Query 017178
Match_columns 376
No_of_seqs 245 out of 829
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 06:17:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017178.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017178hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2458 Endoplasmic reticulum 100.0 1E-122 3E-127 912.1 25.5 372 1-376 156-528 (528)
2 PF05686 Glyco_transf_90: Glyc 100.0 1E-112 3E-117 857.8 30.0 368 1-368 28-395 (395)
3 smart00672 CAP10 Putative lipo 100.0 2.7E-71 6E-76 528.0 21.2 249 50-298 1-256 (256)
4 PF13524 Glyco_trans_1_2: Glyc 98.0 2.2E-05 4.7E-10 62.7 7.7 82 197-284 9-90 (92)
5 PRK10307 putative glycosyl tra 81.7 6.4 0.00014 39.4 8.4 83 200-289 321-406 (412)
6 COG4641 Uncharacterized protei 81.4 5.7 0.00012 40.2 7.6 85 186-276 256-347 (373)
7 cd03801 GT1_YqgM_like This fam 80.6 6.6 0.00014 36.5 7.6 84 197-284 286-369 (374)
8 PRK15427 colanic acid biosynth 80.5 7.9 0.00017 39.3 8.6 87 199-289 317-404 (406)
9 cd04962 GT1_like_5 This family 77.6 13 0.00028 36.0 8.8 85 200-288 284-368 (371)
10 TIGR03087 stp1 sugar transfera 76.7 11 0.00023 37.8 8.1 85 196-288 308-394 (397)
11 cd03807 GT1_WbnK_like This fam 74.5 16 0.00035 34.2 8.4 78 198-282 280-358 (365)
12 cd05844 GT1_like_7 Glycosyltra 74.5 11 0.00023 36.5 7.3 82 199-284 283-364 (367)
13 cd03808 GT1_cap1E_like This fa 72.7 18 0.00039 33.7 8.1 81 198-282 275-355 (359)
14 TIGR03088 stp2 sugar transfera 72.7 21 0.00045 34.9 8.9 85 199-287 285-369 (374)
15 cd03822 GT1_ecORF704_like This 72.6 16 0.00034 34.7 7.9 78 198-281 281-358 (366)
16 PRK15484 lipopolysaccharide 1, 71.4 16 0.00034 36.6 7.8 83 202-291 293-378 (380)
17 cd03794 GT1_wbuB_like This fam 71.2 13 0.00027 35.2 6.8 79 199-281 312-390 (394)
18 TIGR02472 sucr_P_syn_N sucrose 71.1 11 0.00025 38.4 6.9 81 201-288 355-438 (439)
19 PF00534 Glycos_transf_1: Glyc 70.3 10 0.00022 32.6 5.5 69 198-270 104-172 (172)
20 TIGR02149 glgA_Coryne glycogen 70.2 20 0.00043 35.1 8.1 77 203-282 297-378 (388)
21 cd03818 GT1_ExpC_like This fam 70.2 22 0.00047 35.4 8.6 75 201-279 315-389 (396)
22 cd03795 GT1_like_4 This family 67.6 13 0.00029 35.3 6.2 79 198-280 277-356 (357)
23 cd03825 GT1_wcfI_like This fam 66.4 29 0.00062 33.2 8.2 79 199-282 277-356 (365)
24 cd04955 GT1_like_6 This family 66.4 22 0.00048 34.0 7.5 79 199-285 281-359 (363)
25 cd03792 GT1_Trehalose_phosphor 64.9 28 0.0006 34.3 8.0 81 202-288 289-369 (372)
26 cd03817 GT1_UGDG_like This fam 64.8 30 0.00065 32.5 8.0 73 198-275 290-362 (374)
27 PF03016 Exostosin: Exostosin 64.3 28 0.00061 33.1 7.7 126 90-235 152-284 (302)
28 PRK05749 3-deoxy-D-manno-octul 63.6 9.8 0.00021 38.4 4.6 68 203-274 337-406 (425)
29 cd03799 GT1_amsK_like This is 61.6 23 0.0005 33.6 6.6 79 198-280 273-351 (355)
30 cd03805 GT1_ALG2_like This fam 54.8 29 0.00062 34.0 6.1 74 203-281 316-389 (392)
31 cd03821 GT1_Bme6_like This fam 54.7 63 0.0014 30.2 8.2 77 198-281 293-370 (375)
32 TIGR03449 mycothiol_MshA UDP-N 49.0 89 0.0019 30.9 8.6 79 199-282 315-393 (405)
33 cd03823 GT1_ExpE7_like This fa 48.1 65 0.0014 30.2 7.2 73 197-273 274-346 (359)
34 cd03798 GT1_wlbH_like This fam 47.6 65 0.0014 30.0 7.0 85 198-288 290-374 (377)
35 cd03814 GT1_like_2 This family 46.3 82 0.0018 29.6 7.6 78 198-280 278-355 (364)
36 cd04946 GT1_AmsK_like This fam 46.0 69 0.0015 32.3 7.4 78 199-281 323-402 (407)
37 cd03813 GT1_like_3 This family 45.1 75 0.0016 32.8 7.6 80 199-280 383-466 (475)
38 cd03809 GT1_mtfB_like This fam 43.4 49 0.0011 31.3 5.5 75 199-280 285-359 (365)
39 cd03800 GT1_Sucrose_synthase T 40.1 1E+02 0.0022 29.8 7.4 77 202-282 318-394 (398)
40 cd03816 GT1_ALG1_like This fam 38.1 52 0.0011 33.3 5.0 75 196-276 327-404 (415)
41 PLN02871 UDP-sulfoquinovose:DA 36.2 1.7E+02 0.0036 30.1 8.4 72 202-278 347-421 (465)
42 cd03819 GT1_WavL_like This fam 35.7 89 0.0019 29.7 6.0 76 198-278 276-353 (355)
43 cd03796 GT1_PIG-A_like This fa 35.5 1.4E+02 0.003 29.7 7.6 87 200-295 283-369 (398)
44 cd03820 GT1_amsD_like This fam 34.7 1.3E+02 0.0029 27.6 6.9 79 198-281 264-343 (348)
45 cd04951 GT1_WbdM_like This fam 33.4 1.8E+02 0.004 27.4 7.8 84 198-288 274-358 (360)
46 PF07788 DUF1626: Protein of u 31.9 1.8E+02 0.004 22.4 5.9 50 11-60 5-54 (70)
47 TIGR02470 sucr_synth sucrose s 29.3 1.8E+02 0.0038 32.8 7.6 81 204-288 661-745 (784)
48 KOG2619 Fucosyltransferase [Ca 22.5 5.5E+02 0.012 26.2 9.1 124 125-258 190-321 (372)
49 cd04949 GT1_gtfA_like This fam 22.2 2.6E+02 0.0056 27.1 6.7 79 198-280 290-368 (372)
50 PF14782 BBS2_C: Ciliary BBSom 20.0 1.1E+02 0.0024 31.8 3.6 57 310-371 28-84 (431)
No 1
>KOG2458 consensus Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif [General function prediction only]
Probab=100.00 E-value=1.3e-122 Score=912.05 Aligned_cols=372 Identities=67% Similarity=1.267 Sum_probs=365.5
Q ss_pred ChhhhcccCeEEEEEECCEEEEEeccccccchhhhHHHHHHHHHHhCCCCCCCeEEEEeCCCcccccccCCCCCCCCCCC
Q 017178 1 MIERARKTAHFRLVIVNGKAYVEKYKQSIQTRDKFTLWGILQLLRLYPGRLPDLELMFDCNDRPVVRARDFGGPNSGPPP 80 (376)
Q Consensus 1 ~~~~a~~~~~~r~~I~~GrlYv~~~~~~~~~R~~~~~~~ilqll~~~p~~lPDvef~~~~~D~P~~~~~~~~G~~~~~~P 80 (376)
|+|+|++.++||++|++|++||++|++++|+|++||+|||+|||++|||+|||+||||||+|+|++++.+++| ..+|+|
T Consensus 156 ~~erak~~a~fr~vI~~g~~yv~~Y~ks~qtrd~ft~wgilqLlr~ypgklPDlElmf~~~D~P~v~~~~~~~-~~~ppP 234 (528)
T KOG2458|consen 156 MAERAKRKAHFRLVIKEGRLYVENYRKSIQTRDVFTIWGILQLLRTYPGKLPDLELMFNCGDWPLVRKKDFQG-TPPPPP 234 (528)
T ss_pred HhhhhhcccceeeeeecCceehhhhhhhhcccchHHHHHHHHHHHhcCCCCCCceeeeecCCccccchhhccC-CCCCCC
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999888 458999
Q ss_pred eeeeccCCCCCceeccCCCCccccccCcCchHHHHHHHHhccCCCCcccccCceEEeeCCCCc-hhHHHHHHhhhcCCCC
Q 017178 81 LFRYCSDGSSLDIVFPDWSFWGWAETNIRPWSNVLKDIEEGNKRTKWKERVPYAYWRGNPNVS-PIRKELMTCNASDKND 159 (376)
Q Consensus 81 lfs~ck~~~~~DIl~Pd~~fw~wpe~~i~~w~~~~~~i~~~~~~~pW~~K~p~afWRG~~~~~-~~R~~L~~~~~~~~~~ 159 (376)
||+||++.++.||+||||+||||+|.||++|+.++..|.+||.+.+|.+|.|+||||||+++. +.|..|++|+++.-.+
T Consensus 235 lF~yCg~~~s~DIVfPdwsfwgw~e~nik~w~~~~~~~~egn~~~~W~~r~~yAywrGnp~v~e~~rl~ll~cn~s~~~d 314 (528)
T KOG2458|consen 235 LFSYCGSSESLDIVFPDWSFWGWAEVNIKPWEKLLEDIVEGNKRPKWKNKNPYAYWRGNPSVAERLRLDLLSCNNSELVD 314 (528)
T ss_pred eEeecCCcccccccccCccccCChhhcccccchHHHHHHhhccCCCcccCCceeEecCCCCccccchhhhhhcCCchhhc
Confidence 999999999999999999999999999999999999999999999999999999999999987 8999999999877779
Q ss_pred cccceeecccccccccCCccCCccccccccEEEeecCcccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccC
Q 017178 160 WNARLYVQDWGQESKQNFKQSNLGDQCSHRYKIYIEGWAWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRD 239 (376)
Q Consensus 160 ~~a~v~~~~w~~~~~~g~~~~~l~~~~~yKYli~ieG~~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~ 239 (376)
|+++++.|+|.+|++.||+++++.+||+|||+|||||.+||+|+||||+|+||+|++++.|+|||+++|+||+|||||++
T Consensus 315 ~~~~~y~qdw~~E~~~G~k~s~l~dqc~hrYkIyiEG~awsvs~kYilacDS~tL~v~p~YydfF~r~l~P~~HYwPIk~ 394 (528)
T KOG2458|consen 315 ANATLYFQDWSKESKLGFKQSNLFDQCKHRYKIYIEGTAWSVSEKYILACDSMTLKVKPEYYDFFYRGLQPWKHYWPIKS 394 (528)
T ss_pred hhhhhHHHhhhhhhhccccccchhhhcceeeEEEEeeeeeeeecceeeecceeEEeecchHHHHHhhcccchhccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHHHhcCCCCCCCCcccccccccccccCC
Q 017178 240 NSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKMGYVYDYMFHLLNEYARLLRFKPSIPAGALELCSETMACSAKG 319 (376)
Q Consensus 240 d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~~~~~~Y~~~LL~eYa~l~~~~P~~~~~a~e~~~e~~~c~~~~ 319 (376)
+ |+||++||+|+|+|+++||.||++|++|+++.|.|++|||||+|||+|||+||+|+|++|++|+|||+|+|+|+++|
T Consensus 395 ~--c~slkfaV~Wgn~h~~~Aq~Igk~gs~f~r~~L~m~~vYdYmfhllqeYakL~k~kpevp~~a~evc~~~m~cp~~g 472 (528)
T KOG2458|consen 395 N--CRSLKFAVDWGNNHDEEAQKIGKEGSEFARKNLKMDYVYDYMFHLLQEYAKLQKFKPEVPEGATEVCPETMACPEDG 472 (528)
T ss_pred c--hhHHHHHHHhcccChHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHhhcCCcCCCCccccCchhccCCccc
Confidence 8 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhhhcccCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 017178 320 TWRKFMEESMVKSPSDSIPCSLPPPYHPPALKNFTDTKVKLTRQVEAWENEYWKKIN 376 (376)
Q Consensus 320 ~~~~~~~~s~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (376)
++|+||+||+|+ ||.+.||.|||||+|.+|++|++||+++++|||+||++||++||
T Consensus 473 ~~r~~m~~slv~-ps~~~pC~~p~p~~~~~l~~~~~~k~~~~~~ve~we~~y~~~~~ 528 (528)
T KOG2458|consen 473 RERKFMDESLVM-PSDTAPCEMPPPYDPNELKEFLEKKESTTRQVEKWENKYWQKQN 528 (528)
T ss_pred hhhhhhhhcccc-ccccCcccCCCCCCcHHHHHHHHHHHhHHHHHHHHHHHHHhccC
Confidence 999999999998 99999999999999999999999999999999999999999986
No 2
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=100.00 E-value=1.2e-112 Score=857.77 Aligned_cols=368 Identities=53% Similarity=1.041 Sum_probs=356.5
Q ss_pred ChhhhcccCeEEEEEECCEEEEEeccccccchhhhHHHHHHHHHHhCCCCCCCeEEEEeCCCcccccccCCCCCCCCCCC
Q 017178 1 MIERARKTAHFRLVIVNGKAYVEKYKQSIQTRDKFTLWGILQLLRLYPGRLPDLELMFDCNDRPVVRARDFGGPNSGPPP 80 (376)
Q Consensus 1 ~~~~a~~~~~~r~~I~~GrlYv~~~~~~~~~R~~~~~~~ilqll~~~p~~lPDvef~~~~~D~P~~~~~~~~G~~~~~~P 80 (376)
|||+|++.|++|++|+||||||+.|++++++|++|++|||+||++++|++|||+||+|||+|+|.+.+..+.|...+++|
T Consensus 28 ~l~~~~~~~~~r~~I~~g~lYv~~~~~~~~tR~~~t~~~l~~ll~~~p~~lPD~Ef~~n~~D~P~~~~~~~~~~~~~~~P 107 (395)
T PF05686_consen 28 MLDRARRRAMFRYVIKDGRLYVESYREMFQTRDMFTLWGLLQLLRRYPGRLPDVEFMFNCDDWPVVRKDDYQGPSAPPPP 107 (395)
T ss_pred HHHHHHhcCceEEEEECCEEEEEecccccchhHHHHHHHHHHHHHhCcCCCCCeeEEeECCCCccccccccCCCCcchhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999988876664558999
Q ss_pred eeeeccCCCCCceeccCCCCccccccCcCchHHHHHHHHhccCCCCcccccCceEEeeCCCCchhHHHHHHhhhcCCCCc
Q 017178 81 LFRYCSDGSSLDIVFPDWSFWGWAETNIRPWSNVLKDIEEGNKRTKWKERVPYAYWRGNPNVSPIRKELMTCNASDKNDW 160 (376)
Q Consensus 81 lfs~ck~~~~~DIl~Pd~~fw~wpe~~i~~w~~~~~~i~~~~~~~pW~~K~p~afWRG~~~~~~~R~~L~~~~~~~~~~~ 160 (376)
||++|++.++.|||||||+|||||+++|++|+..+..+.+++..+||++|+|+|||||+++++..|++|++|+.+++..|
T Consensus 108 ifs~~~~~~~~DIl~Pd~~fwgw~e~~i~~w~~~~~~i~~~~~~~pW~~K~p~afWRG~~~~~~~R~~L~~~~~~~~~~~ 187 (395)
T PF05686_consen 108 IFSYCKSSDTADILFPDFSFWGWPEINIGPWDEDRKDIKEGNERVPWEDKKPKAFWRGSPTVAETRQRLVRCSRSHPDLW 187 (395)
T ss_pred heeeccccCcCccccCCccccccccccCCchHHHhhhhhccccCCChhhcccceEECCCcCCCcchhHHHHHhccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999988888999999998888999
Q ss_pred ccceeecccccccccCCccCCccccccccEEEeecCcccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCC
Q 017178 161 NARLYVQDWGQESKQNFKQSNLGDQCSHRYKIYIEGWAWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDN 240 (376)
Q Consensus 161 ~a~v~~~~w~~~~~~g~~~~~l~~~~~yKYli~ieG~~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d 240 (376)
+|+++.++|..+...+++.+++++||+|||+||+||++||+||||||+||||||++++.|+|||+++|+||+|||||+.+
T Consensus 188 ~a~i~~~d~~~~~~~~~~~~~l~~~~~yKYli~idG~~~S~RlkylL~c~SvVl~~~~~~~e~f~~~L~P~vHYVPV~~~ 267 (395)
T PF05686_consen 188 DARITKQDWDKEYKPGFKHVPLEDQCKYKYLIYIDGNAWSGRLKYLLACNSVVLKVKSPYYEFFYRALKPWVHYVPVKRD 267 (395)
T ss_pred eeeechhhhhhhccccccccCHHHHhhhheeecCCCceeehhHHHHHcCCceEEEeCCcHHHHHHhhhcccccEEEeccc
Confidence 99999999988877888899999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHHHhcCCCCCCCCcccccccccccccCCc
Q 017178 241 SKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKMGYVYDYMFHLLNEYARLLRFKPSIPAGALELCSETMACSAKGT 320 (376)
Q Consensus 241 ~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~~~~~~Y~~~LL~eYa~l~~~~P~~~~~a~e~~~e~~~c~~~~~ 320 (376)
..|+||+++|+|+++||++||+||++|++|++++|++++++|||++||+|||+||+|+|+++++++|||+|+|+|.++|.
T Consensus 268 ~d~sdL~~~v~w~~~~~~~A~~IA~~g~~f~~~~L~~~~~~~Y~~~LL~eYa~l~~~~p~~~~~~~ev~~~~~~~~~~~~ 347 (395)
T PF05686_consen 268 DDLSDLEEKVEWLNAHDDEAQRIAENGQRFAREYLTMEDVYCYWRRLLLEYAKLLRFKPTVPPGAEEVCPESMACPAEGR 347 (395)
T ss_pred cchhhHHHHhhhcccChHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCCCcCCCCceEechhhcCCCcccc
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhcccCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 017178 321 WRKFMEESMVKSPSDSIPCSLPPPYHPPALKNFTDTKVKLTRQVEAWE 368 (376)
Q Consensus 321 ~~~~~~~s~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (376)
+|+||++|+|++|+++.||+|||||+|++|++|++||+++++|||+||
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (395)
T PF05686_consen 348 ERKFMMESMVKSPSDTDPCTMPPPYDPEELKEFLERKENVIRQVEKWE 395 (395)
T ss_pred hhhHHHHhhccCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999997
No 3
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=100.00 E-value=2.7e-71 Score=527.97 Aligned_cols=249 Identities=57% Similarity=1.149 Sum_probs=229.6
Q ss_pred CCCCeEEEEeCCCcccccccCCCC-CCCCCCCeeeeccCCCCCceeccCCCCc-cccccCcCchHHHHHHHHhccCCCCc
Q 017178 50 RLPDLELMFDCNDRPVVRARDFGG-PNSGPPPLFRYCSDGSSLDIVFPDWSFW-GWAETNIRPWSNVLKDIEEGNKRTKW 127 (376)
Q Consensus 50 ~lPDvef~~~~~D~P~~~~~~~~G-~~~~~~Plfs~ck~~~~~DIl~Pd~~fw-~wpe~~i~~w~~~~~~i~~~~~~~pW 127 (376)
+|||+||+||++|+|.+.+.++.+ +...++||||+||..++.|||||||+|| |||+.++++|+..+.+|.+++..+||
T Consensus 1 ~lPD~ef~~n~~D~p~~~~~~~~~~~~~~~~Pifs~~k~~~~~DIl~P~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~pW 80 (256)
T smart00672 1 RVPDLELMFNCRDWPLINKKSFASYNQHAPPPLFSYCGSDEYLDIVFPDWSFWAGWPEVNGRPWDKDLMELEEGNKRTKW 80 (256)
T ss_pred CCCCeeeeeeCCCccccccCCCCCcccCCCCCeEEecCCCCCCceEecCHHHhCCCccccCcchHHHHHHHHhhhcCCCc
Confidence 589999999999999988765432 2256899999999999999999999999 99999999999999999998999999
Q ss_pred ccccCceEEeeCCCCchhHHHHHHhhhcCCCCcccceeecccc-----cccccCCccCCccccccccEEEeecCcccccc
Q 017178 128 KERVPYAYWRGNPNVSPIRKELMTCNASDKNDWNARLYVQDWG-----QESKQNFKQSNLGDQCSHRYKIYIEGWAWSVS 202 (376)
Q Consensus 128 ~~K~p~afWRG~~~~~~~R~~L~~~~~~~~~~~~a~v~~~~w~-----~~~~~g~~~~~l~~~~~yKYli~ieG~~~S~r 202 (376)
++|+++|||||+++++.+|++|++++++++..|||+++.++|. .+...+++.+++++||+|||+|++||++||+|
T Consensus 81 ~~K~~~a~WRG~~~~~~~R~~Lv~~~~~~p~~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yKyli~~dG~~~S~r 160 (256)
T smart00672 81 SDKNAYAYWRGNPTVASERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEGVAWSVR 160 (256)
T ss_pred cccCcCccccCCCCCCcchHHHHHHhcCCcccceeEEEEecCCCCChHHhcccCcCCCCHHHHhhcceEEecCCccchhh
Confidence 9999999999999887799999999988888899999988875 23345667799999999999999999999999
Q ss_pred hHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcchhhHHH
Q 017178 203 EKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKMGYVYD 282 (376)
Q Consensus 203 lk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~~~~~~ 282 (376)
|+++|+||||||++++.|+|||+++|+||+|||||+.|..++||+++|+|+++||++||+||++|++|++++|++++++|
T Consensus 161 l~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYvPv~~d~sd~~l~~~i~~~~~~~~~a~~Ia~~~~~~~~~~L~~~~~~~ 240 (256)
T smart00672 161 LKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCRELKEAVDWGNEHDKKAQEIGKRGSEFIQQNLSMEDVYD 240 (256)
T ss_pred HHHHHhcCceEEEeCCchhHHHHhcccCccceEEeeCCCchhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 99999999999999999999999999999999999999722339999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC
Q 017178 283 YMFHLLNEYARLLRFK 298 (376)
Q Consensus 283 Y~~~LL~eYa~l~~~~ 298 (376)
||++||+|||+||+|+
T Consensus 241 Y~~~ll~eya~l~~~~ 256 (256)
T smart00672 241 YMFHLLQEYAKLLKYK 256 (256)
T ss_pred HHHHHHHHHHHHhccC
Confidence 9999999999999985
No 4
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=98.03 E-value=2.2e-05 Score=62.66 Aligned_cols=82 Identities=9% Similarity=-0.000 Sum_probs=69.4
Q ss_pred cccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcc
Q 017178 197 WAWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLK 276 (376)
Q Consensus 197 ~~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~ 276 (376)
.+.+.|+--.|+||++||...+ .-+...+.++.|++-++ +. +|+.++++++.+||++.++||++|++++++..+
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~---~~~~~~~~~~~~~~~~~-~~--~el~~~i~~ll~~~~~~~~ia~~a~~~v~~~~t 82 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS---PGLREIFEDGEHIITYN-DP--EELAEKIEYLLENPEERRRIAKNARERVLKRHT 82 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh---HHHHHHcCCCCeEEEEC-CH--HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhCC
Confidence 4567788899999999998765 44445578899999998 43 899999999999999999999999999999998
Q ss_pred hhhHHHHH
Q 017178 277 MGYVYDYM 284 (376)
Q Consensus 277 ~~~~~~Y~ 284 (376)
-+.+..++
T Consensus 83 ~~~~~~~i 90 (92)
T PF13524_consen 83 WEHRAEQI 90 (92)
T ss_pred HHHHHHHH
Confidence 87766654
No 5
>PRK10307 putative glycosyl transferase; Provisional
Probab=81.72 E-value=6.4 Score=39.45 Aligned_cols=83 Identities=11% Similarity=0.035 Sum_probs=57.3
Q ss_pred ccchHHHHhcCCeeeeeccc---chhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcc
Q 017178 200 SVSEKYILACDSMTLIVRPR---YYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLK 276 (376)
Q Consensus 200 S~rlk~lL~~~SvvL~~~~~---~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~ 276 (376)
...+--.|+||-.|+..+.. ..+... ..-+ =+..++ .++|.++|..+.+++++.++++++|++++.+.++
T Consensus 321 p~kl~eama~G~PVi~s~~~g~~~~~~i~-----~~G~-~~~~~d-~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs 393 (412)
T PRK10307 321 PSKLTNMLASGRNVVATAEPGTELGQLVE-----GIGV-CVEPES-VEALVAAIAALARQALLRPKLGTVAREYAERTLD 393 (412)
T ss_pred cHHHHHHHHcCCCEEEEeCCCchHHHHHh-----CCcE-EeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcC
Confidence 34445568999999886532 122221 1112 122222 3789999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHH
Q 017178 277 MGYVYDYMFHLLN 289 (376)
Q Consensus 277 ~~~~~~Y~~~LL~ 289 (376)
.+.+..-+..+++
T Consensus 394 ~~~~~~~~~~~~~ 406 (412)
T PRK10307 394 KENVLRQFIADIR 406 (412)
T ss_pred HHHHHHHHHHHHH
Confidence 8877766655544
No 6
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.43 E-value=5.7 Score=40.21 Aligned_cols=85 Identities=14% Similarity=0.161 Sum_probs=63.2
Q ss_pred ccccEEEeec-------CcccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHH
Q 017178 186 CSHRYKIYIE-------GWAWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTE 258 (376)
Q Consensus 186 ~~yKYli~ie-------G~~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~ 258 (376)
-.++..+++. |.+.+.|.--+++|+...+ +.|.+-....++|+.-.+-..+. .|+.++++++.+||+
T Consensus 256 ~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~li---T~~~~~~e~~f~pgk~~iv~~d~---kdl~~~~~yll~h~~ 329 (373)
T COG4641 256 KRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLI---TDYWKDLEKFFKPGKDIIVYQDS---KDLKEKLKYLLNHPD 329 (373)
T ss_pred cccceeeeecHHHHHhhcCCchhhHHHHhhcCCccc---cccHHHHHHhcCCchheEEecCH---HHHHHHHHHHhcCcc
Confidence 4445555544 2345788899999999544 35677777777888877755554 799999999999999
Q ss_pred HHHHHHHHHHHHHHHHcc
Q 017178 259 KAEAIGEAASRFIREDLK 276 (376)
Q Consensus 259 ~A~~Ia~~g~~f~~~~L~ 276 (376)
++++||+.|-+=+...-+
T Consensus 330 erkeiae~~ye~V~~~ht 347 (373)
T COG4641 330 ERKEIAECAYERVLARHT 347 (373)
T ss_pred hHHHHHHhhHHHHHHhcc
Confidence 999999999886654433
No 7
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=80.56 E-value=6.6 Score=36.55 Aligned_cols=84 Identities=12% Similarity=-0.053 Sum_probs=59.7
Q ss_pred cccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcc
Q 017178 197 WAWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLK 276 (376)
Q Consensus 197 ~~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~ 276 (376)
.+++..+--.|+||-.||..+.. .+.+.+....+-+-+..+. .+++.+++..+.++++..+++++++++.+.+.++
T Consensus 286 ~~~~~~~~Ea~~~g~pvI~~~~~---~~~~~~~~~~~g~~~~~~~-~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (374)
T cd03801 286 EGFGLVLLEAMAAGLPVVASDVG---GIPEVVEDGETGLLVPPGD-PEALAEAILRLLDDPELRRRLGEAARERVAERFS 361 (374)
T ss_pred ccccchHHHHHHcCCcEEEeCCC---ChhHHhcCCcceEEeCCCC-HHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhcC
Confidence 35566777789999999987632 2223333344434444432 3789999999999999999999999988889988
Q ss_pred hhhHHHHH
Q 017178 277 MGYVYDYM 284 (376)
Q Consensus 277 ~~~~~~Y~ 284 (376)
.+.+..=+
T Consensus 362 ~~~~~~~~ 369 (374)
T cd03801 362 WDRVAART 369 (374)
T ss_pred HHHHHHHH
Confidence 77655433
No 8
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=80.51 E-value=7.9 Score=39.29 Aligned_cols=87 Identities=11% Similarity=0.068 Sum_probs=62.3
Q ss_pred cccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhh-cHHHHHHHHHHHHHHHHHHcch
Q 017178 199 WSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNA-HTEKAEAIGEAASRFIREDLKM 277 (376)
Q Consensus 199 ~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~-h~~~A~~Ia~~g~~f~~~~L~~ 277 (376)
+...+--.|+||-.|+..+.. -..+.+..+.+=+-+..++ .+++.+++..+.+ ++++.++++++|++++.+..+.
T Consensus 317 ~p~~llEAma~G~PVI~t~~~---g~~E~v~~~~~G~lv~~~d-~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~ 392 (406)
T PRK15427 317 IPVALMEAMAVGIPVVSTLHS---GIPELVEADKSGWLVPEND-AQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQ 392 (406)
T ss_pred ccHHHHHHHhCCCCEEEeCCC---CchhhhcCCCceEEeCCCC-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCH
Confidence 445567789999999876532 2233344555544444332 4789999999988 9999999999999999999998
Q ss_pred hhHHHHHHHHHH
Q 017178 278 GYVYDYMFHLLN 289 (376)
Q Consensus 278 ~~~~~Y~~~LL~ 289 (376)
+.+..=+.+++.
T Consensus 393 ~~~~~~l~~~~~ 404 (406)
T PRK15427 393 QVINRELASLLQ 404 (406)
T ss_pred HHHHHHHHHHHh
Confidence 876665555554
No 9
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=77.56 E-value=13 Score=35.99 Aligned_cols=85 Identities=8% Similarity=-0.060 Sum_probs=59.3
Q ss_pred ccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcchhh
Q 017178 200 SVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKMGY 279 (376)
Q Consensus 200 S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~~~ 279 (376)
+..+--.|+||-.|+..+.. -..+.+..+..-+-++.++ .+++..++..+.+++++.++|+++|.+++.+..+.+.
T Consensus 284 ~~~~~EAma~g~PvI~s~~~---~~~e~i~~~~~G~~~~~~~-~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~ 359 (371)
T cd04962 284 GLAALEAMACGVPVVASNAG---GIPEVVKHGETGFLVDVGD-VEAMAEYALSLLEDDELWQEFSRAARNRAAERFDSER 359 (371)
T ss_pred ccHHHHHHHcCCCEEEeCCC---CchhhhcCCCceEEcCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 33456678888888876543 2333444544434344332 4788899999889999999999999999888899887
Q ss_pred HHHHHHHHH
Q 017178 280 VYDYMFHLL 288 (376)
Q Consensus 280 ~~~Y~~~LL 288 (376)
+..-+..++
T Consensus 360 ~~~~~~~~y 368 (371)
T cd04962 360 IVPQYEALY 368 (371)
T ss_pred HHHHHHHHH
Confidence 766555544
No 10
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=76.67 E-value=11 Score=37.78 Aligned_cols=85 Identities=14% Similarity=0.068 Sum_probs=60.3
Q ss_pred CcccccchHHHHhcCCeeeeecccchhhhhcCC--CCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHH
Q 017178 196 GWAWSVSEKYILACDSMTLIVRPRYYDFFSRGM--VPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIRE 273 (376)
Q Consensus 196 G~~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L--~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~ 273 (376)
|.+....+--.|+||-.||..+.. ...+ ....+++- ..+ .+++.++|..+.++++..++|+++|++++.+
T Consensus 308 ~eG~~~~~lEAma~G~PVV~t~~~-----~~~i~~~~~~g~lv-~~~--~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~ 379 (397)
T TIGR03087 308 ARGIQNKVLEAMAMAKPVVASPEA-----AEGIDALPGAELLV-AAD--PADFAAAILALLANPAEREELGQAARRRVLQ 379 (397)
T ss_pred cCCcccHHHHHHHcCCCEEecCcc-----cccccccCCcceEe-CCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 334445567789999999986521 1222 24456653 244 3789999999999999999999999999998
Q ss_pred HcchhhHHHHHHHHH
Q 017178 274 DLKMGYVYDYMFHLL 288 (376)
Q Consensus 274 ~L~~~~~~~Y~~~LL 288 (376)
..+.+.+..-+..+|
T Consensus 380 ~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 380 HYHWPRNLARLDALL 394 (397)
T ss_pred hCCHHHHHHHHHHHh
Confidence 888776555444443
No 11
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=74.54 E-value=16 Score=34.21 Aligned_cols=78 Identities=17% Similarity=0.146 Sum_probs=55.7
Q ss_pred ccccchHHHHhcCCeeeeecccc-hhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcc
Q 017178 198 AWSVSEKYILACDSMTLIVRPRY-YDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLK 276 (376)
Q Consensus 198 ~~S~rlk~lL~~~SvvL~~~~~~-~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~ 276 (376)
+++..+--.|+||-.|+..+... .++..+ .--.++.. + .+++.+++..+.+++++.+++++++.+++++.++
T Consensus 280 ~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~----~g~~~~~~-~--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s 352 (365)
T cd03807 280 GFPNVLLEAMACGLPVVATDVGDNAELVGD----TGFLVPPG-D--PEALAEAIEALLADPALRQALGEAARERIEENFS 352 (365)
T ss_pred cCCcHHHHHHhcCCCEEEcCCCChHHHhhc----CCEEeCCC-C--HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCC
Confidence 45666777889999988866432 333332 22223222 2 3789999999999999999999999999999988
Q ss_pred hhhHHH
Q 017178 277 MGYVYD 282 (376)
Q Consensus 277 ~~~~~~ 282 (376)
.+.+..
T Consensus 353 ~~~~~~ 358 (365)
T cd03807 353 IEAMVE 358 (365)
T ss_pred HHHHHH
Confidence 775443
No 12
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=74.53 E-value=11 Score=36.51 Aligned_cols=82 Identities=12% Similarity=0.035 Sum_probs=57.6
Q ss_pred cccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcchh
Q 017178 199 WSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKMG 278 (376)
Q Consensus 199 ~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~~ 278 (376)
++..+--.|+||-.||..+.. -..+.+.....-+-+..+. .+++.+++..+.++++..++++++|++++.+.++.+
T Consensus 283 ~~~~~~EA~a~G~PvI~s~~~---~~~e~i~~~~~g~~~~~~d-~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~ 358 (367)
T cd05844 283 LPVVLLEAQASGVPVVATRHG---GIPEAVEDGETGLLVPEGD-VAALAAALGRLLADPDLRARMGAAGRRRVEERFDLR 358 (367)
T ss_pred CchHHHHHHHcCCCEEEeCCC---CchhheecCCeeEEECCCC-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHH
Confidence 455566788999999876542 1223334444434444322 378999999888999999999999999999998877
Q ss_pred hHHHHH
Q 017178 279 YVYDYM 284 (376)
Q Consensus 279 ~~~~Y~ 284 (376)
....-+
T Consensus 359 ~~~~~l 364 (367)
T cd05844 359 RQTAKL 364 (367)
T ss_pred HHHHHH
Confidence 655443
No 13
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=72.69 E-value=18 Score=33.72 Aligned_cols=81 Identities=11% Similarity=0.039 Sum_probs=57.6
Q ss_pred ccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcch
Q 017178 198 AWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKM 277 (376)
Q Consensus 198 ~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~ 277 (376)
+++..+--.|+||-+||..+..- ..+.+..+.+=+-+..+. .+++.+++..+.++++..++++++|++++.+.++.
T Consensus 275 ~~~~~~~Ea~~~G~Pvi~s~~~~---~~~~i~~~~~g~~~~~~~-~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~ 350 (359)
T cd03808 275 GLPRVLLEAMAMGRPVIATDVPG---CREAVIDGVNGFLVPPGD-AEALADAIERLIEDPELRARMGQAARKRAEEEFDE 350 (359)
T ss_pred CcchHHHHHHHcCCCEEEecCCC---chhhhhcCcceEEECCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCH
Confidence 45666777899999998865431 122333344434444432 37899999999999999999999999999888887
Q ss_pred hhHHH
Q 017178 278 GYVYD 282 (376)
Q Consensus 278 ~~~~~ 282 (376)
+.+..
T Consensus 351 ~~~~~ 355 (359)
T cd03808 351 EIVVK 355 (359)
T ss_pred HHHHH
Confidence 76543
No 14
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=72.68 E-value=21 Score=34.95 Aligned_cols=85 Identities=9% Similarity=-0.111 Sum_probs=56.4
Q ss_pred cccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcchh
Q 017178 199 WSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKMG 278 (376)
Q Consensus 199 ~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~~ 278 (376)
++..+--.|+||-.||..+.. -..+.+..+.+=+-+..++ .+++.+++..+.++++..+.++++|++.+.+.++.+
T Consensus 285 ~~~~~lEAma~G~Pvv~s~~~---g~~e~i~~~~~g~~~~~~d-~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~ 360 (374)
T TIGR03088 285 ISNTILEAMASGLPVIATAVG---GNPELVQHGVTGALVPPGD-AVALARALQPYVSDPAARRAHGAAGRARAEQQFSIN 360 (374)
T ss_pred CchHHHHHHHcCCCEEEcCCC---CcHHHhcCCCceEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 444556678888888876532 1122222333322233322 378999999999999999999999999999899887
Q ss_pred hHHHHHHHH
Q 017178 279 YVYDYMFHL 287 (376)
Q Consensus 279 ~~~~Y~~~L 287 (376)
.+..-+..+
T Consensus 361 ~~~~~~~~~ 369 (374)
T TIGR03088 361 AMVAAYAGL 369 (374)
T ss_pred HHHHHHHHH
Confidence 665544433
No 15
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=72.57 E-value=16 Score=34.69 Aligned_cols=78 Identities=14% Similarity=0.035 Sum_probs=55.1
Q ss_pred ccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcch
Q 017178 198 AWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKM 277 (376)
Q Consensus 198 ~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~ 277 (376)
+++..+-..|+||-.||..+... .+.+.....-+-+..++ .+++.+++..+.++++..+++++++.+++.+ ++.
T Consensus 281 ~~~~~~~Ea~a~G~PvI~~~~~~----~~~i~~~~~g~~~~~~d-~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~-~s~ 354 (366)
T cd03822 281 TQSGVLAYAIGFGKPVISTPVGH----AEEVLDGGTGLLVPPGD-PAALAEAIRRLLADPELAQALRARAREYARA-MSW 354 (366)
T ss_pred ccchHHHHHHHcCCCEEecCCCC----hheeeeCCCcEEEcCCC-HHHHHHHHHHHHcChHHHHHHHHHHHHHHhh-CCH
Confidence 66667777899999999866432 22233333333333322 3789999999999999999999999999977 776
Q ss_pred hhHH
Q 017178 278 GYVY 281 (376)
Q Consensus 278 ~~~~ 281 (376)
+.+.
T Consensus 355 ~~~~ 358 (366)
T cd03822 355 ERVA 358 (366)
T ss_pred HHHH
Confidence 6543
No 16
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=71.40 E-value=16 Score=36.57 Aligned_cols=83 Identities=12% Similarity=0.002 Sum_probs=56.7
Q ss_pred chHHHHhcCCeeeeecccchhhhhcCCCCCce---EEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcchh
Q 017178 202 SEKYILACDSMTLIVRPRYYDFFSRGMVPMQH---YWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKMG 278 (376)
Q Consensus 202 rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~H---YvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~~ 278 (376)
-+--.|+||-.|+..... -..+.+..+.+ .++- .| .+++.+++..+.++++. ++++++|++.+.+.++.+
T Consensus 293 ~~lEAma~G~PVI~s~~g---g~~Eiv~~~~~G~~l~~~-~d--~~~la~~I~~ll~d~~~-~~~~~~ar~~~~~~fsw~ 365 (380)
T PRK15484 293 VAVEAMAAGKPVLASTKG---GITEFVLEGITGYHLAEP-MT--SDSIISDINRTLADPEL-TQIAEQAKDFVFSKYSWE 365 (380)
T ss_pred HHHHHHHcCCCEEEeCCC---CcHhhcccCCceEEEeCC-CC--HHHHHHHHHHHHcCHHH-HHHHHHHHHHHHHhCCHH
Confidence 345567888888776532 11222333332 2221 23 37899999999999875 789999999999999988
Q ss_pred hHHHHHHHHHHHH
Q 017178 279 YVYDYMFHLLNEY 291 (376)
Q Consensus 279 ~~~~Y~~~LL~eY 291 (376)
.+..=+.++|..|
T Consensus 366 ~~a~~~~~~l~~~ 378 (380)
T PRK15484 366 GVTQRFEEQIHNW 378 (380)
T ss_pred HHHHHHHHHHHHh
Confidence 8777777777665
No 17
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=71.21 E-value=13 Score=35.22 Aligned_cols=79 Identities=11% Similarity=-0.021 Sum_probs=53.9
Q ss_pred cccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcchh
Q 017178 199 WSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKMG 278 (376)
Q Consensus 199 ~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~~ 278 (376)
.+..+--.|+||-.|+..+.... ...+.....-.-+..+. .+++.+++.-+.+++++.++++++|++++.+..+.+
T Consensus 312 ~p~~~~Ea~~~G~pvi~~~~~~~---~~~~~~~~~g~~~~~~~-~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 387 (394)
T cd03794 312 SPSKLFEYMAAGKPVLASVDGES---AELVEEAGAGLVVPPGD-PEALAAAILELLDDPEERAEMGENGRRYVEEKFSRE 387 (394)
T ss_pred CchHHHHHHHCCCcEEEecCCCc---hhhhccCCcceEeCCCC-HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhhcHH
Confidence 34456678889999887664322 12222222222233221 378999999999999999999999999999888877
Q ss_pred hHH
Q 017178 279 YVY 281 (376)
Q Consensus 279 ~~~ 281 (376)
.+.
T Consensus 388 ~~~ 390 (394)
T cd03794 388 KLA 390 (394)
T ss_pred HHH
Confidence 654
No 18
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=71.11 E-value=11 Score=38.37 Aligned_cols=81 Identities=9% Similarity=0.050 Sum_probs=55.6
Q ss_pred cchHHHHhcCCeeeeeccc-chhhhhcCCCCCce--EEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcch
Q 017178 201 VSEKYILACDSMTLIVRPR-YYDFFSRGMVPMQH--YWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKM 277 (376)
Q Consensus 201 ~rlk~lL~~~SvvL~~~~~-~~e~f~~~L~P~~H--YvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~ 277 (376)
.-+--.|+||-.|+..+.. ..|.. ....+ .+|..+ .++|.++|..+.++++.+++++++|++.+.+.++.
T Consensus 355 ~~~lEAma~G~PvV~s~~gg~~eiv----~~~~~G~lv~~~d---~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fsw 427 (439)
T TIGR02472 355 LTLLEAAACGLPIVATDDGGPRDII----ANCRNGLLVDVLD---LEAIASALEDALSDSSQWQLWSRNGIEGVRRHYSW 427 (439)
T ss_pred cHHHHHHHhCCCEEEeCCCCcHHHh----cCCCcEEEeCCCC---HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 3456678888888876532 22332 22222 233322 37899999999999999999999999999999987
Q ss_pred hhHHHHHHHHH
Q 017178 278 GYVYDYMFHLL 288 (376)
Q Consensus 278 ~~~~~Y~~~LL 288 (376)
+.+..=+..+|
T Consensus 428 ~~~~~~~~~l~ 438 (439)
T TIGR02472 428 DAHVEKYLRIL 438 (439)
T ss_pred HHHHHHHHHHh
Confidence 76655544444
No 19
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=70.34 E-value=10 Score=32.64 Aligned_cols=69 Identities=13% Similarity=0.032 Sum_probs=48.4
Q ss_pred ccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHH
Q 017178 198 AWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRF 270 (376)
Q Consensus 198 ~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f 270 (376)
+++..+---|+||.+||.... ..+.+.+.+..+-+-+.... ..++.++|.-+.++++..+.|+++|+++
T Consensus 104 ~~~~~~~Ea~~~g~pvI~~~~---~~~~e~~~~~~~g~~~~~~~-~~~l~~~i~~~l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 104 GFGLSLLEAMACGCPVIASDI---GGNNEIINDGVNGFLFDPND-IEELADAIEKLLNDPELRQKLGKNARER 172 (172)
T ss_dssp SS-HHHHHHHHTT-EEEEESS---THHHHHSGTTTSEEEESTTS-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccceeeccc---cCCceeeccccceEEeCCCC-HHHHHHHHHHHHCCHHHHHHHHHHhcCC
Confidence 455567778999999998763 33444455555433343322 4789999999999999999999999875
No 20
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=70.20 E-value=20 Score=35.12 Aligned_cols=77 Identities=16% Similarity=0.148 Sum_probs=52.4
Q ss_pred hHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCC-----cCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcch
Q 017178 203 EKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSK-----CTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKM 277 (376)
Q Consensus 203 lk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~-----~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~ 277 (376)
+--.|+||-.||..+.. ...+.+.....-+-+..+.. .+++.+++..+.+++++.++++++|++.+.+.++.
T Consensus 297 ~lEA~a~G~PvI~s~~~---~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~ 373 (388)
T TIGR02149 297 NLEAMACGTPVVASATG---GIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMGIAGRKRAEEEFSW 373 (388)
T ss_pred HHHHHHcCCCEEEeCCC---CHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 34568888888876542 22223334443333443320 14788899988899999999999999999888887
Q ss_pred hhHHH
Q 017178 278 GYVYD 282 (376)
Q Consensus 278 ~~~~~ 282 (376)
+.+..
T Consensus 374 ~~~~~ 378 (388)
T TIGR02149 374 GSIAK 378 (388)
T ss_pred HHHHH
Confidence 76544
No 21
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=70.19 E-value=22 Score=35.43 Aligned_cols=75 Identities=12% Similarity=-0.083 Sum_probs=53.0
Q ss_pred cchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcchhh
Q 017178 201 VSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKMGY 279 (376)
Q Consensus 201 ~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~~~ 279 (376)
..+--.|+||-.||..+.. -..+.+..+.+=+-+..++ .+++.++|..+.+++++.++|+++|++.+.++++.+.
T Consensus 315 ~~llEAmA~G~PVIas~~~---g~~e~i~~~~~G~lv~~~d-~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~fs~~~ 389 (396)
T cd03818 315 WSLLEAMACGCLVVGSDTA---PVREVITDGENGLLVDFFD-PDALAAAVIELLDDPARRARLRRAARRTALRYDLLSV 389 (396)
T ss_pred hHHHHHHHCCCCEEEcCCC---CchhhcccCCceEEcCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhccHHH
Confidence 3456678999999986643 2223334444433343322 3789999999999999999999999999988887654
No 22
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=67.57 E-value=13 Score=35.34 Aligned_cols=79 Identities=14% Similarity=0.040 Sum_probs=52.9
Q ss_pred ccccchHHHHhcCCeeeeecccc-hhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcc
Q 017178 198 AWSVSEKYILACDSMTLIVRPRY-YDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLK 276 (376)
Q Consensus 198 ~~S~rlk~lL~~~SvvL~~~~~~-~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~ 276 (376)
+++..+--.|+||-+||..+... .+.... .+..=.-+..++ .+++.+++..+.+++++.++|+++|++++.++.+
T Consensus 277 ~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~~~g~~~~~~d-~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s 352 (357)
T cd03795 277 AFGIVLLEAMAFGKPVISTEIGTGGSYVNL---HGVTGLVVPPGD-PAALAEAIRRLLEDPELRERLGEAARERAEEEFT 352 (357)
T ss_pred ccchHHHHHHHcCCCEEecCCCCchhHHhh---CCCceEEeCCCC-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHhcc
Confidence 33344566788899988765321 222221 122222233222 3789999999999999999999999999999888
Q ss_pred hhhH
Q 017178 277 MGYV 280 (376)
Q Consensus 277 ~~~~ 280 (376)
.+.+
T Consensus 353 ~~~~ 356 (357)
T cd03795 353 ADRM 356 (357)
T ss_pred hHhh
Confidence 6643
No 23
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=66.41 E-value=29 Score=33.17 Aligned_cols=79 Identities=15% Similarity=0.195 Sum_probs=53.3
Q ss_pred cccchHHHHhcCCeeeeeccc-chhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcch
Q 017178 199 WSVSEKYILACDSMTLIVRPR-YYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKM 277 (376)
Q Consensus 199 ~S~rlk~lL~~~SvvL~~~~~-~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~ 277 (376)
++..+--.|+||-+||..+.. ..|. +.....=+.+..+. .+++.+++..+.+++++.+++++++++++.+..+.
T Consensus 277 ~g~~~~Eam~~g~PvI~~~~~~~~e~----~~~~~~g~~~~~~~-~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~s~ 351 (365)
T cd03825 277 FPNTAIEALACGTPVVAFDVGGIPDI----VDHGVTGYLAKPGD-PEDLAEGIEWLLADPDEREELGEAARELAENEFDS 351 (365)
T ss_pred ccHHHHHHHhcCCCEEEecCCCChhh----eeCCCceEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCH
Confidence 455566788899998876532 2222 22222222333321 37899999999999999999999999999888876
Q ss_pred hhHHH
Q 017178 278 GYVYD 282 (376)
Q Consensus 278 ~~~~~ 282 (376)
+.+..
T Consensus 352 ~~~~~ 356 (365)
T cd03825 352 RVQAK 356 (365)
T ss_pred HHHHH
Confidence 64433
No 24
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=66.40 E-value=22 Score=34.00 Aligned_cols=79 Identities=18% Similarity=0.071 Sum_probs=54.0
Q ss_pred cccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcchh
Q 017178 199 WSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKMG 278 (376)
Q Consensus 199 ~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~~ 278 (376)
++..+--.|+||-+|+..+... ..+.+.....+++ .+ +++.+++..+.++++..++++++|++.+.+.++.+
T Consensus 281 ~~~~~~EAma~G~PvI~s~~~~---~~e~~~~~g~~~~--~~---~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 281 TNPSLLEAMAYGCPVLASDNPF---NREVLGDKAIYFK--VG---DDLASLLEELEADPEEVSAMAKAARERIREKYTWE 352 (363)
T ss_pred CChHHHHHHHcCCCEEEecCCc---cceeecCCeeEec--Cc---hHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 4445677888999998765431 1222222333332 22 23999999999999999999999999998888877
Q ss_pred hHHHHHH
Q 017178 279 YVYDYMF 285 (376)
Q Consensus 279 ~~~~Y~~ 285 (376)
.+..=+.
T Consensus 353 ~~~~~~~ 359 (363)
T cd04955 353 KIADQYE 359 (363)
T ss_pred HHHHHHH
Confidence 6544333
No 25
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=64.86 E-value=28 Score=34.26 Aligned_cols=81 Identities=9% Similarity=-0.007 Sum_probs=54.1
Q ss_pred chHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcchhhHH
Q 017178 202 SEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKMGYVY 281 (376)
Q Consensus 202 rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~~~~~ 281 (376)
.+--.|+||-.|+..+..- ..+.+..+..-+-+... +++..++..+.++++..++++++|.+.+.+.++.+.+.
T Consensus 289 ~~lEA~a~G~Pvv~s~~~~---~~~~i~~~~~g~~~~~~---~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~ 362 (372)
T cd03792 289 TVTEALWKGKPVIAGPVGG---IPLQIEDGETGFLVDTV---EEAAVRILYLLRDPELRRKMGANAREHVRENFLITRHL 362 (372)
T ss_pred HHHHHHHcCCCEEEcCCCC---chhhcccCCceEEeCCc---HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 4456678887777654321 12234444545545433 57788888888899999999999999998888877655
Q ss_pred HHHHHHH
Q 017178 282 DYMFHLL 288 (376)
Q Consensus 282 ~Y~~~LL 288 (376)
.=|..++
T Consensus 363 ~~~~~~~ 369 (372)
T cd03792 363 KDYLYLI 369 (372)
T ss_pred HHHHHHH
Confidence 4444333
No 26
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=64.83 E-value=30 Score=32.55 Aligned_cols=73 Identities=8% Similarity=-0.100 Sum_probs=54.7
Q ss_pred ccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHc
Q 017178 198 AWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDL 275 (376)
Q Consensus 198 ~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L 275 (376)
+++..+--.|+||-.||..+.. .+.+.+..+.+-.-+..+. .++.+++..+.++++..+++++++++++.++.
T Consensus 290 ~~~~~~~Ea~~~g~PvI~~~~~---~~~~~i~~~~~g~~~~~~~--~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 290 TQGLVLLEAMAAGLPVVAVDAP---GLPDLVADGENGFLFPPGD--EALAEALLRLLQDPELRRRLSKNAEESAEKFS 362 (374)
T ss_pred CcChHHHHHHHcCCcEEEeCCC---ChhhheecCceeEEeCCCC--HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 3445566789999999986643 3344455556666666553 28999999999999999999999999987665
No 27
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=64.29 E-value=28 Score=33.11 Aligned_cols=126 Identities=17% Similarity=0.205 Sum_probs=75.2
Q ss_pred CCceeccCCCCccccccCcCchHHHHHHHHhccCCCCcccccCceEEeeCCCCc------hhHHHHHHhhhcCCCCcccc
Q 017178 90 SLDIVFPDWSFWGWAETNIRPWSNVLKDIEEGNKRTKWKERVPYAYWRGNPNVS------PIRKELMTCNASDKNDWNAR 163 (376)
Q Consensus 90 ~~DIl~Pd~~fw~wpe~~i~~w~~~~~~i~~~~~~~pW~~K~p~afWRG~~~~~------~~R~~L~~~~~~~~~~~~a~ 163 (376)
..||++|-+.... ....+.. ....+..+|.-.++|+|+.... ..|..|+..-...+ .+.
T Consensus 152 ~~Di~~P~~~~~~----~~~~~~~--------~~~~~~~~R~~l~~f~g~~~~~~~~~~~~~r~~l~~~~~~~~-~~~-- 216 (302)
T PF03016_consen 152 GFDIVIPPFVPPS----SLPDWRP--------WPQRPPARRPYLLFFAGTIRPSSNDYSGGVRQRLLDECKSDP-DFR-- 216 (302)
T ss_pred CCCeecccccccc----ccCCccc--------cccCCccCCceEEEEeeeccccccccchhhhhHHHHhcccCC-cce--
Confidence 5789999986421 1111110 0245678899999999997542 46788776432222 111
Q ss_pred eeecccccccccCCccCCccccccccEEEeecCcc-cccchHHHHhcCCeeeeecccchhhhhcCCCCCceEE
Q 017178 164 LYVQDWGQESKQNFKQSNLGDQCSHRYKIYIEGWA-WSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYW 235 (376)
Q Consensus 164 v~~~~w~~~~~~g~~~~~l~~~~~yKYli~ieG~~-~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYv 235 (376)
+......... ...-++...+-||-+...|.+ +|.||--.|.+|++.+.....+.-=|.+.| +|.-+.
T Consensus 217 ~~~~~~~~~~----~~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~l-dw~~fs 284 (302)
T PF03016_consen 217 CSDGSETCPS----PSEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVL-DWSRFS 284 (302)
T ss_pred eeeccccccc----chHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCccccc-CHHHEE
Confidence 1110000000 011345668889999999996 899999999999999988655544444444 554444
No 28
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=63.60 E-value=9.8 Score=38.45 Aligned_cols=68 Identities=16% Similarity=0.208 Sum_probs=44.9
Q ss_pred hHHHHhcCCeeeeecc--cchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHH
Q 017178 203 EKYILACDSMTLIVRP--RYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIRED 274 (376)
Q Consensus 203 lk~lL~~~SvvL~~~~--~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~ 274 (376)
.---|+||..|+.... .+.+-. ..+...---+++.+ .++|.+++..+.++++.+++++++|++++.++
T Consensus 337 ~lEAma~G~PVI~g~~~~~~~e~~-~~~~~~g~~~~~~d---~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 337 PLEPAAFGVPVISGPHTFNFKEIF-ERLLQAGAAIQVED---AEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN 406 (425)
T ss_pred HHHHHHhCCCEEECCCccCHHHHH-HHHHHCCCeEEECC---HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC
Confidence 4557888888886321 122222 12222222334333 26899999999999999999999999999776
No 29
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=61.64 E-value=23 Score=33.64 Aligned_cols=79 Identities=11% Similarity=-0.008 Sum_probs=55.0
Q ss_pred ccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcch
Q 017178 198 AWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKM 277 (376)
Q Consensus 198 ~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~ 277 (376)
+++..+--.|+||-.||..... ...+.+.....=+-+..+. .+++.+++..+.++++..++++++|++++.+.++.
T Consensus 273 ~~~~~~~Ea~a~G~Pvi~~~~~---~~~~~i~~~~~g~~~~~~~-~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~ 348 (355)
T cd03799 273 GLPVVLMEAMAMGLPVISTDVS---GIPELVEDGETGLLVPPGD-PEALADAIERLLDDPELRREMGEAGRARVEEEFDI 348 (355)
T ss_pred CccHHHHHHHHcCCCEEecCCC---CcchhhhCCCceEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCH
Confidence 3455666678899998875532 2223344442333344322 47899999999999999999999999999888876
Q ss_pred hhH
Q 017178 278 GYV 280 (376)
Q Consensus 278 ~~~ 280 (376)
+.+
T Consensus 349 ~~~ 351 (355)
T cd03799 349 RKQ 351 (355)
T ss_pred HHH
Confidence 654
No 30
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=54.76 E-value=29 Score=34.01 Aligned_cols=74 Identities=8% Similarity=-0.018 Sum_probs=53.6
Q ss_pred hHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcchhhHH
Q 017178 203 EKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKMGYVY 281 (376)
Q Consensus 203 lk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~~~~~ 281 (376)
.--.|+||-.|+..+... ..+.+..+..-+-+..|. +++.+++..+.++++..++++++|.+++.+..+.+.+.
T Consensus 316 ~lEAma~G~PvI~s~~~~---~~e~i~~~~~g~~~~~~~--~~~a~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~ 389 (392)
T cd03805 316 PLEAMYAGKPVIACNSGG---PLETVVDGETGFLCEPTP--EEFAEAMLKLANDPDLADRMGAAGRKRVKEKFSTEAFA 389 (392)
T ss_pred HHHHHHcCCCEEEECCCC---cHHHhccCCceEEeCCCH--HHHHHHHHHHHhChHHHHHHHHHHHHHHHHhcCHHHHh
Confidence 456789999998776432 223344444443344443 78999999999999999999999999998888876543
No 31
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=54.66 E-value=63 Score=30.25 Aligned_cols=77 Identities=13% Similarity=0.220 Sum_probs=53.8
Q ss_pred ccccchHHHHhcCCeeeeeccc-chhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcc
Q 017178 198 AWSVSEKYILACDSMTLIVRPR-YYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLK 276 (376)
Q Consensus 198 ~~S~rlk~lL~~~SvvL~~~~~-~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~ 276 (376)
+++..+--.|+||-.|+..+.. ..+... ....++ +..+. +++.+++..+.+++++.++++++|.+++.+.++
T Consensus 293 ~~~~~~~Eama~G~PvI~~~~~~~~~~~~----~~~~~~-~~~~~--~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s 365 (375)
T cd03821 293 NFGIVVAEALACGTPVVTTDKVPWQELIE----YGCGWV-VDDDV--DALAAALRRALELPQRLKAMGENGRALVEERFS 365 (375)
T ss_pred CCCcHHHHHHhcCCCEEEcCCCCHHHHhh----cCceEE-eCCCh--HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcC
Confidence 3455566778999998876542 223322 222333 22332 789999999999999999999999999988888
Q ss_pred hhhHH
Q 017178 277 MGYVY 281 (376)
Q Consensus 277 ~~~~~ 281 (376)
.+.+.
T Consensus 366 ~~~~~ 370 (375)
T cd03821 366 WTAIA 370 (375)
T ss_pred HHHHH
Confidence 76543
No 32
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=48.96 E-value=89 Score=30.88 Aligned_cols=79 Identities=10% Similarity=0.029 Sum_probs=53.6
Q ss_pred cccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcchh
Q 017178 199 WSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKMG 278 (376)
Q Consensus 199 ~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~~ 278 (376)
++..+--.|+||-.||..+... ..+.+..+..-+.+..++ .+++.++|..+.++++..++++++|.+++ +.++.+
T Consensus 315 ~g~~~lEAma~G~Pvi~~~~~~---~~e~i~~~~~g~~~~~~d-~~~la~~i~~~l~~~~~~~~~~~~~~~~~-~~fsw~ 389 (405)
T TIGR03449 315 FGLVAMEAQACGTPVVAARVGG---LPVAVADGETGLLVDGHD-PADWADALARLLDDPRTRIRMGAAAVEHA-AGFSWA 389 (405)
T ss_pred cChHHHHHHHcCCCEEEecCCC---cHhhhccCCceEECCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHH-HhCCHH
Confidence 3445667788888888765321 222334445545555432 37899999988899999999999999987 457766
Q ss_pred hHHH
Q 017178 279 YVYD 282 (376)
Q Consensus 279 ~~~~ 282 (376)
.+..
T Consensus 390 ~~~~ 393 (405)
T TIGR03449 390 ATAD 393 (405)
T ss_pred HHHH
Confidence 5544
No 33
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=48.15 E-value=65 Score=30.17 Aligned_cols=73 Identities=7% Similarity=-0.111 Sum_probs=48.3
Q ss_pred cccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHH
Q 017178 197 WAWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIRE 273 (376)
Q Consensus 197 ~~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~ 273 (376)
-+++..+--.|+||-.|+..+... ..+.+.....=+-+..+. .+++.+++..+.++++..+.+++++++....
T Consensus 274 e~~~~~~~Ea~a~G~Pvi~~~~~~---~~e~i~~~~~g~~~~~~d-~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 346 (359)
T cd03823 274 ENFPLVIREALAAGVPVIASDIGG---MAELVRDGVNGLLFPPGD-AEDLAAALERLIDDPDLLERLRAGIEPPRSI 346 (359)
T ss_pred CCCChHHHHHHHCCCCEEECCCCC---HHHHhcCCCcEEEECCCC-HHHHHHHHHHHHhChHHHHHHHHhHHHhhhH
Confidence 345556667789999988766432 222233322222233322 3789999999999999999999999887644
No 34
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=47.63 E-value=65 Score=29.97 Aligned_cols=85 Identities=14% Similarity=0.061 Sum_probs=56.4
Q ss_pred ccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcch
Q 017178 198 AWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKM 277 (376)
Q Consensus 198 ~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~ 277 (376)
+++..+--.|+||..||..+... ..+.+.....=+-+..++ .+++.+++..+.+++.. +++.++.+.+.+.++.
T Consensus 290 ~~~~~~~Ea~~~G~pvI~~~~~~---~~~~~~~~~~g~~~~~~~-~~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~ 363 (377)
T cd03798 290 GFGLVLLEAMACGLPVVATDVGG---IPEIITDGENGLLVPPGD-PEALAEAILRLLADPWL--RLGRAARRRVAERFSW 363 (377)
T ss_pred cCChHHHHHHhcCCCEEEecCCC---hHHHhcCCcceeEECCCC-HHHHHHHHHHHhcCcHH--HHhHHHHHHHHHHhhH
Confidence 45666777899999999765432 222233444312233322 37888999999988887 7888999998888887
Q ss_pred hhHHHHHHHHH
Q 017178 278 GYVYDYMFHLL 288 (376)
Q Consensus 278 ~~~~~Y~~~LL 288 (376)
+.+..-+..++
T Consensus 364 ~~~~~~~~~~~ 374 (377)
T cd03798 364 ENVAERLLELY 374 (377)
T ss_pred HHHHHHHHHHH
Confidence 76555444444
No 35
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=46.26 E-value=82 Score=29.59 Aligned_cols=78 Identities=8% Similarity=-0.103 Sum_probs=52.8
Q ss_pred ccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcch
Q 017178 198 AWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKM 277 (376)
Q Consensus 198 ~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~ 277 (376)
+++..+--.|+||.+||..... ...+.+.....-+-+..+. .+++.+++..+.+|++..+++++++.+++ +..+.
T Consensus 278 ~~~~~~lEa~a~g~PvI~~~~~---~~~~~i~~~~~g~~~~~~~-~~~l~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~ 352 (364)
T cd03814 278 TFGLVVLEAMASGLPVVAPDAG---GPADIVTDGENGLLVEPGD-AEAFAAALAALLADPELRRRMAARARAEA-ERRSW 352 (364)
T ss_pred cCCcHHHHHHHcCCCEEEcCCC---CchhhhcCCcceEEcCCCC-HHHHHHHHHHHHcCHHHHHHHHHHHHHHH-hhcCH
Confidence 3455677789999999976643 2233344433333343332 25588999999999999999999999988 55665
Q ss_pred hhH
Q 017178 278 GYV 280 (376)
Q Consensus 278 ~~~ 280 (376)
+.+
T Consensus 353 ~~~ 355 (364)
T cd03814 353 EAF 355 (364)
T ss_pred HHH
Confidence 544
No 36
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=46.04 E-value=69 Score=32.32 Aligned_cols=78 Identities=10% Similarity=-0.058 Sum_probs=54.6
Q ss_pred cccchHHHHhcCCeeeeecccchhhhhcCCCCCce-E-EeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcc
Q 017178 199 WSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQH-Y-WPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLK 276 (376)
Q Consensus 199 ~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~H-Y-vPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~ 276 (376)
.+..+--.|+||-.||..+.. -..+.+..+.+ + ++-..+ .+++.++|..+.++++..++|+++|++++.+..+
T Consensus 323 ~p~~llEAma~G~PVIas~vg---g~~e~i~~~~~G~l~~~~~~--~~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~ 397 (407)
T cd04946 323 LPVSIMEAMSFGIPVIATNVG---GTPEIVDNGGNGLLLSKDPT--PNELVSSLSKFIDNEEEYQTMREKAREKWEENFN 397 (407)
T ss_pred ccHHHHHHHHcCCCEEeCCCC---CcHHHhcCCCcEEEeCCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcC
Confidence 455567789999999876532 12233334422 2 222223 3689999999999999999999999999999998
Q ss_pred hhhHH
Q 017178 277 MGYVY 281 (376)
Q Consensus 277 ~~~~~ 281 (376)
.+..+
T Consensus 398 ~~~~~ 402 (407)
T cd04946 398 ASKNY 402 (407)
T ss_pred HHHhH
Confidence 77544
No 37
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=45.12 E-value=75 Score=32.82 Aligned_cols=80 Identities=10% Similarity=-0.044 Sum_probs=51.6
Q ss_pred cccchHHHHhcCCeeeeeccc-chhhhhcCCCC---CceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHH
Q 017178 199 WSVSEKYILACDSMTLIVRPR-YYDFFSRGMVP---MQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIRED 274 (376)
Q Consensus 199 ~S~rlk~lL~~~SvvL~~~~~-~~e~f~~~L~P---~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~ 274 (376)
++..+--.|+||-.||..+.. ..|...+. .. +..=+-+..++ .+++.+++..+.++++..++++++|++.+.++
T Consensus 383 ~p~~vlEAma~G~PVVatd~g~~~elv~~~-~~~~~g~~G~lv~~~d-~~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~ 460 (475)
T cd03813 383 QPLVILEAMAAGIPVVATDVGSCRELIEGA-DDEALGPAGEVVPPAD-PEALARAILRLLKDPELRRAMGEAGRKRVERY 460 (475)
T ss_pred CChHHHHHHHcCCCEEECCCCChHHHhcCC-cccccCCceEEECCCC-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Confidence 344556678899988875432 23333220 00 11111122211 37899999999999999999999999999988
Q ss_pred cchhhH
Q 017178 275 LKMGYV 280 (376)
Q Consensus 275 L~~~~~ 280 (376)
.+.+.+
T Consensus 461 ~s~~~~ 466 (475)
T cd03813 461 YTLERM 466 (475)
T ss_pred CCHHHH
Confidence 885543
No 38
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=43.39 E-value=49 Score=31.26 Aligned_cols=75 Identities=11% Similarity=0.049 Sum_probs=50.9
Q ss_pred cccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcchh
Q 017178 199 WSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKMG 278 (376)
Q Consensus 199 ~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~~ 278 (376)
++..+--.|++|-+||..+.. .+.+.+.....+++..+ .+++.+++..+.++++..++++++|.+++ +..+.+
T Consensus 285 ~~~~~~Ea~a~G~pvI~~~~~---~~~e~~~~~~~~~~~~~---~~~~~~~i~~l~~~~~~~~~~~~~~~~~~-~~~sw~ 357 (365)
T cd03809 285 FGLPVLEAMACGTPVIASNIS---SLPEVAGDAALYFDPLD---PEALAAAIERLLEDPALREELRERGLARA-KRFSWE 357 (365)
T ss_pred CCCCHHHHhcCCCcEEecCCC---CccceecCceeeeCCCC---HHHHHHHHHHHhcCHHHHHHHHHHHHHHH-HhCCHH
Confidence 455567788999999876542 22222233444444332 37899999999999999999999999766 456554
Q ss_pred hH
Q 017178 279 YV 280 (376)
Q Consensus 279 ~~ 280 (376)
.+
T Consensus 358 ~~ 359 (365)
T cd03809 358 KT 359 (365)
T ss_pred HH
Confidence 43
No 39
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=40.14 E-value=1e+02 Score=29.82 Aligned_cols=77 Identities=12% Similarity=-0.058 Sum_probs=51.8
Q ss_pred chHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcchhhHH
Q 017178 202 SEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKMGYVY 281 (376)
Q Consensus 202 rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~~~~~ 281 (376)
.+--.|+||-.||..+.. ...+.+.....=+-+..++ .+++.++|..+.+++++.++++++|++++.+.++.+.+.
T Consensus 318 ~l~Ea~a~G~Pvi~s~~~---~~~e~i~~~~~g~~~~~~~-~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~ 393 (398)
T cd03800 318 TALEAMACGLPVVATAVG---GPRDIVVDGVTGLLVDPRD-PEALAAALRRLLTDPALRRRLSRAGLRRARARYTWERVA 393 (398)
T ss_pred HHHHHHhcCCCEEECCCC---CHHHHccCCCCeEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 355668888888765432 2222333333222233222 378999999998999999999999999998888876554
Q ss_pred H
Q 017178 282 D 282 (376)
Q Consensus 282 ~ 282 (376)
.
T Consensus 394 ~ 394 (398)
T cd03800 394 A 394 (398)
T ss_pred H
Confidence 3
No 40
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=38.11 E-value=52 Score=33.33 Aligned_cols=75 Identities=7% Similarity=-0.043 Sum_probs=51.9
Q ss_pred CcccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhc---HHHHHHHHHHHHHHHH
Q 017178 196 GWAWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAH---TEKAEAIGEAASRFIR 272 (376)
Q Consensus 196 G~~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h---~~~A~~Ia~~g~~f~~ 272 (376)
|.+.+..+--.|+||-.|+..... -..+.+..+..=+-+. | .++|.+++..+.++ +++.++++++|+++.+
T Consensus 327 ~~~~p~~~~Eama~G~PVI~s~~~---~~~eiv~~~~~G~lv~-d--~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~ 400 (415)
T cd03816 327 GLDLPMKVVDMFGCGLPVCALDFK---CIDELVKHGENGLVFG-D--SEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE 400 (415)
T ss_pred ccCCcHHHHHHHHcCCCEEEeCCC---CHHHHhcCCCCEEEEC-C--HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh
Confidence 344555666779999999886532 1223333443333343 4 38999999999888 9999999999999886
Q ss_pred HHcc
Q 017178 273 EDLK 276 (376)
Q Consensus 273 ~~L~ 276 (376)
+...
T Consensus 401 ~~~~ 404 (415)
T cd03816 401 LRWD 404 (415)
T ss_pred cCHH
Confidence 5544
No 41
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=36.15 E-value=1.7e+02 Score=30.07 Aligned_cols=72 Identities=13% Similarity=-0.007 Sum_probs=43.6
Q ss_pred chHHHHhcCCeeeeecccchhhhhcCCCC---CceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcchh
Q 017178 202 SEKYILACDSMTLIVRPRYYDFFSRGMVP---MQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKMG 278 (376)
Q Consensus 202 rlk~lL~~~SvvL~~~~~~~e~f~~~L~P---~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~~ 278 (376)
.+--.|+||-.||..+.. -..+.+.. +..=+=+..++ .+++.++|..+.++++..++++++|++.+. .++-+
T Consensus 347 ~vlEAmA~G~PVI~s~~g---g~~eiv~~~~~~~~G~lv~~~d-~~~la~~i~~ll~~~~~~~~~~~~a~~~~~-~fsw~ 421 (465)
T PLN02871 347 VVLEAMASGVPVVAARAG---GIPDIIPPDQEGKTGFLYTPGD-VDDCVEKLETLLADPELRERMGAAAREEVE-KWDWR 421 (465)
T ss_pred HHHHHHHcCCCEEEcCCC---CcHhhhhcCCCCCceEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-hCCHH
Confidence 345677788777755421 11111222 11111122221 378888999999999999999999999885 44433
No 42
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=35.70 E-value=89 Score=29.71 Aligned_cols=76 Identities=9% Similarity=-0.015 Sum_probs=50.0
Q ss_pred ccccchHHHHhcCCeeeeeccc-chhhhhcCCCCCceEEeccCCCCcCcHHHHH-HhhhhcHHHHHHHHHHHHHHHHHHc
Q 017178 198 AWSVSEKYILACDSMTLIVRPR-YYDFFSRGMVPMQHYWPIRDNSKCTSLKFAV-DWGNAHTEKAEAIGEAASRFIREDL 275 (376)
Q Consensus 198 ~~S~rlk~lL~~~SvvL~~~~~-~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v-~w~~~h~~~A~~Ia~~g~~f~~~~L 275 (376)
+++..+--.|+||-.|+..+.. ..|...+.. ..++ +..+. .+++.+++ ..+..++++.++++++|++++.++.
T Consensus 276 ~~~~~l~EA~a~G~PvI~~~~~~~~e~i~~~~---~g~~-~~~~~-~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f 350 (355)
T cd03819 276 AFGRTAVEAQAMGRPVIASDHGGARETVRPGE---TGLL-VPPGD-AEALAQALDQILSLLPEGRAKMFAKARMCVETLF 350 (355)
T ss_pred CCchHHHHHHhcCCCEEEcCCCCcHHHHhCCC---ceEE-eCCCC-HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhh
Confidence 4445566778888888876532 233332211 2233 33222 37888898 4667799999999999999998887
Q ss_pred chh
Q 017178 276 KMG 278 (376)
Q Consensus 276 ~~~ 278 (376)
+.+
T Consensus 351 ~~~ 353 (355)
T cd03819 351 SYD 353 (355)
T ss_pred hhc
Confidence 654
No 43
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=35.53 E-value=1.4e+02 Score=29.70 Aligned_cols=87 Identities=9% Similarity=0.021 Sum_probs=57.3
Q ss_pred ccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcchhh
Q 017178 200 SVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKMGY 279 (376)
Q Consensus 200 S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~~~ 279 (376)
...+--.|+||-.|+..+.. -..+.+......+. ..|. .++.+++..+.+++.+.+.+.+++.+++.+..+.+.
T Consensus 283 g~~~~EAma~G~PVI~s~~g---g~~e~i~~~~~~~~-~~~~--~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~fs~~~ 356 (398)
T cd03796 283 CIAIVEAASCGLLVVSTRVG---GIPEVLPPDMILLA-EPDV--ESIVRKLEEAISILRTGKHDPWSFHNRVKKMYSWED 356 (398)
T ss_pred CHHHHHHHHcCCCEEECCCC---CchhheeCCceeec-CCCH--HHHHHHHHHHHhChhhhhhHHHHHHHHHHhhCCHHH
Confidence 34567889999999876543 12222223333332 3332 789999999888888888889999999988888775
Q ss_pred HHHHHHHHHHHHHHHh
Q 017178 280 VYDYMFHLLNEYARLL 295 (376)
Q Consensus 280 ~~~Y~~~LL~eYa~l~ 295 (376)
+.. +++.-|.+++
T Consensus 357 ~~~---~~~~~y~~l~ 369 (398)
T cd03796 357 VAK---RTEKVYDRIL 369 (398)
T ss_pred HHH---HHHHHHHHHh
Confidence 544 3444455554
No 44
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=34.72 E-value=1.3e+02 Score=27.56 Aligned_cols=79 Identities=9% Similarity=-0.036 Sum_probs=50.9
Q ss_pred ccccchHHHHhcCCeeeeecccc-hhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcc
Q 017178 198 AWSVSEKYILACDSMTLIVRPRY-YDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLK 276 (376)
Q Consensus 198 ~~S~rlk~lL~~~SvvL~~~~~~-~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~ 276 (376)
+++..+--.|+||-.||..+... .+.. +.....=+-++..+ .+++.+++..+.++|+..++++++|.+++ +.++
T Consensus 264 ~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~---~~~~~~g~~~~~~~-~~~~~~~i~~ll~~~~~~~~~~~~~~~~~-~~~~ 338 (348)
T cd03820 264 GFPMVLLEAMAFGLPVISFDCPTGPSEI---IEDGVNGLLVPNGD-VEALAEALLRLMEDEELRKRMGANARESA-ERFS 338 (348)
T ss_pred ccCHHHHHHHHcCCCEEEecCCCchHhh---hccCcceEEeCCCC-HHHHHHHHHHHHcCHHHHHHHHHHHHHHH-HHhC
Confidence 34556777889999999765321 1111 12222223333322 37899999999999999999999997766 5566
Q ss_pred hhhHH
Q 017178 277 MGYVY 281 (376)
Q Consensus 277 ~~~~~ 281 (376)
.+.+.
T Consensus 339 ~~~~~ 343 (348)
T cd03820 339 IENII 343 (348)
T ss_pred HHHHH
Confidence 55443
No 45
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=33.43 E-value=1.8e+02 Score=27.44 Aligned_cols=84 Identities=13% Similarity=0.114 Sum_probs=51.0
Q ss_pred ccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhh-hcHHHHHHHHHHHHHHHHHHcc
Q 017178 198 AWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGN-AHTEKAEAIGEAASRFIREDLK 276 (376)
Q Consensus 198 ~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~-~h~~~A~~Ia~~g~~f~~~~L~ 276 (376)
+++..+--.|+||-+|+..+.. ...+.+.+.--.++. .| .+++.+++..+. ..++..+.++++ ++++.+.++
T Consensus 274 ~~~~~~~Ea~a~G~PvI~~~~~---~~~e~i~~~g~~~~~-~~--~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s 346 (360)
T cd04951 274 GFGLVVAEAMACELPVVATDAG---GVREVVGDSGLIVPI-SD--PEALANKIDEILKMSGEERDIIGAR-RERIVKKFS 346 (360)
T ss_pred CCChHHHHHHHcCCCEEEecCC---ChhhEecCCceEeCC-CC--HHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcC
Confidence 3445566778888888876532 222223333333333 23 268889998876 456666666666 888888888
Q ss_pred hhhHHHHHHHHH
Q 017178 277 MGYVYDYMFHLL 288 (376)
Q Consensus 277 ~~~~~~Y~~~LL 288 (376)
.+.+..-+..++
T Consensus 347 ~~~~~~~~~~~y 358 (360)
T cd04951 347 INSIVQQWLTLY 358 (360)
T ss_pred HHHHHHHHHHHh
Confidence 776655554443
No 46
>PF07788 DUF1626: Protein of unknown function (DUF1626); InterPro: IPR012431 This is a family consisting of sequences from hypothetical proteins of unknown function expressed by certain species of archaea. One member (Q9YCN7 from SWISSPROT) is thought to be similar to tropomyosin [].
Probab=31.92 E-value=1.8e+02 Score=22.43 Aligned_cols=50 Identities=22% Similarity=0.273 Sum_probs=33.6
Q ss_pred EEEEEECCEEEEEeccccccchhhhHHHHHHHHHHhCCCCCCCeEEEEeC
Q 017178 11 FRLVIVNGKAYVEKYKQSIQTRDKFTLWGILQLLRLYPGRLPDLELMFDC 60 (376)
Q Consensus 11 ~r~~I~~GrlYv~~~~~~~~~R~~~~~~~ilqll~~~p~~lPDvef~~~~ 60 (376)
+=++|+||.+|+....-+...-++..++-.-++..+.-++-+|--+++..
T Consensus 5 lDvvikdg~~ilvEikSs~~~~Dv~~f~rk~~lYek~~grk~~r~ivVtp 54 (70)
T PF07788_consen 5 LDVVIKDGKVILVEIKSSVSRGDVYIFKRKAELYEKVHGRKVDRLIVVTP 54 (70)
T ss_pred EEEEEECCeEEEEEEEccCCHHHHHHHHHHHHHHHHHHCCCcceEEEEEe
Confidence 35899999999988754444446666666677877765555454455543
No 47
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=29.29 E-value=1.8e+02 Score=32.76 Aligned_cols=81 Identities=10% Similarity=-0.076 Sum_probs=47.9
Q ss_pred HHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhh----hhcHHHHHHHHHHHHHHHHHHcchhh
Q 017178 204 KYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWG----NAHTEKAEAIGEAASRFIREDLKMGY 279 (376)
Q Consensus 204 k~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~----~~h~~~A~~Ia~~g~~f~~~~L~~~~ 279 (376)
---|+||-.|+..+.. =.-+.+..+++=.-|.... .+++.+++..+ .++|+..++|+++|.+.+.+..+-+.
T Consensus 661 LEAMAcGlPVVAT~~G---G~~EiV~dg~tGfLVdp~D-~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~ 736 (784)
T TIGR02470 661 LEAMTCGLPTFATRFG---GPLEIIQDGVSGFHIDPYH-GEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKI 736 (784)
T ss_pred HHHHHcCCCEEEcCCC---CHHHHhcCCCcEEEeCCCC-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 3456777777764421 1112233344333344332 36777777654 36899999999999998877777555
Q ss_pred HHHHHHHHH
Q 017178 280 VYDYMFHLL 288 (376)
Q Consensus 280 ~~~Y~~~LL 288 (376)
...-+..++
T Consensus 737 ~A~~ll~l~ 745 (784)
T TIGR02470 737 YSERLLTLA 745 (784)
T ss_pred HHHHHHHHH
Confidence 444443443
No 48
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=22.52 E-value=5.5e+02 Score=26.22 Aligned_cols=124 Identities=10% Similarity=0.085 Sum_probs=72.2
Q ss_pred CCcccccCceEEeeCCCC-chhHHHHHHhhhcCCCCcccceeecccccccccCCccCCccccccccEEEeecCccccc--
Q 017178 125 TKWKERVPYAYWRGNPNV-SPIRKELMTCNASDKNDWNARLYVQDWGQESKQNFKQSNLGDQCSHRYKIYIEGWAWSV-- 201 (376)
Q Consensus 125 ~pW~~K~p~afWRG~~~~-~~~R~~L~~~~~~~~~~~~a~v~~~~w~~~~~~g~~~~~l~~~~~yKYli~ieG~~~S~-- 201 (376)
-.|..|...+.|..+--. ...|.++++--..+ +..+++..-..+....+...--++-..+|||.|-+|-...--
T Consensus 190 ~~~~~k~~~~aw~vSnc~~~~~R~~~~~~L~k~---l~iD~YG~c~~~~~~~~~~~~~~~~~s~YKFyLAfENS~c~DYV 266 (372)
T KOG2619|consen 190 SILSAKTKLAAWLVSNCIPRSARLDYYKELMKH---LEIDSYGECLRKNANRDPSDCLLETLSHYKFYLAFENSNCEDYV 266 (372)
T ss_pred cccccccceeeeeccccCcchHHHHHHHHHHhh---CceeeccccccccccCCCCCcceeecccceEEEEecccCCcccc
Confidence 457889999999987422 24788877654223 333344332211111111111234456999999999764321
Q ss_pred --chHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHH---hhhhcHH
Q 017178 202 --SEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVD---WGNAHTE 258 (376)
Q Consensus 202 --rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~---w~~~h~~ 258 (376)
.|-..|-.+||.+...+.. +....|-.=||-|++- .++.+.++ .+.+|++
T Consensus 267 TEKfw~al~~gsVPVvlg~~n----~e~fvP~~SfI~vdDF---~s~~ela~ylk~L~~n~~ 321 (372)
T KOG2619|consen 267 TEKFWNALDAGSVPVVLGPPN----YENFVPPDSFIHVDDF---QSPQELAAYLKKLDKNPA 321 (372)
T ss_pred cHHHHhhhhcCcccEEECCcc----ccccCCCcceEehhhc---CCHHHHHHHHHHhhcCHH
Confidence 3336778899988877643 3455777778888763 45555444 4445553
No 49
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=22.22 E-value=2.6e+02 Score=27.06 Aligned_cols=79 Identities=14% Similarity=-0.026 Sum_probs=49.9
Q ss_pred ccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcch
Q 017178 198 AWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKM 277 (376)
Q Consensus 198 ~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~ 277 (376)
+++..+---|+||-+|+..+..+- -.+.+.++.+=.-+..+. .+++.++|..+.++++..++++++|.+.+ +.++.
T Consensus 290 g~~~~~lEAma~G~PvI~~~~~~g--~~~~v~~~~~G~lv~~~d-~~~la~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~ 365 (372)
T cd04949 290 GFGLSLMEALSHGLPVISYDVNYG--PSEIIEDGENGYLVPKGD-IEALAEAIIELLNDPKLLQKFSEAAYENA-ERYSE 365 (372)
T ss_pred ccChHHHHHHhCCCCEEEecCCCC--cHHHcccCCCceEeCCCc-HHHHHHHHHHHHcCHHHHHHHHHHHHHHH-HHhhH
Confidence 344445567888888887653321 112233333323333221 37899999999999999999999999885 45555
Q ss_pred hhH
Q 017178 278 GYV 280 (376)
Q Consensus 278 ~~~ 280 (376)
+.+
T Consensus 366 ~~~ 368 (372)
T cd04949 366 ENV 368 (372)
T ss_pred HHH
Confidence 443
No 50
>PF14782 BBS2_C: Ciliary BBSome complex subunit 2, C-terminal
Probab=20.02 E-value=1.1e+02 Score=31.82 Aligned_cols=57 Identities=16% Similarity=0.337 Sum_probs=40.4
Q ss_pred ccccccccCCchhhhhhhhcccCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 017178 310 SETMACSAKGTWRKFMEESMVKSPSDSIPCSLPPPYHPPALKNFTDTKVKLTRQVEAWENEY 371 (376)
Q Consensus 310 ~e~~~c~~~~~~~~~~~~s~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (376)
++-+.|+.+|..|-|+..+....- =.+...-+-+.|+++.+||+++..++...|++-
T Consensus 28 ~~lI~csvdGeVrGy~~~~~~~~~-----~~~~~~~~~~~lreL~qkKQ~Ll~EL~nyEe~~ 84 (431)
T PF14782_consen 28 PQLICCSVDGEVRGYLPDTQESKG-----TLVDASDEQEALRELSQKKQNLLLELRNYEENA 84 (431)
T ss_pred ceEEEEEcCCEEEEeccCcccccc-----ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456789999999999332222111 112334577899999999999999999888753
Done!