHHHHH---HhhCCCCeEEEecCCCCHHHHHHHHHcC
Q 017176 159 YKVSSLSPTRHFIIHSR------KALLNGISPAENRTIPPLKYEYYYAL---LRDFPDLTFTLNGGINTVDEVNAALRKG 229 (376)
Q Consensus 159 ~~~~e~~Gvd~I~vh~r------~~~~~g~~~~~~~~~~~~~~~~v~~~---~~~~~~ipVi~nGgI~s~~da~~~l~~G 229 (376)
++.+.++|+|+|.|..+ +....|.+ .+ .+..+.++ .++. ++|||++|||.+++|+.++++.|
T Consensus 311 a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g------~p--~~~~l~~v~~~~~~~-~iPVIa~GGI~~~~di~kala~G 381 (511)
T 3usb_A 311 TKALIEAGANVVKVGIGPGSICTTRVVAGVG------VP--QLTAVYDCATEARKH-GIPVIADGGIKYSGDMVKALAAG 381 (511)
T ss_dssp HHHHHHHTCSEEEECSSCSTTCCHHHHHCCC------CC--HHHHHHHHHHHHHTT-TCCEEEESCCCSHHHHHHHHHTT
T ss_pred HHHHHHhCCCEEEECCCCccccccccccCCC------CC--cHHHHHHHHHHHHhC-CCcEEEeCCCCCHHHHHHHHHhC
Confidence 23345789999998221 11111211 11 24444444 4443 79999999999999999999999
Q ss_pred cCeeEEchHHhhCCch
Q 017176 230 AHHVMVGRAAYQNPWY 245 (376)
Q Consensus 230 ad~VmiGRa~l~~P~l 245 (376)
||+||+||+++....-
T Consensus 382 A~~V~vGs~~~~~~es 397 (511)
T 3usb_A 382 AHVVMLGSMFAGVAES 397 (511)
T ss_dssp CSEEEESTTTTTBTTS
T ss_pred chhheecHHHhcCccC
Confidence 9999999998876553
No 68
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.18 E-value=1.4e-09 Score=100.26 Aligned_cols=151 Identities=9% Similarity=0.044 Sum_probs=104.6
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhc-ccCccE----
Q 017176 63 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAA-NTNVPV---- 137 (376)
Q Consensus 63 ~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~-~~~~pv---- 137 (376)
.+.|+++.-+-.++++ ++.+.++|+|+|-+ |..++.+|+.+.++++.... ...+.+
T Consensus 73 ~~ipvi~~ggI~~~~~----~~~~~~~Gad~V~l---------------g~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~ 133 (253)
T 1thf_D 73 IDIPFTVGGGIHDFET----ASELILRGADKVSI---------------NTAAVENPSLITQIAQTFGSQAVVVAIDAKR 133 (253)
T ss_dssp CCSCEEEESSCCSHHH----HHHHHHTTCSEEEE---------------SHHHHHCTHHHHHHHHHHCGGGEEEEEEEEE
T ss_pred CCCCEEEeCCCCCHHH----HHHHHHcCCCEEEE---------------ChHHHhChHHHHHHHHHcCCCcEEEEEEEEc
Confidence 4678887766667765 33444579998855 55566778888888888642 211222
Q ss_pred -----EEEecCCCCCCc--cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeE
Q 017176 138 -----SVKCRIGVDDHD--SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTF 210 (376)
Q Consensus 138 -----~vKiR~g~~~~~--~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipV 210 (376)
.|+++ ||.+.. +..+.++ .+++.|++.|.+|+++....+. + .+++.+.++++.. ++||
T Consensus 134 ~~g~~~v~~~-g~~~~~~~~~~e~~~----~~~~~G~~~i~~~~~~~~g~~~-g--------~~~~~~~~l~~~~-~ipv 198 (253)
T 1thf_D 134 VDGEFMVFTY-SGKKNTGILLRDWVV----EVEKRGAGEILLTSIDRDGTKS-G--------YDTEMIRFVRPLT-TLPI 198 (253)
T ss_dssp ETTEEEEEET-TTTEEEEEEHHHHHH----HHHHTTCSEEEEEETTTTTSCS-C--------CCHHHHHHHGGGC-CSCE
T ss_pred cCCcEEEEEC-CCccccCCCHHHHHH----HHHHCCCCEEEEEeccCCCCCC-C--------CCHHHHHHHHHhc-CCCE
Confidence 45553 565421 2334332 3346899999999765421111 1 1378888887764 8999
Q ss_pred EEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchhh
Q 017176 211 TLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTL 247 (376)
Q Consensus 211 i~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~ 247 (376)
|++|||.+++|+.+++++|||+|++||+++.+||-+.
T Consensus 199 ia~GGI~~~~d~~~~~~~Gadgv~vGsal~~~~~~~~ 235 (253)
T 1thf_D 199 IASGGAGKMEHFLEAFLAGADAALAASVFHFREIDVR 235 (253)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEESHHHHTTCSCHH
T ss_pred EEECCCCCHHHHHHHHHcCChHHHHHHHHHcCCCCHH
Confidence 9999999999999999999999999999999997653
No 69
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.17 E-value=3.1e-10 Score=102.84 Aligned_cols=164 Identities=15% Similarity=0.109 Sum_probs=101.2
Q ss_pred EEEEecCC----CHHHHHHHHHHHHHCCCCEEEec-----------CCCCCccccCCC--C-----------------cc
Q 017176 67 IVLQIGGS----NLDNLAKATELANAYNYDEINLN-----------CGCPSPKVAGHG--C-----------------FG 112 (376)
Q Consensus 67 ~~vQL~g~----~~~~~~~aa~~~~~~G~d~IeiN-----------~gcP~~~v~r~g--~-----------------yG 112 (376)
+.+|+.+. +++...+.|+.+.++|+++|.++ .++|.-...+++ . .|
T Consensus 9 ~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~G 88 (223)
T 1y0e_A 9 VSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRANTKEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQ 88 (223)
T ss_dssp EECCCCTTSTTCCHHHHHHHHHHHHHHTCSEEEEESHHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHT
T ss_pred EEecCCCCCCCCCCccHHHHHHHHHHCCCeeeccCCHHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCC
Confidence 56677766 56777778888888888887775 356652111111 0 01
Q ss_pred cc-------ccCCH-HHHHHHHHHHhccc-CccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEc--cCccccCC
Q 017176 113 VS-------LMLDP-KFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIH--SRKALLNG 181 (376)
Q Consensus 113 ~~-------l~~~~-~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh--~r~~~~~g 181 (376)
+. ...+| ..+.++++.+++.. +.++.+.+. +.++.. .+++.|+|+|.+. +.+....+
T Consensus 89 ad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~-------t~~e~~-----~~~~~G~d~i~~~~~g~t~~~~~ 156 (223)
T 1y0e_A 89 CEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIA-------TVEEAK-----NAARLGFDYIGTTLHGYTSYTQG 156 (223)
T ss_dssp CSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECS-------SHHHHH-----HHHHTTCSEEECTTTTSSTTSTT
T ss_pred CCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCC-------CHHHHH-----HHHHcCCCEEEeCCCcCcCCCCC
Confidence 11 11122 23456666666654 555554321 233322 2457899998763 33221111
Q ss_pred CCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchhhHhh
Q 017176 182 ISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHV 250 (376)
Q Consensus 182 ~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~ 250 (376)
. ......++.++++++.. ++||+++|||.|++++.++++.|||+|++||+++. |+...+.+
T Consensus 157 ~------~~~~~~~~~~~~~~~~~-~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~al~~-p~~~~~~~ 217 (223)
T 1y0e_A 157 Q------LLYQNDFQFLKDVLQSV-DAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAITR-PKEITKRF 217 (223)
T ss_dssp C------CTTHHHHHHHHHHHHHC-CSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC-HHHHHHHH
T ss_pred C------CCCcccHHHHHHHHhhC-CCCEEEecCCCCHHHHHHHHHcCCCEEEEChHHcC-cHHHHHHH
Confidence 0 00223467788888775 89999999999999999999999999999999665 87654443
No 70
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=99.16 E-value=2.1e-10 Score=131.97 Aligned_cols=202 Identities=11% Similarity=0.043 Sum_probs=134.0
Q ss_pred CCcEEEccCC-CCChHHHHHHHHHhCCCcEE-EecceeecccccccchhhhhhccCCCCCCEEEEecCCCHH---HHHHH
Q 017176 8 PPWFSVAPMM-DWTDNHYRTLARLISKHAWL-YTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLD---NLAKA 82 (376)
Q Consensus 8 ~nri~lAPM~-~~td~~~r~~~~~~Gg~gl~-~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~~~---~~~~a 82 (376)
+.||++|||. ++++..+...+.+.||.|.+ -..+.+.+.+.....+++ +..+.+.|++++++-.+|+ .+.+.
T Consensus 582 ~~PIi~a~M~~~vs~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~vk---~~~~~~~p~gvN~~~~~p~~~~~~~~~ 658 (2060)
T 2uva_G 582 VPPVMVAGMTPTTVPWDFVAATMNAGYHIELAGGGYYNAQKMSDAISKIE---KAIPPGRGITVNLIYVNPRAMGWQIPL 658 (2060)
T ss_dssp SCSEEECCCTTTTCSHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHHHG---GGSCTTCCEEEEEETTCTTHHHHHHHH
T ss_pred cceEEecCCCCccccHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHHHH---hhcccCCCeEecccccCcccchhHHHH
Confidence 6799999999 69999999999999988876 334444333322222222 2222478999999876554 24567
Q ss_pred HHHHHHCCCCE--EEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHH
Q 017176 83 TELANAYNYDE--INLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYK 160 (376)
Q Consensus 83 a~~~~~~G~d~--IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~ 160 (376)
.+.+.+.|++. |.+..|.|. .+.+.++++.. ++++.. +-.+. .+..+.+.+
T Consensus 659 ~~~~~~~gv~i~gv~~~~G~p~----------------~e~~~~~l~~~----gi~~i~-~v~~~------~~a~~~v~~ 711 (2060)
T 2uva_G 659 LGRLRADGVPIEGLTIGAGVPS----------------IEVANEYIQTL----GIRHIS-FKPGS------VDAIQQVIN 711 (2060)
T ss_dssp HHHHHTTTCCEEEEEEESSCCC----------------HHHHHHHHHHS----CCSEEE-ECCCS------HHHHHHHHH
T ss_pred HHHHHHcCCCcceEeecCCCCC----------------HHHHHHHHHHc----CCeEEE-ecCCH------HHHHHHHHH
Confidence 77888889988 888776663 22334444432 566653 22222 122222222
Q ss_pred HhhcCCccEEE---EccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHH-----------
Q 017176 161 VSSLSPTRHFI---IHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL----------- 226 (376)
Q Consensus 161 ~~e~~Gvd~I~---vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l----------- 226 (376)
+.++|+|.|+ +.|... +|+.+. ..........+.++++.. ++|||+.|||.|++++.+++
T Consensus 712 -l~~aG~D~iV~~q~~G~ea--GGH~g~--~d~~~~~l~lv~~i~~~~-~ipviaaGGI~~g~~i~aaltg~ws~~~g~p 785 (2060)
T 2uva_G 712 -IAKANPTFPIILQWTGGRG--GGHHSF--EDFHQPILLMYSRIRKCS-NIVLVAGSGFGGSEDTYPYLTGSWSTKFGYP 785 (2060)
T ss_dssp -HHHHCTTSCEEEEECCTTS--SSSCCS--CCSHHHHHHHHHHHHTST-TEEEEEESSCCSHHHHHHHHHTCGGGTTTSC
T ss_pred -HHHcCCCEEEEeeeEcccC--CCCCCc--ccccchHHHHHHHHHHHc-CCCEEEeCCCCCHHHHHHHhcCcchhhcCCC
Confidence 3468999999 777553 232221 111122356777877754 89999999999999999999
Q ss_pred HcCcCeeEEchHHhhCCch
Q 017176 227 RKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 227 ~~Gad~VmiGRa~l~~P~l 245 (376)
..|||+||+|+.++....-
T Consensus 786 alGAdgV~~GT~f~~t~Ea 804 (2060)
T 2uva_G 786 PMPFDGCMFGSRMMTAKEA 804 (2060)
T ss_dssp CCCCSCEEESGGGGGBTTS
T ss_pred CCCCCEEEEchhhhcCcCC
Confidence 8899999999999988664
No 71
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=99.16 E-value=3.3e-10 Score=105.97 Aligned_cols=198 Identities=13% Similarity=0.093 Sum_probs=122.9
Q ss_pred ecCCcEEEccCCCCChHH-HHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCCCCEEEEecCCC-----H--H
Q 017176 6 YLPPWFSVAPMMDWTDNH-YRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSN-----L--D 77 (376)
Q Consensus 6 ~l~nri~lAPM~~~td~~-~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~-----~--~ 77 (376)
.+.++++++||.+..+.. +...+.+.| +..+++.. +...... +......|+++|+.+.. + +
T Consensus 31 ~id~~~~l~p~~~~~~~~~~~~~~~~~g-~~~i~~~~----~~~~~~~------~~~~~~~~~~v~~~~~~~~~~d~~~~ 99 (273)
T 2qjg_A 31 PMDHGVSNGPIKGLIDIRKTVNDVAEGG-ANAVLLHK----GIVRHGH------RGYGKDVGLIIHLSGGTAISPNPLKK 99 (273)
T ss_dssp ECCHHHHHCSCTTSSSHHHHHHHHHHHT-CSEEEECH----HHHHSCC------CSSSCCCEEEEECEECCTTSSSTTCC
T ss_pred EcccccccCCCcchhhHHHHHHHHHhcC-CCEEEeCH----HHHHHHH------HhhcCCCCEEEEEcCCCcCCCCcccc
Confidence 356677789999988875 333445666 56555432 1111110 11123568899987544 1 1
Q ss_pred HHHHHHHHHHHCCCCEE--EecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecC-CCC--CCccHH
Q 017176 78 NLAKATELANAYNYDEI--NLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI-GVD--DHDSYN 152 (376)
Q Consensus 78 ~~~~aa~~~~~~G~d~I--eiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~-g~~--~~~~~~ 152 (376)
.+.+.++.+.++|+|.| .+|.+|+.. ..+ .+.+.++++..++ .++|+.+.+-. |+. +..+..
T Consensus 100 ~~~~~v~~a~~~Ga~~v~~~l~~~~~~~---------~~~---~~~~~~v~~~~~~-~g~~viv~~~~~G~~l~~~~~~~ 166 (273)
T 2qjg_A 100 VIVTTVEEAIRMGADAVSIHVNVGSDED---------WEA---YRDLGMIAETCEY-WGMPLIAMMYPRGKHIQNERDPE 166 (273)
T ss_dssp EECSCHHHHHHTTCSEEEEEEEETSTTH---------HHH---HHHHHHHHHHHHH-HTCCEEEEEEECSTTCSCTTCHH
T ss_pred hHHHHHHHHHHcCCCEEEEEEecCCCCH---------HHH---HHHHHHHHHHHHH-cCCCEEEEeCCCCcccCCCCCHh
Confidence 22456677788999999 777776521 111 1344455555442 47888887521 221 001122
Q ss_pred HHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCC--HHHH----HHHH
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINT--VDEV----NAAL 226 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s--~~da----~~~l 226 (376)
+ +..+++.+++.|+|+|.++.. ..++.+.++++.. ++||++.|||.+ .+|+ .+++
T Consensus 167 ~-~~~~a~~a~~~Gad~i~~~~~-----------------~~~~~l~~i~~~~-~ipvva~GGi~~~~~~~~~~~~~~~~ 227 (273)
T 2qjg_A 167 L-VAHAARLGAELGADIVKTSYT-----------------GDIDSFRDVVKGC-PAPVVVAGGPKTNTDEEFLQMIKDAM 227 (273)
T ss_dssp H-HHHHHHHHHHTTCSEEEECCC-----------------SSHHHHHHHHHHC-SSCEEEECCSCCSSHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHcCCCEEEECCC-----------------CCHHHHHHHHHhC-CCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 2 222334556899999998831 1277888887765 899999999994 8884 4445
Q ss_pred HcCcCeeEEchHHhhCCchh
Q 017176 227 RKGAHHVMVGRAAYQNPWYT 246 (376)
Q Consensus 227 ~~Gad~VmiGRa~l~~P~lf 246 (376)
+.||++|++||+++..||.+
T Consensus 228 ~~Ga~gv~vg~~i~~~~~~~ 247 (273)
T 2qjg_A 228 EAGAAGVAVGRNIFQHDDVV 247 (273)
T ss_dssp HHTCSEEECCHHHHTSSSHH
T ss_pred HcCCcEEEeeHHhhCCCCHH
Confidence 68999999999999999863
No 72
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.15 E-value=4.5e-10 Score=103.16 Aligned_cols=146 Identities=17% Similarity=0.188 Sum_probs=99.4
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccE---E
Q 017176 64 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPV---S 138 (376)
Q Consensus 64 ~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv---~ 138 (376)
+.|+++.=+-.++++..+ +.+.|+|+|-+ |..++.+|+.+.++ +...+.+ ++.+ .
T Consensus 73 ~ipvi~~Ggi~~~~~~~~----~~~~Gad~V~l---------------g~~~l~~p~~~~~~-~~~g~~i~~~~d~~~~~ 132 (241)
T 1qo2_A 73 AEHIQIGGGIRSLDYAEK----LRKLGYRRQIV---------------SSKVLEDPSFLKSL-REIDVEPVFSLDTRGGR 132 (241)
T ss_dssp GGGEEEESSCCSHHHHHH----HHHTTCCEEEE---------------CHHHHHCTTHHHHH-HTTTCEEEEEEEEETTE
T ss_pred CCcEEEECCCCCHHHHHH----HHHCCCCEEEE---------------CchHhhChHHHHHH-HHcCCcEEEEEEecCCE
Confidence 456655433345553333 44478888833 66667788888887 6654222 2222 4
Q ss_pred EEecCCCCCCc--cHHHHHHHHHHHhhcCCccEEEEccCccc--cCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEec
Q 017176 139 VKCRIGVDDHD--SYNQLCDFIYKVSSLSPTRHFIIHSRKAL--LNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG 214 (376)
Q Consensus 139 vKiR~g~~~~~--~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~--~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nG 214 (376)
|++ .||.+.. +..+.+ +.+++.|++.|.+|+++.. ..| .+++.+.++++.. ++|||++|
T Consensus 133 v~~-~g~~~~~~~~~~e~~----~~~~~~G~~~i~~t~~~~~g~~~g-----------~~~~~i~~l~~~~-~iPvia~G 195 (241)
T 1qo2_A 133 VAF-KGWLAEEEIDPVSLL----KRLKEYGLEEIVHTEIEKDGTLQE-----------HDFSLTKKIAIEA-EVKVLAAG 195 (241)
T ss_dssp ECC-TTCSSCSCCCHHHHH----HHHHTTTCCEEEEEETTHHHHTCC-----------CCHHHHHHHHHHH-TCEEEEES
T ss_pred EEE-CCceecCCCCHHHHH----HHHHhCCCCEEEEEeecccccCCc-----------CCHHHHHHHHHhc-CCcEEEEC
Confidence 445 3676532 344443 2345799999999987542 122 1388888888765 89999999
Q ss_pred CCCCHHHHHHHHHc-----C-cCeeEEchHHhhCCchh
Q 017176 215 GINTVDEVNAALRK-----G-AHHVMVGRAAYQNPWYT 246 (376)
Q Consensus 215 gI~s~~da~~~l~~-----G-ad~VmiGRa~l~~P~lf 246 (376)
||.+++|+.++++. | ||+|++||+++..+.-+
T Consensus 196 GI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~~~~~ 233 (241)
T 1qo2_A 196 GISSENSLKTAQKVHTETNGLLKGVIVGRAFLEGILTV 233 (241)
T ss_dssp SCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTTSSCH
T ss_pred CCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcCCCCH
Confidence 99999999999985 9 99999999999998753
No 73
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.11 E-value=4.7e-10 Score=102.50 Aligned_cols=105 Identities=11% Similarity=0.118 Sum_probs=73.7
Q ss_pred HHHHHHHHhccc-CccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEE--EEccCccccCCCCCCCCCCCCcccHHHH
Q 017176 122 VGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHF--IIHSRKALLNGISPAENRTIPPLKYEYY 198 (376)
Q Consensus 122 ~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I--~vh~r~~~~~g~~~~~~~~~~~~~~~~v 198 (376)
+.++++.+++.. +.++.+.++ +.++. ..+.+.|+|+| ++++.+....+. ...+++.+
T Consensus 120 ~~~~i~~i~~~~~~~~v~~~~~-------t~~ea-----~~a~~~Gad~i~~~v~g~~~~~~~~--------~~~~~~~i 179 (234)
T 1yxy_A 120 IASFIRQVKEKYPNQLLMADIS-------TFDEG-----LVAHQAGIDFVGTTLSGYTPYSRQE--------AGPDVALI 179 (234)
T ss_dssp HHHHHHHHHHHCTTCEEEEECS-------SHHHH-----HHHHHTTCSEEECTTTTSSTTSCCS--------SSCCHHHH
T ss_pred HHHHHHHHHHhCCCCeEEEeCC-------CHHHH-----HHHHHcCCCEEeeeccccCCCCcCC--------CCCCHHHH
Confidence 456777777655 566666433 23332 22346999999 777764311111 12347778
Q ss_pred HHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchhhHh
Q 017176 199 YALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGH 249 (376)
Q Consensus 199 ~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~ 249 (376)
+++++. ++||+++|||.|++++.++++.|||+|++||+++. |+...+.
T Consensus 180 ~~~~~~--~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~~-p~~~~~~ 227 (234)
T 1yxy_A 180 EALCKA--GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITR-PKEIAER 227 (234)
T ss_dssp HHHHHT--TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHHC-HHHHHHH
T ss_pred HHHHhC--CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHhC-hHHHHHH
Confidence 888765 89999999999999999999999999999999887 7654433
No 74
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.10 E-value=2.2e-09 Score=98.36 Aligned_cols=149 Identities=13% Similarity=0.121 Sum_probs=103.5
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhc-----ccCc---
Q 017176 64 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAA-----NTNV--- 135 (376)
Q Consensus 64 ~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~-----~~~~--- 135 (376)
+.|+++..+-.+++++ +.+.++|+|+|.++. .++.+|+.+.++.+.... .++.
T Consensus 77 ~ipvi~~g~i~~~~~~----~~~~~~Gad~V~i~~---------------~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~ 137 (253)
T 1h5y_A 77 SIPVLVGGGVRSLEDA----TTLFRAGADKVSVNT---------------AAVRNPQLVALLAREFGSQSTVVAIDAKWN 137 (253)
T ss_dssp SSCEEEESSCCSHHHH----HHHHHHTCSEEEESH---------------HHHHCTHHHHHHHHHHCGGGEEEEEEEEEC
T ss_pred CCCEEEECCCCCHHHH----HHHHHcCCCEEEECh---------------HHhhCcHHHHHHHHHcCCCcEEEEEEeecC
Confidence 5788877666777654 344457999999862 234567777777776532 1122
Q ss_pred --cEEEEecCCCCCC-ccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE
Q 017176 136 --PVSVKCRIGVDDH-DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL 212 (376)
Q Consensus 136 --pv~vKiR~g~~~~-~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~ 212 (376)
++.|+++.++.+. .+..+.++ .+.+.|+|.|.+|+++....+. ...++.+.++++.. ++||++
T Consensus 138 ~g~~~v~~~~~~~~~~~~~~e~~~----~~~~~G~d~i~~~~~~~~g~~~---------~~~~~~i~~l~~~~-~~pvia 203 (253)
T 1h5y_A 138 GEYYEVYVKGGREATGLDAVKWAK----EVEELGAGEILLTSIDRDGTGL---------GYDVELIRRVADSV-RIPVIA 203 (253)
T ss_dssp SSSEEEEETTTTEEEEEEHHHHHH----HHHHHTCSEEEEEETTTTTTCS---------CCCHHHHHHHHHHC-SSCEEE
T ss_pred CCcEEEEEeCCeecCCCCHHHHHH----HHHhCCCCEEEEecccCCCCcC---------cCCHHHHHHHHHhc-CCCEEE
Confidence 1578888765332 13333332 3346899999999876421110 11377888887764 899999
Q ss_pred ecCCCCHHHHHHHHHcCcCeeEEchHHhhCCch
Q 017176 213 NGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 213 nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
+|||.+++++.++++.|||+|++||+++.+++-
T Consensus 204 ~GGi~~~~~~~~~~~~Ga~~v~vgsal~~~~~~ 236 (253)
T 1h5y_A 204 SGGAGRVEHFYEAAAAGADAVLAASLFHFRVLS 236 (253)
T ss_dssp ESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSC
T ss_pred eCCCCCHHHHHHHHHcCCcHHHHHHHHHcCCCC
Confidence 999999999999999999999999999988764
No 75
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.09 E-value=1.5e-09 Score=100.96 Aligned_cols=151 Identities=11% Similarity=0.046 Sum_probs=92.0
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCcccccc-C--CHHHHHHHHHHHh---cc--cC
Q 017176 63 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLM-L--DPKFVGEAMSVIA---AN--TN 134 (376)
Q Consensus 63 ~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~-~--~~~~~~eiv~~v~---~~--~~ 134 (376)
.+.|+++.=+-++++++.++ .+.|+|+|-+. ..++ . +++.+.++++... +. ++
T Consensus 73 ~~iPvi~~ggi~~~~~i~~~----~~~Gad~v~lg---------------~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~ 133 (266)
T 2w6r_A 73 TTLPIIASGGAGKMEHFLEA----FLAGADKALAA---------------SVFHFREIDMRELKEYLKKHGGSGQAVVVA 133 (266)
T ss_dssp CCSCEEEESCCCSTHHHHHH----HHHTCSEEECC---------------CCC------CHHHHHHCC----CCCEEEEE
T ss_pred cCCCEEEECCCCCHHHHHHH----HHcCCcHhhhh---------------HHHHhCCCCHHHHHHHHHHcCCCCCEEEEE
Confidence 36788776444566664433 34689988663 2223 2 6677777766554 12 22
Q ss_pred ccE-------EEEecCCCCCC--ccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC
Q 017176 135 VPV-------SVKCRIGVDDH--DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF 205 (376)
Q Consensus 135 ~pv-------~vKiR~g~~~~--~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~ 205 (376)
+++ .|+++ ||.+. .+..+.++ .+++.|++.|.+|+++.. |.. ...+++.+.++++.
T Consensus 134 ~d~~~~~g~~~v~~~-g~~~~~~~~~~e~~~----~~~~~G~~~i~~t~~~~~--g~~-------~g~~~~~i~~l~~~- 198 (266)
T 2w6r_A 134 IDAKRVDGEFMVFTH-SGKKNTGILLRDWVV----EVEKRGAGEILLTSIDRD--GTK-------SGYDTEMIRFVRPL- 198 (266)
T ss_dssp EEEEEETTEEEEEET-TTTEEEEEEHHHHHH----HHHHTTCSEEEEEETTTT--TTC-------SCCCHHHHHHHGGG-
T ss_pred EEEEecCCCEEEEEC-CCceecchhHHHHHH----HHHHcCCCEEEEEeecCC--CCc-------CCCCHHHHHHHHHH-
Confidence 332 45554 56542 12334332 345789999999876532 110 01137888888776
Q ss_pred CCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchhh
Q 017176 206 PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTL 247 (376)
Q Consensus 206 ~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~ 247 (376)
+++|||++|||.+++|+.+++++|||+|++|++++.+||.+.
T Consensus 199 ~~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~~~~~~~ 240 (266)
T 2w6r_A 199 TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDMR 240 (266)
T ss_dssp CCSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC-------
T ss_pred cCCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHcCCCCHH
Confidence 499999999999999999999999999999999999998753
No 76
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=99.09 E-value=7.4e-10 Score=105.45 Aligned_cols=151 Identities=21% Similarity=0.245 Sum_probs=92.6
Q ss_pred HHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCC------------
Q 017176 81 KATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDH------------ 148 (376)
Q Consensus 81 ~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~------------ 148 (376)
+.|+.+.++|+|+|.+. ||.+...+... |..++++++.+.++. +.+++|+.+|+|+|+.+.
T Consensus 32 ~~a~~~~~~Ga~~I~~l--~p~~~~~~~~~-G~~~~~~~~~i~~I~----~~~~iPv~~k~r~g~~~~~~~~~a~GAd~V 104 (305)
T 2nv1_A 32 EQAKIAEEAGAVAVMAL--ERVPADIRAAG-GVARMADPTIVEEVM----NAVSIPVMAKARIGHIVEARVLEAMGVDYI 104 (305)
T ss_dssp HHHHHHHHTTCSEEEEC--CC-------CC-CCCCCCCHHHHHHHH----HHCSSCEEEEECTTCHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHcCCCEEEEc--CCCcchhhhcc-CcccCCCHHHHHHHH----HhCCCCEEecccccchHHHHHHHHCCCCEE
Confidence 56777888999999544 26554444333 666888887776664 446799999999854100
Q ss_pred ----------------------------ccHHHHHHHHHHHhhcCCccEEEEccCccc-------------------cCC
Q 017176 149 ----------------------------DSYNQLCDFIYKVSSLSPTRHFIIHSRKAL-------------------LNG 181 (376)
Q Consensus 149 ----------------------------~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~-------------------~~g 181 (376)
.+.++. .+.. +.|+|+|.++|.... ..|
T Consensus 105 ~~~~~l~~~~~~~~i~~~~~g~~v~~~~~~~~e~----~~a~-~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~g 179 (305)
T 2nv1_A 105 DESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEA----TRRI-AEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVA 179 (305)
T ss_dssp EECTTSCCSCSSCCCCGGGCSSCEEEEESSHHHH----HHHH-HTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccCCHHHHHHHHHHhccCCcEEEEeCCHHHH----HHHH-HCCCCEEEeccccCccchHHHHhhhhhhhccchhhcc
Confidence 011121 1122 467777777642100 000
Q ss_pred CCCCCCCC---CCcccHHHHHHHHhhCCCCeEE--EecCCCCHHHHHHHHHcCcCeeEEchHHhhCCc
Q 017176 182 ISPAENRT---IPPLKYEYYYALLRDFPDLTFT--LNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 182 ~~~~~~~~---~~~~~~~~v~~~~~~~~~ipVi--~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~ 244 (376)
....+... ..+..++.+.++.+. .++||+ ++|||.|++|+.++++.|||+|++||+++..+.
T Consensus 180 i~~~~~~~~~~~~~~~~~~i~~i~~~-~~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~~~ 246 (305)
T 2nv1_A 180 MSEDELMTEAKNLGAPYELLLQIKKD-GKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDN 246 (305)
T ss_dssp SCGGGHHHHHHHHTCCHHHHHHHHHH-TSCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSSC
T ss_pred ccchhhhcccccccccHHHHHHHHHh-cCCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcCCC
Confidence 00000000 012346778887765 489999 999999999999999999999999999997543
No 77
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.08 E-value=3.6e-09 Score=97.53 Aligned_cols=151 Identities=11% Similarity=0.078 Sum_probs=103.4
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhc-c--cCccE--
Q 017176 63 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAA-N--TNVPV-- 137 (376)
Q Consensus 63 ~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~-~--~~~pv-- 137 (376)
.+.|+++.=+-+++++. +.+.++|+|+|-+ |..++.+|+.+.++.+.... . +++++
T Consensus 74 ~~iPvi~~Ggi~~~~~~----~~~~~~Gad~V~l---------------g~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~ 134 (252)
T 1ka9_F 74 VFIPLTVGGGVRSLEDA----RKLLLSGADKVSV---------------NSAAVRRPELIRELADHFGAQAVVLAIDARW 134 (252)
T ss_dssp CCSCEEEESSCCSHHHH----HHHHHHTCSEEEE---------------CHHHHHCTHHHHHHHHHHCGGGEEEEEEEEE
T ss_pred CCCCEEEECCcCCHHHH----HHHHHcCCCEEEE---------------ChHHHhCcHHHHHHHHHcCCCcEEEEEEEec
Confidence 46788776444566543 3334468898855 55666778888888887642 1 22222
Q ss_pred -----EEEecCCCCCC--ccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeE
Q 017176 138 -----SVKCRIGVDDH--DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTF 210 (376)
Q Consensus 138 -----~vKiR~g~~~~--~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipV 210 (376)
.|++ -||.+. .+..+.++ .+++.|++.|.+|+++.. |.. ...+++.+.++++.. ++||
T Consensus 135 ~~g~~~v~~-~g~~~~~~~~~~e~~~----~~~~~G~~~i~~~~~~~~--g~~-------~g~~~~~i~~l~~~~-~ipv 199 (252)
T 1ka9_F 135 RGDFPEVHV-AGGRVPTGLHAVEWAV----KGVELGAGEILLTSMDRD--GTK-------EGYDLRLTRMVAEAV-GVPV 199 (252)
T ss_dssp ETTEEEEEE-TTTTEEEEEEHHHHHH----HHHHHTCCEEEEEETTTT--TTC-------SCCCHHHHHHHHHHC-SSCE
T ss_pred CCCCEEEEE-CCCccccCCcHHHHHH----HHHHcCCCEEEEecccCC--CCc-------CCCCHHHHHHHHHHc-CCCE
Confidence 4555 366652 12333332 334689999999965432 110 011388888888765 8999
Q ss_pred EEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchhh
Q 017176 211 TLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTL 247 (376)
Q Consensus 211 i~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~ 247 (376)
|++|||.+++|+.+++++|||+|++||+++.+||.+.
T Consensus 200 ia~GGI~~~~d~~~~~~~Gadgv~vgsal~~~~~~~~ 236 (252)
T 1ka9_F 200 IASGGAGRMEHFLEAFQAGAEAALAASVFHFGEIPIP 236 (252)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSCHH
T ss_pred EEeCCCCCHHHHHHHHHCCCHHHHHHHHHHcCCCCHH
Confidence 9999999999999999999999999999999998754
No 78
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.04 E-value=6.9e-10 Score=112.53 Aligned_cols=141 Identities=17% Similarity=0.145 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccHHHHH
Q 017176 77 DNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLC 155 (376)
Q Consensus 77 ~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~~~~ 155 (376)
+.+.+.++.+.++|+|.|++|++. | .++...++++++++.+ ++||.++.- .+.++.
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~-----------G-----~~~~~~e~i~~i~~~~p~~pvi~g~~------~t~e~a- 292 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAH-----------G-----HSRRVIETLEMIKADYPDLPVVAGNV------ATPEGT- 292 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSC-----------C-----SSHHHHHHHHHHHHHCTTSCEEEEEE------CSHHHH-
T ss_pred HhHHHHHHHHHHhCCCEEEEEecC-----------C-----chHHHHHHHHHHHHHCCCceEEeCCc------CCHHHH-
Confidence 345677888889999999998631 2 2456778899999888 789988521 223332
Q ss_pred HHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHH---HhhCCCCeEEEecCCCCHHHHHHHHHcCcCe
Q 017176 156 DFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYAL---LRDFPDLTFTLNGGINTVDEVNAALRKGAHH 232 (376)
Q Consensus 156 ~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~---~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~ 232 (376)
+.+.++|+|+|.|.++.....+....+....+. ...+.++ ++. .++|||++|||.+++|+.++++.|||+
T Consensus 293 ----~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~--~~~l~~v~~~~~~-~~ipvia~GGI~~~~di~kala~GAd~ 365 (494)
T 1vrd_A 293 ----EALIKAGADAVKVGVGPGSICTTRVVAGVGVPQ--LTAVMECSEVARK-YDVPIIADGGIRYSGDIVKALAAGAES 365 (494)
T ss_dssp ----HHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCH--HHHHHHHHHHHHT-TTCCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred ----HHHHHcCCCEEEEcCCCCccccccccCCCCccH--HHHHHHHHHHHhh-cCCCEEEECCcCCHHHHHHHHHcCCCE
Confidence 234579999999943211000000000001111 3333333 333 389999999999999999999999999
Q ss_pred eEEchHHhhCCchhh
Q 017176 233 VMVGRAAYQNPWYTL 247 (376)
Q Consensus 233 VmiGRa~l~~P~lf~ 247 (376)
|++||+++.+|.+..
T Consensus 366 V~iGr~~l~~~e~~~ 380 (494)
T 1vrd_A 366 VMVGSIFAGTEEAPG 380 (494)
T ss_dssp EEESHHHHTBTTSSS
T ss_pred EEECHHHhcCCcCCc
Confidence 999999999998753
No 79
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=99.03 E-value=9.2e-09 Score=100.94 Aligned_cols=142 Identities=10% Similarity=0.102 Sum_probs=112.9
Q ss_pred EEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCC
Q 017176 67 IVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGV 145 (376)
Q Consensus 67 ~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~ 145 (376)
+...+.+.+++.|.++|+++.+.||+.|+|++|| +++...+++++||+.+ ++++.++..-+|
T Consensus 139 ~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~-----------------~~~~~~e~v~avr~a~gd~~l~vD~n~~~ 201 (384)
T 2pgw_A 139 YFYFLQGETAEELARDAAVGHAQGERVFYLKVGR-----------------GEKLDLEITAAVRGEIGDARLRLDANEGW 201 (384)
T ss_dssp BCEECCCSSHHHHHHHHHHHHHTTCCEEEEECCS-----------------CHHHHHHHHHHHHTTSTTCEEEEECTTCC
T ss_pred EEEECCCCCHHHHHHHHHHHHHcCCCEEEECcCC-----------------CHHHHHHHHHHHHHHcCCcEEEEecCCCC
Confidence 3334445789999999999999999999998774 5788899999999988 588888887777
Q ss_pred CCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHH
Q 017176 146 DDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAA 225 (376)
Q Consensus 146 ~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~ 225 (376)
+ .++.+++ .+.+++.|+++|. .. +++.+++..+++++.. ++||++++.+.++++++++
T Consensus 202 ~----~~~a~~~-~~~l~~~~i~~iE----qP------------~~~~~~~~~~~l~~~~-~iPI~~de~i~~~~~~~~~ 259 (384)
T 2pgw_A 202 S----VHDAINM-CRKLEKYDIEFIE----QP------------TVSWSIPAMAHVREKV-GIPIVADQAAFTLYDVYEI 259 (384)
T ss_dssp C----HHHHHHH-HHHHGGGCCSEEE----CC------------SCTTCHHHHHHHHHHC-SSCEEESTTCCSHHHHHHH
T ss_pred C----HHHHHHH-HHHHHhcCCCEEe----CC------------CChhhHHHHHHHHhhC-CCCEEEeCCcCCHHHHHHH
Confidence 5 3455554 4567789999876 10 1223477788887765 8999999999999999999
Q ss_pred HH-cCcCeeEEchHHhhCCchhh
Q 017176 226 LR-KGAHHVMVGRAAYQNPWYTL 247 (376)
Q Consensus 226 l~-~Gad~VmiGRa~l~~P~lf~ 247 (376)
++ ..||+|++..+.++.++-+.
T Consensus 260 i~~~~~d~v~ik~~~~GGit~~~ 282 (384)
T 2pgw_A 260 CRQRAADMICIGPREIGGIQPMM 282 (384)
T ss_dssp HHTTCCSEEEECHHHHTSHHHHH
T ss_pred HHcCCCCEEEEcchhhCCHHHHH
Confidence 98 67999999999888887643
No 80
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=99.03 E-value=6.3e-08 Score=88.50 Aligned_cols=208 Identities=13% Similarity=0.126 Sum_probs=129.4
Q ss_pred CCCeecCCcEEEccCCCCChHHH-HHHHHHhCCCcEEEecceeecccccccchhhhhhcc-CCCCCCEEEEecC-CCHHH
Q 017176 2 VARQYLPPWFSVAPMMDWTDNHY-RTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAF-SPEQHPIVLQIGG-SNLDN 78 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td~~~-r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~-~~~~~p~~vQL~g-~~~~~ 78 (376)
|++.++..|+++- -+.+.+... +...++. |+.++..-+=.. .+.. ......+++. .+.+..+..|-.| .+.++
T Consensus 13 i~~~~f~SRl~~G-tgky~~~~~~~~a~~as-g~e~vtva~rR~-~~~~-~~~~~~~~~~i~~~~~~~lpNTag~~ta~e 88 (265)
T 1wv2_A 13 IAGRTYGSRLLVG-TGKYKDLDETRRAIEAS-GAEIVTVAVRRT-NIGQ-NPDEPNLLDVIPPDRYTILPNTAGCYDAVE 88 (265)
T ss_dssp ETTEEESCCEEEC-CSCSSSHHHHHHHHHHS-CCSEEEEEGGGC-CC--------------CTTTSEEEEECTTCCSHHH
T ss_pred ECCEEeecceEEe-cCCCCCHHHHHHHHHHh-CCCeEEEEEEee-cccc-CCCcchHHhhhhhcCCEECCcCCCCCCHHH
Confidence 6788999999885 344666544 4445555 466653333222 1110 1112333332 2335567777766 47899
Q ss_pred HHHHHHHHHH-C-CCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHH
Q 017176 79 LAKATELANA-Y-NYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCD 156 (376)
Q Consensus 79 ~~~aa~~~~~-~-G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~ 156 (376)
-+..|+++.+ + |-++|-|-. .... -.++.|+....+..+.+.+. ++.+..-+. ++ ..
T Consensus 89 Av~~a~lare~~~~~~~iKlEv-------~~d~---~~llpD~~~tv~aa~~L~~~-Gf~Vlpy~~---dd---~~---- 147 (265)
T 1wv2_A 89 AVRTCRLARELLDGHNLVKLEV-------LADQ---KTLFPNVVETLKAAEQLVKD-GFDVMVYTS---DD---PI---- 147 (265)
T ss_dssp HHHHHHHHHTTTTSCCEEEECC-------BSCT---TTCCBCHHHHHHHHHHHHTT-TCEEEEEEC---SC---HH----
T ss_pred HHHHHHHHHHHcCCCCeEEEEe-------ecCc---cccCcCHHHHHHHHHHHHHC-CCEEEEEeC---CC---HH----
Confidence 9999999998 5 567887742 2111 23567888777777776543 443332111 22 21
Q ss_pred HHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEc
Q 017176 157 FIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 236 (376)
Q Consensus 157 ~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiG 236 (376)
+++.+++.|+++|..++..- |.+ ....+++.+..+++. +++|||+.|||.+++|+..+++.|||+|++|
T Consensus 148 -~akrl~~~G~~aVmPlg~pI---GsG------~Gi~~~~lI~~I~e~-~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVg 216 (265)
T 1wv2_A 148 -IARQLAEIGCIAVMPLAGLI---GSG------LGICNPYNLRIILEE-AKVPVLVDAGVGTASDAAIAMELGCEAVLMN 216 (265)
T ss_dssp -HHHHHHHSCCSEEEECSSST---TCC------CCCSCHHHHHHHHHH-CSSCBEEESCCCSHHHHHHHHHHTCSEEEES
T ss_pred -HHHHHHHhCCCEEEeCCccC---CCC------CCcCCHHHHHHHHhc-CCCCEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 24556789999998877531 111 011247888888875 5999999999999999999999999999999
Q ss_pred hHHhh--CCch
Q 017176 237 RAAYQ--NPWY 245 (376)
Q Consensus 237 Ra~l~--~P~l 245 (376)
+++.. ||..
T Consensus 217 SAI~~a~dP~~ 227 (265)
T 1wv2_A 217 TAIAHAKDPVM 227 (265)
T ss_dssp HHHHTSSSHHH
T ss_pred hHHhCCCCHHH
Confidence 99964 4544
No 81
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.01 E-value=4.1e-08 Score=89.72 Aligned_cols=76 Identities=17% Similarity=0.015 Sum_probs=57.3
Q ss_pred hhcCCccEEEE--ccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHH
Q 017176 162 SSLSPTRHFII--HSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAA 239 (376)
Q Consensus 162 ~e~~Gvd~I~v--h~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~ 239 (376)
+++.|+|+|.+ ++.+...+. ...+++.+.++++. ++|||++|||.|++|+.++++.|||+|++|+++
T Consensus 145 a~~~Gad~Ig~~~~g~t~~~~~---------~~~~~~~i~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal 213 (232)
T 3igs_A 145 CQRLGADIIGTTMSGYTTPDTP---------EEPDLPLVKALHDA--GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAI 213 (232)
T ss_dssp HHHTTCSEEECTTTTSSSSSCC---------SSCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHhCCCCEEEEcCccCCCCCCC---------CCCCHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHh
Confidence 45789999954 444431110 12248888888764 899999999999999999999999999999777
Q ss_pred hhCCchhhHh
Q 017176 240 YQNPWYTLGH 249 (376)
Q Consensus 240 l~~P~lf~~~ 249 (376)
+ +|+...+.
T Consensus 214 ~-~p~~~~~~ 222 (232)
T 3igs_A 214 T-RLEHICGW 222 (232)
T ss_dssp H-CHHHHHHH
T ss_pred c-CHHHHHHH
Confidence 6 68765443
No 82
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.98 E-value=1.8e-09 Score=99.49 Aligned_cols=98 Identities=15% Similarity=0.073 Sum_probs=73.9
Q ss_pred cEEEEecCCCCCC-ccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEec
Q 017176 136 PVSVKCRIGVDDH-DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG 214 (376)
Q Consensus 136 pv~vKiR~g~~~~-~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nG 214 (376)
.+.||+|.+++.. .+..++ ++.+++.|+++|+++..+....+. ..+++.+.++++.+ ++||+++|
T Consensus 21 ~~~v~~~~~~~~~~~~~~~~----a~~~~~~G~~~i~v~d~~~~~~~~---------~~~~~~i~~i~~~~-~ipvi~~G 86 (247)
T 3tdn_A 21 EFMVFTYSGKKNTGILLRDW----VVEVEKRGAGEILLTSIDRDGTKS---------GYDTEMIRFVRPLT-TLPIIASG 86 (247)
T ss_dssp EEEEEETTTTEEEEEEHHHH----HHHHHHTTCSEEEEEETTTTTCSS---------CCCHHHHHHHGGGC-CSCEEEES
T ss_pred cEEEEEcCCeecCCCCHHHH----HHHHHHcCCCEEEEEecCcccCCC---------cccHHHHHHHHHhC-CCCEEEeC
Confidence 3678899544321 234444 344568999999998765321111 12378888888765 99999999
Q ss_pred CCCCHHHHHHHHHcCcCeeEEchHHhhCCchhh
Q 017176 215 GINTVDEVNAALRKGAHHVMVGRAAYQNPWYTL 247 (376)
Q Consensus 215 gI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~ 247 (376)
||.|+++++++++.|||+|++||+++.||+++.
T Consensus 87 gi~~~~~~~~~l~~Gad~V~ig~~~l~dp~~~~ 119 (247)
T 3tdn_A 87 GAGKMEHFLEAFLRGADKVSINTAAVENPSLIT 119 (247)
T ss_dssp CCCSHHHHHHHHHTTCSEECCSHHHHHCTHHHH
T ss_pred CCCCHHHHHHHHHcCCCeeehhhHHhhChHHHH
Confidence 999999999999999999999999999999853
No 83
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=98.98 E-value=4.7e-09 Score=95.80 Aligned_cols=128 Identities=13% Similarity=0.062 Sum_probs=88.8
Q ss_pred HHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHh
Q 017176 83 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVS 162 (376)
Q Consensus 83 a~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~ 162 (376)
+..+.++|+|.|-++..+- .+|+.+.++++.+++. +.++.+.+. +.++.. .+
T Consensus 94 i~~~~~aGad~I~l~~~~~---------------~~p~~l~~~i~~~~~~-g~~v~~~v~-------t~eea~-----~a 145 (229)
T 3q58_A 94 VDALAQAGADIIAFDASFR---------------SRPVDIDSLLTRIRLH-GLLAMADCS-------TVNEGI-----SC 145 (229)
T ss_dssp HHHHHHHTCSEEEEECCSS---------------CCSSCHHHHHHHHHHT-TCEEEEECS-------SHHHHH-----HH
T ss_pred HHHHHHcCCCEEEECcccc---------------CChHHHHHHHHHHHHC-CCEEEEecC-------CHHHHH-----HH
Confidence 3446678999998875421 2344567777777653 677776432 344432 24
Q ss_pred hcCCccEEEE--ccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHh
Q 017176 163 SLSPTRHFII--HSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAY 240 (376)
Q Consensus 163 e~~Gvd~I~v--h~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l 240 (376)
++.|+|+|.+ |+.+.... .....++.+.++++. ++|||++|||.|++|+.++++.|||+|++|+++.
T Consensus 146 ~~~Gad~Ig~~~~g~t~~~~---------~~~~~~~li~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~ 214 (229)
T 3q58_A 146 HQKGIEFIGTTLSGYTGPIT---------PVEPDLAMVTQLSHA--GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAIT 214 (229)
T ss_dssp HHTTCSEEECTTTTSSSSCC---------CSSCCHHHHHHHHTT--TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred HhCCCCEEEecCccCCCCCc---------CCCCCHHHHHHHHHc--CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhc
Confidence 5799999954 55443210 112247888888764 8999999999999999999999999999997665
Q ss_pred hCCchhhHhh
Q 017176 241 QNPWYTLGHV 250 (376)
Q Consensus 241 ~~P~lf~~~~ 250 (376)
+||.+.+.+
T Consensus 215 -~p~~~~~~f 223 (229)
T 3q58_A 215 -RIEHICQWF 223 (229)
T ss_dssp -CHHHHHHHH
T ss_pred -ChHHHHHHH
Confidence 688765443
No 84
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=98.92 E-value=3.6e-08 Score=91.81 Aligned_cols=205 Identities=13% Similarity=0.079 Sum_probs=114.0
Q ss_pred CCCeecCCcEEEccCCCCChHHHHHHHHHhCCCcEEEecceeecccccccchhhhhhccC-CCCCCEEEEecC-CCHHHH
Q 017176 2 VARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFS-PEQHPIVLQIGG-SNLDNL 79 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~-~~~~p~~vQL~g-~~~~~~ 79 (376)
|++++|+||++++.-..-+-..+.....+. |++++-..+=.++.. ......+++.- ....+++.|..+ .++++.
T Consensus 6 i~~~~~~~~~~~~t~g~p~~~~~~~~l~~~-Gad~ielg~pr~~~~---g~~~~~~~~~l~~~~~~~~pn~~~~~~~~~~ 81 (264)
T 1xm3_A 6 IGGKSFQSRLLLGTGKYPSFDIQKEAVAVS-ESDILTFAVRRMNIF---EASQPNFLEQLDLSKYTLLPNTAGASTAEEA 81 (264)
T ss_dssp ETTEEESCCEEEECSCSSCHHHHHHHHHHH-TCSEEEEETTSSTTC----------CTTCCGGGSEEEEECTTCSSHHHH
T ss_pred ECCEEecCCCEEEecCCCCHHHHHHHHHHc-CCeEEEEcccccccC---CCCHHHHHHHHHhcCCeEcCCccccCCHHHH
Confidence 689999999999954443333444444444 477774333111110 12223333222 224566678876 678877
Q ss_pred HHHHHHHHHC-CCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHHHHHH
Q 017176 80 AKATELANAY-NYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCD 156 (376)
Q Consensus 80 ~~aa~~~~~~-G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~~~~~ 156 (376)
...++.+.++ |.+.|.++.- |. .. .+..+ ..++++.+++.+ ++.+..-+ .. +.+++
T Consensus 82 ~~f~~~a~~agg~~~i~l~i~-~d------~~---~~~~e---~~~~~~~a~~~~~~g~~vi~~~---~~---~~~~a-- 140 (264)
T 1xm3_A 82 VRIARLAKASGLCDMIKVEVI-GC------SR---SLLPD---PVETLKASEQLLEEGFIVLPYT---SD---DVVLA-- 140 (264)
T ss_dssp HHHHHHHHHTTCCSSEEECCB-CC------TT---TCCBC---HHHHHHHHHHHHHTTCCEEEEE---CS---CHHHH--
T ss_pred HHHHHHHHHcCCCCeEEEeec-CC------Cc---ccccc---hHHHHHHHHHHHCCCeEEEEEc---CC---CHHHH--
Confidence 7777878877 4567776641 11 00 00122 334455554432 33332111 11 22222
Q ss_pred HHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEc
Q 017176 157 FIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 236 (376)
Q Consensus 157 ~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiG 236 (376)
+.+++.|+|+|...+... |.. ... ..++.+..+++. .++||++-|||.+++|+.++++.|||+|.+|
T Consensus 141 ---~~~~~~gad~v~~~~~~~---Gt~----~~~--~~~~~l~~i~~~-~~iPviv~gGI~t~eda~~~~~~GAdgViVG 207 (264)
T 1xm3_A 141 ---RKLEELGVHAIMPGASPI---GSG----QGI--LNPLNLSFIIEQ-AKVPVIVDAGIGSPKDAAYAMELGADGVLLN 207 (264)
T ss_dssp ---HHHHHHTCSCBEECSSST---TCC----CCC--SCHHHHHHHHHH-CSSCBEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred ---HHHHHhCCCEEEECCccc---CCC----CCC--CCHHHHHHHHhc-CCCCEEEEeCCCCHHHHHHHHHcCCCEEEEc
Confidence 223467899983323221 110 001 125566676664 5999999999999999999999999999999
Q ss_pred hHHhhCCc
Q 017176 237 RAAYQNPW 244 (376)
Q Consensus 237 Ra~l~~P~ 244 (376)
++++..+.
T Consensus 208 SAi~~a~d 215 (264)
T 1xm3_A 208 TAVSGADD 215 (264)
T ss_dssp HHHHTSSS
T ss_pred HHHhCCCC
Confidence 99886554
No 85
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=98.87 E-value=2.5e-08 Score=110.44 Aligned_cols=219 Identities=13% Similarity=0.069 Sum_probs=123.3
Q ss_pred ecCCcEEEccCCCC--Ch---HHHHHHHHHhCCCcEEEecceeeccccc-----ccchh---hhhhccCC--CCCCEEEE
Q 017176 6 YLPPWFSVAPMMDW--TD---NHYRTLARLISKHAWLYTEMLAAETIIY-----QQGNL---DRFLAFSP--EQHPIVLQ 70 (376)
Q Consensus 6 ~l~nri~lAPM~~~--td---~~~r~~~~~~Gg~gl~~te~v~~~~~~~-----~~~~~---~~~~~~~~--~~~p~~vQ 70 (376)
.+..||+++||++. |. ..+...+.+.|+.+.+-....+++.+.. .+.+. ........ .....+.|
T Consensus 865 ~I~~Pfii~aMS~GslS~ea~~aLA~Aas~aGg~~~tGeGg~~pe~~~~eir~~~~~~~~~~p~~~~~~nG~~~~~~I~Q 944 (1520)
T 1ofd_A 865 SIVKRFCTGGMSLGALSREAHETLAIAMNRLGAKSNSGEGGEDVVRYLTLDDVDSEGNSPTLPHLHGLQNGDTANSAIKQ 944 (1520)
T ss_dssp HHHTTEECCCBCTTTSCHHHHHHHHHHHHHHTCBCEECTTCCCGGGGSCCCCCCTTSCCTTSTTCCSCCTTCCCCCSEEE
T ss_pred cccCceEecCcCcccccHHHHHHHHHHHHHcCCceEeCCCCCCHHHHHhhhccccccccccccccccccCcchHHHHHHH
Confidence 46779999999953 32 2455556788876555433343332210 00000 00001111 12346888
Q ss_pred ec----CCCHHHHHHHHHHHHHCCCCEEEecCCC----------CCcccc------CCCCccccc--------cCCHHHH
Q 017176 71 IG----GSNLDNLAKATELANAYNYDEINLNCGC----------PSPKVA------GHGCFGVSL--------MLDPKFV 122 (376)
Q Consensus 71 L~----g~~~~~~~~aa~~~~~~G~d~IeiN~gc----------P~~~v~------r~g~yG~~l--------~~~~~~~ 122 (376)
+. |.+.+. +.. .|.|+|.++- |..++. |.-..|..+ ..+++.+
T Consensus 945 l~sg~FGVn~~~-------l~~--ad~IeIKi~QGAKpG~GG~Lp~~kV~~~iA~~R~~~~Gv~lisP~~~~d~~s~edl 1015 (1520)
T 1ofd_A 945 IASGRFGVTPEY-------LMS--GKQLEIKMAQGAKPGEGGQLPGKKVSEYIAMLRRSKPGVTLISPPPHHDIYSIEDL 1015 (1520)
T ss_dssp ECTTCTTCCHHH-------HHH--CSEEEEECCCTTSTTSCCEECGGGCCHHHHHHHTSCTTCCEECCSSCTTCSSHHHH
T ss_pred hcCCCCccChhh-------ccc--hHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHcCCCCCCCeeCCCCCcCcCCHHHH
Confidence 83 445442 122 5889987631 111111 000112211 1346778
Q ss_pred HHHHHHHhccc-CccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCC--CCCCCCCcccHHHHH
Q 017176 123 GEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISP--AENRTIPPLKYEYYY 199 (376)
Q Consensus 123 ~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~--~~~~~~~~~~~~~v~ 199 (376)
.++++.+++.. ++||.||+-.+.. +.+. ++.+.++|+|+|+|+|.....++... .....++. ...+.
T Consensus 1016 ~~~I~~Lk~~~~~~PV~VKlv~~~g----i~~~----A~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt--~~aL~ 1085 (1520)
T 1ofd_A 1016 AQLIYDLHQINPEAQVSVKLVAEIG----IGTI----AAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPW--ELGVT 1085 (1520)
T ss_dssp HHHHHHHHHHCTTSEEEEEEECSTT----HHHH----HHHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCH--HHHHH
T ss_pred HHHHHHHHHhCCCCCEEEEecCCCC----hHHH----HHHHHHcCCCEEEEeCCCCccCCCcchhhcCCchhH--HHHHH
Confidence 89999999887 8999999876421 1122 33455799999999765421111000 00001111 23344
Q ss_pred HHHhhC------CCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCC
Q 017176 200 ALLRDF------PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 243 (376)
Q Consensus 200 ~~~~~~------~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P 243 (376)
++.+.. .++|||+.|||.|+.|+.+++..|||+|++||++|...
T Consensus 1086 ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~al 1135 (1520)
T 1ofd_A 1086 EVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAE 1135 (1520)
T ss_dssp HHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHHT
T ss_pred HHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHHH
Confidence 433211 26999999999999999999999999999999998754
No 86
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.85 E-value=3.5e-08 Score=99.79 Aligned_cols=132 Identities=15% Similarity=0.101 Sum_probs=86.6
Q ss_pred HHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccHHHHHHHH
Q 017176 80 AKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFI 158 (376)
Q Consensus 80 ~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~~~~~~i 158 (376)
.+.++.+.++|+|.|.++.. . + +.+...+.++.+++.+ ++|+..+ ++. +.+..
T Consensus 235 ~~~a~~l~~~G~d~ivi~~a------~--g--------~~~~~~~~i~~l~~~~p~~pvi~G---~v~---t~~~a---- 288 (491)
T 1zfj_A 235 FERAEALFEAGADAIVIDTA------H--G--------HSAGVLRKIAEIRAHFPNRTLIAG---NIA---TAEGA---- 288 (491)
T ss_dssp HHHHHHHHHHTCSEEEECCS------C--T--------TCHHHHHHHHHHHHHCSSSCEEEE---EEC---SHHHH----
T ss_pred HHHHHHHHHcCCCeEEEeee------c--C--------cchhHHHHHHHHHHHCCCCcEeCC---Ccc---CHHHH----
Confidence 35566677789999988741 1 1 2234567788888877 7888754 222 22222
Q ss_pred HHHhhcCCccEEEEccC------ccccCCCCCCCCCCCCcccHHHHHHHHhh--CCCCeEEEecCCCCHHHHHHHHHcCc
Q 017176 159 YKVSSLSPTRHFIIHSR------KALLNGISPAENRTIPPLKYEYYYALLRD--FPDLTFTLNGGINTVDEVNAALRKGA 230 (376)
Q Consensus 159 ~~~~e~~Gvd~I~vh~r------~~~~~g~~~~~~~~~~~~~~~~v~~~~~~--~~~ipVi~nGgI~s~~da~~~l~~Ga 230 (376)
+.+.++|+|.|.|..+ +....+.. ....+.+.++... ..++|||+.|||.+++|+.++++.||
T Consensus 289 -~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~--------~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~GA 359 (491)
T 1zfj_A 289 -RALYDAGVDVVKVGIGPGSICTTRVVAGVG--------VPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGG 359 (491)
T ss_dssp -HHHHHTTCSEEEECSSCCTTBCHHHHTCCC--------CCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTC
T ss_pred -HHHHHcCCCEEEECccCCcceEEeeecCCC--------CCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHcCC
Confidence 2234699999998521 11111111 1124555554431 13899999999999999999999999
Q ss_pred CeeEEchHHhhCCchh
Q 017176 231 HHVMVGRAAYQNPWYT 246 (376)
Q Consensus 231 d~VmiGRa~l~~P~lf 246 (376)
|+|++||+++..++..
T Consensus 360 ~~v~vG~~~~~~~e~~ 375 (491)
T 1zfj_A 360 NAVMLGSMFAGTDEAP 375 (491)
T ss_dssp SEEEESTTTTTBSSCC
T ss_pred cceeeCHHhhCCCcCc
Confidence 9999999999876643
No 87
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=98.84 E-value=1e-08 Score=117.51 Aligned_cols=202 Identities=10% Similarity=0.036 Sum_probs=129.5
Q ss_pred CCcEEEccCC-CCChHHHHHHHHHhCCCcEEEe-cceeecccccccchhhhhhccCCCCCCEEEEecCCCHHH---HHHH
Q 017176 8 PPWFSVAPMM-DWTDNHYRTLARLISKHAWLYT-EMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDN---LAKA 82 (376)
Q Consensus 8 ~nri~lAPM~-~~td~~~r~~~~~~Gg~gl~~t-e~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~~~~---~~~a 82 (376)
+.||++|||+ ..++..+...+.++||.|.+.. .+.+.+.+-....+..+ ..+.+.|+++++.-.+|.. ..+.
T Consensus 589 ~~PIi~~gM~~~~~~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~~~~---~t~~~~~~gvN~~~~~~~~~~~~~~~ 665 (2051)
T 2uv8_G 589 RPPLLVPGMTPCTVSPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDSVVS---QIEKGSTFGINLIYVNPFMLQWGIPL 665 (2051)
T ss_dssp SCSEEECCCHHHHTCHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHHHHH---HSCTTCCEEEEEETTCTTHHHHHHHH
T ss_pred ccceecCCCccccccHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHHHHH---hcCCCCceEEEEeecChhhhhhhHHH
Confidence 3699999998 4559999999999999888744 33334433222222222 2345689999987655431 1266
Q ss_pred HHHHHHCCCCE--EEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHH
Q 017176 83 TELANAYNYDE--INLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYK 160 (376)
Q Consensus 83 a~~~~~~G~d~--IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~ 160 (376)
.+.+.+.|+.. |.+..|-|.. +...++++.+ ++++..... | .. ..++. +.
T Consensus 666 ~~~~~~~gv~i~~v~~~ag~p~~----------------~~~~~~i~~l----G~~vi~~~~-~-----~~-~a~~~-~~ 717 (2051)
T 2uv8_G 666 IKELRSKGYPIQFLTIGAGVPSL----------------EVASEYIETL----GLKYLGLKP-G-----SI-DAISQ-VI 717 (2051)
T ss_dssp HHHHHHTTCSEEEEEEESSCCCH----------------HHHHHHHHHS----CCSCEEECC-C-----SH-HHHHH-HH
T ss_pred HHHHHHcCCCcceEEecCCCCch----------------hhHHHHHHHc----CCEEEEecC-c-----hH-HHHHH-HH
Confidence 67777888766 8887776642 2344455544 666544211 1 11 11222 22
Q ss_pred HhhcCCccEE---EEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHH-----------
Q 017176 161 VSSLSPTRHF---IIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL----------- 226 (376)
Q Consensus 161 ~~e~~Gvd~I---~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l----------- 226 (376)
..+++|+|++ .+.|..+ +|+.+. ..+....+..+.++++. ++||||+.|||-|++++..+|
T Consensus 718 ~~~~~g~d~~ii~~~~G~ea--GGH~g~--~d~~~~~l~l~~~v~~~-~~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~ 792 (2051)
T 2uv8_G 718 NIAKAHPNFPIALQWTGGRG--GGHHSF--EDAHTPMLQMYSKIRRH-PNIMLIFGSGFGSADDTYPYLTGEWSTKFDYP 792 (2051)
T ss_dssp HHHHHSTTSCEEEEECCSSC--SEECCS--CCSSHHHHHHHHHHTTC-TTBCCEEESSCCSHHHHTHHHHTCGGGTTTCC
T ss_pred HHHHhCCCceeEEEEEccCc--CCCCCc--ccccccHHHHHHHHHhc-CCceEEEeCCCCCHHHHHHHHccccccccCcc
Confidence 3457899993 4556553 333221 12233334556777665 599999999999999999999
Q ss_pred HcCcCeeEEchHHhhCCch
Q 017176 227 RKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 227 ~~Gad~VmiGRa~l~~P~l 245 (376)
..|||||+||+.++.-...
T Consensus 793 ~lgadGv~~GTrf~~t~Ea 811 (2051)
T 2uv8_G 793 PMPFDGFLFGSRVMIAKEV 811 (2051)
T ss_dssp CCCCSCEECSGGGTTSTTS
T ss_pred CCCCceeeechHHHhCccc
Confidence 6899999999999987664
No 88
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=98.83 E-value=4.5e-08 Score=108.23 Aligned_cols=114 Identities=13% Similarity=0.095 Sum_probs=77.2
Q ss_pred CHHHHHHHHHHHhccc-CccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCC---CCCCCCcc
Q 017176 118 DPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPA---ENRTIPPL 193 (376)
Q Consensus 118 ~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~---~~~~~~~~ 193 (376)
+++.+.++++.+++.. ++||.||+-.+.. +.+. ++.+.++|+|+|+|+|.....++ ++. ....++
T Consensus 976 s~edl~~~I~~Lk~~~~~~PV~VKlv~~~g----i~~~----A~~a~~AGAD~IvVsG~eGGTga-sp~~~~~~~G~P-- 1044 (1479)
T 1ea0_A 976 SIEDLAQLIYDLKQINPDAKVTVKLVSRSG----IGTI----AAGVAKANADIILISGNSGGTGA-SPQTSIKFAGLP-- 1044 (1479)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEEEECCTT----HHHH----HHHHHHTTCSEEEEECTTCCCSS-EETTHHHHSCCC--
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEEEcCCCC----hHHH----HHHHHHcCCcEEEEcCCCCCCCC-CchhhhcCCchh--
Confidence 4677889999999887 8899999876421 1122 33456799999999765421111 000 000111
Q ss_pred cHHHHHHHHhh---C---CCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhC
Q 017176 194 KYEYYYALLRD---F---PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 242 (376)
Q Consensus 194 ~~~~v~~~~~~---~---~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 242 (376)
....+.++.+. . .++|||+.|||.|+.|+.+++..|||+|++||++|..
T Consensus 1045 t~~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~a 1099 (1479)
T 1ea0_A 1045 WEMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLIA 1099 (1479)
T ss_dssp HHHHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHHHH
Confidence 12344444332 1 2799999999999999999999999999999999863
No 89
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=98.83 E-value=3.8e-08 Score=92.80 Aligned_cols=202 Identities=12% Similarity=0.078 Sum_probs=130.8
Q ss_pred CCChHHHHHHHHHhCCCcEEEecce--eecccccccc---hhhhhhc----c-CCCCCCEEEEe---cCCCHHHHHHHHH
Q 017176 18 DWTDNHYRTLARLISKHAWLYTEML--AAETIIYQQG---NLDRFLA----F-SPEQHPIVLQI---GGSNLDNLAKATE 84 (376)
Q Consensus 18 ~~td~~~r~~~~~~Gg~gl~~te~v--~~~~~~~~~~---~~~~~~~----~-~~~~~p~~vQL---~g~~~~~~~~aa~ 84 (376)
+.-|.....++.+.| +..+++.-. +...+.+.+. ....++. + ...+.|+++.+ +|.+++...+.++
T Consensus 23 ~a~D~~sA~~~~~aG-~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~~v~ 101 (295)
T 1xg4_A 23 GTINANHALLAQRAG-YQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVK 101 (295)
T ss_dssp ECSSHHHHHHHHHTT-CSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCSSSSHHHHHHHHH
T ss_pred cCcCHHHHHHHHHcC-CCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCcccCCCHHHHHHHHH
Confidence 566888888887776 776665533 2212222221 1111110 0 11346999999 7888999999999
Q ss_pred HHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhc
Q 017176 85 LANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSL 164 (376)
Q Consensus 85 ~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~ 164 (376)
++.++|+++|.|.-+|.. +++.+.. |..|....+.+..|-.++....+.++.|.-|..-.-...++++++. ++.+++
T Consensus 102 ~l~~aGa~gv~iEd~~~~-k~cgH~~-gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~r-a~ay~e 178 (295)
T 1xg4_A 102 SMIKAGAAGLHIEDQVGA-KRSGHRP-NKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIER-AQAYVE 178 (295)
T ss_dssp HHHHHTCSEEEEECBCSS-CCCTTSS-SCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHH-HHHHHH
T ss_pred HHHHcCCeEEEECCCCCC-cccCCCC-CCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHHH-HHHHHH
Confidence 999999999999999853 3444433 4446655555555555544444667788878631111224566654 456778
Q ss_pred CCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCC--CCHH-HHHHHHHcCcCeeEEchHHhh
Q 017176 165 SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGI--NTVD-EVNAALRKGAHHVMVGRAAYQ 241 (376)
Q Consensus 165 ~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI--~s~~-da~~~l~~Gad~VmiGRa~l~ 241 (376)
+|+|.|.+|+.. .++.+.++.+.+ ++|+++|.-. .++. ...++-+.|++.|++|.+++.
T Consensus 179 AGAd~i~~e~~~-----------------~~~~~~~i~~~~-~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~~ 240 (295)
T 1xg4_A 179 AGAEMLFPEAIT-----------------ELAMYRQFADAV-QVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFR 240 (295)
T ss_dssp TTCSEEEETTCC-----------------SHHHHHHHHHHH-CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHHHH
T ss_pred cCCCEEEEeCCC-----------------CHHHHHHHHHHc-CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHHHH
Confidence 999999999853 156677777775 7999998765 2332 334444589999999998764
No 90
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.77 E-value=3.5e-07 Score=91.74 Aligned_cols=131 Identities=17% Similarity=0.192 Sum_probs=85.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccHHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQ 153 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~~ 153 (376)
.++.+.++.. +.++|+|.|-|... + | +.+.+.+.++.+++.. +++|.+- ++ .+.+.
T Consensus 279 ~~d~~eR~~a-Lv~AGvD~iviD~a--------h---G-----hs~~v~~~i~~ik~~~p~~~viaG---NV---aT~e~ 335 (556)
T 4af0_A 279 RPGDKDRLKL-LAEAGLDVVVLDSS--------Q---G-----NSVYQIEFIKWIKQTYPKIDVIAG---NV---VTREQ 335 (556)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECCS--------C---C-----CSHHHHHHHHHHHHHCTTSEEEEE---EE---CSHHH
T ss_pred CccHHHHHHH-HHhcCCcEEEEecc--------c---c-----ccHHHHHHHHHHHhhCCcceEEec---cc---cCHHH
Confidence 4555555544 55789999988532 1 2 2356788899998865 5677663 11 22322
Q ss_pred HHHHHHHHhhcCCccEEEEccC------ccccCCCCCCCCCCCCcccHHHHH---HHHhhCCCCeEEEecCCCCHHHHHH
Q 017176 154 LCDFIYKVSSLSPTRHFIIHSR------KALLNGISPAENRTIPPLKYEYYY---ALLRDFPDLTFTLNGGINTVDEVNA 224 (376)
Q Consensus 154 ~~~~i~~~~e~~Gvd~I~vh~r------~~~~~g~~~~~~~~~~~~~~~~v~---~~~~~~~~ipVi~nGgI~s~~da~~ 224 (376)
. + .+.++|+|.|.|--+ |+...|.+ .|+ ...+. +.++++ ++|||+.|||.+.-|+.+
T Consensus 336 a-~----~Li~aGAD~vkVGiGpGSiCtTr~v~GvG------~PQ--~tAi~~~a~~a~~~-~vpvIADGGI~~sGDi~K 401 (556)
T 4af0_A 336 A-A----QLIAAGADGLRIGMGSGSICITQEVMAVG------RPQ--GTAVYAVAEFASRF-GIPCIADGGIGNIGHIAK 401 (556)
T ss_dssp H-H----HHHHHTCSEEEECSSCSTTBCCTTTCCSC------CCH--HHHHHHHHHHHGGG-TCCEEEESCCCSHHHHHH
T ss_pred H-H----HHHHcCCCEEeecCCCCcccccccccCCC------CcH--HHHHHHHHHHHHHc-CCCEEecCCcCcchHHHH
Confidence 2 1 233689999998422 22233322 122 33333 334444 799999999999999999
Q ss_pred HHHcCcCeeEEchHHhhC
Q 017176 225 ALRKGAHHVMVGRAAYQN 242 (376)
Q Consensus 225 ~l~~Gad~VmiGRa~l~~ 242 (376)
+|..|||.||+|.-|-+.
T Consensus 402 AlaaGAd~VMlGsllAGt 419 (556)
T 4af0_A 402 ALALGASAVMMGGLLAGT 419 (556)
T ss_dssp HHHTTCSEEEESTTTTTB
T ss_pred HhhcCCCEEEEchhhccc
Confidence 999999999999977654
No 91
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.74 E-value=3.6e-08 Score=87.99 Aligned_cols=148 Identities=17% Similarity=0.231 Sum_probs=94.7
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEe
Q 017176 64 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKC 141 (376)
Q Consensus 64 ~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKi 141 (376)
+.|+++.+.+.+++++.+.++.+.+.|++.|++++.||.. .+.++.+|+.+ +.++.+-
T Consensus 9 ~~~~i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~~~~~-------------------~~~i~~ir~~~~~~~~ig~~- 68 (205)
T 1wa3_A 9 KHKIVAVLRANSVEEAKEKALAVFEGGVHLIEITFTVPDA-------------------DTVIKELSFLKEKGAIIGAG- 68 (205)
T ss_dssp HHCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEETTSTTH-------------------HHHHHHTHHHHHTTCEEEEE-
T ss_pred hCCEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCChhH-------------------HHHHHHHHHHCCCCcEEEec-
Confidence 4579999999999999999999999999999999877631 23455555543 2333221
Q ss_pred cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccc-------------cCCC-CCC----------CCCCCC---ccc
Q 017176 142 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKAL-------------LNGI-SPA----------ENRTIP---PLK 194 (376)
Q Consensus 142 R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~-------------~~g~-~~~----------~~~~~~---~~~ 194 (376)
. . .+.++.. .+.+.|+|+| +++.... ..|. ++. +.-.+. ...
T Consensus 69 -~-v---~~~~~~~-----~a~~~Gad~i-v~~~~~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g 137 (205)
T 1wa3_A 69 -T-V---TSVEQCR-----KAVESGAEFI-VSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVG 137 (205)
T ss_dssp -S-C---CSHHHHH-----HHHHHTCSEE-ECSSCCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHH
T ss_pred -c-c---CCHHHHH-----HHHHcCCCEE-EcCCCCHHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccC
Confidence 1 0 1222221 1224678887 6544220 0000 000 000000 112
Q ss_pred HHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCc
Q 017176 195 YEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 195 ~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~ 244 (376)
.+.++++.+.++++||++.|||. .+++.++++.|||+|.+|++++. +.
T Consensus 138 ~~~~~~l~~~~~~~pvia~GGI~-~~~~~~~~~~Ga~~v~vGs~i~~-~d 185 (205)
T 1wa3_A 138 PQFVKAMKGPFPNVKFVPTGGVN-LDNVCEWFKAGVLAVGVGSALVK-GT 185 (205)
T ss_dssp HHHHHHHHTTCTTCEEEEBSSCC-TTTHHHHHHHTCSCEEECHHHHC-SC
T ss_pred HHHHHHHHHhCCCCcEEEcCCCC-HHHHHHHHHCCCCEEEECccccC-CC
Confidence 45667777666689999999996 78999999999999999999988 55
No 92
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=98.71 E-value=1.4e-07 Score=91.53 Aligned_cols=141 Identities=9% Similarity=0.002 Sum_probs=105.9
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecC
Q 017176 66 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRI 143 (376)
Q Consensus 66 p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~ 143 (376)
|+-..+...+++++.++|+++.+.||+.|+||+||+ +++...+++++||+.+ ++++.++..-
T Consensus 135 p~~~~~g~~~~~~~~~~a~~~~~~Gf~~iKik~g~~----------------~~~~~~e~v~avr~a~g~~~~l~vDan~ 198 (359)
T 1mdl_A 135 QAYDSHSLDGVKLATERAVTAAELGFRAVKTRIGYP----------------ALDQDLAVVRSIRQAVGDDFGIMVDYNQ 198 (359)
T ss_dssp EEEEECCSCHHHHHHHHHHHHHHTTCSEEEEECCCS----------------SHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred eeeeecCCCCHHHHHHHHHHHHHcCCCEEEEecCCC----------------CHHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 443343225789999999999999999999998772 4577889999999987 6889999888
Q ss_pred CCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHH
Q 017176 144 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVN 223 (376)
Q Consensus 144 g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~ 223 (376)
+|+. ++.+++ .+.+++.|+++|. . .+++.+++..+++++.. ++||++++.+.++++++
T Consensus 199 ~~~~----~~a~~~-~~~l~~~~i~~iE--------~--------P~~~~~~~~~~~l~~~~-~iPI~~de~~~~~~~~~ 256 (359)
T 1mdl_A 199 SLDV----PAAIKR-SQALQQEGVTWIE--------E--------PTLQHDYEGHQRIQSKL-NVPVQMGENWLGPEEMF 256 (359)
T ss_dssp CSCH----HHHHHH-HHHHHHHTCSCEE--------C--------CSCTTCHHHHHHHHHTC-SSCEEECTTCCSHHHHH
T ss_pred CCCH----HHHHHH-HHHHHHhCCCeEE--------C--------CCChhhHHHHHHHHHhC-CCCEEeCCCCCCHHHHH
Confidence 8853 344554 3446778998874 0 01223477778887764 89999999999999999
Q ss_pred HHHH-cCcCeeEEchHHhhCCc
Q 017176 224 AALR-KGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 224 ~~l~-~Gad~VmiGRa~l~~P~ 244 (376)
++++ ..||+|++-...++..+
T Consensus 257 ~~i~~~~~d~v~ik~~~~GGi~ 278 (359)
T 1mdl_A 257 KALSIGACRLAMPDAMKIGGVT 278 (359)
T ss_dssp HHHHTTCCSEECCBTTTTTHHH
T ss_pred HHHHcCCCCEEeecchhhCCHH
Confidence 9998 67999998655544433
No 93
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.71 E-value=8e-08 Score=90.89 Aligned_cols=163 Identities=17% Similarity=0.176 Sum_probs=96.7
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecC
Q 017176 64 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI 143 (376)
Q Consensus 64 ~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~ 143 (376)
..++++.+.. .+.++.+.++|+++|+++.++|... +..+ |..+.+.++. ++++++.+++|+.++.+.
T Consensus 21 ~~~~i~~~~~------~~~a~~~~~~Ga~~i~~~e~v~~~~--~~~~-G~~~~~~~~~----i~~i~~~~~~Pvi~~~~~ 87 (297)
T 2zbt_A 21 KGGVIMDVTT------PEQAVIAEEAGAVAVMALERVPADI--RAQG-GVARMSDPKI----IKEIMAAVSIPVMAKVRI 87 (297)
T ss_dssp TTEEEEEESS------HHHHHHHHHHTCSEEEECSSCHHHH--HHTT-CCCCCCCHHH----HHHHHTTCSSCEEEEEET
T ss_pred hCCeeeeech------HHHHHHHHHCCCcEEEeccccchHH--Hhhc-CCccCCCHHH----HHHHHHhcCCCeEEEecc
Confidence 4467776654 4667777888999999987665431 2222 5456666654 455677778999988776
Q ss_pred CCCCCccHHHH--------------------------------------HHHHHHHhhcCCccEEEEccCccc-------
Q 017176 144 GVDDHDSYNQL--------------------------------------CDFIYKVSSLSPTRHFIIHSRKAL------- 178 (376)
Q Consensus 144 g~~~~~~~~~~--------------------------------------~~~i~~~~e~~Gvd~I~vh~r~~~------- 178 (376)
++. +.++.+ .+...+ +.+.|+|+|.+||....
T Consensus 88 ~~~--~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~i~l~~~v~~~~~~~~-a~~~Gad~I~v~G~~~~g~~~e~~ 164 (297)
T 2zbt_A 88 GHF--VEAMILEAIGVDFIDESEVLTPADEEHHIDKWKFKVPFVCGARNLGEALR-RIAEGAAMIRTKGEAGTGNVVEAV 164 (297)
T ss_dssp TCH--HHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHH-HHHTTCSEEEECCCSSSCCTHHHH
T ss_pred CCH--HHHHHHHHCCCCEEeeeCCCChHHHHHHHHHhCCCceEEeecCCHHHHHH-HHHcCCCEEEEcccccCcchHHHH
Confidence 531 000000 000011 12345555555532100
Q ss_pred ------------cCCCCCCCC---CCCCcccHHHHHHHHhhCCCCeEE--EecCCCCHHHHHHHHHcCcCeeEEchHHhh
Q 017176 179 ------------LNGISPAEN---RTIPPLKYEYYYALLRDFPDLTFT--LNGGINTVDEVNAALRKGAHHVMVGRAAYQ 241 (376)
Q Consensus 179 ------------~~g~~~~~~---~~~~~~~~~~v~~~~~~~~~ipVi--~nGgI~s~~da~~~l~~Gad~VmiGRa~l~ 241 (376)
..|..+... ....+..++.+.++++.. ++||+ +.|||.|++++.++++.|||+|++|++++.
T Consensus 165 ~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~-~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~ 243 (297)
T 2zbt_A 165 RHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHG-RLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFK 243 (297)
T ss_dssp HHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHS-SCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGG
T ss_pred hhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhc-CCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhC
Confidence 000000000 000122366777777654 78988 999999999999999999999999999995
Q ss_pred CC
Q 017176 242 NP 243 (376)
Q Consensus 242 ~P 243 (376)
.+
T Consensus 244 ~~ 245 (297)
T 2zbt_A 244 SG 245 (297)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 94
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=98.71 E-value=1.4e-07 Score=91.94 Aligned_cols=133 Identities=12% Similarity=0.060 Sum_probs=105.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 152 (376)
+++++.++|+++.+.||+.|.|++||+ +++...+++++||+.+ ++++.++...+|+. +
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~----------------~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~----~ 205 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRP----------------DLKEDVDRVSALREHLGDSFPLMVDANMKWTV----D 205 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS----------------SHHHHHHHHHHHHHHHCTTSCEEEECTTCSCH----H
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH----H
Confidence 799999999999999999999998873 3567789999999887 68899999888853 3
Q ss_pred HHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcC
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAH 231 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad 231 (376)
+.+++ .+.+++.|+++|. . .+++.+++..+++++.. ++||++++.+.++++++++++ ..||
T Consensus 206 ~a~~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPI~~dE~~~~~~~~~~~i~~~~~d 267 (371)
T 2ovl_A 206 GAIRA-ARALAPFDLHWIE----E------------PTIPDDLVGNARIVRES-GHTIAGGENLHTLYDFHNAVRAGSLT 267 (371)
T ss_dssp HHHHH-HHHHGGGCCSEEE----C------------CSCTTCHHHHHHHHHHH-CSCEEECTTCCSHHHHHHHHHHTCCS
T ss_pred HHHHH-HHHHHhcCCCEEE----C------------CCCcccHHHHHHHHhhC-CCCEEeCCCCCCHHHHHHHHHcCCCC
Confidence 45554 3456789999874 1 01223477777877764 899999999999999999998 6799
Q ss_pred eeEEchHHhhCCch
Q 017176 232 HVMVGRAAYQNPWY 245 (376)
Q Consensus 232 ~VmiGRa~l~~P~l 245 (376)
.|++-.+-++.++-
T Consensus 268 ~v~ik~~~~GGi~~ 281 (371)
T 2ovl_A 268 LPEPDVSNIGGYTT 281 (371)
T ss_dssp EECCCTTTTTSHHH
T ss_pred EEeeCccccCCHHH
Confidence 99997766666554
No 95
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=98.71 E-value=2.3e-07 Score=91.75 Aligned_cols=139 Identities=14% Similarity=0.071 Sum_probs=105.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecC------CCCCccccCCCCcccccc-CCHHHHHHHHHHHhccc--CccEEEEecCCC
Q 017176 75 NLDNLAKATELANAYNYDEINLNC------GCPSPKVAGHGCFGVSLM-LDPKFVGEAMSVIAANT--NVPVSVKCRIGV 145 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~------gcP~~~v~r~g~yG~~l~-~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~ 145 (376)
++++|.++|+++.+.||+.|.|+. |++......+..||++.. ++++...+++++||+.+ ++++.+...-+|
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~ 229 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIHSLL 229 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCC
Confidence 899999999999999999999996 652110011225788775 57889999999999987 578888877666
Q ss_pred CCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHH
Q 017176 146 DDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAA 225 (376)
Q Consensus 146 ~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~ 225 (376)
+ .++.++++ +.+++.|+++|.- .+++.+++..+++++.. ++||++.+.+.++++++++
T Consensus 230 ~----~~~ai~~~-~~l~~~~i~~iE~----------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~ 287 (410)
T 2gl5_A 230 G----TNSAIQFA-KAIEKYRIFLYEE----------------PIHPLNSDNMQKVSRST-TIPIATGERSYTRWGYREL 287 (410)
T ss_dssp C----HHHHHHHH-HHHGGGCEEEEEC----------------SSCSSCHHHHHHHHHHC-SSCEEECTTCCTTHHHHHH
T ss_pred C----HHHHHHHH-HHHHhcCCCeEEC----------------CCChhhHHHHHHHHhhC-CCCEEecCCcCCHHHHHHH
Confidence 4 34555554 4567889988751 01223477778887765 8999999999999999999
Q ss_pred HH-cCcCeeEE
Q 017176 226 LR-KGAHHVMV 235 (376)
Q Consensus 226 l~-~Gad~Vmi 235 (376)
++ ..||.|++
T Consensus 288 i~~~~~d~v~i 298 (410)
T 2gl5_A 288 LEKQSIAVAQP 298 (410)
T ss_dssp HHTTCCSEECC
T ss_pred HHcCCCCEEec
Confidence 98 56899887
No 96
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.70 E-value=1.8e-08 Score=92.41 Aligned_cols=97 Identities=10% Similarity=0.084 Sum_probs=73.0
Q ss_pred EEEEecCCCCCCc-----cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEE
Q 017176 137 VSVKCRIGVDDHD-----SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFT 211 (376)
Q Consensus 137 v~vKiR~g~~~~~-----~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi 211 (376)
..||++.||.+.. +..++ ++.+++.|+|.|++|..+....+. ..+++.+++++ . .++||+
T Consensus 13 ~~vk~~~G~~~~~~~~~~~~~~~----a~~~~~~Gad~i~v~d~~~~~~~~---------~~~~~~i~~i~-~-~~ipvi 77 (241)
T 1qo2_A 13 KVARMIKGRKENTIFYEKDPVEL----VEKLIEEGFTLIHVVDLSNAIENS---------GENLPVLEKLS-E-FAEHIQ 77 (241)
T ss_dssp EEEEEGGGCGGGEEEESSCHHHH----HHHHHHTTCCCEEEEEHHHHHHCC---------CTTHHHHHHGG-G-GGGGEE
T ss_pred EEEEEeccccccceecCcCHHHH----HHHHHHcCCCEEEEecccccccCC---------chhHHHHHHHH-h-cCCcEE
Confidence 5788998886532 23333 344567999999998754321111 12367777776 5 489999
Q ss_pred EecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchhhH
Q 017176 212 LNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLG 248 (376)
Q Consensus 212 ~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~ 248 (376)
++|||.+.+++.++++.|||+|++|++++.||+++.+
T Consensus 78 ~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~ 114 (241)
T 1qo2_A 78 IGGGIRSLDYAEKLRKLGYRRQIVSSKVLEDPSFLKS 114 (241)
T ss_dssp EESSCCSHHHHHHHHHTTCCEEEECHHHHHCTTHHHH
T ss_pred EECCCCCHHHHHHHHHCCCCEEEECchHhhChHHHHH
Confidence 9999999999999999999999999999999998543
No 97
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=98.68 E-value=3.7e-07 Score=89.29 Aligned_cols=130 Identities=9% Similarity=0.018 Sum_probs=103.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccH
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~ 151 (376)
.+++.+.++|+++.+.||+.|+|++|+ +++...+++++||+.+ ++++.++..-||+.
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~g~-----------------~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~---- 202 (379)
T 2rdx_A 144 RSEAETRAELARHRAAGYRQFQIKVGA-----------------DWQSDIDRIRACLPLLEPGEKAMADANQGWRV---- 202 (379)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEECCS-----------------CHHHHHHHHHHHGGGSCTTCEEEEECTTCSCH----
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccC-----------------CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH----
Confidence 678999999999999999999999875 4688899999999988 58899998888753
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCc
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGA 230 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Ga 230 (376)
++.+++ .+.+++.|+ +|. + . ++ +++..+++++.. ++||++++.+.++++++++++ ..|
T Consensus 203 ~~a~~~-~~~l~~~~i-~iE-----~---P--------~~--~~~~~~~l~~~~-~iPI~~de~i~~~~~~~~~i~~~~~ 261 (379)
T 2rdx_A 203 DNAIRL-ARATRDLDY-ILE-----Q---P--------CR--SYEECQQVRRVA-DQPMKLDECVTGLHMAQRIVADRGA 261 (379)
T ss_dssp HHHHHH-HHHTTTSCC-EEE-----C---C--------SS--SHHHHHHHHTTC-CSCEEECTTCCSHHHHHHHHHHTCC
T ss_pred HHHHHH-HHHHHhCCe-EEe-----C---C--------cC--CHHHHHHHHhhC-CCCEEEeCCcCCHHHHHHHHHcCCC
Confidence 455554 455778898 763 0 0 11 477777887764 899999999999999999998 679
Q ss_pred CeeEEchHHhhCCch
Q 017176 231 HHVMVGRAAYQNPWY 245 (376)
Q Consensus 231 d~VmiGRa~l~~P~l 245 (376)
|.|++-.+.++.++-
T Consensus 262 d~v~ik~~~~GGit~ 276 (379)
T 2rdx_A 262 EICCLKISNLGGLSK 276 (379)
T ss_dssp SEEEEETTTTTSHHH
T ss_pred CEEEEeccccCCHHH
Confidence 999997666655543
No 98
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=98.68 E-value=1.9e-07 Score=85.80 Aligned_cols=168 Identities=13% Similarity=0.119 Sum_probs=108.4
Q ss_pred CCEEEEecCCCH--HHHHHHHHHHHHCCCCEEEec--CCCCCccccCCCCccc-----ccc--CCHHHHHHHHHHHhccc
Q 017176 65 HPIVLQIGGSNL--DNLAKATELANAYNYDEINLN--CGCPSPKVAGHGCFGV-----SLM--LDPKFVGEAMSVIAANT 133 (376)
Q Consensus 65 ~p~~vQL~g~~~--~~~~~aa~~~~~~G~d~IeiN--~gcP~~~v~r~g~yG~-----~l~--~~~~~~~eiv~~v~~~~ 133 (376)
..++..|...+| +.+.+.++.+++. +|.|+++ ++||... |.+-. +|. .+.....++++++++.+
T Consensus 5 ~~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~D----G~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~ 79 (248)
T 1geq_A 5 GSLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIAD----GKTIQESHYRALKNGFKLREAFWIVKEFRRHS 79 (248)
T ss_dssp TEEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTS----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTC
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCC----CHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhC
Confidence 457889988887 6899999999998 9999998 5666531 11100 000 26677889999999988
Q ss_pred CccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCcc-----c------cC-----CCCC-------------
Q 017176 134 NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA-----L------LN-----GISP------------- 184 (376)
Q Consensus 134 ~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~-----~------~~-----g~~~------------- 184 (376)
++||.+............++.+ . .+.++|+|.|++|.-.. . ++ +.++
T Consensus 80 ~~pv~~~~~~~~~~~~~~~~~~---~-~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~ 155 (248)
T 1geq_A 80 STPIVLMTYYNPIYRAGVRNFL---A-EAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDM 155 (248)
T ss_dssp CCCEEEEECHHHHHHHCHHHHH---H-HHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHH
T ss_pred CCCEEEEeccchhhhcCHHHHH---H-HHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhc
Confidence 8898876432100000012222 2 23357899888874110 0 00 0000
Q ss_pred CC------------CC--CCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhC
Q 017176 185 AE------------NR--TIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 242 (376)
Q Consensus 185 ~~------------~~--~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 242 (376)
.+ .. ...+...+.+.++++.. ++||++.|||++++++.++++.|||+|.+|++++..
T Consensus 156 ~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~-~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai~~~ 226 (248)
T 1geq_A 156 TTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRIC-RNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVKI 226 (248)
T ss_dssp CSSEEEEECCC-------CCCHHHHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred CCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhc-CCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHHHhh
Confidence 00 00 01122356777777765 899999999999999999999999999999998765
No 99
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=98.66 E-value=7.4e-07 Score=87.16 Aligned_cols=136 Identities=9% Similarity=0.009 Sum_probs=105.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccH
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~ 151 (376)
.+++++.++|+++.+.||+.|.|++|++. || ...+++...+++++||+.+ ++++.++..-+|+ .
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~--------~~--~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~----~ 213 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPP--------VS--WAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYS----R 213 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTT--------ST--TCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCC----H
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCc--------cc--cccchHHHHHHHHHHHHHhCCCCeEEEECCCCCC----H
Confidence 58999999999999999999999998863 22 2348999999999999987 6889998887775 3
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCC-HHHHHHHHH-cC
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINT-VDEVNAALR-KG 229 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s-~~da~~~l~-~G 229 (376)
++.+++ .+.+++.|+++|.- .+++.+++..+++++.. ++||++.+.+.+ +++++++++ ..
T Consensus 214 ~~a~~~-~~~l~~~~i~~iE~----------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~~i~~~~ 275 (382)
T 1rvk_A 214 TDALAL-GRGLEKLGFDWIEE----------------PMDEQSLSSYKWLSDNL-DIPVVGPESAAGKHWHRAEWIKAGA 275 (382)
T ss_dssp HHHHHH-HHHHHTTTCSEEEC----------------CSCTTCHHHHHHHHHHC-SSCEEECSSCSSHHHHHHHHHHTTC
T ss_pred HHHHHH-HHHHHhcCCCEEeC----------------CCChhhHHHHHHHHhhC-CCCEEEeCCccCcHHHHHHHHHcCC
Confidence 455554 34667899998751 01223477777887765 899999999999 999999998 56
Q ss_pred cCeeEEchHHhh
Q 017176 230 AHHVMVGRAAYQ 241 (376)
Q Consensus 230 ad~VmiGRa~l~ 241 (376)
||.|++--.-++
T Consensus 276 ~d~v~ik~~~~G 287 (382)
T 1rvk_A 276 CDILRTGVNDVG 287 (382)
T ss_dssp CSEEEECHHHHT
T ss_pred CCEEeeCchhcC
Confidence 999998444433
No 100
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.65 E-value=6.7e-07 Score=82.96 Aligned_cols=161 Identities=17% Similarity=0.210 Sum_probs=100.8
Q ss_pred CCEEEEecCCCH--HHHHHHHHHHHHCCCCEEEecCCCCCccccCCC-----------CccccccCCHHHHHHHHHHHhc
Q 017176 65 HPIVLQIGGSNL--DNLAKATELANAYNYDEINLNCGCPSPKVAGHG-----------CFGVSLMLDPKFVGEAMSVIAA 131 (376)
Q Consensus 65 ~p~~vQL~g~~~--~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g-----------~yG~~l~~~~~~~~eiv~~v~~ 131 (376)
..+++-|...+| +.+.+.++.+.++|+|.|+++.-++.+. . .| ..| -+++...++++++++
T Consensus 18 ~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~-~-dg~~i~~a~~~al~~g----~~~~~~~~~i~~ir~ 91 (262)
T 1rd5_A 18 TAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPY-I-DGPIIQASVARALASG----TTMDAVLEMLREVTP 91 (262)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCT-T-SCHHHHHHHHHHHTTT----CCHHHHHHHHHHHGG
T ss_pred ceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcc-c-CCHHHHHHHHHHHHcC----CCHHHHHHHHHHHHh
Confidence 346666655555 8889999999999999999986554221 1 11 112 367889999999999
Q ss_pred ccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEcc--------------------------Ccc-----c--
Q 017176 132 NTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHS--------------------------RKA-----L-- 178 (376)
Q Consensus 132 ~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~--------------------------r~~-----~-- 178 (376)
.+++|+.+-.+.+......++. +.++|+|.+++|. .+. .
T Consensus 92 ~~~~Pv~~m~~~~~~~~~~~~~--------a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~ 163 (262)
T 1rd5_A 92 ELSCPVVLLSYYKPIMFRSLAK--------MKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEIT 163 (262)
T ss_dssp GCSSCEEEECCSHHHHSCCTHH--------HHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHH
T ss_pred cCCCCEEEEecCcHHHHHHHHH--------HHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHH
Confidence 8899987743221000000100 1134444444332 110 0
Q ss_pred -----------cCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhh
Q 017176 179 -----------LNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 241 (376)
Q Consensus 179 -----------~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~ 241 (376)
..|.++.. ....+...+.+.++++.. ++||++.|||.|++++.++++.|||+|.+|+++..
T Consensus 164 ~~~~g~v~~~s~~G~tG~~-~~~~~~~~~~i~~v~~~~-~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~~ 235 (262)
T 1rd5_A 164 KASEGFVYLVSVNGVTGPR-ANVNPRVESLIQEVKKVT-NKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVR 235 (262)
T ss_dssp HHCCSCEEEECSSCCBCTT-SCBCTHHHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred hcCCCeEEEecCCCCCCCC-cCCCchHHHHHHHHHhhc-CCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 01111111 012222345777777654 89999999999999999999999999999999764
No 101
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=98.65 E-value=5.6e-07 Score=87.61 Aligned_cols=142 Identities=10% Similarity=0.163 Sum_probs=109.9
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEec
Q 017176 65 HPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCR 142 (376)
Q Consensus 65 ~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR 142 (376)
-|+..++.+.+++++.+.|+++.+.||+.|.|++|+ +++...+++++||+.+ ++++.++..
T Consensus 131 v~~~~~i~~~~~~~~~~~a~~~~~~Gf~~iKik~g~-----------------~~~~~~e~v~avr~a~g~~~~l~vDan 193 (369)
T 2p8b_A 131 FPVTHVLSIADPENMAEEAASMIQKGYQSFKMKVGT-----------------NVKEDVKRIEAVRERVGNDIAIRVDVN 193 (369)
T ss_dssp EECCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS-----------------CHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred eeeeEEecCCChHHHHHHHHHHHHcCcCEEEEEeCC-----------------CHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 345567777889999999999999999999998763 4678889999999887 578989888
Q ss_pred CCCCCCccHHHHH-HHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHH
Q 017176 143 IGVDDHDSYNQLC-DFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE 221 (376)
Q Consensus 143 ~g~~~~~~~~~~~-~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~d 221 (376)
-+|+. ++.+ ++ .+.+++.|+++|. . .+++.+++..+++++.. ++||++++.+.++++
T Consensus 194 ~~~~~----~~a~~~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPI~~dE~~~~~~~ 251 (369)
T 2p8b_A 194 QGWKN----SANTLTA-LRSLGHLNIDWIE----Q------------PVIADDIDAMAHIRSKT-DLPLMIDEGLKSSRE 251 (369)
T ss_dssp TTTBS----HHHHHHH-HHTSTTSCCSCEE----C------------CBCTTCHHHHHHHHHTC-CSCEEESTTCCSHHH
T ss_pred CCCCH----HHHHHHH-HHHHHhCCCcEEE----C------------CCCcccHHHHHHHHHhC-CCCEEeCCCCCCHHH
Confidence 88864 2444 44 4457788998875 1 01223477777887764 899999999999999
Q ss_pred HHHHHH-cCcCeeEEchHHhhCCch
Q 017176 222 VNAALR-KGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 222 a~~~l~-~Gad~VmiGRa~l~~P~l 245 (376)
+.++++ ..||+|++-..-++-.+-
T Consensus 252 ~~~~i~~~~~d~v~ik~~~~GGit~ 276 (369)
T 2p8b_A 252 MRQIIKLEAADKVNIKLMKCGGIYP 276 (369)
T ss_dssp HHHHHHHTCCSEEEECHHHHTSHHH
T ss_pred HHHHHHhCCCCEEEeecchhCCHHH
Confidence 999998 679999997776666543
No 102
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.65 E-value=2.6e-06 Score=78.05 Aligned_cols=203 Identities=13% Similarity=0.073 Sum_probs=119.8
Q ss_pred CCCeecCCcEEEccCCCCChH-HHHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCCCCEEEEecC-CCHHHH
Q 017176 2 VARQYLPPWFSVAPMMDWTDN-HYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGG-SNLDNL 79 (376)
Q Consensus 2 i~~~~l~nri~lAPM~~~td~-~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g-~~~~~~ 79 (376)
|++.+|..|+++- -..+.+. .++....+.| +.++..-+-..+ +. ......+++.-+ +.++..+-.| .+.++.
T Consensus 6 i~~~~~~srl~~G-tgky~~~~~~~~ai~asg-~eivtva~rR~~-~~--~~~~~~~~~~i~-~~~~lpntaG~~taeeA 79 (268)
T 2htm_A 6 VGPVELKSRLILG-SGKYEDFGVMREAIAAAK-AEVVTVSVRRVE-LK--APGHVGLLEALE-GVRLLPNTAGARTAEEA 79 (268)
T ss_dssp ETTEEECCSEEEE-CSSCSCHHHHHHHHHHTT-CSEEEEEEEECC----------CHHHHTT-TSEEEEBCTTCCSHHHH
T ss_pred ECCEEeecceEEe-cCCCCCHHHHHHHHHHhC-CCEEEEEccccC-CC--CCCcccHHHHHh-hhhccCcccCCCCHHHH
Confidence 7899999999985 3446555 4455556665 666544422221 10 111123333333 5556666666 578999
Q ss_pred HHHHHHHHHC-CCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHH
Q 017176 80 AKATELANAY-NYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFI 158 (376)
Q Consensus 80 ~~aa~~~~~~-G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i 158 (376)
..+++++.+. |-+.|.|- +.....| ++.|+....+-.+.+.+. ++.+...+. ++ . .+
T Consensus 80 v~~a~lare~~gt~~iKlE-------vi~d~~~---l~pD~~~tv~aa~~L~k~-Gf~Vlpy~~---~D---~-~~---- 137 (268)
T 2htm_A 80 VRLARLGRLLTGERWVKLE-------VIPDPTY---LLPDPLETLKAAERLIEE-DFLVLPYMG---PD---L-VL---- 137 (268)
T ss_dssp HHHHHHHHHHHCCSEEBCC-------CCSCTTT---TCCCHHHHHHHHHHHHHT-TCEECCEEC---SC---H-HH----
T ss_pred HHHHHhhhHhcCcceeeee-------eccCccc---cCcCHHHHHHHHHHHHHC-CCEEeeccC---CC---H-HH----
Confidence 9999988764 55666542 2222222 566776666655555432 322221111 22 2 22
Q ss_pred HHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCC-CeEEEecCCCCHHHHHHHHHcCcCeeEEch
Q 017176 159 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPD-LTFTLNGGINTVDEVNAALRKGAHHVMVGR 237 (376)
Q Consensus 159 ~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~-ipVi~nGgI~s~~da~~~l~~Gad~VmiGR 237 (376)
++.+++.|+++|..-+.--. .|. ...+.+.+..+++..++ +|||..|||.+++|+..+++.|||+|++|+
T Consensus 138 ak~l~~~G~~aVmPlg~pIG-sG~--------Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgS 208 (268)
T 2htm_A 138 AKRLAALGTATVMPLAAPIG-SGW--------GVRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNT 208 (268)
T ss_dssp HHHHHHHTCSCBEEBSSSTT-TCC--------CSTTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEESH
T ss_pred HHHHHhcCCCEEEecCccCc-CCc--------ccCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 34456789998844232100 011 11124567777763457 999999999999999999999999999999
Q ss_pred HHhh
Q 017176 238 AAYQ 241 (376)
Q Consensus 238 a~l~ 241 (376)
++..
T Consensus 209 AI~~ 212 (268)
T 2htm_A 209 AIAE 212 (268)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 9874
No 103
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=98.63 E-value=3.4e-07 Score=89.87 Aligned_cols=140 Identities=6% Similarity=-0.042 Sum_probs=106.2
Q ss_pred CEEEEec-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEec
Q 017176 66 PIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCR 142 (376)
Q Consensus 66 p~~vQL~-g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR 142 (376)
|+-..+. ..++++|.++|+++.+.||+.|+|++|| .+++. .+++++||+.+ ++++.++..
T Consensus 154 p~~~~~g~~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~~-~e~v~avr~a~g~d~~l~vDan 216 (388)
T 2nql_A 154 PAYVSGLPERTLKARGELAKYWQDRGFNAFKFATPV----------------ADDGP-AAEIANLRQVLGPQAKIAADMH 216 (388)
T ss_dssp EEEEECCCCSSHHHHHHHHHHHHHTTCCEEEEEGGG----------------CTTCH-HHHHHHHHHHHCTTSEEEEECC
T ss_pred EeeEEeCCCCCHHHHHHHHHHHHHhCCCEEEEeCCC----------------CChHH-HHHHHHHHHHhCCCCEEEEECC
Confidence 4444443 3589999999999999999999998764 23567 88999999877 688999988
Q ss_pred CCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHH
Q 017176 143 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 222 (376)
Q Consensus 143 ~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da 222 (376)
-+|+ .++.+++ .+.+++.|+++|. + .+++.+++..+++++.. ++||++++.+.+++++
T Consensus 217 ~~~~----~~~a~~~-~~~l~~~~i~~iE-----q-----------P~~~~d~~~~~~l~~~~-~iPI~~dE~~~~~~~~ 274 (388)
T 2nql_A 217 WNQT----PERALEL-IAEMQPFDPWFAE-----A-----------PVWTEDIAGLEKVSKNT-DVPIAVGEEWRTHWDM 274 (388)
T ss_dssp SCSC----HHHHHHH-HHHHGGGCCSCEE-----C-----------CSCTTCHHHHHHHHTSC-CSCEEECTTCCSHHHH
T ss_pred CCCC----HHHHHHH-HHHHhhcCCCEEE-----C-----------CCChhhHHHHHHHHhhC-CCCEEEeCCcCCHHHH
Confidence 7775 3455554 3456789999874 0 01223477777887764 8999999999999999
Q ss_pred HHHHH-cCcCeeEEchHHhhCCch
Q 017176 223 NAALR-KGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 223 ~~~l~-~Gad~VmiGRa~l~~P~l 245 (376)
+++++ ..||+|++-... +.++-
T Consensus 275 ~~~i~~~~~d~v~ik~~~-GGit~ 297 (388)
T 2nql_A 275 RARIERCRIAIVQPEMGH-KGITN 297 (388)
T ss_dssp HHHHTTSCCSEECCCHHH-HCHHH
T ss_pred HHHHHcCCCCEEEecCCC-CCHHH
Confidence 99998 669999997766 66554
No 104
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=98.61 E-value=3.5e-07 Score=89.85 Aligned_cols=140 Identities=8% Similarity=0.018 Sum_probs=107.8
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEecCCCCCc--cccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCC
Q 017176 73 GSNLDNLAKATELANAYNYDEINLNCGCPSP--KVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDH 148 (376)
Q Consensus 73 g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~--~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~ 148 (376)
+.++++|.++|+++.+.||+.|.|+.||+.. ...+ ..||++..++++...+++++||+.+ ++++.+...-+|+
T Consensus 135 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~-~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~~-- 211 (392)
T 2poz_A 135 ADTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQH-VTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGLT-- 211 (392)
T ss_dssp CCSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEEC-CBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSC--
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccccccccccc-cccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCC--
Confidence 3579999999999999999999999987431 0012 3578888888999999999999987 5788888877765
Q ss_pred ccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-
Q 017176 149 DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR- 227 (376)
Q Consensus 149 ~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~- 227 (376)
.++.++++ +.+++.|+++|.- .+++.+++..+++++.. ++||++.+.+.++++++++++
T Consensus 212 --~~~a~~~~-~~l~~~~i~~iE~----------------P~~~~~~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~ 271 (392)
T 2poz_A 212 --TDETIRFC-RKIGELDICFVEE----------------PCDPFDNGALKVISEQI-PLPIAVGERVYTRFGFRKIFEL 271 (392)
T ss_dssp --HHHHHHHH-HHHGGGCEEEEEC----------------CSCTTCHHHHHHHHHHC-SSCEEECTTCCHHHHHHHHHTT
T ss_pred --HHHHHHHH-HHHHhcCCCEEEC----------------CCCcccHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHHc
Confidence 34555554 4467889988751 11223477777887765 899999999999999999998
Q ss_pred cCcCeeEE
Q 017176 228 KGAHHVMV 235 (376)
Q Consensus 228 ~Gad~Vmi 235 (376)
..+|.|++
T Consensus 272 ~~~d~v~i 279 (392)
T 2poz_A 272 QACGIIQP 279 (392)
T ss_dssp TCCSEECC
T ss_pred CCCCEEec
Confidence 56899887
No 105
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=98.59 E-value=9.9e-07 Score=86.21 Aligned_cols=140 Identities=13% Similarity=0.060 Sum_probs=108.2
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEec
Q 017176 65 HPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCR 142 (376)
Q Consensus 65 ~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR 142 (376)
-|+...+...+++.+.++|+++.+.||+.|++++||| +++...+++++||+.+ ++++.++..
T Consensus 135 v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~----------------~~~~~~e~v~avr~a~g~~~~l~vDan 198 (378)
T 2qdd_A 135 VPINSSISTGTPDQMLGLIAEAAAQGYRTHSAKIGGS----------------DPAQDIARIEAISAGLPDGHRVTFDVN 198 (378)
T ss_dssp EEBEEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSS----------------CHHHHHHHHHHHHHSCCTTCEEEEECT
T ss_pred CceEEEecCCCHHHHHHHHHHHHHHhhhheeecCCCC----------------ChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 3444455456899999999999899999999998875 4678889999999987 578989888
Q ss_pred CCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHH
Q 017176 143 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 222 (376)
Q Consensus 143 ~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da 222 (376)
-+|+ .++.+++ .+.++ .|+ +|. + .++ +++..+++++.. ++||++++.+.+++++
T Consensus 199 ~~~~----~~~a~~~-~~~l~-~~i-~iE-----q-----------P~~--d~~~~~~l~~~~-~iPI~~dE~~~~~~~~ 252 (378)
T 2qdd_A 199 RAWT----PAIAVEV-LNSVR-ARD-WIE-----Q-----------PCQ--TLDQCAHVARRV-ANPIMLDECLHEFSDH 252 (378)
T ss_dssp TCCC----HHHHHHH-HTSCC-CCC-EEE-----C-----------CSS--SHHHHHHHHTTC-CSCEEECTTCCSHHHH
T ss_pred CCCC----HHHHHHH-HHHhC-CCc-EEE-----c-----------CCC--CHHHHHHHHHhC-CCCEEECCCcCCHHHH
Confidence 7775 3355554 34456 787 653 0 011 477778887764 8999999999999999
Q ss_pred HHHHH-cCcCeeEEchHHhhCCchh
Q 017176 223 NAALR-KGAHHVMVGRAAYQNPWYT 246 (376)
Q Consensus 223 ~~~l~-~Gad~VmiGRa~l~~P~lf 246 (376)
+++++ ..||.|++-...++.++-+
T Consensus 253 ~~~i~~~~~d~v~ik~~~~GGi~~~ 277 (378)
T 2qdd_A 253 LAAWSRGACEGVKIKPNRVGGLTRA 277 (378)
T ss_dssp HHHHHHTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHhCCCCEEEecccccCCHHHH
Confidence 99998 6799999988887777653
No 106
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.59 E-value=8.5e-07 Score=83.65 Aligned_cols=49 Identities=18% Similarity=0.268 Sum_probs=42.2
Q ss_pred HHHHHHHHhhCCCCeEE--EecCCCCHHHHHHHHHcCcCeeEEchHHhhCCc
Q 017176 195 YEYYYALLRDFPDLTFT--LNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 195 ~~~v~~~~~~~~~ipVi--~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~ 244 (376)
++.+.++.+.. ++||+ +.|||.+++|+.++++.|||+|++|++++..+.
T Consensus 196 ~~ll~~i~~~~-~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a~d 246 (297)
T 4adt_A 196 IDLILLTRKLK-RLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESEN 246 (297)
T ss_dssp HHHHHHHHHHT-SCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTSSC
T ss_pred HHHHHHHHHhc-CCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcCCC
Confidence 66777777664 78876 999999999999999999999999999997554
No 107
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=98.57 E-value=1.1e-07 Score=112.80 Aligned_cols=201 Identities=15% Similarity=0.111 Sum_probs=124.2
Q ss_pred CCcEEEccCCC-CChHHHHHHHHHhCCCcEEE-ecceeecccccccchhhhhhccCCCCCCEEEEecCCCHHHH------
Q 017176 8 PPWFSVAPMMD-WTDNHYRTLARLISKHAWLY-TEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNL------ 79 (376)
Q Consensus 8 ~nri~lAPM~~-~td~~~r~~~~~~Gg~gl~~-te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~~~~~------ 79 (376)
+.||++|||++ .++..+...+.++||.|.+- ..+.+.+.+.....++.+ ..+.+.|+.+++.-.+|..+
T Consensus 427 ~~PIi~a~M~~~~s~~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~~~r~---~~~~~~p~~vNl~~~~p~~~~~~~g~ 503 (3089)
T 3zen_D 427 RSPILLAGMTPTTVDAKIVAAAANAGHWAELAGGGQVTEQIFNDRIAELET---LLEPGRAIQFNTLFLDPYLWKLQVGG 503 (3089)
T ss_dssp SCSEEECCCHHHHTSHHHHHHHHHTTCEEEECSTTCCSHHHHHHHHHHHHH---HSCTTCCCEEEEECSCHHHHHHHHHH
T ss_pred CCCEEeCCCcCCcCCHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHH---hcCCCCceeechhhcChhhhhhccCH
Confidence 67899999995 56899999999999988873 333344433222222222 23347889999987777431
Q ss_pred HHHHHHHHHCC--CCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCcc-EEEEecCCCCCCccHHHHHH
Q 017176 80 AKATELANAYN--YDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVP-VSVKCRIGVDDHDSYNQLCD 156 (376)
Q Consensus 80 ~~aa~~~~~~G--~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~p-v~vKiR~g~~~~~~~~~~~~ 156 (376)
.+..+.+.+.| +|+|-+.+|.|.. +...++++.+++. ++. +.++.. +..+..+
T Consensus 504 ~~~~~~~~~~g~~vdgv~~~aG~P~~----------------ee~~~~i~~l~~~-Gi~~i~~~~~-------t~~~a~~ 559 (3089)
T 3zen_D 504 KRLVQRARQSGAPIDGLVVSAGIPDL----------------EEAVDIIDELNEV-GISHVVFKPG-------TVEQIRS 559 (3089)
T ss_dssp HHHHHHHHHTTCSCCEEEEESSCCCH----------------HHHHHHHTSTTHH-HHCSEEECCC-------SHHHHHH
T ss_pred HHHHHHHHHcCCCceEEEEeCCCCch----------------hHhHHHHHHHHHc-CCEEEEEeCC-------CHHHHHH
Confidence 35667778889 8899998888841 2223344443332 332 222321 2222212
Q ss_pred HHHHHhhcC-Cc-cEEEEccCccccCCCCCCCCCCCCcccHHHH----HHHHhhCCCCeEEEecCCCCHHHHHHHH----
Q 017176 157 FIYKVSSLS-PT-RHFIIHSRKALLNGISPAENRTIPPLKYEYY----YALLRDFPDLTFTLNGGINTVDEVNAAL---- 226 (376)
Q Consensus 157 ~i~~~~e~~-Gv-d~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v----~~~~~~~~~ipVi~nGgI~s~~da~~~l---- 226 (376)
+.++..+. |. ..|.+.|.+. +|+.+.. . ....+ .++ ++..++|||+.|||.|++++..++
T Consensus 560 -~~~i~~d~~~~~y~vv~~G~ea--GGH~g~~--~----~~~ll~~~~~~i-r~~~~iPViaaGGI~d~~~vaaal~g~w 629 (3089)
T 3zen_D 560 -VIRIAAEVPTKPVIVHIEGGRA--GGHHSWE--D----LDDLLLATYSEL-RSRSNITICVGGGIGTPERSAEYLSGRW 629 (3089)
T ss_dssp -HHHHHTTSTTSCEEEEECCSSS--SEECCSC--C----HHHHHHHHHHHH-TTCTTEEEEEESSCCCTTTTHHHHHTGG
T ss_pred -HHHhhhhcCCCcEEEEEeCCCc--CCCCCcc--c----HHHHHHHHHHHH-hhcCCCeEEEEeCCCCHHHHHHHhcccc
Confidence 22222221 21 1788887764 2222111 1 12333 344 344689999999999999999999
Q ss_pred -------HcCcCeeEEchHHhhCCch
Q 017176 227 -------RKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 227 -------~~Gad~VmiGRa~l~~P~l 245 (376)
..|||||++|+.++..+.-
T Consensus 630 s~~~~~p~lGAdGV~vGTrfl~t~Ea 655 (3089)
T 3zen_D 630 AEVHGYPLMPIDGILVGTAAMATLEA 655 (3089)
T ss_dssp GGTTTCCCCCCSEEECSSTTTTCTTS
T ss_pred ccccCccCCCCCEEEecHHHHhCccc
Confidence 7899999999999987653
No 108
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=98.57 E-value=1.2e-06 Score=86.25 Aligned_cols=147 Identities=5% Similarity=-0.042 Sum_probs=110.0
Q ss_pred CCEEEEec-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCH-HHHHHHHHHHhccc--CccEEEE
Q 017176 65 HPIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDP-KFVGEAMSVIAANT--NVPVSVK 140 (376)
Q Consensus 65 ~p~~vQL~-g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~-~~~~eiv~~v~~~~--~~pv~vK 140 (376)
-|+-..+. +.++++|.++|+++.+.||+.|.+++ ||. |+ ++ +...+++++||+.+ ++++.++
T Consensus 134 vp~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~-spv---------G~----~~~~~~~e~v~avr~a~G~d~~l~vD 199 (401)
T 2hzg_A 134 KRPYASLLFGDTPQETLERARAARRDGFAAVKFGW-GPI---------GR----GTVAADADQIMAAREGLGPDGDLMVD 199 (401)
T ss_dssp BEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEEES-TTT---------TS----SCHHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred eEeeEEcCCCCCHHHHHHHHHHHHHhCCCeEEEcC-CCC---------CC----CHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 34443443 57899999999999999999999996 653 33 34 77889999999887 6889999
Q ss_pred ecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHh-hCCCCeEEEecCCCCH
Q 017176 141 CRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLR-DFPDLTFTLNGGINTV 219 (376)
Q Consensus 141 iR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~-~~~~ipVi~nGgI~s~ 219 (376)
..-+|.. +.++.++++ +.+++.|+++|. . . +++.+++..+++++ .. ++||++++.+.++
T Consensus 200 an~~~~~--~~~~a~~~~-~~l~~~~i~~iE----q----P--------~~~~d~~~~~~l~~~~~-~iPI~~dE~~~~~ 259 (401)
T 2hzg_A 200 VGQIFGE--DVEAAAARL-PTLDAAGVLWLE----E----P--------FDAGALAAHAALAGRGA-RVRIAGGEAAHNF 259 (401)
T ss_dssp CTTTTTT--CHHHHHTTH-HHHHHTTCSEEE----C----C--------SCTTCHHHHHHHHTTCC-SSEEEECTTCSSH
T ss_pred CCCCCCC--CHHHHHHHH-HHHHhcCCCEEE----C----C--------CCccCHHHHHHHHhhCC-CCCEEecCCcCCH
Confidence 8888820 123445443 446789999874 1 0 12234777778776 54 8999999999999
Q ss_pred HHHHHHHH-cCcCeeEEchHHhhCCch
Q 017176 220 DEVNAALR-KGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 220 ~da~~~l~-~Gad~VmiGRa~l~~P~l 245 (376)
++++++++ ..||+|++-...++.++-
T Consensus 260 ~~~~~~i~~~~~d~v~ik~~~~GGit~ 286 (401)
T 2hzg_A 260 HMAQHLMDYGRIGFIQIDCGRIGGLGP 286 (401)
T ss_dssp HHHHHHHHHSCCSEEEECHHHHTSHHH
T ss_pred HHHHHHHHCCCCCEEEeCcchhCCHHH
Confidence 99999998 679999998777776654
No 109
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=98.55 E-value=1.1e-06 Score=85.90 Aligned_cols=141 Identities=10% Similarity=0.024 Sum_probs=110.5
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEe
Q 017176 64 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKC 141 (376)
Q Consensus 64 ~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKi 141 (376)
..|+..++.+.+++.+++.++.+.+.||+.|.|++|| +++.-.+++++||+.+ ++++.|+.
T Consensus 134 ~v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiK~G~-----------------~~~~d~~~v~avR~a~g~~~~l~vDa 196 (378)
T 3eez_A 134 PRPIASSVGAKSVEETRAVIDRYRQRGYVAHSVKIGG-----------------DVERDIARIRDVEDIREPGEIVLYDV 196 (378)
T ss_dssp CEEBBCCBCSCCHHHHHHHHHHHHHTTCCEEEEECCS-----------------CHHHHHHHHHHHTTSCCTTCEEEEEC
T ss_pred eEEEEEEecCCCHHHHHHHHHHHHhCCCCEEEeccCC-----------------CHHHHHHHHHHHHHHcCCCceEEEEC
Confidence 3456667778899999999999989999999999876 3566788999999987 57899999
Q ss_pred cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHH
Q 017176 142 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE 221 (376)
Q Consensus 142 R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~d 221 (376)
.-+|+. ++.+++ ++.+++.|+ +|. . .++ +++.++++++.. ++||++++.+.++++
T Consensus 197 n~~~~~----~~a~~~-~~~l~~~~i-~iE----q------------P~~--~~~~~~~l~~~~-~iPIa~dE~~~~~~~ 251 (378)
T 3eez_A 197 NRGWTR----QQALRV-MRATEDLHV-MFE----Q------------PGE--TLDDIAAIRPLH-SAPVSVDECLVTLQD 251 (378)
T ss_dssp TTCCCH----HHHHHH-HHHTGGGTC-CEE----C------------CSS--SHHHHHHTGGGC-CCCEEECTTCCSHHH
T ss_pred CCCCCH----HHHHHH-HHHhccCCe-EEe----c------------CCC--CHHHHHHHHhhC-CCCEEECCCCCCHHH
Confidence 988864 344443 445677887 764 0 011 366677776654 899999999999999
Q ss_pred HHHHHH-cCcCeeEEchHHhhCCchh
Q 017176 222 VNAALR-KGAHHVMVGRAAYQNPWYT 246 (376)
Q Consensus 222 a~~~l~-~Gad~VmiGRa~l~~P~lf 246 (376)
+.++++ .++|.|++-.+.++.++-+
T Consensus 252 ~~~~l~~~~~d~v~ik~~~~GGit~~ 277 (378)
T 3eez_A 252 AARVARDGLAEVFGIKLNRVGGLTRA 277 (378)
T ss_dssp HHHHHHTTCCSEEEEEHHHHTSHHHH
T ss_pred HHHHHHcCCCCEEEeCchhcCCHHHH
Confidence 999998 6799999999888887754
No 110
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=98.54 E-value=2.2e-06 Score=83.51 Aligned_cols=139 Identities=9% Similarity=0.051 Sum_probs=106.1
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEe
Q 017176 64 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKC 141 (376)
Q Consensus 64 ~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKi 141 (376)
..|+...+.+.+++++.++|+++.+.||+.|.|++|+ +++...+++++||+.+ ++++.++.
T Consensus 135 ~vp~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~-----------------~~~~~~e~v~avr~a~g~~~~l~vDa 197 (371)
T 2ps2_A 135 RLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISG-----------------EPVTDAKRITAALANQQPDEFFIVDA 197 (371)
T ss_dssp CEEBEEEECSCCHHHHHHHHHHHHTTTCCEEEEECCS-----------------CHHHHHHHHHHHTTTCCTTCEEEEEC
T ss_pred ceEEEEEeCCCCHHHHHHHHHHHHHhChheEEeecCC-----------------CHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 3355556666789999999999999999999998763 3678889999999987 57888888
Q ss_pred cCCCCCCccHHHHHHHHHHHh-hcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHH
Q 017176 142 RIGVDDHDSYNQLCDFIYKVS-SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVD 220 (376)
Q Consensus 142 R~g~~~~~~~~~~~~~i~~~~-e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~ 220 (376)
.-+|+ .++.++++ +.+ ++.|+ +|. .. ++ +++..+++++.. ++||++++.+.+++
T Consensus 198 n~~~~----~~~a~~~~-~~l~~~~~i-~iE----~P------------~~--~~~~~~~l~~~~-~iPI~~dE~~~~~~ 252 (371)
T 2ps2_A 198 NGKLS----VETALRLL-RLLPHGLDF-ALE----AP------------CA--TWRECISLRRKT-DIPIIYDELATNEM 252 (371)
T ss_dssp TTBCC----HHHHHHHH-HHSCTTCCC-EEE----CC------------BS--SHHHHHHHHTTC-CSCEEESTTCCSHH
T ss_pred CCCcC----HHHHHHHH-HHHHhhcCC-cCc----CC------------cC--CHHHHHHHHhhC-CCCEEeCCCcCCHH
Confidence 77775 34555543 455 78888 764 00 01 377777777664 89999999999999
Q ss_pred HHHHHHH-cCcCeeEEchHHhhCCc
Q 017176 221 EVNAALR-KGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 221 da~~~l~-~Gad~VmiGRa~l~~P~ 244 (376)
+++++++ ..||.|++--.-++-..
T Consensus 253 ~~~~~i~~~~~d~v~ik~~~~GGit 277 (371)
T 2ps2_A 253 SIVKILADDAAEGIDLKISKAGGLT 277 (371)
T ss_dssp HHHHHHHHTCCSEEEEEHHHHTSHH
T ss_pred HHHHHHHhCCCCEEEechhhcCCHH
Confidence 9999998 67999999665555443
No 111
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=98.52 E-value=1.8e-06 Score=84.09 Aligned_cols=136 Identities=8% Similarity=0.046 Sum_probs=102.7
Q ss_pred ecCCCHHHHHHHHHHHHH-CCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCC
Q 017176 71 IGGSNLDNLAKATELANA-YNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDD 147 (376)
Q Consensus 71 L~g~~~~~~~~aa~~~~~-~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~ 147 (376)
+.+.+++.+.+.|+.+.+ .||+.|.|++|++ +++...+++++||+.+ ++++.+...-+|+
T Consensus 138 ~~~~~~e~~~~~a~~~~~~~Gf~~iKik~g~~----------------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~- 200 (370)
T 1nu5_A 138 LASGDTARDIDSALEMIETRRHNRFKVKLGAR----------------TPAQDLEHIRSIVKAVGDRASVRVDVNQGWD- 200 (370)
T ss_dssp ECSSCHHHHHHHHHHHHHTTSCSEEEEECSSS----------------CHHHHHHHHHHHHHHHGGGCEEEEECTTCCC-
T ss_pred ecCCCHHHHHHHHHHHHHhCCccEEEEecCCC----------------ChHHHHHHHHHHHHhcCCCCEEEEECCCCCC-
Confidence 344679999999999988 9999999998764 3456788899998876 4788888877775
Q ss_pred CccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH
Q 017176 148 HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR 227 (376)
Q Consensus 148 ~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~ 227 (376)
.++.+++ .+.+++.|+++|. . .+++.+++..+++++.. ++||++.+.+.+++++.++++
T Consensus 201 ---~~~a~~~-~~~l~~~~i~~iE----q------------P~~~~~~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~ 259 (370)
T 1nu5_A 201 ---EQTASIW-IPRLEEAGVELVE----Q------------PVPRANFGALRRLTEQN-GVAILADESLSSLSSAFELAR 259 (370)
T ss_dssp ---HHHHHHH-HHHHHHHTCCEEE----C------------CSCTTCHHHHHHHHHHC-SSEEEESTTCCSHHHHHHHHH
T ss_pred ---HHHHHHH-HHHHHhcCcceEe----C------------CCCcccHHHHHHHHHhC-CCCEEeCCCCCCHHHHHHHHH
Confidence 3444554 3456778999875 1 11223477778887765 899999999999999999998
Q ss_pred -cCcCeeEEchHHhhCCc
Q 017176 228 -KGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 228 -~Gad~VmiGRa~l~~P~ 244 (376)
..||.|++--.-++-.+
T Consensus 260 ~~~~d~v~ik~~~~GGit 277 (370)
T 1nu5_A 260 DHAVDAFSLKLCNMGGIA 277 (370)
T ss_dssp TTCCSEEEECHHHHTSHH
T ss_pred hCCCCEEEEchhhcCCHH
Confidence 56999999555544443
No 112
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.52 E-value=1.6e-07 Score=86.34 Aligned_cols=82 Identities=21% Similarity=0.242 Sum_probs=63.8
Q ss_pred HHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchH
Q 017176 159 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 238 (376)
Q Consensus 159 ~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa 238 (376)
++.++++|+|+|+++..+....+ ....++.++++++. .++||+++|+|.+++++.++++.|||+|++|++
T Consensus 36 a~~~~~~Gad~i~v~d~~~~~~~---------~~~~~~~i~~i~~~-~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~ 105 (253)
T 1thf_D 36 GKFYSEIGIDELVFLDITASVEK---------RKTMLELVEKVAEQ-IDIPFTVGGGIHDFETASELILRGADKVSINTA 105 (253)
T ss_dssp HHHHHHTTCCEEEEEESSCSSSH---------HHHHHHHHHHHHTT-CCSCEEEESSCCSHHHHHHHHHTTCSEEEESHH
T ss_pred HHHHHHcCCCEEEEECCchhhcC---------CcccHHHHHHHHHh-CCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 34567899999999975532111 11235677777765 489999999999999999999999999999999
Q ss_pred HhhCCchhhHhh
Q 017176 239 AYQNPWYTLGHV 250 (376)
Q Consensus 239 ~l~~P~lf~~~~ 250 (376)
++.+|+++.+.+
T Consensus 106 ~l~~p~~~~~~~ 117 (253)
T 1thf_D 106 AVENPSLITQIA 117 (253)
T ss_dssp HHHCTHHHHHHH
T ss_pred HHhChHHHHHHH
Confidence 999999764433
No 113
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=98.49 E-value=2.9e-06 Score=82.48 Aligned_cols=140 Identities=9% Similarity=0.011 Sum_probs=105.6
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecC
Q 017176 66 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRI 143 (376)
Q Consensus 66 p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~ 143 (376)
|+...+.+.+++++.+.|+.+.+.||+.|.+++||+ +++...+++++||+.+ ++++.+...-
T Consensus 131 ~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~----------------~~~~d~~~v~avr~a~g~~~~l~vDan~ 194 (366)
T 1tkk_A 131 ETDYTVSVNSPEEMAADAENYLKQGFQTLKIKVGKD----------------DIATDIARIQEIRKRVGSAVKLRLDANQ 194 (366)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSS----------------CHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred eeeEEecCCCHHHHHHHHHHHHHcCCCeEEEEeCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 344566667899999999998889999999988752 4677888999999876 5788898887
Q ss_pred CCCCCccHHHHHHHHHHHhhc--CCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHH
Q 017176 144 GVDDHDSYNQLCDFIYKVSSL--SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE 221 (376)
Q Consensus 144 g~~~~~~~~~~~~~i~~~~e~--~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~d 221 (376)
+|+ .++.++++ +.+++ .|+++|. . .+++.+++..+++.+.. ++||++++.+.++++
T Consensus 195 ~~~----~~~a~~~~-~~l~~~~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~ 252 (366)
T 1tkk_A 195 GWR----PKEAVTAI-RKMEDAGLGIELVE--------Q--------PVHKDDLAGLKKVTDAT-DTPIMADESVFTPRQ 252 (366)
T ss_dssp CSC----HHHHHHHH-HHHHHTTCCEEEEE--------C--------CSCTTCHHHHHHHHHHC-SSCEEECTTCCSHHH
T ss_pred CCC----HHHHHHHH-HHHhhcCCCceEEE--------C--------CCCcccHHHHHHHHhhC-CCCEEEcCCCCCHHH
Confidence 775 33445543 44677 8888774 1 11233477777887765 899999999999999
Q ss_pred HHHHHH-cCcCeeEEchHHhhCC
Q 017176 222 VNAALR-KGAHHVMVGRAAYQNP 243 (376)
Q Consensus 222 a~~~l~-~Gad~VmiGRa~l~~P 243 (376)
+.++++ ..+|.|++--.-.+-.
T Consensus 253 ~~~~i~~~~~d~v~ik~~~~GGi 275 (366)
T 1tkk_A 253 AFEVLQTRSADLINIKLMKAGGI 275 (366)
T ss_dssp HHHHHHHTCCSEEEECHHHHTSH
T ss_pred HHHHHHhCCCCEEEeehhhhcCH
Confidence 999998 6799999955444443
No 114
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=98.48 E-value=2.4e-06 Score=83.84 Aligned_cols=133 Identities=8% Similarity=0.035 Sum_probs=102.5
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCcc
Q 017176 73 GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDS 150 (376)
Q Consensus 73 g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~ 150 (376)
+.++++|.++|+++.+.||+.|.|+.|+. .++...+++++||+.+ ++++.++..-+|+
T Consensus 147 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~----------------~~~~~~e~v~avR~a~G~d~~l~vDan~~~~---- 206 (391)
T 2qgy_A 147 KKDTNDYLRQIEKFYGKKYGGIKIYPMLD----------------SLSISIQFVEKVREIVGDELPLMLDLAVPED---- 206 (391)
T ss_dssp CCCHHHHHHHHHHHHHTTCSCEEECCCCS----------------SHHHHHHHHHHHHHHHCSSSCEEEECCCCSC----
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccCCC----------------hHHHHHHHHHHHHHHhCCCCEEEEEcCCCCC----
Confidence 46899999999999999999999987621 1688889999999977 6889999887775
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cC
Q 017176 151 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KG 229 (376)
Q Consensus 151 ~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~G 229 (376)
.++.+++ .+.+++.|+++|.- .+++.+++..+++++.. ++||++.+.+.++++++++++ ..
T Consensus 207 ~~~a~~~-~~~l~~~~i~~iEq----------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~ 268 (391)
T 2qgy_A 207 LDQTKSF-LKEVSSFNPYWIEE----------------PVDGENISLLTEIKNTF-NMKVVTGEKQSGLVHFRELISRNA 268 (391)
T ss_dssp HHHHHHH-HHHHGGGCCSEEEC----------------SSCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHTTC
T ss_pred HHHHHHH-HHHHHhcCCCeEeC----------------CCChhhHHHHHHHHhhC-CCCEEEcCCcCCHHHHHHHHHcCC
Confidence 3455554 34567899998751 01223477778887765 899999999999999999998 56
Q ss_pred cCeeEEchHHhhCC
Q 017176 230 AHHVMVGRAAYQNP 243 (376)
Q Consensus 230 ad~VmiGRa~l~~P 243 (376)
||.|++-..-++.+
T Consensus 269 ~d~v~ik~~~~GGi 282 (391)
T 2qgy_A 269 ADIFNPDISGMGGL 282 (391)
T ss_dssp CSEECCBTTTSSCH
T ss_pred CCEEEECcchhCCH
Confidence 99999854444443
No 115
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=98.48 E-value=2.6e-06 Score=83.58 Aligned_cols=137 Identities=9% Similarity=0.059 Sum_probs=105.4
Q ss_pred CCEEEEe-c-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEE
Q 017176 65 HPIVLQI-G-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVK 140 (376)
Q Consensus 65 ~p~~vQL-~-g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vK 140 (376)
.|+-..+ . +.+++++++.++.+.+.||+.|.|+.|| +++.-.+++++||+.+ ++++.|+
T Consensus 139 v~~y~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiKvG~-----------------~~~~d~~~v~avR~a~g~d~~l~vD 201 (389)
T 3ozy_A 139 VRAYASSIYWDLTPDQAADELAGWVEQGFTAAKLKVGR-----------------APRKDAANLRAMRQRVGADVEILVD 201 (389)
T ss_dssp EEEEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEECCS-----------------CHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred eeeEEecCCCCCCHHHHHHHHHHHHHCCCCEEeeccCC-----------------CHHHHHHHHHHHHHHcCCCceEEEE
Confidence 4666666 4 6789999999999999999999999876 4677788999999886 6789999
Q ss_pred ecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHH-hhCCCCeEEEecCCCCH
Q 017176 141 CRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALL-RDFPDLTFTLNGGINTV 219 (376)
Q Consensus 141 iR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~-~~~~~ipVi~nGgI~s~ 219 (376)
..-+|+. ++.+++ .+.+++.|+++|. . .+++.+++.+++++ +. .++||++++.+.++
T Consensus 202 an~~~~~----~~A~~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~~iPIa~dE~i~~~ 259 (389)
T 3ozy_A 202 ANQSLGR----HDALAM-LRILDEAGCYWFE----E------------PLSIDDIEGHRILRAQG-TPVRIATGENLYTR 259 (389)
T ss_dssp CTTCCCH----HHHHHH-HHHHHHTTCSEEE----S------------CSCTTCHHHHHHHHTTC-CSSEEEECTTCCHH
T ss_pred CCCCcCH----HHHHHH-HHHHHhcCCCEEE----C------------CCCcccHHHHHHHHhcC-CCCCEEeCCCCCCH
Confidence 8888863 344443 4456789999885 1 11223477777877 55 48999999999999
Q ss_pred HHHHHHHH-cCcCeeEEchHHh
Q 017176 220 DEVNAALR-KGAHHVMVGRAAY 240 (376)
Q Consensus 220 ~da~~~l~-~Gad~VmiGRa~l 240 (376)
+++.++++ ..+|.|++--+-.
T Consensus 260 ~~~~~~i~~~~~d~v~ik~~~~ 281 (389)
T 3ozy_A 260 NAFNDYIRNDAIDVLQADASRA 281 (389)
T ss_dssp HHHHHHHHTTCCSEECCCTTTS
T ss_pred HHHHHHHHcCCCCEEEeCcccc
Confidence 99999998 6799998844433
No 116
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.47 E-value=5.6e-06 Score=77.05 Aligned_cols=62 Identities=15% Similarity=0.151 Sum_probs=50.2
Q ss_pred cHHHHHHHHhhCC-CCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhC
Q 017176 194 KYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYG 256 (376)
Q Consensus 194 ~~~~v~~~~~~~~-~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g 256 (376)
+++...++++..+ ++|||+-|||.|++|+.++.+.|||+|.||.+++..++. ...+...+.|
T Consensus 206 dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~almr~~d~-~~~~~~l~~g 268 (272)
T 3tsm_A 206 NLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMRQHDV-AAATRALLTG 268 (272)
T ss_dssp CTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEECHHHHTSSCH-HHHHHHHHHC
T ss_pred ChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHcCCcCH-HHHHHHHHhc
Confidence 3566667777665 699999999999999999999999999999999999886 4444444444
No 117
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=98.46 E-value=8.2e-07 Score=82.33 Aligned_cols=156 Identities=13% Similarity=0.083 Sum_probs=98.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCC--HHHHHHHHHHHhcccCccEEEEecCCCCCC----
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLD--PKFVGEAMSVIAANTNVPVSVKCRIGVDDH---- 148 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~--~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~---- 148 (376)
.+++..+.++.+.+.|.|+|.|- . .--. .+.+.++++++++.+++|+.+|..+++.+.
T Consensus 51 ~~~~~~~~~~~~~~sGtDai~VG-S---------------~~vt~~~~~~~~~v~~ik~~~~lPvil~fPP~~g~~~~i~ 114 (286)
T 3vk5_A 51 PVTEAVEKAAELTRLGFAAVLLA-S---------------TDYESFESHMEPYVAAVKAATPLPVVLHFPPRPGAGFPVV 114 (286)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEE-C---------------SCCSSHHHHHHHHHHHHHHHCSSCEEEECCCBTTTBSCCC
T ss_pred CcHHHHHHHHHHHhcCCCEEEEc-c---------------CCCCcchHHHHHHHHHHHHhCCCCEEEECCCCCCCccccc
Confidence 46777778888889999999884 1 1112 478899999999988999999877322110
Q ss_pred --------------ccHHHHHHH-----HHHHh----hcCC----ccEEEEccC-cc-ccCCCCCCCCCCC---------
Q 017176 149 --------------DSYNQLCDF-----IYKVS----SLSP----TRHFIIHSR-KA-LLNGISPAENRTI--------- 190 (376)
Q Consensus 149 --------------~~~~~~~~~-----i~~~~----e~~G----vd~I~vh~r-~~-~~~g~~~~~~~~~--------- 190 (376)
.+..=+... .+.++ ++.| -.+|.|..+ +. ..-+..+.+...+
T Consensus 115 ~~aDa~l~psvlNs~n~~~i~g~~~~~~aa~~v~~~~~~~ge~ip~gYL~v~~g~k~V~fv~~~~~~~~e~A~~~aYa~~ 194 (286)
T 3vk5_A 115 RGADALLLPALLGSGDDYFVWKSFLETLAAFPGRIPREEWPELLLTVALTFGEDPRTGDLLGTVPVSTASTEEIDRYLHV 194 (286)
T ss_dssp TTCSEEEEEEETTBSSHHHHTHHHHHHHHHCSTTSCGGGCCEEEEEEEEECSCCHHHHHHHCBCCCCCSSSHHHHHHHHH
T ss_pred cCCCEEEEEEEecCCCcccccCcHHHHHHhHHHHHHHHHhCCcceEEEEEECCCCceeeeeCCCCCCCHHHHHHHHHHHH
Confidence 111111111 01112 3344 234455544 11 0001000000000
Q ss_pred ---------------CcccHHHHHHHHhhCC-CCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhC--Cchh
Q 017176 191 ---------------PPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN--PWYT 246 (376)
Q Consensus 191 ---------------~~~~~~~v~~~~~~~~-~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~--P~lf 246 (376)
.+...+.++++++... ++||++-|||+|.++++++++.|||+|.+|++++.| |.++
T Consensus 195 gad~G~~lV~LD~~~~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~d~~Pelv 268 (286)
T 3vk5_A 195 ARAFGFHMVYLYSRNEHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQPDWRSAL 268 (286)
T ss_dssp HHHTTCSEEEEECSSSCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSSTTHHHHH
T ss_pred HHHcCCCEEEEcCCCCcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhcCCCHHHH
Confidence 2334567777777643 799999999999999999999999999999999999 6654
No 118
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.45 E-value=1.5e-06 Score=81.10 Aligned_cols=52 Identities=15% Similarity=0.218 Sum_probs=44.7
Q ss_pred cHHHHHHHHhhCC-CCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCch
Q 017176 194 KYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 194 ~~~~v~~~~~~~~-~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
+++.+.++.+..+ ++|||+.|||.|++|+.++++.|||+|.||++++..+..
T Consensus 199 dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~GadgvlVGsal~~a~dp 251 (272)
T 3qja_A 199 DRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSGDP 251 (272)
T ss_dssp CTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEECHHHHTCSCH
T ss_pred CHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEEEcHHHhCCCCH
Confidence 3555667776665 799999999999999999999999999999999987764
No 119
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=98.44 E-value=2.9e-06 Score=83.79 Aligned_cols=133 Identities=12% Similarity=0.107 Sum_probs=102.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecC----CCCCccccCCCCcccccc--CCHHHHHHHHHHHhccc--CccEEEEecCCCC
Q 017176 75 NLDNLAKATELANAYNYDEINLNC----GCPSPKVAGHGCFGVSLM--LDPKFVGEAMSVIAANT--NVPVSVKCRIGVD 146 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~----gcP~~~v~r~g~yG~~l~--~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~ 146 (376)
+++.+.+.|+++.+.||+.|.++. |+... . ||+++. ++++...+++++||+.+ ++++.+...-+|+
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~-----~-~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan~~~~ 222 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHR-----D-FWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMHGRFD 222 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCS-----C-SSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccC-----C-cCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCC
Confidence 789999999999999999999998 54321 1 566776 47788999999999987 5778887766664
Q ss_pred CCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHH
Q 017176 147 DHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL 226 (376)
Q Consensus 147 ~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l 226 (376)
.++.++++ +.+++.|+++|.- .+++.+++..+++.+.. ++||++.+.+.+++++++++
T Consensus 223 ----~~~a~~~~-~~l~~~~i~~iEe----------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i 280 (410)
T 2qq6_A 223 ----IPSSIRFA-RAMEPFGLLWLEE----------------PTPPENLDALAEVRRST-STPICAGENVYTRFDFRELF 280 (410)
T ss_dssp ----HHHHHHHH-HHHGGGCCSEEEC----------------CSCTTCHHHHHHHHTTC-SSCEEECTTCCSHHHHHHHH
T ss_pred ----HHHHHHHH-HHHhhcCCCeEEC----------------CCChhhHHHHHHHHhhC-CCCEEeCCCcCCHHHHHHHH
Confidence 44555554 4567899998761 01223477777877664 89999999999999999999
Q ss_pred H-cCcCeeEE
Q 017176 227 R-KGAHHVMV 235 (376)
Q Consensus 227 ~-~Gad~Vmi 235 (376)
+ ..+|.|++
T Consensus 281 ~~~~~d~v~i 290 (410)
T 2qq6_A 281 AKRAVDYVMP 290 (410)
T ss_dssp HTTCCSEECC
T ss_pred HcCCCCEEec
Confidence 8 56899887
No 120
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.42 E-value=5.5e-06 Score=77.13 Aligned_cols=166 Identities=15% Similarity=0.160 Sum_probs=101.0
Q ss_pred CCCEEEEecCCCH--HHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCcccccc----------CCHHHHHHHHHHHhc
Q 017176 64 QHPIVLQIGGSNL--DNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLM----------LDPKFVGEAMSVIAA 131 (376)
Q Consensus 64 ~~p~~vQL~g~~~--~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~----------~~~~~~~eiv~~v~~ 131 (376)
...++.-|...+| +...+.++.++++|+|.|||+. |...-.- | |-... -+.....++++++++
T Consensus 16 ~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~--P~sdp~~-D--G~~i~~a~~~al~~G~~~~~~~~~v~~ir~ 90 (268)
T 1qop_A 16 EGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGV--PFSDPLA-D--GPTIQNANLRAFAAGVTPAQCFEMLAIIRE 90 (268)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEEC--CCSCCTT-C--CHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECC--CCCCccC-C--CHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 3446666766665 8889999999999999999964 3321000 0 11111 245667799999998
Q ss_pred c-cCccEEEEecCCCCC--CccHHHHHHHHHHHhhcCCccEEEEccCccc------------------------------
Q 017176 132 N-TNVPVSVKCRIGVDD--HDSYNQLCDFIYKVSSLSPTRHFIIHSRKAL------------------------------ 178 (376)
Q Consensus 132 ~-~~~pv~vKiR~g~~~--~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~------------------------------ 178 (376)
. +++|+.+=.- ++. ....++. +.. +.++|+|.+++|.-...
T Consensus 91 ~~~~~Pv~lm~y--~n~v~~~g~~~~---~~~-~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~ 164 (268)
T 1qop_A 91 KHPTIPIGLLMY--ANLVFNNGIDAF---YAR-CEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLR 164 (268)
T ss_dssp HCSSSCEEEEEC--HHHHHTTCHHHH---HHH-HHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHH
T ss_pred cCCCCCEEEEEc--ccHHHHhhHHHH---HHH-HHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Confidence 8 7899766110 110 0011222 222 23467777766532100
Q ss_pred --------------cCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhC
Q 017176 179 --------------LNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 242 (376)
Q Consensus 179 --------------~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 242 (376)
..|.++... ...+...+.+.++++. .++||+..|||.|++++.+++..|||+|.+|+++...
T Consensus 165 ~i~~~~~g~v~~~s~~G~tG~~~-~~~~~~~~~i~~lr~~-~~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~~~ 240 (268)
T 1qop_A 165 QVASYGRGYTYLLSRSGVTGAEN-RGALPLHHLIEKLKEY-HAAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVKI 240 (268)
T ss_dssp HHHHHCCSCEEEESSSSCCCSSS-CC--CCHHHHHHHHHT-TCCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred HHHhhCCCcEEEEecCCcCCCcc-CCCchHHHHHHHHHhc-cCCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHhhh
Confidence 001111110 1112225677777765 4899999999999999999999999999999998643
No 121
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=98.42 E-value=3.8e-06 Score=82.74 Aligned_cols=135 Identities=15% Similarity=0.068 Sum_probs=100.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecC------CCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCC
Q 017176 75 NLDNLAKATELANAYNYDEINLNC------GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVD 146 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~------gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~ 146 (376)
++++|.+.|+++.+.||+.|.|+. |++... ... |...+++++...+++++||+.+ ++++.+...-+|+
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s---~~~-g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~~~~ 221 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGV---FLE-GPLPSETIKIGVERVEAIRNAVGPDVDIIVENHGHTD 221 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTC---CCS-SSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccC---ccc-CCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCCCCC
Confidence 899999999999999999999996 654221 111 3223457788999999999977 5788888877764
Q ss_pred CCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHH
Q 017176 147 DHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL 226 (376)
Q Consensus 147 ~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l 226 (376)
.++.++++ +.+++.|+++|.- .+++.+++..+++++.. ++||++.+.+.+++++++++
T Consensus 222 ----~~~ai~~~-~~l~~~~i~~iE~----------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i 279 (403)
T 2ox4_A 222 ----LVSAIQFA-KAIEEFNIFFYEE----------------INTPLNPRLLKEAKKKI-DIPLASGERIYSRWGFLPFL 279 (403)
T ss_dssp ----HHHHHHHH-HHHGGGCEEEEEC----------------CSCTTSTHHHHHHHHTC-CSCEEECTTCCHHHHHHHHH
T ss_pred ----HHHHHHHH-HHHHhhCCCEEeC----------------CCChhhHHHHHHHHHhC-CCCEEecCCcCCHHHHHHHH
Confidence 34555554 4567889988751 01223467777777764 89999999999999999999
Q ss_pred H-cCcCeeEE
Q 017176 227 R-KGAHHVMV 235 (376)
Q Consensus 227 ~-~Gad~Vmi 235 (376)
+ ..+|.|++
T Consensus 280 ~~~~~d~v~i 289 (403)
T 2ox4_A 280 EDRSIDVIQP 289 (403)
T ss_dssp HTTCCSEECC
T ss_pred HcCCCCEEec
Confidence 8 56999887
No 122
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.42 E-value=2.5e-06 Score=79.34 Aligned_cols=167 Identities=14% Similarity=0.119 Sum_probs=98.3
Q ss_pred CCCEEEEecCCCH--HHHHHHHHHHHHCCCCEEEecC--CCCCcc---ccC----CCCccccccCCHHHHHHHHHHHhcc
Q 017176 64 QHPIVLQIGGSNL--DNLAKATELANAYNYDEINLNC--GCPSPK---VAG----HGCFGVSLMLDPKFVGEAMSVIAAN 132 (376)
Q Consensus 64 ~~p~~vQL~g~~~--~~~~~aa~~~~~~G~d~IeiN~--gcP~~~---v~r----~g~yG~~l~~~~~~~~eiv~~v~~~ 132 (376)
...++.-|...+| +.+.+.++.++++|+|.|||.. +-|... +.+ .=..| -+.+.+.++++++|+.
T Consensus 17 ~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G----~~~~~~~~~v~~ir~~ 92 (267)
T 3vnd_A 17 KGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAG----TTSSDCFDIITKVRAQ 92 (267)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTT----CCHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcC----CCHHHHHHHHHHHHhc
Confidence 4456777766555 8999999999999999999974 333210 000 00013 3567788999999987
Q ss_pred -cCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEcc--------------------------Ccc--------
Q 017176 133 -TNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHS--------------------------RKA-------- 177 (376)
Q Consensus 133 -~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~--------------------------r~~-------- 177 (376)
+++|+.+-.-.+.-....+++.++ .+.++|+|.++++- .+.
T Consensus 93 ~~~~Pivlm~Y~npv~~~g~e~f~~----~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~ 168 (267)
T 3vnd_A 93 HPDMPIGLLLYANLVFANGIDEFYT----KAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVS 168 (267)
T ss_dssp CTTCCEEEEECHHHHHHHCHHHHHH----HHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHH
T ss_pred CCCCCEEEEecCcHHHHhhHHHHHH----HHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHH
Confidence 788987642110000000122211 12234555554431 110
Q ss_pred ----------ccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHh
Q 017176 178 ----------LLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAY 240 (376)
Q Consensus 178 ----------~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l 240 (376)
...|..+.. ...++...+.+.++++. .++||+..|||.+++++.+.+..|||+|.+|++++
T Consensus 169 ~~~~gfvY~vS~~GvTG~~-~~~~~~~~~~v~~vr~~-~~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSaiv 239 (267)
T 3vnd_A 169 EQGEGYTYLLSRAGVTGTE-SKAGEPIENILTQLAEF-NAPPPLLGFGIAEPEQVRAAIKAGAAGAISGSAVV 239 (267)
T ss_dssp HHCCSCEEESCCCCCC---------CHHHHHHHHHTT-TCCCEEECSSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred HhCCCcEEEEecCCCCCCc-cCCcHHHHHHHHHHHHh-cCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHH
Confidence 001211211 11122224566676654 58999999999999999988989999999999876
No 123
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.41 E-value=3e-06 Score=75.81 Aligned_cols=152 Identities=15% Similarity=0.237 Sum_probs=89.5
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCcc-ccC--CCCccccc------cCCHHHHHHHHHHH----
Q 017176 63 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPK-VAG--HGCFGVSL------MLDPKFVGEAMSVI---- 129 (376)
Q Consensus 63 ~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~-v~r--~g~yG~~l------~~~~~~~~eiv~~v---- 129 (376)
.+.|++..|.+.+++++.+.++.+.+.|++.|++...+|... ..+ +..|+..+ ..+++.+...++.=
T Consensus 5 ~~~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V 84 (212)
T 2v82_A 5 TKLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLI 84 (212)
T ss_dssp SSSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTSTTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEE
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEE
Confidence 467899999999999999999999999999999987665310 000 00011110 11222221111100
Q ss_pred ------------hcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHH
Q 017176 130 ------------AANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 197 (376)
Q Consensus 130 ------------~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~ 197 (376)
++..+.++.+ |. .+.+++. + ..+.|+|+|.++... +..++.
T Consensus 85 ~~~~~~~~~~~~~~~~g~~~~~----g~---~t~~e~~----~-a~~~G~d~v~v~~t~---------------~~g~~~ 137 (212)
T 2v82_A 85 VTPNIHSEVIRRAVGYGMTVCP----GC---ATATEAF----T-ALEAGAQALKIFPSS---------------AFGPQY 137 (212)
T ss_dssp ECSSCCHHHHHHHHHTTCEEEC----EE---CSHHHHH----H-HHHTTCSEEEETTHH---------------HHCHHH
T ss_pred EeCCCCHHHHHHHHHcCCCEEe----ec---CCHHHHH----H-HHHCCCCEEEEecCC---------------CCCHHH
Confidence 0000111110 10 1122211 1 123566666653311 112567
Q ss_pred HHHHHhhCC-CCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhC
Q 017176 198 YYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 242 (376)
Q Consensus 198 v~~~~~~~~-~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 242 (376)
+.++++..+ ++||++.|||. .+++.++++.|||+|.+|++++..
T Consensus 138 ~~~l~~~~~~~ipvia~GGI~-~~~i~~~~~~Ga~gv~vGsai~~~ 182 (212)
T 2v82_A 138 IKALKAVLPSDIAVFAVGGVT-PENLAQWIDAGCAGAGLGSDLYRA 182 (212)
T ss_dssp HHHHHTTSCTTCEEEEESSCC-TTTHHHHHHHTCSEEEECTTTCCT
T ss_pred HHHHHHhccCCCeEEEeCCCC-HHHHHHHHHcCCCEEEEChHHhCC
Confidence 777777654 59999999997 999999999999999999999865
No 124
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.41 E-value=5.1e-07 Score=82.98 Aligned_cols=79 Identities=15% Similarity=0.209 Sum_probs=61.6
Q ss_pred HHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHH
Q 017176 160 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAA 239 (376)
Q Consensus 160 ~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~ 239 (376)
+.++++|+|+|.++.......+ ....++.+.++++. .++||+++|+|.+.++++++++.|||+|++|+++
T Consensus 38 ~~~~~~Gad~i~v~d~~~~~~~---------~~~~~~~i~~i~~~-~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~ 107 (252)
T 1ka9_F 38 RAYDEAGADELVFLDISATHEE---------RAILLDVVARVAER-VFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAA 107 (252)
T ss_dssp HHHHHHTCSCEEEEECCSSTTC---------HHHHHHHHHHHHTT-CCSCEEEESSCCSHHHHHHHHHHTCSEEEECHHH
T ss_pred HHHHHcCCCEEEEEcCCccccC---------ccccHHHHHHHHHh-CCCCEEEECCcCCHHHHHHHHHcCCCEEEEChHH
Confidence 4456799999999854421111 11235667777776 4899999999999999999999999999999999
Q ss_pred hhCCchhhH
Q 017176 240 YQNPWYTLG 248 (376)
Q Consensus 240 l~~P~lf~~ 248 (376)
+.+|+++.+
T Consensus 108 l~~p~~~~~ 116 (252)
T 1ka9_F 108 VRRPELIRE 116 (252)
T ss_dssp HHCTHHHHH
T ss_pred HhCcHHHHH
Confidence 999997543
No 125
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=98.40 E-value=4.3e-06 Score=82.11 Aligned_cols=123 Identities=15% Similarity=0.117 Sum_probs=96.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 152 (376)
++++|.++|+++.+.||+.|.|+.|- .++++..+++++||+.+ ++++.+...-+|+ .+
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~~~~e~v~avR~avg~d~~l~vDan~~~~----~~ 221 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQ----------------PDGALDIARVTAVRKHLGDAVPLMVDANQQWD----RP 221 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCC----------------SCHHHHHHHHHHHHHHHCTTSCEEEECTTCCC----HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC----------------CCHHHHHHHHHHHHHHcCCCCEEEEECCCCCC----HH
Confidence 89999999999999999999997651 24788899999999986 5788888777764 34
Q ss_pred HHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcC
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAH 231 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad 231 (376)
+.++++ +.+++.|+++|.- .+++.+++..+++++.. ++||++.+.+.++++++++++ ..||
T Consensus 222 ~a~~~~-~~l~~~~i~~iE~----------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d 283 (393)
T 2og9_A 222 TAQRMC-RIFEPFNLVWIEE----------------PLDAYDHEGHAALALQF-DTPIATGEMLTSAAEHGDLIRHRAAD 283 (393)
T ss_dssp HHHHHH-HHHGGGCCSCEEC----------------CSCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHTTCCS
T ss_pred HHHHHH-HHHHhhCCCEEEC----------------CCCcccHHHHHHHHHhC-CCCEEeCCCcCCHHHHHHHHHCCCCC
Confidence 555554 4567889998750 01223477777887765 899999999999999999998 5699
Q ss_pred eeEE
Q 017176 232 HVMV 235 (376)
Q Consensus 232 ~Vmi 235 (376)
.|++
T Consensus 284 ~v~i 287 (393)
T 2og9_A 284 YLMP 287 (393)
T ss_dssp EECC
T ss_pred EEee
Confidence 9987
No 126
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.37 E-value=8.3e-07 Score=81.13 Aligned_cols=81 Identities=22% Similarity=0.253 Sum_probs=63.5
Q ss_pred HHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHH
Q 017176 160 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAA 239 (376)
Q Consensus 160 ~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~ 239 (376)
+.++++|+++|+++..+....+. .. .+.++++++.. ++||+++|+|.++++++.+++.|||+|.+|+++
T Consensus 38 ~~~~~~Gad~i~v~~~d~~~~~~---------~~-~~~i~~i~~~~-~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~ 106 (244)
T 2y88_A 38 LGWQRDGAEWIHLVDLDAAFGRG---------SN-HELLAEVVGKL-DVQVELSGGIRDDESLAAALATGCARVNVGTAA 106 (244)
T ss_dssp HHHHHTTCSEEEEEEHHHHTTSC---------CC-HHHHHHHHHHC-SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHcCCCEEEEEcCcccccCC---------Ch-HHHHHHHHHhc-CCcEEEECCCCCHHHHHHHHHcCCCEEEECchH
Confidence 34567999999998755322211 11 26677887765 899999999999999999999999999999999
Q ss_pred hhCCchhhHhhh
Q 017176 240 YQNPWYTLGHVD 251 (376)
Q Consensus 240 l~~P~lf~~~~~ 251 (376)
+.+|+++.+.++
T Consensus 107 l~~p~~~~~~~~ 118 (244)
T 2y88_A 107 LENPQWCARVIG 118 (244)
T ss_dssp HHCHHHHHHHHH
T ss_pred hhChHHHHHHHH
Confidence 999987644333
No 127
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=98.35 E-value=1.5e-05 Score=78.02 Aligned_cols=124 Identities=9% Similarity=-0.022 Sum_probs=95.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 152 (376)
+++++.+.|+++.+.||+.|.|+.|+ .+++...+++++||+.+ ++++.+...-+|+ .+
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~~~~e~v~avR~a~G~~~~l~vDan~~~~----~~ 204 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGH----------------RDFDRDLRRLELLKTCVPAGSKVMIDPNEAWT----SK 204 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCC----------------SSHHHHHHHHHHHHTTSCTTCEEEEECTTCBC----HH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCC----------------CCHHHHHHHHHHHHHhhCCCCeEEEECCCCCC----HH
Confidence 79999999999999999999999775 24567789999999987 5788888777775 34
Q ss_pred HHHHHHHHHhhc--CCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cC
Q 017176 153 QLCDFIYKVSSL--SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KG 229 (376)
Q Consensus 153 ~~~~~i~~~~e~--~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~G 229 (376)
+.++++ +.+++ .++++|. . .+++.+++..+++++...++||++.+.+ ++++++++++ ..
T Consensus 205 ~a~~~~-~~l~~~g~~i~~iE----q------------P~~~~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~ 266 (389)
T 2oz8_A 205 EALTKL-VAIREAGHDLLWVE----D------------PILRHDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAHA 266 (389)
T ss_dssp HHHHHH-HHHHHTTCCCSEEE----S------------CBCTTCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTTC
T ss_pred HHHHHH-HHHHhcCCCceEEe----C------------CCCCcCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcCC
Confidence 555544 44667 6777653 0 1122347777777776327999999999 9999999998 56
Q ss_pred cCeeEEc
Q 017176 230 AHHVMVG 236 (376)
Q Consensus 230 ad~VmiG 236 (376)
||.|++.
T Consensus 267 ~d~v~ik 273 (389)
T 2oz8_A 267 ADILNVH 273 (389)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 9999997
No 128
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=98.35 E-value=7e-06 Score=80.67 Aligned_cols=123 Identities=10% Similarity=0.087 Sum_probs=96.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccH
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~ 151 (376)
.+++.+.+.|+++.+.||+.|.|+.|+ +++...+++++||+.+ ++++.+...-+|+ .
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~vKik~g~-----------------~~~~~~e~v~avR~a~g~d~~l~vDan~~~~----~ 202 (397)
T 2qde_A 144 GEPEAVAEEALAVLREGFHFVKLKAGG-----------------PLKADIAMVAEVRRAVGDDVDLFIDINGAWT----Y 202 (397)
T ss_dssp SCHHHHHHHHHHHHHHTCSCEEEECCS-----------------CHHHHHHHHHHHHHHHCTTSCEEEECTTCCC----H
T ss_pred CCHHHHHHHHHHHHHhhhhheeecccC-----------------CHHHHHHHHHHHHHhhCCCCEEEEECCCCCC----H
Confidence 689999999999988999999998652 4577889999999886 5788888777764 3
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCc
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGA 230 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Ga 230 (376)
++.+++ .+.+++.|+++|. . .+++.+++..+++++.. ++||++.+.+.++++++++++ ..+
T Consensus 203 ~~a~~~-~~~l~~~~i~~iE----q------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~ 264 (397)
T 2qde_A 203 DQALTT-IRALEKYNLSKIE----Q------------PLPAWDLDGMARLRGKV-ATPIYADESAQELHDLLAIINKGAA 264 (397)
T ss_dssp HHHHHH-HHHHGGGCCSCEE----C------------CSCTTCHHHHHHHHTTC-SSCEEESTTCCSHHHHHHHHHHTCC
T ss_pred HHHHHH-HHHHHhCCCCEEE----C------------CCChhhHHHHHHHHhhC-CCCEEEeCCcCCHHHHHHHHHcCCC
Confidence 455554 4466788998875 1 11223477777877664 899999999999999999998 669
Q ss_pred CeeEE
Q 017176 231 HHVMV 235 (376)
Q Consensus 231 d~Vmi 235 (376)
|.|++
T Consensus 265 d~v~i 269 (397)
T 2qde_A 265 DGLMI 269 (397)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99998
No 129
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=98.34 E-value=6.6e-06 Score=81.31 Aligned_cols=143 Identities=10% Similarity=0.057 Sum_probs=107.1
Q ss_pred CCEEEE-ecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEe
Q 017176 65 HPIVLQ-IGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKC 141 (376)
Q Consensus 65 ~p~~vQ-L~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKi 141 (376)
.|+-.. +...+++.+++.|+.+.+.||+.|.|++|+... + |+ ++++...+++++||+.+ ++++.|..
T Consensus 168 v~~y~s~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~-----d--g~---~~~~~die~v~avReavG~d~~L~vDa 237 (412)
T 3stp_A 168 IPVYYSKLYAGSIEAMQKEAEEAMKGGYKAFKSRFGYGPK-----D--GM---PGMRENLKRVEAVREVIGYDNDLMLEC 237 (412)
T ss_dssp EEEEEECCCSCCHHHHHHHHHHHHTTTCSEEEEECCCCGG-----G--HH---HHHHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred EEEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEecccCcc-----c--cc---chHHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 344444 344689999999999999999999999987521 1 32 46788889999999987 57899988
Q ss_pred cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHH
Q 017176 142 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE 221 (376)
Q Consensus 142 R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~d 221 (376)
.-+|+ .++.+++ .+.+++.|+++|.- .+++.+++.++++++. .++||++.+.+.++++
T Consensus 238 N~~~~----~~~Ai~~-~~~Le~~~i~~iEe----------------P~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~ 295 (412)
T 3stp_A 238 YMGWN----LDYAKRM-LPKLAPYEPRWLEE----------------PVIADDVAGYAELNAM-NIVPISGGEHEFSVIG 295 (412)
T ss_dssp TTCSC----HHHHHHH-HHHHGGGCCSEEEC----------------CSCTTCHHHHHHHHHT-CSSCEEECTTCCSHHH
T ss_pred CCCCC----HHHHHHH-HHHHHhcCCCEEEC----------------CCCcccHHHHHHHHhC-CCCCEEeCCCCCCHHH
Confidence 87775 3344444 45567889998851 1122347777788776 4899999999999999
Q ss_pred HHHHHH-cCcCeeEEchHH
Q 017176 222 VNAALR-KGAHHVMVGRAA 239 (376)
Q Consensus 222 a~~~l~-~Gad~VmiGRa~ 239 (376)
+.++++ ..+|.|++--+-
T Consensus 296 ~~~li~~~a~D~v~ik~~~ 314 (412)
T 3stp_A 296 CAELINRKAVSVLQYDTNR 314 (412)
T ss_dssp HHHHHHTTCCSEECCCHHH
T ss_pred HHHHHHcCCCCEEecChhh
Confidence 999998 569999874443
No 130
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=98.32 E-value=9.5e-06 Score=80.67 Aligned_cols=142 Identities=13% Similarity=0.059 Sum_probs=106.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccc-cccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCcc
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGV-SLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDS 150 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~-~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~ 150 (376)
.+++++++.|+.+.+.||+.|.++.|+|.... +|. ...++++...+++++||+.+ ++++.+...-+|+
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~-----~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~~~t---- 215 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLR-----GGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFT---- 215 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTT-----CCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBC----
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccc-----cCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCCCCC----
Confidence 68999999999998999999999999997531 132 12335778889999999987 5788887776665
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cC
Q 017176 151 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KG 229 (376)
Q Consensus 151 ~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~G 229 (376)
.++.+++ ++.+++.|+++|.- .+++.+++.++++++.. ++||++.+.+.+++++.++++ ..
T Consensus 216 ~~~A~~~-~~~Le~~~i~~iEe----------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~g~ 277 (433)
T 3rcy_A 216 TAGAIRL-GQAIEPYSPLWYEE----------------PVPPDNVGAMAQVARAV-RIPVATGERLTTKAEFAPVLREGA 277 (433)
T ss_dssp HHHHHHH-HHHHGGGCCSEEEC----------------CSCTTCHHHHHHHHHHS-SSCEEECTTCCSHHHHHHHHHTTC
T ss_pred HHHHHHH-HHHhhhcCCCEEEC----------------CCChhhHHHHHHHHhcc-CCCEEecCCCCCHHHHHHHHHcCC
Confidence 3344443 45667889998851 11223477778887764 899999999999999999999 56
Q ss_pred cCeeEEchHHhhC
Q 017176 230 AHHVMVGRAAYQN 242 (376)
Q Consensus 230 ad~VmiGRa~l~~ 242 (376)
+|.|++--+-.+-
T Consensus 278 ~D~v~~d~~~~GG 290 (433)
T 3rcy_A 278 AAILQPALGRAGG 290 (433)
T ss_dssp CSEECCCHHHHTH
T ss_pred CCEEEeCchhcCC
Confidence 9999885554433
No 131
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.32 E-value=9.4e-06 Score=75.67 Aligned_cols=144 Identities=13% Similarity=0.094 Sum_probs=95.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQL 154 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~ 154 (376)
..+.-..-++.+.+.|+|.||+.+ + +|..+..+.+.+.+-+.+|++.++.+ .+|+-+-... .+.+++
T Consensus 124 ~~~~Kv~Ea~~Ai~~GAdEIDmVI-----N------ig~lk~g~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~-Lt~eei 190 (288)
T 3oa3_A 124 STDQKVSEAKRAMQNGASELDMVM-----N------YPWLSEKRYTDVFQDIRAVRLAAKDA-ILKVILETSQ-LTADEI 190 (288)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC-----C------HHHHHTTCHHHHHHHHHHHHHHTTTS-EEEEECCGGG-CCHHHH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEe-----e------hhhhcCCcHHHHHHHHHHHHHHhcCC-CceEEEECCC-CCHHHH
Confidence 344445556667788999999753 1 35555567788888889998887655 3676552211 223444
Q ss_pred HHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEEEecCCCCHHHHHHHHHcCcC--
Q 017176 155 CDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAH-- 231 (376)
Q Consensus 155 ~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~nGgI~s~~da~~~l~~Gad-- 231 (376)
.. ..++..++|+|+|-.+.+.. ..| + ..-+...++++++.. .+++|.++|||+|.+|+.++++.||+
T Consensus 191 ~~-A~~ia~eaGADfVKTSTGf~-~~G---A-----T~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~Ri 260 (288)
T 3oa3_A 191 IA-GCVLSSLAGADYVKTSTGFN-GPG---A-----SIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERL 260 (288)
T ss_dssp HH-HHHHHHHTTCSEEECCCSSS-SCC---C-----CHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HH-HHHHHHHcCCCEEEcCCCCC-CCC---C-----CHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCcee
Confidence 43 45677789999998764321 011 1 111245566666432 47999999999999999999999999
Q ss_pred eeEEchHHhh
Q 017176 232 HVMVGRAAYQ 241 (376)
Q Consensus 232 ~VmiGRa~l~ 241 (376)
|+..|+.++.
T Consensus 261 GtS~g~~I~~ 270 (288)
T 3oa3_A 261 GASAGVKIVN 270 (288)
T ss_dssp EESCHHHHHH
T ss_pred ehhhHHHHHH
Confidence 6666666553
No 132
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=98.32 E-value=8.9e-06 Score=79.98 Aligned_cols=123 Identities=11% Similarity=0.053 Sum_probs=96.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 152 (376)
++++|.+.|+++.+.||+.|.|+.|. .+++...+++++||+.+ ++++.+...-+|+ .+
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~~d~e~v~avR~avG~d~~l~vDan~~~~----~~ 234 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQ----------------PNCAEDIRRLTAVREALGDEFPLMVDANQQWD----RE 234 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCC----------------SCHHHHHHHHHHHHHHHCSSSCEEEECTTCSC----HH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCC----------------CCHHHHHHHHHHHHHHcCCCCeEEEECCCCCC----HH
Confidence 79999999999999999999998652 35788889999999886 5788888877775 34
Q ss_pred HHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcC
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAH 231 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad 231 (376)
+.++++ +.+++.|+++|.- .+++.+++..+++.+.. ++||++.+.+.++++++++++ ..+|
T Consensus 235 ~ai~~~-~~l~~~~i~~iEq----------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d 296 (398)
T 2pp0_A 235 TAIRMG-RKMEQFNLIWIEE----------------PLDAYDIEGHAQLAAAL-DTPIATGEMLTSFREHEQLILGNASD 296 (398)
T ss_dssp HHHHHH-HHHGGGTCSCEEC----------------CSCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHTTCCS
T ss_pred HHHHHH-HHHHHcCCceeeC----------------CCChhhHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHHcCCCC
Confidence 555554 4467889987651 11223477777887765 899999999999999999998 5689
Q ss_pred eeEE
Q 017176 232 HVMV 235 (376)
Q Consensus 232 ~Vmi 235 (376)
.|++
T Consensus 297 ~v~i 300 (398)
T 2pp0_A 297 FVQP 300 (398)
T ss_dssp EECC
T ss_pred EEEe
Confidence 9887
No 133
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.31 E-value=1e-06 Score=80.56 Aligned_cols=81 Identities=21% Similarity=0.255 Sum_probs=63.5
Q ss_pred HHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHH
Q 017176 160 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAA 239 (376)
Q Consensus 160 ~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~ 239 (376)
+.++++|+|+|+++..+....+. ... +.++++++.. ++||+++|+|.++++++.+++.|||+|.+|+.+
T Consensus 39 ~~~~~~Gad~i~v~~~d~~~~~~---------~~~-~~i~~i~~~~-~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~ 107 (244)
T 1vzw_A 39 LAWQRSGAEWLHLVDLDAAFGTG---------DNR-ALIAEVAQAM-DIKVELSGGIRDDDTLAAALATGCTRVNLGTAA 107 (244)
T ss_dssp HHHHHTTCSEEEEEEHHHHHTSC---------CCH-HHHHHHHHHC-SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHcCCCEEEEecCchhhcCC---------ChH-HHHHHHHHhc-CCcEEEECCcCCHHHHHHHHHcCCCEEEECchH
Confidence 45567999999998754322221 112 6677777765 899999999999999999999999999999999
Q ss_pred hhCCchhhHhhh
Q 017176 240 YQNPWYTLGHVD 251 (376)
Q Consensus 240 l~~P~lf~~~~~ 251 (376)
+.||+++.+.++
T Consensus 108 l~~p~~~~~~~~ 119 (244)
T 1vzw_A 108 LETPEWVAKVIA 119 (244)
T ss_dssp HHCHHHHHHHHH
T ss_pred hhCHHHHHHHHH
Confidence 999987654433
No 134
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=98.31 E-value=9.3e-06 Score=80.00 Aligned_cols=135 Identities=13% Similarity=0.044 Sum_probs=100.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecC------CCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCC
Q 017176 75 NLDNLAKATELANAYNYDEINLNC------GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVD 146 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~------gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~ 146 (376)
++++|.++|+++.+.||+.|.|+. |+.... ...|....++++...+++++||+.+ ++++.+...-+|+
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s----~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~ 227 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQ----NLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFTD 227 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCS----CCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccC----cccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCC
Confidence 899999999999999999999986 543110 1112222356788999999999977 5788888776664
Q ss_pred CCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHH
Q 017176 147 DHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL 226 (376)
Q Consensus 147 ~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l 226 (376)
.++.++++ +.+++.|+++|.- .+++.+++..+++++.. ++||++.+.+.+++++++++
T Consensus 228 ----~~~a~~~~-~~l~~~~i~~iE~----------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i 285 (407)
T 2o56_A 228 ----TTSAIQFG-RMIEELGIFYYEE----------------PVMPLNPAQMKQVADKV-NIPLAAGERIYWRWGYRPFL 285 (407)
T ss_dssp ----HHHHHHHH-HHHGGGCCSCEEC----------------SSCSSSHHHHHHHHHHC-CSCEEECTTCCHHHHHHHHH
T ss_pred ----HHHHHHHH-HHHHhcCCCEEeC----------------CCChhhHHHHHHHHHhC-CCCEEeCCCcCCHHHHHHHH
Confidence 44555553 4567899988751 11223477778887765 89999999999999999999
Q ss_pred H-cCcCeeEE
Q 017176 227 R-KGAHHVMV 235 (376)
Q Consensus 227 ~-~Gad~Vmi 235 (376)
+ ..+|.|++
T Consensus 286 ~~~~~d~v~i 295 (407)
T 2o56_A 286 ENGSLSVIQP 295 (407)
T ss_dssp HTTCCSEECC
T ss_pred HcCCCCEEec
Confidence 8 56899887
No 135
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.28 E-value=4.9e-06 Score=84.00 Aligned_cols=125 Identities=14% Similarity=0.150 Sum_probs=77.6
Q ss_pred HHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHH
Q 017176 81 KATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYK 160 (376)
Q Consensus 81 ~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~ 160 (376)
+.+..+.+.|.|.+-+.. ..|. .....+.++.+++..++|+.+|--. +.+. ++
T Consensus 231 ~~a~~l~~~gvd~lvvdt--------a~G~--------~~~~L~~I~~l~~~~~vpvi~k~v~------~~~~-----a~ 283 (486)
T 2cu0_A 231 KRAIELDKAGVDVIVVDT--------AHAH--------NLKAIKSMKEMRQKVDADFIVGNIA------NPKA-----VD 283 (486)
T ss_dssp HHHHHHHHTTCSEEEEEC--------SCCC--------CHHHHHHHHHHHHTCCSEEEEEEEC------CHHH-----HT
T ss_pred HHHHHHHHhcCCceEEEe--------cCCc--------EeehhhHHHHHHHHhCCccccCCcC------CHHH-----HH
Confidence 445666677877765431 0111 1234556677777778899877222 1222 12
Q ss_pred HhhcCCccEEEEccCccc-------cCCCCCCCCCCCCcc-cHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCe
Q 017176 161 VSSLSPTRHFIIHSRKAL-------LNGISPAENRTIPPL-KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHH 232 (376)
Q Consensus 161 ~~e~~Gvd~I~vh~r~~~-------~~g~~~~~~~~~~~~-~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~ 232 (376)
.+. |+|.|.| |.... ..|. ..+.. ....+.++.++. ++|||+.|||.+..|+.+++..|||+
T Consensus 284 ~l~--G~d~v~v-g~g~g~~~~~r~~~~~------g~~~~~~l~~~~~~~~~~-~vpVia~GGi~~~~di~kalalGA~~ 353 (486)
T 2cu0_A 284 DLT--FADAVKV-GIGPGSICTTRIVAGV------GVPQITAVAMVADRAQEY-GLYVIADGGIRYSGDIVKAIAAGADA 353 (486)
T ss_dssp TCT--TSSEEEE-CSSCSTTBCHHHHTCC------CCCHHHHHHHHHHHHHHH-TCEEEEESCCCSHHHHHHHHHTTCSE
T ss_pred Hhh--CCCeEEE-eeeeccceeeeEEeec------CcchHHHHHHHHHHHHHc-CCcEEecCCCCCHHHHHHHHHcCCCc
Confidence 222 9999999 22110 0111 01111 133445555554 79999999999999999999999999
Q ss_pred eEEchHHhhC
Q 017176 233 VMVGRAAYQN 242 (376)
Q Consensus 233 VmiGRa~l~~ 242 (376)
||+|+.++..
T Consensus 354 v~~g~~~~~~ 363 (486)
T 2cu0_A 354 VMLGNLLAGT 363 (486)
T ss_dssp EEESTTTTTB
T ss_pred eeeChhhhcC
Confidence 9999999864
No 136
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=98.27 E-value=3.2e-05 Score=70.00 Aligned_cols=54 Identities=20% Similarity=0.207 Sum_probs=47.4
Q ss_pred cHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchhhH
Q 017176 194 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLG 248 (376)
Q Consensus 194 ~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~ 248 (376)
+.+.++++++...++||+.-|||+|++++++++ .|||+|.+|+++..||.++.+
T Consensus 167 ~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~~p~~~~~ 220 (228)
T 3vzx_A 167 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYEDFDRALK 220 (228)
T ss_dssp CHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHHCHHHHHH
T ss_pred CHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhcCHHHHHH
Confidence 478888888764379999999999999999998 599999999999999998643
No 137
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.26 E-value=3e-06 Score=85.91 Aligned_cols=134 Identities=13% Similarity=0.056 Sum_probs=80.8
Q ss_pred HHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-C-ccEEEEecCCCCCCccHHHHHHH
Q 017176 80 AKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-N-VPVSVKCRIGVDDHDSYNQLCDF 157 (376)
Q Consensus 80 ~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~-~pv~vKiR~g~~~~~~~~~~~~~ 157 (376)
.+.++.+.+.|.+.+.++... | ++..+.+.++.+++.. + .|+.++.-. +.++.
T Consensus 244 ~e~~~~l~e~gv~~l~Vd~~~-----------g-----~~~~~~~~i~~lk~~~~~~~~Vi~G~V~------t~~~a--- 298 (503)
T 1me8_A 244 RERVPALVEAGADVLCIDSSD-----------G-----FSEWQKITIGWIREKYGDKVKVGAGNIV------DGEGF--- 298 (503)
T ss_dssp HHHHHHHHHHTCSEEEECCSC-----------C-----CSHHHHHHHHHHHHHHGGGSCEEEEEEC------SHHHH---
T ss_pred HHHHHHHHhhhccceEEeccc-----------C-----cccchhhHHHHHHHhCCCCceEeecccc------CHHHH---
Confidence 344566666688888775421 1 1233556667777765 4 788775433 22222
Q ss_pred HHHHhhcCCccEEEEccCccccCCCCC-CCCCCCCcccHHHHHHHHhhCC--------CCeEEEecCCCCHHHHHHHHHc
Q 017176 158 IYKVSSLSPTRHFIIHSRKALLNGISP-AENRTIPPLKYEYYYALLRDFP--------DLTFTLNGGINTVDEVNAALRK 228 (376)
Q Consensus 158 i~~~~e~~Gvd~I~vh~r~~~~~g~~~-~~~~~~~~~~~~~v~~~~~~~~--------~ipVi~nGgI~s~~da~~~l~~ 228 (376)
+.+.++|+|+|.| |.......... .....++ ....+.++.+... ++|||+.|||.++.|+.++++.
T Consensus 299 --~~l~~aGad~I~V-g~~~g~~~~~r~~~~~g~p--~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlal 373 (503)
T 1me8_A 299 --RYLADAGADFIKI-GIGGGSICITREQKGIGRG--QATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAM 373 (503)
T ss_dssp --HHHHHHTCSEEEE-CSSCSTTCCSTTTTCCCCC--HHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHT
T ss_pred --HHHHHhCCCeEEe-cccCCcCcccccccCCCCc--hHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHc
Confidence 1234689999998 33210000000 0000112 2444444443221 5999999999999999999999
Q ss_pred CcCeeEEchHHhhCC
Q 017176 229 GAHHVMVGRAAYQNP 243 (376)
Q Consensus 229 Gad~VmiGRa~l~~P 243 (376)
|||+||+||.++...
T Consensus 374 GA~~V~iG~~~~~~~ 388 (503)
T 1me8_A 374 GADFIMLGRYFARFE 388 (503)
T ss_dssp TCSEEEESHHHHTBT
T ss_pred CCCEEEECchhhccc
Confidence 999999999998653
No 138
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.24 E-value=3.1e-05 Score=70.99 Aligned_cols=146 Identities=12% Similarity=0.248 Sum_probs=92.5
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcc-cCccEEEEecC
Q 017176 65 HPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN-TNVPVSVKCRI 143 (376)
Q Consensus 65 ~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~-~~~pv~vKiR~ 143 (376)
.++-+|+.|.-. . .+.++.+-++|+|-|-|| +...++|+++.++.+..-.. +-+-+.+|..-
T Consensus 74 ~~~pl~vGGGIr-s-~e~~~~~l~~GadkVii~---------------t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~ 136 (243)
T 4gj1_A 74 VSVNLQVGGGIR-S-KEEVKALLDCGVKRVVIG---------------SMAIKDATLCLEILKEFGSEAIVLALDTILKE 136 (243)
T ss_dssp CCSEEEEESSCC-C-HHHHHHHHHTTCSEEEEC---------------TTTTTCHHHHHHHHHHHCTTTEEEEEEEEESS
T ss_pred cCCCeEeccccc-c-HHHHHHHHHcCCCEEEEc---------------cccccCCchHHHHHhcccCceEEEEEEEEeCC
Confidence 345688877421 1 134455667899988775 33457899999998887432 22223333222
Q ss_pred -------CCCCCc--cHHHHHHHHHHHhhcCCccEEEEcc--CccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE
Q 017176 144 -------GVDDHD--SYNQLCDFIYKVSSLSPTRHFIIHS--RKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL 212 (376)
Q Consensus 144 -------g~~~~~--~~~~~~~~i~~~~e~~Gvd~I~vh~--r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~ 212 (376)
||.+.. +..+.+ +.+++.|+..|.++. |.....|. +.+.+..+.+.++++|||+
T Consensus 137 ~~~v~~~gw~~~~~~~~~~~~----~~~~~~g~~eil~t~Id~DGt~~G~-----------d~~l~~~l~~~~~~ipvia 201 (243)
T 4gj1_A 137 DYVVAVNAWQEASDKKLMEVL----DFYSNKGLKHILCTDISKDGTMQGV-----------NVRLYKLIHEIFPNICIQA 201 (243)
T ss_dssp SEEEC--------CCBHHHHH----HHHHTTTCCEEEEEETTC-----CC-----------CHHHHHHHHHHCTTSEEEE
T ss_pred CCEEEecCceecccchHHHHH----HHHhhcCCcEEEeeeecccccccCC-----------CHHHHHHHHHhcCCCCEEE
Confidence 454432 233433 234679999999984 33344442 3778888887777899999
Q ss_pred ecCCCCHHHHHHHHHcCcCeeEEchHHhhCC
Q 017176 213 NGGINTVDEVNAALRKGAHHVMVGRAAYQNP 243 (376)
Q Consensus 213 nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P 243 (376)
+||+.+.+|+.++ +.++++|.+|++++..-
T Consensus 202 sGGv~~~~Dl~~l-~~~~~gvivg~Al~~g~ 231 (243)
T 4gj1_A 202 SGGVASLKDLENL-KGICSGVIVGKALLDGV 231 (243)
T ss_dssp ESCCCSHHHHHHT-TTTCSEEEECHHHHTTS
T ss_pred EcCCCCHHHHHHH-HccCchhehHHHHHCCC
Confidence 9999999999875 56799999999986553
No 139
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.24 E-value=1.8e-06 Score=78.69 Aligned_cols=79 Identities=18% Similarity=0.212 Sum_probs=62.0
Q ss_pred HHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHH
Q 017176 160 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAA 239 (376)
Q Consensus 160 ~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~ 239 (376)
+.+++.|+|+|+++.......+ .+..++.+.++++.. ++||+++|+|.++++++++++.|||+|++|+.+
T Consensus 40 ~~~~~~G~d~i~v~~~~~~~~~---------~~~~~~~i~~i~~~~-~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~ 109 (253)
T 1h5y_A 40 VRYEEEGADEIAILDITAAPEG---------RATFIDSVKRVAEAV-SIPVLVGGGVRSLEDATTLFRAGADKVSVNTAA 109 (253)
T ss_dssp HHHHHTTCSCEEEEECCCCTTT---------HHHHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHH
T ss_pred HHHHHcCCCEEEEEeCCccccC---------CcccHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 4456899999999864421100 112356777877765 899999999999999999999999999999999
Q ss_pred hhCCchhhH
Q 017176 240 YQNPWYTLG 248 (376)
Q Consensus 240 l~~P~lf~~ 248 (376)
+.+|+++.+
T Consensus 110 ~~~~~~~~~ 118 (253)
T 1h5y_A 110 VRNPQLVAL 118 (253)
T ss_dssp HHCTHHHHH
T ss_pred hhCcHHHHH
Confidence 999997644
No 140
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=98.23 E-value=7.7e-06 Score=79.79 Aligned_cols=126 Identities=11% Similarity=0.047 Sum_probs=98.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 152 (376)
+++++++.|+.+.+.||+.|.|+.||+ | .+++...+++++||+.+ ++++.+...-+|++ .+
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~----------g----~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~d---~~ 208 (374)
T 3sjn_A 146 KPEDNVAIVQGLKDQGFSSIKFGGGVM----------G----DDPDTDYAIVKAVREAAGPEMEVQIDLASKWHT---CG 208 (374)
T ss_dssp SGGGGHHHHHHHHTTTCSEEEEECTTT----------T----SCHHHHHHHHHHHHHHHCSSSEEEEECTTTTCS---HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCC----------C----CCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCC---HH
Confidence 348999999999999999999998875 2 24788889999999986 67899998888873 33
Q ss_pred HHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcC
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAH 231 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad 231 (376)
+.+++ .+.+++.|+++|. . .+++.+++..+++++.. ++||++.+.+.+++++.++++ ..+|
T Consensus 209 ~A~~~-~~~l~~~~i~~iE----q------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~~~d 270 (374)
T 3sjn_A 209 HSAMM-AKRLEEFNLNWIE----E------------PVLADSLISYEKLSRQV-SQKIAGGESLTTRYEFQEFITKSNAD 270 (374)
T ss_dssp HHHHH-HHHSGGGCCSEEE----C------------SSCTTCHHHHHHHHHHC-SSEEEECTTCCHHHHHHHHHHHHCCS
T ss_pred HHHHH-HHHhhhcCceEEE----C------------CCCcccHHHHHHHHhhC-CCCEEeCCCcCCHHHHHHHHHcCCCC
Confidence 44443 4566788999885 1 11223477777887764 899999999999999999998 6799
Q ss_pred eeEE
Q 017176 232 HVMV 235 (376)
Q Consensus 232 ~Vmi 235 (376)
.|++
T Consensus 271 ~v~~ 274 (374)
T 3sjn_A 271 IVQP 274 (374)
T ss_dssp EECC
T ss_pred EEEe
Confidence 9887
No 141
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=98.22 E-value=1.6e-05 Score=77.71 Aligned_cols=124 Identities=8% Similarity=0.040 Sum_probs=96.1
Q ss_pred CCH---HHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCC
Q 017176 74 SNL---DNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDH 148 (376)
Q Consensus 74 ~~~---~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~ 148 (376)
.++ +.+++.|+++.+.||+.|.|+.|+ .+++...+++++||+.+ ++++.+...-+|+
T Consensus 135 ~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~~d~e~v~avR~a~G~d~~l~vDan~~~~-- 196 (382)
T 2gdq_A 135 DSPQWISRSVSNVEAQLKKGFEQIKVKIGG----------------TSFKEDVRHINALQHTAGSSITMILDANQSYD-- 196 (382)
T ss_dssp SSTTHHHHHHHHHHHHHTTTCCEEEEECSS----------------SCHHHHHHHHHHHHHHHCTTSEEEEECTTCCC--
T ss_pred CCcccHHHHHHHHHHHHHcCCCEEEEcCCC----------------CCHHHHHHHHHHHHHhhCCCCEEEEECCCCCC--
Confidence 578 999999999999999999998765 14678889999999887 5788888877775
Q ss_pred ccHHHHHHHHHHHhhcC-CccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH
Q 017176 149 DSYNQLCDFIYKVSSLS-PTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR 227 (376)
Q Consensus 149 ~~~~~~~~~i~~~~e~~-Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~ 227 (376)
.++.++++ +.+++. |+++|. . .+++.+++..+++++.. ++||++.+.+.++++++++++
T Consensus 197 --~~~a~~~~-~~l~~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~ 256 (382)
T 2gdq_A 197 --AAAAFKWE-RYFSEWTNIGWLE----E------------PLPFDQPQDYAMLRSRL-SVPVAGGENMKGPAQYVPLLS 256 (382)
T ss_dssp --HHHHHTTH-HHHTTCSCEEEEE----C------------CSCSSCHHHHHHHHTTC-SSCEEECTTCCSHHHHHHHHH
T ss_pred --HHHHHHHH-HHHhhccCCeEEE----C------------CCCcccHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHH
Confidence 34555543 456778 888765 1 01223477777777664 899999999999999999998
Q ss_pred -cCcCeeEE
Q 017176 228 -KGAHHVMV 235 (376)
Q Consensus 228 -~Gad~Vmi 235 (376)
..+|.|++
T Consensus 257 ~~~~d~v~i 265 (382)
T 2gdq_A 257 QRCLDIIQP 265 (382)
T ss_dssp TTCCSEECC
T ss_pred cCCCCEEec
Confidence 56899887
No 142
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.22 E-value=1.2e-05 Score=74.93 Aligned_cols=171 Identities=15% Similarity=0.098 Sum_probs=96.6
Q ss_pred CCEEEEecCC--CHHHHHHHHHHHHHCCCCEEEecCC--CCCcc---ccC----CCCccccccCCHHHHHHHHHHHhcc-
Q 017176 65 HPIVLQIGGS--NLDNLAKATELANAYNYDEINLNCG--CPSPK---VAG----HGCFGVSLMLDPKFVGEAMSVIAAN- 132 (376)
Q Consensus 65 ~p~~vQL~g~--~~~~~~~aa~~~~~~G~d~IeiN~g--cP~~~---v~r----~g~yG~~l~~~~~~~~eiv~~v~~~- 132 (376)
..++.=|... +.+...+.++.+.++|+|.|||..= -|... +.+ .=..| -+.+.+.++++++|+.
T Consensus 20 ~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G----~~~~~~~~~v~~~r~~~ 95 (271)
T 3nav_A 20 GAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAK----TTPDICFELIAQIRARN 95 (271)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTT----CCHHHHHHHHHHHHHHC
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcC----CCHHHHHHHHHHHHhcC
Confidence 3455555443 5688999999999999999999752 22210 000 00002 3567888999999986
Q ss_pred cCccEEEEecCCCCCCccHHHHHH---------------------HHHHHhhcCCccEEEE-ccCcc-------------
Q 017176 133 TNVPVSVKCRIGVDDHDSYNQLCD---------------------FIYKVSSLSPTRHFII-HSRKA------------- 177 (376)
Q Consensus 133 ~~~pv~vKiR~g~~~~~~~~~~~~---------------------~i~~~~e~~Gvd~I~v-h~r~~------------- 177 (376)
+++|+.+-.-.+.-....+++.++ .+...+.+.|++.|.+ ...+.
T Consensus 96 ~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~g 175 (271)
T 3nav_A 96 PETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKG 175 (271)
T ss_dssp TTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCS
T ss_pred CCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCC
Confidence 788987742110000000111111 1122334455554422 11110
Q ss_pred -c----cCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhh
Q 017176 178 -L----LNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 241 (376)
Q Consensus 178 -~----~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~ 241 (376)
. ..|..+.. ...++...+.+.++++. .++||+..+||.+++++.+.+..|||+|.+|+++..
T Consensus 176 fiY~vs~~GvTG~~-~~~~~~~~~~v~~vr~~-~~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv~ 242 (271)
T 3nav_A 176 YTYLLSRAGVTGAE-TKANMPVHALLERLQQF-DAPPALLGFGISEPAQVKQAIEAGAAGAISGSAVVK 242 (271)
T ss_dssp CEEECCCC---------CCHHHHHHHHHHHHT-TCCCEEECSSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred eEEEEeccCCCCcc-cCCchhHHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 0 01222221 11222124566666654 489999999999999999899999999999999863
No 143
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=98.21 E-value=1.8e-05 Score=77.60 Aligned_cols=123 Identities=11% Similarity=0.093 Sum_probs=95.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 152 (376)
+++.+.+.|+.+.+.||+.|.|+.|++ +++...+++++||+.+ ++++.+...-+|+ .+
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~----------------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~----~~ 224 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGA----------------PIEEDRMRIEAVLEEIGKDAQLAVDANGRFN----LE 224 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSS----------------CHHHHHHHHHHHHHHHTTTCEEEEECTTCCC----HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCC----------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCC----HH
Confidence 799999999999999999999997751 3577788999999876 5788888777775 34
Q ss_pred HHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHc----
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK---- 228 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~---- 228 (376)
+.+++ .+.+++.|+++|. . .+++.+++..+++++.. ++||++.+.+.++++++++++.
T Consensus 225 ~a~~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~~ 286 (392)
T 1tzz_A 225 TGIAY-AKMLRDYPLFWYE----E------------VGDPLDYALQAALAEFY-PGPMATGENLFSHQDARNLLRYGGMR 286 (392)
T ss_dssp HHHHH-HHHHTTSCCSEEE----C------------CSCTTCHHHHHHHTTTC-CSCEEECTTCCSHHHHHHHHHHSCCC
T ss_pred HHHHH-HHHHHHcCCCeec----C------------CCChhhHHHHHHHHhhC-CCCEEECCCCCCHHHHHHHHHcCCCc
Confidence 55555 3456789999875 1 01223477777777654 8999999999999999999984
Q ss_pred -CcCeeEE
Q 017176 229 -GAHHVMV 235 (376)
Q Consensus 229 -Gad~Vmi 235 (376)
.+|.|++
T Consensus 287 ~~~d~v~i 294 (392)
T 1tzz_A 287 PDRDWLQF 294 (392)
T ss_dssp TTTCEECC
T ss_pred cCCcEEEE
Confidence 5999887
No 144
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.20 E-value=1.7e-05 Score=70.67 Aligned_cols=143 Identities=12% Similarity=0.035 Sum_probs=91.2
Q ss_pred CCCEEEEecCCC-HHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEec
Q 017176 64 QHPIVLQIGGSN-LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 142 (376)
Q Consensus 64 ~~p~~vQL~g~~-~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR 142 (376)
+.|+.+.+.-.+ ++.+ ++.+.++|+|+|-++...+ .+.+.++++.+++. +.++.+-+.
T Consensus 53 ~~~i~~~~~~~~~~~~~---~~~~~~~Gad~v~v~~~~~-----------------~~~~~~~~~~~~~~-g~~~~v~~~ 111 (211)
T 3f4w_A 53 HKEVLADAKIMDGGHFE---SQLLFDAGADYVTVLGVTD-----------------VLTIQSCIRAAKEA-GKQVVVDMI 111 (211)
T ss_dssp TSEEEEEEEECSCHHHH---HHHHHHTTCSEEEEETTSC-----------------HHHHHHHHHHHHHH-TCEEEEECT
T ss_pred CCEEEEEEEeccchHHH---HHHHHhcCCCEEEEeCCCC-----------------hhHHHHHHHHHHHc-CCeEEEEec
Confidence 567877765444 3332 5667789999999964211 13345566665543 555554321
Q ss_pred CCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHH
Q 017176 143 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 222 (376)
Q Consensus 143 ~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da 222 (376)
. . .+..+.+ .. +.+.|+|+|.++.+...+.. .+..++.+.++++..+++||++.|||+ ++++
T Consensus 112 ~-~---~t~~~~~---~~-~~~~g~d~i~v~~g~~g~~~---------~~~~~~~i~~l~~~~~~~~i~~~gGI~-~~~~ 173 (211)
T 3f4w_A 112 C-V---DDLPARV---RL-LEEAGADMLAVHTGTDQQAA---------GRKPIDDLITMLKVRRKARIAVAGGIS-SQTV 173 (211)
T ss_dssp T-C---SSHHHHH---HH-HHHHTCCEEEEECCHHHHHT---------TCCSHHHHHHHHHHCSSCEEEEESSCC-TTTH
T ss_pred C-C---CCHHHHH---HH-HHHcCCCEEEEcCCCccccc---------CCCCHHHHHHHHHHcCCCcEEEECCCC-HHHH
Confidence 1 1 2222222 22 33679999998754221110 011267777877766689999999995 9999
Q ss_pred HHHHHcCcCeeEEchHHhhCCch
Q 017176 223 NAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 223 ~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
.++++.|||+|.+||+++..+..
T Consensus 174 ~~~~~~Gad~vvvGsai~~~~d~ 196 (211)
T 3f4w_A 174 KDYALLGPDVVIVGSAITHAADP 196 (211)
T ss_dssp HHHHTTCCSEEEECHHHHTCSSH
T ss_pred HHHHHcCCCEEEECHHHcCCCCH
Confidence 99999999999999999877653
No 145
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=98.19 E-value=1.5e-05 Score=72.15 Aligned_cols=144 Identities=19% Similarity=0.159 Sum_probs=92.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCC---ccH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDH---DSY 151 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~---~~~ 151 (376)
..+.-+.-++.+.+.|+|.||+.+ + +|.-+..+.+.+.+-+.++++.++ ...+|+-+-.... .+-
T Consensus 78 ~~~~K~~E~~~Ai~~GAdEIDmVi-----n------ig~lk~g~~~~v~~ei~~v~~a~~-~~~lKvIiEt~~L~~~~t~ 145 (231)
T 3ndo_A 78 VPGIKATEAELAVAAGATEIDMVI-----D------VGAALAGDLDAVSADITAVRKAVR-AATLKVIVESAALLEFSGE 145 (231)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC-----C------HHHHHTTCHHHHHHHHHHHHHHTT-TSEEEEECCHHHHHHHTCH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEe-----e------hHhhhcccHHHHHHHHHHHHHHcc-CCceEEEEECcccCCCCCH
Confidence 344445556677788999999964 1 465556778888888899888874 2345655421110 122
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcC
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAH 231 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad 231 (376)
++. ....++..++|+|+|-.+.+.....| +. .-+...+++... .+++|-++|||+|.+++.++++.||+
T Consensus 146 eei-~~a~~ia~~aGADfVKTSTGf~~~~g---At-----~edv~lm~~~v~--~~v~VKaaGGIrt~~~a~~~i~aGa~ 214 (231)
T 3ndo_A 146 PLL-ADVCRVARDAGADFVKTSTGFHPSGG---AS-----VQAVEIMARTVG--ERLGVKASGGIRTAEQAAAMLDAGAT 214 (231)
T ss_dssp HHH-HHHHHHHHHTTCSEEECCCSCCTTCS---CC-----HHHHHHHHHHHT--TTSEEEEESSCCSHHHHHHHHHTTCS
T ss_pred HHH-HHHHHHHHHHCcCEEEcCCCCCCCCC---CC-----HHHHHHHHHHhC--CCceEEEeCCCCCHHHHHHHHHhcch
Confidence 333 33456777899999986644210111 10 111333444443 37999999999999999999999999
Q ss_pred --eeEEchHHhh
Q 017176 232 --HVMVGRAAYQ 241 (376)
Q Consensus 232 --~VmiGRa~l~ 241 (376)
|+..|+.++.
T Consensus 215 RiGtS~g~~I~~ 226 (231)
T 3ndo_A 215 RLGLSGSRAVLD 226 (231)
T ss_dssp EEEESSHHHHHH
T ss_pred hcccchHHHHHh
Confidence 7777766653
No 146
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.17 E-value=3.6e-06 Score=75.42 Aligned_cols=148 Identities=13% Similarity=0.093 Sum_probs=96.4
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccc--------cCCCCccccccCCHHHHHHHHH--------
Q 017176 64 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKV--------AGHGCFGVSLMLDPKFVGEAMS-------- 127 (376)
Q Consensus 64 ~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v--------~r~g~yG~~l~~~~~~~~eiv~-------- 127 (376)
..|++.-+.+.+++++.+.++.+.+.|++.|+++.-+|...- ...-.+|. ++ ..+.+...++
T Consensus 12 ~~~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~~~~~~gag~-vl-~~d~~~~A~~~GAd~v~~ 89 (207)
T 2yw3_A 12 ESRLLPLLTVRGGEDLLGLARVLEEEGVGALEITLRTEKGLEALKALRKSGLLLGAGT-VR-SPKEAEAALEAGAAFLVS 89 (207)
T ss_dssp HHCEEEEECCCSCCCHHHHHHHHHHTTCCEEEEECSSTHHHHHHHHHTTSSCEEEEES-CC-SHHHHHHHHHHTCSEEEE
T ss_pred hCCEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHhCCCCEEEeCe-Ee-eHHHHHHHHHcCCCEEEc
Confidence 357888888888888888999898999999999987774310 00112233 22 3333332222
Q ss_pred ---------HHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHH
Q 017176 128 ---------VIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYY 198 (376)
Q Consensus 128 ---------~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v 198 (376)
..++ .+.|+.. |. .+..+..+ +.+.|+|+|.+++... .. ..+++
T Consensus 90 ~~~d~~v~~~~~~-~g~~~i~----G~---~t~~e~~~-----A~~~Gad~v~~fpa~~-~g-------------G~~~l 142 (207)
T 2yw3_A 90 PGLLEEVAALAQA-RGVPYLP----GV---LTPTEVER-----ALALGLSALKFFPAEP-FQ-------------GVRVL 142 (207)
T ss_dssp SSCCHHHHHHHHH-HTCCEEE----EE---CSHHHHHH-----HHHTTCCEEEETTTTT-TT-------------HHHHH
T ss_pred CCCCHHHHHHHHH-hCCCEEe----cC---CCHHHHHH-----HHHCCCCEEEEecCcc-cc-------------CHHHH
Confidence 2221 2334333 21 12334322 2357999999975210 00 14667
Q ss_pred HHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhh
Q 017176 199 YALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 241 (376)
Q Consensus 199 ~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~ 241 (376)
++++..++++||++.|||+ .+++.+.++.|+++|.+|++++.
T Consensus 143 k~l~~~~~~ipvvaiGGI~-~~n~~~~l~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 143 RAYAEVFPEVRFLPTGGIK-EEHLPHYAALPNLLAVGGSWLLQ 184 (207)
T ss_dssp HHHHHHCTTCEEEEBSSCC-GGGHHHHHTCSSBSCEEESGGGS
T ss_pred HHHHhhCCCCcEEEeCCCC-HHHHHHHHhCCCcEEEEehhhhC
Confidence 7777777789999999996 79999999999999999999876
No 147
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=98.17 E-value=3.1e-05 Score=70.29 Aligned_cols=156 Identities=17% Similarity=0.215 Sum_probs=101.0
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHCCCC--EEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcc--cCccEEEEe
Q 017176 66 PIVLQIGGSNLDNLAKATELANAYNYD--EINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN--TNVPVSVKC 141 (376)
Q Consensus 66 p~~vQL~g~~~~~~~~aa~~~~~~G~d--~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~--~~~pv~vKi 141 (376)
.+...|...|...+.+..+.++++|.| .+|+--|.-+++.. || -++++++|+. .++|+.+++
T Consensus 6 ~i~psil~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~----~G----------~~~v~~ir~~~~~~~~~dvhL 71 (228)
T 3ovp_A 6 KIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNIT----FG----------HPVVESLRKQLGQDPFFDMHM 71 (228)
T ss_dssp EEEEBCTTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBC----BC----------HHHHHHHHHHHCSSSCEEEEE
T ss_pred EeeeeheeCCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccc----cC----------HHHHHHHHHhhCCCCcEEEEE
Confidence 467788888888899999999999988 45555454343321 46 2466777766 477888877
Q ss_pred cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccc-----------cC---C------CC------------------
Q 017176 142 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKAL-----------LN---G------IS------------------ 183 (376)
Q Consensus 142 R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~-----------~~---g------~~------------------ 183 (376)
-. .+...+ ++ . +.++|+|.|++|.-... ++ | +.
T Consensus 72 mv--~~p~~~---i~---~-~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~~D~Vl~ms 142 (228)
T 3ovp_A 72 MV--SKPEQW---VK---P-MAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMT 142 (228)
T ss_dssp EC--SCGGGG---HH---H-HHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGGCSEEEEES
T ss_pred Ee--CCHHHH---HH---H-HHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhccCCeEEEee
Confidence 65 332222 11 1 22578899888853100 00 0 00
Q ss_pred ---CCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCch
Q 017176 184 ---PAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 184 ---~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
+..+...-+..++.++++++...+++|.+.||| +++.+.++.+.|||.+.+||++...++.
T Consensus 143 v~pGf~Gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI-~~~t~~~~~~aGAd~~VvGsaIf~a~dp 206 (228)
T 3ovp_A 143 VEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGV-GPDTVHKCAEAGANMIVSGSAIMRSEDP 206 (228)
T ss_dssp SCTTTCSCCCCGGGHHHHHHHHHHCTTCEEEEESSC-STTTHHHHHHHTCCEEEESHHHHTCSCH
T ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCCCEEEeCCc-CHHHHHHHHHcCCCEEEEeHHHhCCCCH
Confidence 000001112224556777766667999999999 5899999999999999999998876653
No 148
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=98.16 E-value=1.4e-05 Score=79.40 Aligned_cols=123 Identities=11% Similarity=0.044 Sum_probs=94.6
Q ss_pred CCH-HHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCcc
Q 017176 74 SNL-DNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDS 150 (376)
Q Consensus 74 ~~~-~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~ 150 (376)
.++ +.+.+.|+++.+.||+.|.|+.|+ +++...+++++||+.+ ++++.+...-+|+
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~-----------------~~~~d~e~v~avR~avG~d~~l~vDan~~~~---- 241 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGD-----------------AARVDIERVRHVRKVLGDEVDILTDANTAYT---- 241 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCS-----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCC----
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCC-----------------CHHHHHHHHHHHHHhcCCCCEEEEECCCCCC----
Confidence 578 999999999999999999998664 4677889999999876 5788887776664
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCC-CeEEEecCCCCHHHHHHHHH-c
Q 017176 151 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPD-LTFTLNGGINTVDEVNAALR-K 228 (376)
Q Consensus 151 ~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~-ipVi~nGgI~s~~da~~~l~-~ 228 (376)
.++.++++ +.+++.|+++|. . .+++.+++..+++++.. + +||++.+.+.++++++++++ .
T Consensus 242 ~~eai~~~-~~L~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~~iPIa~dE~~~~~~~~~~~i~~~ 303 (428)
T 3bjs_A 242 MADARRVL-PVLAEIQAGWLE----E------------PFACNDFASYREVAKIT-PLVPIAAGENHYTRFEFGQMLDAG 303 (428)
T ss_dssp HHHHHHHH-HHHHHTTCSCEE----C------------CSCTTCHHHHHHHTTTC-SSSCEEECTTCCSHHHHHHHHTTC
T ss_pred HHHHHHHH-HHHHhcCCCEEE----C------------CCCccCHHHHHHHHHhC-CCCcEEcCCCcCCHHHHHHHHHhC
Confidence 44555554 456789999875 1 01223477777776654 7 99999999999999999998 5
Q ss_pred CcCeeEE
Q 017176 229 GAHHVMV 235 (376)
Q Consensus 229 Gad~Vmi 235 (376)
.+|.|++
T Consensus 304 ~~d~v~i 310 (428)
T 3bjs_A 304 AVQVWQP 310 (428)
T ss_dssp CEEEECC
T ss_pred CCCEEEe
Confidence 5898877
No 149
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=98.16 E-value=3e-05 Score=76.45 Aligned_cols=144 Identities=12% Similarity=0.060 Sum_probs=105.8
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEe
Q 017176 64 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKC 141 (376)
Q Consensus 64 ~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKi 141 (376)
..|+-..+.+.+++++++.++.+.+.||+.|-+ .|+|..... ....+++...+++++||+.+ ++++.+..
T Consensus 114 ~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~~-------~~~~~~~~d~e~v~avR~avG~d~~L~vDa 185 (405)
T 3rr1_A 114 KMRTYSWVGGDRPADVIAGMKALQAGGFDHFKL-NGCEEMGII-------DTSRAVDAAVARVAEIRSAFGNTVEFGLDF 185 (405)
T ss_dssp CEEEEEECCCSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSCB-------CSHHHHHHHHHHHHHHHHTTGGGSEEEEEC
T ss_pred ceeeeEeCCCCCHHHHHHHHHHHHHcCCCEEEE-ecCCccccc-------ccchhHHHHHHHHHHHHHHhCCCceEEEEC
Confidence 345666677788999999999998899999999 887643211 11234667788999999987 57888887
Q ss_pred cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHH
Q 017176 142 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE 221 (376)
Q Consensus 142 R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~d 221 (376)
.-+|+ .++.+++ .+.+++.|+++|.- .+++.+++..+++++. .++||++.+.+.++++
T Consensus 186 N~~~~----~~~A~~~-~~~L~~~~i~~iEe----------------P~~~~d~~~~~~l~~~-~~iPIa~dE~i~~~~~ 243 (405)
T 3rr1_A 186 HGRVS----APMAKVL-IKELEPYRPLFIEE----------------PVLAEQAETYARLAAH-THLPIAAGERMFSRFD 243 (405)
T ss_dssp CSCBC----HHHHHHH-HHHHGGGCCSCEEC----------------SSCCSSTHHHHHHHTT-CSSCEEECTTCCSHHH
T ss_pred CCCCC----HHHHHHH-HHHHHhcCCCEEEC----------------CCCcccHHHHHHHHhc-CCCCEEecCCcCCHHH
Confidence 77775 3344443 45567889988751 1122236667777765 4899999999999999
Q ss_pred HHHHHH-cCcCeeEEch
Q 017176 222 VNAALR-KGAHHVMVGR 237 (376)
Q Consensus 222 a~~~l~-~Gad~VmiGR 237 (376)
+.++++ ..+|.|++--
T Consensus 244 ~~~~l~~~a~d~v~~d~ 260 (405)
T 3rr1_A 244 FKRVLEAGGVSILQPDL 260 (405)
T ss_dssp HHHHHHHCCCSEECCBT
T ss_pred HHHHHHHhCCCeEEECh
Confidence 999998 6699998743
No 150
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=98.15 E-value=3e-06 Score=78.39 Aligned_cols=162 Identities=13% Similarity=0.114 Sum_probs=93.6
Q ss_pred CCCEEEEecCCCHH-HHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEE
Q 017176 64 QHPIVLQIGGSNLD-NLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVK 140 (376)
Q Consensus 64 ~~p~~vQL~g~~~~-~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vK 140 (376)
+.|+..|+.+.+|- .+....+.++++||.+| +|+ |..- .-.|.|...|+.+.--..+.++.|+++. ++ +|+=
T Consensus 94 ~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~--ptvg-lidG~fr~~LEE~gm~~~~eve~I~~A~~~gL-~Ti~ 168 (286)
T 2p10_A 94 HTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNF--PTVG-LIDGLFRQNLEETGMSYAQEVEMIAEAHKLDL-LTTP 168 (286)
T ss_dssp SSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EEC--SCGG-GCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTC-EECC
T ss_pred CCCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EEC--CCcc-cccchhhhhHhhcCCCHHHHHHHHHHHHHCCC-eEEE
Confidence 68999999988873 34444478889999999 997 3211 1134555555554433444444444332 22 1221
Q ss_pred ecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCccc-HHHHH----HHHhhCCCCeEEEec-
Q 017176 141 CRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK-YEYYY----ALLRDFPDLTFTLNG- 214 (376)
Q Consensus 141 iR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~-~~~v~----~~~~~~~~ipVi~nG- 214 (376)
+- .+.++.. .+.++|+|.|.+|.+... +|.-+... ...... -+.+. .+++-.+++.|+.-|
T Consensus 169 ~v------~~~eeA~-----amA~agpDiI~~h~glT~-gglIG~~~-avs~~~~~e~i~~i~~a~~~vnpdvivLc~gG 235 (286)
T 2p10_A 169 YV------FSPEDAV-----AMAKAGADILVCHMGLTT-GGAIGARS-GKSMDDCVSLINECIEAARTIRDDIIILSHGG 235 (286)
T ss_dssp EE------CSHHHHH-----HHHHHTCSEEEEECSCC-----------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEEST
T ss_pred ec------CCHHHHH-----HHHHcCCCEEEECCCCCC-CCcccCCC-cccHHHhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence 11 1233322 123689999999976321 11111110 000001 12222 223334678777665
Q ss_pred CCCCHHHHHHHHHc--CcCeeEEchHHhhCC
Q 017176 215 GINTVDEVNAALRK--GAHHVMVGRAAYQNP 243 (376)
Q Consensus 215 gI~s~~da~~~l~~--Gad~VmiGRa~l~~P 243 (376)
+|.+++|++.+++. |+||+..+.++..=|
T Consensus 236 pIstpeDv~~~l~~t~G~~G~~gASsier~p 266 (286)
T 2p10_A 236 PIANPEDARFILDSCQGCHGFYGASSMERLP 266 (286)
T ss_dssp TCCSHHHHHHHHHHCTTCCEEEESHHHHHHH
T ss_pred CCCCHHHHHHHHhcCCCccEEEeehhhhcCC
Confidence 99999999999995 899999999998877
No 151
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.14 E-value=2.1e-05 Score=71.56 Aligned_cols=141 Identities=15% Similarity=0.103 Sum_probs=88.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQL 154 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~ 154 (376)
..+.-+.-++.+.+.|+|.||+.. + +|.-...+.+.+.+-+++|++.++- ..+|+-+-... -+-++.
T Consensus 93 ~~~~Kv~Ea~~Ai~~GAdEIDmVi-----N------ig~lk~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~-Lt~eei 159 (239)
T 3ngj_A 93 PSEVKAYETKVAVEQGAEEVDMVI-----N------IGMVKAKKYDDVEKDVKAVVDASGK-ALTKVIIECCY-LTNEEK 159 (239)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC-----C------HHHHHTTCHHHHHHHHHHHHHHHTT-SEEEEECCGGG-SCHHHH
T ss_pred chHHHHHHHHHHHHcCCCEEEEEe-----e------hHHhccccHHHHHHHHHHHHHHhcC-CceEEEEecCC-CCHHHH
Confidence 344445556667778999999964 1 3555556778888888888887742 24554331111 122333
Q ss_pred HHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcC--e
Q 017176 155 CDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAH--H 232 (376)
Q Consensus 155 ~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad--~ 232 (376)
..+.++..++|+|+|-.+.+.. ..| +. .-+.+.+++... .+++|.++|||+|.+|+.++++.||+ |
T Consensus 160 -~~a~~ia~~aGADfVKTSTGf~-~gg---At-----~~dv~lmr~~vg--~~v~VKasGGIrt~~da~~~i~aGA~riG 227 (239)
T 3ngj_A 160 -VEVCKRCVAAGAEYVKTSTGFG-THG---AT-----PEDVKLMKDTVG--DKALVKAAGGIRTFDDAMKMINNGASRIG 227 (239)
T ss_dssp -HHHHHHHHHHTCSEEECCCSSS-SCC---CC-----HHHHHHHHHHHG--GGSEEEEESSCCSHHHHHHHHHTTEEEEE
T ss_pred -HHHHHHHHHHCcCEEECCCCCC-CCC---CC-----HHHHHHHHHhhC--CCceEEEeCCCCCHHHHHHHHHhccccee
Confidence 3345666789999998774421 011 11 011333444443 37999999999999999999999999 5
Q ss_pred eEEchHHh
Q 017176 233 VMVGRAAY 240 (376)
Q Consensus 233 VmiGRa~l 240 (376)
+..|+.++
T Consensus 228 tS~~~~I~ 235 (239)
T 3ngj_A 228 ASAGIAIL 235 (239)
T ss_dssp ESCHHHHH
T ss_pred cccHHHHH
Confidence 55555544
No 152
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=98.13 E-value=2.6e-05 Score=71.68 Aligned_cols=142 Identities=16% Similarity=0.132 Sum_probs=91.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQL 154 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~ 154 (376)
..+.-+.-++.+.+.|+|.||+.+ + +|.-...+.+.+.+-+.++++.++ ...+|+-+-... -+-++.
T Consensus 109 ~~~~Kv~Ea~~Ai~~GAdEIDmVi-----N------ig~lk~g~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~-Lt~eei 175 (260)
T 3r12_A 109 ETRTKAHEAIFAVESGADEIDMVI-----N------VGMLKAKEWEYVYEDIRSVVESVK-GKVVKVIIETCY-LDTEEK 175 (260)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC-----C------HHHHHTTCHHHHHHHHHHHHHHTT-TSEEEEECCGGG-CCHHHH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEe-----e------hhhhccccHHHHHHHHHHHHHhcC-CCcEEEEEeCCC-CCHHHH
Confidence 344444455667777999999853 1 465556688888888888888764 234565442211 122333
Q ss_pred HHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcC--e
Q 017176 155 CDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAH--H 232 (376)
Q Consensus 155 ~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad--~ 232 (376)
. .+.++..++|+|+|-.+.+.. ..| +. .-+...+.+... .+++|-++|||+|.+|+.++++.||+ |
T Consensus 176 ~-~A~~ia~eaGADfVKTSTGf~-~~G---AT-----~edV~lm~~~vg--~~v~VKaAGGIrt~~~al~mi~aGA~RiG 243 (260)
T 3r12_A 176 I-AACVISKLAGAHFVKTSTGFG-TGG---AT-----AEDVHLMKWIVG--DEMGVKASGGIRTFEDAVKMIMYGADRIG 243 (260)
T ss_dssp H-HHHHHHHHTTCSEEECCCSSS-SCC---CC-----HHHHHHHHHHHC--TTSEEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred H-HHHHHHHHhCcCEEEcCCCCC-CCC---CC-----HHHHHHHHHHhC--CCceEEEeCCCCCHHHHHHHHHcCCceee
Confidence 3 345677789999998764321 011 10 111233344432 37999999999999999999999999 6
Q ss_pred eEEchHHhh
Q 017176 233 VMVGRAAYQ 241 (376)
Q Consensus 233 VmiGRa~l~ 241 (376)
+..|+.++.
T Consensus 244 tS~g~~I~~ 252 (260)
T 3r12_A 244 TSSGVKIVQ 252 (260)
T ss_dssp ESCHHHHHH
T ss_pred cchHHHHHH
Confidence 666666654
No 153
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=98.13 E-value=8.1e-05 Score=71.57 Aligned_cols=131 Identities=14% Similarity=0.109 Sum_probs=96.3
Q ss_pred EecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCC
Q 017176 70 QIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDH 148 (376)
Q Consensus 70 QL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~ 148 (376)
.+.+.+++++.+.|+++.+.||+.|.|+.|+ +++...+++++||+.- ++++.+...-+|+
T Consensus 134 ~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~-----------------~~~~d~~~v~avr~~g~~~~l~vDan~~~~-- 194 (345)
T 2zad_A 134 TVGIDTVENRVKEAKKIFEEGFRVIKIKVGE-----------------NLKEDIEAVEEIAKVTRGAKYIVDANMGYT-- 194 (345)
T ss_dssp EECSCCHHHHHHHHHHHHHTTCSEEEEECCS-----------------CHHHHHHHHHHHHHHSTTCEEEEECTTCSC--
T ss_pred EecCCCHHHHHHHHHHHHHcCcCEEEEeecC-----------------CHHHHHHHHHHHHhhCCCCeEEEECCCCCC--
Confidence 3555689999999999999999999998664 3566678889998862 3566665555553
Q ss_pred ccHHHHHHHHHHHhhcCCcc--EEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHH
Q 017176 149 DSYNQLCDFIYKVSSLSPTR--HFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL 226 (376)
Q Consensus 149 ~~~~~~~~~i~~~~e~~Gvd--~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l 226 (376)
.++.++++ +.+++.|++ +|. . .+++.+++..+++.+.. ++||++.+.+.+++++.+++
T Consensus 195 --~~~a~~~~-~~l~~~~i~~~~iE----~------------P~~~~~~~~~~~l~~~~-~ipia~dE~~~~~~~~~~~i 254 (345)
T 2zad_A 195 --QKEAVEFA-RAVYQKGIDIAVYE----Q------------PVRREDIEGLKFVRFHS-PFPVAADESARTKFDVMRLV 254 (345)
T ss_dssp --HHHHHHHH-HHHHHTTCCCSEEE----C------------CSCTTCHHHHHHHHHHS-SSCEEESTTCCSHHHHHHHH
T ss_pred --HHHHHHHH-HHHHhcCCCeeeee----C------------CCCcccHHHHHHHHHhC-CCCEEEeCCcCCHHHHHHHH
Confidence 44555554 456778998 764 1 11233477777877765 89999999999999999999
Q ss_pred H-cCcCeeEE--chHH
Q 017176 227 R-KGAHHVMV--GRAA 239 (376)
Q Consensus 227 ~-~Gad~Vmi--GRa~ 239 (376)
+ ..+|.|++ ++|-
T Consensus 255 ~~~~~d~v~ik~~~GG 270 (345)
T 2zad_A 255 KEEAVDYVNIKLMKSG 270 (345)
T ss_dssp HHTCCSEEEECHHHHH
T ss_pred HhCCCCEEEEeccccc
Confidence 8 56999998 5543
No 154
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=98.11 E-value=3.6e-05 Score=76.65 Aligned_cols=125 Identities=11% Similarity=0.071 Sum_probs=94.8
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCcc
Q 017176 73 GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDS 150 (376)
Q Consensus 73 g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~ 150 (376)
+.+++++.+.|+++.+.||+.|.|+.|+ +++...+++++||+.+ ++++.+...-+|+
T Consensus 196 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~-----------------~~~~d~e~v~avR~a~G~d~~l~vDan~~~~---- 254 (441)
T 2hxt_A 196 GYSDEKLVRLAKEAVADGFRTIKLKVGA-----------------NVQDDIRRCRLARAAIGPDIAMAVDANQRWD---- 254 (441)
T ss_dssp TSCHHHHHHHHHHHHHTTCSEEEEECCS-----------------CHHHHHHHHHHHHHHHCSSSEEEEECTTCCC----
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccCC-----------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCC----
Confidence 3589999999999999999999998652 3677788999999876 5778887766664
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cC
Q 017176 151 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KG 229 (376)
Q Consensus 151 ~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~G 229 (376)
.++.+++ .+.+++.|+++|.- .+++.+++..+++++...++||++.+.+.+++++.++++ ..
T Consensus 255 ~~~a~~~-~~~l~~~~i~~iEq----------------P~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 317 (441)
T 2hxt_A 255 VGPAIDW-MRQLAEFDIAWIEE----------------PTSPDDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGA 317 (441)
T ss_dssp HHHHHHH-HHTTGGGCCSCEEC----------------CSCTTCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTC
T ss_pred HHHHHHH-HHHHHhcCCCeeeC----------------CCCHHHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCC
Confidence 4455554 34567789987651 012224676777776543699999999999999999998 56
Q ss_pred cCeeEE
Q 017176 230 AHHVMV 235 (376)
Q Consensus 230 ad~Vmi 235 (376)
+|.|++
T Consensus 318 ~d~v~i 323 (441)
T 2hxt_A 318 VDLIQI 323 (441)
T ss_dssp CSEECC
T ss_pred CCEEEe
Confidence 899887
No 155
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=98.10 E-value=1.8e-05 Score=71.95 Aligned_cols=53 Identities=19% Similarity=0.314 Sum_probs=46.6
Q ss_pred cHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchhh
Q 017176 194 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTL 247 (376)
Q Consensus 194 ~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~ 247 (376)
..+.+.++++...++||+.-|||+|+++++++++ |||+|.+|+++..+|.-++
T Consensus 177 ~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGSa~v~~~~~~~ 229 (234)
T 2f6u_A 177 NPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTIIVGNVIYEKGIDAF 229 (234)
T ss_dssp CHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSSEEEECHHHHHHCHHHH
T ss_pred hHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCCEEEEChHHHhCHHHHH
Confidence 4778888877644899999999999999999999 9999999999999997544
No 156
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=98.10 E-value=3.4e-05 Score=70.50 Aligned_cols=153 Identities=17% Similarity=0.072 Sum_probs=94.3
Q ss_pred HHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEE------ecCCCCCC-----
Q 017176 80 AKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVK------CRIGVDDH----- 148 (376)
Q Consensus 80 ~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vK------iR~g~~~~----- 148 (376)
.++++.+.++|+|.|+|..+ . | -+.+.+.++++++|+ +++|+.+= +..|.+-.
T Consensus 23 ~~~~~~l~~~GaD~ielG~S--------~---G----vt~~~~~~~v~~ir~-~~~Pivlm~y~~n~i~~G~dg~iiPdL 86 (240)
T 1viz_A 23 DEQLEILCESGTDAVIIGGS--------D---G----VTEDNVLRMMSKVRR-FLVPCVLEVSAIEAIVPGFDLYFIPSV 86 (240)
T ss_dssp HHHHHHHHTSCCSEEEECC-------------------CHHHHHHHHHHHTT-SSSCEEEECSCGGGCCSCCSEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCC--------C---C----CCHHHHHHHHHHhhC-cCCCEEEecCccccccCCCCEEEEccc
Confidence 44567788899999999761 1 3 357789999999998 88898752 22232210
Q ss_pred --ccHHHHH-HHHHHHhhcCC-----ccEEE----E-ccCcc---cc----------------------CCCCCCCCCCC
Q 017176 149 --DSYNQLC-DFIYKVSSLSP-----TRHFI----I-HSRKA---LL----------------------NGISPAENRTI 190 (376)
Q Consensus 149 --~~~~~~~-~~i~~~~e~~G-----vd~I~----v-h~r~~---~~----------------------~g~~~~~~~~~ 190 (376)
++-+++. ..-...+.+.| .+.|- + ++.+. .. .+.......-
T Consensus 87 p~ee~~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~~~~VYl~s~G- 165 (240)
T 1viz_A 87 LNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEYSG- 165 (240)
T ss_dssp TTBSSGGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEECTT-
T ss_pred CcccChhhhcchhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHHhCcccCCCEEEEeCCC-
Confidence 1111110 00012345677 66664 3 22111 00 0110000000
Q ss_pred CcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCc-hhhHhhh
Q 017176 191 PPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW-YTLGHVD 251 (376)
Q Consensus 191 ~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~-lf~~~~~ 251 (376)
.+...+.+.++++...++||+.-|||+|+++++++++ |||+|.+|+++..+|. ++ ++++
T Consensus 166 ~~~~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v~~~~~~~-~~v~ 225 (240)
T 1viz_A 166 VLGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVYEDFDRAL-KTVA 225 (240)
T ss_dssp SCCCHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHHHCHHHHH-THHH
T ss_pred ccChHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHHhCHHHHH-HHHH
Confidence 1234778888877533899999999999999999999 9999999999999998 54 4443
No 157
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=98.08 E-value=6.3e-05 Score=73.78 Aligned_cols=139 Identities=9% Similarity=0.050 Sum_probs=104.2
Q ss_pred CCEEEEec---CCCHHHHHHHH-HHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEE
Q 017176 65 HPIVLQIG---GSNLDNLAKAT-ELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVS 138 (376)
Q Consensus 65 ~p~~vQL~---g~~~~~~~~aa-~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~ 138 (376)
-|+-..+. ..+++++++.+ +.+.+.||..+.+..|++.+. ...+++.-.+++++||+.+ ++++.
T Consensus 126 v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~----------~~~~~~~d~~~v~avR~a~g~~~~l~ 195 (393)
T 4dwd_A 126 LPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTR----------CDVDIPGDIAKARAVRELLGPDAVIG 195 (393)
T ss_dssp EEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTC----------CSCCHHHHHHHHHHHHHHHCTTCCEE
T ss_pred eeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcc----------cccCHHHHHHHHHHHHHHhCCCCeEE
Confidence 34555542 35789999888 887778999999999987532 2357888899999999986 67899
Q ss_pred EEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCC
Q 017176 139 VKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINT 218 (376)
Q Consensus 139 vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s 218 (376)
|...-+|+. ++.+++ .+.+++.|+++|.= .+++.+++..+++++.. ++||++...+.+
T Consensus 196 vDaN~~~~~----~~A~~~-~~~L~~~~i~~iEq----------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~ 253 (393)
T 4dwd_A 196 FDANNGYSV----GGAIRV-GRALEDLGYSWFEE----------------PVQHYHVGAMGEVAQRL-DITVSAGEQTYT 253 (393)
T ss_dssp EECTTCCCH----HHHHHH-HHHHHHTTCSEEEC----------------CSCTTCHHHHHHHHHHC-SSEEEBCTTCCS
T ss_pred EECCCCCCH----HHHHHH-HHHHHhhCCCEEEC----------------CCCcccHHHHHHHHhhC-CCCEEecCCcCC
Confidence 988887763 344443 34567899998861 11223477777877764 899999999999
Q ss_pred HHHHHHHHHcCcCeeEE
Q 017176 219 VDEVNAALRKGAHHVMV 235 (376)
Q Consensus 219 ~~da~~~l~~Gad~Vmi 235 (376)
.+++.++++.|+|.|++
T Consensus 254 ~~~~~~~i~~~~d~v~~ 270 (393)
T 4dwd_A 254 LQALKDLILSGVRMVQP 270 (393)
T ss_dssp HHHHHHHHHHTCCEECC
T ss_pred HHHHHHHHHcCCCEEEe
Confidence 99999999844999887
No 158
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=98.07 E-value=3.3e-05 Score=76.04 Aligned_cols=153 Identities=10% Similarity=0.052 Sum_probs=106.0
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCcccc------CCCCcccccc--CCHHHHHHHHHHHhccc--
Q 017176 64 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVA------GHGCFGVSLM--LDPKFVGEAMSVIAANT-- 133 (376)
Q Consensus 64 ~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~------r~g~yG~~l~--~~~~~~~eiv~~v~~~~-- 133 (376)
..|+-..+.+.+++.+++.++.+.+.||..+-+..|++..... .... |..+. ..++...+++++||+.+
T Consensus 122 ~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~d~~~v~avR~a~G~ 200 (401)
T 3sbf_A 122 AIPVYTHATSDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTE-GSYYDQDQYMDNTLTMFKSLREKYGN 200 (401)
T ss_dssp SEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCS-SEECCHHHHHHHHHHHHHHHHHHHTT
T ss_pred eeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccc-cccccchHHHHHHHHHHHHHHHHcCC
Confidence 3345455667889999999999888999999999987531100 0011 22221 12567888999999987
Q ss_pred CccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEe
Q 017176 134 NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN 213 (376)
Q Consensus 134 ~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~n 213 (376)
++++.+...-+|+. ++.+++ .+.+++.|+++|.- . +++.+++.++++++. .++||++.
T Consensus 201 d~~l~vDan~~~~~----~~A~~~-~~~L~~~~i~~iEq----P------------~~~~~~~~~~~l~~~-~~iPIa~d 258 (401)
T 3sbf_A 201 QFHILHDVHERLFP----NQAIQF-AKEVEQYKPYFIED----I------------LPPNQTEWLDNIRSQ-SSVSLGLG 258 (401)
T ss_dssp SSEEEEECTTCSCH----HHHHHH-HHHHGGGCCSCEEC----S------------SCTTCGGGHHHHHTT-CCCCEEEC
T ss_pred CCEEEEECCCCCCH----HHHHHH-HHHHHhcCCCEEEC----C------------CChhHHHHHHHHHhh-CCCCEEeC
Confidence 57899988888763 344444 44567889988751 0 112235556677665 48999999
Q ss_pred cCCCCHHHHHHHHH-cCcCeeEEchHH
Q 017176 214 GGINTVDEVNAALR-KGAHHVMVGRAA 239 (376)
Q Consensus 214 GgI~s~~da~~~l~-~Gad~VmiGRa~ 239 (376)
+.+.+++++.++++ ..+|.|++--+-
T Consensus 259 E~~~~~~~~~~~i~~~~~d~v~~k~~~ 285 (401)
T 3sbf_A 259 ELFNNPEEWKSLIANRRIDFIRCHVSQ 285 (401)
T ss_dssp TTCCSHHHHHHHHHTTCCSEECCCGGG
T ss_pred CccCCHHHHHHHHhcCCCCEEecCccc
Confidence 99999999999998 569998874433
No 159
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.07 E-value=5.7e-05 Score=70.00 Aligned_cols=153 Identities=15% Similarity=0.131 Sum_probs=90.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCC-----------CccccccCCHHHHHHHHHHHhccc-CccEEEEe
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHG-----------CFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKC 141 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g-----------~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKi 141 (376)
.+.+...+.++.+.++|+|.|||+. |...-...| ..| -+.+.+.++++++++.+ ++|+.+ +
T Consensus 28 p~~~~~~~~~~~l~~~G~D~IElG~--P~sdP~adgp~i~~a~~~al~~G----~~~~~~~~~v~~ir~~~~~~Pi~~-m 100 (262)
T 2ekc_A 28 PDYETSLKAFKEVLKNGTDILEIGF--PFSDPVADGPTIQVAHEVALKNG----IRFEDVLELSETLRKEFPDIPFLL-M 100 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEEC--CCSCCTTSCHHHHHHHHHHHHTT----CCHHHHHHHHHHHHHHCTTSCEEE-E
T ss_pred CChHHHHHHHHHHHHcCCCEEEECC--CCCCcccccHHHHHHHHHHHHcC----CCHHHHHHHHHHHHhhcCCCCEEE-E
Confidence 3557888899999999999999954 432100000 012 25567889999999888 889877 2
Q ss_pred cCCCCCC-c--cHHHHHHHHHHHhhcCCccEEEEccC--------------------------cc---------------
Q 017176 142 RIGVDDH-D--SYNQLCDFIYKVSSLSPTRHFIIHSR--------------------------KA--------------- 177 (376)
Q Consensus 142 R~g~~~~-~--~~~~~~~~i~~~~e~~Gvd~I~vh~r--------------------------~~--------------- 177 (376)
++.+. . .+++ ++. .+.++|+|.++++.- +.
T Consensus 101 --~y~n~v~~~g~~~---f~~-~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~gfi 174 (262)
T 2ekc_A 101 --TYYNPIFRIGLEK---FCR-LSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMT 174 (262)
T ss_dssp --CCHHHHHHHCHHH---HHH-HHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCSSCE
T ss_pred --ecCcHHHHhhHHH---HHH-HHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCCE
Confidence 11110 0 0111 111 223456665554321 00
Q ss_pred ---ccCCCCCCCCCCCC-cccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhC
Q 017176 178 ---LLNGISPAENRTIP-PLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 242 (376)
Q Consensus 178 ---~~~g~~~~~~~~~~-~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 242 (376)
...|..+.. ...+ +...+.+.++++.. ++||+..+||.+++++.+ +..|||+|.+|+++...
T Consensus 175 y~vs~~g~TG~~-~~~~~~~~~~~v~~vr~~~-~~pv~vG~GI~t~e~~~~-~~~gADgvIVGSai~~~ 240 (262)
T 2ekc_A 175 YFVSVTGTTGAR-EKLPYERIKKKVEEYRELC-DKPVVVGFGVSKKEHARE-IGSFADGVVVGSALVKL 240 (262)
T ss_dssp EEESSCC----------CHHHHHHHHHHHHHC-CSCEEEESSCCSHHHHHH-HHTTSSEEEECHHHHHH
T ss_pred EEEecCCccCCC-CCcCcccHHHHHHHHHhhc-CCCEEEeCCCCCHHHHHH-HHcCCCEEEECHHHHhh
Confidence 000111111 0001 11135667776654 899999999999999999 66789999999999765
No 160
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=98.05 E-value=3.6e-05 Score=75.79 Aligned_cols=135 Identities=14% Similarity=0.042 Sum_probs=99.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCcccc-ccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCcc
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVS-LMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDS 150 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~-l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~ 150 (376)
.+++.+++.|+.+.+.||..+.++.|+|... ..|.. ...+++...+++++||+.+ ++++.+...-+|+
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~-----~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~---- 220 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYTI-----YDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHGQFT---- 220 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCBT-----TCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCSCBC----
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCcc-----cccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCCCcC----
Confidence 4789999999888888999999999987531 11211 1224677888999999987 5788888777775
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cC
Q 017176 151 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KG 229 (376)
Q Consensus 151 ~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~G 229 (376)
.++.+++ .+.+++.|+++|.- .+++.+++..+++++.. ++||++.+.+.+++++.++++ ..
T Consensus 221 ~~~A~~~-~~~l~~~~i~~iEe----------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a 282 (404)
T 4e5t_A 221 VSGAKRL-ARRLEAYDPLWFEE----------------PIPPEKPEDMAEVARYT-SIPVATGERLCTKYEFSRVLETGA 282 (404)
T ss_dssp HHHHHHH-HHHHGGGCCSEEEC----------------CSCTTCHHHHHHHHHHC-SSCEEECTTCCHHHHHHHHHHHTC
T ss_pred HHHHHHH-HHHHhhcCCcEEEC----------------CCCcccHHHHHHHHhhC-CCCEEeCCCcCCHHHHHHHHHhCC
Confidence 3344443 45567889998861 11222467777887765 899999999999999999998 56
Q ss_pred cCeeEE
Q 017176 230 AHHVMV 235 (376)
Q Consensus 230 ad~Vmi 235 (376)
+|.|++
T Consensus 283 ~d~v~~ 288 (404)
T 4e5t_A 283 ASILQM 288 (404)
T ss_dssp CSEECC
T ss_pred CCEEec
Confidence 899876
No 161
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.04 E-value=2.4e-05 Score=72.19 Aligned_cols=50 Identities=18% Similarity=0.094 Sum_probs=42.0
Q ss_pred HHHHHHHHhhCC----CCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCch
Q 017176 195 YEYYYALLRDFP----DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 195 ~~~v~~~~~~~~----~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
++.+.++.+..+ ++|+|+.|||.|++|+.++.+ |+|+|.||++++..++.
T Consensus 192 l~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVGsAl~~~~d~ 245 (254)
T 1vc4_A 192 LETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIGTSLMRAPDL 245 (254)
T ss_dssp TTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEEECHHHHTSSCH
T ss_pred HHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEEEeHHHcCCCCH
Confidence 444445554443 689999999999999999999 99999999999998885
No 162
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=98.03 E-value=6.6e-05 Score=67.70 Aligned_cols=142 Identities=14% Similarity=0.090 Sum_probs=91.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQL 154 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~ 154 (376)
..+.-..-++.+.+.|+|.||+.+ + +|.-...+.+.+.+-+.++++.++-+ .+|+-+-... .+.++
T Consensus 69 ~~~~k~~e~~~Ai~~GAdevd~vi-----n------ig~~~~g~~~~v~~ei~~v~~a~~~~-~lkvIlet~~-l~~e~- 134 (220)
T 1ub3_A 69 EKEVKALEAALACARGADEVDMVL-----H------LGRAKAGDLDYLEAEVRAVREAVPQA-VLKVILETGY-FSPEE- 134 (220)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC-----C------HHHHHTTCHHHHHHHHHHHHHHSTTS-EEEEECCGGG-SCHHH-
T ss_pred chHHHHHHHHHHHHcCCCEEEecc-----c------chhhhCCCHHHHHHHHHHHHHHHcCC-CceEEEecCC-CCHHH-
Confidence 344455566777888999999964 1 35444567788888888888876433 5564332111 12233
Q ss_pred HHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcC--e
Q 017176 155 CDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAH--H 232 (376)
Q Consensus 155 ~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad--~ 232 (376)
+....++..++|+|+|-.+.+... .| +. +-+.+.+.+.. -.++||-++|||+|.+++.++++.||+ |
T Consensus 135 i~~a~~ia~eaGADfVKTsTGf~~-~g---at-----~~dv~~m~~~v--g~~v~VkaaGGirt~~~al~~i~aGa~RiG 203 (220)
T 1ub3_A 135 IARLAEAAIRGGADFLKTSTGFGP-RG---AS-----LEDVALLVRVA--QGRAQVKAAGGIRDRETALRMLKAGASRLG 203 (220)
T ss_dssp HHHHHHHHHHHTCSEEECCCSSSS-CC---CC-----HHHHHHHHHHH--TTSSEEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHhCCCEEEeCCCCCC-CC---CC-----HHHHHHHHHhh--CCCCeEEEECCCCCHHHHHHHHHCCCcccc
Confidence 334566777899999986643210 11 10 11133344443 237999999999999999999999999 7
Q ss_pred eEEchHHhh
Q 017176 233 VMVGRAAYQ 241 (376)
Q Consensus 233 VmiGRa~l~ 241 (376)
+..|+.++.
T Consensus 204 ~S~g~~I~~ 212 (220)
T 1ub3_A 204 TSSGVALVA 212 (220)
T ss_dssp ETTHHHHHC
T ss_pred hhHHHHHHH
Confidence 777777553
No 163
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=98.03 E-value=2.3e-05 Score=77.55 Aligned_cols=146 Identities=12% Similarity=0.083 Sum_probs=103.4
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccc--------------------cccCCHHHHHH
Q 017176 65 HPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGV--------------------SLMLDPKFVGE 124 (376)
Q Consensus 65 ~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~--------------------~l~~~~~~~~e 124 (376)
.|+-.-+.+.+++++++.++.+.+.||..+-+..|+|...+. ||. ...++++...+
T Consensus 133 v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~----~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~ 208 (418)
T 3r4e_A 133 IMVYGHANGSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDA----YGVGRGKLYYEPADASLPSVTGWDTRKALNYVPK 208 (418)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTC----------------------CCCCEEEECHHHHHHHHHH
T ss_pred eeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcccccc----ccccccccccccccccccccccccchhHHHHHHH
Confidence 344444567789999999999988999999999999753211 121 11123567888
Q ss_pred HHHHHhccc--CccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHH
Q 017176 125 AMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALL 202 (376)
Q Consensus 125 iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~ 202 (376)
++++||+.+ ++++.+...-+|+. ++.+++ ++.+++.|+++|.- . +++.+++..++++
T Consensus 209 ~v~avR~a~G~d~~l~vDaN~~~~~----~~A~~~-~~~L~~~~i~~iEq----P------------~~~~d~~~~~~l~ 267 (418)
T 3r4e_A 209 LFEELRKTYGFDHHLLHDGHHRYTP----QEAANL-GKMLEPYQLFWLED----C------------TPAENQEAFRLVR 267 (418)
T ss_dssp HHHHHHHHHCSSSEEEEECTTCSCH----HHHHHH-HHHHGGGCCSEEES----C------------SCCSSGGGGHHHH
T ss_pred HHHHHHHHcCCCCeEEEeCCCCCCH----HHHHHH-HHHHHhhCCCEEEC----C------------CCccCHHHHHHHH
Confidence 999999987 57888888877753 344443 44567889998861 1 1112245556666
Q ss_pred hhCCCCeEEEecCCCCHHHHHHHHH-cCcCeeEEc
Q 017176 203 RDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVG 236 (376)
Q Consensus 203 ~~~~~ipVi~nGgI~s~~da~~~l~-~Gad~VmiG 236 (376)
+.. ++||++.+.+.+++++.++++ ..+|.|++-
T Consensus 268 ~~~-~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~k 301 (418)
T 3r4e_A 268 QHT-VTPLAVGEIFNTIWDAKDLIQNQLIDYIRAT 301 (418)
T ss_dssp HHC-CSCEEECTTCCSGGGTHHHHHTTCCSEECCC
T ss_pred hcC-CCCEEEcCCcCCHHHHHHHHHcCCCCeEecC
Confidence 664 899999999999999999999 568998873
No 164
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=98.02 E-value=0.00011 Score=71.67 Aligned_cols=133 Identities=14% Similarity=0.164 Sum_probs=98.6
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHC-CCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEec
Q 017176 66 PIVLQIGGSNLDNLAKATELANAY-NYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCR 142 (376)
Q Consensus 66 p~~vQL~g~~~~~~~~aa~~~~~~-G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR 142 (376)
|+...+...+++.+.+.++...+. ||..+.+..|++ +++.-.+++++||+.+ ++++.|...
T Consensus 139 ~~~~t~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~----------------~~~~d~~~v~avR~a~g~~~~l~vDan 202 (383)
T 3i4k_A 139 DVTWALGVLPLDVAVAEIEERIEEFGNRSFKLKMGAG----------------DPAEDTRRVAELAREVGDRVSLRIDIN 202 (383)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHHHCCSEEEEECCSS----------------CHHHHHHHHHHHHHTTTTTSEEEEECT
T ss_pred EEeEEeeCCCHHHHHHHHHHHHHhcCCcEEEEeeCCC----------------CHHHHHHHHHHHHHHcCCCCEEEEECC
Confidence 334455566888888877766665 999999987652 4566778899999987 478999988
Q ss_pred CCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHH
Q 017176 143 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 222 (376)
Q Consensus 143 ~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da 222 (376)
-+|+. ++.+++ .+.+++.|+++|. . .+++.+++..+++.+.. ++||++.+.+.+.+++
T Consensus 203 ~~~~~----~~A~~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~ 260 (383)
T 3i4k_A 203 ARWDR----RTALHY-LPILAEAGVELFE----Q------------PTPADDLETLREITRRT-NVSVMADESVWTPAEA 260 (383)
T ss_dssp TCSCH----HHHHHH-HHHHHHTTCCEEE----S------------CSCTTCHHHHHHHHHHH-CCEEEESTTCSSHHHH
T ss_pred CCCCH----HHHHHH-HHHHHhcCCCEEE----C------------CCChhhHHHHHHHHhhC-CCCEEecCccCCHHHH
Confidence 88863 344443 4456789999886 1 11223467777777664 8999999999999999
Q ss_pred HHHHH-cCcCeeEEc
Q 017176 223 NAALR-KGAHHVMVG 236 (376)
Q Consensus 223 ~~~l~-~Gad~VmiG 236 (376)
.++++ ..+|.|++-
T Consensus 261 ~~~i~~~~~d~v~~k 275 (383)
T 3i4k_A 261 LAVVKAQAADVIALK 275 (383)
T ss_dssp HHHHHHTCCSEEEEC
T ss_pred HHHHHcCCCCEEEEc
Confidence 99998 569999983
No 165
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.02 E-value=0.00013 Score=67.54 Aligned_cols=133 Identities=15% Similarity=0.146 Sum_probs=84.5
Q ss_pred HHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcc---cCccEEEEecC-CCCCC--ccHHHH
Q 017176 81 KATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN---TNVPVSVKCRI-GVDDH--DSYNQL 154 (376)
Q Consensus 81 ~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~---~~~pv~vKiR~-g~~~~--~~~~~~ 154 (376)
..++.+.+.|+|.|++.. + .+.+ +.+.+.+.++++++. .++|+.+=..+ |.+-. .+.++
T Consensus 96 ~~ve~Ai~~Ga~~v~~~~-----n-ig~~--------~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~- 160 (263)
T 1w8s_A 96 CSVEEAVSLGASAVGYTI-----Y-PGSG--------FEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEI- 160 (263)
T ss_dssp SCHHHHHHTTCSEEEEEE-----C-TTST--------THHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHH-
T ss_pred HHHHHHHHCCCCEEEEEE-----e-cCCc--------CHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHH-
Confidence 345667788999999853 1 1111 223344444444432 36787765443 11100 02232
Q ss_pred HHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCC--CHHHHHHHH----Hc
Q 017176 155 CDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGIN--TVDEVNAAL----RK 228 (376)
Q Consensus 155 ~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~--s~~da~~~l----~~ 228 (376)
+...+++..+.|+|+|-+.- . + ..+.++++++..+.+||++.|||. |.+++.+++ +.
T Consensus 161 i~~a~~~a~~~GAD~vkt~~--~---~------------~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~a 223 (263)
T 1w8s_A 161 VAYAARIALELGADAMKIKY--T---G------------DPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEA 223 (263)
T ss_dssp HHHHHHHHHHHTCSEEEEEC--C---S------------SHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEcC--C---C------------CHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 22334566789999988762 1 1 156677777665334999999999 999988877 68
Q ss_pred CcCeeEEchHHhhCCch
Q 017176 229 GAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 229 Gad~VmiGRa~l~~P~l 245 (376)
||+|+.+||+++..|+.
T Consensus 224 GA~GvsvgraI~~~~dp 240 (263)
T 1w8s_A 224 GALGIAVGRNVWQRRDA 240 (263)
T ss_dssp TCCEEEESHHHHTSTTH
T ss_pred CCeEEEEehhhcCCcCH
Confidence 99999999999988874
No 166
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=98.02 E-value=0.00012 Score=70.65 Aligned_cols=134 Identities=5% Similarity=0.028 Sum_probs=99.7
Q ss_pred EEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCC
Q 017176 69 LQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVD 146 (376)
Q Consensus 69 vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~ 146 (376)
..+...+++.+.+.++.+.+.||..+.++.|++ ++.-.+++++||+.+ ++++.+...-+|+
T Consensus 133 ~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~g~~-----------------~~~d~~~v~avR~a~g~~~~l~vDan~~~~ 195 (354)
T 3jva_A 133 ITLGIDEPNVMAQKAVEKVKLGFDTLKIKVGTG-----------------IEADIARVKAIREAVGFDIKLRLDANQAWT 195 (354)
T ss_dssp EEECSCCHHHHHHHHHHHHHTTCSEEEEECCSC-----------------HHHHHHHHHHHHHHHCTTSEEEEECTTCSC
T ss_pred EEeCCCCHHHHHHHHHHHHHhCCCeEEEEeCCC-----------------HHHHHHHHHHHHHHcCCCCeEEEECCCCCC
Confidence 445567899999999888889999999987643 345567888888876 5788888887775
Q ss_pred CCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHH
Q 017176 147 DHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL 226 (376)
Q Consensus 147 ~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l 226 (376)
. ++.+++ .+.+++.|+++|. . .+++.+++..+++++.. ++||++.+.+.+++++.+++
T Consensus 196 ~----~~a~~~-~~~L~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l 253 (354)
T 3jva_A 196 P----KDAVKA-IQALADYQIELVE----Q------------PVKRRDLEGLKYVTSQV-NTTIMADESCFDAQDALELV 253 (354)
T ss_dssp H----HHHHHH-HHHTTTSCEEEEE----C------------CSCTTCHHHHHHHHHHC-SSEEEESTTCCSHHHHHHHH
T ss_pred H----HHHHHH-HHHHHhcCCCEEE----C------------CCChhhHHHHHHHHHhC-CCCEEEcCCcCCHHHHHHHH
Confidence 3 344444 4456778988886 1 11222467777777765 89999999999999999999
Q ss_pred H-cCcCeeEEchHHhh
Q 017176 227 R-KGAHHVMVGRAAYQ 241 (376)
Q Consensus 227 ~-~Gad~VmiGRa~l~ 241 (376)
+ ..+|.|++--.-.+
T Consensus 254 ~~~~~d~v~~k~~~~G 269 (354)
T 3jva_A 254 KKGTVDVINIKLMKCG 269 (354)
T ss_dssp HHTCCSEEEECHHHHT
T ss_pred HcCCCCEEEECchhcC
Confidence 8 67999998544433
No 167
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=98.00 E-value=6.5e-05 Score=68.85 Aligned_cols=153 Identities=14% Similarity=0.207 Sum_probs=99.9
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHCCCC--EEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEe
Q 017176 65 HPIVLQIGGSNLDNLAKATELANAYNYD--EINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKC 141 (376)
Q Consensus 65 ~p~~vQL~g~~~~~~~~aa~~~~~~G~d--~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKi 141 (376)
..+..+|...|...+.+..+.++++|+| .+|+--|.-+++. .|| -++++++|+.+ +.|+.+.+
T Consensus 28 ~~i~pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpni----t~G----------~~~v~~lr~~~p~~~ldvHL 93 (246)
T 3inp_A 28 IQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNL----TFG----------PMVLKALRDYGITAGMDVHL 93 (246)
T ss_dssp CEEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCB----CCC----------HHHHHHHHHHTCCSCEEEEE
T ss_pred CeeehhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcch----hcC----------HHHHHHHHHhCCCCeEEEEE
Confidence 3478888888988899999999999998 4566545434432 246 26677788777 78998887
Q ss_pred cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCcc-----------ccC------------------------------
Q 017176 142 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA-----------LLN------------------------------ 180 (376)
Q Consensus 142 R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~-----------~~~------------------------------ 180 (376)
-+ .+.+ +.++ . +.++|+|.|++|.-.. ..+
T Consensus 94 mv--~~p~---~~i~---~-~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMs 164 (246)
T 3inp_A 94 MV--KPVD---ALIE---S-FAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMS 164 (246)
T ss_dssp EC--SSCH---HHHH---H-HHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEEC
T ss_pred ee--CCHH---HHHH---H-HHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEee
Confidence 75 3322 2222 1 2358899999885310 000
Q ss_pred ---CCCCCCCCCCCcccHHHHHHHHhh----CCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCc
Q 017176 181 ---GISPAENRTIPPLKYEYYYALLRD----FPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 181 ---g~~~~~~~~~~~~~~~~v~~~~~~----~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~ 244 (376)
|+++ ...-+..++-++++++. ..+++|.+.|||+ .+.+.++.+.|||.+.+||++...+.
T Consensus 165 V~PGfgG---Q~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~a~d 231 (246)
T 3inp_A 165 VNPGFGG---QKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIFNSDS 231 (246)
T ss_dssp SCTTC-----CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHHTSSC
T ss_pred ecCCCCC---cccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHhCCCC
Confidence 1110 00111123444444332 2368999999997 78999999999999999999887665
No 168
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=97.97 E-value=7.7e-05 Score=73.62 Aligned_cols=135 Identities=11% Similarity=0.049 Sum_probs=99.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccc-cCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCcc
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSL-MLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDS 150 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l-~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~ 150 (376)
.+++.+++.++.+.+.||..+-++.|+|... ..|... ..+++...+++++||+.+ ++++.+...-+|+
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~-----~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~~~~---- 213 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYTA-----YSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHGQMV---- 213 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCBT-----TCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBC----
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCcc-----ccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCCCCC----
Confidence 5899999999988888999999999987531 112111 123677888999999987 5788887777775
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cC
Q 017176 151 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KG 229 (376)
Q Consensus 151 ~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~G 229 (376)
.++.+++ .+.+++.|+++|.- .+++.+++..+++++.. ++||++.+.+.+++++.++++ ..
T Consensus 214 ~~~A~~~-~~~L~~~~i~~iEe----------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a 275 (412)
T 4e4u_A 214 PSSAIRL-AKRLEKYDPLWFEE----------------PVPPGQEEAIAQVAKHT-SIPIATGERLTTKYEFHKLLQAGG 275 (412)
T ss_dssp HHHHHHH-HHHHGGGCCSEEEC----------------CSCSSCHHHHHHHHHTC-SSCEEECTTCCHHHHHHHHHHTTC
T ss_pred HHHHHHH-HHHhhhcCCcEEEC----------------CCChhhHHHHHHHHhhC-CCCEEecCccCCHHHHHHHHHcCC
Confidence 3344443 45567889988861 11223477777877764 899999999999999999998 56
Q ss_pred cCeeEE
Q 017176 230 AHHVMV 235 (376)
Q Consensus 230 ad~Vmi 235 (376)
+|.|++
T Consensus 276 ~d~v~~ 281 (412)
T 4e4u_A 276 ASILQL 281 (412)
T ss_dssp CSEECC
T ss_pred CCEEEe
Confidence 899887
No 169
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=97.97 E-value=3.7e-05 Score=69.86 Aligned_cols=155 Identities=19% Similarity=0.275 Sum_probs=96.6
Q ss_pred EEEEecCCCHHHHHHHHHHHHHCCCCEEEecC--CCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCC
Q 017176 67 IVLQIGGSNLDNLAKATELANAYNYDEINLNC--GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIG 144 (376)
Q Consensus 67 ~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~--gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g 144 (376)
++..|...|...+.+..+.+.+.|+|.|++-. |.-.++ . .+| .++++++++.++.|+.+-+-.
T Consensus 7 i~psila~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~-~---~~g----------~~~v~~lr~~~~~~~~vhlmv- 71 (230)
T 1tqj_A 7 VAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPN-I---TIG----------PLIVDAIRPLTKKTLDVHLMI- 71 (230)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSC-B---CBC----------HHHHHHHGGGCCSEEEEEEES-
T ss_pred EEEEeeecCHhHHHHHHHHHHHcCCCEEEEEEEecCCCcc-h---hhh----------HHHHHHHHhhcCCcEEEEEEc-
Confidence 67778888888899999999999999865543 221111 1 123 267888888777777755444
Q ss_pred CCCCccHHHHHHHHHHHhhcCCccEEEEccC--ccc-----------cC---CC-----CC-------------------
Q 017176 145 VDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR--KAL-----------LN---GI-----SP------------------- 184 (376)
Q Consensus 145 ~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r--~~~-----------~~---g~-----~~------------------- 184 (376)
.+.+.+.+ .+.++|+|.+++|.- ... .+ |. ++
T Consensus 72 -~dp~~~i~-------~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~~D~v~~msv 143 (230)
T 1tqj_A 72 -VEPEKYVE-------DFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCDLILIMSV 143 (230)
T ss_dssp -SSGGGTHH-------HHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESS
T ss_pred -cCHHHHHH-------HHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhcCCEEEEEEe
Confidence 22222211 122467777777765 100 00 00 00
Q ss_pred ---CCCCCCCcccHHHHHHHHhhC----CCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCch
Q 017176 185 ---AENRTIPPLKYEYYYALLRDF----PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 185 ---~~~~~~~~~~~~~v~~~~~~~----~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
.......+...+.++++++.. .++||.+-|||+. +++.++.+.|||++.+|++++..|+.
T Consensus 144 ~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~a~d~ 210 (230)
T 1tqj_A 144 NPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFNAPNY 210 (230)
T ss_dssp CC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHTSSCH
T ss_pred ccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHCCCCH
Confidence 000111222355566655432 2799999999987 99999999999999999999987763
No 170
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.96 E-value=8.5e-06 Score=75.34 Aligned_cols=79 Identities=10% Similarity=-0.008 Sum_probs=58.9
Q ss_pred HHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHH
Q 017176 160 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAA 239 (376)
Q Consensus 160 ~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~ 239 (376)
+.+++.|++.|.++.......+. ...++.+.++++.. ++||+++|+|.+.+++.++++.|||+|.+|+.+
T Consensus 37 ~~~~~~Ga~~i~v~d~~~~~~~~---------g~~~~~i~~i~~~~-~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~ 106 (266)
T 2w6r_A 37 VEVEKRGAGEILLTSIDRDGTKS---------GYDTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADKALAASVF 106 (266)
T ss_dssp HHHHHHTCSEEEEEETTTSSCSS---------CCCHHHHHHHGGGC-CSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC
T ss_pred HHHHHCCCCEEEEEecCcccCCC---------cccHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHH
Confidence 34567999999997544211111 12377888887764 899999999999999999999999999999999
Q ss_pred h-h--CCchhhH
Q 017176 240 Y-Q--NPWYTLG 248 (376)
Q Consensus 240 l-~--~P~lf~~ 248 (376)
+ . +|+.+.+
T Consensus 107 ~~~~~~~~~~~~ 118 (266)
T 2w6r_A 107 HFREIDMRELKE 118 (266)
T ss_dssp ------CHHHHH
T ss_pred HhCCCCHHHHHH
Confidence 9 6 8987543
No 171
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=97.96 E-value=4.1e-05 Score=74.09 Aligned_cols=134 Identities=10% Similarity=0.069 Sum_probs=99.6
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecC
Q 017176 66 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRI 143 (376)
Q Consensus 66 p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~ 143 (376)
|+...+...+++.+.+.++.+.+.||..+.++.|| +++.-.+.+++||+.+ ++++.+...-
T Consensus 131 ~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~G~-----------------~~~~d~~~v~avR~~~g~~~~l~vDan~ 193 (356)
T 3ro6_B 131 PTSVTIGIKPVEETLAEAREHLALGFRVLKVKLCG-----------------DEEQDFERLRRLHETLAGRAVVRVDPNQ 193 (356)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS-----------------CHHHHHHHHHHHHHHHTTSSEEEEECTT
T ss_pred eeeEEEcCCCHHHHHHHHHHHHHcCCCEEEEEeCC-----------------CHHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 44456667789999999998888999999998764 3556677888898876 5789999888
Q ss_pred CCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHH
Q 017176 144 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVN 223 (376)
Q Consensus 144 g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~ 223 (376)
+|+. ++.+++ .+.+++.|+++|. . .+++.+++.++++.+.. ++||++++.+.+++++.
T Consensus 194 ~~~~----~~a~~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~ 251 (356)
T 3ro6_B 194 SYDR----DGLLRL-DRLVQELGIEFIE----Q------------PFPAGRTDWLRALPKAI-RRRIAADESLLGPADAF 251 (356)
T ss_dssp CCCH----HHHHHH-HHHHHHTTCCCEE----C------------CSCTTCHHHHHTSCHHH-HHTEEESTTCCSHHHHH
T ss_pred CCCH----HHHHHH-HHHHHhcCCCEEE----C------------CCCCCcHHHHHHHHhcC-CCCEEeCCcCCCHHHHH
Confidence 8863 344443 3456778998885 1 11222366666655543 79999999999999999
Q ss_pred HHHH-c-CcCeeEEchH
Q 017176 224 AALR-K-GAHHVMVGRA 238 (376)
Q Consensus 224 ~~l~-~-Gad~VmiGRa 238 (376)
++++ . .+|.|++--+
T Consensus 252 ~~~~~~~~~d~v~~k~~ 268 (356)
T 3ro6_B 252 ALAAPPAACGIFNIKLM 268 (356)
T ss_dssp HHHSSSCSCSEEEECHH
T ss_pred HHHhcCCcCCEEEEccc
Confidence 9998 5 6999998444
No 172
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=97.93 E-value=8.1e-05 Score=67.51 Aligned_cols=53 Identities=17% Similarity=0.249 Sum_probs=46.3
Q ss_pred cHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCchhh
Q 017176 194 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTL 247 (376)
Q Consensus 194 ~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~ 247 (376)
+.+.+.++++...++||+.-|||+|++++.++.+ |||+|.+|+++..||..+.
T Consensus 173 ~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~~~~~~~ 225 (235)
T 3w01_A 173 DVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYKDIKKAL 225 (235)
T ss_dssp CHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHHCHHHHH
T ss_pred CHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-CCCEEEECCceecCHHHHH
Confidence 4778888776543899999999999999999888 9999999999999998753
No 173
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=97.92 E-value=0.00018 Score=65.10 Aligned_cols=145 Identities=15% Similarity=0.243 Sum_probs=92.1
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecC
Q 017176 64 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI 143 (376)
Q Consensus 64 ~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~ 143 (376)
+.++.+-|+.++|+.+.+. +.++|+|+|-+|.+.+. .+ +.++++.+++. +..+.+-+.+
T Consensus 64 ~~~~~v~lmv~d~~~~i~~---~~~agad~v~vH~~~~~---------------~~--~~~~~~~i~~~-g~~igv~~~p 122 (228)
T 1h1y_A 64 KAYLDCHLMVTNPSDYVEP---LAKAGASGFTFHIEVSR---------------DN--WQELIQSIKAK-GMRPGVSLRP 122 (228)
T ss_dssp CSEEEEEEESSCGGGGHHH---HHHHTCSEEEEEGGGCT---------------TT--HHHHHHHHHHT-TCEEEEEECT
T ss_pred CCcEEEEEEecCHHHHHHH---HHHcCCCEEEECCCCcc---------------cH--HHHHHHHHHHc-CCCEEEEEeC
Confidence 4688999999998766443 44579999999864221 11 13455555543 5666665544
Q ss_pred CCCCCccHHHHHHHHHHHhhcC--CccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHH
Q 017176 144 GVDDHDSYNQLCDFIYKVSSLS--PTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE 221 (376)
Q Consensus 144 g~~~~~~~~~~~~~i~~~~e~~--Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~d 221 (376)
..+. +.+ ..+ .+. ++|+|.+-+......|. ...+..++.+.++++...++||++.|||+. ++
T Consensus 123 ~t~~-e~~-------~~~-~~~~~~~d~vl~~sv~pg~~g~------~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~-~n 186 (228)
T 1h1y_A 123 GTPV-EEV-------FPL-VEAENPVELVLVMTVEPGFGGQ------KFMPEMMEKVRALRKKYPSLDIEVDGGLGP-ST 186 (228)
T ss_dssp TSCG-GGG-------HHH-HHSSSCCSEEEEESSCTTCSSC------CCCGGGHHHHHHHHHHCTTSEEEEESSCST-TT
T ss_pred CCCH-HHH-------HHH-HhcCCCCCEEEEEeecCCCCcc------cCCHHHHHHHHHHHHhcCCCCEEEECCcCH-HH
Confidence 3221 111 111 234 89999885433211111 112233566677766544899999999987 89
Q ss_pred HHHHHHcCcCeeEEchHHhhCCch
Q 017176 222 VNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 222 a~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
+.++++.|||+|.+|++++..|+.
T Consensus 187 i~~~~~aGaD~vvvGsai~~~~d~ 210 (228)
T 1h1y_A 187 IDVAASAGANCIVAGSSIFGAAEP 210 (228)
T ss_dssp HHHHHHHTCCEEEESHHHHTSSCH
T ss_pred HHHHHHcCCCEEEECHHHHCCCCH
Confidence 989988999999999999987763
No 174
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=97.90 E-value=9.6e-05 Score=71.68 Aligned_cols=127 Identities=12% Similarity=0.055 Sum_probs=91.7
Q ss_pred EEEEecC-CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecC
Q 017176 67 IVLQIGG-SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRI 143 (376)
Q Consensus 67 ~~vQL~g-~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~ 143 (376)
....+.. .+++++.+.|+++.+.||+.|.++.+ | +...+++++||+.+ ++++.+...-
T Consensus 132 ~~~~~g~~~~~~~~~~~a~~~~~~Gf~~vKik~~-~------------------~~~~e~v~avr~~~g~~~~l~vDan~ 192 (368)
T 1sjd_A 132 CGVSVGIMDTIPQLLDVVGGYLDEGYVRIKLKIE-P------------------GWDVEPVRAVRERFGDDVLLQVDANT 192 (368)
T ss_dssp BEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECB-T------------------TBSHHHHHHHHHHHCTTSEEEEECTT
T ss_pred ceEEeeCCCCHHHHHHHHHHHHHhCccEEEEecC-c------------------hhHHHHHHHHHHhcCCCceEEEeccC
Confidence 3344432 48999999999998999999999853 1 23356777777766 4677777776
Q ss_pred CCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHH
Q 017176 144 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVN 223 (376)
Q Consensus 144 g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~ 223 (376)
+|+.. + +++ .+.+++.|+++|. . .+++.+++..+++.+.. ++||++.+.+.++++++
T Consensus 193 ~~~~~----~-~~~-~~~l~~~~i~~iE----~------------P~~~~~~~~~~~l~~~~-~ipIa~dE~~~~~~~~~ 249 (368)
T 1sjd_A 193 AYTLG----D-APQ-LARLDPFGLLLIE----Q------------PLEEEDVLGHAELARRI-QTPICLDESIVSARAAA 249 (368)
T ss_dssp CCCGG----G-HHH-HHTTGGGCCSEEE----C------------CSCTTCHHHHHHHHTTC-SSCEEESTTCCSHHHHH
T ss_pred CCCHH----H-HHH-HHHHHhcCCCeEe----C------------CCChhhHHHHHHHHHhC-CCCEEECCCcCCHHHHH
Confidence 77642 3 333 3456788999875 1 11223477777777664 89999999999999999
Q ss_pred HHHH-cCcCeeEE
Q 017176 224 AALR-KGAHHVMV 235 (376)
Q Consensus 224 ~~l~-~Gad~Vmi 235 (376)
++++ ..+|.|++
T Consensus 250 ~~i~~~~~d~v~i 262 (368)
T 1sjd_A 250 DAIKLGAVQIVNI 262 (368)
T ss_dssp HHHHTTCCSEEEE
T ss_pred HHHHcCCCCEEEe
Confidence 9998 56899998
No 175
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=97.88 E-value=0.00019 Score=64.11 Aligned_cols=154 Identities=13% Similarity=0.218 Sum_probs=88.6
Q ss_pred EEEEecCCCHHHHHHHHHHHHHCCCCEEEecC--CC-CCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecC
Q 017176 67 IVLQIGGSNLDNLAKATELANAYNYDEINLNC--GC-PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI 143 (376)
Q Consensus 67 ~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~--gc-P~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~ 143 (376)
+...|...|+..+.++++.+.+.|+|.+.+-. |. +. + . .+| .++++++++.++.|+.+-+-+
T Consensus 6 ~~~~i~a~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~-~-~---~~g----------~~~i~~i~~~~~~~~~v~l~v 70 (220)
T 2fli_A 6 IAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVP-N-I---SFG----------ADVVASMRKHSKLVFDCHLMV 70 (220)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSS-C-B---CBC----------HHHHHHHHTTCCSEEEEEEES
T ss_pred EEEEEEeCCHHHHHHHHHHHHHcCCCEEEEEeecCCCCC-c-c---ccC----------HHHHHHHHHhCCCCEEEEEee
Confidence 45566777888899999999999999866643 33 11 1 0 112 355666676666665554322
Q ss_pred CCCCCccHHHHHHHHHHHhhcCCccEEEEccCccc----------cCC---------CC---------------------
Q 017176 144 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKAL----------LNG---------IS--------------------- 183 (376)
Q Consensus 144 g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~----------~~g---------~~--------------------- 183 (376)
.+..+. ++ .+.++|+|.+++|+.... ..| .+
T Consensus 71 --~d~~~~---i~----~~~~~gad~v~vh~~~~~~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~ 141 (220)
T 2fli_A 71 --VDPERY---VE----AFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVN 141 (220)
T ss_dssp --SSGGGG---HH----HHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGTTTCSEEEEESSC
T ss_pred --cCHHHH---HH----HHHHcCCCEEEEccCccccHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHhhCCEEEEEEEC
Confidence 222111 11 122467777777753100 000 00
Q ss_pred -CCCCCCCCcccHHHHHHHHhhC----CCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCch
Q 017176 184 -PAENRTIPPLKYEYYYALLRDF----PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 184 -~~~~~~~~~~~~~~v~~~~~~~----~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
+.+.....+..++.+.++++.. .++||++.|||+ ++++.++++.|+|+|.+||+++..+..
T Consensus 142 ~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~~~Gad~vvvGsai~~~~d~ 207 (220)
T 2fli_A 142 PGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACYEAGANVFVAGSYLFKASDL 207 (220)
T ss_dssp TTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTSSCH
T ss_pred CCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHHHcCCCEEEEChHHhCCCCH
Confidence 0000001111123344443322 268999999998 899988888999999999999887663
No 176
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=97.87 E-value=8.1e-05 Score=73.70 Aligned_cols=152 Identities=11% Similarity=0.051 Sum_probs=104.3
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCcc------ccCCCCcccccc--CCHHHHHHHHHHHhccc--Cc
Q 017176 66 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPK------VAGHGCFGVSLM--LDPKFVGEAMSVIAANT--NV 135 (376)
Q Consensus 66 p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~------v~r~g~yG~~l~--~~~~~~~eiv~~v~~~~--~~ 135 (376)
|+-..+.+.+++++++.++.+.+.||..|-+..|++... ...... |..+. ...+...+++++||+.+ ++
T Consensus 145 ~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~e~v~avR~avG~d~ 223 (422)
T 3tji_A 145 PAYSHASGETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTP-GAWFDQQEYMSNTVEMFHALREKYGWKL 223 (422)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCS-SEECCHHHHHHHHHHHHHHHHHHHCSSS
T ss_pred EEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccc-cccccchhHHHHHHHHHHHHHHHcCCCC
Confidence 443345567899999999988889999999999874210 000011 21111 12567788999999986 57
Q ss_pred cEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecC
Q 017176 136 PVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG 215 (376)
Q Consensus 136 pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGg 215 (376)
++.+...-+|+. ++.+++ ++.+++.|+++|.= .+++.+++.++++++.. ++||++.+.
T Consensus 224 ~L~vDaN~~~~~----~~A~~~-~~~Le~~~i~~iEq----------------P~~~~d~~~~~~l~~~~-~iPIa~dE~ 281 (422)
T 3tji_A 224 HILHDVHERLFP----QQAVQL-AKQLEPFQPYFIED----------------ILPPQQSAWLEQVRQQS-CVPLALGEL 281 (422)
T ss_dssp EEEEECTTCSCH----HHHHHH-HHHHGGGCCSEEEC----------------CSCGGGGGGHHHHHHHC-CCCEEECTT
T ss_pred EEEEECCCCCCH----HHHHHH-HHHHHhhCCCeEEC----------------CCChhhHHHHHHHHhhC-CCCEEEeCC
Confidence 888888877753 344443 44567889988751 11222355566777664 899999999
Q ss_pred CCCHHHHHHHHH-cCcCeeEEchHHh
Q 017176 216 INTVDEVNAALR-KGAHHVMVGRAAY 240 (376)
Q Consensus 216 I~s~~da~~~l~-~Gad~VmiGRa~l 240 (376)
+.+++++.++++ ..+|.|++--+-.
T Consensus 282 ~~~~~~~~~ll~~ga~d~v~~k~~~~ 307 (422)
T 3tji_A 282 FNNPAEWHDLIVNRRIDFIRCHVSQI 307 (422)
T ss_dssp CCSGGGTHHHHHTTCCSEECCCGGGG
T ss_pred cCCHHHHHHHHhcCCCCEEecCcccc
Confidence 999999999998 5699998744433
No 177
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=97.81 E-value=4e-05 Score=68.88 Aligned_cols=74 Identities=9% Similarity=0.065 Sum_probs=54.9
Q ss_pred hcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhC
Q 017176 163 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 242 (376)
Q Consensus 163 e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 242 (376)
.+.|+|+|.+......... . ..++..|+.+.++.+.. ++||++.||| +++++.++++.|||+|++|++++.+
T Consensus 127 ~~~gaD~i~~~~~f~~~~~-~-----g~~~~~~~~l~~~~~~~-~~pvia~GGI-~~~nv~~~~~~Ga~gv~vgs~i~~~ 198 (221)
T 1yad_A 127 EKEDADYVLFGHVFETDCK-K-----GLEGRGVSLLSDIKQRI-SIPVIAIGGM-TPDRLRDVKQAGADGIAVMSGIFSS 198 (221)
T ss_dssp HHTTCSEEEEECCC----------------CHHHHHHHHHHHC-CSCEEEESSC-CGGGHHHHHHTTCSEEEESHHHHTS
T ss_pred HhCCCCEEEECCccccCCC-C-----CCCCCCHHHHHHHHHhC-CCCEEEECCC-CHHHHHHHHHcCCCEEEEhHHhhCC
Confidence 3689999998653111000 0 00234578888887765 8999999999 9999999999999999999999887
Q ss_pred Cc
Q 017176 243 PW 244 (376)
Q Consensus 243 P~ 244 (376)
++
T Consensus 199 ~d 200 (221)
T 1yad_A 199 AE 200 (221)
T ss_dssp SS
T ss_pred CC
Confidence 66
No 178
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=97.80 E-value=0.00044 Score=67.20 Aligned_cols=123 Identities=14% Similarity=0.132 Sum_probs=93.0
Q ss_pred CHHHHHHHHHHHHHC-CCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccH
Q 017176 75 NLDNLAKATELANAY-NYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~-G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~ 151 (376)
+++.+.+.++.+.+. ||..+.+..|++ +++.-.+.+++||+.+ +.++.|...-+|+.
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~----------------~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~---- 210 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHD----------------DPNIDIARLTAVRERVDSAVRIAIDGNGKWDL---- 210 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCS----------------SHHHHHHHHHHHHHHSCTTCEEEEECTTCCCH----
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCC----------------CHHHHHHHHHHHHHHcCCCCcEEeeCCCCCCH----
Confidence 789998888888777 999999987654 2445578899999887 57888888877763
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCc
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGA 230 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Ga 230 (376)
++.+++ .+.+++.|+++|. . .+++.+++..+++.+.. ++||++.+.+.+.+++.++++ ..+
T Consensus 211 ~~a~~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~ 272 (372)
T 3tj4_A 211 PTCQRF-CAAAKDLDIYWFE----E------------PLWYDDVTSHARLARNT-SIPIALGEQLYTVDAFRSFIDAGAV 272 (372)
T ss_dssp HHHHHH-HHHTTTSCEEEEE----S------------CSCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHTTCC
T ss_pred HHHHHH-HHHHhhcCCCEEE----C------------CCCchhHHHHHHHHhhc-CCCEEeCCCccCHHHHHHHHHcCCC
Confidence 344443 4456778888875 1 11223477777777765 899999999999999999998 568
Q ss_pred CeeEE
Q 017176 231 HHVMV 235 (376)
Q Consensus 231 d~Vmi 235 (376)
|.|++
T Consensus 273 d~v~~ 277 (372)
T 3tj4_A 273 AYVQP 277 (372)
T ss_dssp SEECC
T ss_pred CEEEe
Confidence 98876
No 179
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=97.80 E-value=0.00034 Score=65.05 Aligned_cols=162 Identities=14% Similarity=0.126 Sum_probs=89.1
Q ss_pred EEEEecCC--CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCcccccc----------CCHHHHHHHHHHHhcccC
Q 017176 67 IVLQIGGS--NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLM----------LDPKFVGEAMSVIAANTN 134 (376)
Q Consensus 67 ~~vQL~g~--~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~----------~~~~~~~eiv~~v~~~~~ 134 (376)
++.=|... +.+...+.++.+.+. +|.|||. -|...... + |--.. -+.+.+.++++++|+.++
T Consensus 18 li~~i~~GdP~~~~~~~~~~~l~~~-aD~IElG--~PfsdP~a-d--Gp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~ 91 (271)
T 1ujp_A 18 LIPYLTAGFPSREGFLQAVEEVLPY-ADLLEIG--LPYSDPLG-D--GPVIQRASELALRKGMSVQGALELVREVRALTE 91 (271)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHGGG-CSSEEEE--CCCCC-------CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCC
T ss_pred EEEEecCCCCChHHHHHHHHHHHhc-CCEEEEC--CCCCCccc-c--cHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC
Confidence 44444433 456777788888888 9999995 34321100 0 11110 356777899999998888
Q ss_pred ccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccC--------------------------cc-----------
Q 017176 135 VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR--------------------------KA----------- 177 (376)
Q Consensus 135 ~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r--------------------------~~----------- 177 (376)
+|+.+ + ++.+........+++.. +.++|+|.+++-.- +.
T Consensus 92 ~Pii~-m--~y~n~v~~~g~~~f~~~-~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~ 167 (271)
T 1ujp_A 92 KPLFL-M--TYLNPVLAWGPERFFGL-FKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHA 167 (271)
T ss_dssp SCEEE-E--CCHHHHHHHCHHHHHHH-HHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTC
T ss_pred CCEEE-E--ecCcHHHHhhHHHHHHH-HHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhC
Confidence 99877 2 21110000000112111 22355554443110 00
Q ss_pred -------ccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhC
Q 017176 178 -------LLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 242 (376)
Q Consensus 178 -------~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 242 (376)
...|.++... .......+.+.++++. .++||++.|||+|++++.++ .|||+|.+|+++...
T Consensus 168 ~gfiy~vs~~G~TG~~~-~~~~~~~~~v~~vr~~-~~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGSAi~~~ 235 (271)
T 1ujp_A 168 TGFVYAVSVTGVTGMRE-RLPEEVKDLVRRIKAR-TALPVAVGFGVSGKATAAQA--AVADGVVVGSALVRA 235 (271)
T ss_dssp CSCEEEECC-------------CCHHHHHHHHTT-CCSCEEEESCCCSHHHHHHH--TTSSEEEECHHHHHH
T ss_pred CCCEEEEecCcccCCCC-CCCccHHHHHHHHHhh-cCCCEEEEcCCCCHHHHHHh--cCCCEEEEChHHhcc
Confidence 0011112111 1111124667777664 58999999999999999997 799999999998754
No 180
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=97.79 E-value=0.0001 Score=65.71 Aligned_cols=72 Identities=13% Similarity=0.085 Sum_probs=56.4
Q ss_pred cCCccEEEEccC--ccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhh
Q 017176 164 LSPTRHFIIHSR--KALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 241 (376)
Q Consensus 164 ~~Gvd~I~vh~r--~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~ 241 (376)
..|+..+.+++. +...+| ..++.+.++.+. .++|||+.||+.+++++.++++.|||+|++|++++.
T Consensus 141 ~~~~~~vli~~~~~~g~~~g-----------~~~~~i~~~~~~-~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~ 208 (237)
T 3cwo_X 141 KRGAGEILLTSIDRDGTKSG-----------YDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 208 (237)
T ss_dssp HHTCSEEEEEETTTTTCCSC-----------CCHHHHHHHGGG-CCSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred hcCCCeEEEEecCCCCcccc-----------ccHHHHHHHHHh-cCCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHc
Confidence 467777777764 222112 126677777665 489999999999999999999999999999999999
Q ss_pred CCchhh
Q 017176 242 NPWYTL 247 (376)
Q Consensus 242 ~P~lf~ 247 (376)
+||.+.
T Consensus 209 ~~~~~~ 214 (237)
T 3cwo_X 209 REIDVR 214 (237)
T ss_dssp TSSCHH
T ss_pred CCCCHH
Confidence 999853
No 181
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=97.78 E-value=0.00042 Score=62.51 Aligned_cols=143 Identities=15% Similarity=0.191 Sum_probs=86.4
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCC--CCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 64 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCG--CPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 64 ~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~g--cP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
+.|+.+-++-++++.+.+. +.++|+|+|-+|.. .+ .. ..++++.+++. +..+.+-+
T Consensus 68 ~~~~~v~l~vnd~~~~v~~---~~~~Gad~v~vh~~~~~~---------------~~---~~~~~~~~~~~-g~~ig~~~ 125 (230)
T 1rpx_A 68 DLPLDVHLMIVEPDQRVPD---FIKAGADIVSVHCEQSST---------------IH---LHRTINQIKSL-GAKAGVVL 125 (230)
T ss_dssp CSCEEEEEESSSHHHHHHH---HHHTTCSEEEEECSTTTC---------------SC---HHHHHHHHHHT-TSEEEEEE
T ss_pred CCcEEEEEEecCHHHHHHH---HHHcCCCEEEEEecCccc---------------hh---HHHHHHHHHHc-CCcEEEEe
Confidence 5688899998998755444 45689999999853 21 11 23445555443 55555555
Q ss_pred cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC----CCCeEEEecCCC
Q 017176 142 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF----PDLTFTLNGGIN 217 (376)
Q Consensus 142 R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~----~~ipVi~nGgI~ 217 (376)
..+.+. +.+ ..+ ..++|+|.+-+......|.. ..+..++.+.++++.. .++|+++.|||+
T Consensus 126 ~p~t~~-e~~-------~~~--~~~~d~vl~~~~~pg~~g~~------~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~ 189 (230)
T 1rpx_A 126 NPGTPL-TAI-------EYV--LDAVDLVLIMSVNPGFGGQS------FIESQVKKISDLRKICAERGLNPWIEVDGGVG 189 (230)
T ss_dssp CTTCCG-GGG-------TTT--TTTCSEEEEESSCTTCSSCC------CCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC
T ss_pred CCCCCH-HHH-------HHH--HhhCCEEEEEEEcCCCCCcc------ccHHHHHHHHHHHHHHHhcCCCceEEEECCCC
Confidence 544221 111 111 35799984433221111211 1111234444444332 279999999998
Q ss_pred CHHHHHHHHHcCcCeeEEchHHhhCCch
Q 017176 218 TVDEVNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 218 s~~da~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
++++.++++.|||+|.+|+++...++.
T Consensus 190 -~~n~~~~~~aGad~vvvgSaI~~a~dp 216 (230)
T 1rpx_A 190 -PKNAYKVIEAGANALVAGSAVFGAPDY 216 (230)
T ss_dssp -TTTHHHHHHHTCCEEEESHHHHTSSCH
T ss_pred -HHHHHHHHHcCCCEEEEChhhhCCCCH
Confidence 889988888999999999999987663
No 182
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.76 E-value=0.0005 Score=60.83 Aligned_cols=140 Identities=16% Similarity=0.149 Sum_probs=85.6
Q ss_pred CCCEEEEecCCC-HHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEec
Q 017176 64 QHPIVLQIGGSN-LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 142 (376)
Q Consensus 64 ~~p~~vQL~g~~-~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR 142 (376)
+.|+++-+...| ++.+. +.+.++|+|+|-+|.... .+.+.++++.+++. +.++.+-+.
T Consensus 53 ~~~i~~~l~~~di~~~~~---~~a~~~Gad~v~vh~~~~-----------------~~~~~~~~~~~~~~-g~~~gv~~~ 111 (207)
T 3ajx_A 53 DKIVFADMKTMDAGELEA---DIAFKAGADLVTVLGSAD-----------------DSTIAGAVKAAQAH-NKGVVVDLI 111 (207)
T ss_dssp TSEEEEEEEECSCHHHHH---HHHHHTTCSEEEEETTSC-----------------HHHHHHHHHHHHHH-TCEEEEECT
T ss_pred CCeEEEEEEecCccHHHH---HHHHhCCCCEEEEeccCC-----------------hHHHHHHHHHHHHc-CCceEEEEe
Confidence 567887776667 77655 566778999999885322 12234445554432 444434222
Q ss_pred CCCCCCccHHHHHHHHHHHhhcCCccEEEEc-cCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHH
Q 017176 143 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIH-SRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE 221 (376)
Q Consensus 143 ~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh-~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~d 221 (376)
+++ +..+.++ .+++.|+|++.++ +.+....|. .+.. +.++++.+. ++||++.|||+ +++
T Consensus 112 -s~~---~p~~~~~----~~~~~g~d~v~~~~~~~~~~~g~--------~~~~-~~i~~~~~~--~~pi~v~GGI~-~~~ 171 (207)
T 3ajx_A 112 -GIE---DKATRAQ----EVRALGAKFVEMHAGLDEQAKPG--------FDLN-GLLAAGEKA--RVPFSVAGGVK-VAT 171 (207)
T ss_dssp -TCS---SHHHHHH----HHHHTTCSEEEEECCHHHHTSTT--------CCTH-HHHHHHHHH--TSCEEEESSCC-GGG
T ss_pred -cCC---ChHHHHH----HHHHhCCCEEEEEecccccccCC--------CchH-HHHHHhhCC--CCCEEEECCcC-HHH
Confidence 221 2223221 1235689999555 333222221 1112 445555443 78999999997 889
Q ss_pred HHHHHHcCcCeeEEchHHhhCCc
Q 017176 222 VNAALRKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 222 a~~~l~~Gad~VmiGRa~l~~P~ 244 (376)
+.++++.|||+|.+||+++..+.
T Consensus 172 ~~~~~~aGad~vvvGsaI~~~~d 194 (207)
T 3ajx_A 172 IPAVQKAGAEVAVAGGAIYGAAD 194 (207)
T ss_dssp HHHHHHTTCSEEEESHHHHTSSS
T ss_pred HHHHHHcCCCEEEEeeeccCCCC
Confidence 99999999999999999988665
No 183
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=97.76 E-value=0.0019 Score=58.95 Aligned_cols=150 Identities=15% Similarity=0.192 Sum_probs=88.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecC-----------
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI----------- 143 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~----------- 143 (376)
+|..+ |+ ..++|+++|.+- +....|||++ +-++++++.+++||.-|==+
T Consensus 65 dp~~i---A~-~~~~GA~aiSVL--------Td~~~F~Gs~--------~~L~~vr~~v~lPvLrKDFiid~yQI~eAr~ 124 (258)
T 4a29_A 65 DPIEY---AK-FMERYAVGLSIT--------TEEKYFNGSY--------ETLRKIASSVSIPILMSDFIVKESQIDDAYN 124 (258)
T ss_dssp CHHHH---HH-HHTTTCSEEEEE--------CCSTTTCCCH--------HHHHHHHTTCSSCEEEESCCCSHHHHHHHHH
T ss_pred CHHHH---HH-HHhCCCeEEEEe--------CCCCCCCCCH--------HHHHHHHHhcCCCEeeccccccHHHHHHHHH
Confidence 56544 33 335799998774 2234467765 34677888899999877211
Q ss_pred -CCCCC------ccHHHHHHHHHHHhhcCCccEE-EEccCccc----cCCC--CCCCCCCCC--cccHHHHHHHHhhCC-
Q 017176 144 -GVDDH------DSYNQLCDFIYKVSSLSPTRHF-IIHSRKAL----LNGI--SPAENRTIP--PLKYEYYYALLRDFP- 206 (376)
Q Consensus 144 -g~~~~------~~~~~~~~~i~~~~e~~Gvd~I-~vh~r~~~----~~g~--~~~~~~~~~--~~~~~~v~~~~~~~~- 206 (376)
|-|-. -+-.++.++ ...+.+.|.+.+ .||..... .-|. -+-+++... ..+.+...++....|
T Consensus 125 ~GADaILLI~a~L~~~~l~~l-~~~A~~lGl~~LvEVh~~~El~rAl~~~a~iIGINNRnL~tf~vdl~~t~~L~~~ip~ 203 (258)
T 4a29_A 125 LGADTVLLIVKILTERELESL-LEYARSYGMEPLILINDENDLDIALRIGARFIGIMSRDFETGEINKENQRKLISMIPS 203 (258)
T ss_dssp HTCSEEEEEGGGSCHHHHHHH-HHHHHHTTCCCEEEESSHHHHHHHHHTTCSEEEECSBCTTTCCBCHHHHHHHHTTSCT
T ss_pred cCCCeeehHHhhcCHHHHHHH-HHHHHHHhHHHHHhcchHHHHHHHhcCCCcEEEEeCCCccccccCHHHHHHHHhhCCC
Confidence 11100 011112221 223344565543 35543210 0010 012223222 234555667776665
Q ss_pred CCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCch
Q 017176 207 DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 207 ~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
++.+|+-+||.+++|+.++.+.|+|+|.||.+++.+|+-
T Consensus 204 ~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr~~d~ 242 (258)
T 4a29_A 204 NVVKVAKLGISERNEIEELRKLGVNAFLISSSLMRNPEK 242 (258)
T ss_dssp TSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHHCTTH
T ss_pred CCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhCCCcH
Confidence 688999999999999999999999999999999999973
No 184
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=97.76 E-value=0.00013 Score=71.40 Aligned_cols=124 Identities=13% Similarity=0.089 Sum_probs=94.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCcc
Q 017176 73 GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDS 150 (376)
Q Consensus 73 g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~ 150 (376)
|.+++++++.++.+.+.||+.+.++.|+ +++.-.+.+++||+.+ +.++.|...-+|+.
T Consensus 153 g~~~e~~~~~a~~~~~~G~~~iKlK~g~-----------------~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~--- 212 (392)
T 3ddm_A 153 GINPENPEDVVARKAAEGYRAFKLKVGF-----------------DDARDVRNALHVRELLGAATPLMADANQGWDL--- 212 (392)
T ss_dssp EECSSSHHHHHHHHHHHTCCCEEEECSS-----------------CHHHHHHHHHHHHHHHCSSSCEEEECTTCCCH---
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCC-----------------CHHHHHHHHHHHHHhcCCCceEEEeCCCCCCH---
Confidence 4457889999998888899999997653 3566778899999886 57899988888863
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCccc-HHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-c
Q 017176 151 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK-YEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-K 228 (376)
Q Consensus 151 ~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~-~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~ 228 (376)
++.+++ .+.+++.|+++|. . .+++.+ ++..+++++.. ++||.+.+.+.+.+++.++++ .
T Consensus 213 -~~A~~~-~~~L~~~~i~~iE----e------------P~~~~d~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~ 273 (392)
T 3ddm_A 213 -PRARQM-AQRLGPAQLDWLE----E------------PLRADRPAAEWAELAQAA-PMPLAGGENIAGVAAFETALAAR 273 (392)
T ss_dssp -HHHHHH-HHHHGGGCCSEEE----C------------CSCTTSCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHHT
T ss_pred -HHHHHH-HHHHHHhCCCEEE----C------------CCCccchHHHHHHHHHhc-CCCEEeCCCCCCHHHHHHHHHcC
Confidence 344443 4556788999886 1 112234 66677777765 899999999999999999998 5
Q ss_pred CcCeeEE
Q 017176 229 GAHHVMV 235 (376)
Q Consensus 229 Gad~Vmi 235 (376)
.+|.|++
T Consensus 274 a~d~v~~ 280 (392)
T 3ddm_A 274 SLRVMQP 280 (392)
T ss_dssp CEEEECC
T ss_pred CCCEEEe
Confidence 6888876
No 185
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=97.74 E-value=0.0005 Score=67.29 Aligned_cols=138 Identities=9% Similarity=0.056 Sum_probs=102.0
Q ss_pred CEEEEec----CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEE-
Q 017176 66 PIVLQIG----GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVS- 138 (376)
Q Consensus 66 p~~vQL~----g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~- 138 (376)
|+-..+. ..+++.+++.++.+.+.||+.+.++.|+ +++.-.+.+++||+.+ ++++.
T Consensus 129 ~~y~t~~~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvG~-----------------~~~~d~~~v~avR~a~g~~~~l~~ 191 (391)
T 3gd6_A 129 KVCYPIFRHRFSEEVESNLDVVRQKLEQGFDVFRLYVGK-----------------NLDADEEFLSRVKEEFGSRVRIKS 191 (391)
T ss_dssp EBCEEECCCSSTTHHHHHHHHHHHHHHTTCCEEEEECSS-----------------CHHHHHHHHHHHHHHHGGGCEEEE
T ss_pred EeeEEecccccCCCHHHHHHHHHHHHHcCCCEEEEeeCC-----------------CHHHHHHHHHHHHHHcCCCCcEEE
Confidence 4445555 5679999999999888999999998765 2456678888998876 56788
Q ss_pred EEecCCCCCCccHHHHHHHHHHHhhcCCc--cEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCC
Q 017176 139 VKCRIGVDDHDSYNQLCDFIYKVSSLSPT--RHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGI 216 (376)
Q Consensus 139 vKiR~g~~~~~~~~~~~~~i~~~~e~~Gv--d~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI 216 (376)
+...-+|+ .++.+++ .+.+++.|+ ++|. . .+++.+++.++++++.. ++|| ...+
T Consensus 192 vDan~~~~----~~~A~~~-~~~l~~~~i~~~~iE----q------------P~~~~d~~~~~~l~~~~-~iPI--dE~~ 247 (391)
T 3gd6_A 192 YDFSHLLN----WKDAHRA-IKRLTKYDLGLEMIE----S------------PAPRNDFDGLYQLRLKT-DYPI--SEHV 247 (391)
T ss_dssp EECTTCSC----HHHHHHH-HHHHTTCCSSCCEEE----C------------CSCTTCHHHHHHHHHHC-SSCE--EEEC
T ss_pred ecCCCCcC----HHHHHHH-HHHHHhcCCCcceec----C------------CCChhhHHHHHHHHHHc-CCCc--CCCC
Confidence 88777775 3344443 456678898 7776 1 11222477777887765 8999 8899
Q ss_pred CCHHHHHHHHH-cCcCeeEEchHHhhCCc
Q 017176 217 NTVDEVNAALR-KGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 217 ~s~~da~~~l~-~Gad~VmiGRa~l~~P~ 244 (376)
.+.+++.++++ ..+|.|++--+-.+-..
T Consensus 248 ~~~~~~~~~~~~~~~d~v~~k~~~~GGit 276 (391)
T 3gd6_A 248 WSFKQQQEMIKKDAIDIFNISPVFIGGLT 276 (391)
T ss_dssp CCHHHHHHHHHHTCCSEEEECHHHHTSHH
T ss_pred CCHHHHHHHHHcCCCCEEEECchhcCCHH
Confidence 99999999998 66999999776665544
No 186
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.74 E-value=0.00014 Score=71.28 Aligned_cols=103 Identities=14% Similarity=0.202 Sum_probs=72.1
Q ss_pred CHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHH
Q 017176 118 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 197 (376)
Q Consensus 118 ~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~ 197 (376)
+++.+.++++.+++. +.++.++++.. ...+.+ +.++++|+|.+.+|+..... .... +...|..
T Consensus 140 d~~~~~~~i~~~~~~-g~~v~~~v~~~-----~~~e~a----~~~~~agad~i~i~~~~~~~-~~~~------~~~~~~~ 202 (393)
T 2qr6_A 140 DTELLSERIAQVRDS-GEIVAVRVSPQ-----NVREIA----PIVIKAGADLLVIQGTLISA-EHVN------TGGEALN 202 (393)
T ss_dssp CHHHHHHHHHHHHHT-TSCCEEEECTT-----THHHHH----HHHHHTTCSEEEEECSSCCS-SCCC------C-----C
T ss_pred CHHHHHHHHHHHhhc-CCeEEEEeCCc-----cHHHHH----HHHHHCCCCEEEEeCCcccc-ccCC------CcccHHH
Confidence 788889999998876 88999988752 122322 23446899999999754211 1111 1113555
Q ss_pred HHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHH
Q 017176 198 YYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAA 239 (376)
Q Consensus 198 v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~ 239 (376)
+.++++.. ++|||+ |+|.|++++..+++.|||+|++|+|.
T Consensus 203 i~~l~~~~-~~pvi~-ggi~t~e~a~~~~~~Gad~i~vg~Gg 242 (393)
T 2qr6_A 203 LKEFIGSL-DVPVIA-GGVNDYTTALHMMRTGAVGIIVGGGE 242 (393)
T ss_dssp HHHHHHHC-SSCEEE-ECCCSHHHHHHHHTTTCSEEEESCCS
T ss_pred HHHHHHhc-CCCEEE-CCcCCHHHHHHHHHcCCCEEEECCCc
Confidence 66777765 899999 99999999999999999999998843
No 187
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=97.73 E-value=0.00047 Score=66.91 Aligned_cols=131 Identities=6% Similarity=0.089 Sum_probs=96.4
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecC
Q 017176 66 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRI 143 (376)
Q Consensus 66 p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~ 143 (376)
|....+...+++.+.+.++.+.+.||..+-+..|+ +++.-.+.+++||+.+ ++++.|...-
T Consensus 131 ~~~~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~-----------------~~~~d~~~v~avR~~~g~~~~l~vDaN~ 193 (368)
T 3q45_A 131 QTDYTVSIDEPHKMAADAVQIKKNGFEIIKVKVGG-----------------SKELDVERIRMIREAAGDSITLRIDANQ 193 (368)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCS-----------------CHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred eeEEEecCCCHHHHHHHHHHHHHcCCCeEEEEecC-----------------CHHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 34455666789999999988888999999987653 2455678888998876 5778888777
Q ss_pred CCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHH
Q 017176 144 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVN 223 (376)
Q Consensus 144 g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~ 223 (376)
+|+. ++.+++ .+.+++.|+++|. .+ +++.+++..+++.+.. ++||.+.+.+.+++++.
T Consensus 194 ~~~~----~~A~~~-~~~l~~~~i~~iE----qP------------~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~ 251 (368)
T 3q45_A 194 GWSV----ETAIET-LTLLEPYNIQHCE----EP------------VSRNLYTALPKIRQAC-RIPIMADESCCNSFDAE 251 (368)
T ss_dssp CBCH----HHHHHH-HHHHGGGCCSCEE----CC------------BCGGGGGGHHHHHHTC-SSCEEESTTCCSHHHHH
T ss_pred CCCh----HHHHHH-HHHHhhcCCCEEE----CC------------CChhHHHHHHHHHhhC-CCCEEEcCCcCCHHHHH
Confidence 7753 344444 4456778998875 11 1222345556666654 89999999999999999
Q ss_pred HHHH-cCcCeeEE
Q 017176 224 AALR-KGAHHVMV 235 (376)
Q Consensus 224 ~~l~-~Gad~Vmi 235 (376)
++++ ..+|.|++
T Consensus 252 ~~~~~~~~d~v~~ 264 (368)
T 3q45_A 252 RLIQIQACDSFNL 264 (368)
T ss_dssp HHHHTTCCSEEEE
T ss_pred HHHHcCCCCeEEe
Confidence 9998 67999987
No 188
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=97.72 E-value=0.00071 Score=65.84 Aligned_cols=133 Identities=7% Similarity=0.091 Sum_probs=96.3
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecC
Q 017176 66 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRI 143 (376)
Q Consensus 66 p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~ 143 (376)
|+...+...+++.+.+.++...+.||..+-+..|+. +++.-.+.+++||+.+ ++++.|...-
T Consensus 137 ~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~----------------~~~~d~~~v~avR~~~g~~~~l~vDan~ 200 (377)
T 3my9_A 137 PLSFSIADPDFDADLERMRAMVPAGHTVFKMKTGVK----------------PHAEELRILETMRGEFGERIDLRLDFNQ 200 (377)
T ss_dssp EBCEEECCSSHHHHHHHHHHHTTTTCCEEEEECSSS----------------CHHHHHHHHHHHHHHHGGGSEEEEECTT
T ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCCEEEEccCCC----------------cHHHHHHHHHHHHHHhCCCCeEEEeCCC
Confidence 333444456788888777777777999999876531 3455677888888876 5789999888
Q ss_pred CCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHH
Q 017176 144 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVN 223 (376)
Q Consensus 144 g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~ 223 (376)
+|+.. +..++ .+.+++.|+++|. . .+++.+++..+++.+.. ++||.+.+.+.+.+++.
T Consensus 201 ~~~~~-~A~~~----~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~ 258 (377)
T 3my9_A 201 ALTPF-GAMKI----LRDVDAFRPTFIE----Q------------PVPRRHLDAMAGFAAAL-DTPILADESCFDAVDLM 258 (377)
T ss_dssp CCCTT-THHHH----HHHHHTTCCSCEE----C------------CSCTTCHHHHHHHHHHC-SSCEEESTTCSSHHHHH
T ss_pred CcCHH-HHHHH----HHHHhhcCCCEEE----C------------CCCccCHHHHHHHHHhC-CCCEEECCccCCHHHHH
Confidence 88753 22222 3455678998875 0 11223477777887765 89999999999999999
Q ss_pred HHHH-cCcCeeEEc
Q 017176 224 AALR-KGAHHVMVG 236 (376)
Q Consensus 224 ~~l~-~Gad~VmiG 236 (376)
++++ ..+|.|++-
T Consensus 259 ~~i~~~~~d~v~~k 272 (377)
T 3my9_A 259 EVVRRQAADAISVK 272 (377)
T ss_dssp HHHHHTCCSEEECC
T ss_pred HHHHcCCCCEEEec
Confidence 9998 669998873
No 189
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=97.71 E-value=0.00036 Score=69.03 Aligned_cols=146 Identities=13% Similarity=0.183 Sum_probs=102.2
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCcccc------------c--------cCCHHHHHHH
Q 017176 66 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVS------------L--------MLDPKFVGEA 125 (376)
Q Consensus 66 p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~------------l--------~~~~~~~~ei 125 (376)
|+-.-+.+.+++++++.++.+.+.||..+-+..|.|... ..||.. . ..+.+...++
T Consensus 140 ~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~----~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~ 215 (424)
T 3v3w_A 140 LSYTHANGKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIA----KTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDV 215 (424)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCS----CCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHH
T ss_pred eEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCcccc----ccccccccccccccccccccccccccchhHHHHHHHH
Confidence 343345567899999999988889999999998875311 011110 0 0125677889
Q ss_pred HHHHhccc--CccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHh
Q 017176 126 MSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLR 203 (376)
Q Consensus 126 v~~v~~~~--~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~ 203 (376)
+++||+.+ ++++.|...-+|+. ++.+++ ++.+++.|+++|.- . +++.+++..+++++
T Consensus 216 v~avR~avG~d~~l~vDaN~~~~~----~~A~~~-~~~L~~~~i~~iEq----P------------~~~~d~~~~~~l~~ 274 (424)
T 3v3w_A 216 FAAVRKEFGPDIHLLHDVHHRLTP----IEAARL-GKALEPYHLFWMED----A------------VPAENQESFKLIRQ 274 (424)
T ss_dssp HHHHHHHHCSSSEEEEECTTCCCH----HHHHHH-HHHHGGGCCSEEEC----C------------SCCSSTTHHHHHHH
T ss_pred HHHHHHHcCCCCcEEEeCCCCCCH----HHHHHH-HHHHHhcCCCEEEC----C------------CChHhHHHHHHHHh
Confidence 99999987 57888887777753 344444 44567889998861 1 11223555667776
Q ss_pred hCCCCeEEEecCCCCHHHHHHHHH-cCcCeeEEch
Q 017176 204 DFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGR 237 (376)
Q Consensus 204 ~~~~ipVi~nGgI~s~~da~~~l~-~Gad~VmiGR 237 (376)
.. ++||++.+.+.+++++.++++ ..+|.|++--
T Consensus 275 ~~-~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~ 308 (424)
T 3v3w_A 275 HT-TTPLAVGEVFNSIHDCRELIQNQWIDYIRTTI 308 (424)
T ss_dssp HC-CSCEEECTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred hC-CCCEEEccCcCCHHHHHHHHHcCCCCeEeecc
Confidence 64 899999999999999999999 5589988743
No 190
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=97.69 E-value=0.0007 Score=66.23 Aligned_cols=132 Identities=17% Similarity=0.144 Sum_probs=97.0
Q ss_pred CEEEEecC---CCHHHHHHHHHHHHHC---CCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccE
Q 017176 66 PIVLQIGG---SNLDNLAKATELANAY---NYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPV 137 (376)
Q Consensus 66 p~~vQL~g---~~~~~~~~aa~~~~~~---G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv 137 (376)
|+-..+.+ .+++.+++.++...+. ||..+-+..|.+ +++.-.+.+++||+.+ ++++
T Consensus 159 ~~y~s~g~~~~~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~----------------~~~~d~~~v~avR~a~G~~~~l 222 (390)
T 3ugv_A 159 KAYNSNGLWLKSPAEVAAEAVELKAEGQGTGFKGLKLRMGRD----------------DPAVDIETAEAVWDAVGRDTAL 222 (390)
T ss_dssp EEEECSCCCSSCHHHHHHHHHHHHHTTCTTCCSEEEEECCCS----------------SHHHHHHHHHHHHHHHCTTSEE
T ss_pred EEEEecccccCCCHHHHHHHHHHHHHhhhCCCcEEEEecCCC----------------CHHHHHHHHHHHHHHhCCCCEE
Confidence 44444444 5789999988888888 999999876542 3556678888898876 5788
Q ss_pred EEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCC
Q 017176 138 SVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGIN 217 (376)
Q Consensus 138 ~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~ 217 (376)
.|...-+|+. ++.+++ .+.+++.|+++|. . .+++.+++.++++.+.. ++||.+...+.
T Consensus 223 ~vDaN~~~~~----~~A~~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~ 280 (390)
T 3ugv_A 223 MVDFNQGLDM----AEAMHR-TRQIDDLGLEWIE----E------------PVVYDNFDGYAQLRHDL-KTPLMIGENFY 280 (390)
T ss_dssp EEECTTCCCH----HHHHHH-HHHHTTSCCSEEE----C------------CSCTTCHHHHHHHHHHC-SSCEEECTTCC
T ss_pred EEECCCCCCH----HHHHHH-HHHHHhhCCCEEE----C------------CCCcccHHHHHHHHHhc-CCCEEeCCCcC
Confidence 8888877763 344444 4456788998875 1 11223467777877765 89999999999
Q ss_pred CHHHHHHHHH-cCcCeeEE
Q 017176 218 TVDEVNAALR-KGAHHVMV 235 (376)
Q Consensus 218 s~~da~~~l~-~Gad~Vmi 235 (376)
+.+++.++++ ..+|.|++
T Consensus 281 ~~~~~~~~i~~~a~d~v~i 299 (390)
T 3ugv_A 281 GPREMHQALQAGACDLVMP 299 (390)
T ss_dssp SHHHHHHHHHTTCCSEECC
T ss_pred CHHHHHHHHHcCCCCEEEe
Confidence 9999999998 56898876
No 191
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=97.68 E-value=0.00063 Score=66.02 Aligned_cols=122 Identities=9% Similarity=0.067 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHHH
Q 017176 76 LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQ 153 (376)
Q Consensus 76 ~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 153 (376)
++.+.++++.+++.||..+.+..|+. +++.-.+.+++||+.+ +.++.+...-+|+.. +
T Consensus 144 ~~~~~~~~~~~~~~G~~~~KiKvg~~----------------~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~----~ 203 (370)
T 1chr_A 144 KRDLDSAVEMIERRRHNRFKVKLGFR----------------SPQDDLIHMEALSNSLGSKAYLRVDVNQAWDEQ----V 203 (370)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEECSSS----------------CSHHHHHHHHHHHHHSSTTCCEEEECTTCCCTT----H
T ss_pred HHHHHHHHHHHHHCCCCEEEEecCCC----------------CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHH----H
Confidence 45566676777768999999876542 3455677889999887 478999999888753 2
Q ss_pred HHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcCe
Q 017176 154 LCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHH 232 (376)
Q Consensus 154 ~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad~ 232 (376)
.+++ .+.+++.|+++|. . .+++.+++.++++.+.. ++||.+.+.+.+.+++.++++ ..+|.
T Consensus 204 a~~~-~~~l~~~~i~~iE----q------------P~~~~~~~~~~~l~~~~-~iPia~dE~~~~~~~~~~~~~~~~~d~ 265 (370)
T 1chr_A 204 ASVY-IPELEALGVELIE----Q------------PVGRENTQALRRLSDNN-RVAIMADESLSTLASAFDLARDRSVDV 265 (370)
T ss_dssp HHHH-THHHHTTTEEEEE----C------------CSCTTCHHHHHHHHHHS-CSEEEESSSCCSHHHHHHHHTTTSCSE
T ss_pred HHHH-HHHHHhcCCCEEE----C------------CCCcccHHHHHHHHhhC-CCCEEeCCCcCCHHHHHHHHHcCCCCE
Confidence 3332 3456678998875 1 11223467777777765 899999999999999999998 56999
Q ss_pred eEE
Q 017176 233 VMV 235 (376)
Q Consensus 233 Vmi 235 (376)
|++
T Consensus 266 v~~ 268 (370)
T 1chr_A 266 FSL 268 (370)
T ss_dssp EEE
T ss_pred EEE
Confidence 988
No 192
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=97.66 E-value=0.001 Score=64.94 Aligned_cols=132 Identities=9% Similarity=0.017 Sum_probs=97.0
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHC-CCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEec
Q 017176 66 PIVLQIGGSNLDNLAKATELANAY-NYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCR 142 (376)
Q Consensus 66 p~~vQL~g~~~~~~~~aa~~~~~~-G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR 142 (376)
|+-..+...+++.+++.++.+.+. ||..+-+..|++ +++.-.+.+++||+.+ ++++.+...
T Consensus 158 ~~y~s~g~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~----------------~~~~d~~~v~avR~a~G~~~~l~vDaN 221 (383)
T 3toy_A 158 PAYDSYGVLDARDDERTLRTACDEHGFRAIKSKGGHG----------------DLATDEAMIKGLRALLGPDIALMLDFN 221 (383)
T ss_dssp EEEEECSSCCHHHHHHHHHHHHHTSCCCEEEEECCSS----------------CHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred EEeEecCCCCHHHHHHHHHHHHHccCCcEEEEecCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 444444446899999999888888 999999876542 3556678888898876 578888888
Q ss_pred CCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHH
Q 017176 143 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 222 (376)
Q Consensus 143 ~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da 222 (376)
-+|+. ++.+++ .+.+++.|+++|. . .+++.+++..+++.+.. ++||.+...+.+.+++
T Consensus 222 ~~~~~----~~A~~~-~~~l~~~~i~~iE----e------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~ 279 (383)
T 3toy_A 222 QSLDP----AEATRR-IARLADYDLTWIE----E------------PVPQENLSGHAAVRERS-EIPIQAGENWWFPRGF 279 (383)
T ss_dssp TCSCH----HHHHHH-HHHHGGGCCSEEE----C------------CSCTTCHHHHHHHHHHC-SSCEEECTTCCHHHHH
T ss_pred CCCCH----HHHHHH-HHHHHhhCCCEEE----C------------CCCcchHHHHHHHHhhc-CCCEEeCCCcCCHHHH
Confidence 77763 344444 4456778998875 1 11223467777877765 8999999999999999
Q ss_pred HHHHH-cCcCeeEE
Q 017176 223 NAALR-KGAHHVMV 235 (376)
Q Consensus 223 ~~~l~-~Gad~Vmi 235 (376)
.++++ ..+|.|++
T Consensus 280 ~~~i~~~a~d~v~i 293 (383)
T 3toy_A 280 AEAIAAGASDFIMP 293 (383)
T ss_dssp HHHHHHTCCSEECC
T ss_pred HHHHHcCCCCEEEe
Confidence 99998 56898875
No 193
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=97.64 E-value=0.00085 Score=65.02 Aligned_cols=132 Identities=9% Similarity=0.073 Sum_probs=95.4
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHC-CCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEec
Q 017176 66 PIVLQIGGSNLDNLAKATELANAY-NYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCR 142 (376)
Q Consensus 66 p~~vQL~g~~~~~~~~aa~~~~~~-G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR 142 (376)
|+...+...+++.+.+.++.+.+. ||..+-+..|... .+.-.+++++||+.+ +.++.+...
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~K~g~~~----------------~~~d~~~v~avR~a~g~~~~l~vDan 193 (367)
T 3dg3_A 130 RVSHMLGFDDPVKMVAEAERIRETYGINTFKVKVGRRP----------------VQLDTAVVRALRERFGDAIELYVDGN 193 (367)
T ss_dssp EEEEEEESSCHHHHHHHHHHHHHHHCCCEEEEECCCSS----------------THHHHHHHHHHHHHHGGGSEEEEECT
T ss_pred EEEEEecCCCHHHHHHHHHHHHHhcCccEEEEeeCCCh----------------hhhHHHHHHHHHHHhCCCCEEEEECC
Confidence 444556667899999888887777 9999999765411 013456788888876 568888877
Q ss_pred CCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHH
Q 017176 143 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 222 (376)
Q Consensus 143 ~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da 222 (376)
-+|+. ++.+++ .+.+++.|+++|. . .+++.+++..+++++.. ++||++.+.+.+.+++
T Consensus 194 ~~~~~----~~a~~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~ 251 (367)
T 3dg3_A 194 RGWSA----AESLRA-MREMADLDLLFAE----E------------LCPADDVLSRRRLVGQL-DMPFIADESVPTPADV 251 (367)
T ss_dssp TCSCH----HHHHHH-HHHTTTSCCSCEE----S------------CSCTTSHHHHHHHHHHC-SSCEEECTTCSSHHHH
T ss_pred CCCCH----HHHHHH-HHHHHHhCCCEEE----C------------CCCcccHHHHHHHHHhC-CCCEEecCCcCCHHHH
Confidence 77753 344443 4566788988876 1 11222366677777765 8999999999999999
Q ss_pred HHHHH-cCcCeeEE
Q 017176 223 NAALR-KGAHHVMV 235 (376)
Q Consensus 223 ~~~l~-~Gad~Vmi 235 (376)
.++++ ..+|.|++
T Consensus 252 ~~~i~~~~~d~v~~ 265 (367)
T 3dg3_A 252 TREVLGGSATAISI 265 (367)
T ss_dssp HHHHHHTSCSEEEE
T ss_pred HHHHHcCCCCEEEe
Confidence 99998 56899987
No 194
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=97.64 E-value=0.00036 Score=69.06 Aligned_cols=146 Identities=10% Similarity=0.046 Sum_probs=100.1
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCcccc-----cc---------------CCHHHHHHH
Q 017176 66 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVS-----LM---------------LDPKFVGEA 125 (376)
Q Consensus 66 p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~-----l~---------------~~~~~~~ei 125 (376)
|+-.-+.+.+++++++.++.+.+.||..+-+..|.|... ..||.. .. ...+...++
T Consensus 141 ~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~----~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~ 216 (425)
T 3vcn_A 141 TVYGHANGETIEDTIAEAVKYKAMGYKAIRLQTGVPGLA----STYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKL 216 (425)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCS----CCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHH
T ss_pred eEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeecCcccc----ccccccccccccCcccccccccccccchhHHHHHHHH
Confidence 343345567899999999988889999999998874310 011110 00 013456778
Q ss_pred HHHHhccc--CccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHh
Q 017176 126 MSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLR 203 (376)
Q Consensus 126 v~~v~~~~--~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~ 203 (376)
+++||+.+ ++++.|...-+|+ .++.+++ ++.+++.|+++|.- . +++.+++..+++++
T Consensus 217 v~avR~a~G~d~~l~vDaN~~~~----~~~A~~~-~~~L~~~~i~~iEq----P------------~~~~d~~~~~~l~~ 275 (425)
T 3vcn_A 217 FERAREVLGWDVHLLHDVHHRLT----PIEAARL-GKDLEPYRLFWLED----S------------VPAENQAGFRLIRQ 275 (425)
T ss_dssp HHHHHHHHCSSSEEEEECTTCCC----HHHHHHH-HHHHGGGCCSEEEC----C------------SCCSSTTHHHHHHH
T ss_pred HHHHHHHcCCCCEEEEECCCCCC----HHHHHHH-HHHHHhcCCCEEEC----C------------CChhhHHHHHHHHh
Confidence 88888886 5788888777775 3344443 45567889998861 1 11223555667776
Q ss_pred hCCCCeEEEecCCCCHHHHHHHHH-cCcCeeEEch
Q 017176 204 DFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGR 237 (376)
Q Consensus 204 ~~~~ipVi~nGgI~s~~da~~~l~-~Gad~VmiGR 237 (376)
.. ++||++.+.+.+++++.++++ ..+|.|++--
T Consensus 276 ~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~ 309 (425)
T 3vcn_A 276 HT-TTPLAVGEIFAHVWDAKQLIEEQLIDYLRATV 309 (425)
T ss_dssp HC-CSCEEECTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred cC-CCCEEeCCCcCCHHHHHHHHHcCCCCeEecCh
Confidence 64 899999999999999999999 5589988743
No 195
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.64 E-value=0.0014 Score=61.59 Aligned_cols=149 Identities=15% Similarity=0.182 Sum_probs=85.7
Q ss_pred CCCEEEEecCCCH-------HHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCcc
Q 017176 64 QHPIVLQIGGSNL-------DNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVP 136 (376)
Q Consensus 64 ~~p~~vQL~g~~~-------~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~p 136 (376)
+.|+++.|.+++. +.+...++.+.+.|+|+|.++. + .+.+.+. ...+.+.+++++..+ .++|
T Consensus 105 ~~~lil~l~~~t~~~~~~~~~~l~~~ve~Av~~GAdaV~~~i-----~-~Gs~~~~----~~l~~i~~v~~~a~~-~Glp 173 (295)
T 3glc_A 105 NRPVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQV-----Y-IGSEYEH----QSIKNIIQLVDAGMK-VGMP 173 (295)
T ss_dssp CCCEEEECEECCCTTSCTTCCEECSCHHHHHHTTCSEEEEEE-----C-TTSTTHH----HHHHHHHHHHHHHHT-TTCC
T ss_pred CccEEEEEcCCCcCCCCCccchhHHHHHHHHHCCCCEEEEEE-----E-CCCCcHH----HHHHHHHHHHHHHHH-cCCE
Confidence 5678888875431 1122245556688999998853 1 1111111 111234445555433 3688
Q ss_pred EEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCC
Q 017176 137 VSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGI 216 (376)
Q Consensus 137 v~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI 216 (376)
+.+=...|.....+ .+.+...+++..+.|+|+|-+.- .+ +.+.++++.. .+||++.||+
T Consensus 174 vIie~~~G~~~~~d-~e~i~~aariA~elGAD~VKt~~-----t~--------------e~~~~vv~~~-~vPVv~~GG~ 232 (295)
T 3glc_A 174 TMAVTGVGKDMVRD-QRYFSLATRIAAEMGAQIIKTYY-----VE--------------KGFERIVAGC-PVPIVIAGGK 232 (295)
T ss_dssp EEEEECC----CCS-HHHHHHHHHHHHHTTCSEEEEEC-----CT--------------TTHHHHHHTC-SSCEEEECCS
T ss_pred EEEECCCCCccCCC-HHHHHHHHHHHHHhCCCEEEeCC-----CH--------------HHHHHHHHhC-CCcEEEEECC
Confidence 87744333211111 23333345667789999988751 11 0124455443 7999999999
Q ss_pred C-CHHH----HHHHHHcCcCeeEEchHHhhCCc
Q 017176 217 N-TVDE----VNAALRKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 217 ~-s~~d----a~~~l~~Gad~VmiGRa~l~~P~ 244 (376)
. +.++ +.++++.||+||.+||.++..|.
T Consensus 233 ~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~d 265 (295)
T 3glc_A 233 KLPEREALEMCWQAIDQGASGVDMGRNIFQSDH 265 (295)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSS
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcC
Confidence 8 4444 44555689999999999997654
No 196
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=97.62 E-value=0.0017 Score=64.52 Aligned_cols=152 Identities=9% Similarity=0.059 Sum_probs=102.8
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCcc-----------ccCCCC------------ccccc--cCCHH
Q 017176 66 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPK-----------VAGHGC------------FGVSL--MLDPK 120 (376)
Q Consensus 66 p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~-----------v~r~g~------------yG~~l--~~~~~ 120 (376)
|+-.-+.+.+++++++.++.+.+.||..+-+..|..... +. .+. -|..+ ....+
T Consensus 146 ~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (440)
T 3t6c_A 146 ALYVHTDGADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMV-KAKNIQPKRSPRTKAPGIYFDPEAYAK 224 (440)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBC-CCSSCCCCCCCSSCCSSEECCHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccc-cccccccccccccccccccccchhhHH
Confidence 444445677899999999988889999999988743200 00 000 01000 01146
Q ss_pred HHHHHHHHHhccc--CccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHH
Q 017176 121 FVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYY 198 (376)
Q Consensus 121 ~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v 198 (376)
...+++++||+.+ ++++.|...-+|+. ++.+++ .+.+++.|+++|. . .+++.+++.+
T Consensus 225 ~d~~~v~avR~a~G~d~~L~vDaN~~~~~----~~A~~~-~~~L~~~~i~~iE----e------------P~~~~d~~~~ 283 (440)
T 3t6c_A 225 SIPRLFDHLRNKLGFSVELLHDAHERITP----INAIHM-AKALEPYQLFFLE----D------------PVAPENTEWL 283 (440)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEECTTCSCH----HHHHHH-HHHTGGGCCSEEE----C------------SSCGGGGGGH
T ss_pred HHHHHHHHHHHhcCCCCeEEEECCCCCCH----HHHHHH-HHHhhhcCCCEEE----C------------CCChhhHHHH
Confidence 6788899999987 57899988888863 344443 4556788998886 1 1122235556
Q ss_pred HHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcCeeEEchHHh
Q 017176 199 YALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAY 240 (376)
Q Consensus 199 ~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad~VmiGRa~l 240 (376)
+++.+.. ++||.+...+.+.+++.++++ ..+|.|++--+-.
T Consensus 284 ~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~ 325 (440)
T 3t6c_A 284 KMLRQQS-STPIAMGELFVNVNEWKPLIDNKLIDYIRCHISSI 325 (440)
T ss_dssp HHHHHHC-CSCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGG
T ss_pred HHHHhhc-CCCEEeCcccCCHHHHHHHHHcCCccceeechhhh
Confidence 6776664 899999999999999999998 5689988744433
No 197
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=97.62 E-value=0.00033 Score=68.11 Aligned_cols=120 Identities=8% Similarity=0.053 Sum_probs=87.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccHH
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~ 152 (376)
.+++++.+.++++.+.||+.+.++.+ | +...+++++||+.+ ++++.+...-+|+..
T Consensus 147 ~~~~~~~~~a~~~~~~G~~~iKik~~-~------------------~~d~~~v~avr~a~~~~~l~vDan~~~~~~---- 203 (375)
T 1r0m_A 147 ADEQATVDLVRRHVEQGYRRIKLKIK-P------------------GWDVQPVRATREAFPDIRLTVDANSAYTLA---- 203 (375)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEECB-T------------------TBSHHHHHHHHHHCTTSCEEEECTTCCCGG----
T ss_pred CCHHHHHHHHHHHHHhcccEEEEecC-h------------------HHHHHHHHHHHHHcCCCeEEEeCCCCCCHH----
Confidence 48999999999998999999999752 1 12235566666655 677888887778643
Q ss_pred HHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcC
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAH 231 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad 231 (376)
+ +++ .+.+++.|+++|. . .+++.+++..+++.+.. ++||.+.+.+.+++++.++++ ..+|
T Consensus 204 ~-~~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~~~d 264 (375)
T 1r0m_A 204 D-AGR-LRQLDEYDLTYIE----Q------------PLAWDDLVDHAELARRI-RTPLCLDESVASASDARKALALGAGG 264 (375)
T ss_dssp G-HHH-HHTTGGGCCSCEE----C------------CSCTTCSHHHHHHHHHC-SSCEEESTTCCSHHHHHHHHHHTSCS
T ss_pred H-HHH-HHHHHhCCCcEEE----C------------CCCcccHHHHHHHHHhC-CCCEEecCccCCHHHHHHHHHhCCCC
Confidence 3 333 3346778998876 1 11222366667777665 899999999999999999998 5699
Q ss_pred eeEE
Q 017176 232 HVMV 235 (376)
Q Consensus 232 ~Vmi 235 (376)
.|++
T Consensus 265 ~v~i 268 (375)
T 1r0m_A 265 VINL 268 (375)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9998
No 198
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=97.61 E-value=0.00074 Score=66.49 Aligned_cols=137 Identities=9% Similarity=0.063 Sum_probs=96.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCc--cc------cccC---CHHHHHHHHHHHhccc--CccEEEE
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCF--GV------SLML---DPKFVGEAMSVIAANT--NVPVSVK 140 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~y--G~------~l~~---~~~~~~eiv~~v~~~~--~~pv~vK 140 (376)
.+++++++.++.+.+.||..+-+..+.+..... ..| |. .... ..++..+++++||+.+ ++++.|.
T Consensus 142 ~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~--~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vD 219 (409)
T 3go2_A 142 TDLDGVKRTAEEARERQFRAIKTNIFIHDDGPL--HAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLD 219 (409)
T ss_dssp CSHHHHHHHHHHHHHTTCCEEEECCEECSSSSC--EECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcccccccccc--cccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 368999999998888999999998733221100 001 11 0111 2467788999999986 5788888
Q ss_pred ecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHH
Q 017176 141 CRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVD 220 (376)
Q Consensus 141 iR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~ 220 (376)
..-+|+ .++.+++ .+.+++.|+++|.... .+++..+++++.. ++||++.+.+.+++
T Consensus 220 aN~~~~----~~~A~~~-~~~L~~~~i~~iE~P~------------------~d~~~~~~l~~~~-~iPIa~dE~~~~~~ 275 (409)
T 3go2_A 220 LNFNAK----PEGYLKI-LRELADFDLFWVEIDS------------------YSPQGLAYVRNHS-PHPISSCETLFGIR 275 (409)
T ss_dssp CTTCSC----HHHHHHH-HHHTTTSCCSEEECCC------------------SCHHHHHHHHHTC-SSCEEECTTCCHHH
T ss_pred CCCCCC----HHHHHHH-HHHHhhcCCeEEEeCc------------------CCHHHHHHHHhhC-CCCEEeCCCcCCHH
Confidence 777775 3344544 4566789999988321 1266677777664 89999999999999
Q ss_pred HHHHHHH-cCcCeeEEc
Q 017176 221 EVNAALR-KGAHHVMVG 236 (376)
Q Consensus 221 da~~~l~-~Gad~VmiG 236 (376)
++.++++ ..+|.|++=
T Consensus 276 ~~~~~i~~~~~d~v~~k 292 (409)
T 3go2_A 276 EFKPFFDANAVDVAIVD 292 (409)
T ss_dssp HHHHHHHTTCCSEEEEC
T ss_pred HHHHHHHhCCCCEEEeC
Confidence 9999998 568999873
No 199
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.61 E-value=0.00061 Score=61.82 Aligned_cols=153 Identities=13% Similarity=0.156 Sum_probs=94.2
Q ss_pred EEEEecCCCHHHHHHHHHHHHHCCCCE--EEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCC
Q 017176 67 IVLQIGGSNLDNLAKATELANAYNYDE--INLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIG 144 (376)
Q Consensus 67 ~~vQL~g~~~~~~~~aa~~~~~~G~d~--IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g 144 (376)
+..+|...|...+.++.+.+ +.|+|. +|+--|.-+++. .|| ..+++++|+.++.|+.+-+-.
T Consensus 3 i~pSila~D~~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~----t~G----------~~~v~~lr~~~~~~~dvhLmv- 66 (231)
T 3ctl_A 3 ISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNL----TLS----------PFFVSQVKKLATKPLDCHLMV- 66 (231)
T ss_dssp EEEBGGGSCGGGHHHHHHHH-HTTCSCEEEEEECSSSSSCC----CBC----------HHHHHHHHTTCCSCEEEEEES-
T ss_pred EEeehhhCChhhHHHHHHHH-HcCCCEEEEEEEeCccCccc----hhc----------HHHHHHHHhccCCcEEEEEEe-
Confidence 55677778888889999999 889997 566556533321 245 257888888777787776654
Q ss_pred CCCCccHHHHHHHHHHHhhcCCccEEEEccCc-cc----------cCCC------CCC----------------------
Q 017176 145 VDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK-AL----------LNGI------SPA---------------------- 185 (376)
Q Consensus 145 ~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~-~~----------~~g~------~~~---------------------- 185 (376)
.+.+.+.+ .+.++|+|.|++|.-. .. ..|. .+.
T Consensus 67 -~dp~~~i~-------~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l~~~D~VlvmsV~ 138 (231)
T 3ctl_A 67 -TRPQDYIA-------QLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITVMTVD 138 (231)
T ss_dssp -SCGGGTHH-------HHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSC
T ss_pred -cCHHHHHH-------HHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHHhcCCEEEEeeec
Confidence 22222211 1235788888887543 10 0000 000
Q ss_pred ---CCCCCCcccHHHHHHHHhhC----CCCeEEEecCCCCHHHHHHHHHcCcCeeEEc-hHHhhCCc
Q 017176 186 ---ENRTIPPLKYEYYYALLRDF----PDLTFTLNGGINTVDEVNAALRKGAHHVMVG-RAAYQNPW 244 (376)
Q Consensus 186 ---~~~~~~~~~~~~v~~~~~~~----~~ipVi~nGgI~s~~da~~~l~~Gad~VmiG-Ra~l~~P~ 244 (376)
.+....+..++.++++++.. .+++|.+.|||+ .+.+.++.+.|||.+.+| ++++..+.
T Consensus 139 pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~aGAd~~V~G~saif~~~d 204 (231)
T 3ctl_A 139 PGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMAAGADVFIVGTSGLFNHAE 204 (231)
T ss_dssp TTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHHHTCCEEEECTTTTGGGCS
T ss_pred cCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHHcCCCEEEEccHHHhCCCC
Confidence 00011111234444443321 268999999996 788889999999999999 99887554
No 200
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=97.60 E-value=0.00086 Score=60.85 Aligned_cols=136 Identities=12% Similarity=0.051 Sum_probs=82.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc---CccEEEEecCCCCCCccH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT---NVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~---~~pv~vKiR~g~~~~~~~ 151 (376)
..+.-..-++.+.+.|+|.||+.. + +|+-.. .+.+-+.++++.+ +.|+ |+-+-.... +.
T Consensus 86 ~~~~k~~e~~~Av~~GAdEID~vi-----n------ig~~~~----~v~~ei~~v~~a~~~~g~~l--KvIlEt~~L-~~ 147 (234)
T 1n7k_A 86 PLEVKLVEAQTVLEAGATELDVVP-----H------LSLGPE----AVYREVSGIVKLAKSYGAVV--KVILEAPLW-DD 147 (234)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECC-----C------GGGCHH----HHHHHHHHHHHHHHHTTCEE--EEECCGGGS-CH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEec-----c------chHHHH----HHHHHHHHHHHHHhhcCCeE--EEEEeccCC-CH
Confidence 344455556677778999999964 1 243222 4555555555544 3454 544422111 22
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHH--HHhhCCCCeEEEecCCCCHHHHHHHHHcC
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYA--LLRDFPDLTFTLNGGINTVDEVNAALRKG 229 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~--~~~~~~~ipVi~nGgI~s~~da~~~l~~G 229 (376)
++ +....++..++|+|+|-.+.+.....| + ..+.+.. .++.. .+||-++|||++.+++.++++.|
T Consensus 148 e~-i~~a~ria~eaGADfVKTsTG~~~~~g---A--------t~~dv~l~~m~~~v-~v~VKaaGGirt~~~al~~i~aG 214 (234)
T 1n7k_A 148 KT-LSLLVDSSRRAGADIVKTSTGVYTKGG---D--------PVTVFRLASLAKPL-GMGVKASGGIRSGIDAVLAVGAG 214 (234)
T ss_dssp HH-HHHHHHHHHHTTCSEEESCCSSSCCCC---S--------HHHHHHHHHHHGGG-TCEEEEESSCCSHHHHHHHHHTT
T ss_pred HH-HHHHHHHHHHhCCCEEEeCCCCCCCCC---C--------CHHHHHHHHHHHHH-CCCEEEecCCCCHHHHHHHHHcC
Confidence 33 334566777899999986643210011 1 1333333 44433 39999999999999999999999
Q ss_pred cC--eeEEchHHhh
Q 017176 230 AH--HVMVGRAAYQ 241 (376)
Q Consensus 230 ad--~VmiGRa~l~ 241 (376)
|+ |+..|+.++.
T Consensus 215 a~RiG~S~g~~I~~ 228 (234)
T 1n7k_A 215 ADIIGTSSAVKVLE 228 (234)
T ss_dssp CSEEEETTHHHHHH
T ss_pred ccccchHHHHHHHH
Confidence 99 7777777654
No 201
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=97.59 E-value=0.003 Score=61.65 Aligned_cols=139 Identities=14% Similarity=0.133 Sum_probs=103.0
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEE
Q 017176 63 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVK 140 (376)
Q Consensus 63 ~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vK 140 (376)
+.-|+-..+...+++++++.++.+.+.||..+-+..||+.. + .+++.-.+.+++||+.+ ++++.|.
T Consensus 133 ~~v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~--------~----~~~~~d~~~v~avR~a~G~~~~L~vD 200 (386)
T 3fv9_G 133 GPVPVISSIGGDTPEAMRAKVARHRAQGFKGHSIKIGASEA--------E----GGPALDAERITACLADRQPGEWYLAD 200 (386)
T ss_dssp SCBCEEEEECSCCHHHHHHHHHHHHHTTCCEEEEECCCCTT--------T----THHHHHHHHHHHHTTTCCTTCEEEEE
T ss_pred CceeeeEecCCCCHHHHHHHHHHHHHCCCCEEEEeccCCCC--------C----CCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 34567777778899999999998888999999999998632 1 24677788999999987 5688888
Q ss_pred ecCCCCCCccHHHHHHHHHHHh-hcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCH
Q 017176 141 CRIGVDDHDSYNQLCDFIYKVS-SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV 219 (376)
Q Consensus 141 iR~g~~~~~~~~~~~~~i~~~~-e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~ 219 (376)
..-+|+. ++.+++ .+.+ ++.++ +|. . .++ +++..+++.+.. ++||.+...+.+.
T Consensus 201 aN~~~~~----~~A~~~-~~~l~~~~~i-~iE----e------------P~~--~~~~~~~l~~~~-~iPIa~dE~~~~~ 255 (386)
T 3fv9_G 201 ANNGLTV----EHALRM-LSLLPPGLDI-VLE----A------------PCA--SWAETKSLRARC-ALPLLLDELIQTE 255 (386)
T ss_dssp CTTCCCH----HHHHHH-HHHSCSSCCC-EEE----C------------CCS--SHHHHHHHHTTC-CSCEEESTTCCSH
T ss_pred CCCCCCH----HHHHHH-HHHhhccCCc-EEe----c------------CCC--CHHHHHHHHhhC-CCCEEeCCCcCCH
Confidence 8877763 344443 3445 55666 553 0 111 366677777654 8999999999999
Q ss_pred HHHHHHHH-cCcCeeEEchH
Q 017176 220 DEVNAALR-KGAHHVMVGRA 238 (376)
Q Consensus 220 ~da~~~l~-~Gad~VmiGRa 238 (376)
+++.++++ ..+|.|++--+
T Consensus 256 ~~~~~~~~~~a~d~v~~k~~ 275 (386)
T 3fv9_G 256 TDLIAAIRDDLCDGVGLKVS 275 (386)
T ss_dssp HHHHHHHHTTCCSEEEEEHH
T ss_pred HHHHHHHHhCCCCEEEECcc
Confidence 99999998 56999988433
No 202
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=97.58 E-value=0.0019 Score=62.95 Aligned_cols=133 Identities=16% Similarity=0.124 Sum_probs=95.2
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCC
Q 017176 66 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIG 144 (376)
Q Consensus 66 p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g 144 (376)
|+...+...+++.+.+.++.+.+.||..+-+..|+. +++.-.+.+++||+.+ +.++.+...-+
T Consensus 139 ~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~----------------~~~~d~~~v~avR~a~~~~~l~vDan~~ 202 (385)
T 3i6e_A 139 PLSCSIANPDFDADIALMERLRADGVGLIKLKTGFR----------------DHAFDIMRLELIARDFPEFRVRVDYNQG 202 (385)
T ss_dssp EBEEEECCSSHHHHHHHHHHHHHHTCCEEEEECSSS----------------CHHHHHHHHHHHHHHCTTSEEEEECTTC
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEecCCC----------------CHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 444555556788887777776667999999876531 3455567788888776 67899998888
Q ss_pred CCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHH
Q 017176 145 VDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNA 224 (376)
Q Consensus 145 ~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~ 224 (376)
|+. .+. +++ .+.+++.|+++|. . .+++.+++.++++.+.. ++||.+...+.+.+++.+
T Consensus 203 ~~~-~~A---~~~-~~~L~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~ 260 (385)
T 3i6e_A 203 LEI-DEA---VPR-VLDVAQFQPDFIE----Q------------PVRAHHFELMARLRGLT-DVPLLADESVYGPEDMVR 260 (385)
T ss_dssp CCG-GGH---HHH-HHHHHTTCCSCEE----C------------CSCTTCHHHHHHHHTTC-SSCEEESTTCCSHHHHHH
T ss_pred CCH-HHH---HHH-HHHHHhcCCCEEE----C------------CCCcccHHHHHHHHHhC-CCCEEEeCCcCCHHHHHH
Confidence 875 322 232 3445678988875 1 11223477777777664 899999999999999999
Q ss_pred HHH-cCcCeeEEc
Q 017176 225 ALR-KGAHHVMVG 236 (376)
Q Consensus 225 ~l~-~Gad~VmiG 236 (376)
+++ ..+|.|++-
T Consensus 261 ~~~~~~~d~v~~k 273 (385)
T 3i6e_A 261 AAHEGICDGVSIK 273 (385)
T ss_dssp HHHHTCCSEEEEC
T ss_pred HHHcCCCCEEEec
Confidence 998 669999873
No 203
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=97.58 E-value=0.00053 Score=67.91 Aligned_cols=148 Identities=10% Similarity=0.105 Sum_probs=96.9
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCcccc---CCCCccc----------------cccCCHHHHHHH
Q 017176 65 HPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVA---GHGCFGV----------------SLMLDPKFVGEA 125 (376)
Q Consensus 65 ~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~---r~g~yG~----------------~l~~~~~~~~ei 125 (376)
.|+-....+.+++++.+.++...+.||+.+-+..|.|..... ..+ .+- ......++..++
T Consensus 139 v~~y~~~~~~~~~~~~~~~~~~~~~Gf~~iKikvG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 217 (426)
T 4e4f_A 139 VMVYCHTTGHSIDEVLDDYAKHRDQGFKAIRVQCGVPGMETTYGMAKG-KGLAYEPATKGSLPEEQLWSTEKYLDFTPKL 217 (426)
T ss_dssp EEEEEEECCSSHHHHHHHHHHHHHTTCSEEEECC--------------------CCSEESSSCCEEEECHHHHHHHHHHH
T ss_pred eeEeEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCCccccccccccc-cccccccccccccccccccchhHHHHHHHHH
Confidence 345455667788888888877778899999999987642100 000 000 001123567789
Q ss_pred HHHHhccc--CccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHh
Q 017176 126 MSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLR 203 (376)
Q Consensus 126 v~~v~~~~--~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~ 203 (376)
+++||+.+ ++++.+...-+|+ .++.+++ ++.+++.|+++|.- + +++.+++.++++++
T Consensus 218 v~avR~a~G~d~~L~vDaN~~~~----~~~A~~~-~~~L~~~~i~~iEe----P------------~~~~d~~~~~~l~~ 276 (426)
T 4e4f_A 218 FEAVRDKFGFNEHLLHDMHHRLT----PIEAARF-GKSVEDYRLFWMED----P------------TPAENQACFRLIRQ 276 (426)
T ss_dssp HHHHHHHHTTSSEEEEECTTCSC----HHHHHHH-HHHTGGGCCSEEEC----C------------SCCSSGGGGHHHHT
T ss_pred HHHHHHHhCCCCEEEEECCCCCC----HHHHHHH-HHHHhhcCCCEEEC----C------------CChHHHHHHHHHHh
Confidence 99999987 5788888877775 3344443 45677899998861 1 11222444566666
Q ss_pred hCCCCeEEEecCCCCHHHHHHHHH-cCcCeeEE
Q 017176 204 DFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 235 (376)
Q Consensus 204 ~~~~ipVi~nGgI~s~~da~~~l~-~Gad~Vmi 235 (376)
. .++||++.+.+.+++++.++++ ..+|.|++
T Consensus 277 ~-~~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~ 308 (426)
T 4e4f_A 277 H-TVTPIAVGEVFNSIWDCKQLIEEQLIDYIRT 308 (426)
T ss_dssp T-CCSCEEECTTCCSGGGTHHHHHTTCCSEECC
T ss_pred c-CCCCEEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 5 4899999999999999999998 56899886
No 204
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=97.57 E-value=0.0062 Score=54.95 Aligned_cols=51 Identities=16% Similarity=0.345 Sum_probs=42.4
Q ss_pred ccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCc
Q 017176 193 LKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 193 ~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~ 244 (376)
..++-++++++...+++|.+.|||. .+.+.++.+.|||.+.+||+++..+.
T Consensus 159 ~~l~ki~~lr~~~~~~~I~VdGGI~-~~ti~~~~~aGAd~~V~GsaIf~~~d 209 (227)
T 1tqx_A 159 DMMGKVSFLRKKYKNLNIQVDGGLN-IETTEISASHGANIIVAGTSIFNAED 209 (227)
T ss_dssp GGHHHHHHHHHHCTTCEEEEESSCC-HHHHHHHHHHTCCEEEESHHHHTCSS
T ss_pred HHHHHHHHHHHhccCCeEEEECCCC-HHHHHHHHHcCCCEEEEeHHHhCCCC
Confidence 3466677776655578999999995 88999999999999999999997665
No 205
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=97.56 E-value=0.0005 Score=66.62 Aligned_cols=120 Identities=10% Similarity=0.084 Sum_probs=87.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccHH
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~ 152 (376)
.+++++.+.|+.+.+.||+.+.++.+ | +...+.+++||+.+ ++++.+...-+|+..
T Consensus 140 ~~~~~~~~~a~~~~~~G~~~iKik~~-~------------------~~d~~~v~avr~a~~~~~l~vDan~~~~~~---- 196 (369)
T 2zc8_A 140 PSVEDTLRVVERHLEEGYRRIKLKIK-P------------------GWDYEVLKAVREAFPEATLTADANSAYSLA---- 196 (369)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEECB-T------------------TBSHHHHHHHHHHCTTSCEEEECTTCCCGG----
T ss_pred CCHHHHHHHHHHHHHhhhheeeeecC-h------------------hHHHHHHHHHHHHcCCCeEEEecCCCCCHH----
Confidence 47999999999998999999999752 1 12235566666655 677888887778643
Q ss_pred HHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcC
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAH 231 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad 231 (376)
+ +++ .+.+++.|+++|. .+ +++.+++..+++.++. ++||.+.+.+.+++++.++++ ..+|
T Consensus 197 ~-~~~-~~~l~~~~i~~iE----qP------------~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~~~d 257 (369)
T 2zc8_A 197 N-LAQ-LKRLDELRLDYIE----QP------------LAYDDLLDHAKLQREL-STPICLDESLTGAEKARKAIELGAGR 257 (369)
T ss_dssp G-HHH-HHGGGGGCCSCEE----CC------------SCTTCSHHHHHHHHHC-SSCEEESTTCCSHHHHHHHHHHTCCS
T ss_pred H-HHH-HHHHHhCCCcEEE----CC------------CCcccHHHHHHHHhhC-CCCEEEcCccCCHHHHHHHHHhCCCC
Confidence 2 333 3456788998877 11 1222356667777665 899999999999999999998 5589
Q ss_pred eeEE
Q 017176 232 HVMV 235 (376)
Q Consensus 232 ~Vmi 235 (376)
.|++
T Consensus 258 ~v~i 261 (369)
T 2zc8_A 258 VFNV 261 (369)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9987
No 206
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=97.54 E-value=0.0016 Score=59.71 Aligned_cols=138 Identities=18% Similarity=0.163 Sum_probs=96.5
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEec
Q 017176 63 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 142 (376)
Q Consensus 63 ~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR 142 (376)
.+-|+.-+=|.-++-+. .+ +..+|+|+|=|++.+ .+.+.+.++++..++ .+..+.|-+.
T Consensus 100 v~lPvLrKDfi~~~~qi---~e-a~~~GAD~ilLi~a~----------------l~~~~l~~l~~~a~~-lGl~~lvEv~ 158 (251)
T 1i4n_A 100 TCRPILAKDFYIDTVQV---KL-ASSVGADAILIIARI----------------LTAEQIKEIYEAAEE-LGMDSLVEVH 158 (251)
T ss_dssp CCSCEEEECCCCSTHHH---HH-HHHTTCSEEEEEGGG----------------SCHHHHHHHHHHHHT-TTCEEEEEEC
T ss_pred CCCCEEEeeCCCCHHHH---HH-HHHcCCCEEEEeccc----------------CCHHHHHHHHHHHHH-cCCeEEEEeC
Confidence 35688888777665432 23 677999999998642 122567778877765 4666666332
Q ss_pred CCCCCCccHHHHHHHHHHHhhcC-CccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCC-CCeEEEecCCCCHH
Q 017176 143 IGVDDHDSYNQLCDFIYKVSSLS-PTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVD 220 (376)
Q Consensus 143 ~g~~~~~~~~~~~~~i~~~~e~~-Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi~nGgI~s~~ 220 (376)
+.+|+.. + .+. |++.|-++.|.- .++. .+++...++.+..+ ++++|+-|||.|++
T Consensus 159 -------~~eE~~~----A-~~l~g~~iIGinnr~l--~t~~---------~d~~~~~~l~~~ip~~~~vIaEsGI~t~e 215 (251)
T 1i4n_A 159 -------SREDLEK----V-FSVIRPKIIGINTRDL--DTFE---------IKKNVLWELLPLVPDDTVVVAESGIKDPR 215 (251)
T ss_dssp -------SHHHHHH----H-HTTCCCSEEEEECBCT--TTCC---------BCTTHHHHHGGGSCTTSEEEEESCCCCGG
T ss_pred -------CHHHHHH----H-HhcCCCCEEEEeCccc--ccCC---------CCHHHHHHHHHhCCCCCEEEEeCCCCCHH
Confidence 3445322 2 358 999999999863 2211 12444456666655 58999999999999
Q ss_pred HHHHHHHcCcCeeEEchHHhhCCch
Q 017176 221 EVNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 221 da~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
|+.++.+. +|+|.||.+++..++.
T Consensus 216 dv~~~~~~-a~avLVG~aimr~~d~ 239 (251)
T 1i4n_A 216 ELKDLRGK-VNAVLVGTSIMKAENP 239 (251)
T ss_dssp GHHHHTTT-CSEEEECHHHHHCSSH
T ss_pred HHHHHHHh-CCEEEEcHHHcCCcCH
Confidence 99999999 9999999999988875
No 207
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.54 E-value=0.002 Score=60.90 Aligned_cols=138 Identities=12% Similarity=0.056 Sum_probs=80.0
Q ss_pred HHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecC-C--CCCCccHHHHHHH
Q 017176 81 KATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI-G--VDDHDSYNQLCDF 157 (376)
Q Consensus 81 ~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~-g--~~~~~~~~~~~~~ 157 (376)
..++.+.+.|+|+|-+.+- .+.+. -. ....+.+.++.++.+ ..++|+.+=+-. | +.+..+..+.+..
T Consensus 112 ~~ve~a~~~GAdaV~vlv~------~~~d~-~~--~~~~~~i~~v~~~~~-~~G~p~lv~~~~~g~~v~~~~~~~~~v~~ 181 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVL------WRSDE-DA--QQRLNMVKEFNELCH-SNGLLSIIEPVVRPPRCGDKFDREQAIID 181 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEE------ECTTS-CH--HHHHHHHHHHHHHHH-TTTCEEEEEEEECCCSSCSCCCHHHHHHH
T ss_pred hhHHHHHHcCCCEEEEEEE------cCCCc-cH--HHHHHHHHHHHHHHH-HcCCcEEEEEECCCCccccCCChhHHHHH
Confidence 3455677889999985431 01110 00 112233444444433 347887766521 1 2221222133333
Q ss_pred HHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhh---CCCCe-EEEecCCCCHH----HHHHHHHcC
Q 017176 158 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD---FPDLT-FTLNGGINTVD----EVNAALRKG 229 (376)
Q Consensus 158 i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~---~~~ip-Vi~nGgI~s~~----da~~~l~~G 229 (376)
.++.+.+.|+|++-+|.... ++. .++.+.++++. ...+| |+..||+ +.+ .+..+++.|
T Consensus 182 aa~~a~~lGaD~iKv~~~~~---~~g----------~~~~~~~vv~~~~~~~~~P~Vv~aGG~-~~~~~~~~~~~a~~aG 247 (304)
T 1to3_A 182 AAKELGDSGADLYKVEMPLY---GKG----------ARSDLLTASQRLNGHINMPWVILSSGV-DEKLFPRAVRVAMEAG 247 (304)
T ss_dssp HHHHHTTSSCSEEEECCGGG---GCS----------CHHHHHHHHHHHHHTCCSCEEECCTTS-CTTTHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEeCCCcC---CCC----------CHHHHHHHHHhccccCCCCeEEEecCC-CHHHHHHHHHHHHHcC
Confidence 34566779999999987421 111 14545555544 23799 9999999 553 466777789
Q ss_pred cCeeEEchHHhhC
Q 017176 230 AHHVMVGRAAYQN 242 (376)
Q Consensus 230 ad~VmiGRa~l~~ 242 (376)
+++|.+||++...
T Consensus 248 a~Gv~vGRaI~q~ 260 (304)
T 1to3_A 248 ASGFLAGRAVWSS 260 (304)
T ss_dssp CCEEEESHHHHGG
T ss_pred CeEEEEehHHhCc
Confidence 9999999999987
No 208
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=97.53 E-value=0.00015 Score=64.40 Aligned_cols=73 Identities=16% Similarity=0.111 Sum_probs=55.2
Q ss_pred cCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCC
Q 017176 164 LSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 243 (376)
Q Consensus 164 ~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P 243 (376)
+.|+|+|.+++......+ .. ..+..++.+.++++.. ++||++.|||. ++++.++++.|+|+|.+|++++..|
T Consensus 126 ~~g~d~i~~~~~~~~~~~----~~--~~~~~~~~l~~l~~~~-~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~~ 197 (215)
T 1xi3_A 126 KKGADYLGAGSVFPTKTK----ED--ARVIGLEGLRKIVESV-KIPVVAIGGIN-KDNAREVLKTGVDGIAVISAVMGAE 197 (215)
T ss_dssp HHTCSEEEEECSSCC--------C--CCCCHHHHHHHHHHHC-SSCEEEESSCC-TTTHHHHHTTTCSEEEESHHHHTSS
T ss_pred hcCCCEEEEcCCccCCCC----CC--CCCcCHHHHHHHHHhC-CCCEEEECCcC-HHHHHHHHHcCCCEEEEhHHHhCCC
Confidence 579999998763211000 00 1234578888887765 89999999998 9999999889999999999999877
Q ss_pred c
Q 017176 244 W 244 (376)
Q Consensus 244 ~ 244 (376)
+
T Consensus 198 d 198 (215)
T 1xi3_A 198 D 198 (215)
T ss_dssp S
T ss_pred C
Confidence 5
No 209
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=97.52 E-value=0.0014 Score=64.06 Aligned_cols=123 Identities=9% Similarity=-0.041 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHCCCCEEEec-CCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHHHH
Q 017176 78 NLAKATELANAYNYDEINLN-CGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQL 154 (376)
Q Consensus 78 ~~~~aa~~~~~~G~d~IeiN-~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~~~ 154 (376)
.+++.++.+.+.||..+-++ .|.+ + .+++.-.+++++||+.+ ++++.+...-+|.+ .++.
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~k~g~~----------~----~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~---~~~A 217 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVCIIPND----------K----VSDKEIVAYLRELREVIGWDMDMMVDCLYRWTD---WQKA 217 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCT----------T----SCHHHHHHHHHHHHHHHCSSSEEEEECTTCCSC---HHHH
T ss_pred HHHHHHHHHHHcCCCEEEecccCCC----------c----cCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCC---HHHH
Confidence 56667777888999999884 2210 0 35777888999999886 57888888877732 3344
Q ss_pred HHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcCee
Q 017176 155 CDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHV 233 (376)
Q Consensus 155 ~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad~V 233 (376)
+++ .+.+++.|+++|. . .+++.+++..+++++.. ++||++.+.+.+++++.++++ ..+|.|
T Consensus 218 ~~~-~~~L~~~~i~~iE----e------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~~~d~v 279 (394)
T 3mqt_A 218 RWT-FRQLEDIDLYFIE----A------------CLQHDDLIGHQKLAAAI-NTRLCGAEMSTTRFEAQEWLEKTGISVV 279 (394)
T ss_dssp HHH-HHHTGGGCCSEEE----S------------CSCTTCHHHHHHHHHHS-SSEEEECTTCCHHHHHHHHHHHHCCSEE
T ss_pred HHH-HHHHhhcCCeEEE----C------------CCCcccHHHHHHHHhhC-CCCEEeCCCcCCHHHHHHHHHcCCCCeE
Confidence 443 4566789999885 1 11223467777877765 899999999999999999998 679998
Q ss_pred EE
Q 017176 234 MV 235 (376)
Q Consensus 234 mi 235 (376)
++
T Consensus 280 ~~ 281 (394)
T 3mqt_A 280 QS 281 (394)
T ss_dssp CC
T ss_pred ec
Confidence 87
No 210
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=97.50 E-value=0.0029 Score=61.55 Aligned_cols=133 Identities=8% Similarity=0.078 Sum_probs=97.7
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecC
Q 017176 66 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRI 143 (376)
Q Consensus 66 p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~ 143 (376)
|+-..+...+++.+++.++...+.||..+-+..|. +++.-.+.+++||+.+ +.++.+...-
T Consensus 133 ~~y~t~g~~~~e~~~~~a~~~~~~Gf~~~KlK~g~-----------------~~~~d~~~v~avR~a~g~~~~L~vDaN~ 195 (379)
T 3r0u_A 133 VTDVSISCGNVAETIQNIQNGVEANFTAIKVKTGA-----------------DFNRDIQLLKALDNEFSKNIKFRFDANQ 195 (379)
T ss_dssp EBCEEECCCCHHHHHHHHHHHHHTTCCEEEEECSS-----------------CHHHHHHHHHHHHHHCCTTSEEEEECTT
T ss_pred EEEEEecCCCHHHHHHHHHHHHHcCCCEEeeecCC-----------------CHHHHHHHHHHHHHhcCCCCeEEEeCCC
Confidence 34445556789999988888888899999887542 3566778899999987 4688888887
Q ss_pred CCCCCccHHHHHHHHHHHhhc--CCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHH
Q 017176 144 GVDDHDSYNQLCDFIYKVSSL--SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE 221 (376)
Q Consensus 144 g~~~~~~~~~~~~~i~~~~e~--~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~d 221 (376)
+|+. ++.+++ .+.+++ .|+.+|. . .+++.+++..+++.+.. ++||.++..+.+..+
T Consensus 196 ~w~~----~~A~~~-~~~l~~~~~~l~~iE----e------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~ 253 (379)
T 3r0u_A 196 GWNL----AQTKQF-IEEINKYSLNVEIIE----Q------------PVKYYDIKAMAEITKFS-NIPVVADESVFDAKD 253 (379)
T ss_dssp CCCH----HHHHHH-HHHHHTSCCCEEEEE----C------------CSCTTCHHHHHHHHHHC-SSCEEESTTCSSHHH
T ss_pred CcCH----HHHHHH-HHHHhhcCCCcEEEE----C------------CCCcccHHHHHHHHhcC-CCCEEeCCccCCHHH
Confidence 7753 344443 445667 6777765 1 11223467777887765 899999999999999
Q ss_pred HHHHHH-cCcCeeEEch
Q 017176 222 VNAALR-KGAHHVMVGR 237 (376)
Q Consensus 222 a~~~l~-~Gad~VmiGR 237 (376)
+.++++ ..+|.|++--
T Consensus 254 ~~~~i~~~a~d~v~~k~ 270 (379)
T 3r0u_A 254 AERVIDEQACNMINIKL 270 (379)
T ss_dssp HHHHHHTTCCSEEEECH
T ss_pred HHHHHHcCCCCEEEECc
Confidence 999999 5589998843
No 211
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.50 E-value=0.00013 Score=66.90 Aligned_cols=79 Identities=18% Similarity=0.311 Sum_probs=61.7
Q ss_pred HHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchH
Q 017176 159 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 238 (376)
Q Consensus 159 ~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa 238 (376)
++.+.+.|+|.+++--=++...|. +.+++.+.++.++. .+|+..-|||+|.++++++++.|||-|.+|+.
T Consensus 37 a~~~~~~gad~lhvvDld~a~~~~---------~~~~~~i~~i~~~~-~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~ 106 (243)
T 4gj1_A 37 FKEYEKAGAKELHLVDLTGAKDPS---------KRQFALIEKLAKEV-SVNLQVGGGIRSKEEVKALLDCGVKRVVIGSM 106 (243)
T ss_dssp HHHHHHHTCCEEEEEEHHHHHCGG---------GCCHHHHHHHHHHC-CSEEEEESSCCCHHHHHHHHHTTCSEEEECTT
T ss_pred HHHHHHCCCCEEEEEecCcccccc---------hhHHHHHHHHHHhc-CCCeEeccccccHHHHHHHHHcCCCEEEEccc
Confidence 345667899999875322111111 12367888888875 89999999999999999999999999999999
Q ss_pred HhhCCchhh
Q 017176 239 AYQNPWYTL 247 (376)
Q Consensus 239 ~l~~P~lf~ 247 (376)
++.||.++.
T Consensus 107 a~~~p~li~ 115 (243)
T 4gj1_A 107 AIKDATLCL 115 (243)
T ss_dssp TTTCHHHHH
T ss_pred cccCCchHH
Confidence 999999853
No 212
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=97.50 E-value=0.00022 Score=65.41 Aligned_cols=168 Identities=15% Similarity=0.112 Sum_probs=91.4
Q ss_pred CEEEEecC--CCHHHHHHHHHHHHHCCCCEEEecCC--CCCcc---ccCCCCcccccc--CCHHHHHHHHHHHhcccCcc
Q 017176 66 PIVLQIGG--SNLDNLAKATELANAYNYDEINLNCG--CPSPK---VAGHGCFGVSLM--LDPKFVGEAMSVIAANTNVP 136 (376)
Q Consensus 66 p~~vQL~g--~~~~~~~~aa~~~~~~G~d~IeiN~g--cP~~~---v~r~g~yG~~l~--~~~~~~~eiv~~v~~~~~~p 136 (376)
-++.=+.. .+.+...+.++.+.++|+|.|||.+= -|... +.+.. --+|. -+.+.+.++++++|+. +|
T Consensus 15 ali~yitaG~P~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~--~rAL~~g~~~~~~~~~~~~~r~~--~P 90 (252)
T 3tha_A 15 ANVAYTVLGYPNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAA--KIALDQGVDIHSVFELLARIKTK--KA 90 (252)
T ss_dssp EEEEEEETTSSCHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHH--HHHHHTTCCHHHHHHHHHHCCCS--SE
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHH--HHHHHCCCCHHHHHHHHHHHhcC--CC
Confidence 34544433 46688999999999999999999652 22210 00000 00111 2567888899988865 67
Q ss_pred EEEEe------cCCCCCC----------------ccHHHHHHHHHHHhhcCCccEEEE-ccCcc---------cc-----
Q 017176 137 VSVKC------RIGVDDH----------------DSYNQLCDFIYKVSSLSPTRHFII-HSRKA---------LL----- 179 (376)
Q Consensus 137 v~vKi------R~g~~~~----------------~~~~~~~~~i~~~~e~~Gvd~I~v-h~r~~---------~~----- 179 (376)
+.+=. +.|.+.. -.++|.. .+...+++.|++.|.+ ...+. ..
T Consensus 91 ivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~-~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY 169 (252)
T 3tha_A 91 LVFMVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESD-DLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIY 169 (252)
T ss_dssp EEEECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCH-HHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEE
T ss_pred EEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHH-HHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEE
Confidence 65521 1111100 0011111 1122344556655543 11110 00
Q ss_pred ----CCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhh
Q 017176 180 ----NGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 241 (376)
Q Consensus 180 ----~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~ 241 (376)
.|..+... .......+.+.++++. .++||+..+||.+++++.++.+ +||+|.+|++++.
T Consensus 170 ~Vs~~GvTG~~~-~~~~~~~~~v~~vr~~-~~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGSAiVk 232 (252)
T 3tha_A 170 LLASIGITGTKS-VEEAILQDKVKEIRSF-TNLPIFVGFGIQNNQDVKRMRK-VADGVIVGTSIVK 232 (252)
T ss_dssp EECCSCSSSCSH-HHHHHHHHHHHHHHTT-CCSCEEEESSCCSHHHHHHHTT-TSSEEEECHHHHH
T ss_pred EEecCCCCCccc-CCCHHHHHHHHHHHHh-cCCcEEEEcCcCCHHHHHHHHh-cCCEEEECHHHHH
Confidence 12122110 0000012355555544 5899999999999999998876 6999999999874
No 213
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=97.48 E-value=0.00022 Score=65.21 Aligned_cols=75 Identities=16% Similarity=0.045 Sum_probs=54.9
Q ss_pred cCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhC
Q 017176 164 LSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 242 (376)
Q Consensus 164 ~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 242 (376)
+.|+|+|.+........ .. ..++..++.+.++.+.. .++||++-||| +++++.++++.|||+|.+|++++..
T Consensus 153 ~~GaDyI~vgpvf~T~t----K~--~~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~sai~~a 225 (243)
T 3o63_A 153 AGDADYFCVGPCWPTPT----KP--GRAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVVRAITSA 225 (243)
T ss_dssp HSSCSEEEECCSSCCCC-----------CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEESHHHHTC
T ss_pred hCCCCEEEEcCccCCCC----CC--CcchhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEeHHHhCC
Confidence 58999999975321110 00 01234578888877653 48999999999 9999999999999999999999987
Q ss_pred Cch
Q 017176 243 PWY 245 (376)
Q Consensus 243 P~l 245 (376)
++.
T Consensus 226 ~dp 228 (243)
T 3o63_A 226 DDP 228 (243)
T ss_dssp SSH
T ss_pred CCH
Confidence 664
No 214
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.48 E-value=0.0016 Score=57.82 Aligned_cols=125 Identities=16% Similarity=0.146 Sum_probs=75.6
Q ss_pred HHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccH-HHHHHH
Q 017176 79 LAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSY-NQLCDF 157 (376)
Q Consensus 79 ~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~-~~~~~~ 157 (376)
....++.+.++|+|.|.+|... | . +.++.+++.. -+++.......+..+. .+.++.
T Consensus 67 ~~~~v~~~~~~Gad~vtvh~~~-----------g------~----~~i~~~~~~~--gv~vl~~t~~~~~~~~~~~~v~~ 123 (208)
T 2czd_A 67 NRLIARKVFGAGADYVIVHTFV-----------G------R----DSVMAVKELG--EIIMVVEMSHPGALEFINPLTDR 123 (208)
T ss_dssp HHHHHHHHHHTTCSEEEEESTT-----------C------H----HHHHHHHTTS--EEEEECCCCSGGGGTTTGGGHHH
T ss_pred HHHHHHHHHhcCCCEEEEeccC-----------C------H----HHHHHHHHhC--CcEEEEecCCcchhhHHHHHHHH
Confidence 3445566668999999998521 2 1 1244555443 3444444332221111 233444
Q ss_pred HHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCC-HHHHHHHHHcCcCeeEEc
Q 017176 158 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINT-VDEVNAALRKGAHHVMVG 236 (376)
Q Consensus 158 i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s-~~da~~~l~~Gad~VmiG 236 (376)
++.+..+.|++.+.+.+.. .+.+.++++..+.-+++..|||.. ..++.++++.|+|.+.+|
T Consensus 124 ~~~~a~~~G~~G~~~~~~~------------------~~~i~~lr~~~~~~~~iv~gGI~~~g~~~~~~~~aGad~vvvG 185 (208)
T 2czd_A 124 FIEVANEIEPFGVIAPGTR------------------PERIGYIRDRLKEGIKILAPGIGAQGGKAKDAVKAGADYIIVG 185 (208)
T ss_dssp HHHHHHHHCCSEEECCCSS------------------THHHHHHHHHSCTTCEEEECCCCSSTTHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHhCCcEEEECCCC------------------hHHHHHHHHhCCCCeEEEECCCCCCCCCHHHHHHcCCCEEEEC
Confidence 5556667899887655321 233445555444345779999985 337888888999999999
Q ss_pred hHHhhCCc
Q 017176 237 RAAYQNPW 244 (376)
Q Consensus 237 Ra~l~~P~ 244 (376)
|+++..+.
T Consensus 186 r~I~~a~d 193 (208)
T 2czd_A 186 RAIYNAPN 193 (208)
T ss_dssp HHHHTSSS
T ss_pred hHHhcCCC
Confidence 99997654
No 215
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=97.45 E-value=0.00044 Score=67.65 Aligned_cols=128 Identities=7% Similarity=-0.101 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHHHH
Q 017176 77 DNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQL 154 (376)
Q Consensus 77 ~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~~~ 154 (376)
+.+.+.|+++.+.||+.+.++.|..... -.+ .++++...++++++|+.+ ++++.+...-+|+ .++.
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~~~-------~~~-~~~~~~~~e~v~avR~~~g~d~~l~vDan~~~~----~~~a 217 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGRH-------MPL-WEGTKRDIAIVRGISEVAGPAGKIMIDANNAYN----LNLT 217 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHHHT-------SCH-HHHHHHHHHHHHHHHHHHCTTCCEEEECTTCCC----HHHH
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCccc-------CCc-cccHHHHHHHHHHHHHHhCCCCeEEEECCCCCC----HHHH
Confidence 8999999999999999999986532110 001 236678889999999876 4677776655553 4555
Q ss_pred HHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC----CCCeEEEecCCCCHHHHHHHHH-cC
Q 017176 155 CDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF----PDLTFTLNGGINTVDEVNAALR-KG 229 (376)
Q Consensus 155 ~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~----~~ipVi~nGgI~s~~da~~~l~-~G 229 (376)
++++ +.+++.|+++|.- + ++ .+++..+++++.. .++||++.+ +.++++++++++ ..
T Consensus 218 i~~~-~~l~~~~i~~iE~----P------------~~-~d~~~~~~l~~~l~~~g~~iPIa~dE-~~~~~~~~~~i~~~~ 278 (392)
T 3p3b_A 218 KEVL-AALSDVNLYWLEE----A------------FH-EDEALYEDLKEWLGQRGQNVLIADGE-GLASPHLIEWATRGR 278 (392)
T ss_dssp HHHH-HHTTTSCEEEEEC----S------------SS-CCHHHHHHHHHHHHHHTCCCEEEECC-SSCCTTHHHHHHTTS
T ss_pred HHHH-HHHHhcCCCEEec----C------------Cc-ccHHHHHHHHHhhccCCCCccEEecC-CCCHHHHHHHHHcCC
Confidence 6654 4567888887651 1 11 2366667776651 389999999 999999999998 45
Q ss_pred cCeeEE
Q 017176 230 AHHVMV 235 (376)
Q Consensus 230 ad~Vmi 235 (376)
+|.|++
T Consensus 279 ~d~v~i 284 (392)
T 3p3b_A 279 VDVLQY 284 (392)
T ss_dssp CCEECC
T ss_pred CCEEEe
Confidence 898876
No 216
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=97.45 E-value=0.00029 Score=63.17 Aligned_cols=75 Identities=16% Similarity=0.039 Sum_probs=53.2
Q ss_pred cCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCC
Q 017176 164 LSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 243 (376)
Q Consensus 164 ~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P 243 (376)
+.|+|+|.+..-.. .+.. . ....+..++.+.++++...++||++.|||. ++++.++++.|+|+|.+|++++..+
T Consensus 134 ~~g~d~v~~~~v~~--t~~~-~--~~~~~~~~~~l~~~~~~~~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~~ 207 (227)
T 2tps_A 134 EDGADYVGLGPIYP--TETK-K--DTRAVQGVSLIEAVRRQGISIPIVGIGGIT-IDNAAPVIQAGADGVSMISAISQAE 207 (227)
T ss_dssp HHTCSEEEECCSSC--CCSS-S--SCCCCCTTHHHHHHHHTTCCCCEEEESSCC-TTTSHHHHHTTCSEEEESHHHHTSS
T ss_pred hCCCCEEEECCCcC--CCCC-C--CCCCccCHHHHHHHHHhCCCCCEEEEcCCC-HHHHHHHHHcCCCEEEEhHHhhcCC
Confidence 57999999732110 0000 0 011233478888887765239999999998 9999999999999999999998765
Q ss_pred c
Q 017176 244 W 244 (376)
Q Consensus 244 ~ 244 (376)
+
T Consensus 208 d 208 (227)
T 2tps_A 208 D 208 (227)
T ss_dssp C
T ss_pred C
Confidence 4
No 217
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=97.44 E-value=0.0013 Score=61.95 Aligned_cols=200 Identities=10% Similarity=0.060 Sum_probs=118.4
Q ss_pred CCChHHHHHHHHHhCCCcEEEeccee-ecccccccc---hhhhhhc----c-CCCCCCEEEEe-cC-CCHHHHHHHHHHH
Q 017176 18 DWTDNHYRTLARLISKHAWLYTEMLA-AETIIYQQG---NLDRFLA----F-SPEQHPIVLQI-GG-SNLDNLAKATELA 86 (376)
Q Consensus 18 ~~td~~~r~~~~~~Gg~gl~~te~v~-~~~~~~~~~---~~~~~~~----~-~~~~~p~~vQL-~g-~~~~~~~~aa~~~ 86 (376)
+.-|....+++.+.| +..+++.-.+ +..+.+.+. ....++. + ...+.|+++-+ +| .+++...+.++.+
T Consensus 35 ~ayD~~sA~l~e~aG-~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~d~Gyg~~~~v~~~v~~l 113 (305)
T 3ih1_A 35 GAHDAMAALVARNTG-FLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRATDLPVLVDIDTGFGGVLNVARTAVEM 113 (305)
T ss_dssp BCSSHHHHHHHHHTT-CSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHHCCCEEEECTTCSSSHHHHHHHHHHH
T ss_pred cCcCHHHHHHHHHcC-CCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 556778888877776 6666655322 112222111 0111110 0 11246777665 12 2588888999999
Q ss_pred HHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCC
Q 017176 87 NAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSP 166 (376)
Q Consensus 87 ~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~G 166 (376)
+++|+++|.|--+... |.+ |+.++.-+-..+...+-|++++++ +.++.|--|..-.....+++.++. ++.++++|
T Consensus 114 ~~aGaagv~iED~~~~-krc--Gh~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ai~R-a~ay~eAG 188 (305)
T 3ih1_A 114 VEAKVAAVQIEDQQLP-KKC--GHLNGKKLVTTEELVQKIKAIKEV-APSLYIVARTDARGVEGLDEAIER-ANAYVKAG 188 (305)
T ss_dssp HHTTCSEEEEECBCSS-CCT--TCTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEEECCHHHHCHHHHHHH-HHHHHHHT
T ss_pred HHhCCcEEEECCCCCC-ccc--CCCCCCcccCHHHHHHHHHHHHHc-CCCeEEEEeeccccccCHHHHHHH-HHHHHHcC
Confidence 9999999999876542 223 333333445566666667777666 556666555421101225566655 34567899
Q ss_pred ccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEe---cCCCCHHHHHHHHHcCcCeeEEchHHhh
Q 017176 167 TRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN---GGINTVDEVNAALRKGAHHVMVGRAAYQ 241 (376)
Q Consensus 167 vd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~n---GgI~s~~da~~~l~~Gad~VmiGRa~l~ 241 (376)
+|.|.+++... .+.+.++.+++ ++|+++| ||-...-+..++-+.|+..|.+|-.++.
T Consensus 189 AD~i~~e~~~~-----------------~~~~~~i~~~~-~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~r 248 (305)
T 3ih1_A 189 ADAIFPEALQS-----------------EEEFRLFNSKV-NAPLLANMTEFGKTPYYSAEEFANMGFQMVIYPVTSLR 248 (305)
T ss_dssp CSEEEETTCCS-----------------HHHHHHHHHHS-CSCBEEECCTTSSSCCCCHHHHHHTTCSEEEECSHHHH
T ss_pred CCEEEEcCCCC-----------------HHHHHHHHHHc-CCCEEEeecCCCCCCCCCHHHHHHcCCCEEEEchHHHH
Confidence 99999997421 45667777776 7999876 3321111244455579999999877654
No 218
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=97.43 E-value=0.0019 Score=63.13 Aligned_cols=123 Identities=11% Similarity=-0.052 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHCCCCEEEec-CCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHHHH
Q 017176 78 NLAKATELANAYNYDEINLN-CGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQL 154 (376)
Q Consensus 78 ~~~~aa~~~~~~G~d~IeiN-~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~~~ 154 (376)
.+++.++.+.+.||..+-++ .|.+ ..+++.-.+++++||+.+ ++++.+...-+|.+ .++.
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~--------------~~~~~~d~e~v~avR~a~G~d~~l~vDaN~~~~~---~~~A 222 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKA--------------DWSTKEVAYYLRELRGILGHDTDMMVDYLYRFTD---WYEV 222 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTC--------------CCCHHHHHHHHHHHHHHHCSSSEEEEECTTCCCC---HHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCC--------------ccCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCC---HHHH
Confidence 56667777788899999884 2211 035677888999999887 57888888777732 3344
Q ss_pred HHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcCee
Q 017176 155 CDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHV 233 (376)
Q Consensus 155 ~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad~V 233 (376)
+++ .+.+++.|+++|.- .+++.+++..+++++.. ++||++.+.+.+++++.++++ ..+|.|
T Consensus 223 ~~~-~~~L~~~~i~~iEe----------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~~~d~v 284 (394)
T 3mkc_A 223 ARL-LNSIEDLELYFAEA----------------TLQHDDLSGHAKLVENT-RSRICGAEMSTTRFEAEEWITKGKVHLL 284 (394)
T ss_dssp HHH-HHHTGGGCCSEEES----------------CSCTTCHHHHHHHHHHC-SSCBEECTTCCHHHHHHHHHHTTCCSEE
T ss_pred HHH-HHHhhhcCCeEEEC----------------CCCchhHHHHHHHHhhC-CCCEEeCCCCCCHHHHHHHHHcCCCCeE
Confidence 444 45667889998751 11222467777777765 899999999999999999998 568998
Q ss_pred EE
Q 017176 234 MV 235 (376)
Q Consensus 234 mi 235 (376)
++
T Consensus 285 ~~ 286 (394)
T 3mkc_A 285 QS 286 (394)
T ss_dssp CC
T ss_pred ec
Confidence 87
No 219
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=97.39 E-value=0.0024 Score=62.38 Aligned_cols=131 Identities=9% Similarity=0.063 Sum_probs=92.2
Q ss_pred CHHHHHHHH-HHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccH
Q 017176 75 NLDNLAKAT-ELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 75 ~~~~~~~aa-~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~ 151 (376)
++++.++.+ +...+.||..+-+..|++... .....++...+.+++||+.+ ++++.+...-+|+.
T Consensus 146 ~~~~~~~~~~~~~~~~Gf~~~K~KvG~~~~~---------d~~~~~~~~~~~v~avReavG~d~~l~vDaN~~~~~---- 212 (388)
T 3tcs_A 146 TPRDEAERLKRLRDTQGFTAFKVRAGAEVGR---------NRDEWPGRTEEIIPTMRRELGDDVDLLIDANSCYTP---- 212 (388)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECSCTTCT---------TCCSSTTHHHHHHHHHHHHHCSSSEEEEECTTCCCH----
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEccCCCccc---------ccccchhHHHHHHHHHHHHhCCCCeEEEeCCCCcCH----
Confidence 566555544 444577999999998876421 11123556778899999886 57888988888863
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCc
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGA 230 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Ga 230 (376)
++.+++ .+.+++.|+.+|. . .+++.+++.++++.+.. ++||.+...+.+..++.++++ ..+
T Consensus 213 ~~A~~~-~~~l~~~~i~~iE----e------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~ 274 (388)
T 3tcs_A 213 DRAIEV-GHMLQDHGFCHFE----E------------PCPYWELAQTKQVTDAL-DIDVTGGEQDCDLPTWQRMIDMRAV 274 (388)
T ss_dssp HHHHHH-HHHHHHTTCCEEE----C------------CSCTTCHHHHHHHHHHC-SSCEEECTTCCCHHHHHHHHHHTCC
T ss_pred HHHHHH-HHHHhhcCCeEEE----C------------CCCccCHHHHHHHHHhc-CCCEEcCCccCCHHHHHHHHHcCCC
Confidence 344443 3456778998874 1 12223477777887765 899999999999999999998 568
Q ss_pred CeeEEc
Q 017176 231 HHVMVG 236 (376)
Q Consensus 231 d~VmiG 236 (376)
|.|++-
T Consensus 275 d~v~~d 280 (388)
T 3tcs_A 275 DIVQPD 280 (388)
T ss_dssp SEECCC
T ss_pred CEEEeC
Confidence 988763
No 220
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.35 E-value=0.0018 Score=58.01 Aligned_cols=152 Identities=16% Similarity=0.150 Sum_probs=89.2
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCcc-----ccC-----CCCccccccCCHHHHHHHHHHHhc--
Q 017176 64 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPK-----VAG-----HGCFGVSLMLDPKFVGEAMSVIAA-- 131 (376)
Q Consensus 64 ~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~-----v~r-----~g~yG~~l~~~~~~~~eiv~~v~~-- 131 (376)
..|++.=|-+.+++++.+.++.+.+.|++.|++..-.|... ..+ .-.+|. + -+.+.+...+++=.+
T Consensus 15 ~~~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~vgagt-v-i~~d~~~~A~~aGAd~v 92 (214)
T 1wbh_A 15 TGPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGT-V-LNPQQLAEVTEAGAQFA 92 (214)
T ss_dssp SCSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEES-C-CSHHHHHHHHHHTCSCE
T ss_pred HCCEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCcCCEEeeCE-E-EEHHHHHHHHHcCCCEE
Confidence 56788888888999999999999999999999975433210 000 001122 1 122222222221000
Q ss_pred --------------ccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHH
Q 017176 132 --------------NTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 197 (376)
Q Consensus 132 --------------~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~ 197 (376)
..+.++.. |. .+..|..+ +.+.|+|+|.+++... ....++
T Consensus 93 ~~p~~d~~v~~~~~~~g~~~i~----G~---~t~~e~~~-----A~~~Gad~v~~Fpa~~--------------~gG~~~ 146 (214)
T 1wbh_A 93 ISPGLTEPLLKAATEGTIPLIP----GI---STVSELML-----GMDYGLKEFKFFPAEA--------------NGGVKA 146 (214)
T ss_dssp EESSCCHHHHHHHHHSSSCEEE----EE---SSHHHHHH-----HHHTTCCEEEETTTTT--------------TTHHHH
T ss_pred EcCCCCHHHHHHHHHhCCCEEE----ec---CCHHHHHH-----HHHCCCCEEEEecCcc--------------ccCHHH
Confidence 01112111 11 11222211 1246666666654110 011567
Q ss_pred HHHHHhhCCCCeEEEecCCCCHHHHHHHHHc-CcCeeEEchHHhhCCch
Q 017176 198 YYALLRDFPDLTFTLNGGINTVDEVNAALRK-GAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 198 v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~-Gad~VmiGRa~l~~P~l 245 (376)
+++++..++++||++.||| +++.+.+.++. |+++|. |+++...+.+
T Consensus 147 lk~i~~~~~~ipvvaiGGI-~~~n~~~~l~agg~~~v~-gS~i~~~~~~ 193 (214)
T 1wbh_A 147 LQAIAGPFSQVRFCPTGGI-SPANYRDYLALKSVLCIG-GSWLVPADAL 193 (214)
T ss_dssp HHHHHTTCTTCEEEEBSSC-CTTTHHHHHTSTTBSCEE-EGGGSCHHHH
T ss_pred HHHHhhhCCCCeEEEECCC-CHHHHHHHHhcCCCeEEE-eccccChhhh
Confidence 7888777779999999999 57899999996 999999 9988776664
No 221
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.34 E-value=0.00042 Score=62.85 Aligned_cols=153 Identities=11% Similarity=0.083 Sum_probs=96.3
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCcc-----c---cCCCCccccccCCHHHHHHHHHHHhcc----
Q 017176 65 HPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPK-----V---AGHGCFGVSLMLDPKFVGEAMSVIAAN---- 132 (376)
Q Consensus 65 ~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~-----v---~r~g~yG~~l~~~~~~~~eiv~~v~~~---- 132 (376)
.+++.=+.+.++++..+.++.+.+.|++.||+.+-.|... . ...-.-|+.-.-+.+.+...+++=.+.
T Consensus 34 ~~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP 113 (232)
T 4e38_A 34 LKVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVSP 113 (232)
T ss_dssp HCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEECS
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEeC
Confidence 4677778899999999999999999999999977655310 0 000011222223455555555441110
Q ss_pred ------------cCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHH
Q 017176 133 ------------TNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYA 200 (376)
Q Consensus 133 ------------~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~ 200 (376)
.++|+.. |. .+..|+.+ +.+.|+|+|-+...... . ..+++++
T Consensus 114 ~~~~~vi~~~~~~gi~~ip----Gv---~TptEi~~-----A~~~Gad~vK~FPa~~~-g-------------G~~~lka 167 (232)
T 4e38_A 114 GFNPNTVRACQEIGIDIVP----GV---NNPSTVEA-----ALEMGLTTLKFFPAEAS-G-------------GISMVKS 167 (232)
T ss_dssp SCCHHHHHHHHHHTCEEEC----EE---CSHHHHHH-----HHHTTCCEEEECSTTTT-T-------------HHHHHHH
T ss_pred CCCHHHHHHHHHcCCCEEc----CC---CCHHHHHH-----HHHcCCCEEEECcCccc-c-------------CHHHHHH
Confidence 1222211 11 12334322 23689999988654211 1 1577888
Q ss_pred HHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCch
Q 017176 201 LLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 201 ~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
++.-++++|++..||| +++.+.+.++.|+.++.+|..+. +|.+
T Consensus 168 l~~p~p~ip~~ptGGI-~~~n~~~~l~aGa~~~vgGs~l~-~~~~ 210 (232)
T 4e38_A 168 LVGPYGDIRLMPTGGI-TPSNIDNYLAIPQVLACGGTWMV-DKKL 210 (232)
T ss_dssp HHTTCTTCEEEEBSSC-CTTTHHHHHTSTTBCCEEECGGG-CHHH
T ss_pred HHHHhcCCCeeeEcCC-CHHHHHHHHHCCCeEEEECchhc-ChHH
Confidence 8877789999999999 58999999999999988877553 4443
No 222
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=97.29 E-value=0.0017 Score=63.77 Aligned_cols=123 Identities=10% Similarity=0.097 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHHH
Q 017176 76 LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQ 153 (376)
Q Consensus 76 ~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 153 (376)
++.+++.++.+.+.||+.+.++.+ | + .+ .+.+++||+.+ ++++.|...-+|+..+ + +
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv~-~-------~-------~d----~~~v~avR~a~G~~~~L~vDaN~~w~~~~-~-~ 222 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKIK-P-------G-------WD----VEPLQETRRAVGDHFPLWTDANSSFELDQ-W-E 222 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEECB-T-------T-------BS----HHHHHHHHHHHCTTSCEEEECTTCCCGGG-H-H
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeC-c-------c-------hH----HHHHHHHHHhcCCCCEEEEeCCCCCCHHH-H-H
Confidence 899999998888889999999863 1 0 12 45677777765 5789999888887533 2 3
Q ss_pred HHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcCe
Q 017176 154 LCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHH 232 (376)
Q Consensus 154 ~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad~ 232 (376)
+ .+.+++.|+++|. . .+++.+++..+++.+.. ++||.+...+.+.+++.++++ ..+|.
T Consensus 223 ~----~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~~~~~~~d~ 281 (400)
T 3mwc_A 223 T----FKAMDAAKCLFHE----Q------------PLHYEALLDLKELGERI-ETPICLDESLISSRVAEFVAKLGISNI 281 (400)
T ss_dssp H----HHHHGGGCCSCEE----S------------CSCTTCHHHHHHHHHHS-SSCEEESTTCCSHHHHHHHHHTTCCSE
T ss_pred H----HHHHHhcCCCEEe----C------------CCChhhHHHHHHHHhhC-CCCEEEeCCcCCHHHHHHHHhcCCCCE
Confidence 2 3456778988875 1 12233477777877765 899999999999999999998 56899
Q ss_pred eEEchHHh
Q 017176 233 VMVGRAAY 240 (376)
Q Consensus 233 VmiGRa~l 240 (376)
|++--+-.
T Consensus 282 v~~k~~~~ 289 (400)
T 3mwc_A 282 WNIKIQRV 289 (400)
T ss_dssp EEECHHHH
T ss_pred EEEcchhh
Confidence 98844433
No 223
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=97.28 E-value=0.0012 Score=61.37 Aligned_cols=135 Identities=14% Similarity=0.130 Sum_probs=84.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHH---HHHHHHHHHhcccCccEEEEecCCCCCCccH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPK---FVGEAMSVIAANTNVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~---~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~ 151 (376)
..+.-+.-++.+.+.|+|.||+-+ + +|..+..+.+ .+.+-+.+|++.++ ...+|+-+-.....+
T Consensus 104 ~~~~Kv~E~~~Av~~GAdEIDmVi-----n------ig~lksg~~~~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~L~d- 170 (281)
T 2a4a_A 104 SMEKVLNDTEKALDDGADEIDLVI-----N------YKKIIENTDEGLKEATKLTQSVKKLLT-NKILKVIIEVGELKT- 170 (281)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC-----C------HHHHHHSHHHHHHHHHHHHHHHHTTCT-TSEEEEECCHHHHCS-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEec-----c------hHhhhCCChhHHHHHHHHHHHHHHHhc-CCceEEEEecccCCc-
Confidence 344444455666777999999853 1 3544455667 88888899988874 245666553211111
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhh--------CCCCeEEEecCCCCHHHHH
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD--------FPDLTFTLNGGINTVDEVN 223 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~--------~~~ipVi~nGgI~s~~da~ 223 (376)
++.+....++..++|+|+|-.+.+... .| + .+-+...+.+.+++ -.+++|-++|||+|.+++.
T Consensus 171 ~e~i~~A~~ia~eaGADfVKTSTGf~~-~g---A-----T~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al 241 (281)
T 2a4a_A 171 EDLIIKTTLAVLNGNADFIKTSTGKVQ-IN---A-----TPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTAS 241 (281)
T ss_dssp HHHHHHHHHHHHTTTCSEEECCCSCSS-CC---C-----CHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCCCCC-CC---C-----CHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHH
Confidence 233333456677899999987643210 11 1 01113344455432 2479999999999999999
Q ss_pred HHHHcCcC
Q 017176 224 AALRKGAH 231 (376)
Q Consensus 224 ~~l~~Gad 231 (376)
++++.|++
T Consensus 242 ~~i~aga~ 249 (281)
T 2a4a_A 242 HYILLARR 249 (281)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhh
Confidence 99987665
No 224
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=97.27 E-value=0.0026 Score=59.75 Aligned_cols=201 Identities=11% Similarity=0.092 Sum_probs=115.5
Q ss_pred CCChHHHHHHHHHhCCCcEEEecceeec--ccccccc---hhhhhhc----c-CCCCCCEEEEe---cCCCHHHHHHHHH
Q 017176 18 DWTDNHYRTLARLISKHAWLYTEMLAAE--TIIYQQG---NLDRFLA----F-SPEQHPIVLQI---GGSNLDNLAKATE 84 (376)
Q Consensus 18 ~~td~~~r~~~~~~Gg~gl~~te~v~~~--~~~~~~~---~~~~~~~----~-~~~~~p~~vQL---~g~~~~~~~~aa~ 84 (376)
+.-|.....++.+.| +..+++.-.+.. .+...+. .....+. + ...+.|+++-+ +| +++...+.++
T Consensus 28 ~a~D~~sA~l~e~aG-f~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg-~~~~v~~~v~ 105 (298)
T 3eoo_A 28 GAITAYAAKMAEAVG-FKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTGWG-GAFNIARTIR 105 (298)
T ss_dssp ECSSHHHHHHHHHHT-CSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTCSS-SHHHHHHHHH
T ss_pred cCCCHHHHHHHHHcC-CCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCCCC-CHHHHHHHHH
Confidence 556778877777776 676665532221 1222211 0111110 1 11356777765 34 7888899999
Q ss_pred HHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcc-cCccEEEEecCCCCCCccHHHHHHHHHHHhh
Q 017176 85 LANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN-TNVPVSVKCRIGVDDHDSYNQLCDFIYKVSS 163 (376)
Q Consensus 85 ~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~-~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e 163 (376)
.+.++|+.+|.|--+... |.+.+.. |..|. ..+...+-+++.+++ .+.++.|--|..-.....+++.++.. +.+.
T Consensus 106 ~l~~aGaagv~iEDq~~~-k~cGh~~-gk~l~-~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra-~ay~ 181 (298)
T 3eoo_A 106 SFIKAGVGAVHLEDQVGQ-KRCGHRP-GKECV-PAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIERA-IAYV 181 (298)
T ss_dssp HHHHTTCSEEEEECBCCC-CCTTCCC-CCCBC-CHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHHHH-HHHH
T ss_pred HHHHhCCeEEEECCCCCC-cccCCCC-CCeec-CHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHHHH-HhhH
Confidence 999999999999765432 3233322 33444 444444444444443 34556665665211112355666553 4556
Q ss_pred cCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEe---cCCCCHHHHHHHHHcCcCeeEEchHHh
Q 017176 164 LSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN---GGINTVDEVNAALRKGAHHVMVGRAAY 240 (376)
Q Consensus 164 ~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~n---GgI~s~~da~~~l~~Gad~VmiGRa~l 240 (376)
++|+|.|-+++.+. .+.+.++.+.+ ++||++| +|-...-+..++-+.|+..|.+|-.++
T Consensus 182 ~AGAD~if~~~~~~-----------------~ee~~~~~~~~-~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~ 243 (298)
T 3eoo_A 182 EAGADMIFPEAMKT-----------------LDDYRRFKEAV-KVPILANLTEFGSTPLFTLDELKGANVDIALYCCGAY 243 (298)
T ss_dssp HTTCSEEEECCCCS-----------------HHHHHHHHHHH-CSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECSHHH
T ss_pred hcCCCEEEeCCCCC-----------------HHHHHHHHHHc-CCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHH
Confidence 89999999998531 45667777775 6899876 332111224445557999999987765
Q ss_pred hC
Q 017176 241 QN 242 (376)
Q Consensus 241 ~~ 242 (376)
.-
T Consensus 244 ra 245 (298)
T 3eoo_A 244 RA 245 (298)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 225
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.21 E-value=0.00041 Score=62.69 Aligned_cols=67 Identities=15% Similarity=0.089 Sum_probs=51.7
Q ss_pred hcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHc-CcCeeEEchHHhh
Q 017176 163 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GAHHVMVGRAAYQ 241 (376)
Q Consensus 163 e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~-Gad~VmiGRa~l~ 241 (376)
.+.|+|+|-+++... . ...+++++++..++++||++.||| +++.+.+.++. |+++|. |+++..
T Consensus 127 ~~~Gad~vk~Fpa~~--~------------gG~~~lk~l~~~~~~ipvvaiGGI-~~~N~~~~l~agga~~v~-gS~i~~ 190 (224)
T 1vhc_A 127 LEMGISAVKFFPAEA--S------------GGVKMIKALLGPYAQLQIMPTGGI-GLHNIRDYLAIPNIVACG-GSWFVE 190 (224)
T ss_dssp HHTTCCEEEETTTTT--T------------THHHHHHHHHTTTTTCEEEEBSSC-CTTTHHHHHTSTTBCCEE-ECGGGC
T ss_pred HHCCCCEEEEeeCcc--c------------cCHHHHHHHHhhCCCCeEEEECCc-CHHHHHHHHhcCCCEEEE-EchhcC
Confidence 368999999866211 0 015677788777778999999999 67899999996 999999 998877
Q ss_pred CCch
Q 017176 242 NPWY 245 (376)
Q Consensus 242 ~P~l 245 (376)
.+.+
T Consensus 191 ~~~i 194 (224)
T 1vhc_A 191 KKLI 194 (224)
T ss_dssp HHHH
T ss_pred cchh
Confidence 6654
No 226
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=97.21 E-value=0.0057 Score=55.12 Aligned_cols=136 Identities=14% Similarity=0.068 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHH
Q 017176 76 LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLC 155 (376)
Q Consensus 76 ~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~ 155 (376)
.+.-..-++. .+.|+|.||+.+ + +|.....+.+.+.+-+.++++.++- ..+|+-+-.... +.++ +
T Consensus 66 ~~~k~~E~~~-i~~GAdEID~Vi-----n------ig~~~~g~~~~v~~ei~~v~~a~~~-~~lKvIlEt~~L-t~ee-i 130 (226)
T 1vcv_A 66 TASRIALVSR-LAEVADEIDVVA-----P------IGLVKSRRWAEVRRDLISVVGAAGG-RVVKVITEEPYL-RDEE-R 130 (226)
T ss_dssp HHHHHHHHHH-HTTTCSEEEEEC-----C------HHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGC-CHHH-H
T ss_pred hHHHHHHHHH-HHCCCCEEEEec-----c------hhhhcCCCHHHHHHHHHHHHHHHcC-CCceEEEeccCC-CHHH-H
Confidence 3333334445 677999999964 1 3544556778888888888887642 255644322221 2233 3
Q ss_pred HHHHHHhhcCCccEEEEccCccc-----cCCC-CCCCCCCCCcccHHHHHHHHhhC-CCCeEEEecCCCCHHHHHHHHHc
Q 017176 156 DFIYKVSSLSPTRHFIIHSRKAL-----LNGI-SPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRK 228 (376)
Q Consensus 156 ~~i~~~~e~~Gvd~I~vh~r~~~-----~~g~-~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~nGgI~s~~da~~~l~~ 228 (376)
....++..++|+|+|-.+.+... ..|. .++ .+-+.+.+.+.++.. .+++|-++|||+|.+++.++++.
T Consensus 131 ~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gA-----t~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~a 205 (226)
T 1vcv_A 131 YTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHS-----TPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIVDA 205 (226)
T ss_dssp HHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSC-----CHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCC-----CHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHH
Confidence 33456677899999987744320 0010 111 011133444443333 36999999999999999999997
Q ss_pred ---CcC
Q 017176 229 ---GAH 231 (376)
Q Consensus 229 ---Gad 231 (376)
||+
T Consensus 206 ~~~Ga~ 211 (226)
T 1vcv_A 206 IGWGED 211 (226)
T ss_dssp HCSCSC
T ss_pred HHCCCC
Confidence 877
No 227
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=97.21 E-value=0.0058 Score=59.47 Aligned_cols=129 Identities=11% Similarity=0.041 Sum_probs=90.2
Q ss_pred ecCCCHHH-HHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCC
Q 017176 71 IGGSNLDN-LAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDD 147 (376)
Q Consensus 71 L~g~~~~~-~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~ 147 (376)
+...+++. +.++++.+++.||..+-+..|+. +++.-.+.+++||+.+ ++++.|...-+|+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~----------------~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~ 207 (382)
T 3dgb_A 144 LASGDTAKDIAEAQKMLDLRRHRIFKLKIGAG----------------EVDRDLAHVIAIKKALGDSASVRVDVNQAWDE 207 (382)
T ss_dssp ECSSCHHHHHHHHHHHHHTTSCSEEEEECCSS----------------CHHHHHHHHHHHHHHHGGGSEEEEECTTCBCH
T ss_pred ecCCChHHHHHHHHHHHHhCCCCEEEEeeCCC----------------CHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCH
Confidence 33345555 44555555657999998876531 3455677888888876 46888888878763
Q ss_pred CccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH
Q 017176 148 HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR 227 (376)
Q Consensus 148 ~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~ 227 (376)
++.+++ .+.+++.|+.+|. . .+++.+++.++++.+.. ++||.+...+.+..++.++++
T Consensus 208 ----~~A~~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~~~ 265 (382)
T 3dgb_A 208 ----AVALRA-CRILGGNGIDLIE----Q------------PISRNNRAGMVRLNASS-PAPIMADESIECVEDAFNLAR 265 (382)
T ss_dssp ----HHHHHH-HHHHHTTTCCCEE----C------------CBCTTCHHHHHHHHHHC-SSCEEESTTCSSHHHHHHHHH
T ss_pred ----HHHHHH-HHHHhhcCcCeee----C------------CCCccCHHHHHHHHHhC-CCCEEeCCCcCCHHHHHHHHH
Confidence 344443 4456778888775 1 11233477777887765 899999999999999999998
Q ss_pred -cCcCeeEEch
Q 017176 228 -KGAHHVMVGR 237 (376)
Q Consensus 228 -~Gad~VmiGR 237 (376)
..+|.|++--
T Consensus 266 ~~~~d~v~~k~ 276 (382)
T 3dgb_A 266 EGAASVFALKI 276 (382)
T ss_dssp HTCCSEEEECH
T ss_pred cCCCCEEEecc
Confidence 6799998843
No 228
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=97.13 E-value=0.0067 Score=57.11 Aligned_cols=201 Identities=13% Similarity=0.062 Sum_probs=112.4
Q ss_pred CCChHHHHHHHHHhCCCcEEEe-cceeecc-cccccc---hh-------hhhhccCCCCCCEEEEe---cCCCHHHHHHH
Q 017176 18 DWTDNHYRTLARLISKHAWLYT-EMLAAET-IIYQQG---NL-------DRFLAFSPEQHPIVLQI---GGSNLDNLAKA 82 (376)
Q Consensus 18 ~~td~~~r~~~~~~Gg~gl~~t-e~v~~~~-~~~~~~---~~-------~~~~~~~~~~~p~~vQL---~g~~~~~~~~a 82 (376)
+.-|....+++.+.| +..+++ ....+.. +...+. .. ..+.+..+...|+++-+ +| +++...+.
T Consensus 31 ~a~D~~sA~l~e~aG-f~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg-~~~~v~~~ 108 (307)
T 3lye_A 31 GVYDGLSARTAMELG-FKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYG-GPIMVART 108 (307)
T ss_dssp EECSHHHHHHHHHTT-CSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSS-SHHHHHHH
T ss_pred cCcCHHHHHHHHHcC-CCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCC-CHHHHHHH
Confidence 566888888887776 776665 4322211 222211 01 11112222257888776 34 58888899
Q ss_pred HHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcc---cCccEEEEecCCCCCCccHHHHHHHHH
Q 017176 83 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN---TNVPVSVKCRIGVDDHDSYNQLCDFIY 159 (376)
Q Consensus 83 a~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~---~~~pv~vKiR~g~~~~~~~~~~~~~i~ 159 (376)
++.+.++|+.+|.|--.... | +.|+.++.-+-..+...+-|++.+++ .+.++.|--|....-...+++.++..
T Consensus 109 v~~l~~aGaagv~iEDq~~~-k--~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra- 184 (307)
T 3lye_A 109 VEHYIRSGVAGAHLEDQILT-K--RCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEECIERL- 184 (307)
T ss_dssp HHHHHHTTCCEEEECCBCCC-C----------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHHHHHHH-
T ss_pred HHHHHHcCCeEEEEcCCCCC-c--ccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHHHHHHH-
Confidence 99999999999999765432 2 23333443344555545555555443 25566666665211112355666653
Q ss_pred HHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEe---cCCCCHHHHHHHHHcCcCeeEEc
Q 017176 160 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN---GGINTVDEVNAALRKGAHHVMVG 236 (376)
Q Consensus 160 ~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~n---GgI~s~~da~~~l~~Gad~VmiG 236 (376)
+.+.++|+|.|-+++.+. .+.+.++.+.++.+||.+| |+-...-...++-+.|+..|..+
T Consensus 185 ~ay~eAGAD~ifi~~~~~-----------------~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~t~~eL~~lGv~~v~~~ 247 (307)
T 3lye_A 185 RAARDEGADVGLLEGFRS-----------------KEQAAAAVAALAPWPLLLNSVENGHSPLITVEEAKAMGFRIMIFS 247 (307)
T ss_dssp HHHHHTTCSEEEECCCSC-----------------HHHHHHHHHHHTTSCBEEEEETTSSSCCCCHHHHHHHTCSEEEEE
T ss_pred HHHHHCCCCEEEecCCCC-----------------HHHHHHHHHHccCCceeEEeecCCCCCCCCHHHHHHcCCeEEEEC
Confidence 455689999999997431 4556677766545888765 33211112344445799999887
Q ss_pred hHHhh
Q 017176 237 RAAYQ 241 (376)
Q Consensus 237 Ra~l~ 241 (376)
-.++.
T Consensus 248 ~~~~r 252 (307)
T 3lye_A 248 FATLA 252 (307)
T ss_dssp TTTHH
T ss_pred hHHHH
Confidence 76553
No 229
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=97.10 E-value=0.011 Score=58.63 Aligned_cols=147 Identities=16% Similarity=0.114 Sum_probs=98.9
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecC
Q 017176 64 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI 143 (376)
Q Consensus 64 ~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~ 143 (376)
+-|+.-+=|.-++-+. .+ +..+|+|.|=|++.+- +.+.+.++++..++ .+..+.|-+
T Consensus 108 ~lPvLrKDFI~d~~Qi---~e-a~~~GAD~ILLi~a~l----------------~~~~l~~l~~~a~~-lgm~~LvEv-- 164 (452)
T 1pii_A 108 PQPILCKDFIIDPYQI---YL-ARYYQADACLLMLSVL----------------DDDQYRQLAAVAHS-LEMGVLTEV-- 164 (452)
T ss_dssp CSCEEEESCCCSHHHH---HH-HHHTTCSEEEEETTTC----------------CHHHHHHHHHHHHH-TTCEEEEEE--
T ss_pred CCCeEEEeccCCHHHH---HH-HHHcCCCEEEEEcccC----------------CHHHHHHHHHHHHH-cCCeEEEEe--
Confidence 4566666666555432 22 6678999999986421 13567777777665 466665532
Q ss_pred CCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCC-CCeEEEecCCCCHHHH
Q 017176 144 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEV 222 (376)
Q Consensus 144 g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi~nGgI~s~~da 222 (376)
.+.+|+.. . .+.|++.|-+..|.- ..+ ..+++...++.+..+ ++++|+-|||.|++|+
T Consensus 165 -----h~~eE~~~----A-~~lga~iIGinnr~L--~t~---------~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv 223 (452)
T 1pii_A 165 -----SNEEEQER----A-IALGAKVVGINNRDL--RDL---------SIDLNRTRELAPKLGHNVTVISESGINTYAQV 223 (452)
T ss_dssp -----CSHHHHHH----H-HHTTCSEEEEESEET--TTT---------EECTHHHHHHHHHHCTTSEEEEESCCCCHHHH
T ss_pred -----CCHHHHHH----H-HHCCCCEEEEeCCCC--CCC---------CCCHHHHHHHHHhCCCCCeEEEECCCCCHHHH
Confidence 23445432 2 258999999988753 111 122555556655544 6899999999999999
Q ss_pred HHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhC
Q 017176 223 NAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYG 256 (376)
Q Consensus 223 ~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g 256 (376)
.++.+. +|+|.||.+++..++. ...+.....|
T Consensus 224 ~~~~~~-a~avLVGealmr~~d~-~~~~~~l~~~ 255 (452)
T 1pii_A 224 RELSHF-ANGFLIGSALMAHDDL-HAAVRRVLLG 255 (452)
T ss_dssp HHHTTT-CSEEEECHHHHTCSCH-HHHHHHHHHC
T ss_pred HHHHHh-CCEEEEcHHHcCCcCH-HHHHHHHHHH
Confidence 999999 9999999999998886 4444444333
No 230
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=97.10 E-value=0.01 Score=57.92 Aligned_cols=131 Identities=11% Similarity=0.026 Sum_probs=94.6
Q ss_pred EEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc---CccEEEEecC
Q 017176 67 IVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT---NVPVSVKCRI 143 (376)
Q Consensus 67 ~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~---~~pv~vKiR~ 143 (376)
+-..+...+++.+.+.++.+.+.||..+.+..|++ +++.-.+.+++||+.+ ++++.|...-
T Consensus 156 ~y~s~~~~~~e~~~~~a~~~~~~G~~~~KlKvg~~----------------~~~~d~~~v~avR~a~gg~~~~L~vDaN~ 219 (391)
T 4e8g_A 156 SYYATGIGQPDEIARIAAEKVAEGFPRLQIKIGGR----------------PVEIDIETVRKVWERIRGTGTRLAVDGNR 219 (391)
T ss_dssp CCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSS----------------CHHHHHHHHHHHHHHHTTTTCEEEEECTT
T ss_pred EeEEcCCCCHHHHHHHHHHHHHcCCcEEEEcCCCC----------------CHHHHHHHHHHHHHHhCCCCCeEEEeCCC
Confidence 33445567899999999988889999999987652 3455567788887764 4678888777
Q ss_pred CCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHH
Q 017176 144 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVN 223 (376)
Q Consensus 144 g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~ 223 (376)
+|+. ++.+++ .+.+++.++ +|. + | ..+++..+++.+.. ++||.+.-.+.+..++.
T Consensus 220 ~w~~----~~A~~~-~~~L~~~~i-~iE-----e------P-------~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~ 274 (391)
T 4e8g_A 220 SLPS----RDALRL-SRECPEIPF-VLE-----Q------P-------CNTLEEIAAIRGRV-QHGIYLDESGEDLSTVI 274 (391)
T ss_dssp CCCH----HHHHHH-HHHCTTSCE-EEE-----S------C-------SSSHHHHHHHGGGC-CSCEEESTTCCSHHHHH
T ss_pred CCCH----HHHHHH-HHHHhhcCe-EEe-----c------C-------CccHHHHHHHHhhC-CCCEEeCCCCCCHHHHH
Confidence 7763 344443 345667777 663 0 0 11367777777664 89999999999999999
Q ss_pred HHHH-cCcCeeEEchH
Q 017176 224 AALR-KGAHHVMVGRA 238 (376)
Q Consensus 224 ~~l~-~Gad~VmiGRa 238 (376)
++++ ..+|.|++--+
T Consensus 275 ~~~~~~a~d~v~ik~~ 290 (391)
T 4e8g_A 275 RAAGQGLCDGFGMKLT 290 (391)
T ss_dssp HHHHTTCCSEEEEEHH
T ss_pred HHHHcCCCCEEEeCcc
Confidence 9998 56899988443
No 231
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=97.08 E-value=0.0022 Score=58.99 Aligned_cols=140 Identities=16% Similarity=0.199 Sum_probs=86.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccC-ccEEEEecCCCCCCccHHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIGVDDHDSYNQ 153 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~-~pv~vKiR~g~~~~~~~~~ 153 (376)
..+.-+.-++.+.+.|+|.||+.+ + +|.-+..+.+.+.+-+.++++.++ .+..+|+-+-.....+ ++
T Consensus 83 ~~~~Kv~E~~~Av~~GAdEIDmVi-----n------ig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d-~e 150 (260)
T 1p1x_A 83 DIDIALAETRAAIAYGADEVDVVF-----P------YRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKD-EA 150 (260)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC-----C------HHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCS-HH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEec-----c------HHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCc-HH
Confidence 344444455667778999999964 1 344444566778888888887663 2345665553211111 23
Q ss_pred HHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHH---HHHHHHhh---CCCCeEEEecCCCCHHHHHHHHH
Q 017176 154 LCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE---YYYALLRD---FPDLTFTLNGGINTVDEVNAALR 227 (376)
Q Consensus 154 ~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~---~v~~~~~~---~~~ipVi~nGgI~s~~da~~~l~ 227 (376)
.+....++..++|+|+|-.+.+... .| + ..+ .+.+.+++ -.+++|-++|||+|.+++.++++
T Consensus 151 ~i~~a~~ia~eaGADfVKTSTGf~~-~g---A--------t~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~ 218 (260)
T 1p1x_A 151 LIRKASEISIKAGADFIKTSTGKVA-VN---A--------TPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLA 218 (260)
T ss_dssp HHHHHHHHHHHTTCSEEECCCSCSS-CC---C--------CHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEeCCCCCC-CC---C--------CHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHH
Confidence 3333456677899999987643210 11 1 133 44444442 24799999999999999999998
Q ss_pred cCcCeeEEchHHhhCCch
Q 017176 228 KGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 228 ~Gad~VmiGRa~l~~P~l 245 (376)
.|++ .|++.|+
T Consensus 219 aga~-------~lG~~w~ 229 (260)
T 1p1x_A 219 IADE-------LFGADWA 229 (260)
T ss_dssp HHHH-------HHCTTSC
T ss_pred hhhh-------hcccccc
Confidence 7665 5666665
No 232
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=97.02 E-value=0.021 Score=53.21 Aligned_cols=197 Identities=10% Similarity=0.061 Sum_probs=117.6
Q ss_pred CCChHHHHHHHHHhCCCcEEEecce--eecccccccc---hhhhhhc-----cCCCCCCEEEEe---cCCCHHHHHHHHH
Q 017176 18 DWTDNHYRTLARLISKHAWLYTEML--AAETIIYQQG---NLDRFLA-----FSPEQHPIVLQI---GGSNLDNLAKATE 84 (376)
Q Consensus 18 ~~td~~~r~~~~~~Gg~gl~~te~v--~~~~~~~~~~---~~~~~~~-----~~~~~~p~~vQL---~g~~~~~~~~aa~ 84 (376)
+.-|....+++.+.| +..+++.-. +...+.+.+. ....++. ....+.|+++-+ +| +++...+.++
T Consensus 27 ~a~D~~sA~i~e~aG-f~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg-~~~~~~~~v~ 104 (287)
T 3b8i_A 27 SVFDPMSARIAADLG-FECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYG-NALNVMRTVV 104 (287)
T ss_dssp ECCSHHHHHHHHHTT-CSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTTCSS-SHHHHHHHHH
T ss_pred cCCCHHHHHHHHHcC-CCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC-CHHHHHHHHH
Confidence 667888888887776 666665533 2111222221 1111111 123456777665 45 8888999999
Q ss_pred HHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccHHHHHHHHHHHhh
Q 017176 85 LANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSS 163 (376)
Q Consensus 85 ~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e 163 (376)
++.++|+++|.|--+... |-+.+. .+. +-..+...+-|++++++- +.++.|--|..- ....++++++. ++.++
T Consensus 105 ~l~~aGa~gv~iED~~~p-Krcgh~--~gk-l~~~~e~~~~I~aa~~a~~~~~~~i~aRtda-a~~gl~~ai~R-a~ay~ 178 (287)
T 3b8i_A 105 ELERAGIAALTIEDTLLP-AQFGRK--STD-LICVEEGVGKIRAALEARVDPALTIIARTNA-ELIDVDAVIQR-TLAYQ 178 (287)
T ss_dssp HHHHHTCSEEEEECBCCS-CCTTTC--TTC-BCCHHHHHHHHHHHHHHCCSTTSEEEEEEET-TTSCHHHHHHH-HHHHH
T ss_pred HHHHhCCeEEEEcCCCCc-cccCCC--CCC-ccCHHHHHHHHHHHHHcCCCCCcEEEEechh-hhcCHHHHHHH-HHHHH
Confidence 998999999999877542 323333 344 567777777777776653 233333334321 12335666665 35667
Q ss_pred cCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEe-cCCCCHHHHHHHHHcCcCeeEEchHHh
Q 017176 164 LSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN-GGINTVDEVNAALRKGAHHVMVGRAAY 240 (376)
Q Consensus 164 ~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~n-GgI~s~~da~~~l~~Gad~VmiGRa~l 240 (376)
++|+|.|.+++-. ..+.+.++.+++ ++|++.. |+-...-+..++-+.|+..|..|-.++
T Consensus 179 eAGAd~i~~e~~~-----------------~~~~~~~i~~~~-~~P~ii~~~g~~~~~~~~eL~~lGv~~v~~~~~~~ 238 (287)
T 3b8i_A 179 EAGADGICLVGVR-----------------DFAHLEAIAEHL-HIPLMLVTYGNPQLRDDARLARLGVRVVVNGHAAY 238 (287)
T ss_dssp HTTCSEEEEECCC-----------------SHHHHHHHHTTC-CSCEEEECTTCGGGCCHHHHHHTTEEEEECCCHHH
T ss_pred HcCCCEEEecCCC-----------------CHHHHHHHHHhC-CCCEEEeCCCCCCCCCHHHHHHcCCcEEEEChHHH
Confidence 8999999999732 145567777765 7998832 322211233455557999888876554
No 233
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.97 E-value=0.0013 Score=58.53 Aligned_cols=72 Identities=13% Similarity=-0.066 Sum_probs=52.8
Q ss_pred CCccEEEEccCc--cccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhh
Q 017176 165 SPTRHFIIHSRK--ALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 241 (376)
Q Consensus 165 ~Gvd~I~vh~r~--~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~ 241 (376)
.|+|+|.+.+-. ....+. -++..++.+.++.+.. +++||++.|||. ++.+.++++.|+++|.+++++..
T Consensus 106 ~GaDyv~~g~vf~t~sk~~~-------~~~~g~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~~~Ga~gVav~s~i~~ 177 (210)
T 3ceu_A 106 HFYDYVFMSPIYDSISKVNY-------YSTYTAEELREAQKAKIIDSKVMALGGIN-EDNLLEIKDFGFGGAVVLGDLWN 177 (210)
T ss_dssp GGSSEEEECCCC----------------CCCCHHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHHHTTCSEEEESHHHHT
T ss_pred hCCCEEEECCcCCCCCCCCC-------CCCCCHHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHHHhCCCEEEEhHHhHc
Confidence 799999976531 111111 1234578888877653 589999999997 89999999999999999999986
Q ss_pred CCc
Q 017176 242 NPW 244 (376)
Q Consensus 242 ~P~ 244 (376)
.++
T Consensus 178 ~~d 180 (210)
T 3ceu_A 178 KFD 180 (210)
T ss_dssp TCC
T ss_pred CCC
Confidence 544
No 234
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=96.96 E-value=0.01 Score=56.22 Aligned_cols=195 Identities=9% Similarity=-0.022 Sum_probs=116.3
Q ss_pred CCChHHHHHHHHHhCCCcEEEecce--eecccccccc---hhhh-------hhccCCCCCCEEEEe---cCCCHHHHHHH
Q 017176 18 DWTDNHYRTLARLISKHAWLYTEML--AAETIIYQQG---NLDR-------FLAFSPEQHPIVLQI---GGSNLDNLAKA 82 (376)
Q Consensus 18 ~~td~~~r~~~~~~Gg~gl~~te~v--~~~~~~~~~~---~~~~-------~~~~~~~~~p~~vQL---~g~~~~~~~~a 82 (376)
+.-|....+++.+.| +..+++.-. +...+.+.+. .... +.+.. .+.|+++-+ +| +++...+.
T Consensus 45 ~ayD~~sA~i~e~aG-fdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~-~~~PviaD~d~Gyg-~~~~v~~t 121 (318)
T 1zlp_A 45 GVQDALSAAVVEKTG-FHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAA-PNLCVVVDGDTGGG-GPLNVQRF 121 (318)
T ss_dssp EECSHHHHHHHHHTT-CSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHS-SSSEEEEECTTCSS-SHHHHHHH
T ss_pred cCCCHHHHHHHHHcC-CCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhc-cCCCEEEeCCCCCC-CHHHHHHH
Confidence 566788888877776 777776642 2111222221 1111 11111 257787765 45 78889999
Q ss_pred HHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccHHHHHHHHHHH
Q 017176 83 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKV 161 (376)
Q Consensus 83 a~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~~~~~~i~~~ 161 (376)
++++.++|+++|.|--+... +.+ |+.|+.-+-..+...+-|++++++. +.++.|--|..-.....++++++. ++.
T Consensus 122 v~~l~~aGaagv~iED~~~~-k~c--gH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai~R-a~A 197 (318)
T 1zlp_A 122 IRELISAGAKGVFLEDQVWP-KKC--GHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIRR-ANL 197 (318)
T ss_dssp HHHHHHTTCCEEEEECBCSS-CCC--SSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHHHH-HHH
T ss_pred HHHHHHcCCcEEEECCCCCC-ccc--cCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHHHH-HHH
Confidence 99999999999999876542 333 3334443344555555556655543 334444445411101123556654 346
Q ss_pred hhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEe---c---CCCCHHHHHHHHHcCcCeeEE
Q 017176 162 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN---G---GINTVDEVNAALRKGAHHVMV 235 (376)
Q Consensus 162 ~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~n---G---gI~s~~da~~~l~~Gad~Vmi 235 (376)
++++|+|.|.+++-. ..+.+.++.+++ ++|+.+| | ...+ ..++-+.|+..|.+
T Consensus 198 y~eAGAd~i~~e~~~-----------------~~e~~~~i~~~l-~~P~lan~~~~g~~~~~~---~~eL~~lGv~~v~~ 256 (318)
T 1zlp_A 198 YKEAGADATFVEAPA-----------------NVDELKEVSAKT-KGLRIANMIEGGKTPLHT---PEEFKEMGFHLIAH 256 (318)
T ss_dssp HHHTTCSEEEECCCC-----------------SHHHHHHHHHHS-CSEEEEEECTTSSSCCCC---HHHHHHHTCCEEEE
T ss_pred HHHcCCCEEEEcCCC-----------------CHHHHHHHHHhc-CCCEEEEeccCCCCCCCC---HHHHHHcCCeEEEE
Confidence 678999999998742 145667777776 7999766 2 2334 34445579999999
Q ss_pred chHHh
Q 017176 236 GRAAY 240 (376)
Q Consensus 236 GRa~l 240 (376)
|-.++
T Consensus 257 ~~~~~ 261 (318)
T 1zlp_A 257 SLTAV 261 (318)
T ss_dssp CSHHH
T ss_pred chHHH
Confidence 87765
No 235
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=96.93 E-value=0.019 Score=55.74 Aligned_cols=131 Identities=7% Similarity=-0.028 Sum_probs=87.5
Q ss_pred EecCCCHHHHHH-HHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccC--ccEEEEecCCCC
Q 017176 70 QIGGSNLDNLAK-ATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN--VPVSVKCRIGVD 146 (376)
Q Consensus 70 QL~g~~~~~~~~-aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~--~pv~vKiR~g~~ 146 (376)
.+...+++...+ +++.+++.||..+-+..|+ .+++.-.+.+++||+.++ +++.|...-+|+
T Consensus 142 t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~----------------~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~ 205 (381)
T 3fcp_A 142 TLASGDTAKDIAEGEKLLAEGRHRAFKLKIGA----------------RELATDLRHTRAIVEALGDRASIRVDVNQAWD 205 (381)
T ss_dssp EECSSCHHHHHHHHHHHTC----CEEEEECCS----------------SCHHHHHHHHHHHHHHTCTTCEEEEECTTCBC
T ss_pred EecCCChHHHHHHHHHHHHhCCCCEEEEecCC----------------CChHHHHHHHHHHHHHcCCCCeEEEECCCCCC
Confidence 344446665544 4444444699999887653 135566778899998874 678888777776
Q ss_pred CCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHH
Q 017176 147 DHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL 226 (376)
Q Consensus 147 ~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l 226 (376)
. ++.+++ .+.+++.|+.+|. . .+++.+++.++++.+.. ++||.+...+.+..++.+++
T Consensus 206 ~----~~A~~~-~~~l~~~~i~~iE----e------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~~ 263 (381)
T 3fcp_A 206 A----ATGAKG-CRELAAMGVDLIE----Q------------PVSAHDNAALVRLSQQI-ETAILADEAVATAYDGYQLA 263 (381)
T ss_dssp H----HHHHHH-HHHHHHTTCSEEE----C------------CBCTTCHHHHHHHHHHS-SSEEEESTTCCSHHHHHHHH
T ss_pred H----HHHHHH-HHHHhhcCcccee----C------------CCCcccHHHHHHHHHhC-CCCEEECCCcCCHHHHHHHH
Confidence 3 344443 3456678888874 1 12233477777887765 89999999999999999999
Q ss_pred H-cCcCeeEEchH
Q 017176 227 R-KGAHHVMVGRA 238 (376)
Q Consensus 227 ~-~Gad~VmiGRa 238 (376)
+ ..+|.|++--.
T Consensus 264 ~~~a~d~v~~k~~ 276 (381)
T 3fcp_A 264 QQGFTGAYALKIA 276 (381)
T ss_dssp HTTCCSEEEECHH
T ss_pred HcCCCCEEEeccc
Confidence 8 67999988433
No 236
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=96.92 E-value=0.017 Score=57.26 Aligned_cols=125 Identities=9% Similarity=0.018 Sum_probs=91.2
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCcc
Q 017176 73 GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDS 150 (376)
Q Consensus 73 g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~ 150 (376)
+.+++++++.++.+.+.||..+-++.|+ +++.-.+.+++||+.+ ++++.|...-+|+.
T Consensus 199 ~~~~e~~~~~a~~~~~~Gf~~~KlKvG~-----------------~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~--- 258 (441)
T 4a35_A 199 GYSDDTLKQLCAQALKDGWTRFKVKVGA-----------------DLQDDMRRCQIIRDMIGPEKTLMMDANQRWDV--- 258 (441)
T ss_dssp TCCHHHHHHHHHHHHHTTCCEEEEECSS-----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCH---
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEcCCC-----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH---
Confidence 5589999999998888999999987653 3455667788888876 56788887777753
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhh--CCCCeEEEecCCCCHHHHHHHHH-
Q 017176 151 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD--FPDLTFTLNGGINTVDEVNAALR- 227 (376)
Q Consensus 151 ~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~--~~~ipVi~nGgI~s~~da~~~l~- 227 (376)
.+.+++ .+.+++.++.+|. . .+++-+++..+++.+. ..++||.+.-.+.+..++.++++
T Consensus 259 -~~A~~~-~~~L~~~~~~~iE----e------------P~~~~d~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~ 320 (441)
T 4a35_A 259 -PEAVEW-MSKLAKFKPLWIE----E------------PTSPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQA 320 (441)
T ss_dssp -HHHHHH-HHHHGGGCCSEEE----C------------CSCTTCHHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHT
T ss_pred -HHHHHH-HHhhcccCccEEe----C------------CCCcccHHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHc
Confidence 344443 4456778887774 1 1122336666666654 13799999999999999999998
Q ss_pred cCcCeeEE
Q 017176 228 KGAHHVMV 235 (376)
Q Consensus 228 ~Gad~Vmi 235 (376)
..+|.|++
T Consensus 321 ~a~div~~ 328 (441)
T 4a35_A 321 KALQFLQI 328 (441)
T ss_dssp TCCSEECC
T ss_pred CCCCEEEE
Confidence 56898877
No 237
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=96.91 E-value=0.0092 Score=58.77 Aligned_cols=149 Identities=13% Similarity=0.058 Sum_probs=100.3
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCcccc----CCCCcccccc---CCHHHHHHHHHHHhccc--Cc
Q 017176 65 HPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVA----GHGCFGVSLM---LDPKFVGEAMSVIAANT--NV 135 (376)
Q Consensus 65 ~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~----r~g~yG~~l~---~~~~~~~eiv~~v~~~~--~~ 135 (376)
-|+...+.+.+++++.+.++.+.+.||..+-+..|.+..+.. ....+.+... .+++...+.++++|+.+ ++
T Consensus 143 v~~y~~~~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~~~ 222 (421)
T 4hnl_A 143 IPAYTHAVADNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGNQF 222 (421)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred cceecccCCCCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCCCc
Confidence 355555666789999999999999999999999886432111 1111122222 23456677888888887 45
Q ss_pred cEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecC
Q 017176 136 PVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG 215 (376)
Q Consensus 136 pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGg 215 (376)
.+.+-..-+|+ .++.+++ .+.+++.++.+|. . .+++-+++.++++++.. ++||.+.-.
T Consensus 223 ~l~vDan~~~~----~~~A~~~-~~~l~~~~i~~iE----e------------P~~~~d~~~~~~l~~~~-~ipIa~dE~ 280 (421)
T 4hnl_A 223 QMLHDVHERLH----PNQAIQF-AKAAEPYQLFFLE----D------------ILPPDQSHWLTQLRSQS-ATPIATGEL 280 (421)
T ss_dssp EEEEECTTCSC----HHHHHHH-HHHHGGGCCSEEE----C------------CSCGGGGGGHHHHHTTC-CCCEEECTT
T ss_pred eEeccccccCC----HHHHHHH-HHHhhhhhhcccc----c------------CCcccchHHHHHHHhcC-CCCeecCcc
Confidence 66666555554 3454554 4556788888765 1 12233456667777654 899999999
Q ss_pred CCCHHHHHHHHH-cCcCeeEE
Q 017176 216 INTVDEVNAALR-KGAHHVMV 235 (376)
Q Consensus 216 I~s~~da~~~l~-~Gad~Vmi 235 (376)
+.+..++.++++ ..+|.|++
T Consensus 281 ~~~~~~~~~~i~~~a~d~v~~ 301 (421)
T 4hnl_A 281 FNNPMEWQELVKNRQIDFMRA 301 (421)
T ss_dssp CCSGGGTHHHHHTTCCSEECC
T ss_pred eehhHHHHHHHhcCCceEEEe
Confidence 999999999998 55888875
No 238
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.90 E-value=0.0022 Score=57.41 Aligned_cols=155 Identities=14% Similarity=0.107 Sum_probs=99.5
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCcc-----c---cCCCCccccccCCHHHHHHHHHHHhcc--
Q 017176 63 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPK-----V---AGHGCFGVSLMLDPKFVGEAMSVIAAN-- 132 (376)
Q Consensus 63 ~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~-----v---~r~g~yG~~l~~~~~~~~eiv~~v~~~-- 132 (376)
...|++.=|.+.++++....++.+.+.|++.||+.+-.|... . ...---|+.-.-+++.+.+.+++=.+.
T Consensus 11 ~~~~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fiv 90 (217)
T 3lab_A 11 NTKPLIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIV 90 (217)
T ss_dssp TSCSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEE
T ss_pred hhCCEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEE
Confidence 456788888999999999999999999999999987665310 0 000112333334566665555441110
Q ss_pred --------------cCc------cEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCc
Q 017176 133 --------------TNV------PVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPP 192 (376)
Q Consensus 133 --------------~~~------pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~ 192 (376)
.++ |+.- |. .+..|+.. +.++|+|.|-++..... .
T Consensus 91 sP~~~~evi~~~~~~~v~~~~~~~~~P----G~---~TptE~~~-----A~~~Gad~vK~FPa~~~-g------------ 145 (217)
T 3lab_A 91 SPGLTPELIEKAKQVKLDGQWQGVFLP----GV---ATASEVMI-----AAQAGITQLKCFPASAI-G------------ 145 (217)
T ss_dssp ESSCCHHHHHHHHHHHHHCSCCCEEEE----EE---CSHHHHHH-----HHHTTCCEEEETTTTTT-T------------
T ss_pred eCCCcHHHHHHHHHcCCCccCCCeEeC----CC---CCHHHHHH-----HHHcCCCEEEECccccc-c------------
Confidence 122 2222 11 12333322 23689999987753210 1
Q ss_pred ccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCch
Q 017176 193 LKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 193 ~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
..++++.++.-++++|++..|||+ ++.+.+.++.|+..+..| .++..|.+
T Consensus 146 -G~~~lkal~~p~p~i~~~ptGGI~-~~N~~~~l~aGa~~~vgG-s~l~~~~~ 195 (217)
T 3lab_A 146 -GAKLLKAWSGPFPDIQFCPTGGIS-KDNYKEYLGLPNVICAGG-SWLTESKL 195 (217)
T ss_dssp -HHHHHHHHHTTCTTCEEEEBSSCC-TTTHHHHHHSTTBCCEEE-SGGGCHHH
T ss_pred -CHHHHHHHHhhhcCceEEEeCCCC-HHHHHHHHHCCCEEEEEC-hhhcChhH
Confidence 156788888778899999999997 899999999999888665 45555554
No 239
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=96.87 E-value=0.032 Score=52.10 Aligned_cols=195 Identities=13% Similarity=0.056 Sum_probs=114.5
Q ss_pred CCChHHHHHHHHHhCCCcEEEecc--eeecccccccc---hhhhhhc-----cCCCCCCEEEEe---cCCCHHHHHHHHH
Q 017176 18 DWTDNHYRTLARLISKHAWLYTEM--LAAETIIYQQG---NLDRFLA-----FSPEQHPIVLQI---GGSNLDNLAKATE 84 (376)
Q Consensus 18 ~~td~~~r~~~~~~Gg~gl~~te~--v~~~~~~~~~~---~~~~~~~-----~~~~~~p~~vQL---~g~~~~~~~~aa~ 84 (376)
+.-|.....++.+.| +..+++.- ++.. +.+.+. ....++. ....+.|+++-+ +| +++...+.++
T Consensus 21 ~a~D~~sA~~~~~aG-~~ai~vs~~~~a~~-~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg-~~~~~~~~v~ 97 (290)
T 2hjp_A 21 AAHNPLVAKLAEQAG-FGGIWGSGFELSAS-YAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFG-NAVNVHYVVP 97 (290)
T ss_dssp ECSSHHHHHHHHHHT-CSEEEECHHHHHHH-TTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTS-SHHHHHHHHH
T ss_pred cCCCHHHHHHHHHcC-CCEEEEChHHHHHh-CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC-CHHHHHHHHH
Confidence 666888888887776 78887763 2222 322221 1111111 123457777665 35 8888999999
Q ss_pred HHHHCCCCEEEecCCCCCccccCCCCcc--ccccCCHHHHHHHHHHHhccc---CccEEEEecCCCCCCccHHHHHHHHH
Q 017176 85 LANAYNYDEINLNCGCPSPKVAGHGCFG--VSLMLDPKFVGEAMSVIAANT---NVPVSVKCRIGVDDHDSYNQLCDFIY 159 (376)
Q Consensus 85 ~~~~~G~d~IeiN~gcP~~~v~r~g~yG--~~l~~~~~~~~eiv~~v~~~~---~~pv~vKiR~g~~~~~~~~~~~~~i~ 159 (376)
++.++|+++|.|--+... ++ .|+.| +.-+-..+...+-|++++++. ++-|..|+-.-+. ...++++++. +
T Consensus 98 ~l~~aGa~gv~iED~~~~-k~--cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a-~~g~~~ai~R-a 172 (290)
T 2hjp_A 98 QYEAAGASAIVMEDKTFP-KD--TSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIA-GLGQQEAVRR-G 172 (290)
T ss_dssp HHHHHTCSEEEEECBCSS-CC--C-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTT-TCCHHHHHHH-H
T ss_pred HHHHhCCeEEEEcCCCCC-cc--ccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhc-cccHHHHHHH-H
Confidence 998999999999876532 22 34444 333444555555555555542 3344444322111 1235666665 3
Q ss_pred HHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCC--CeEEEec---CCCCHHHHHHHHHcC-cCee
Q 017176 160 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPD--LTFTLNG---GINTVDEVNAALRKG-AHHV 233 (376)
Q Consensus 160 ~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~--ipVi~nG---gI~s~~da~~~l~~G-ad~V 233 (376)
+.++++|+|.|.++++... .+.+.++.+++ + +|+++|- ...+ ..++-+.| +..|
T Consensus 173 ~ay~eAGAd~i~~e~~~~~----------------~~~~~~i~~~~-~~~vP~i~n~~~~~~~~---~~eL~~lG~v~~v 232 (290)
T 2hjp_A 173 QAYEEAGADAILIHSRQKT----------------PDEILAFVKSW-PGKVPLVLVPTAYPQLT---EADIAALSKVGIV 232 (290)
T ss_dssp HHHHHTTCSEEEECCCCSS----------------SHHHHHHHHHC-CCSSCEEECGGGCTTSC---HHHHHTCTTEEEE
T ss_pred HHHHHcCCcEEEeCCCCCC----------------HHHHHHHHHHc-CCCCCEEEeccCCCCCC---HHHHHhcCCeeEE
Confidence 4667899999999985320 24456777766 5 9999872 2333 34455579 9999
Q ss_pred EEchHHh
Q 017176 234 MVGRAAY 240 (376)
Q Consensus 234 miGRa~l 240 (376)
.+|-.++
T Consensus 233 ~~~~~~~ 239 (290)
T 2hjp_A 233 IYGNHAI 239 (290)
T ss_dssp EECSHHH
T ss_pred EechHHH
Confidence 9987765
No 240
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=96.86 E-value=0.0054 Score=55.31 Aligned_cols=49 Identities=18% Similarity=0.246 Sum_probs=41.3
Q ss_pred HHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcCeeEEchHHhhCCch
Q 017176 195 YEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 195 ~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad~VmiGRa~l~~P~l 245 (376)
.++++++...++++||++.||| +++.+.+.++ .|+++|. |+++...+++
T Consensus 154 ~~~lk~i~~~~~~ipvvaiGGI-~~~N~~~~l~~~Ga~~v~-gSai~~~~~i 203 (225)
T 1mxs_A 154 VAAIKAFGGPFGDIRFCPTGGV-NPANVRNYMALPNVMCVG-TTWMLDSSWI 203 (225)
T ss_dssp HHHHHHHHTTTTTCEEEEBSSC-CTTTHHHHHHSTTBCCEE-ECTTSCHHHH
T ss_pred HHHHHHHHhhCCCCeEEEECCC-CHHHHHHHHhccCCEEEE-EchhcCchhh
Confidence 4667777777779999999999 6789999999 8999999 9988766654
No 241
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=96.85 E-value=0.033 Score=53.74 Aligned_cols=131 Identities=13% Similarity=0.139 Sum_probs=91.8
Q ss_pred EEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCC
Q 017176 67 IVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGV 145 (376)
Q Consensus 67 ~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~ 145 (376)
+...+...+++.+.+.++.+.+.||..+-+..|.. +++.-.+.+++||+.+ +.++.+-..-+|
T Consensus 135 ~~~~~~~~~~e~~~~~a~~~~~~G~~~iK~Kvg~~----------------~~~~d~~~v~avr~~~~~~~l~vDaN~~~ 198 (365)
T 3ik4_A 135 TDMTITAGDEVHAAASAKAILARGIKSIKVKTAGV----------------DVAYDLARLRAIHQAAPTAPLIVDGNCGY 198 (365)
T ss_dssp BCEEECCSCHHHHHHHHHHHHHTTCCCEEEECCSS----------------CHHHHHHHHHHHHHHSSSCCEEEECTTCC
T ss_pred eeEEecCCCHHHHHHHHHHHHHcCCCEEEEEeCCC----------------CHHHHHHHHHHHHHhCCCCeEEEECCCCC
Confidence 33455567899999998888888999998865421 3566677888888876 345555555555
Q ss_pred CCCccHHHHHHHHHHHh--hcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHH
Q 017176 146 DDHDSYNQLCDFIYKVS--SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVN 223 (376)
Q Consensus 146 ~~~~~~~~~~~~i~~~~--e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~ 223 (376)
+ .++.++++ +.+ ++.++.+|. . .+++-+++.++++.+.. ++||.+.-.+.+.+++.
T Consensus 199 ~----~~~A~~~~-~~L~~~~~~i~~iE----e------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~ 256 (365)
T 3ik4_A 199 D----VERALAFC-AACKAESIPMVLFE----Q------------PLPREDWAGMAQVTAQS-GFAVAADESARSAHDVL 256 (365)
T ss_dssp C----HHHHHHHH-HHHHHTTCCEEEEE----C------------CSCTTCHHHHHHHHHHS-SSCEEESTTCSSHHHHH
T ss_pred C----HHHHHHHH-HHHhhCCCCceEEE----C------------CCCcccHHHHHHHHhhC-CCCEEECCCCCCHHHHH
Confidence 4 34444443 345 566777665 1 12223477777887765 89999999999999999
Q ss_pred HHHH-cCcCeeEE
Q 017176 224 AALR-KGAHHVMV 235 (376)
Q Consensus 224 ~~l~-~Gad~Vmi 235 (376)
++++ ..+|.|++
T Consensus 257 ~~i~~~a~d~v~i 269 (365)
T 3ik4_A 257 RIAREGTASVINI 269 (365)
T ss_dssp HHHHHTCCSEEEE
T ss_pred HHHHhCCCCEEEE
Confidence 9998 66899887
No 242
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=96.84 E-value=0.0074 Score=56.63 Aligned_cols=109 Identities=13% Similarity=0.122 Sum_probs=70.5
Q ss_pred cCCCCccccccC--CHHH---HHHHHHHHhcccCc-cEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCcccc
Q 017176 106 AGHGCFGVSLML--DPKF---VGEAMSVIAANTNV-PVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALL 179 (376)
Q Consensus 106 ~r~g~yG~~l~~--~~~~---~~eiv~~v~~~~~~-pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~ 179 (376)
+|.+.+...+.+ +... +.+-++++++..+. ++.|-+ ++++++.+. .++|+|+|-++..+
T Consensus 174 hr~~l~d~vlikdnhi~~~Gti~~ai~~~r~~~~~~kI~vev-------~tlee~~eA-----~~aGaD~I~ld~~~--- 238 (296)
T 1qap_A 174 HRLGLTDAFLIKENHIIASGSVRQAVEKAFWLHPDVPVEVEV-------ENLDELDDA-----LKAGADIIMLDNFN--- 238 (296)
T ss_dssp CCSSSSSCEEECHHHHHHHSSHHHHHHHHHHHSTTSCEEEEE-------SSHHHHHHH-----HHTTCSEEEESSCC---
T ss_pred hccccccEEEEEcCCeeccCCHHHHHHHHHHhCCCCcEEEEe-------CCHHHHHHH-----HHcCCCEEEECCCC---
Confidence 344444444544 3344 35556666665532 444422 334454332 25899999987522
Q ss_pred CCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCch
Q 017176 180 NGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 180 ~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
.+.+.++++.. .+++|.++||| |.+.+.++.++|+|++.+|+....-|++
T Consensus 239 ---------------~e~l~~~v~~~~~~~~I~ASGGI-t~~~i~~~a~~GvD~isvGsli~~a~~~ 289 (296)
T 1qap_A 239 ---------------TDQMREAVKRVNGQARLEVSGNV-TAETLREFAETGVDFISVGALTKHVRAL 289 (296)
T ss_dssp ---------------HHHHHHHHHTTCTTCCEEECCCS-CHHHHHHHHHTTCSEEECSHHHHEEECC
T ss_pred ---------------HHHHHHHHHHhCCCCeEEEECCC-CHHHHHHHHHcCCCEEEEeHHHcCCCCC
Confidence 34555555543 26999999999 9999999999999999999976656654
No 243
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=96.82 E-value=0.0022 Score=57.37 Aligned_cols=140 Identities=16% Similarity=0.125 Sum_probs=81.6
Q ss_pred CCCEEE--EecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 64 QHPIVL--QIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 64 ~~p~~v--QL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
+.|+++ -+. ..|+.+. +.+.++|+|+|-+|...+ .+.+.++++.+++. +.+..+.
T Consensus 59 ~~~i~ld~~l~-d~p~~~~---~~~~~aGad~i~vh~~~~-----------------~~~~~~~~~~~~~~-g~~~~~d- 115 (218)
T 3jr2_A 59 NHILVCDMKTT-DGGAILS---RMAFEAGADWITVSAAAH-----------------IATIAACKKVADEL-NGEIQIE- 115 (218)
T ss_dssp TSEEEEEEEEC-SCHHHHH---HHHHHHTCSEEEEETTSC-----------------HHHHHHHHHHHHHH-TCEEEEE-
T ss_pred CCcEEEEEeec-ccHHHHH---HHHHhcCCCEEEEecCCC-----------------HHHHHHHHHHHHHh-CCcccee-
Confidence 345543 343 4466544 566778999999985321 12345666666543 4443331
Q ss_pred cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCc-cccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHH
Q 017176 142 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK-ALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVD 220 (376)
Q Consensus 142 R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~-~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~ 220 (376)
-++.. +.++..+ + .+.|+|++.++... ....|.. ..+..++.++++.. +++||++.||| +++
T Consensus 116 ~l~~~---T~~~~~~----~-~~~g~d~v~~~~~~~~~~~g~~------~~~~~l~~i~~~~~--~~~pi~v~GGI-~~~ 178 (218)
T 3jr2_A 116 IYGNW---TMQDAKA----W-VDLGITQAIYHRSRDAELAGIG------WTTDDLDKMRQLSA--LGIELSITGGI-VPE 178 (218)
T ss_dssp CCSSC---CHHHHHH----H-HHTTCCEEEEECCHHHHHHTCC------SCHHHHHHHHHHHH--TTCEEEEESSC-CGG
T ss_pred eeecC---CHHHHHH----H-HHcCccceeeeeccccccCCCc------CCHHHHHHHHHHhC--CCCCEEEECCC-CHH
Confidence 23332 2233322 2 24699998775332 2111210 01112344545443 48999999999 699
Q ss_pred HHHHHHHcCcCeeEEchHHhhCC
Q 017176 221 EVNAALRKGAHHVMVGRAAYQNP 243 (376)
Q Consensus 221 da~~~l~~Gad~VmiGRa~l~~P 243 (376)
.+.++++.|||+|.+||++...+
T Consensus 179 ~~~~~~~aGAd~vvvGsaI~~a~ 201 (218)
T 3jr2_A 179 DIYLFEGIKTKTFIAGRALAGAE 201 (218)
T ss_dssp GGGGGTTSCEEEEEESGGGSHHH
T ss_pred HHHHHHHcCCCEEEEchhhcCCC
Confidence 99999999999999999987543
No 244
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=96.74 E-value=0.018 Score=54.12 Aligned_cols=200 Identities=14% Similarity=0.102 Sum_probs=111.9
Q ss_pred CCChHHHHHHHHHhCCCcEEEe-cceeecc-cccccc---hhhhhh----ccC--CCCCCEEEEe---cCCCHHHHHHHH
Q 017176 18 DWTDNHYRTLARLISKHAWLYT-EMLAAET-IIYQQG---NLDRFL----AFS--PEQHPIVLQI---GGSNLDNLAKAT 83 (376)
Q Consensus 18 ~~td~~~r~~~~~~Gg~gl~~t-e~v~~~~-~~~~~~---~~~~~~----~~~--~~~~p~~vQL---~g~~~~~~~~aa 83 (376)
+.-|....+++.+.| +..+++ ....+.. +...+. ....++ .+. ..+.|+++-+ +| +++...+.+
T Consensus 24 ~a~D~~sA~l~e~aG-f~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg-~~~~v~~tv 101 (302)
T 3fa4_A 24 GVYDGLSARVALSAG-FDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADADTGYG-GPIMVARTT 101 (302)
T ss_dssp EECSHHHHHHHHTTT-CSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTS-SHHHHHHHH
T ss_pred cCcCHHHHHHHHHcC-CCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCCCCC-CHHHHHHHH
Confidence 566888888877776 676665 4222111 222211 011111 111 1367888776 34 588888999
Q ss_pred HHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc---CccEEEEecCCCCCCccHHHHHHHHHH
Q 017176 84 ELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT---NVPVSVKCRIGVDDHDSYNQLCDFIYK 160 (376)
Q Consensus 84 ~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~---~~pv~vKiR~g~~~~~~~~~~~~~i~~ 160 (376)
+.+.++|+.+|.|--.... | |.|+.++.-+-..+...+=|++.+++. +.++.|=-|...-....+++.++.+ +
T Consensus 102 ~~l~~aGaagv~iEDq~~~-K--rcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra-~ 177 (302)
T 3fa4_A 102 EQYSRSGVAAFHIEDQVQT-K--RCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEESVARL-R 177 (302)
T ss_dssp HHHHHTTCCEEEECSBCCC----------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHHHHHH-H
T ss_pred HHHHHcCCcEEEECCCCCC-c--ccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHHHHHH-H
Confidence 9999999999999765432 2 223333333334554444455554432 4555555555211112356666653 4
Q ss_pred HhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEe---cCCCCHHHHHHHHHcCcCeeEEch
Q 017176 161 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN---GGINTVDEVNAALRKGAHHVMVGR 237 (376)
Q Consensus 161 ~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~n---GgI~s~~da~~~l~~Gad~VmiGR 237 (376)
.+.++|+|.|-+++-+. .+.+.++.+.+.++|+.+| |+-...-+..++-+.|+..|..+-
T Consensus 178 ay~eAGAD~ifi~g~~~-----------------~~ei~~~~~~~~~~Pl~~n~~~~g~~p~~~~~eL~~lGv~~v~~~~ 240 (302)
T 3fa4_A 178 AARDAGADVGFLEGITS-----------------REMARQVIQDLAGWPLLLNMVEHGATPSISAAEAKEMGFRIIIFPF 240 (302)
T ss_dssp HHHTTTCSEEEETTCCC-----------------HHHHHHHHHHTTTSCEEEECCTTSSSCCCCHHHHHHHTCSEEEETT
T ss_pred HHHHcCCCEEeecCCCC-----------------HHHHHHHHHHhcCCceeEEEecCCCCCCCCHHHHHHcCCCEEEEch
Confidence 55689999999998431 4556777777656888776 332111123444456999998876
Q ss_pred HHh
Q 017176 238 AAY 240 (376)
Q Consensus 238 a~l 240 (376)
.++
T Consensus 241 ~~~ 243 (302)
T 3fa4_A 241 AAL 243 (302)
T ss_dssp TTH
T ss_pred HHH
Confidence 654
No 245
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=96.73 E-value=0.013 Score=53.23 Aligned_cols=134 Identities=10% Similarity=0.058 Sum_probs=83.2
Q ss_pred EEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--------CccEEE
Q 017176 68 VLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--------NVPVSV 139 (376)
Q Consensus 68 ~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--------~~pv~v 139 (376)
-+-|..++|+.|.+. +.++|+|+|-+|..... + +.++++.+++.. +..+.+
T Consensus 73 DvhLMv~~p~~~i~~---~~~aGAd~itvH~ea~~---------------~---~~~~i~~i~~~~~~~~~~~~g~~~gv 131 (237)
T 3cu2_A 73 DVHLMVRNQLEVAKA---VVANGANLVTLQLEQYH---------------D---FALTIEWLAKQKTTYANQVYPVLIGA 131 (237)
T ss_dssp EEEEECSCHHHHHHH---HHHTTCSEEEEETTCTT---------------S---HHHHHHHHTTCEEEETTEEEECEEEE
T ss_pred CeEEEEECHHHHHHH---HHHcCCCEEEEecCCcc---------------c---HHHHHHHHHhcccccccccCCceEEE
Confidence 677778899766554 45789999999864321 1 345667776541 334444
Q ss_pred EecCCCCCCccHHHHHHHHHHHhhcCCccEEEE---ccCccccCCCCCCCCCCCCcccHHHHHHHHhhC----CCCeEEE
Q 017176 140 KCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII---HSRKALLNGISPAENRTIPPLKYEYYYALLRDF----PDLTFTL 212 (376)
Q Consensus 140 KiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~v---h~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~----~~ipVi~ 212 (376)
-+.++... +.+ ..++ .++|+|.+ |++...+. ..+...+.++++++.. .++||.+
T Consensus 132 ~l~p~Tp~-~~l-------~~~l--~~~D~vlvMsv~pgfggq~---------f~~~~l~ki~~lr~~~~~~~~~~~I~v 192 (237)
T 3cu2_A 132 CLCPETPI-SEL-------EPYL--DQIDVIQLLTLDPRNGTKY---------PSELILDRVIQVEKRLGNRRVEKLINI 192 (237)
T ss_dssp EECTTSCG-GGG-------TTTT--TTCSEEEEESEETTTTEEC---------CHHHHHHHHHHHHHHHGGGGGGCEEEE
T ss_pred EEeCCChH-HHH-------HHHh--hcCceeeeeeeccCcCCee---------cChhHHHHHHHHHHHHHhcCCCceEEE
Confidence 44332211 111 1122 47998854 66543221 1122244444444332 2589999
Q ss_pred ecCCCCHHHHHHHHH--cCcCeeEEchHHhhC
Q 017176 213 NGGINTVDEVNAALR--KGAHHVMVGRAAYQN 242 (376)
Q Consensus 213 nGgI~s~~da~~~l~--~Gad~VmiGRa~l~~ 242 (376)
.|||+ .+.+.++.+ .|||++.+|++++..
T Consensus 193 dGGI~-~~~~~~~~~~~aGad~~VvGSaIf~~ 223 (237)
T 3cu2_A 193 DGSMT-LELAKYFKQGTHQIDWLVSGSALFSG 223 (237)
T ss_dssp ESSCC-HHHHHHHHHSSSCCCCEEECGGGGSS
T ss_pred ECCcC-HHHHHHHHHhCCCCcEEEEeeHHhCC
Confidence 99995 899999999 999999999999874
No 246
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=96.71 E-value=0.031 Score=52.36 Aligned_cols=202 Identities=9% Similarity=0.036 Sum_probs=109.8
Q ss_pred CCChHHHHHHHHHhCCCcEEEecce-eecccccccc---hhhhhhc-----cCCCCCCEEEEe---cCCCHHHHHHHHHH
Q 017176 18 DWTDNHYRTLARLISKHAWLYTEML-AAETIIYQQG---NLDRFLA-----FSPEQHPIVLQI---GGSNLDNLAKATEL 85 (376)
Q Consensus 18 ~~td~~~r~~~~~~Gg~gl~~te~v-~~~~~~~~~~---~~~~~~~-----~~~~~~p~~vQL---~g~~~~~~~~aa~~ 85 (376)
+.-|....+++.+.| +..+++.-. .+..+...+. ....++. ....+.|+++-+ +| +++...+.+++
T Consensus 25 ~a~D~~sA~~~~~aG-~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg-~~~~v~~~v~~ 102 (295)
T 1s2w_A 25 EAHNGLSARIVQEAG-FKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDADTGYG-NFNNARRLVRK 102 (295)
T ss_dssp EECSHHHHHHHHHHT-CSCEEECCHHHHHTC---------CHHHHHHHHHHHHTCSSCEEEECCSSCS-SHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHcC-CCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEecCCCCCC-CHHHHHHHHHH
Confidence 566888888877776 777776622 1112222211 0111110 112356777765 34 57788888898
Q ss_pred HHHCCCCEEEecCCCCCccccCCCCccc--cccCCHHHHHHHHHHHhccc-CccEEEEecCCCC-CCccHHHHHHHHHHH
Q 017176 86 ANAYNYDEINLNCGCPSPKVAGHGCFGV--SLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVD-DHDSYNQLCDFIYKV 161 (376)
Q Consensus 86 ~~~~G~d~IeiN~gcP~~~v~r~g~yG~--~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~-~~~~~~~~~~~i~~~ 161 (376)
+.++|+.+|.|--+... +++ |+.|+ .-+-..+...+-|++++++. +.++.|--|..-. ....++++++. ++.
T Consensus 103 l~~aGaagv~iED~~~~-k~c--gH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~R-a~a 178 (295)
T 1s2w_A 103 LEDRGVAGACLEDKLFP-KTN--SLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLDEALKR-AEA 178 (295)
T ss_dssp HHHTTCCEEEEECBCC-----------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHHHHHHH-HHH
T ss_pred HHHcCCcEEEECCCCCC-ccc--cccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHHHHHHH-HHH
Confidence 88999999999876542 223 34442 22334444445555555432 3344444443211 11225666665 345
Q ss_pred hhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCC-CCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHh
Q 017176 162 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAY 240 (376)
Q Consensus 162 ~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l 240 (376)
++++|+|.|.++++... .+.+.++.+++. .+|+++|-.-+..-++.++-+.|+..|.+|-.++
T Consensus 179 y~eAGAd~i~~e~~~~~----------------~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~eL~~lGv~~v~~~~~~~ 242 (295)
T 1s2w_A 179 YRNAGADAILMHSKKAD----------------PSDIEAFMKAWNNQGPVVIVPTKYYKTPTDHFRDMGVSMVIWANHNL 242 (295)
T ss_dssp HHHTTCSEEEECCCSSS----------------SHHHHHHHHHHTTCSCEEECCSTTTTSCHHHHHHHTCCEEEECSHHH
T ss_pred HHHcCCCEEEEcCCCCC----------------HHHHHHHHHHcCCCCCEEEeCCCCCCCCHHHHHHcCCcEEEEChHHH
Confidence 67899999999864210 234455665542 3999998432111125555568999999987765
Q ss_pred h
Q 017176 241 Q 241 (376)
Q Consensus 241 ~ 241 (376)
.
T Consensus 243 r 243 (295)
T 1s2w_A 243 R 243 (295)
T ss_dssp H
T ss_pred H
Confidence 3
No 247
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=96.70 E-value=0.014 Score=57.33 Aligned_cols=130 Identities=10% Similarity=-0.073 Sum_probs=86.2
Q ss_pred HHHHHHHHHCCCCEEEecCCCCCccccCCCCccccc-cCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHHHHHH
Q 017176 80 AKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSL-MLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCD 156 (376)
Q Consensus 80 ~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l-~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~~~~~ 156 (376)
.+.++.+.+.||..+-++...+.. .+. |... ..+++...+.+++||+.+ ++++.|...-+|+ .++.++
T Consensus 161 ~~~a~~~~~~G~~~~K~~~~~~~~--~K~---G~~~~~~~~~~d~e~v~avR~a~g~d~~l~vDaN~~~~----~~~A~~ 231 (410)
T 3dip_A 161 GVLAESLVAEGYAAMKIWPFDDFA--SIT---PHHISLTDLKDGLEPFRKIRAAVGQRIEIMCELHSLWG----THAAAR 231 (410)
T ss_dssp HHHHHHHHHTTCSEEEECTTHHHH--TTC---TTCCCHHHHHHHHHHHHHHHHHHTTSSEEEEECTTCBC----HHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCccCcc--ccc---cCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCC----HHHHHH
Confidence 344556667899999996211110 011 2111 023567788999999987 4678777666665 345554
Q ss_pred HHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcCeeEE
Q 017176 157 FIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 235 (376)
Q Consensus 157 ~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad~Vmi 235 (376)
+ .+.+++.|+++|.-- . +++.+++..+++++.. ++||.+.+.+.+++++.++++ ..+|.|++
T Consensus 232 ~-~~~L~~~~i~~iEqP----~-----------~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~ 294 (410)
T 3dip_A 232 I-CNALADYGVLWVEDP----I-----------AKMDNIPAVADLRRQT-RAPICGGENLAGTRRFHEMLCADAIDFVML 294 (410)
T ss_dssp H-HHHGGGGTCSEEECC----B-----------SCTTCHHHHHHHHHHH-CCCEEECTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred H-HHHHHhcCCCEEECC----C-----------CCcccHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHHcCCCCeEee
Confidence 4 456678899888610 0 1222366667777664 899999999999999999998 56899987
No 248
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=96.65 E-value=0.017 Score=53.61 Aligned_cols=132 Identities=10% Similarity=0.017 Sum_probs=79.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCcccccc---CCHHHHHHHHHHHhcccCccEEEEecCCCCCCccH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLM---LDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~---~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~ 151 (376)
..+.-+.-++.+.+.|+|.||+=+ .||.-+. .+.+.+.+-+++|++.++ +..+|+-+-.....+.
T Consensus 98 ~~e~K~~Ea~~Av~~GAdEIDmVi-----------nig~lk~~~~g~~~~V~~eI~~v~~a~~-~~~lKVIlEt~~Lt~~ 165 (297)
T 4eiv_A 98 TPDTVSLEAVGALKDGADEIECLI-----------DWRRMNENVADGESRIRLLVSEVKKVVG-PKTLKVVLSGGELQGG 165 (297)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC-----------CTHHHHHCHHHHHHHHHHHHHHHHHHHT-TSEEEEECCSSCCCCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeee-----------eHHHHhcccCCcHHHHHHHHHHHHHHhc-CCceEEEEecccCCcH
Confidence 344444445567778999999832 1355455 567888888888888774 4567766633222222
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhh--------------------CCCCeEE
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD--------------------FPDLTFT 211 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~--------------------~~~ipVi 211 (376)
+.+....+++.++|+|+|--+.+... .| +. +-+...+.+.+++ -.++-|=
T Consensus 166 -e~i~~A~~ia~~AGADFVKTSTGf~~-~g---AT-----~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgvK 235 (297)
T 4eiv_A 166 -DIISRAAVAALEGGADFLQTSSGLGA-TH---AT-----MFTVHLISIALREYMVRENERIRVEGINREGAAVRCIGIK 235 (297)
T ss_dssp -HHHHHHHHHHHHHTCSEEECCCSSSS-CC---CC-----HHHHHHHHHHHHHHHCC------------------CCEEE
T ss_pred -HHHHHHHHHHHHhCCCEEEcCCCCCC-CC---CC-----HHHHHHHHHHHHHHhccccccccccccccccccCCceeEE
Confidence 32222345566899999986654311 11 11 1112333344421 1468898
Q ss_pred Ee-cCCCCHHHHHHHHHc
Q 017176 212 LN-GGINTVDEVNAALRK 228 (376)
Q Consensus 212 ~n-GgI~s~~da~~~l~~ 228 (376)
++ |||+|.+|+.++++.
T Consensus 236 As~GGIrt~e~A~~~i~~ 253 (297)
T 4eiv_A 236 IEVGDVHMAETADFLMQM 253 (297)
T ss_dssp EECTTCCHHHHHHHHHHH
T ss_pred ecCCCCCCHHHHHHHHHH
Confidence 99 999999999999984
No 249
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=96.60 E-value=0.011 Score=52.72 Aligned_cols=131 Identities=15% Similarity=0.106 Sum_probs=78.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHH
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQ 153 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~ 153 (376)
..|+.+.+ .+.++|+|.|.+|... | .+-+.++++.+++ .+.++.+++--++. ....
T Consensus 67 dip~t~~~---~~~~~Gad~itvh~~~-----------g------~~~l~~~~~~~~~-~g~~~~~~ll~~~t-~~~~-- 122 (216)
T 1q6o_A 67 DAGKILSR---MCFEANADWVTVICCA-----------D------INTAKGALDVAKE-FNGDVQIELTGYWT-WEQA-- 122 (216)
T ss_dssp SCHHHHHH---HHHHTTCSEEEEETTS-----------C------HHHHHHHHHHHHH-TTCEEEEEECSCCC-HHHH--
T ss_pred ccHHHHHH---HHHhCCCCEEEEeccC-----------C------HHHHHHHHHHHHH-cCCCceeeeeeCCC-hhhH--
Confidence 45777755 5667999999998521 1 1234556666665 36666555431333 1111
Q ss_pred HHHHHHHHhhcCCccEEEEccCc-cccCCCCCCCCCCCCcccHHHHHHHHhhCC-CCeEEEecCCCCHHHHHHHHHcCcC
Q 017176 154 LCDFIYKVSSLSPTRHFIIHSRK-ALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAH 231 (376)
Q Consensus 154 ~~~~i~~~~e~~Gvd~I~vh~r~-~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi~nGgI~s~~da~~~l~~Gad 231 (376)
+ .+++.|.+.+.+|-.. ....|..+ ..+.+..+++... ++||++.|||+ ++.+.++++.|||
T Consensus 123 --~----~l~~~~~~~~vl~~a~~~~~~G~~g---------~~~~i~~lr~~~~~~~~i~v~GGI~-~~~~~~~~~aGad 186 (216)
T 1q6o_A 123 --Q----QWRDAGIGQVVYHRSRDAQAAGVAW---------GEADITAIKRLSDMGFKVTVTGGLA-LEDLPLFKGIPIH 186 (216)
T ss_dssp --H----HHHHTTCCEEEEECCHHHHHTTCCC---------CHHHHHHHHHHHHTTCEEEEESSCC-GGGGGGGTTSCCS
T ss_pred --H----HHHhcCcHHHHHHHHHHHHhcCCCC---------CHHHHHHHHHhcCCCCcEEEECCcC-hhhHHHHHHcCCC
Confidence 1 1234577777776422 11123221 1233334333222 68899999997 7888888889999
Q ss_pred eeEEchHHhhCCc
Q 017176 232 HVMVGRAAYQNPW 244 (376)
Q Consensus 232 ~VmiGRa~l~~P~ 244 (376)
++.+||++...+.
T Consensus 187 ~ivvG~~I~~a~d 199 (216)
T 1q6o_A 187 VFIAGRSIRDAAS 199 (216)
T ss_dssp EEEESHHHHTSSC
T ss_pred EEEEeehhcCCCC
Confidence 9999999987654
No 250
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=96.54 E-value=0.058 Score=49.98 Aligned_cols=189 Identities=15% Similarity=0.088 Sum_probs=118.6
Q ss_pred CCCChHHHHHHHHHhCCCcEEEecc--eeecccccccc---hhh-------hhhccCCCCCCEEEEe---cCCCHHHHHH
Q 017176 17 MDWTDNHYRTLARLISKHAWLYTEM--LAAETIIYQQG---NLD-------RFLAFSPEQHPIVLQI---GGSNLDNLAK 81 (376)
Q Consensus 17 ~~~td~~~r~~~~~~Gg~gl~~te~--v~~~~~~~~~~---~~~-------~~~~~~~~~~p~~vQL---~g~~~~~~~~ 81 (376)
.+.-|....+++.+.| +..+++.- ++ ..+.+.+. ... .+.+. .+.|+++-+ ||.+++...+
T Consensus 21 ~~a~D~~sA~~~~~aG-~~ai~vsg~s~a-~~~G~pD~~~vt~~em~~~~~~I~~~--~~~pviaD~d~Gyg~~~~~~~~ 96 (275)
T 2ze3_A 21 PNAWDVASARLLEAAG-FTAIGTTSAGIA-HARGRTDGQTLTRDEMGREVEAIVRA--VAIPVNADIEAGYGHAPEDVRR 96 (275)
T ss_dssp CEESSHHHHHHHHHHT-CSCEEECHHHHH-HHSCCCSSSSSCHHHHHHHHHHHHHH--CSSCEEEECTTCSSSSHHHHHH
T ss_pred ecccCHHHHHHHHHcC-CCEEEECcHHHH-HhCCCCCCCCCCHHHHHHHHHHHHhh--cCCCEEeecCCCCCCCHHHHHH
Confidence 3666888888887776 77777663 22 12222221 011 11111 236787765 4568999999
Q ss_pred HHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc---CccEEEEecCCCCCC-------ccH
Q 017176 82 ATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT---NVPVSVKCRIGVDDH-------DSY 151 (376)
Q Consensus 82 aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~---~~pv~vKiR~g~~~~-------~~~ 151 (376)
.++++.++|+.+|.|--+... . |.. +-..+...+-|++++++. ++|+.|--|..-.-. +.+
T Consensus 97 ~v~~l~~aGaagv~iED~~~~-------~-~k~-l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~ 167 (275)
T 2ze3_A 97 TVEHFAALGVAGVNLEDATGL-------T-PTE-LYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERL 167 (275)
T ss_dssp HHHHHHHTTCSEEEEECBCSS-------S-SSC-BCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHH
T ss_pred HHHHHHHcCCcEEEECCCcCC-------C-CCc-cCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhH
Confidence 999999999999999765421 1 222 345666777777776652 677777767532100 135
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEec--CCCCHHHHHHHHHcC
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG--GINTVDEVNAALRKG 229 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nG--gI~s~~da~~~l~~G 229 (376)
+++++. ++.++++|+|.|.+++... .+.+.++.+++ ++|+-.+. +..+. .++-+.|
T Consensus 168 ~~ai~R-a~ay~eAGAd~i~~e~~~~-----------------~~~~~~i~~~~-~~P~n~~~~~~~~~~---~eL~~lG 225 (275)
T 2ze3_A 168 AETVRR-GQAYADAGADGIFVPLALQ-----------------SQDIRALADAL-RVPLNVMAFPGSPVP---RALLDAG 225 (275)
T ss_dssp HHHHHH-HHHHHHTTCSEEECTTCCC-----------------HHHHHHHHHHC-SSCEEEECCTTSCCH---HHHHHTT
T ss_pred HHHHHH-HHHHHHCCCCEEEECCCCC-----------------HHHHHHHHHhc-CCCEEEecCCCCCCH---HHHHHcC
Confidence 666665 3466789999999987421 45567777776 78986664 34443 4555579
Q ss_pred cCeeEEchHHh
Q 017176 230 AHHVMVGRAAY 240 (376)
Q Consensus 230 ad~VmiGRa~l 240 (376)
+..|.+|-.++
T Consensus 226 v~~v~~~~~~~ 236 (275)
T 2ze3_A 226 AARVSFGQSLM 236 (275)
T ss_dssp CSEEECTTHHH
T ss_pred CcEEEEChHHH
Confidence 99998876654
No 251
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=96.54 E-value=0.0019 Score=56.59 Aligned_cols=47 Identities=19% Similarity=0.239 Sum_probs=41.2
Q ss_pred HHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCC
Q 017176 196 EYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 243 (376)
Q Consensus 196 ~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P 243 (376)
+.+.++.+.. ++|||+.|.|+|.+|+.++++.|||+|..++..|.+.
T Consensus 140 ~iI~~i~~~~-~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~LW~~ 186 (192)
T 3kts_A 140 EQVQKMTQKL-HIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWEG 186 (192)
T ss_dssp HHHHHHHHHH-CCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGGGTT
T ss_pred HHHHHHHHhc-CCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHHhCc
Confidence 5667777664 9999999999999999999999999999998887664
No 252
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.53 E-value=0.0044 Score=63.31 Aligned_cols=78 Identities=14% Similarity=0.146 Sum_probs=55.4
Q ss_pred HHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCH-----------HHHHHHH
Q 017176 158 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV-----------DEVNAAL 226 (376)
Q Consensus 158 i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~-----------~da~~~l 226 (376)
+++.+++.|++.|++---+....+. ...+...+.++++.++. .+||++.|||++. +++.+++
T Consensus 285 ~A~~~~~~Ga~~l~~~dl~~~~~~~------~~~~~~~~~i~~i~~~~-~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l 357 (555)
T 1jvn_A 285 LAQKYYQQGADEVTFLNITSFRDCP------LKDTPMLEVLKQAAKTV-FVPLTVGGGIKDIVDVDGTKIPALEVASLYF 357 (555)
T ss_dssp HHHHHHHTTCSEEEEEEEC---CCC------GGGCHHHHHHHHHTTTC-CSCEEEESSCSCEECTTCCEECHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEeCCcccccc------CCCchHHHHHHHHHhhC-CCcEEEeCccccchhcccccchHHHHHHHHH
Confidence 3556677899999875322211110 01112366777777664 8999999999998 5599999
Q ss_pred HcCcCeeEEchHHhhC
Q 017176 227 RKGAHHVMVGRAAYQN 242 (376)
Q Consensus 227 ~~Gad~VmiGRa~l~~ 242 (376)
+.|||.|.||++++.|
T Consensus 358 ~aGad~V~igt~~~~~ 373 (555)
T 1jvn_A 358 RSGADKVSIGTDAVYA 373 (555)
T ss_dssp HHTCSEEEECHHHHHH
T ss_pred HcCCCEEEECCHHhhC
Confidence 9999999999999884
No 253
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=96.50 E-value=0.057 Score=54.83 Aligned_cols=77 Identities=12% Similarity=-0.003 Sum_probs=52.5
Q ss_pred hcCC---ccEEEEccCccccCCCCCCCCCCC-CcccHHHHHHHHhhC-----CCCeEEEecCCCCHHHHHHHHH------
Q 017176 163 SLSP---TRHFIIHSRKALLNGISPAENRTI-PPLKYEYYYALLRDF-----PDLTFTLNGGINTVDEVNAALR------ 227 (376)
Q Consensus 163 e~~G---vd~I~vh~r~~~~~g~~~~~~~~~-~~~~~~~v~~~~~~~-----~~ipVi~nGgI~s~~da~~~l~------ 227 (376)
.+.| +|+|.+..-..... +. ... ++..++.+.++.+.. .++||++-||| +++++.++++
T Consensus 125 ~~~G~~~aDYv~~Gpvf~T~t----K~-~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~~~~~g 198 (540)
T 3nl6_A 125 SKMGPDMVDYIGVGTLFPTLT----KK-NPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQCVSSN 198 (540)
T ss_dssp HHTCC--CCEEEESCCSCCCC----CC-----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHHCBCTT
T ss_pred HHcCCCCCCEEEEcCCCCCCC----CC-CcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHhhcccc
Confidence 3578 99999854221100 00 111 234466666655432 48999999999 8899999997
Q ss_pred --cCcCeeEEchHHhhCCch
Q 017176 228 --KGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 228 --~Gad~VmiGRa~l~~P~l 245 (376)
.|+|+|.++++++..++.
T Consensus 199 ~~~GadgvAVvsaI~~a~dp 218 (540)
T 3nl6_A 199 GKRSLDGICVVSDIIASLDA 218 (540)
T ss_dssp SSCBCSCEEESHHHHTCTTH
T ss_pred cccCceEEEEeHHHhcCCCH
Confidence 789999999999976553
No 254
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=96.33 E-value=0.045 Score=50.72 Aligned_cols=121 Identities=6% Similarity=0.037 Sum_probs=72.5
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEec
Q 017176 63 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 142 (376)
Q Consensus 63 ~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR 142 (376)
.+.|+ +-+...|. -.|++++++|||.|=+ |.....+. .| |-..+.-..+.+...+++|++.++.|+.+ .-
T Consensus 32 ~g~~i-~~~tayDa----~sA~l~e~aG~d~ilv--GdSl~~~~-lG-~~dt~~vTldemi~h~~aV~r~~~~~~vv-aD 101 (281)
T 1oy0_A 32 DGHKW-AMLTAYDY----STARIFDEAGIPVLLV--GDSAANVV-YG-YDTTVPISIDELIPLVRGVVRGAPHALVV-AD 101 (281)
T ss_dssp HTCCE-EEEECCSH----HHHHHHHTTTCCEEEE--CTTHHHHT-TC-CSSSSSCCGGGTHHHHHHHHHHCTTSEEE-EE
T ss_pred CCCcE-EEEeCcCH----HHHHHHHHcCCCEEEE--CHHHHHHH-cC-CCCCCCCCHHHHHHHHHHHHhcCCCCeEE-EE
Confidence 34444 44566664 4788899999999943 32222111 11 22223344566777778887777766554 33
Q ss_pred CCCCCC-ccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEE
Q 017176 143 IGVDDH-DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFT 211 (376)
Q Consensus 143 ~g~~~~-~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi 211 (376)
+++-.. .+.++.++...++++++|+++|.+-++..+ .+.|+.+.+. .|||+
T Consensus 102 ~pfgsy~~s~~~a~~na~rl~~eaGa~aVklEdg~e~----------------~~~I~al~~a--gIpV~ 153 (281)
T 1oy0_A 102 LPFGSYEAGPTAALAAATRFLKDGGAHAVKLEGGERV----------------AEQIACLTAA--GIPVM 153 (281)
T ss_dssp CCTTSSTTCHHHHHHHHHHHHHTTCCSEEEEEBSGGG----------------HHHHHHHHHH--TCCEE
T ss_pred CCCCcccCCHHHHHHHHHHHHHHhCCeEEEECCcHHH----------------HHHHHHHHHC--CCCEE
Confidence 333222 245666665667788899999999886311 3456666654 78887
No 255
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=96.30 E-value=0.013 Score=54.25 Aligned_cols=95 Identities=14% Similarity=0.232 Sum_probs=62.6
Q ss_pred HHHHHHHhcccC--ccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHH-HHH
Q 017176 123 GEAMSVIAANTN--VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE-YYY 199 (376)
Q Consensus 123 ~eiv~~v~~~~~--~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~-~v~ 199 (376)
.+-++++++..+ .++.+-+ ++++++.+. + ++|+|+|-++.... .... .+.
T Consensus 169 ~~ai~~~r~~~~~~~~i~vev-------~tlee~~~A----~-~aGaD~I~ld~~~~---------------~~l~~~v~ 221 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEIEC-------ESFEEAKNA----M-NAGADIVMCDNLSV---------------LETKEIAA 221 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEEEE-------SSHHHHHHH----H-HHTCSEEEEETCCH---------------HHHHHHHH
T ss_pred HHHHHHHHHhCCCCceEEEEc-------CCHHHHHHH----H-HcCCCEEEECCCCH---------------HHHHHHHH
Confidence 456667776654 3444421 234454332 2 47999999875221 0111 122
Q ss_pred HHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCch
Q 017176 200 ALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 200 ~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
.+...++++||.++||| |.+.+.++.++|+|++.+|+.....|++
T Consensus 222 ~l~~~~~~~~i~AsGGI-~~~ni~~~~~aGaD~i~vGs~i~~a~~~ 266 (273)
T 2b7n_A 222 YRDAHYPFVLLEASGNI-SLESINAYAKSGVDAISVGALIHQATFI 266 (273)
T ss_dssp HHHHHCTTCEEEEESSC-CTTTHHHHHTTTCSEEECTHHHHTCCCC
T ss_pred HhhccCCCcEEEEECCC-CHHHHHHHHHcCCcEEEEcHHhcCCCCC
Confidence 23334567999999999 9999999999999999999998877765
No 256
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.26 E-value=0.023 Score=54.76 Aligned_cols=95 Identities=12% Similarity=0.155 Sum_probs=66.6
Q ss_pred CHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHH
Q 017176 118 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 197 (376)
Q Consensus 118 ~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~ 197 (376)
.++...+.++.+++....|+.+-+-. .+ .+.+ . .+.++|+|.|+++... |.+ ....+.
T Consensus 79 s~e~~~~~I~~vk~~~~~pvga~ig~--~~----~e~a---~-~l~eaGad~I~ld~a~----G~~--------~~~~~~ 136 (361)
T 3khj_A 79 DMESQVNEVLKVKNSGGLRVGAAIGV--NE----IERA---K-LLVEAGVDVIVLDSAH----GHS--------LNIIRT 136 (361)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEECT--TC----HHHH---H-HHHHTTCSEEEECCSC----CSB--------HHHHHH
T ss_pred CHHHHHHHHHHHHhccCceEEEEeCC--CH----HHHH---H-HHHHcCcCeEEEeCCC----CCc--------HHHHHH
Confidence 46777888898887777888776643 22 2222 2 2346899999987431 110 111456
Q ss_pred HHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEc
Q 017176 198 YYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 236 (376)
Q Consensus 198 v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiG 236 (376)
+.++++.+ ++|||+ |.+.+++++..+.+.|||+|.+|
T Consensus 137 i~~i~~~~-~~~Viv-g~v~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 137 LKEIKSKM-NIDVIV-GNVVTEEATKELIENGADGIKVG 173 (361)
T ss_dssp HHHHHHHC-CCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHhc-CCcEEE-ccCCCHHHHHHHHHcCcCEEEEe
Confidence 67777766 899887 67899999999999999999996
No 257
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.26 E-value=0.017 Score=55.90 Aligned_cols=98 Identities=15% Similarity=0.187 Sum_probs=64.2
Q ss_pred CHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHH
Q 017176 118 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 197 (376)
Q Consensus 118 ~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~ 197 (376)
+++...+.++.+++.-.+++.+- +++.. +.. +.++ .+.++|+|.|.++.-. |.+ +...+.
T Consensus 80 s~e~~~~~i~~vk~~~~l~vga~--vg~~~-~~~-~~~~----~lieaGvd~I~idta~----G~~--------~~~~~~ 139 (366)
T 4fo4_A 80 SIEQQAAQVHQVKISGGLRVGAA--VGAAP-GNE-ERVK----ALVEAGVDVLLIDSSH----GHS--------EGVLQR 139 (366)
T ss_dssp CHHHHHHHHHHHHTTTSCCCEEE--CCSCT-TCH-HHHH----HHHHTTCSEEEEECSC----TTS--------HHHHHH
T ss_pred CHHHHHHHHHHHHhcCceeEEEE--eccCh-hHH-HHHH----HHHhCCCCEEEEeCCC----CCC--------HHHHHH
Confidence 46777888888887533444443 33322 112 2222 2346899999986321 111 111456
Q ss_pred HHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEc
Q 017176 198 YYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 236 (376)
Q Consensus 198 v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiG 236 (376)
+.++++.++++|||+ |.+.|.+++.++.+.|||+|.+|
T Consensus 140 I~~ik~~~p~v~Vi~-G~v~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 140 IRETRAAYPHLEIIG-GNVATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp HHHHHHHCTTCEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHhcCCCceEe-eeeCCHHHHHHHHHcCCCEEEEe
Confidence 777887777888876 78999999999999999999995
No 258
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=96.23 E-value=0.014 Score=52.32 Aligned_cols=133 Identities=13% Similarity=0.094 Sum_probs=76.5
Q ss_pred HHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHh
Q 017176 83 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVS 162 (376)
Q Consensus 83 a~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~ 162 (376)
+..+.++|+|+|-|... . |.-- .+.+.+.++..++. ++.+.+=+.. .. +. . .+
T Consensus 75 ~~~~~~~Gad~Vll~~s----e--r~l~--------~~e~~~~~~~a~~~-Gl~~iv~v~~----~~---e~----~-~~ 127 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHS----E--KRML--------LADIEAVINKCKNL-GLETIVCTNN----IN---TS----K-AV 127 (219)
T ss_dssp HHHHHHHTCCEEEESBT----T--BCCB--------HHHHHHHHHHHHHH-TCEEEEEESS----SH---HH----H-HH
T ss_pred HHHHHHcCCCEEEECCc----c--ccCC--------HHHHHHHHHHHHHC-CCeEEEEeCC----ch---HH----H-HH
Confidence 36677889999998321 0 1111 12356666665543 5544443321 11 21 1 12
Q ss_pred hcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCC-CCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhh
Q 017176 163 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 241 (376)
Q Consensus 163 e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~ 241 (376)
.+.|.+.|.++.+...-.|..-. ...+-..+.+.+.++..+ ++||++-|||.+++++..+.+.|+|+|.+|++++.
T Consensus 128 ~~~~~~~i~~~~~~~iGtG~~~~---t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~ 204 (219)
T 2h6r_A 128 AALSPDCIAVEPPELIGTGIPVS---KANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVLLASGVVK 204 (219)
T ss_dssp TTTCCSEEEECCCC-----------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHHT
T ss_pred HhCCCCEEEEEeccccccCCCCc---cCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHHhC
Confidence 35688899998876411220000 000111223333344433 79999999999999999998899999999999998
Q ss_pred CCch
Q 017176 242 NPWY 245 (376)
Q Consensus 242 ~P~l 245 (376)
-++.
T Consensus 205 ~~d~ 208 (219)
T 2h6r_A 205 AKNV 208 (219)
T ss_dssp CSSH
T ss_pred cccH
Confidence 7773
No 259
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=96.18 E-value=0.073 Score=51.97 Aligned_cols=121 Identities=8% Similarity=-0.033 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHC-CCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccHHH
Q 017176 76 LDNLAKATELANAY-NYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQ 153 (376)
Q Consensus 76 ~~~~~~aa~~~~~~-G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~~ 153 (376)
++++++.++.+.+. ||..+-+..| .+++.-.+.+++||+.+ +.++.|...-+|+. ++
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG-----------------~~~~~d~~~v~avR~~~~~~~l~vDaN~~w~~----~~ 227 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGT-----------------TDCAGDVAILRAVREALPGVNLRVDPNAAWSV----PD 227 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECC-----------------SCHHHHHHHHHHHHHHCTTSEEEEECTTCSCH----HH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecC-----------------CCHHHHHHHHHHHHHhCCCCeEEeeCCCCCCH----HH
Confidence 68888888877777 9999988654 13455667788888776 56777777767753 34
Q ss_pred HHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcCe
Q 017176 154 LCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHH 232 (376)
Q Consensus 154 ~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad~ 232 (376)
.+++ .+.+++.|+.+|. . .++ +++..+++.+.. ++||.+...+.+.+++.++++ ..+|.
T Consensus 228 A~~~-~~~l~~~~i~~iE----q------------P~~--d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~ 287 (398)
T 4dye_A 228 SVRA-GIALEELDLEYLE----D------------PCV--GIEGMAQVKAKV-RIPLCTNMCVVRFEDFAPAMRLNAVDV 287 (398)
T ss_dssp HHHH-HHHHGGGCCSEEE----C------------CSS--HHHHHHHHHHHC-CSCEEESSSCCSGGGHHHHHHTTCCSE
T ss_pred HHHH-HHHHhhcCCCEEc----C------------CCC--CHHHHHHHHhhC-CCCEEeCCcCCCHHHHHHHHHhCCCCE
Confidence 4443 4456778888875 1 111 467777777765 899999999999999999998 56999
Q ss_pred eEEch
Q 017176 233 VMVGR 237 (376)
Q Consensus 233 VmiGR 237 (376)
|++--
T Consensus 288 v~~k~ 292 (398)
T 4dye_A 288 IHGDV 292 (398)
T ss_dssp EEECH
T ss_pred EEeCc
Confidence 98733
No 260
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.17 E-value=0.023 Score=52.03 Aligned_cols=70 Identities=11% Similarity=-0.019 Sum_probs=55.0
Q ss_pred HHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchH
Q 017176 159 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 238 (376)
Q Consensus 159 ~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa 238 (376)
++.++++|+++|.|-.-.....| ..+.+..+++.+ ++||+.-+.|.+..++.++++.|||+|.++-.
T Consensus 71 A~~~~~~GA~~isvlt~~~~f~G------------~~~~l~~i~~~v-~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~ 137 (254)
T 1vc4_A 71 ALAYARGGARAVSVLTEPHRFGG------------SLLDLKRVREAV-DLPLLRKDFVVDPFMLEEARAFGASAALLIVA 137 (254)
T ss_dssp HHHHHHTTCSEEEEECCCSSSCC------------CHHHHHHHHHHC-CSCEEEESCCCSHHHHHHHHHTTCSEEEEEHH
T ss_pred HHHHHHcCCCEEEEecchhhhcc------------CHHHHHHHHHhc-CCCEEECCcCCCHHHHHHHHHcCCCEEEECcc
Confidence 45567899999988432222222 156677777764 99999999999999999999999999999999
Q ss_pred Hhh
Q 017176 239 AYQ 241 (376)
Q Consensus 239 ~l~ 241 (376)
.+.
T Consensus 138 ~l~ 140 (254)
T 1vc4_A 138 LLG 140 (254)
T ss_dssp HHG
T ss_pred chH
Confidence 988
No 261
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=96.16 E-value=0.004 Score=57.43 Aligned_cols=69 Identities=16% Similarity=0.043 Sum_probs=56.3
Q ss_pred HHHhhcCCccEEEE---ccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEE
Q 017176 159 YKVSSLSPTRHFII---HSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 235 (376)
Q Consensus 159 ~~~~e~~Gvd~I~v---h~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~Vmi 235 (376)
++.+++.|++.+++ .+ .+.+.+.++.++. .+||...|||++. ++++++ .|||-|.+
T Consensus 44 A~~~~~~Ga~~l~vvDL~~------------------~n~~~i~~i~~~~-~~pv~vgGGir~~-~~~~~l-~Ga~~Vii 102 (260)
T 2agk_A 44 AKLYKDRDVQGCHVIKLGP------------------NNDDAAREALQES-PQFLQVGGGINDT-NCLEWL-KWASKVIV 102 (260)
T ss_dssp HHHHHHTTCTTCEEEEESS------------------SCHHHHHHHHHHS-TTTSEEESSCCTT-THHHHT-TTCSCEEE
T ss_pred HHHHHHcCCCEEEEEeCCC------------------CCHHHHHHHHhcC-CceEEEeCCCCHH-HHHHHh-cCCCEEEE
Confidence 44566789998887 43 1267778888775 7999999999987 999999 99999999
Q ss_pred chHHhhC-----CchhhH
Q 017176 236 GRAAYQN-----PWYTLG 248 (376)
Q Consensus 236 GRa~l~~-----P~lf~~ 248 (376)
|++++.| |.++.+
T Consensus 103 gs~a~~~~g~~~p~~~~~ 120 (260)
T 2agk_A 103 TSWLFTKEGHFQLKRLER 120 (260)
T ss_dssp CGGGBCTTCCBCHHHHHH
T ss_pred CcHHHhhcCCCCHHHHHH
Confidence 9999999 987543
No 262
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=96.15 E-value=0.013 Score=57.25 Aligned_cols=131 Identities=10% Similarity=-0.098 Sum_probs=85.7
Q ss_pred HHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHHHHHHH
Q 017176 80 AKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDF 157 (376)
Q Consensus 80 ~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~~~~~~ 157 (376)
.+.++.+.+.||..+-+..|-|... .... |..-..+++...+.+++||+.+ ++++.+...-+|+ .++.+++
T Consensus 157 ~~~a~~~~~~G~~~~Kik~g~~~~~--~~~~-g~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~----~~~A~~~ 229 (400)
T 4dxk_A 157 DELAHSLLEDGITAMKIWPFDAAAE--KTRG-QYISMPDLKSALEPFEKIRKAVGDKMDIMVEFHSMWQ----LLPAMQI 229 (400)
T ss_dssp HHHHHHHHHTTCCEEEECTTHHHHH--HHTT-SCCCHHHHHHHHHHHHHHHHHHGGGSEEEEECTTCBC----HHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEcCCCcccc--cccc-CcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCC----HHHHHHH
Confidence 3445566778999998876532110 0000 1000123567788999999987 4677777666664 3454544
Q ss_pred HHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcCeeEE
Q 017176 158 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 235 (376)
Q Consensus 158 i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad~Vmi 235 (376)
.+.+++.|+++|.- + +++-+++..+++++.. ++||.+.+.+.+++++.++++ ..+|.|++
T Consensus 230 -~~~L~~~~i~~iEe----P------------~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~ 290 (400)
T 4dxk_A 230 -AKALTPYQTFWHED----P------------IKMDSLSSLTRYAAVS-PAPISASETLGSRWAFRDLLETGAAGVVML 290 (400)
T ss_dssp -HHHTGGGCCSEEEC----C------------BCTTSGGGHHHHHHHC-SSCEEECTTCCHHHHHHHHHHTTCCCEEEE
T ss_pred -HHHHhhcCCCEEEc----C------------CCcccHHHHHHHHHhC-CCCEEecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 45667889998871 1 1111244456666664 899999999999999999999 45899987
No 263
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=96.08 E-value=0.034 Score=49.66 Aligned_cols=138 Identities=14% Similarity=0.185 Sum_probs=84.7
Q ss_pred CCCEEEEec-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEec
Q 017176 64 QHPIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 142 (376)
Q Consensus 64 ~~p~~vQL~-g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR 142 (376)
+.++++=+- +--|.....+++.+.++ +|.+.+|..... ...+. -+ +. +.-+++=++
T Consensus 50 g~~VflDlK~~DIpnTv~~a~~~~~~~-ad~vTvh~~~G~----------~~~~~---~~----~~-----~~~v~vLts 106 (215)
T 3ve9_A 50 DGIKILDLKLADIDNTMILIVDELKDI-TNSFIAHAFVGV----------EGSLA---SL----SQ-----RVDLFLVLS 106 (215)
T ss_dssp CSEEEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEGGGCT----------TTTHH---HH----HH-----HSEEEEECC
T ss_pred CCcEEEEecccCchhHHHHHHHHHHHh-hheEEEeCCCCc----------HHHHH---hH----hc-----CCCEEEEEe
Confidence 567776664 44577777788888889 999999853220 11111 01 11 112555555
Q ss_pred CCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCH-HH
Q 017176 143 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV-DE 221 (376)
Q Consensus 143 ~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~-~d 221 (376)
++..+.. .+....++++.+++|++.+.+++.. .+.+..+++..++ .++..+||..- .+
T Consensus 107 ~s~~~~~--~~~v~~~a~~a~~~G~~GvV~sat~------------------~~e~~~ir~~~~~-f~~v~pGI~~~g~~ 165 (215)
T 3ve9_A 107 MSHPGWN--DAFYPYLREVARRVNPKGFVAPATR------------------PSMISRVKGDFPD-KLVISPGVGTQGAK 165 (215)
T ss_dssp CSSTTCC--GGGHHHHHHHHHHHCCSEEECCTTS------------------HHHHHHHHHHCTT-SEEEECCTTSTTCC
T ss_pred cCCcchH--HHHHHHHHHHHHHcCCCceeeCCCC------------------HHHHHHHHHhCCC-cEEEcCCCCcCcCC
Confidence 5432211 1223334556667899988876432 2334555666667 78888999742 25
Q ss_pred HHHHHHcCcCeeEEchHHhhCCch
Q 017176 222 VNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 222 a~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
..++++.|+|.+.+||+++..++-
T Consensus 166 ~~~a~~~Gad~iVvGr~I~~a~dp 189 (215)
T 3ve9_A 166 PGIALCHGADYEIVGRSVYQSADP 189 (215)
T ss_dssp TTHHHHTTCSEEEECHHHHTSSSH
T ss_pred HHHHHHcCCCEEEeCHHHcCCCCH
Confidence 667788999999999999987653
No 264
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=96.02 E-value=0.13 Score=47.53 Aligned_cols=120 Identities=9% Similarity=0.010 Sum_probs=73.2
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCcc-EEEEec
Q 017176 64 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVP-VSVKCR 142 (376)
Q Consensus 64 ~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~p-v~vKiR 142 (376)
+.|+ +-+...|. -.|++++++|||.|=+ |.....+. .| |-..+.-..+.+...+++|++.++.| |.+-+.
T Consensus 16 g~~i-~~~tayDa----~sA~l~e~aG~d~ilv--GdSl~~~~-lG-~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~p 86 (275)
T 1o66_A 16 GEKI-AMLTAYES----SFAALMDDAGVEMLLV--GDSLGMAV-QG-RKSTLPVSLRDMCYHTECVARGAKNAMIVSDLP 86 (275)
T ss_dssp TCCE-EEEECCSH----HHHHHHHHTTCCEEEE--CTTHHHHT-TC-CSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECC
T ss_pred CCcE-EEEeCcCH----HHHHHHHHcCCCEEEE--CHHHHHHH-cC-CCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECC
Confidence 4444 34566664 4788899999999943 33222211 11 23334456788888888888888754 555544
Q ss_pred CCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE
Q 017176 143 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL 212 (376)
Q Consensus 143 ~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~ 212 (376)
.|-. ..+.++.++.+.++.+ +|+++|.+-++..+ .+.|+.+.+. .|||++
T Consensus 87 fgsy-~~s~~~a~~na~rl~k-aGa~aVklEdg~e~----------------~~~I~al~~a--gIpV~g 136 (275)
T 1o66_A 87 FGAY-QQSKEQAFAAAAELMA-AGAHMVKLEGGVWM----------------AETTEFLQMR--GIPVCA 136 (275)
T ss_dssp TTSS-SSCHHHHHHHHHHHHH-TTCSEEEEECSGGG----------------HHHHHHHHHT--TCCEEE
T ss_pred CCCc-cCCHHHHHHHHHHHHH-cCCcEEEECCcHHH----------------HHHHHHHHHc--CCCeEe
Confidence 4311 1345566665556655 99999999876311 4456666553 788874
No 265
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.01 E-value=0.4 Score=42.96 Aligned_cols=117 Identities=11% Similarity=0.054 Sum_probs=76.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCC--C---c
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDD--H---D 149 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~--~---~ 149 (376)
++..+.+.|+.+++.|..+|.++ + .+-++++|+.+++||.-..+..+.+ . .
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~~--------------~----------~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~ 89 (229)
T 3q58_A 34 KPEIVAAMAQAAASAGAVAVRIE--------------G----------IENLRTVRPHLSVPIIGIIKRDLTGSPVRITP 89 (229)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEE--------------S----------HHHHHHHGGGCCSCEEEECBCCCSSCCCCBSC
T ss_pred CcchHHHHHHHHHHCCCcEEEEC--------------C----------HHHHHHHHHhcCCCEEEEEeecCCCCceEeCc
Confidence 47889999999999999999862 0 2457888999999986444432221 0 2
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcC
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG 229 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~G 229 (376)
+.+++ .. +.++|+|.|.+-..... .+ ....+++..+. +. ++++++ ++.+.+++.++.+.|
T Consensus 90 ~~~~i----~~-~~~aGad~I~l~~~~~~----~p-------~~l~~~i~~~~-~~-g~~v~~--~v~t~eea~~a~~~G 149 (229)
T 3q58_A 90 YLQDV----DA-LAQAGADIIAFDASFRS----RP-------VDIDSLLTRIR-LH-GLLAMA--DCSTVNEGISCHQKG 149 (229)
T ss_dssp SHHHH----HH-HHHHTCSEEEEECCSSC----CS-------SCHHHHHHHHH-HT-TCEEEE--ECSSHHHHHHHHHTT
T ss_pred cHHHH----HH-HHHcCCCEEEECccccC----Ch-------HHHHHHHHHHH-HC-CCEEEE--ecCCHHHHHHHHhCC
Confidence 23332 22 23589999987653211 00 01133444443 33 666665 789999999999999
Q ss_pred cCeeEE
Q 017176 230 AHHVMV 235 (376)
Q Consensus 230 ad~Vmi 235 (376)
+|.|.+
T Consensus 150 ad~Ig~ 155 (229)
T 3q58_A 150 IEFIGT 155 (229)
T ss_dssp CSEEEC
T ss_pred CCEEEe
Confidence 999965
No 266
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=95.98 E-value=0.033 Score=51.95 Aligned_cols=109 Identities=19% Similarity=0.222 Sum_probs=68.0
Q ss_pred cCCCCccccccCCHHHH-----HHHHHHHhcccC--ccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccc
Q 017176 106 AGHGCFGVSLMLDPKFV-----GEAMSVIAANTN--VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKAL 178 (376)
Q Consensus 106 ~r~g~yG~~l~~~~~~~-----~eiv~~v~~~~~--~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~ 178 (376)
+|.+-+++-|..+-... .+-++.+|+..+ .++.|-+ ++.+++.+ ++ ++|+|+|-++.-+.
T Consensus 161 HR~~L~d~~LIkdnHi~~aggi~~av~~ar~~~~~~~~IgVev-------~t~eea~e----A~-~aGaD~I~ld~~~~- 227 (286)
T 1x1o_A 161 HRYGLFDGILLKENHVRAAGGVGEAVRRAKARAPHYLKVEVEV-------RSLEELEE----AL-EAGADLILLDNFPL- 227 (286)
T ss_dssp CCSSSSSCEEECHHHHHHHTSHHHHHHHHHHHSCTTSCEEEEE-------SSHHHHHH----HH-HHTCSEEEEESCCH-
T ss_pred cccccccceEEECCHHHHhCCHHHHHHHHHHhCCCCCEEEEEe-------CCHHHHHH----HH-HcCCCEEEECCCCH-
Confidence 45555455555554332 334555565542 3455522 23445432 22 57999999886431
Q ss_pred cCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCch
Q 017176 179 LNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 179 ~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
+.+++.++.. .++|+.+.||| +.+.+.+..++|+|+|.+|.....-|++
T Consensus 228 -----------------~~~k~av~~v~~~ipi~AsGGI-t~eni~~~a~tGvD~IsVgs~~~~a~~~ 277 (286)
T 1x1o_A 228 -----------------EALREAVRRVGGRVPLEASGNM-TLERAKAAAEAGVDYVSVGALTHSAKAL 277 (286)
T ss_dssp -----------------HHHHHHHHHHTTSSCEEEESSC-CHHHHHHHHHHTCSEEECTHHHHSCCCC
T ss_pred -----------------HHHHHHHHHhCCCCeEEEEcCC-CHHHHHHHHHcCCCEEEEcHHHcCCCce
Confidence 2222332222 26999999999 6999999999999999999877766764
No 267
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=95.93 E-value=0.12 Score=48.64 Aligned_cols=160 Identities=13% Similarity=0.098 Sum_probs=88.0
Q ss_pred ccCCCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEE
Q 017176 59 AFSPEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVS 138 (376)
Q Consensus 59 ~~~~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~ 138 (376)
..+..+.|++ =+...|. -.|++++++|||.|=+...+=. ... | |-....-..+.+...++.|.+.++.||.
T Consensus 23 ~l~~~~~~i~-~~~ayD~----~sA~l~e~aG~dai~vs~~s~a-~~~--G-~pD~~~vt~~em~~~~~~I~r~~~~pvi 93 (305)
T 3ih1_A 23 ALVEANEILQ-IPGAHDA----MAALVARNTGFLALYLSGAAYT-ASK--G-LPDLGIVTSTEVAERARDLVRATDLPVL 93 (305)
T ss_dssp HHHHSSSCEE-EEBCSSH----HHHHHHHHTTCSCEEECHHHHH-HHH--T-CCSSSCSCHHHHHHHHHHHHHHHCCCEE
T ss_pred HHHhCCCcEE-EecCcCH----HHHHHHHHcCCCEEEECcHHHH-HhC--C-CCCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 3333445543 3455564 3678888999999987531100 000 0 1111123456677777888777889999
Q ss_pred EEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccc-cCCCCCCCCCCCCccc--HHHHHHHHhhCCCCeEEEecC
Q 017176 139 VKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKAL-LNGISPAENRTIPPLK--YEYYYALLRDFPDLTFTLNGG 215 (376)
Q Consensus 139 vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~-~~g~~~~~~~~~~~~~--~~~v~~~~~~~~~ipVi~nGg 215 (376)
+-+-.|+.+. +.+.+.+ +.++++|+++|.+-+.... .-|+.+ +..+-+.. .+.|+.+++. +++++.++.
T Consensus 94 aD~d~Gyg~~---~~v~~~v-~~l~~aGaagv~iED~~~~krcGh~~--gk~l~~~~e~~~rI~Aa~~A--~~~~~I~AR 165 (305)
T 3ih1_A 94 VDIDTGFGGV---LNVARTA-VEMVEAKVAAVQIEDQQLPKKCGHLN--GKKLVTTEELVQKIKAIKEV--APSLYIVAR 165 (305)
T ss_dssp EECTTCSSSH---HHHHHHH-HHHHHTTCSEEEEECBCSSCCTTCTT--CCCBCCHHHHHHHHHHHHHH--CTTSEEEEE
T ss_pred EECCCCCCCH---HHHHHHH-HHHHHhCCcEEEECCCCCCcccCCCC--CCcccCHHHHHHHHHHHHHc--CCCeEEEEe
Confidence 9999987542 3334433 3445799999999876521 112111 11122211 2234444444 455555555
Q ss_pred CCCH---------HHHHHHHHcCcCeeEE
Q 017176 216 INTV---------DEVNAALRKGAHHVMV 235 (376)
Q Consensus 216 I~s~---------~da~~~l~~Gad~Vmi 235 (376)
.... +++....+.|||+|.+
T Consensus 166 tda~~~~g~~~ai~Ra~ay~eAGAD~i~~ 194 (305)
T 3ih1_A 166 TDARGVEGLDEAIERANAYVKAGADAIFP 194 (305)
T ss_dssp ECCHHHHCHHHHHHHHHHHHHHTCSEEEE
T ss_pred eccccccCHHHHHHHHHHHHHcCCCEEEE
Confidence 5543 2223333479999998
No 268
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=95.90 E-value=0.18 Score=46.22 Aligned_cols=143 Identities=11% Similarity=0.038 Sum_probs=86.4
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCcc-EEEEe
Q 017176 63 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVP-VSVKC 141 (376)
Q Consensus 63 ~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~p-v~vKi 141 (376)
.+.|+ +-+...|. -.|++++++|||.|=+ |.....+. .| |-..+.-..+.+..-+++|++.++.| |.+-+
T Consensus 15 ~g~~i-~~~tayD~----~sA~l~e~aG~d~ilv--Gdsl~~~~-lG-~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~ 85 (264)
T 1m3u_A 15 EKKRF-ATITAYDY----SFAKLFADEGLNVMLV--GDSLGMTV-QG-HDSTLPVTVADIAYHTAAVRRGAPNCLLLADL 85 (264)
T ss_dssp HTCCE-EEEECCSH----HHHHHHHHHTCCEEEE--CTTHHHHT-TC-CSSSTTCCHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred CCCcE-EEEeCcCH----HHHHHHHHcCCCEEEE--CHHHHHHH-cC-CCCCCCcCHHHHHHHHHHHHhhCCCCcEEEEC
Confidence 34444 34566664 4778889999999977 43332211 12 23334455678888888888887754 55555
Q ss_pred cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE---------
Q 017176 142 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL--------- 212 (376)
Q Consensus 142 R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~--------- 212 (376)
..| ...+.++.++.+.++.+ +|+++|.+-++..+ .+.++.+.+. .|||++
T Consensus 86 pfg--sy~~~~~a~~~a~rl~k-aGa~aVklEgg~e~----------------~~~I~al~~a--gipV~gHiGLtPq~v 144 (264)
T 1m3u_A 86 PFM--AYATPEQAFENAATVMR-AGANMVKIEGGEWL----------------VETVQMLTER--AVPVCGHLGLTPQSV 144 (264)
T ss_dssp CTT--SSSSHHHHHHHHHHHHH-TTCSEEECCCSGGG----------------HHHHHHHHHT--TCCEEEEEESCGGGH
T ss_pred CCC--CcCCHHHHHHHHHHHHH-cCCCEEEECCcHHH----------------HHHHHHHHHC--CCCeEeeecCCceee
Confidence 443 22255666665556655 99999999876311 4456666554 789883
Q ss_pred --ecCC----CCHHHHHH-------HHHcCcCeeEE
Q 017176 213 --NGGI----NTVDEVNA-------ALRKGAHHVMV 235 (376)
Q Consensus 213 --nGgI----~s~~da~~-------~l~~Gad~Vmi 235 (376)
.||. ++.+.+++ +.+.|||+|.+
T Consensus 145 ~~~ggf~v~grt~~~a~~~i~rA~a~~eAGA~~ivl 180 (264)
T 1m3u_A 145 NIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVL 180 (264)
T ss_dssp HHHTSSCCCCCSHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred cccCCeEEEeCCHHHHHHHHHHHHHHHHCCCcEEEE
Confidence 3443 24333333 23379998877
No 269
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=95.89 E-value=0.0096 Score=55.21 Aligned_cols=75 Identities=11% Similarity=0.074 Sum_probs=58.0
Q ss_pred HHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEch
Q 017176 158 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 237 (376)
Q Consensus 158 i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGR 237 (376)
+++.+++.|+++|.|..-....+| ..+.+.++++. +++||+..+.|.|..++.++++.|||+|.++-
T Consensus 77 ~A~~y~~~GA~~isvltd~~~f~G------------s~~~l~~ir~~-v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~ 143 (272)
T 3qja_A 77 LAQAYQDGGARIVSVVTEQRRFQG------------SLDDLDAVRAS-VSIPVLRKDFVVQPYQIHEARAHGADMLLLIV 143 (272)
T ss_dssp HHHHHHHTTCSEEEEECCGGGHHH------------HHHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTTCSEEEEEG
T ss_pred HHHHHHHcCCCEEEEecChhhcCC------------CHHHHHHHHHh-CCCCEEECccccCHHHHHHHHHcCCCEEEEec
Confidence 355677899999998754332222 15667777766 49999999999999999999999999999998
Q ss_pred HHhhCCch
Q 017176 238 AAYQNPWY 245 (376)
Q Consensus 238 a~l~~P~l 245 (376)
+.+.+..+
T Consensus 144 a~l~~~~l 151 (272)
T 3qja_A 144 AALEQSVL 151 (272)
T ss_dssp GGSCHHHH
T ss_pred ccCCHHHH
Confidence 88765543
No 270
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=95.88 E-value=0.17 Score=47.98 Aligned_cols=152 Identities=13% Similarity=0.157 Sum_probs=80.8
Q ss_pred HHHHHHHCCCCEEEecCCCCCccccCCCCcccccc-CCHHHHHHHHHHHhcccCccEEEEe--cC-CCCCCcc--H----
Q 017176 82 ATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLM-LDPKFVGEAMSVIAANTNVPVSVKC--RI-GVDDHDS--Y---- 151 (376)
Q Consensus 82 aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~-~~~~~~~eiv~~v~~~~~~pv~vKi--R~-g~~~~~~--~---- 151 (376)
.++.+.+.|+|+|-+++- .+.+. ...+. ...+.+.++.++.+ ..++|+.+-+ +. +..+..+ +
T Consensus 115 sve~a~~~GADAVk~lv~------~g~d~-~~e~~~~q~~~l~rv~~ec~-~~GiPlllEil~y~~~~~~~~~~~~a~~~ 186 (332)
T 3iv3_A 115 SIKRLKEAGADAVKFLLY------YDVDG-DPQVNVQKQAYIERIGSECQ-AEDIPFFLEILTYDETISNNSSVEFAKVK 186 (332)
T ss_dssp CHHHHHHTTCSEEEEEEE------ECTTS-CHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEECBTTBSCTTSHHHHTTH
T ss_pred CHHHHHHcCCCEEEEEEE------cCCCc-hHHHHHHHHHHHHHHHHHHH-HcCCceEEEEeccCCCCCCCcchhhhccC
Confidence 467788999999988641 11111 10000 11234555555543 3489988744 22 2222111 1
Q ss_pred HHHHHHHHHHh--hcCCccEEEEc-cCcc-ccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEE-EecCCCCHHHHHHHH
Q 017176 152 NQLCDFIYKVS--SLSPTRHFIIH-SRKA-LLNGISPAENRTIPPLKYEYYYALLRDFPDLTFT-LNGGINTVDEVNAAL 226 (376)
Q Consensus 152 ~~~~~~i~~~~--e~~Gvd~I~vh-~r~~-~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi-~nGgI~s~~da~~~l 226 (376)
.+.+....+++ .+.|+|.+-+. .+.. ...|+...+.-+...-..+.++++... ..+|+| .+||+ +.++..+++
T Consensus 187 p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a-~~~P~v~lsgG~-~~~~fl~~v 264 (332)
T 3iv3_A 187 VHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEAS-TDLPYIYLSAGV-SAELFQETL 264 (332)
T ss_dssp HHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHT-CSSCEEEECTTC-CHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhc-CCCCEEEECCCC-CHHHHHHHH
Confidence 23344445566 46799999886 2221 112322111001100012335566554 489965 79998 556655554
Q ss_pred ----HcCc--CeeEEchHHhhCC
Q 017176 227 ----RKGA--HHVMVGRAAYQNP 243 (376)
Q Consensus 227 ----~~Ga--d~VmiGRa~l~~P 243 (376)
+.|| .||.+||....+.
T Consensus 265 ~~A~~aGa~f~Gv~~GRnvwq~~ 287 (332)
T 3iv3_A 265 VFAHKAGAKFNGVLCGRATWAGS 287 (332)
T ss_dssp HHHHHHTCCCCEEEECHHHHTTH
T ss_pred HHHHHcCCCcceEEeeHHHHHhh
Confidence 4799 9999999998773
No 271
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=95.85 E-value=0.052 Score=48.58 Aligned_cols=143 Identities=17% Similarity=0.141 Sum_probs=81.3
Q ss_pred CCCEEEEec-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccC--ccEEEE
Q 017176 64 QHPIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN--VPVSVK 140 (376)
Q Consensus 64 ~~p~~vQL~-g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~--~pv~vK 140 (376)
+.++++=+- +..|+.+.++ +.++|+|.+.+|..+. .+-+.+.++.+++.-. ..+.|-
T Consensus 58 ~~~iflDlKl~Dip~t~~~~---~~~~Gad~vtVH~~~g-----------------~~~l~~a~~~~~~~g~~~~~~~Vt 117 (221)
T 3exr_A 58 DKIIVADTKCADAGGTVAKN---NAVRGADWMTCICSAT-----------------IPTMKAARKAIEDINPDKGEIQVE 117 (221)
T ss_dssp TSEEEEEEEECSCHHHHHHH---HHTTTCSEEEEETTSC-----------------HHHHHHHHHHHHHHCTTTCEEEEE
T ss_pred CCcEEEEEEeeccHHHHHHH---HHHcCCCEEEEeccCC-----------------HHHHHHHHHHHHhcCCCcceEEEE
Confidence 345554432 3568877766 5778999999986322 1234455555544211 223333
Q ss_pred ecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCc-cccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCH
Q 017176 141 CRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK-ALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV 219 (376)
Q Consensus 141 iR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~-~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~ 219 (376)
+-.++ +.+++. .+ .+.|++.+.+|-.. ....|... .+.....+++... .+++|...||| ++
T Consensus 118 ~lts~----~~~~~~----~~-~~~~~~~~v~~~a~~~~~~Gvv~------s~~e~~~ir~~~~--~~~~i~v~gGI-~~ 179 (221)
T 3exr_A 118 LYGDW----TYDQAQ----QW-LDAGISQAIYHQSRDALLAGETW------GEKDLNKVKKLIE--MGFRVSVTGGL-SV 179 (221)
T ss_dssp CCSSC----CHHHHH----HH-HHTTCCEEEEECCHHHHHHTCCC------CHHHHHHHHHHHH--HTCEEEEESSC-CG
T ss_pred EcCCC----CHHHHH----HH-HcCCHHHHHHHHHHhcCCCcccc------CHHHHHHHHHhhc--CCceEEEECCC-CH
Confidence 22222 223322 12 24789998887433 22222110 1111223333332 26889999999 67
Q ss_pred HHHHHHHHcCcCeeEEchHHhhCCc
Q 017176 220 DEVNAALRKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 220 ~da~~~l~~Gad~VmiGRa~l~~P~ 244 (376)
+++..+.+.|||.+.+||++...+.
T Consensus 180 ~~~~~~~~aGad~~VvG~~I~~a~d 204 (221)
T 3exr_A 180 DTLKLFEGVDVFTFIAGRGITEAKN 204 (221)
T ss_dssp GGGGGGTTCCCSEEEECHHHHTSSS
T ss_pred HHHHHHHHCCCCEEEECchhhCCCC
Confidence 7887777799999999999886554
No 272
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=95.85 E-value=0.33 Score=45.48 Aligned_cols=143 Identities=17% Similarity=0.177 Sum_probs=84.5
Q ss_pred CCCEEEEec-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCcc----EE
Q 017176 64 QHPIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVP----VS 138 (376)
Q Consensus 64 ~~p~~vQL~-g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~p----v~ 138 (376)
+.++++=+- +--|.....+++.+.++|+|.+.+|. ||+ ++-+...++..++.-..| |+
T Consensus 76 g~~IflDlKl~DIpnTv~~av~~~a~lGaD~vTVHa------------~~G-----~~~m~aa~e~a~~~~~~~~llaVt 138 (303)
T 3ru6_A 76 DFKIFLDLKFHDIPNTMADACEEVSKLGVDMINIHA------------SAG-----KIAIQEVMTRLSKFSKRPLVLAVS 138 (303)
T ss_dssp CCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEG------------GGC-----HHHHHHHHHHHTTSSSCCEEEEEC
T ss_pred CCCEEEEeeeccCchhHHHHHHHHHhcCCCEEEEec------------cCC-----HHHHHHHHHHHHhcCCCceEEEEE
Confidence 556666553 34466677777888889999999984 122 234455555554332222 23
Q ss_pred EEecCCCCC-----CccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEe
Q 017176 139 VKCRIGVDD-----HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN 213 (376)
Q Consensus 139 vKiR~g~~~-----~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~n 213 (376)
+.++.+..+ ..++.+.+..+++...++|++.+..++.. +..+++..++-.++..
T Consensus 139 vLTS~s~~~l~~l~~~~~~e~V~~lA~~a~~~G~dGvV~s~~E---------------------~~~IR~~~~~~fl~VT 197 (303)
T 3ru6_A 139 ALTSFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVCSVFE---------------------SKKIKEHTSSNFLTLT 197 (303)
T ss_dssp SCTTCCHHHHHHHHSSCHHHHHHHHHHHHHHTTCSEEECCTTT---------------------HHHHHHHSCTTSEEEE
T ss_pred EecCCCHHHHHHHHcCCHHHHHHHHHHHHHHcCCCEEEECHHH---------------------HHHHHHhCCCccEEEC
Confidence 333332110 01233333334566678999998764321 2244444545568888
Q ss_pred cCCCCHH----------HHHHHHHcCcCeeEEchHHhhCCc
Q 017176 214 GGINTVD----------EVNAALRKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 214 GgI~s~~----------da~~~l~~Gad~VmiGRa~l~~P~ 244 (376)
+||.-.. ++.++++.|||.+.+||++...+.
T Consensus 198 PGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~~a~d 238 (303)
T 3ru6_A 198 PGIRPFGETNDDQKRVANLAMARENLSDYIVVGRPIYKNEN 238 (303)
T ss_dssp CCCCTTC--------CCSHHHHHHTTCSEEEECHHHHTSSC
T ss_pred CCcCcccCCcccccccCCHHHHHHcCCCEEEEChHHhCCCC
Confidence 8887221 355667899999999999998665
No 273
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.83 E-value=0.023 Score=52.60 Aligned_cols=73 Identities=14% Similarity=0.046 Sum_probs=56.2
Q ss_pred HHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchH
Q 017176 159 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 238 (376)
Q Consensus 159 ~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa 238 (376)
++.++++|+++|.|-.-....+| ..+.+.++++. +++||+..+.|.++.++.++...|||+|.++-.
T Consensus 85 A~~y~~~GA~~IsVltd~~~f~G------------s~~~L~~ir~~-v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a 151 (272)
T 3tsm_A 85 AKAYEEGGAACLSVLTDTPSFQG------------APEFLTAARQA-CSLPALRKDFLFDPYQVYEARSWGADCILIIMA 151 (272)
T ss_dssp HHHHHHTTCSEEEEECCSTTTCC------------CHHHHHHHHHT-SSSCEEEESCCCSTHHHHHHHHTTCSEEEEETT
T ss_pred HHHHHHCCCCEEEEeccccccCC------------CHHHHHHHHHh-cCCCEEECCccCCHHHHHHHHHcCCCEEEEccc
Confidence 45667899999988643322222 25677777665 599999999999999999999999999999988
Q ss_pred HhhCCc
Q 017176 239 AYQNPW 244 (376)
Q Consensus 239 ~l~~P~ 244 (376)
.+.+..
T Consensus 152 ~L~~~~ 157 (272)
T 3tsm_A 152 SVDDDL 157 (272)
T ss_dssp TSCHHH
T ss_pred ccCHHH
Confidence 875433
No 274
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=95.82 E-value=0.019 Score=53.97 Aligned_cols=66 Identities=17% Similarity=0.217 Sum_probs=48.4
Q ss_pred cCCccEEEEccCccccCCCCCCCCCCCCcccHH-HHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhC
Q 017176 164 LSPTRHFIIHSRKALLNGISPAENRTIPPLKYE-YYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 242 (376)
Q Consensus 164 ~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~-~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 242 (376)
++|+|+|-++..+. .... .+..+...++++||.++||| |.+.+.++.++|+|++.+|+.....
T Consensus 215 ~aGaD~I~ld~~~~---------------~~l~~~v~~l~~~~~~~~I~ASGGI-t~~ni~~~~~aGaD~i~vGs~i~~a 278 (299)
T 2jbm_A 215 EAGADLVLLDNFKP---------------EELHPTATVLKAQFPSVAVEASGGI-TLDNLPQFCGPHIDVISMGMLTQAA 278 (299)
T ss_dssp HTTCSEEEEESCCH---------------HHHHHHHHHHHHHCTTSEEEEESSC-CTTTHHHHCCTTCCEEECTHHHHSC
T ss_pred HcCCCEEEECCCCH---------------HHHHHHHHHhhccCCCeeEEEECCC-CHHHHHHHHHCCCCEEEEChhhcCC
Confidence 48999999875221 0111 12222233567999999999 9999999999999999999977666
Q ss_pred Cch
Q 017176 243 PWY 245 (376)
Q Consensus 243 P~l 245 (376)
|++
T Consensus 279 ~~~ 281 (299)
T 2jbm_A 279 PAL 281 (299)
T ss_dssp CCC
T ss_pred CCc
Confidence 765
No 275
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=95.76 E-value=0.012 Score=56.69 Aligned_cols=63 Identities=11% Similarity=0.057 Sum_probs=47.6
Q ss_pred HhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEc
Q 017176 161 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 236 (376)
Q Consensus 161 ~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiG 236 (376)
.+.++|+|.|++|.-. |.+ ...++.+..+++..+++|||+ |+|.|++++..+.+.|||+|.+|
T Consensus 107 ~a~~aGvdvI~id~a~----G~~--------~~~~e~I~~ir~~~~~~~Vi~-G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 107 ALRDAGADFFCVDVAH----AHA--------KYVGKTLKSLRQLLGSRCIMA-GNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHTTCCEEEEECSC----CSS--------HHHHHHHHHHHHHHTTCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHcCCCEEEEeCCC----CCc--------HhHHHHHHHHHHhcCCCeEEE-cCcCCHHHHHHHHHcCCCEEEEc
Confidence 3456899999997422 111 112667777777767889887 67999999999999999999985
No 276
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=95.75 E-value=0.22 Score=45.90 Aligned_cols=155 Identities=11% Similarity=0.044 Sum_probs=88.4
Q ss_pred CCChHHHHHHHHHhCCCcEEEecceeec-ccccccc---hhhhhhc----c-CCCCC-CEEEEec-C---CCHHHHHHHH
Q 017176 18 DWTDNHYRTLARLISKHAWLYTEMLAAE-TIIYQQG---NLDRFLA----F-SPEQH-PIVLQIG-G---SNLDNLAKAT 83 (376)
Q Consensus 18 ~~td~~~r~~~~~~Gg~gl~~te~v~~~-~~~~~~~---~~~~~~~----~-~~~~~-p~~vQL~-g---~~~~~~~~aa 83 (376)
+.-|..+.+++.+.| ++.+.++-.... .+.+.+. ..+.++. + ...+. ++++-+- | .+++...+.|
T Consensus 23 tayDa~sA~l~e~aG-~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na 101 (275)
T 1o66_A 23 TAYESSFAALMDDAG-VEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAA 101 (275)
T ss_dssp ECCSHHHHHHHHHTT-CCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHHHH
T ss_pred eCcCHHHHHHHHHcC-CCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHHHH
Confidence 567999999988886 888877632221 1111111 1112111 1 11233 3444442 2 3688888877
Q ss_pred HHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCC---------C----CCCcc
Q 017176 84 ELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIG---------V----DDHDS 150 (376)
Q Consensus 84 ~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g---------~----~~~~~ 150 (376)
.++.++|+++|.|--| +...+.|+++.+ .++||.--+.+- + .+ +.
T Consensus 102 ~rl~kaGa~aVklEdg--------------------~e~~~~I~al~~-agIpV~gHiGLtPQs~~~~ggf~v~grt-~~ 159 (275)
T 1o66_A 102 AELMAAGAHMVKLEGG--------------------VWMAETTEFLQM-RGIPVCAHIGLTPQSVFAFGGYKVQGRG-GK 159 (275)
T ss_dssp HHHHHTTCSEEEEECS--------------------GGGHHHHHHHHH-TTCCEEEEEESCGGGTTC------------C
T ss_pred HHHHHcCCcEEEECCc--------------------HHHHHHHHHHHH-cCCCeEeeeccCceeecccCCeEEEeCh-HH
Confidence 7777799999988533 123444555544 367876333221 0 11 22
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecC
Q 017176 151 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG 215 (376)
Q Consensus 151 ~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGg 215 (376)
.+++++. ++.++++|++.|.+.+-. -+..+++.++. ++|+|+-|.
T Consensus 160 a~~~i~r-A~a~~eAGA~~ivlE~vp------------------~~~a~~it~~l-~iP~igIGa 204 (275)
T 1o66_A 160 AQALLND-AKAHDDAGAAVVLMECVL------------------AELAKKVTETV-SCPTIGIGA 204 (275)
T ss_dssp HHHHHHH-HHHHHHTTCSEEEEESCC------------------HHHHHHHHHHC-SSCEEEESS
T ss_pred HHHHHHH-HHHHHHcCCcEEEEecCC------------------HHHHHHHHHhC-CCCEEEECC
Confidence 4556554 456788999999987632 23455666765 899998764
No 277
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=95.66 E-value=0.2 Score=44.96 Aligned_cols=143 Identities=13% Similarity=0.066 Sum_probs=79.9
Q ss_pred CCCEEEEec-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEec
Q 017176 64 QHPIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 142 (376)
Q Consensus 64 ~~p~~vQL~-g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR 142 (376)
+.++++=+- +..|+....+++.+.++|+|.|.+|.-+ | .+-+...++.+++. +.-|++=..
T Consensus 64 g~~v~lD~Kl~DipnTv~~~~~~~~~~gad~vtvh~~~-----------G------~~~l~~~~~~~~~~-g~~v~vLt~ 125 (228)
T 3m47_A 64 GCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFP-----------G------ADSVRACLNVAEEM-GREVFLLTE 125 (228)
T ss_dssp CCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTT-----------C------HHHHHHHHHHHHHH-TCEEEEECC
T ss_pred CCeEEEEEeecccHhHHHHHHHHHHhCCCCEEEEeccC-----------C------HHHHHHHHHHHHhc-CCCeEEEEe
Confidence 455665553 3456777777787888999999998421 2 12344445544332 233554333
Q ss_pred CCCCCC-ccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCC-CeEEEecCCCCH-
Q 017176 143 IGVDDH-DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPD-LTFTLNGGINTV- 219 (376)
Q Consensus 143 ~g~~~~-~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~-ipVi~nGgI~s~- 219 (376)
..-.+. +.+.+....++++..+.|++.+.+++.. .+.+.++++..++ .++ ..+||.-.
T Consensus 126 ~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~at~------------------~~e~~~ir~~~~~~~~i-v~PGI~~~g 186 (228)
T 3m47_A 126 MSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTR------------------PERLSRLREIIGQDSFL-ISPGVGAQG 186 (228)
T ss_dssp CCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCSSC------------------HHHHHHHHHHHCSSSEE-EECC-----
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhCCcEEEECCCC------------------hHHHHHHHHhcCCCCEE-EecCcCcCC
Confidence 321111 1233445556677778999988765421 1233445444433 544 77777532
Q ss_pred HHHHHHHHcCcCeeEEchHHhhCCc
Q 017176 220 DEVNAALRKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 220 ~da~~~l~~Gad~VmiGRa~l~~P~ 244 (376)
.+. ++++.|+|.+.+||+++..+.
T Consensus 187 ~~p-~~~~aGad~iVvGr~I~~a~d 210 (228)
T 3m47_A 187 GDP-GETLRFADAIIVGRSIYLADN 210 (228)
T ss_dssp -----CGGGTCSEEEECHHHHTSSC
T ss_pred CCH-hHHHcCCCEEEECHHHhCCCC
Confidence 255 677789999999999987655
No 278
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=95.65 E-value=0.54 Score=43.40 Aligned_cols=147 Identities=12% Similarity=0.111 Sum_probs=91.8
Q ss_pred cCCCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEE
Q 017176 60 FSPEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVS 138 (376)
Q Consensus 60 ~~~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~ 138 (376)
+......+.+.|.+.+.++....++.+.+.|+|.||+=..+ +.. ..+.+.+.+.+..+|+.+ ++|+.
T Consensus 35 ~g~g~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~----------l~~--~~~~~~v~~~l~~lr~~~~~~PiI 102 (276)
T 3o1n_A 35 VGEGAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDH----------FAN--VTTAESVLEAAGAIREIITDKPLL 102 (276)
T ss_dssp ETSSSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGG----------CTT--TTCHHHHHHHHHHHHHHCCSSCEE
T ss_pred eCCCCcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEecc----------ccc--cCcHHHHHHHHHHHHHhcCCCCEE
Confidence 33344457899999999999999998888899999995422 110 124578889999999887 78999
Q ss_pred EEecCCCCCC---ccHHHHHHHHHHHhhcCC-ccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHH---hhCCCCeEE
Q 017176 139 VKCRIGVDDH---DSYNQLCDFIYKVSSLSP-TRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALL---RDFPDLTFT 211 (376)
Q Consensus 139 vKiR~g~~~~---~~~~~~~~~i~~~~e~~G-vd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~---~~~~~ipVi 211 (376)
+-+|.-++.. .+-++-.+++..++ +.| +|+|.|--... -+.+.+++ ++ .++.||
T Consensus 103 ~T~Rt~~eGG~~~~~~~~~~~ll~~~l-~~g~~dyIDvEl~~~-----------------~~~~~~l~~~a~~-~~~kvI 163 (276)
T 3o1n_A 103 FTFRSAKEGGEQALTTGQYIDLNRAAV-DSGLVDMIDLELFTG-----------------DDEVKATVGYAHQ-HNVAVI 163 (276)
T ss_dssp EECCBGGGTCSBCCCHHHHHHHHHHHH-HHTCCSEEEEEGGGC-----------------HHHHHHHHHHHHH-TTCEEE
T ss_pred EEEEEhhhCCCCCCCHHHHHHHHHHHH-hcCCCCEEEEECcCC-----------------HHHHHHHHHHHHh-CCCEEE
Confidence 9888733211 12223333444444 467 99999974321 12233332 22 267888
Q ss_pred Ee----cCCCCHHHHHHHH----HcCcCeeEEch
Q 017176 212 LN----GGINTVDEVNAAL----RKGAHHVMVGR 237 (376)
Q Consensus 212 ~n----GgI~s~~da~~~l----~~Gad~VmiGR 237 (376)
++ .+--+.+++.+.+ +.|||.|=|+.
T Consensus 164 ~S~Hdf~~tP~~~el~~~~~~~~~~GaDIvKia~ 197 (276)
T 3o1n_A 164 MSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAV 197 (276)
T ss_dssp EEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred EEeecCCCCcCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 86 2333445554433 36888776543
No 279
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=95.59 E-value=0.31 Score=44.88 Aligned_cols=124 Identities=12% Similarity=0.050 Sum_probs=77.1
Q ss_pred ccCCCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccE
Q 017176 59 AFSPEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPV 137 (376)
Q Consensus 59 ~~~~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv 137 (376)
+.+..+.|+ +-+...|. -.|++++++|||.| +-..+-. .+. .| |-..+.-..+.+..-+++|++.+ ..||
T Consensus 23 ~~~~~g~~i-~m~tayDa----~sA~l~e~aG~d~i-lvGdSl~-~~~-lG-~~dt~~vtldem~~h~~aV~r~~~~~~v 93 (275)
T 3vav_A 23 AMREAGEKI-AMLTCYDA----SFAALLDRANVDVQ-LIGDSLG-NVL-QG-QTTTLPVTLDDIAYHTACVARAQPRALI 93 (275)
T ss_dssp HHHHHTCCE-EEEECCSH----HHHHHHHHTTCSEE-EECTTHH-HHT-TC-CSSSTTCCHHHHHHHHHHHHHTCCSSEE
T ss_pred HHHHCCCcE-EEEeCcCH----HHHHHHHHcCCCEE-EECcHHH-HHH-cC-CCCCCccCHHHHHHHHHHHHhcCCCCCE
Confidence 333445554 34556664 47788999999999 4322211 111 11 22223345677888888888877 4789
Q ss_pred EEEecCC-CCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEe
Q 017176 138 SVKCRIG-VDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN 213 (376)
Q Consensus 138 ~vKiR~g-~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~n 213 (376)
.+-+-.| +. +.++.++.+.++.+ +|+++|.+-++... .+.++.+.+. .|||++.
T Consensus 94 vaD~pfgsY~---s~~~a~~~a~rl~k-aGa~aVklEdg~~~----------------~~~i~~l~~~--GIpv~gH 148 (275)
T 3vav_A 94 VADLPFGTYG---TPADAFASAVKLMR-AGAQMVKFEGGEWL----------------AETVRFLVER--AVPVCAH 148 (275)
T ss_dssp EEECCTTSCS---SHHHHHHHHHHHHH-TTCSEEEEECCGGG----------------HHHHHHHHHT--TCCEEEE
T ss_pred EEecCCCCCC---CHHHHHHHHHHHHH-cCCCEEEECCchhH----------------HHHHHHHHHC--CCCEEEe
Confidence 9999885 62 34455555555554 69999999876311 4556666654 7899864
No 280
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=95.58 E-value=0.13 Score=46.68 Aligned_cols=143 Identities=14% Similarity=0.150 Sum_probs=77.2
Q ss_pred CCCEEEEec-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcc--cC--cc--
Q 017176 64 QHPIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN--TN--VP-- 136 (376)
Q Consensus 64 ~~p~~vQL~-g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~--~~--~p-- 136 (376)
+.++++-+. +..|+....+++.+.++|+|.|.+|.-. | .+.+.+.++.+++. .+ .|
T Consensus 55 ~~~v~lD~kl~Dip~t~~~~~~~~~~~Gad~vTvH~~~-----------g------~~~l~~~~~~~~~~~~~G~~~~~~ 117 (246)
T 2yyu_A 55 GHAVFLDLKLHDIPNTVKQAMKGLARVGADLVNVHAAG-----------G------RRMMEAAIEGLDAGTPSGRMRPRC 117 (246)
T ss_dssp TCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGGG-----------C------HHHHHHHHHHHHHHSCSSSCCCEE
T ss_pred CCeEEEEeecccchHHHHHHHHHHHhcCCCEEEEECCC-----------C------HHHHHHHHHHHHhhcccCCcCCCE
Confidence 334444332 3567777777888889999999998511 2 12344566666541 22 24
Q ss_pred EEEEecCCCC--CC-------ccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCC
Q 017176 137 VSVKCRIGVD--DH-------DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPD 207 (376)
Q Consensus 137 v~vKiR~g~~--~~-------~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ 207 (376)
+.|......+ +. .+..+.+-.++....+.|.+.+.... .+ +.++++....
T Consensus 118 lav~~~Ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~--------------------~e-i~~lr~~~~~ 176 (246)
T 2yyu_A 118 IAVTQLTSTDERMLHEELWISRPLVETVAHYAALAKESGLDGVVCSA--------------------NE-AAFIKERCGA 176 (246)
T ss_dssp EEESSCTTCCHHHHHHTSCCCSCHHHHHHHHHHHHHHHTCCEEECCH--------------------HH-HHHHHHHHCT
T ss_pred EEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCEEEeCH--------------------HH-HHHHHHhcCC
Confidence 3333222210 00 01112221112212335555443221 23 4444443333
Q ss_pred CeEEEecCCCCH-H---------HHHHHHHcCcCeeEEchHHhhCCc
Q 017176 208 LTFTLNGGINTV-D---------EVNAALRKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 208 ipVi~nGgI~s~-~---------da~~~l~~Gad~VmiGRa~l~~P~ 244 (376)
.+++..|||..- . .+.++++.|+|.+.+||+++..+.
T Consensus 177 ~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~d 223 (246)
T 2yyu_A 177 SFLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRSLTRAAD 223 (246)
T ss_dssp TSEEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHHHHTSSS
T ss_pred CCEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHhhcCCCC
Confidence 458999999742 1 366777889999999999998655
No 281
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=95.47 E-value=0.16 Score=46.53 Aligned_cols=156 Identities=8% Similarity=0.040 Sum_probs=87.8
Q ss_pred CCChHHHHHHHHHhCCCcEEEecceeec-ccccccc---hhhhhhc----c-CCCCC-CEEEEec-CC--CHHHHHHHHH
Q 017176 18 DWTDNHYRTLARLISKHAWLYTEMLAAE-TIIYQQG---NLDRFLA----F-SPEQH-PIVLQIG-GS--NLDNLAKATE 84 (376)
Q Consensus 18 ~~td~~~r~~~~~~Gg~gl~~te~v~~~-~~~~~~~---~~~~~~~----~-~~~~~-p~~vQL~-g~--~~~~~~~aa~ 84 (376)
+.-|..+.+++.+.| ++.++++-.... .+.+.+. ..+.++. + ...+. ++++-+- |+ ++++..+.|.
T Consensus 23 tayD~~sA~l~e~aG-~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~a~ 101 (264)
T 1m3u_A 23 TAYDYSFAKLFADEG-LNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAA 101 (264)
T ss_dssp ECCSHHHHHHHHHHT-CCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHHHH
T ss_pred eCcCHHHHHHHHHcC-CCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHHHH
Confidence 566999999988886 888887632221 1111111 1112111 1 11233 3444432 21 7887777777
Q ss_pred HHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecC---------CC----CCCccH
Q 017176 85 LANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI---------GV----DDHDSY 151 (376)
Q Consensus 85 ~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~---------g~----~~~~~~ 151 (376)
++.++|+++|.|--| +...+.|+++.+ .++||.--+-+ |+ .+....
T Consensus 102 rl~kaGa~aVklEgg--------------------~e~~~~I~al~~-agipV~gHiGLtPq~v~~~ggf~v~grt~~~a 160 (264)
T 1m3u_A 102 TVMRAGANMVKIEGG--------------------EWLVETVQMLTE-RAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAG 160 (264)
T ss_dssp HHHHTTCSEEECCCS--------------------GGGHHHHHHHHH-TTCCEEEEEESCGGGHHHHTSSCCCCCSHHHH
T ss_pred HHHHcCCCEEEECCc--------------------HHHHHHHHHHHH-CCCCeEeeecCCceeecccCCeEEEeCCHHHH
Confidence 777799999987432 123445555544 36787622211 11 111223
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecC
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG 215 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGg 215 (376)
+++++. ++.++++|++.|.+.+-. -+..+++.++. ++|+|+-|.
T Consensus 161 ~~~i~r-A~a~~eAGA~~ivlE~vp------------------~~~a~~it~~l-~iP~igIGa 204 (264)
T 1m3u_A 161 DQLLSD-ALALEAAGAQLLVLECVP------------------VELAKRITEAL-AIPVIGIGA 204 (264)
T ss_dssp HHHHHH-HHHHHHHTCCEEEEESCC------------------HHHHHHHHHHC-SSCEEEESS
T ss_pred HHHHHH-HHHHHHCCCcEEEEecCC------------------HHHHHHHHHhC-CCCEEEeCC
Confidence 555554 456788999999988632 23455666665 899998764
No 282
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=95.43 E-value=0.25 Score=47.61 Aligned_cols=132 Identities=14% Similarity=0.095 Sum_probs=89.6
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccC---ccEEEEec
Q 017176 66 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN---VPVSVKCR 142 (376)
Q Consensus 66 p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~---~pv~vKiR 142 (376)
|+-..+.+.+++.+.+.++.+.+.||..+-+..|. .+++.-.+.++++++.++ +.+.+-..
T Consensus 153 p~~~~i~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~----------------~~~~~d~~~v~avr~~~g~~~~~l~vDaN 216 (377)
T 2pge_A 153 PVNGLIWMGEAAFMQEQIEAKLAEGYGCLKLKIGA----------------IDFDKECALLAGIRESFSPQQLEIRVDAN 216 (377)
T ss_dssp EBCEEECCCCHHHHHHHHHHHHHTTCSEEEEEC-------------------CHHHHHHHHHHHHHHSCTTTCEEEEECT
T ss_pred EEeEEecCCCHHHHHHHHHHHHHHhhhhheeecCC----------------CChHHHHHHHHHHHHHcCCCCceEEEECC
Confidence 33334556688989888888888899999886432 246677788888888764 55666655
Q ss_pred CCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHH-
Q 017176 143 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE- 221 (376)
Q Consensus 143 ~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~d- 221 (376)
-+|+. + +.++++ +.+++.++.+|. . .+++-+++..+++.+.. ++||.+.=.+.+..+
T Consensus 217 ~~~~~-~---~a~~~~-~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~ 274 (377)
T 2pge_A 217 GAFSP-A---NAPQRL-KRLSQFHLHSIE----Q------------PIRQHQWSEMAALCANS-PLAIALDEELIGLGAE 274 (377)
T ss_dssp TBBCT-T---THHHHH-HHHHTTCCSEEE----C------------CBCSSCHHHHHHHHHHC-SSCEEESGGGTTCCTH
T ss_pred CCCCH-H---HHHHHH-HHHhcCCCcEEE----c------------cCCcccHHHHHHHHhhC-CCcEEECCccCCcchH
Confidence 56654 2 333333 455678887765 1 11223477777777765 899999988988888
Q ss_pred -HHHHHH-cCcCeeEE
Q 017176 222 -VNAALR-KGAHHVMV 235 (376)
Q Consensus 222 -a~~~l~-~Gad~Vmi 235 (376)
+.++++ ..+|.|++
T Consensus 275 ~~~~~i~~~a~d~i~i 290 (377)
T 2pge_A 275 QRSAMLDAIRPQYIIL 290 (377)
T ss_dssp HHHHHHHHHCCSEEEE
T ss_pred HHHHHHHhCCCCEEEE
Confidence 668887 67898877
No 283
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=95.37 E-value=0.16 Score=49.28 Aligned_cols=120 Identities=11% Similarity=0.151 Sum_probs=81.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccHH
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~ 152 (376)
.+++++.+.++.+.+.||+.+-+..| | ..+ .+.+++||+.+ ++.+.+-..-+|+. +
T Consensus 160 ~~~e~~~~~a~~~~~~G~~~~KiKvg-~--------------~~d----~~~v~avr~a~~~~~l~vDaN~~~~~-~--- 216 (393)
T 1wuf_A 160 QNVETLLQLVNQYVDQGYERVKLKIA-P--------------NKD----IQFVEAVRKSFPKLSLMADANSAYNR-E--- 216 (393)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEEECB-T--------------TBS----HHHHHHHHTTCTTSEEEEECTTCCCG-G---
T ss_pred CCHHHHHHHHHHHHHHhhHhheeccC-h--------------HHH----HHHHHHHHHHcCCCEEEEECCCCCCH-H---
Confidence 46888988888887889999998653 1 012 35577888776 34555555555643 2
Q ss_pred HHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcC
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAH 231 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad 231 (376)
+. ++ .+.+++.++.+|. . .+++-+++..+++.+.. ++||.+.-.+.+.+++.++++ ..+|
T Consensus 217 ~a-~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~a~d 277 (393)
T 1wuf_A 217 DF-LL-LKELDQYDLEMIE----Q------------PFGTKDFVDHAWLQKQL-KTRICLDENIRSVKDVEQAHSIGSCR 277 (393)
T ss_dssp GH-HH-HHTTGGGTCSEEE----C------------CSCSSCSHHHHHHHTTC-SSEEEECTTCCSHHHHHHHHHHTCCS
T ss_pred HH-HH-HHHHHhCCCeEEE----C------------CCCCcCHHHHHHHHHhC-CCCEEECCCcCCHHHHHHHHHhCCCC
Confidence 33 33 3456778888776 1 11222356667776654 899999999999999999998 4589
Q ss_pred eeEE
Q 017176 232 HVMV 235 (376)
Q Consensus 232 ~Vmi 235 (376)
.|++
T Consensus 278 ~v~i 281 (393)
T 1wuf_A 278 AINL 281 (393)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9887
No 284
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=95.33 E-value=0.34 Score=44.22 Aligned_cols=190 Identities=14% Similarity=0.086 Sum_probs=112.8
Q ss_pred CCCCChHHHHHHHHHhCCCcEEEecc--eeecccccccc---hhhhhhc----c-CCCCCCEEEEe---cCCCHHHHHHH
Q 017176 16 MMDWTDNHYRTLARLISKHAWLYTEM--LAAETIIYQQG---NLDRFLA----F-SPEQHPIVLQI---GGSNLDNLAKA 82 (376)
Q Consensus 16 M~~~td~~~r~~~~~~Gg~gl~~te~--v~~~~~~~~~~---~~~~~~~----~-~~~~~p~~vQL---~g~~~~~~~~a 82 (376)
|.+.-|....+++.+.| +..+++.- ++ ..+.+.+. ....++. + ...+.|+++-+ +|+.+ .+.
T Consensus 24 ~~~ayD~~sA~~~~~aG-~dai~vg~~s~a-~~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~~~Gyg~~~---~~~ 98 (255)
T 2qiw_A 24 LPTVWDTWSAGLVEEAG-FSGLTIGSHPVA-DATGSSDGENMNFADYMAVVKKITSAVSIPVSVDVESGYGLSP---ADL 98 (255)
T ss_dssp CCEESSHHHHHHHHHTT-CSCEEECHHHHH-HHTTCCTTTCSCHHHHHHHHHHHHHHCSSCEEEECTTCTTCCH---HHH
T ss_pred EecCcCHHHHHHHHHcC-CCEEEEChHHHH-HhCCCCCCCCcCHHHHHHHHHHHHhcCCCCEEeccCCCcCcHH---HHH
Confidence 44677888988888876 77777663 33 12222221 0111110 0 11236777765 45556 677
Q ss_pred HHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc---CccEEEEecCC-----CCC-CccHHH
Q 017176 83 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT---NVPVSVKCRIG-----VDD-HDSYNQ 153 (376)
Q Consensus 83 a~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~---~~pv~vKiR~g-----~~~-~~~~~~ 153 (376)
++++.++|+++|.|--+... . |. -+-..+...+.|+++++.. ++|+.|--|.+ ..+ .+..++
T Consensus 99 ~~~l~~aGa~gv~iEd~~~~-------~-~k-~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ 169 (255)
T 2qiw_A 99 IAQILEAGAVGINVEDVVHS-------E-GK-RVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVE 169 (255)
T ss_dssp HHHHHHTTCCEEEECSEEGG-------G-TT-EECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHH
T ss_pred HHHHHHcCCcEEEECCCCCC-------C-CC-cccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHH
Confidence 77777899999999755311 0 22 2335566677777776652 57865555543 221 123667
Q ss_pred HHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEe--cCCCCH-HHHHHHHHcCc
Q 017176 154 LCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN--GGINTV-DEVNAALRKGA 230 (376)
Q Consensus 154 ~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~n--GgI~s~-~da~~~l~~Ga 230 (376)
+++. ++.++++|+|.|.+++-.. .+.+.++.+++ ++|+-.+ ++-.++ -+..++-+.|+
T Consensus 170 ai~r-a~a~~eAGAd~i~~e~~~~-----------------~~~~~~i~~~~-~~P~n~~~~~~~~~p~~~~~eL~~lGv 230 (255)
T 2qiw_A 170 AIKR-IKLMEQAGARSVYPVGLST-----------------AEQVERLVDAV-SVPVNITAHPVDGHGAGDLATLAGLGV 230 (255)
T ss_dssp HHHH-HHHHHHHTCSEEEECCCCS-----------------HHHHHHHHTTC-SSCBEEECBTTTBBTTBCHHHHHHTTC
T ss_pred HHHH-HHHHHHcCCcEEEEcCCCC-----------------HHHHHHHHHhC-CCCEEEEecCCCCCCCCCHHHHHHcCC
Confidence 6665 3566789999999987321 35566777765 7887666 332111 23445556899
Q ss_pred CeeEEchH
Q 017176 231 HHVMVGRA 238 (376)
Q Consensus 231 d~VmiGRa 238 (376)
..|..|-.
T Consensus 231 ~~v~~~~~ 238 (255)
T 2qiw_A 231 RRVTFGPL 238 (255)
T ss_dssp CEEECTTH
T ss_pred CEEEEHHH
Confidence 99998877
No 285
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=95.26 E-value=0.14 Score=47.92 Aligned_cols=101 Identities=16% Similarity=0.147 Sum_probs=62.3
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecC-CCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 63 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNC-GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 63 ~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~-gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
.+.|++ =+...|. -.|++++++|||.|=+.. +.-.. .. | |-....-..+.+...++.|.+.++.||++-+
T Consensus 20 ~~~~i~-~~~a~D~----~sA~l~e~aGf~ai~vs~~s~a~~-~~--G-~pD~~~vt~~em~~~~~~I~r~~~~PviaD~ 90 (298)
T 3eoo_A 20 AEQPLQ-VVGAITA----YAAKMAEAVGFKAVYLSGGGVAAN-SL--G-IPDLGISTMDDVLVDANRITNATNLPLLVDI 90 (298)
T ss_dssp HSSSEE-EEECSSH----HHHHHHHHHTCSCEEECHHHHHHH-TT--C-CCSSSCCCHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred CCCcEE-EecCCCH----HHHHHHHHcCCCEEEECcHHHHHH-hc--C-CCCCCCCCHHHHHHHHHHHHhhcCCeEEEEC
Confidence 344443 2445554 366778889999998753 11100 01 1 1111123467777888888888899999999
Q ss_pred cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCc
Q 017176 142 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK 176 (376)
Q Consensus 142 R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~ 176 (376)
-.|+.+ .+.+.+.+. .++++|+++|++-+..
T Consensus 91 d~Gyg~---~~~v~~~v~-~l~~aGaagv~iEDq~ 121 (298)
T 3eoo_A 91 DTGWGG---AFNIARTIR-SFIKAGVGAVHLEDQV 121 (298)
T ss_dssp TTCSSS---HHHHHHHHH-HHHHTTCSEEEEECBC
T ss_pred CCCCCC---HHHHHHHHH-HHHHhCCeEEEECCCC
Confidence 999753 233344333 3456999999998765
No 286
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=95.21 E-value=0.1 Score=47.36 Aligned_cols=142 Identities=15% Similarity=0.146 Sum_probs=77.7
Q ss_pred CCEEEEec-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccC-cc--EEEE
Q 017176 65 HPIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VP--VSVK 140 (376)
Q Consensus 65 ~p~~vQL~-g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~-~p--v~vK 140 (376)
.++++-+. +..|+....+++.+.++|+|.|.+|.-. | .+-+...++.+++.-. .| +.|.
T Consensus 66 ~~v~lD~kl~Dip~t~~~~i~~~~~~Gad~vTvH~~~-----------g------~~~l~~~~~~~~~~G~~~~~~l~v~ 128 (245)
T 1eix_A 66 FDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASG-----------G------ARMMTAAREALVPFGKDAPLLIAVT 128 (245)
T ss_dssp CCEEEEEEECSCHHHHHHHHHHHHHHTCSEEEEBGGG-----------C------HHHHHHHHHTTGGGGGGCCEEEEEC
T ss_pred CcEEEEeeccccHHHHHHHHHHHHhCCCCEEEEeccC-----------C------HHHHHHHHHHHHHcCCCCCcEEEEE
Confidence 34444332 3567777777888888999999998521 2 1224455665554211 23 1232
Q ss_pred ecCCCCC--C------ccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE
Q 017176 141 CRIGVDD--H------DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL 212 (376)
Q Consensus 141 iR~g~~~--~------~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~ 212 (376)
.....+. . .+..+.+-.++....+.|.+.+.... ++ +.++++...+.+++.
T Consensus 129 ~~ts~~~~~l~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~--------------------~e-i~~lr~~~~~~~i~v 187 (245)
T 1eix_A 129 VLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSA--------------------QE-AVRFKQVFGQEFKLV 187 (245)
T ss_dssp SCTTCCHHHHHTTTCCSCHHHHHHHHHHHHHHTTCSEEECCG--------------------GG-HHHHHHHHCSSSEEE
T ss_pred ecCCCCHHHHHHhccCCCHHHHHHHHHHHHHHcCCCeEEeCH--------------------HH-HHHHHHhcCCCCEEE
Confidence 2222110 0 01122222222223446666544322 12 334443333468999
Q ss_pred ecCCCCHH----------HHHHHHHcCcCeeEEchHHhhCCc
Q 017176 213 NGGINTVD----------EVNAALRKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 213 nGgI~s~~----------da~~~l~~Gad~VmiGRa~l~~P~ 244 (376)
.|||..-. .+.++++.|+|.+.+||+++..+.
T Consensus 188 ~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~d 229 (245)
T 1eix_A 188 TPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVD 229 (245)
T ss_dssp ECCBCCTTCCCTTCCSCBCHHHHHHTTCSEEEECHHHHTSSS
T ss_pred ECCcCCCCCCccchhccCCHHHHHHcCCCEEEECHHHcCCCC
Confidence 99997431 467778899999999999998665
No 287
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=95.20 E-value=0.025 Score=49.22 Aligned_cols=43 Identities=16% Similarity=0.185 Sum_probs=35.8
Q ss_pred HHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCC
Q 017176 200 ALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 243 (376)
Q Consensus 200 ~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P 243 (376)
+++++..++|||+.|+|+|.+++.+ ++.|||+|.-++--|.+-
T Consensus 142 ~~I~~v~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~~LW~~ 184 (188)
T 1vkf_A 142 KVARKIPGRTVIAAGLVETEEEARE-ILKHVSAISTSSRILWKM 184 (188)
T ss_dssp HHHTTSTTSEEEEESCCCSHHHHHH-HTTTSSEEEECCHHHHTC
T ss_pred HHHHHhcCCCEEEECCcCCHHHHHH-HHCCCeEEEeCCHHHhCC
Confidence 3344445899999999999999999 999999999998776543
No 288
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=95.19 E-value=0.88 Score=40.95 Aligned_cols=146 Identities=11% Similarity=0.108 Sum_probs=84.1
Q ss_pred CEEEEecC-CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecC
Q 017176 66 PIVLQIGG-SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRI 143 (376)
Q Consensus 66 p~~vQL~g-~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~ 143 (376)
.+++-|.+ .+.+++.+.++.+.+.|+|.||+=..+ +.. .+.+.+.+.++.+|+.. ++|+.+-+|.
T Consensus 5 ~Icvpi~~~~~~~e~~~~~~~~~~~~~D~vElRvD~----------l~~---~~~~~v~~~~~~lr~~~~~~PiI~T~R~ 71 (238)
T 1sfl_A 5 EVVATITPQLSIEETLIQKINHRIDAIDVLELRIDQ----------FEN---VTVDQVAEMITKLKVMQDSFKLLVTYRT 71 (238)
T ss_dssp EEEEEECCCC---CHHHHHHHHTTTTCSEEEEECTT----------STT---CCHHHHHHHHHHHC---CCSEEEEECCB
T ss_pred eEEEEecCCCCHHHHHHHHHHhhhcCCCEEEEEecc----------ccc---CCHHHHHHHHHHHHHhccCCCEEEEeec
Confidence 47788899 888888888888888899999995432 211 14678899999999877 7899998887
Q ss_pred CCCCC---ccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecC----C
Q 017176 144 GVDDH---DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG----I 216 (376)
Q Consensus 144 g~~~~---~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGg----I 216 (376)
-++.. .+-++-.+.+..+++..++|+|.|.-.... . .-....+.+..+.. ++.||++=- -
T Consensus 72 ~~eGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~~--~----------~~~~~~l~~~~~~~-~~kvI~S~Hdf~~t 138 (238)
T 1sfl_A 72 KLQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQADI--D----------IEKHQRIITHLQQY-NKEVIISHHNFEST 138 (238)
T ss_dssp GGGTSCBCCCHHHHHHHHHHGGGCTTCCEEEEECCTTS--C----------HHHHHHHHHHHHHT-TCEEEEEEEESSCC
T ss_pred cccCCCCCCCHHHHHHHHHHHHHhCCCCEEEEEccCCC--C----------hHHHHHHHHHHHhc-CCEEEEEecCCCCC
Confidence 44321 122333444555554447999999753200 0 00011121222222 677887732 2
Q ss_pred CCHHHHHHHH----HcCcCeeEEch
Q 017176 217 NTVDEVNAAL----RKGAHHVMVGR 237 (376)
Q Consensus 217 ~s~~da~~~l----~~Gad~VmiGR 237 (376)
-+.+++.+.+ +.|||.|=|+.
T Consensus 139 p~~~el~~~~~~~~~~gaDivKia~ 163 (238)
T 1sfl_A 139 PPLDELQFIFFKMQKFNPEYVKLAV 163 (238)
T ss_dssp CCHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 3345554443 37899776644
No 289
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=95.13 E-value=0.15 Score=45.46 Aligned_cols=78 Identities=18% Similarity=0.204 Sum_probs=58.3
Q ss_pred cEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecC
Q 017176 136 PVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG 215 (376)
Q Consensus 136 pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGg 215 (376)
|+..=+|. ++.++...+ ++.+.+.|++.|.|.-++.. ..+.++++++++++ ++|+.|-
T Consensus 14 ~vi~Vir~--~~~~~a~~~----a~al~~gGi~~iEvt~~t~~---------------a~~~I~~l~~~~p~-~~IGAGT 71 (217)
T 3lab_A 14 PLIPVIVI--DDLVHAIPM----AKALVAGGVHLLEVTLRTEA---------------GLAAISAIKKAVPE-AIVGAGT 71 (217)
T ss_dssp SEEEEECC--SCGGGHHHH----HHHHHHTTCCEEEEETTSTT---------------HHHHHHHHHHHCTT-SEEEEEC
T ss_pred CEEEEEEc--CCHHHHHHH----HHHHHHcCCCEEEEeCCCcc---------------HHHHHHHHHHHCCC-CeEeecc
Confidence 55555665 333333333 44556799999999776531 26788888888866 7999999
Q ss_pred CCCHHHHHHHHHcCcCeeEE
Q 017176 216 INTVDEVNAALRKGAHHVMV 235 (376)
Q Consensus 216 I~s~~da~~~l~~Gad~Vmi 235 (376)
|.|.++++++++.||++++.
T Consensus 72 Vlt~~~a~~ai~AGA~fivs 91 (217)
T 3lab_A 72 VCTADDFQKAIDAGAQFIVS 91 (217)
T ss_dssp CCSHHHHHHHHHHTCSEEEE
T ss_pred ccCHHHHHHHHHcCCCEEEe
Confidence 99999999999999999876
No 290
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=95.09 E-value=0.076 Score=50.54 Aligned_cols=93 Identities=16% Similarity=0.224 Sum_probs=59.9
Q ss_pred HHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCC--ccEEEEccCccccCCCCCCCCCCCCcccHHHH
Q 017176 121 FVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSP--TRHFIIHSRKALLNGISPAENRTIPPLKYEYY 198 (376)
Q Consensus 121 ~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~G--vd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v 198 (376)
...+.++.+++ .+.|+++.+ |... +.+ +. ++.+.+.| +++|.++.. .|. +...++.+
T Consensus 82 ~~~~~i~~~~~-~g~~v~v~~--g~~~-~~~----~~-a~~~~~~g~~~~~i~i~~~----~G~--------~~~~~~~i 140 (336)
T 1ypf_A 82 KRISFIRDMQS-RGLIASISV--GVKE-DEY----EF-VQQLAAEHLTPEYITIDIA----HGH--------SNAVINMI 140 (336)
T ss_dssp GHHHHHHHHHH-TTCCCEEEE--CCSH-HHH----HH-HHHHHHTTCCCSEEEEECS----SCC--------SHHHHHHH
T ss_pred HHHHHHHHHHh-cCCeEEEeC--CCCH-HHH----HH-HHHHHhcCCCCCEEEEECC----CCC--------cHHHHHHH
Confidence 34555666554 256777763 4332 222 22 22344678 999888642 121 22347788
Q ss_pred HHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEE
Q 017176 199 YALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 235 (376)
Q Consensus 199 ~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~Vmi 235 (376)
..+++..+.+||+ .|.|.+.++++.+.+.|||+|.+
T Consensus 141 ~~lr~~~~~~~vi-~G~v~s~e~A~~a~~aGad~Ivv 176 (336)
T 1ypf_A 141 QHIKKHLPESFVI-AGNVGTPEAVRELENAGADATKV 176 (336)
T ss_dssp HHHHHHCTTSEEE-EEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHhCCCCEEE-ECCcCCHHHHHHHHHcCCCEEEE
Confidence 8888876445555 57799999999999999999999
No 291
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=95.08 E-value=0.22 Score=44.22 Aligned_cols=134 Identities=14% Similarity=0.129 Sum_probs=75.5
Q ss_pred CCCCEEEEec-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 63 EQHPIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 63 ~~~p~~vQL~-g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
.+.++++=+- +--+.....+++.+.++|+|.|.+|. |++ .+-+...++... ..-+.|-.
T Consensus 57 ~~~~v~lD~K~~DI~nT~~~~v~~~~~~GaD~vTvh~------------~~G-----~~~l~~~~~~~~---~~~~~V~~ 116 (213)
T 1vqt_A 57 RNLKIILDLKFCDIPSTVERSIKSWDHPAIIGFTVHS------------CAG-----YESVERALSATD---KHVFVVVK 116 (213)
T ss_dssp TTCEEEEEEEECSCHHHHHHHHHHHCCTTEEEEEEEG------------GGC-----HHHHHHHHHHCS---SEEEEECC
T ss_pred CCCCEEEEeecccCchHHHHHHHHHHHCCCCEEEEec------------cCC-----HHHHHHHHHhcC---CCeEEEEE
Confidence 3566776663 33456667777888889999999984 122 122233333221 11233322
Q ss_pred cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHH-
Q 017176 142 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVD- 220 (376)
Q Consensus 142 R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~- 220 (376)
-.+.+. . +.+.+..++++ .+.|++ +.+++ +.+.++++.. ..+ +..+||.-..
T Consensus 117 lts~~~-~-l~~~v~~~a~~-~e~G~d-vV~~~---------------------~~~~~ir~~~-~~~-~v~pGI~~~~~ 169 (213)
T 1vqt_A 117 LTSMEG-S-LEDYMDRIEKL-NKLGCD-FVLPG---------------------PWAKALREKI-KGK-ILVPGIRMEVK 169 (213)
T ss_dssp CTTSCC-C-HHHHHHHHHHH-HHHTCE-EECCH---------------------HHHHHHTTTC-CSC-EEECCBC----
T ss_pred eCCCCH-H-HHHHHHHHHHH-hcCCCE-EEEcH---------------------HHHHHHHHHC-CCC-EEECCCCCCCC
Confidence 222232 1 32333445566 778999 54432 1223444433 346 7888885332
Q ss_pred --H------HHHHHHcCcCeeEEchHHhhCCc
Q 017176 221 --E------VNAALRKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 221 --d------a~~~l~~Gad~VmiGRa~l~~P~ 244 (376)
| ..+ ++.|+|++.+||+++..+.
T Consensus 170 ~~dq~rv~t~~~-i~aGad~iVvGR~I~~a~d 200 (213)
T 1vqt_A 170 ADDQKDVVTLEE-MKGIANFAVLGREIYLSEN 200 (213)
T ss_dssp -----CCBCHHH-HTTTCSEEEESHHHHTSSC
T ss_pred ccchhhcCCHHH-HHCCCCEEEEChhhcCCCC
Confidence 2 567 7899999999999997766
No 292
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=95.04 E-value=1.2 Score=39.85 Aligned_cols=138 Identities=12% Similarity=0.078 Sum_probs=78.3
Q ss_pred HHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHh
Q 017176 83 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVS 162 (376)
Q Consensus 83 a~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~ 162 (376)
+..++++|+|+|-|+.+. |+-.+| .+.+.++...+ .+.-+.|=+ .+ ..+.. .+
T Consensus 81 ~~~l~~~Ga~~Vllghse------RR~~~~--------e~~~k~~~A~~-~GL~~ivcV----ge---~~e~~-----~~ 133 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLNHSE------NRMILA--------DLEAAIRRAEE-VGLMTMVCS----NN---PAVSA-----AV 133 (225)
T ss_dssp HHHHHHTTCCEEEESCGG------GCCBHH--------HHHHHHHHHHH-HTCEEEEEE----SS---HHHHH-----HH
T ss_pred HHHHHHcCCCEEEECcch------hcCCHH--------HHHHHHHHHHH-CCCEEEEEe----CC---HHHHH-----HH
Confidence 456788999999997432 222223 13444444332 233322211 11 22221 12
Q ss_pred hcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhh
Q 017176 163 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 241 (376)
Q Consensus 163 e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~ 241 (376)
...+.+.|-+-+|...=.|.+-. ...+-..+.+.++++.. .+++|+.-|+|.+.+++..+...|+||+.||++++.
T Consensus 134 ~~~~~~iIayep~waiGtG~~v~---t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~ 210 (225)
T 1hg3_A 134 AALNPDYVAVEPPELIGTGIPVS---KAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTK 210 (225)
T ss_dssp HTTCCSEEEECCTTTTTTSCCTT---TSCTHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred hcCCCCEEEEeChhhhccCCCCC---CCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHC
Confidence 34677788888776421220000 00111123333334433 368999999999999999998899999999999998
Q ss_pred CCchhhHhhh
Q 017176 242 NPWYTLGHVD 251 (376)
Q Consensus 242 ~P~lf~~~~~ 251 (376)
-+++ ...++
T Consensus 211 a~~~-~~~i~ 219 (225)
T 1hg3_A 211 AKDP-EKAIW 219 (225)
T ss_dssp CSSH-HHHHH
T ss_pred CcCH-HHHHH
Confidence 8774 44433
No 293
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=94.99 E-value=1.8 Score=39.34 Aligned_cols=99 Identities=16% Similarity=0.137 Sum_probs=68.9
Q ss_pred CCC-EEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEe
Q 017176 64 QHP-IVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKC 141 (376)
Q Consensus 64 ~~p-~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKi 141 (376)
+.| +++-|.+.+.+++.+.++.+.+.|+|.||+=..+=. + ..+.+.+.+.+..+++.. ++|+.+-+
T Consensus 18 g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~------~------~~~~~~v~~~l~~lr~~~~~lPiI~T~ 85 (258)
T 4h3d_A 18 GRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFE------N------VENIKEVKEVLYELRSYIHDIPLLFTF 85 (258)
T ss_dssp SSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCT------T------TTCHHHHHHHHHHHHHHCTTSCEEEEC
T ss_pred CCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeecccc------c------cCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 444 789999999999999999999999999999543210 0 135778999999998876 68999999
Q ss_pred cCCCCCC---ccHHHHHHHHHHHhhcCCccEEEEcc
Q 017176 142 RIGVDDH---DSYNQLCDFIYKVSSLSPTRHFIIHS 174 (376)
Q Consensus 142 R~g~~~~---~~~~~~~~~i~~~~e~~Gvd~I~vh~ 174 (376)
|.-++.. .+-++-...+..+++..++|+|.|.-
T Consensus 86 Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl 121 (258)
T 4h3d_A 86 RSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVEL 121 (258)
T ss_dssp CCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEG
T ss_pred echhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHhh
Confidence 9744321 12222233334444444599999864
No 294
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=94.98 E-value=0.46 Score=42.74 Aligned_cols=143 Identities=16% Similarity=0.153 Sum_probs=79.6
Q ss_pred CCCEEEEec-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcc--cCc--c--
Q 017176 64 QHPIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN--TNV--P-- 136 (376)
Q Consensus 64 ~~p~~vQL~-g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~--~~~--p-- 136 (376)
+.++++-+. +..|+....+++.+.++|+|.|.+|.-. | .+.+...++.+++. .+. |
T Consensus 54 ~~~v~lD~kl~Dip~t~~~~~~~~~~~Gad~vtvH~~~-----------g------~~~l~~~~~~~~~~~~~g~~~~~~ 116 (239)
T 1dbt_A 54 NCELFLDLKLHDIPTTVNKAMKRLASLGVDLVNVHAAG-----------G------KKMMQAALEGLEEGTPAGKKRPSL 116 (239)
T ss_dssp TCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGG-----------C------HHHHHHHHHHHHHHSCTTSCCCEE
T ss_pred CCcEEEEeccccchHHHHHHHHHHHhcCCCEEEEeCcC-----------C------HHHHHHHHHHHHhhhccCCCCccE
Confidence 344444332 3567777777888889999999998511 2 12234555555543 132 3
Q ss_pred EEEEecCCCC--CC-----c--cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCC
Q 017176 137 VSVKCRIGVD--DH-----D--SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPD 207 (376)
Q Consensus 137 v~vKiR~g~~--~~-----~--~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ 207 (376)
+.|-...+.+ +. - +..+.+..++....+.|.+.+.... . .+.++++...+
T Consensus 117 ~~V~~~ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~v~~~-~--------------------~i~~lr~~~~~ 175 (239)
T 1dbt_A 117 IAVTQLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVVCSV-H--------------------EAKAIYQAVSP 175 (239)
T ss_dssp EEECSCTTCCHHHHHHTSCBCSCHHHHHHHHHHHHHHTTCSEEECCG-G--------------------GHHHHTTTSCT
T ss_pred EEEEEcCCCCHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCEEEECH-H--------------------HHHHHHHhcCC
Confidence 4444333321 00 0 1222222222223456766655443 1 12233333334
Q ss_pred CeEEEecCCCCHHH----------HHHHHHcCcCeeEEchHHhhCCc
Q 017176 208 LTFTLNGGINTVDE----------VNAALRKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 208 ipVi~nGgI~s~~d----------a~~~l~~Gad~VmiGRa~l~~P~ 244 (376)
.+++..|||.--.. ..++++.|+|.+.+||+++..|.
T Consensus 176 ~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVvGr~I~~a~d 222 (239)
T 1dbt_A 176 SFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVGRSITKAED 222 (239)
T ss_dssp TCEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEECHHHHTSSC
T ss_pred CcEEEeCCcCCCCCCccceeccCCHHHHHHcCCCEEEEChhhcCCCC
Confidence 68999999975332 26777899999999999998665
No 295
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=94.98 E-value=1.3 Score=39.56 Aligned_cols=178 Identities=8% Similarity=0.040 Sum_probs=94.8
Q ss_pred CCCChHHHHHHHHHhCCCcEEEecceeeccccccc--chhhhhhccCCCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEE
Q 017176 17 MDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQ--GNLDRFLAFSPEQHPIVLQIGGSNLDNLAKATELANAYNYDEI 94 (376)
Q Consensus 17 ~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~--~~~~~~~~~~~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~I 94 (376)
+|+|+.+=..++ +.| ++.+ +++....--+.- ....++.... ...++.+.++. ++++ .+..+++.+.|.|
T Consensus 26 CGit~~ed~~a~-~~g-aD~i--GfIf~~~SpR~V~~~~A~~i~~~~-~~~~~~v~v~v-~~~e---i~~~i~~~~ld~v 96 (228)
T 4aaj_A 26 CGIKSLEELEIV-EKH-ADAT--GVVVNSNSKRRIPLEKAREIIENS-AIPVFLVSTMV-GFSE---WAMAIERTGAQYI 96 (228)
T ss_dssp CCCCSHHHHHHH-HTT-CSEE--EEECSSSSTTBCCHHHHHHHHHHC-SSCEEEEECCC-CHHH---HHHHHHHHTCSEE
T ss_pred CCCCcHHHHHHH-HcC-CCEE--EEEecCCCCCCCCHHHHHHHHHhh-CCCCEEEeccC-chHH---HHHHHHhccchhe
Confidence 677776654443 555 6654 454432111111 1112222211 23345566654 3543 4455677789999
Q ss_pred EecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEcc
Q 017176 95 NLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHS 174 (376)
Q Consensus 95 eiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~ 174 (376)
.||.. ..|+. ++.+++..++|+.=-+|+........++....+..+ ....+|++-+..
T Consensus 97 QLHG~-----------------E~~~~----~~~l~~~~~~~viKa~~v~~~~~~~~~~~~~~~~~~-~~~~~d~~LlDs 154 (228)
T 4aaj_A 97 QVHSN-----------------ALPQT----IDTLKKEFGVFVMKAFRVPTISKNPEEDANRLLSEI-SRYNADMVLLDT 154 (228)
T ss_dssp EECSC-----------------CCHHH----HHHHHHHHCCEEEEEEECCSSCSCHHHHHHHHHHHH-HHSCCSEEEEEC
T ss_pred ecccc-----------------cCHHH----HHHHhhccCceEEEEEEecccccchhhhHHHHHHHH-hccCCCEEccCC
Confidence 99841 23443 334444456676544555322211122222222222 346789888764
Q ss_pred CccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcCeeEEchHHh
Q 017176 175 RKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAY 240 (376)
Q Consensus 175 r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad~VmiGRa~l 240 (376)
. +|.+ ...+|+.+..+.. +.|+|..||+ +++.+.++++ .+..+|=+..|.=
T Consensus 155 ~----GGtG-------~~fDW~~~~~~~~---~~p~iLAGGL-~peNV~~Ai~~~~P~gVDVsSGVE 206 (228)
T 4aaj_A 155 G----AGSG-------KLHDLRVSSLVAR---KIPVIVAGGL-NAENVEEVIKVVKPYGVDVSSGVE 206 (228)
T ss_dssp ------------------CCCHHHHHHHH---HSCEEEESSC-CTTTHHHHHHHHCCSEEEESGGGE
T ss_pred C----CCCc-------CcCChHHHHHhhh---cCCeEEECCC-CHHHHHHHHHHhCCCEEEeCCCCC
Confidence 2 2221 1123776666544 4689999999 7888888887 7888998888874
No 296
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=94.95 E-value=0.35 Score=44.71 Aligned_cols=155 Identities=15% Similarity=0.129 Sum_probs=82.4
Q ss_pred CCChHHHHHHHHHhCCCcEEEecceeec-ccccccc---hhhhhhc----c-CCCCCCEEE-Ee-cCC---CHHHHHH-H
Q 017176 18 DWTDNHYRTLARLISKHAWLYTEMLAAE-TIIYQQG---NLDRFLA----F-SPEQHPIVL-QI-GGS---NLDNLAK-A 82 (376)
Q Consensus 18 ~~td~~~r~~~~~~Gg~gl~~te~v~~~-~~~~~~~---~~~~~~~----~-~~~~~p~~v-QL-~g~---~~~~~~~-a 82 (376)
+.-|..+.+++.+.| ++.+.++-.... .+.+.+. ..+.++. + .....|+++ -+ ||+ ++++..+ +
T Consensus 40 tayDa~sA~l~e~aG-~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na 118 (281)
T 1oy0_A 40 TAYDYSTARIFDEAG-IPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAALAAA 118 (281)
T ss_dssp ECCSHHHHHHHHTTT-CCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSSTTCHHHHHHHH
T ss_pred eCcCHHHHHHHHHcC-CCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCcccCCHHHHHHHH
Confidence 456778888777775 777776532221 1111110 1111111 1 112345444 33 232 5766555 6
Q ss_pred HHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecC---------CC----CCCc
Q 017176 83 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI---------GV----DDHD 149 (376)
Q Consensus 83 a~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~---------g~----~~~~ 149 (376)
.+.++++|+++|.|-.| +...+.|+++.+ .++||.--+-+ |+ .+.
T Consensus 119 ~rl~~eaGa~aVklEdg--------------------~e~~~~I~al~~-agIpV~gHiGLtPqsv~~~ggf~v~grt~- 176 (281)
T 1oy0_A 119 TRFLKDGGAHAVKLEGG--------------------ERVAEQIACLTA-AGIPVMAHIGFTPQSVNTLGGFRVQGRGD- 176 (281)
T ss_dssp HHHHHTTCCSEEEEEBS--------------------GGGHHHHHHHHH-HTCCEEEEEECCC--------------CH-
T ss_pred HHHHHHhCCeEEEECCc--------------------HHHHHHHHHHHH-CCCCEEeeecCCcceecccCCeEEEeCcH-
Confidence 66677799999988533 123344444443 26776522211 11 111
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecC
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG 215 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGg 215 (376)
..+++++. ++.++++|++.|.+.+-. -+...++.++. ++|+|+-|.
T Consensus 177 ~a~~~i~r-A~a~~eAGA~~ivlE~vp------------------~~~a~~it~~l-~iP~igIGa 222 (281)
T 1oy0_A 177 AAEQTIAD-AIAVAEAGAFAVVMEMVP------------------AELATQITGKL-TIPTVGIGA 222 (281)
T ss_dssp HHHHHHHH-HHHHHHHTCSEEEEESCC------------------HHHHHHHHHHC-SSCEEEESS
T ss_pred HHHHHHHH-HHHHHHcCCcEEEEecCC------------------HHHHHHHHHhC-CCCEEEeCC
Confidence 23455554 456788999999988632 23455666765 899998764
No 297
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=94.88 E-value=0.03 Score=52.10 Aligned_cols=96 Identities=10% Similarity=0.096 Sum_probs=62.1
Q ss_pred HHHHHHHhcccC--ccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHH
Q 017176 123 GEAMSVIAANTN--VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYA 200 (376)
Q Consensus 123 ~eiv~~v~~~~~--~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~ 200 (376)
.+.++++|+..+ .++.|-+ ++++++.+ + .++|+|.|-++..+.. .-.+.+..
T Consensus 180 ~~av~~ar~~~~~~~~I~VEV-------~tleea~e----A-~~aGaD~I~LDn~~~e--------------~l~~av~~ 233 (285)
T 1o4u_A 180 ERAVQEVRKIIPFTTKIEVEV-------ENLEDALR----A-VEAGADIVMLDNLSPE--------------EVKDISRR 233 (285)
T ss_dssp HHHHHHHHTTSCTTSCEEEEE-------SSHHHHHH----H-HHTTCSEEEEESCCHH--------------HHHHHHHH
T ss_pred HHHHHHHHHhCCCCceEEEEe-------CCHHHHHH----H-HHcCCCEEEECCCCHH--------------HHHHHHHH
Confidence 455666666542 4555532 23445433 2 2589999999874310 00122333
Q ss_pred HHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCch
Q 017176 201 LLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 201 ~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
+....+++|+.++||| +++.+.+..++|+|++.+|+....-|++
T Consensus 234 l~~~~~~v~ieASGGI-t~eni~~~a~tGVD~IsvGslt~sa~~~ 277 (285)
T 1o4u_A 234 IKDINPNVIVEVSGGI-TEENVSLYDFETVDVISSSRLTLQEVFV 277 (285)
T ss_dssp HHHHCTTSEEEEEECC-CTTTGGGGCCTTCCEEEEGGGTSSCCCC
T ss_pred hhccCCCceEEEECCC-CHHHHHHHHHcCCCEEEEeHHHcCCCCc
Confidence 3333457999999999 7888888888999999999988777764
No 298
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=94.84 E-value=0.035 Score=55.82 Aligned_cols=64 Identities=16% Similarity=0.295 Sum_probs=48.6
Q ss_pred hhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchH
Q 017176 162 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 238 (376)
Q Consensus 162 ~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa 238 (376)
+.++|+|.|.|..-. |++. .-.+.++.+++.+++++|| .|.|.|.+.++.+++.|||+|-+|-|
T Consensus 289 Lv~AGvD~iviD~ah----Ghs~--------~v~~~i~~ik~~~p~~~vi-aGNVaT~e~a~~Li~aGAD~vkVGiG 352 (556)
T 4af0_A 289 LAEAGLDVVVLDSSQ----GNSV--------YQIEFIKWIKQTYPKIDVI-AGNVVTREQAAQLIAAGADGLRIGMG 352 (556)
T ss_dssp HHHTTCCEEEECCSC----CCSH--------HHHHHHHHHHHHCTTSEEE-EEEECSHHHHHHHHHHTCSEEEECSS
T ss_pred HHhcCCcEEEEeccc----cccH--------HHHHHHHHHHhhCCcceEE-eccccCHHHHHHHHHcCCCEEeecCC
Confidence 447999999986432 2211 1156778888888888765 58999999999999999999988765
No 299
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=94.80 E-value=0.24 Score=44.60 Aligned_cols=103 Identities=16% Similarity=0.104 Sum_probs=65.7
Q ss_pred HHHHHHHHHHhcccCccEEEEecCCCCCC-ccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHH
Q 017176 120 KFVGEAMSVIAANTNVPVSVKCRIGVDDH-DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYY 198 (376)
Q Consensus 120 ~~~~eiv~~v~~~~~~pv~vKiR~g~~~~-~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v 198 (376)
..+..+++.+...- .+.|-++.-.++. .+.....+ +++.++++|+..|.+.+ .+.+
T Consensus 5 ~~~~~~~~~~~~~~--~livscq~~~~~pl~~~~~~~~-~A~a~~~~Ga~~i~~~~--------------------~~~i 61 (232)
T 3igs_A 5 SLLEQLDKNIAASG--GLIVSCQPVPGSPLDKPEIVAA-MALAAEQAGAVAVRIEG--------------------IDNL 61 (232)
T ss_dssp CHHHHHHHHHHHHC--CEEEECCCCTTCTTCSHHHHHH-HHHHHHHTTCSEEEEES--------------------HHHH
T ss_pred HHHHHHHHHhhhcC--CEEEEEeCCCCCCCCCcchHHH-HHHHHHHCCCeEEEECC--------------------HHHH
Confidence 34555666662221 3555555432222 22333333 46677889999988621 4567
Q ss_pred HHHHhhCCCCeEEEe-----cC--C---CCHHHHHHHHHcCcCeeEEchHHhhCCchh
Q 017176 199 YALLRDFPDLTFTLN-----GG--I---NTVDEVNAALRKGAHHVMVGRAAYQNPWYT 246 (376)
Q Consensus 199 ~~~~~~~~~ipVi~n-----Gg--I---~s~~da~~~l~~Gad~VmiGRa~l~~P~lf 246 (376)
.++++. +++||++. || + .+.+++.++++.|||.|.++.+...+|..+
T Consensus 62 ~~ir~~-v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~~p~~l 118 (232)
T 3igs_A 62 RMTRSL-VSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQRPVAV 118 (232)
T ss_dssp HHHHTT-CCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCH
T ss_pred HHHHHh-cCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccccCCHHHH
Confidence 777765 59999862 33 3 356789998889999999999888888653
No 300
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=94.80 E-value=0.29 Score=47.52 Aligned_cols=136 Identities=10% Similarity=0.054 Sum_probs=84.3
Q ss_pred EecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCC
Q 017176 70 QIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDH 148 (376)
Q Consensus 70 QL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~ 148 (376)
.+...+++.+++.++...+.||..+-+..|.+.... +. . ..++.-.+.|++||+.+ +..+.|-..-+|+
T Consensus 160 t~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~---~~-~----~~~~~di~~v~avR~a~~d~~L~vDaN~~w~-- 229 (393)
T 3u9i_A 160 TITTGSVTAAARAAQAIVARGVTTIKIKIGAGDPDA---TT-I----RTMEHDLARIVAIRDVAPTARLILDGNCGYT-- 229 (393)
T ss_dssp EEC---CHHHHHHHHHHHTTTCCEEEEECC----------C-H----HHHHHHHHHHHHHHHHSTTSEEEEECCSCCC--
T ss_pred EecCCCHHHHHHHHHHHHHcCCCeEEEEeCCCcccc---cc-c----ccHHHHHHHHHHHHHHCCCCeEEEEccCCCC--
Confidence 344567888988888888889999999876543210 10 1 22556667788888876 3344444334443
Q ss_pred ccHHHHHHHHHHHh--hcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHH
Q 017176 149 DSYNQLCDFIYKVS--SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL 226 (376)
Q Consensus 149 ~~~~~~~~~i~~~~--e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l 226 (376)
.++.++++ +.+ ++.++.+|. . .+++-+++.++++.+.. ++||.+.=.+.+..++.+++
T Consensus 230 --~~~A~~~~-~~L~~~~~~i~~iE----e------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i 289 (393)
T 3u9i_A 230 --APDALRLL-DMLGVHGIVPALFE----Q------------PVAKDDEEGLRRLTATR-RVPVAADESVASATDAARLA 289 (393)
T ss_dssp --HHHHHHHH-HTTTTTTCCCSEEE----C------------CSCTTCTTHHHHHHHTC-SSCEEESTTCCSHHHHHHHH
T ss_pred --HHHHHHHH-HHHhhCCCCeEEEE----C------------CCCCCcHHHHHHHHhhC-CCcEEeCCcCCCHHHHHHHH
Confidence 44555443 445 456666654 1 12222355566777664 89999988999999999999
Q ss_pred H-cCcCeeEE
Q 017176 227 R-KGAHHVMV 235 (376)
Q Consensus 227 ~-~Gad~Vmi 235 (376)
+ ..+|.|++
T Consensus 290 ~~~a~d~i~~ 299 (393)
T 3u9i_A 290 RNAAVDVLNI 299 (393)
T ss_dssp HTTCCSEEEE
T ss_pred HcCCCCEEEe
Confidence 8 56888876
No 301
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=94.77 E-value=0.042 Score=55.18 Aligned_cols=61 Identities=23% Similarity=0.256 Sum_probs=48.1
Q ss_pred hcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEc
Q 017176 163 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 236 (376)
Q Consensus 163 e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiG 236 (376)
.++|+|.|.++.... .+ +...+.+.++++.++++||++ |++.+.+++..+.+.|||+|.+|
T Consensus 238 ~~aG~d~I~id~a~g----~~--------~~~~~~v~~i~~~~p~~~Vi~-g~v~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 238 VAAGVDVVVVDTAHG----HS--------KGVIERVRWVKQTFPDVQVIG-GNIATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp HHTTCSEEEEECSCC----SB--------HHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred hhcccceEEecccCC----cc--------hhHHHHHHHHHHHCCCceEEE-eeeCcHHHHHHHHHcCCCEEEEC
Confidence 368999999985431 11 112577888888877889887 88999999999999999999985
No 302
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=94.74 E-value=0.33 Score=44.75 Aligned_cols=53 Identities=8% Similarity=0.076 Sum_probs=41.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEE
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVK 140 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vK 140 (376)
+.+...+-|+...+.|+|.||||++++. ...++.+..+|+++++.+++|++|-
T Consensus 32 ~~~~a~~~a~~~v~~GAdiIDIg~~s~~-------------~eE~~rv~~vi~~l~~~~~~pisID 84 (271)
T 2yci_X 32 DPRPIQEWARRQAEKGAHYLDVNTGPTA-------------DDPVRVMEWLVKTIQEVVDLPCCLD 84 (271)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECCSCS-------------SCHHHHHHHHHHHHHHHCCCCEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcCc-------------hhHHHHHHHHHHHHHHhCCCeEEEe
Confidence 3455566667777899999999987632 2457889999999998889999884
No 303
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=94.72 E-value=1.2 Score=40.14 Aligned_cols=191 Identities=13% Similarity=0.150 Sum_probs=100.2
Q ss_pred CCcEEEccCCCCChHHHHHHHHHhCCC-cE--EEecceeecccccccchhhhhhccCCCCCCEEEEec-CCCHHHHHHHH
Q 017176 8 PPWFSVAPMMDWTDNHYRTLARLISKH-AW--LYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIG-GSNLDNLAKAT 83 (376)
Q Consensus 8 ~nri~lAPM~~~td~~~r~~~~~~Gg~-gl--~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~-g~~~~~~~~aa 83 (376)
++++++| +-..+-.....+..+.++. .. +-+++....+ ..-...+. ..+.++++=+- +--|.....++
T Consensus 8 ~~~LivA-LD~~~~~~al~l~~~~~~~v~~~Kvg~~lf~~~G----~~~v~~L~---~~g~~iflDlK~~DI~nTv~~~~ 79 (239)
T 3tr2_A 8 DPKVIVA-IDAGTVEQARAQINPLTPELCHLKIGSILFTRYG----PAFVEELM---QKGYRIFLDLKFYDIPQTVAGAC 79 (239)
T ss_dssp CCCEEEE-CCCSSHHHHHHHHTTCCTTTCEEEEEHHHHHHHH----HHHHHHHH---HTTCCEEEEEEECSCHHHHHHHH
T ss_pred CCCeEEE-eCCCCHHHHHHHHHHhCCcccEEEeCHHHHHhhC----HHHHHHHH---hcCCCEEEEecccccchHHHHHH
Confidence 3567766 3223334445555555532 22 2344443221 11112221 23567776664 44467777788
Q ss_pred HHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcc--cCcc----EEEEecCCCCC------CccH
Q 017176 84 ELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN--TNVP----VSVKCRIGVDD------HDSY 151 (376)
Q Consensus 84 ~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~--~~~p----v~vKiR~g~~~------~~~~ 151 (376)
+.+.++|+|.+.+|. ||+ ++-+...++...+. .+.| |++-++.+-.+ ..++
T Consensus 80 ~~~~~~gad~vTvh~------------~~G-----~~~~~~a~~~~~~~~~~~~~~l~~Vt~LTS~~~~~l~~~g~~~~~ 142 (239)
T 3tr2_A 80 RAVAELGVWMMNIHI------------SGG-----RTMMETVVNALQSITLKEKPLLIGVTILTSLDGSDLKTLGIQEKV 142 (239)
T ss_dssp HHHHHTTCSEEEEEG------------GGC-----HHHHHHHHHHHHTCCCSSCCEEEEECSCTTCCHHHHHHTTCCSCH
T ss_pred HHHHhCCCCEEEEec------------cCC-----HHHHHHHHHHHHhcCcCCCceEEEEEEEeeCCHHHHHhcCCCCCH
Confidence 888999999999984 122 23344444444332 1123 22222221100 0233
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHH----------H
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVD----------E 221 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~----------d 221 (376)
.+.+..+++...++|++.+.+++... ..+++..+.-.++...||.-.. +
T Consensus 143 ~~~v~~~A~~a~~~g~~GvV~s~~e~---------------------~~ir~~~~~~fl~vtPGIr~~g~~~~dQ~rv~t 201 (239)
T 3tr2_A 143 PDIVCRMATLAKSAGLDGVVCSAQEA---------------------ALLRKQFDRNFLLVTPGIRLETDEKGDQKRVMT 201 (239)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCHHHH---------------------HHHHTTCCTTSEEEECCBC----------CCBC
T ss_pred HHHHHHHHHHHHHcCCCEEEECchhH---------------------HHHHHhcCCCcEEECCCcCCCCCCcCcccccCC
Confidence 44444456666678999988765321 1233333333356667775321 1
Q ss_pred HHHHHHcCcCeeEEchHHhhCCc
Q 017176 222 VNAALRKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 222 a~~~l~~Gad~VmiGRa~l~~P~ 244 (376)
..++++.|+|.+.+||+++..+.
T Consensus 202 ~~~~~~aGad~lVvGr~I~~a~d 224 (239)
T 3tr2_A 202 PRAAIQAGSDYLVIGRPITQSTD 224 (239)
T ss_dssp HHHHHHHTCSEEEECHHHHTSSS
T ss_pred HHHHHHcCCCEEEEChHHhCCCC
Confidence 45677789999999999997655
No 304
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=94.70 E-value=0.85 Score=41.68 Aligned_cols=192 Identities=13% Similarity=0.106 Sum_probs=102.4
Q ss_pred cCCcEEEccCCCCChHHHHHHHHHhCCCc--E--EEecceeecccccccchhhhhhccCCCCCCEEEEec-CCCHHHHHH
Q 017176 7 LPPWFSVAPMMDWTDNHYRTLARLISKHA--W--LYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIG-GSNLDNLAK 81 (376)
Q Consensus 7 l~nri~lAPM~~~td~~~r~~~~~~Gg~g--l--~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~-g~~~~~~~~ 81 (376)
+++|+++| +-..+-.....++.+.++.- . +-++++...+ ..-...+.+ .+.++++=+- +--|.....
T Consensus 3 m~~~LivA-LD~~~~~~al~l~~~l~~~v~~~~KvG~~l~~~~G----~~~v~~Lk~---~g~~VflDlK~~DIpnTv~~ 74 (259)
T 3tfx_A 3 MDRPVIVA-LDLDNEEQLNKILSKLGDPHDVFVKVGMELFYNAG----IDVIKKLTQ---QGYKIFLDLKMHDIPNTVYN 74 (259)
T ss_dssp -CCCEEEE-CCCSCHHHHHHHHHTTCCGGGCEEEECHHHHHHHC----HHHHHHHHH---TTCEEEEEEEECSCHHHHHH
T ss_pred CCCCeEEE-eCCCCHHHHHHHHHHhCcccceEEEeCHHHHHhcC----HHHHHHHHH---CCCcEEEEecccccchHHHH
Confidence 35677776 43334445556666665321 1 1233333222 111222222 2566766653 445777777
Q ss_pred HHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcc--cC--cc--EEE--EecCCCC----C--
Q 017176 82 ATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN--TN--VP--VSV--KCRIGVD----D-- 147 (376)
Q Consensus 82 aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~--~~--~p--v~v--KiR~g~~----~-- 147 (376)
+++.+.++|+|.+.+|. ||+ .+-+...++...+. .+ .| +.| =.+.+.. +
T Consensus 75 a~~~~~~~gad~vTVh~------------~~G-----~~~~~aa~~~~~~~~~~g~~~~~li~Vt~lTS~~~~~l~~~~g 137 (259)
T 3tfx_A 75 GAKALAKLGITFTTVHA------------LGG-----SQMIKSAKDGLIAGTPAGHSVPKLLAVTELTSISDDVLRNEQN 137 (259)
T ss_dssp HHHHHHTTTCSEEEEEG------------GGC-----HHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSC
T ss_pred HHHHHHhcCCCEEEEcC------------CCC-----HHHHHHHHHHHHHhcccCCCCceEEEEEEeCCCCHHHHHHHhC
Confidence 88888899999999984 122 23344444444321 11 22 222 1222200 0
Q ss_pred -CccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHH------
Q 017176 148 -HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVD------ 220 (376)
Q Consensus 148 -~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~------ 220 (376)
..++.+.+..+++...++|++.+.+++.. ...+++. ..+-.++...||.-..
T Consensus 138 ~~~~~~e~v~~~A~~a~~~G~dGvV~s~~e------------------~~~ir~~---~~~~f~~vtPGIr~~g~~~gDQ 196 (259)
T 3tfx_A 138 CRLPMAEQVLSLAKMAKHSGADGVICSPLE------------------VKKLHEN---IGDDFLYVTPGIRPAGNAKDDQ 196 (259)
T ss_dssp BSSCHHHHHHHHHHHHHHTTCCEEECCGGG------------------HHHHHHH---HCSSSEEEECCCCCC-------
T ss_pred CCCCHHHHHHHHHHHHHHhCCCEEEECHHH------------------HHHHHhh---cCCccEEEcCCcCCCCCCcCCc
Confidence 12344555445666778999998875321 2223332 2233466777776421
Q ss_pred ----HHHHHHHcCcCeeEEchHHhhCCc
Q 017176 221 ----EVNAALRKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 221 ----da~~~l~~Gad~VmiGRa~l~~P~ 244 (376)
...++++.|||.+.+||++...++
T Consensus 197 ~Rv~T~~~a~~aGad~iVvGr~I~~a~d 224 (259)
T 3tfx_A 197 SRVATPKMAKEWGSSAIVVGRPITLASD 224 (259)
T ss_dssp ----CHHHHHHTTCSEEEECHHHHTSSS
T ss_pred cccCCHHHHHHcCCCEEEEChHHhCCCC
Confidence 156677899999999999987665
No 305
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=94.66 E-value=0.017 Score=54.16 Aligned_cols=39 Identities=13% Similarity=0.209 Sum_probs=28.3
Q ss_pred CCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCch
Q 017176 206 PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 206 ~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
+++||.++||| |.+.+.++.++|+|++.+|+.....|++
T Consensus 248 ~~v~I~ASGGI-t~~ni~~~~~~GvD~i~vGs~i~~a~~~ 286 (294)
T 3c2e_A 248 KHFLLECSGGL-NLDNLEEYLCDDIDIYSTSSIHQGTPVI 286 (294)
T ss_dssp -CCEEEEECCC-CC------CCCSCSEEECGGGTSSCCCC
T ss_pred CCeEEEEECCC-CHHHHHHHHHcCCCEEEEechhcCCCCC
Confidence 45999999999 9999999999999999999987666764
No 306
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=94.57 E-value=0.19 Score=47.41 Aligned_cols=63 Identities=13% Similarity=0.138 Sum_probs=46.4
Q ss_pred cCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhC
Q 017176 164 LSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 242 (376)
Q Consensus 164 ~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 242 (376)
++|+|.|-+...+ .+.++++++.. .++++.++||| +.+.+.+..++|+|++.+|.--..-
T Consensus 249 ~aGaD~I~LDn~~------------------~~~l~~av~~l~~~v~ieaSGGI-t~~~I~~~a~tGVD~isvGalt~sa 309 (320)
T 3paj_A 249 SAGADIIMLDNFS------------------LEMMREAVKINAGRAALENSGNI-TLDNLKECAETGVDYISVGALTKHL 309 (320)
T ss_dssp HTTCSEEEEESCC------------------HHHHHHHHHHHTTSSEEEEESSC-CHHHHHHHHTTTCSEEECTHHHHSB
T ss_pred HcCCCEEEECCCC------------------HHHHHHHHHHhCCCCeEEEECCC-CHHHHHHHHHcCCCEEEECceecCC
Confidence 4799999987632 23344443322 47999999999 6899998888999999999855444
Q ss_pred Cch
Q 017176 243 PWY 245 (376)
Q Consensus 243 P~l 245 (376)
|++
T Consensus 310 ~~l 312 (320)
T 3paj_A 310 KAL 312 (320)
T ss_dssp CCC
T ss_pred Ccc
Confidence 554
No 307
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=94.54 E-value=0.046 Score=54.95 Aligned_cols=61 Identities=18% Similarity=0.219 Sum_probs=48.4
Q ss_pred hcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEc
Q 017176 163 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 236 (376)
Q Consensus 163 e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiG 236 (376)
.++|+|.|.++.... . .....+.+.++++.++++||++ |++.+.+++..+.+.|||+|.+|
T Consensus 240 ~~aG~d~I~id~a~g----~--------~~~~~~~i~~ir~~~p~~~Vi~-g~v~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 240 VEAGVDVLLIDSSHG----H--------SEGVLQRIRETRAAYPHLEIIG-GNVATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp HHTTCSEEEEECSCT----T--------SHHHHHHHHHHHHHCTTCCEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HhccCceEEeccccc----c--------chHHHHHHHHHHHHCCCceEEE-cccCcHHHHHHHHHhCCCEEEEC
Confidence 368999999986531 1 1112577888888888899988 88999999999999999999986
No 308
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=94.50 E-value=0.078 Score=49.33 Aligned_cols=67 Identities=9% Similarity=0.081 Sum_probs=49.4
Q ss_pred cCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCC
Q 017176 164 LSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 243 (376)
Q Consensus 164 ~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P 243 (376)
++|+|.|-+|..+.. ...+.+..+....+++++.++||| +++.+.+..++|+|++.+|.....-|
T Consensus 212 ~aGaD~I~LDn~~~~--------------~~~~~v~~l~~~~~~v~ieaSGGI-t~~~i~~~a~tGVD~isvG~l~~~a~ 276 (284)
T 1qpo_A 212 PEKPELILLDNFAVW--------------QTQTAVQRRDSRAPTVMLESSGGL-SLQTAATYAETGVDYLAVGALTHSVR 276 (284)
T ss_dssp GGCCSEEEEETCCHH--------------HHHHHHHHHHHHCTTCEEEEESSC-CTTTHHHHHHTTCSEEECGGGTSSBC
T ss_pred HcCCCEEEECCCCHH--------------HHHHHHHHhhccCCCeEEEEECCC-CHHHHHHHHhcCCCEEEECHHHcCCC
Confidence 589999999874321 001233344433457999999999 78999999999999999999776667
Q ss_pred ch
Q 017176 244 WY 245 (376)
Q Consensus 244 ~l 245 (376)
++
T Consensus 277 ~~ 278 (284)
T 1qpo_A 277 VL 278 (284)
T ss_dssp CC
T ss_pred Cc
Confidence 64
No 309
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=94.50 E-value=1 Score=42.97 Aligned_cols=125 Identities=10% Similarity=0.080 Sum_probs=85.8
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCcc
Q 017176 73 GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDS 150 (376)
Q Consensus 73 g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~ 150 (376)
+..++.+.+.++.+.+.||..+-+..|. .+++.-.+.++++|+.+ +..+.+-..-+|+.
T Consensus 141 ~~~~~~~~~~~~~~~~~g~~~~K~Kvg~----------------~~~~~d~~~v~avr~~~g~~~~l~vDaN~~~~~--- 201 (370)
T 2chr_A 141 GDTKRDLDSAVEMIERRRHNRFKVKLGF----------------RSPQDDLIHMEALSNSLGSKAYLRVDVNQAWDE--- 201 (370)
T ss_dssp SCHHHHHHHHHHHHHTTSCCEEEEECSS----------------SCHHHHHHHHHHHHHHTTTTSEEEEECTTCCCT---
T ss_pred CchhhhHHHHHHHHhhcccceeeccccc----------------CChHHHHHHHHHHHHhcCCCcEEEecCCCCCCH---
Confidence 3456788888899999999998775431 23455566778888876 34556655556653
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cC
Q 017176 151 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KG 229 (376)
Q Consensus 151 ~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~G 229 (376)
++..++ .+.+++.++.+|- . .+++-+++.++++.+.. ++||.+.=.+.+..++.++++ ..
T Consensus 202 -~~A~~~-~~~l~~~~~~~iE----e------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~~~~~a 262 (370)
T 2chr_A 202 -QVASVY-IPELEALGVELIE----Q------------PVGRENTQALRRLSDNN-RVAIMADESLSTLASAFDLARDRS 262 (370)
T ss_dssp -HHHHHH-HHHHHTTTCCEEE----C------------CSCSSCHHHHHHHHHHC-SSEEEESSSCCSHHHHHHHHTTTC
T ss_pred -HHHHHH-HHHHHhcCCceec----C------------CCChhhhhhhhHHhhhc-cCCccCCccCCCHHHHHHHHHcCC
Confidence 233333 3455678887765 1 12233477777887765 899999889999999999998 55
Q ss_pred cCeeEE
Q 017176 230 AHHVMV 235 (376)
Q Consensus 230 ad~Vmi 235 (376)
+|.|++
T Consensus 263 ~d~i~~ 268 (370)
T 2chr_A 263 VDVFSL 268 (370)
T ss_dssp CSEECC
T ss_pred CcEEEe
Confidence 787754
No 310
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=94.49 E-value=3.4 Score=39.20 Aligned_cols=153 Identities=16% Similarity=0.156 Sum_probs=92.0
Q ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 62 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 62 ~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
....|+++.+.+++.++-.+.++.++++|+|++-+- .|... + ...+-+.+-.++|.+++++||.+--
T Consensus 98 ~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~--~P~Y~--~---------~s~~~l~~~f~~VA~a~~lPiilYn 164 (343)
T 2v9d_A 98 DRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVI--NPYYW--K---------VSEANLIRYFEQVADSVTLPVMLYN 164 (343)
T ss_dssp TTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEE--CCSSS--C---------CCHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred CCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC--CCCCC--C---------CCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 456799999999999999999999999999999885 45421 1 1356778888888888899998754
Q ss_pred ---cCCCCCCccHHHHHHHHHHHh-hcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC----CCCeEEEe
Q 017176 142 ---RIGVDDHDSYNQLCDFIYKVS-SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF----PDLTFTLN 213 (376)
Q Consensus 142 ---R~g~~~~~~~~~~~~~i~~~~-e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~----~~ipVi~n 213 (376)
|.|.+- +.+.+ .+++ +.-.+-.|--..+. ...+.++++.. +++. +.+
T Consensus 165 ~P~~tg~~l--~~e~~----~~La~~~pnIvgiKdssgd------------------~~~~~~l~~~~~~~~~~f~-v~~ 219 (343)
T 2v9d_A 165 FPALTGQDL--TPALV----KTLADSRSNIIGIKDTIDS------------------VAHLRSMIHTVKGAHPHFT-VLC 219 (343)
T ss_dssp CHHHHSSCC--CHHHH----HHHHHHCTTEEEEEECCSC------------------HHHHHHHHHHHHHHCTTCE-EEE
T ss_pred CchhcCcCC--CHHHH----HHHHHhCCCEEEEEeCCCC------------------HHHHHHHHHhcCCCCCCEE-EEE
Confidence 234332 22222 2333 22234333322211 33333443322 2443 456
Q ss_pred cCCCCHHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhC
Q 017176 214 GGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYG 256 (376)
Q Consensus 214 GgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g 256 (376)
|+= +.+...+..|++|++.|.+-+ -|..+.+.++....|
T Consensus 220 G~D---~~~l~~l~~Ga~G~is~~anv-~P~~~~~l~~a~~~G 258 (343)
T 2v9d_A 220 GYD---DHLFNTLLLGGDGAISASGNF-APQVSVNLLKAWRDG 258 (343)
T ss_dssp SSG---GGHHHHHHTTCCEECCGGGTT-CHHHHHHHHHHHHTT
T ss_pred CcH---HHHHHHHHCCCCEEEeCHHHh-HHHHHHHHHHHHHCC
Confidence 632 234566678999999987754 466654444443344
No 311
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=94.39 E-value=0.044 Score=54.85 Aligned_cols=63 Identities=22% Similarity=0.253 Sum_probs=49.4
Q ss_pred hhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEch
Q 017176 162 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 237 (376)
Q Consensus 162 ~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGR 237 (376)
+.++|+|.|.+++- .|.. ...++.+.++++.++++||+ .|+|.+.+++..+++.|+|+|.+|.
T Consensus 241 l~~~G~d~ivi~~a----~g~~--------~~~~~~i~~l~~~~p~~pvi-~G~v~t~~~a~~~~~~Gad~I~vg~ 303 (491)
T 1zfj_A 241 LFEAGADAIVIDTA----HGHS--------AGVLRKIAEIRAHFPNRTLI-AGNIATAEGARALYDAGVDVVKVGI 303 (491)
T ss_dssp HHHHTCSEEEECCS----CTTC--------HHHHHHHHHHHHHCSSSCEE-EEEECSHHHHHHHHHTTCSEEEECS
T ss_pred HHHcCCCeEEEeee----cCcc--------hhHHHHHHHHHHHCCCCcEe-CCCccCHHHHHHHHHcCCCEEEECc
Confidence 34679999999972 1211 12366777888777789999 9999999999999999999999984
No 312
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=94.36 E-value=0.36 Score=43.40 Aligned_cols=87 Identities=22% Similarity=0.093 Sum_probs=60.1
Q ss_pred HHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhh
Q 017176 125 AMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD 204 (376)
Q Consensus 125 iv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~ 204 (376)
+++.+++. ++..=+|. ++.++..++ ++.+.+.|++.|.|.-++.. ..+.+++++++
T Consensus 27 ~~~~l~~~---~vv~Vir~--~~~~~a~~~----a~al~~gGi~~iEvt~~t~~---------------a~e~I~~l~~~ 82 (232)
T 4e38_A 27 INNQLKAL---KVIPVIAI--DNAEDIIPL----GKVLAENGLPAAEITFRSDA---------------AVEAIRLLRQA 82 (232)
T ss_dssp HHHHHHHH---CEEEEECC--SSGGGHHHH----HHHHHHTTCCEEEEETTSTT---------------HHHHHHHHHHH
T ss_pred HHHHHHhC---CEEEEEEc--CCHHHHHHH----HHHHHHCCCCEEEEeCCCCC---------------HHHHHHHHHHh
Confidence 44444432 44444554 333334333 33445799999999765421 26778888888
Q ss_pred CCCCeEEEecCCCCHHHHHHHHHcCcCeeEEc
Q 017176 205 FPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 236 (376)
Q Consensus 205 ~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiG 236 (376)
+++ .+++.|-|.+.++++.+++.|||+|...
T Consensus 83 ~~~-~~iGaGTVlt~~~a~~Ai~AGA~fIvsP 113 (232)
T 4e38_A 83 QPE-MLIGAGTILNGEQALAAKEAGATFVVSP 113 (232)
T ss_dssp CTT-CEEEEECCCSHHHHHHHHHHTCSEEECS
T ss_pred CCC-CEEeECCcCCHHHHHHHHHcCCCEEEeC
Confidence 765 6899999999999999999999999864
No 313
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=94.36 E-value=0.42 Score=46.29 Aligned_cols=129 Identities=10% Similarity=0.123 Sum_probs=83.6
Q ss_pred EEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCC
Q 017176 69 LQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDD 147 (376)
Q Consensus 69 vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~ 147 (376)
..+...+++.+++.++.+.+.||..+-+..|.. .+ +.-.+.|++||+.+ +..+.|-..-+|+
T Consensus 138 ~t~~~~~~e~~~~~a~~~~~~G~~~iKlKvg~~------------~~----~~d~~~v~avR~~~~~~~L~vDaN~~w~- 200 (389)
T 3s5s_A 138 ITITTGSPERAEEAARRAAAMGFRALKVKVGGR------------LA----ASDPARIEAIHAAAPGASLILDGNGGLT- 200 (389)
T ss_dssp EEECSSCSHHHHHHHHHHHHHTCCEEEEECCGG------------GT----TTHHHHHHHHHHHCTTCEEEEECTTCSC-
T ss_pred eeecCCCHHHHHHHHHHHHHcCCCeEEEEecCC------------Ch----HHHHHHHHHHHHhCCCCeEEEECCCCCC-
Confidence 345556789998888888778999998865421 12 22345566677665 3344444344443
Q ss_pred CccHHHHHHHHHHHh--hcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHH
Q 017176 148 HDSYNQLCDFIYKVS--SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAA 225 (376)
Q Consensus 148 ~~~~~~~~~~i~~~~--e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~ 225 (376)
.++.++++ +.+ ++.++.+|. ..+++-+++.++++.+.. ++||.+.=.+.+..++.++
T Consensus 201 ---~~~A~~~~-~~L~~~~~~i~~iE----------------eP~~~~d~~~~~~l~~~~-~iPIa~dEs~~~~~~~~~~ 259 (389)
T 3s5s_A 201 ---AGEALALV-AHARRLGADVALLE----------------QPVPRDDWDGMKEVTRRA-GVDVAADESAASAEDVLRV 259 (389)
T ss_dssp ---HHHHHHHH-HHHHHTTCEEEEEE----------------CCSCTTCHHHHHHHHHHS-SSCEEESTTCSSHHHHHHH
T ss_pred ---HHHHHHHH-HHHhhCCCCeEEEE----------------CCCCcccHHHHHHHHhhC-CCCEEECCCCCCHHHHHHH
Confidence 44555543 344 445555544 112233477777887765 8999998899999999999
Q ss_pred HH-cCcCeeEE
Q 017176 226 LR-KGAHHVMV 235 (376)
Q Consensus 226 l~-~Gad~Vmi 235 (376)
++ ..+|.|++
T Consensus 260 i~~~a~d~v~~ 270 (389)
T 3s5s_A 260 AAERAATVVNI 270 (389)
T ss_dssp HHTTCCSEEEE
T ss_pred HHcCCCCEEEe
Confidence 98 56898887
No 314
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=94.34 E-value=0.32 Score=43.41 Aligned_cols=141 Identities=13% Similarity=0.142 Sum_probs=80.8
Q ss_pred CC-CEEEEec-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 64 QH-PIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 64 ~~-p~~vQL~-g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
+. ++++=+= +--|.....+++.+.+. |.+.+|..... .. -+...++...+ .+.-|++=+
T Consensus 52 ~~~~VflDlK~~DI~nTv~~~~~~~~~~--d~vTVh~~~G~----------~~------~~~~a~~~~~~-~~~~v~vLt 112 (222)
T 4dbe_A 52 DVEEIIVDFKLADIGYIMKSIVERLSFA--NSFIAHSFIGV----------KG------SLDELKRYLDA-NSKNLYLVA 112 (222)
T ss_dssp CCSEEEEEEEECSCHHHHHHHHTTCTTC--SEEEEESTTCT----------TT------THHHHHHHHHH-TTCEEEEEE
T ss_pred CCCeEEEEeeecchHHHHHHHHHHHHhC--CEEEEEcCcCc----------HH------HHHHHHHHHHh-cCCcEEEEE
Confidence 55 6776664 44466666666655555 99988853220 11 12223333322 123455545
Q ss_pred cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCH-H
Q 017176 142 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV-D 220 (376)
Q Consensus 142 R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~-~ 220 (376)
+.+..+..+. ....++++.+++|++.+.+++.. -+.+..+++..++ .++..+||.-. .
T Consensus 113 s~s~~~~~~~--~~~~~a~~a~~~g~~GvV~sat~------------------p~e~~~ir~~~~~-~~~vtPGI~~~g~ 171 (222)
T 4dbe_A 113 VMSHEGWSTL--FADYIKNVIREISPKGIVVGGTK------------------LDHITQYRRDFEK-MTIVSPGMGSQGG 171 (222)
T ss_dssp ECSSTTCCCT--THHHHHHHHHHHCCSEEEECTTC------------------HHHHHHHHHHCTT-CEEEECCBSTTSB
T ss_pred eCCCcchHHH--HHHHHHHHHHHhCCCEEEECCCC------------------HHHHHHHHHhCCC-CEEEcCCcccCcc
Confidence 5543322111 01224556677899998876532 1234455555666 67888988632 1
Q ss_pred HHHHHHHcCcCeeEEchHHhhCCc
Q 017176 221 EVNAALRKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 221 da~~~l~~Gad~VmiGRa~l~~P~ 244 (376)
+..++++.|+|.+.+||++...++
T Consensus 172 tp~~a~~~Gad~iVVGR~I~~A~d 195 (222)
T 4dbe_A 172 SYGDAVCAGADYEIIGRSIYNAGN 195 (222)
T ss_dssp CTTHHHHHTCSEEEECHHHHTSSS
T ss_pred CHHHHHHcCCCEEEECHHhcCCCC
Confidence 466677889999999999998665
No 315
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=94.22 E-value=0.33 Score=45.29 Aligned_cols=160 Identities=18% Similarity=0.209 Sum_probs=87.6
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEec
Q 017176 63 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 142 (376)
Q Consensus 63 ~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR 142 (376)
.+.|+. =+...|. -.|++++++|||.|=+...+ ...+. .| |-....-..+.+...++.|.+.++.||++-+-
T Consensus 15 ~~~~i~-~~~a~D~----~sA~~~~~aG~~ai~vs~~~-~a~~~-~G-~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d 86 (295)
T 1xg4_A 15 KENPLQ-IVGTINA----NHALLAQRAGYQAIYLSGGG-VAAGS-LG-LPDLGISTLDDVLTDIRRITDVCSLPLLVDAD 86 (295)
T ss_dssp HSSSEE-EEECSSH----HHHHHHHHTTCSCEEECHHH-HHHTT-TC-CCSSSCSCHHHHHHHHHHHHHHCCSCEEEECT
T ss_pred CCCcEE-EecCcCH----HHHHHHHHcCCCEEEECchH-hhhhh-cC-CCCCCCCCHHHHHHHHHHHHhhCCCCEEecCC
Confidence 344443 3455564 36788889999999774220 10000 01 11112345677888888888888999999999
Q ss_pred CCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccc-cCCCCCCCCCCCCccc--HHHHHHHHhhCCCCeEEEecCCCCH
Q 017176 143 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKAL-LNGISPAENRTIPPLK--YEYYYALLRDFPDLTFTLNGGINTV 219 (376)
Q Consensus 143 ~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~-~~g~~~~~~~~~~~~~--~~~v~~~~~~~~~ipVi~nGgI~s~ 219 (376)
.|+.+ +.+.+.+.+.++ +++|++.|++-+.... .-|+.+ +..+-|.. .+.|...++.....++..+|.....
T Consensus 87 ~Gyg~--~~~~~~~~v~~l-~~aGa~gv~iEd~~~~k~cgH~~--gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~ 161 (295)
T 1xg4_A 87 IGFGS--SAFNVARTVKSM-IKAGAAGLHIEDQVGAKRSGHRP--NKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDAL 161 (295)
T ss_dssp TCSSS--SHHHHHHHHHHH-HHHTCSEEEEECBCSSCCCTTSS--SCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCH
T ss_pred cccCC--CHHHHHHHHHHH-HHcCCeEEEECCCCCCcccCCCC--CCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHh
Confidence 98752 233344444444 4689999999876521 112111 11111211 2234444444334455555555432
Q ss_pred -----H----HHHHHHHcCcCeeEE
Q 017176 220 -----D----EVNAALRKGAHHVMV 235 (376)
Q Consensus 220 -----~----da~~~l~~Gad~Vmi 235 (376)
+ ++..+.+.|||+|.+
T Consensus 162 ~~~gl~~ai~ra~ay~eAGAd~i~~ 186 (295)
T 1xg4_A 162 AVEGLDAAIERAQAYVEAGAEMLFP 186 (295)
T ss_dssp HHHCHHHHHHHHHHHHHTTCSEEEE
T ss_pred hhcCHHHHHHHHHHHHHcCCCEEEE
Confidence 1 233333489999998
No 316
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=94.20 E-value=0.48 Score=44.72 Aligned_cols=90 Identities=16% Similarity=0.131 Sum_probs=64.1
Q ss_pred CHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHH
Q 017176 118 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 197 (376)
Q Consensus 118 ~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~ 197 (376)
.++.+.+.++.+++.++.|+.|.+-.. + .+.++.++ ++.+.|+|.|.+|++.. .+.
T Consensus 61 ~~~~l~~~i~~i~~~~~~p~gVnl~~~-~--~~~~~~~~----~~~~~g~d~V~l~~g~p-----------------~~~ 116 (326)
T 3bo9_A 61 KPDDLRKAISELRQKTDKPFGVNIILV-S--PWADDLVK----VCIEEKVPVVTFGAGNP-----------------TKY 116 (326)
T ss_dssp CHHHHHHHHHHHHTTCSSCEEEEEETT-S--TTHHHHHH----HHHHTTCSEEEEESSCC-----------------HHH
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEecc-C--CCHHHHHH----HHHHCCCCEEEECCCCc-----------------HHH
Confidence 678889999999988888888876541 1 22344433 23468999999987531 233
Q ss_pred HHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEE
Q 017176 198 YYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 235 (376)
Q Consensus 198 v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~Vmi 235 (376)
+..+.+ . +++|+. .|.+.+++..+.+.|+|+|.+
T Consensus 117 ~~~l~~-~-g~~v~~--~v~s~~~a~~a~~~GaD~i~v 150 (326)
T 3bo9_A 117 IRELKE-N-GTKVIP--VVASDSLARMVERAGADAVIA 150 (326)
T ss_dssp HHHHHH-T-TCEEEE--EESSHHHHHHHHHTTCSCEEE
T ss_pred HHHHHH-c-CCcEEE--EcCCHHHHHHHHHcCCCEEEE
Confidence 444443 3 788875 688999999998899999998
No 317
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=94.05 E-value=0.17 Score=46.94 Aligned_cols=63 Identities=11% Similarity=0.100 Sum_probs=46.9
Q ss_pred cCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhC
Q 017176 164 LSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 242 (376)
Q Consensus 164 ~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 242 (376)
++|+|.|-++..+ .+.++++++.. .++++.++||| +.+.+.+..++|+|.+.+|.-...-
T Consensus 216 ~aGaD~I~LDn~~------------------~~~l~~av~~~~~~v~ieaSGGI-t~~~i~~~a~tGVD~IsvGalt~sa 276 (287)
T 3tqv_A 216 AAKADIVMLDNFS------------------GEDIDIAVSIARGKVALEVSGNI-DRNSIVAIAKTGVDFISVGAITKHI 276 (287)
T ss_dssp HTTCSEEEEESCC------------------HHHHHHHHHHHTTTCEEEEESSC-CTTTHHHHHTTTCSEEECSHHHHSB
T ss_pred HcCCCEEEEcCCC------------------HHHHHHHHHhhcCCceEEEECCC-CHHHHHHHHHcCCCEEEEChhhcCC
Confidence 4899999987632 23333333322 37899999999 8889988888999999998776666
Q ss_pred Cch
Q 017176 243 PWY 245 (376)
Q Consensus 243 P~l 245 (376)
|++
T Consensus 277 ~~l 279 (287)
T 3tqv_A 277 KAI 279 (287)
T ss_dssp CCC
T ss_pred ccc
Confidence 664
No 318
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=94.03 E-value=0.13 Score=51.79 Aligned_cols=62 Identities=18% Similarity=0.281 Sum_probs=47.3
Q ss_pred hcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEch
Q 017176 163 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 237 (376)
Q Consensus 163 e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGR 237 (376)
.++|+|.|.+..... .+ ...++.+.++++.++++||+ .|+|.+.+++..+.+.|||+|.+|-
T Consensus 265 veaGvd~I~Id~a~g----~~--------~~v~~~i~~i~~~~~~~~vi-~g~v~t~e~a~~~~~aGad~i~vg~ 326 (511)
T 3usb_A 265 VKASVDAIVLDTAHG----HS--------QGVIDKVKEVRAKYPSLNII-AGNVATAEATKALIEAGANVVKVGI 326 (511)
T ss_dssp HHTTCSEEEEECSCT----TS--------HHHHHHHHHHHHHCTTSEEE-EEEECSHHHHHHHHHHTCSEEEECS
T ss_pred HhhccceEEeccccc----ch--------hhhhhHHHHHHHhCCCceEE-eeeeccHHHHHHHHHhCCCEEEECC
Confidence 468999999975321 10 11256788888888788887 4789999999999999999998853
No 319
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=94.00 E-value=0.78 Score=43.35 Aligned_cols=124 Identities=9% Similarity=0.121 Sum_probs=81.0
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccC--ccEEEEecCCCCCCccH
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN--VPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~--~pv~vKiR~g~~~~~~~ 151 (376)
.+++.+.+.++.+.+.||..+-|..|. .+++.-.+.+++||+.++ ..+.|-..-+|+ .
T Consensus 115 ~~~e~~~~~a~~~~~~G~~~~KiKvg~----------------~~~~~d~~~v~avr~~~g~~~~L~vDaN~~~~----~ 174 (332)
T 2ozt_A 115 GSGQAALEQWQQSWQRGQTTFKWKVGV----------------MSPEEEQAILKALLAALPPGAKLRLDANGSWD----R 174 (332)
T ss_dssp CTGGGHHHHHHHHHHTTCCEEEEECSS----------------SCHHHHHHHHHHHHHHSCTTCEEEEECTTCCC----H
T ss_pred CChHHHHHHHHHHHHcCCcEEEEEeCC----------------CChHHHHHHHHHHHHHcCCCCEEEEcccCCCC----H
Confidence 457777777777778899998875431 234555677888888764 444444444443 3
Q ss_pred HHHHHHHHHHhhcC---CccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHc
Q 017176 152 NQLCDFIYKVSSLS---PTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK 228 (376)
Q Consensus 152 ~~~~~~i~~~~e~~---Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~ 228 (376)
++.++++. .+++. ++.+|. ..+++-+++..+++.+.. ++||.+.=.+.+..++.++++.
T Consensus 175 ~~A~~~~~-~l~~~~~~~i~~iE----------------qP~~~~d~~~~~~l~~~~-~ipIa~dEs~~~~~~~~~~~~~ 236 (332)
T 2ozt_A 175 ATANRWFA-WLDRHGNGKIEYVE----------------QPLPPDQWQALLSLAQTV-TTAIALDESVVSAAEVQRWVDR 236 (332)
T ss_dssp HHHHHHHH-HHHHHCCTTEEEEE----------------CCSCTTCHHHHHHHHHHC-SSCEEESTTCCSHHHHHHHHHT
T ss_pred HHHHHHHH-HHHhhccCCcceeE----------------CCCCCCCHHHHHHHHHhC-CCCEEeCCCCCCHHHHHHHHHh
Confidence 45555443 34555 665544 112233477777777764 8999998889999999999995
Q ss_pred C-cCeeEE
Q 017176 229 G-AHHVMV 235 (376)
Q Consensus 229 G-ad~Vmi 235 (376)
| +|.+++
T Consensus 237 ~a~~~i~i 244 (332)
T 2ozt_A 237 GWPGFFVI 244 (332)
T ss_dssp TCCSEEEE
T ss_pred CCCCEEEE
Confidence 5 576665
No 320
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=93.89 E-value=1.9 Score=37.88 Aligned_cols=180 Identities=10% Similarity=0.056 Sum_probs=95.1
Q ss_pred CCCChHHHHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCCCCEEEEecCC-CHHHHHHHHHHHHHCCCCEEE
Q 017176 17 MDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGS-NLDNLAKATELANAYNYDEIN 95 (376)
Q Consensus 17 ~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~-~~~~~~~aa~~~~~~G~d~Ie 95 (376)
+|.|+..=...+.+.| ++.+.--+....+..-.......+....+. ....|-+|-+ +++ +..+.+++.+.|.|.
T Consensus 7 CGit~~eda~~a~~~G-aD~iGfif~~~SpR~V~~~~a~~i~~~~~~-~~~~VgVfvn~~~~---~i~~~~~~~~ld~vQ 81 (205)
T 1nsj_A 7 CGITNLEDALFSVESG-ADAVGFVFYPKSKRYISPEDARRISVELPP-FVFRVGVFVNEEPE---KILDVASYVQLNAVQ 81 (205)
T ss_dssp CCCCSHHHHHHHHHHT-CSEEEEECCTTCTTBCCHHHHHHHHHHSCS-SSEEEEEESSCCHH---HHHHHHHHHTCSEEE
T ss_pred CCCCcHHHHHHHHHcC-CCEEEEEecCCCCCcCCHHHHHHHHHhCCC-CCCEEEEEeCCCHH---HHHHHHHhhCCCEEE
Confidence 5788877777777776 665433332111100011112223222121 2233444554 444 344555667899999
Q ss_pred ecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccC
Q 017176 96 LNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR 175 (376)
Q Consensus 96 iN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r 175 (376)
||.. ..++.+ +.+++ ++|+.--++.. +.. ++ ..+ ....+|++.+.+.
T Consensus 82 LHG~-----------------e~~~~~----~~l~~--~~~vika~~v~--~~~---~l----~~~-~~~~~d~~LlD~~ 128 (205)
T 1nsj_A 82 LHGE-----------------EPIELC----RKIAE--RILVIKAVGVS--NER---DM----ERA-LNYREFPILLDTK 128 (205)
T ss_dssp ECSC-----------------CCHHHH----HHHHT--TSEEEEEEEES--SHH---HH----HHH-GGGTTSCEEEEES
T ss_pred ECCC-----------------CCHHHH----HHHhc--CCCEEEEEEcC--CHH---HH----HHH-HHcCCCEEEECCC
Confidence 9831 123333 33332 25665445542 211 22 111 2233899888764
Q ss_pred ccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcCeeEEchHHhhCCc
Q 017176 176 KALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 176 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad~VmiGRa~l~~P~ 244 (376)
...++|.+. ..+|+.+.... ..+.|++..||+ +++.+.++++ .++.+|-+.+|.-..|-
T Consensus 129 ~~~~GGtG~-------~fdw~~l~~~~--~~~~p~~LAGGL-~peNV~~ai~~~~p~gVDvsSGvE~~pG 188 (205)
T 1nsj_A 129 TPEYGGSGK-------TFDWSLILPYR--DRFRYLVLSGGL-NPENVRSAIDVVRPFAVDVSSGVEAFPG 188 (205)
T ss_dssp CSSSSSCCS-------CCCGGGTGGGG--GGSSCEEEESSC-CTTTHHHHHHHHCCSEEEESGGGEEETT
T ss_pred CCCCCCCCC-------ccCHHHHHhhh--cCCCcEEEECCC-CHHHHHHHHHhcCCCEEEECCceecCCC
Confidence 432233321 22354443221 126799999999 8888888877 79999999999865554
No 321
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=93.82 E-value=0.41 Score=43.67 Aligned_cols=143 Identities=13% Similarity=0.152 Sum_probs=80.8
Q ss_pred CCCEEEEec-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcc-cCcc----E
Q 017176 64 QHPIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN-TNVP----V 137 (376)
Q Consensus 64 ~~p~~vQL~-g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~-~~~p----v 137 (376)
+.++++=+- +--|.....+++.+.++|+|.+.+|. ||+ .+-+...++...+. .+.| |
T Consensus 78 g~~VflDlK~~DIpnTv~~a~~~~~~~gaD~vTVh~------------~~G-----~~~~~~a~~~~~~~g~~~~~li~V 140 (255)
T 3ldv_A 78 GFSVFLDLKFHDIPNTCSKAVKAAAELGVWMVNVHA------------SGG-----ERMMAASREILEPYGKERPLLIGV 140 (255)
T ss_dssp TCCEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEG------------GGC-----HHHHHHHHHHHGGGGGGSCEEEEE
T ss_pred CCCEEEEEecccchhHHHHHHHHHHhcCCCEEEEec------------cCC-----HHHHHHHHHHHhhcCCCCceEEEE
Confidence 567776664 44467777777888899999999984 222 23344444444322 1122 3
Q ss_pred EEEecCCCCC------CccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEE
Q 017176 138 SVKCRIGVDD------HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFT 211 (376)
Q Consensus 138 ~vKiR~g~~~------~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi 211 (376)
++.++.+-.+ ..++.+.+..+++...++|++.+.+++.. .. .+++..+.-.++
T Consensus 141 tvLTS~s~~~l~~~g~~~~~~~~V~~~A~~a~~aG~~GvV~sa~e------------------~~---~iR~~~g~~fl~ 199 (255)
T 3ldv_A 141 TVLTSMESADLQGIGILSAPQDHVLRLATLTKNAGLDGVVCSAQE------------------AS---LLKQHLGREFKL 199 (255)
T ss_dssp CSCTTCCHHHHHHTTCCSCHHHHHHHHHHHHHHTTCSEEECCHHH------------------HH---HHHHHHCTTSEE
T ss_pred EEEecCCHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCEEEECHHH------------------HH---HHHHhcCCCcEE
Confidence 3433332100 01233344444566667899998866421 22 222222222355
Q ss_pred EecCCCCHH----------HHHHHHHcCcCeeEEchHHhhCCc
Q 017176 212 LNGGINTVD----------EVNAALRKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 212 ~nGgI~s~~----------da~~~l~~Gad~VmiGRa~l~~P~ 244 (376)
...||.-.. +..++++.|+|.+.+||++...+.
T Consensus 200 VtPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr~I~~a~d 242 (255)
T 3ldv_A 200 VTPGIRPAGSEQGDQRRIMTPAQAIASGSDYLVIGRPITQAAH 242 (255)
T ss_dssp EEECCCCTTSTTSSCSSSCCHHHHHHTTCSEEEECHHHHTCSC
T ss_pred EeCCcccCcCCccceeccCCHHHHHHcCCCEEEECHHHhCCCC
Confidence 556664211 145667789999999999998665
No 322
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=93.80 E-value=3.2 Score=36.33 Aligned_cols=176 Identities=11% Similarity=0.062 Sum_probs=95.6
Q ss_pred CCCChHHHHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCCCCEEEEecCC-CHHHHHHHHHHHHHCCCCEEE
Q 017176 17 MDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGS-NLDNLAKATELANAYNYDEIN 95 (376)
Q Consensus 17 ~~~td~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~-~~~~~~~aa~~~~~~G~d~Ie 95 (376)
+|+|+..=...+.+.| ++.+.--+....+..-.......+...-+. .+..|-+|-+ +++ +..+.+++.+.|.|.
T Consensus 6 CGit~~eda~~a~~~G-aD~iGfif~~~SpR~V~~~~a~~i~~~~~~-~~~~VgVfvn~~~~---~i~~~~~~~~ld~vQ 80 (203)
T 1v5x_A 6 CGITRLEDALLAEALG-AFALGFVLAPGSRRRIAPEAARAIGEALGP-FVVRVGVFRDQPPE---EVLRLMEEARLQVAQ 80 (203)
T ss_dssp CCCCCHHHHHHHHHHT-CSEEEEECCTTCTTBCCHHHHHHHHHHSCS-SSEEEEEESSCCHH---HHHHHHHHTTCSEEE
T ss_pred cCCCcHHHHHHHHHcC-CCEEEEEecCCCCCcCCHHHHHHHHHhCCC-CCCEEEEEeCCCHH---HHHHHHHhhCCCEEE
Confidence 5778877777777776 665433332111100011112223222121 2333444554 444 445566778999999
Q ss_pred ecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccC
Q 017176 96 LNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR 175 (376)
Q Consensus 96 iN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r 175 (376)
||.. ..++.+.+ ++. ++|+.--++..-. .++ . +....+|++.+.+.
T Consensus 81 LHG~-----------------e~~~~~~~----l~~--~~~vika~~v~~~--~~l-~--------~~~~~~d~~LlD~~ 126 (203)
T 1v5x_A 81 LHGE-----------------EPPEWAEA----VGR--FYPVIKAFPLEGP--ARP-E--------WADYPAQALLLDGK 126 (203)
T ss_dssp ECSC-----------------CCHHHHHH----HTT--TSCEEEEEECSSS--CCG-G--------GGGSSCSEEEEECS
T ss_pred ECCC-----------------CCHHHHHH----hcc--CCCEEEEEEcCCh--Hhh-h--------hhhcCCCEEEEcCC
Confidence 9831 13344333 222 4677655665322 212 1 12233899988753
Q ss_pred ccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCc
Q 017176 176 KALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 176 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~ 244 (376)
. +|.+ ...+|+.+..+.. .+.|++..||+ +++.+.+++..++.+|-+.+|.-..|-
T Consensus 127 ~---gGtG-------~~fdW~~l~~~~~--~~~p~~LAGGL-~peNV~~ai~~~p~gVDvsSGvE~~pG 182 (203)
T 1v5x_A 127 R---PGSG-------EAYPRAWAKPLLA--TGRRVILAGGI-APENLEEVLALRPYALDLASGVEEAPG 182 (203)
T ss_dssp S---TTSC-------CCCCGGGGHHHHH--TTSCEEECSSC-CSTTHHHHHHHCCSEEEESGGGEEETT
T ss_pred C---CCCC-------CccCHHHHHhhhc--cCCcEEEECCC-CHHHHHHHHhcCCCEEEeCCceecCCC
Confidence 3 2221 1223665555222 26799999999 778887776668999999999865554
No 323
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=93.80 E-value=0.085 Score=53.18 Aligned_cols=63 Identities=14% Similarity=0.243 Sum_probs=48.6
Q ss_pred hhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEch
Q 017176 162 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 237 (376)
Q Consensus 162 ~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGR 237 (376)
+.++|+|.|.+|... |. +...++.+.++++.++++||++ |+|.+.+++..+.+.|||+|.+|.
T Consensus 263 ~~~aG~d~v~i~~~~----G~--------~~~~~~~i~~i~~~~~~~pvi~-~~v~t~~~a~~l~~aGad~I~vg~ 325 (514)
T 1jcn_A 263 LTQAGVDVIVLDSSQ----GN--------SVYQIAMVHYIKQKYPHLQVIG-GNVVTAAQAKNLIDAGVDGLRVGM 325 (514)
T ss_dssp HHHTTCSEEEECCSC----CC--------SHHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHcCCCEEEeeccC----Cc--------chhHHHHHHHHHHhCCCCceEe-cccchHHHHHHHHHcCCCEEEECC
Confidence 346999999998642 11 1122577888888777899876 789999999999999999998854
No 324
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=93.75 E-value=3.9 Score=37.14 Aligned_cols=145 Identities=11% Similarity=0.068 Sum_probs=89.1
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEec
Q 017176 64 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCR 142 (376)
Q Consensus 64 ~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR 142 (376)
...+++-|.+.+.++....++.+.+.|+|.||+=..+ +.. ..+.+.+.+.+..+++.+ ++|+.+-+|
T Consensus 19 ~p~Icv~l~~~~~~e~~~~~~~~~~~~~D~vElRvD~----------l~~--~~~~~~v~~~l~~lr~~~~~~PiI~T~R 86 (257)
T 2yr1_A 19 EPCICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADF----------FRA--IDDQERVLATANGLRNIAGEIPILFTIR 86 (257)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHHHSCCSEEEEEGGG----------CTT--TTCHHHHHHHHHHHHHHSSSCCEEEECC
T ss_pred CcEEEEEecCCCHHHHHHHHHHHhhcCCCEEEEEeec----------ccc--cCcHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 3458899999999998888888888899999995432 110 124678888999998877 789999888
Q ss_pred CCCCCC----ccHHHHHHHHHHHhhcCC-ccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecC--
Q 017176 143 IGVDDH----DSYNQLCDFIYKVSSLSP-TRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG-- 215 (376)
Q Consensus 143 ~g~~~~----~~~~~~~~~i~~~~e~~G-vd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGg-- 215 (376)
.-++.. .+-++-.+.+..+++ .| +|+|.|.-... . ....+.+..+.. ++.||++=-
T Consensus 87 t~~eGG~~~~~~~~~~~~ll~~~~~-~g~~d~iDvEl~~~--------------~-~~~~l~~~~~~~-~~kvI~S~Hdf 149 (257)
T 2yr1_A 87 SEREGGQPIPLNEAEVRRLIEAICR-SGAIDLVDYELAYG--------------E-RIADVRRMTEEC-SVWLVVSRHYF 149 (257)
T ss_dssp CTTTTCCCCSSCHHHHHHHHHHHHH-HTCCSEEEEEGGGT--------------T-HHHHHHHHHHHT-TCEEEEEEEES
T ss_pred ecccCCCCCCCCHHHHHHHHHHHHH-cCCCCEEEEECCCC--------------h-hHHHHHHHHHhC-CCEEEEEecCC
Confidence 754311 122233344444444 56 99999864321 0 022222222232 677777632
Q ss_pred --CCCHHHHHHHH----HcCcCeeEEch
Q 017176 216 --INTVDEVNAAL----RKGAHHVMVGR 237 (376)
Q Consensus 216 --I~s~~da~~~l----~~Gad~VmiGR 237 (376)
--+.+++.+.+ +.|||.|=|+.
T Consensus 150 ~~tP~~~el~~~~~~~~~~gaDivKia~ 177 (257)
T 2yr1_A 150 DGTPRKETLLADMRQAERYGADIAKVAV 177 (257)
T ss_dssp SCCCCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCcCHHHHHHHHHHHHhcCCCEEEEEe
Confidence 23335544433 37888776644
No 325
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=93.61 E-value=0.69 Score=42.80 Aligned_cols=126 Identities=14% Similarity=0.167 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHH
Q 017176 76 LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLC 155 (376)
Q Consensus 76 ~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~ 155 (376)
.+.+.+-++.+.++|+|+|-+.+=.|. +. -|.+.+.+++++.. +.++++--- +|...+..+.+
T Consensus 110 ~~~M~~dI~~~~~~GAdGvVfG~L~~d------g~------iD~~~~~~Li~~a~---~l~vTFHRA--FD~~~d~~~Al 172 (287)
T 3iwp_A 110 IEVMKADIRLAKLYGADGLVFGALTED------GH------IDKELCMSLMAICR---PLPVTFHRA--FDMVHDPMAAL 172 (287)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCBCTT------SC------BCHHHHHHHHHHHT---TSCEEECGG--GGGCSCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeeCCC------CC------cCHHHHHHHHHHcC---CCcEEEECc--hhccCCHHHHH
Confidence 355666777888999999988642232 11 36788888888754 356666322 34333333333
Q ss_pred HHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEEEecCCCCHHHHHHHHH-cCcCee
Q 017176 156 DFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALR-KGAHHV 233 (376)
Q Consensus 156 ~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~nGgI~s~~da~~~l~-~Gad~V 233 (376)
+ .+. +.|++.|-.||.... .....+.++++++.. .+|+|++-||| +.+.+.++++ +|++-+
T Consensus 173 e---~Li-~lGvdrILTSG~~~~------------a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV-~~~Ni~~l~~~tG~~~~ 235 (287)
T 3iwp_A 173 E---TLL-TLGFERVLTSGCDSS------------ALEGLPLIKRLIEQAKGRIVVMPGGGI-TDRNLQRILEGSGATEF 235 (287)
T ss_dssp H---HHH-HHTCSEEEECTTSSS------------TTTTHHHHHHHHHHHTTSSEEEECTTC-CTTTHHHHHHHHCCSEE
T ss_pred H---HHH-HcCCCEEECCCCCCC------------hHHhHHHHHHHHHHhCCCCEEEECCCc-CHHHHHHHHHhhCCCEE
Confidence 3 333 469999988875321 011266677776543 36999999999 6677788887 898866
Q ss_pred EE
Q 017176 234 MV 235 (376)
Q Consensus 234 mi 235 (376)
=.
T Consensus 236 H~ 237 (287)
T 3iwp_A 236 HC 237 (287)
T ss_dssp EE
T ss_pred eE
Confidence 54
No 326
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=93.59 E-value=0.59 Score=44.03 Aligned_cols=101 Identities=14% Similarity=0.100 Sum_probs=63.4
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCC-CCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEE
Q 017176 63 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCG-CPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVK 140 (376)
Q Consensus 63 ~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~g-cP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vK 140 (376)
.+.|+. =+...|. -.|++++++|||.|=+... .-.......| ...-..+.+...++.|.+.+ +.||++-
T Consensus 37 ~~~~i~-~~~ayD~----~sA~i~e~aGfdai~vs~~~~a~~~lG~pD----~~~vt~~em~~~~~~I~r~~~~~PviaD 107 (318)
T 1zlp_A 37 EHGSVL-MPGVQDA----LSAAVVEKTGFHAAFVSGYSVSAAMLGLPD----FGLLTTTEVVEATRRITAAAPNLCVVVD 107 (318)
T ss_dssp HSSSEE-EEEECSH----HHHHHHHHTTCSEEEECHHHHHHHHHCCCS----SSCSCHHHHHHHHHHHHHHSSSSEEEEE
T ss_pred CCCcEE-EecCCCH----HHHHHHHHcCCCEEEECcHHHhhHhcCCCC----CCCCCHHHHHHHHHHHHhhccCCCEEEe
Confidence 344443 2444553 3678888999999977431 1100001111 12345677888888888888 8999999
Q ss_pred ecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCc
Q 017176 141 CRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK 176 (376)
Q Consensus 141 iR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~ 176 (376)
+-.|+.+ .+...+.+.++ .++|++.|++-+..
T Consensus 108 ~d~Gyg~---~~~v~~tv~~l-~~aGaagv~iED~~ 139 (318)
T 1zlp_A 108 GDTGGGG---PLNVQRFIREL-ISAGAKGVFLEDQV 139 (318)
T ss_dssp CTTCSSS---HHHHHHHHHHH-HHTTCCEEEEECBC
T ss_pred CCCCCCC---HHHHHHHHHHH-HHcCCcEEEECCCC
Confidence 9999753 33444444444 46999999998765
No 327
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=93.58 E-value=1.1 Score=42.72 Aligned_cols=132 Identities=14% Similarity=0.117 Sum_probs=82.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEec-----------CCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecC
Q 017176 75 NLDNLAKATELANAYNYDEINLN-----------CGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI 143 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN-----------~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~ 143 (376)
..+.+....+.+++.|.+.+--= .++|.-+ -||.-+++..++.++-+ ++.||.+|.-+
T Consensus 89 ~~e~~~~L~~~~~~~Gi~~~st~~d~~svd~l~~~~v~~~K------I~S~~~~n~~LL~~va~-----~gkPviLstGm 157 (349)
T 2wqp_A 89 NEEDEIKLKEYVESKGMIFISTLFSRAAALRLQRMDIPAYK------IGSGECNNYPLIKLVAS-----FGKPIILSTGM 157 (349)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHTCSCEE------ECGGGTTCHHHHHHHHT-----TCSCEEEECTT
T ss_pred CHHHHHHHHHHHHHhCCeEEEeeCCHHHHHHHHhcCCCEEE------ECcccccCHHHHHHHHh-----cCCeEEEECCC
Confidence 45666666667777775554221 2344433 26667788877666533 58999998665
Q ss_pred CCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHH
Q 017176 144 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVN 223 (376)
Q Consensus 144 g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~ 223 (376)
. +++|+...+. .+.+.|.+.+.+|+-+. | ..+ ...+++..+..+++.++++||..++--....-+.
T Consensus 158 a-----t~~Ei~~Ave-~i~~~G~~iiLlhc~s~-Y--p~~-----~~~~nL~ai~~lk~~f~~lpVg~sdHt~G~~~~~ 223 (349)
T 2wqp_A 158 N-----SIESIKKSVE-IIREAGVPYALLHCTNI-Y--PTP-----YEDVRLGGMNDLSEAFPDAIIGLSDHTLDNYACL 223 (349)
T ss_dssp C-----CHHHHHHHHH-HHHHHTCCEEEEECCCC-S--SCC-----GGGCCTHHHHHHHHHCTTSEEEEECCSSSSHHHH
T ss_pred C-----CHHHHHHHHH-HHHHcCCCEEEEeccCC-C--CCC-----hhhcCHHHHHHHHHHCCCCCEEeCCCCCcHHHHH
Confidence 2 3444443332 33456778888896432 2 111 1234577788887776689998776666667777
Q ss_pred HHHHcCcC
Q 017176 224 AALRKGAH 231 (376)
Q Consensus 224 ~~l~~Gad 231 (376)
.++..|||
T Consensus 224 AAvAlGA~ 231 (349)
T 2wqp_A 224 GAVALGGS 231 (349)
T ss_dssp HHHHHTCC
T ss_pred HHHHhCCC
Confidence 78888999
No 328
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=93.52 E-value=0.49 Score=43.92 Aligned_cols=159 Identities=12% Similarity=0.028 Sum_probs=87.0
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEec
Q 017176 63 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 142 (376)
Q Consensus 63 ~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR 142 (376)
.+.|+. =+...|. -.|++++++|||.|=+..++ ...+. .| |-....-..+.+...++.|.+.++.||++-+-
T Consensus 19 ~~~~i~-~~~a~D~----~sA~i~e~aGf~ai~vs~s~-~a~~~-lG-~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d 90 (287)
T 3b8i_A 19 SSRCYH-TASVFDP----MSARIAADLGFECGILGGSV-ASLQV-LA-APDFALITLSEFVEQATRIGRVARLPVIADAD 90 (287)
T ss_dssp SSCCEE-CEECCSH----HHHHHHHHTTCSCEEECHHH-HHHHH-HS-CCSSSCSCHHHHHHHHHHHHTTCSSCEEEECT
T ss_pred CCCcEE-EecCCCH----HHHHHHHHcCCCEEEeCcHH-HHHHh-cC-CCCCCCCCHHHHHHHHHHHHhcCCCCEEEECC
Confidence 444443 2445554 46788889999999774220 10000 00 11112345678888899999999999999999
Q ss_pred CCCCCCccHHHHHHHHHHHhhcCCccEEEEccCcc-ccCCCCCCCCCCCCccc--HHHHHHHHhhC--CCCeEEEecCC-
Q 017176 143 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA-LLNGISPAENRTIPPLK--YEYYYALLRDF--PDLTFTLNGGI- 216 (376)
Q Consensus 143 ~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~-~~~g~~~~~~~~~~~~~--~~~v~~~~~~~--~~ipVi~nGgI- 216 (376)
.|+.+ .+++.+.+.++. ++|++.|++-+... ..-|+. .+. +-+.. .+.|+.+++.. ++.-|++=-+-
T Consensus 91 ~Gyg~---~~~~~~~v~~l~-~aGa~gv~iED~~~pKrcgh~--~gk-l~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa 163 (287)
T 3b8i_A 91 HGYGN---ALNVMRTVVELE-RAGIAALTIEDTLLPAQFGRK--STD-LICVEEGVGKIRAALEARVDPALTIIARTNAE 163 (287)
T ss_dssp TCSSS---HHHHHHHHHHHH-HHTCSEEEEECBCCSCCTTTC--TTC-BCCHHHHHHHHHHHHHHCCSTTSEEEEEEETT
T ss_pred CCCCC---HHHHHHHHHHHH-HhCCeEEEEcCCCCccccCCC--CCC-ccCHHHHHHHHHHHHHcCCCCCcEEEEechhh
Confidence 98653 334444444444 59999999987652 111221 111 22211 22344444432 23444443332
Q ss_pred -CCHH----HHHHHHHcCcCeeEEc
Q 017176 217 -NTVD----EVNAALRKGAHHVMVG 236 (376)
Q Consensus 217 -~s~~----da~~~l~~Gad~VmiG 236 (376)
...+ ++..+.+.|||+|.+=
T Consensus 164 ~~gl~~ai~Ra~ay~eAGAd~i~~e 188 (287)
T 3b8i_A 164 LIDVDAVIQRTLAYQEAGADGICLV 188 (287)
T ss_dssp TSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred hcCHHHHHHHHHHHHHcCCCEEEec
Confidence 1112 2333344899999884
No 329
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=93.41 E-value=0.42 Score=45.02 Aligned_cols=96 Identities=15% Similarity=0.088 Sum_probs=64.3
Q ss_pred CCHHHHHHHHHHHhcccCccEEEEecCCCC-CCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccH
Q 017176 117 LDPKFVGEAMSVIAANTNVPVSVKCRIGVD-DHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 195 (376)
Q Consensus 117 ~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~-~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~ 195 (376)
..++.+.+.++.+++.++.|+.|-+-.... ...++++.++ .+.+.|+|.|++|.+.. .
T Consensus 50 ~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~----~~~~~g~d~V~~~~g~p-----------------~ 108 (328)
T 2gjl_A 50 PSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRA----AIIEAGIRVVETAGNDP-----------------G 108 (328)
T ss_dssp SSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHH----HHHHTTCCEEEEEESCC-----------------H
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHH----HHHhcCCCEEEEcCCCc-----------------H
Confidence 347888888999888777777665443210 0123444433 23468999999996421 3
Q ss_pred HHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEE-ch
Q 017176 196 EYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV-GR 237 (376)
Q Consensus 196 ~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~Vmi-GR 237 (376)
+.+..+.+ . ++||+. .+.+.+++..+.+.|+|+|.+ |+
T Consensus 109 ~~~~~l~~-~-gi~vi~--~v~t~~~a~~~~~~GaD~i~v~g~ 147 (328)
T 2gjl_A 109 EHIAEFRR-H-GVKVIH--KCTAVRHALKAERLGVDAVSIDGF 147 (328)
T ss_dssp HHHHHHHH-T-TCEEEE--EESSHHHHHHHHHTTCSEEEEECT
T ss_pred HHHHHHHH-c-CCCEEe--eCCCHHHHHHHHHcCCCEEEEECC
Confidence 44555544 3 788884 488999999988899999998 54
No 330
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=93.41 E-value=0.7 Score=44.31 Aligned_cols=97 Identities=18% Similarity=0.127 Sum_probs=64.3
Q ss_pred CCHHHHHHHHHHHhcccCccEEEEecCCCCC---Cc-----------------------------cHHHHHHHHHHHhhc
Q 017176 117 LDPKFVGEAMSVIAANTNVPVSVKCRIGVDD---HD-----------------------------SYNQLCDFIYKVSSL 164 (376)
Q Consensus 117 ~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~---~~-----------------------------~~~~~~~~i~~~~e~ 164 (376)
..++.+.+.++.+++.++.|+.|.+-..... .. .+++. ..++.+
T Consensus 45 ~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~~~ 120 (369)
T 3bw2_A 45 KTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAVEVYAHQLAGEAAWYETELGDPDGGRDDGYDAK----LAVLLD 120 (369)
T ss_dssp SCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHHHHHHHHTHHHHHHTTCCCCCSCSCSSTTHHHH----HHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHHHHHHHHHHHHHHHcCCCcCcccccccccHHHH----HHHHHh
Confidence 3578888888888887777877765332111 00 12222 233456
Q ss_pred CCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEE-ch
Q 017176 165 SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV-GR 237 (376)
Q Consensus 165 ~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~Vmi-GR 237 (376)
.|++.|.+|.+.. ..+.+.++.+. +++|+. .+.+.+++..+.+.|+|+|.+ |+
T Consensus 121 ~g~~~V~~~~g~~----------------~~~~i~~~~~~--g~~v~~--~v~t~~~a~~a~~~GaD~i~v~g~ 174 (369)
T 3bw2_A 121 DPVPVVSFHFGVP----------------DREVIARLRRA--GTLTLV--TATTPEEARAVEAAGADAVIAQGV 174 (369)
T ss_dssp SCCSEEEEESSCC----------------CHHHHHHHHHT--TCEEEE--EESSHHHHHHHHHTTCSEEEEECT
T ss_pred cCCCEEEEeCCCC----------------cHHHHHHHHHC--CCeEEE--ECCCHHHHHHHHHcCCCEEEEeCC
Confidence 8999999987531 14555565542 778776 578999999888899999999 65
No 331
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=93.37 E-value=1.2 Score=41.01 Aligned_cols=141 Identities=13% Similarity=0.159 Sum_probs=81.1
Q ss_pred HHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHH
Q 017176 81 KATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYK 160 (376)
Q Consensus 81 ~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~ 160 (376)
-.|+.++++|||.|=+...+ ..... | |-....-..+.+...++.|.+.++.||++-+-.|+.+ +.+...+.+.+
T Consensus 27 ~sA~~~~~aG~~ai~vsg~s-~a~~~--G-~pD~~~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~--~~~~~~~~v~~ 100 (275)
T 2ze3_A 27 ASARLLEAAGFTAIGTTSAG-IAHAR--G-RTDGQTLTRDEMGREVEAIVRAVAIPVNADIEAGYGH--APEDVRRTVEH 100 (275)
T ss_dssp HHHHHHHHHTCSCEEECHHH-HHHHS--C-CCSSSSSCHHHHHHHHHHHHHHCSSCEEEECTTCSSS--SHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECcHH-HHHhC--C-CCCCCCCCHHHHHHHHHHHHhhcCCCEEeecCCCCCC--CHHHHHHHHHH
Confidence 36777888999999775211 00011 1 1111234567788888888888889999999999753 23344444444
Q ss_pred HhhcCCccEEEEccCccccCCCCCCCCCCCCccc--HHHHHHHHhhCC--CCeEEEecCCCC--------H-HHHHHHH-
Q 017176 161 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK--YEYYYALLRDFP--DLTFTLNGGINT--------V-DEVNAAL- 226 (376)
Q Consensus 161 ~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~--~~~v~~~~~~~~--~ipVi~nGgI~s--------~-~da~~~l- 226 (376)
+. ++|++.|++-+.... .| ..+-+.. .+.|+.+++... ++|+..+|.... . +.+++++
T Consensus 101 l~-~aGaagv~iED~~~~-~~------k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~ 172 (275)
T 2ze3_A 101 FA-ALGVAGVNLEDATGL-TP------TELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVR 172 (275)
T ss_dssp HH-HTTCSEEEEECBCSS-SS------SCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHH
T ss_pred HH-HcCCcEEEECCCcCC-CC------CccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHH
Confidence 44 699999999876531 11 1111111 223333333211 577777776654 1 2233322
Q ss_pred ------HcCcCeeEE
Q 017176 227 ------RKGAHHVMV 235 (376)
Q Consensus 227 ------~~Gad~Vmi 235 (376)
+.|||+|.+
T Consensus 173 Ra~ay~eAGAd~i~~ 187 (275)
T 2ze3_A 173 RGQAYADAGADGIFV 187 (275)
T ss_dssp HHHHHHHTTCSEEEC
T ss_pred HHHHHHHCCCCEEEE
Confidence 369999988
No 332
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=93.35 E-value=1 Score=43.93 Aligned_cols=123 Identities=7% Similarity=0.025 Sum_probs=81.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccH
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~ 151 (376)
..++.+++.++...+.||..+-+..|.. . +...+.++++|+.+ ++.+.|-..-+|+ .
T Consensus 187 ~~~~~~~~~a~~~~~~G~~~~K~k~g~~-------------~----~~~~~~v~~vR~~~g~~~~l~vDaN~~~~----~ 245 (412)
T 4h1z_A 187 DTRAKRAELAAAWQAKGFSSFKFASPVA-------------D----DGVAKEMEILRERLGPAVRIACDMHWAHT----A 245 (412)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEGGGC-------------T----TCHHHHHHHHHHHHCSSSEEEEECCSCCC----H
T ss_pred CcHHHHHHHHHHHHhcCcceeccccccc-------------h----hhHHHHHHHHHhccCCeEEEEeccccCCC----H
Confidence 4688888888888889999998753211 1 11234456677665 3455554444553 4
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCc
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGA 230 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Ga 230 (376)
++.+++ .+.+++.|+.+|. . .+++-+++.++++.+.. ++||.+.=.+.+..++.++++ ..+
T Consensus 246 ~~A~~~-~~~l~~~~l~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~ 307 (412)
T 4h1z_A 246 SEAVAL-IKAMEPHGLWFAE----A------------PVRTEDIDGLARVAASV-STAIAVGEEWRTVHDMVPRVARRAL 307 (412)
T ss_dssp HHHHHH-HHHHGGGCEEEEE----C------------CSCTTCHHHHHHHHHHC-SSEEEECTTCCSHHHHHHHHHTTCC
T ss_pred HHHHHH-HHhhcccccceec----C------------CCCccchHHHHHHHhhc-CCccccCCcccchHhHHHHHHcCCC
Confidence 454554 3456778887764 1 12233477777887775 899999889999999999998 456
Q ss_pred CeeEE
Q 017176 231 HHVMV 235 (376)
Q Consensus 231 d~Vmi 235 (376)
|.|++
T Consensus 308 div~~ 312 (412)
T 4h1z_A 308 AIVQP 312 (412)
T ss_dssp SEECC
T ss_pred CEEEe
Confidence 76653
No 333
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=93.32 E-value=1.9 Score=41.24 Aligned_cols=122 Identities=11% Similarity=0.004 Sum_probs=81.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 152 (376)
+++++.+.++.+.+.||..+-+..|. +++.-.+.++++++.+ ++.+.+-..-+|+ .+
T Consensus 144 ~~~~~~~~a~~~~~~G~~~~KiKvG~-----------------~~~~d~~~v~avr~a~g~~~~l~vDaN~~~~----~~ 202 (372)
T 3cyj_A 144 PLRRLQEQLGGWAAAGIPRVKMKVGR-----------------EPEKDPERVRAAREAIGESVELMVDANGAYT----RK 202 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCS-----------------SGGGHHHHHHHHHHHHCTTSEEEEECTTCSC----HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCC-----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCC----HH
Confidence 45778777777778899999885431 2334456677777765 3556665555554 44
Q ss_pred HHHHHHHHHhhcC-CccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCC-CeEEEecCCCCHHHHHHHHHcCc
Q 017176 153 QLCDFIYKVSSLS-PTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPD-LTFTLNGGINTVDEVNAALRKGA 230 (376)
Q Consensus 153 ~~~~~i~~~~e~~-Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~-ipVi~nGgI~s~~da~~~l~~Ga 230 (376)
+.++++. .+++. ++.+|. . .+++-+++..+++.+..+. +||.+.=.+.+..++.++ ...+
T Consensus 203 ~a~~~~~-~l~~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~-~~a~ 264 (372)
T 3cyj_A 203 QALYWAG-AFAREAGISYLE----E------------PVSSEDREGLRLLRDRGPGGVAIAAGEYEWTLPQLHDL-AGCV 264 (372)
T ss_dssp HHHHHHH-HHHHHHCCCEEE----C------------SSCTTCHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHH-HTTC
T ss_pred HHHHHHH-HHHhhcCCcEEE----C------------CCCcccHHHHHHHHHhCCCCCCEECCCCccCHHHHHHH-hCCC
Confidence 5555544 35667 777765 1 1223347777777776532 799998899999999988 7678
Q ss_pred CeeEE
Q 017176 231 HHVMV 235 (376)
Q Consensus 231 d~Vmi 235 (376)
|.|++
T Consensus 265 d~i~i 269 (372)
T 3cyj_A 265 DILQA 269 (372)
T ss_dssp SEEEE
T ss_pred CEEec
Confidence 99887
No 334
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=93.29 E-value=0.32 Score=42.90 Aligned_cols=97 Identities=16% Similarity=0.150 Sum_probs=57.2
Q ss_pred HHHHHHhcccCccEEEEecCCCCC-----CccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHH
Q 017176 124 EAMSVIAANTNVPVSVKCRIGVDD-----HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYY 198 (376)
Q Consensus 124 eiv~~v~~~~~~pv~vKiR~g~~~-----~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v 198 (376)
+.++++++.++.|+...++..+.+ ..+.+++ .. +.++|+|.+++|..... .+ . ....+.+
T Consensus 46 ~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i----~~-~~~~Gad~v~l~~~~~~----~p----~--~~~~~~i 110 (223)
T 1y0e_A 46 EDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEV----DE-LIESQCEVIALDATLQQ----RP----K--ETLDELV 110 (223)
T ss_dssp HHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHH----HH-HHHHTCSEEEEECSCSC----CS----S--SCHHHHH
T ss_pred HHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHH----HH-HHhCCCCEEEEeeeccc----Cc----c--cCHHHHH
Confidence 345566666788884322222111 0122222 22 23589999999964321 00 0 0114566
Q ss_pred HHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEch
Q 017176 199 YALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 237 (376)
Q Consensus 199 ~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGR 237 (376)
..+++.+++++++. ++.+.+++.++.+.|+|.|+++-
T Consensus 111 ~~~~~~~~~~~v~~--~~~t~~e~~~~~~~G~d~i~~~~ 147 (223)
T 1y0e_A 111 SYIRTHAPNVEIMA--DIATVEEAKNAARLGFDYIGTTL 147 (223)
T ss_dssp HHHHHHCTTSEEEE--ECSSHHHHHHHHHTTCSEEECTT
T ss_pred HHHHHhCCCceEEe--cCCCHHHHHHHHHcCCCEEEeCC
Confidence 67776666777765 67899999988889999998753
No 335
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=93.24 E-value=0.22 Score=48.49 Aligned_cols=61 Identities=15% Similarity=0.215 Sum_probs=44.1
Q ss_pred hhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEc
Q 017176 162 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 236 (376)
Q Consensus 162 ~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiG 236 (376)
+.++|+|.|.+.... |.+ ....+.+.++++.+ ++|||+ |++.|.+++..+.+.|||+|.+|
T Consensus 152 lveaGvdvIvldta~----G~~--------~~~~e~I~~ik~~~-~i~Vi~-g~V~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 152 LVEAGVDVIVLDSAH----GHS--------LNIIRTLKEIKSKM-NIDVIV-GNVVTEEATKELIENGADGIKVG 212 (400)
T ss_dssp HHHHTCSEEEECCSC----CSB--------HHHHHHHHHHHTTC-CCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHcCCCEEEEeCCC----CCc--------ccHHHHHHHHHhcC-CCeEEE-eecCCHHHHHHHHHcCCCEEEEe
Confidence 346899999874221 110 11145667777665 888886 78899999999999999999996
No 336
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=93.20 E-value=1.4 Score=42.26 Aligned_cols=121 Identities=7% Similarity=0.031 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHHH
Q 017176 76 LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQ 153 (376)
Q Consensus 76 ~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 153 (376)
+++.++.++...+.||..+-+..|. +++.-.+.++++|+.+ ++.+.|-.--+|+ .++
T Consensus 145 ~~~~~~~~~~~~~~Gf~~~K~k~g~-----------------~~~~di~~v~avr~~~g~~~~l~vDaN~~~~----~~~ 203 (378)
T 4hpn_A 145 VSDNASEMAERRAEGFHACKIKIGF-----------------GVEEDLRVIAAVREAIGPDMRLMIDANHGYT----VTE 203 (378)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCS-----------------CHHHHHHHHHHHHHHHTTTSEEEEECTTCCC----HHH
T ss_pred HHHHHHHHHHHHHhccceecccccC-----------------ChHHHHHHHHHHHHhcCCcEEEEEecCcccC----HHH
Confidence 3444555555556799998775431 2455567788888876 4555555555553 445
Q ss_pred HHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcCe
Q 017176 154 LCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHH 232 (376)
Q Consensus 154 ~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad~ 232 (376)
.++++ +.+++.++.+|. ..+++-+++.++++.+.. ++||.+.=.+.+..++.++++ ..+|.
T Consensus 204 A~~~~-~~l~~~~i~~iE----------------eP~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~a~d~ 265 (378)
T 4hpn_A 204 AITLG-DRAAGFGIDWFE----------------EPVVPEQLDAYARVRAGQ-PIPVAGGETWHGRYGMWQALSAGAVDI 265 (378)
T ss_dssp HHHHH-HHHGGGCCSCEE----------------CCSCTTCHHHHHHHHHHS-SSCEEECTTCCHHHHHHHHHHTTCCSE
T ss_pred HHHHH-hhhhhcccchhh----------------cCCCccchhhhHHHHhhC-CceeeCCcCccchHhHHHHHHcCCCCE
Confidence 55543 445677877655 112333477777887765 899999999999999999998 56788
Q ss_pred eEE
Q 017176 233 VMV 235 (376)
Q Consensus 233 Vmi 235 (376)
|++
T Consensus 266 i~~ 268 (378)
T 4hpn_A 266 LQP 268 (378)
T ss_dssp ECC
T ss_pred Eee
Confidence 754
No 337
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=93.20 E-value=0.38 Score=42.89 Aligned_cols=135 Identities=14% Similarity=0.124 Sum_probs=77.7
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecC--CCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 64 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNC--GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 64 ~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~--gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
...++..|...+...+.+.++.+.+.|+|.|.+-. |.-.++ . .+| .++++++++.++.|+.|-+
T Consensus 6 ~~~i~psi~a~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~-~---~~~----------~~~~~~lr~~~~~~~~v~l 71 (228)
T 1h1y_A 6 AAKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPN-L---TIG----------APVIQSLRKHTKAYLDCHL 71 (228)
T ss_dssp CCEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSC-B---CBC----------HHHHHHHHTTCCSEEEEEE
T ss_pred CCeEEEEeeeCCHHHHHHHHHHHHHcCCCEEEEEEecCCcCcc-h---hhC----------HHHHHHHHhhcCCcEEEEE
Confidence 34477788888888899999999999999876642 211111 0 122 2667777777666666544
Q ss_pred cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCccc-HHHHHHHHhhCCCCeEEEecCCCCHH
Q 017176 142 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK-YEYYYALLRDFPDLTFTLNGGINTVD 220 (376)
Q Consensus 142 R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~-~~~v~~~~~~~~~ipVi~nGgI~s~~ 220 (376)
-. .+...+ + ...+ ++|+|.|++|+.... .. .+.+.++.+ . ++.++..=.-.++.
T Consensus 72 mv--~d~~~~---i---~~~~-~agad~v~vH~~~~~--------------~~~~~~~~~i~~-~-g~~igv~~~p~t~~ 126 (228)
T 1h1y_A 72 MV--TNPSDY---V---EPLA-KAGASGFTFHIEVSR--------------DNWQELIQSIKA-K-GMRPGVSLRPGTPV 126 (228)
T ss_dssp ES--SCGGGG---H---HHHH-HHTCSEEEEEGGGCT--------------TTHHHHHHHHHH-T-TCEEEEEECTTSCG
T ss_pred Ee--cCHHHH---H---HHHH-HcCCCEEEECCCCcc--------------cHHHHHHHHHHH-c-CCCEEEEEeCCCCH
Confidence 43 222221 1 1222 489999999986421 01 233444443 3 55555433334443
Q ss_pred H-HHHHHHc--CcCeeEEch
Q 017176 221 E-VNAALRK--GAHHVMVGR 237 (376)
Q Consensus 221 d-a~~~l~~--Gad~VmiGR 237 (376)
+ ++..+.. ++|.|.++.
T Consensus 127 e~~~~~~~~~~~~d~vl~~s 146 (228)
T 1h1y_A 127 EEVFPLVEAENPVELVLVMT 146 (228)
T ss_dssp GGGHHHHHSSSCCSEEEEES
T ss_pred HHHHHHHhcCCCCCEEEEEe
Confidence 3 3344444 899999853
No 338
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=93.15 E-value=1.5 Score=42.33 Aligned_cols=132 Identities=11% Similarity=0.053 Sum_probs=80.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEe-----------cCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecC
Q 017176 75 NLDNLAKATELANAYNYDEINL-----------NCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI 143 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~Iei-----------N~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~ 143 (376)
..+.+....+.+++.|.+.+-- ..++|.-+ -||.-+++..++.++-+ ++.||.+|.-+
T Consensus 99 ~~e~~~~L~~~~~~~Gi~~~stpfD~~svd~l~~~~vd~~K------IgS~~~~N~pLL~~va~-----~gKPViLStGm 167 (385)
T 1vli_A 99 PAEWILPLLDYCREKQVIFLSTVCDEGSADLLQSTSPSAFK------IASYEINHLPLLKYVAR-----LNRPMIFSTAG 167 (385)
T ss_dssp CGGGHHHHHHHHHHTTCEEECBCCSHHHHHHHHTTCCSCEE------ECGGGTTCHHHHHHHHT-----TCSCEEEECTT
T ss_pred CHHHHHHHHHHHHHcCCcEEEccCCHHHHHHHHhcCCCEEE------ECcccccCHHHHHHHHh-----cCCeEEEECCC
Confidence 3456666666666766544421 12344433 26667788877666533 58999998765
Q ss_pred CCCCCccHHHHHHHHHHHhhcCCc-cEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCC-HHH
Q 017176 144 GVDDHDSYNQLCDFIYKVSSLSPT-RHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINT-VDE 221 (376)
Q Consensus 144 g~~~~~~~~~~~~~i~~~~e~~Gv-d~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s-~~d 221 (376)
. +++|+...+ ..+.+.|. +.+.+|+-+. | ..+ ...+++..+..+++.++++||..++--.. ..-
T Consensus 168 a-----Tl~Ei~~Av-e~i~~~Gn~~iiLlhc~s~-Y--Ptp-----~~~~nL~aI~~Lk~~f~~lpVG~SdHt~G~~~~ 233 (385)
T 1vli_A 168 A-----EISDVHEAW-RTIRAEGNNQIAIMHCVAK-Y--PAP-----PEYSNLSVIPMLAAAFPEAVIGFSDHSEHPTEA 233 (385)
T ss_dssp C-----CHHHHHHHH-HHHHTTTCCCEEEEEECSS-S--SCC-----GGGCCTTHHHHHHHHSTTSEEEEEECCSSSSHH
T ss_pred C-----CHHHHHHHH-HHHHHCCCCcEEEEeccCC-C--CCC-----hhhcCHHHHHHHHHHcCCCCEEeCCCCCCchHH
Confidence 3 344544433 33456787 6677785332 2 111 12345667777777766899977766555 677
Q ss_pred HHHHHHcCcC
Q 017176 222 VNAALRKGAH 231 (376)
Q Consensus 222 a~~~l~~Gad 231 (376)
+..++..||+
T Consensus 234 ~~AAvAlGA~ 243 (385)
T 1vli_A 234 PCAAVRLGAK 243 (385)
T ss_dssp HHHHHHTTCS
T ss_pred HHHHHHcCCC
Confidence 7778888999
No 339
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=93.09 E-value=0.29 Score=45.69 Aligned_cols=63 Identities=14% Similarity=0.216 Sum_probs=46.6
Q ss_pred cCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhh-CCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhC
Q 017176 164 LSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-FPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 242 (376)
Q Consensus 164 ~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~-~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 242 (376)
++|+|.|-+...+ .+.+++.++. .+++++.++||| +.+.+.+..++|+|++.+|.....-
T Consensus 227 ~aGaD~I~LDn~~------------------~~~l~~av~~i~~~v~ieaSGGI-~~~~i~~~a~tGVD~isvG~lt~sa 287 (298)
T 3gnn_A 227 AHGARSVLLDNFT------------------LDMMRDAVRVTEGRAVLEVSGGV-NFDTVRAIAETGVDRISIGALTKDV 287 (298)
T ss_dssp HTTCEEEEEESCC------------------HHHHHHHHHHHTTSEEEEEESSC-STTTHHHHHHTTCSEEECGGGGTSC
T ss_pred HcCCCEEEECCCC------------------HHHHHHHHHHhCCCCeEEEEcCC-CHHHHHHHHHcCCCEEEECCeecCC
Confidence 4899999987643 2333333332 347899999999 7888888889999999999966555
Q ss_pred Cch
Q 017176 243 PWY 245 (376)
Q Consensus 243 P~l 245 (376)
|++
T Consensus 288 ~~l 290 (298)
T 3gnn_A 288 RAT 290 (298)
T ss_dssp CCC
T ss_pred Ccc
Confidence 654
No 340
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=93.07 E-value=1.5 Score=42.39 Aligned_cols=128 Identities=15% Similarity=0.216 Sum_probs=84.9
Q ss_pred CEEEEecCCC-HHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecC
Q 017176 66 PIVLQIGGSN-LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRI 143 (376)
Q Consensus 66 p~~vQL~g~~-~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~ 143 (376)
|+...+...+ ++.+.+.++...+.||..+-+..| | + .+. +.+++||+.+ ++.+.+-..-
T Consensus 139 ~~~~~~~~~~~~e~~~~~~~~~~~~G~~~~K~Kv~-~----------~----~d~----~~v~avR~~~~~~~l~vDaN~ 199 (388)
T 3qld_A 139 EVSATLGMSESLDVLIQSVDAAVEQGFRRVKLKIA-P----------G----RDR----AAIKAVRLRYPDLAIAADANG 199 (388)
T ss_dssp EBEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECB-T----------T----BSH----HHHHHHHHHCTTSEEEEECTT
T ss_pred EEeEEecCCCCHHHHHHHHHHHHHhCCCeEEEEeC-c----------H----HHH----HHHHHHHHHCCCCeEEEECCC
Confidence 4444455444 999999998888889999988653 1 1 233 4566666655 4556665555
Q ss_pred CCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHH
Q 017176 144 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVN 223 (376)
Q Consensus 144 g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~ 223 (376)
+|+.. +... + +.+++.++.+|- ..+++.+++..+++.+.. ++||.+.=.+.+..++.
T Consensus 200 ~~~~~----~A~~-~-~~l~~~~i~~iE----------------eP~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~ 256 (388)
T 3qld_A 200 SYRPE----DAPV-L-RQLDAYDLQFIE----------------QPLPEDDWFDLAKLQASL-RTPVCLDESVRSVRELK 256 (388)
T ss_dssp CCCGG----GHHH-H-HHGGGGCCSCEE----------------CCSCTTCHHHHHHHHHHC-SSCEEESTTCCSHHHHH
T ss_pred CCChH----HHHH-H-HHHhhCCCcEEE----------------CCCCcccHHHHHHHHHhC-CCCEEeCCCCCCHHHHH
Confidence 66542 2222 2 445667776654 112333467777777765 89999988899999999
Q ss_pred HHHH-cCcCeeEE
Q 017176 224 AALR-KGAHHVMV 235 (376)
Q Consensus 224 ~~l~-~Gad~Vmi 235 (376)
++++ ..+|.|++
T Consensus 257 ~~~~~~a~d~v~~ 269 (388)
T 3qld_A 257 LTARLGAARVLNV 269 (388)
T ss_dssp HHHHHTCCSEEEE
T ss_pred HHHHcCCCCEEEE
Confidence 9998 55898887
No 341
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=93.03 E-value=0.93 Score=43.69 Aligned_cols=120 Identities=18% Similarity=0.235 Sum_probs=80.5
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccHH
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~ 152 (376)
.+++++.+.++.+.+.||..+-+..| | ..+. +.+++||+.+ ++.+.+-..-+|+. +
T Consensus 160 ~~~~~~~~~a~~~~~~G~~~~KiKvg-~--------------~~d~----~~v~avr~a~~~~~l~vDaN~~~~~-~--- 216 (386)
T 1wue_A 160 EDLPQLLKQVQLAVEKGYQRVKLKIR-P--------------GYDV----EPVALIRQHFPNLPLMVDANSAYTL-A--- 216 (386)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEECB-T--------------TBSH----HHHHHHHHHCTTSCEEEECTTCCCG-G---
T ss_pred CCHHHHHHHHHHHHHhhhheEEEeeC-c--------------HHHH----HHHHHHHHhCCCCeEEEeCCCCCCH-H---
Confidence 46888988888887889999988643 1 1233 4456666654 45566666656653 2
Q ss_pred HHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcC
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAH 231 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad 231 (376)
+. ++ .+.+++.++.+|. . .+++-+++..+++.+.. ++||.+.=.+.+..++.++++ ..+|
T Consensus 217 ~a-~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~a~d 277 (386)
T 1wue_A 217 DL-PQ-LQRLDHYQLAMIE----Q------------PFAADDFLDHAQLQREL-KTRICLDENIRSLKDCQVALALGSCR 277 (386)
T ss_dssp GH-HH-HHGGGGSCCSCEE----C------------CSCTTCSHHHHHHHTTC-SSCEEECTTCCSHHHHHHHHHHTCCS
T ss_pred HH-HH-HHHHHhCCCeEEe----C------------CCCcccHHHHHHHHHhc-CCCEEeCCccCCHHHHHHHHHcCCCC
Confidence 22 33 3456777777665 1 12223366667776654 899999888999999999998 5589
Q ss_pred eeEE
Q 017176 232 HVMV 235 (376)
Q Consensus 232 ~Vmi 235 (376)
.|++
T Consensus 278 ~i~i 281 (386)
T 1wue_A 278 SINL 281 (386)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8887
No 342
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=92.97 E-value=0.14 Score=51.16 Aligned_cols=63 Identities=24% Similarity=0.335 Sum_probs=48.4
Q ss_pred hhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEch
Q 017176 162 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 237 (376)
Q Consensus 162 ~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGR 237 (376)
+.++|+|.|.+|... |. ....++.+.++++.++++||+. |++.+.+++..+.+.|+|+|.+|-
T Consensus 245 l~~aGvd~v~i~~~~----G~--------~~~~~e~i~~i~~~~p~~pvi~-g~~~t~e~a~~l~~~G~d~I~v~~ 307 (494)
T 1vrd_A 245 LVKAGVDVIVIDTAH----GH--------SRRVIETLEMIKADYPDLPVVA-GNVATPEGTEALIKAGADAVKVGV 307 (494)
T ss_dssp HHHTTCSEEEECCSC----CS--------SHHHHHHHHHHHHHCTTSCEEE-EEECSHHHHHHHHHTTCSEEEECS
T ss_pred HHHhCCCEEEEEecC----Cc--------hHHHHHHHHHHHHHCCCceEEe-CCcCCHHHHHHHHHcCCCEEEEcC
Confidence 346899999997642 21 1123678888888877899876 788999999988889999999843
No 343
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=92.93 E-value=0.54 Score=43.76 Aligned_cols=100 Identities=11% Similarity=0.073 Sum_probs=64.0
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecC
Q 017176 64 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI 143 (376)
Q Consensus 64 ~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~ 143 (376)
+.|+. =+...|. -.|++++++|||.|=+...+ ...+ .| |-....-..+.+...++.|.+.++.||++-+-.
T Consensus 14 ~~~i~-~~~a~D~----~sA~~~~~aG~~ai~vs~~~-~a~~--~G-~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~ 84 (290)
T 2hjp_A 14 GRLFT-AMAAHNP----LVAKLAEQAGFGGIWGSGFE-LSAS--YA-VPDANILSMSTHLEMMRAIASTVSIPLIADIDT 84 (290)
T ss_dssp CCCEE-EEECSSH----HHHHHHHHHTCSEEEECHHH-HHHH--TT-SCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTT
T ss_pred CCcEE-EecCCCH----HHHHHHHHcCCCEEEEChHH-HHHh--CC-CCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 34443 3455564 36778888999999775210 0000 01 111123456788888999999999999999999
Q ss_pred CCCCCccHHHHHHHHHHHhhcCCccEEEEccCc
Q 017176 144 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK 176 (376)
Q Consensus 144 g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~ 176 (376)
|+.+ .+...+.+.++. ++|++.|++-+..
T Consensus 85 Gyg~---~~~~~~~v~~l~-~aGa~gv~iED~~ 113 (290)
T 2hjp_A 85 GFGN---AVNVHYVVPQYE-AAGASAIVMEDKT 113 (290)
T ss_dssp TTSS---HHHHHHHHHHHH-HHTCSEEEEECBC
T ss_pred CCCC---HHHHHHHHHHHH-HhCCeEEEEcCCC
Confidence 9653 334444444444 5999999998765
No 344
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=92.93 E-value=1.9 Score=39.67 Aligned_cols=156 Identities=12% Similarity=0.092 Sum_probs=88.5
Q ss_pred CCChHHHHHHHHHhCCCcEEEecceeec-ccccccc---hhhhhh------ccCCCCCCEEEEec-C--CCHHHHHHHHH
Q 017176 18 DWTDNHYRTLARLISKHAWLYTEMLAAE-TIIYQQG---NLDRFL------AFSPEQHPIVLQIG-G--SNLDNLAKATE 84 (376)
Q Consensus 18 ~~td~~~r~~~~~~Gg~gl~~te~v~~~-~~~~~~~---~~~~~~------~~~~~~~p~~vQL~-g--~~~~~~~~aa~ 84 (376)
+.-|..+.+++.+.| ++.+.|+-.... .+.+.+. ..+.++ .......|+++-+= | .++++..+.+.
T Consensus 35 tayDa~sA~l~e~aG-~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~~a~ 113 (275)
T 3vav_A 35 TCYDASFAALLDRAN-VDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAFASAV 113 (275)
T ss_dssp ECCSHHHHHHHHHTT-CSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSSHHHHHHHHH
T ss_pred eCcCHHHHHHHHHcC-CCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCCHHHHHHHHH
Confidence 556888888888876 888776632211 1111111 111111 11223356776652 3 47888888777
Q ss_pred HHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecC---------CC----CCCccH
Q 017176 85 LANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI---------GV----DDHDSY 151 (376)
Q Consensus 85 ~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~---------g~----~~~~~~ 151 (376)
++.++|+++|.|--| ....+.++++++ .++|+.--+.+ |+ .+....
T Consensus 114 rl~kaGa~aVklEdg--------------------~~~~~~i~~l~~-~GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a 172 (275)
T 3vav_A 114 KLMRAGAQMVKFEGG--------------------EWLAETVRFLVE-RAVPVCAHVGLTPQSVHAFGGFKVQGKTEAGA 172 (275)
T ss_dssp HHHHTTCSEEEEECC--------------------GGGHHHHHHHHH-TTCCEEEEEESCGGGHHHHC---CCCCSHHHH
T ss_pred HHHHcCCCEEEECCc--------------------hhHHHHHHHHHH-CCCCEEEecCCCceEEeccCCeEEEcCCHHHH
Confidence 777779999988532 123445555554 36676543221 11 111224
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecC
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG 215 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGg 215 (376)
+++++. ++.++++|++.|.+.+-. -+..+++.++. ++|+|+-|-
T Consensus 173 ~~~i~r-A~a~~eAGA~~ivlE~vp------------------~~~a~~It~~l-~iP~igIGa 216 (275)
T 3vav_A 173 AQLLRD-ARAVEEAGAQLIVLEAVP------------------TLVAAEVTREL-SIPTIGIGA 216 (275)
T ss_dssp HHHHHH-HHHHHHHTCSEEEEESCC------------------HHHHHHHHHHC-SSCEEEESS
T ss_pred HHHHHH-HHHHHHcCCCEEEecCCC------------------HHHHHHHHHhC-CCCEEEEcc
Confidence 455554 456788999999987632 23455666665 899998763
No 345
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=92.87 E-value=1 Score=43.51 Aligned_cols=110 Identities=13% Similarity=0.093 Sum_probs=63.5
Q ss_pred ccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCcc-EEEEccCccccCCCCCCCCCC
Q 017176 111 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTR-HFIIHSRKALLNGISPAENRT 189 (376)
Q Consensus 111 yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd-~I~vh~r~~~~~g~~~~~~~~ 189 (376)
-|+..+.+.+++.. +. .++.||.+|.-.. .+++|+...+.. +.+.|.. .+.+|.++..|....
T Consensus 231 Igs~~~~n~~LL~~----~a-~~gkPVilk~G~~----~t~~e~~~Ave~-i~~~Gn~~i~L~~rG~s~yp~~~------ 294 (385)
T 3nvt_A 231 IGARNMQNFELLKA----AG-RVDKPILLKRGLS----ATIEEFIGAAEY-IMSQGNGKIILCERGIRTYEKAT------ 294 (385)
T ss_dssp ECGGGTTCHHHHHH----HH-TSSSCEEEECCTT----CCHHHHHHHHHH-HHTTTCCCEEEEECCBCCSCCSS------
T ss_pred ECcccccCHHHHHH----HH-ccCCcEEEecCCC----CCHHHHHHHHHH-HHHcCCCeEEEEECCCCCCCCCC------
Confidence 36667777654444 33 3689999996652 235555544443 3457774 555676664332110
Q ss_pred CCcccHHHHHHHHhhCCCCeEEEe----cCCCCH--HHHHHHHHcCcCeeEEch
Q 017176 190 IPPLKYEYYYALLRDFPDLTFTLN----GGINTV--DEVNAALRKGAHHVMVGR 237 (376)
Q Consensus 190 ~~~~~~~~v~~~~~~~~~ipVi~n----GgI~s~--~da~~~l~~Gad~VmiGR 237 (376)
...+++..+..+++.+ ++||+.. +|-++. .-+..+...||||++|=+
T Consensus 295 ~~~ldl~~i~~lk~~~-~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~ 347 (385)
T 3nvt_A 295 RNTLDISAVPILKKET-HLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEV 347 (385)
T ss_dssp SSBCCTTHHHHHHHHB-SSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEB
T ss_pred ccccCHHHHHHHHHhc-CCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEe
Confidence 1123466666666655 8999665 222222 335566778999999854
No 346
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=92.77 E-value=0.6 Score=43.55 Aligned_cols=100 Identities=10% Similarity=0.090 Sum_probs=60.6
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecC-CCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 63 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNC-GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 63 ~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~-gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
.+.|+. =+...|+ -.|+.++++|||.|=+.. ++-.. ....| ...-..+.+...++.|.+.+++||++-+
T Consensus 17 ~~~~i~-~~~a~D~----~sA~~~~~aG~~ai~vsg~~~a~~-lG~pD----~~~vt~~em~~~~~~I~~~~~~PviaD~ 86 (295)
T 1s2w_A 17 SKDLEF-IMEAHNG----LSARIVQEAGFKGIWGSGLSVSAQ-LGVRD----SNEASWTQVVEVLEFMSDASDVPILLDA 86 (295)
T ss_dssp SSSCEE-EEEECSH----HHHHHHHHHTCSCEEECCHHHHHT-C-------------CHHHHHHHHHHHHTCSSCEEEEC
T ss_pred CCCcEE-EecCCCH----HHHHHHHHcCCCEEEeChHHHHHh-CCCCC----CCCCCHHHHHHHHHHHHhcCCCCEEecC
Confidence 444443 2444554 367778888999997752 11110 01111 1122446677788888888899999999
Q ss_pred cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCc
Q 017176 142 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK 176 (376)
Q Consensus 142 R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~ 176 (376)
-.|+.+. +.+.+.+.++ +++|+++|++-+..
T Consensus 87 d~Gyg~~---~~v~~~v~~l-~~aGaagv~iED~~ 117 (295)
T 1s2w_A 87 DTGYGNF---NNARRLVRKL-EDRGVAGACLEDKL 117 (295)
T ss_dssp CSSCSSH---HHHHHHHHHH-HHTTCCEEEEECBC
T ss_pred CCCCCCH---HHHHHHHHHH-HHcCCcEEEECCCC
Confidence 9986542 3444444444 47999999998764
No 347
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=92.76 E-value=0.94 Score=43.51 Aligned_cols=42 Identities=21% Similarity=0.299 Sum_probs=35.6
Q ss_pred ccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEc
Q 017176 193 LKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 236 (376)
Q Consensus 193 ~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiG 236 (376)
..|+.+.++++.. ++||+. +++.+++++..+.+.|+|+|.++
T Consensus 212 ~~~~~i~~l~~~~-~~pv~v-K~~~~~e~a~~a~~~Gad~I~vs 253 (370)
T 1gox_A 212 LSWKDVAWLQTIT-SLPILV-KGVITAEDARLAVQHGAAGIIVS 253 (370)
T ss_dssp CCHHHHHHHHHHC-CSCEEE-ECCCSHHHHHHHHHTTCSEEEEC
T ss_pred chHHHHHHHHHHh-CCCEEE-EecCCHHHHHHHHHcCCCEEEEC
Confidence 4577788888775 899985 77899999999999999999994
No 348
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=92.55 E-value=0.85 Score=42.44 Aligned_cols=110 Identities=9% Similarity=0.068 Sum_probs=60.6
Q ss_pred ccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEE-EEccCccccCCCCCCCCCC
Q 017176 111 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHF-IIHSRKALLNGISPAENRT 189 (376)
Q Consensus 111 yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I-~vh~r~~~~~g~~~~~~~~ 189 (376)
-|+..+++.+++.++ . .++.||.+|.-...+ .+++...+ . .+...|...+ .+|.++ .+ ++..
T Consensus 114 IgA~~~~n~~Ll~~~----a-~~~kPV~lk~G~~~t-~~ei~~Av---~-~i~~~Gn~~i~L~~rg~-~~-~y~~----- 176 (292)
T 1o60_A 114 LPAFLARQTDLVEAM----A-KTGAVINVKKPQFLS-PSQMGNIV---E-KIEECGNDKIILCDRGT-NF-GYDN----- 176 (292)
T ss_dssp ECGGGTTCHHHHHHH----H-HTTCEEEEECCTTSC-GGGHHHHH---H-HHHHTTCCCEEEEECCE-EC-STTC-----
T ss_pred ECcccccCHHHHHHH----H-cCCCcEEEeCCCCCC-HHHHHHHH---H-HHHHcCCCeEEEEECCC-CC-CCCc-----
Confidence 377788888855554 3 358999999766322 22333332 2 3346787544 445444 22 1110
Q ss_pred CCcccHHHHHHHHhhCCCCeEEEe-----------cCCCCH------HHHHHHHHcCcCeeEEchH
Q 017176 190 IPPLKYEYYYALLRDFPDLTFTLN-----------GGINTV------DEVNAALRKGAHHVMVGRA 238 (376)
Q Consensus 190 ~~~~~~~~v~~~~~~~~~ipVi~n-----------GgI~s~------~da~~~l~~Gad~VmiGRa 238 (376)
...++..+..+++.++++||+.+ |+-... .-+..+.+.||||+||=+=
T Consensus 177 -~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~Ga~Gl~IE~H 241 (292)
T 1o60_A 177 -LIVDMLGFSVMKKASKGSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIAGLFLEAH 241 (292)
T ss_dssp -EECCTTHHHHHHHHTTSCCEEEEHHHHCC------------CTTHHHHHHHHHHHCCSEEEEEEE
T ss_pred -cccCHHHHHHHHhhCCCCCEEEECCCcccccCccccCCCCChhHHHHHHHHHHHcCCCEEEEEec
Confidence 11345566666666557899982 222222 3344556689999998553
No 349
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=92.46 E-value=0.51 Score=41.90 Aligned_cols=129 Identities=12% Similarity=0.087 Sum_probs=73.3
Q ss_pred EEEEecCCCHHHHHHHHHHHHHCCCCEEEecC--CCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCC
Q 017176 67 IVLQIGGSNLDNLAKATELANAYNYDEINLNC--GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIG 144 (376)
Q Consensus 67 ~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~--gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g 144 (376)
++.-|.+.++..+.+.++.+.+.|+|.|++.. |.-.++ .+ +| .++++++++.++.|+.+-+-.
T Consensus 13 i~p~i~a~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~-~~---~~----------~~~i~~l~~~~~~~~~v~l~v- 77 (230)
T 1rpx_A 13 VSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPN-IT---IG----------PLVVDSLRPITDLPLDVHLMI- 77 (230)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSC-BC---CC----------HHHHHHHGGGCCSCEEEEEES-
T ss_pred EEEEeecCCHHHHHHHHHHHHHCCCCEEEEeeccCCcccc-cc---cC----------HHHHHHHHhccCCcEEEEEEe-
Confidence 56667788888899999999999999988853 211111 11 12 356677777666676655433
Q ss_pred CCCCccHHHHHHHHHHHhhcCCccEEEEccC--ccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHH
Q 017176 145 VDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR--KALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 222 (376)
Q Consensus 145 ~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r--~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da 222 (376)
.+ .++.+ ..+ .++|+|.|++|+. ... ...+.+..+.+ . ++.++..=.-.+..+.
T Consensus 78 -nd---~~~~v---~~~-~~~Gad~v~vh~~~~~~~--------------~~~~~~~~~~~-~-g~~ig~~~~p~t~~e~ 133 (230)
T 1rpx_A 78 -VE---PDQRV---PDF-IKAGADIVSVHCEQSSTI--------------HLHRTINQIKS-L-GAKAGVVLNPGTPLTA 133 (230)
T ss_dssp -SS---HHHHH---HHH-HHTTCSEEEEECSTTTCS--------------CHHHHHHHHHH-T-TSEEEEEECTTCCGGG
T ss_pred -cC---HHHHH---HHH-HHcCCCEEEEEecCccch--------------hHHHHHHHHHH-c-CCcEEEEeCCCCCHHH
Confidence 22 22222 222 3699999999975 310 01234444433 2 5555443222344333
Q ss_pred HHHHHcCcCeeE
Q 017176 223 NAALRKGAHHVM 234 (376)
Q Consensus 223 ~~~l~~Gad~Vm 234 (376)
.+.+..++|.|.
T Consensus 134 ~~~~~~~~d~vl 145 (230)
T 1rpx_A 134 IEYVLDAVDLVL 145 (230)
T ss_dssp GTTTTTTCSEEE
T ss_pred HHHHHhhCCEEE
Confidence 333346799884
No 350
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=92.39 E-value=2.3 Score=38.82 Aligned_cols=97 Identities=8% Similarity=0.038 Sum_probs=59.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQL 154 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~ 154 (376)
+++...+-|+...+.|+|.||||+|.+. ....+.+.+++..+++.+++|++|-.. .. ++
T Consensus 23 ~~~~a~~~a~~~v~~GAdiIDIg~g~~~-------------v~~~ee~~rvv~~i~~~~~~pisIDT~-------~~-~v 81 (262)
T 1f6y_A 23 DPAPVQEWARRQEEGGARALDLNVGPAV-------------QDKVSAMEWLVEVTQEVSNLTLCLDST-------NI-KA 81 (262)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEBCC-----------------CHHHHHHHHHHHHHTTCCSEEEEECS-------CH-HH
T ss_pred CHHHHHHHHHHHHHCCCcEEEECCCCCC-------------CChHHHHHHHHHHHHHhCCCeEEEeCC-------CH-HH
Confidence 4566666677777789999999985432 234677888888888877899988422 11 22
Q ss_pred HHHHHHHhhc-CCccEEE-EccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE
Q 017176 155 CDFIYKVSSL-SPTRHFI-IHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL 212 (376)
Q Consensus 155 ~~~i~~~~e~-~Gvd~I~-vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~ 212 (376)
++ ..++. .|++.|. |++... .++.+..++++. +.|+|+
T Consensus 82 ~~---aAl~a~~Ga~iINdvs~~~d----------------~~~~~~~~~a~~-~~~vvl 121 (262)
T 1f6y_A 82 IE---AGLKKCKNRAMINSTNAERE----------------KVEKLFPLAVEH-GAALIG 121 (262)
T ss_dssp HH---HHHHHCSSCEEEEEECSCHH----------------HHHHHHHHHHHT-TCEEEE
T ss_pred HH---HHHhhCCCCCEEEECCCCcc----------------cHHHHHHHHHHh-CCcEEE
Confidence 22 12222 2888876 555310 133344555555 788887
No 351
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=92.37 E-value=0.45 Score=44.36 Aligned_cols=124 Identities=15% Similarity=0.099 Sum_probs=73.6
Q ss_pred HHHHHHCCCCEEE----ecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEE--e--cCC--CCCCccHH
Q 017176 83 TELANAYNYDEIN----LNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVK--C--RIG--VDDHDSYN 152 (376)
Q Consensus 83 a~~~~~~G~d~Ie----iN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vK--i--R~g--~~~~~~~~ 152 (376)
++.+.+.|+|++- ||.|.|... ...+.+.+++++.. ..++|+.+- + |.| ..+..+.
T Consensus 134 Ve~AvrlGADaV~~l~~i~~Gs~~e~------------~~l~~la~vv~ea~-~~GlP~~~ep~~y~r~gg~v~~~~dp- 199 (307)
T 3fok_A 134 VSSMVDRGVDFAKTLVRINLSDAGTA------------PTLEATAHAVNEAA-AAQLPIMLEPFMSNWVNGKVVNDLST- 199 (307)
T ss_dssp HHHHHHHTCCEEEEEEEECTTCTTHH------------HHHHHHHHHHHHHH-HTTCCEEEEEEEEEEETTEEEECCSH-
T ss_pred HHHHHHCCCCEEEEEEEECCCChhHH------------HHHHHHHHHHHHHH-HcCCcEEEEeeccccCCCCcCCCCCH-
Confidence 3445567999976 455555321 12345555665543 357887764 2 212 1121223
Q ss_pred HHHHHHHHHhhcCCcc----EEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCC--CHHHH----
Q 017176 153 QLCDFIYKVSSLSPTR----HFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGIN--TVDEV---- 222 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd----~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~--s~~da---- 222 (376)
+.+...+++..+.|+| .|-+--- +.+.++.+.. .+||+..||=. +.+++
T Consensus 200 ~~Va~aaRiAaELGADs~~tivK~~y~--------------------e~f~~Vv~a~-~vPVViaGG~k~~~~~e~L~~v 258 (307)
T 3fok_A 200 DAVIQSVAIAAGLGNDSSYTWMKLPVV--------------------EEMERVMEST-TMPTLLLGGEGGNDPDATFASW 258 (307)
T ss_dssp HHHHHHHHHHHTCSSCCSSEEEEEECC--------------------TTHHHHGGGC-SSCEEEECCSCC--CHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcCCCEEEeCCc--------------------HHHHHHHHhC-CCCEEEeCCCCCCCHHHHHHHH
Confidence 3444456777789999 7765210 1134555655 69998888765 44544
Q ss_pred HHHHH-cCcCeeEEchHHhh
Q 017176 223 NAALR-KGAHHVMVGRAAYQ 241 (376)
Q Consensus 223 ~~~l~-~Gad~VmiGRa~l~ 241 (376)
+++++ .||.||.+||-++.
T Consensus 259 ~~A~~~aGa~Gv~vGRNIfQ 278 (307)
T 3fok_A 259 EHALTLPGVRGLTVGRTLLY 278 (307)
T ss_dssp HHHTTSTTEEEEEECTTTSS
T ss_pred HHHHHhCCCeEEeechhhcc
Confidence 44556 69999999999988
No 352
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=92.36 E-value=2.5 Score=37.68 Aligned_cols=138 Identities=9% Similarity=0.102 Sum_probs=75.8
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccc---cccCCHHHHHHHHHHHhcccCccEEEE
Q 017176 64 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGV---SLMLDPKFVGEAMSVIAANTNVPVSVK 140 (376)
Q Consensus 64 ~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~---~l~~~~~~~~eiv~~v~~~~~~pv~vK 140 (376)
+-++++|.+.-....+.++.+.+.++|||+||+....|... .|.+ ....+++.+.++-+.+++ .++.++.=
T Consensus 9 ~mklg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~i~~~ 82 (262)
T 3p6l_A 9 GWRLGMQSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLGG-----KWGDKVFDFNLDAQTQKEIKELAAS-KGIKIVGT 82 (262)
T ss_dssp TEEEEEEGGGGTTSCHHHHHHHHHHTTCCEEEECTTEECCG-----GGTTCEESTTCCHHHHHHHHHHHHH-TTCEEEEE
T ss_pred CcEEEEEecccCCCCHHHHHHHHHHcCCCEEeecCCccccc-----ccccccccccCCHHHHHHHHHHHHH-cCCeEEEE
Confidence 34578887765444678888999999999999986543210 0111 111345555565555443 35544332
Q ss_pred ecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE---ec-CC
Q 017176 141 CRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL---NG-GI 216 (376)
Q Consensus 141 iR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~---nG-gI 216 (376)
....-...+.+.+.++ ++...|+..|.+|.+.. .|..+.+..++. ++.+.. .+ .+
T Consensus 83 ~~~~~~~~~~~~~~i~----~A~~lGa~~v~~~~~~~----------------~~~~l~~~a~~~-gv~l~~En~~~~~~ 141 (262)
T 3p6l_A 83 GVYVAEKSSDWEKMFK----FAKAMDLEFITCEPALS----------------DWDLVEKLSKQY-NIKISVHNHPQPSD 141 (262)
T ss_dssp EEECCSSTTHHHHHHH----HHHHTTCSEEEECCCGG----------------GHHHHHHHHHHH-TCEEEEECCSSSSS
T ss_pred eccCCccHHHHHHHHH----HHHHcCCCEEEecCCHH----------------HHHHHHHHHHHh-CCEEEEEeCCCccc
Confidence 1111111233444433 34578999999996421 155555555543 444332 12 22
Q ss_pred -CCHHHHHHHHHc
Q 017176 217 -NTVDEVNAALRK 228 (376)
Q Consensus 217 -~s~~da~~~l~~ 228 (376)
.+++++.++++.
T Consensus 142 ~~~~~~~~~ll~~ 154 (262)
T 3p6l_A 142 YWKPENLLKAISG 154 (262)
T ss_dssp SSSHHHHHHHHTT
T ss_pred cCCHHHHHHHHHh
Confidence 478888888863
No 353
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=92.34 E-value=1.8 Score=39.81 Aligned_cols=146 Identities=15% Similarity=0.109 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHCCCCEEEecCCCCC----ccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccH
Q 017176 76 LDNLAKATELANAYNYDEINLNCGCPS----PKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 76 ~~~~~~aa~~~~~~G~d~IeiN~gcP~----~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~ 151 (376)
.+.+....+.+++.|...+.==+.-.+ .....-..-|+..+.+..++.++-+ ++.||.+|.-.. .++
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~~kIgs~~~~n~~ll~~~a~-----~~kPV~lk~G~~----~t~ 158 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRYADMLQIGARNMQNFPLLREVGR-----SGKPVLLKRGFG----NTV 158 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHH-----HTCCEEEECCTT----CCH
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHhCCeEEECcccccCHHHHHHHHc-----cCCeEEEcCCCC----CCH
Confidence 566666666677777655432111000 0001112247788888888777653 478999996653 134
Q ss_pred HHHHHHHHHHhhcCCc-cEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEe----cCCCC--HHHHHH
Q 017176 152 NQLCDFIYKVSSLSPT-RHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN----GGINT--VDEVNA 224 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gv-d~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~n----GgI~s--~~da~~ 224 (376)
.++...+..+ ...|. +.+.+|-++..+.+. ....+++..+..+++.+ ++||++. +|..+ .+-+..
T Consensus 159 ~ei~~Ave~i-~~~Gn~~i~L~~Rg~~~yp~y------~~~~vdl~~i~~lk~~~-~lpVi~dssH~~g~~~~~~~~~~a 230 (276)
T 1vs1_A 159 EELLAAAEYI-LLEGNWQVVLVERGIRTFEPS------TRFTLDVAAVAVLKEAT-HLPVIVDPSHPAGRRSLVPALAKA 230 (276)
T ss_dssp HHHHHHHHHH-HHTTCCCEEEEECCBCCSCCS------SSSBCBHHHHHHHHHHB-SSCEEECCHHHHCSGGGHHHHHHH
T ss_pred HHHHHHHHHH-HHcCCCeEEEEeCCcCCCCCc------CcchhCHHHHHHHHHHh-CCCEEEeCCCCCCccchHHHHHHH
Confidence 4444433333 35787 555567233222111 11234566677776655 7898763 23333 445556
Q ss_pred HHHcCcCeeEEchH
Q 017176 225 ALRKGAHHVMVGRA 238 (376)
Q Consensus 225 ~l~~Gad~VmiGRa 238 (376)
++..||||+||=+=
T Consensus 231 Ava~Ga~Gl~IE~H 244 (276)
T 1vs1_A 231 GLAAGADGLIVEVH 244 (276)
T ss_dssp HHHTTCSEEEEEBC
T ss_pred HHHcCCCEEEEEec
Confidence 67789999998653
No 354
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=92.25 E-value=2.5 Score=38.36 Aligned_cols=127 Identities=9% Similarity=0.061 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHH
Q 017176 76 LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLC 155 (376)
Q Consensus 76 ~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~ 155 (376)
.+.+.+-++.++++|+|+|-+-+=.|. +. -|.+.+.+++++.. +.|+|.-.- +|...+..+.+
T Consensus 72 ~~~M~~Di~~~~~~GadGvV~G~Lt~d------g~------iD~~~~~~Li~~a~---~~~vTFHRA--fD~~~d~~~al 134 (256)
T 1twd_A 72 FAAILEDVRTVRELGFPGLVTGVLDVD------GN------VDMPRMEKIMAAAG---PLAVTFHRA--FDMCANPLYTL 134 (256)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCBCTT------SS------BCHHHHHHHHHHHT---TSEEEECGG--GGGCSCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeECCC------CC------cCHHHHHHHHHHhC---CCcEEEECc--hhccCCHHHHH
Confidence 345566677889999999998653222 21 46788888887764 467666322 44433443433
Q ss_pred HHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEE
Q 017176 156 DFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 235 (376)
Q Consensus 156 ~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~Vmi 235 (376)
+ .+. +.|++.|--||.... ..-..+.++++.+...+|-|+.-||| +.+.+.+++.+|++-+=.
T Consensus 135 e---~L~-~lG~~rILTSG~~~~------------a~~g~~~L~~Lv~~a~~i~Im~GgGv-~~~Ni~~l~~tGv~e~H~ 197 (256)
T 1twd_A 135 N---NLA-ELGIARVLTSGQKSD------------ALQGLSKIMELIAHRDAPIIMAGAGV-RAENLHHFLDAGVLEVHS 197 (256)
T ss_dssp H---HHH-HHTCCEEEECTTSSS------------TTTTHHHHHHHHTSSSCCEEEEESSC-CTTTHHHHHHHTCSEEEE
T ss_pred H---HHH-HcCCCEEECCCCCCC------------HHHHHHHHHHHHHhhCCcEEEecCCc-CHHHHHHHHHcCCCeEeE
Confidence 3 332 569999988876421 01126677777765436778888888 455566666788887775
Q ss_pred c
Q 017176 236 G 236 (376)
Q Consensus 236 G 236 (376)
+
T Consensus 198 S 198 (256)
T 1twd_A 198 S 198 (256)
T ss_dssp C
T ss_pred C
Confidence 5
No 355
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=92.25 E-value=3.2 Score=38.34 Aligned_cols=139 Identities=16% Similarity=0.198 Sum_probs=85.6
Q ss_pred EEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCC
Q 017176 67 IVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVD 146 (376)
Q Consensus 67 ~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~ 146 (376)
+.+.++..+.+ .+..+++.|+|-|||+.+-.. | .+--.+ .+++.+++.+++||-+=+|+--.
T Consensus 40 ~~lEvc~~s~~----~a~~A~~gGAdRIELc~~l~~---------G-GlTPS~----g~i~~a~~~~~ipV~vMIRPRgG 101 (287)
T 3iwp_A 40 FLMEVCVDSVE----SAVNAERGGADRIELCSGLSE---------G-GTTPSM----GVLQVVKQSVQIPVFVMIRPRGG 101 (287)
T ss_dssp SEEEEEESSHH----HHHHHHHHTCSEEEECBCGGG---------T-CBCCCH----HHHHHHHTTCCSCEEEECCSSSS
T ss_pred ceEEEEeCCHH----HHHHHHHhCCCEEEECCCCCC---------C-CCCCCH----HHHHHHHHhcCCCeEEEEecCCC
Confidence 56777777765 445567789999999743111 1 122222 34556666778998888877322
Q ss_pred C----CccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecC---CCCH
Q 017176 147 D----HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG---INTV 219 (376)
Q Consensus 147 ~----~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGg---I~s~ 219 (376)
+ ..+++.+.+.+. .+.++|+|.|+++.=+. .| .++.+...++++....++|...=- +.++
T Consensus 102 dF~Ys~~E~~~M~~dI~-~~~~~GAdGvVfG~L~~--dg----------~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~ 168 (287)
T 3iwp_A 102 DFLYSDREIEVMKADIR-LAKLYGADGLVFGALTE--DG----------HIDKELCMSLMAICRPLPVTFHRAFDMVHDP 168 (287)
T ss_dssp CSCCCHHHHHHHHHHHH-HHHHTTCSEEEECCBCT--TS----------CBCHHHHHHHHHHHTTSCEEECGGGGGCSCH
T ss_pred CcccCHHHHHHHHHHHH-HHHHcCCCEEEEeeeCC--CC----------CcCHHHHHHHHHHcCCCcEEEECchhccCCH
Confidence 1 134555555544 44579999999886332 11 123566666666544688887755 3457
Q ss_pred HHHHHHHH-cCcCeeEEc
Q 017176 220 DEVNAALR-KGAHHVMVG 236 (376)
Q Consensus 220 ~da~~~l~-~Gad~VmiG 236 (376)
..+.+.+. .|+|.|.-.
T Consensus 169 ~~Ale~Li~lGvdrILTS 186 (287)
T 3iwp_A 169 MAALETLLTLGFERVLTS 186 (287)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEECC
Confidence 76666665 699988773
No 356
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=92.24 E-value=0.53 Score=40.87 Aligned_cols=82 Identities=12% Similarity=-0.016 Sum_probs=53.1
Q ss_pred ccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEec
Q 017176 135 VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG 214 (376)
Q Consensus 135 ~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nG 214 (376)
.|+.+-+|. .+.++..+. ++.+.+.|++.|.+|.++.. ..+.+.++++.++.-.+|+.|
T Consensus 10 ~~~i~~~~~-----~~~~~~~~~-~~~~~~~G~~~iev~~~~~~---------------~~~~i~~ir~~~~~~~~ig~~ 68 (205)
T 1wa3_A 10 HKIVAVLRA-----NSVEEAKEK-ALAVFEGGVHLIEITFTVPD---------------ADTVIKELSFLKEKGAIIGAG 68 (205)
T ss_dssp HCEEEEECC-----SSHHHHHHH-HHHHHHTTCCEEEEETTSTT---------------HHHHHHHTHHHHHTTCEEEEE
T ss_pred CCEEEEEec-----CCHHHHHHH-HHHHHHCCCCEEEEeCCChh---------------HHHHHHHHHHHCCCCcEEEec
Confidence 466665664 123343333 44556799999999976420 033455555543322357778
Q ss_pred CCCCHHHHHHHHHcCcCeeEEchH
Q 017176 215 GINTVDEVNAALRKGAHHVMVGRA 238 (376)
Q Consensus 215 gI~s~~da~~~l~~Gad~VmiGRa 238 (376)
-+.+++++.++.+.|||+| ++-+
T Consensus 69 ~v~~~~~~~~a~~~Gad~i-v~~~ 91 (205)
T 1wa3_A 69 TVTSVEQCRKAVESGAEFI-VSPH 91 (205)
T ss_dssp SCCSHHHHHHHHHHTCSEE-ECSS
T ss_pred ccCCHHHHHHHHHcCCCEE-EcCC
Confidence 8899999999999999999 7654
No 357
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=92.19 E-value=1.2 Score=40.64 Aligned_cols=110 Identities=15% Similarity=0.103 Sum_probs=62.1
Q ss_pred cccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEE-EEccCccccCCCCCCCCCCC
Q 017176 112 GVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHF-IIHSRKALLNGISPAENRTI 190 (376)
Q Consensus 112 G~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I-~vh~r~~~~~g~~~~~~~~~ 190 (376)
|+..+.+..++.++.+ ++.||.+|.... .+++++...+.. +...|...+ .+|-+.....++ ..
T Consensus 113 ga~~~~n~~ll~~~a~-----~~kPV~lk~G~~----~t~~e~~~Av~~-i~~~Gn~~i~L~~RG~~~~~~y------~~ 176 (262)
T 1zco_A 113 GARNSQNFELLKEVGK-----VENPVLLKRGMG----NTIQELLYSAEY-IMAQGNENVILCERGIRTFETA------TR 176 (262)
T ss_dssp CGGGTTCHHHHHHHTT-----SSSCEEEECCTT----CCHHHHHHHHHH-HHTTTCCCEEEEECCBCCSCCS------SS
T ss_pred CcccccCHHHHHHHHh-----cCCcEEEecCCC----CCHHHHHHHHHH-HHHCCCCeEEEEECCCCCCCCc------Ch
Confidence 6667777776666433 689999986552 135555554443 446787444 446431111111 11
Q ss_pred CcccHHHHHHHHhhCCCCeEEEe----cCCCC--HHHHHHHHHcCcCeeEEchH
Q 017176 191 PPLKYEYYYALLRDFPDLTFTLN----GGINT--VDEVNAALRKGAHHVMVGRA 238 (376)
Q Consensus 191 ~~~~~~~v~~~~~~~~~ipVi~n----GgI~s--~~da~~~l~~Gad~VmiGRa 238 (376)
..+++..+..+++.+ ++|||+. +|..+ +.-+..+...||||+||=+=
T Consensus 177 ~~v~L~ai~~lk~~~-~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H 229 (262)
T 1zco_A 177 FTLDISAVPVVKELS-HLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVH 229 (262)
T ss_dssp SBCCTTHHHHHHHHB-SSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBC
T ss_pred hhcCHHHHHHHHhhh-CCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEec
Confidence 223455666666654 7898764 23322 13345566689999998654
No 358
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=92.16 E-value=0.43 Score=44.47 Aligned_cols=91 Identities=11% Similarity=0.140 Sum_probs=57.1
Q ss_pred HHHHHHhccc-CccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHH
Q 017176 124 EAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALL 202 (376)
Q Consensus 124 eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~ 202 (376)
+-++.+|+.. ..|+.|-+ ++++++.+. + ++|+|.|-+..-+ .+.+++.+
T Consensus 196 ~Av~~ar~~~p~~kIeVEv-------~tl~e~~eA----l-~aGaDiImLDn~s------------------~~~l~~av 245 (300)
T 3l0g_A 196 LAIQRLRKNLKNEYIAIEC-------DNISQVEES----L-SNNVDMILLDNMS------------------ISEIKKAV 245 (300)
T ss_dssp HHHHHHHHHSSSCCEEEEE-------SSHHHHHHH----H-HTTCSEEEEESCC------------------HHHHHHHH
T ss_pred HHHHHHHHhCCCCCEEEEE-------CCHHHHHHH----H-HcCCCEEEECCCC------------------HHHHHHHH
Confidence 4455555443 34555532 345554432 2 4899999886532 22333333
Q ss_pred hhC-CCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCch
Q 017176 203 RDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 203 ~~~-~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
+.. .++.+.++||| +.+.+.+..++|+|.+.+|.--..-|++
T Consensus 246 ~~~~~~v~leaSGGI-t~~~i~~~A~tGVD~IsvGalthsa~~l 288 (300)
T 3l0g_A 246 DIVNGKSVLEVSGCV-NIRNVRNIALTGVDYISIGCITNSFQNK 288 (300)
T ss_dssp HHHTTSSEEEEESSC-CTTTHHHHHTTTCSEEECGGGTSSCCCC
T ss_pred HhhcCceEEEEECCC-CHHHHHHHHHcCCCEEEeCccccCCCcc
Confidence 221 37899999999 8889988888999999999554444554
No 359
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=92.13 E-value=0.58 Score=42.68 Aligned_cols=101 Identities=11% Similarity=0.060 Sum_probs=63.4
Q ss_pred cCCCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecC-CCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEE
Q 017176 60 FSPEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNC-GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVS 138 (376)
Q Consensus 60 ~~~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~-gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~ 138 (376)
.+..+.|++ =+...|. -.|+.++++|||.|=+.. +.-. .. | |-....-..+.+...+++|.+.++.||+
T Consensus 15 l~~~~~~i~-~~~ayD~----~sA~~~~~aG~dai~vg~~s~a~--~~--G-~pD~~~vt~~em~~~~~~I~r~~~~pvi 84 (255)
T 2qiw_A 15 DHESGKLLV-LPTVWDT----WSAGLVEEAGFSGLTIGSHPVAD--AT--G-SSDGENMNFADYMAVVKKITSAVSIPVS 84 (255)
T ss_dssp HHHTCCCEE-CCEESSH----HHHHHHHHTTCSCEEECHHHHHH--HT--T-CCTTTCSCHHHHHHHHHHHHHHCSSCEE
T ss_pred HHhCCCcEE-EecCcCH----HHHHHHHHcCCCEEEEChHHHHH--hC--C-CCCCCCcCHHHHHHHHHHHHhcCCCCEE
Confidence 333455543 2334453 367788899999997752 1111 11 1 1222234567788888888888889999
Q ss_pred EEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCc
Q 017176 139 VKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK 176 (376)
Q Consensus 139 vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~ 176 (376)
+-+-.|+.+.. .+.+.++. ++|++.|.+-+..
T Consensus 85 aD~~~Gyg~~~-----~~~~~~l~-~aGa~gv~iEd~~ 116 (255)
T 2qiw_A 85 VDVESGYGLSP-----ADLIAQIL-EAGAVGINVEDVV 116 (255)
T ss_dssp EECTTCTTCCH-----HHHHHHHH-HTTCCEEEECSEE
T ss_pred eccCCCcCcHH-----HHHHHHHH-HcCCcEEEECCCC
Confidence 99999975432 22333444 5999999998764
No 360
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=92.12 E-value=0.35 Score=46.31 Aligned_cols=59 Identities=20% Similarity=0.320 Sum_probs=45.0
Q ss_pred CCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEc
Q 017176 165 SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 236 (376)
Q Consensus 165 ~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiG 236 (376)
.|++.+.+|... |. +...++.+.++++..+++||+ .|+|.|.+++..+.+.|||+|.++
T Consensus 131 ~g~~~i~i~~~~----g~--------~~~~~~~i~~lr~~~~~~~vi-~g~v~t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 131 PQVKYICLDVAN----GY--------SEHFVEFVKDVRKRFPQHTIM-AGNVVTGEMVEELILSGADIIKVG 189 (351)
T ss_dssp TTCCEEEEECSC----TT--------BHHHHHHHHHHHHHCTTSEEE-EEEECSHHHHHHHHHTTCSEEEEC
T ss_pred CCCCEEEEEecC----CC--------cHHHHHHHHHHHHhcCCCeEE-EEeCCCHHHHHHHHHhCCCEEEEC
Confidence 389999887521 11 112367788888877689988 478999999999999999999885
No 361
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=92.10 E-value=1.9 Score=42.49 Aligned_cols=121 Identities=12% Similarity=0.097 Sum_probs=82.3
Q ss_pred CCHHHHHHHHHHHHH-CCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccH
Q 017176 74 SNLDNLAKATELANA-YNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~-~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~ 151 (376)
.+|+++++.|+.+.+ .||..+-+..|.. +++.-.+.+++||+.+ +.++.|-..-+|+ .
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~----------------~~~~Di~~v~avRea~~~~~L~vDaN~~w~----~ 249 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVF----------------PPADEVAAIKALHKAFPGVPLRLDPNAAWT----V 249 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSS----------------CHHHHHHHHHHHHHHSTTCCEEEECTTCBC----H
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCC----------------CHHHHHHHHHHHHHhCCCCcEeeeCCCCCC----H
Confidence 578999988887765 5999998864321 3444566788888776 4556665555554 3
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCc
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGA 230 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Ga 230 (376)
++.+++ .+.+++. +.+|. .+ . .+++..+++.+.. ++||.+.-.+.+..++.++++ ..+
T Consensus 250 ~~Ai~~-~~~L~~~-l~~iE----eP------------~--~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~ 308 (445)
T 3va8_A 250 ETSKWV-AKELEGI-VEYLE----DP------------A--GEIEGMAAVAKEA-SMPLATNMAVVAFDHLPPSILQDAV 308 (445)
T ss_dssp HHHHHH-HHHTTTT-CSEEE----SC------------B--SHHHHHHHHHTTC-SSCEEESSSCCSGGGHHHHHHTTCC
T ss_pred HHHHHH-HHHHhhh-cCeEe----ec------------C--cCHHHHHHHHHcC-CCCEEeCCccCCHHHHHHHHHcCCC
Confidence 455554 3445666 66654 00 1 1366677777654 899999889999999999998 558
Q ss_pred CeeEE
Q 017176 231 HHVMV 235 (376)
Q Consensus 231 d~Vmi 235 (376)
|.|++
T Consensus 309 div~~ 313 (445)
T 3va8_A 309 QVILS 313 (445)
T ss_dssp SEEEE
T ss_pred CEEEe
Confidence 88876
No 362
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=92.05 E-value=0.63 Score=41.37 Aligned_cols=132 Identities=13% Similarity=0.051 Sum_probs=86.3
Q ss_pred CCCCCEEEEecCCC----HH--HHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCc
Q 017176 62 PEQHPIVLQIGGSN----LD--NLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNV 135 (376)
Q Consensus 62 ~~~~p~~vQL~g~~----~~--~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~ 135 (376)
+.+-++++|..... ++ .+.+.++.+.++|+++|.++ + + +.++.+++.+++
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~~~G~~~i~~~--------------~------~----~~i~~i~~~~~~ 70 (234)
T 1yxy_A 15 KGGIIVSCQALPGEPLYSETGGIMPLMAKAAQEAGAVGIRAN--------------S------V----RDIKEIQAITDL 70 (234)
T ss_dssp TTSCEEECCCCTTSTTCCTTCCSHHHHHHHHHHHTCSEEEEE--------------S------H----HHHHHHHTTCCS
T ss_pred hCCEEEEeeCCCCCCCcCCccchHHHHHHHHHHCCCcEeecC--------------C------H----HHHHHHHHhCCC
Confidence 45666778877654 67 78888898999999999875 1 2 347778888889
Q ss_pred cEEEEecCCCCCC-----ccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeE
Q 017176 136 PVSVKCRIGVDDH-----DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTF 210 (376)
Q Consensus 136 pv~vKiR~g~~~~-----~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipV 210 (376)
|+.--++.++++. ...++ + . .+.++|+|.|++|....... ++ ....+.+..+++.+++++|
T Consensus 71 p~i~~~~~~~~~~~~~i~~~~~~-i---~-~~~~~Gad~V~l~~~~~~~~-----~~----~~~~~~i~~i~~~~~~~~v 136 (234)
T 1yxy_A 71 PIIGIIKKDYPPQEPFITATMTE-V---D-QLAALNIAVIAMDCTKRDRH-----DG----LDIASFIRQVKEKYPNQLL 136 (234)
T ss_dssp CEEEECBCCCTTSCCCBSCSHHH-H---H-HHHTTTCSEEEEECCSSCCT-----TC----CCHHHHHHHHHHHCTTCEE
T ss_pred CEEeeEcCCCCccccccCChHHH-H---H-HHHHcCCCEEEEcccccCCC-----CC----ccHHHHHHHHHHhCCCCeE
Confidence 9832233332221 12222 2 2 23469999999997542100 00 0114567777766667776
Q ss_pred EEecCCCCHHHHHHHHHcCcCee
Q 017176 211 TLNGGINTVDEVNAALRKGAHHV 233 (376)
Q Consensus 211 i~nGgI~s~~da~~~l~~Gad~V 233 (376)
+. ++.+.+++..+.+.|+|.|
T Consensus 137 ~~--~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 137 MA--DISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp EE--ECSSHHHHHHHHHTTCSEE
T ss_pred EE--eCCCHHHHHHHHHcCCCEE
Confidence 65 6889999999999999998
No 363
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=91.81 E-value=0.49 Score=42.37 Aligned_cols=131 Identities=17% Similarity=0.125 Sum_probs=75.6
Q ss_pred HHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHh
Q 017176 83 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVS 162 (376)
Q Consensus 83 a~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~ 162 (376)
+..++++|+|+|-|+.+. |+-.+| .+.+.++...+ .+.-+.|=+ .+ ..+.. .+
T Consensus 78 ~~~l~~~Ga~~Vllghse------RR~~~~--------e~~~k~~~A~~-~GL~~ivcV----ge---~~e~~-----~~ 130 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSE------APLKLN--------DLARLVAKAKS-LGLDVVVCA----PD---PRTSL-----AA 130 (226)
T ss_dssp HHHHHHHTCCEEEECCTT------SCCBHH--------HHHHHHHHHHH-TTCEEEEEE----SS---HHHHH-----HH
T ss_pred HHHHHHcCCCEEEEeeee------ccCCHH--------HHHHHHHHHHH-CCCEEEEEe----CC---HHHHH-----HH
Confidence 456788899999997532 122223 24444444333 233332311 11 12221 12
Q ss_pred hcCCccEEEEccCccccCCCC--CCCCCCCCcccHHHHHHHHhhC-CCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHH
Q 017176 163 SLSPTRHFIIHSRKALLNGIS--PAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAA 239 (376)
Q Consensus 163 e~~Gvd~I~vh~r~~~~~g~~--~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~ 239 (376)
...+.+.|-+-++...=.|.+ .. .+-..+.+.++++.. .+++|+.-|+|.+.+++..+...|+||+.||+++
T Consensus 131 ~~~~~~iIayep~waiGtG~~v~t~-----~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~ 205 (226)
T 1w0m_A 131 AALGPHAVAVEPPELIGTGRAVSRY-----KPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVLLASAA 205 (226)
T ss_dssp HHTCCSEEEECCGGGTTTSCCHHHH-----CHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred hcCCCCEEEEcChhhhccCCCCCCC-----ChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHH
Confidence 345777788877754212200 00 010022223333433 3689999999999999999988999999999999
Q ss_pred hhCCch
Q 017176 240 YQNPWY 245 (376)
Q Consensus 240 l~~P~l 245 (376)
+.-+++
T Consensus 206 l~a~~~ 211 (226)
T 1w0m_A 206 VKAKDP 211 (226)
T ss_dssp HTCSSH
T ss_pred HCCcCH
Confidence 988773
No 364
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=91.77 E-value=3.3 Score=38.27 Aligned_cols=126 Identities=12% Similarity=0.040 Sum_probs=76.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 152 (376)
|.+.+.+-++.+.+.|.|+|-++.. +|+ +..| ..+.-.++++.+.+.+ .+||.+-+.. .+..
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~Gt--------tGE-~~~L--s~~Er~~v~~~~~~~~~gr~pviaGvg~-----~~t~ 82 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVPCGT--------TGE-SPTL--SKSEHEQVVEITIKTANGRVPVIAGAGS-----NSTA 82 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEETTSG--------GGT-GGGS--CHHHHHHHHHHHHHHHTTSSCBEEECCC-----SSHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc--------ccC-hhhC--CHHHHHHHHHHHHHHhCCCCcEEEecCC-----ccHH
Confidence 6788888999888999999977531 344 3333 4444555666555543 4788775432 2345
Q ss_pred HHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE------ecCCCCHHHHHHHH
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL------NGGINTVDEVNAAL 226 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~------nGgI~s~~da~~~l 226 (376)
+.++. ++.+++.|+|++.+..-. +...+ ...-++++.++.+.. ++||+. .|--.+++.+.++.
T Consensus 83 ~ai~l-a~~A~~~Gadavlv~~P~--y~~~s-------~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~~~~~~~La 151 (292)
T 2vc6_A 83 EAIAF-VRHAQNAGADGVLIVSPY--YNKPT-------QEGIYQHFKAIDAAS-TIPIIVYNIPGRSAIEIHVETLARIF 151 (292)
T ss_dssp HHHHH-HHHHHHTTCSEEEEECCC--SSCCC-------HHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHH-HHHHHHcCCCEEEEcCCC--CCCCC-------HHHHHHHHHHHHHhC-CCCEEEEeCccccCcCCCHHHHHHHH
Confidence 55554 455678999999876421 11110 011145566676664 799876 35446788777765
Q ss_pred H
Q 017176 227 R 227 (376)
Q Consensus 227 ~ 227 (376)
+
T Consensus 152 ~ 152 (292)
T 2vc6_A 152 E 152 (292)
T ss_dssp H
T ss_pred h
Confidence 4
No 365
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=91.76 E-value=0.89 Score=42.91 Aligned_cols=92 Identities=13% Similarity=0.126 Sum_probs=63.2
Q ss_pred CHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHH
Q 017176 118 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 197 (376)
Q Consensus 118 ~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~ 197 (376)
.++.+.+.++.+++.++.|+.|.+-.. + .++.+.++ ++.+.|+|.|.+|++.. .+.
T Consensus 47 ~~~~~~~~i~~i~~~~~~p~gvnl~~~-~--~~~~~~~~----~a~~~g~d~V~~~~g~p-----------------~~~ 102 (332)
T 2z6i_A 47 PKEVVKANIDKIKSLTDKPFGVNIMLL-S--PFVEDIVD----LVIEEGVKVVTTGAGNP-----------------SKY 102 (332)
T ss_dssp CHHHHHHHHHHHHHHCCSCEEEEECTT-S--TTHHHHHH----HHHHTTCSEEEECSSCG-----------------GGT
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEecCC-C--CCHHHHHH----HHHHCCCCEEEECCCCh-----------------HHH
Confidence 567788888888877778888766542 1 22444333 33468999999998531 122
Q ss_pred HHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEE-ch
Q 017176 198 YYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV-GR 237 (376)
Q Consensus 198 v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~Vmi-GR 237 (376)
+..+.+ . ++||+. .|.+.+++..+.+.|+|+|.+ |+
T Consensus 103 i~~l~~-~-g~~v~~--~v~~~~~a~~~~~~GaD~i~v~g~ 139 (332)
T 2z6i_A 103 MERFHE-A-GIIVIP--VVPSVALAKRMEKIGADAVIAEGM 139 (332)
T ss_dssp HHHHHH-T-TCEEEE--EESSHHHHHHHHHTTCSCEEEECT
T ss_pred HHHHHH-c-CCeEEE--EeCCHHHHHHHHHcCCCEEEEECC
Confidence 334433 3 788884 478999998888899999998 54
No 366
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=91.60 E-value=4.9 Score=38.23 Aligned_cols=99 Identities=11% Similarity=0.125 Sum_probs=58.9
Q ss_pred cccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCC
Q 017176 112 GVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIP 191 (376)
Q Consensus 112 G~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~ 191 (376)
||.-+++..++.++- .+++||.+|.-+. +++|+...+ ..+.+.|.+.+.+|+-+. | ..+ ..
T Consensus 118 ~S~~~~N~pLL~~va-----~~gKPviLstGms-----tl~Ei~~Av-e~i~~~g~~viLlhC~s~-Y--Pt~-----~~ 178 (350)
T 3g8r_A 118 ASCSFTDWPLLERIA-----RSDKPVVASTAGA-----RREDIDKVV-SFMLHRGKDLTIMHCVAE-Y--PTP-----DD 178 (350)
T ss_dssp CSSSTTCHHHHHHHH-----TSCSCEEEECTTC-----CHHHHHHHH-HHHHTTTCCEEEEECCCC-S--SCC-----GG
T ss_pred CcccccCHHHHHHHH-----hhCCcEEEECCCC-----CHHHHHHHH-HHHHHcCCCEEEEecCCC-C--CCC-----cc
Confidence 444456777666543 2589999986652 344544333 233456878777787532 1 111 12
Q ss_pred cccHHHHHHHHhhCCCCeEEEe----cCCCCHHHHHHHHHcCcC
Q 017176 192 PLKYEYYYALLRDFPDLTFTLN----GGINTVDEVNAALRKGAH 231 (376)
Q Consensus 192 ~~~~~~v~~~~~~~~~ipVi~n----GgI~s~~da~~~l~~Gad 231 (376)
.+++..+..+++.++++||..+ |+.. .-+..++..||+
T Consensus 179 ~~nL~aI~~Lk~~fp~lpVG~SdHt~g~~~--~~~~AAvAlGA~ 220 (350)
T 3g8r_A 179 HLHLARIKTLRQQYAGVRIGYSTHEDPDLM--EPIMLAVAQGAT 220 (350)
T ss_dssp GCCTTHHHHHHHHCTTSEEEEEECCCSSCC--HHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHHCCCCCEEcCCCCCCCcc--HHHHHHHHcCCC
Confidence 3456677788888878999766 3321 233466678886
No 367
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=91.59 E-value=0.26 Score=47.96 Aligned_cols=61 Identities=21% Similarity=0.296 Sum_probs=46.1
Q ss_pred hcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEc
Q 017176 163 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 236 (376)
Q Consensus 163 e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiG 236 (376)
.++|+|.|.++... |. +...++.+..+++.++++||++ |++.+.+++..+.+.|+|+|.+|
T Consensus 162 ~~~G~d~i~i~~~~----g~--------~~~~~e~i~~ir~~~~~~pviv-~~v~~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 162 VKAHVDILVIDSAH----GH--------STRIIELIKKIKTKYPNLDLIA-GNIVTKEAALDLISVGADCLKVG 222 (404)
T ss_dssp HHTTCSEEEECCSC----CS--------SHHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHTTTCSEEEEC
T ss_pred HHCCCCEEEEeCCC----CC--------hHHHHHHHHHHHHHCCCCeEEE-cCCCcHHHHHHHHhcCCCEEEEC
Confidence 46899999986321 11 1223667777777766899987 77899999999999999999994
No 368
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=91.56 E-value=2.6 Score=41.46 Aligned_cols=121 Identities=12% Similarity=0.126 Sum_probs=82.8
Q ss_pred CCHHHHHHHHHHHHH-CCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccH
Q 017176 74 SNLDNLAKATELANA-YNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~-~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~ 151 (376)
.+|+++++.|+.+.+ .||..+-+..|. .+++.-.+.+++||+.+ ++++.|-..-+|+ .
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~----------------~~~~~Di~~v~avRea~~d~~L~vDaN~~w~----~ 251 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKGGV----------------FAPEEEMAAVEALRAAFPDHPLRLDPNAAWT----P 251 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSS----------------SCHHHHHHHHHHHHHHCTTSCEEEECTTCSC----H
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCC----------------CCHHHHHHHHHHHHHhCCCCcEEEECCCCCC----H
Confidence 578999988887765 599999886432 13444566778888776 4566666555564 3
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCc
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGA 230 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Ga 230 (376)
++.+++ .+.+++. +.+|. .+ .+ +++..+++.+.. ++||.+.-.+.+..++.++++ ..+
T Consensus 252 ~~Ai~~-~~~L~~~-l~~iE----eP------------~~--~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~a~ 310 (445)
T 3vdg_A 252 QTSVKV-AAGLEGV-LEYLE----DP------------TP--GLDGMAEVAAQA-PMPLATNMCVVAFDQLPAAVAKNSV 310 (445)
T ss_dssp HHHHHH-HHHTTTT-CSEEE----CC------------SS--SHHHHHHHHHHC-SSCEEESSSCCSGGGHHHHHHHTCC
T ss_pred HHHHHH-HHHHhhH-HHeee----CC------------CC--CHHHHHHHHhcC-CCCEEcCCcCCCHHHHHHHHHcCCC
Confidence 455554 3455666 66654 00 11 366677777764 899999888999999999998 568
Q ss_pred CeeEE
Q 017176 231 HHVMV 235 (376)
Q Consensus 231 d~Vmi 235 (376)
|.|++
T Consensus 311 div~~ 315 (445)
T 3vdg_A 311 QVVLS 315 (445)
T ss_dssp SEEEE
T ss_pred CEEee
Confidence 88876
No 369
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=91.56 E-value=1.5 Score=41.97 Aligned_cols=143 Identities=8% Similarity=-0.016 Sum_probs=73.0
Q ss_pred HHHHHHHHHCCCCEEEecC-------CCCCccccCCCCccccccCC-------HHHHHHHHHHHhcccCccEEEEecCCC
Q 017176 80 AKATELANAYNYDEINLNC-------GCPSPKVAGHGCFGVSLMLD-------PKFVGEAMSVIAANTNVPVSVKCRIGV 145 (376)
Q Consensus 80 ~~aa~~~~~~G~d~IeiN~-------gcP~~~v~r~g~yG~~l~~~-------~~~~~eiv~~v~~~~~~pv~vKiR~g~ 145 (376)
.+..+.+.+.||-+|++-. |.|.+...+.. .+++|+ .+...+-++..++..+.|+.+-+- |
T Consensus 61 ~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~---~~~iN~~G~~n~G~~~~~~~l~~~~~~~~~pvivsI~-G- 135 (354)
T 4ef8_A 61 TEELVAMTESASGSLVSKSCTPALREGNPTPRYQALP---LGSINSMGLPNNGFDFYLAYAAEQHDYGKKPLFLSMS-G- 135 (354)
T ss_dssp HHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEET---TEEEECCCCCBCCHHHHHHHHHHTCCTTTCCEEEEEC-C-
T ss_pred HHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecc---hhhhccCCCCCcCHHHHHHHHHHHhhcCCCcEEEEec-c-
Confidence 3456677788999999853 44444333322 222332 345555555544445788887653 2
Q ss_pred CCCccHHHHHHHHHHHhh---cCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEe--cCCCCHH
Q 017176 146 DDHDSYNQLCDFIYKVSS---LSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN--GGINTVD 220 (376)
Q Consensus 146 ~~~~~~~~~~~~i~~~~e---~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~n--GgI~s~~ 220 (376)
. +.++.++.+. .++ +.|+|+|.|.-..+...|.. ..-.-+....+.+..+++. .++||+.= =++ +.+
T Consensus 136 ~---~~~d~~~~a~-~l~~~~~~g~d~ielNisCPn~~gg~--~l~~~~e~~~~il~av~~~-~~~PV~vKi~p~~-d~~ 207 (354)
T 4ef8_A 136 L---SMRENVEMCK-RLAAVATEKGVILELNLSCPNVPGKP--QVAYDFDAMRQCLTAVSEV-YPHSFGVKMPPYF-DFA 207 (354)
T ss_dssp S---SHHHHHHHHH-HHHHHHHHHCCEEEEECSSCCSTTSC--CGGGSHHHHHHHHHHHHHH-CCSCEEEEECCCC-SHH
T ss_pred C---CHHHHHHHHH-HHhhhhhcCCCEEEEeCCCCCCCCch--hhccCHHHHHHHHHHHHHh-hCCCeEEEecCCC-CHH
Confidence 2 2334444333 233 57899999975533222211 1000011123455555554 47898753 233 444
Q ss_pred HHH---HHHH-cC-cCeeEE
Q 017176 221 EVN---AALR-KG-AHHVMV 235 (376)
Q Consensus 221 da~---~~l~-~G-ad~Vmi 235 (376)
++. +++. .| +|+|.+
T Consensus 208 ~~~~~a~~~~~~Gg~d~I~~ 227 (354)
T 4ef8_A 208 HFDAAAEILNEFPKVQFITC 227 (354)
T ss_dssp HHHHHHHHHHTCTTEEEEEE
T ss_pred HHHHHHHHHHhCCCccEEEE
Confidence 443 3333 66 999975
No 370
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=91.55 E-value=8.3 Score=35.48 Aligned_cols=153 Identities=15% Similarity=0.115 Sum_probs=92.9
Q ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 62 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 62 ~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
....|+++...+++.++-.+.++.++++|+|++-+- .|.-. + ...+-+.+-.++|.+++++|+.+--
T Consensus 71 ~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~--~P~y~--~---------~~~~~l~~~f~~va~a~~lPiilYn 137 (293)
T 1f6k_A 71 KDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAV--TPFYY--K---------FSFPEIKHYYDTIIAETGSNMIVYS 137 (293)
T ss_dssp TTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEE--CCCSS--C---------CCHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC--CCCCC--C---------CCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 456799999999999999999999999999999885 45421 1 1246677777888777888988754
Q ss_pred ---cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCC
Q 017176 142 ---RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINT 218 (376)
Q Consensus 142 ---R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s 218 (376)
|.|.+- +.+.+ .++++.-.+-.|--..+ +...+.++++..++.. +.+|+=
T Consensus 138 ~P~~tg~~l--~~~~~----~~La~~pnIvgiK~s~g------------------d~~~~~~~~~~~~~f~-v~~G~d-- 190 (293)
T 1f6k_A 138 IPFLTGVNM--GIEQF----GELYKNPKVLGVKFTAG------------------DFYLLERLKKAYPNHL-IWAGFD-- 190 (293)
T ss_dssp CHHHHCCCC--CHHHH----HHHHTSTTEEEEEECSC------------------CHHHHHHHHHHCTTSE-EEECCG--
T ss_pred CccccCcCC--CHHHH----HHHhcCCCEEEEEECCC------------------CHHHHHHHHHhCCCeE-EEECcH--
Confidence 334332 22222 23333222333332221 1344455554444544 445542
Q ss_pred HHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhC
Q 017176 219 VDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYG 256 (376)
Q Consensus 219 ~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g 256 (376)
+.+...+..|++|++.+.+-+ -|..+.+.++....|
T Consensus 191 -~~~~~~l~~G~~G~is~~~n~-~P~~~~~l~~a~~~G 226 (293)
T 1f6k_A 191 -EMMLPAASLGVDGAIGSTFNV-NGVRARQIFELTKAG 226 (293)
T ss_dssp -GGHHHHHHTTCSEEEESTHHH-HHHHHHHHHHHHHTT
T ss_pred -HHHHHHHHCCCcEEEeCHHHh-hHHHHHHHHHHHHCC
Confidence 235566678999999988764 466554444443345
No 371
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=91.54 E-value=0.81 Score=42.86 Aligned_cols=88 Identities=7% Similarity=0.012 Sum_probs=55.2
Q ss_pred HHHHHHHHCCCCEEEecCCCCCccc-cCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHHHHHHH
Q 017176 81 KATELANAYNYDEINLNCGCPSPKV-AGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDF 157 (376)
Q Consensus 81 ~aa~~~~~~G~d~IeiN~gcP~~~v-~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~~~~~~ 157 (376)
-.|++++++|||.|=+...+-.... ...|. | .-..+.+...++.|.+.+ +.||++-+-.|+.+. +.+.+.
T Consensus 36 ~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~-~---~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~~---~~v~~~ 108 (307)
T 3lye_A 36 LSARTAMELGFKSLYMTGAGTTASRLGQPDL-A---IAQLHDMRDNADMIANLDPFGPPLIADMDTGYGGP---IMVART 108 (307)
T ss_dssp HHHHHHHHTTCSCEEECHHHHHHHHHCCCSS-S---CSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSSSH---HHHHHH
T ss_pred HHHHHHHHcCCCEEEeccHHHHHHhcCCCCC-C---CCCHHHHHHHHHhhhccCCCCCcEEEECCCCCCCH---HHHHHH
Confidence 4678889999999977421110000 01111 1 234566777788887765 499999999997543 233333
Q ss_pred HHHHhhcCCccEEEEccCc
Q 017176 158 IYKVSSLSPTRHFIIHSRK 176 (376)
Q Consensus 158 i~~~~e~~Gvd~I~vh~r~ 176 (376)
+. .++++|++.|++-+..
T Consensus 109 v~-~l~~aGaagv~iEDq~ 126 (307)
T 3lye_A 109 VE-HYIRSGVAGAHLEDQI 126 (307)
T ss_dssp HH-HHHHTTCCEEEECCBC
T ss_pred HH-HHHHcCCeEEEEcCCC
Confidence 33 3456999999998765
No 372
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=91.41 E-value=1.3 Score=42.31 Aligned_cols=146 Identities=15% Similarity=0.148 Sum_probs=82.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCc-----------------------------------------cccCCCCccc
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSP-----------------------------------------KVAGHGCFGV 113 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~-----------------------------------------~v~r~g~yG~ 113 (376)
+.+...+.|+.++++|+|.+-...-.|.. ....-..-|+
T Consensus 118 s~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~vd~lkIgA 197 (350)
T 1vr6_A 118 GREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYGMYVVTEALGEDDLPKVAEYADIIQIGA 197 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHHCSEEEECG
T ss_pred CHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHhCCEEEECc
Confidence 57778888888889998887654322211 0011122366
Q ss_pred cccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEE--ccCccccCCCCCCCCCCCC
Q 017176 114 SLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII--HSRKALLNGISPAENRTIP 191 (376)
Q Consensus 114 ~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~v--h~r~~~~~g~~~~~~~~~~ 191 (376)
..+.+.+++.++- .++.||.+|.-.. .+++++...+..+ ...|...+++ ||.+. +.+. ...
T Consensus 198 r~~~n~~LL~~va-----~~~kPVilk~G~~----~tl~ei~~Ave~i-~~~GN~~viLceRG~~t-yp~~------~~~ 260 (350)
T 1vr6_A 198 RNAQNFRLLSKAG-----SYNKPVLLKRGFM----NTIEEFLLSAEYI-ANSGNTKIILCERGIRT-FEKA------TRN 260 (350)
T ss_dssp GGTTCHHHHHHHH-----TTCSCEEEECCTT----CCHHHHHHHHHHH-HHTTCCCEEEEECCBCC-SCCS------SSS
T ss_pred ccccCHHHHHHHH-----ccCCcEEEcCCCC----CCHHHHHHHHHHH-HHCCCCeEEEEeCCCCC-CCCc------Chh
Confidence 6666666655543 3589999996653 1344544433333 3578755554 34321 1111 112
Q ss_pred cccHHHHHHHHhhCCCCeEEEe----cCCCC--HHHHHHHHHcCcCeeEEchH
Q 017176 192 PLKYEYYYALLRDFPDLTFTLN----GGINT--VDEVNAALRKGAHHVMVGRA 238 (376)
Q Consensus 192 ~~~~~~v~~~~~~~~~ipVi~n----GgI~s--~~da~~~l~~Gad~VmiGRa 238 (376)
.+++..+..+++.+ ++||++. +|-.+ .+-+..++..||||+||=+=
T Consensus 261 ~vdl~ai~~lk~~~-~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H 312 (350)
T 1vr6_A 261 TLDISAVPIIRKES-HLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVH 312 (350)
T ss_dssp BCCTTHHHHHHHHB-SSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBC
T ss_pred hhhHHHHHHHHHhh-CCCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEec
Confidence 34455666666654 7999772 23332 44455666789999998653
No 373
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=91.36 E-value=4.9 Score=37.30 Aligned_cols=126 Identities=15% Similarity=0.068 Sum_probs=76.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 152 (376)
|.+.+.+-++.+.+.|.|+|-++.. +|+ +..| ..+.-.++++.+.+.+ .+||.+-+.. .++.
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~Gt--------TGE-~~~L--s~eEr~~v~~~~~~~~~grvpViaGvg~-----~~t~ 94 (301)
T 1xky_A 31 DFAKTTKLVNYLIDNGTTAIVVGGT--------TGE-SPTL--TSEEKVALYRHVVSVVDKRVPVIAGTGS-----NNTH 94 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESST--------TTT-GGGS--CHHHHHHHHHHHHHHHTTSSCEEEECCC-----SCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc--------ccC-hhhC--CHHHHHHHHHHHHHHhCCCceEEeCCCC-----CCHH
Confidence 6788999999999999999988642 344 3333 3444455555555443 4788775432 2345
Q ss_pred HHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE-e-----cCCCCHHHHHHHH
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL-N-----GGINTVDEVNAAL 226 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~-n-----GgI~s~~da~~~l 226 (376)
+.++. ++.+++.|+|++-+-.-. |...+ ...-++++.++.+.. ++||+. | |--.+++.+.++.
T Consensus 95 ~ai~l-a~~A~~~Gadavlv~~P~--y~~~s-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La 163 (301)
T 1xky_A 95 ASIDL-TKKATEVGVDAVMLVAPY--YNKPS-------QEGMYQHFKAIAEST-PLPVMLYNVPGRSIVQISVDTVVRLS 163 (301)
T ss_dssp HHHHH-HHHHHHTTCSEEEEECCC--SSCCC-------HHHHHHHHHHHHHTC-SSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred HHHHH-HHHHHhcCCCEEEEcCCC--CCCCC-------HHHHHHHHHHHHHhc-CCCEEEEeCccccCCCCCHHHHHHHH
Confidence 55554 455678999999876421 11110 011245666776654 899864 4 4446788877775
Q ss_pred H
Q 017176 227 R 227 (376)
Q Consensus 227 ~ 227 (376)
+
T Consensus 164 ~ 164 (301)
T 1xky_A 164 E 164 (301)
T ss_dssp T
T ss_pred c
Confidence 4
No 374
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=91.35 E-value=1.2 Score=42.15 Aligned_cols=94 Identities=13% Similarity=0.077 Sum_probs=58.7
Q ss_pred ccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEE
Q 017176 132 NTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFT 211 (376)
Q Consensus 132 ~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi 211 (376)
..+.|+.+.+..|++. +++ .+.++..|+|+|.+|....... ..+....... ..++.+.++++.. ++||+
T Consensus 114 ~~~~pv~~~i~~~~~~----~~~----~~~~~~~gad~i~i~~~~~~~~-~~~~~~~~~~-~~~~~i~~vr~~~-~~Pv~ 182 (349)
T 1p0k_A 114 NPNGLIFANLGSEATA----AQA----KEAVEMIGANALQIHLNVIQEI-VMPEGDRSFS-GALKRIEQICSRV-SVPVI 182 (349)
T ss_dssp CSSSCEEEEEETTCCH----HHH----HHHHHHTTCSEEEEEECTTTTC---------CT-THHHHHHHHHHHC-SSCEE
T ss_pred CCCceeEEeecCCCCH----HHH----HHHHHhcCCCeEEecccchhhh-cCCCCCcchH-HHHHHHHHHHHHc-CCCEE
Confidence 3578888877655432 222 2345568999999987543111 1110001110 1256777777765 89998
Q ss_pred Ee--cCCCCHHHHHHHHHcCcCeeEEc
Q 017176 212 LN--GGINTVDEVNAALRKGAHHVMVG 236 (376)
Q Consensus 212 ~n--GgI~s~~da~~~l~~Gad~VmiG 236 (376)
.- |...+.+++..+.+.|||+|.+.
T Consensus 183 vK~~~~~~~~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 183 VKEVGFGMSKASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp EEEESSCCCHHHHHHHHHHTCSEEEEE
T ss_pred EEecCCCCCHHHHHHHHHcCCCEEEEc
Confidence 75 55578999999989999999984
No 375
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=91.34 E-value=2.6 Score=38.29 Aligned_cols=141 Identities=16% Similarity=0.163 Sum_probs=76.3
Q ss_pred CCCCEEEEec-CCCHHHHHHHHHHHH-HCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEE
Q 017176 63 EQHPIVLQIG-GSNLDNLAKATELAN-AYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVK 140 (376)
Q Consensus 63 ~~~p~~vQL~-g~~~~~~~~aa~~~~-~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vK 140 (376)
.+.++++=+- |--|.....+++.+. ++|+|.|.+|. ||| .+.++...+..+.-|+|=
T Consensus 75 ~g~~VflDlK~~DI~nTv~~~a~~~~~~lg~d~vTvh~------------~~G---------~~~l~~~~~~~~~gv~vL 133 (255)
T 3qw3_A 75 AGIPVVLDAKRGDIADTADAYATSAFKHLNAHAITASP------------YMG---------SDSLQPFMRYPDKAVFVL 133 (255)
T ss_dssp TTCCBEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECC------------TTC---------HHHHHHHHTCTTSEEEEE
T ss_pred CCCeEEEEeecCCcHHHHHHHHHHHHHHcCCCEEEEcc------------cCC---------HHHHHHHHHhhCCceEEE
Confidence 5667777664 445667777777664 69999999973 222 123333333333344444
Q ss_pred ecCCCCC---Cc-------c-HHHHHHHHHHH-hhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCC
Q 017176 141 CRIGVDD---HD-------S-YNQLCDFIYKV-SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDL 208 (376)
Q Consensus 141 iR~g~~~---~~-------~-~~~~~~~i~~~-~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~i 208 (376)
++.+-++ .. + .+.+++. ++. ..+.|.+.+.+.+.. -+.+..+++..++.
T Consensus 134 ~~tS~~~~~~~q~~~~~~~~~~~~V~~~-a~~~~~~~g~~GvV~~at~------------------~~e~~~ir~~~~~~ 194 (255)
T 3qw3_A 134 CKTSNKGSNDLQCLRVGDRYLYEAVAER-AEGPWNVNGNVGLVVGATD------------------PVALARVRARAPTL 194 (255)
T ss_dssp EECCSGGGGTTTTSEETTEEHHHHHHHH-HHTGGGGGSCEEEEECSSC------------------HHHHHHHHHHCSSC
T ss_pred EeCCCccHHHHHhcccCCCCHHHHHHHH-HHHHhhhhCCeEEEECCCC------------------HHHHHHHHHHCCCC
Confidence 4433221 11 2 2344443 233 445789988776532 12234455555555
Q ss_pred eEEEecCCCC-HHHHHHHHHcCcC----e--eEEchHHhhCCc
Q 017176 209 TFTLNGGINT-VDEVNAALRKGAH----H--VMVGRAAYQNPW 244 (376)
Q Consensus 209 pVi~nGgI~s-~~da~~~l~~Gad----~--VmiGRa~l~~P~ 244 (376)
+++. =||.- ..+..++++.|+| + +.+||+++..++
T Consensus 195 ~~l~-PGIg~qg~tp~~a~~~G~d~~~~~~livvGR~I~~A~d 236 (255)
T 3qw3_A 195 WFLV-PGIGAQGGSLKASLDAGLRADGSGMLINVSRGLARAAD 236 (255)
T ss_dssp CEEE-CCC-----CHHHHHHHHCCTTSCCEEEEESHHHHTSSC
T ss_pred eEEE-CCcCCCCCCHHHHHHcCCCcccCeeEEEeChhhcCCCC
Confidence 5543 33321 1244555666788 5 999999998765
No 376
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=91.28 E-value=2.3 Score=36.81 Aligned_cols=120 Identities=13% Similarity=0.052 Sum_probs=68.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcc-cCccEEE--EecCCCCCCcc
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN-TNVPVSV--KCRIGVDDHDS 150 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~-~~~pv~v--KiR~g~~~~~~ 150 (376)
.+.++..+.++.+. .|+|.|++.. |.. . .+| .++++++|+. .+.|+.+ |+..+ .
T Consensus 10 ~~~~~~~~~~~~~~-~~~diie~G~--p~~--~---~~g----------~~~i~~ir~~~~~~~i~~~~~~~~~----~- 66 (211)
T 3f4w_A 10 LTLPEAMVFMDKVV-DDVDIIEVGT--PFL--I---REG----------VNAIKAIKEKYPHKEVLADAKIMDG----G- 66 (211)
T ss_dssp CCHHHHHHHHHHHG-GGCSEEEECH--HHH--H---HHT----------THHHHHHHHHCTTSEEEEEEEECSC----H-
T ss_pred CCHHHHHHHHHHhh-cCccEEEeCc--HHH--H---hcc----------HHHHHHHHHhCCCCEEEEEEEeccc----h-
Confidence 45666666666664 4899999865 542 1 123 3567777776 4778754 33321 1
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEe-cCCCCH-HHHHHHHHc
Q 017176 151 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN-GGINTV-DEVNAALRK 228 (376)
Q Consensus 151 ~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~n-GgI~s~-~da~~~l~~ 228 (376)
+..+ +.+.++|+|.|++|..... -....+.+..++. +++++.. =...++ +.++.+.+.
T Consensus 67 -~~~~----~~~~~~Gad~v~v~~~~~~--------------~~~~~~~~~~~~~-g~~~~v~~~~~~t~~~~~~~~~~~ 126 (211)
T 3f4w_A 67 -HFES----QLLFDAGADYVTVLGVTDV--------------LTIQSCIRAAKEA-GKQVVVDMICVDDLPARVRLLEEA 126 (211)
T ss_dssp -HHHH----HHHHHTTCSEEEEETTSCH--------------HHHHHHHHHHHHH-TCEEEEECTTCSSHHHHHHHHHHH
T ss_pred -HHHH----HHHHhcCCCEEEEeCCCCh--------------hHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHHc
Confidence 1112 2234699999999974310 0122233333443 5666542 335565 557777779
Q ss_pred CcCeeEEc
Q 017176 229 GAHHVMVG 236 (376)
Q Consensus 229 Gad~VmiG 236 (376)
|+|.|.+.
T Consensus 127 g~d~i~v~ 134 (211)
T 3f4w_A 127 GADMLAVH 134 (211)
T ss_dssp TCCEEEEE
T ss_pred CCCEEEEc
Confidence 99998774
No 377
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=91.23 E-value=8.9 Score=35.24 Aligned_cols=153 Identities=16% Similarity=0.122 Sum_probs=92.5
Q ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 62 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 62 ~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
....|+++.+.+++.++-.+.++.++++|+|++-+- .|.-. + -..+-+.+-.++|.+++++|+.+--
T Consensus 68 ~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~--~P~y~--~---------~~~~~l~~~f~~ia~a~~lPiilYn 134 (291)
T 3tak_A 68 NKRIPIIAGTGANSTREAIELTKAAKDLGADAALLV--TPYYN--K---------PTQEGLYQHYKAIAEAVELPLILYN 134 (291)
T ss_dssp TTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEE--CCCSS--C---------CCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEc--CCCCC--C---------CCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 456799999999999999999999999999999874 45421 1 1346677888888888899998763
Q ss_pred ---cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEEEecCCC
Q 017176 142 ---RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGIN 217 (376)
Q Consensus 142 ---R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~nGgI~ 217 (376)
|.|.+- +.+ + +.++.+--.+-.|--..+ ++..+.++++.. +++. +.+|+
T Consensus 135 ~P~~tg~~l--~~~-~---~~~La~~pnivgiK~ssg------------------d~~~~~~~~~~~~~~f~-v~~G~-- 187 (291)
T 3tak_A 135 VPGRTGVDL--SND-T---AVRLAEIPNIVGIKDATG------------------DVPRGKALIDALNGKMA-VYSGD-- 187 (291)
T ss_dssp CHHHHSCCC--CHH-H---HHHHTTSTTEEEEEECSC------------------CHHHHHHHHHHHTTSSE-EEECC--
T ss_pred cccccCCCC--CHH-H---HHHHHcCCCEEEEEeCCC------------------CHHHHHHHHHHcCCCeE-EEECc--
Confidence 223332 222 2 233432222333332211 134444544433 2444 45665
Q ss_pred CHHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhC
Q 017176 218 TVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYG 256 (376)
Q Consensus 218 s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g 256 (376)
-+.+...+..|++|+..+.+-+ -|..+.+.++....|
T Consensus 188 -d~~~~~~l~~G~~G~is~~~n~-~P~~~~~l~~a~~~G 224 (291)
T 3tak_A 188 -DETAWELMLLGADGNISVTANI-APKAMSEVCAVAIAK 224 (291)
T ss_dssp -HHHHHHHHHTTCCEEEESGGGT-CHHHHHHHHHHHHTT
T ss_pred -HHHHHHHHHCCCCEEEechhhh-cHHHHHHHHHHHHCC
Confidence 2345566778999999877653 466654444443344
No 378
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=91.22 E-value=1.7 Score=41.90 Aligned_cols=124 Identities=6% Similarity=0.010 Sum_probs=82.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccH
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~ 151 (376)
..++.+++.++.+.+.||..+-+..|. .+++.-.+.++++|+.+ ++.+.|-.--+|+ .
T Consensus 163 ~~~~~~~~~~~~~~~~G~~~~Kikvg~----------------~~~~~d~~~v~avR~~~G~~~~l~vDaN~~~~----~ 222 (388)
T 4h83_A 163 EPLGSIADEMHNYQELGLAGVKFKVGG----------------LSAAEDAARITAAREAAGDDFIICIDANQGYK----P 222 (388)
T ss_dssp CTTCSHHHHHHHHHHHTBSEEEEECSS----------------SCHHHHHHHHHHHHHHHCSSSEEEEECTTCBC----H
T ss_pred CCHHHHHHHHHHHHHcCCceEeecCCC----------------CCHHHHHHHHHHHHHhcCCCeEEEEecCcCCC----H
Confidence 345778888888888899999885431 23344456677888776 4556665555564 3
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCc-ccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cC
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPP-LKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KG 229 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~-~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~G 229 (376)
++.+++ .+.+++.++.+|. . .+++ -.++..+++.+.. ++||.+.=.+.+..++.++++ ..
T Consensus 223 ~~A~~~-~~~l~~~~~~~iE----e------------P~~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~a 284 (388)
T 4h83_A 223 AVAVDL-SRRIADLNIRWFE----E------------PVEWHNDKRSMRDVRYQG-SVPVCAGQTEFSASGCRDLMETGA 284 (388)
T ss_dssp HHHHHH-HHHTTTSCCCCEE----S------------CBCSTTHHHHHHHHHHHS-SSCEEECTTCSSHHHHHHHHHHTC
T ss_pred HHHHHH-HHHhhhcCcceee----c------------CcccccchHHHHHHHhhc-CCCccCCccccChHhHHHHHHcCC
Confidence 444444 3456778877664 1 1111 1255566666664 899999999999999999998 45
Q ss_pred cCeeEE
Q 017176 230 AHHVMV 235 (376)
Q Consensus 230 ad~Vmi 235 (376)
+|.|++
T Consensus 285 ~d~i~~ 290 (388)
T 4h83_A 285 IDVCNF 290 (388)
T ss_dssp CSEECC
T ss_pred CCeEee
Confidence 787754
No 379
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=90.99 E-value=1.2 Score=38.87 Aligned_cols=82 Identities=11% Similarity=0.041 Sum_probs=52.9
Q ss_pred CccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCe-EEE
Q 017176 134 NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLT-FTL 212 (376)
Q Consensus 134 ~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ip-Vi~ 212 (376)
..|+..-++. . +.+++.+.+. .+.+.|+++|.+.-.+. ...+.+.++.+.+ ++| +++
T Consensus 6 ~~~i~~~i~~--~---d~~~~~~~~~-~~~~~G~~~i~l~~~~~---------------~~~~~i~~i~~~~-~~~l~vg 63 (212)
T 2v82_A 6 KLPLIAILRG--I---TPDEALAHVG-AVIDAGFDAVEIPLNSP---------------QWEQSIPAIVDAY-GDKALIG 63 (212)
T ss_dssp SSCEEEECTT--C---CHHHHHHHHH-HHHHHTCCEEEEETTST---------------THHHHHHHHHHHH-TTTSEEE
T ss_pred CCCEEEEEeC--C---CHHHHHHHHH-HHHHCCCCEEEEeCCCh---------------hHHHHHHHHHHhC-CCCeEEE
Confidence 4566665553 2 2334444333 34568999998853321 0145566666654 444 457
Q ss_pred ecCCCCHHHHHHHHHcCcCeeEEch
Q 017176 213 NGGINTVDEVNAALRKGAHHVMVGR 237 (376)
Q Consensus 213 nGgI~s~~da~~~l~~Gad~VmiGR 237 (376)
.|.+.+.+++..+++.|||+|.+|.
T Consensus 64 ~g~~~~~~~i~~a~~~Gad~V~~~~ 88 (212)
T 2v82_A 64 AGTVLKPEQVDALARMGCQLIVTPN 88 (212)
T ss_dssp EECCCSHHHHHHHHHTTCCEEECSS
T ss_pred eccccCHHHHHHHHHcCCCEEEeCC
Confidence 7899999999999999999998764
No 380
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=90.86 E-value=1.7 Score=40.62 Aligned_cols=88 Identities=14% Similarity=0.128 Sum_probs=54.7
Q ss_pred HHHHHHHHCCCCEEEecCCCCCccc-cCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccHHHHHHHH
Q 017176 81 KATELANAYNYDEINLNCGCPSPKV-AGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFI 158 (376)
Q Consensus 81 ~aa~~~~~~G~d~IeiN~gcP~~~v-~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~~~~~~i 158 (376)
-.|++++++|||.|=+...+-.... ...|. | .-..+.+..-++.|.+.+ +.||++-+-.|+.+. +.+.+.+
T Consensus 29 ~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~-~---~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~~---~~v~~tv 101 (302)
T 3fa4_A 29 LSARVALSAGFDALYMTGAGTAASVHGQADL-G---ICTLNDMRANAEMISNISPSTPVIADADTGYGGP---IMVARTT 101 (302)
T ss_dssp HHHHHHHTTTCSCEEECHHHHHHHHHSCCSS-S---CCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSSH---HHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCcHHHHHHHcCCCCC-C---cCCHHHHHHHHHHHHhhccCCCEEEECCCCCCCH---HHHHHHH
Confidence 4678889999999977421111000 01111 1 223466667777887764 899999999997543 2334433
Q ss_pred HHHhhcCCccEEEEccCc
Q 017176 159 YKVSSLSPTRHFIIHSRK 176 (376)
Q Consensus 159 ~~~~e~~Gvd~I~vh~r~ 176 (376)
. .++++|++.|++-+..
T Consensus 102 ~-~l~~aGaagv~iEDq~ 118 (302)
T 3fa4_A 102 E-QYSRSGVAAFHIEDQV 118 (302)
T ss_dssp H-HHHHTTCCEEEECSBC
T ss_pred H-HHHHcCCcEEEECCCC
Confidence 3 3456999999998754
No 381
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=90.78 E-value=11 Score=35.26 Aligned_cols=153 Identities=14% Similarity=0.096 Sum_probs=93.6
Q ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 62 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 62 ~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
....|+++++.+++.++-.+.++.++++|+|++-+- .|... + -..+.+.+-.++|.+++++||.+--
T Consensus 91 ~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~--~P~y~--~---------~s~~~l~~~f~~va~a~~lPiilYn 157 (315)
T 3na8_A 91 AHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVL--PISYW--K---------LNEAEVFQHYRAVGEAIGVPVMLYN 157 (315)
T ss_dssp TTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEC--CCCSS--C---------CCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC--CCCCC--C---------CCHHHHHHHHHHHHHhCCCcEEEEe
Confidence 456799999999999999999999999999999883 45421 1 1346778888888888899998764
Q ss_pred ---cCCCCCCccHHHHHHHHHHH-hhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCC-CCeEEEecCC
Q 017176 142 ---RIGVDDHDSYNQLCDFIYKV-SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGI 216 (376)
Q Consensus 142 ---R~g~~~~~~~~~~~~~i~~~-~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi~nGgI 216 (376)
|.|.+- +. +++ .++ .+--.+-.|--..+ ++..+.++++..+ ++.|+ +|+=
T Consensus 158 ~P~~tg~~l--~~-~~~---~~L~a~~pnIvgiKdssg------------------d~~~~~~~~~~~~~~f~v~-~G~D 212 (315)
T 3na8_A 158 NPGTSGIDM--SV-ELI---LRIVREVDNVTMVKESTG------------------DIQRMHKLRLLGEGRVPFY-NGCN 212 (315)
T ss_dssp CHHHHSCCC--CH-HHH---HHHHHHSTTEEEEEECSS------------------CHHHHHHHHHHTTTCSCEE-ECCG
T ss_pred CcchhCcCC--CH-HHH---HHHHhcCCCEEEEECCCC------------------CHHHHHHHHHHcCCCEEEE-eCch
Confidence 233332 22 222 233 22223433332221 1444555555443 44444 4442
Q ss_pred CCHHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhC
Q 017176 217 NTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYG 256 (376)
Q Consensus 217 ~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g 256 (376)
+.+...+..|++|++.+.+-+ -|..+.+.++....|
T Consensus 213 ---~~~l~~l~~G~~G~is~~an~-~P~~~~~l~~a~~~G 248 (315)
T 3na8_A 213 ---PLALEAFVAGAKGWCSAAPNL-IPTLNGQLYQAVLDG 248 (315)
T ss_dssp ---GGHHHHHHHTCSEEEESGGGT-CHHHHHHHHHHHHTT
T ss_pred ---HHHHHHHHCCCCEEEechhhh-CHHHHHHHHHHHhcC
Confidence 224556667999999887754 466654444443344
No 382
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=90.70 E-value=3.9 Score=37.78 Aligned_cols=127 Identities=13% Similarity=0.124 Sum_probs=79.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccH
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~ 151 (376)
-|.+.+.+-++.+.+.|.|+|-++.. +|+ +..| ..+.-.++++.+.+.+ .+||.+-+.. .++
T Consensus 21 iD~~~l~~lv~~li~~Gv~gl~~~Gt--------tGE-~~~L--s~~Er~~v~~~~~~~~~gr~pviaGvg~-----~~t 84 (294)
T 3b4u_A 21 VDIDAMIAHARRCLSNGCDSVTLFGT--------TGE-GCSV--GSRERQAILSSFIAAGIAPSRIVTGVLV-----DSI 84 (294)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESST--------TTT-GGGS--CHHHHHHHHHHHHHTTCCGGGEEEEECC-----SSH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc--------ccC-hhhC--CHHHHHHHHHHHHHHhCCCCcEEEeCCC-----ccH
Confidence 36788889999998999999988642 344 3333 4555567777776655 4788875442 234
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCC-CCCCCCCCCCcccHHHHHHHHhhCC--CCeEEE-e-----cCCCCHHHH
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNG-ISPAENRTIPPLKYEYYYALLRDFP--DLTFTL-N-----GGINTVDEV 222 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g-~~~~~~~~~~~~~~~~v~~~~~~~~--~ipVi~-n-----GgI~s~~da 222 (376)
.+.++. ++.+++.|+|++-+-.-. +.. .+ ...-++++.++.+..| ++||+. | |--.+++.+
T Consensus 85 ~~ai~l-a~~A~~~Gadavlv~~P~--y~~~~s-------~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~ 154 (294)
T 3b4u_A 85 EDAADQ-SAEALNAGARNILLAPPS--YFKNVS-------DDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELV 154 (294)
T ss_dssp HHHHHH-HHHHHHTTCSEEEECCCC--SSCSCC-------HHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHH
T ss_pred HHHHHH-HHHHHhcCCCEEEEcCCc--CCCCCC-------HHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHH
Confidence 555554 455678999999886421 111 11 0112456667766654 788764 4 434578887
Q ss_pred HHHH
Q 017176 223 NAAL 226 (376)
Q Consensus 223 ~~~l 226 (376)
.++.
T Consensus 155 ~~La 158 (294)
T 3b4u_A 155 GRLK 158 (294)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7776
No 383
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=90.53 E-value=2.2 Score=39.40 Aligned_cols=109 Identities=11% Similarity=0.095 Sum_probs=62.3
Q ss_pred ccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEE-ccCccccCCCCCCCCCC
Q 017176 111 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII-HSRKALLNGISPAENRT 189 (376)
Q Consensus 111 yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~v-h~r~~~~~g~~~~~~~~ 189 (376)
.|+..+++.+++.++- .++.||.+|.-...+- +++...+ .. +.+.|.+.|++ |.++. + +.. +
T Consensus 116 IgA~~~~n~~LLr~va-----~~gkPVilK~G~~~t~-~ei~~av---e~-i~~~Gn~~i~L~erg~~-y-~~~---~-- 178 (285)
T 3sz8_A 116 VPAFLARQTDLVVAIA-----KAGKPVNVKKPQFMSP-TQLKHVV---SK-CGEVGNDRVMLCERGSS-F-GYD---N-- 178 (285)
T ss_dssp ECGGGTTCHHHHHHHH-----HTSSCEEEECCTTSCG-GGTHHHH---HH-HHHTTCCCEEEEECCEE-C-SSS---C--
T ss_pred ECccccCCHHHHHHHH-----ccCCcEEEeCCCCCCH-HHHHHHH---HH-HHHcCCCcEEEEeCCCC-C-CCC---c--
Confidence 3777778888655532 3688999997663221 2233332 22 33577765555 66552 2 111 0
Q ss_pred CCcccHHHHHHHHhhCCCCeEEEecCCC-----------C------HHHHHHHHHcCcCeeEEch
Q 017176 190 IPPLKYEYYYALLRDFPDLTFTLNGGIN-----------T------VDEVNAALRKGAHHVMVGR 237 (376)
Q Consensus 190 ~~~~~~~~v~~~~~~~~~ipVi~nGgI~-----------s------~~da~~~l~~Gad~VmiGR 237 (376)
..+++..+..+++.++++||+...+=. . ..-+..++..||||++|=+
T Consensus 179 -~~vdl~~i~~lk~~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~ 242 (285)
T 3sz8_A 179 -LVVDMLGFRQMAETTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEA 242 (285)
T ss_dssp -EECCTTHHHHHHHHTTSCCEEEETTTTCC---------------HHHHHHHHHHHCCSEEEEEE
T ss_pred -CccCHHHHHHHHHhCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEe
Confidence 113455666677666469999842221 1 2345566778999998843
No 384
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=90.51 E-value=5.3 Score=37.12 Aligned_cols=125 Identities=12% Similarity=0.088 Sum_probs=75.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 152 (376)
|.+.+.+-++.+.+.|.|+|-++.. +|+ +.+| ..+.-.++++.+.+.+ .+||.+-+.. .++.
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~Gt--------TGE-~~~L--s~eEr~~vi~~~~~~~~grvpViaGvg~-----~st~ 94 (306)
T 1o5k_A 31 DLESYERLVRYQLENGVNALIVLGT--------TGE-SPTV--NEDEREKLVSRTLEIVDGKIPVIVGAGT-----NSTE 94 (306)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSG--------GGT-GGGC--CHHHHHHHHHHHHHHHTTSSCEEEECCC-----SCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcc--------ccc-hhhC--CHHHHHHHHHHHHHHhCCCCeEEEcCCC-----ccHH
Confidence 6788899999998999999988641 344 3333 3444455555555443 4788875432 2345
Q ss_pred HHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE-e-----cCCCCHHHHHHHH
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL-N-----GGINTVDEVNAAL 226 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~-n-----GgI~s~~da~~~l 226 (376)
+.++. ++.+++.|+|++-+-.-. +...+ ...-++++.++.+.. ++||+. | |--.+++.+.++.
T Consensus 95 ~ai~l-a~~A~~~Gadavlv~~P~--y~~~s-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La 163 (306)
T 1o5k_A 95 KTLKL-VKQAEKLGANGVLVVTPY--YNKPT-------QEGLYQHYKYISERT-DLGIVVYNVPGRTGVNVLPETAARIA 163 (306)
T ss_dssp HHHHH-HHHHHHHTCSEEEEECCC--SSCCC-------HHHHHHHHHHHHTTC-SSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHH-HHHHHhcCCCEEEECCCC--CCCCC-------HHHHHHHHHHHHHhC-CCCEEEEeCccccCcCCCHHHHHHHH
Confidence 55554 445678999999876421 11110 011145666666654 789864 4 4345788877776
No 385
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=90.42 E-value=11 Score=35.05 Aligned_cols=153 Identities=12% Similarity=0.074 Sum_probs=93.6
Q ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 62 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 62 ~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
....|+++.+.+++.++-.+.++.++++|+|++-+- .|.-. + -..+-+.+-.++|.+++++||.+--
T Consensus 89 ~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~--~P~y~--~---------~~~~~l~~~f~~va~a~~lPiilYn 155 (315)
T 3si9_A 89 AKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVV--TPYYN--R---------PNQRGLYTHFSSIAKAISIPIIIYN 155 (315)
T ss_dssp TTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEE--CCCSS--C---------CCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEC--CCCCC--C---------CCHHHHHHHHHHHHHcCCCCEEEEe
Confidence 456799999999999999999999999999999874 45421 1 1346677888888888899998864
Q ss_pred ---cCCCCCCccHHHHHHHHHHHhh-cCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEEEecCC
Q 017176 142 ---RIGVDDHDSYNQLCDFIYKVSS-LSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGI 216 (376)
Q Consensus 142 ---R~g~~~~~~~~~~~~~i~~~~e-~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~nGgI 216 (376)
|.|.+- +. +++ .++.+ --.+-.|--..+. +..+.++++.. +++.| .+|+=
T Consensus 156 ~P~~tg~~l--~~-~~~---~~La~~~pnIvgiKdssgd------------------~~~~~~l~~~~~~~f~v-~~G~d 210 (315)
T 3si9_A 156 IPSRSVIDM--AV-ETM---RDLCRDFKNIIGVKDATGK------------------IERASEQREKCGKDFVQ-LSGDD 210 (315)
T ss_dssp CHHHHSCCC--CH-HHH---HHHHHHCTTEEEEEECSCC------------------THHHHHHHHHHCSSSEE-EESCG
T ss_pred CchhhCCCC--CH-HHH---HHHHhhCCCEEEEEeCCCC------------------HHHHHHHHHHcCCCeEE-EecCH
Confidence 334332 22 222 33333 2234333322211 23344444433 24544 56652
Q ss_pred CCHHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhC
Q 017176 217 NTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYG 256 (376)
Q Consensus 217 ~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g 256 (376)
+.+...+..|++|++.+.+-+ -|..+.+.++....|
T Consensus 211 ---~~~l~~l~~G~~G~is~~an~-~P~~~~~l~~a~~~G 246 (315)
T 3si9_A 211 ---CTALGFNAHGGVGCISVSSNV-APKLCAQLHAACLCS 246 (315)
T ss_dssp ---GGHHHHHHTTCCEEEESGGGT-CHHHHHHHHHHHHTT
T ss_pred ---HHHHHHHHcCCCEEEecHHHh-hHHHHHHHHHHHHcC
Confidence 224456678999999887754 377655544444445
No 386
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=90.39 E-value=4.4 Score=38.17 Aligned_cols=127 Identities=9% Similarity=0.035 Sum_probs=78.1
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccH
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~ 151 (376)
-|.+.+.+-++.+.+.|.|+|-++.. +|+ +..| ..+.-.++++.+++.+ .+||.+-+.. .++
T Consensus 52 iD~~~l~~lv~~li~~Gv~Gl~v~Gt--------TGE-~~~L--s~eEr~~vi~~~ve~~~grvpViaGvg~-----~st 115 (332)
T 2r8w_A 52 VDIEAFSALIARLDAAEVDSVGILGS--------TGI-YMYL--TREERRRAIEAAATILRGRRTLMAGIGA-----LRT 115 (332)
T ss_dssp BCHHHHHHHHHHHHHHTCSEEEESST--------TTT-GGGS--CHHHHHHHHHHHHHHHTTSSEEEEEECC-----SSH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc--------ccC-hhhC--CHHHHHHHHHHHHHHhCCCCcEEEecCC-----CCH
Confidence 36788999999888899999988642 344 3333 3444455666555544 4788875432 234
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE-e-----cCCCCHHHHHHH
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL-N-----GGINTVDEVNAA 225 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~-n-----GgI~s~~da~~~ 225 (376)
.+.++. ++.+++.|+|++-+-.- .+...+ ...-++++.++.+.. ++|||. | |--.+++.+.++
T Consensus 116 ~eai~l-a~~A~~~Gadavlv~~P--~Y~~~s-------~~~l~~~f~~VA~a~-~lPiilYn~P~~tg~~l~~e~~~~L 184 (332)
T 2r8w_A 116 DEAVAL-AKDAEAAGADALLLAPV--SYTPLT-------QEEAYHHFAAVAGAT-ALPLAIYNNPTTTRFTFSDELLVRL 184 (332)
T ss_dssp HHHHHH-HHHHHHHTCSEEEECCC--CSSCCC-------HHHHHHHHHHHHHHC-SSCEEEECCHHHHCCCCCHHHHHHH
T ss_pred HHHHHH-HHHHHhcCCCEEEECCC--CCCCCC-------HHHHHHHHHHHHHhc-CCCEEEEeCccccCcCCCHHHHHHH
Confidence 555554 44567899999987642 111111 011245666777664 799865 4 434688888777
Q ss_pred HH
Q 017176 226 LR 227 (376)
Q Consensus 226 l~ 227 (376)
.+
T Consensus 185 a~ 186 (332)
T 2r8w_A 185 AY 186 (332)
T ss_dssp HT
T ss_pred Hc
Confidence 65
No 387
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=90.38 E-value=8.1 Score=35.00 Aligned_cols=127 Identities=12% Similarity=0.100 Sum_probs=72.5
Q ss_pred HHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCC----CccHHHHHH
Q 017176 81 KATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDD----HDSYNQLCD 156 (376)
Q Consensus 81 ~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~----~~~~~~~~~ 156 (376)
+.|..+++.|+|-|||+.+=.. | .+--.... ++.+++.+++||-|=+|+--.+ ..+++.+.+
T Consensus 12 ~~a~~A~~~GAdRIELc~~L~~---------G-GlTPS~g~----i~~~~~~~~ipv~vMIRPR~GdF~Ys~~E~~~M~~ 77 (256)
T 1twd_A 12 ECALTAQQNGADRVELCAAPKE---------G-GLTPSLGV----LKSVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILE 77 (256)
T ss_dssp HHHHHHHHTTCSEEEECBCGGG---------T-CBCCCHHH----HHHHHHHCCSCEEEBCCSSSSCSCCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcCCccc---------C-CCCCCHHH----HHHHHHHcCCceEEEECCCCCCCcCCHHHHHHHHH
Confidence 3556678899999999753111 1 12222223 3444556789999988882111 134555555
Q ss_pred HHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecC---CCCHHHHHHHHH-cCcCe
Q 017176 157 FIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG---INTVDEVNAALR-KGAHH 232 (376)
Q Consensus 157 ~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGg---I~s~~da~~~l~-~Gad~ 232 (376)
.+. .+.+.|+|.+.+-.=+. .| .++.+.+.++++...++||..-=- +.++..+.+.+. .|++-
T Consensus 78 Di~-~~~~~GadGvV~G~Lt~--dg----------~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG~~r 144 (256)
T 1twd_A 78 DVR-TVRELGFPGLVTGVLDV--DG----------NVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIAR 144 (256)
T ss_dssp HHH-HHHHTTCSEEEECCBCT--TS----------SBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHTCCE
T ss_pred HHH-HHHHcCCCEEEEeeECC--CC----------CcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcCCCE
Confidence 444 44579999988643221 11 233566666655444667665322 456666655554 78887
Q ss_pred eE
Q 017176 233 VM 234 (376)
Q Consensus 233 Vm 234 (376)
|.
T Consensus 145 IL 146 (256)
T 1twd_A 145 VL 146 (256)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 388
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=90.38 E-value=11 Score=34.72 Aligned_cols=153 Identities=17% Similarity=0.171 Sum_probs=94.5
Q ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 62 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 62 ~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
....|+++.+.+++.++-.+.++.++++|+|++-+- .|.-. + -..+.+.+-.++|.+++++|+.+--
T Consensus 69 ~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~--~P~y~--~---------~~~~~l~~~f~~ia~a~~lPiilYn 135 (292)
T 3daq_A 69 DKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLI--TPYYN--K---------TNQRGLVKHFEAIADAVKLPVVLYN 135 (292)
T ss_dssp TTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEE--CCCSS--C---------CCHHHHHHHHHHHHHHHCSCEEEEE
T ss_pred CCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEEC--CCCCC--C---------CCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 456799999999999999999999999999999884 34421 1 1345677778888887889998864
Q ss_pred ---cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCC--CeEEEecCC
Q 017176 142 ---RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPD--LTFTLNGGI 216 (376)
Q Consensus 142 ---R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~--ipVi~nGgI 216 (376)
|.|.+- +.+ + +.++.+--.+-.|--..+ ++..+.++++..++ .. +.+|+=
T Consensus 136 ~P~~tg~~l--~~~-~---~~~La~~pnivgiK~ssg------------------d~~~~~~~~~~~~~~~f~-v~~G~d 190 (292)
T 3daq_A 136 VPSRTNMTI--EPE-T---VEILSQHPYIVALKDATN------------------DFEYLEEVKKRIDTNSFA-LYSGND 190 (292)
T ss_dssp CHHHHSCCC--CHH-H---HHHHHTSTTEEEEEECCC------------------CHHHHHHHHTTSCTTTSE-EEESCG
T ss_pred cccccCCCC--CHH-H---HHHHhcCCCEEEEEeCCC------------------CHHHHHHHHHHCCCCCEE-EEECCH
Confidence 334332 222 2 233333222333322211 15556666665543 43 455552
Q ss_pred CCHHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhC
Q 017176 217 NTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYG 256 (376)
Q Consensus 217 ~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g 256 (376)
+.+...+..|++|++.+.+-+ -|..+.+.++....|
T Consensus 191 ---~~~~~~l~~G~~G~is~~~n~-~P~~~~~l~~a~~~g 226 (292)
T 3daq_A 191 ---DNVVEYYQRGGQGVISVIANV-IPKEFQALYDAQQSG 226 (292)
T ss_dssp ---GGHHHHHHTTCCEEEESGGGT-CHHHHHHHHHHHHTT
T ss_pred ---HHHHHHHhcCCCEEEeCHHHh-hHHHHHHHHHHHHcC
Confidence 235556778999999887753 466654444444445
No 389
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=90.36 E-value=7 Score=36.00 Aligned_cols=125 Identities=11% Similarity=0.071 Sum_probs=75.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 152 (376)
|.+.+.+-++.+.+.|.|+|=++.. +|+ +.+| ..+.-.++++.+.+.+ .+||.+-+.. .+..
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~Gt--------tGE-~~~L--s~~Er~~v~~~~~~~~~grvpviaGvg~-----~~t~ 82 (294)
T 2ehh_A 19 DYEALGNLIEFHVDNGTDAILVCGT--------TGE-SPTL--TFEEHEKVIEFAVKRAAGRIKVIAGTGG-----NATH 82 (294)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEESST--------TTT-GGGS--CHHHHHHHHHHHHHHHTTSSEEEEECCC-----SCHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcc--------ccC-hhhC--CHHHHHHHHHHHHHHhCCCCcEEEecCC-----CCHH
Confidence 6788888899888999999988642 344 3333 3444455555555443 4788774332 2345
Q ss_pred HHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE-e-----cCCCCHHHHHHHH
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL-N-----GGINTVDEVNAAL 226 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~-n-----GgI~s~~da~~~l 226 (376)
+.++. ++.+++.|+|++-+-.- .+...+ ...-++++.++.+.. ++||+. | |--.+++.+.++.
T Consensus 83 ~ai~l-a~~A~~~Gadavlv~~P--~y~~~s-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La 151 (294)
T 2ehh_A 83 EAVHL-TAHAKEVGADGALVVVP--YYNKPT-------QRGLYEHFKTVAQEV-DIPIIIYNIPSRTCVEISVDTMFKLA 151 (294)
T ss_dssp HHHHH-HHHHHHTTCSEEEEECC--CSSCCC-------HHHHHHHHHHHHHHC-CSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHH-HHHHHhcCCCEEEECCC--CCCCCC-------HHHHHHHHHHHHHhc-CCCEEEEeCCcccCcCCCHHHHHHHH
Confidence 55554 45567899999987642 111111 011145666777664 788864 4 4446888887776
No 390
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=90.23 E-value=0.87 Score=42.07 Aligned_cols=86 Identities=16% Similarity=0.092 Sum_probs=52.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHH---hcccCccEEEEecCCCCCCcc
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVI---AANTNVPVSVKCRIGVDDHDS 150 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v---~~~~~~pv~vKiR~g~~~~~~ 150 (376)
.+++....+++.+.++|+|+|-..-|- .. |++-..+.+.+.+.++.. ...++.++.||...|+.+
T Consensus 169 ~d~e~i~~A~~ia~eaGADfVKTSTGf--------~~-~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt--- 236 (281)
T 2a4a_A 169 KTEDLIIKTTLAVLNGNADFIKTSTGK--------VQ-INATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISD--- 236 (281)
T ss_dssp CSHHHHHHHHHHHHTTTCSEEECCCSC--------SS-CCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCS---
T ss_pred CcHHHHHHHHHHHHHhCCCEEEeCCCC--------CC-CCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCC---
Confidence 355557899999999999999654221 11 444455666666666554 334467889999999874
Q ss_pred HHHHHHHHHHHhhcCCccEEE
Q 017176 151 YNQLCDFIYKVSSLSPTRHFI 171 (376)
Q Consensus 151 ~~~~~~~i~~~~e~~Gvd~I~ 171 (376)
.++..+++..-.+..|.++++
T Consensus 237 ~e~al~~i~aga~~lG~~w~~ 257 (281)
T 2a4a_A 237 LNTASHYILLARRFLSSLACH 257 (281)
T ss_dssp HHHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHhhhhccccccc
Confidence 445555554444557888866
No 391
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=90.22 E-value=2.8 Score=37.26 Aligned_cols=79 Identities=19% Similarity=0.148 Sum_probs=53.2
Q ss_pred cEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecC
Q 017176 136 PVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG 215 (376)
Q Consensus 136 pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGg 215 (376)
|+..=+|. .+.++..+++ .. +.+.|++.|.+--++. ...+.+++++++++++ +++.|-
T Consensus 18 ~ii~vir~--~~~~~~~~~~---~a-l~~gGv~~iel~~k~~---------------~~~~~i~~l~~~~~~l-~vgaGt 75 (224)
T 1vhc_A 18 KIVPVIAL--DNADDILPLA---DT-LAKNGLSVAEITFRSE---------------AAADAIRLLRANRPDF-LIAAGT 75 (224)
T ss_dssp CEEEEECC--SSGGGHHHHH---HH-HHHTTCCEEEEETTST---------------THHHHHHHHHHHCTTC-EEEEES
T ss_pred CeEEEEeC--CCHHHHHHHH---HH-HHHcCCCEEEEeccCc---------------hHHHHHHHHHHhCcCc-EEeeCc
Confidence 55554565 2323333333 23 3469999988864321 1146677788887665 567777
Q ss_pred CCCHHHHHHHHHcCcCeeEEc
Q 017176 216 INTVDEVNAALRKGAHHVMVG 236 (376)
Q Consensus 216 I~s~~da~~~l~~Gad~VmiG 236 (376)
+.+.+++..+++.|||+|..+
T Consensus 76 vl~~d~~~~A~~aGAd~v~~p 96 (224)
T 1vhc_A 76 VLTAEQVVLAKSSGADFVVTP 96 (224)
T ss_dssp CCSHHHHHHHHHHTCSEEECS
T ss_pred EeeHHHHHHHHHCCCCEEEEC
Confidence 999999999999999999887
No 392
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=90.14 E-value=6.3 Score=36.25 Aligned_cols=132 Identities=11% Similarity=0.058 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 152 (376)
|.+.+.+-++.+.+.|.|+|-++ |.-|-+..-..+.-.++++.+.+.+ .+||.+-+.. .+..
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~-----------GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-----~~t~ 82 (289)
T 2yxg_A 19 DFDGLEENINFLIENGVSGIVAV-----------GTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGS-----NCTE 82 (289)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEES-----------STTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC-----SSHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEC-----------ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-----CCHH
Q ss_pred HHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE------ecCCCCHHHHHHHH
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL------NGGINTVDEVNAAL 226 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~------nGgI~s~~da~~~l 226 (376)
+.++. ++.+++.|+|++-+-. |.-+......-++++.++.+.. ++||+. .|--.+++.+.++.
T Consensus 83 ~ai~l-a~~a~~~Gadavlv~~---------P~y~~~s~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~~~~~~~La 151 (289)
T 2yxg_A 83 EAIEL-SVFAEDVGADAVLSIT---------PYYNKPTQEGLRKHFGKVAESI-NLPIVLYNVPSRTAVNLEPKTVKLLA 151 (289)
T ss_dssp HHHHH-HHHHHHHTCSEEEEEC---------CCSSCCCHHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHH-HHHHHhcCCCEEEECC---------CCCCCCCHHHHHHHHHHHHHhc-CCCEEEEeCccccCcCCCHHHHHHHH
Q ss_pred -H-cCcCee
Q 017176 227 -R-KGAHHV 233 (376)
Q Consensus 227 -~-~Gad~V 233 (376)
+ ..+-+|
T Consensus 152 ~~~pnivgi 160 (289)
T 2yxg_A 152 EEYSNISAV 160 (289)
T ss_dssp HHCTTEEEE
T ss_pred HhCCCEEEE
No 393
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=90.10 E-value=1.4 Score=40.62 Aligned_cols=111 Identities=10% Similarity=0.046 Sum_probs=60.2
Q ss_pred ccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEE-EEccCccccCCCCCCCCCC
Q 017176 111 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHF-IIHSRKALLNGISPAENRT 189 (376)
Q Consensus 111 yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I-~vh~r~~~~~g~~~~~~~~ 189 (376)
.|+..+++.+++.++ . .++.||.+|.-...+ ..++...+ . .+...|...+ .+|.++ .+ ++. .
T Consensus 111 Iga~~~~n~~ll~~~----a-~~~kPV~lk~G~~~t-~~e~~~A~---~-~i~~~Gn~~i~L~~rg~-~~-~~~---~-- 173 (280)
T 2qkf_A 111 LPAFLARQTDLVVAM----A-KTGNVVNIKKPQFLS-PSQMKNIV---E-KFHEAGNGKLILCERGS-SF-GYD---N-- 173 (280)
T ss_dssp ECGGGTTBHHHHHHH----H-HTCCEEEEECCTTSC-GGGHHHHH---H-HHHHTTCCCEEEEECCE-EC-STT---C--
T ss_pred ECcccccCHHHHHHH----H-cCCCcEEEECCCCCC-HHHHHHHH---H-HHHHcCCCeEEEEECCC-CC-CCC---c--
Confidence 477778888855554 2 468999999766322 22333332 2 3346787444 456544 22 111 0
Q ss_pred CCcccHHHHHHHHhhCCCCeEEEe-----------cCCCCH------HHHHHHHHcCcCeeEEchHH
Q 017176 190 IPPLKYEYYYALLRDFPDLTFTLN-----------GGINTV------DEVNAALRKGAHHVMVGRAA 239 (376)
Q Consensus 190 ~~~~~~~~v~~~~~~~~~ipVi~n-----------GgI~s~------~da~~~l~~Gad~VmiGRa~ 239 (376)
..+++..+..+++.++++||+.. |+-... .-+..+.+.||||+||=+=+
T Consensus 174 -~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G~~IE~H~ 239 (280)
T 2qkf_A 174 -LVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLESHP 239 (280)
T ss_dssp -EECCTTHHHHHHHHTTTCCEEEEHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEEEC--
T ss_pred -cccCHHHHHHHHHhCCCCCEEEECCCCccccCccccccCCchhhHHHHHHHHHHcCCCEEEEeecC
Confidence 11234556667666657899984 222222 23444556899999986543
No 394
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=90.07 E-value=2.3 Score=40.21 Aligned_cols=122 Identities=15% Similarity=0.147 Sum_probs=80.1
Q ss_pred ecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCcc
Q 017176 71 IGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDS 150 (376)
Q Consensus 71 L~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~ 150 (376)
+...+++.+.+.++...+ ||..+-+..|.. . -.+.++++|+..+..+.+-..-+|++
T Consensus 130 ~~~~~~e~~~~~a~~~~~-g~~~~K~Kvg~~---------------~----d~~~v~avR~~~~~~l~vDaN~~~t~--- 186 (338)
T 3ijl_A 130 IGIDTPDVVRAKTKECAG-LFNILKVKLGRD---------------N----DKEMIETIRSVTDLPIAVDANQGWKD--- 186 (338)
T ss_dssp CCCCCHHHHHHHHHHHHT-TCSSEEEECSSS---------------C----HHHHHHHHHTTCCCCEEEECTTCCCC---
T ss_pred EeCCCHHHHHHHHHHHHh-cccEEEEecCcH---------------H----HHHHHHHHHhhcCCcEEEECcCCCCC---
Confidence 444688988888887665 899998865421 1 34668888888766566655555632
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCc
Q 017176 151 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGA 230 (376)
Q Consensus 151 ~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Ga 230 (376)
.++.++++ +.+++.++.+|. . .+++-+++..+++.+.. ++||.+.=.+.+..++.+++ ..+
T Consensus 187 ~~~A~~~~-~~l~~~~i~~iE----e------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~~-~a~ 247 (338)
T 3ijl_A 187 RQYALDMI-HWLKEKGIVMIE----Q------------PMPKEQLDDIAWVTQQS-PLPVFADESLQRLGDVAALK-GAF 247 (338)
T ss_dssp HHHHHHHH-HHHHHTTEEEEE----C------------CSCTTCHHHHHHHHHTC-SSCEEESTTCCSGGGTGGGB-TTB
T ss_pred HHHHHHHH-HHHhhCCCCEEE----C------------CCCCCcHHHHHHHHhcC-CCCEEECCCCCCHHHHHHHH-hhC
Confidence 33444443 445677877654 1 12233467777777764 89999988899998877765 457
Q ss_pred CeeE
Q 017176 231 HHVM 234 (376)
Q Consensus 231 d~Vm 234 (376)
|.|+
T Consensus 248 d~i~ 251 (338)
T 3ijl_A 248 TGIN 251 (338)
T ss_dssp SEEE
T ss_pred CEEE
Confidence 7766
No 395
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=90.05 E-value=1.8 Score=39.70 Aligned_cols=111 Identities=14% Similarity=0.105 Sum_probs=61.6
Q ss_pred HHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccC--ccccCCCCCCCCCCCCc------
Q 017176 121 FVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR--KALLNGISPAENRTIPP------ 192 (376)
Q Consensus 121 ~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r--~~~~~g~~~~~~~~~~~------ 192 (376)
.+.+..+.+++.-...+..-+..|..+.+ .+.+.+ +.++++|+|.|.+--- .+...| ..+..
T Consensus 4 ri~~~f~~~~~~~~~ali~yi~aGdP~~~---~~~~~~-~~l~~~GaD~iElgiPfSDP~aDG------p~Iq~a~~~AL 73 (267)
T 3vnd_A 4 RYQAKFAALKAQDKGAFVPFVTIGDPSPE---LSLKII-QTLVDNGADALELGFPFSDPLADG------PVIQGANLRSL 73 (267)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEETTSSCHH---HHHHHH-HHHHHTTCSSEEEECCCSCCTTCC------HHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHH---HHHHHH-HHHHHcCCCEEEECCCCCCCCCCC------HHHHHHHHHHH
Confidence 34555566554434456666677765533 333333 3456799999987511 111111 11110
Q ss_pred -------ccHHHHHHHHhhCCCCeEEEecCCCC-----HH-HHHHHHHcCcCeeEEchHHhh
Q 017176 193 -------LKYEYYYALLRDFPDLTFTLNGGINT-----VD-EVNAALRKGAHHVMVGRAAYQ 241 (376)
Q Consensus 193 -------~~~~~v~~~~~~~~~ipVi~nGgI~s-----~~-da~~~l~~Gad~VmiGRa~l~ 241 (376)
..++.+.++++..+++||+..+-.+. .+ -++++.+.|+|+|.+.---+.
T Consensus 74 ~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~e 135 (267)
T 3vnd_A 74 AAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVE 135 (267)
T ss_dssp HTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGG
T ss_pred HcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHh
Confidence 11566777776646899998765332 23 345555699999999544333
No 396
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=89.86 E-value=4.8 Score=37.26 Aligned_cols=126 Identities=11% Similarity=0.043 Sum_probs=75.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 152 (376)
|.+.+.+-++.+.+.|.|+|=++.. +|+ +.+| ..+.-.++++.+.+.+ .+||.+-+. . .+..
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~~~Gt--------tGE-~~~L--s~~Er~~v~~~~~~~~~grvpviaGvg----~-~~t~ 89 (297)
T 3flu_A 26 HYEQLRDLIDWHIENGTDGIVAVGT--------TGE-SATL--SVEEHTAVIEAVVKHVAKRVPVIAGTG----A-NNTV 89 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESST--------TTT-GGGS--CHHHHHHHHHHHHHHHTTSSCEEEECC----C-SSHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcc--------ccC-cccC--CHHHHHHHHHHHHHHhCCCCcEEEeCC----C-cCHH
Confidence 6788899999998999999988642 344 3333 3444455555555443 478888432 2 2355
Q ss_pred HHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEE-Ee-----cCCCCHHHHHHHH
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAAL 226 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi-~n-----GgI~s~~da~~~l 226 (376)
+.++. ++.+++.|+|++-+..-. +...+ ...-++++.++.+.. ++||+ .| |--.+++.+.++.
T Consensus 90 ~ai~l-a~~a~~~Gadavlv~~P~--y~~~~-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La 158 (297)
T 3flu_A 90 EAIAL-SQAAEKAGADYTLSVVPY--YNKPS-------QEGIYQHFKTIAEAT-SIPMIIYNVPGRTVVSMTNDTILRLA 158 (297)
T ss_dssp HHHHH-HHHHHHTTCSEEEEECCC--SSCCC-------HHHHHHHHHHHHHHC-CSCEEEEECHHHHSSCCCHHHHHHHT
T ss_pred HHHHH-HHHHHHcCCCEEEECCCC--CCCCC-------HHHHHHHHHHHHHhC-CCCEEEEECCchhccCCCHHHHHHHH
Confidence 56654 445678999999876421 11110 011145666666664 78876 33 4445667666554
Q ss_pred H
Q 017176 227 R 227 (376)
Q Consensus 227 ~ 227 (376)
+
T Consensus 159 ~ 159 (297)
T 3flu_A 159 E 159 (297)
T ss_dssp T
T ss_pred c
Confidence 3
No 397
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=89.85 E-value=4.5 Score=39.75 Aligned_cols=121 Identities=12% Similarity=0.179 Sum_probs=81.5
Q ss_pred CCHHHHHHHHHHHHH-CCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccH
Q 017176 74 SNLDNLAKATELANA-YNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~-~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~ 151 (376)
.+|+++++.|+.+.+ .||..+-|..|. .+++.-.+.+++||+.+ +..+.|-..-+|+ .
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~----------------~~~~~Di~rv~avRea~pd~~L~vDaN~~w~----~ 246 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKGGV----------------FPPEQEAEAIQALRDAFPGLPLRLDPNAAWT----V 246 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSS----------------SCHHHHHHHHHHHHHHSTTCCEEEECTTCSC----H
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCC----------------CCHHHHHHHHHHHHHhCCCCcEeccCCCCCC----H
Confidence 578999988887655 599999886432 13444456778888776 4556665555564 3
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH-cCc
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGA 230 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Ga 230 (376)
++.+++ .+.+++. +.+|. .+ .+ +++.++++.+.. ++||.+.=.+.+..++.++++ ..+
T Consensus 247 ~~Ai~~-~~~L~~~-l~~iE----eP------------~~--~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~a~ 305 (441)
T 3vc5_A 247 ETSIRV-GRALDGV-LEYLE----DP------------TP--GIDGMARVAAEV-PMPLATNMCVVTPEHLPAAVERRPI 305 (441)
T ss_dssp HHHHHH-HHHTTTT-CSEEE----CC------------SS--SHHHHHHHHTTS-SSCEEESSSCCSGGGHHHHHHHCCC
T ss_pred HHHHHH-HHHHHHH-HHHhh----cc------------CC--CHHHHHHHHhcC-CCCEEeCCCCCCHHHHHHHHHhCCC
Confidence 454544 3445556 66554 00 11 366677777654 899988878999999999998 568
Q ss_pred CeeEE
Q 017176 231 HHVMV 235 (376)
Q Consensus 231 d~Vmi 235 (376)
|.|++
T Consensus 306 dii~~ 310 (441)
T 3vc5_A 306 GVLLI 310 (441)
T ss_dssp SEEEE
T ss_pred CEEee
Confidence 88876
No 398
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=89.84 E-value=7.5 Score=35.31 Aligned_cols=137 Identities=12% Similarity=0.111 Sum_probs=85.7
Q ss_pred CEEEE-ecC-CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecC
Q 017176 66 PIVLQ-IGG-SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI 143 (376)
Q Consensus 66 p~~vQ-L~g-~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~ 143 (376)
+++++ .++ .+.+...+.++.++++|+|.|-...--|.... ..|-+ +. ..-.++++.+++..++|+..-+
T Consensus 24 ~~vIAgpc~~~~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~---~~~~g-~~---~egl~~l~~~~~~~Gl~~~te~-- 94 (262)
T 1zco_A 24 FTIIAGPCSIESREQIMKVAEFLAEVGIKVLRGGAFKPRTSP---YSFQG-YG---EKALRWMREAADEYGLVTVTEV-- 94 (262)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSSCCCSST---TSCCC-CT---HHHHHHHHHHHHHHTCEEEEEC--
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEEecccCCCc---ccccC-cc---HHHHHHHHHHHHHcCCcEEEee--
Confidence 55444 332 26788888999999999999887654553211 11111 11 4444556666677788887632
Q ss_pred CCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCC-CHHHH
Q 017176 144 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGIN-TVDEV 222 (376)
Q Consensus 144 g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~-s~~da 222 (376)
-+..+.+ ++ .+. +|++-|-+|+.. ++.++.++.+ .+.||+..-|.. |.+++
T Consensus 95 --~d~~~~~----~l----~~~-vd~~kIga~~~~---------------n~~ll~~~a~--~~kPV~lk~G~~~t~~e~ 146 (262)
T 1zco_A 95 --MDTRHVE----LV----AKY-SDILQIGARNSQ---------------NFELLKEVGK--VENPVLLKRGMGNTIQEL 146 (262)
T ss_dssp --CCGGGHH----HH----HHH-CSEEEECGGGTT---------------CHHHHHHHTT--SSSCEEEECCTTCCHHHH
T ss_pred --CCHHhHH----HH----Hhh-CCEEEECccccc---------------CHHHHHHHHh--cCCcEEEecCCCCCHHHH
Confidence 2222222 22 245 899999988642 1455666655 389999998887 99998
Q ss_pred HHHHH----cCc-CeeEEchHH
Q 017176 223 NAALR----KGA-HHVMVGRAA 239 (376)
Q Consensus 223 ~~~l~----~Ga-d~VmiGRa~ 239 (376)
..+++ .|. +.+.+=||.
T Consensus 147 ~~Av~~i~~~Gn~~i~L~~RG~ 168 (262)
T 1zco_A 147 LYSAEYIMAQGNENVILCERGI 168 (262)
T ss_dssp HHHHHHHHTTTCCCEEEEECCB
T ss_pred HHHHHHHHHCCCCeEEEEECCC
Confidence 87775 465 555556664
No 399
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=89.80 E-value=7.3 Score=36.27 Aligned_cols=141 Identities=11% Similarity=0.171 Sum_probs=84.9
Q ss_pred CCCCEEEEecC-CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 63 EQHPIVLQIGG-SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 63 ~~~p~~vQL~g-~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
...|+++.|=+ .+.+ .++.+.++||+-|.+-.+ --.++.+.+...++++...+ .++.|-.-+
T Consensus 71 ~~VPValHlDHg~~~e----~~~~ai~~GFtSVMiDgS------------~~p~eENi~~Tk~vv~~ah~-~gvsVEaEL 133 (305)
T 1rvg_A 71 ARVPVAVHLDHGSSYE----SVLRALRAGFTSVMIDKS------------HEDFETNVRETRRVVEAAHA-VGVTVEAEL 133 (305)
T ss_dssp CSSCEEEEEEEECSHH----HHHHHHHTTCSEEEECCT------------TSCHHHHHHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CCCcEEEECCCCCCHH----HHHHHHHcCCCeeeeCCC------------CCCHHHHHHHHHHHHHHHHH-cCCEEEEEE
Confidence 44566666643 2332 233344567777766432 11234566777777777653 244443333
Q ss_pred c-C-CCCC----------CccHHHHHHHHHHHhhcCCccEEEEccCccc--cCCCCCCCCCCCCcccHHHHHHHHhhCCC
Q 017176 142 R-I-GVDD----------HDSYNQLCDFIYKVSSLSPTRHFIIHSRKAL--LNGISPAENRTIPPLKYEYYYALLRDFPD 207 (376)
Q Consensus 142 R-~-g~~~----------~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~--~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ 207 (376)
- + |.++ ..+.++..+|+ ++.|+|.|.+.=++.. |+. . ..+.++++.+.++.+.. +
T Consensus 134 G~vgg~Ed~~~~~~~~~~yT~Peea~~Fv----~~TgvD~LAvaiGt~HG~Yk~---~---g~p~L~~~~L~~I~~~~-~ 202 (305)
T 1rvg_A 134 GRLAGIEEHVAVDEKDALLTNPEEARIFM----ERTGADYLAVAIGTSHGAYKG---K---GRPFIDHARLERIARLV-P 202 (305)
T ss_dssp SCCCCSCC------CCTTCCCHHHHHHHH----HHHCCSEEEECSSCCSSSBCS---S---SSCCCCHHHHHHHHHHC-C
T ss_pred eeccCccCCccccccccccCCHHHHHHHH----HHHCCCEEEEecCccccccCC---C---CCCccCHHHHHHHHHhc-C
Confidence 2 1 1121 13456666654 4679999999776642 220 0 12567899999998876 6
Q ss_pred CeEEEecCCCCHHHHHHHHH-cCcC
Q 017176 208 LTFTLNGGINTVDEVNAALR-KGAH 231 (376)
Q Consensus 208 ipVi~nGgI~s~~da~~~l~-~Gad 231 (376)
+|++.-|+=.=+++..+++. .|-+
T Consensus 203 vpLVlHGgSsv~~~~~~~~~~~gg~ 227 (305)
T 1rvg_A 203 APLVLHGASAVPPELVERFRASGGE 227 (305)
T ss_dssp SCEEECSCCCCCHHHHHHHHHTTCC
T ss_pred CCEEEeCCCCCcHHHHHHHHhhccc
Confidence 99999999988888888887 6655
No 400
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=89.73 E-value=3.8 Score=38.30 Aligned_cols=124 Identities=14% Similarity=0.080 Sum_probs=76.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 152 (376)
|.+.+.+-++.+.+.|.|+|-++.. +|+ +.+| ..+.-.++++.+.+.+ .+||.+-+. . .++.
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~Gt--------TGE-~~~L--s~~Er~~v~~~~v~~~~grvpViaGvg----~-~~t~ 106 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPLGS--------TGE-GAYL--SDPEWDEVVDFTLKTVAHRVPTIVSVS----D-LTTA 106 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSG--------GGT-GGGS--CHHHHHHHHHHHHHHHTTSSCBEEECC----C-SSHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc--------ccC-hhhC--CHHHHHHHHHHHHHHhCCCCcEEEecC----C-CCHH
Confidence 6788999999999999999977641 344 3333 3444455555555543 478887432 2 2355
Q ss_pred HHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEE-Ee-----cCCCCHHHHHHH
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAA 225 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi-~n-----GgI~s~~da~~~ 225 (376)
+.++. ++.+++.|+|++.+-.-. +...+ ...-++++.++.+.. ++||+ .| |--.+++.+.++
T Consensus 107 ~ai~l-a~~A~~~Gadavlv~~P~--y~~~s-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~L 174 (315)
T 3na8_A 107 KTVRR-AQFAESLGAEAVMVLPIS--YWKLN-------EAEVFQHYRAVGEAI-GVPVMLYNNPGTSGIDMSVELILRI 174 (315)
T ss_dssp HHHHH-HHHHHHTTCSEEEECCCC--SSCCC-------HHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HHHHH-HHHHHhcCCCEEEECCCC--CCCCC-------HHHHHHHHHHHHHhC-CCcEEEEeCcchhCcCCCHHHHHHH
Confidence 66654 455678999999886421 11110 011255667777665 78886 44 445577777777
No 401
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=89.60 E-value=3.1 Score=38.57 Aligned_cols=142 Identities=9% Similarity=-0.017 Sum_probs=70.5
Q ss_pred HHHHHHCCCCEEEecCCCCCc-------cccCCC-----CccccccCC-HHHHHHHHHHHhcccCccEEEEecCCCCCCc
Q 017176 83 TELANAYNYDEINLNCGCPSP-------KVAGHG-----CFGVSLMLD-PKFVGEAMSVIAANTNVPVSVKCRIGVDDHD 149 (376)
Q Consensus 83 a~~~~~~G~d~IeiN~gcP~~-------~v~r~g-----~yG~~l~~~-~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~ 149 (376)
.+.+.+.|+..|.+-.-++.+ ...+.. .+| +.+. .+...+.++..++..+.|+.+-+.. .
T Consensus 31 ~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g--~~~~g~~~~~~~~~~~~~~~~~p~~~~i~g-----~ 103 (314)
T 2e6f_A 31 LRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMG--LPNLGFDFYLKYASDLHDYSKKPLFLSISG-----L 103 (314)
T ss_dssp HHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCC--CCBSCHHHHHHHHHHTCCTTTCCEEEEECC-----S
T ss_pred HHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCC--CCCcCHHHHHHHHHHHhhcCCCcEEEEeCC-----C
Confidence 445678899888875433322 111110 012 1111 2333333333322246888887763 2
Q ss_pred cHHHHHHHHHHHhhcCCcc---EEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE--ecCCCCHHHH--
Q 017176 150 SYNQLCDFIYKVSSLSPTR---HFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL--NGGINTVDEV-- 222 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd---~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~--nGgI~s~~da-- 222 (376)
+.++..+. ++.++++|+| +|.+|-......|. .....-+...++.+.++++.. ++||+. ..++ +.+++
T Consensus 104 ~~~~~~~~-a~~~~~~g~d~~~~iein~~~P~~~g~--~~~g~~~~~~~~ii~~vr~~~-~~Pv~vK~~~~~-~~~~~~~ 178 (314)
T 2e6f_A 104 SVEENVAM-VRRLAPVAQEKGVLLELNLSCPNVPGK--PQVAYDFEAMRTYLQQVSLAY-GLPFGVKMPPYF-DIAHFDT 178 (314)
T ss_dssp SHHHHHHH-HHHHHHHHHHHCCEEEEECCCCCSTTC--CCGGGSHHHHHHHHHHHHHHH-CSCEEEEECCCC-CHHHHHH
T ss_pred CHHHHHHH-HHHHHHhCCCcCceEEEEcCCCCCCCc--hhhcCCHHHHHHHHHHHHHhc-CCCEEEEECCCC-CHHHHHH
Confidence 23344443 3345568999 99998654322221 110000111244566665554 788874 3444 66663
Q ss_pred --HHHHHcC-cCeeEEc
Q 017176 223 --NAALRKG-AHHVMVG 236 (376)
Q Consensus 223 --~~~l~~G-ad~VmiG 236 (376)
..+.+.| +|+|.+-
T Consensus 179 ~a~~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 179 AAAVLNEFPLVKFVTCV 195 (314)
T ss_dssp HHHHHHTCTTEEEEEEC
T ss_pred HHHHHHhcCCceEEEEe
Confidence 3333489 9998753
No 402
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=89.50 E-value=6.1 Score=36.39 Aligned_cols=126 Identities=15% Similarity=0.065 Sum_probs=76.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 152 (376)
|.+.+.+-++.+.+.|.|+|-++.. +|+ +..| ..+.-.++++.+.+.+ .+||.+-+.. .+..
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~Gt--------tGE-~~~L--s~~Er~~v~~~~~~~~~gr~pviaGvg~-----~~t~ 83 (292)
T 2ojp_A 20 CRASLKKLIDYHVASGTSAIVSVGT--------TGE-SATL--NHDEHADVVMMTLDLADGRIPVIAGTGA-----NATA 83 (292)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESST--------TTT-GGGS--CHHHHHHHHHHHHHHHTTSSCEEEECCC-----SSHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc--------ccc-hhhC--CHHHHHHHHHHHHHHhCCCCcEEEecCC-----ccHH
Confidence 6788888899888889999988642 344 3333 3444455555555443 4788775432 2345
Q ss_pred HHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE-e-----cCCCCHHHHHHHH
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL-N-----GGINTVDEVNAAL 226 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~-n-----GgI~s~~da~~~l 226 (376)
+.++. ++.+++.|+|++-+-.- .+...+ ...-++++.++.+.. ++||+. | |--.+++.+.++.
T Consensus 84 ~ai~l-a~~a~~~Gadavlv~~P--~y~~~s-------~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~~~~~~~La 152 (292)
T 2ojp_A 84 EAISL-TQRFNDSGIVGCLTVTP--YYNRPS-------QEGLYQHFKAIAEHT-DLPQILYNVPSRTGCDLLPETVGRLA 152 (292)
T ss_dssp HHHHH-HHHTTTSSCSEEEEECC--CSSCCC-------HHHHHHHHHHHHTTC-SSCEEEECCHHHHSCCCCHHHHHHHH
T ss_pred HHHHH-HHHHHhcCCCEEEECCC--CCCCCC-------HHHHHHHHHHHHHhc-CCCEEEEeCcchhccCCCHHHHHHHH
Confidence 66654 45667899999987642 111111 011145666676654 789864 4 3345788777765
Q ss_pred H
Q 017176 227 R 227 (376)
Q Consensus 227 ~ 227 (376)
+
T Consensus 153 ~ 153 (292)
T 2ojp_A 153 K 153 (292)
T ss_dssp T
T ss_pred c
Confidence 4
No 403
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=89.41 E-value=0.76 Score=42.88 Aligned_cols=67 Identities=7% Similarity=-0.001 Sum_probs=47.7
Q ss_pred HHHhhcCCccEEEEccCc----cccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCee
Q 017176 159 YKVSSLSPTRHFIIHSRK----ALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHV 233 (376)
Q Consensus 159 ~~~~e~~Gvd~I~vh~r~----~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~V 233 (376)
++.++++|++.|.+--.. ...+|.. .-...+.+.++++.+ ++||++-+++...++++.+.+.|||.|
T Consensus 34 A~~ye~~GA~~lsvLe~~~~Di~~~~g~~-------R~~~~~~i~~i~~~v-~iPvl~k~~i~~ide~qil~aaGAD~I 104 (297)
T 4adt_A 34 AKIAEKAGAIGVMILENIPSELRNTDGVA-------RSVDPLKIEEIRKCI-SINVLAKVRIGHFVEAQILEELKVDML 104 (297)
T ss_dssp HHHHHHHTCSEEEECCCCC-----CCCCC-------CCCCHHHHHHHHTTC-CSEEEEEEETTCHHHHHHHHHTTCSEE
T ss_pred HHHHHHcCCCEEEEecCCCCcchhcCCcc-------cCCCHHHHHHHHHhc-CCCEEEeccCCcHHHHHHHHHcCCCEE
Confidence 566788999999876321 1112210 111378888887764 999999988888888888888999999
No 404
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=89.37 E-value=4.3 Score=37.96 Aligned_cols=127 Identities=13% Similarity=0.102 Sum_probs=76.1
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccH
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~ 151 (376)
-|.+.+.+-++.+.+.|.|+|=++.. +|+ +.+| ..+.-.++++.+.+.+ .+||.+-+. . .++
T Consensus 41 iD~~~l~~lv~~li~~Gv~Gl~v~Gt--------TGE-~~~L--s~~Er~~v~~~~v~~~~grvpViaGvg----~-~st 104 (314)
T 3qze_A 41 LDWDSLAKLVDFHLQEGTNAIVAVGT--------TGE-SATL--DVEEHIQVIRRVVDQVKGRIPVIAGTG----A-NST 104 (314)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSG--------GGT-GGGC--CHHHHHHHHHHHHHHHTTSSCEEEECC----C-SSH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc--------ccC-hhhC--CHHHHHHHHHHHHHHhCCCCcEEEeCC----C-cCH
Confidence 36788999999888899999988641 344 3333 3444455555555443 478887432 2 235
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE-e-----cCCCCHHHHHHH
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL-N-----GGINTVDEVNAA 225 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~-n-----GgI~s~~da~~~ 225 (376)
.+.++. ++.+++.|+|++-+-.-. +...+ ...-++++.++.+.. ++||+. | |--.+++.+.++
T Consensus 105 ~eai~l-a~~A~~~Gadavlv~~P~--y~~~s-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~L 173 (314)
T 3qze_A 105 REAVAL-TEAAKSGGADACLLVTPY--YNKPT-------QEGMYQHFRHIAEAV-AIPQILYNVPGRTSCDMLPETVERL 173 (314)
T ss_dssp HHHHHH-HHHHHHTTCSEEEEECCC--SSCCC-------HHHHHHHHHHHHHHS-CSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HHHHHH-HHHHHHcCCCEEEEcCCC--CCCCC-------HHHHHHHHHHHHHhc-CCCEEEEeCccccCCCCCHHHHHHH
Confidence 566654 445678999999876421 11110 011245666676665 788864 3 555677777666
Q ss_pred HH
Q 017176 226 LR 227 (376)
Q Consensus 226 l~ 227 (376)
.+
T Consensus 174 a~ 175 (314)
T 3qze_A 174 SK 175 (314)
T ss_dssp HT
T ss_pred hc
Confidence 54
No 405
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=89.35 E-value=2.3 Score=37.82 Aligned_cols=90 Identities=13% Similarity=0.081 Sum_probs=58.5
Q ss_pred HHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHH
Q 017176 122 VGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYAL 201 (376)
Q Consensus 122 ~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~ 201 (376)
..++++.+++ .|+..=+|. .+.++..+++ .. +.+.|++.|.+.-++. ...+.+.++
T Consensus 16 ~~~~~~~l~~---~~ii~V~r~--~~~~~~~~~~---~a-l~~gGv~~iel~~k~~---------------~~~~~i~~l 71 (225)
T 1mxs_A 16 AARIDAICEK---ARILPVITI--AREEDILPLA---DA-LAAGGIRTLEVTLRSQ---------------HGLKAIQVL 71 (225)
T ss_dssp HHHHHHHHHH---HSEEEEECC--SCGGGHHHHH---HH-HHHTTCCEEEEESSST---------------HHHHHHHHH
T ss_pred HHHHHHHHHH---CCEEEEEeC--CCHHHHHHHH---HH-HHHCCCCEEEEecCCc---------------cHHHHHHHH
Confidence 4455555554 355554564 2323333333 23 3469999988864321 114567777
Q ss_pred HhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEc
Q 017176 202 LRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 236 (376)
Q Consensus 202 ~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiG 236 (376)
+++++++ +++.|-+.+.+++..+++.|||+|..|
T Consensus 72 ~~~~~~~-~igagtvl~~d~~~~A~~aGAd~v~~p 105 (225)
T 1mxs_A 72 REQRPEL-CVGAGTVLDRSMFAAVEAAGAQFVVTP 105 (225)
T ss_dssp HHHCTTS-EEEEECCCSHHHHHHHHHHTCSSEECS
T ss_pred HHhCccc-EEeeCeEeeHHHHHHHHHCCCCEEEeC
Confidence 7777665 467777999999999999999999987
No 406
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=89.29 E-value=4 Score=40.44 Aligned_cols=123 Identities=15% Similarity=0.087 Sum_probs=76.3
Q ss_pred CCHHHHHHHHHHHHH-CCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccH
Q 017176 74 SNLDNLAKATELANA-YNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~-~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~ 151 (376)
.+++++++.|+.+.+ .||..+-+..|.+ +++.-.+.|++||+.. ++.+.|-..-+|+ .
T Consensus 199 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~----------------~~~~Di~rv~avRea~pd~~L~vDaN~~w~----~ 258 (470)
T 3p0w_A 199 MTPAAIARLAEAATERYGFADFKLKGGVM----------------PGAEEMEAIAAIKARFPHARVTLDPNGAWS----L 258 (470)
T ss_dssp CSHHHHHHHHHHHHHHHCCSEEEEECSSS----------------CHHHHHHHHHHHHHHCTTSEEEEECTTBBC----H
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeCCCC----------------CHHHHHHHHHHHHHhCCCCeEEeeCCCCCC----H
Confidence 578999988887765 6999998875532 2233356677787765 3445554444443 4
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCccc----HHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK----YEYYYALLRDFPDLTFTLNGGINTVDEVNAALR 227 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~----~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~ 227 (376)
++.+++ .+.+++. +.+|. . .+++-+ ++.++++.+.. ++||.+.=.+.+..++.++++
T Consensus 259 ~~Ai~~-~~~Le~~-l~~iE----e------------P~~~~d~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~ 319 (470)
T 3p0w_A 259 NEAIAL-CKGQGHL-VAYAE----D------------PCGPEAGYSGREVMAEFKRAT-GIPTATNMIATDWRQMGHAVQ 319 (470)
T ss_dssp HHHHHH-HTTCTTT-CSEEE----S------------CBCCBTTBCHHHHHHHHHHHH-CCCEEESSSSCSHHHHHHHHH
T ss_pred HHHHHH-HHhcccc-ceeec----C------------CCChhhccchHHHHHHHHhcC-CCCEEeCCccCCHHHHHHHHH
Confidence 454443 3344544 54443 0 112222 45566776654 799888666888999999998
Q ss_pred -cCcCeeEE
Q 017176 228 -KGAHHVMV 235 (376)
Q Consensus 228 -~Gad~Vmi 235 (376)
..+|.+++
T Consensus 320 ~~a~div~~ 328 (470)
T 3p0w_A 320 LHAVDIPLA 328 (470)
T ss_dssp TTCCSEEBC
T ss_pred cCCCCEEEe
Confidence 45777644
No 407
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=89.18 E-value=0.5 Score=44.44 Aligned_cols=89 Identities=10% Similarity=0.014 Sum_probs=0.0
Q ss_pred CCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCC-CCeEE-EecCCCCHHHHH
Q 017176 146 DDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFT-LNGGINTVDEVN 223 (376)
Q Consensus 146 ~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi-~nGgI~s~~da~ 223 (376)
+..-+++.+.+.+..+++ .|++.|.+-|.|......+..+. .+.+...++... ++||| +.|+ .+.+.++
T Consensus 27 dg~iD~~~l~~lv~~li~-~Gv~gl~v~GtTGE~~~Ls~eEr-------~~vi~~~~~~~~grvpViaGvg~-st~~ai~ 97 (314)
T 3d0c_A 27 TREIDWKGLDDNVEFLLQ-NGIEVIVPNGNTGEFYALTIEEA-------KQVATRVTELVNGRATVVAGIGY-SVDTAIE 97 (314)
T ss_dssp TCCBCHHHHHHHHHHHHH-TTCSEECTTSGGGTGGGSCHHHH-------HHHHHHHHHHHTTSSEEEEEECS-SHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH-cCCCEEEECcccCChhhCCHHHH-------HHHHHHHHHHhCCCCeEEecCCc-CHHHHHH
Q ss_pred HHHH---cCcCeeEEchHHhhCC
Q 017176 224 AALR---KGAHHVMVGRAAYQNP 243 (376)
Q Consensus 224 ~~l~---~Gad~VmiGRa~l~~P 243 (376)
.+.. .|||+||+-...+..|
T Consensus 98 la~~A~~~Gadavlv~~P~y~~~ 120 (314)
T 3d0c_A 98 LGKSAIDSGADCVMIHQPVHPYI 120 (314)
T ss_dssp HHHHHHHTTCSEEEECCCCCSCC
T ss_pred HHHHHHHcCCCEEEECCCCCCCC
No 408
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=89.16 E-value=4.5 Score=37.85 Aligned_cols=127 Identities=10% Similarity=0.101 Sum_probs=76.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccH
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~ 151 (376)
-|.+.+.+-++.+.+.|.|+|-++.. +|+ +.+| ..+.-.++++.+.+.+ .+||.+-+. . .+.
T Consensus 40 iD~~~l~~li~~li~~Gv~Gl~v~Gt--------TGE-~~~L--s~~Er~~v~~~~v~~~~grvpViaGvg----~-~st 103 (315)
T 3si9_A 40 IDEKAFCNFVEWQITQGINGVSPVGT--------TGE-SPTL--THEEHKRIIELCVEQVAKRVPVVAGAG----S-NST 103 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSST--------TTT-GGGS--CHHHHHHHHHHHHHHHTTSSCBEEECC----C-SSH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCcc--------ccC-cccc--CHHHHHHHHHHHHHHhCCCCcEEEeCC----C-CCH
Confidence 36788999999999999999977641 344 3333 3444455555555443 478877433 2 235
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE-e-----cCCCCHHHHHHH
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL-N-----GGINTVDEVNAA 225 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~-n-----GgI~s~~da~~~ 225 (376)
.+.++. ++.+++.|+|++-+-.- .|...+ ...-++++.++.+.. ++||+. | |--.+++.+.++
T Consensus 104 ~~ai~l-a~~A~~~Gadavlv~~P--~y~~~~-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~L 172 (315)
T 3si9_A 104 SEAVEL-AKHAEKAGADAVLVVTP--YYNRPN-------QRGLYTHFSSIAKAI-SIPIIIYNIPSRSVIDMAVETMRDL 172 (315)
T ss_dssp HHHHHH-HHHHHHTTCSEEEEECC--CSSCCC-------HHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HHHHHH-HHHHHhcCCCEEEECCC--CCCCCC-------HHHHHHHHHHHHHcC-CCCEEEEeCchhhCCCCCHHHHHHH
Confidence 555654 45567899999987642 111110 011245666777665 788864 3 555577777766
Q ss_pred HH
Q 017176 226 LR 227 (376)
Q Consensus 226 l~ 227 (376)
.+
T Consensus 173 a~ 174 (315)
T 3si9_A 173 CR 174 (315)
T ss_dssp HH
T ss_pred Hh
Confidence 65
No 409
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=89.16 E-value=4.3 Score=40.04 Aligned_cols=142 Identities=16% Similarity=0.166 Sum_probs=76.5
Q ss_pred CCCCEEEEec-CCCHHHHHHHHHHHH-HCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEE
Q 017176 63 EQHPIVLQIG-GSNLDNLAKATELAN-AYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVK 140 (376)
Q Consensus 63 ~~~p~~vQL~-g~~~~~~~~aa~~~~-~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vK 140 (376)
.+.++++=+- |--|.....+++.+. ++|+|.|.+|. |||. +.++...+..+.-|+|=
T Consensus 76 ~g~~VflDlK~~DIpnT~~~~a~~~~~~lg~d~vTvh~------------~~G~---------~~l~~~~~~~~~~v~vL 134 (453)
T 3qw4_B 76 AGIPVVLDAKRGDIADTADAYATSAFKHLNAHAITASP------------YMGS---------DSLQPFMRYPDKAVFVL 134 (453)
T ss_dssp TTSCBEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECS------------TTCH---------HHHHHHHTCTTSEEEEE
T ss_pred CCCeEEEEeecCChHHHHHHHHHHHHHHcCCCEEEEcc------------cCCH---------HHHHHHHHhhCCcEEEE
Confidence 4677877764 445777777777644 59999999973 2321 22333333333345544
Q ss_pred ecCCCCC---C-------cc-HHHHHHHHHH-HhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCC
Q 017176 141 CRIGVDD---H-------DS-YNQLCDFIYK-VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDL 208 (376)
Q Consensus 141 iR~g~~~---~-------~~-~~~~~~~i~~-~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~i 208 (376)
++.+-.+ . .+ .+.+++. ++ ...++|.+.+.+.+.. -+.+..+++..++.
T Consensus 135 ~~tS~~~~~~lq~~~~~~~~~~~~V~~~-a~~~~~~~g~~GvV~gat~------------------~~e~~~ir~~~~~~ 195 (453)
T 3qw4_B 135 CKTSNKGSNDLQCLRVGDRYLYEAVAER-AEGPWNVNGNVGLVVGATD------------------PVALARVRARAPTL 195 (453)
T ss_dssp EECSSGGGGGTTTSEETTEEHHHHHHHH-HTTTTCTTSCEEEEECTTC------------------HHHHHHHHHHCSSC
T ss_pred EeCCCcchHHHHhcccCCCCHHHHHHHH-HHHHHhhcCCeEEEECCCC------------------HHHHHHHHHhCCCC
Confidence 4443221 1 12 2333332 22 3335788888775421 12234555555565
Q ss_pred eEEEec-CCCCHHHHHHHHHcCcCe------eEEchHHhhCCch
Q 017176 209 TFTLNG-GINTVDEVNAALRKGAHH------VMVGRAAYQNPWY 245 (376)
Q Consensus 209 pVi~nG-gI~s~~da~~~l~~Gad~------VmiGRa~l~~P~l 245 (376)
+++.=| |.. ..+..++++.|+|. +.+||+++.-++.
T Consensus 196 ~~l~PGig~q-g~tp~~a~~~g~d~~~~~~livvgR~I~~A~dp 238 (453)
T 3qw4_B 196 WFLVPGIGAQ-GGSLKASLDAGLRADGSGMLINVSRGLARAADP 238 (453)
T ss_dssp CEEECCSSTT-CCCHHHHHHHHCCTTSCCEEEEESHHHHSCSCH
T ss_pred eEEECCcCCC-CCCHHHHHHhcCCcccCCceEecChhhccCCCH
Confidence 655433 211 11344555567777 9999999976653
No 410
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=89.12 E-value=4.5 Score=36.53 Aligned_cols=82 Identities=11% Similarity=0.116 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCC-----ccHH
Q 017176 78 NLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDH-----DSYN 152 (376)
Q Consensus 78 ~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~-----~~~~ 152 (376)
.|.+..+.+++.|||.|||+-|+=. -..+.-.++++.+++. -+.|+.-.|..+. .+..
T Consensus 86 ~~~~yl~~~k~lGf~~iEiS~G~i~--------------l~~~~~~~~I~~~~~~---G~~v~~EvG~k~~~~~~~~~~~ 148 (251)
T 1qwg_A 86 KFDEFLNECEKLGFEAVEISDGSSD--------------ISLEERNNAIKRAKDN---GFMVLTEVGKKMPDKDKQLTID 148 (251)
T ss_dssp CHHHHHHHHHHHTCCEEEECCSSSC--------------CCHHHHHHHHHHHHHT---TCEEEEEECCSSHHHHTTCCHH
T ss_pred cHHHHHHHHHHcCCCEEEECCCccc--------------CCHHHHHHHHHHHHHC---CCEEeeeccccCCcccCCCCHH
Confidence 4556667788899999999866432 1234445566655543 2445555566543 3466
Q ss_pred HHHHHHHHHhhcCCccEEEEccCcc
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKA 177 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~ 177 (376)
++++.+.+-+ ++|++.|++-+|..
T Consensus 149 ~~I~~~~~~L-eAGA~~ViiEarEs 172 (251)
T 1qwg_A 149 DRIKLINFDL-DAGADYVIIEGRES 172 (251)
T ss_dssp HHHHHHHHHH-HHTCSEEEECCTTT
T ss_pred HHHHHHHHHH-HCCCcEEEEeeecc
Confidence 6776665555 58999999999863
No 411
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=89.08 E-value=8 Score=35.87 Aligned_cols=127 Identities=8% Similarity=-0.020 Sum_probs=77.5
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccH
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~ 151 (376)
-|.+.+.+-++.+.+.|.|+|=++.. +|+ +.+| ..+.-.++++.+.+.+ .+||.+-+.- .+.
T Consensus 33 iD~~~l~~lv~~li~~Gv~gi~v~Gt--------tGE-~~~L--t~~Er~~v~~~~~~~~~grvpviaGvg~-----~~t 96 (304)
T 3l21_A 33 LDTATAARLANHLVDQGCDGLVVSGT--------TGE-SPTT--TDGEKIELLRAVLEAVGDRARVIAGAGT-----YDT 96 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESST--------TTT-GGGS--CHHHHHHHHHHHHHHHTTTSEEEEECCC-----SCH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCcc--------ccc-hhhC--CHHHHHHHHHHHHHHhCCCCeEEEeCCC-----CCH
Confidence 36788899999999999999987642 344 3333 3444455555555544 4688875322 234
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEE-Ee-----cCCCCHHHHHHH
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAA 225 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi-~n-----GgI~s~~da~~~ 225 (376)
.+.++. ++.+++.|+|++.+..-. +...+ ...-++++.++.+.. ++||+ .| |--.+++.+.++
T Consensus 97 ~~ai~l-a~~a~~~Gadavlv~~P~--y~~~s-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~L 165 (304)
T 3l21_A 97 AHSIRL-AKACAAEGAHGLLVVTPY--YSKPP-------QRGLQAHFTAVADAT-ELPMLLYDIPGRSAVPIEPDTIRAL 165 (304)
T ss_dssp HHHHHH-HHHHHHHTCSEEEEECCC--SSCCC-------HHHHHHHHHHHHTSC-SSCEEEEECHHHHSSCCCHHHHHHH
T ss_pred HHHHHH-HHHHHHcCCCEEEECCCC--CCCCC-------HHHHHHHHHHHHHhc-CCCEEEEeCccccCCCCCHHHHHHH
Confidence 555654 445678999999886421 11110 011245566666654 88886 44 556677877776
Q ss_pred HH
Q 017176 226 LR 227 (376)
Q Consensus 226 l~ 227 (376)
.+
T Consensus 166 a~ 167 (304)
T 3l21_A 166 AS 167 (304)
T ss_dssp HT
T ss_pred hc
Confidence 64
No 412
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=88.97 E-value=5.6 Score=39.13 Aligned_cols=123 Identities=7% Similarity=0.024 Sum_probs=76.8
Q ss_pred CCHHHHHHHHHHHHH-CCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccH
Q 017176 74 SNLDNLAKATELANA-YNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~-~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~ 151 (376)
.+|+++++.|+.+.+ .||..+-+..|.+ +++.-.+.|++||+.. +..+.|-..-+|+ .
T Consensus 181 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~----------------~~~~Di~~v~avRea~pd~~L~vDaN~~w~----~ 240 (450)
T 3mzn_A 181 MTPEAVANLARAAYDRYGFKDFKLKGGVL----------------RGEEEADCIRALHEAFPEARLALDPNGAWK----L 240 (450)
T ss_dssp CSHHHHHHHHHHHHHHHCCSEEEEECSSS----------------CHHHHHHHHHHHHHHCTTSEEEEECTTCBC----H
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEECCCCC----------------CHHHHHHHHHHHHHhCCCCeEEEECCCCCC----H
Confidence 478999988887665 6999998865432 2333456677887765 3445554444553 4
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCccc----HHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK----YEYYYALLRDFPDLTFTLNGGINTVDEVNAALR 227 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~----~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~ 227 (376)
.+.+++ .+.+++. +.+|. . .+++-+ ++.++++.+.. ++||.+.=.+.+..++.++++
T Consensus 241 ~~A~~~-~~~L~~~-i~~iE----e------------P~~~~d~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~ 301 (450)
T 3mzn_A 241 DEAVRV-LEPIKHL-LSYAE----D------------PCGQEGGFSGRETMAEFKKRT-GLPTATNMIATDYKQLQYAVQ 301 (450)
T ss_dssp HHHHHH-HGGGGGG-CSEEE----S------------SBCCBTTBCHHHHHHHHHHHH-CCCEEESSSSSSHHHHHHHHH
T ss_pred HHHHHH-HHHhhhc-cceee----C------------CCCcccccchHHHHHHHHHhc-CCCEEeCCccCCHHHHHHHHH
Confidence 454544 3445555 55543 1 111212 45566776654 799888656788999999998
Q ss_pred -cCcCeeEE
Q 017176 228 -KGAHHVMV 235 (376)
Q Consensus 228 -~Gad~Vmi 235 (376)
..+|.+++
T Consensus 302 ~~a~di~~~ 310 (450)
T 3mzn_A 302 LNSVDIPLA 310 (450)
T ss_dssp HTCCSEEBC
T ss_pred cCCCCEEEe
Confidence 45787654
No 413
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=88.84 E-value=0.97 Score=41.93 Aligned_cols=88 Identities=13% Similarity=0.046 Sum_probs=50.7
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEE-EecCCCCHHHHHHHH-
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFT-LNGGINTVDEVNAAL- 226 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi-~nGgI~s~~da~~~l- 226 (376)
+++.+.+.+..++++.|++.|.+.|.|......+..+ +.+.+...++.. .++||| +.|+..+.+.++.+.
T Consensus 22 D~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~E-------r~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~ 94 (293)
T 1f6k_A 22 NEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEE-------KKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKY 94 (293)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHH-------HHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHH
Confidence 3444444444444328999999988765432222111 123333333332 368987 456655555544333
Q ss_pred --HcCcCeeEEchHHhhCCc
Q 017176 227 --RKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 227 --~~Gad~VmiGRa~l~~P~ 244 (376)
+.|||+||+-...+..|.
T Consensus 95 a~~~Gadavlv~~P~y~~~~ 114 (293)
T 1f6k_A 95 ATELGYDCLSAVTPFYYKFS 114 (293)
T ss_dssp HHHHTCSEEEEECCCSSCCC
T ss_pred HHhcCCCEEEECCCCCCCCC
Confidence 279999999988876664
No 414
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=88.67 E-value=8.4 Score=36.59 Aligned_cols=56 Identities=16% Similarity=0.211 Sum_probs=38.7
Q ss_pred ccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCC-CHHHHHHHHH----cCcCeeEEc-hHH
Q 017176 167 TRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGIN-TVDEVNAALR----KGAHHVMVG-RAA 239 (376)
Q Consensus 167 vd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~-s~~da~~~l~----~Gad~VmiG-Ra~ 239 (376)
+|++.|-+|+.. ++.++.++.+ .+.||+..-|.. |.+++..+.+ .|.+-|.+. ||.
T Consensus 190 vd~lkIgAr~~~---------------n~~LL~~va~--~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~ 251 (350)
T 1vr6_A 190 ADIIQIGARNAQ---------------NFRLLSKAGS--YNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGI 251 (350)
T ss_dssp CSEEEECGGGTT---------------CHHHHHHHHT--TCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred CCEEEECccccc---------------CHHHHHHHHc--cCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCC
Confidence 677777666531 1566777764 389999999997 8888776654 577656665 665
No 415
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=88.62 E-value=1.4 Score=41.42 Aligned_cols=62 Identities=11% Similarity=0.032 Sum_probs=41.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCc----cccccCCHHHHHHHHHHHhcccCccEEEE
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCF----GVSLMLDPKFVGEAMSVIAANTNVPVSVK 140 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~y----G~~l~~~~~~~~eiv~~v~~~~~~pv~vK 140 (376)
.+++...+-|+...+.|+|.|||++-+-. .|.- .-+.....+.+..+|+++++.+++|++|-
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTr-----Pga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISID 111 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATN-----PFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVD 111 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSC-----TTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCC-----CCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEe
Confidence 35777777788888889999999863222 1110 11123345567788888888778999884
No 416
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=88.60 E-value=3.3 Score=38.68 Aligned_cols=141 Identities=13% Similarity=0.241 Sum_probs=84.0
Q ss_pred CCCCEEEEecC-CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 63 EQHPIVLQIGG-SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 63 ~~~p~~vQL~g-~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
...|++++|=+ .+.+. ++.+.++||+-|.+-.+. -.++.+.+...++++...+ .++.|-.-+
T Consensus 73 ~~VPValHLDHg~~~e~----~~~ai~~GFtSVMiDgS~------------~p~eeNi~~Tk~vv~~ah~-~gvsVEaEL 135 (307)
T 3n9r_A 73 PHIPVALHLDHGTTFES----CEKAVKAGFTSVMIDASH------------HAFEENLELTSKVVKMAHN-AGVSVEAEL 135 (307)
T ss_dssp TTSCEEEEEEEECSHHH----HHHHHHHTCSEEEECCTT------------SCHHHHHHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CCCcEEEECCCCCCHHH----HHHHHHhCCCcEEEECCC------------CCHHHHHHHHHHHHHHHHH-cCCeEEEEe
Confidence 35677777643 34332 233445677777774321 1234566777777777654 244443332
Q ss_pred c-C-CCCC----------CccHHHHHHHHHHHhhcCCccEEEEccCccc--cCCCCCCCCCCCCcccHHHHHHHHhhCCC
Q 017176 142 R-I-GVDD----------HDSYNQLCDFIYKVSSLSPTRHFIIHSRKAL--LNGISPAENRTIPPLKYEYYYALLRDFPD 207 (376)
Q Consensus 142 R-~-g~~~----------~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~--~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ 207 (376)
- + |.++ ..+.++..+|+ ++.|+|.|.+.=++.. |++. .-+.++++.+.++.+ .++
T Consensus 136 G~igG~Ed~~~~~~~~~~yT~Peea~~Fv----~~TgvD~LAvaiGt~HG~Yk~~------~~p~Ld~~~L~~I~~-~~~ 204 (307)
T 3n9r_A 136 GRLMGIEDNISVDEKDAVLVNPKEAEQFV----KESQVDYLAPAIGTSHGAFKFK------GEPKLDFERLQEVKR-LTN 204 (307)
T ss_dssp SCCCCC----------CCSCCHHHHHHHH----HHHCCSEEEECSSCCSSSBCCS------SSCCCCHHHHHHHHH-HHC
T ss_pred eeeccccCCcccccccccCCCHHHHHHHH----HHHCCCEEEEecCCcccccCCC------CCCccCHHHHHHHHh-cCC
Confidence 1 1 2111 13456666654 3689999998766642 2211 114677888888854 458
Q ss_pred CeEEEecCCCCHHHHHHHHH-cCcC
Q 017176 208 LTFTLNGGINTVDEVNAALR-KGAH 231 (376)
Q Consensus 208 ipVi~nGgI~s~~da~~~l~-~Gad 231 (376)
+|++.-|+=.-+++..+.+. .|-+
T Consensus 205 ~PLVlHGgS~vp~~~~~~~~~~gg~ 229 (307)
T 3n9r_A 205 IPLVLHGASAIPDNVRKSYLDAGGD 229 (307)
T ss_dssp SCEEESSCCCCCHHHHHHHHHTTCC
T ss_pred CCeEEeCCCCcchHHHHHHHHhcCc
Confidence 99999999988888888887 6654
No 417
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=88.26 E-value=3.2 Score=36.61 Aligned_cols=93 Identities=12% Similarity=0.118 Sum_probs=59.4
Q ss_pred HHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhh
Q 017176 125 AMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD 204 (376)
Q Consensus 125 iv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~ 204 (376)
+++.+++ .|+..=+|. .+.++..+++ .. +.+.|++.|.+.-++. ...+.+.+++++
T Consensus 9 ~~~~l~~---~~~i~v~r~--~~~~~~~~~~---~a-l~~gGv~~iel~~k~~---------------~~~~~i~~l~~~ 64 (214)
T 1wbh_A 9 AESILTT---GPVVPVIVV--KKLEHAVPMA---KA-LVAGGVRVLNVTLRTE---------------CAVDAIRAIAKE 64 (214)
T ss_dssp HHHHHHS---CSEEEEECC--SSGGGHHHHH---HH-HHHTTCCEEEEESCST---------------THHHHHHHHHHH
T ss_pred HHHHHHH---CCEEEEEEC--CCHHHHHHHH---HH-HHHcCCCEEEEeCCCh---------------hHHHHHHHHHHH
Confidence 3444443 355555565 2223333333 33 3469999988864331 114567778787
Q ss_pred CCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchHHhhCCch
Q 017176 205 FPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 245 (376)
Q Consensus 205 ~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 245 (376)
++++ +++.|-+.+.+++..+++.|||+|..|- .|+.+
T Consensus 65 ~~~~-~vgagtvi~~d~~~~A~~aGAd~v~~p~---~d~~v 101 (214)
T 1wbh_A 65 VPEA-IVGAGTVLNPQQLAEVTEAGAQFAISPG---LTEPL 101 (214)
T ss_dssp CTTS-EEEEESCCSHHHHHHHHHHTCSCEEESS---CCHHH
T ss_pred CcCC-EEeeCEEEEHHHHHHHHHcCCCEEEcCC---CCHHH
Confidence 7654 5677789999999999999999999883 35544
No 418
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=88.06 E-value=2.7 Score=38.52 Aligned_cols=83 Identities=13% Similarity=0.030 Sum_probs=49.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQL 154 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~ 154 (376)
+++...+.|+.+.+.|+|.|||..-+- |.|.---+.....+.+.-+++++++ .++|++|-++- .++
T Consensus 28 ~~~~a~~~a~~m~~~GAdiIDIGgeST-----RPga~~vs~eeE~~Rv~pvi~~l~~-~~v~iSIDT~~--------~~V 93 (270)
T 4hb7_A 28 NVETAINRVKAMIDEGADIIDVGGVST-----RPGHEMVTLEEELNRVLPVVEAIVG-FDVKISVDTFR--------SEV 93 (270)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCCC-----STTCCCCCHHHHHHHHHHHHHHHTT-SSSEEEEECSC--------HHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCccC-----CCCCCCCchHHHHHHHHHHHHHhhc-CCCeEEEECCC--------HHH
Confidence 456666666777778999999975322 2221112233455677788888875 57888885332 123
Q ss_pred HHHHHHHhhcCCccEEE-EccC
Q 017176 155 CDFIYKVSSLSPTRHFI-IHSR 175 (376)
Q Consensus 155 ~~~i~~~~e~~Gvd~I~-vh~r 175 (376)
++ .+-++|++.|. |+++
T Consensus 94 a~----~al~aGa~iINDVs~g 111 (270)
T 4hb7_A 94 AE----ACLKLGVDMINDQWAG 111 (270)
T ss_dssp HH----HHHHHTCCEEEETTTT
T ss_pred HH----HHHHhccceecccccc
Confidence 22 22257888776 4443
No 419
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=87.91 E-value=5.5 Score=36.79 Aligned_cols=143 Identities=8% Similarity=-0.130 Sum_probs=70.8
Q ss_pred HHHHHHHHCCCCEEEecCCCCCcc-------ccCCC-----CccccccCC-HHHHHHHHHHHhccc--CccEEEEecCCC
Q 017176 81 KATELANAYNYDEINLNCGCPSPK-------VAGHG-----CFGVSLMLD-PKFVGEAMSVIAANT--NVPVSVKCRIGV 145 (376)
Q Consensus 81 ~aa~~~~~~G~d~IeiN~gcP~~~-------v~r~g-----~yG~~l~~~-~~~~~eiv~~v~~~~--~~pv~vKiR~g~ 145 (376)
+..+.+.+.|+.+|.+-.-++.+. ..+.. .+| +.+. .+.+.+.++..++.. +.|+.+-+..
T Consensus 27 ~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g--~~~~g~~~~~~~~~~~~~~~~~~~p~~~~i~g-- 102 (311)
T 1jub_A 27 EDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMG--LPNLGFDYYLDYVLKNQKENAQEGPIFFSIAG-- 102 (311)
T ss_dssp HHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCC--CCBSCHHHHHHHHHHHHHHTCSSSCCEEEECC--
T ss_pred HHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCC--CCCccHHHHHHHHHHHHHhcCCCCCEEEEcCC--
Confidence 334556778888887655443321 11100 012 1111 344444444443334 6788776652
Q ss_pred CCCccHHHHHHHHHHHhhcCCcc-EEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE--ecCCCCHHHH
Q 017176 146 DDHDSYNQLCDFIYKVSSLSPTR-HFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL--NGGINTVDEV 222 (376)
Q Consensus 146 ~~~~~~~~~~~~i~~~~e~~Gvd-~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~--nGgI~s~~da 222 (376)
.+.++..+. ++.++++|+| +|.+|-..+...|. .....-+...++.+.++++. .++||+. +.++ +.+++
T Consensus 103 ---~~~~~~~~~-a~~~~~~g~d~~iein~~~P~~~g~--~~~g~~~e~~~~iv~~vr~~-~~~Pv~vKi~~~~-~~~~~ 174 (311)
T 1jub_A 103 ---MSAAENIAM-LKKIQESDFSGITELNLSCPNVPGE--PQLAYDFEATEKLLKEVFTF-FTKPLGVKLPPYF-DLVHF 174 (311)
T ss_dssp ---SSHHHHHHH-HHHHHHSCCCSEEEEESCCCCSSSC--CCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCC-SHHHH
T ss_pred ---CCHHHHHHH-HHHHHhcCCCeEEEEeccCCCCCCc--ccccCCHHHHHHHHHHHHHh-cCCCEEEEECCCC-CHHHH
Confidence 223344443 3445679999 99998654322221 11000011113445555444 4789875 4554 55554
Q ss_pred H---HHHH-cCcCeeEE
Q 017176 223 N---AALR-KGAHHVMV 235 (376)
Q Consensus 223 ~---~~l~-~Gad~Vmi 235 (376)
. +.++ .|+|+|.+
T Consensus 175 ~~~a~~~~~~G~d~i~v 191 (311)
T 1jub_A 175 DIMAEILNQFPLTYVNS 191 (311)
T ss_dssp HHHHHHHTTSCCCEEEE
T ss_pred HHHHHHHHHcCCcEEEe
Confidence 3 3333 79999876
No 420
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=87.82 E-value=2.2 Score=40.86 Aligned_cols=42 Identities=17% Similarity=0.287 Sum_probs=35.6
Q ss_pred cccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEE
Q 017176 192 PLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 235 (376)
Q Consensus 192 ~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~Vmi 235 (376)
...|+.+..+++.. ++||+.-| |.+++++..+.+.|+|+|.+
T Consensus 215 ~~~~~~i~~lr~~~-~~PvivK~-v~~~e~a~~a~~~Gad~I~v 256 (368)
T 2nli_A 215 KISPRDIEEIAGHS-GLPVFVKG-IQHPEDADMAIKRGASGIWV 256 (368)
T ss_dssp BCCHHHHHHHHHHS-SSCEEEEE-ECSHHHHHHHHHTTCSEEEE
T ss_pred hhhHHHHHHHHHHc-CCCEEEEc-CCCHHHHHHHHHcCCCEEEE
Confidence 45688888888765 89998764 68999999999999999998
No 421
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=87.79 E-value=1.6 Score=40.78 Aligned_cols=87 Identities=16% Similarity=0.084 Sum_probs=50.7
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEE-EecCCCCHHHHHHHH-
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFT-LNGGINTVDEVNAAL- 226 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi-~nGgI~s~~da~~~l- 226 (376)
+++.+.+.+..++ +.|++.|.+.|.|......+.. -+.+.+...++.. .++||| +.|+..+.+.++.+.
T Consensus 35 D~~~l~~lv~~li-~~Gv~gl~v~GttGE~~~Ls~~-------Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~ 106 (304)
T 3cpr_A 35 DIAAGREVAAYLV-DKGLDSLVLAGTTGESPTTTAA-------EKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEA 106 (304)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEEESSTTTTTTTSCHH-------HHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHH
Confidence 3444444444443 5899999999877543222211 1123333334332 268987 556665555544333
Q ss_pred --HcCcCeeEEchHHhhCCc
Q 017176 227 --RKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 227 --~~Gad~VmiGRa~l~~P~ 244 (376)
+.|||+||+-...+..|.
T Consensus 107 A~~~Gadavlv~~P~y~~~~ 126 (304)
T 3cpr_A 107 AASAGADGLLVVTPYYSKPS 126 (304)
T ss_dssp HHHTTCSEEEEECCCSSCCC
T ss_pred HHhcCCCEEEECCCCCCCCC
Confidence 379999999988776664
No 422
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=87.68 E-value=17 Score=33.54 Aligned_cols=152 Identities=15% Similarity=0.100 Sum_probs=92.0
Q ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 62 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 62 ~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
....|+++++.+++.++-.+.++.++++|+|++-+- .|.-. + ...+-+.+-.++|.+++++|+.+--
T Consensus 83 ~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~--~P~y~--~---------~~~~~l~~~f~~ia~a~~lPiilYn 149 (304)
T 3cpr_A 83 GDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVV--TPYYS--K---------PSQEGLLAHFGAIAAATEVPICLYD 149 (304)
T ss_dssp TTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEE--CCCSS--C---------CCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEEC--CCCCC--C---------CCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 456799999999999999999999999999999885 35421 1 1346677788888888889998754
Q ss_pred ---cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCC
Q 017176 142 ---RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINT 218 (376)
Q Consensus 142 ---R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s 218 (376)
|.|.+- +.+ + +.++++.-.+-.|--..+ +...+.++++.. +..| .+|+=
T Consensus 150 ~P~~tg~~l--~~~-~---~~~La~~pnIvgiKdssg------------------d~~~~~~~~~~~-~f~v-~~G~d-- 201 (304)
T 3cpr_A 150 IPGRSGIPI--ESD-T---MRRLSELPTILAVXDAKG------------------DLVAATSLIKET-GLAW-YSGDD-- 201 (304)
T ss_dssp CHHHHSSCC--CHH-H---HHHHTTSTTEEEEEECSC------------------CHHHHHHHHHHH-CCEE-EECSG--
T ss_pred CccccCcCC--CHH-H---HHHHHcCCCEEEEecCCC------------------CHHHHHHHHHhc-CEEE-EECcH--
Confidence 334332 222 2 233332222333322211 134444544433 4433 55542
Q ss_pred HHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhC
Q 017176 219 VDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYG 256 (376)
Q Consensus 219 ~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g 256 (376)
+.+...+..|++|+..+.+-+ -|..+.+.++....|
T Consensus 202 -~~~l~~l~~G~~G~is~~an~-~P~~~~~l~~a~~~G 237 (304)
T 3cpr_A 202 -PLNLVWLALGGSGFISVIGHA-APTALRELYTSFEEG 237 (304)
T ss_dssp -GGHHHHHHTTCCEEEESGGGT-CHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHCCCCEEEecHHHh-hHHHHHHHHHHHHCC
Confidence 234556678999999988764 566654444433345
No 423
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=87.68 E-value=18 Score=33.67 Aligned_cols=153 Identities=13% Similarity=0.076 Sum_probs=94.6
Q ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 62 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 62 ~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
....|+++...+++.++-.+.++.++++|+|++-+- .|.-. + -..+-+.+-.++|.+++++||.+--
T Consensus 90 ~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~--~P~y~--~---------~s~~~l~~~f~~va~a~~lPiilYn 156 (314)
T 3qze_A 90 KGRIPVIAGTGANSTREAVALTEAAKSGGADACLLV--TPYYN--K---------PTQEGMYQHFRHIAEAVAIPQILYN 156 (314)
T ss_dssp TTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE--CCCSS--C---------CCHHHHHHHHHHHHHHSCSCEEEEE
T ss_pred CCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEc--CCCCC--C---------CCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 456799999999999999999999999999999884 45421 1 1346677888888888899998864
Q ss_pred c---CCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCC-CCeEEEecCCC
Q 017176 142 R---IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGIN 217 (376)
Q Consensus 142 R---~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi~nGgI~ 217 (376)
- .|.+- +.+ + +.++++--.+-.|--..+ ++..+.++++..+ +.. +.+|+=
T Consensus 157 ~P~~tg~~l--~~~-~---~~~La~~pnIvgiKdssg------------------d~~~~~~~~~~~~~~f~-v~~G~d- 210 (314)
T 3qze_A 157 VPGRTSCDM--LPE-T---VERLSKVPNIIGIKEATG------------------DLQRAKEVIERVGKDFL-VYSGDD- 210 (314)
T ss_dssp CHHHHSCCC--CHH-H---HHHHHTSTTEEEEEECSC------------------CHHHHHHHHHHSCTTSE-EEESCG-
T ss_pred CccccCCCC--CHH-H---HHHHhcCCCEEEEEcCCC------------------CHHHHHHHHHHcCCCeE-EEecCh-
Confidence 2 23332 222 2 233333223333332211 1445556655543 344 456652
Q ss_pred CHHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhC
Q 017176 218 TVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYG 256 (376)
Q Consensus 218 s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g 256 (376)
+.+...+..|++|++.+.+-+ -|..+.+.++....|
T Consensus 211 --~~~l~~l~~Ga~G~is~~an~-~P~~~~~l~~a~~~G 246 (314)
T 3qze_A 211 --ATAVELMLLGGKGNISVTANV-APRAMSDLCAAAMRG 246 (314)
T ss_dssp --GGHHHHHHTTCCEEEESGGGT-CHHHHHHHHHHHHTT
T ss_pred --HHHHHHHHCCCCEEEecHHhh-hHHHHHHHHHHHHCC
Confidence 225566778999999887754 466654444443345
No 424
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=87.66 E-value=0.91 Score=41.42 Aligned_cols=147 Identities=18% Similarity=0.154 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHCCCCEEEecCC--------------------------------------------C--CCccccC-CCC
Q 017176 78 NLAKATELANAYNYDEINLNCG--------------------------------------------C--PSPKVAG-HGC 110 (376)
Q Consensus 78 ~~~~aa~~~~~~G~d~IeiN~g--------------------------------------------c--P~~~v~r-~g~ 110 (376)
+.+++|..++++|+|+|-+|.- | |-..-.. +++
T Consensus 54 Dpv~aA~~ae~aGAdGITvHlReDrRHI~d~Dv~~L~~~i~t~lNlEma~t~emi~ial~~kP~~vtLVPEkreE~TTeg 133 (278)
T 3gk0_A 54 DPVRAALAAEDAGADAITLHLREDRRHIVDADVRTLRPRVKTRMNLECAVTPEMLDIACEIRPHDACLVPEKRSELTTEG 133 (278)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCTTCSSSCHHHHHHHHHHCSSCEEEEECSSHHHHHHHHHHCCSEEEECCCSGGGBCSSS
T ss_pred CHHHHHHHHHHcCCCEEEeccCCCcccCCHHHHHHHHHHcCCCEEeecCCCHHHHHHHHHcCCCEEEECCCCCCCcCCCc
Confidence 4578999999999999999753 1 2111111 333
Q ss_pred ccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCC
Q 017176 111 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTI 190 (376)
Q Consensus 111 yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~ 190 (376)
|-....+.+.+.++++.+++ .++.|++-+-+ +.+. ++ .+.+.|+|.|.+|.+.-.... ...+
T Consensus 134 -GlDv~~~~~~L~~~i~~L~~-~GIrVSLFIDp------d~~q-I~----aA~~~GAd~IELhTG~YA~a~-~~~~---- 195 (278)
T 3gk0_A 134 -GLDVVGHFDAVRAACKQLAD-AGVRVSLFIDP------DEAQ-IR----AAHETGAPVIELHTGRYADAH-DAAE---- 195 (278)
T ss_dssp -SBCTTTTHHHHHHHHHHHHH-TTCEEEEEECS------CHHH-HH----HHHHHTCSEEEECCHHHHTCS-SHHH----
T ss_pred -chhhhccHHHHHHHHHHHHH-CCCEEEEEeCC------CHHH-HH----HHHHhCcCEEEEecchhhccC-Cchh----
Confidence 66678899999999999876 47777775532 1222 22 223689999999976321000 0000
Q ss_pred CcccHHHHH---HHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcCeeEEchHHhhCCc
Q 017176 191 PPLKYEYYY---ALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 191 ~~~~~~~v~---~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad~VmiGRa~l~~P~ 244 (376)
...-++.+. +...+. ++-|=+--|+ +.+.+..+.+ .+..=|-||.+++.+--
T Consensus 196 ~~~el~rl~~aA~~A~~l-GL~VnAGHGL-~y~Nv~~ia~ip~i~ElnIGHaiIa~Al 251 (278)
T 3gk0_A 196 QQREFERIATGVDAGIAL-GLKVNAGHGL-HYTNVQAIAALPGIAELNIGHAIVAHAV 251 (278)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCEEEECTTC-CTTTHHHHHTCTTEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc-CCEEecCCCC-CHHHHHHHHhCCCCeEEecCHHHHHHHH
Confidence 000022222 222232 6767666666 4555554444 67888999999887653
No 425
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=87.58 E-value=12 Score=36.08 Aligned_cols=140 Identities=13% Similarity=0.115 Sum_probs=82.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccC-------CCCccccc-------cCCHHHHHHHHHHHhcccCccEEEE
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAG-------HGCFGVSL-------MLDPKFVGEAMSVIAANTNVPVSVK 140 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r-------~g~yG~~l-------~~~~~~~~eiv~~v~~~~~~pv~vK 140 (376)
+.+...+.++.++++|+|+|-...-.|-..+.. .+.+|..+ .-..+.. +.+.+.++..++++..-
T Consensus 42 sle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~-~~L~~~~~~~Gi~~~st 120 (385)
T 1vli_A 42 KLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWI-LPLLDYCREKQVIFLST 120 (385)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGH-HHHHHHHHHTTCEEECB
T ss_pred cHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHH-HHHHHHHHHcCCcEEEc
Confidence 567777778888899999999976555331111 11122211 1122233 34444455567776431
Q ss_pred ecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHH
Q 017176 141 CRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVD 220 (376)
Q Consensus 141 iR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~ 220 (376)
-||. +.+++ +++.|++.+-|..|.-. ++.++.++.+. +.|||..-|..|.+
T Consensus 121 ---pfD~-----~svd~----l~~~~vd~~KIgS~~~~---------------N~pLL~~va~~--gKPViLStGmaTl~ 171 (385)
T 1vli_A 121 ---VCDE-----GSADL----LQSTSPSAFKIASYEIN---------------HLPLLKYVARL--NRPMIFSTAGAEIS 171 (385)
T ss_dssp ---CCSH-----HHHHH----HHTTCCSCEEECGGGTT---------------CHHHHHHHHTT--CSCEEEECTTCCHH
T ss_pred ---cCCH-----HHHHH----HHhcCCCEEEECccccc---------------CHHHHHHHHhc--CCeEEEECCCCCHH
Confidence 1221 12222 34689999999877531 27778777763 89999999999999
Q ss_pred HHHHHHH----cCcCeeEEchHHhhCCc
Q 017176 221 EVNAALR----KGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 221 da~~~l~----~Gad~VmiGRa~l~~P~ 244 (376)
++..+++ .|++-|.+--+.-.-|.
T Consensus 172 Ei~~Ave~i~~~Gn~~iiLlhc~s~YPt 199 (385)
T 1vli_A 172 DVHEAWRTIRAEGNNQIAIMHCVAKYPA 199 (385)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEECSSSSC
T ss_pred HHHHHHHHHHHCCCCcEEEEeccCCCCC
Confidence 9887765 57755555333333343
No 426
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=87.43 E-value=2.1 Score=40.06 Aligned_cols=82 Identities=7% Similarity=-0.061 Sum_probs=47.8
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE-ecCCCCHHHHHHHH--
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL-NGGINTVDEVNAAL-- 226 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~-nGgI~s~~da~~~l-- 226 (376)
+++.+.+.+..++ +.|++.|.+-|.|......+.. -+.+.+..+++...++|||+ .|+..+.+.++.+.
T Consensus 27 D~~~l~~lv~~li-~~Gv~Gl~v~GtTGE~~~Lt~~-------Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A 98 (313)
T 3dz1_A 27 DDVSIDRLTDFYA-EVGCEGVTVLGILGEAPKLDAA-------EAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLS 98 (313)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEESTGGGTGGGSCHH-------HHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-HCCCCEEEeCccCcChhhCCHH-------HHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHH
Confidence 3444444444443 6899999998876543222211 11334444455444799985 45555555444332
Q ss_pred -HcCcCeeEEchHH
Q 017176 227 -RKGAHHVMVGRAA 239 (376)
Q Consensus 227 -~~Gad~VmiGRa~ 239 (376)
+.|||+||+-...
T Consensus 99 ~~~Gadavlv~~P~ 112 (313)
T 3dz1_A 99 MDAGAAGVMIAPPP 112 (313)
T ss_dssp HHHTCSEEEECCCT
T ss_pred HHcCCCEEEECCCC
Confidence 3799999997665
No 427
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=87.39 E-value=1.5 Score=40.55 Aligned_cols=61 Identities=21% Similarity=0.121 Sum_probs=42.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEE
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVK 140 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vK 140 (376)
+++...+.|+...+.|+|.||||+-+. |.|.---+.....+.+..+++++++.+++|++|-
T Consensus 36 ~~~~a~~~a~~~v~~GAdiIDIGgest-----rPga~~v~~~eE~~rv~pvi~~l~~~~~~piSID 96 (282)
T 1aj0_A 36 SLIDAVKHANLMINAGATIIDVGGEST-----RPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVD 96 (282)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSCC-----STTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcC-----CCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEe
Confidence 467777777777788999999997332 1111011223456778888888888778899884
No 428
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=87.31 E-value=6.7 Score=36.25 Aligned_cols=112 Identities=13% Similarity=0.168 Sum_probs=73.8
Q ss_pred ccCCHHHHHHHHHHHhcccCccEEEEec-C-CCCC--------CccHHHHHHHHHHHhhcCCccEEEEccCccc--cCCC
Q 017176 115 LMLDPKFVGEAMSVIAANTNVPVSVKCR-I-GVDD--------HDSYNQLCDFIYKVSSLSPTRHFIIHSRKAL--LNGI 182 (376)
Q Consensus 115 l~~~~~~~~eiv~~v~~~~~~pv~vKiR-~-g~~~--------~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~--~~g~ 182 (376)
++.+.+...++++...+ .++.|-.-+- + |-++ ..+.++..+|+ ++.|+|.|.+.=++.. |.|
T Consensus 116 ~eeNi~~Tk~vv~~ah~-~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv----~~TgvD~LAvaiGt~HG~Y~~- 189 (288)
T 3q94_A 116 FEENVETTKKVVEYAHA-RNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLV----EATGIDCLAPALGSVHGPYKG- 189 (288)
T ss_dssp HHHHHHHHHHHHHHHHT-TTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHH----HHHCCSEEEECSSCBSSCCSS-
T ss_pred HHHHHHHHHHHHHHHHH-cCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHH----HHHCCCEEEEEcCcccCCcCC-
Confidence 34566777777777654 3444433321 1 2221 13466666654 4689999998766642 222
Q ss_pred CCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCH-HHHHHHHHcCcCeeEEchHHh
Q 017176 183 SPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV-DEVNAALRKGAHHVMVGRAAY 240 (376)
Q Consensus 183 ~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~-~da~~~l~~Gad~VmiGRa~l 240 (376)
-+.++++.+.++.+.. ++|++.-||=-.+ +++.++++.|+-=|=|++.+.
T Consensus 190 -------~p~Ld~~~L~~I~~~v-~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Tdl~ 240 (288)
T 3q94_A 190 -------EPNLGFAEMEQVRDFT-GVPLVLHGGTGIPTADIEKAISLGTSKINVNTENQ 240 (288)
T ss_dssp -------SCCCCHHHHHHHHHHH-CSCEEECCCTTCCHHHHHHHHHTTEEEEEECHHHH
T ss_pred -------CCccCHHHHHHHHHhc-CCCEEEeCCCCCCHHHHHHHHHcCCeEEEEChHHH
Confidence 1567789998888765 7999988876555 568888899998888988763
No 429
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=87.28 E-value=1.5 Score=40.96 Aligned_cols=87 Identities=11% Similarity=-0.002 Sum_probs=51.2
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEE-EecCCCCHHHHHHHH-
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFT-LNGGINTVDEVNAAL- 226 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi-~nGgI~s~~da~~~l- 226 (376)
+++.+.+.+..++ +.|++.|.+-|.|......+..+ +.+.+...++.. .++||| +.|+..+.+.++.+.
T Consensus 30 D~~~l~~lv~~li-~~Gv~Gl~v~GtTGE~~~Ls~eE-------r~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~ 101 (303)
T 2wkj_A 30 DKASLRRLVQFNI-QQGIDGLYVGGSTGEAFVQSLSE-------REQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAAS 101 (303)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECeeccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHH
Confidence 3444444444444 58999999988765432222111 123333334332 368987 566666555544333
Q ss_pred --HcCcCeeEEchHHhhCCc
Q 017176 227 --RKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 227 --~~Gad~VmiGRa~l~~P~ 244 (376)
+.|||+||+-...+..|.
T Consensus 102 A~~~Gadavlv~~P~y~~~s 121 (303)
T 2wkj_A 102 AKRYGFDAVSAVTPFYYPFS 121 (303)
T ss_dssp HHHHTCSEEEEECCCSSCCC
T ss_pred HHhCCCCEEEecCCCCCCCC
Confidence 379999999888876663
No 430
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=87.20 E-value=4 Score=35.73 Aligned_cols=128 Identities=15% Similarity=0.115 Sum_probs=71.4
Q ss_pred EEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcc-cCccE--EEEecC
Q 017176 67 IVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN-TNVPV--SVKCRI 143 (376)
Q Consensus 67 ~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~-~~~pv--~vKiR~ 143 (376)
+++-+=-.+.++..+.++.+ +.|.|.+|+++ |. +.. +| .++++++|+. .+.|+ .+|+-
T Consensus 9 lilalD~~~~~~~~~~~~~~-~~~vd~ie~g~--~~--~~~---~G----------~~~i~~lr~~~~~~~i~ld~~l~- 69 (218)
T 3jr2_A 9 IQIALDQTNLTDAVAVASNV-ASYVDVIEVGT--IL--AFA---EG----------MKAVSTLRHNHPNHILVCDMKTT- 69 (218)
T ss_dssp EEEEECCSSHHHHHHHHHHH-GGGCSEEEECH--HH--HHH---HT----------THHHHHHHHHCTTSEEEEEEEEC-
T ss_pred eEEEeCCCCHHHHHHHHHHh-cCCceEEEeCc--HH--HHh---cC----------HHHHHHHHHhCCCCcEEEEEeec-
Confidence 45544445666666666665 44799999874 22 111 23 2567777766 34444 55543
Q ss_pred CCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE-ecCCCCHHHH
Q 017176 144 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL-NGGINTVDEV 222 (376)
Q Consensus 144 g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~-nGgI~s~~da 222 (376)
+... ..+ +.+.++|+|.|++|.-... ..-.+.+..+.+ . +++.+. .=++.|++++
T Consensus 70 --d~p~---~~~----~~~~~aGad~i~vh~~~~~-------------~~~~~~~~~~~~-~-g~~~~~d~l~~~T~~~~ 125 (218)
T 3jr2_A 70 --DGGA---ILS----RMAFEAGADWITVSAAAHI-------------ATIAACKKVADE-L-NGEIQIEIYGNWTMQDA 125 (218)
T ss_dssp --SCHH---HHH----HHHHHHTCSEEEEETTSCH-------------HHHHHHHHHHHH-H-TCEEEEECCSSCCHHHH
T ss_pred --ccHH---HHH----HHHHhcCCCEEEEecCCCH-------------HHHHHHHHHHHH-h-CCccceeeeecCCHHHH
Confidence 2211 122 2234689999999974310 000122333333 3 555543 3334578888
Q ss_pred HHHHHcCcCeeEEch
Q 017176 223 NAALRKGAHHVMVGR 237 (376)
Q Consensus 223 ~~~l~~Gad~VmiGR 237 (376)
.++.+.|+|.+.+..
T Consensus 126 ~~~~~~g~d~v~~~~ 140 (218)
T 3jr2_A 126 KAWVDLGITQAIYHR 140 (218)
T ss_dssp HHHHHTTCCEEEEEC
T ss_pred HHHHHcCccceeeee
Confidence 888888999877643
No 431
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=87.12 E-value=1.6 Score=39.90 Aligned_cols=81 Identities=12% Similarity=0.195 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCC-----ccHH
Q 017176 78 NLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDH-----DSYN 152 (376)
Q Consensus 78 ~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~-----~~~~ 152 (376)
.|.+..+.+++.|||.|||+-|+=. -..+.-.++++.+++ . +.|+.-.|..+. .+..
T Consensus 111 ~~~~yl~~~k~lGF~~IEISdGti~--------------l~~~~~~~lI~~a~~---~-f~Vl~EvG~K~~~~~~~~~~~ 172 (276)
T 1u83_A 111 KVNEFHRYCTYFGCEYIEISNGTLP--------------MTNKEKAAYIADFSD---E-FLVLSEVGSKDAELASRQSSE 172 (276)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSSSC--------------CCHHHHHHHHHHHTT---T-SEEEEECSCCC------CCST
T ss_pred cHHHHHHHHHHcCCCEEEECCCccc--------------CCHHHHHHHHHHHHh---h-cEEeeeccccCccccCCCCHH
Confidence 4556667888999999999866432 123344455554443 3 677777776543 2344
Q ss_pred HHHHHHHHHhhcCCccEEEEccCcc
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKA 177 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~ 177 (376)
++++.+.+-+ ++|++.|++-+|..
T Consensus 173 ~~I~~~~~dL-eAGA~~ViiEaRES 196 (276)
T 1u83_A 173 EWLEYIVEDM-EAGAEKVITEARES 196 (276)
T ss_dssp HHHHHHHHHH-HHTEEEEEEC----
T ss_pred HHHHHHHHHH-HCCCcEEEEeeecc
Confidence 5566555545 58999999999874
No 432
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=87.05 E-value=1.5 Score=40.82 Aligned_cols=87 Identities=15% Similarity=0.155 Sum_probs=49.9
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEEE-ecCCCCHHHHHHHH-
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTL-NGGINTVDEVNAAL- 226 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~-nGgI~s~~da~~~l- 226 (376)
+++.+.+.+..++ +.|++.|.+-|.|......+.. -+.+.+...++.. .++|||+ .|+..+.+.++.+.
T Consensus 34 D~~~l~~lv~~li-~~Gv~gi~v~GttGE~~~Lt~~-------Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~ 105 (304)
T 3l21_A 34 DTATAARLANHLV-DQGCDGLVVSGTTGESPTTTDG-------EKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKA 105 (304)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEESSTTTTGGGSCHH-------HHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEeCccccchhhCCHH-------HHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHH
Confidence 3444444444444 5899999998877543222211 1123333333332 3689885 45555544443332
Q ss_pred --HcCcCeeEEchHHhhCCc
Q 017176 227 --RKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 227 --~~Gad~VmiGRa~l~~P~ 244 (376)
+.|||+|++-...+..|.
T Consensus 106 a~~~Gadavlv~~P~y~~~s 125 (304)
T 3l21_A 106 CAAEGAHGLLVVTPYYSKPP 125 (304)
T ss_dssp HHHHTCSEEEEECCCSSCCC
T ss_pred HHHcCCCEEEECCCCCCCCC
Confidence 279999999888776663
No 433
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=87.04 E-value=17 Score=33.52 Aligned_cols=193 Identities=8% Similarity=-0.018 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCcEEEecceeecccccccchhhhhhccCCCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCC
Q 017176 22 NHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCP 101 (376)
Q Consensus 22 ~~~r~~~~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP 101 (376)
..+.....+.| +..+-..+.........-......+..-.....+-++..-.+.+++..+.+ +|++.|.+-.++-
T Consensus 33 ~~i~~~L~~~G-v~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~~~~i~~a~~----aG~~~v~i~~~~s 107 (302)
T 2ftp_A 33 IRLVDDLSAAG-LDYIEVGSFVSPKWVPQMAGSAEVFAGIRQRPGVTYAALAPNLKGFEAALE----SGVKEVAVFAAAS 107 (302)
T ss_dssp HHHHHHHHHTT-CSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTSEEEEECCSHHHHHHHHH----TTCCEEEEEEESC
T ss_pred HHHHHHHHHcC-cCEEEECCCcCccccccccCHHHHHHHhhhcCCCEEEEEeCCHHHHHHHHh----CCcCEEEEEEecC
Q ss_pred CccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCC----ccHHHHHHHHHHHhhcCCccEEEEccCcc
Q 017176 102 SPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDH----DSYNQLCDFIYKVSSLSPTRHFIIHSRKA 177 (376)
Q Consensus 102 ~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~----~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~ 177 (376)
...+.++ .+-+.....+.+.++++..++. ++.|..-+..-+... .+.+++.+++..+.+ .|+|.|.+.--..
T Consensus 108 ~~~~~~~--~~~s~ee~l~~~~~~v~~a~~~-G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~-~G~d~i~l~DT~G 183 (302)
T 2ftp_A 108 EAFSQRN--INCSIKDSLERFVPVLEAARQH-QVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQ-MGCYEVSLGDTIG 183 (302)
T ss_dssp HHHHHHH--HSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHH-TTCSEEEEEESSS
T ss_pred HHHHHHH--hCCCHHHHHHHHHHHHHHHHHC-CCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHH-cCCCEEEEeCCCC
Q ss_pred ccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEec--CCCCH-HHHHHHHHcCcCee
Q 017176 178 LLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG--GINTV-DEVNAALRKGAHHV 233 (376)
Q Consensus 178 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nG--gI~s~-~da~~~l~~Gad~V 233 (376)
. ..|....+.+.++++.++++|+-.-| +--.. ..+..+++.||+-|
T Consensus 184 ~----------~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~v 232 (302)
T 2ftp_A 184 V----------GTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVF 232 (302)
T ss_dssp C----------CCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEE
T ss_pred C----------cCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEE
No 434
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=87.03 E-value=6.4 Score=36.62 Aligned_cols=114 Identities=9% Similarity=0.035 Sum_probs=70.9
Q ss_pred CChHHHHHHH---HHhCCCcEEEecceeecccccccchhhhhh----ccCCCCCCEEEEecCCCHHHHHHHHHHHHHCCC
Q 017176 19 WTDNHYRTLA---RLISKHAWLYTEMLAAETIIYQQGNLDRFL----AFSPEQHPIVLQIGGSNLDNLAKATELANAYNY 91 (376)
Q Consensus 19 ~td~~~r~~~---~~~Gg~gl~~te~v~~~~~~~~~~~~~~~~----~~~~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~ 91 (376)
+....++.++ .+.|-.|+++.+.+.--..+...++ .+++ +......|+++.+.+++.++-.+.++.++++|+
T Consensus 26 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er-~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Ga 104 (309)
T 3fkr_A 26 LDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDER-DVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGA 104 (309)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHH-HHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHH-HHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCC
Confidence 3445666654 2445346666554332222221111 1222 223456799999999999999999999999999
Q ss_pred CEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecC
Q 017176 92 DEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI 143 (376)
Q Consensus 92 d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~ 143 (376)
|++-+- .|.. +...--..+-+.+-.++|.+++++|+.+---+
T Consensus 105 davlv~--~Pyy--------~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P 146 (309)
T 3fkr_A 105 AMVMAM--PPYH--------GATFRVPEAQIFEFYARVSDAIAIPIMVQDAP 146 (309)
T ss_dssp SEEEEC--CSCB--------TTTBCCCHHHHHHHHHHHHHHCSSCEEEEECG
T ss_pred CEEEEc--CCCC--------ccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 999884 3542 11001245677888888888889999876443
No 435
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=87.01 E-value=1.4 Score=41.49 Aligned_cols=61 Identities=13% Similarity=0.115 Sum_probs=41.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEE
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVK 140 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vK 140 (376)
+++...+.|+...+.|+|.|||++-+- |.|.=.-+.....+.+..+|+++++..++|++|-
T Consensus 31 ~~~~a~~~a~~~v~~GAdIIDIGgeST-----rPGa~~v~~~eE~~Rv~pvI~~l~~~~~vpiSID 91 (314)
T 2vef_A 31 ALEQALQQARKLIAEGASMLDIGGEST-----RPGSSYVEIEEEIQRVVPVIKAIRKESDVLISID 91 (314)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcC-----CCCCCCCCHHHHHHHHHHHHHHHHhhCCceEEEe
Confidence 456666677777788999999997432 1111012233566788888899988778899884
No 436
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=86.98 E-value=1.7 Score=40.24 Aligned_cols=85 Identities=5% Similarity=-0.005 Sum_probs=50.3
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCC-CCeEE-EecCCCCHHHHHHHH-
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFT-LNGGINTVDEVNAAL- 226 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi-~nGgI~s~~da~~~l- 226 (376)
+++.+.+.+..++ +.|++.|.+.|.|......+.. -+.+.+...++... ++||| +.|+..+.+.++.+.
T Consensus 22 D~~~l~~lv~~li-~~Gv~gl~~~GttGE~~~Ls~~-------Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~ 93 (294)
T 3b4u_A 22 DIDAMIAHARRCL-SNGCDSVTLFGTTGEGCSVGSR-------ERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAE 93 (294)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEESSTTTTGGGSCHH-------HHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHH
Confidence 3444444444444 5899999999877543222211 11234444444432 58887 566665555544333
Q ss_pred --HcCcCeeEEchHHhhC
Q 017176 227 --RKGAHHVMVGRAAYQN 242 (376)
Q Consensus 227 --~~Gad~VmiGRa~l~~ 242 (376)
+.|||+||+-...+..
T Consensus 94 A~~~Gadavlv~~P~y~~ 111 (294)
T 3b4u_A 94 ALNAGARNILLAPPSYFK 111 (294)
T ss_dssp HHHTTCSEEEECCCCSSC
T ss_pred HHhcCCCEEEEcCCcCCC
Confidence 3799999998887766
No 437
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=86.96 E-value=1.3 Score=40.80 Aligned_cols=85 Identities=13% Similarity=0.055 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHH---H
Q 017176 151 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL---R 227 (376)
Q Consensus 151 ~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l---~ 227 (376)
++.+.+.+..++ +.|++.|.+.|.|......+.. -+.+.+...++...+ -|.+.|+..+.+.++.+. +
T Consensus 18 ~~~l~~lv~~li-~~Gv~gl~v~GttGE~~~Ls~~-------Er~~v~~~~~~~~~g-vi~Gvg~~~t~~ai~la~~A~~ 88 (286)
T 2r91_A 18 PELFANHVKNIT-SKGVDVVFVAGTTGLGPALSLQ-------EKMELTDAATSAARR-VIVQVASLNADEAIALAKYAES 88 (286)
T ss_dssp HHHHHHHHHHHH-HTTCCEEEETSTTTTGGGSCHH-------HHHHHHHHHHHHCSS-EEEECCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HCCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHhCC-EEEeeCCCCHHHHHHHHHHHHh
Confidence 333444444333 5899999999877543222211 113344555555445 456778877776655443 3
Q ss_pred cCcCeeEEchHHhhC-Cc
Q 017176 228 KGAHHVMVGRAAYQN-PW 244 (376)
Q Consensus 228 ~Gad~VmiGRa~l~~-P~ 244 (376)
.|||+||+-...+.. |.
T Consensus 89 ~Gadavlv~~P~y~~~~s 106 (286)
T 2r91_A 89 RGAEAVASLPPYYFPRLS 106 (286)
T ss_dssp TTCSEEEECCSCSSTTCC
T ss_pred cCCCEEEEcCCcCCCCCC
Confidence 799999999888766 53
No 438
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=86.92 E-value=1.5 Score=40.64 Aligned_cols=86 Identities=15% Similarity=0.049 Sum_probs=51.9
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH--
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-- 227 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-- 227 (376)
+++.+.+.+..+. +.|++.|.+.|.|......+.. -+.+.+...++...+ -|.+.|+..+.+.++.+..
T Consensus 18 D~~~l~~lv~~li-~~Gv~gl~~~GttGE~~~Ls~e-------Er~~v~~~~~~~~~g-viaGvg~~~t~~ai~la~~A~ 88 (293)
T 1w3i_A 18 DKEKLKIHAENLI-RKGIDKLFVNGTTGLGPSLSPE-------EKLENLKAVYDVTNK-IIFQVGGLNLDDAIRLAKLSK 88 (293)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEEESSTTTTGGGSCHH-------HHHHHHHHHHTTCSC-EEEECCCSCHHHHHHHHHHGG
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHcCC-EEEecCCCCHHHHHHHHHHHH
Confidence 3444444444443 5899999998877543222211 113344444544434 4567777777666654443
Q ss_pred -cCcCeeEEchHHhhC-Cc
Q 017176 228 -KGAHHVMVGRAAYQN-PW 244 (376)
Q Consensus 228 -~Gad~VmiGRa~l~~-P~ 244 (376)
.|||+||+-...+.. |.
T Consensus 89 ~~Gadavlv~~P~y~~~~s 107 (293)
T 1w3i_A 89 DFDIVGIASYAPYYYPRMS 107 (293)
T ss_dssp GSCCSEEEEECCCSCSSCC
T ss_pred hcCCCEEEEcCCCCCCCCC
Confidence 799999999888776 53
No 439
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=86.87 E-value=24 Score=34.41 Aligned_cols=157 Identities=13% Similarity=0.110 Sum_probs=90.6
Q ss_pred CCEEEEec---CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcc---cCccEE
Q 017176 65 HPIVLQIG---GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN---TNVPVS 138 (376)
Q Consensus 65 ~p~~vQL~---g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~---~~~pv~ 138 (376)
.|+++-+= | ++....+.++.+.++|+.+|.|-=..+.+| |.|..|+.-+-..+...+-|++++.+ .+.++.
T Consensus 153 ~PviaD~dtGfG-~~~~v~~~vk~~~~aGaaGi~iEDq~~~~K--kCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~ 229 (439)
T 3i4e_A 153 APIVADAEAGFG-GVLNAFELMKAMIEAGASGVHFEDQLASVK--KCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTV 229 (439)
T ss_dssp CCEEEECTTTTS-SHHHHHHHHHHHHHHTCSEEEEESBCGGGC--BCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCE
T ss_pred CCeEEECCCCCC-ccHHHHHHHHHHHHcCCEEEEEeCCCCCcc--ccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeE
Confidence 78888873 4 345678889999999999999975543333 23444555455666655556666543 255555
Q ss_pred EEecCCCCC----------------------------CccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCC
Q 017176 139 VKCRIGVDD----------------------------HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTI 190 (376)
Q Consensus 139 vKiR~g~~~----------------------------~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~ 190 (376)
|=-|..... ...+++.++... .+.+ |+|.|-++++...
T Consensus 230 IiARTDa~~a~l~~s~~d~~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~-AY~~-GAD~if~E~~~~~------------ 295 (439)
T 3i4e_A 230 LVARTDAEAADLITSDIDDNDKPYLTGERTVEGFFRTKPGLEQAISRGL-AYAP-YADLIWCETGKPD------------ 295 (439)
T ss_dssp EEEEECTTTCCEESCCCCTTTGGGEEEEECTTSCEEECCSHHHHHHHHH-HHTT-TCSEEEECCSSCC------------
T ss_pred EEEEcCcccccccccccccccchhhcccCcccccccccCCHHHHHHHHH-HHHh-hCCEEEecCCCCC------------
Confidence 555543210 023667666543 4455 9999999875321
Q ss_pred CcccHHHHHHHHh----hCCCCeEEEecC-CCC------HHHHH----HHHHcCcCeeEEchHHhhC
Q 017176 191 PPLKYEYYYALLR----DFPDLTFTLNGG-INT------VDEVN----AALRKGAHHVMVGRAAYQN 242 (376)
Q Consensus 191 ~~~~~~~v~~~~~----~~~~ipVi~nGg-I~s------~~da~----~~l~~Gad~VmiGRa~l~~ 242 (376)
.+.+.++.+ .+|...+..|.. .++ .++++ ++-+.|...|.++-+.+.-
T Consensus 296 ----~eei~~f~~~v~~~~P~~~l~~~~sPsfnw~~~~~~~~~~~f~~eL~~lGv~~v~~~la~~ra 358 (439)
T 3i4e_A 296 ----LEYAKKFAEAIHKQFPGKLLSYNCSPSFNWKKNLDDATIAKFQKELGAMGYKFQFITLAGFHA 358 (439)
T ss_dssp ----HHHHHHHHHHHHHHSTTCEEEEECCSSSCHHHHSCHHHHHTHHHHHHHHTCCEEEETTHHHHH
T ss_pred ----HHHHHHHHHHhcccCCceEEeeCCCCCCcCcccCCHHHHHHHHHHHHHcCCeEEEeChHHHHH
Confidence 333333332 244333444432 344 33332 3334799999998766543
No 440
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=86.85 E-value=5.4 Score=37.32 Aligned_cols=128 Identities=12% Similarity=0.156 Sum_probs=72.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 152 (376)
|.+.+.+-++.+.+.|.|+|=++.. +|+ +..| ..+.-.++++.+.+.+ .+||.+-+. . .+..
T Consensus 30 D~~~l~~lv~~li~~Gv~gl~v~Gt--------TGE-~~~L--s~~Er~~v~~~~~~~~~grvpviaGvg----~-~~t~ 93 (318)
T 3qfe_A 30 DLASQERYYAYLARSGLTGLVILGT--------NAE-AFLL--TREERAQLIATARKAVGPDFPIMAGVG----A-HSTR 93 (318)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEESSG--------GGT-GGGS--CHHHHHHHHHHHHHHHCTTSCEEEECC----C-SSHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcc--------ccC-hhhC--CHHHHHHHHHHHHHHhCCCCcEEEeCC----C-CCHH
Confidence 6788889999999999999987641 344 3333 3444455666655544 478887432 2 2355
Q ss_pred HHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE-e-----cCC-CCHHHHHHH
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL-N-----GGI-NTVDEVNAA 225 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~-n-----GgI-~s~~da~~~ 225 (376)
+.++. ++.+++.|+|++.+-.-. |-.. +.. ...-++++.++.+.. ++||+. | .|+ .+++.+.++
T Consensus 94 ~ai~l-a~~a~~~Gadavlv~~P~--y~~k-p~~----~~~l~~~f~~ia~a~-~lPiilYn~P~~t~g~~l~~~~~~~L 164 (318)
T 3qfe_A 94 QVLEH-INDASVAGANYVLVLPPA--YFGK-ATT----PPVIKSFFDDVSCQS-PLPVVIYNFPGVCNGIDLDSDMITTI 164 (318)
T ss_dssp HHHHH-HHHHHHHTCSEEEECCCC--C----CCC----HHHHHHHHHHHHHHC-SSCEEEEECCC----CCCCHHHHHHH
T ss_pred HHHHH-HHHHHHcCCCEEEEeCCc--ccCC-CCC----HHHHHHHHHHHHhhC-CCCEEEEeCCcccCCCCCCHHHHHHH
Confidence 56654 445667999999885421 1000 000 011144556666654 677753 2 133 566766666
Q ss_pred HH
Q 017176 226 LR 227 (376)
Q Consensus 226 l~ 227 (376)
.+
T Consensus 165 a~ 166 (318)
T 3qfe_A 165 AR 166 (318)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 441
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=86.83 E-value=14 Score=33.82 Aligned_cols=124 Identities=17% Similarity=0.125 Sum_probs=75.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQL 154 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~ 154 (376)
|.+.+.+-++.+.+.|.|+|=++.. +|+ +.+ -..+.-.++++.+.+.++- |.+-+ | . .+..+.
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~v~Gt--------TGE-~~~--Ls~eEr~~v~~~~~~~~~g-ViaGv--g--~-~~t~~a 80 (288)
T 2nuw_A 18 NVDALKTHAKNLLEKGIDAIFVNGT--------TGL-GPA--LSKDEKRQNLNALYDVTHK-LIFQV--G--S-LNLNDV 80 (288)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETST--------TTT-GGG--SCHHHHHHHHHHHTTTCSC-EEEEC--C--C-SCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc--------ccC-hhh--CCHHHHHHHHHHHHHHhCC-eEEee--C--C-CCHHHH
Confidence 6788889999888999999988642 344 333 3456667888888877654 55432 2 2 234555
Q ss_pred HHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE-e-----cCCCCHHHHHHH
Q 017176 155 CDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL-N-----GGINTVDEVNAA 225 (376)
Q Consensus 155 ~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~-n-----GgI~s~~da~~~ 225 (376)
++. ++.+++.|+|++-+-.-. +.. .+. ...-++++.++.+.. ++||+. | |--.+++.+.++
T Consensus 81 i~l-a~~A~~~Gadavlv~~P~--y~~-~~s-----~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~L 147 (288)
T 2nuw_A 81 MEL-VKFSNEMDILGVSSHSPY--YFP-RLP-----EKFLAKYYEEIARIS-SHSLYIYNYPAATGYDIPPSILKSL 147 (288)
T ss_dssp HHH-HHHHHTSCCSEEEECCCC--SSC-SCC-----HHHHHHHHHHHHHHC-CSCEEEEECHHHHSCCCCHHHHTTT
T ss_pred HHH-HHHHHhcCCCEEEEcCCc--CCC-CCC-----HHHHHHHHHHHHHhc-CCCEEEEECchHhCcCCCHHHHhcc
Confidence 554 455678999999886421 111 000 011245666777664 788864 4 333466666544
No 442
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=86.73 E-value=8.6 Score=33.55 Aligned_cols=123 Identities=14% Similarity=0.189 Sum_probs=73.9
Q ss_pred EEEecCC-CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCC
Q 017176 68 VLQIGGS-NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVD 146 (376)
Q Consensus 68 ~vQL~g~-~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~ 146 (376)
-+.|+|- +++ -++.+.++|+|+|=+.+--+++ | | =.++.+.+|.+.+...+ .+|.|- .+
T Consensus 3 ~vKICGit~~e----da~~a~~~GaD~iGfif~~~Sp---R---~-----V~~~~a~~i~~~~~~~~-~~VgVf----vn 62 (205)
T 1nsj_A 3 RVKICGITNLE----DALFSVESGADAVGFVFYPKSK---R---Y-----ISPEDARRISVELPPFV-FRVGVF----VN 62 (205)
T ss_dssp EEEECCCCSHH----HHHHHHHHTCSEEEEECCTTCT---T---B-----CCHHHHHHHHHHSCSSS-EEEEEE----SS
T ss_pred cEEECCCCcHH----HHHHHHHcCCCEEEEEecCCCC---C---c-----CCHHHHHHHHHhCCCCC-CEEEEE----eC
Confidence 3677775 344 3455667899999888642332 1 1 24688888887765322 233331 11
Q ss_pred CCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHH
Q 017176 147 DHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL 226 (376)
Q Consensus 147 ~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l 226 (376)
.+.+++ ..++++.++|.|.+||... .+++.++++ ++|||-.=.|.+.++...+.
T Consensus 63 --~~~~~i----~~~~~~~~ld~vQLHG~e~-----------------~~~~~~l~~---~~~vika~~v~~~~~l~~~~ 116 (205)
T 1nsj_A 63 --EEPEKI----LDVASYVQLNAVQLHGEEP-----------------IELCRKIAE---RILVIKAVGVSNERDMERAL 116 (205)
T ss_dssp --CCHHHH----HHHHHHHTCSEEEECSCCC-----------------HHHHHHHHT---TSEEEEEEEESSHHHHHHHG
T ss_pred --CCHHHH----HHHHHhhCCCEEEECCCCC-----------------HHHHHHHhc---CCCEEEEEEcCCHHHHHHHH
Confidence 233343 3344568999999997431 234444432 47888766777888876655
Q ss_pred HcCcCeeEEc
Q 017176 227 RKGAHHVMVG 236 (376)
Q Consensus 227 ~~Gad~VmiG 236 (376)
...+|++.+=
T Consensus 117 ~~~~d~~LlD 126 (205)
T 1nsj_A 117 NYREFPILLD 126 (205)
T ss_dssp GGTTSCEEEE
T ss_pred HcCCCEEEEC
Confidence 5448888773
No 443
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=86.72 E-value=21 Score=33.48 Aligned_cols=157 Identities=16% Similarity=0.069 Sum_probs=93.8
Q ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 62 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 62 ~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
....|+++.+.+++.++..+.++.++++|+|++-+- .|.-. + -..+-+.+-.++|.+++++||.+--
T Consensus 101 ~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~--~P~Y~--~---------~s~~~l~~~f~~VA~a~~lPiilYn 167 (332)
T 2r8w_A 101 RGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLA--PVSYT--P---------LTQEEAYHHFAAVAGATALPLAIYN 167 (332)
T ss_dssp TTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEEC--CCCSS--C---------CCHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred CCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC--CCCCC--C---------CCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 456799999999999999999999999999999774 45421 1 1346677788888888889998753
Q ss_pred ---cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCC-CCeEEEecCCC
Q 017176 142 ---RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGIN 217 (376)
Q Consensus 142 ---R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi~nGgI~ 217 (376)
|.|.+- +.+ + +.++++.-.+-.|--..+.. ...+..+.++++..+ ++ .+.+|+
T Consensus 168 ~P~~tg~~l--~~e-~---~~~La~~pnIvgiKdssgd~--------------~~~~~~~~~l~~~~~~~f-~v~~G~-- 224 (332)
T 2r8w_A 168 NPTTTRFTF--SDE-L---LVRLAYIPNIRAIKMPLPAD--------------ADYAGELARLRPKLSDDF-AIGYSG-- 224 (332)
T ss_dssp CHHHHCCCC--CHH-H---HHHHHTSTTEEEEEECCCTT--------------CCHHHHHHHHTTTSCTTC-EEEECC--
T ss_pred CccccCcCC--CHH-H---HHHHHcCCCEEEEEeCCCCc--------------hhHHHHHHHHHHhcCCCE-EEEeCc--
Confidence 233332 222 2 22333322343333222110 000344455554433 23 355663
Q ss_pred CHHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhC
Q 017176 218 TVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYG 256 (376)
Q Consensus 218 s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g 256 (376)
-+.+...+..|++|++.|.+-+ -|..+.+.++....|
T Consensus 225 -D~~~l~~l~~G~~G~is~~anv-~P~~~~~l~~a~~~G 261 (332)
T 2r8w_A 225 -DWGCTDATLAGGDTWYSVVAGL-LPVPALQLMRAAQAG 261 (332)
T ss_dssp -HHHHHHHHHTTCSEEEESGGGT-CHHHHHHHHHHHHTT
T ss_pred -hHHHHHHHHCCCCEEEeCHHHh-CHHHHHHHHHHHHCC
Confidence 2345566678999999987764 466654444443445
No 444
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=86.68 E-value=2.7 Score=38.18 Aligned_cols=72 Identities=15% Similarity=0.141 Sum_probs=53.6
Q ss_pred HHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEchH
Q 017176 159 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 238 (376)
Q Consensus 159 ~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa 238 (376)
++.. ++|+++|.|-.-....+|. ++.+.++++. +++||+---=|.|+-++.++...|||+|.+==+
T Consensus 70 A~~~-~~GA~aiSVLTd~~~F~Gs------------~~~L~~vr~~-v~lPvLrKDFiid~yQI~eAr~~GADaILLI~a 135 (258)
T 4a29_A 70 AKFM-ERYAVGLSITTEEKYFNGS------------YETLRKIASS-VSIPILMSDFIVKESQIDDAYNLGADTVLLIVK 135 (258)
T ss_dssp HHHH-TTTCSEEEEECCSTTTCCC------------HHHHHHHHTT-CSSCEEEESCCCSHHHHHHHHHHTCSEEEEEGG
T ss_pred HHHH-hCCCeEEEEeCCCCCCCCC------------HHHHHHHHHh-cCCCEeeccccccHHHHHHHHHcCCCeeehHHh
Confidence 3444 4899999886544333442 6777777665 599999998899999999999999999987555
Q ss_pred HhhCCc
Q 017176 239 AYQNPW 244 (376)
Q Consensus 239 ~l~~P~ 244 (376)
+|.+..
T Consensus 136 ~L~~~~ 141 (258)
T 4a29_A 136 ILTERE 141 (258)
T ss_dssp GSCHHH
T ss_pred hcCHHH
Confidence 555443
No 445
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=86.64 E-value=3.4 Score=38.03 Aligned_cols=61 Identities=18% Similarity=0.170 Sum_probs=38.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEE
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVK 140 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vK 140 (376)
.+++...+.|+...+.|+|.||||+-+. |.|.-.-+.....+.+..+++++++. ++|++|-
T Consensus 26 ~~~~~a~~~a~~~v~~GAdiIDIGgest-----rpga~~v~~~eE~~Rv~pvi~~l~~~-~~piSID 86 (280)
T 1eye_A 26 LDLDDAVKHGLAMAAAGAGIVDVGGESS-----RPGATRVDPAVETSRVIPVVKELAAQ-GITVSID 86 (280)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECC-------------------HHHHHHHHHHHHHT-TCCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccC-----CCCCCCCCHHHHHHHHHHHHHHhhcC-CCEEEEe
Confidence 3678888888888889999999996331 11111122345677788888888765 8899884
No 446
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=86.62 E-value=11 Score=34.62 Aligned_cols=112 Identities=14% Similarity=0.232 Sum_probs=72.5
Q ss_pred ccCCHHHHHHHHHHHhcccCccEEEEec-CCC-CC----------CccHHHHHHHHHHHhhcCCccEEEEccCccc--cC
Q 017176 115 LMLDPKFVGEAMSVIAANTNVPVSVKCR-IGV-DD----------HDSYNQLCDFIYKVSSLSPTRHFIIHSRKAL--LN 180 (376)
Q Consensus 115 l~~~~~~~~eiv~~v~~~~~~pv~vKiR-~g~-~~----------~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~--~~ 180 (376)
++.+.+...++++...+ .++.|-.-+- +|- ++ ..+.++..+|+ ++.|+|.|.+.=++.. |+
T Consensus 110 ~eeNi~~Tk~vv~~ah~-~gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv----~~TgvD~LAvaiGt~HG~Y~ 184 (286)
T 1gvf_A 110 FAENVKLVKSVVDFCHS-QDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFV----ELTGVDSLAVAIGTAHGLYS 184 (286)
T ss_dssp HHHHHHHHHHHHHHHHH-TTCEEEEEESCCC-----------CCSSCCHHHHHHHH----HHHCCSEEEECSSCCSSCCS
T ss_pred HHHHHHHHHHHHHHHHH-cCCEEEEEEeeccCcccCcccccccccCCCHHHHHHHH----HHHCCCEEEeecCccccCcC
Confidence 34566777777777654 2444433322 111 11 13356665554 4689999998776642 22
Q ss_pred CCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCH-HHHHHHHHcCcCeeEEchHHh
Q 017176 181 GISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV-DEVNAALRKGAHHVMVGRAAY 240 (376)
Q Consensus 181 g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~-~da~~~l~~Gad~VmiGRa~l 240 (376)
| .+.++++.+.++.+.. ++|++.-||=-.+ +++.++++.|+-=|=|++.+.
T Consensus 185 ~--------~p~Ld~~~L~~I~~~~-~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Tdl~ 236 (286)
T 1gvf_A 185 K--------TPKIDFQRLAEIREVV-DVPLVLHGASDVPDEFVRRTIELGVTKVNVATELK 236 (286)
T ss_dssp S--------CCCCCHHHHHHHHHHC-CSCEEECCCTTCCHHHHHHHHHTTEEEEEECHHHH
T ss_pred C--------CCccCHHHHHHHHHhc-CCCEEEECCCCCCHHHHHHHHHCCCeEEEEChHHH
Confidence 2 2457799999988775 8999988875544 568889999988888888764
No 447
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=86.59 E-value=4 Score=40.93 Aligned_cols=42 Identities=19% Similarity=0.342 Sum_probs=34.9
Q ss_pred cccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEE
Q 017176 192 PLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 235 (376)
Q Consensus 192 ~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~Vmi 235 (376)
...|+.+..+++.. ++||+.- ++.+.+++..+.+.|+|+|.+
T Consensus 329 ~~~~~~i~~lr~~~-~~PvivK-gv~~~e~A~~a~~aGad~I~v 370 (511)
T 1kbi_A 329 SLTWKDIEELKKKT-KLPIVIK-GVQRTEDVIKAAEIGVSGVVL 370 (511)
T ss_dssp TCCHHHHHHHHHHC-SSCEEEE-EECSHHHHHHHHHTTCSEEEE
T ss_pred HhHHHHHHHHHHHh-CCcEEEE-eCCCHHHHHHHHHcCCCEEEE
Confidence 34588888888765 8999876 466799999999999999999
No 448
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=86.52 E-value=14 Score=35.08 Aligned_cols=129 Identities=11% Similarity=0.059 Sum_probs=81.0
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc---CccEEEEec
Q 017176 66 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT---NVPVSVKCR 142 (376)
Q Consensus 66 p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~---~~pv~vKiR 142 (376)
|+-..+...+++++.+.++...+.||..+-+..|.. +.+.-.+.++++++++ ++.+.|-..
T Consensus 141 ~~y~s~~~~~~~~~~~~a~~~~~~G~~~~KiKvg~~----------------~~~~di~~v~~vr~a~~g~~~~l~vDaN 204 (376)
T 4h2h_A 141 SSYYSLGVMEPDEAARQALEKQREGYSRLQVKLGAR----------------PIEIDIEAIRKVWEAVRGTGIALAADGN 204 (376)
T ss_dssp ECEEEECSCCHHHHHHHHHHHHHHTCSEEEEECCSS----------------CHHHHHHHHHHHHHHHTTSCCEEEEECT
T ss_pred eEeeecccCCHHHHHHHHHHHHhcCceEEEEecCCC----------------CHHHHHHHHHHHHhhccCCeeEEEEeec
Confidence 445556667899888888888788999998865421 2233345566666544 345555555
Q ss_pred CCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHH
Q 017176 143 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 222 (376)
Q Consensus 143 ~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da 222 (376)
-+|+ .++.++++ +.+++.++ ++. + .++ .++.+.++++. .++||.+.=.+.+..++
T Consensus 205 ~~~~----~~~A~~~~-~~l~~~~~-~iE-----e-----------P~~--~~~~~~~l~~~-~~~pia~dE~~~~~~~~ 259 (376)
T 4h2h_A 205 RGWT----TRDALRFS-RECPDIPF-VME-----Q-----------PCN--SFEDLEAIRPL-CHHALYMDEDGTSLNTV 259 (376)
T ss_dssp TCCC----HHHHHHHH-HHCTTSCE-EEE-----S-----------CSS--SHHHHHHHGGG-CCSCEEESTTCCSHHHH
T ss_pred cCCC----HHHHHHHH-HHHhhccc-ccc-----C-----------Ccc--hhhhHhhhhhc-ccCccccCcccCCHHHH
Confidence 5553 34545543 34455553 321 0 011 25556666555 48999988889999999
Q ss_pred HHHHHc-CcCeeEE
Q 017176 223 NAALRK-GAHHVMV 235 (376)
Q Consensus 223 ~~~l~~-Gad~Vmi 235 (376)
.++++. .+|.|++
T Consensus 260 ~~~~~~~~~d~v~~ 273 (376)
T 4h2h_A 260 ITAAATSLVDGFGM 273 (376)
T ss_dssp HHHHHTTCCSEECC
T ss_pred HHHHHhhccCcccc
Confidence 999984 4787764
No 449
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=86.51 E-value=3.3 Score=37.17 Aligned_cols=86 Identities=8% Similarity=0.069 Sum_probs=55.7
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHCCCCEE--EecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecC
Q 017176 66 PIVLQIGGSNLDNLAKATELANAYNYDEI--NLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI 143 (376)
Q Consensus 66 p~~vQL~g~~~~~~~~aa~~~~~~G~d~I--eiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~ 143 (376)
.+...|...|...+.+..+.+.+.|+|.+ |+-=|.-+++. .||- ++++++|+.+.. .+++=.
T Consensus 15 ~i~psila~D~~~l~~~i~~~~~~gad~lhvDvmDG~fvpn~----t~G~----------~~v~~lr~~~~~--DvhLMv 78 (237)
T 3cu2_A 15 KLSVGILSANWLQLNEEVTTLLENQINVLHFDIADGQFSSLF----TVGA----------IGIKYFPTHCFK--DVHLMV 78 (237)
T ss_dssp CEEEEGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCB----CBCT----------HHHHTSCTTSEE--EEEEEC
T ss_pred eEEEeeeeCCcccHHHHHHHHHHcCCCEEEEEEecCccccch----hhhH----------HHHHHHhhhCCC--CeEEEE
Confidence 37888988898889999999999999974 55334422221 1451 567778876643 555433
Q ss_pred CCCCCccHHHHHHHHHHHhhcCCccEEEEccCc
Q 017176 144 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK 176 (376)
Q Consensus 144 g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~ 176 (376)
++. +..++ .+.++|+|.|+||...
T Consensus 79 --~~p---~~~i~----~~~~aGAd~itvH~ea 102 (237)
T 3cu2_A 79 --RNQ---LEVAK----AVVANGANLVTLQLEQ 102 (237)
T ss_dssp --SCH---HHHHH----HHHHTTCSEEEEETTC
T ss_pred --ECH---HHHHH----HHHHcCCCEEEEecCC
Confidence 332 22222 2346999999999754
No 450
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=86.43 E-value=20 Score=33.05 Aligned_cols=153 Identities=17% Similarity=0.180 Sum_probs=92.6
Q ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccC-ccEEEE
Q 017176 62 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVK 140 (376)
Q Consensus 62 ~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~-~pv~vK 140 (376)
....|+++.+.+++.++-.+.++.++++|+|++-+- .|... + ...+-+.+-.++|.++++ +||.+-
T Consensus 78 ~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~--~P~y~--~---------~s~~~l~~~f~~va~a~~~lPiilY 144 (303)
T 2wkj_A 78 KGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAV--TPFYY--P---------FSFEEHCDHYRAIIDSADGLPMVVY 144 (303)
T ss_dssp TTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEE--CCCSS--C---------CCHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEec--CCCCC--C---------CCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 456799999999999999999999999999999885 45421 1 134667777788877777 999875
Q ss_pred e---cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCC
Q 017176 141 C---RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGIN 217 (376)
Q Consensus 141 i---R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~ 217 (376)
- |.|.+- +.+ + +.++++.-.+-.|--..+. ...+.++++..++.. +.+|+=
T Consensus 145 n~P~~tg~~l--~~~-~---~~~La~~pnIvgiK~s~gd------------------~~~~~~~~~~~~~f~-v~~G~d- 198 (303)
T 2wkj_A 145 NIPALSGVKL--TLD-Q---INTLVTLPGVGALXQTSGD------------------LYQMEQIRREHPDLV-LYNGYD- 198 (303)
T ss_dssp ECHHHHCCCC--CHH-H---HHHHHTSTTEEEEEECCCC------------------HHHHHHHHHHCTTCE-EEECCG-
T ss_pred eCccccCCCC--CHH-H---HHHHhcCCCEEEEeCCCCC------------------HHHHHHHHHhCCCeE-EEeCcH-
Confidence 4 334332 222 2 2233332234333322211 344445554433444 445541
Q ss_pred CHHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhC
Q 017176 218 TVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYG 256 (376)
Q Consensus 218 s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g 256 (376)
+.+...+..|++|++.+.+-+ -|..+.+.++....|
T Consensus 199 --~~~~~~l~~G~~G~is~~an~-~P~~~~~l~~a~~~G 234 (303)
T 2wkj_A 199 --NIFASGLLAGADGGIGSTYNI-MGWRYQGIVKALKEG 234 (303)
T ss_dssp --GGHHHHHHHTCCEEEETTHHH-HHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHCCCCEEEeCHHHh-CHHHHHHHHHHHHCC
Confidence 225556667999999988765 465554444443445
No 451
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=86.42 E-value=1.4 Score=41.02 Aligned_cols=86 Identities=10% Similarity=0.123 Sum_probs=0.0
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCC--CeEEEecCCCCHHHHHHHHH
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPD--LTFTLNGGINTVDEVNAALR 227 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~--ipVi~nGgI~s~~da~~~l~ 227 (376)
+++.+.+.+..+++ .|++.|.+-|.|......+..+. .+.+...++...+ +|||+.-|=.+.+++.+..+
T Consensus 26 D~~~l~~lv~~li~-~Gv~gl~v~GttGE~~~Ls~~Er-------~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~ 97 (301)
T 3m5v_A 26 DEQSYARLIKRQIE-NGIDAVVPVGTTGESATLTHEEH-------RTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAK 97 (301)
T ss_dssp CHHHHHHHHHHHHH-TTCCEEECSSTTTTGGGSCHHHH-------HHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-cCCCEEEECccccChhhCCHHHH-------HHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHH
Q ss_pred ----cCcCeeEEchHHhhCC
Q 017176 228 ----KGAHHVMVGRAAYQNP 243 (376)
Q Consensus 228 ----~Gad~VmiGRa~l~~P 243 (376)
.|||+||+-...+..|
T Consensus 98 ~a~~~Gadavlv~~P~y~~~ 117 (301)
T 3m5v_A 98 FAKEHGADGILSVAPYYNKP 117 (301)
T ss_dssp HHHHTTCSEEEEECCCSSCC
T ss_pred HHHHcCCCEEEEcCCCCCCC
No 452
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=86.39 E-value=20 Score=32.89 Aligned_cols=153 Identities=14% Similarity=0.080 Sum_probs=92.1
Q ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 62 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 62 ~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
....|+++.+.+++.++-.+.++.++++|+|++-+- .|.-. + ...+-+.+-.++|.+++++|+.+--
T Consensus 68 ~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~--~P~y~--~---------~s~~~l~~~f~~ia~a~~lPiilYn 134 (292)
T 2ojp_A 68 DGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTV--TPYYN--R---------PSQEGLYQHFKAIAEHTDLPQILYN 134 (292)
T ss_dssp TTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEE--CCCSS--C---------CCHHHHHHHHHHHHTTCSSCEEEEC
T ss_pred CCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEEC--CCCCC--C---------CCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 456799999999999999999999999999999775 45421 1 1346788888888888899998753
Q ss_pred ---cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCC-CCeEEEecCCC
Q 017176 142 ---RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGIN 217 (376)
Q Consensus 142 ---R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi~nGgI~ 217 (376)
|.|.+- +.+ + +.++++.-.+-.|--.. + +...+.++++..+ +..| .+|+=
T Consensus 135 ~P~~tg~~l--~~~-~---~~~La~~pnivgiK~s~---------g---------d~~~~~~~~~~~~~~f~v-~~G~d- 188 (292)
T 2ojp_A 135 VPSRTGCDL--LPE-T---VGRLAKVKNIIGIXEAT---------G---------NLTRVNQIKELVSDDFVL-LSGDD- 188 (292)
T ss_dssp CHHHHSCCC--CHH-H---HHHHHTSTTEEEC-CCS---------C---------CTHHHHHHHTTSCTTSBC-EESCG-
T ss_pred CcchhccCC--CHH-H---HHHHHcCCCEEEEeCCC---------C---------CHHHHHHHHHhcCCCEEE-EECcH-
Confidence 233332 222 2 22333212222221111 1 1344555555433 3433 45531
Q ss_pred CHHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhC
Q 017176 218 TVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYG 256 (376)
Q Consensus 218 s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g 256 (376)
+.+...+..|++|++.|.+-+ -|..+.+.++....|
T Consensus 189 --~~~~~~l~~G~~G~is~~~n~-~P~~~~~l~~a~~~G 224 (292)
T 2ojp_A 189 --ASALDFMQYGGHGVISVTANV-AARDMAQMCKLAAEG 224 (292)
T ss_dssp --GGHHHHHHTTCCEEEESGGGT-CHHHHHHHHHHHHTT
T ss_pred --HHHHHHHHCCCcEEEeCHHHh-hHHHHHHHHHHHHCC
Confidence 224456678999999988765 477655444443444
No 453
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=86.31 E-value=7.5 Score=34.48 Aligned_cols=128 Identities=13% Similarity=0.073 Sum_probs=72.1
Q ss_pred HHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecC-CCCC---CccHHHHHHHH
Q 017176 83 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI-GVDD---HDSYNQLCDFI 158 (376)
Q Consensus 83 a~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~-g~~~---~~~~~~~~~~i 158 (376)
|..+++.|+|-|||+.+=.. | .+--....+..+..+ .+.+++||-|=+|+ +-+- ..+++.+.+.+
T Consensus 14 a~~A~~~GAdRIELc~~L~~---------G-GlTPS~g~i~~~~~~-~~~~~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di 82 (224)
T 2bdq_A 14 LTRLDKAIISRVELCDNLAV---------G-GTTPSYGVIKEANQY-LHEKGISVAVMIRPRGGNFVYNDLELRIMEEDI 82 (224)
T ss_dssp GGGCCTTTCCEEEEEBCGGG---------T-CBCCCHHHHHHHHHH-HHHTTCEEEEECCSSSSCSCCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCCccc---------C-CcCCCHHHHHHHHHh-hhhcCCceEEEECCCCCCCcCCHHHHHHHHHHH
Confidence 44567889999999753111 1 122223333333211 15568999998888 2111 13455555544
Q ss_pred HHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecC---C--CCHHHHHHHHH-cCcCe
Q 017176 159 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG---I--NTVDEVNAALR-KGAHH 232 (376)
Q Consensus 159 ~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGg---I--~s~~da~~~l~-~Gad~ 232 (376)
. .+.+.|+|.+.+-.=+. .| .++.+.+.++++...++||..-=- + .++..+.+.+. .|++-
T Consensus 83 ~-~~~~~GadGvV~G~Lt~--dg----------~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~r 149 (224)
T 2bdq_A 83 L-RAVELESDALVLGILTS--NN----------HIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTR 149 (224)
T ss_dssp H-HHHHTTCSEEEECCBCT--TS----------SBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCE
T ss_pred H-HHHHcCCCEEEEeeECC--CC----------CcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHcCCCE
Confidence 3 44579999988643221 11 234666666665544677765433 3 56666655554 78887
Q ss_pred eE
Q 017176 233 VM 234 (376)
Q Consensus 233 Vm 234 (376)
|.
T Consensus 150 IL 151 (224)
T 2bdq_A 150 IL 151 (224)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 454
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=86.29 E-value=4.3 Score=37.70 Aligned_cols=107 Identities=14% Similarity=0.073 Sum_probs=61.0
Q ss_pred ccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEE-ccCccccCCCCCCCCCC
Q 017176 111 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII-HSRKALLNGISPAENRT 189 (376)
Q Consensus 111 yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~v-h~r~~~~~g~~~~~~~~ 189 (376)
.|+..+++.+++.++ . .++.||.+|.-...+ .+++...+ .. +.+.|.+.|++ |.++. + +.. +
T Consensus 137 IgA~~~~n~~LLr~v----a-~~gkPVilK~Gms~t-~~ei~~av---e~-i~~~Gn~~iiL~erg~~-y-~~~---~-- 199 (298)
T 3fs2_A 137 IPAFLCRQTDLLIAA----A-RTGRVVNVKKGQFLA-PWDMKNVL---AK-ITESGNPNVLATERGVS-F-GYN---T-- 199 (298)
T ss_dssp ECGGGTTCHHHHHHH----H-HTTSEEEEECCTTCC-GGGHHHHH---HH-HHTTTCCCEEEEECCEE-C-SSS---C--
T ss_pred ECccccCCHHHHHHH----H-ccCCcEEEeCCCCCC-HHHHHHHH---HH-HHHcCCCeEEEEECCCC-C-CCC---C--
Confidence 377777888865553 2 358899999765322 23333333 22 34578766655 66552 2 111 0
Q ss_pred CCcccHHHHHHHHhhCCCCeEEEe---------------cCCCC--HHHHHHHHHcCcCeeEEch
Q 017176 190 IPPLKYEYYYALLRDFPDLTFTLN---------------GGINT--VDEVNAALRKGAHHVMVGR 237 (376)
Q Consensus 190 ~~~~~~~~v~~~~~~~~~ipVi~n---------------GgI~s--~~da~~~l~~Gad~VmiGR 237 (376)
..+++..+..+++ + ++||+.. ||.++ +.-+..++..||||++|=+
T Consensus 200 -~~vdl~~i~~lk~-~-~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~ 261 (298)
T 3fs2_A 200 -LVSDMRALPIMAG-L-GAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFIET 261 (298)
T ss_dssp -EECCTTHHHHHHT-T-TSCEEEEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEEEE
T ss_pred -CccCHHHHHHHHH-c-CCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEEe
Confidence 1134556666665 6 9999984 23221 2345566778999999843
No 455
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=86.27 E-value=6.5 Score=37.30 Aligned_cols=141 Identities=6% Similarity=-0.060 Sum_probs=72.3
Q ss_pred HHHHHHHHCCCCEEEecCC-------CCCccccCCCCccccccCC-------HHHHHHHHHH-HhcccCccEEEEecCCC
Q 017176 81 KATELANAYNYDEINLNCG-------CPSPKVAGHGCFGVSLMLD-------PKFVGEAMSV-IAANTNVPVSVKCRIGV 145 (376)
Q Consensus 81 ~aa~~~~~~G~d~IeiN~g-------cP~~~v~r~g~yG~~l~~~-------~~~~~eiv~~-v~~~~~~pv~vKiR~g~ 145 (376)
+..+.+.+.||-+|++-.- .|.+.+.+.. .+++|+ .+...+-++. .++..+.|+.+-+--
T Consensus 63 e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~---~~~iN~~G~~n~G~~~~~~~l~~~~~~~~~~pvivsI~g-- 137 (345)
T 3oix_A 63 EELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTK---LGSINSMGLPNLGINYYLDYVTELQKQPDSKNHFLSLVG-- 137 (345)
T ss_dssp HHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECS---SEEEECCCCCBSCHHHHHHHHHHHHHSTTCCCCEEEECC--
T ss_pred HHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecc---cchhccCCCCChhHHHHHHHHHHHhhccCCCCEEEEecC--
Confidence 4556677889999988543 3434333322 122332 2333333333 334567888886642
Q ss_pred CCCccHHHHHHHHHHHhhcCCcc-EEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE--ecCCCCHHHH
Q 017176 146 DDHDSYNQLCDFIYKVSSLSPTR-HFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL--NGGINTVDEV 222 (376)
Q Consensus 146 ~~~~~~~~~~~~i~~~~e~~Gvd-~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~--nGgI~s~~da 222 (376)
. +.++.++. ++.++++|++ +|.|.-..+...|.. ..-.-+....+.+..+++ ..++||+. .-+ .+..++
T Consensus 138 ~---~~~d~~~~-a~~l~~~g~~d~ielNisCPn~~G~~--~l~~~~e~l~~il~av~~-~~~~PV~vKi~p~-~~~~~~ 209 (345)
T 3oix_A 138 M---SPEETHTI-LXMVEASKYQGLVELNLSCPNVPGXP--QIAYDFETTDQILSEVFT-YFTKPLGIKLPPY-FDIVHF 209 (345)
T ss_dssp S---SHHHHHHH-HHHHHHSSCCSEEEEECSCCCSTTCC--CGGGCHHHHHHHHHHHTT-TCCSCEEEEECCC-CCHHHH
T ss_pred C---CHHHHHHH-HHHHhccCCCcEEEEecCCCCcCCch--hhcCCHHHHHHHHHHHHH-HhCCCeEEEECCC-CCHHHH
Confidence 2 34444443 3445667877 999875433222211 100000111233344433 34788864 333 477787
Q ss_pred HHHHH-cCcCeeE
Q 017176 223 NAALR-KGAHHVM 234 (376)
Q Consensus 223 ~~~l~-~Gad~Vm 234 (376)
.++++ .|+|+|.
T Consensus 210 a~~~~~aga~~i~ 222 (345)
T 3oix_A 210 DQAAAIFNXYPLT 222 (345)
T ss_dssp HHHHHHHTTSCCS
T ss_pred HHHHHHhCCCceE
Confidence 77776 7887663
No 456
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=86.20 E-value=1.5 Score=40.63 Aligned_cols=86 Identities=13% Similarity=-0.018 Sum_probs=50.6
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH--
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-- 227 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~-- 227 (376)
+++.+.+.+..++ +.|++.|.+.|.|......+.. -+.+.+...++...+ -|.+.|+..+.+.++.+..
T Consensus 18 D~~~l~~lv~~li-~~Gv~gl~v~GtTGE~~~Ls~e-------Er~~v~~~~~~~~~g-ViaGvg~~~t~~ai~la~~A~ 88 (288)
T 2nuw_A 18 NVDALKTHAKNLL-EKGIDAIFVNGTTGLGPALSKD-------EKRQNLNALYDVTHK-LIFQVGSLNLNDVMELVKFSN 88 (288)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEEETSTTTTGGGSCHH-------HHHHHHHHHTTTCSC-EEEECCCSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHhCC-eEEeeCCCCHHHHHHHHHHHH
Confidence 3444444444443 5899999999877543222211 112334444444334 4557777766665554432
Q ss_pred -cCcCeeEEchHHhhC-Cc
Q 017176 228 -KGAHHVMVGRAAYQN-PW 244 (376)
Q Consensus 228 -~Gad~VmiGRa~l~~-P~ 244 (376)
.|||+||+-...+.. |.
T Consensus 89 ~~Gadavlv~~P~y~~~~s 107 (288)
T 2nuw_A 89 EMDILGVSSHSPYYFPRLP 107 (288)
T ss_dssp TSCCSEEEECCCCSSCSCC
T ss_pred hcCCCEEEEcCCcCCCCCC
Confidence 799999999888766 53
No 457
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=86.13 E-value=13 Score=34.57 Aligned_cols=127 Identities=9% Similarity=0.081 Sum_probs=76.0
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccHH
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYN 152 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~~ 152 (376)
-|.+.+.+-++.+.+.|.|+|=++.. +|+ +.+| ..+.-.++++.+.+.+ .+||.+-+. . .++.
T Consensus 26 iD~~~l~~lv~~li~~Gv~Gl~v~Gt--------TGE-~~~L--t~~Er~~v~~~~v~~~grvpViaGvg----~-~~t~ 89 (313)
T 3dz1_A 26 IDDVSIDRLTDFYAEVGCEGVTVLGI--------LGE-APKL--DAAEAEAVATRFIKRAKSMQVIVGVS----A-PGFA 89 (313)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESTG--------GGT-GGGS--CHHHHHHHHHHHHHHCTTSEEEEECC----C-SSHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEeCcc--------CcC-hhhC--CHHHHHHHHHHHHHHcCCCcEEEecC----C-CCHH
Confidence 36788999999999999999977641 344 3333 3444455555555544 578877432 2 2355
Q ss_pred HHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCC-CCeEEE-e-----cCCCCHHHHHHH
Q 017176 153 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTL-N-----GGINTVDEVNAA 225 (376)
Q Consensus 153 ~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi~-n-----GgI~s~~da~~~ 225 (376)
+.++. ++.+++.|+|++.+-.-. +. +. ...-++++.++.+..+ ++||+. | |--.+++.+.++
T Consensus 90 ~ai~l-a~~A~~~Gadavlv~~P~--~~---~s-----~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~L 158 (313)
T 3dz1_A 90 AMRRL-ARLSMDAGAAGVMIAPPP--SL---RT-----DEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQI 158 (313)
T ss_dssp HHHHH-HHHHHHHTCSEEEECCCT--TC---CS-----HHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHH
T ss_pred HHHHH-HHHHHHcCCCEEEECCCC--CC---CC-----HHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHH
Confidence 56654 455678999999885321 11 10 0112456666666542 388865 3 545677777776
Q ss_pred HH
Q 017176 226 LR 227 (376)
Q Consensus 226 l~ 227 (376)
.+
T Consensus 159 a~ 160 (313)
T 3dz1_A 159 VM 160 (313)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 458
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=86.09 E-value=18 Score=33.04 Aligned_cols=136 Identities=17% Similarity=0.139 Sum_probs=86.0
Q ss_pred EEEEecCC-CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCC
Q 017176 67 IVLQIGGS-NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGV 145 (376)
Q Consensus 67 ~~vQL~g~-~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~ 145 (376)
+++-.++. +.+...+.|+.++++|+|.+-...--|-... +.|=+ + .+.-.++++++++..++|+..- +
T Consensus 41 vIAgpc~~~~~e~a~~~a~~~k~~ga~~~k~~~~kprts~---~~f~g-~---g~~gl~~l~~~~~~~Gl~~~te----~ 109 (276)
T 1vs1_A 41 VIAGPCSVESWEQVREAALAVKEAGAHMLRGGAFKPRTSP---YSFQG-L---GLEGLKLLRRAGDEAGLPVVTE----V 109 (276)
T ss_dssp EEEECSBCCCHHHHHHHHHHHHHHTCSEEECBSSCCCSST---TSCCC-C---THHHHHHHHHHHHHHTCCEEEE----C
T ss_pred EEEecCCCCCHHHHHHHHHHHHHhCCCEEEeEEEeCCCCh---hhhcC-C---CHHHHHHHHHHHHHcCCcEEEe----c
Confidence 34444432 6788888999999999999877665554321 11211 1 1444566677777789998763 2
Q ss_pred CCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCC-CHHHHHH
Q 017176 146 DDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGIN-TVDEVNA 224 (376)
Q Consensus 146 ~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~-s~~da~~ 224 (376)
-+..+.+ ++ .+. +|++.|-+|+.. ++.++.++.+. +.||+..-|.. |.+++..
T Consensus 110 ~d~~~~~----~l----~~~-vd~~kIgs~~~~---------------n~~ll~~~a~~--~kPV~lk~G~~~t~~ei~~ 163 (276)
T 1vs1_A 110 LDPRHVE----TV----SRY-ADMLQIGARNMQ---------------NFPLLREVGRS--GKPVLLKRGFGNTVEELLA 163 (276)
T ss_dssp CCGGGHH----HH----HHH-CSEEEECGGGTT---------------CHHHHHHHHHH--TCCEEEECCTTCCHHHHHH
T ss_pred CCHHHHH----HH----HHh-CCeEEECccccc---------------CHHHHHHHHcc--CCeEEEcCCCCCCHHHHHH
Confidence 2223332 22 245 899999888642 15566666653 89999999997 9888777
Q ss_pred HHH----cCc-CeeEEchHH
Q 017176 225 ALR----KGA-HHVMVGRAA 239 (376)
Q Consensus 225 ~l~----~Ga-d~VmiGRa~ 239 (376)
+++ .|. +.+.+=||.
T Consensus 164 Ave~i~~~Gn~~i~L~~Rg~ 183 (276)
T 1vs1_A 164 AAEYILLEGNWQVVLVERGI 183 (276)
T ss_dssp HHHHHHHTTCCCEEEEECCB
T ss_pred HHHHHHHcCCCeEEEEeCCc
Confidence 664 576 455555565
No 459
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=86.03 E-value=21 Score=32.84 Aligned_cols=153 Identities=12% Similarity=0.039 Sum_probs=93.2
Q ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 62 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 62 ~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
....|+++.+.+++.++-.+.++.++++|+|++-+- .|... + -..+-+.+-.++|.+++++|+.+--
T Consensus 67 ~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~--~P~y~--~---------~s~~~l~~~f~~va~a~~lPiilYn 133 (297)
T 2rfg_A 67 QGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCV--AGYYN--R---------PSQEGLYQHFKMVHDAIDIPIIVYN 133 (297)
T ss_dssp TTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEEC--CCTTT--C---------CCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEc--CCCCC--C---------CCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 456799999999999999999999999999999884 45421 1 1346677888888888899998754
Q ss_pred ---cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCC-CCeEEEecCCC
Q 017176 142 ---RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGIN 217 (376)
Q Consensus 142 ---R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi~nGgI~ 217 (376)
|.|.+- +.+ + +.++++.-.+-.|--..+. ...+.++++..+ +.. +.+|+=
T Consensus 134 ~P~~tg~~l--~~~-~---~~~La~~pnIvgiKds~gd------------------~~~~~~~~~~~~~~f~-v~~G~d- 187 (297)
T 2rfg_A 134 IPPRAVVDI--KPE-T---MARLAALPRIVGVKDATTD------------------LARISRERMLINKPFS-FLSGDD- 187 (297)
T ss_dssp CHHHHSCCC--CHH-H---HHHHHTSTTEEEEEECSCC------------------TTHHHHHHTTCCSCCE-EEESCG-
T ss_pred CccccCCCC--CHH-H---HHHHHcCCCEEEEEeCCCC------------------HHHHHHHHHhcCCCEE-EEeCcH-
Confidence 233332 222 2 2233332233333322211 223445554433 343 456642
Q ss_pred CHHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhC
Q 017176 218 TVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYG 256 (376)
Q Consensus 218 s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g 256 (376)
+.+...+..|++|++.|.+-+ -|..+.+.++....|
T Consensus 188 --~~~l~~l~~G~~G~is~~an~-~P~~~~~l~~a~~~G 223 (297)
T 2rfg_A 188 --MTAIAYNASGGQGCISVSANI-APALYGQMQTATLQG 223 (297)
T ss_dssp --GGHHHHHHTTCCEEEESGGGT-CHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHCCCCEEEecHHHh-hHHHHHHHHHHHHCC
Confidence 224456678999999988765 377655444444445
No 460
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=86.03 E-value=1.1 Score=43.33 Aligned_cols=44 Identities=14% Similarity=0.309 Sum_probs=37.1
Q ss_pred CcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEEc
Q 017176 191 PPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 236 (376)
Q Consensus 191 ~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~VmiG 236 (376)
+...|+.+.++++.. ++||+.- +|.+++++..+.+.|||+|.++
T Consensus 210 p~~~~~~i~~i~~~~-~~Pv~vk-gv~t~e~a~~a~~aGad~I~vs 253 (380)
T 1p4c_A 210 ASFNWEALRWLRDLW-PHKLLVK-GLLSAEDADRCIAEGADGVILS 253 (380)
T ss_dssp TTCCHHHHHHHHHHC-CSEEEEE-EECCHHHHHHHHHTTCSEEEEC
T ss_pred ccccHHHHHHHHHhc-CCCEEEE-ecCcHHHHHHHHHcCCCEEEEc
Confidence 344588888888876 8999875 4899999999999999999993
No 461
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=86.02 E-value=3.8 Score=37.19 Aligned_cols=107 Identities=19% Similarity=0.195 Sum_probs=54.9
Q ss_pred HHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCc---------
Q 017176 122 VGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPP--------- 192 (376)
Q Consensus 122 ~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~--------- 192 (376)
+.+..+..++.-...+..-+..|..+ .++..+. ++.++++|+|.|.+.. ..... -.+.+.+..
T Consensus 4 ~~~~f~~~~~~~~~~~i~~i~~g~p~---~~~~~~~-~~~l~~~G~D~IElG~--P~sdP--~adgp~i~~a~~~al~~G 75 (262)
T 2ekc_A 4 ISDKFTELKEKREKALVSYLMVGYPD---YETSLKA-FKEVLKNGTDILEIGF--PFSDP--VADGPTIQVAHEVALKNG 75 (262)
T ss_dssp HHHHHHHHHHHTBCEEEEEEETTSSC---HHHHHHH-HHHHHHTTCSEEEEEC--CCSCC--TTSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCceEEEEecCCCCC---hHHHHHH-HHHHHHcCCCEEEECC--CCCCc--ccccHHHHHHHHHHHHcC
Confidence 33444444432222233333466544 3344443 3456689999999842 11000 001001100
Q ss_pred ----ccHHHHHHHHhhCCCCeEEEecCCCC------HHHHHHHHHcCcCeeEEc
Q 017176 193 ----LKYEYYYALLRDFPDLTFTLNGGINT------VDEVNAALRKGAHHVMVG 236 (376)
Q Consensus 193 ----~~~~~v~~~~~~~~~ipVi~nGgI~s------~~da~~~l~~Gad~VmiG 236 (376)
..++.+.++++..+++|++..|..+. ...+..+.+.|+|+|.+.
T Consensus 76 ~~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~ 129 (262)
T 2ekc_A 76 IRFEDVLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVP 129 (262)
T ss_dssp CCHHHHHHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECT
T ss_pred CCHHHHHHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEEC
Confidence 01345677777655899999654431 244555666999999984
No 462
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=85.90 E-value=4.9 Score=38.06 Aligned_cols=94 Identities=11% Similarity=0.128 Sum_probs=56.3
Q ss_pred CCCCCEEEEec-------CCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccC
Q 017176 62 PEQHPIVLQIG-------GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN 134 (376)
Q Consensus 62 ~~~~p~~vQL~-------g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~ 134 (376)
..+.|+++=|. |.+.+++.+.++.++++|+|.|++..|.-........ + +..-.+.++.+++.++
T Consensus 217 G~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~--~------~~~~~~~~~~ir~~~~ 288 (349)
T 3hgj_A 217 PRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPL--A------PGFQVPFADAVRKRVG 288 (349)
T ss_dssp CTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCC--C------TTTTHHHHHHHHHHHC
T ss_pred cCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCC--C------ccccHHHHHHHHHHcC
Confidence 45678988776 4568899999999999999999998653221100000 1 1112345666677677
Q ss_pred ccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEE
Q 017176 135 VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII 172 (376)
Q Consensus 135 ~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~v 172 (376)
+||.+- -|+.+ .++. .+++++..+|.|.+
T Consensus 289 iPVi~~--Ggi~t---~e~a----~~~l~~G~aD~V~i 317 (349)
T 3hgj_A 289 LRTGAV--GLITT---PEQA----ETLLQAGSADLVLL 317 (349)
T ss_dssp CEEEEC--SSCCC---HHHH----HHHHHTTSCSEEEE
T ss_pred ceEEEE--CCCCC---HHHH----HHHHHCCCceEEEe
Confidence 888662 22222 3332 23344334998775
No 463
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=85.82 E-value=14 Score=32.69 Aligned_cols=128 Identities=11% Similarity=0.102 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCC--ccHHH
Q 017176 76 LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDH--DSYNQ 153 (376)
Q Consensus 76 ~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~--~~~~~ 153 (376)
.+.+.+-++.++++|+|+|-+-+=.|. +. -|.+.+.+++++.. +.++|.-.- +|.. .+..+
T Consensus 75 ~~~M~~Di~~~~~~GadGvV~G~Lt~d------g~------iD~~~~~~Li~~a~---~~~vTFHRA--FD~~~~~d~~~ 137 (224)
T 2bdq_A 75 LRIMEEDILRAVELESDALVLGILTSN------NH------IDTEAIEQLLPATQ---GLPLVFHMA--FDVIPKSDQKK 137 (224)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCBCTT------SS------BCHHHHHHHHHHHT---TCCEEECGG--GGGSCTTTHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeECCC------CC------cCHHHHHHHHHHhC---CCeEEEECc--hhccCCcCHHH
Confidence 345566677889999999998653222 21 46788888887765 567766432 3433 33333
Q ss_pred HHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEEEecCCCCHHHHHHHHH-cCcC
Q 017176 154 LCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALR-KGAH 231 (376)
Q Consensus 154 ~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~nGgI~s~~da~~~l~-~Gad 231 (376)
.+ ..+ .+.|++.|--||...... ..-..+.++++.+.. .+|-|+.-||| +.+.+.++++ +|++
T Consensus 138 al---e~L-~~lGv~rILTSG~~~~~~----------a~~g~~~L~~Lv~~a~~ri~Im~GgGV-~~~Ni~~l~~~tGv~ 202 (224)
T 2bdq_A 138 SI---DQL-VALGFTRILLHGSSNGEP----------IIENIKHIKALVEYANNRIEIMVGGGV-TAENYQYICQETGVK 202 (224)
T ss_dssp HH---HHH-HHTTCCEEEECSCSSCCC----------GGGGHHHHHHHHHHHTTSSEEEECSSC-CTTTHHHHHHHHTCC
T ss_pred HH---HHH-HHcCCCEEECCCCCCCCc----------HHHHHHHHHHHHHhhCCCeEEEeCCCC-CHHHHHHHHHhhCCC
Confidence 33 333 357999998887643100 011256666665532 36778888888 5567777775 8998
Q ss_pred eeEE
Q 017176 232 HVMV 235 (376)
Q Consensus 232 ~Vmi 235 (376)
-+=.
T Consensus 203 e~H~ 206 (224)
T 2bdq_A 203 QAHG 206 (224)
T ss_dssp EEEE
T ss_pred EEcc
Confidence 7764
No 464
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=85.79 E-value=8.9 Score=33.88 Aligned_cols=130 Identities=7% Similarity=-0.033 Sum_probs=73.9
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecC
Q 017176 64 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI 143 (376)
Q Consensus 64 ~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~ 143 (376)
.-++++|.+.-....+.++.+.+.++|||+||+.... . .++ ..++.+.++.+.+++ .++.++.=...
T Consensus 17 ~~klg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~----~----~~~----~~~~~~~~~~~~l~~-~gl~i~~~~~~ 83 (257)
T 3lmz_A 17 PFHLGMAGYTFVNFDLDTTLKTLERLDIHYLCIKDFH----L----PLN----STDEQIRAFHDKCAA-HKVTGYAVGPI 83 (257)
T ss_dssp SSEEEECGGGGTTSCHHHHHHHHHHTTCCEEEECTTT----S----CTT----CCHHHHHHHHHHHHH-TTCEEEEEEEE
T ss_pred ceEEEEEEEeecCCCHHHHHHHHHHhCCCEEEEeccc----C----CCC----CCHHHHHHHHHHHHH-cCCeEEEEecc
Confidence 4467888765544467888899999999999998541 0 011 234555555555443 35544321111
Q ss_pred CCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE-ec-----CCC
Q 017176 144 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL-NG-----GIN 217 (376)
Q Consensus 144 g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~-nG-----gI~ 217 (376)
.. ...+.+.+. ..++...|+..|.+|.+. -.+..+.+..++. ++.+.. |- -+.
T Consensus 84 -~~--~~~~~~~~~-i~~A~~lGa~~v~~~p~~----------------~~l~~l~~~a~~~-gv~l~lEn~~~~~~~~~ 142 (257)
T 3lmz_A 84 -YM--KSEEEIDRA-FDYAKRVGVKLIVGVPNY----------------ELLPYVDKKVKEY-DFHYAIHLHGPDIKTYP 142 (257)
T ss_dssp -EE--CSHHHHHHH-HHHHHHHTCSEEEEEECG----------------GGHHHHHHHHHHH-TCEEEEECCCTTCSSSC
T ss_pred -cc--CCHHHHHHH-HHHHHHhCCCEEEecCCH----------------HHHHHHHHHHHHc-CCEEEEecCCCcccccC
Confidence 11 223333332 234456899999998531 1255555555543 554432 21 256
Q ss_pred CHHHHHHHHH
Q 017176 218 TVDEVNAALR 227 (376)
Q Consensus 218 s~~da~~~l~ 227 (376)
+.+++.++++
T Consensus 143 ~~~~~~~ll~ 152 (257)
T 3lmz_A 143 DATDVWVHTK 152 (257)
T ss_dssp SHHHHHHHHT
T ss_pred CHHHHHHHHH
Confidence 8888888886
No 465
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=85.78 E-value=1.6 Score=40.32 Aligned_cols=87 Identities=15% Similarity=0.177 Sum_probs=50.0
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEE-EecCCCCHHHHHHHH-
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFT-LNGGINTVDEVNAAL- 226 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi-~nGgI~s~~da~~~l- 226 (376)
+.+.+.+.+..++ +.|++.|.+-|.|......+..+ +.+.+...++.. .++||| +.|+..+.+.++.+.
T Consensus 20 D~~~l~~lv~~li-~~Gv~gl~~~GttGE~~~Ls~~E-------r~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~ 91 (291)
T 3a5f_A 20 DFDKLSELIEWHI-KSKTDAIIVCGTTGEATTMTETE-------RKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKW 91 (291)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEEESSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHH
Confidence 3444444444343 58999999988775432222111 123333333332 268887 556655555544333
Q ss_pred --HcCcCeeEEchHHhhCCc
Q 017176 227 --RKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 227 --~~Gad~VmiGRa~l~~P~ 244 (376)
+.|||+||+-...+..|.
T Consensus 92 a~~~Gadavlv~~P~y~~~s 111 (291)
T 3a5f_A 92 AESIGVDGLLVITPYYNKTT 111 (291)
T ss_dssp HHHTTCSEEEEECCCSSCCC
T ss_pred HHhcCCCEEEEcCCCCCCCC
Confidence 379999999888776663
No 466
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=85.78 E-value=17 Score=33.29 Aligned_cols=123 Identities=17% Similarity=0.098 Sum_probs=74.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHH
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQ 153 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~ 153 (376)
-|.+.+.+-++.+.+.|.|+|=++.. +|+ +.. -..+.-.++++.+++.++- |.+-+ | . .++.+
T Consensus 17 iD~~~l~~lv~~li~~Gv~gl~~~Gt--------tGE-~~~--Ls~eEr~~v~~~~~~~~~g-viaGv--g--~-~~t~~ 79 (293)
T 1w3i_A 17 IDKEKLKIHAENLIRKGIDKLFVNGT--------TGL-GPS--LSPEEKLENLKAVYDVTNK-IIFQV--G--G-LNLDD 79 (293)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESST--------TTT-GGG--SCHHHHHHHHHHHHTTCSC-EEEEC--C--C-SCHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc--------ccC-hhh--CCHHHHHHHHHHHHHHcCC-EEEec--C--C-CCHHH
Confidence 36788889999988999999988642 344 333 3456667788888777644 55432 2 2 23556
Q ss_pred HHHHHHHHhhcCCccEEEEccCccccCC-CCCCCCCCCCcccHHHHHHHHhhCCCCeEEE-e-----cCCCCHHHHHH
Q 017176 154 LCDFIYKVSSLSPTRHFIIHSRKALLNG-ISPAENRTIPPLKYEYYYALLRDFPDLTFTL-N-----GGINTVDEVNA 224 (376)
Q Consensus 154 ~~~~i~~~~e~~Gvd~I~vh~r~~~~~g-~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~-n-----GgI~s~~da~~ 224 (376)
.++. ++.+++.|+|++-+-.- .|.. .+ ...-++++.++.+.. ++||+. | |--.+++.+.+
T Consensus 80 ai~l-a~~A~~~Gadavlv~~P--~y~~~~s-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~ 146 (293)
T 1w3i_A 80 AIRL-AKLSKDFDIVGIASYAP--YYYPRMS-------EKHLVKYFKTLCEVS-PHPVYLYNYPTATGKDIDAKVAKE 146 (293)
T ss_dssp HHHH-HHHGGGSCCSEEEEECC--CSCSSCC-------HHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHH
T ss_pred HHHH-HHHHHhcCCCEEEEcCC--CCCCCCC-------HHHHHHHHHHHHhhC-CCCEEEEECchhhCcCCCHHHHHh
Confidence 6654 45667899999987632 1111 11 011145566666664 788764 4 33346676655
No 467
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=85.75 E-value=2.1 Score=38.44 Aligned_cols=147 Identities=16% Similarity=0.168 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHCCCCEEEecCC--------------------------------------------C--CCccccC-CCC
Q 017176 78 NLAKATELANAYNYDEINLNCG--------------------------------------------C--PSPKVAG-HGC 110 (376)
Q Consensus 78 ~~~~aa~~~~~~G~d~IeiN~g--------------------------------------------c--P~~~v~r-~g~ 110 (376)
+..++|..++++|+|+|-+|.- | |-+..-. +++
T Consensus 26 dpv~aA~~ae~aGAdgITvHlReDrRHI~d~Dv~~L~~~~~~~lNlE~a~t~emi~ia~~~kP~~vtLVPE~r~e~TTeg 105 (243)
T 1m5w_A 26 DPVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEKRQEVTTEG 105 (243)
T ss_dssp CHHHHHHHHHTTTCSEEEEECCTTCSSSCHHHHHHHHHHCSSEEEEEECSSHHHHHHHHHHCCSEEEECCCCSSCSSCCS
T ss_pred CHHHHHHHHHHcCCCEEEeCCCCCcccCCHHHHHHHHHhcCCCEEeccCCCHHHHHHHHHcCCCEEEECCCCCCCcCCCc
Confidence 4567888999999999998753 1 2111112 333
Q ss_pred ccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCC
Q 017176 111 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTI 190 (376)
Q Consensus 111 yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~ 190 (376)
|-.+..+.+.+.++++.+++ .++.|++-+-+ +.+. ++ ...+.|++.|.+|.+.-.... ...+ .
T Consensus 106 -Gldv~~~~~~l~~~i~~L~~-~GIrVSLFIDp------d~~q-i~----aA~~~GA~~IELhTG~Ya~a~-~~~~-~-- 168 (243)
T 1m5w_A 106 -GLDVAGQRDKMRDACKRLAD-AGIQVSLFIDA------DEEQ-IK----AAAEVGAPFIEIHTGCYADAK-TDAE-Q-- 168 (243)
T ss_dssp -CCCSGGGHHHHHHHHHHHHH-TTCEEEEEECS------CHHH-HH----HHHHTTCSEEEEECHHHHHCC-SHHH-H--
T ss_pred -chhHHhhHHHHHHHHHHHHH-CCCEEEEEeCC------CHHH-HH----HHHHhCcCEEEEechhhhcCC-Cchh-H--
Confidence 76777889999999999876 47777775433 1222 22 234699999999976421110 0000 0
Q ss_pred CcccHHHHH---HHHhhCCCCeEEEecCCCCHHHHHHHHH-cCcCeeEEchHHhhCCc
Q 017176 191 PPLKYEYYY---ALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 191 ~~~~~~~v~---~~~~~~~~ipVi~nGgI~s~~da~~~l~-~Gad~VmiGRa~l~~P~ 244 (376)
..-++.+. +...+. ++-|=+--|+ |.+.+..+.. .+..=|-||.+++.+--
T Consensus 169 -~~el~~i~~aa~~A~~l-GL~VnAGHgL-~y~Nv~~ia~ip~i~ElnIGHaiia~Al 223 (243)
T 1m5w_A 169 -AQELARIAKAATFAASL-GLKVNAGHGL-TYHNVKAIAAIPEMHELNIGHAIIGRAV 223 (243)
T ss_dssp -HHHHHHHHHHHHHHHHT-TCEEEEESSC-CTTTHHHHHTCTTEEEEEECHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHc-CCEEecCCCC-CHHHHHHHhhCCCCeEEccCHHHHHHHH
Confidence 00022222 222232 6767666666 5666665555 67888999999887654
No 468
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=85.75 E-value=1.8 Score=40.00 Aligned_cols=69 Identities=7% Similarity=0.014 Sum_probs=45.9
Q ss_pred HHhhcCCccEEEEccCc----cccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHHcCcCeeEE
Q 017176 160 KVSSLSPTRHFIIHSRK----ALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 235 (376)
Q Consensus 160 ~~~e~~Gvd~I~vh~r~----~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~~Gad~Vmi 235 (376)
+.++++|++.|++-... ....|.. .....+.+.++++.. ++|++.+.++.+.++++.+++.|||+| .
T Consensus 35 ~~~~~~Ga~~i~~~e~v~~~~~~~~G~~-------~~~~~~~i~~i~~~~-~~Pvi~~~~~~~~~~~~~~~~aGad~v-~ 105 (297)
T 2zbt_A 35 VIAEEAGAVAVMALERVPADIRAQGGVA-------RMSDPKIIKEIMAAV-SIPVMAKVRIGHFVEAMILEAIGVDFI-D 105 (297)
T ss_dssp HHHHHHTCSEEEECSSCHHHHHHTTCCC-------CCCCHHHHHHHHTTC-SSCEEEEEETTCHHHHHHHHHTTCSEE-E
T ss_pred HHHHHCCCcEEEeccccchHHHhhcCCc-------cCCCHHHHHHHHHhc-CCCeEEEeccCCHHHHHHHHHCCCCEE-e
Confidence 34457899998772111 0111211 011256777777654 899999988888899999999999999 4
Q ss_pred ch
Q 017176 236 GR 237 (376)
Q Consensus 236 GR 237 (376)
+.
T Consensus 106 ~~ 107 (297)
T 2zbt_A 106 ES 107 (297)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 469
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=85.74 E-value=3 Score=38.83 Aligned_cols=82 Identities=17% Similarity=0.267 Sum_probs=0.0
Q ss_pred CCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCC-CCeEEEecCCCCHHHHHH
Q 017176 146 DDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNA 224 (376)
Q Consensus 146 ~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi~nGgI~s~~da~~ 224 (376)
+..-+++.+.+.+..+++ .|++.|.+-|.|......+..+. .+.+..+++... ++|||+.-|-.+.+++.+
T Consensus 29 dg~iD~~~l~~lv~~li~-~Gv~Gl~v~GtTGE~~~Ls~~Er-------~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~ 100 (307)
T 3s5o_A 29 TAEVDYGKLEENLHKLGT-FPFRGFVVQGSNGEFPFLTSSER-------LEVVSRVRQAMPKNRLLLAGSGCESTQATVE 100 (307)
T ss_dssp TSCBCHHHHHHHHHHHTT-SCCSEEEESSGGGTGGGSCHHHH-------HHHHHHHHHTSCTTSEEEEECCCSSHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHH-cCCCEEEECccccchhhCCHHHH-------HHHHHHHHHHcCCCCcEEEecCCCCHHHHHH
Q ss_pred HHH----cCcCeeEE
Q 017176 225 ALR----KGAHHVMV 235 (376)
Q Consensus 225 ~l~----~Gad~Vmi 235 (376)
..+ .|||+||+
T Consensus 101 la~~A~~~Gadavlv 115 (307)
T 3s5o_A 101 MTVSMAQVGADAAMV 115 (307)
T ss_dssp HHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCEEEE
No 470
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=85.66 E-value=1.6 Score=40.46 Aligned_cols=86 Identities=14% Similarity=0.146 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEEEe-cCCCCHHHHHHHH--
Q 017176 151 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLN-GGINTVDEVNAAL-- 226 (376)
Q Consensus 151 ~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~n-GgI~s~~da~~~l-- 226 (376)
++.+.+.+..+ .+.|++.|.+-|.|......+..+ +.+.+...++.. .++|||+. |...+.+.++.+.
T Consensus 22 ~~~l~~lv~~l-i~~Gv~gl~v~GttGE~~~Lt~~E-------r~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a 93 (292)
T 3daq_A 22 LEALKAHVNFL-LENNAQAIIVNGTTAESPTLTTDE-------KELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQA 93 (292)
T ss_dssp HHHHHHHHHHH-HHTTCCEEEESSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHcCCCEEEECccccccccCCHHH-------HHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHH
Confidence 33444444433 368999999988765332222110 123333333332 36898865 4444444433322
Q ss_pred -HcCcCeeEEchHHhhCCc
Q 017176 227 -RKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 227 -~~Gad~VmiGRa~l~~P~ 244 (376)
+.|||+||+-...+..|.
T Consensus 94 ~~~Gadavlv~~P~y~~~~ 112 (292)
T 3daq_A 94 KALGADAIMLITPYYNKTN 112 (292)
T ss_dssp HHHTCSEEEEECCCSSCCC
T ss_pred HHcCCCEEEECCCCCCCCC
Confidence 279999999888777664
No 471
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=85.55 E-value=7.3 Score=36.55 Aligned_cols=140 Identities=11% Similarity=0.218 Sum_probs=80.9
Q ss_pred CCCEEEEecC-CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEec
Q 017176 64 QHPIVLQIGG-SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 142 (376)
Q Consensus 64 ~~p~~vQL~g-~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR 142 (376)
..|++++|=+ .+.+. ++.+.++||+-|.+-.+ . -.++.+.+...++++...+ .++.|-.-+-
T Consensus 75 ~VPValHlDHg~~~e~----i~~ai~~GFtSVMiDgS-~-----------~p~eENi~~Tk~vv~~ah~-~gvsVEaELG 137 (323)
T 2isw_A 75 DIPICIHLDHGDTLES----VKMAIDLGFSSVMIDAS-H-----------HPFDENVRITKEVVAYAHA-RSVSVEAELG 137 (323)
T ss_dssp TSCEEEEEEEECSHHH----HHHHHHTTCSEEEECCT-T-----------SCHHHHHHHHHHHHHHHHT-TTCEEEEEES
T ss_pred CCcEEEECCCCCCHHH----HHHHHHcCCCeEEecCC-C-----------CCHHHHHHHHHHHHHHHHH-cCCeEEEEeC
Confidence 4456555533 23322 33445567777666432 1 1234566777777777654 2433333221
Q ss_pred -C-CCCC-------CccHHHHHHHHHHHhhcCCccEEEEccCccc--cCCCCCCCCCCCCc--ccHHHHHHHHhhCCCCe
Q 017176 143 -I-GVDD-------HDSYNQLCDFIYKVSSLSPTRHFIIHSRKAL--LNGISPAENRTIPP--LKYEYYYALLRDFPDLT 209 (376)
Q Consensus 143 -~-g~~~-------~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~--~~g~~~~~~~~~~~--~~~~~v~~~~~~~~~ip 209 (376)
+ |.++ ..+.++..+|+ ++.|+|.|.+.=++.. |+..+ .+. ++++.+.++.+.. ++|
T Consensus 138 ~vgg~Ed~v~~~~~yTdPeea~~Fv----~~TgvD~LAvaiGt~HG~Yk~~~------~p~~~L~~~~L~~I~~~~-~vp 206 (323)
T 2isw_A 138 TLGGIEEDVQNTVQLTEPQDAKKFV----ELTGVDALAVAIGTSHGAYKFKS------ESDIRLAIDRVKTISDLT-GIP 206 (323)
T ss_dssp CC----------CCCCCHHHHHHHH----HHHCCSEEEECSSCCSSSBCCCC----------CCCCHHHHHHHHHH-CSC
T ss_pred CccCCccCcccccccCCHHHHHHHH----HHHCCCEEEEecCccccccCCCC------CcccccCHHHHHHHHHHh-CCC
Confidence 1 1121 13466666654 4689999998766642 22101 134 6788888887765 899
Q ss_pred EEEecCCCCHHHHHHHHH-cCcC
Q 017176 210 FTLNGGINTVDEVNAALR-KGAH 231 (376)
Q Consensus 210 Vi~nGgI~s~~da~~~l~-~Gad 231 (376)
++.-|+=.-+++..+.+. .|-+
T Consensus 207 LVlHGgSsvp~~~~~~~~~~gg~ 229 (323)
T 2isw_A 207 LVMHGSSSVPKDVKDMINKYGGK 229 (323)
T ss_dssp EEECSCCCCCHHHHHHHHHTTCC
T ss_pred eEEECCCCCCHHHHHHHHHhccc
Confidence 999999988998888887 6654
No 472
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=85.40 E-value=1.7 Score=41.24 Aligned_cols=87 Identities=9% Similarity=0.075 Sum_probs=50.7
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEE-EecCCCCHHHHHHHH-
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFT-LNGGINTVDEVNAAL- 226 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi-~nGgI~s~~da~~~l- 226 (376)
+++.+.+.+..++ +.|++.|.+-|.|......+.. -+.+.+..+++.. .++||| +.|+..+.+.++.+.
T Consensus 50 D~~~l~~lv~~li-~~Gv~Gl~v~GtTGE~~~Ls~e-------Er~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~ 121 (343)
T 2v9d_A 50 DKPGTAALIDDLI-KAGVDGLFFLGSGGEFSQLGAE-------ERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQH 121 (343)
T ss_dssp CHHHHHHHHHHHH-HTTCSCEEESSTTTTGGGSCHH-------HHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEeCccccChhhCCHH-------HHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHH
Confidence 4444444444444 5899999998877543222211 1123333333332 368887 456665555544333
Q ss_pred --HcCcCeeEEchHHhhCCc
Q 017176 227 --RKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 227 --~~Gad~VmiGRa~l~~P~ 244 (376)
+.|||+||+-...+..|.
T Consensus 122 A~~~Gadavlv~~P~Y~~~s 141 (343)
T 2v9d_A 122 AQQAGADGIVVINPYYWKVS 141 (343)
T ss_dssp HHHHTCSEEEEECCSSSCCC
T ss_pred HHhcCCCEEEECCCCCCCCC
Confidence 379999999988876663
No 473
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=85.34 E-value=15 Score=33.56 Aligned_cols=122 Identities=12% Similarity=0.064 Sum_probs=73.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHH
Q 017176 75 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQL 154 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~ 154 (376)
|.+.+.+-++.+.+.|.|+|=++.. +|+ +..| ..+.-.++++.+.+.++- |.+-+ .. .+..+.
T Consensus 17 D~~~l~~lv~~li~~Gv~gl~v~Gt--------tGE-~~~L--s~~Er~~v~~~~~~~~~g-vi~Gv----g~-~~t~~a 79 (286)
T 2r91_A 17 DPELFANHVKNITSKGVDVVFVAGT--------TGL-GPAL--SLQEKMELTDAATSAARR-VIVQV----AS-LNADEA 79 (286)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETST--------TTT-GGGS--CHHHHHHHHHHHHHHCSS-EEEEC----CC-SSHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcc--------ccC-hhhC--CHHHHHHHHHHHHHHhCC-EEEee----CC-CCHHHH
Confidence 6788888899888999999988642 344 3333 455556677777666543 55532 22 234555
Q ss_pred HHHHHHHhhcCCccEEEEccCccccCC-CCCCCCCCCCcccHHHHHHHHhhCCCCeEEE-e-----cCCCCHHHHHH
Q 017176 155 CDFIYKVSSLSPTRHFIIHSRKALLNG-ISPAENRTIPPLKYEYYYALLRDFPDLTFTL-N-----GGINTVDEVNA 224 (376)
Q Consensus 155 ~~~i~~~~e~~Gvd~I~vh~r~~~~~g-~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~-n-----GgI~s~~da~~ 224 (376)
++. ++.+++.|+|++-+-.- .+.. .+ ...-++++.++.+.. ++||+. | |--.+++.+.+
T Consensus 80 i~l-a~~A~~~Gadavlv~~P--~y~~~~s-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~ 145 (286)
T 2r91_A 80 IAL-AKYAESRGAEAVASLPP--YYFPRLS-------ERQIAKYFRDLCSAV-SIPVFLYNYPAAVGRDVDARAAKE 145 (286)
T ss_dssp HHH-HHHHHHTTCSEEEECCS--CSSTTCC-------HHHHHHHHHHHHHHC-SSCEEEEECHHHHSSCCCHHHHHH
T ss_pred HHH-HHHHHhcCCCEEEEcCC--cCCCCCC-------HHHHHHHHHHHHHhc-CCCEEEEeChhhcCCCCCHHHHHh
Confidence 554 44567899999988642 1111 11 011245666777664 788864 4 33357777666
No 474
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=85.23 E-value=1.6 Score=40.33 Aligned_cols=87 Identities=13% Similarity=0.142 Sum_probs=49.5
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEEE-ecCCCCHHHHHHHH-
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTL-NGGINTVDEVNAAL- 226 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~-nGgI~s~~da~~~l- 226 (376)
+++.+.+.+..++ +.|++.|.+-|.|......+..+ +.+.+...++.. .++|||+ .|+..+.+.++.+.
T Consensus 20 D~~~l~~lv~~li-~~Gv~gl~~~GttGE~~~Ls~~E-------r~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~ 91 (291)
T 3tak_A 20 DWKSLEKLVEWHI-EQGTNSIVAVGTTGEASTLSMEE-------HTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKA 91 (291)
T ss_dssp CHHHHHHHHHHHH-HHTCCEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECccccccccCCHHH-------HHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHH
Confidence 3444444444443 68999999988765432222111 123333333332 3689875 45555544443322
Q ss_pred --HcCcCeeEEchHHhhCCc
Q 017176 227 --RKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 227 --~~Gad~VmiGRa~l~~P~ 244 (376)
+.|||+||+-...+..|.
T Consensus 92 a~~~Gadavlv~~P~y~~~~ 111 (291)
T 3tak_A 92 AKDLGADAALLVTPYYNKPT 111 (291)
T ss_dssp HHHHTCSEEEEECCCSSCCC
T ss_pred HHhcCCCEEEEcCCCCCCCC
Confidence 379999999988877664
No 475
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=85.07 E-value=5.6 Score=38.33 Aligned_cols=129 Identities=7% Similarity=-0.063 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc--CccEEEEecCCCCCCccHHH
Q 017176 76 LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQ 153 (376)
Q Consensus 76 ~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 153 (376)
++++.+.|+...+.||..+-+..|.+.... +. ..+++.-.+.+++||+.+ +.++.|-..-+|+ .++
T Consensus 149 ~e~~~~~a~~~~~~Gf~~~KlKvg~~~~~~---~~-----~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~w~----~~~ 216 (392)
T 3v5c_A 149 VALMQEEAMQGYAKGQRHFKIKVGRGGRHM---PL-----WEGTKRDIAIVRGISEVAGPAGKIMIDANNAYN----LNL 216 (392)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCTTTTTS---CH-----HHHHHHHHHHHHHHHHHHCTTCCEEEECTTCCC----HHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCccc---cc-----cccHHHHHHHHHHHHHHcCCCCcEEeeCCCCcC----HHH
Confidence 466777777777889999999876532100 00 012456677888888865 5667776666664 334
Q ss_pred HHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhh----CCCCeEEEecCCCCHHHHHHHHH-c
Q 017176 154 LCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD----FPDLTFTLNGGINTVDEVNAALR-K 228 (376)
Q Consensus 154 ~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~----~~~ipVi~nGgI~s~~da~~~l~-~ 228 (376)
.+++ .+.+++.++.+|. . .++ .+++.++++.+. ...+||...=.+. ..++.++++ .
T Consensus 217 A~~~-~~~L~~~~l~~iE----e------------P~~-~d~~~~~~l~~~~~~~~~~ipIa~gE~~~-~~~~~~li~~~ 277 (392)
T 3v5c_A 217 TKEV-LAALSDVNLYWLE----A------------AFH-EDEALYEDLKEWLGQRGQNVLIADGEGLA-SPHLIEWATRG 277 (392)
T ss_dssp HHHH-HHHTTTSCCCEEE----C------------SSS-CCHHHHHHHHHHHHHHTCCCEEEECCSSC-CTTHHHHHHTT
T ss_pred HHHH-HHhcccCCCeEEe----C------------CCC-cCHHHHHHHHHhhccCCCCCcEECCCccc-HHHHHHHHHcC
Confidence 4444 4456777777765 1 011 124555555543 1367866655666 778888888 4
Q ss_pred CcCeeEE
Q 017176 229 GAHHVMV 235 (376)
Q Consensus 229 Gad~Vmi 235 (376)
.+|.|++
T Consensus 278 a~dii~~ 284 (392)
T 3v5c_A 278 RVDVLQY 284 (392)
T ss_dssp SCCEECC
T ss_pred CCcEEEe
Confidence 5888765
No 476
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=85.07 E-value=8.9 Score=37.73 Aligned_cols=123 Identities=7% Similarity=0.003 Sum_probs=75.6
Q ss_pred CCHHHHHHHHHHHHH-CCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhccc-CccEEEEecCCCCCCccH
Q 017176 74 SNLDNLAKATELANA-YNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSY 151 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~-~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~-~~pv~vKiR~g~~~~~~~ 151 (376)
.+|+++++.|+.+.+ .||..+-+..|.+ +++.-.+.|++||+.. ++.+.|-..-+|+ .
T Consensus 184 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~----------------~~~~Di~~v~avRea~pd~~L~vDaN~~w~----~ 243 (455)
T 3pfr_A 184 MDTQAVIELAAASKDRYGFKDFKLKGGVF----------------EGSKEIDTVIELKKHFPDARITLDPNGCWS----L 243 (455)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSS----------------CHHHHHHHHHHHHHHCTTCCEEEECTTBSC----H
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEcCCCC----------------CHHHHHHHHHHHHHhCCCCeEeecCCCCCC----H
Confidence 478999888887654 6999998865432 2233356677777765 4455554444453 4
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCccc----HHHHHHHHhhCCCCeEEEecCCCCHHHHHHHHH
Q 017176 152 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK----YEYYYALLRDFPDLTFTLNGGINTVDEVNAALR 227 (376)
Q Consensus 152 ~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~----~~~v~~~~~~~~~ipVi~nGgI~s~~da~~~l~ 227 (376)
++.+++ .+.+++. +.+|. . .+++-+ ++.++++.+.. ++||.+.=.+.+..++.++++
T Consensus 244 ~~A~~~-~~~L~~~-l~~iE----e------------P~~~~d~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~ 304 (455)
T 3pfr_A 244 DEAIQL-CKGLNDV-LTYAE----D------------PCIGENGYSGREIMAEFRRRT-GIPTATNMIATNWREMCHAIM 304 (455)
T ss_dssp HHHHHH-HTTCTTT-CSEEE----S------------CBCCBTTBCHHHHHHHHHHHH-CCCEEESSSCCSHHHHHHHHH
T ss_pred HHHHHH-HHhhccc-ceeee----c------------CCChhhccchHHHHHHHHhcC-CCCEEeCCCcCCHHHHHHHHH
Confidence 444443 3344444 54443 0 111212 45666776654 799888656788999999998
Q ss_pred -cCcCeeEE
Q 017176 228 -KGAHHVMV 235 (376)
Q Consensus 228 -~Gad~Vmi 235 (376)
..+|.+++
T Consensus 305 ~~a~di~~~ 313 (455)
T 3pfr_A 305 LQSVDIPLA 313 (455)
T ss_dssp HTCCSEEBC
T ss_pred cCCCCEEEe
Confidence 45787654
No 477
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=85.01 E-value=1.5 Score=44.34 Aligned_cols=105 Identities=9% Similarity=0.048 Sum_probs=61.5
Q ss_pred CHHHHHHHHHHHHHCC-----CCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhc-----ccCccEEEEecCC
Q 017176 75 NLDNLAKATELANAYN-----YDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAA-----NTNVPVSVKCRIG 144 (376)
Q Consensus 75 ~~~~~~~aa~~~~~~G-----~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~-----~~~~pv~vKiR~g 144 (376)
+.+...+.|+...+.| +|.|||++-+. |.|.-.-+.....+.+..+|+++++ ..++|++|-+.-
T Consensus 247 ~~~~al~~a~~mv~~G~~~~~AdIIDIGgeST-----RPGa~~vs~eEEl~RvvpvI~~i~~~~~~~~~~vpISIDT~~- 320 (545)
T 2bmb_A 247 DIESQLNDIIKLCKDALYLHESVIIDVGGCST-----RPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSIDTYR- 320 (545)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSCEEEEEECSCC-----STTCCCCCHHHHHHHHHHHHHHHHHCSSSCGGGEEEEEECCC-
T ss_pred CHHHHHHHHHHHHHcCCCCCCceEEEECCCCC-----CCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCc-
Confidence 6777777777777789 99999986332 2221122233455667778888875 247788873221
Q ss_pred CCCCccHHHHHHHHHHHhhcCCccEEE-EccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEe
Q 017176 145 VDDHDSYNQLCDFIYKVSSLSPTRHFI-IHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN 213 (376)
Q Consensus 145 ~~~~~~~~~~~~~i~~~~e~~Gvd~I~-vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~n 213 (376)
.++++ .+-++|++.|. |+|... + + .+..++++.|++|+|..
T Consensus 321 -------a~Vae----aAl~aGadIINDVsg~~~--------d----~-----~m~~vva~~~~~~vVlm 362 (545)
T 2bmb_A 321 -------SNVAK----EAIKVGVDIINDISGGLF--------D----S-----NMFAVIAENPEICYILS 362 (545)
T ss_dssp -------HHHHH----HHHHTTCCEEEETTTTSS--------C----T-----THHHHHHTCTTSEEEEE
T ss_pred -------HHHHH----HHHHcCCCEEEeCCCCcC--------C----h-----HHHHHHHHhCCCeEEEE
Confidence 12222 22257999885 555431 0 0 12244555667888876
No 478
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=84.92 E-value=1.6 Score=40.65 Aligned_cols=86 Identities=14% Similarity=0.093 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEE-EecCCCCHHHHHHHH--
Q 017176 151 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFT-LNGGINTVDEVNAAL-- 226 (376)
Q Consensus 151 ~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi-~nGgI~s~~da~~~l-- 226 (376)
++.+.+.+..++ +.|++.|.+-|.|......+..+ +.+.+...++.. .++||| +.|+..+.+.++.+.
T Consensus 20 ~~~l~~lv~~li-~~Gv~gi~v~GttGE~~~Ls~~E-------r~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A 91 (297)
T 2rfg_A 20 EKALAGLVDWQI-KHGAHGLVPVGTTGESPTLTEEE-------HKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHA 91 (297)
T ss_dssp HHHHHHHHHHHH-HTTCSEEECSSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HcCCCEEEECccccchhhCCHHH-------HHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHH
Confidence 444444444333 58999999988765432222111 123333333332 268886 566665555544333
Q ss_pred -HcCcCeeEEchHHhhCCc
Q 017176 227 -RKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 227 -~~Gad~VmiGRa~l~~P~ 244 (376)
+.|||+||+-...+..|.
T Consensus 92 ~~~Gadavlv~~P~y~~~s 110 (297)
T 2rfg_A 92 QQAGADAVLCVAGYYNRPS 110 (297)
T ss_dssp HHHTCSEEEECCCTTTCCC
T ss_pred HhcCCCEEEEcCCCCCCCC
Confidence 379999999988877664
No 479
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=84.76 E-value=1.2 Score=42.73 Aligned_cols=71 Identities=14% Similarity=0.212 Sum_probs=46.6
Q ss_pred HHhhcCCccEEEEccCccccCCCCCCCCCCCCcccH-HHHHHHHhhCCCCeEEEecCC---CCHHHHHHHHHcCcCeeEE
Q 017176 160 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY-EYYYALLRDFPDLTFTLNGGI---NTVDEVNAALRKGAHHVMV 235 (376)
Q Consensus 160 ~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~-~~v~~~~~~~~~ipVi~nGgI---~s~~da~~~l~~Gad~Vmi 235 (376)
++.+..|+|++.+|--..... ..+...... -.| +.+.++++.. ++||++=| | .+++++..+.+.|||+|.+
T Consensus 162 ~~ve~~~adal~ihln~~qe~-~~p~Gd~~~--~~~~~~I~~l~~~~-~~PVivK~-vg~g~s~e~A~~l~~aGad~I~V 236 (365)
T 3sr7_A 162 QAVRDLQPLFLQVHINLMQEL-LMPEGEREF--RSWKKHLSDYAKKL-QLPFILKE-VGFGMDVKTIQTAIDLGVKTVDI 236 (365)
T ss_dssp HHHHHHCCSCEEEEECHHHHH-TSSSSCCCC--HHHHHHHHHHHHHC-CSCEEEEE-CSSCCCHHHHHHHHHHTCCEEEC
T ss_pred HHHHhcCCCEEEEeccccccc-cCCCCCCcH--HHHHHHHHHHHHhh-CCCEEEEE-CCCCCCHHHHHHHHHcCCCEEEE
Confidence 344567999999986532000 000000110 023 5677887765 89998874 6 7999999999999999988
No 480
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=84.59 E-value=24 Score=32.29 Aligned_cols=153 Identities=12% Similarity=0.113 Sum_probs=94.3
Q ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 62 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 62 ~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
....|+++.+.+++.++-.+.++.++++|+|++-+. .|... + ...+-+.+-.++|.+++++|+.+--
T Consensus 67 ~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~--~P~y~--~---------~s~~~l~~~f~~ia~a~~lPiilYn 133 (292)
T 2vc6_A 67 NGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIV--SPYYN--K---------PTQEGIYQHFKAIDAASTIPIIVYN 133 (292)
T ss_dssp TTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEE--CCCSS--C---------CCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEc--CCCCC--C---------CCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 356799999999999999999999999999999885 34321 1 1346677777888888899998753
Q ss_pred ---cCCCCCCccHHHHHHHHHHHhh-cCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCC-CCeEEEecCC
Q 017176 142 ---RIGVDDHDSYNQLCDFIYKVSS-LSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGI 216 (376)
Q Consensus 142 ---R~g~~~~~~~~~~~~~i~~~~e-~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi~nGgI 216 (376)
|.|.+- +.+.+ .++.+ .-.+-.|--..+. ...+.++++..+ ++.| .+|+=
T Consensus 134 ~P~~tg~~l--~~~~~----~~La~~~pnIvgiK~s~gd------------------~~~~~~~~~~~~~~f~v-~~G~d 188 (292)
T 2vc6_A 134 IPGRSAIEI--HVETL----ARIFEDCPNVKGVXDATGN------------------LLRPSLERMACGEDFNL-LTGED 188 (292)
T ss_dssp CHHHHSCCC--CHHHH----HHHHHHCTTEEEEEECSCC------------------THHHHHHHHHSCTTSEE-EESCG
T ss_pred CccccCcCC--CHHHH----HHHHhhCCCEEEEecCCCC------------------HHHHHHHHHHcCCCEEE-EECch
Confidence 233332 22222 23333 2234443322211 334445555443 4555 46631
Q ss_pred CCHHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhC
Q 017176 217 NTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYG 256 (376)
Q Consensus 217 ~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g 256 (376)
+.+...+..|++|++.+.+-+ -|..+.+.++....|
T Consensus 189 ---~~~~~~l~~G~~G~is~~~n~-~P~~~~~l~~a~~~G 224 (292)
T 2vc6_A 189 ---GTALGYMAHGGHGCISVTANV-APALCADFQQACLNG 224 (292)
T ss_dssp ---GGHHHHHHTTCCEEEESGGGT-CHHHHHHHHHHHHTT
T ss_pred ---HHHHHHHHcCCCEEEecHHHh-CHHHHHHHHHHHHCC
Confidence 234556778999999988765 477765544444445
No 481
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=84.40 E-value=8.5 Score=34.96 Aligned_cols=123 Identities=11% Similarity=0.121 Sum_probs=70.7
Q ss_pred HHHHHH-hCCCcEEEecceeecccccccc-hhhhhhc-cCCCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCC
Q 017176 25 RTLARL-ISKHAWLYTEMLAAETIIYQQG-NLDRFLA-FSPEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCP 101 (376)
Q Consensus 25 r~~~~~-~Gg~gl~~te~v~~~~~~~~~~-~~~~~~~-~~~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP 101 (376)
.+++|+ .+|..++=.|.++.+.....+. .+.+..+ ..+++- .++=.+..++ ..+++++++|++.| .-.|.|
T Consensus 93 a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf-~Vlpy~~dd~----~~akrl~~~G~~aV-mPlg~p 166 (265)
T 1wv2_A 93 CRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGF-DVMVYTSDDP----IIARQLAEIGCIAV-MPLAGL 166 (265)
T ss_dssp HHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTC-EEEEEECSCH----HHHHHHHHSCCSEE-EECSSS
T ss_pred HHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCC-EEEEEeCCCH----HHHHHHHHhCCCEE-EeCCcc
Confidence 346788 8888899899888776544332 1111111 222333 3333355665 47788899999999 444555
Q ss_pred CccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccC
Q 017176 102 SPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR 175 (376)
Q Consensus 102 ~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r 175 (376)
.. + |..+ .+++++..++ +..++||.+.=.+ .. .++.. +.+ +.|+|.+.|-..
T Consensus 167 IG----s---G~Gi-~~~~lI~~I~----e~~~vPVI~eGGI--~T---PsDAa----~Am-eLGAdgVlVgSA 218 (265)
T 1wv2_A 167 IG----S---GLGI-CNPYNLRIIL----EEAKVPVLVDAGV--GT---ASDAA----IAM-ELGCEAVLMNTA 218 (265)
T ss_dssp TT----C---CCCC-SCHHHHHHHH----HHCSSCBEEESCC--CS---HHHHH----HHH-HHTCSEEEESHH
T ss_pred CC----C---CCCc-CCHHHHHHHH----hcCCCCEEEeCCC--CC---HHHHH----HHH-HcCCCEEEEChH
Confidence 32 2 2223 3566665444 4467899885444 22 33332 233 479999988643
No 482
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=84.25 E-value=3.3 Score=37.99 Aligned_cols=110 Identities=15% Similarity=0.143 Sum_probs=59.9
Q ss_pred HHHHHHHHhcccCccEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEccC--ccccCCCCC--------CCCCCCC
Q 017176 122 VGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR--KALLNGISP--------AENRTIP 191 (376)
Q Consensus 122 ~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r--~~~~~g~~~--------~~~~~~~ 191 (376)
+.+..+.+++.-...+..-+..|+.+.+ ...+.+ +.++++|+|.|.+--- .+...|..- ..+-. .
T Consensus 7 i~~~f~~~~~~~~~ali~yi~aGdP~~~---~~~~~~-~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~-~ 81 (271)
T 3nav_A 7 YQALFQRLSAAQQGAFVPFVTIGDPNPE---QSLAIM-QTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTT-P 81 (271)
T ss_dssp HHHHHHHHHHTTBCEEEEEEETTSSCHH---HHHHHH-HHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCC-H
T ss_pred HHHHHHHHHhcCCCeEEEEEeCCCCCHH---HHHHHH-HHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCC-H
Confidence 4455566554434456666677876543 344433 3456799999987521 111111000 00000 0
Q ss_pred cccHHHHHHHHhhCCCCeEEEecCCC-----CHH-HHHHHHHcCcCeeEEc
Q 017176 192 PLKYEYYYALLRDFPDLTFTLNGGIN-----TVD-EVNAALRKGAHHVMVG 236 (376)
Q Consensus 192 ~~~~~~v~~~~~~~~~ipVi~nGgI~-----s~~-da~~~l~~Gad~VmiG 236 (376)
.-.++.+.+++++.+++||+..|-.+ ..+ -++++.+.|+|+|.+.
T Consensus 82 ~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIip 132 (271)
T 3nav_A 82 DICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIA 132 (271)
T ss_dssp HHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEEC
Confidence 01156677777665689999876432 223 3455556999999994
No 483
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=84.11 E-value=0.69 Score=46.38 Aligned_cols=63 Identities=14% Similarity=0.121 Sum_probs=45.3
Q ss_pred hcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCC-CeEEEecCCCCHHHHHHHHHcCcCeeEEchH
Q 017176 163 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPD-LTFTLNGGINTVDEVNAALRKGAHHVMVGRA 238 (376)
Q Consensus 163 e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~-ipVi~nGgI~s~~da~~~l~~Gad~VmiGRa 238 (376)
.+.|++.+.++.... .. ...++.+..+++..++ +||+ .|+|.+.+++..+.+.|+|+|.+|.+
T Consensus 251 ~e~gv~~l~Vd~~~g----~~--------~~~~~~i~~lk~~~~~~~~Vi-~G~V~t~~~a~~l~~aGad~I~Vg~~ 314 (503)
T 1me8_A 251 VEAGADVLCIDSSDG----FS--------EWQKITIGWIREKYGDKVKVG-AGNIVDGEGFRYLADAGADFIKIGIG 314 (503)
T ss_dssp HHHTCSEEEECCSCC----CS--------HHHHHHHHHHHHHHGGGSCEE-EEEECSHHHHHHHHHHTCSEEEECSS
T ss_pred HhhhccceEEecccC----cc--------cchhhHHHHHHHhCCCCceEe-eccccCHHHHHHHHHhCCCeEEeccc
Confidence 356999998875321 10 1125556666666556 7877 69999999999999999999988763
No 484
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=84.07 E-value=5.1 Score=36.39 Aligned_cols=45 Identities=16% Similarity=0.091 Sum_probs=29.5
Q ss_pred HHHHHHHhhCCCCeEEEecCCC-----C-HHHHHHHHHcCcCeeEEchHHh
Q 017176 196 EYYYALLRDFPDLTFTLNGGIN-----T-VDEVNAALRKGAHHVMVGRAAY 240 (376)
Q Consensus 196 ~~v~~~~~~~~~ipVi~nGgI~-----s-~~da~~~l~~Gad~VmiGRa~l 240 (376)
+.+.++++..+++||++.+..+ . ...+..+.+.|+|+|.+--...
T Consensus 83 ~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~ 133 (268)
T 1qop_A 83 EMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPV 133 (268)
T ss_dssp HHHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCG
T ss_pred HHHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCH
Confidence 5567777764689998754322 1 3455666669999999864433
No 485
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=84.02 E-value=2.7 Score=40.19 Aligned_cols=87 Identities=11% Similarity=0.025 Sum_probs=49.7
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEEE-ecCCCCHHHHHHHH-
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTL-NGGINTVDEVNAAL- 226 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~-nGgI~s~~da~~~l- 226 (376)
+.+.+.+.+..+ .+.|++.|.+-|.|......+.. -+.+.+...++.. .++|||+ .|+..+.+.++.+.
T Consensus 78 D~~al~~lv~~l-i~~Gv~Gl~v~GTTGE~~~Ls~e-------Er~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~ 149 (360)
T 4dpp_A 78 DLEAYDDLVNIQ-IQNGAEGVIVGGTTGEGQLMSWD-------EHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQ 149 (360)
T ss_dssp CHHHHHHHHHHH-HHTTCCEEEESSTTTTGGGSCHH-------HHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHH-HHcCCCEEEecccccChhhCCHH-------HHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHH
Confidence 344444444444 36899999998876533222211 1123333333332 3689886 55555555444333
Q ss_pred --HcCcCeeEEchHHhhCCc
Q 017176 227 --RKGAHHVMVGRAAYQNPW 244 (376)
Q Consensus 227 --~~Gad~VmiGRa~l~~P~ 244 (376)
+.|||++++-...+..|.
T Consensus 150 A~~~Gadavlvv~PyY~k~s 169 (360)
T 4dpp_A 150 GFAVGMHAALHINPYYGKTS 169 (360)
T ss_dssp HHHTTCSEEEEECCCSSCCC
T ss_pred HHHcCCCEEEEcCCCCCCCC
Confidence 379999999877665553
No 486
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=83.82 E-value=31 Score=33.04 Aligned_cols=133 Identities=16% Similarity=0.095 Sum_probs=83.5
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEecCCCCCCccHHH
Q 017176 74 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQ 153 (376)
Q Consensus 74 ~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKiR~g~~~~~~~~~ 153 (376)
++.+...+.|+.++++|+|.|-...=-|-+. .+.|-+ + ...-.+++..+++..++|+..-+ -+..+++
T Consensus 153 es~e~a~~~a~~~k~aGa~~vk~q~fkprts---~~~f~g-l---~~egl~~L~~~~~~~Gl~~~te~----~d~~~~~- 220 (385)
T 3nvt_A 153 ESYEQVAAVAESIKAKGLKLIRGGAFKPRTS---PYDFQG-L---GLEGLKILKRVSDEYGLGVISEI----VTPADIE- 220 (385)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECBSSCCCSS---TTSCCC-C---THHHHHHHHHHHHHHTCEEEEEC----CSGGGHH-
T ss_pred CCHHHHHHHHHHHHHcCCCeEEcccccCCCC---hHhhcC-C---CHHHHHHHHHHHHHcCCEEEEec----CCHHHHH-
Confidence 4678888899999999999998765444321 111211 1 12334566677777889987632 2222222
Q ss_pred HHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEEecCC-CCHHHHHHHHH----c
Q 017176 154 LCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGI-NTVDEVNAALR----K 228 (376)
Q Consensus 154 ~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGgI-~s~~da~~~l~----~ 228 (376)
+ +.+. +|++-|-+|+.. +++++.++.+ .+.||+..-|. .|.+++..+.+ .
T Consensus 221 ---~----l~~~-vd~lkIgs~~~~---------------n~~LL~~~a~--~gkPVilk~G~~~t~~e~~~Ave~i~~~ 275 (385)
T 3nvt_A 221 ---V----ALDY-VDVIQIGARNMQ---------------NFELLKAAGR--VDKPILLKRGLSATIEEFIGAAEYIMSQ 275 (385)
T ss_dssp ---H----HTTT-CSEEEECGGGTT---------------CHHHHHHHHT--SSSCEEEECCTTCCHHHHHHHHHHHHTT
T ss_pred ---H----HHhh-CCEEEECccccc---------------CHHHHHHHHc--cCCcEEEecCCCCCHHHHHHHHHHHHHc
Confidence 2 2356 999999887632 1556666554 38999998888 89988877665 5
Q ss_pred Cc-CeeEEchHHhhCC
Q 017176 229 GA-HHVMVGRAAYQNP 243 (376)
Q Consensus 229 Ga-d~VmiGRa~l~~P 243 (376)
|. +.+.+=||.-.-|
T Consensus 276 Gn~~i~L~~rG~s~yp 291 (385)
T 3nvt_A 276 GNGKIILCERGIRTYE 291 (385)
T ss_dssp TCCCEEEEECCBCCSC
T ss_pred CCCeEEEEECCCCCCC
Confidence 76 4555555554434
No 487
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=83.70 E-value=24 Score=34.32 Aligned_cols=157 Identities=11% Similarity=0.053 Sum_probs=90.1
Q ss_pred CCEEEEe---cCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcc---cCccEE
Q 017176 65 HPIVLQI---GGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN---TNVPVS 138 (376)
Q Consensus 65 ~p~~vQL---~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~---~~~pv~ 138 (376)
.|+++-+ || ++....+.++.+.++|+.+|.|-=....+| |.|..++.-+-..+...+-|++++.+ .+.++.
T Consensus 153 lPviaD~DtGyG-~~~~v~~tv~~~~~aGaaGi~IEDq~~~~K--kCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~d~~ 229 (435)
T 3lg3_A 153 LPIVADAEAGFG-GVLNAFELMKAMIEAGAAGVHFEDQLAAVK--KCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTL 229 (435)
T ss_dssp CCEEEECTTCSS-SHHHHHHHHHHHHHHTCSEEEEESBCGGGC--BCSTTCBCEECCHHHHHHHHHHHHHHHHHHTCCCE
T ss_pred CCeEEECCCCCC-CcHHHHHHHHHHHHcCCEEEEEecCCCCcc--ccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeE
Confidence 7888887 34 344678889999999999999975443233 23444444455666655555665543 255555
Q ss_pred EEecCCCCC----------------------------CccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCC
Q 017176 139 VKCRIGVDD----------------------------HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTI 190 (376)
Q Consensus 139 vKiR~g~~~----------------------------~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~ 190 (376)
|=-|..-.. ...+++.++... .+.+ |+|.|-+++....
T Consensus 230 IiARTDa~aa~l~~s~~d~rD~~fi~G~r~~eG~y~~~~gld~AI~Ra~-AY~~-GAD~if~E~~~~~------------ 295 (435)
T 3lg3_A 230 LIARTDADAADLLTSDCDPYDREFITGDRTAEGFFRTRAGIEQAISRGL-AYAP-YADLVWCETSTPD------------ 295 (435)
T ss_dssp EEEEECTTTCCEESCCCCGGGGGGEEEEECTTCCEEECCSHHHHHHHHH-HHGG-GCSEEEECCSSCC------------
T ss_pred EEEEcCCccccccccccccccchhhcccccccccccccCCHHHHHHHHH-HHHc-cCCEEEecCCCCC------------
Confidence 555553210 023666666543 4456 9999999875421
Q ss_pred CcccHHHHHH----HHhhCCCCeEEEecC-CCC------HHHHH----HHHHcCcCeeEEchHHhhC
Q 017176 191 PPLKYEYYYA----LLRDFPDLTFTLNGG-INT------VDEVN----AALRKGAHHVMVGRAAYQN 242 (376)
Q Consensus 191 ~~~~~~~v~~----~~~~~~~ipVi~nGg-I~s------~~da~----~~l~~Gad~VmiGRa~l~~ 242 (376)
.+.+.+ +...+|..++.+|.. .++ .+++. ++-+.|...|.++-+.+.-
T Consensus 296 ----~~ei~~f~~~v~~~~P~~~La~~~sPsfnw~~~~~d~~~~~f~~eLa~lG~~~v~~~la~~ra 358 (435)
T 3lg3_A 296 ----LALAKRFADAVHAQFPGKLLAYNCSPSFNWKKNLTDQQIASFQDELSAMGYKYQFITLAGIHS 358 (435)
T ss_dssp ----HHHHHHHHHHHHHHSTTCEEEEECCSSSCHHHHSCHHHHHHHHHHHHHTTEEEEEETTHHHHH
T ss_pred ----HHHHHHHHHHhccccCCeEEEeCCCCCccccccCCHHHHHHHHHHHHHcCCcEEEeCcHHHHH
Confidence 232323 323345444555543 344 33433 2333799999888766543
No 488
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=83.65 E-value=2.4 Score=39.63 Aligned_cols=83 Identities=11% Similarity=-0.034 Sum_probs=48.5
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEEE-ecCCCCHHHHHHHH-
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTL-NGGINTVDEVNAAL- 226 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~-nGgI~s~~da~~~l- 226 (376)
+++.+.+.+..++ +.|++.|.+-|.|......+.. -+.+.+...++.. .++|||+ .|+..+.+.++.+.
T Consensus 27 D~~~l~~lv~~li-~~Gv~gl~v~GtTGE~~~Ls~~-------Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~ 98 (309)
T 3fkr_A 27 DLASQKRAVDFMI-DAGSDGLCILANFSEQFAITDD-------ERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLR 98 (309)
T ss_dssp CHHHHHHHHHHHH-HTTCSCEEESSGGGTGGGSCHH-------HHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECccccCcccCCHH-------HHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHH
Confidence 3444444444443 6899999998876543222211 1123343333332 3699985 56666665554333
Q ss_pred --HcCcCeeEEchHHh
Q 017176 227 --RKGAHHVMVGRAAY 240 (376)
Q Consensus 227 --~~Gad~VmiGRa~l 240 (376)
+.|||+|++-...+
T Consensus 99 A~~~Gadavlv~~Pyy 114 (309)
T 3fkr_A 99 AQQLGAAMVMAMPPYH 114 (309)
T ss_dssp HHHTTCSEEEECCSCB
T ss_pred HHHcCCCEEEEcCCCC
Confidence 37999999988765
No 489
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=83.37 E-value=5.9 Score=35.14 Aligned_cols=149 Identities=8% Similarity=0.085 Sum_probs=74.8
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccE-EEEecCC
Q 017176 66 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPV-SVKCRIG 144 (376)
Q Consensus 66 p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv-~vKiR~g 144 (376)
+++++........+.++.+.+.++|||+||+....|..... + + .+.+.+.+.++. .++.+ ++-....
T Consensus 8 ~lg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~--~--~----~~~~~~~~~~~~----~gl~~~~~~~~~~ 75 (272)
T 2q02_A 8 RFCINRKIAPGLSIEAFFRLVKRLEFNKVELRNDMPSGSVT--D--D----LNYNQVRNLAEK----YGLEIVTINAVYP 75 (272)
T ss_dssp GEEEEGGGCTTSCHHHHHHHHHHTTCCEEEEETTSTTSSTT--T--T----CCHHHHHHHHHH----TTCEEEEEEEETT
T ss_pred hhhhcccccCCCCHHHHHHHHHHcCCCEEEeeccccccccc--c--c----cCHHHHHHHHHH----cCCeEEechhhhc
Confidence 35666554322346777888889999999998655531110 1 1 344555554443 34554 3332222
Q ss_pred CCCC--ccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEE-e-----cCC
Q 017176 145 VDDH--DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL-N-----GGI 216 (376)
Q Consensus 145 ~~~~--~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~-n-----GgI 216 (376)
+... ...+.+.+ ...++.+.|++.|.+|++... . ..+.....-.+..+.+..++. ++.+.. | .-+
T Consensus 76 ~~~~~~~~~~~~~~-~i~~a~~lG~~~v~~~~g~~~---~--~~~~~~~~~~l~~l~~~a~~~-gv~l~~E~~~~~~~~~ 148 (272)
T 2q02_A 76 FNQLTEEVVKKTEG-LLRDAQGVGARALVLCPLNDG---T--IVPPEVTVEAIKRLSDLFARY-DIQGLVEPLGFRVSSL 148 (272)
T ss_dssp TTSCCHHHHHHHHH-HHHHHHHHTCSEEEECCCCSS---B--CCCHHHHHHHHHHHHHHHHTT-TCEEEECCCCSTTCSC
T ss_pred cCCcHHHHHHHHHH-HHHHHHHhCCCEEEEccCCCc---h--hHHHHHHHHHHHHHHHHHHHc-CCEEEEEecCCCcccc
Confidence 2221 11222222 233456789999999876421 0 111000000122223334443 555543 1 246
Q ss_pred CCHHHHHHHHH-cCcCeeE
Q 017176 217 NTVDEVNAALR-KGAHHVM 234 (376)
Q Consensus 217 ~s~~da~~~l~-~Gad~Vm 234 (376)
.+.+++.++++ .+ +.|.
T Consensus 149 ~~~~~~~~l~~~v~-~~~g 166 (272)
T 2q02_A 149 RSAVWAQQLIREAG-SPFK 166 (272)
T ss_dssp CCHHHHHHHHHHHT-CCCE
T ss_pred cCHHHHHHHHHHhC-cCeE
Confidence 78999988887 55 5433
No 490
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=83.33 E-value=1.8 Score=40.62 Aligned_cols=85 Identities=8% Similarity=-0.022 Sum_probs=48.2
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEEEecCCCCHHHHHHHH--
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAAL-- 226 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~nGgI~s~~da~~~l-- 226 (376)
+++.+.+.+..++ +.|++.|.+-|-|......+.. -+.+.+...++.. .++|||+.-|- +.+++.+..
T Consensus 31 D~~~l~~lv~~li-~~Gv~Gl~v~GtTGE~~~Ls~e-------Er~~v~~~~v~~~~grvpViaGvg~-~t~~ai~la~~ 101 (316)
T 3e96_A 31 DWHHYKETVDRIV-DNGIDVIVPCGNTSEFYALSLE-------EAKEEVRRTVEYVHGRALVVAGIGY-ATSTAIELGNA 101 (316)
T ss_dssp CHHHHHHHHHHHH-TTTCCEECTTSGGGTGGGSCHH-------HHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEeCccccCcccCCHH-------HHHHHHHHHHHHhCCCCcEEEEeCc-CHHHHHHHHHH
Confidence 4444444444444 6999999998876533222211 1123344444332 36898855343 555544433
Q ss_pred --HcCcCeeEEchHHhhCC
Q 017176 227 --RKGAHHVMVGRAAYQNP 243 (376)
Q Consensus 227 --~~Gad~VmiGRa~l~~P 243 (376)
+.|||+||+-...+..|
T Consensus 102 A~~~Gadavlv~~P~y~~~ 120 (316)
T 3e96_A 102 AKAAGADAVMIHMPIHPYV 120 (316)
T ss_dssp HHHHTCSEEEECCCCCSCC
T ss_pred HHhcCCCEEEEcCCCCCCC
Confidence 27999999987766544
No 491
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=82.99 E-value=13 Score=36.51 Aligned_cols=73 Identities=11% Similarity=0.097 Sum_probs=45.8
Q ss_pred HhhcCCcc-------EEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCCCCe-EEE---ecCCCCHHHHHHHHHcC
Q 017176 161 VSSLSPTR-------HFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLT-FTL---NGGINTVDEVNAALRKG 229 (376)
Q Consensus 161 ~~e~~Gvd-------~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~ip-Vi~---nGgI~s~~da~~~l~~G 229 (376)
.+.+.|+| .+.|..++.. |. ..++..+.+.+.++.+...++| ++. ++|=.+.+++.++.+.|
T Consensus 210 ~f~~~gld~~w~~v~~lvVqpGt~f--~~-----~~v~~y~~e~~~~L~~~v~~~P~LVlhghStDy~~~e~l~~~V~~G 282 (450)
T 3txv_A 210 AFEEAGAAGAFSRVVGAVVQPGVEF--GN-----ENVIAYDRARAEKLSATLGQLHGMVFEAHSTDYQTPDALRELVADG 282 (450)
T ss_dssp HHHHHTCHHHHTTEEEEECCCSCEE--CS-----SCEECCCTTTTSHHHHGGGTSTTCEEEESCCTTCCHHHHHHHHHTT
T ss_pred HHHHhCcccccCceeEEEecCCccc--CC-----CCCCCCCHHHHHHHHHHhccCCCEEEecCCCCCCCHHHHHHHHHcC
Confidence 34557886 7777777754 11 1122223333445554433677 665 44456778888999999
Q ss_pred cCeeEEchHHh
Q 017176 230 AHHVMVGRAAY 240 (376)
Q Consensus 230 ad~VmiGRa~l 240 (376)
..-+=||.++.
T Consensus 283 iaklNVgp~Lt 293 (450)
T 3txv_A 283 FAILKVGPGLT 293 (450)
T ss_dssp EEEEEECHHHH
T ss_pred CcEEEEChHHH
Confidence 99999998875
No 492
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=82.99 E-value=28 Score=31.90 Aligned_cols=153 Identities=16% Similarity=0.153 Sum_probs=94.5
Q ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 62 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 62 ~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
....|+++.+.+++.++-.+.++.++++|+|++-+- .|.-. + -..+-+.+-.++|.+++++|+.+--
T Consensus 74 ~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~--~P~y~--~---------~~~~~l~~~f~~va~a~~lPiilYn 140 (297)
T 3flu_A 74 AKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSV--VPYYN--K---------PSQEGIYQHFKTIAEATSIPMIIYN 140 (297)
T ss_dssp TTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE--CCCSS--C---------CCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEC--CCCCC--C---------CCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 456799999999999999999999999999999884 45421 1 1345677788888888899998864
Q ss_pred ---cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCC-CCeEEEecCCC
Q 017176 142 ---RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGIN 217 (376)
Q Consensus 142 ---R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi~nGgI~ 217 (376)
|.|.+- +.+ + +.++.+--.+-.|--..+ ++..+.++++... +.. +.+|+=
T Consensus 141 ~P~~tg~~l--~~~-~---~~~La~~pnivgiKdssg------------------d~~~~~~~~~~~~~~f~-v~~G~d- 194 (297)
T 3flu_A 141 VPGRTVVSM--TND-T---ILRLAEIPNIVGVKEASG------------------NIGSNIELINRAPEGFV-VLSGDD- 194 (297)
T ss_dssp CHHHHSSCC--CHH-H---HHHHTTSTTEEEEEECSC------------------CHHHHHHHHHHSCTTCE-EEECCG-
T ss_pred CCchhccCC--CHH-H---HHHHHcCCCEEEEEeCCC------------------CHHHHHHHHHhcCCCeE-EEECcH-
Confidence 233332 222 2 233432222333332211 1455556555442 444 455641
Q ss_pred CHHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhC
Q 017176 218 TVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYG 256 (376)
Q Consensus 218 s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g 256 (376)
+.+...+..|++|+..+.+-+ -|..+.+.++....|
T Consensus 195 --~~~l~~l~~G~~G~is~~an~-~P~~~~~l~~a~~~G 230 (297)
T 3flu_A 195 --HTALPFMLCGGHGVITVAANA-APKLFADMCRAALQG 230 (297)
T ss_dssp --GGHHHHHHTTCCEEEESGGGT-CHHHHHHHHHHHHHT
T ss_pred --HHHHHHHhCCCCEEEechHhh-hHHHHHHHHHHHHCC
Confidence 234566778999999888765 477655544444445
No 493
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=82.72 E-value=11 Score=35.21 Aligned_cols=100 Identities=12% Similarity=0.012 Sum_probs=58.7
Q ss_pred CCCEEEEecC-CCHHHHHHHHHHHHHCCCCEEEecCCCCCccccC----CCCccccc-cCCHHHHHHHHHHHhccc--Cc
Q 017176 64 QHPIVLQIGG-SNLDNLAKATELANAYNYDEINLNCGCPSPKVAG----HGCFGVSL-MLDPKFVGEAMSVIAANT--NV 135 (376)
Q Consensus 64 ~~p~~vQL~g-~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r----~g~yG~~l-~~~~~~~~eiv~~v~~~~--~~ 135 (376)
+.|+++-+.. .+.++..+.|+.++++|+|+|.++.+.......+ ...+|+.- ........+.++.+++.+ ++
T Consensus 211 ~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~i 290 (336)
T 1f76_A 211 YVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRL 290 (336)
T ss_dssp CCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSS
T ss_pred cCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCC
Confidence 6799999874 3567888899999999999999975422110000 01112110 001234457777777777 67
Q ss_pred cEEEEecCCCCCCccHHHHHHHHHHHhhcCCccEEEEc
Q 017176 136 PVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIH 173 (376)
Q Consensus 136 pv~vKiR~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh 173 (376)
||.. .-|+.+ .++..+ .+ ++|+|.|.+-
T Consensus 291 pVi~--~GGI~~---~~da~~----~l-~~GAd~V~ig 318 (336)
T 1f76_A 291 PIIG--VGGIDS---VIAARE----KI-AAGASLVQIY 318 (336)
T ss_dssp CEEE--ESSCCS---HHHHHH----HH-HHTCSEEEES
T ss_pred CEEE--ECCCCC---HHHHHH----HH-HCCCCEEEee
Confidence 7765 334443 334333 23 2689998764
No 494
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=82.64 E-value=12 Score=36.45 Aligned_cols=101 Identities=10% Similarity=0.181 Sum_probs=60.3
Q ss_pred CHHHHHHHHHHHhcc---cC--ccEEEEecC------C-C---CCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCC
Q 017176 118 DPKFVGEAMSVIAAN---TN--VPVSVKCRI------G-V---DDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGI 182 (376)
Q Consensus 118 ~~~~~~eiv~~v~~~---~~--~pv~vKiR~------g-~---~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~ 182 (376)
+.+.+.-++++|+++ ++ +.+.+-.-. | + ...-+.+++++++..++++.++.+|. .
T Consensus 217 ~~e~l~~i~~Air~agy~~G~dv~l~vD~aase~~~~g~Y~l~~~~~t~~eai~~~~~ll~~y~i~~IE--------d-- 286 (428)
T 3tqp_A 217 NEAAFELILEAIEDANYVPGKDIYLALDAASSELYQNGRYDFENNQLTSEEMIDRLTEWTKKYPVISIE--------D-- 286 (428)
T ss_dssp HHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGSEETTEECCSSSCBCHHHHHHHHHHHHHHSCEEEEE--------C--
T ss_pred HHHHHHHHHHHHHHhhcccCCceEEEEecchhhhccCCceeccccccCHHHHHHHHHHHHhhcccceEe--------C--
Confidence 444555668999987 53 444443310 0 0 01124567777766667788877665 1
Q ss_pred CCCCCCCCCcccHHHHHHHHhhCCCCeEEEecC---CCCHHHHHHHHH-cCcCeeEE
Q 017176 183 SPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG---INTVDEVNAALR-KGAHHVMV 235 (376)
Q Consensus 183 ~~~~~~~~~~~~~~~v~~~~~~~~~ipVi~nGg---I~s~~da~~~l~-~Gad~Vmi 235 (376)
.+++-+|+..+++.+.. +.||-..|| +.++.++.++++ ..||.|++
T Consensus 287 ------Pl~~dD~eg~~~L~~~~-~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~i 336 (428)
T 3tqp_A 287 ------GLSENDWAGWKLLTERL-ENKVQLVGDDIFVTNPDILEKGIKKNIANAILV 336 (428)
T ss_dssp ------CSCTTCHHHHHHHHHHH-TTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred ------CCCcccHHHHHHHHHhc-CCCcceeccccccCCHHHHHHHHHhCCCCEEEe
Confidence 12233477777776654 444433455 459999999998 55888876
No 495
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=82.54 E-value=30 Score=31.84 Aligned_cols=153 Identities=15% Similarity=0.105 Sum_probs=94.4
Q ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEEe
Q 017176 62 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 141 (376)
Q Consensus 62 ~~~~p~~vQL~g~~~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 141 (376)
....|+++.+.+++.++-.+.++.++++|+|++-+- .|... + -..+-+.+-.++|.+++++|+.+--
T Consensus 79 ~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~--~P~y~--~---------~s~~~l~~~f~~va~a~~lPiilYn 145 (301)
T 1xky_A 79 DKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLV--APYYN--K---------PSQEGMYQHFKAIAESTPLPVMLYN 145 (301)
T ss_dssp TTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEE--CCCSS--C---------CCHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred CCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEc--CCCCC--C---------CCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 456799999999999999999999999999999875 35421 1 1346778888888888899998754
Q ss_pred ---cCCCCCCccHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCC-CCeEEEecCCC
Q 017176 142 ---RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGIN 217 (376)
Q Consensus 142 ---R~g~~~~~~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi~nGgI~ 217 (376)
|.|.+- +.+ + +.++++.-.+-.|--..+ +...+.++++..+ ++. +.+|+=
T Consensus 146 ~P~~tg~~l--~~~-~---~~~La~~pnIvgiKdssg------------------d~~~~~~~~~~~~~~f~-v~~G~d- 199 (301)
T 1xky_A 146 VPGRSIVQI--SVD-T---VVRLSEIENIVAIKDAGG------------------DVLTMTEIIEKTADDFA-VYSGDD- 199 (301)
T ss_dssp CHHHHSSCC--CHH-H---HHHHHTSTTEEEEEECSS------------------CHHHHHHHHHHSCTTCE-EEESSG-
T ss_pred CccccCCCC--CHH-H---HHHHHcCCCEEEEEcCCC------------------CHHHHHHHHHhcCCCeE-EEECcH-
Confidence 334332 222 2 223333223333332221 1444555555443 343 456642
Q ss_pred CHHHHHHHHHcCcCeeEEchHHhhCCchhhHhhhhhhhC
Q 017176 218 TVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYG 256 (376)
Q Consensus 218 s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g 256 (376)
+.+...+..|++|++.+.+-+ -|..+.+.++....|
T Consensus 200 --~~~l~~l~~G~~G~is~~an~-~P~~~~~l~~a~~~G 235 (301)
T 1xky_A 200 --GLTLPAMAVGAKGIVSVASHV-IGNEMQEMIAAFQAG 235 (301)
T ss_dssp --GGHHHHHHTTCCEEEESTHHH-HHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHcCCCEEEcCHHHh-CHHHHHHHHHHHHCC
Confidence 235556678999999988765 466554444443445
No 496
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=82.52 E-value=6.6 Score=36.04 Aligned_cols=104 Identities=9% Similarity=0.033 Sum_probs=58.0
Q ss_pred HHHHHHHhc-ccCccEEEEecCCCCCCccHHHHHHHHHHHhhc-CCccEEEEccCcccc-CCCCCCCCCCCCcccHHHHH
Q 017176 123 GEAMSVIAA-NTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSL-SPTRHFIIHSRKALL-NGISPAENRTIPPLKYEYYY 199 (376)
Q Consensus 123 ~eiv~~v~~-~~~~pv~vKiR~g~~~~~~~~~~~~~i~~~~e~-~Gvd~I~vh~r~~~~-~g~~~~~~~~~~~~~~~~v~ 199 (376)
.++++.+++ ..+.|+.+-+..+ +.++..+. ++.+++ +|+|+|.+|-..... .|. ...-..+....+.+.
T Consensus 86 ~~~~~~~~~~~~~~p~~v~l~~~-----~~~~~~~~-a~~~~~~~g~d~iei~~~~p~~~~g~--~~~g~~~~~~~eii~ 157 (311)
T 1ep3_A 86 TEKLPWLNENFPELPIIANVAGS-----EEADYVAV-CAKIGDAANVKAIELNISCPNVKHGG--QAFGTDPEVAAALVK 157 (311)
T ss_dssp HTHHHHHHHHCTTSCEEEEECCS-----SHHHHHHH-HHHHTTSTTEEEEEEECCSEEGGGTT--EEGGGCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEEcCC-----CHHHHHHH-HHHHhccCCCCEEEEeCCCCCCCCch--hhhcCCHHHHHHHHH
Confidence 345666665 3377888766542 23333333 345556 899999998543211 110 000000111245566
Q ss_pred HHHhhCCCCeEEE--ecCCCCHHH-HHHHHHcCcCeeEE
Q 017176 200 ALLRDFPDLTFTL--NGGINTVDE-VNAALRKGAHHVMV 235 (376)
Q Consensus 200 ~~~~~~~~ipVi~--nGgI~s~~d-a~~~l~~Gad~Vmi 235 (376)
++++.. ++||+. ..++.+..+ +..+.+.|+|+|.+
T Consensus 158 ~v~~~~-~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v 195 (311)
T 1ep3_A 158 ACKAVS-KVPLYVKLSPNVTDIVPIAKAVEAAGADGLTM 195 (311)
T ss_dssp HHHHHC-SSCEEEEECSCSSCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHhc-CCCEEEEECCChHHHHHHHHHHHHcCCCEEEE
Confidence 666554 788875 346667666 44455599999998
No 497
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=82.42 E-value=3.2 Score=38.87 Aligned_cols=84 Identities=15% Similarity=0.103 Sum_probs=47.8
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhC-CCCeEEE-ecCCCCHHHHHHHH-
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTL-NGGINTVDEVNAAL- 226 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~ipVi~-nGgI~s~~da~~~l- 226 (376)
+++.+.+.+..+ .+.|++.|.+-|.|......+.. -+.+.+...++.. .++|||+ .|+..+.+.++.+.
T Consensus 30 D~~~l~~lv~~l-i~~Gv~gl~v~GtTGE~~~Ls~~-------Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~ 101 (318)
T 3qfe_A 30 DLASQERYYAYL-ARSGLTGLVILGTNAEAFLLTRE-------ERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHIND 101 (318)
T ss_dssp CHHHHHHHHHHH-HTTTCSEEEESSGGGTGGGSCHH-------HHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHH-HHcCCCEEEeCccccChhhCCHH-------HHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHH
Confidence 344444444444 36899999999877543222211 1123333333332 3689874 55555555544333
Q ss_pred --HcCcCeeEEchHHhh
Q 017176 227 --RKGAHHVMVGRAAYQ 241 (376)
Q Consensus 227 --~~Gad~VmiGRa~l~ 241 (376)
+.|||+|++-...+.
T Consensus 102 a~~~Gadavlv~~P~y~ 118 (318)
T 3qfe_A 102 ASVAGANYVLVLPPAYF 118 (318)
T ss_dssp HHHHTCSEEEECCCCC-
T ss_pred HHHcCCCEEEEeCCccc
Confidence 379999999888554
No 498
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=82.37 E-value=1.3 Score=41.22 Aligned_cols=60 Identities=15% Similarity=0.190 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHCCCCEEEecCCCCCccccCCCCccccccCCHHHHHHHHHHHhcccCccEEEE
Q 017176 76 LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVK 140 (376)
Q Consensus 76 ~~~~~~aa~~~~~~G~d~IeiN~gcP~~~v~r~g~yG~~l~~~~~~~~eiv~~v~~~~~~pv~vK 140 (376)
++...+.|+...+.|+|.|||++-+- |.|.-.-+.....+.+..+++++++.+++|++|-
T Consensus 62 ~~~a~~~a~~~v~~GAdiIDIGgeSt-----rPga~~v~~~eE~~RvvpvI~~l~~~~~vpiSID 121 (297)
T 1tx2_A 62 VDAAVRHAKEMRDEGAHIIDIGGEST-----RPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISID 121 (297)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESCC---------CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcC-----CCCCCCCCHHHHHHHHHHHHHHHHhcCCceEEEe
Confidence 45666666777789999999997442 1111111223344556677788887778999884
No 499
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=82.36 E-value=8.3 Score=37.56 Aligned_cols=70 Identities=14% Similarity=0.157 Sum_probs=47.9
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCccccCCCCCCCCCCCCcccHHHHHHHHhhCC-CCeEEEecCCCC-HHHHHHHHH
Q 017176 150 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINT-VDEVNAALR 227 (376)
Q Consensus 150 ~~~~~~~~i~~~~e~~Gvd~I~vh~r~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~-~ipVi~nGgI~s-~~da~~~l~ 227 (376)
+.+++++++..++++.++.+|. . .+++-+|+..+++.+... ++||++.=-+.| +.++.++++
T Consensus 262 t~~eai~~~~~ll~~y~i~~IE--------d--------Pl~~dD~e~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~ 325 (417)
T 3qn3_A 262 SSEALIERYVELCAKYPICSIE--------D--------GLAENDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGII 325 (417)
T ss_dssp CHHHHHHHHHHHHHHSCEEEEE--------S--------SSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhcceeEEe--------c--------CCCcccHHHHHHHHHhhCCCCceecCCcccCCHHHHHHHHH
Confidence 3567777777767888877665 1 112234777777776643 588776555666 999999998
Q ss_pred -cCcCeeEE
Q 017176 228 -KGAHHVMV 235 (376)
Q Consensus 228 -~Gad~Vmi 235 (376)
..||.|++
T Consensus 326 ~~a~d~i~i 334 (417)
T 3qn3_A 326 KKMANAVLI 334 (417)
T ss_dssp HTCCSEEEE
T ss_pred hCCCCEEEe
Confidence 56888876
No 500
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=82.31 E-value=6.8 Score=35.98 Aligned_cols=37 Identities=8% Similarity=0.077 Sum_probs=30.6
Q ss_pred CCCCEEEEecCCCHH---HHHHHHHHHHHCCCCEEEecCC
Q 017176 63 EQHPIVLQIGGSNLD---NLAKATELANAYNYDEINLNCG 99 (376)
Q Consensus 63 ~~~p~~vQL~g~~~~---~~~~aa~~~~~~G~d~IeiN~g 99 (376)
...++++|++.-... .+.++.+.+.++||++||+...
T Consensus 19 ~~~~~g~~~~s~~~~~~~~l~~~l~~aa~~G~~~VEl~~~ 58 (305)
T 3obe_A 19 AGKKMGLQTYSLGQELLQDMPNGLNRLAKAGYTDLEIFGY 58 (305)
T ss_dssp CCCCCEEEGGGGTHHHHTTHHHHHHHHHHHTCCEEEECCB
T ss_pred cCCceEEEEEEchhhhhcCHHHHHHHHHHcCCCEEEeccc
Confidence 456899999876554 7888999999999999999753
Done!