Query 017178
Match_columns 376
No_of_seqs 245 out of 829
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 10:12:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017178.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017178hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jjm_A Glycosyl transferase, g 85.7 3.7 0.00013 38.9 9.8 89 198-290 296-384 (394)
2 3okp_A GDP-mannose-dependent a 83.8 3.7 0.00013 38.4 8.8 93 198-298 291-383 (394)
3 3c48_A Predicted glycosyltrans 81.1 7.7 0.00026 37.0 10.1 87 198-289 337-423 (438)
4 3oy2_A Glycosyltransferase B73 80.3 3.8 0.00013 38.9 7.5 93 198-300 285-396 (413)
5 2gek_A Phosphatidylinositol ma 78.4 4.2 0.00014 38.3 7.1 105 187-299 282-388 (406)
6 3qhp_A Type 1 capsular polysac 77.6 6.4 0.00022 32.2 7.2 75 199-279 87-162 (166)
7 2x6q_A Trehalose-synthase TRET 76.1 7.5 0.00026 36.9 8.2 85 198-288 327-411 (416)
8 2bfw_A GLGA glycogen synthase; 72.2 8.6 0.00029 32.4 6.8 70 199-273 128-198 (200)
9 2r60_A Glycosyl transferase, g 69.9 15 0.00052 35.9 9.0 87 199-290 371-458 (499)
10 2iw1_A Lipopolysaccharide core 68.4 5 0.00017 37.2 4.8 87 198-291 282-371 (374)
11 3s28_A Sucrose synthase 1; gly 48.2 33 0.0011 36.9 7.4 90 199-292 677-770 (816)
12 3fro_A GLGA glycogen synthase; 46.2 35 0.0012 32.0 6.5 88 199-295 343-431 (439)
13 1rzu_A Glycogen synthase 1; gl 25.4 1.9E+02 0.0065 27.6 8.1 92 199-300 378-481 (485)
14 2qzs_A Glycogen synthase; glyc 22.2 1.9E+02 0.0064 27.6 7.4 86 199-294 379-476 (485)
15 2auh_B Growth factor receptor- 21.2 60 0.002 23.1 2.4 19 253-271 28-47 (59)
16 2f9f_A First mannosyl transfer 20.4 65 0.0022 26.5 3.1 66 199-269 110-176 (177)
No 1
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=85.66 E-value=3.7 Score=38.86 Aligned_cols=89 Identities=10% Similarity=0.005 Sum_probs=62.0
Q ss_pred ccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcch
Q 017178 198 AWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKM 277 (376)
Q Consensus 198 ~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~ 277 (376)
+++..+--.|+||-.|+..+.. -..+.+..+..=+-+..++ .+++.+++..+.++++..++++++|++++.+.++.
T Consensus 296 ~~~~~~~EAma~G~PvI~~~~~---~~~e~v~~~~~g~~~~~~d-~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~ 371 (394)
T 2jjm_A 296 SFGLVLLEAMACGVPCIGTRVG---GIPEVIQHGDTGYLCEVGD-TTGVADQAIQLLKDEELHRNMGERARESVYEQFRS 371 (394)
T ss_dssp SCCHHHHHHHHTTCCEEEECCT---TSTTTCCBTTTEEEECTTC-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCH
T ss_pred CCchHHHHHHhcCCCEEEecCC---ChHHHhhcCCceEEeCCCC-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCH
Confidence 4555667789999999987642 2223333333333344322 37899999999999999999999999999888988
Q ss_pred hhHHHHHHHHHHH
Q 017178 278 GYVYDYMFHLLNE 290 (376)
Q Consensus 278 ~~~~~Y~~~LL~e 290 (376)
+.+..-+..++.+
T Consensus 372 ~~~~~~~~~~~~~ 384 (394)
T 2jjm_A 372 EKIVSQYETIYYD 384 (394)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8766655555443
No 2
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=83.82 E-value=3.7 Score=38.37 Aligned_cols=93 Identities=9% Similarity=-0.004 Sum_probs=62.3
Q ss_pred ccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcch
Q 017178 198 AWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKM 277 (376)
Q Consensus 198 ~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~ 277 (376)
+++..+--.|+||-.||..+.. -..+.+..+ .=+-+..++ .+++.+++..+.++++..++++++|++++.+.++.
T Consensus 291 ~~~~~~~Ea~a~G~PvI~~~~~---~~~e~i~~~-~g~~~~~~d-~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~ 365 (394)
T 3okp_A 291 GLGIVYLEAQACGVPVIAGTSG---GAPETVTPA-TGLVVEGSD-VDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSW 365 (394)
T ss_dssp SSCHHHHHHHHTTCCEEECSST---TGGGGCCTT-TEEECCTTC-HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTBH
T ss_pred ccCcHHHHHHHcCCCEEEeCCC---ChHHHHhcC-CceEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 3444566678999999886542 233334444 333333322 37999999999999999999999999999998988
Q ss_pred hhHHHHHHHHHHHHHHHhcCC
Q 017178 278 GYVYDYMFHLLNEYARLLRFK 298 (376)
Q Consensus 278 ~~~~~Y~~~LL~eYa~l~~~~ 298 (376)
+.+..-+..+ |.++.+-+
T Consensus 366 ~~~~~~~~~~---~~~~~r~~ 383 (394)
T 3okp_A 366 EIMGERLTNI---LQSEPRKL 383 (394)
T ss_dssp HHHHHHHHHH---HHSCCC--
T ss_pred HHHHHHHHHH---HHHhccCc
Confidence 7665544444 44555443
No 3
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=81.14 E-value=7.7 Score=37.01 Aligned_cols=87 Identities=13% Similarity=0.020 Sum_probs=58.3
Q ss_pred ccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcch
Q 017178 198 AWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKM 277 (376)
Q Consensus 198 ~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~ 277 (376)
+++..+--.|+||-.||..+.. -..+.+..+..=+-+..++ .++|.++|..+.++++..++++++|++++.+ .+.
T Consensus 337 ~~~~~~~Eama~G~PvI~~~~~---~~~e~i~~~~~g~~~~~~d-~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-~s~ 411 (438)
T 3c48_A 337 SFGLVAMEAQASGTPVIAARVG---GLPIAVAEGETGLLVDGHS-PHAWADALATLLDDDETRIRMGEDAVEHART-FSW 411 (438)
T ss_dssp SSCHHHHHHHHTTCCEEEESCT---THHHHSCBTTTEEEESSCC-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-HHH
T ss_pred CCchHHHHHHHcCCCEEecCCC---ChhHHhhCCCcEEECCCCC-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh-CCH
Confidence 3455566778999998886542 2223344444333333322 3789999999999999999999999999988 776
Q ss_pred hhHHHHHHHHHH
Q 017178 278 GYVYDYMFHLLN 289 (376)
Q Consensus 278 ~~~~~Y~~~LL~ 289 (376)
+.+..-+..++.
T Consensus 412 ~~~~~~~~~~~~ 423 (438)
T 3c48_A 412 AATAAQLSSLYN 423 (438)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 665544444443
No 4
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=80.32 E-value=3.8 Score=38.94 Aligned_cols=93 Identities=10% Similarity=0.015 Sum_probs=61.3
Q ss_pred ccccchHHHHhcCCeeeeecccchhhhhcCCCCCce-------------------EEeccCCCCcCcHHHHHHhhhhcHH
Q 017178 198 AWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQH-------------------YWPIRDNSKCTSLKFAVDWGNAHTE 258 (376)
Q Consensus 198 ~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~H-------------------YvPv~~d~~~~dl~~~v~w~~~h~~ 258 (376)
+++..+--.|+||-.|+..+.. -..+.+..+.+ .++.. | .++|.+++ .+.++++
T Consensus 285 ~~~~~~lEAma~G~PvI~s~~~---g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~-d--~~~la~~i-~l~~~~~ 357 (413)
T 3oy2_A 285 GFGLCSAEGAVLGKPLIISAVG---GADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGII-D--VDDLVEAF-TFFKDEK 357 (413)
T ss_dssp SSCHHHHHHHTTTCCEEEECCH---HHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEEC-C--HHHHHHHH-HHTTSHH
T ss_pred CCCcHHHHHHHcCCCEEEcCCC---ChHHHHccCcccccccccccccccccCcceeeCCC-C--HHHHHHHH-HHhcCHH
Confidence 3444566678899888876542 22233344443 44433 2 37899999 9999999
Q ss_pred HHHHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHHHhcCCCC
Q 017178 259 KAEAIGEAASRFIREDLKMGYVYDYMFHLLNEYARLLRFKPS 300 (376)
Q Consensus 259 ~A~~Ia~~g~~f~~~~L~~~~~~~Y~~~LL~eYa~l~~~~P~ 300 (376)
..++++++|++++.+.++.+.+.. +++.-|.+++.-++.
T Consensus 358 ~~~~~~~~a~~~~~~~fs~~~~~~---~~~~~~~~~~~~~~~ 396 (413)
T 3oy2_A 358 NRKEYGKRVQDFVKTKPTWDDISS---DIIDFFNSLLRVESR 396 (413)
T ss_dssp HHHHHHHHHHHHHTTSCCHHHHHH---HHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHH---HHHHHHHHHHhhcCC
Confidence 999999999999988888776555 445555666655443
No 5
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=78.43 E-value=4.2 Score=38.27 Aligned_cols=105 Identities=10% Similarity=-0.039 Sum_probs=68.2
Q ss_pred cccEEEee--cCcccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHH
Q 017178 187 SHRYKIYI--EGWAWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIG 264 (376)
Q Consensus 187 ~yKYli~i--eG~~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia 264 (376)
.....|.. .+-+++..+--.|+||-.||..+.. -+.+.+..+.+=+-+..+. .+++.++|..+.++++..++++
T Consensus 282 ~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~---~~~e~i~~~~~g~~~~~~d-~~~l~~~i~~l~~~~~~~~~~~ 357 (406)
T 2gek_A 282 SADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLD---AFRRVLADGDAGRLVPVDD-ADGMAAALIGILEDDQLRAGYV 357 (406)
T ss_dssp HSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCH---HHHHHHTTTTSSEECCTTC-HHHHHHHHHHHHHCHHHHHHHH
T ss_pred HCCEEEecCCCCCCCchHHHHHHHcCCCEEEecCC---cHHHHhcCCCceEEeCCCC-HHHHHHHHHHHHcCHHHHHHHH
Confidence 33444443 2445566677789999999987642 2223333333333333222 3789999999999999999999
Q ss_pred HHHHHHHHHHcchhhHHHHHHHHHHHHHHHhcCCC
Q 017178 265 EAASRFIREDLKMGYVYDYMFHLLNEYARLLRFKP 299 (376)
Q Consensus 265 ~~g~~f~~~~L~~~~~~~Y~~~LL~eYa~l~~~~P 299 (376)
++|++++. ..+.+.+..-+.. -|.+++.-++
T Consensus 358 ~~~~~~~~-~~s~~~~~~~~~~---~~~~~~~~~~ 388 (406)
T 2gek_A 358 ARASERVH-RYDWSVVSAQIMR---VYETVSGAGI 388 (406)
T ss_dssp HHHHHHGG-GGBHHHHHHHHHH---HHHHHCCTTC
T ss_pred HHHHHHHH-hCCHHHHHHHHHH---HHHHHHhhcc
Confidence 99999997 7777766554444 4455665544
No 6
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=77.61 E-value=6.4 Score=32.17 Aligned_cols=75 Identities=7% Similarity=0.066 Sum_probs=48.7
Q ss_pred cccchHHHHhcCC-eeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcch
Q 017178 199 WSVSEKYILACDS-MTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKM 277 (376)
Q Consensus 199 ~S~rlk~lL~~~S-vvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~ 277 (376)
++..+--.|+||- .|+.... ..-....+.....+++..+ .+++.+++..+.++++..++++++|++++ +..+.
T Consensus 87 ~~~~~~Eama~G~vPvi~~~~--~~~~~~~~~~~~~~~~~~~---~~~l~~~i~~l~~~~~~~~~~~~~~~~~~-~~~s~ 160 (166)
T 3qhp_A 87 EAIACLEAISVGIVPVIANSP--LSATRQFALDERSLFEPNN---AKDLSAKIDWWLENKLERERMQNEYAKSA-LNYTL 160 (166)
T ss_dssp CCHHHHHHHHTTCCEEEECCT--TCGGGGGCSSGGGEECTTC---HHHHHHHHHHHHHCHHHHHHHHHHHHHHH-HHHC-
T ss_pred ccHHHHHHHhcCCCcEEeeCC--CCchhhhccCCceEEcCCC---HHHHHHHHHHHHhCHHHHHHHHHHHHHHH-HHCCh
Confidence 3445566799998 7776221 1112222334445555443 37899999999999999999999999998 55654
Q ss_pred hh
Q 017178 278 GY 279 (376)
Q Consensus 278 ~~ 279 (376)
+.
T Consensus 161 ~~ 162 (166)
T 3qhp_A 161 EN 162 (166)
T ss_dssp --
T ss_pred hh
Confidence 43
No 7
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=76.06 E-value=7.5 Score=36.94 Aligned_cols=85 Identities=11% Similarity=0.076 Sum_probs=59.2
Q ss_pred ccccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcch
Q 017178 198 AWSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKM 277 (376)
Q Consensus 198 ~~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~ 277 (376)
+++..+--.|+||-.|+..+.. -..+.+..+..=+-+. | .+++.+++..+.++++..++++++|++++.+.++.
T Consensus 327 ~~~~~~lEAma~G~PvI~~~~~---g~~e~i~~~~~g~l~~-d--~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~ 400 (416)
T 2x6q_A 327 GFGLTVTEAMWKGKPVIGRAVG---GIKFQIVDGETGFLVR-D--ANEAVEVVLYLLKHPEVSKEMGAKAKERVRKNFII 400 (416)
T ss_dssp SSCHHHHHHHHTTCCEEEESCH---HHHHHCCBTTTEEEES-S--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTBH
T ss_pred CCccHHHHHHHcCCCEEEccCC---CChhheecCCCeEEEC-C--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCH
Confidence 3455566779999999987642 2222333333222233 4 37899999999999999999999999999988887
Q ss_pred hhHHHHHHHHH
Q 017178 278 GYVYDYMFHLL 288 (376)
Q Consensus 278 ~~~~~Y~~~LL 288 (376)
+.+..-+..++
T Consensus 401 ~~~~~~~~~~~ 411 (416)
T 2x6q_A 401 TKHMERYLDIL 411 (416)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 76655444444
No 8
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=72.19 E-value=8.6 Score=32.37 Aligned_cols=70 Identities=4% Similarity=-0.057 Sum_probs=49.4
Q ss_pred cccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhh-cHHHHHHHHHHHHHHHHH
Q 017178 199 WSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNA-HTEKAEAIGEAASRFIRE 273 (376)
Q Consensus 199 ~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~-h~~~A~~Ia~~g~~f~~~ 273 (376)
++..+--.|+||-.|+..+... +.+.+ ...+-+-+..+. .+++.+++..+.+ +++..++++++|++++.+
T Consensus 128 ~~~~~~Ea~a~G~PvI~~~~~~---~~e~~-~~~~g~~~~~~~-~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 128 FGLVALEAMCLGAIPIASAVGG---LRDII-TNETGILVKAGD-PGELANAILKALELSRSDLSKFRENCKKRAMS 198 (200)
T ss_dssp SCHHHHHHHHTTCEEEEESCHH---HHHHC-CTTTCEEECTTC-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHCCCCEEEeCCCC---hHHHc-CCCceEEecCCC-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 4555677899999999876432 22223 333333333321 3789999999999 999999999999999876
No 9
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=69.90 E-value=15 Score=35.90 Aligned_cols=87 Identities=8% Similarity=-0.014 Sum_probs=58.7
Q ss_pred cccchHHHHhcCCeeeeeccc-chhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHHcch
Q 017178 199 WSVSEKYILACDSMTLIVRPR-YYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIREDLKM 277 (376)
Q Consensus 199 ~S~rlk~lL~~~SvvL~~~~~-~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~L~~ 277 (376)
++..+--.|+||-.||..+.. ..|. +..+.+=+-+..++ .+++.++|..+.++++..++++++|++++.+.++.
T Consensus 371 ~~~~~lEAma~G~PvI~s~~~g~~e~----v~~~~~g~l~~~~d-~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~ 445 (499)
T 2r60_A 371 FGLAPVEAMASGLPAVVTRNGGPAEI----LDGGKYGVLVDPED-PEDIARGLLKAFESEETWSAYQEKGKQRVEERYTW 445 (499)
T ss_dssp CCSHHHHHHHTTCCEEEESSBHHHHH----TGGGTSSEEECTTC-HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBH
T ss_pred CCcHHHHHHHcCCCEEEecCCCHHHH----hcCCceEEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 444566678899998887642 2333 33332212222221 37899999999999999999999999999998888
Q ss_pred hhHHHHHHHHHHH
Q 017178 278 GYVYDYMFHLLNE 290 (376)
Q Consensus 278 ~~~~~Y~~~LL~e 290 (376)
+.+..-+..++.+
T Consensus 446 ~~~~~~~~~~y~~ 458 (499)
T 2r60_A 446 QETARGYLEVIQE 458 (499)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7666554444443
No 10
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=68.36 E-value=5 Score=37.22 Aligned_cols=87 Identities=9% Similarity=-0.020 Sum_probs=58.4
Q ss_pred ccccchHHHHhcCCeeeeecc-cchhhhhcCCCCCceEEecc--CCCCcCcHHHHHHhhhhcHHHHHHHHHHHHHHHHHH
Q 017178 198 AWSVSEKYILACDSMTLIVRP-RYYDFFSRGMVPMQHYWPIR--DNSKCTSLKFAVDWGNAHTEKAEAIGEAASRFIRED 274 (376)
Q Consensus 198 ~~S~rlk~lL~~~SvvL~~~~-~~~e~f~~~L~P~~HYvPv~--~d~~~~dl~~~v~w~~~h~~~A~~Ia~~g~~f~~~~ 274 (376)
+++..+--.|+||-.|+..+. ...|...+ +..=+-+. .| .+++.+++..+.++++..++++++|++++.++
T Consensus 282 ~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~----~~~g~~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 355 (374)
T 2iw1_A 282 AAGIVLLEAITAGLPVLTTAVCGYAHYIAD----ANCGTVIAEPFS--QEQLNEVLRKALTQSPLRMAWAENARHYADTQ 355 (374)
T ss_dssp SSCHHHHHHHHHTCCEEEETTSTTTHHHHH----HTCEEEECSSCC--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHS
T ss_pred CcccHHHHHHHCCCCEEEecCCCchhhhcc----CCceEEeCCCCC--HHHHHHHHHHHHcChHHHHHHHHHHHHHHHHh
Confidence 445556677889999988764 22333322 22212222 23 37899999999999999999999999999766
Q ss_pred cchhhHHHHHHHHHHHH
Q 017178 275 LKMGYVYDYMFHLLNEY 291 (376)
Q Consensus 275 L~~~~~~~Y~~~LL~eY 291 (376)
+...+..-+..+|++|
T Consensus 356 -~~~~~~~~~~~~l~~~ 371 (374)
T 2iw1_A 356 -DLYSLPEKAADIITGG 371 (374)
T ss_dssp -CCSCHHHHHHHHHHCC
T ss_pred -hHHHHHHHHHHHHHHh
Confidence 6566666666666543
No 11
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=48.24 E-value=33 Score=36.91 Aligned_cols=90 Identities=10% Similarity=0.006 Sum_probs=60.1
Q ss_pred cccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhh----hcHHHHHHHHHHHHHHHHHH
Q 017178 199 WSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGN----AHTEKAEAIGEAASRFIRED 274 (376)
Q Consensus 199 ~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~----~h~~~A~~Ia~~g~~f~~~~ 274 (376)
++.-+--.|+||-.|+..+.. -..+.+..+.+=+-+..++ .+++.++|..+. ++++..++++++|++++.+.
T Consensus 677 fglvllEAMA~G~PVIasd~G---G~~EiV~dg~~Gllv~p~D-~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~ 752 (816)
T 3s28_A 677 FGLTVVEAMTCGLPTFATCKG---GPAEIIVHGKSGFHIDPYH-GDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEK 752 (816)
T ss_dssp SCHHHHHHHHTTCCEEEESSB---THHHHCCBTTTBEEECTTS-HHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHS
T ss_pred ccHHHHHHHHcCCCEEEeCCC---ChHHHHccCCcEEEeCCCC-HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHh
Confidence 444456678999999986532 1222233343333344322 367888885544 89999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHH
Q 017178 275 LKMGYVYDYMFHLLNEYA 292 (376)
Q Consensus 275 L~~~~~~~Y~~~LL~eYa 292 (376)
++.+.+..-+..+...|.
T Consensus 753 fSwe~~a~~ll~lY~~~g 770 (816)
T 3s28_A 753 YTWQIYSQRLLTLTGVYG 770 (816)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 988877666666665554
No 12
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=46.19 E-value=35 Score=32.00 Aligned_cols=88 Identities=5% Similarity=-0.014 Sum_probs=57.2
Q ss_pred cccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhh-cHHHHHHHHHHHHHHHHHHcch
Q 017178 199 WSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNA-HTEKAEAIGEAASRFIREDLKM 277 (376)
Q Consensus 199 ~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~-h~~~A~~Ia~~g~~f~~~~L~~ 277 (376)
++..+--.|+||-.|+..+.. -..+.+..+.- +-+..++ .+++.+++..+.+ +++..++++++|++++ +.++.
T Consensus 343 ~~~~~~EAma~G~Pvi~s~~~---~~~e~~~~~~g-~~~~~~d-~~~la~~i~~ll~~~~~~~~~~~~~~~~~~-~~~s~ 416 (439)
T 3fro_A 343 FGLVALEAMCLGAIPIASAVG---GLRDIITNETG-ILVKAGD-PGELANAILKALELSRSDLSKFRENCKKRA-MSFSW 416 (439)
T ss_dssp SCHHHHHHHHTTCEEEEESST---HHHHHCCTTTC-EEECTTC-HHHHHHHHHHHHHHTTTTTHHHHHHHHHHH-HTSCH
T ss_pred ccHHHHHHHHCCCCeEEcCCC---CcceeEEcCce-EEeCCCC-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-hhCcH
Confidence 344455678999999987643 22223333322 2233322 3789999998887 8999999999999999 66877
Q ss_pred hhHHHHHHHHHHHHHHHh
Q 017178 278 GYVYDYMFHLLNEYARLL 295 (376)
Q Consensus 278 ~~~~~Y~~~LL~eYa~l~ 295 (376)
+.+.. +++.-|.+++
T Consensus 417 ~~~~~---~~~~~~~~~~ 431 (439)
T 3fro_A 417 EKSAE---RYVKAYTGSI 431 (439)
T ss_dssp HHHHH---HHHHHHHTCS
T ss_pred HHHHH---HHHHHHHHHH
Confidence 65443 4444455554
No 13
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=25.41 E-value=1.9e+02 Score=27.61 Aligned_cols=92 Identities=10% Similarity=0.070 Sum_probs=54.6
Q ss_pred cccchHHHHhcCCeeeeecccchhhhhcCCCCC---------ceEEeccCCCCcCcHHHHHHhhh---hcHHHHHHHHHH
Q 017178 199 WSVSEKYILACDSMTLIVRPRYYDFFSRGMVPM---------QHYWPIRDNSKCTSLKFAVDWGN---AHTEKAEAIGEA 266 (376)
Q Consensus 199 ~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~---------~HYvPv~~d~~~~dl~~~v~w~~---~h~~~A~~Ia~~ 266 (376)
++..+--.|+||-.||..+.. -..+.+..+ .+=+-+..++ .++|.++|..+. ++++..++++++
T Consensus 378 ~~~~~lEAma~G~PvI~s~~g---g~~e~v~~~~~~~~~~~~~~G~l~~~~d-~~~la~~i~~ll~~~~~~~~~~~~~~~ 453 (485)
T 1rzu_A 378 CGLTQLYALRYGCIPVVARTG---GLADTVIDANHAALASKAATGVQFSPVT-LDGLKQAIRRTVRYYHDPKLWTQMQKL 453 (485)
T ss_dssp SCSHHHHHHHHTCEEEEESSH---HHHHHCCBCCHHHHHTTCCCBEEESSCS-HHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred CCHHHHHHHHCCCCEEEeCCC---ChhheecccccccccccCCcceEeCCCC-HHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 344456678888888876542 222233333 2222233322 378999999887 799999999999
Q ss_pred HHHHHHHHcchhhHHHHHHHHHHHHHHHhcCCCC
Q 017178 267 ASRFIREDLKMGYVYDYMFHLLNEYARLLRFKPS 300 (376)
Q Consensus 267 g~~f~~~~L~~~~~~~Y~~~LL~eYa~l~~~~P~ 300 (376)
|.+ +.++.+.+ ..+++.-|.+++.-+++
T Consensus 454 ~~~---~~fs~~~~---~~~~~~~y~~~~~~~~~ 481 (485)
T 1rzu_A 454 GMK---SDVSWEKS---AGLYAALYSQLISKGHH 481 (485)
T ss_dssp HHT---CCCBHHHH---HHHHHHHHHHHTC----
T ss_pred HHH---HhCChHHH---HHHHHHHHHHhhCCCCC
Confidence 864 45555544 44556667777655543
No 14
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=22.24 E-value=1.9e+02 Score=27.63 Aligned_cols=86 Identities=15% Similarity=0.115 Sum_probs=50.9
Q ss_pred cccchHHHHhcCCeeeeecccchhhhhcCCCCC---------ceEEeccCCCCcCcHHHHHHhhh---hcHHHHHHHHHH
Q 017178 199 WSVSEKYILACDSMTLIVRPRYYDFFSRGMVPM---------QHYWPIRDNSKCTSLKFAVDWGN---AHTEKAEAIGEA 266 (376)
Q Consensus 199 ~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~---------~HYvPv~~d~~~~dl~~~v~w~~---~h~~~A~~Ia~~ 266 (376)
++..+--.|+||-.||..+.. -..+.+..+ ..=+-+..++ .++|.++|..+. ++++..++++++
T Consensus 379 ~g~~~lEAma~G~PvI~s~~g---g~~e~v~~~~~~~~~~~~~~G~l~~~~d-~~~la~~i~~ll~~~~~~~~~~~~~~~ 454 (485)
T 2qzs_A 379 CGLTQLYGLKYGTLPLVRRTG---GLADTVSDCSLENLADGVASGFVFEDSN-AWSLLRAIRRAFVLWSRPSLWRFVQRQ 454 (485)
T ss_dssp SCSHHHHHHHHTCEEEEESSH---HHHHHCCBCCHHHHHTTCCCBEEECSSS-HHHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred CcHHHHHHHHCCCCEEECCCC---CccceeccCccccccccccceEEECCCC-HHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 344456678888888876532 222223332 2222233221 378999999887 799999999999
Q ss_pred HHHHHHHHcchhhHHHHHHHHHHHHHHH
Q 017178 267 ASRFIREDLKMGYVYDYMFHLLNEYARL 294 (376)
Q Consensus 267 g~~f~~~~L~~~~~~~Y~~~LL~eYa~l 294 (376)
|.+ +.++.+.+.. +++.-|.++
T Consensus 455 ~~~---~~fs~~~~~~---~~~~ly~~~ 476 (485)
T 2qzs_A 455 AMA---MDFSWQVAAK---SYRELYYRL 476 (485)
T ss_dssp HHH---CCCCHHHHHH---HHHHHHHHH
T ss_pred HHh---hcCCHHHHHH---HHHHHHHHh
Confidence 864 4556554443 344445444
No 15
>2auh_B Growth factor receptor-bound protein 14; tyrosine kinase, BPS region, transferase/signaling protein complex; HET: PTR; 3.20A {Homo sapiens}
Probab=21.18 E-value=60 Score=23.12 Aligned_cols=19 Identities=11% Similarity=0.059 Sum_probs=15.8
Q ss_pred hhhcHHHHHHHH-HHHHHHH
Q 017178 253 GNAHTEKAEAIG-EAASRFI 271 (376)
Q Consensus 253 ~~~h~~~A~~Ia-~~g~~f~ 271 (376)
..+||.||+.|| ++|+.|-
T Consensus 28 vIenP~Ea~s~a~eeg~~Wr 47 (59)
T 2auh_B 28 VIENPTEALSVAVEEGLAWR 47 (59)
T ss_dssp BCCCHHHHHHHHHHHHHHHH
T ss_pred eecChHHHHHHHHHhhhhhc
Confidence 468999999999 7788774
No 16
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=20.40 E-value=65 Score=26.51 Aligned_cols=66 Identities=9% Similarity=0.078 Sum_probs=40.6
Q ss_pred cccchHHHHhcCCeeeeecccchhhhhcCCCCCceEEeccCCCCcCcHHHHHHhhhhcHHH-HHHHHHHHHH
Q 017178 199 WSVSEKYILACDSMTLIVRPRYYDFFSRGMVPMQHYWPIRDNSKCTSLKFAVDWGNAHTEK-AEAIGEAASR 269 (376)
Q Consensus 199 ~S~rlk~lL~~~SvvL~~~~~~~e~f~~~L~P~~HYvPv~~d~~~~dl~~~v~w~~~h~~~-A~~Ia~~g~~ 269 (376)
++..+--.|+||-.||..+.. .+.+.+.....=+-+..+ .+++.++|..+.++++. .+++.++|++
T Consensus 110 ~~~~~~Eama~G~PvI~~~~~---~~~e~i~~~~~g~~~~~d--~~~l~~~i~~l~~~~~~~~~~~~~~a~~ 176 (177)
T 2f9f_A 110 FGLTPIEAMASGKPVIAVNEG---GFKETVINEKTGYLVNAD--VNEIIDAMKKVSKNPDKFKKDCFRRAKE 176 (177)
T ss_dssp SCHHHHHHHHTTCCEEEESSH---HHHHHCCBTTTEEEECSC--HHHHHHHHHHHHHCTTTTHHHHHHHHHT
T ss_pred CChHHHHHHHcCCcEEEeCCC---CHHHHhcCCCccEEeCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHhc
Confidence 444566788999999987643 222223333322222333 37899999999888876 5666666554
Done!