Query 017179
Match_columns 376
No_of_seqs 385 out of 2415
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 10:13:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017179.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017179hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t7v_A Methylornithine synthas 99.9 2.2E-26 7.5E-31 226.2 17.1 235 91-339 24-264 (350)
2 3iix_A Biotin synthetase, puta 99.9 2.1E-23 7.2E-28 203.8 22.9 227 91-337 16-253 (348)
3 2qgq_A Protein TM_1862; alpha- 99.9 2.3E-23 7.7E-28 201.8 20.4 213 129-345 4-231 (304)
4 1r30_A Biotin synthase; SAM ra 99.9 4.4E-22 1.5E-26 197.2 22.7 231 93-339 33-274 (369)
5 1olt_A Oxygen-independent copr 99.7 5.4E-17 1.9E-21 165.4 17.4 218 129-356 53-295 (457)
6 1tv8_A MOAA, molybdenum cofact 99.6 7E-15 2.4E-19 143.4 19.9 172 132-315 17-198 (340)
7 3c8f_A Pyruvate formate-lyase 99.6 5.1E-14 1.7E-18 129.0 15.7 204 129-345 20-243 (245)
8 2yx0_A Radical SAM enzyme; pre 99.5 6.9E-13 2.4E-17 129.6 18.3 204 137-352 79-318 (342)
9 2z2u_A UPF0026 protein MJ0257; 99.4 2.7E-12 9.4E-17 123.3 11.6 203 133-353 55-296 (311)
10 2a5h_A L-lysine 2,3-aminomutas 99.2 7.7E-10 2.6E-14 111.6 19.1 161 131-309 117-289 (416)
11 3rfa_A Ribosomal RNA large sub 99.1 1.9E-09 6.5E-14 108.4 16.7 199 135-345 121-341 (404)
12 3can_A Pyruvate-formate lyase- 98.4 3.9E-06 1.3E-10 74.0 12.6 161 175-347 5-180 (182)
13 2cw6_A Hydroxymethylglutaryl-C 97.9 6.9E-05 2.4E-09 71.9 10.7 145 156-310 23-176 (298)
14 4fhd_A Spore photoproduct lyas 97.7 6E-05 2E-09 74.8 8.1 164 131-301 109-282 (368)
15 2ftp_A Hydroxymethylglutaryl-C 97.7 0.00046 1.6E-08 66.3 13.3 142 156-310 26-179 (302)
16 1ydo_A HMG-COA lyase; TIM-barr 97.6 0.00066 2.2E-08 65.6 13.9 142 156-310 24-177 (307)
17 1ydn_A Hydroxymethylglutaryl-C 97.6 0.00044 1.5E-08 66.0 12.6 143 156-310 22-175 (295)
18 3ble_A Citramalate synthase fr 97.1 0.003 1E-07 61.7 10.8 138 156-310 37-189 (337)
19 3ewb_X 2-isopropylmalate synth 96.7 0.025 8.4E-07 54.1 13.8 142 156-310 23-170 (293)
20 3eeg_A 2-isopropylmalate synth 96.7 0.025 8.5E-07 54.9 13.8 142 156-310 24-171 (325)
21 1nvm_A HOA, 4-hydroxy-2-oxoval 96.5 0.012 4E-07 57.6 10.3 137 156-309 26-168 (345)
22 3ivs_A Homocitrate synthase, m 96.2 0.054 1.8E-06 54.5 13.3 142 156-310 57-200 (423)
23 3rmj_A 2-isopropylmalate synth 95.9 0.059 2E-06 53.3 11.7 139 156-310 30-177 (370)
24 1rqb_A Transcarboxylase 5S sub 95.7 0.072 2.5E-06 55.2 12.1 135 156-310 43-195 (539)
25 2nx9_A Oxaloacetate decarboxyl 95.6 0.1 3.5E-06 53.1 12.6 135 156-310 26-178 (464)
26 2ztj_A Homocitrate synthase; ( 95.3 0.13 4.6E-06 50.8 12.2 140 156-310 21-164 (382)
27 4e38_A Keto-hydroxyglutarate-a 93.8 1.2 4E-05 41.2 13.7 114 157-312 43-156 (232)
28 3lab_A Putative KDPG (2-keto-3 93.8 1.2 3.9E-05 40.9 13.5 113 157-311 22-140 (217)
29 1aj0_A DHPS, dihydropteroate s 93.1 1.1 3.6E-05 42.6 12.6 140 156-303 34-208 (282)
30 3dxi_A Putative aldolase; TIM 92.7 0.38 1.3E-05 46.5 9.0 137 156-310 20-163 (320)
31 1eye_A DHPS 1, dihydropteroate 92.2 3.3 0.00011 39.1 14.6 138 156-302 25-199 (280)
32 2yci_X 5-methyltetrahydrofolat 91.6 4.1 0.00014 38.2 14.4 136 157-303 31-193 (271)
33 2y7e_A 3-keto-5-aminohexanoate 91.1 3.1 0.0001 39.5 13.0 80 156-236 30-111 (282)
34 3chv_A Prokaryotic domain of u 90.8 1.6 5.4E-05 41.5 10.7 83 156-239 30-113 (284)
35 3vnd_A TSA, tryptophan synthas 90.3 1.4 4.7E-05 41.5 9.8 146 194-347 4-178 (267)
36 1h5y_A HISF; histidine biosynt 89.6 2.1 7.3E-05 38.2 10.2 76 158-239 31-106 (253)
37 2vp8_A Dihydropteroate synthas 89.2 1.6 5.6E-05 42.1 9.5 140 156-302 61-239 (318)
38 2dqw_A Dihydropteroate synthas 89.2 5.1 0.00018 38.1 12.9 139 156-303 48-220 (294)
39 1wbh_A KHG/KDPG aldolase; lyas 89.0 12 0.0004 33.7 14.7 112 157-310 25-136 (214)
40 1vhc_A Putative KHG/KDPG aldol 88.0 13 0.00045 33.6 14.4 113 157-311 26-138 (224)
41 3nav_A Tryptophan synthase alp 87.9 3.2 0.00011 39.1 10.5 110 195-309 7-131 (271)
42 3no5_A Uncharacterized protein 87.8 4.7 0.00016 38.0 11.5 81 156-237 26-107 (275)
43 1mxs_A KDPG aldolase; 2-keto-3 87.7 16 0.00054 33.1 14.8 112 157-310 35-146 (225)
44 3lot_A Uncharacterized protein 87.3 2.1 7.2E-05 41.2 8.9 139 156-304 28-192 (314)
45 3inp_A D-ribulose-phosphate 3- 87.2 3.2 0.00011 38.5 9.9 153 157-342 37-193 (246)
46 2y88_A Phosphoribosyl isomeras 86.5 1.4 4.9E-05 39.7 7.0 75 160-241 31-105 (244)
47 3fst_A 5,10-methylenetetrahydr 86.4 4.2 0.00014 38.9 10.5 99 157-269 94-200 (304)
48 1h1y_A D-ribulose-5-phosphate 86.0 6.8 0.00023 35.2 11.3 132 157-316 16-150 (228)
49 3apt_A Methylenetetrahydrofola 85.9 1.7 5.9E-05 41.6 7.5 100 157-269 83-197 (310)
50 3bg3_A Pyruvate carboxylase, m 85.0 12 0.00041 39.9 14.1 136 156-310 121-281 (718)
51 3tr9_A Dihydropteroate synthas 84.7 17 0.00057 34.9 13.8 138 157-302 46-224 (314)
52 4avf_A Inosine-5'-monophosphat 84.6 21 0.0007 36.1 15.2 134 160-313 228-364 (490)
53 4fxs_A Inosine-5'-monophosphat 84.4 9.9 0.00034 38.6 12.8 131 160-313 230-366 (496)
54 1yxy_A Putative N-acetylmannos 84.2 14 0.00048 32.9 12.5 122 157-312 31-164 (234)
55 4af0_A Inosine-5'-monophosphat 83.9 3.3 0.00011 42.8 8.9 135 160-313 280-416 (556)
56 3e96_A Dihydrodipicolinate syn 83.8 11 0.00037 35.9 12.1 120 202-342 8-137 (316)
57 2y5s_A DHPS, dihydropteroate s 83.7 6.5 0.00022 37.4 10.4 139 156-303 42-217 (294)
58 2wje_A CPS4B, tyrosine-protein 83.7 13 0.00043 33.7 12.1 48 156-203 20-67 (247)
59 1tx2_A DHPS, dihydropteroate s 83.4 11 0.00037 35.9 11.7 139 157-303 60-227 (297)
60 1vzw_A Phosphoribosyl isomeras 82.9 1.3 4.4E-05 40.1 4.9 75 161-242 33-107 (244)
61 1vc4_A Indole-3-glycerol phosp 82.3 20 0.0007 32.9 13.0 119 160-312 65-183 (254)
62 1qop_A Tryptophan synthase alp 82.2 6.1 0.00021 36.6 9.4 80 157-236 28-126 (268)
63 3hq1_A 2-isopropylmalate synth 82.1 22 0.00075 37.4 14.5 142 156-309 89-251 (644)
64 3c6c_A 3-keto-5-aminohexanoate 81.1 3.6 0.00012 39.6 7.5 88 129-216 14-105 (316)
65 3e49_A Uncharacterized protein 81.1 14 0.00047 35.5 11.6 83 156-239 28-113 (311)
66 3usb_A Inosine-5'-monophosphat 80.6 18 0.00063 36.7 13.1 132 160-313 255-391 (511)
67 3hbl_A Pyruvate carboxylase; T 80.4 11 0.00039 42.2 12.3 79 157-239 552-647 (1150)
68 3e02_A Uncharacterized protein 79.7 14 0.00049 35.3 11.3 83 156-239 28-113 (311)
69 1jvn_A Glutamine, bifunctional 79.4 7.4 0.00025 40.1 9.7 101 141-243 261-371 (555)
70 1y0e_A Putative N-acetylmannos 78.5 34 0.0012 30.0 15.9 154 157-349 20-182 (223)
71 2ekc_A AQ_1548, tryptophan syn 78.3 41 0.0014 30.8 14.0 48 223-271 35-92 (262)
72 4fo4_A Inosine 5'-monophosphat 78.3 36 0.0012 33.2 13.8 132 162-313 109-243 (366)
73 1mzh_A Deoxyribose-phosphate a 77.6 38 0.0013 30.3 13.0 127 157-310 17-152 (225)
74 1tqj_A Ribulose-phosphate 3-ep 77.5 17 0.00058 32.8 10.6 153 157-342 14-171 (230)
75 3gr7_A NADPH dehydrogenase; fl 77.2 7.4 0.00025 37.5 8.5 81 156-239 225-307 (340)
76 3na8_A Putative dihydrodipicol 76.6 10 0.00036 36.0 9.3 97 202-309 21-125 (315)
77 4gj1_A 1-(5-phosphoribosyl)-5- 76.4 14 0.0005 33.6 9.9 91 160-264 151-241 (243)
78 1xi3_A Thiamine phosphate pyro 75.4 12 0.00043 32.4 8.9 65 161-237 27-91 (215)
79 2vef_A Dihydropteroate synthas 75.1 30 0.001 33.1 12.0 77 156-237 29-110 (314)
80 3noy_A 4-hydroxy-3-methylbut-2 75.1 48 0.0017 32.4 13.5 126 157-309 43-182 (366)
81 2wqp_A Polysialic acid capsule 74.9 11 0.00039 36.7 9.1 107 158-270 33-173 (349)
82 2e6f_A Dihydroorotate dehydrog 74.7 14 0.00048 34.6 9.6 84 222-311 109-196 (314)
83 3qja_A IGPS, indole-3-glycerol 74.6 45 0.0015 31.0 12.9 120 159-311 71-190 (272)
84 2ekc_A AQ_1548, tryptophan syn 74.6 52 0.0018 30.1 13.8 79 157-236 28-126 (262)
85 3r2g_A Inosine 5'-monophosphat 74.6 66 0.0022 31.3 14.9 132 159-313 98-231 (361)
86 3tsm_A IGPS, indole-3-glycerol 74.4 56 0.0019 30.4 13.6 119 159-310 78-196 (272)
87 2ftp_A Hydroxymethylglutaryl-C 74.3 11 0.00038 35.5 8.7 81 156-240 155-236 (302)
88 3k13_A 5-methyltetrahydrofolat 73.8 62 0.0021 30.6 15.4 74 157-238 34-112 (300)
89 1hjs_A Beta-1,4-galactanase; 4 73.1 54 0.0018 31.2 13.4 138 167-312 34-214 (332)
90 1z41_A YQJM, probable NADH-dep 73.0 8 0.00027 37.0 7.5 80 156-239 225-307 (338)
91 3mcm_A 2-amino-4-hydroxy-6-hyd 72.8 15 0.00052 36.9 9.6 75 157-235 209-294 (442)
92 4eiv_A Deoxyribose-phosphate a 72.6 18 0.00061 34.5 9.5 151 143-308 87-263 (297)
93 3dz1_A Dihydrodipicolinate syn 72.0 20 0.00069 33.9 10.0 100 222-342 32-132 (313)
94 1vli_A Spore coat polysacchari 71.9 11 0.00037 37.3 8.2 106 158-269 42-182 (385)
95 4djd_D C/Fe-SP, corrinoid/iron 71.8 64 0.0022 30.9 13.5 135 159-301 79-236 (323)
96 1f6y_A 5-methyltetrahydrofolat 71.7 44 0.0015 30.8 12.1 73 157-237 22-96 (262)
97 3ble_A Citramalate synthase fr 71.5 9.8 0.00034 36.6 7.7 99 157-267 166-268 (337)
98 1geq_A Tryptophan synthase alp 71.0 52 0.0018 29.2 12.2 79 159-239 18-115 (248)
99 2cw6_A Hydroxymethylglutaryl-C 70.6 17 0.0006 34.0 9.1 77 157-238 153-231 (298)
100 2yw3_A 4-hydroxy-2-oxoglutarat 70.6 54 0.0018 29.0 12.0 110 157-310 22-131 (207)
101 3tdn_A FLR symmetric alpha-bet 70.1 15 0.0005 33.1 8.2 74 160-239 35-108 (247)
102 3qze_A DHDPS, dihydrodipicolin 70.0 21 0.0007 34.0 9.6 94 206-310 24-125 (314)
103 2qf7_A Pyruvate carboxylase pr 70.0 24 0.00082 39.7 11.4 136 156-310 569-729 (1165)
104 1jcn_A Inosine monophosphate d 69.7 58 0.002 32.7 13.4 131 160-313 254-390 (514)
105 3cpr_A Dihydrodipicolinate syn 69.6 36 0.0012 32.0 11.2 114 208-342 19-142 (304)
106 3f4w_A Putative hexulose 6 pho 69.3 38 0.0013 29.3 10.6 122 165-313 69-190 (211)
107 2r91_A 2-keto-3-deoxy-(6-phosp 69.0 54 0.0019 30.4 12.1 100 222-343 22-123 (286)
108 1w3i_A EDA, 2-keto-3-deoxy glu 68.4 27 0.00092 32.7 9.9 99 222-343 23-124 (293)
109 1f76_A Dihydroorotate dehydrog 67.9 17 0.00058 34.4 8.5 81 157-239 222-318 (336)
110 1xky_A Dihydrodipicolinate syn 67.6 30 0.001 32.5 10.1 92 207-309 14-113 (301)
111 1thf_D HISF protein; thermophI 67.6 18 0.0006 32.5 8.2 74 160-239 30-103 (253)
112 3lmz_A Putative sugar isomeras 67.4 56 0.0019 28.9 11.5 97 222-345 33-129 (257)
113 3d0c_A Dihydrodipicolinate syn 67.1 47 0.0016 31.4 11.4 115 207-342 13-137 (314)
114 3h5d_A DHDPS, dihydrodipicolin 67.0 60 0.002 30.6 12.1 93 206-309 8-109 (311)
115 3nl6_A Thiamine biosynthetic b 67.0 38 0.0013 34.7 11.4 111 159-313 24-141 (540)
116 1ep3_A Dihydroorotate dehydrog 66.3 37 0.0013 31.3 10.4 143 158-312 109-272 (311)
117 1ka9_F Imidazole glycerol phos 66.2 11 0.00038 33.8 6.5 75 159-239 30-104 (252)
118 1pii_A N-(5'phosphoribosyl)ant 66.1 27 0.00092 35.1 9.8 142 168-335 125-300 (452)
119 3flu_A DHDPS, dihydrodipicolin 65.9 47 0.0016 31.0 11.1 100 222-342 31-133 (297)
120 3tak_A DHDPS, dihydrodipicolin 65.7 25 0.00086 32.8 9.1 78 222-310 25-103 (291)
121 3si9_A DHDPS, dihydrodipicolin 65.5 29 0.00098 33.0 9.5 77 222-309 46-123 (315)
122 1jub_A Dihydroorotate dehydrog 65.5 24 0.00083 32.9 9.0 118 188-311 72-193 (311)
123 2nuw_A 2-keto-3-deoxygluconate 65.4 57 0.0019 30.3 11.5 98 222-342 23-123 (288)
124 1zco_A 2-dehydro-3-deoxyphosph 65.4 21 0.00072 33.1 8.4 68 279-348 24-93 (262)
125 2wkj_A N-acetylneuraminate lya 65.3 29 0.001 32.6 9.5 115 207-342 13-137 (303)
126 3obk_A Delta-aminolevulinic ac 65.3 10 0.00034 36.9 6.1 57 156-212 69-132 (356)
127 3daq_A DHDPS, dihydrodipicolin 64.7 51 0.0017 30.7 11.0 100 222-342 26-128 (292)
128 3hgj_A Chromate reductase; TIM 64.4 44 0.0015 32.0 10.8 51 260-310 205-259 (349)
129 3qfe_A Putative dihydrodipicol 64.3 43 0.0015 31.8 10.5 77 222-309 35-112 (318)
130 1vhn_A Putative flavin oxidore 63.4 8.7 0.0003 36.4 5.4 76 157-239 137-213 (318)
131 3tha_A Tryptophan synthase alp 63.3 1.2 4.2E-05 41.5 -0.6 17 253-269 71-87 (252)
132 3l21_A DHDPS, dihydrodipicolin 63.2 31 0.0011 32.5 9.3 92 208-310 18-117 (304)
133 2bmb_A Folic acid synthesis pr 63.0 1E+02 0.0036 31.7 13.7 76 158-237 247-336 (545)
134 3b0p_A TRNA-dihydrouridine syn 62.9 20 0.0007 34.4 8.1 78 158-239 142-225 (350)
135 2h9a_B CO dehydrogenase/acetyl 62.8 1.1E+02 0.0036 29.2 12.9 72 160-234 74-149 (310)
136 3eb2_A Putative dihydrodipicol 62.5 42 0.0014 31.5 10.0 77 222-309 28-105 (300)
137 1vrd_A Inosine-5'-monophosphat 62.5 1.2E+02 0.004 30.2 14.0 132 160-312 236-371 (494)
138 1jw9_B Molybdopterin biosynthe 62.2 65 0.0022 29.1 11.0 71 163-236 44-125 (249)
139 1qop_A Tryptophan synthase alp 62.2 52 0.0018 30.1 10.5 48 222-270 34-91 (268)
140 1ydn_A Hydroxymethylglutaryl-C 62.2 23 0.00078 33.0 8.1 128 157-302 152-281 (295)
141 2ehh_A DHDPS, dihydrodipicolin 62.1 61 0.0021 30.2 11.1 77 222-309 24-101 (294)
142 2yxg_A DHDPS, dihydrodipicolin 61.9 60 0.002 30.2 10.9 77 222-309 24-101 (289)
143 1w5q_A Delta-aminolevulinic ac 61.8 10 0.00034 36.7 5.4 57 156-212 62-125 (337)
144 3ovp_A Ribulose-phosphate 3-ep 61.7 10 0.00036 34.4 5.4 81 156-243 13-98 (228)
145 3q58_A N-acetylmannosamine-6-p 61.5 92 0.0031 28.0 13.6 115 157-309 33-155 (229)
146 3l5l_A Xenobiotic reductase A; 61.2 13 0.00046 35.9 6.4 79 157-239 243-325 (363)
147 4fo4_A Inosine 5'-monophosphat 61.1 1.2E+02 0.0042 29.3 15.2 120 164-316 61-181 (366)
148 3b4u_A Dihydrodipicolinate syn 61.0 62 0.0021 30.2 10.9 99 222-341 27-129 (294)
149 3m5v_A DHDPS, dihydrodipicolin 60.9 53 0.0018 30.8 10.4 79 222-310 31-110 (301)
150 1f6k_A N-acetylneuraminate lya 60.8 69 0.0024 29.8 11.2 100 222-342 27-130 (293)
151 1nvm_A HOA, 4-hydroxy-2-oxoval 60.6 23 0.00078 34.0 7.9 100 157-265 146-247 (345)
152 3o63_A Probable thiamine-phosp 60.3 1E+02 0.0034 28.1 13.7 115 160-313 43-165 (243)
153 3gr7_A NADPH dehydrogenase; fl 60.3 14 0.00048 35.5 6.3 87 224-310 149-249 (340)
154 2vc6_A MOSA, dihydrodipicolina 60.1 70 0.0024 29.7 11.1 77 222-309 24-101 (292)
155 2cc0_A Acetyl-xylan esterase; 59.9 83 0.0028 27.0 11.4 132 164-313 47-186 (195)
156 3nvt_A 3-deoxy-D-arabino-heptu 59.9 25 0.00085 34.6 8.1 121 158-305 154-278 (385)
157 3hgj_A Chromate reductase; TIM 59.7 22 0.00074 34.2 7.6 80 156-239 235-318 (349)
158 1h7n_A 5-aminolaevulinic acid 59.5 19 0.00065 34.9 6.9 57 156-212 65-129 (342)
159 2rfg_A Dihydrodipicolinate syn 59.3 64 0.0022 30.2 10.6 100 222-342 24-126 (297)
160 3l5l_A Xenobiotic reductase A; 59.2 34 0.0012 33.0 8.9 52 260-311 211-267 (363)
161 2a4a_A Deoxyribose-phosphate a 59.0 75 0.0026 29.9 11.0 149 143-308 93-257 (281)
162 3sr7_A Isopentenyl-diphosphate 59.0 21 0.00073 34.8 7.4 134 159-311 101-238 (365)
163 1rpx_A Protein (ribulose-phosp 58.9 29 0.00099 30.7 7.8 78 157-241 20-100 (230)
164 1gte_A Dihydropyrimidine dehyd 58.5 95 0.0033 34.1 13.3 171 158-346 646-846 (1025)
165 3fkr_A L-2-keto-3-deoxyarabona 57.9 75 0.0026 29.9 10.9 77 222-309 32-109 (309)
166 3s5o_A 4-hydroxy-2-oxoglutarat 57.8 53 0.0018 30.9 9.8 76 223-309 39-115 (307)
167 2w6r_A Imidazole glycerol phos 57.5 17 0.00057 32.9 6.1 75 159-239 29-103 (266)
168 2r8w_A AGR_C_1641P; APC7498, d 57.4 61 0.0021 30.9 10.3 77 222-309 58-135 (332)
169 2xwp_A Sirohydrochlorin cobalt 57.0 62 0.0021 29.5 9.9 137 162-313 62-201 (264)
170 3igs_A N-acetylmannosamine-6-p 57.0 1.1E+02 0.0038 27.5 14.1 115 157-309 33-155 (232)
171 3khj_A Inosine-5-monophosphate 57.0 1.4E+02 0.0048 28.7 13.7 127 163-313 107-239 (361)
172 2l82_A Designed protein OR32; 56.8 80 0.0027 25.8 10.9 77 158-236 11-107 (162)
173 2v9d_A YAGE; dihydrodipicolini 56.8 70 0.0024 30.7 10.6 77 222-309 55-132 (343)
174 1ydo_A HMG-COA lyase; TIM-barr 56.6 21 0.0007 33.9 6.7 77 157-238 154-232 (307)
175 1l6s_A Porphobilinogen synthas 56.4 19 0.00064 34.6 6.2 55 156-212 54-115 (323)
176 1pv8_A Delta-aminolevulinic ac 55.7 16 0.00056 35.1 5.7 57 156-212 55-118 (330)
177 1tv5_A Dhodehase, dihydroorota 55.6 48 0.0016 33.2 9.5 81 157-239 308-402 (443)
178 1o5k_A DHDPS, dihydrodipicolin 54.9 85 0.0029 29.4 10.7 92 207-309 15-113 (306)
179 1rqb_A Transcarboxylase 5S sub 54.7 36 0.0012 35.0 8.6 77 158-238 173-251 (539)
180 1vp8_A Hypothetical protein AF 54.7 49 0.0017 29.7 8.3 98 154-265 23-133 (201)
181 2b7n_A Probable nicotinate-nuc 54.6 32 0.0011 32.0 7.5 63 166-239 195-257 (273)
182 1yad_A Regulatory protein TENI 54.6 1.1E+02 0.0037 26.7 13.6 69 157-239 27-95 (221)
183 1thf_D HISF protein; thermophI 54.4 39 0.0013 30.1 8.0 90 161-264 152-241 (253)
184 2jbm_A Nicotinate-nucleotide p 54.4 31 0.0011 32.6 7.6 63 166-239 210-272 (299)
185 1m5w_A Pyridoxal phosphate bio 54.1 43 0.0015 30.9 8.1 135 159-313 76-218 (243)
186 2nx9_A Oxaloacetate decarboxyl 53.7 42 0.0014 33.8 8.7 76 158-238 156-232 (464)
187 1zfj_A Inosine monophosphate d 53.6 1.6E+02 0.0055 29.1 13.2 130 161-313 233-368 (491)
188 1jvn_A Glutamine, bifunctional 53.6 61 0.0021 33.2 10.1 90 161-264 453-543 (555)
189 2y88_A Phosphoribosyl isomeras 53.5 33 0.0011 30.4 7.3 73 161-239 150-225 (244)
190 4dpp_A DHDPS 2, dihydrodipicol 53.3 36 0.0012 33.2 7.9 96 207-313 61-165 (360)
191 3ewb_X 2-isopropylmalate synth 53.1 71 0.0024 29.9 9.8 125 157-301 147-276 (293)
192 3a5f_A Dihydrodipicolinate syn 53.0 53 0.0018 30.5 8.9 83 223-316 26-111 (291)
193 3ngj_A Deoxyribose-phosphate a 52.6 1.4E+02 0.0048 27.3 12.5 167 157-355 40-212 (239)
194 1tqx_A D-ribulose-5-phosphate 52.5 16 0.00056 33.1 5.0 96 158-266 122-219 (227)
195 2f6u_A GGGPS, (S)-3-O-geranylg 52.4 24 0.00083 32.3 6.2 126 209-348 10-171 (234)
196 3hdg_A Uncharacterized protein 52.3 74 0.0025 24.4 8.5 58 196-269 67-124 (137)
197 3khj_A Inosine-5-monophosphate 51.8 1.7E+02 0.0058 28.1 14.6 117 164-316 60-177 (361)
198 1qpo_A Quinolinate acid phosph 51.8 38 0.0013 31.8 7.6 65 164-239 205-269 (284)
199 4gj1_A 1-(5-phosphoribosyl)-5- 51.6 24 0.00082 32.1 6.1 75 159-239 30-104 (243)
200 3l5a_A NADH/flavin oxidoreduct 51.3 56 0.0019 32.3 9.2 147 155-313 158-349 (419)
201 1vzw_A Phosphoribosyl isomeras 50.6 21 0.00071 31.9 5.4 73 161-239 147-222 (244)
202 1w1z_A Delta-aminolevulinic ac 50.6 20 0.00069 34.5 5.4 54 157-212 61-121 (328)
203 3oa3_A Aldolase; structural ge 50.6 1.7E+02 0.0057 27.6 13.7 168 157-355 71-246 (288)
204 2isw_A Putative fructose-1,6-b 50.0 94 0.0032 29.8 10.1 171 157-347 26-209 (323)
205 4hb7_A Dihydropteroate synthas 49.5 1.2E+02 0.0043 28.2 10.7 138 156-302 26-192 (270)
206 2w6r_A Imidazole glycerol phos 49.4 52 0.0018 29.6 8.0 73 161-239 157-229 (266)
207 1zud_1 Adenylyltransferase THI 49.3 1.5E+02 0.0051 26.7 11.7 70 164-236 42-122 (251)
208 1vrd_A Inosine-5'-monophosphat 49.0 49 0.0017 33.0 8.4 123 164-310 178-306 (494)
209 1ur4_A Galactanase; hydrolase, 48.6 1.8E+02 0.0062 28.4 12.3 55 255-312 174-234 (399)
210 1wa3_A 2-keto-3-deoxy-6-phosph 48.1 35 0.0012 29.5 6.4 112 157-310 19-131 (205)
211 2ojp_A DHDPS, dihydrodipicolin 47.9 78 0.0027 29.4 9.2 77 222-309 25-102 (292)
212 3eeg_A 2-isopropylmalate synth 47.8 38 0.0013 32.3 7.1 125 157-301 148-277 (325)
213 3n9r_A Fructose-bisphosphate a 47.8 1.4E+02 0.0047 28.4 10.8 136 158-309 26-174 (307)
214 1h5y_A HISF; histidine biosynt 47.6 49 0.0017 29.0 7.4 74 160-239 154-227 (253)
215 3s1x_A Probable transaldolase; 47.6 60 0.002 29.5 7.9 77 168-251 120-196 (223)
216 3ctl_A D-allulose-6-phosphate 47.3 44 0.0015 30.2 7.1 151 157-342 10-165 (231)
217 2gou_A Oxidoreductase, FMN-bin 47.2 59 0.002 31.4 8.4 75 157-239 247-322 (365)
218 2fli_A Ribulose-phosphate 3-ep 46.5 81 0.0028 27.3 8.6 78 157-241 13-93 (220)
219 1vs1_A 3-deoxy-7-phosphoheptul 46.0 63 0.0022 30.1 8.1 68 279-348 39-108 (276)
220 3cu2_A Ribulose-5-phosphate 3- 45.9 18 0.0006 33.1 4.2 79 157-243 23-103 (237)
221 3jte_A Response regulator rece 45.8 1E+02 0.0035 23.8 9.2 39 196-236 65-103 (143)
222 3p6l_A Sugar phosphate isomera 45.3 1.5E+02 0.0051 26.0 10.4 120 208-346 9-132 (262)
223 1mzh_A Deoxyribose-phosphate a 45.3 52 0.0018 29.4 7.2 74 157-238 129-203 (225)
224 3rmj_A 2-isopropylmalate synth 45.3 83 0.0029 30.5 9.2 100 157-266 154-258 (370)
225 3zwt_A Dihydroorotate dehydrog 45.1 76 0.0026 30.7 8.9 81 157-239 231-327 (367)
226 1rvg_A Fructose-1,6-bisphospha 44.9 1.5E+02 0.0052 28.1 10.7 168 157-347 25-207 (305)
227 3bg3_A Pyruvate carboxylase, m 44.9 60 0.0021 34.5 8.6 78 157-238 258-336 (718)
228 3g8r_A Probable spore coat pol 44.6 82 0.0028 30.6 8.9 106 158-269 19-159 (350)
229 3dcp_A Histidinol-phosphatase; 44.3 54 0.0019 30.4 7.4 171 162-346 20-254 (283)
230 3q94_A Fructose-bisphosphate a 44.3 1.7E+02 0.0057 27.5 10.8 169 158-346 30-210 (288)
231 1o4u_A Type II quinolic acid p 44.2 29 0.00098 32.8 5.5 65 164-239 204-268 (285)
232 3b0p_A TRNA-dihydrouridine syn 44.1 1.6E+02 0.0055 28.0 11.0 87 222-310 73-164 (350)
233 3rr1_A GALD, putative D-galact 44.1 50 0.0017 32.3 7.5 56 157-212 124-182 (405)
234 3qz6_A HPCH/HPAI aldolase; str 44.1 1.6E+02 0.0054 26.9 10.5 123 166-310 30-174 (261)
235 2ovl_A Putative racemase; stru 43.9 84 0.0029 30.0 9.0 149 157-349 145-300 (371)
236 1rd5_A Tryptophan synthase alp 43.8 1.8E+02 0.0061 26.1 12.1 76 159-238 31-124 (262)
237 3mz2_A Glycerophosphoryl diest 43.6 2E+02 0.0069 26.6 12.0 118 163-309 145-265 (292)
238 1ka9_F Imidazole glycerol phos 43.6 66 0.0022 28.5 7.7 91 161-265 153-243 (252)
239 2tps_A Protein (thiamin phosph 43.4 58 0.002 28.4 7.2 65 162-238 33-100 (227)
240 2pgw_A Muconate cycloisomerase 43.4 80 0.0027 30.3 8.7 49 157-212 146-194 (384)
241 2r14_A Morphinone reductase; H 43.4 35 0.0012 33.2 6.2 76 157-239 252-328 (377)
242 3ajx_A 3-hexulose-6-phosphate 43.3 1E+02 0.0034 26.4 8.7 72 157-238 10-83 (207)
243 1twd_A Copper homeostasis prot 43.2 29 0.001 32.3 5.2 70 161-239 129-198 (256)
244 3eul_A Possible nitrate/nitrit 42.8 1.2E+02 0.0041 23.7 9.1 58 196-269 77-134 (152)
245 1qo2_A Molecule: N-((5-phospho 42.7 28 0.00097 31.0 5.0 74 159-239 29-102 (241)
246 1q7z_A 5-methyltetrahydrofolat 42.6 2.9E+02 0.01 28.2 14.0 137 157-304 337-500 (566)
247 3l5a_A NADH/flavin oxidoreduct 42.6 14 0.00048 36.7 3.1 80 157-239 261-346 (419)
248 3i65_A Dihydroorotate dehydrog 42.2 74 0.0025 31.6 8.3 81 157-239 280-374 (415)
249 3tva_A Xylose isomerase domain 42.1 51 0.0018 29.6 6.8 141 159-309 101-258 (290)
250 1gvf_A Tagatose-bisphosphate a 42.1 1.3E+02 0.0044 28.2 9.6 168 157-346 26-206 (286)
251 1vr6_A Phospho-2-dehydro-3-deo 42.1 81 0.0028 30.6 8.4 69 278-348 106-176 (350)
252 1ny1_A Probable polysaccharide 41.8 80 0.0028 28.2 8.0 136 164-313 86-230 (240)
253 2pz0_A Glycerophosphoryl diest 41.7 1.1E+02 0.0039 27.3 9.1 105 164-309 133-238 (252)
254 3b2n_A Uncharacterized protein 41.4 1.2E+02 0.004 23.2 8.5 58 196-269 65-122 (133)
255 3nav_A Tryptophan synthase alp 41.2 1.4E+02 0.0049 27.6 9.7 123 163-312 115-239 (271)
256 3ffs_A Inosine-5-monophosphate 41.2 54 0.0018 32.4 7.1 130 163-313 146-278 (400)
257 4d9a_A 2-pyrone-4,6-dicarbaxyl 41.1 2.2E+02 0.0074 26.2 12.3 172 162-368 56-237 (303)
258 2agk_A 1-(5-phosphoribosyl)-5- 40.9 61 0.0021 29.7 7.1 162 159-349 37-212 (260)
259 3q45_A Mandelate racemase/muco 40.8 2.1E+02 0.0071 27.2 11.2 146 157-347 139-291 (368)
260 1ps9_A 2,4-dienoyl-COA reducta 40.6 46 0.0016 34.5 6.9 81 156-239 224-310 (671)
261 2bdq_A Copper homeostasis prot 40.1 1.5E+02 0.005 27.0 9.3 132 157-313 70-210 (224)
262 3r8r_A Transaldolase; pentose 40.0 36 0.0012 30.7 5.2 77 168-251 118-194 (212)
263 1zco_A 2-dehydro-3-deoxyphosph 39.7 1E+02 0.0036 28.3 8.5 105 158-269 35-155 (262)
264 1vyr_A Pentaerythritol tetrani 39.6 1E+02 0.0034 29.7 8.7 75 157-239 248-323 (364)
265 3nvt_A 3-deoxy-D-arabino-heptu 39.4 90 0.0031 30.6 8.4 67 280-348 144-212 (385)
266 2q5c_A NTRC family transcripti 39.4 34 0.0012 30.1 4.9 91 194-292 15-109 (196)
267 3ozy_A Putative mandelate race 39.3 2E+02 0.0068 27.6 10.9 146 157-347 150-303 (389)
268 4djd_C C/Fe-SP, corrinoid/iron 39.1 2E+02 0.0069 28.8 10.9 68 157-235 102-178 (446)
269 1f76_A Dihydroorotate dehydrog 38.9 1.6E+02 0.0056 27.4 10.0 97 257-358 187-304 (336)
270 1vr6_A Phospho-2-dehydro-3-deo 38.8 1.3E+02 0.0045 29.1 9.3 75 158-239 118-196 (350)
271 3hzh_A Chemotaxis response reg 38.8 1.1E+02 0.0038 24.3 7.7 39 196-236 99-137 (157)
272 2iw0_A Chitin deacetylase; hyd 38.7 1.3E+02 0.0044 27.1 8.9 141 164-313 89-238 (254)
273 2e6f_A Dihydroorotate dehydrog 38.6 78 0.0027 29.3 7.6 81 157-239 171-273 (314)
274 3usb_A Inosine-5'-monophosphat 38.5 2.9E+02 0.0098 27.8 12.3 126 161-310 194-325 (511)
275 1twd_A Copper homeostasis prot 38.2 1.5E+02 0.0053 27.4 9.3 71 164-239 12-93 (256)
276 4ef8_A Dihydroorotate dehydrog 38.2 1.2E+02 0.0042 29.2 9.0 116 188-310 107-228 (354)
277 1vs1_A 3-deoxy-7-phosphoheptul 38.2 1.1E+02 0.0037 28.6 8.4 75 158-239 50-128 (276)
278 2o55_A Putative glycerophospho 38.0 1.3E+02 0.0044 26.9 8.8 112 163-309 129-243 (258)
279 2agk_A 1-(5-phosphoribosyl)-5- 37.9 59 0.002 29.8 6.5 69 162-236 159-233 (260)
280 2yr1_A 3-dehydroquinate dehydr 37.9 2.4E+02 0.008 25.7 14.8 46 157-206 29-76 (257)
281 3f4w_A Putative hexulose 6 pho 37.6 1.9E+02 0.0066 24.6 9.9 74 159-239 113-187 (211)
282 3paj_A Nicotinate-nucleotide p 37.5 1E+02 0.0035 29.5 8.2 62 164-239 242-303 (320)
283 1ps9_A 2,4-dienoyl-COA reducta 37.4 3.5E+02 0.012 27.7 17.9 87 224-310 146-248 (671)
284 2rdx_A Mandelate racemase/muco 37.4 2.7E+02 0.0094 26.4 12.5 147 158-348 145-294 (379)
285 2vyo_A ECU11_0510, chitooligos 37.2 2.1E+02 0.0072 25.6 10.1 135 165-315 72-219 (254)
286 4dad_A Putative pilus assembly 37.1 1.2E+02 0.004 23.6 7.5 58 196-269 83-140 (146)
287 2r14_A Morphinone reductase; H 36.6 77 0.0026 30.7 7.4 88 224-311 171-276 (377)
288 3ngj_A Deoxyribose-phosphate a 36.5 54 0.0018 30.1 5.9 142 143-309 82-228 (239)
289 3cqj_A L-ribulose-5-phosphate 36.2 1.1E+02 0.0039 27.3 8.1 140 159-309 107-261 (295)
290 3vnd_A TSA, tryptophan synthas 35.9 2.6E+02 0.0089 25.7 12.1 140 157-302 29-204 (267)
291 1mdl_A Mandelate racemase; iso 35.2 84 0.0029 29.7 7.3 148 158-349 144-298 (359)
292 1qpo_A Quinolinate acid phosph 35.2 2.7E+02 0.0092 25.9 10.7 91 195-312 181-271 (284)
293 3otr_A Enolase; structural gen 35.0 89 0.0031 31.4 7.6 137 192-350 283-438 (452)
294 1s2w_A Phosphoenolpyruvate pho 34.8 2.9E+02 0.0098 25.8 11.6 127 159-310 93-238 (295)
295 1n7k_A Deoxyribose-phosphate a 34.6 2.6E+02 0.0089 25.3 11.9 128 157-310 33-168 (234)
296 1fob_A Beta-1,4-galactanase; B 34.4 2.9E+02 0.01 25.8 13.6 136 167-312 34-215 (334)
297 3gka_A N-ethylmaleimide reduct 34.2 1E+02 0.0035 29.8 7.8 87 224-310 166-270 (361)
298 2j13_A Polysaccharide deacetyl 34.2 87 0.003 28.2 7.0 137 164-314 98-243 (247)
299 3tqv_A Nicotinate-nucleotide p 34.2 97 0.0033 29.2 7.3 62 164-239 209-270 (287)
300 4i6k_A Amidohydrolase family p 34.2 2.6E+02 0.009 25.2 13.7 121 160-305 53-175 (294)
301 1gte_A Dihydropyrimidine dehyd 34.1 98 0.0034 34.0 8.5 111 190-310 616-735 (1025)
302 1yxy_A Putative N-acetylmannos 34.0 1.2E+02 0.0042 26.5 7.8 124 162-312 90-217 (234)
303 3ktc_A Xylose isomerase; putat 34.0 1.1E+02 0.0038 28.3 7.9 141 160-309 107-270 (333)
304 3qvq_A Phosphodiesterase OLEI0 33.5 2.6E+02 0.0088 24.9 11.6 103 166-309 133-237 (252)
305 4e7p_A Response regulator; DNA 33.2 1.7E+02 0.0059 22.8 9.7 58 196-269 82-139 (150)
306 1p0k_A Isopentenyl-diphosphate 33.0 3.1E+02 0.011 25.7 11.3 131 164-310 77-209 (349)
307 2vws_A YFAU, 2-keto-3-deoxy su 32.9 2.8E+02 0.0097 25.2 10.6 73 165-245 31-104 (267)
308 2ze3_A DFA0005; organic waste 32.8 1.3E+02 0.0045 27.9 8.0 85 221-309 25-111 (275)
309 1qtw_A Endonuclease IV; DNA re 32.7 2.5E+02 0.0086 24.6 11.8 108 159-268 88-204 (285)
310 4hjf_A Ggdef family protein; s 32.4 91 0.0031 29.5 7.0 146 158-336 177-326 (340)
311 3kto_A Response regulator rece 32.3 1.4E+02 0.0049 22.8 7.2 39 196-236 68-106 (136)
312 2v82_A 2-dehydro-3-deoxy-6-pho 32.2 1E+02 0.0034 26.6 6.8 69 157-237 16-85 (212)
313 1jub_A Dihydroorotate dehydrog 31.8 1.8E+02 0.0063 26.7 9.0 169 158-346 104-301 (311)
314 3o1n_A 3-dehydroquinate dehydr 31.8 3.1E+02 0.011 25.3 15.7 134 157-310 49-196 (276)
315 1tzz_A Hypothetical protein L1 31.8 3.4E+02 0.012 25.8 11.6 148 157-348 164-325 (392)
316 1t57_A Conserved protein MTH16 31.6 90 0.0031 28.0 6.2 107 154-278 31-149 (206)
317 2bdq_A Copper homeostasis prot 31.6 74 0.0025 29.0 5.8 71 160-238 133-206 (224)
318 3toy_A Mandelate racemase/muco 31.6 1.9E+02 0.0063 27.9 9.2 149 157-349 166-322 (383)
319 3gnn_A Nicotinate-nucleotide p 31.4 1.2E+02 0.0042 28.6 7.6 61 165-239 221-281 (298)
320 1ccw_A Protein (glutamate muta 31.3 1.9E+02 0.0064 23.5 8.0 72 157-238 41-118 (137)
321 3i4k_A Muconate lactonizing en 31.3 2.5E+02 0.0086 26.8 10.1 145 158-346 148-300 (383)
322 1tv5_A Dhodehase, dihydroorota 31.1 4E+02 0.014 26.4 12.2 117 214-346 304-432 (443)
323 2nx2_A Hypothetical protein YP 30.8 25 0.00086 30.7 2.5 45 165-216 35-80 (181)
324 2qxy_A Response regulator; reg 30.7 1.8E+02 0.0061 22.2 7.6 39 196-236 63-101 (142)
325 4dwd_A Mandelate racemase/muco 30.6 3.2E+02 0.011 26.3 10.8 151 158-347 139-297 (393)
326 1ep3_A Dihydroorotate dehydrog 30.6 99 0.0034 28.3 6.8 78 159-239 175-270 (311)
327 3paj_A Nicotinate-nucleotide p 30.3 2.5E+02 0.0084 26.8 9.6 88 195-312 218-305 (320)
328 3gka_A N-ethylmaleimide reduct 30.0 83 0.0028 30.4 6.3 67 159-239 249-316 (361)
329 3oix_A Putative dihydroorotate 30.0 3.7E+02 0.013 25.6 13.2 173 158-346 139-334 (345)
330 1sfl_A 3-dehydroquinate dehydr 29.6 3.1E+02 0.01 24.5 14.1 138 157-310 14-162 (238)
331 3tva_A Xylose isomerase domain 29.5 1.7E+02 0.0058 26.0 8.1 17 293-309 105-121 (290)
332 3i6e_A Muconate cycloisomerase 29.5 1.9E+02 0.0065 27.8 8.9 50 158-213 148-197 (385)
333 3s83_A Ggdef family protein; s 29.5 2.2E+02 0.0075 25.1 8.8 132 159-313 105-239 (259)
334 3tdn_A FLR symmetric alpha-bet 29.3 11 0.00039 33.9 0.0 73 161-239 157-229 (247)
335 4ab4_A Xenobiotic reductase B; 29.2 1.3E+02 0.0045 29.0 7.6 87 224-310 158-262 (362)
336 2hsa_B 12-oxophytodienoate red 29.2 1.3E+02 0.0046 29.3 7.8 78 157-239 257-348 (402)
337 3gk0_A PNP synthase, pyridoxin 29.1 65 0.0022 30.3 5.1 135 159-313 104-246 (278)
338 1qwg_A PSL synthase;, (2R)-pho 29.0 3.4E+02 0.012 25.0 10.4 131 157-310 23-168 (251)
339 2otd_A Glycerophosphodiester p 29.0 2.2E+02 0.0075 25.2 8.7 98 173-312 139-236 (247)
340 1tmy_A CHEY protein, TMY; chem 28.9 1.6E+02 0.0056 21.6 6.8 38 197-236 64-101 (120)
341 4ab4_A Xenobiotic reductase B; 28.9 88 0.003 30.2 6.3 67 159-239 241-308 (362)
342 3oa3_A Aldolase; structural ge 28.7 2.3E+02 0.008 26.6 9.0 86 157-251 185-273 (288)
343 2hsa_B 12-oxophytodienoate red 28.7 1.1E+02 0.0036 30.1 6.9 88 223-310 175-286 (402)
344 3gnh_A L-lysine, L-arginine ca 28.7 2.8E+02 0.0094 25.6 9.7 82 157-244 164-252 (403)
345 3kht_A Response regulator; PSI 28.7 1.7E+02 0.0059 22.4 7.2 39 196-236 67-107 (144)
346 3kru_A NADH:flavin oxidoreduct 28.6 97 0.0033 29.7 6.5 80 156-239 226-307 (343)
347 3qja_A IGPS, indole-3-glycerol 28.6 1.4E+02 0.0048 27.5 7.4 64 169-239 178-242 (272)
348 3l0g_A Nicotinate-nucleotide p 28.6 2.6E+02 0.009 26.4 9.3 88 195-312 194-281 (300)
349 3p6l_A Sugar phosphate isomera 28.5 2.1E+02 0.0071 25.0 8.4 133 159-309 90-234 (262)
350 4h3d_A 3-dehydroquinate dehydr 28.3 3.4E+02 0.012 24.6 17.0 49 157-209 29-79 (258)
351 3f6c_A Positive transcription 28.2 1.3E+02 0.0044 22.7 6.2 39 196-236 62-100 (134)
352 3vav_A 3-methyl-2-oxobutanoate 28.1 3.7E+02 0.013 25.0 11.9 123 166-309 42-192 (275)
353 3cny_A Inositol catabolism pro 28.0 3.1E+02 0.011 24.1 9.8 140 159-309 89-272 (301)
354 3sbf_A Mandelate racemase / mu 27.9 1.6E+02 0.0056 28.4 8.1 153 157-347 132-308 (401)
355 3go2_A Putative L-alanine-DL-g 27.7 2.9E+02 0.01 26.7 10.0 57 157-213 142-218 (409)
356 1zlp_A PSR132, petal death pro 27.6 3.8E+02 0.013 25.4 10.4 85 221-309 48-135 (318)
357 1ea9_C Cyclomaltodextrinase; h 27.4 71 0.0024 32.6 5.6 62 286-347 168-237 (583)
358 1vyr_A Pentaerythritol tetrani 27.3 1.1E+02 0.0039 29.3 6.8 87 224-310 166-271 (364)
359 1icp_A OPR1, 12-oxophytodienoa 27.2 1.3E+02 0.0043 29.1 7.1 86 223-309 171-275 (376)
360 1eep_A Inosine 5'-monophosphat 27.1 4.2E+02 0.014 25.3 13.7 131 161-312 153-287 (404)
361 1olt_A Oxygen-independent copr 27.0 4.5E+02 0.015 25.6 12.2 62 253-316 215-294 (457)
362 2hmc_A AGR_L_411P, dihydrodipi 27.0 4.1E+02 0.014 25.2 11.0 73 223-309 51-124 (344)
363 1fob_A Beta-1,4-galactanase; B 26.9 1.7E+02 0.006 27.5 8.0 51 222-281 30-80 (334)
364 1z41_A YQJM, probable NADH-dep 26.4 4E+02 0.014 24.9 17.9 87 223-311 148-250 (338)
365 3tsm_A IGPS, indole-3-glycerol 26.3 3.2E+02 0.011 25.2 9.5 117 166-313 135-252 (272)
366 3qy7_A Tyrosine-protein phosph 26.3 1.3E+02 0.0044 27.5 6.6 27 156-182 16-42 (262)
367 3cqj_A L-ribulose-5-phosphate 26.3 2.9E+02 0.01 24.5 9.2 83 222-310 33-128 (295)
368 1rd5_A Tryptophan synthase alp 26.3 3.5E+02 0.012 24.1 10.6 80 222-309 35-124 (262)
369 3qn3_A Enolase; structural gen 26.1 90 0.0031 30.9 5.9 122 157-309 261-387 (417)
370 2nql_A AGR_PAT_674P, isomerase 26.0 1.2E+02 0.0042 29.0 6.8 144 158-347 164-314 (388)
371 2r6o_A Putative diguanylate cy 26.0 1.4E+02 0.0049 27.5 7.0 127 164-313 134-263 (294)
372 3no3_A Glycerophosphodiester p 25.9 3.4E+02 0.012 23.9 9.6 105 163-309 118-223 (238)
373 3kws_A Putative sugar isomeras 25.9 45 0.0016 29.9 3.4 141 160-309 104-261 (287)
374 4fxs_A Inosine-5'-monophosphat 25.6 2.9E+02 0.01 27.6 9.7 81 209-310 220-300 (496)
375 3vk5_A MOEO5; TIM barrel, tran 25.6 3.3E+02 0.011 25.6 9.3 68 162-239 188-256 (286)
376 3l0g_A Nicotinate-nucleotide p 25.5 1.7E+02 0.0057 27.8 7.3 62 164-239 218-279 (300)
377 4f3h_A Fimxeal, putative uncha 25.4 1.3E+02 0.0043 26.6 6.3 133 158-313 108-243 (250)
378 2oz8_A MLL7089 protein; struct 25.4 4.4E+02 0.015 25.0 10.8 146 157-348 144-296 (389)
379 3r12_A Deoxyribose-phosphate a 25.3 2.1E+02 0.0071 26.5 7.8 74 156-238 169-244 (260)
380 3cl6_A PUUE allantoinase; URIC 25.2 1.2E+02 0.004 28.2 6.3 143 164-310 111-291 (308)
381 3cfy_A Putative LUXO repressor 25.2 2.3E+02 0.0079 21.7 9.0 39 196-236 64-102 (137)
382 1vpx_A Protein (transaldolase 25.0 2.3E+02 0.008 25.6 8.0 115 166-310 25-141 (230)
383 3q58_A N-acetylmannosamine-6-p 25.0 2.7E+02 0.0093 24.7 8.5 117 164-312 92-212 (229)
384 3snk_A Response regulator CHEY 24.9 1.5E+02 0.0053 22.5 6.1 39 196-236 75-113 (135)
385 1a04_A Nitrate/nitrite respons 24.8 3E+02 0.01 22.8 8.9 58 196-269 67-124 (215)
386 2pju_A Propionate catabolism o 24.8 1.3E+02 0.0046 27.0 6.3 78 193-270 22-105 (225)
387 1p2f_A Response regulator; DRR 24.7 3E+02 0.01 22.9 8.9 58 196-269 59-116 (220)
388 3pzs_A PM kinase, pyridoxamine 24.7 2.4E+02 0.0083 25.5 8.3 106 157-270 57-176 (289)
389 3o1n_A 3-dehydroquinate dehydr 24.6 2.9E+02 0.0098 25.5 8.8 15 256-270 117-131 (276)
390 1h1y_A D-ribulose-5-phosphate 24.6 2.2E+02 0.0074 25.0 7.7 68 165-239 128-201 (228)
391 1qkk_A DCTD, C4-dicarboxylate 24.6 2.5E+02 0.0085 21.8 8.2 39 196-236 63-101 (155)
392 3rcy_A Mandelate racemase/muco 24.4 2.1E+02 0.0073 28.1 8.3 57 157-213 145-208 (433)
393 3qtp_A Enolase 1; glycolysis, 24.4 2.6E+02 0.0089 27.9 8.9 71 254-343 356-428 (441)
394 2eja_A URO-D, UPD, uroporphyri 24.1 3.6E+02 0.012 25.0 9.6 144 165-341 184-335 (338)
395 2pcq_A Putative dihydrodipicol 24.1 1.2E+02 0.0042 27.9 6.1 47 255-309 47-94 (283)
396 3iwp_A Copper homeostasis prot 24.0 3.6E+02 0.012 25.3 9.3 125 164-309 50-185 (287)
397 3ndo_A Deoxyribose-phosphate a 23.9 4E+02 0.014 24.0 12.7 168 157-355 26-202 (231)
398 3igs_A N-acetylmannosamine-6-p 23.9 2.9E+02 0.0099 24.6 8.5 117 164-312 92-212 (232)
399 3aty_A Tcoye, prostaglandin F2 23.7 1.7E+02 0.0058 28.3 7.3 71 157-239 263-336 (379)
400 1b22_A DNA repair protein RAD5 23.4 1.2E+02 0.004 24.6 5.1 55 221-277 34-88 (114)
401 3cz5_A Two-component response 23.4 2.6E+02 0.0089 21.6 8.2 39 196-236 67-105 (153)
402 3r12_A Deoxyribose-phosphate a 23.4 4.4E+02 0.015 24.3 14.3 166 157-355 56-228 (260)
403 3lye_A Oxaloacetate acetyl hyd 23.3 4.7E+02 0.016 24.6 10.4 136 166-309 38-197 (307)
404 3dx5_A Uncharacterized protein 23.3 3.8E+02 0.013 23.5 9.3 20 162-181 17-36 (286)
405 3lua_A Response regulator rece 23.2 1.5E+02 0.0052 22.6 5.8 40 195-236 66-107 (140)
406 4a3u_A NCR, NADH\:flavin oxido 23.1 4.8E+02 0.017 24.7 13.0 139 156-312 141-317 (358)
407 3vzx_A Heptaprenylglyceryl pho 23.0 4.1E+02 0.014 23.8 10.1 72 157-239 137-208 (228)
408 3bjs_A Mandelate racemase/muco 23.0 4.5E+02 0.015 25.5 10.4 48 158-212 184-233 (428)
409 1u1j_A 5-methyltetrahydroptero 23.0 6.9E+02 0.024 26.4 13.4 119 164-309 589-729 (765)
410 3tqp_A Enolase; energy metabol 22.9 1.4E+02 0.0047 29.6 6.5 153 156-349 262-419 (428)
411 3rqi_A Response regulator prot 22.8 2.9E+02 0.01 22.5 7.9 54 196-251 67-120 (184)
412 2ztj_A Homocitrate synthase; ( 22.7 1.7E+02 0.0057 28.3 7.0 76 157-238 142-220 (382)
413 3bjs_A Mandelate racemase/muco 22.7 4.5E+02 0.016 25.5 10.3 132 158-303 211-357 (428)
414 3aty_A Tcoye, prostaglandin F2 22.6 1.7E+02 0.0057 28.4 7.0 136 155-312 161-338 (379)
415 1lwj_A 4-alpha-glucanotransfer 22.6 1E+02 0.0035 29.9 5.6 61 287-347 20-88 (441)
416 1k68_A Phytochrome response re 22.4 2.5E+02 0.0084 21.0 7.7 39 196-236 71-111 (140)
417 1qo2_A Molecule: N-((5-phospho 22.2 1E+02 0.0036 27.1 5.1 72 161-238 145-222 (241)
418 1ujp_A Tryptophan synthase alp 22.2 3.7E+02 0.013 24.6 9.0 121 162-310 108-229 (271)
419 4bby_A Alkyldihydroxyacetoneph 22.2 1.2E+02 0.0041 31.6 6.2 76 221-310 161-236 (658)
420 3lub_A Putative creatinine ami 22.1 1.7E+02 0.0056 26.8 6.5 51 156-213 89-143 (254)
421 3eod_A Protein HNR; response r 22.1 2.4E+02 0.0081 21.1 6.7 39 196-236 67-105 (130)
422 4e5t_A Mandelate racemase / mu 22.1 1.5E+02 0.0053 28.7 6.7 151 157-345 150-313 (404)
423 4avf_A Inosine-5'-monophosphat 22.0 2.9E+02 0.01 27.5 8.9 121 166-310 172-298 (490)
424 3ch0_A Glycerophosphodiester p 22.0 3.6E+02 0.012 24.0 8.9 106 164-312 157-265 (272)
425 3l12_A Putative glycerophospho 21.9 4.6E+02 0.016 24.0 10.9 107 164-309 169-295 (313)
426 3tqv_A Nicotinate-nucleotide p 21.9 4.4E+02 0.015 24.6 9.5 88 195-312 185-272 (287)
427 3o6c_A PNP synthase, pyridoxin 21.9 1.1E+02 0.0038 28.4 5.2 73 159-239 75-152 (260)
428 4a29_A Engineered retro-aldol 21.8 4.7E+02 0.016 24.1 10.8 129 146-313 103-236 (258)
429 1k66_A Phytochrome response re 21.8 2.6E+02 0.009 21.1 7.3 39 196-236 78-118 (149)
430 1tkk_A Similar to chloromucona 21.8 1.3E+02 0.0044 28.5 5.9 149 158-349 140-296 (366)
431 1o4u_A Type II quinolic acid p 21.7 3.1E+02 0.011 25.5 8.4 91 195-312 179-270 (285)
432 1ub3_A Aldolase protein; schif 21.5 4.3E+02 0.015 23.4 12.1 165 157-353 16-186 (220)
433 1wzl_A Alpha-amylase II; pullu 21.4 1E+02 0.0035 31.4 5.4 62 286-347 169-238 (585)
434 3i65_A Dihydroorotate dehydrog 21.4 3.4E+02 0.011 26.8 9.0 27 285-311 278-304 (415)
435 3ivs_A Homocitrate synthase, m 21.4 2.7E+02 0.0093 27.5 8.3 76 157-238 177-254 (423)
436 2a4a_A Deoxyribose-phosphate a 21.3 5E+02 0.017 24.1 11.0 154 157-339 45-213 (281)
437 3r0j_A Possible two component 21.3 3.6E+02 0.012 23.1 8.5 58 196-269 83-140 (250)
438 1g94_A Alpha-amylase; beta-alp 21.3 1.7E+02 0.0058 28.5 6.8 67 280-346 4-82 (448)
439 1y0e_A Putative N-acetylmannos 21.2 3.9E+02 0.013 22.8 13.2 126 164-312 79-206 (223)
440 3stp_A Galactonate dehydratase 21.2 1.5E+02 0.0051 29.0 6.4 151 158-348 179-338 (412)
441 2qsj_A DNA-binding response re 21.1 2.9E+02 0.0099 21.3 9.2 39 196-236 66-104 (154)
442 1dbw_A Transcriptional regulat 21.1 2.6E+02 0.0088 20.8 10.1 58 196-269 63-120 (126)
443 3cwo_X Beta/alpha-barrel prote 21.1 2.6E+02 0.0087 23.5 7.3 105 159-283 129-233 (237)
444 1y8q_A Ubiquitin-like 1 activa 21.0 5.2E+02 0.018 24.3 10.4 56 163-218 49-115 (346)
445 3t4x_A Oxidoreductase, short c 21.0 3.7E+02 0.013 23.6 8.7 67 163-239 24-92 (267)
446 1mxs_A KDPG aldolase; 2-keto-3 21.0 2.9E+02 0.0098 24.6 7.8 90 157-269 127-220 (225)
447 2p10_A MLL9387 protein; putati 20.8 2.5E+02 0.0085 26.4 7.4 132 166-310 41-190 (286)
448 4aie_A Glucan 1,6-alpha-glucos 20.7 1.1E+02 0.0037 30.2 5.3 89 216-309 29-199 (549)
449 2yxb_A Coenzyme B12-dependent 20.6 3.7E+02 0.013 22.4 9.6 68 157-235 56-124 (161)
450 2xsa_A Ogoga, hyaluronoglucosa 20.6 3.5E+02 0.012 27.0 8.9 62 280-345 4-74 (447)
451 2v5j_A 2,4-dihydroxyhept-2-ENE 20.4 3.3E+02 0.011 25.1 8.3 73 165-245 52-125 (287)
452 2qr3_A Two-component system re 20.3 2.8E+02 0.0096 20.8 8.3 39 196-236 68-106 (140)
453 4gxw_A Adenosine deaminase; am 20.3 2.9E+02 0.01 26.6 8.2 114 222-347 99-215 (380)
454 1to3_A Putative aldolase YIHT; 20.2 5.2E+02 0.018 23.9 12.8 131 164-312 112-256 (304)
455 3fv9_G Mandelate racemase/muco 20.0 5.7E+02 0.02 24.3 10.6 151 157-346 144-298 (386)
456 2zay_A Response regulator rece 20.0 3E+02 0.01 21.0 8.3 39 196-236 68-108 (147)
No 1
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=99.94 E-value=2.2e-26 Score=226.23 Aligned_cols=235 Identities=15% Similarity=0.234 Sum_probs=179.1
Q ss_pred cHHHHHHHHhh---cChhhhhhhcCCCCcccccCCCCCCccEEEEeeeCCccCCCCcCCCCCCCCCCC--CCCchhHHHH
Q 017179 91 KYVQIKKKLRE---LKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAPP--PPDPDEPTNV 165 (376)
Q Consensus 91 ~~~~~~~~l~~---~~L~tvce~A~cpn~~ec~~~~~~~~~tat~m~i~d~C~~~C~FC~v~~~r~~~--~l~~eEi~~~ 165 (376)
+..++..++.. .+|..+++.|+-.+.. .+|+. -...+++.++++|+.+|.||+++...... .++++|+++.
T Consensus 24 ~~~e~~~l~~~~~~~~~~~L~~~A~~~r~~-~~g~~---v~~~~~i~~t~~C~~~C~fC~~~~~~~~~~~~ls~eei~~~ 99 (350)
T 3t7v_A 24 TDNDLRTLLSLESKEGLERLYSAARKVRDH-YFGNR---VFLNCFIYFSTYCKNQCSFCYYNCRNEINRYRLTMEEIKET 99 (350)
T ss_dssp CHHHHHHHHTCCSHHHHHHHHHHHHHHHHH-HHTTE---EEEEEEEEEECCCCCCCTTCTTCTTSCCCCCBCCHHHHHHH
T ss_pred CHHHHHHHhcCCChhHHHHHHHHHHHHHHH-HCCCE---EEEEEeeecCCCcCCCCCcCCCcCcCCCCceeCCHHHHHHH
Confidence 35677777764 3567777777643332 22321 11223466799999999999998654222 3899999999
Q ss_pred HHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccch-H
Q 017179 166 AEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETV-E 244 (376)
Q Consensus 166 a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv-~ 244 (376)
++.+.+.|+++|+|+||+.+.+. ...+++.++++.|++.++ +.+.+..+.. +.+.++.|+++|++.+.+++|+. +
T Consensus 100 ~~~~~~~G~~~i~l~gGe~p~~~-~~~~~~~~l~~~ik~~~~-i~i~~s~g~~--~~e~l~~L~~aG~~~i~i~lEt~~~ 175 (350)
T 3t7v_A 100 CKTLKGAGFHMVDLTMGEDPYYY-EDPNRFVELVQIVKEELG-LPIMISPGLM--DNATLLKAREKGANFLALYQETYDT 175 (350)
T ss_dssp HHHHTTSCCSEEEEEECCCHHHH-HSTHHHHHHHHHHHHHHC-SCEEEECSSC--CHHHHHHHHHTTEEEEECCCBCSCH
T ss_pred HHHHHHCCCCEEEEeeCCCCccc-cCHHHHHHHHHHHHhhcC-ceEEEeCCCC--CHHHHHHHHHcCCCEEEEeeecCCH
Confidence 99999999999999999755331 014678999999997764 6776544334 78999999999999999999987 6
Q ss_pred HHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecCCCCCCCCCCCcc
Q 017179 245 ELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSE 324 (376)
Q Consensus 245 ~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY~~P~~~~~~v~~ 324 (376)
++|++|+ +++++++++++++.+++. |+.+++++|+|+|||.+|+.++++++++++++.++|.+|. | ..++++.+
T Consensus 176 ~~~~~i~-~~~~~~~~l~~i~~a~~~---Gi~v~~~~i~Glget~e~~~~~l~~l~~l~~~~v~~~~f~-p-~~gT~l~~ 249 (350)
T 3t7v_A 176 ELYRKLR-VGQSFDGRVNARRFAKQQ---GYCVEDGILTGVGNDIESTILSLRGMSTNDPDMVRVMTFL-P-QEGTPLEG 249 (350)
T ss_dssp HHHHHHS-TTCCHHHHHHHHHHHHHH---TCEEEEEEEESSSCCHHHHHHHHHHHHHTCCSEEEEEECC-C-CTTSTTTT
T ss_pred HHHHHhC-CCCCHHHHHHHHHHHHHc---CCeEccceEeecCCCHHHHHHHHHHHHhCCCCEEEeccee-e-CCCCcCcc
Confidence 9999999 589999999999999995 7999999999999999999999999999999999997665 5 35677665
Q ss_pred cCChHHHHHHHHHHH
Q 017179 325 YITPEAFERYRALGM 339 (376)
Q Consensus 325 ~v~pe~~~~l~~~a~ 339 (376)
...+...+.++.+|.
T Consensus 250 ~~~~~~~e~l~~ia~ 264 (350)
T 3t7v_A 250 FRDKSNLSELKIISV 264 (350)
T ss_dssp CCCCCCCCHHHHHHH
T ss_pred CCCCChHHHHHHHHH
Confidence 433333333343433
No 2
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=99.92 E-value=2.1e-23 Score=203.85 Aligned_cols=227 Identities=16% Similarity=0.293 Sum_probs=177.5
Q ss_pred cHHHHHHHHhhcC---hhhhhhhcCCCCcccccCCCCCCccEEE---EeeeCCccCCCCcCCCCCCCCCC-C--CCCchh
Q 017179 91 KYVQIKKKLRELK---LHTVCEEAKCPNLGECWSGGETGTATAT---IMILGDTCTRGCRFCNVKTSRAP-P--PPDPDE 161 (376)
Q Consensus 91 ~~~~~~~~l~~~~---L~tvce~A~cpn~~ec~~~~~~~~~tat---~m~i~d~C~~~C~FC~v~~~r~~-~--~l~~eE 161 (376)
+..++..++...+ +..+++.|+-.+.. .+|+ ..+ ++.++++|+.+|.||.+....+. . .++++|
T Consensus 16 ~~~e~~~ll~~~~~~~~~~l~~~A~~ir~~-~~g~------~v~~~~~i~~t~~C~~~C~fC~~~~~~~~~~~~~ls~ee 88 (348)
T 3iix_A 16 TREVLKEALSINDRGFNEALFKLADEIRRK-YVGD------EVHIRAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEE 88 (348)
T ss_dssp CHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-HHCS------EEEEEEEEEEECCCSCCCTTCTTCTTCCSSCCCBCCHHH
T ss_pred CHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-HcCC------EEEEEEEeEecCCcCCcCccCCCCCCCCCcCceeCCHHH
Confidence 4567777776543 56677776644432 2332 333 25679999999999998865422 1 379999
Q ss_pred HHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccccc
Q 017179 162 PTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIE 241 (376)
Q Consensus 162 i~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lE 241 (376)
+++.++.+.+.|+++|+|+||+.+.+. .+++.++++.|++. ++.|.+..+.. +++.++.|+++|++.+.+++|
T Consensus 89 i~~~i~~~~~~g~~~i~~~gGe~p~~~---~~~~~~li~~i~~~--~~~i~~s~g~l--~~e~l~~L~~ag~~~v~i~le 161 (348)
T 3iix_A 89 IVERARLAVQFGAKTIVLQSGEDPYXM---PDVISDIVKEIKKM--GVAVTLSLGEW--PREYYEKWKEAGADRYLLRHE 161 (348)
T ss_dssp HHHHHHHHHHTTCSEEEEEESCCGGGT---THHHHHHHHHHHTT--SCEEEEECCCC--CHHHHHHHHHHTCCEEECCCB
T ss_pred HHHHHHHHHHCCCCEEEEEeCCCCCcc---HHHHHHHHHHHHhc--CceEEEecCCC--CHHHHHHHHHhCCCEEeeeee
Confidence 999999999999999999999855443 46799999999886 67777544444 789999999999999999999
Q ss_pred ch-HHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHHHcCCcEEEeecCCCCCCCC
Q 017179 242 TV-EELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRH 319 (376)
Q Consensus 242 tv-~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lrel~vd~v~~~qY~~P~~~~ 319 (376)
+. +++++.++ ++.+++++++.++.+++ .|+.+.+++|+|+ |||.+++.++++++++++++.+.+.+|. | ..+
T Consensus 162 t~~~~~~~~i~-~~~~~~~~~~~i~~~~~---~Gi~v~~~~i~G~p~et~e~~~~~~~~l~~l~~~~i~i~~~~-p-~~g 235 (348)
T 3iix_A 162 TANPVLHRKLR-PDTSFENRLNCLLTLKE---LGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFI-P-HPD 235 (348)
T ss_dssp CSCHHHHHHHS-TTSCHHHHHHHHHHHHH---TTCEEEECBEESCTTCCHHHHHHHHHHHHHHTCSEECCEECC-C-CTT
T ss_pred eCCHHHHHHhC-CCcCHHHHHHHHHHHHH---hCCeeccceEEeCCCCCHHHHHHHHHHHHhcCCCEEeeeeee-c-CCC
Confidence 87 59999999 56799999999999999 5899999999999 9999999999999999999999997665 6 356
Q ss_pred CCCcccCChHHHHHHHHH
Q 017179 320 MPVSEYITPEAFERYRAL 337 (376)
Q Consensus 320 ~~v~~~v~pe~~~~l~~~ 337 (376)
+++.+...+...+.++.+
T Consensus 236 t~l~~~~~~~~~e~~~~~ 253 (348)
T 3iix_A 236 TPLANEKKGDFTLTLKMV 253 (348)
T ss_dssp STTTTSCCCCHHHHHHHH
T ss_pred CCcccCCCCCHHHHHHHH
Confidence 777665433333333333
No 3
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=99.91 E-value=2.3e-23 Score=201.78 Aligned_cols=213 Identities=16% Similarity=0.269 Sum_probs=151.7
Q ss_pred EEEEeeeCCccCCCCcCCCCCCCCCCC-CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcc--cHHHHHHHHHHHHhh
Q 017179 129 TATIMILGDTCTRGCRFCNVKTSRAPP-PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQ--GSGHFAQTVRKLKEL 205 (376)
Q Consensus 129 tat~m~i~d~C~~~C~FC~v~~~r~~~-~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~--g~~~~~elvr~Ik~~ 205 (376)
+..|+.++++|+.+|+||.++..+++. .++++++++.++.+.+.|+++|+|+|++-..+..+ +...+.++++.|++.
T Consensus 4 ~~~~v~is~GC~~~C~fC~~~~~~g~~r~r~~e~i~~ei~~l~~~G~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~ 83 (304)
T 2qgq_A 4 PYAYVKISDGCDRGCTFCSIPSFKGSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSL 83 (304)
T ss_dssp SEEEEESBCCC-------------CCCCBCCHHHHHHHHHHHHHTTCCEEEEECTTGGGTTHHHHSSCCHHHHHHHHHTS
T ss_pred EEEEEEECCCCCCcCccCCccccCCCceeeCHHHHHHHHHHHHHCCCcEEEEEeEcccccCCCCCcHHHHHHHHHHHHhc
Confidence 677888999999999999999765443 58999999999999999999999998753222100 124588999999875
Q ss_pred CCCc-EEEEe--cCCCCCChHHHHHHHHcC--cccccccccch-HHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEE
Q 017179 206 KPNM-LIEAL--VPDFRGNNGCVREVAKSG--LNVFAHNIETV-EELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKT 279 (376)
Q Consensus 206 ~p~i-~Ie~l--~pd~~g~~e~l~~L~~aG--ld~i~h~lEtv-~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt 279 (376)
+++ ++.+. .|+.. +++.++.|+++| ++.+..++|+. +++++.|+ |+++++++++.++.+++.+|+ +.+.+
T Consensus 84 -~gi~~ir~~~~~p~~l-~~e~l~~l~~~g~~~~~l~i~lqs~s~~vl~~m~-r~~t~e~~~~~i~~l~~~~~g-i~i~~ 159 (304)
T 2qgq_A 84 -NGEFWIRVMYLHPDHL-TEEIISAMLELDKVVKYFDVPVQHGSDKILKLMG-RTKSSEELKKMLSSIRERFPD-AVLRT 159 (304)
T ss_dssp -SSSCEEEECCCCGGGC-CHHHHHHHHHCTTBCCEEECCCBCSCHHHHHHTT-CCSCHHHHHHHHHHHHHHCTT-CEEEE
T ss_pred -CCCcEEEEeeeecccC-CHHHHHHHHhCCCCccEEEEecccCCHHHHHHhC-CCCCHHHHHHHHHHHHhhCCC-CEEEE
Confidence 444 56543 35433 789999999999 88899999974 69999999 899999999999999998664 99999
Q ss_pred eEEEec-CCCHHHHHHHHHHHHHcCCcEEEeecCC-CCCCCCCCCcccCC----hHHHHHHHHHHHHHhhhh
Q 017179 280 SIMLGC-GETPDQVVSTMEKVRAAGVDVMTFGQYM-RPSKRHMPVSEYIT----PEAFERYRALGMEMGFRY 345 (376)
Q Consensus 280 ~imvGl-GET~ee~~e~L~~Lrel~vd~v~~~qY~-~P~~~~~~v~~~v~----pe~~~~l~~~a~~~gf~~ 345 (376)
++|+|| |||++|+.++++++++++++.+.+++|+ .|+.....+...++ .++++.+++++.++...+
T Consensus 160 ~~IvG~PgEt~ed~~~t~~~l~~l~~~~v~~~~~~p~pgT~~~~~~~~v~~~~~~~r~~~l~~~~~~~~~~~ 231 (304)
T 2qgq_A 160 SIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDEEGTVAFNLKEKVDPEMAKRRQEELLLLQAEISNSR 231 (304)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECCC-----------CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEEeeCCCCChhHhCcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 9999999999999999999999999886 34222111222344 345666777776655443
No 4
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=99.89 E-value=4.4e-22 Score=197.20 Aligned_cols=231 Identities=14% Similarity=0.216 Sum_probs=171.5
Q ss_pred HHHHHHHhhcChhhhhhhcCCCCcccccCCCCCCccEEEEeee-CCccCCCCcCCCCCCCC--C--CC-CCCchhHHHHH
Q 017179 93 VQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMIL-GDTCTRGCRFCNVKTSR--A--PP-PPDPDEPTNVA 166 (376)
Q Consensus 93 ~~~~~~l~~~~L~tvce~A~cpn~~ec~~~~~~~~~tat~m~i-~d~C~~~C~FC~v~~~r--~--~~-~l~~eEi~~~a 166 (376)
.++..+++ ..+..+++.|.-.+...+.++. -...+++.+ +++|+.+|.||.++... + .. .++++|+++.+
T Consensus 33 ~e~~~l~~-~~~~~L~~~A~~~~~~~~~~~~---v~~~~~i~i~t~~C~~~C~yC~~~~~~~~~~~~~~~~s~eei~~~~ 108 (369)
T 1r30_A 33 SQVTELFE-KPLLDLLFEAQQVHRQHFDPRQ---VQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESA 108 (369)
T ss_dssp TTTHHHHH-SCHHHHHHHHHHHHHHHSCTTC---CEEEEEEEEECSCBSSCCSSCSCBTTSCTTCCCCCCCCHHHHHHHH
T ss_pred HHHHHHHh-ccHHHHHHHHHHHHHHhcCCCE---EEEEEEEEEECCCCcccCccCCCCCcCCCCCcccccCCHHHHHHHH
Confidence 33444554 4667777776654443221221 112444554 99999999999988631 1 11 37999999999
Q ss_pred HHHHHCCCcEEEEEeeeC-CCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHH
Q 017179 167 EAIASWGLDYVVITSVDR-DDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEE 245 (376)
Q Consensus 167 ~al~~~G~~eIvLTsg~r-~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~ 245 (376)
+.+.+.|++.|+|+|+.. +.. ...+++.++++.|++. ++.|. +++... +++.++.|+++|+|.+++++|+.++
T Consensus 109 ~~~~~~g~~~i~~~gg~~~p~~--~~~~~l~~ll~~ik~~--g~~i~-~t~G~l-~~e~l~~L~~aGvd~v~i~les~~e 182 (369)
T 1r30_A 109 RKAKAAGSTRFCMGAAWKNPHE--RDMPYLEQMVQGVKAM--GLEAC-MTLGTL-SESQAQRLANAGLDYYNHNLDTSPE 182 (369)
T ss_dssp HHHHHTTCSEEEEEECCSSCCT--TTHHHHHHHHHHHHHT--TSEEE-EECSSC-CHHHHHHHHHHCCCEEECCCBSCHH
T ss_pred HHHHHcCCcEEEEEeCCCCCCc--CCHHHHHHHHHHHHHc--CCeEE-EecCCC-CHHHHHHHHHCCCCEEeecCcCCHH
Confidence 999999999999998742 211 2267899999999986 35554 355443 7899999999999999999999779
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcC--CcEEEeecCCCCCCCCCCCc
Q 017179 246 LQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAG--VDVMTFGQYMRPSKRHMPVS 323 (376)
Q Consensus 246 l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~--vd~v~~~qY~~P~~~~~~v~ 323 (376)
+|+.++ ++++++++++.++.+++. |+.+++++|+|+|||.+|+.++++++++++ ++.+++..| .| ..++++.
T Consensus 183 ~~~~i~-~~~~~~~~l~~i~~a~~~---Gi~v~~~~I~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~l-~p-~~gT~l~ 256 (369)
T 1r30_A 183 FYGNII-TTRTYQERLDTLEKVRDA---GIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINML-VK-VKGTPLA 256 (369)
T ss_dssp HHHHHC-CSSCHHHHHHHHHHHHHH---HCEEECCEEECSSCCHHHHHHHHHHHHSSSSCCSEEEEEEC-CC-CTTSTTS
T ss_pred HHHHhC-CCCCHHHHHHHHHHHHHc---CCeeeeeeEeeCCCCHHHHHHHHHHHHhhcCCCCEEEeeee-ee-cCCCcCC
Confidence 999999 689999999999999995 789999999999999999999999999998 889998555 46 3466665
Q ss_pred cc--CChHHHHHHHHHHH
Q 017179 324 EY--ITPEAFERYRALGM 339 (376)
Q Consensus 324 ~~--v~pe~~~~l~~~a~ 339 (376)
+. ++++++..+..+++
T Consensus 257 ~~~~~~~~~~~~~~~~~r 274 (369)
T 1r30_A 257 DNDDVDAFDFIRTIAVAR 274 (369)
T ss_dssp SCCCCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHH
Confidence 43 33444444444443
No 5
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=99.73 E-value=5.4e-17 Score=165.43 Aligned_cols=218 Identities=15% Similarity=0.229 Sum_probs=158.1
Q ss_pred EEEEeeeCCccCCCCcCCCCCCCCC-CC---CCCchhHHHHHHHHHHC----CCcEEEEEeeeCCCCCcccHHHHHHHHH
Q 017179 129 TATIMILGDTCTRGCRFCNVKTSRA-PP---PPDPDEPTNVAEAIASW----GLDYVVITSVDRDDLADQGSGHFAQTVR 200 (376)
Q Consensus 129 tat~m~i~d~C~~~C~FC~v~~~r~-~~---~l~~eEi~~~a~al~~~----G~~eIvLTsg~r~dl~d~g~~~~~elvr 200 (376)
...|+.+. .|+.+|.||.+..... .. ....+++.++++.+.+. ++..|.++||+...++ .+.+.++++
T Consensus 53 ~~lYihIp-fC~~~C~yC~~~~~~~~~~~~~~~~~~~l~~Ei~~~~~~~~~~~i~~i~fgGGtpt~l~---~~~l~~ll~ 128 (457)
T 1olt_A 53 LSLYVHIP-FCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLN---KAQISRLMK 128 (457)
T ss_dssp EEEEEEEC-EESSCCTTCCSSCEECSCTHHHHHHHHHHHHHHHHHGGGGTTCCEEEEEEEESCGGGSC---HHHHHHHHH
T ss_pred eEEEEEcC-CCCCCCCCCCCceeccCCcchHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCCcccCC---HHHHHHHHH
Confidence 45566664 6999999999886321 11 12346666666665543 4678888887643233 567999999
Q ss_pred HHHhhCC-----CcEEEEecCCCCCChHHHHHHHHcCcccccccccch-HHHHHhhcCCCCCHHHHHHHHHHHHHhCCCC
Q 017179 201 KLKELKP-----NMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETV-EELQSAVRDHRANFKQSLDVLMMAKDYVPAG 274 (376)
Q Consensus 201 ~Ik~~~p-----~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv-~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~G 274 (376)
.|++.++ .+.++ .-|+.. +++.++.|+++|++.+.+++|+. +++++.|+ |+++++++++.++.+++ .|
T Consensus 129 ~i~~~~~~~~~~eitie-~~p~~l-~~e~l~~L~~~G~~rislGvQS~~~~~l~~i~-R~~~~~~~~~ai~~~r~---~G 202 (457)
T 1olt_A 129 LLRENFQFNADAEISIE-VDPREI-ELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVN-REQDEEFIFALLNHARE---IG 202 (457)
T ss_dssp HHHHHSCEEEEEEEEEE-ECSSSC-CTHHHHHHHHTTCCEEEEEEECCCHHHHHHHT-CCCCHHHHHHHHHHHHH---TT
T ss_pred HHHHhCCCCCCcEEEEE-EccCcC-CHHHHHHHHHcCCCEEEEeeccCCHHHHHHhC-CCCCHHHHHHHHHHHHH---cC
Confidence 9988653 23343 245543 78999999999999999999986 59999999 89999999999999999 47
Q ss_pred ce-EEEeEEEec-CCCHHHHHHHHHHHHHcCCcEEEeecCC-CCCCCCCC-C-ccc--CChH----HHHHHHHHHHHHhh
Q 017179 275 TL-TKTSIMLGC-GETPDQVVSTMEKVRAAGVDVMTFGQYM-RPSKRHMP-V-SEY--ITPE----AFERYRALGMEMGF 343 (376)
Q Consensus 275 i~-tkt~imvGl-GET~ee~~e~L~~Lrel~vd~v~~~qY~-~P~~~~~~-v-~~~--v~pe----~~~~l~~~a~~~gf 343 (376)
+. +++++|+|+ |||.+++.++++.+.+++++.+.+.+|. .|...... . .+. +.++ .++...+...+.||
T Consensus 203 ~~~v~~dlI~GlPget~e~~~~tl~~~~~l~~~~i~~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~Gy 282 (457)
T 1olt_A 203 FTSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGY 282 (457)
T ss_dssp CCSCEEEEEESCTTCCHHHHHHHHHHHHHHCCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCcEEEEEEcCCCCCCHHHHHHHHHHHHhcCcCEEEeecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHHCCC
Confidence 87 999999999 9999999999999999999999998886 44321111 1 111 1222 24444555667788
Q ss_pred hhhccchhHhhhh
Q 017179 344 RYVASGPMVRSSY 356 (376)
Q Consensus 344 ~~~~sgp~vrssy 356 (376)
.....+.++|..+
T Consensus 283 ~~yeis~fa~~~~ 295 (457)
T 1olt_A 283 QFIGMDHFARPDD 295 (457)
T ss_dssp EEEETTEEECTTS
T ss_pred eEEEechhcCCCc
Confidence 7776666776553
No 6
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=99.65 E-value=7e-15 Score=143.37 Aligned_cols=172 Identities=17% Similarity=0.268 Sum_probs=134.4
Q ss_pred EeeeCCccCCCCcCCCCCC----CC----CCCCCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHH
Q 017179 132 IMILGDTCTRGCRFCNVKT----SR----APPPPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLK 203 (376)
Q Consensus 132 ~m~i~d~C~~~C~FC~v~~----~r----~~~~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik 203 (376)
.+.++++|+.+|.||.... .. ....++.+++.+.++.+.+.|++.|.||||+.--.++ +.++++.++
T Consensus 17 ~i~~T~~CNl~C~yC~~~~~~~~~~~~~~~~~~ls~e~i~~~i~~~~~~g~~~i~~tGGEPll~~~-----l~~li~~~~ 91 (340)
T 1tv8_A 17 RLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRD-----LDVLIAKLN 91 (340)
T ss_dssp EEECCSCCSCCCTTTSCTTTSSTTCCCCCGGGSCCHHHHHHHHHHHHHTTCCEEEEESSCGGGSTT-----HHHHHHHHT
T ss_pred EEEeCCCcCCcCCCCCcCcccCCCcccCCccCCCCHHHHHHHHHHHHHCCCCEEEEeCCCccchhh-----HHHHHHHHH
Confidence 4557999999999998765 11 1124899999999999999999999999987322222 678888887
Q ss_pred hhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccch-HHHHHhhcCCCC-CHHHHHHHHHHHHHhCCCCceEEEeE
Q 017179 204 ELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETV-EELQSAVRDHRA-NFKQSLDVLMMAKDYVPAGTLTKTSI 281 (376)
Q Consensus 204 ~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv-~~l~~~vr~r~~-t~e~~L~vl~~ak~~~p~Gi~tkt~i 281 (376)
+......+.+.+-... ..+.++.|+++|++.+.+++|+. ++.++.++ ++. ++++.++.|+.+++ .|+.++.++
T Consensus 92 ~~~~~~~i~i~TNG~l-l~~~~~~L~~~g~~~v~iSld~~~~~~~~~i~-~~~~~~~~v~~~i~~l~~---~g~~v~i~~ 166 (340)
T 1tv8_A 92 QIDGIEDIGLTTNGLL-LKKHGQKLYDAGLRRINVSLDAIDDTLFQSIN-NRNIKATTILEQIDYATS---IGLNVKVNV 166 (340)
T ss_dssp TCTTCCEEEEEECSTT-HHHHHHHHHHHTCCEEEEECCCSSHHHHHHHH-SSCCCHHHHHHHHHHHHH---TTCEEEEEE
T ss_pred hCCCCCeEEEEeCccc-hHHHHHHHHHCCCCEEEEecCCCCHHHHHHhh-CCCCCHHHHHHHHHHHHH---CCCCEEEEE
Confidence 7543225555553221 24678999999999999999986 58999999 566 99999999999999 478889998
Q ss_pred EEecCCCHHHHHHHHHHHHHcCCcEEEeecCCCC
Q 017179 282 MLGCGETPDQVVSTMEKVRAAGVDVMTFGQYMRP 315 (376)
Q Consensus 282 mvGlGET~ee~~e~L~~Lrel~vd~v~~~qY~~P 315 (376)
++.-|++++|+.++++++++++++ +.+.+|+ |
T Consensus 167 vv~~g~n~~ei~~~~~~~~~~g~~-~~~i~~~-p 198 (340)
T 1tv8_A 167 VIQKGINDDQIIPMLEYFKDKHIE-IRFIEFM-D 198 (340)
T ss_dssp EECTTTTGGGHHHHHHHHHHTTCC-EEEEECC-C
T ss_pred EEeCCCCHHHHHHHHHHHHhcCCe-EEEEEee-E
Confidence 886699999999999999999998 3443554 5
No 7
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=99.56 E-value=5.1e-14 Score=128.99 Aligned_cols=204 Identities=11% Similarity=0.144 Sum_probs=144.3
Q ss_pred EEEEeeeCCccCCCCcCCCCCCCC--CC-CCCCchhHHHHHHHHHHC---CCcEEEEEeeeCCCCCcccHHHHHHHHHHH
Q 017179 129 TATIMILGDTCTRGCRFCNVKTSR--AP-PPPDPDEPTNVAEAIASW---GLDYVVITSVDRDDLADQGSGHFAQTVRKL 202 (376)
Q Consensus 129 tat~m~i~d~C~~~C~FC~v~~~r--~~-~~l~~eEi~~~a~al~~~---G~~eIvLTsg~r~dl~d~g~~~~~elvr~I 202 (376)
..++ +++++|+.+|.||..+... .. ..++++++.+.++.+.+. ++..|.|+||+.- + . .+.+.++++.+
T Consensus 20 ~~~~-i~t~~Cn~~C~~C~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~~~GGEP~-l-~--~~~l~~l~~~~ 94 (245)
T 3c8f_A 20 IRFI-TFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEAI-L-Q--AEFVRDWFRAC 94 (245)
T ss_dssp EEEE-EEESCCSCCCTTCSCGGGCCTTCSEEECHHHHHHHHGGGHHHHTSTTCEEEEEESCGG-G-G--HHHHHHHHHHH
T ss_pred cEEE-EEeCCCCCCCCCCCCchhcccccCccCCHHHHHHHHHHhhhhhcCCCCeEEEECCCcC-C-C--HHHHHHHHHHH
Confidence 4444 4678999999999886432 11 237889999988877654 4789999998632 2 1 34467899999
Q ss_pred HhhCCCcEEEEecCCCCC-ChHHHHHHHHcCcccccccccch-HHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEe
Q 017179 203 KELKPNMLIEALVPDFRG-NNGCVREVAKSGLNVFAHNIETV-EELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTS 280 (376)
Q Consensus 203 k~~~p~i~Ie~l~pd~~g-~~e~l~~L~~aGld~i~h~lEtv-~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~ 280 (376)
++. ++.+.+.+-.+.- +.+.++.|.+. ++.+..++++. ++.+++++ + .++++.++.++.+++. |+.+...
T Consensus 95 ~~~--~~~i~i~Tng~~~~~~~~~~~l~~~-~~~v~isld~~~~~~~~~~~-~-~~~~~~~~~i~~l~~~---g~~v~i~ 166 (245)
T 3c8f_A 95 KKE--GIHTCLDTNGFVRRYDPVIDELLEV-TDLVMLDLKQMNDEIHQNLV-G-VSNHRTLEFAKYLANK---NVKVWIR 166 (245)
T ss_dssp HTT--TCCEEEEECCCCCCCCHHHHHHHHT-CSEEEEECCCSSHHHHHHHH-S-SCSHHHHHHHHHHHHH---TCCEEEE
T ss_pred HHc--CCcEEEEeCCCcCcCHHHHHHHHHh-CCEEEEeCCCCCHHHhhhcc-C-CCHHHHHHHHHHHHhc---CCEEEEE
Confidence 875 4556555532221 46778888887 88899999985 69999998 3 4579999999999985 4554444
Q ss_pred --EEEecCCCHHHHHHHHHHHHHcCC-cEEEeecCCCCCC-------CCCCCc--ccCChHHHHHHHHHHHHHhhhh
Q 017179 281 --IMLGCGETPDQVVSTMEKVRAAGV-DVMTFGQYMRPSK-------RHMPVS--EYITPEAFERYRALGMEMGFRY 345 (376)
Q Consensus 281 --imvGlGET~ee~~e~L~~Lrel~v-d~v~~~qY~~P~~-------~~~~v~--~~v~pe~~~~l~~~a~~~gf~~ 345 (376)
++-|++++.+++.++++++++++. +.+.+.+|..... +..+.. ..+++++.+.+.+.+.+.||..
T Consensus 167 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v 243 (245)
T 3c8f_A 167 YVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQYGHKV 243 (245)
T ss_dssp EEECTTTTCCHHHHHHHHHHHHHHCCEEEEEEEECCCCSHHHHHHTTCCCTTTTCCCCCHHHHHHHHHHHHTTTCCB
T ss_pred EeecCCCCCCHHHHHHHHHHHHhcCCCceeEEEeccccChhHHHhhCcccccccCCCCCHHHHHHHHHHHHhcCCee
Confidence 444556888999999999999995 7788877753221 111222 2345677888888888888754
No 8
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=99.50 E-value=6.9e-13 Score=129.55 Aligned_cols=204 Identities=14% Similarity=0.098 Sum_probs=141.2
Q ss_pred CccCCCCcCCCCCCCC------CCCCCCchhHHHHHHHHHH------CC--------------CcEEEEE-eeeCCCCCc
Q 017179 137 DTCTRGCRFCNVKTSR------APPPPDPDEPTNVAEAIAS------WG--------------LDYVVIT-SVDRDDLAD 189 (376)
Q Consensus 137 d~C~~~C~FC~v~~~r------~~~~l~~eEi~~~a~al~~------~G--------------~~eIvLT-sg~r~dl~d 189 (376)
++|+.+|.||..+... ....++++|+++.+..... .| ++.|+|+ ||+.--.+
T Consensus 79 ~gCnl~C~fC~~~~~~~~~~~~~~~~~~~eei~~~i~~~~~~~~~~~~g~~~v~~~~~~e~~~~~~v~~sggGEPll~~- 157 (342)
T 2yx0_A 79 AWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKGNPKVDKKKFEEAWNPTHAAISLSGEPMLYP- 157 (342)
T ss_dssp SCCSBCCTTCCCSSSSCSCSSCCSSCCCHHHHHHHHHHHHHHHHTTCC--CCSCHHHHHHHTSCCEEEECSSSCGGGST-
T ss_pred hhhhCcCcccCCCCCCCcccccccCcCCHHHHHHHHHHHHHHHhhccCCCcccchhhhhhccCCCEEEEcCCCcccchh-
Confidence 7999999999986431 1123788888876655432 12 5789998 66522112
Q ss_pred ccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcC--cccccccccch-HHHHHhhcCC--CCCHHHHHHHH
Q 017179 190 QGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG--LNVFAHNIETV-EELQSAVRDH--RANFKQSLDVL 264 (376)
Q Consensus 190 ~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG--ld~i~h~lEtv-~~l~~~vr~r--~~t~e~~L~vl 264 (376)
.+.++++.+++. ++.+.+.+-.. .++.++.|+++| ++.+.+++++. +++++.+++. +.++++.++.+
T Consensus 158 ----~l~~ll~~~~~~--g~~i~l~TNG~--~~e~l~~L~~~g~~~~~l~isld~~~~e~~~~i~~~~~~~~~~~~~~~i 229 (342)
T 2yx0_A 158 ----YMGDLVEEFHKR--GFTTFIVTNGT--IPERLEEMIKEDKLPTQLYVSITAPDIETYNSVNIPMIPDGWERILRFL 229 (342)
T ss_dssp ----THHHHHHHHHHT--TCEEEEEECSC--CHHHHHHHHHTTCCCSEEEEEECCSSHHHHHHHHCBSSSCHHHHHHHHH
T ss_pred ----hHHHHHHHHHHC--CCcEEEEcCCC--cHHHHHHHHhcCCCCCEEEEEccCCCHHHHHHHhCCCcccHHHHHHHHH
Confidence 377888888775 56777666444 277899999988 89999999986 5999999832 56799999999
Q ss_pred HHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecCCCCCCCCCCCc--ccCChHHHHHHHHHHHHH-
Q 017179 265 MMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVS--EYITPEAFERYRALGMEM- 341 (376)
Q Consensus 265 ~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY~~P~~~~~~v~--~~v~pe~~~~l~~~a~~~- 341 (376)
+.+++ .|+.+...+++.-|++++++.++++++++++++.+.+..|........++. ..++++++..+.+...+.
T Consensus 230 ~~l~~---~g~~v~i~~~l~~g~n~~~~~~l~~~l~~~~~~~i~l~~~~~~~~~~~~l~~~~~~~~e~~~~~~~~l~~~l 306 (342)
T 2yx0_A 230 ELMRD---LPTRTVVRLTLVKGENMHSPEKYAKLILKARPMFVEAKAYMFVGYSRNRLTINNMPSHQDIREFAEALVKHL 306 (342)
T ss_dssp HHHTT---CSSEEEEEEEECTTTTCCCHHHHHHHHHHHCCSEEEEEECC------CCCCGGGSCCHHHHHHHHHHHHTTC
T ss_pred HHHHh---CCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCEEEEEeeeecCCCcccccccCCCCHHHHHHHHHHHHHhc
Confidence 99988 467888888886699999999999999999999998877753211122322 234566666665555443
Q ss_pred -hhhhhccchhH
Q 017179 342 -GFRYVASGPMV 352 (376)
Q Consensus 342 -gf~~~~sgp~v 352 (376)
++.....+|..
T Consensus 307 ~~~~I~~~~~~~ 318 (342)
T 2yx0_A 307 PGYHIEDEYEPS 318 (342)
T ss_dssp TTEEEEEEEGGG
T ss_pred cCCceeeccccc
Confidence 34433334433
No 9
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=99.36 E-value=2.7e-12 Score=123.33 Aligned_cols=203 Identities=12% Similarity=0.157 Sum_probs=123.6
Q ss_pred eeeC-CccCCCCcCCCCCCCC----------CCCCCCchhHHHHHHHHHH---------------------CCCcEEEEE
Q 017179 133 MILG-DTCTRGCRFCNVKTSR----------APPPPDPDEPTNVAEAIAS---------------------WGLDYVVIT 180 (376)
Q Consensus 133 m~i~-d~C~~~C~FC~v~~~r----------~~~~l~~eEi~~~a~al~~---------------------~G~~eIvLT 180 (376)
+.++ ++|+.+|.||..+... ....++++|+++.+....+ ..+++|+|+
T Consensus 55 i~~t~~~Cn~~C~fC~~~~~~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~~~~~~~g~~~v~~~~r~~~~~~~~~i~~s 134 (311)
T 2z2u_A 55 CTPSVIWCQQNCIFCWRVLPRDIGIDISQIKEPKWEEPEVVYEKILAMHKRIIMGYAGVLDRVGEKKFKEALEPKHVAIS 134 (311)
T ss_dssp EESCSSCCSCC----------------CCSCCCCCCCHHHHHHHHHHHHHHHHHGGGGGHHHHCHHHHHHHTSCCEEEEC
T ss_pred eccChhHHhCcCcccCCCCCCcccccccccCccccCCHHHHHHHHHHHHHHHhhccCCCcCcchhhhhhhccCCCEEEEe
Confidence 4457 7999999999866311 1234888998876544321 225789999
Q ss_pred -eeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccch-HHHHHhhcCCC--CC
Q 017179 181 -SVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETV-EELQSAVRDHR--AN 256 (376)
Q Consensus 181 -sg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv-~~l~~~vr~r~--~t 256 (376)
||+.--.+ ++.++++.+++. ++.+.+.+-.. .++.++.| |++.+.+++++. ++++++++ +. .+
T Consensus 135 ~gGEPll~~-----~l~~li~~~~~~--g~~~~l~TNG~--~~~~l~~L---~~~~v~isld~~~~~~~~~i~-~~~~~~ 201 (311)
T 2z2u_A 135 LSGEPTLYP-----YLDELIKIFHKN--GFTTFVVSNGI--LTDVIEKI---EPTQLYISLDAYDLDSYRRIC-GGKKEY 201 (311)
T ss_dssp SSSCGGGST-----THHHHHHHHHHT--TCEEEEEECSC--CHHHHHHC---CCSEEEEECCCSSTTTC-----CCCHHH
T ss_pred CCcCccchh-----hHHHHHHHHHHC--CCcEEEECCCC--CHHHHHhC---CCCEEEEEeecCCHHHHHHHh-CCccch
Confidence 66532112 377888888775 56777666444 24555544 789999999986 58999998 44 67
Q ss_pred HHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecCCCCC--CCCCCCcccCChHHHHHH
Q 017179 257 FKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYMRPS--KRHMPVSEYITPEAFERY 334 (376)
Q Consensus 257 ~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY~~P~--~~~~~v~~~v~pe~~~~l 334 (376)
+++.++.++.+++. | .+...+++.-|+++ |+.+.++++++++++.+.+.+|++-+ ...+.....++++++..+
T Consensus 202 ~~~v~~~i~~l~~~---g-~v~i~~~~~~g~n~-~~~~~~~~~~~~~~~~i~l~~~~p~g~~~~~~~~~~~~~~~e~~~~ 276 (311)
T 2z2u_A 202 WESILNTLDILKEK---K-RTCIRTTLIRGYND-DILKFVELYERADVHFIELKSYMHVGYSQKRLKKEDMLQHDEILKL 276 (311)
T ss_dssp HHHHHHHHHHHTTS---S-SEEEEEEECTTTTC-CGGGTHHHHHHHTCSEEEEEECC------------CCCCHHHHHHH
T ss_pred HHHHHHHHHHHHhc---C-CEEEEEEEECCcch-hHHHHHHHHHHcCCCEEEEEeeEEccccccccccccCCCHHHHHHH
Confidence 99999999999883 5 56666655557777 89999999999999999998786321 111222234566666665
Q ss_pred HHHHHH-HhhhhhccchhHh
Q 017179 335 RALGME-MGFRYVASGPMVR 353 (376)
Q Consensus 335 ~~~a~~-~gf~~~~sgp~vr 353 (376)
.+...+ .|+.+....|..|
T Consensus 277 ~~~l~~~~g~~~~~~~~~~~ 296 (311)
T 2z2u_A 277 AKMLDENSSYKLIDDSEDSR 296 (311)
T ss_dssp HHHHHTSSSEEEEEEEGGGT
T ss_pred HHHHHHhcCceEEeccCcce
Confidence 555444 6776654444433
No 10
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=99.19 E-value=7.7e-10 Score=111.55 Aligned_cols=161 Identities=16% Similarity=0.219 Sum_probs=116.1
Q ss_pred EEeeeCCccCCCCcCCCCCCCCC-C-CCCCchhHHHHHHHHHH-CCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCC
Q 017179 131 TIMILGDTCTRGCRFCNVKTSRA-P-PPPDPDEPTNVAEAIAS-WGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP 207 (376)
Q Consensus 131 t~m~i~d~C~~~C~FC~v~~~r~-~-~~l~~eEi~~~a~al~~-~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p 207 (376)
..+.++++|+.+|+||......+ . ..++.+++.+.++.+.+ .|+++|+||||+.--.++ ..+.++++.+++. +
T Consensus 117 v~l~vT~~Cnl~C~yC~~~~~~~~~~~~ls~eei~~~i~~i~~~~gi~~V~ltGGEPll~~d---~~L~~il~~l~~~-~ 192 (416)
T 2a5h_A 117 VLLLITDMCSMYCRHCTRRRFAGQSDDSMPMERIDKAIDYIRNTPQVRDVLLSGGDALLVSD---ETLEYIIAKLREI-P 192 (416)
T ss_dssp EEEEEESCCSSCCTTCTTTTTTTSSSSBCCHHHHHHHHHHHHTCTTCCEEEEEESCTTSSCH---HHHHHHHHHHHTS-T
T ss_pred EEEecCCCccccCcCCCCcccCCCccCCCCHHHHHHHHHHHHhcCCCcEEEEECCCCCCCCH---HHHHHHHHHHHhc-C
Confidence 34456899999999997765322 2 24899999999999988 799999999997433332 3477888888764 3
Q ss_pred Cc-EEEEec------CCCCCChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEe
Q 017179 208 NM-LIEALV------PDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTS 280 (376)
Q Consensus 208 ~i-~Ie~l~------pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~ 280 (376)
++ .|.+.+ |... +++.++.|+++ +.+..++++... +.+ + ++.++.++.+++ .|+.+...
T Consensus 193 ~v~~i~i~Tng~~~~p~~i-t~e~l~~L~~~--~~v~Isl~~~~~--~ei-----~-~~v~~ai~~L~~---aGi~v~i~ 258 (416)
T 2a5h_A 193 HVEIVRIGSRTPVVLPQRI-TPELVNMLKKY--HPVWLNTHFNHP--NEI-----T-EESTRACQLLAD---AGVPLGNQ 258 (416)
T ss_dssp TCCEEEEECSHHHHCGGGC-CHHHHHHHGGG--CSEEEEECCCSG--GGC-----C-HHHHHHHHHHHH---TTCCEEEE
T ss_pred CccEEEEEecccccccccC-CHHHHHHHHhc--CcEEEEEecCCH--HHH-----h-HHHHHHHHHHHH---cCCEEEEE
Confidence 33 444433 2222 67889999887 666666665321 222 2 888999999998 46766555
Q ss_pred EEE--ecCCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 281 IML--GCGETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 281 imv--GlGET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
.++ |+.++.+++.++++++.+++++...+
T Consensus 259 ~vll~GvNd~~e~l~~l~~~l~~lgv~~~~i 289 (416)
T 2a5h_A 259 SVLLRGVNDCVHVMKELVNKLVKIRVRPYYI 289 (416)
T ss_dssp EECCTTTTCSHHHHHHHHHHHHHTTEEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHcCCceEEE
Confidence 554 88899999999999999999987655
No 11
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=99.09 E-value=1.9e-09 Score=108.42 Aligned_cols=199 Identities=11% Similarity=0.111 Sum_probs=136.6
Q ss_pred eCCccCCCCcCCCCCCCCCCCCCCchhHHHHHHHHHH----------CCCcEEEEEe-eeCCCCCcccHHHHHHHHHHHH
Q 017179 135 LGDTCTRGCRFCNVKTSRAPPPPDPDEPTNVAEAIAS----------WGLDYVVITS-VDRDDLADQGSGHFAQTVRKLK 203 (376)
Q Consensus 135 i~d~C~~~C~FC~v~~~r~~~~l~~eEi~~~a~al~~----------~G~~eIvLTs-g~r~dl~d~g~~~~~elvr~Ik 203 (376)
.+.+|+.+|.||.-........++++||++.+..+.. .+++.|+|+| |+. -+. .+.+.++++.++
T Consensus 121 sq~GCnl~C~fC~tg~~g~~r~Lt~eEIv~qv~~~~~~~~~~g~~gg~~i~~Ivf~GgGEP-Lln---~d~v~~~i~~lk 196 (404)
T 3rfa_A 121 SQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEP-LLN---LNNVVPAMEIML 196 (404)
T ss_dssp CEEECSSCCTTCGGGTTCEEEECCHHHHHHHHHHHHHHHCCHHHHSSCSCSEEEECSSSCG-GGC---HHHHHHHHHHHH
T ss_pred eCCCCCCcCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHhhhcccccCCCccEEEEeCCCCc-ccC---HHHHHHHHHHHH
Confidence 3579999999998664321124899999988766543 2478999995 542 111 456788888888
Q ss_pred hhCCCc-----EEEEecCCCCCChHHHHHHHHcCcccccccccchH-HHHHhhcC--CCCCHHHHHHHHHHHHHhCCC--
Q 017179 204 ELKPNM-----LIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVE-ELQSAVRD--HRANFKQSLDVLMMAKDYVPA-- 273 (376)
Q Consensus 204 ~~~p~i-----~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~-~l~~~vr~--r~~t~e~~L~vl~~ak~~~p~-- 273 (376)
+.. ++ .|.+.+-.+ .+.++.|.+.+...++..+.+.+ ++++++.| ++++.++.++.++...+..+.
T Consensus 197 ~~~-Gl~~s~r~itlsTnG~---~p~i~~L~~~~d~~LaiSLka~d~e~~~~i~pv~~~~~le~vl~ai~~~~~~~g~~~ 272 (404)
T 3rfa_A 197 DDF-GFGLSKRRVTLSTSGV---VPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQ 272 (404)
T ss_dssp STT-TTCCCGGGEEEEESCC---HHHHHHHHHHCCCEEEEECCCSSHHHHHHHSGGGGTSCHHHHHHHHHHHHHHCTTTT
T ss_pred hhc-CcCcCCCceEEECCCc---HHHHHHHHHhhcceEEecccCCCHHHHHHhcCCccCCCHHHHHHHHHHHHHHhCCCc
Confidence 642 34 566555333 35678888875445667788765 88888874 368899999999655432211
Q ss_pred -CceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhh
Q 017179 274 -GTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRY 345 (376)
Q Consensus 274 -Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~ 345 (376)
.+.+.+-+|=|+.++++|+.+..++++++++ .|.+-+|. |. ....+ ...++++.+.++++..+.|+..
T Consensus 273 ~~V~ie~vLI~GvNDs~e~~~~La~ll~~l~~-~VnLIpyn-P~-~~~~~-~~ps~e~i~~f~~iL~~~Gi~v 341 (404)
T 3rfa_A 273 GRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC-KINLIPWN-PF-PGAPY-GRSSNSRIDRFSKVLMSYGFTT 341 (404)
T ss_dssp TCEEEEEEEBTTTTCSHHHHHHHHHHTTTSCE-EEEEEECC-CC-TTCCC-CBCCHHHHHHHHHHHHHTTCEE
T ss_pred ccEEEEEEEecCCCCCHHHHHHHHHHHHcCCC-cEEEEecc-CC-CCCCC-CCCCHHHHHHHHHHHHHcCCcE
Confidence 2455666666889999999999999999875 45555553 42 12222 2356788999999999888755
No 12
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=98.37 E-value=3.9e-06 Score=74.01 Aligned_cols=161 Identities=7% Similarity=0.074 Sum_probs=112.3
Q ss_pred cEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccch-HHHHHhhcCC
Q 017179 175 DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETV-EELQSAVRDH 253 (376)
Q Consensus 175 ~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv-~~l~~~vr~r 253 (376)
..|+||||+.--. .+.+.++++.+++. ++.+.+.+--+. +++.++.|.+. +|.+...++.. ++.+.++++
T Consensus 5 ~~v~~tGGEPll~----~~~~~~l~~~~~~~--g~~~~l~TNG~l-~~~~~~~l~~~-~d~v~isld~~~~~~~~~~~g- 75 (182)
T 3can_A 5 GGVTFCGGEPLLH----PEFLIDILKRCGQQ--GIHRAVDTTLLA-RKETVDEVMRN-CELLLIDLKSMDSTVHQTFCD- 75 (182)
T ss_dssp CCEEECSSTGGGS----HHHHHHHHHHHHHT--TCCEEEECTTCC-CHHHHHHHHHT-CSEEEEECCCSCHHHHHHHHS-
T ss_pred CEEEEEcccccCC----HHHHHHHHHHHHHC--CCcEEEECCCCC-CHHHHHHHHhh-CCEEEEECCCCCHHHHHHHhC-
Confidence 5689999863211 22235888888874 467776665443 57888888887 88888889986 588999883
Q ss_pred CCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHc-CC-cEEEeecCCCCCCCC--------CCCc
Q 017179 254 RANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAA-GV-DVMTFGQYMRPSKRH--------MPVS 323 (376)
Q Consensus 254 ~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel-~v-d~v~~~qY~~P~~~~--------~~v~ 323 (376)
.+++..++.++.+++.... +.+.+.++-|+.++.+++.+.+++++++ ++ ..+.+.+|. |.... .++.
T Consensus 76 -~~~~~i~~~i~~l~~~g~~-v~i~~~v~~~~n~n~~~~~~~~~~~~~~~g~~~~~~l~~~~-p~g~~~~~~l~~~y~~~ 152 (182)
T 3can_A 76 -VPNELILKNIRRVAEADFP-YYIRIPLIEGVNADEKNIKLSAEFLASLPRHPEIINLLPYH-DIGKGKHAKLGSIYNPK 152 (182)
T ss_dssp -SCSHHHHHHHHHHHHTTCC-EEEEEEECBTTTCSHHHHHHHHHHHHHSSSCCSEEEEEECC-C----------------
T ss_pred -CCHHHHHHHHHHHHhCCCe-EEEEEEEECCCCCCHHHHHHHHHHHHhCcCccceEEEecCc-ccCHHHHHHhCCcCccc
Confidence 4579999999999884222 3455555666778999999999999999 98 888886665 42111 1122
Q ss_pred c--cCChHH--HHHHHHHHHHHhhhhhc
Q 017179 324 E--YITPEA--FERYRALGMEMGFRYVA 347 (376)
Q Consensus 324 ~--~v~pe~--~~~l~~~a~~~gf~~~~ 347 (376)
+ .+++++ .+.+.+++.+.|+.++.
T Consensus 153 ~~~~~~~e~~~l~~~~~~~~~~g~~~~i 180 (182)
T 3can_A 153 GYKMQTPSEEVQQQCIQILTDYGLKATI 180 (182)
T ss_dssp --CCBCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHcCCceEe
Confidence 2 234566 88999999998887654
No 13
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=97.85 E-value=6.9e-05 Score=71.93 Aligned_cols=145 Identities=14% Similarity=0.203 Sum_probs=106.7
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCC-CCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcc
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDD-LADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLN 234 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~d-l~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld 234 (376)
.++.+|.+++++++.+.|+++|-++++..+. .|- .....++++.+++ .|++.+.++.+ +.+.++...++|++
T Consensus 23 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~--~~d~~~~~~~~~~-~~~~~~~~l~~----~~~~i~~a~~ag~~ 95 (298)
T 2cw6_A 23 IVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQ--MGDHTEVLKGIQK-FPGINYPVLTP----NLKGFEAAVAAGAK 95 (298)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGG--GTTHHHHHHHSCC-CTTCBCCEECC----SHHHHHHHHHTTCS
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccc--cCCHHHHHHHHhh-CCCCEEEEEcC----CHHhHHHHHHCCCC
Confidence 4889999999999999999999998865432 231 1123456677765 46677666664 56789999999999
Q ss_pred cccccccchH-HHHHhhc-CCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-C-----CHHHHHHHHHHHHHcCCcE
Q 017179 235 VFAHNIETVE-ELQSAVR-DHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-E-----TPDQVVSTMEKVRAAGVDV 306 (376)
Q Consensus 235 ~i~h~lEtv~-~l~~~vr-~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlG-E-----T~ee~~e~L~~Lrel~vd~ 306 (376)
.+....-+++ .....++ ++...++...+.++.+++ .|+.+..+++.-+| | +.+++.+.++.+.+.|++.
T Consensus 96 ~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~---~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~ 172 (298)
T 2cw6_A 96 EVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQS---ANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYE 172 (298)
T ss_dssp EEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHH---TTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSE
T ss_pred EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH---CCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCE
Confidence 9988776666 4445554 112234555666777887 57888888886653 2 6889999999999999999
Q ss_pred EEee
Q 017179 307 MTFG 310 (376)
Q Consensus 307 v~~~ 310 (376)
+.+.
T Consensus 173 i~l~ 176 (298)
T 2cw6_A 173 ISLG 176 (298)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9885
No 14
>4fhd_A Spore photoproduct lyase; partial TIM-barrel, DNA repair, damaged DNA; HET: EEM 0TT; 2.00A {Geobacillus thermodenitrificans} PDB: 4fhc_A* 4fhg_A* 4fhe_A* 4fhf_A*
Probab=97.72 E-value=6e-05 Score=74.77 Aligned_cols=164 Identities=11% Similarity=0.100 Sum_probs=96.0
Q ss_pred EEeeeCCccCCCCcCCCCCCC--CCCC---CCCchhHHHHHHH-HHHCCCc-EEEEEeeeCCCCCc-ccHHHHHHHHHHH
Q 017179 131 TIMILGDTCTRGCRFCNVKTS--RAPP---PPDPDEPTNVAEA-IASWGLD-YVVITSVDRDDLAD-QGSGHFAQTVRKL 202 (376)
Q Consensus 131 t~m~i~d~C~~~C~FC~v~~~--r~~~---~l~~eEi~~~a~a-l~~~G~~-eIvLTsg~r~dl~d-~g~~~~~elvr~I 202 (376)
+.+....||..+|.||..... ..+. ..+.+|+++.++. +.+.+-+ .++-+|.+-|-++- .-....-++|+.+
T Consensus 109 Y~ln~y~GC~~~C~YCYl~~~~~~~~~I~v~vN~~eiL~~l~~~l~~~~~~~~~i~~g~~TDpyp~E~~~~ltr~~le~l 188 (368)
T 4fhd_A 109 YAIPLATGCMGHCHYCYLQTTLGSKPYIRVYVNLDDIFAQAQKYINERAPEITRFEAACTSDIVGIDHLTHSLKKAIEFI 188 (368)
T ss_dssp EECCSEEBCSCCCTTCTHHHHTTTCCSEEEECCHHHHHHHHHHHHHHHTTSCEEEESCSSBCHHHHHTTTCHHHHHHHHH
T ss_pred eeeCCccCCCCCCceEeccccCCCCCeEEEecCHHHHHHHHHHHHhhcCCCceEEEEEcCCCcchhhHHHhHHHHHHHHH
Confidence 345567899999999976632 1221 2678888887654 4443333 34445554443321 0011233455555
Q ss_pred HhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEE
Q 017179 203 KELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIM 282 (376)
Q Consensus 203 k~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~im 282 (376)
.+ +++..+++.+=.- +.+.|..+...|.-.+...+-+ +++.+.+-|+..+.+++|++++.+++ .|++|...+.
T Consensus 189 ~~-~~~~~v~i~TKs~--lid~L~~l~~~~~v~V~~Sitt-~~l~r~~EP~aps~~~RL~Ai~~l~~---aGipv~v~ia 261 (368)
T 4fhd_A 189 GA-TDYGRLRFVTKYE--HVDHLLDARHNGKTRFRFSINS-RYVINHFEPGTSSFDGRLAAARKVAG---AGYKLGFVVA 261 (368)
T ss_dssp HH-CSSEEEEEEESCC--CCGGGTTCCCTTCEEEEEEECC-HHHHHHHCTTSCCHHHHHHHHHHHHH---TTCEEEEEEE
T ss_pred Hh-CCCceEEEEeCCc--CHHHHHhcCcCCceEEEEEEcC-HHHHHHcCCCCCCHHHHHHHHHHHHH---CCCeEEEEEe
Confidence 44 4556677766422 1122333322232233334433 68888888888899999999999999 6876555544
Q ss_pred Eec-CCCH-HHHHHHHHHHHH
Q 017179 283 LGC-GETP-DQVVSTMEKVRA 301 (376)
Q Consensus 283 vGl-GET~-ee~~e~L~~Lre 301 (376)
==+ ++++ ++..+.++.|.+
T Consensus 262 PIiP~~~~~e~y~~lle~l~~ 282 (368)
T 4fhd_A 262 PIYRHEGWERGYFELFQELAR 282 (368)
T ss_dssp EECCCTTHHHHHHHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHHHHHHH
Confidence 335 7877 466677775554
No 15
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=97.67 E-value=0.00046 Score=66.30 Aligned_cols=142 Identities=20% Similarity=0.280 Sum_probs=104.3
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCC-CCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcc
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDD-LADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLN 234 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~d-l~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld 234 (376)
.++.++.+++++++.+.|+++|-+.+...+. .+.. ....++++.+.+. +++.+.++.+ +.+.++...++|.+
T Consensus 26 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~--~d~~~~~~~~~~~-~~~~~~~l~~----~~~~i~~a~~aG~~ 98 (302)
T 2ftp_A 26 PIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQM--AGSAEVFAGIRQR-PGVTYAALAP----NLKGFEAALESGVK 98 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGG--TTHHHHHHHSCCC-TTSEEEEECC----SHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccc--cCHHHHHHHhhhc-CCCEEEEEeC----CHHHHHHHHhCCcC
Confidence 4889999999999999999999998754332 3321 1244566777653 6788887775 56889999999999
Q ss_pred cccccccchH-HHHHhhcCCCCCHHHH----HHHHHHHHHhCCCCceEEEeEEEecC-C-----CHHHHHHHHHHHHHcC
Q 017179 235 VFAHNIETVE-ELQSAVRDHRANFKQS----LDVLMMAKDYVPAGTLTKTSIMLGCG-E-----TPDQVVSTMEKVRAAG 303 (376)
Q Consensus 235 ~i~h~lEtv~-~l~~~vr~r~~t~e~~----L~vl~~ak~~~p~Gi~tkt~imvGlG-E-----T~ee~~e~L~~Lrel~ 303 (376)
++....-+++ .....++ .++++. .++++.+++ .|+.+...++.-+| | +.+++.+.++.+.+.|
T Consensus 99 ~v~i~~~~s~~~~~~~~~---~s~ee~l~~~~~~v~~a~~---~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G 172 (302)
T 2ftp_A 99 EVAVFAAASEAFSQRNIN---CSIKDSLERFVPVLEAARQ---HQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMG 172 (302)
T ss_dssp EEEEEEESCHHHHHHHHS---SCHHHHHHHHHHHHHHHHH---TTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTT
T ss_pred EEEEEEecCHHHHHHHhC---CCHHHHHHHHHHHHHHHHH---CCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcC
Confidence 8877655555 4445554 345554 555677777 47888888776664 3 6788999999999999
Q ss_pred CcEEEee
Q 017179 304 VDVMTFG 310 (376)
Q Consensus 304 vd~v~~~ 310 (376)
+|.+.+.
T Consensus 173 ~d~i~l~ 179 (302)
T 2ftp_A 173 CYEVSLG 179 (302)
T ss_dssp CSEEEEE
T ss_pred CCEEEEe
Confidence 9999885
No 16
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=97.64 E-value=0.00066 Score=65.60 Aligned_cols=142 Identities=18% Similarity=0.209 Sum_probs=106.1
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCC-CCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcc
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDD-LADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLN 234 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~d-l~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld 234 (376)
.++.++.+++++++.+.|+++|-+.+...+. .+. .....++++.+++. +++.+.++.+ +.+.++...++|++
T Consensus 24 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~--~~d~~~~~~~~~~~-~~~~~~~l~~----~~~~i~~a~~~g~~ 96 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLSYIEITSFVHPKWIPA--LRDAIDVAKGIDRE-KGVTYAALVP----NQRGLENALEGGIN 96 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGG--GTTHHHHHHHSCCC-TTCEEEEECC----SHHHHHHHHHHTCS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccc--cCCHHHHHHHhhhc-CCCeEEEEeC----CHHhHHHHHhCCcC
Confidence 4889999999999999999999998865432 221 11123566666554 7888888886 46779999999999
Q ss_pred cccccccchH-HHHHhhcCCCCCHHHH----HHHHHHHHHhCCCCceEEEeEEEecC------CCHHHHHHHHHHHHHcC
Q 017179 235 VFAHNIETVE-ELQSAVRDHRANFKQS----LDVLMMAKDYVPAGTLTKTSIMLGCG------ETPDQVVSTMEKVRAAG 303 (376)
Q Consensus 235 ~i~h~lEtv~-~l~~~vr~r~~t~e~~----L~vl~~ak~~~p~Gi~tkt~imvGlG------ET~ee~~e~L~~Lrel~ 303 (376)
.+...+-+++ -....++ .+.++. .++++.+++ .|+.+..+++.-|| -+.+.+.+.++.+.+.|
T Consensus 97 ~v~i~~~~sd~~~~~~l~---~s~~e~l~~~~~~v~~ak~---~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G 170 (307)
T 1ydo_A 97 EACVFMSASETHNRKNIN---KSTSESLHILKQVNNDAQK---ANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFG 170 (307)
T ss_dssp EEEEEEESSHHHHHTTTC---SCHHHHHHHHHHHHHHHHH---TTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHT
T ss_pred EEEEEeecCHHHHHHHhC---CCHHHHHHHHHHHHHHHHH---CCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcC
Confidence 9888776666 3333443 455554 566777777 57888888888774 36789999999999999
Q ss_pred CcEEEee
Q 017179 304 VDVMTFG 310 (376)
Q Consensus 304 vd~v~~~ 310 (376)
++.|.+.
T Consensus 171 a~~i~l~ 177 (307)
T 1ydo_A 171 ISELSLG 177 (307)
T ss_dssp CSCEEEE
T ss_pred CCEEEEc
Confidence 9999885
No 17
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=97.64 E-value=0.00044 Score=66.03 Aligned_cols=143 Identities=16% Similarity=0.161 Sum_probs=103.1
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCC-CcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcc
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDL-ADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLN 234 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl-~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld 234 (376)
.++.++.+++++++.+.|++.|.+++...+.+ |. .....+.++.+++. +++.+.++.+ +.+.++...++|.+
T Consensus 22 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~--~~~~~e~~~~i~~~-~~~~v~~l~~----n~~~i~~a~~~G~~ 94 (295)
T 1ydn_A 22 FVPTADKIALINRLSDCGYARIEATSFVSPKWVPQ--LADSREVMAGIRRA-DGVRYSVLVP----NMKGYEAAAAAHAD 94 (295)
T ss_dssp CCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGG--GTTHHHHHHHSCCC-SSSEEEEECS----SHHHHHHHHHTTCS
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEccCcCcccccc--ccCHHHHHHHHHhC-CCCEEEEEeC----CHHHHHHHHHCCCC
Confidence 48899999999999999999999987543322 21 11245778888664 6788877775 56889999999999
Q ss_pred cccccccchHHHHHhhcCCCCCHHHH----HHHHHHHHHhCCCCceEEEeEEEec------CCCHHHHHHHHHHHHHcCC
Q 017179 235 VFAHNIETVEELQSAVRDHRANFKQS----LDVLMMAKDYVPAGTLTKTSIMLGC------GETPDQVVSTMEKVRAAGV 304 (376)
Q Consensus 235 ~i~h~lEtv~~l~~~vr~r~~t~e~~----L~vl~~ak~~~p~Gi~tkt~imvGl------GET~ee~~e~L~~Lrel~v 304 (376)
.+...+-+++...+. + -+.++++. .++++.|++ .|+.+...++.-+ --+.+++.+.++.+.+.|+
T Consensus 95 ~V~i~~~~S~~h~~~-~-~~~~~~e~~~~~~~~v~~a~~---~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~ 169 (295)
T 1ydn_A 95 EIAVFISASEGFSKA-N-INCTIAESIERLSPVIGAAIN---DGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGC 169 (295)
T ss_dssp EEEEEEESCHHHHHH-H-TSSCHHHHHHHHHHHHHHHHH---TTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTC
T ss_pred EEEEEEecCHHHHHH-H-cCCCHHHHHHHHHHHHHHHHH---cCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCC
Confidence 987766566533222 1 12345544 455788888 5788876666433 2378899999999999999
Q ss_pred cEEEee
Q 017179 305 DVMTFG 310 (376)
Q Consensus 305 d~v~~~ 310 (376)
|.+.+.
T Consensus 170 d~i~l~ 175 (295)
T 1ydn_A 170 HEVSLG 175 (295)
T ss_dssp SEEEEE
T ss_pred CEEEec
Confidence 999886
No 18
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=97.05 E-value=0.003 Score=61.71 Aligned_cols=138 Identities=21% Similarity=0.211 Sum_probs=99.7
Q ss_pred CCCchhHHHHHH-HHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHh------hCCCcEEEEecCCCCCChHHHHHH
Q 017179 156 PPDPDEPTNVAE-AIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKE------LKPNMLIEALVPDFRGNNGCVREV 228 (376)
Q Consensus 156 ~l~~eEi~~~a~-al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~------~~p~i~Ie~l~pd~~g~~e~l~~L 228 (376)
.++.++.+++++ ++.+.|+++|-+.+.... ++ . .+.|+++++ ..|++.+.++.+.. +.++..
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~--~~-~----~~~v~~~~~~~~~~~~~~~~~i~~l~~~~----~~i~~a 105 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARVS--KG-E----LETVQKIMEWAATEQLTERIEILGFVDGN----KTVDWI 105 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTSC--TT-H----HHHHHHHHHHHHHTTCGGGEEEEEESSTT----HHHHHH
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCCC--hh-H----HHHHHHHHhhhhhhccCCCCeEEEEccch----hhHHHH
Confidence 488999999999 999999999998775421 11 1 234445544 34677888888743 368889
Q ss_pred HHcCcccccccccchH-HHHHhhcCCCCCHHHHH----HHHHHHHHhCCCCceEEEeEEE---ecCCCHHHHHHHHHHHH
Q 017179 229 AKSGLNVFAHNIETVE-ELQSAVRDHRANFKQSL----DVLMMAKDYVPAGTLTKTSIML---GCGETPDQVVSTMEKVR 300 (376)
Q Consensus 229 ~~aGld~i~h~lEtv~-~l~~~vr~r~~t~e~~L----~vl~~ak~~~p~Gi~tkt~imv---GlGET~ee~~e~L~~Lr 300 (376)
.++|+|.+...+-+++ .....++ .+.++.+ ++++.+++ .|+.+..+++- +.--+.+.+.+.++.+.
T Consensus 106 ~~~g~~~v~i~~~~s~~~~~~~~~---~s~~e~l~~~~~~v~~ak~---~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (337)
T 3ble_A 106 KDSGAKVLNLLTKGSLHHLEKQLG---KTPKEFFTDVSFVIEYAIK---SGLKINVYLEDWSNGFRNSPDYVKSLVEHLS 179 (337)
T ss_dssp HHHTCCEEEEEEECSHHHHHHHTC---CCHHHHHHHHHHHHHHHHH---TTCEEEEEEETHHHHHHHCHHHHHHHHHHHH
T ss_pred HHCCCCEEEEEEecCHHHHHHHhC---CCHHHHHHHHHHHHHHHHH---CCCEEEEEEEECCCCCcCCHHHHHHHHHHHH
Confidence 9999999988777777 5555554 3555544 55666677 47777766654 33345788999999999
Q ss_pred HcCCcEEEee
Q 017179 301 AAGVDVMTFG 310 (376)
Q Consensus 301 el~vd~v~~~ 310 (376)
+.|++.|.+.
T Consensus 180 ~~Ga~~i~l~ 189 (337)
T 3ble_A 180 KEHIERIFLP 189 (337)
T ss_dssp TSCCSEEEEE
T ss_pred HcCCCEEEEe
Confidence 9999999885
No 19
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=96.69 E-value=0.025 Score=54.14 Aligned_cols=142 Identities=11% Similarity=0.111 Sum_probs=96.4
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCC-ChHHHHHHHHcCcc
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG-NNGCVREVAKSGLN 234 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g-~~e~l~~L~~aGld 234 (376)
.++.++-+++++.+.+.|+++|-+.+... . ... .+.++++.+..+++.+.++.+.... -+..++.++.+|.+
T Consensus 23 ~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~---~---~~d-~e~v~~i~~~~~~~~i~~l~~~~~~di~~a~~~~~~ag~~ 95 (293)
T 3ewb_X 23 NFDVKEKIQIALQLEKLGIDVIEAGFPIS---S---PGD-FECVKAIAKAIKHCSVTGLARCVEGDIDRAEEALKDAVSP 95 (293)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEECGGG---C---HHH-HHHHHHHHHHCCSSEEEEEEESSHHHHHHHHHHHTTCSSE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCC---C---ccH-HHHHHHHHHhcCCCEEEEEecCCHHHHHHHHHHHhhcCCC
Confidence 48999999999999999999998876321 1 112 2346777777788899888863210 12233444457988
Q ss_pred cccccccchH-HHHHhhcCCCCCHHHHHHHH----HHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 235 VFAHNIETVE-ELQSAVRDHRANFKQSLDVL----MMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 235 ~i~h~lEtv~-~l~~~vr~r~~t~e~~L~vl----~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
.+...+-+++ .....++ .+.++.++.+ +.+++ .|+.+.-++.-+.--+.+.+.+.++.+.+.|++.|.+
T Consensus 96 ~v~i~~~~Sd~~~~~nl~---~s~~e~l~~~~~~v~~a~~---~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l 169 (293)
T 3ewb_X 96 QIHIFLATSDVHMEYKLK---MSRAEVLASIKHHISYARQ---KFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINI 169 (293)
T ss_dssp EEEEEEECSHHHHHHTTC---CCHHHHHHHHHHHHHHHHT---TCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEEecCcHHHHHHHhC---CCHHHHHHHHHHHHHHHHh---CCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 8887776766 4444443 5667665554 55565 4666665555433456677889999999999999988
Q ss_pred e
Q 017179 310 G 310 (376)
Q Consensus 310 ~ 310 (376)
.
T Consensus 170 ~ 170 (293)
T 3ewb_X 170 P 170 (293)
T ss_dssp E
T ss_pred c
Confidence 5
No 20
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=96.67 E-value=0.025 Score=54.93 Aligned_cols=142 Identities=15% Similarity=0.158 Sum_probs=96.6
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHH----HHHHc
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVR----EVAKS 231 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~----~L~~a 231 (376)
.++.++-+++++.+.+.|+++|-+.+ +... ...+ +.+++|.+..+++.+.++.+- +.+.++ .+..+
T Consensus 24 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~---p~~~---~~d~-e~v~~i~~~~~~~~i~~l~r~---~~~~i~~a~~al~~a 93 (325)
T 3eeg_A 24 QLNTEEKIIVAKALDELGVDVIEAGF---PVSS---PGDF-NSVVEITKAVTRPTICALTRA---KEADINIAGEALRFA 93 (325)
T ss_dssp -CCTTHHHHHHHHHHHHTCSEEEEEC---TTSC---HHHH-HHHHHHHHHCCSSEEEEECCS---CHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeC---CCCC---HhHH-HHHHHHHHhCCCCEEEEeecC---CHHHHHHHHHhhccc
Confidence 48999999999999999999998864 2211 1223 456777777788888888742 334444 44445
Q ss_pred CcccccccccchH-HHHHhhc-CCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 232 GLNVFAHNIETVE-ELQSAVR-DHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 232 Gld~i~h~lEtv~-~l~~~vr-~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
|.+.+...+-+++ .....++ ++....+...++++.+++ .|+.+.-+...+.--+.+.+.+.++.+.+.|++.|.+
T Consensus 94 g~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~---~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l 170 (325)
T 3eeg_A 94 KRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKK---VVHEVEFFCEDAGRADQAFLARMVEAVIEAGADVVNI 170 (325)
T ss_dssp SSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHT---TSSEEEEEEETGGGSCHHHHHHHHHHHHHHTCSEEEC
T ss_pred CCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHH---CCCEEEEEccccccchHHHHHHHHHHHHhcCCCEEEe
Confidence 9998887766666 3333343 234556677778888888 4676655555444456677789999999999999887
Q ss_pred e
Q 017179 310 G 310 (376)
Q Consensus 310 ~ 310 (376)
.
T Consensus 171 ~ 171 (325)
T 3eeg_A 171 P 171 (325)
T ss_dssp C
T ss_pred c
Confidence 3
No 21
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=96.49 E-value=0.012 Score=57.56 Aligned_cols=137 Identities=12% Similarity=0.135 Sum_probs=90.4
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEE-----eeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEe-cCCCCCChHHHHHHH
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVIT-----SVDRDDLADQGSGHFAQTVRKLKELKPNMLIEAL-VPDFRGNNGCVREVA 229 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLT-----sg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l-~pd~~g~~e~l~~L~ 229 (376)
.++.++.+++++++.+.|+++|=+. ++..++.. .....-.+.++++++..|++.+.++ .|.. ++.+.++...
T Consensus 26 ~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g-~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~-~~~~~i~~a~ 103 (345)
T 1nvm_A 26 QYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYG-FGRHTDLEYIEAVAGEISHAQIATLLLPGI-GSVHDLKNAY 103 (345)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTB-CCSSCHHHHHHHHHTTCSSSEEEEEECBTT-BCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccc-CCCCCHHHHHHHHHhhCCCCEEEEEecCCc-ccHHHHHHHH
Confidence 4899999999999999999999985 22211110 0011134678888777788888887 6643 3678899999
Q ss_pred HcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 230 KSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 230 ~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
++|+|.+....-.. ..+...+.++.+++. |+.+...++-...-+++.+.+.++.+.+.|++.|.+
T Consensus 104 ~aGvd~v~I~~~~s------------~~~~~~~~i~~ak~~---G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l 168 (345)
T 1nvm_A 104 QAGARVVRVATHCT------------EADVSKQHIEYARNL---GMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYM 168 (345)
T ss_dssp HHTCCEEEEEEETT------------CGGGGHHHHHHHHHH---TCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred hCCcCEEEEEEecc------------HHHHHHHHHHHHHHC---CCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 99999876542211 113344556666663 555555555455556667777777777777777666
No 22
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=96.18 E-value=0.054 Score=54.55 Aligned_cols=142 Identities=18% Similarity=0.196 Sum_probs=96.4
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccc
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNV 235 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~ 235 (376)
.++.++-+++++.|.+.|+++|-+.+ +... ..-.+.++.|.+......+-.+. +.+.+.++...++|++.
T Consensus 57 ~~s~eeKl~Ia~~L~~~Gv~~IEvG~---P~as----p~d~~~~~~i~~~~~~~~v~~~~---r~~~~di~~A~~aG~~~ 126 (423)
T 3ivs_A 57 FFDTEKKIQIAKALDNFGVDYIELTS---PVAS----EQSRQDCEAICKLGLKCKILTHI---RCHMDDARVAVETGVDG 126 (423)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECC---TTSC----HHHHHHHHHHHTSCCSSEEEEEE---ESCHHHHHHHHHTTCSE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEee---cccC----HHHHHHHHHHHhcCCCCEEEEee---ccChhhHHHHHHcCCCE
Confidence 58999999999999999999998865 2111 12345566666543233332211 12567789999999999
Q ss_pred ccccccchHHHHH-hhc-CCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 236 FAHNIETVEELQS-AVR-DHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 236 i~h~lEtv~~l~~-~vr-~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
+...+-+++-..+ .++ .+....+...++++.|++ .|+.+.-++.-++.-+.+.+++.++.+.+.|++.|.+.
T Consensus 127 V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~---~G~~V~~~~eda~r~d~~~~~~v~~~~~~~Ga~~i~l~ 200 (423)
T 3ivs_A 127 VDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKS---KGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIA 200 (423)
T ss_dssp EEEEEEC-------------CHHHHHHHHHHHHHHT---TTCEEEEEEESGGGSCHHHHHHHHHHHHHHCCSEEEEE
T ss_pred EEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHH---CCCEEEEEEccCcCCCHHHHHHHHHHHHHhCCCccccC
Confidence 8887777763222 222 112224566678888888 47888888887888889999999999999999998884
No 23
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=95.86 E-value=0.059 Score=53.25 Aligned_cols=139 Identities=14% Similarity=0.122 Sum_probs=96.3
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHH----HHHHHc
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCV----REVAKS 231 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l----~~L~~a 231 (376)
.++.++-+++++++.+.|+++|-+.+- ... ... .+.|+++.+..++..+.++.+- +.+.+ +.++.+
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p---~~~---~~d-~e~v~~i~~~~~~~~i~~l~r~---~~~di~~a~~al~~a 99 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGFA---AAS---PGD-FEAVNAIAKTITKSTVCSLSRA---IERDIRQAGEAVAPA 99 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEEG---GGC---HHH-HHHHHHHHTTCSSSEEEEEEES---SHHHHHHHHHHHTTS
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeCC---CCC---HHH-HHHHHHHHHhCCCCeEEEEecC---CHHHHHHHHHHHhhC
Confidence 489999999999999999999987652 111 111 3456666666678888887742 33334 444559
Q ss_pred CcccccccccchH-HHHHhhcCCCCCHHHHHHHH----HHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcE
Q 017179 232 GLNVFAHNIETVE-ELQSAVRDHRANFKQSLDVL----MMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDV 306 (376)
Q Consensus 232 Gld~i~h~lEtv~-~l~~~vr~r~~t~e~~L~vl----~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~ 306 (376)
|.+.+...+-+++ .....++ .+.++.++.+ +.|++ .|..+.-+...+.--+.+.+.+.++.+.+.|++.
T Consensus 100 g~~~v~if~~~Sd~h~~~~l~---~s~~e~l~~~~~~v~~a~~---~g~~v~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~ 173 (370)
T 3rmj_A 100 PKKRIHTFIATSPIHMEYKLK---MKPKQVIEAAVKAVKIARE---YTDDVEFSCEDALRSEIDFLAEICGAVIEAGATT 173 (370)
T ss_dssp SSEEEEEEEECSHHHHHHTTC---CCHHHHHHHHHHHHHHHTT---TCSCEEEEEETGGGSCHHHHHHHHHHHHHHTCCE
T ss_pred CCCEEEEEecCcHHHHHHHhC---CCHHHHHHHHHHHHHHHHH---cCCEEEEecCCCCccCHHHHHHHHHHHHHcCCCE
Confidence 9999988777777 4444554 5677776664 55555 3555554454444556777889999999999999
Q ss_pred EEee
Q 017179 307 MTFG 310 (376)
Q Consensus 307 v~~~ 310 (376)
|.+.
T Consensus 174 i~l~ 177 (370)
T 3rmj_A 174 INIP 177 (370)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9884
No 24
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=95.71 E-value=0.072 Score=55.20 Aligned_cols=135 Identities=17% Similarity=0.179 Sum_probs=94.3
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeC-----CC-CCcccHHHHHHHHHHHHhhCCCcEEEEec--CCCCC-------
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDR-----DD-LADQGSGHFAQTVRKLKELKPNMLIEALV--PDFRG------- 220 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r-----~d-l~d~g~~~~~elvr~Ik~~~p~i~Ie~l~--pd~~g------- 220 (376)
.++.++.+++++.+.+.|+++|-+.++-. .- .++ =.+.++.|++..|++.+.++. +...|
T Consensus 43 ~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d-----~~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypdd 117 (539)
T 1rqb_A 43 RMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNED-----PWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDE 117 (539)
T ss_dssp CCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCC-----HHHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCC-----HHHHHHHHHHhCCCCEEEEEeccccccCcccCccc
Confidence 47899999999999999999999987521 00 111 135667777667888888877 22222
Q ss_pred -ChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeE--EEecCCCHHHHHHHHH
Q 017179 221 -NNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSI--MLGCGETPDQVVSTME 297 (376)
Q Consensus 221 -~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~i--mvGlGET~ee~~e~L~ 297 (376)
....++...++|+|++....-+.+ .+...+.++.+++ .|..+...+ ..|..-+.+.+++.++
T Consensus 118 v~~~~ve~a~~aGvd~vrIf~s~sd------------~~ni~~~i~~ak~---~G~~v~~~i~~~~~~~~~~e~~~~~a~ 182 (539)
T 1rqb_A 118 VVDRFVDKSAENGMDVFRVFDAMND------------PRNMAHAMAAVKK---AGKHAQGTICYTISPVHTVEGYVKLAG 182 (539)
T ss_dssp HHHHHHHHHHHTTCCEEEECCTTCC------------THHHHHHHHHHHH---TTCEEEEEEECCCSTTCCHHHHHHHHH
T ss_pred ccHHHHHHHHhCCCCEEEEEEehhH------------HHHHHHHHHHHHH---CCCeEEEEEEeeeCCCCCHHHHHHHHH
Confidence 245678889999998876432222 2445677888888 466665455 4455668888889999
Q ss_pred HHHHcCCcEEEee
Q 017179 298 KVRAAGVDVMTFG 310 (376)
Q Consensus 298 ~Lrel~vd~v~~~ 310 (376)
.+.+.|++.|.|.
T Consensus 183 ~l~~~Gad~I~L~ 195 (539)
T 1rqb_A 183 QLLDMGADSIALK 195 (539)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHHHcCCCEEEeC
Confidence 9999999888774
No 25
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=95.61 E-value=0.1 Score=53.09 Aligned_cols=135 Identities=18% Similarity=0.173 Sum_probs=93.3
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCC-----C-CCcccHHHHHHHHHHHHhhCCCcEEEEec--CCCCC-------
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRD-----D-LADQGSGHFAQTVRKLKELKPNMLIEALV--PDFRG------- 220 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~-----d-l~d~g~~~~~elvr~Ik~~~p~i~Ie~l~--pd~~g------- 220 (376)
.++.++.+++++.+.+.|+++|-+.++-.- - -+| -.+.++.|++..|++.+.+++ +...|
T Consensus 26 ~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d-----~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~dd 100 (464)
T 2nx9_A 26 RLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGED-----PWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADD 100 (464)
T ss_dssp CCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCC-----HHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCC-----HHHHHHHHHHhCCCCeEEEEeccccccCcccccch
Confidence 478899999999999999999999875210 0 112 145677777767888888776 33322
Q ss_pred -ChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeE--EEecCCCHHHHHHHHH
Q 017179 221 -NNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSI--MLGCGETPDQVVSTME 297 (376)
Q Consensus 221 -~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~i--mvGlGET~ee~~e~L~ 297 (376)
....++...++|+|++....-+.+ .+...+.++.+++ .|..+..++ ..|.--+.+.+++.++
T Consensus 101 v~~~~v~~a~~~Gvd~i~if~~~sd------------~~ni~~~i~~ak~---~G~~v~~~i~~~~~~~~~~e~~~~~a~ 165 (464)
T 2nx9_A 101 VVDTFVERAVKNGMDVFRVFDAMND------------VRNMQQALQAVKK---MGAHAQGTLCYTTSPVHNLQTWVDVAQ 165 (464)
T ss_dssp HHHHHHHHHHHTTCCEEEECCTTCC------------THHHHHHHHHHHH---TTCEEEEEEECCCCTTCCHHHHHHHHH
T ss_pred hhHHHHHHHHhCCcCEEEEEEecCH------------HHHHHHHHHHHHH---CCCEEEEEEEeeeCCCCCHHHHHHHHH
Confidence 144578888999998776422211 2345577788888 466665454 4455567888888999
Q ss_pred HHHHcCCcEEEee
Q 017179 298 KVRAAGVDVMTFG 310 (376)
Q Consensus 298 ~Lrel~vd~v~~~ 310 (376)
.+.+.|++.|.|.
T Consensus 166 ~l~~~Gad~I~l~ 178 (464)
T 2nx9_A 166 QLAELGVDSIALK 178 (464)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHHHCCCCEEEEc
Confidence 9999999888774
No 26
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=95.35 E-value=0.13 Score=50.78 Aligned_cols=140 Identities=13% Similarity=0.187 Sum_probs=96.7
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccc
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNV 235 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~ 235 (376)
.++.++.+++++++.+.|+++|-+.+. .. .....+.++.|++..+...+..+. +++.+.++...++|++.
T Consensus 21 ~~~~~~k~~ia~~L~~~Gv~~IE~g~p---~~----~~~~~~~~~~i~~~~~~~~v~~~~---r~~~~di~~a~~~g~~~ 90 (382)
T 2ztj_A 21 NFSTQDKVEIAKALDEFGIEYIEVTTP---VA----SPQSRKDAEVLASLGLKAKVVTHI---QCRLDAAKVAVETGVQG 90 (382)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCT---TS----CHHHHHHHHHHHTSCCSSEEEEEE---ESCHHHHHHHHHTTCSE
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEcCC---cC----CHHHHHHHHHHHhcCCCcEEEEEc---ccChhhHHHHHHcCCCE
Confidence 588999999999999999999988652 11 122456777777765555554432 12466789999999999
Q ss_pred ccccccchHHHHHhhcCCCCCHHH----HHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 236 FAHNIETVEELQSAVRDHRANFKQ----SLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 236 i~h~lEtv~~l~~~vr~r~~t~e~----~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
+...+-+++-....+ +.+.++ ..+.++.+++..+. +.+.-++.-++.-+.+.+.+.++.+.+. ++.|.+.
T Consensus 91 v~i~~~~s~~~~~~~---~~s~~e~l~~~~~~v~~ak~~g~~-~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~i~l~ 164 (382)
T 2ztj_A 91 IDLLFGTSKYLRAPH---GRDIPRIIEEAKEVIAYIREAAPH-VEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDRVGLA 164 (382)
T ss_dssp EEEEECC-----------CCCHHHHHHHHHHHHHHHHHHCTT-SEEEEEETTTTTSCHHHHHHHHHHHGGG-CSEEEEE
T ss_pred EEEEeccCHHHHHHh---CCCHHHHHHHHHHHHHHHHHcCCC-EEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCEEEec
Confidence 887766666222233 345544 56677788885211 7777777767777889999999999999 9998884
No 27
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=93.80 E-value=1.2 Score=41.20 Aligned_cols=114 Identities=18% Similarity=0.242 Sum_probs=83.5
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++....++++.+.|++-|-+|--. ++ -.+.|++|++.+|++.|.+=+ -+ +.+.++...++|.+.+
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt~~t----~~-----a~e~I~~l~~~~~~~~iGaGT-Vl--t~~~a~~Ai~AGA~fI 110 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEITFRS----DA-----AVEAIRLLRQAQPEMLIGAGT-IL--NGEQALAAKEAGATFV 110 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETTS----TT-----HHHHHHHHHHHCTTCEEEEEC-CC--SHHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC----CC-----HHHHHHHHHHhCCCCEEeECC-cC--CHHHHHHHHHcCCCEE
Confidence 468999999999999999999987421 21 257888899888888776533 22 6889999999999976
Q ss_pred cccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecC
Q 017179 237 AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (376)
Q Consensus 237 ~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY 312 (376)
- . +..+ .++++.+++. |+.+-.+++ |..|+...+ +.|.|+|.+|+.
T Consensus 111 v-------------s-P~~~----~~vi~~~~~~---gi~~ipGv~-----TptEi~~A~----~~Gad~vK~FPa 156 (232)
T 4e38_A 111 V-------------S-PGFN----PNTVRACQEI---GIDIVPGVN-----NPSTVEAAL----EMGLTTLKFFPA 156 (232)
T ss_dssp E-------------C-SSCC----HHHHHHHHHH---TCEEECEEC-----SHHHHHHHH----HTTCCEEEECST
T ss_pred E-------------e-CCCC----HHHHHHHHHc---CCCEEcCCC-----CHHHHHHHH----HcCCCEEEECcC
Confidence 2 2 2222 3566777774 566555543 899988774 689999999743
No 28
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=93.79 E-value=1.2 Score=40.87 Aligned_cols=113 Identities=14% Similarity=0.163 Sum_probs=83.3
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++....++++.+.|++-|-+|--. ++ -.+.|++|++.+|++.|.+=+ .. +.+.++...++|.+.+
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt~~t----~~-----a~~~I~~l~~~~p~~~IGAGT--Vl-t~~~a~~ai~AGA~fi 89 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVTLRT----EA-----GLAAISAIKKAVPEAIVGAGT--VC-TADDFQKAIDAGAQFI 89 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEETTS----TT-----HHHHHHHHHHHCTTSEEEEEC--CC-SHHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCC----cc-----HHHHHHHHHHHCCCCeEeecc--cc-CHHHHHHHHHcCCCEE
Confidence 578999999999999999999987421 21 357889999999988776532 11 6889999999999976
Q ss_pred cccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCc------eEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 237 AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGT------LTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 237 ~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi------~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
+. +..+ -++++.+++. |+ .+-.++ -|.+|+... .+.|.|++.+|
T Consensus 90 -------------vs-P~~~----~evi~~~~~~---~v~~~~~~~~~PG~-----~TptE~~~A----~~~Gad~vK~F 139 (217)
T 3lab_A 90 -------------VS-PGLT----PELIEKAKQV---KLDGQWQGVFLPGV-----ATASEVMIA----AQAGITQLKCF 139 (217)
T ss_dssp -------------EE-SSCC----HHHHHHHHHH---HHHCSCCCEEEEEE-----CSHHHHHHH----HHTTCCEEEET
T ss_pred -------------Ee-CCCc----HHHHHHHHHc---CCCccCCCeEeCCC-----CCHHHHHHH----HHcCCCEEEEC
Confidence 22 2222 2566777773 46 555555 588888776 56899999987
Q ss_pred c
Q 017179 311 Q 311 (376)
Q Consensus 311 q 311 (376)
+
T Consensus 140 P 140 (217)
T 3lab_A 140 P 140 (217)
T ss_dssp T
T ss_pred c
Confidence 3
No 29
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=93.12 E-value=1.1 Score=42.64 Aligned_cols=140 Identities=12% Similarity=0.094 Sum_probs=90.8
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEe-eeCCCCC----cccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHH
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITS-VDRDDLA----DQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK 230 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTs-g~r~dl~----d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~ 230 (376)
..+++++++.|+++.+.|.+.|-|-+ ..|+.-. +...+.+..+|+.|++.. ++.|.+=+ + +.+.++.-.+
T Consensus 34 ~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~-~~piSIDT--~--~~~va~aAl~ 108 (282)
T 1aj0_A 34 HNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF-EVWISVDT--S--KPEVIRESAK 108 (282)
T ss_dssp CTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC-CCEEEEEC--C--CHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc-CCeEEEeC--C--CHHHHHHHHH
Confidence 36789999999999999999999876 3455421 123566788888887764 45554422 2 5788888888
Q ss_pred cCccccccc-ccchHHHHHh----------hcCC--CCC--------------HHHHHHHHHHHHHhCCCCce---EEEe
Q 017179 231 SGLNVFAHN-IETVEELQSA----------VRDH--RAN--------------FKQSLDVLMMAKDYVPAGTL---TKTS 280 (376)
Q Consensus 231 aGld~i~h~-lEtv~~l~~~----------vr~r--~~t--------------~e~~L~vl~~ak~~~p~Gi~---tkt~ 280 (376)
+|.+.+|.- -+..+++++- |+.+ ..+ .+...+.++.+.+ .|+. +--+
T Consensus 109 aGa~iINdvsg~~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~---~Gi~~~~IilD 185 (282)
T 1aj0_A 109 VGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQ---AGIAKEKLLLD 185 (282)
T ss_dssp TTCCEEEETTTTCSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHH---TTCCGGGEEEE
T ss_pred cCCCEEEECCCCCCHHHHHHHHHhCCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHH---cCCChhhEEEe
Confidence 899888752 1122233322 1111 011 4555566677776 4654 5556
Q ss_pred EEEecCCCHHHHHHHHHHHHHcC
Q 017179 281 IMLGCGETPDQVVSTMEKVRAAG 303 (376)
Q Consensus 281 imvGlGET~ee~~e~L~~Lrel~ 303 (376)
-.+|||.|.++-+++|+.++++.
T Consensus 186 Pg~gf~k~~~~n~~ll~~l~~~~ 208 (282)
T 1aj0_A 186 PGFGFGKNLSHNYSLLARLAEFH 208 (282)
T ss_dssp CCTTSSCCHHHHHHHHHTGGGGG
T ss_pred CCCCcccCHHHHHHHHHHHHHHh
Confidence 66688999998888888777653
No 30
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=92.72 E-value=0.38 Score=46.52 Aligned_cols=137 Identities=9% Similarity=0.072 Sum_probs=80.7
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCC-CCcccHHHH--HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHH---H
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDD-LADQGSGHF--AQTVRKLKELKPNMLIEALVPDFRGNNGCVREV---A 229 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~d-l~d~g~~~~--~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L---~ 229 (376)
.++.++.+++++++.+.|+++|=+++...+. ..++ .-.| .+.++.|++ .|++.+.+|+|......+.+..+ .
T Consensus 20 ~~~~~~k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~-~~~~~~~e~l~~i~~-~~~~~~~~L~r~~~~~~~dv~~~~~a~ 97 (320)
T 3dxi_A 20 DFNSKIVDAYILAMNELPIDYLEVGYRNKPSKEYMG-KFGYTPVSVLKHLRN-ISTKKIAIMLNEKNTTPEDLNHLLLPI 97 (320)
T ss_dssp CCCHHHHHHHHHHHHTTTCCEEEEEECCSCCSSCCC-HHHHCCHHHHHHHHH-HCCSEEEEEEEGGGCCGGGHHHHHGGG
T ss_pred cCCHHHHHHHHHHHHHhCCCEEEEecccCCcccccc-ccccChHHHHHHHhh-ccCCeEEEEecCCCCChhhHHHHHHhh
Confidence 4889999999999999999999998754221 1111 1112 356677766 48899999886532112234433 3
Q ss_pred HcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHH-HHHHHHHHHHHcCCcEEE
Q 017179 230 KSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPD-QVVSTMEKVRAAGVDVMT 308 (376)
Q Consensus 230 ~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~e-e~~e~L~~Lrel~vd~v~ 308 (376)
++|+|.+..... ..+.++..++++.+++ .|+.+..+++..-+-++. +++..+..+ +.|++.|.
T Consensus 98 ~~Gvd~~ri~~~------------~~nle~~~~~v~~ak~---~G~~v~~~~~~~~~~~~~~~~l~~~~~~-~~G~~~i~ 161 (320)
T 3dxi_A 98 IGLVDMIRIAID------------PQNIDRAIVLAKAIKT---MGFEVGFNVMYMSKWAEMNGFLSKLKAI-DKIADLFC 161 (320)
T ss_dssp TTTCSEEEEEEC------------GGGHHHHHHHHHHHHT---TTCEEEEEECCTTTGGGSTTSGGGGGGG-TTTCSEEE
T ss_pred hcCCCEEEEEec------------HHHHHHHHHHHHHHHH---CCCEEEEEEEeCCCCCCHHHHHHHHHHh-hCCCCEEE
Confidence 467776654311 1236677777777777 466665555542232222 344444332 34677766
Q ss_pred ee
Q 017179 309 FG 310 (376)
Q Consensus 309 ~~ 310 (376)
+.
T Consensus 162 l~ 163 (320)
T 3dxi_A 162 MV 163 (320)
T ss_dssp EE
T ss_pred EC
Confidence 63
No 31
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=92.16 E-value=3.3 Score=39.14 Aligned_cols=138 Identities=13% Similarity=0.083 Sum_probs=84.8
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEee-eCCCCC----cccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHH
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSV-DRDDLA----DQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK 230 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg-~r~dl~----d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~ 230 (376)
..+++++++.|+++.+.|.+.|-|-|. .|+... +.-...+..+|+.|++. ++.|.+=+ + +.+.++.-.+
T Consensus 25 ~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~--~~piSIDT--~--~~~va~aAl~ 98 (280)
T 1eye_A 25 YLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ--GITVSIDT--M--RADVARAALQ 98 (280)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT--TCCEEEEC--S--CHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC--CCEEEEeC--C--CHHHHHHHHH
Confidence 468999999999999999999988663 244311 11256778888888764 45554322 2 5778888888
Q ss_pred cCccccccc-ccc-hHHHHHh----------hcCCC---------CC--------HHHHHHHHHHHHHhCCCCce---EE
Q 017179 231 SGLNVFAHN-IET-VEELQSA----------VRDHR---------AN--------FKQSLDVLMMAKDYVPAGTL---TK 278 (376)
Q Consensus 231 aGld~i~h~-lEt-v~~l~~~----------vr~r~---------~t--------~e~~L~vl~~ak~~~p~Gi~---tk 278 (376)
+|.+.+|.- -+. .+++++- |+.++ .. .+...+.++.+.+ .|+. +-
T Consensus 99 aGa~iINdvsg~~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~---~Gi~~~~Ii 175 (280)
T 1eye_A 99 NGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVA---AGVDPARLV 175 (280)
T ss_dssp TTCCEEEETTTTSSCTTHHHHHHHHTCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHH---TTCCGGGEE
T ss_pred cCCCEEEECCCCCCCHHHHHHHHHhCCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHH---cCCChhhEE
Confidence 898888652 111 2233322 11110 11 3444456677776 4653 55
Q ss_pred EeEEEecCCCHHHHHHHHHHHHHc
Q 017179 279 TSIMLGCGETPDQVVSTMEKVRAA 302 (376)
Q Consensus 279 t~imvGlGET~ee~~e~L~~Lrel 302 (376)
-+--+|||.|.++=+++|+.++++
T Consensus 176 lDPg~Gf~k~~~~n~~ll~~l~~~ 199 (280)
T 1eye_A 176 LDPGLGFAKTAQHNWAILHALPEL 199 (280)
T ss_dssp EECCTTSSCCHHHHHHHHHTHHHH
T ss_pred EECCCCcccCHHHHHHHHHHHHHh
Confidence 555568999998888888777765
No 32
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=91.55 E-value=4.1 Score=38.24 Aligned_cols=136 Identities=13% Similarity=0.122 Sum_probs=89.1
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHc--Ccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS--GLN 234 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a--Gld 234 (376)
.+.+++++.|++..+.|.+.|-|=++.. . +...+.+..+|+.|++.. ++.|.+=+. +.+.++.-.++ |.+
T Consensus 31 ~~~~~a~~~a~~~v~~GAdiIDIg~~s~-~--~eE~~rv~~vi~~l~~~~-~~pisIDT~----~~~v~~aal~a~~Ga~ 102 (271)
T 2yci_X 31 KDPRPIQEWARRQAEKGAHYLDVNTGPT-A--DDPVRVMEWLVKTIQEVV-DLPCCLDST----NPDAIEAGLKVHRGHA 102 (271)
T ss_dssp TCCHHHHHHHHHHHHTTCSEEEEECCSC-S--SCHHHHHHHHHHHHHHHC-CCCEEEECS----CHHHHHHHHHHCCSCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcC-c--hhHHHHHHHHHHHHHHhC-CCeEEEeCC----CHHHHHHHHHhCCCCC
Confidence 5789999999999999999998866542 1 123678889999998764 344544332 57888888888 999
Q ss_pred ccc-ccccch--HHHHHh----------hcC--C--CCCHHHHHH----HHHHHHHhCCCCce---EEEeEEEec-CCCH
Q 017179 235 VFA-HNIETV--EELQSA----------VRD--H--RANFKQSLD----VLMMAKDYVPAGTL---TKTSIMLGC-GETP 289 (376)
Q Consensus 235 ~i~-h~lEtv--~~l~~~----------vr~--r--~~t~e~~L~----vl~~ak~~~p~Gi~---tkt~imvGl-GET~ 289 (376)
.+| .+.+.. +++.+- |+. + ..+.++.++ .++.+.+ .|+. +--+-.+|+ |-+.
T Consensus 103 iINdvs~~~d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~---~Gi~~~~IilDPg~gfigk~~ 179 (271)
T 2yci_X 103 MINSTSADQWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADA---HGIPMTELYIDPLILPVNVAQ 179 (271)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHH---TTCCGGGEEEECCCCCTTTST
T ss_pred EEEECCCCccccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHH---CCCCcccEEEecCCCccccCH
Confidence 887 444322 344432 221 1 134444444 4455555 4664 667777788 8888
Q ss_pred HHHHHHHHHHHHcC
Q 017179 290 DQVVSTMEKVRAAG 303 (376)
Q Consensus 290 ee~~e~L~~Lrel~ 303 (376)
++-+++|+.++.+.
T Consensus 180 ~~~~~~l~~l~~~~ 193 (271)
T 2yci_X 180 EHAVEVLETIRQIK 193 (271)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 87777777766654
No 33
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=91.05 E-value=3.1 Score=39.51 Aligned_cols=80 Identities=16% Similarity=0.244 Sum_probs=56.9
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCC--ChHHHHHHHHcCc
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG--NNGCVREVAKSGL 233 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g--~~e~l~~L~~aGl 233 (376)
+++++||.+.|.+..+.|..-|+|=.=|.+.-+....+.|.+++..|++..|++.|.+.++.-.. .++.+..+ +..+
T Consensus 30 PvTpeEia~~A~~a~~AGAaivHlHvRd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTg~~~~~~~eeR~~~~-~~~P 108 (282)
T 2y7e_A 30 PITPEEQAKEAKACFEAGARVIHLHIREDDGRPSQRLDRFQEAISAIREVVPEIIIQISTGGAVGESFDKRLAPL-ALKP 108 (282)
T ss_dssp CCSHHHHHHHHHHHHHHTEEEEEECEECTTSCEECCHHHHHHHHHHHHHHCTTSEEEECSSCSTTCCHHHHHGGG-GGCC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCHHHHHHHh-hcCC
Confidence 68999999999999999998777754431111212377899999999998899999988753211 23444444 5567
Q ss_pred ccc
Q 017179 234 NVF 236 (376)
Q Consensus 234 d~i 236 (376)
|..
T Consensus 109 e~a 111 (282)
T 2y7e_A 109 EMA 111 (282)
T ss_dssp SEE
T ss_pred CEE
Confidence 766
No 34
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=90.79 E-value=1.6 Score=41.55 Aligned_cols=83 Identities=11% Similarity=0.077 Sum_probs=57.8
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCC-CChHHHHHHHHcCcc
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFR-GNNGCVREVAKSGLN 234 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~-g~~e~l~~L~~aGld 234 (376)
+++++||.+.|.+..+.|..-|+|=.=+.+.-+....+.|.+++..|++..|++.|.+.++.-. ..++.+..+ ...+|
T Consensus 30 PvTpeEia~~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTgg~~~~~eeR~~~~-~~~Pe 108 (284)
T 3chv_A 30 PITVSEQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTEGLHTHCPGMIVQFSTGGRSGAGQARGGML-PLKPD 108 (284)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCTTTCCGGGGGTTG-GGCCS
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCHHHHHHhh-hcCCC
Confidence 6899999999999999999888775433221222237889999999999889999998774211 123344444 45667
Q ss_pred ccccc
Q 017179 235 VFAHN 239 (376)
Q Consensus 235 ~i~h~ 239 (376)
....+
T Consensus 109 ~aSl~ 113 (284)
T 3chv_A 109 MASLS 113 (284)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 65444
No 35
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=90.25 E-value=1.4 Score=41.47 Aligned_cols=146 Identities=10% Similarity=0.139 Sum_probs=83.2
Q ss_pred HHHHHHHHHHhhCCCcEEEEecC-C--CCCChHHHHHHHHcCcccccccccc---------hH-HHHHhhcCCCCCHHHH
Q 017179 194 HFAQTVRKLKELKPNMLIEALVP-D--FRGNNGCVREVAKSGLNVFAHNIET---------VE-ELQSAVRDHRANFKQS 260 (376)
Q Consensus 194 ~~~elvr~Ik~~~p~i~Ie~l~p-d--~~g~~e~l~~L~~aGld~i~h~lEt---------v~-~l~~~vr~r~~t~e~~ 260 (376)
.+.+.++++++......|-.++. | +....+.++.|.++|+|.+..++.. +. .-.+.+. .+.+.++.
T Consensus 4 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~-~G~~~~~~ 82 (267)
T 3vnd_A 4 RYQAKFAALKAQDKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLA-AGTTSSDC 82 (267)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHH-TTCCHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHH-cCCCHHHH
Confidence 35667777776654455554442 2 2224667888889999998777422 22 2223444 57889999
Q ss_pred HHHHHHHHHhCCCCceEEEeEEEecCC-CHH---HHHHHHHHHHHcCCcEEEeecCCCCC----------CCCCCCcccC
Q 017179 261 LDVLMMAKDYVPAGTLTKTSIMLGCGE-TPD---QVVSTMEKVRAAGVDVMTFGQYMRPS----------KRHMPVSEYI 326 (376)
Q Consensus 261 L~vl~~ak~~~p~Gi~tkt~imvGlGE-T~e---e~~e~L~~Lrel~vd~v~~~qY~~P~----------~~~~~v~~~v 326 (376)
+++++.+++..+. ++ ..+ ++. +.- -+.+.++.+.+.|+|.+.+ .-+.+. ..++.+--.+
T Consensus 83 ~~~v~~ir~~~~~-~P--ivl---m~Y~npv~~~g~e~f~~~~~~aGvdgvii-~Dlp~ee~~~~~~~~~~~gl~~i~li 155 (267)
T 3vnd_A 83 FDIITKVRAQHPD-MP--IGL---LLYANLVFANGIDEFYTKAQAAGVDSVLI-ADVPVEESAPFSKAAKAHGIAPIFIA 155 (267)
T ss_dssp HHHHHHHHHHCTT-CC--EEE---EECHHHHHHHCHHHHHHHHHHHTCCEEEE-TTSCGGGCHHHHHHHHHTTCEEECEE
T ss_pred HHHHHHHHhcCCC-CC--EEE---EecCcHHHHhhHHHHHHHHHHcCCCEEEe-CCCCHhhHHHHHHHHHHcCCeEEEEE
Confidence 9999999985323 32 222 232 211 1256677888889998777 333221 1222222223
Q ss_pred ChH-HHHHHHHHHHHH-hhhhhc
Q 017179 327 TPE-AFERYRALGMEM-GFRYVA 347 (376)
Q Consensus 327 ~pe-~~~~l~~~a~~~-gf~~~~ 347 (376)
.|. ..++++.++..- ||.|+.
T Consensus 156 aP~t~~eri~~i~~~~~gfvY~v 178 (267)
T 3vnd_A 156 PPNADADTLKMVSEQGEGYTYLL 178 (267)
T ss_dssp CTTCCHHHHHHHHHHCCSCEEES
T ss_pred CCCCCHHHHHHHHHhCCCcEEEE
Confidence 332 235666666553 788874
No 36
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=89.59 E-value=2.1 Score=38.18 Aligned_cols=76 Identities=14% Similarity=0.212 Sum_probs=52.7
Q ss_pred CchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccc
Q 017179 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFA 237 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~ 237 (376)
..+++.+.++.+.+.|++.+.++..+... . +.....++++.|++.. ++.+-+ .....+.+.++.+.++|+|.+.
T Consensus 31 ~~~~~~~~a~~~~~~G~d~i~v~~~~~~~-~--~~~~~~~~i~~i~~~~-~ipvi~--~g~i~~~~~~~~~~~~Gad~V~ 104 (253)
T 1h5y_A 31 EVGDPVEMAVRYEEEGADEIAILDITAAP-E--GRATFIDSVKRVAEAV-SIPVLV--GGGVRSLEDATTLFRAGADKVS 104 (253)
T ss_dssp EEECHHHHHHHHHHTTCSCEEEEECCCCT-T--THHHHHHHHHHHHHHC-SSCEEE--ESSCCSHHHHHHHHHHTCSEEE
T ss_pred ecccHHHHHHHHHHcCCCEEEEEeCCccc-c--CCcccHHHHHHHHHhc-CCCEEE--ECCCCCHHHHHHHHHcCCCEEE
Confidence 45688999999999999999998544321 1 2334577888888765 343332 2222267788999999999887
Q ss_pred cc
Q 017179 238 HN 239 (376)
Q Consensus 238 h~ 239 (376)
.+
T Consensus 105 i~ 106 (253)
T 1h5y_A 105 VN 106 (253)
T ss_dssp ES
T ss_pred EC
Confidence 65
No 37
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=89.18 E-value=1.6 Score=42.10 Aligned_cols=140 Identities=11% Similarity=0.080 Sum_probs=79.6
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEee-eCCC--CCc-ccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHc
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSV-DRDD--LAD-QGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS 231 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg-~r~d--l~d-~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a 231 (376)
..+++++++.|+++.+.|.+-|-|=|. .|+. ... .-.+.+..+|+.|++..|++.|.+=+ + +.+.++.-.++
T Consensus 61 ~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT--~--~~~VaeaAl~a 136 (318)
T 2vp8_A 61 TFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDT--W--RAQVAKAACAA 136 (318)
T ss_dssp ---CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEEEC--S--CHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeC--C--CHHHHHHHHHh
Confidence 368899999999999999999887543 2443 111 11345677788888877677775533 2 56777777778
Q ss_pred Ccccccc-cccchHHHHHh----------hcCCCC---------CH------------HHHHHHHHHHHHhCCCCce---
Q 017179 232 GLNVFAH-NIETVEELQSA----------VRDHRA---------NF------------KQSLDVLMMAKDYVPAGTL--- 276 (376)
Q Consensus 232 Gld~i~h-~lEtv~~l~~~----------vr~r~~---------t~------------e~~L~vl~~ak~~~p~Gi~--- 276 (376)
|.+.+|- +-+..+++++- |+.++. .| +...+.++.+.+ .|+.
T Consensus 137 Ga~iINDVsg~~d~~m~~vaa~~g~~vVlmh~~G~~p~tmq~~~~y~~~~~dv~~ev~~~l~~~i~~a~~---aGI~~~~ 213 (318)
T 2vp8_A 137 GADLINDTWGGVDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVA---AGVAREK 213 (318)
T ss_dssp TCCEEEETTSSSSTTHHHHHHHHTCEEEEECC-------------CCSCHHHHHHHHHHHHHHHHHHHHH---TTCCGGG
T ss_pred CCCEEEECCCCCchHHHHHHHHhCCCEEEECCCCCCccccccccccccccccHHHHHHHHHHHHHHHHHH---cCCChhh
Confidence 8887753 11112233221 221111 12 233344566666 4653
Q ss_pred EEEeEEEecCCCHHHHHHHHHHHHHc
Q 017179 277 TKTSIMLGCGETPDQVVSTMEKVRAA 302 (376)
Q Consensus 277 tkt~imvGlGET~ee~~e~L~~Lrel 302 (376)
+--+--+|||.|.++-+++|+.++++
T Consensus 214 IilDPG~GF~Kt~~~nl~ll~~l~~l 239 (318)
T 2vp8_A 214 VLIDPAHDFGKNTFHGLLLLRHVADL 239 (318)
T ss_dssp EEEETTTTCCTTSHHHHHHHHTHHHH
T ss_pred EEEcCCCCcccCHHHHHHHHHHHHHH
Confidence 44454557888888777777766654
No 38
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=89.18 E-value=5.1 Score=38.14 Aligned_cols=139 Identities=13% Similarity=0.096 Sum_probs=76.0
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEee-eCCCCC----cccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHH
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSV-DRDDLA----DQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK 230 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg-~r~dl~----d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~ 230 (376)
..+++++++.|+++.+.|.+.|-|=|. .|+... +.-.+.+..+|+.|++. ++.|.+=+ + +.+.++.-.+
T Consensus 48 ~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~--~vpiSIDT--~--~~~Va~aAl~ 121 (294)
T 2dqw_A 48 YLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL--GVPVSVDT--R--KPEVAEEALK 121 (294)
T ss_dssp -----CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTT--CSCEEEEC--S--CHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC--CCeEEEEC--C--CHHHHHHHHH
Confidence 368899999999999999999988552 344311 11256788888888764 45554322 2 5667777777
Q ss_pred cCcccccc-cccchHHHHHh----------hcCC---CCC--------------HHHHHHHHHHHHHhCCCCce-EEEeE
Q 017179 231 SGLNVFAH-NIETVEELQSA----------VRDH---RAN--------------FKQSLDVLMMAKDYVPAGTL-TKTSI 281 (376)
Q Consensus 231 aGld~i~h-~lEtv~~l~~~----------vr~r---~~t--------------~e~~L~vl~~ak~~~p~Gi~-tkt~i 281 (376)
+|.+.+|- +-+..+++++- |+.+ ..+ .+...+.++.+.+ .|+. +--+-
T Consensus 122 aGa~iINdVsg~~d~~m~~v~a~~~~~vVlmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~---~Gi~~IilDP 198 (294)
T 2dqw_A 122 LGAHLLNDVTGLRDERMVALAARHGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALS---AGVPQVVLDP 198 (294)
T ss_dssp HTCSEEECSSCSCCHHHHHHHHHHTCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHH---TTCSCEEEEC
T ss_pred hCCCEEEECCCCCChHHHHHHHHhCCCEEEEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHHH---CCCCcEEEcC
Confidence 78777653 11122233322 2211 111 2233445566666 3553 22222
Q ss_pred EEecCCCHHHHHHHHHHHHHcC
Q 017179 282 MLGCGETPDQVVSTMEKVRAAG 303 (376)
Q Consensus 282 mvGlGET~ee~~e~L~~Lrel~ 303 (376)
-+|||.|.++-+++|+.++++.
T Consensus 199 G~Gf~kt~~~n~~ll~~l~~~~ 220 (294)
T 2dqw_A 199 GFGFGKLLEHNLALLRRLDEIV 220 (294)
T ss_dssp CTTSSCCHHHHHHHHHTHHHHH
T ss_pred CCCcccCHHHHHHHHHHHHHHh
Confidence 2378999988888887776653
No 39
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=89.00 E-value=12 Score=33.69 Aligned_cols=112 Identities=16% Similarity=0.183 Sum_probs=78.0
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++.++.++++.+.|++-|-|+- +. ++ -.+.++.+++.+|++.+..=+ -+ +.+.++...++|.|.+
T Consensus 25 ~~~~~~~~~~~al~~gGv~~iel~~--k~--~~-----~~~~i~~l~~~~~~~~vgagt-vi--~~d~~~~A~~aGAd~v 92 (214)
T 1wbh_A 25 KKLEHAVPMAKALVAGGVRVLNVTL--RT--EC-----AVDAIRAIAKEVPEAIVGAGT-VL--NPQQLAEVTEAGAQFA 92 (214)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEES--CS--TT-----HHHHHHHHHHHCTTSEEEEES-CC--SHHHHHHHHHHTCSCE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeC--CC--hh-----HHHHHHHHHHHCcCCEEeeCE-EE--EHHHHHHHHHcCCCEE
Confidence 5788999999999999999998882 21 11 246888888888887776533 22 6788999999999976
Q ss_pred cccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 237 AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 237 ~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
... ..+ .++++.+++. |+ .+|.| -.|.+|+.+. .+.|.|++.+|
T Consensus 93 ~~p--------------~~d----~~v~~~~~~~---g~----~~i~G-~~t~~e~~~A----~~~Gad~v~~F 136 (214)
T 1wbh_A 93 ISP--------------GLT----EPLLKAATEG---TI----PLIPG-ISTVSELMLG----MDYGLKEFKFF 136 (214)
T ss_dssp EES--------------SCC----HHHHHHHHHS---SS----CEEEE-ESSHHHHHHH----HHTTCCEEEET
T ss_pred EcC--------------CCC----HHHHHHHHHh---CC----CEEEe-cCCHHHHHHH----HHCCCCEEEEe
Confidence 321 111 3566666663 43 34456 3677777554 36899999885
No 40
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=87.95 E-value=13 Score=33.62 Aligned_cols=113 Identities=22% Similarity=0.280 Sum_probs=78.6
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++.++.++++.+.|++-|-|+- +. ++ -.+.++++++.+|++.+..=+ -+ +.+.++...++|+|.+
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel~~--k~--~~-----~~~~i~~l~~~~~~l~vgaGt-vl--~~d~~~~A~~aGAd~v 93 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEITF--RS--EA-----AADAIRLLRANRPDFLIAAGT-VL--TAEQVVLAKSSGADFV 93 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEET--TS--TT-----HHHHHHHHHHHCTTCEEEEES-CC--SHHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEec--cC--ch-----HHHHHHHHHHhCcCcEEeeCc-Ee--eHHHHHHHHHCCCCEE
Confidence 5788999999999999999888872 21 11 246888888888887776544 22 5688999999999977
Q ss_pred cccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeec
Q 017179 237 AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQ 311 (376)
Q Consensus 237 ~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~q 311 (376)
-. +..+ .++++.+++. |.. +|+| -.|.+|+.+. .+.|.|++.+|+
T Consensus 94 ~~--------------p~~d----~~v~~~ar~~---g~~----~i~G-v~t~~e~~~A----~~~Gad~vk~Fp 138 (224)
T 1vhc_A 94 VT--------------PGLN----PKIVKLCQDL---NFP----ITPG-VNNPMAIEIA----LEMGISAVKFFP 138 (224)
T ss_dssp EC--------------SSCC----HHHHHHHHHT---TCC----EECE-ECSHHHHHHH----HHTTCCEEEETT
T ss_pred EE--------------CCCC----HHHHHHHHHh---CCC----EEec-cCCHHHHHHH----HHCCCCEEEEee
Confidence 22 1211 4566777773 332 3445 3578887553 468999998853
No 41
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=87.92 E-value=3.2 Score=39.05 Aligned_cols=110 Identities=9% Similarity=0.195 Sum_probs=65.3
Q ss_pred HHHHHHHHHhhCCCcEEEEec---CCCCCChHHHHHHHHcCcccccccccc---------hH-HHHHhhcCCCCCHHHHH
Q 017179 195 FAQTVRKLKELKPNMLIEALV---PDFRGNNGCVREVAKSGLNVFAHNIET---------VE-ELQSAVRDHRANFKQSL 261 (376)
Q Consensus 195 ~~elvr~Ik~~~p~i~Ie~l~---pd~~g~~e~l~~L~~aGld~i~h~lEt---------v~-~l~~~vr~r~~t~e~~L 261 (376)
+.++++++++......|-.++ |++....+.++.|.++|+|.+..++.. .. .-.+.+. .+.+.++.+
T Consensus 7 i~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~-~G~~~~~~~ 85 (271)
T 3nav_A 7 YQALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALA-AKTTPDICF 85 (271)
T ss_dssp HHHHHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHH-TTCCHHHHH
T ss_pred HHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHH-cCCCHHHHH
Confidence 556677777655445555554 333224566788888899988777432 22 2233455 578899999
Q ss_pred HHHHHHHHhCCCCceEEEeEEEecCCCHH--HHHHHHHHHHHcCCcEEEe
Q 017179 262 DVLMMAKDYVPAGTLTKTSIMLGCGETPD--QVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 262 ~vl~~ak~~~p~Gi~tkt~imvGlGET~e--e~~e~L~~Lrel~vd~v~~ 309 (376)
+.++.+++.++. +++ -+| |.-.... -+.+.++.+.+.|+|.+.+
T Consensus 86 ~~v~~~r~~~~~-~Pi--vlm-~Y~n~v~~~g~~~f~~~~~~aGvdGvIi 131 (271)
T 3nav_A 86 ELIAQIRARNPE-TPI--GLL-MYANLVYARGIDDFYQRCQKAGVDSVLI 131 (271)
T ss_dssp HHHHHHHHHCTT-SCE--EEE-ECHHHHHHTCHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHhcCCC-CCE--EEE-ecCcHHHHHhHHHHHHHHHHCCCCEEEE
Confidence 999999885333 222 122 2111111 1255677778888887766
No 42
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=87.79 E-value=4.7 Score=38.04 Aligned_cols=81 Identities=15% Similarity=0.199 Sum_probs=55.3
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCC-hHHHHHHHHcCcc
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN-NGCVREVAKSGLN 234 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~-~e~l~~L~~aGld 234 (376)
+++++|+.+.|.+..+.|..-|+|=-=|.+.-+....+.|.+++..|++..|++.|.+.++.-.+. ++. ..+.+..+|
T Consensus 26 PvTpeEia~~A~~~~~AGAaivHlHvRd~~G~~s~d~~~~~e~~~~IR~~~pd~ii~~Ttg~~~~~~e~R-~~~~~~~Pe 104 (275)
T 3no5_A 26 PITVSEQVESTQAAFEAGATLVHLHVRNDDETPTSNPDRFALVLEGIRKHAPGMITQVSTGGRSGAGNER-GAMLSLRPD 104 (275)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCCCTTCCGGG-GTTGGGCCS
T ss_pred CCCHHHHHHHHHHHHHccCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCHHHH-hhHhhcCCC
Confidence 699999999999999999987777543322222123678999999999999999998877531111 222 333444566
Q ss_pred ccc
Q 017179 235 VFA 237 (376)
Q Consensus 235 ~i~ 237 (376)
...
T Consensus 105 ~aS 107 (275)
T 3no5_A 105 MAS 107 (275)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 43
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=87.68 E-value=16 Score=33.12 Aligned_cols=112 Identities=19% Similarity=0.278 Sum_probs=76.9
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++.++.++++.+.|++-|-|+- +. + .-.+.++.+++.+|++.+..=+. + +.+.++...++|.|.+
T Consensus 35 ~~~~~~~~~~~al~~gGv~~iel~~--k~--~-----~~~~~i~~l~~~~~~~~igagtv-l--~~d~~~~A~~aGAd~v 102 (225)
T 1mxs_A 35 AREEDILPLADALAAGGIRTLEVTL--RS--Q-----HGLKAIQVLREQRPELCVGAGTV-L--DRSMFAAVEAAGAQFV 102 (225)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEES--SS--T-----HHHHHHHHHHHHCTTSEEEEECC-C--SHHHHHHHHHHTCSSE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEec--CC--c-----cHHHHHHHHHHhCcccEEeeCeE-e--eHHHHHHHHHCCCCEE
Confidence 4688999999999999999888872 21 1 13467888888888888766443 3 6788999999999976
Q ss_pred cccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 237 AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 237 ~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
... ..+ .++++.+++. |+ .+|.| -.|.+|+.+.+ +.|.|++.+|
T Consensus 103 ~~p--------------~~d----~~v~~~~~~~---g~----~~i~G-~~t~~e~~~A~----~~Gad~vk~F 146 (225)
T 1mxs_A 103 VTP--------------GIT----EDILEAGVDS---EI----PLLPG-ISTPSEIMMGY----ALGYRRFKLF 146 (225)
T ss_dssp ECS--------------SCC----HHHHHHHHHC---SS----CEECE-ECSHHHHHHHH----TTTCCEEEET
T ss_pred EeC--------------CCC----HHHHHHHHHh---CC----CEEEe-eCCHHHHHHHH----HCCCCEEEEc
Confidence 321 111 3556666662 33 34445 36777765543 6788888885
No 44
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=87.26 E-value=2.1 Score=41.23 Aligned_cols=139 Identities=18% Similarity=0.176 Sum_probs=83.4
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeC-CCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCC--C--CChHHHHHHHH
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDR-DDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF--R--GNNGCVREVAK 230 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r-~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~--~--g~~e~l~~L~~ 230 (376)
+++++||.+.|.+..+.|..-++|=.=+. +..+....+.|.+++..|++. +++.|.+.++.- . ..++.+..+.+
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~y~e~i~~IR~~-~d~iI~~TTgg~~~~~~~~eeR~~~~~~ 106 (314)
T 3lot_A 28 PVTPDQIVEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREIKKQ-SDVVINVTTGGGGTLGIPVEERAKVVPA 106 (314)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHHH-CCCEEEECSSTTGGGTCCHHHHTTHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeecCCCCCCcCCCHHHHHHHHHHHHhc-CCeEEEeCCCCcCCCCCCHHHHHHHHHh
Confidence 69999999999999999998777754432 122222377899999999987 688888877521 1 13445555556
Q ss_pred cCcccccccccchH-H---HHHhhcCC-----------------CCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCH
Q 017179 231 SGLNVFAHNIETVE-E---LQSAVRDH-----------------RANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETP 289 (376)
Q Consensus 231 aGld~i~h~lEtv~-~---l~~~vr~r-----------------~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ 289 (376)
..+|....|.=+.+ - ...++... ..+++..-+.++.+++. | |+.-+.+ -+.
T Consensus 107 ~~Pe~aSln~Gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~N~~~~i~~~~~~~~e~---G--i~pE~e~---fd~ 178 (314)
T 3lot_A 107 LKPEIATFNMGSMNFAIHPLLKKYKEFKYDWEPEYLEMTRDIVFRNTFKDLEALSRIFKEN---D--TKPELEC---YDI 178 (314)
T ss_dssp HCCSEEEEECCCEECBCTTHHHHCCCCSSTHHHHHHHHGGGCEECCCHHHHHHHHHHHHHH---T--CEEEEEE---CSH
T ss_pred cCCceeeecCCCcccccccccccccccccccchhhcccCCCceecCCHHHHHHHHHHHHHc---C--CEEEEEE---ECH
Confidence 56776655432221 0 00111101 13567777777777773 5 4555544 244
Q ss_pred HHHHHHHHHHHHcCC
Q 017179 290 DQVVSTMEKVRAAGV 304 (376)
Q Consensus 290 ee~~e~L~~Lrel~v 304 (376)
.++.. +..|.+-|+
T Consensus 179 g~l~~-~~~l~~~Gl 192 (314)
T 3lot_A 179 GQIYN-TAFMFHEGY 192 (314)
T ss_dssp HHHHH-HHHHHHTTC
T ss_pred HHHHH-HHHHHHCCC
Confidence 44444 444555554
No 45
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=87.18 E-value=3.2 Score=38.51 Aligned_cols=153 Identities=13% Similarity=0.141 Sum_probs=89.9
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCc--ccHHHHHHHHHHHHhhCCCcEEE--EecCCCCCChHHHHHHHHcC
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLAD--QGSGHFAQTVRKLKELKPNMLIE--ALVPDFRGNNGCVREVAKSG 232 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d--~g~~~~~elvr~Ik~~~p~i~Ie--~l~pd~~g~~e~l~~L~~aG 232 (376)
.|...+.+.++.+.+.|++.+++==.|..-.|. .| .++|++|++..|+..+. +.+-+ ..+.++.+.++|
T Consensus 37 aD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G----~~~v~~lr~~~p~~~ldvHLmv~~---p~~~i~~~~~aG 109 (246)
T 3inp_A 37 ADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFG----PMVLKALRDYGITAGMDVHLMVKP---VDALIESFAKAG 109 (246)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCC----HHHHHHHHHHTCCSCEEEEEECSS---CHHHHHHHHHHT
T ss_pred CChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcC----HHHHHHHHHhCCCCeEEEEEeeCC---HHHHHHHHHHcC
Confidence 688888999999999999988886665432222 23 36788888877554443 33322 245788999999
Q ss_pred cccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecC
Q 017179 233 LNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (376)
Q Consensus 233 ld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY 312 (376)
+|.+....|+.+. ..++++.+++ .|+ +.++.+--+ |+.+.++-+ .+ .+|+|.+. -
T Consensus 110 Ad~itvH~Ea~~~--------------~~~~i~~ir~---~G~--k~Gvalnp~-Tp~e~l~~~---l~-~vD~VlvM-s 164 (246)
T 3inp_A 110 ATSIVFHPEASEH--------------IDRSLQLIKS---FGI--QAGLALNPA-TGIDCLKYV---ES-NIDRVLIM-S 164 (246)
T ss_dssp CSEEEECGGGCSC--------------HHHHHHHHHT---TTS--EEEEEECTT-CCSGGGTTT---GG-GCSEEEEE-C
T ss_pred CCEEEEccccchh--------------HHHHHHHHHH---cCC--eEEEEecCC-CCHHHHHHH---Hh-cCCEEEEe-e
Confidence 9999888775431 1345556666 354 566654433 333333222 11 36777653 1
Q ss_pred CCCCCCCCCCcccCChHHHHHHHHHHHHHh
Q 017179 313 MRPSKRHMPVSEYITPEAFERYRALGMEMG 342 (376)
Q Consensus 313 ~~P~~~~~~v~~~v~pe~~~~l~~~a~~~g 342 (376)
..|+..+-+... ...++.++|+++..+.|
T Consensus 165 V~PGfgGQ~fi~-~~l~KI~~lr~~~~~~~ 193 (246)
T 3inp_A 165 VNPGFGGQKFIP-AMLDKAKEISKWISSTD 193 (246)
T ss_dssp SCTTC--CCCCT-THHHHHHHHHHHHHHHT
T ss_pred ecCCCCCcccch-HHHHHHHHHHHHHHhcC
Confidence 246543332211 12356677777665555
No 46
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=86.48 E-value=1.4 Score=39.69 Aligned_cols=75 Identities=7% Similarity=0.060 Sum_probs=50.8
Q ss_pred hhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
.++.+.++.+.+.|++.+.+..-+....+ ...+ +.+++|++.. ++.+.+ .....+++.++.+.++|+|.+..+
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~~~d~~~~~---~~~~-~~i~~i~~~~-~ipv~v--~ggi~~~~~~~~~l~~Gad~V~lg 103 (244)
T 2y88_A 31 GSAVDAALGWQRDGAEWIHLVDLDAAFGR---GSNH-ELLAEVVGKL-DVQVEL--SGGIRDDESLAAALATGCARVNVG 103 (244)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEEHHHHTTS---CCCH-HHHHHHHHHC-SSEEEE--ESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCcccccC---CChH-HHHHHHHHhc-CCcEEE--ECCCCCHHHHHHHHHcCCCEEEEC
Confidence 37888899999999999998753321111 1124 8888888765 344432 222236788999999999988776
Q ss_pred cc
Q 017179 240 IE 241 (376)
Q Consensus 240 lE 241 (376)
.+
T Consensus 104 ~~ 105 (244)
T 2y88_A 104 TA 105 (244)
T ss_dssp HH
T ss_pred ch
Confidence 44
No 47
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=86.38 E-value=4.2 Score=38.86 Aligned_cols=99 Identities=16% Similarity=0.134 Sum_probs=58.8
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEE-ecCCCC---CCh-HHHHHH---
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA-LVPDFR---GNN-GCVREV--- 228 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~-l~pd~~---g~~-e~l~~L--- 228 (376)
.+.+++...+..+.+.|++.|+...||.+...+++..+-.++|+.|++.. +..|.+ ..|+.. .+. ..++.|
T Consensus 94 ~~~~~l~~~L~~~~~~GI~nILaLrGDpp~~~~~~~~~A~dLv~~ir~~~-~f~IgvA~yPE~Hp~a~~~~~d~~~Lk~K 172 (304)
T 3fst_A 94 ATPDELRTIARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVA-DFDISVAAYPEVHPEAKSAQADLLNLKRK 172 (304)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCCC------CCCHHHHHHHHHHHC-CCEEEEEECTTCCTTCSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCCCCCCCCCHHHHHHHHHHcC-CCeEEEEeCCCcCCCCCCHHHHHHHHHHH
Confidence 45788999999999999999999998865333334455677888887753 455554 344321 121 223333
Q ss_pred HHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHH
Q 017179 229 AKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD 269 (376)
Q Consensus 229 ~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~ 269 (376)
.++|+|.+ |.-.-++.+.+++.++.+++
T Consensus 173 vdAGAdf~-------------iTQ~ffD~~~~~~f~~~~r~ 200 (304)
T 3fst_A 173 VDAGANRA-------------ITQFFFDVESYLRFRDRCVS 200 (304)
T ss_dssp HHHTCCEE-------------EECCCSCHHHHHHHHHHHHH
T ss_pred HHcCCCEE-------------EeCccCCHHHHHHHHHHHHh
Confidence 36777753 12123556666666666666
No 48
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=86.00 E-value=6.8 Score=35.16 Aligned_cols=132 Identities=17% Similarity=0.212 Sum_probs=76.4
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCC-CcEEEEecCCCCCChHHHHHHHHcCccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSGLNV 235 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aGld~ 235 (376)
.|.....+.++.+.+.|++.+.|---|....+.. ..-.+.+++|++..+ .+.+.+.+-| ..+.++.+.++|+|.
T Consensus 16 ~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~--~~~~~~~~~lr~~~~~~~~v~lmv~d---~~~~i~~~~~agad~ 90 (228)
T 1h1y_A 16 SDFANLAAEADRMVRLGADWLHMDIMDGHFVPNL--TIGAPVIQSLRKHTKAYLDCHLMVTN---PSDYVEPLAKAGASG 90 (228)
T ss_dssp SCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCB--CBCHHHHHHHHTTCCSEEEEEEESSC---GGGGHHHHHHHTCSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEEecCCcCcch--hhCHHHHHHHHhhcCCcEEEEEEecC---HHHHHHHHHHcCCCE
Confidence 5777888889999999999887764443322211 011367888887653 2445556533 234588888999999
Q ss_pred ccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHc--CCcEEEeecCC
Q 017179 236 FAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAA--GVDVMTFGQYM 313 (376)
Q Consensus 236 i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel--~vd~v~~~qY~ 313 (376)
+....|..+.. +.++++.+++ .|+. .++.+. -.|+.+. ++.+.+. ++|++.+....
T Consensus 91 v~vH~~~~~~~-------------~~~~~~~i~~---~g~~--igv~~~-p~t~~e~---~~~~~~~~~~~d~vl~~sv~ 148 (228)
T 1h1y_A 91 FTFHIEVSRDN-------------WQELIQSIKA---KGMR--PGVSLR-PGTPVEE---VFPLVEAENPVELVLVMTVE 148 (228)
T ss_dssp EEEEGGGCTTT-------------HHHHHHHHHH---TTCE--EEEEEC-TTSCGGG---GHHHHHSSSCCSEEEEESSC
T ss_pred EEECCCCcccH-------------HHHHHHHHHH---cCCC--EEEEEe-CCCCHHH---HHHHHhcCCCCCEEEEEeec
Confidence 86655532211 0244555555 3543 233332 2344333 3344555 78988886443
Q ss_pred CCC
Q 017179 314 RPS 316 (376)
Q Consensus 314 ~P~ 316 (376)
|+
T Consensus 149 -pg 150 (228)
T 1h1y_A 149 -PG 150 (228)
T ss_dssp -TT
T ss_pred -CC
Confidence 54
No 49
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=85.88 E-value=1.7 Score=41.56 Aligned_cols=100 Identities=15% Similarity=0.126 Sum_probs=60.2
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCC-C---c--ccHHHHHHHHHHHHhhCCC-cEEEE-ecCCC---CCCh-HH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDL-A---D--QGSGHFAQTVRKLKELKPN-MLIEA-LVPDF---RGNN-GC 224 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl-~---d--~g~~~~~elvr~Ik~~~p~-i~Ie~-l~pd~---~g~~-e~ 224 (376)
.+.+++...+..+.+.|++.|+...||.+.. . + +|+.+-.++|+.|++.+++ ..|.+ ..|+- ..+. ..
T Consensus 83 ~~~~~l~~~L~~~~~~GI~niLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~~~~d 162 (310)
T 3apt_A 83 QSRKEVAEVLHRFVESGVENLLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYPEGHPESESLEAD 162 (310)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECTTCCTTSSCHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCCCHHHH
Confidence 5688999999999999999999999985422 1 1 2355667888888876443 56654 44531 1121 12
Q ss_pred HH---HHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHH
Q 017179 225 VR---EVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD 269 (376)
Q Consensus 225 l~---~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~ 269 (376)
++ .=.++|+|.+ |.-.-++.+.+++.++.+++
T Consensus 163 ~~~Lk~Kv~aGAdf~-------------iTQ~ffD~~~~~~f~~~~r~ 197 (310)
T 3apt_A 163 LRHFKAKVEAGLDFA-------------ITQLFFNNAHYFGFLERARR 197 (310)
T ss_dssp HHHHHHHHHHHCSEE-------------EECCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEE-------------EecccCCHHHHHHHHHHHHH
Confidence 33 3336777643 11123455666666666665
No 50
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=84.96 E-value=12 Score=39.93 Aligned_cols=136 Identities=17% Similarity=0.120 Sum_probs=89.9
Q ss_pred CCCchhHHHHHHHHHHCC--CcEEEEEeeeCCC-----CCcccHHHHHHHHHHHHhhCCCcEEEEecCC--CCC------
Q 017179 156 PPDPDEPTNVAEAIASWG--LDYVVITSVDRDD-----LADQGSGHFAQTVRKLKELKPNMLIEALVPD--FRG------ 220 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G--~~eIvLTsg~r~d-----l~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd--~~g------ 220 (376)
.++.++.+++++++.+.| +..|-+.||..-| +.+. =.+.|+.+++..|++.+..+.-. ..|
T Consensus 121 r~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e~----p~e~l~~l~~~~~~~~l~~l~R~~n~vgy~~~p~ 196 (718)
T 3bg3_A 121 RVRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYEC----PWRRLQELRELIPNIPFQMLLRGANAVGYTNYPD 196 (718)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCCC----HHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCH
T ss_pred CCCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCCC----HHHHHHHHHHHcccchHHHHhcccccccccccCC
Confidence 378999999999999985 6668887664211 1111 13467777777788877765521 111
Q ss_pred --ChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEe---c-C----CCHH
Q 017179 221 --NNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLG---C-G----ETPD 290 (376)
Q Consensus 221 --~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvG---l-G----ET~e 290 (376)
..+.++...++|+|++....-. ...+.....++.+++ .|..+...+.+. . + -+.+
T Consensus 197 ~~~~~~i~~a~~~Gvd~irIf~s~------------n~l~~l~~~i~~ak~---~G~~v~~~i~~~~d~~dp~r~~~~~e 261 (718)
T 3bg3_A 197 NVVFKFCEVAKENGMDVFRVFDSL------------NYLPNMLLGMEAAGS---AGGVVEAAISYTGDVADPSRTKYSLQ 261 (718)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECSS------------CCHHHHHHHHHHHHT---TTSEEEEEEECCSCTTCTTCCTTCHH
T ss_pred cchHHHHHHHHhcCcCEEEEEecH------------HHHHHHHHHHHHHHH---cCCeEEEEEEeeccccCCCCCCCCHH
Confidence 2456788899999987664321 124455566777777 466666666555 1 1 1678
Q ss_pred HHHHHHHHHHHcCCcEEEee
Q 017179 291 QVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 291 e~~e~L~~Lrel~vd~v~~~ 310 (376)
.+++.++.+.+.|++.|.|.
T Consensus 262 ~~~~~a~~l~~~Ga~~I~l~ 281 (718)
T 3bg3_A 262 YYMGLAEELVRAGTHILCIK 281 (718)
T ss_dssp HHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEc
Confidence 88888888999999888874
No 51
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=84.66 E-value=17 Score=34.94 Aligned_cols=138 Identities=14% Similarity=0.130 Sum_probs=81.6
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEee-eCCCCC--------cccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSV-DRDDLA--------DQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVRE 227 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg-~r~dl~--------d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~ 227 (376)
.+++++++.|+++.+.|.+.|-|=|. .||.-. +...+.+..+|+.|++.. ++.|.+=+ + +.+.++.
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~-~vpISIDT--~--~~~Va~a 120 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF-PQLISVDT--S--RPRVMRE 120 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC-CSEEEEEC--S--CHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC-CCeEEEeC--C--CHHHHHH
Confidence 57899999999999999998887442 355322 011334677778887753 45554433 2 5778888
Q ss_pred HHHcCcccccc-cccchHHHHHh----------hcCCC--CC-------------HHHHHHHHHHHHHhCCCCce---EE
Q 017179 228 VAKSGLNVFAH-NIETVEELQSA----------VRDHR--AN-------------FKQSLDVLMMAKDYVPAGTL---TK 278 (376)
Q Consensus 228 L~~aGld~i~h-~lEtv~~l~~~----------vr~r~--~t-------------~e~~L~vl~~ak~~~p~Gi~---tk 278 (376)
-.++|.+.+|- +-+..+++++- |..++ .+ .+...+.++.|.+ .|+. +-
T Consensus 121 Al~aGa~iINDVsg~~~~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~---~GI~~~~Ii 197 (314)
T 3tr9_A 121 AVNTGADMINDQRALQLDDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKK---AGISEDRII 197 (314)
T ss_dssp HHHHTCCEEEETTTTCSTTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHH---TTCCGGGEE
T ss_pred HHHcCCCEEEECCCCCchHHHHHHHHhCCeEEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHH---cCCCHhHEE
Confidence 88889887743 12222233332 12111 11 2333445566666 4653 33
Q ss_pred EeEEEe---cCCCHHHHHHHHHHHHHc
Q 017179 279 TSIMLG---CGETPDQVVSTMEKVRAA 302 (376)
Q Consensus 279 t~imvG---lGET~ee~~e~L~~Lrel 302 (376)
-+--+| ||.|.++=+++|+.|+++
T Consensus 198 lDPG~G~~~F~Kt~~~n~~lL~~l~~l 224 (314)
T 3tr9_A 198 IDPGFGQGNYGKNVSENFYLLNKLPEF 224 (314)
T ss_dssp EECCCCSGGGCCCHHHHHHHHHTTHHH
T ss_pred EeCCCCchhhcCCHHHHHHHHHHHHHH
Confidence 333458 889998777777666554
No 52
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=84.58 E-value=21 Score=36.14 Aligned_cols=134 Identities=16% Similarity=0.228 Sum_probs=82.9
Q ss_pred hhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
++..+.++++.+.|++.|+|.+.... ...+.+.|+.+++.+|++.|-+ ++. .+.+..+.+.++|+|.+-.+
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g~------~~~~~~~v~~i~~~~p~~~Vi~--g~v-~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHGH------SKGVIERVRWVKQTFPDVQVIG--GNI-ATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCCS------BHHHHHHHHHHHHHCTTSEEEE--EEE-CSHHHHHHHHHTTCSEEEEC
T ss_pred cchHHHHHHHhhcccceEEecccCCc------chhHHHHHHHHHHHCCCceEEE--eee-CcHHHHHHHHHcCCCEEEEC
Confidence 45677888999999999999765421 3467899999999988765533 211 15788899999999988653
Q ss_pred cc-chHHHHHhhcCC-CCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHHHcCCcEEEeecCC
Q 017179 240 IE-TVEELQSAVRDH-RANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (376)
Q Consensus 240 lE-tv~~l~~~vr~r-~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlG-ET~ee~~e~L~~Lrel~vd~v~~~qY~ 313 (376)
.. ...-..+.+..- ...++...++.+.+++ .+++ +|..-| -+.+|+.+.+. +|.+.|-+|..+
T Consensus 299 ~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~---~~iP----VIa~GGI~~~~di~kal~----~GAd~V~vGs~~ 364 (490)
T 4avf_A 299 IGPGSICTTRIVAGVGVPQISAIANVAAALEG---TGVP----LIADGGIRFSGDLAKAMV----AGAYCVMMGSMF 364 (490)
T ss_dssp SSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTT---TTCC----EEEESCCCSHHHHHHHHH----HTCSEEEECTTT
T ss_pred CCCCcCCCccccCCCCccHHHHHHHHHHHhcc---CCCc----EEEeCCCCCHHHHHHHHH----cCCCeeeecHHH
Confidence 21 111111112111 2234444444444433 1343 233222 48888888774 589999998665
No 53
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=84.40 E-value=9.9 Score=38.58 Aligned_cols=131 Identities=17% Similarity=0.258 Sum_probs=83.7
Q ss_pred hhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
++..+.++++.+.|++.|+|.+.... ...+.+.|+.|++.+|++.|-+ +.. .+.+..+.+.++|+|.+-.+
T Consensus 230 ~d~~~~a~~l~~aG~d~I~id~a~g~------~~~~~~~i~~ir~~~p~~~Vi~--g~v-~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 230 PGNEERVKALVEAGVDVLLIDSSHGH------SEGVLQRIRETRAAYPHLEIIG--GNV-ATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp SCCHHHHHHHHHTTCSEEEEECSCTT------SHHHHHHHHHHHHHCTTCCEEE--EEE-CSHHHHHHHHHHTCSEEEEC
T ss_pred cchHHHHHHHHhccCceEEecccccc------chHHHHHHHHHHHHCCCceEEE--ccc-CcHHHHHHHHHhCCCEEEEC
Confidence 44567788888999999999876421 3567899999999988765433 111 15678899999999988643
Q ss_pred -----ccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHHHcCCcEEEeecCC
Q 017179 240 -----IETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (376)
Q Consensus 240 -----lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lrel~vd~v~~~qY~ 313 (376)
.-+. +...-+. ...+....++.+.+++. +++ +|..- --+.+|+.+.+. +|.+.|-+|..+
T Consensus 301 ~g~Gs~~~t-r~~~g~g--~p~~~~i~~v~~~~~~~---~iP----VIa~GGI~~~~di~kala----~GAd~V~iGs~f 366 (496)
T 4fxs_A 301 IGPGSICTT-RIVTGVG--VPQITAIADAAGVANEY---GIP----VIADGGIRFSGDISKAIA----AGASCVMVGSMF 366 (496)
T ss_dssp SSCCTTBCH-HHHHCCC--CCHHHHHHHHHHHHGGG---TCC----EEEESCCCSHHHHHHHHH----TTCSEEEESTTT
T ss_pred CCCCcCccc-ccccCCC--ccHHHHHHHHHHHhccC---CCe----EEEeCCCCCHHHHHHHHH----cCCCeEEecHHH
Confidence 1121 2211121 23455555666665552 343 33322 257888887764 689999898665
No 54
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=84.23 E-value=14 Score=32.90 Aligned_cols=122 Identities=18% Similarity=0.227 Sum_probs=73.2
Q ss_pred CCch--hHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEE-EEecCCC------C-CChHHHH
Q 017179 157 PDPD--EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLI-EALVPDF------R-GNNGCVR 226 (376)
Q Consensus 157 l~~e--Ei~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~I-e~l~pd~------~-g~~e~l~ 226 (376)
..++ ++.+.++++.+.|+..+.+.+ . +.++.|++.. ++.+ .+...+| . ...+.++
T Consensus 31 ~~~~~~~~~~~a~~~~~~G~~~i~~~~----------~----~~i~~i~~~~-~~p~i~~~~~~~~~~~~~i~~~~~~i~ 95 (234)
T 1yxy_A 31 YSETGGIMPLMAKAAQEAGAVGIRANS----------V----RDIKEIQAIT-DLPIIGIIKKDYPPQEPFITATMTEVD 95 (234)
T ss_dssp CCTTCCSHHHHHHHHHHHTCSEEEEES----------H----HHHHHHHTTC-CSCEEEECBCCCTTSCCCBSCSHHHHH
T ss_pred cCCccchHHHHHHHHHHCCCcEeecCC----------H----HHHHHHHHhC-CCCEEeeEcCCCCccccccCChHHHHH
Confidence 4567 889999999999999887631 1 3467777654 2333 2222221 1 1457899
Q ss_pred HHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcE
Q 017179 227 EVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDV 306 (376)
Q Consensus 227 ~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~ 306 (376)
.+.++|+|.+....+... ++.+. ...++++.+++.+| |+. ++++. .|.++ +..+.+.++|+
T Consensus 96 ~~~~~Gad~V~l~~~~~~------~~~~~---~~~~~i~~i~~~~~-~~~----v~~~~-~t~~e----a~~a~~~Gad~ 156 (234)
T 1yxy_A 96 QLAALNIAVIAMDCTKRD------RHDGL---DIASFIRQVKEKYP-NQL----LMADI-STFDE----GLVAHQAGIDF 156 (234)
T ss_dssp HHHTTTCSEEEEECCSSC------CTTCC---CHHHHHHHHHHHCT-TCE----EEEEC-SSHHH----HHHHHHTTCSE
T ss_pred HHHHcCCCEEEEcccccC------CCCCc---cHHHHHHHHHHhCC-CCe----EEEeC-CCHHH----HHHHHHcCCCE
Confidence 999999998865544211 11011 23567777777654 343 22232 45555 55567789999
Q ss_pred E--EeecC
Q 017179 307 M--TFGQY 312 (376)
Q Consensus 307 v--~~~qY 312 (376)
+ +++.+
T Consensus 157 i~~~v~g~ 164 (234)
T 1yxy_A 157 VGTTLSGY 164 (234)
T ss_dssp EECTTTTS
T ss_pred Eeeecccc
Confidence 9 55433
No 55
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=83.91 E-value=3.3 Score=42.83 Aligned_cols=135 Identities=16% Similarity=0.166 Sum_probs=82.4
Q ss_pred hhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
++-.+.++++.+.|++-|+|-+-+ +-..+..++++.||+.+|++.|-+ +.. .+.+..+.|.++|+|.+-.+
T Consensus 280 ~d~~eR~~aLv~AGvD~iviD~ah------Ghs~~v~~~i~~ik~~~p~~~via--GNV-aT~e~a~~Li~aGAD~vkVG 350 (556)
T 4af0_A 280 PGDKDRLKLLAEAGLDVVVLDSSQ------GNSVYQIEFIKWIKQTYPKIDVIA--GNV-VTREQAAQLIAAGADGLRIG 350 (556)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSC------CCSHHHHHHHHHHHHHCTTSEEEE--EEE-CSHHHHHHHHHHTCSEEEEC
T ss_pred ccHHHHHHHHHhcCCcEEEEeccc------cccHHHHHHHHHHHhhCCcceEEe--ccc-cCHHHHHHHHHcCCCEEeec
Confidence 345678899999999999985543 335789999999999999876532 221 16788999999999998655
Q ss_pred ccc-hHHHHHhhcCC-CCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecCC
Q 017179 240 IET-VEELQSAVRDH-RANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (376)
Q Consensus 240 lEt-v~~l~~~vr~r-~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY~ 313 (376)
+=. +--..+.+..- .....-.+++-+.+++. |+++-++- | --+.-|+...| ..|-|.|-+|-+|
T Consensus 351 iGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~---~vpvIADG--G-I~~sGDi~KAl----aaGAd~VMlGsll 416 (556)
T 4af0_A 351 MGSGSICITQEVMAVGRPQGTAVYAVAEFASRF---GIPCIADG--G-IGNIGHIAKAL----ALGASAVMMGGLL 416 (556)
T ss_dssp SSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGG---TCCEEEES--C-CCSHHHHHHHH----HTTCSEEEESTTT
T ss_pred CCCCcccccccccCCCCcHHHHHHHHHHHHHHc---CCCEEecC--C-cCcchHHHHHh----hcCCCEEEEchhh
Confidence 421 11111222211 12244455666666664 45443332 1 13555555544 3566666666555
No 56
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=83.82 E-value=11 Score=35.88 Aligned_cols=120 Identities=15% Similarity=0.224 Sum_probs=77.0
Q ss_pred HHhhCCCcEEEEecCCC--CC--C----hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCC
Q 017179 202 LKELKPNMLIEALVPDF--RG--N----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPA 273 (376)
Q Consensus 202 Ik~~~p~i~Ie~l~pd~--~g--~----~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~ 273 (376)
++..+.++..-+++|-- .+ | ...++.+.++|+|.+-.+=-|-+- ..-+.+++.++++.+.+....
T Consensus 8 ~~~~~~Gv~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~eEr~~v~~~~v~~~~g 80 (316)
T 3e96_A 8 LAKALETISGIPITPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEF-------YALSLEEAKEEVRRTVEYVHG 80 (316)
T ss_dssp HHHHTSSEEECCCCCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTG-------GGSCHHHHHHHHHHHHHHHTT
T ss_pred hhhcCCceEEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCc-------ccCCHHHHHHHHHHHHHHhCC
Confidence 34445566666666632 22 3 345667778888765433222221 135689999999999886432
Q ss_pred CceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEee-cCCCCCCCCCCCcccCC-hHHHHHHHHHHHHHh
Q 017179 274 GTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG-QYMRPSKRHMPVSEYIT-PEAFERYRALGMEMG 342 (376)
Q Consensus 274 Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~-qY~~P~~~~~~v~~~v~-pe~~~~l~~~a~~~g 342 (376)
+.-+|+|.|.+-+|.++..+...++|+|.+-+. +|+.+ .+ .+-+++++.+|...+
T Consensus 81 ----rvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~y~~----------~s~~~l~~~f~~va~a~~ 137 (316)
T 3e96_A 81 ----RALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPIHPY----------VTAGGVYAYFRDIIEALD 137 (316)
T ss_dssp ----SSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCCCSC----------CCHHHHHHHHHHHHHHHT
T ss_pred ----CCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCCCCC----------CCHHHHHHHHHHHHHhCC
Confidence 345788887799999999999999999987663 33211 12 234666777777654
No 57
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=83.70 E-value=6.5 Score=37.39 Aligned_cols=139 Identities=14% Similarity=0.104 Sum_probs=85.6
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEee-eCCCCCc----ccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHH
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSV-DRDDLAD----QGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK 230 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg-~r~dl~d----~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~ 230 (376)
..+++++++.|+++.+.|.+.|-|=|. .|+.... ...+.+..+|+.|++. ++.|.+=+ + +.+.++.-.+
T Consensus 42 ~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~--~vpiSIDT--~--~~~Va~aAl~ 115 (294)
T 2y5s_A 42 FLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL--NVPLSIDT--Y--KPAVMRAALA 115 (294)
T ss_dssp --CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG--CSCEEEEC--C--CHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC--CCeEEEEC--C--CHHHHHHHHH
Confidence 368899999999999999999988552 3554221 1245677777777654 45454322 2 5677887778
Q ss_pred cCcccccc-cccchHHHHHh----------hcCC----C-------C-C-----HHHHHHHHHHHHHhCCCCce---EEE
Q 017179 231 SGLNVFAH-NIETVEELQSA----------VRDH----R-------A-N-----FKQSLDVLMMAKDYVPAGTL---TKT 279 (376)
Q Consensus 231 aGld~i~h-~lEtv~~l~~~----------vr~r----~-------~-t-----~e~~L~vl~~ak~~~p~Gi~---tkt 279 (376)
+|.+.+|- +-+..+++++- |+.+ . | + .+...+.++.+.+ .|+. +--
T Consensus 116 aGa~iINdVsg~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~---~Gi~~~~Iil 192 (294)
T 2y5s_A 116 AGADLINDIWGFRQPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRD---AGVAAERICV 192 (294)
T ss_dssp HTCSEEEETTTTCSTTHHHHHSSSSCEEEEECCCEETTTTEECCCCCSSHHHHHHHHHHHHHHHHHH---TTCCGGGEEE
T ss_pred cCCCEEEECCCCCchHHHHHHHHhCCCEEEECCCCCCccccccCCccccHHHHHHHHHHHHHHHHHH---cCCChhhEEE
Confidence 88887753 22222344433 1111 1 1 0 2333445566666 4654 555
Q ss_pred eEEEecCCCH-HHHHHHHHHHHHcC
Q 017179 280 SIMLGCGETP-DQVVSTMEKVRAAG 303 (376)
Q Consensus 280 ~imvGlGET~-ee~~e~L~~Lrel~ 303 (376)
+--+|||.|. ++-+++|+.++++.
T Consensus 193 DPG~Gf~kt~~~~n~~ll~~l~~l~ 217 (294)
T 2y5s_A 193 DPGFGFGKAVVDDNYALLAALPDTA 217 (294)
T ss_dssp ECCTTSSSCTTHHHHHHHHTGGGGS
T ss_pred eCCCcccccchHHHHHHHHHHHHHH
Confidence 6566889999 98888888888765
No 58
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=83.70 E-value=13 Score=33.67 Aligned_cols=48 Identities=17% Similarity=0.255 Sum_probs=31.1
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHH
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLK 203 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik 203 (376)
..++++.++.++++.+.|++.|++|-=...+..+...+.+.+.+..++
T Consensus 20 ~~~~e~~~e~i~~A~~~Gi~~i~~TdH~~~~~~~~~~~~~~~~~~~l~ 67 (247)
T 2wje_A 20 PKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVR 67 (247)
T ss_dssp CSSHHHHHHHHHHHHHTTEEEEECCCEEBTTTBCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH
Confidence 456889999999999999999999964332222222333444444443
No 59
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=83.36 E-value=11 Score=35.94 Aligned_cols=139 Identities=14% Similarity=0.219 Sum_probs=83.3
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEee-eCCCCCcc----cHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSV-DRDDLADQ----GSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS 231 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg-~r~dl~d~----g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a 231 (376)
.+++++++.|++..+.|.+.|-|-+. .|+....- -.+.+..+|+.|++.. ++.|.+=+ + +.+.++.-.++
T Consensus 60 ~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~-~vpiSIDT--~--~~~V~~aAl~a 134 (297)
T 1tx2_A 60 NEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV-KLPISIDT--Y--KAEVAKQAIEA 134 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS-CSCEEEEC--S--CHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC-CceEEEeC--C--CHHHHHHHHHc
Confidence 57899999999999999999988653 34432211 1345666778887654 34444322 2 57888888888
Q ss_pred Cccccccc-ccc-hHHHHHh----------hcCCC-CC--------HHHHHHHHHHHHHhCCCCce---EEEeEEEecCC
Q 017179 232 GLNVFAHN-IET-VEELQSA----------VRDHR-AN--------FKQSLDVLMMAKDYVPAGTL---TKTSIMLGCGE 287 (376)
Q Consensus 232 Gld~i~h~-lEt-v~~l~~~----------vr~r~-~t--------~e~~L~vl~~ak~~~p~Gi~---tkt~imvGlGE 287 (376)
|.+.+|.- .+. .+++++- |..++ .. .+...+.++.+.+ .|+. +--+-.+|||-
T Consensus 135 Ga~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~~G~p~y~d~v~ev~~~l~~~i~~a~~---~GI~~~~IilDPg~Gfgk 211 (297)
T 1tx2_A 135 GAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKD---AGVRDENIILDPGIGFAK 211 (297)
T ss_dssp TCCEEEETTTTSSCTHHHHHHHHHTCCEEEECCCSCCCCSSHHHHHHHHHHHHHHHHHH---TTCCGGGEEEECCTTSSC
T ss_pred CCCEEEECCCCCCCHHHHHHHHHhCCcEEEEeCCCCCCcchHHHHHHHHHHHHHHHHHH---cCCChhcEEEeCCCCcCC
Confidence 99988652 222 2344332 11111 11 2333445556665 4654 55566668899
Q ss_pred CHHHHHHHHHHHHHcC
Q 017179 288 TPDQVVSTMEKVRAAG 303 (376)
Q Consensus 288 T~ee~~e~L~~Lrel~ 303 (376)
+.++-+++|+.++++.
T Consensus 212 ~~~~n~~ll~~l~~l~ 227 (297)
T 1tx2_A 212 TPEQNLEAMRNLEQLN 227 (297)
T ss_dssp CHHHHHHHHHTGGGGG
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9997777777766543
No 60
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=82.91 E-value=1.3 Score=40.12 Aligned_cols=75 Identities=9% Similarity=0.105 Sum_probs=50.3
Q ss_pred hHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccc
Q 017179 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNI 240 (376)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~l 240 (376)
++.+.++.+.+.|++.+.+..-+.... +...+ +.+++|++.. ++.+.+ .....+++.++.+.++|+|.+..+.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~---~~~~~-~~i~~i~~~~-~ipv~v--~ggI~~~~~~~~~l~~Gad~V~lg~ 105 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFG---TGDNR-ALIAEVAQAM-DIKVEL--SGGIRDDDTLAAALATGCTRVNLGT 105 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHT---SCCCH-HHHHHHHHHC-SSEEEE--ESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhc---CCChH-HHHHHHHHhc-CCcEEE--ECCcCCHHHHHHHHHcCCCEEEECc
Confidence 778888999999999999875332110 11125 7888888765 344432 2222267889999999999887764
Q ss_pred cc
Q 017179 241 ET 242 (376)
Q Consensus 241 Et 242 (376)
+.
T Consensus 106 ~~ 107 (244)
T 1vzw_A 106 AA 107 (244)
T ss_dssp HH
T ss_pred hH
Confidence 43
No 61
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=82.31 E-value=20 Score=32.94 Aligned_cols=119 Identities=16% Similarity=0.135 Sum_probs=73.3
Q ss_pred hhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
..+.+.|++..+.|..-|.+. +.+.+..+.. +.++.|++.. ++. ++..||.-++..+....++|+|.+..+
T Consensus 65 ~~p~~~A~~~~~~GA~~isvl--t~~~~f~G~~----~~l~~i~~~v-~lP--vl~kdfI~d~~qi~~a~~~GAD~VlL~ 135 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSVL--TEPHRFGGSL----LDLKRVREAV-DLP--LLRKDFVVDPFMLEEARAFGASAALLI 135 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEEE--CCCSSSCCCH----HHHHHHHHHC-CSC--EEEESCCCSHHHHHHHHHTTCSEEEEE
T ss_pred CCHHHHHHHHHHcCCCEEEEe--cchhhhccCH----HHHHHHHHhc-CCC--EEECCcCCCHHHHHHHHHcCCCEEEEC
Confidence 778999999999999998773 2223332222 3445555543 233 356788767778888999999988764
Q ss_pred ccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecC
Q 017179 240 IETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (376)
Q Consensus 240 lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY 312 (376)
....+ ++.-++++.++++ |+.+...+ .+++|.. ...+++.+++.+.+.
T Consensus 136 ~~~l~-------------~~l~~l~~~a~~l---Gl~~lvev-----~~~~E~~----~a~~~gad~IGvn~~ 183 (254)
T 1vc4_A 136 VALLG-------------ELTGAYLEEARRL---GLEALVEV-----HTERELE----IALEAGAEVLGINNR 183 (254)
T ss_dssp HHHHG-------------GGHHHHHHHHHHH---TCEEEEEE-----CSHHHHH----HHHHHTCSEEEEESB
T ss_pred ccchH-------------HHHHHHHHHHHHC---CCeEEEEE-----CCHHHHH----HHHHcCCCEEEEccc
Confidence 32111 2233556666664 55443222 3556543 445567899998754
No 62
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=82.16 E-value=6.1 Score=36.60 Aligned_cols=80 Identities=18% Similarity=0.284 Sum_probs=51.8
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCccc---------------HHHHHHHHHHHHhhCCCcEEEEec---CCC
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQG---------------SGHFAQTVRKLKELKPNMLIEALV---PDF 218 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g---------------~~~~~elvr~Ik~~~p~i~Ie~l~---pd~ 218 (376)
.+.++..+.++++.+.|++.|.|-.--.+.+-|+. .....+++++|++.++++.|.++. |-+
T Consensus 28 p~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~ 107 (268)
T 1qop_A 28 PGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVF 107 (268)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHH
Confidence 34578889999999999999988432222223331 133457899999874445555432 212
Q ss_pred -CCChHHHHHHHHcCcccc
Q 017179 219 -RGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 219 -~g~~e~l~~L~~aGld~i 236 (376)
.+..+.++.+.++|+|.+
T Consensus 108 ~~g~~~~~~~~~~aGadgi 126 (268)
T 1qop_A 108 NNGIDAFYARCEQVGVDSV 126 (268)
T ss_dssp TTCHHHHHHHHHHHTCCEE
T ss_pred HhhHHHHHHHHHHcCCCEE
Confidence 133677899999999944
No 63
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=82.08 E-value=22 Score=37.44 Aligned_cols=142 Identities=11% Similarity=0.085 Sum_probs=88.3
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhC---CCcEEEEecCCCCC-ChHHHHHHHHc
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK---PNMLIEALVPDFRG-NNGCVREVAKS 231 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~---p~i~Ie~l~pd~~g-~~e~l~~L~~a 231 (376)
.++.+|-++++++|.++|+++|-... +... ... .+.++.|.+.. ++..|.+|.+...+ .+..++.++.+
T Consensus 89 ~~s~eeKl~Ia~~L~~lGVd~IEaGf---P~as---p~D-~e~v~~i~~~~l~~~~~~i~aL~r~~~~did~a~eal~~a 161 (644)
T 3hq1_A 89 PMSPARKRRMFDLLVRMGYKEIEVGF---PSAS---QTD-FDFVREIIEQGAIPDDVTIQVLTQCRPELIERTFQACSGA 161 (644)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEC---TTTC---HHH-HHHHHHHHHTTCSCTTCEEEEEEESCHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeC---CCCC---hhH-HHHHHHHHhcCCCCCCeEEEEEecCCHhhHHHHHHHHhcC
Confidence 58999999999999999999998754 2111 111 34566666542 47888888874321 12345567788
Q ss_pred CcccccccccchH-HHHHhhcCCCCCHHHHHHHHH----HHHHhCCCCceEEEeEEEec-CC-----CHHHHHHHHHHHH
Q 017179 232 GLNVFAHNIETVE-ELQSAVRDHRANFKQSLDVLM----MAKDYVPAGTLTKTSIMLGC-GE-----TPDQVVSTMEKVR 300 (376)
Q Consensus 232 Gld~i~h~lEtv~-~l~~~vr~r~~t~e~~L~vl~----~ak~~~p~Gi~tkt~imvGl-GE-----T~ee~~e~L~~Lr 300 (376)
+.+.+...+-+++ -+...+ +.+.++.++.+. .+++.... . +.+++-+=| +| ..+-+++.++.+.
T Consensus 162 ~~~~Vhif~stSd~h~~~~l---~~s~eevle~~~~~v~~a~~~~~~-~-~~~~~~v~fs~Edasrtd~dfl~ev~~aa~ 236 (644)
T 3hq1_A 162 PRAIVHFYNSTSILQRRVVF---RANRAEVQAIATDGARKCVEQAAK-Y-PGTQWRFEYSPESYTGTELEYAKQVCDAVG 236 (644)
T ss_dssp SEEEEEEEEECCHHHHHHTT---CCCHHHHHHHHHHHHHHHHHHHHH-S-CSSEEEEEEEEETGGGSCHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCHHHHHHHh---CCCHHHHHHHHHHHHHHHHHHhhh-c-cCceEEEEEcCcccCCCCHHHHHHHHHHHH
Confidence 9888888888887 333333 467888887654 33342101 1 122333333 44 4566668888888
Q ss_pred Hc---CCc---EEEe
Q 017179 301 AA---GVD---VMTF 309 (376)
Q Consensus 301 el---~vd---~v~~ 309 (376)
+. +.+ .+.|
T Consensus 237 eaG~~Gad~~~~I~L 251 (644)
T 3hq1_A 237 EVIAPTPERPIIFNL 251 (644)
T ss_dssp HHHCCCSSSCEEEEE
T ss_pred HhcCCCCCceeEEEe
Confidence 75 456 4554
No 64
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=81.06 E-value=3.6 Score=39.64 Aligned_cols=88 Identities=11% Similarity=0.160 Sum_probs=58.4
Q ss_pred EEEEeeeCCccCCCCcCCCCCCC--CCCC-CCCchhHHHHHHHHHHCCCcEEEEEeeeCCC-CCcccHHHHHHHHHHHHh
Q 017179 129 TATIMILGDTCTRGCRFCNVKTS--RAPP-PPDPDEPTNVAEAIASWGLDYVVITSVDRDD-LADQGSGHFAQTVRKLKE 204 (376)
Q Consensus 129 tat~m~i~d~C~~~C~FC~v~~~--r~~~-~l~~eEi~~~a~al~~~G~~eIvLTsg~r~d-l~d~g~~~~~elvr~Ik~ 204 (376)
.-||..+.+.|.-.|.-+.-... ..|. +++|+||.+.|.+..+.|..-|+|=.=+.+| -+....+.|.+++..|++
T Consensus 14 ~~~~~~~~~kviIt~A~tGa~~t~~~~P~lPvTpeEIa~~A~~a~~AGAaivHlHvRd~~~G~ps~d~~~y~e~~~~IR~ 93 (316)
T 3c6c_A 14 NLYFQGMSRKVILTCAVTGNAPFNPKHPSMPITPAQIADACVEAAKAGASVAHIHVRDPKTGGGSRDPVLFKEVVDRVRS 93 (316)
T ss_dssp -------CCEECEEEECCCSSCCCTTSTTCCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHT
T ss_pred cccccCCCCCeEEEEecCCCcCCccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHH
Confidence 44555566666666765544322 3343 6899999999999999999888875444212 222237889999999998
Q ss_pred hCCCcEEEEecC
Q 017179 205 LKPNMLIEALVP 216 (376)
Q Consensus 205 ~~p~i~Ie~l~p 216 (376)
..|++.|.+.++
T Consensus 94 ~~~d~ii~~TTg 105 (316)
T 3c6c_A 94 SGTDIVLNLTCG 105 (316)
T ss_dssp TTCCCEEEEECC
T ss_pred HCCCeEEEeCCC
Confidence 878999988775
No 65
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=81.05 E-value=14 Score=35.47 Aligned_cols=83 Identities=18% Similarity=0.185 Sum_probs=56.6
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeC-CCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCC--CChHHHHHHHHcC
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDR-DDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFR--GNNGCVREVAKSG 232 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r-~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~--g~~e~l~~L~~aG 232 (376)
+++++||.+.|.+..+.|..-|+|=.=+. +.-+....+.|.+++..|++..| +.|.+.++.-. ..++.+..+.+..
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d-~iI~~TTgg~~~~~~eerla~~~~~~ 106 (311)
T 3e49_A 28 PVTPDEVAQASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKSNTD-AVINLTTGGSPHMTVEERLRPATHYM 106 (311)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHHHCC-CEEEECSCSCTTSCHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCC-cEEEECCCCCCCCCHHHHHHHHHhcC
Confidence 69999999999999999998777754332 12222236789999999999875 66666554211 1345566666656
Q ss_pred ccccccc
Q 017179 233 LNVFAHN 239 (376)
Q Consensus 233 ld~i~h~ 239 (376)
+|....|
T Consensus 107 Pe~aSln 113 (311)
T 3e49_A 107 PELASLN 113 (311)
T ss_dssp CSEEEEE
T ss_pred CCeeeec
Confidence 7665444
No 66
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=80.58 E-value=18 Score=36.71 Aligned_cols=132 Identities=16% Similarity=0.258 Sum_probs=83.2
Q ss_pred hhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
++..+.++++.+.|++.|+|.+.+. ....+.++|+.|++.+|++.|-+ .+. .+.+..+.+.++|+|.+-.+
T Consensus 255 ~d~~era~aLveaGvd~I~Id~a~g------~~~~v~~~i~~i~~~~~~~~vi~--g~v-~t~e~a~~~~~aGad~i~vg 325 (511)
T 3usb_A 255 ADAMTRIDALVKASVDAIVLDTAHG------HSQGVIDKVKEVRAKYPSLNIIA--GNV-ATAEATKALIEAGANVVKVG 325 (511)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCT------TSHHHHHHHHHHHHHCTTSEEEE--EEE-CSHHHHHHHHHHTCSEEEEC
T ss_pred cchHHHHHHHHhhccceEEeccccc------chhhhhhHHHHHHHhCCCceEEe--eee-ccHHHHHHHHHhCCCEEEEC
Confidence 4567778899999999999986542 24568899999999988754432 111 15778899999999988543
Q ss_pred ccc-h---HHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHHHcCCcEEEeecCC
Q 017179 240 IET-V---EELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (376)
Q Consensus 240 lEt-v---~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lrel~vd~v~~~qY~ 313 (376)
+.. . .+...-+. ..++....++.+.+++. +++ +|..- --+.+|+.+.+. +|.+.|-+|..+
T Consensus 326 ~g~gsi~~~~~~~g~g--~p~~~~l~~v~~~~~~~---~iP----VIa~GGI~~~~di~kala----~GA~~V~vGs~~ 391 (511)
T 3usb_A 326 IGPGSICTTRVVAGVG--VPQLTAVYDCATEARKH---GIP----VIADGGIKYSGDMVKALA----AGAHVVMLGSMF 391 (511)
T ss_dssp SSCSTTCCHHHHHCCC--CCHHHHHHHHHHHHHTT---TCC----EEEESCCCSHHHHHHHHH----TTCSEEEESTTT
T ss_pred CCCccccccccccCCC--CCcHHHHHHHHHHHHhC---CCc----EEEeCCCCCHHHHHHHHH----hCchhheecHHH
Confidence 321 1 12211121 22344444555555542 333 33322 258888887764 799999998665
No 67
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=80.40 E-value=11 Score=42.23 Aligned_cols=79 Identities=22% Similarity=0.212 Sum_probs=57.3
Q ss_pred CCchhHHHHHHHHHHC--CCcEEEEEeeeCC-----CCCcccHHHHHHHHHHHHhhCCCcEEEEec--CCCCC-------
Q 017179 157 PDPDEPTNVAEAIASW--GLDYVVITSVDRD-----DLADQGSGHFAQTVRKLKELKPNMLIEALV--PDFRG------- 220 (376)
Q Consensus 157 l~~eEi~~~a~al~~~--G~~eIvLTsg~r~-----dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~--pd~~g------- 220 (376)
++.++.+.+++++.+. |+..+-..||+.- -+.+. =.+.++.|++..|++.+..+. ++..|
T Consensus 552 ~~~~~kl~ia~~L~~~~~G~~~lE~~Gga~~e~~~~~~~e~----~~e~l~~l~~~~~~~~~~~l~R~~n~vgy~~~pd~ 627 (1150)
T 3hbl_A 552 VRTKDMINIASKTADVFKDGFSLEMWGGATFDVAYNFLKEN----PWERLERLRKAIPNVLFQMLLRASNAVGYKNYPDN 627 (1150)
T ss_dssp CCHHHHHHHHHHHHHHTTTCSEEEEEETTHHHHHHHTSCCC----HHHHHHHHHHHCCSSEEEEEEETTTBTCSSCCCHH
T ss_pred CCHHHHHHHHHHHHHhhCCCcEEeecCCceEEecccccCCC----HHHHHHHHHHhCCCCeEEEEeccccccccccCCch
Confidence 7899999999999998 9999998887521 11111 136778888888999988877 22222
Q ss_pred -ChHHHHHHHHcCccccccc
Q 017179 221 -NNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 221 -~~e~l~~L~~aGld~i~h~ 239 (376)
..+.++...++|+|++...
T Consensus 628 v~~~~v~~a~~~Gvd~irif 647 (1150)
T 3hbl_A 628 VIHKFVQESAKAGIDVFRIF 647 (1150)
T ss_dssp HHHHHHHHHHHTTCCEEEEE
T ss_pred hHHHHHHHHHhCCcCEEEEE
Confidence 2445788889999988664
No 68
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=79.71 E-value=14 Score=35.29 Aligned_cols=83 Identities=17% Similarity=0.152 Sum_probs=56.7
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeC-CCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCC--CChHHHHHHHHcC
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDR-DDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFR--GNNGCVREVAKSG 232 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r-~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~--g~~e~l~~L~~aG 232 (376)
+++++||.+.|.+..+.|..-|+|=.=+. +.-+....+.|.+++..|++..| +.|.+.++.-. ..++.+..+.+..
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d-~iI~~TTgg~~~~~~eerla~~~~~~ 106 (311)
T 3e02_A 28 PITPEEIVKEGVAAAEAGAAMLHLHARDPLNGRPSQDPDLFMRFLPQLKERTD-AILNITTGGGLGMSLDERLAPARAAR 106 (311)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTTHHHHHHHCC-CEEEECSSCSTTCCHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCC-cEEEECCCCCCCCCHHHHHHHHHhcC
Confidence 69999999999999999998877754432 12222236789999999999875 66666554211 1355666666656
Q ss_pred ccccccc
Q 017179 233 LNVFAHN 239 (376)
Q Consensus 233 ld~i~h~ 239 (376)
+|....|
T Consensus 107 Pe~aSln 113 (311)
T 3e02_A 107 PEVASMN 113 (311)
T ss_dssp CSEEEEE
T ss_pred CCeeeec
Confidence 7765444
No 69
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=79.37 E-value=7.4 Score=40.10 Aligned_cols=101 Identities=11% Similarity=0.093 Sum_probs=52.7
Q ss_pred CCCcCCCCCCCCCCCCCCchhHHHHHHHHHHCCCcEEEEEeeeCCC-CCcccHHHHHHHHHHHHhhCCCcEEEE--ecCC
Q 017179 141 RGCRFCNVKTSRAPPPPDPDEPTNVAEAIASWGLDYVVITSVDRDD-LADQGSGHFAQTVRKLKELKPNMLIEA--LVPD 217 (376)
Q Consensus 141 ~~C~FC~v~~~r~~~~l~~eEi~~~a~al~~~G~~eIvLTsg~r~d-l~d~g~~~~~elvr~Ik~~~p~i~Ie~--l~pd 217 (376)
.+=.||.-............+|.+.|+++.+.|.+++++.=-+... .+ .+.....++|++|++.. .+.|.+ -+.+
T Consensus 261 kg~~~~vr~~~g~~~~~~~~dp~~~A~~~~~~Ga~~l~~~dl~~~~~~~-~~~~~~~~~i~~i~~~~-~ipi~vgGGIr~ 338 (555)
T 1jvn_A 261 KGDQYDVREKSDGKGVRNLGKPVQLAQKYYQQGADEVTFLNITSFRDCP-LKDTPMLEVLKQAAKTV-FVPLTVGGGIKD 338 (555)
T ss_dssp TTC---------------CHHHHHHHHHHHHTTCSEEEEEEEC---CCC-GGGCHHHHHHHHHTTTC-CSCEEEESSCSC
T ss_pred ccceeeEEecccccCceEcCCHHHHHHHHHHcCCCEEEEEeCCcccccc-CCCchHHHHHHHHHhhC-CCcEEEeCcccc
Confidence 3445664432111112445689999999999999999886433210 01 01123567888887754 233332 1122
Q ss_pred CC-------CChHHHHHHHHcCcccccccccch
Q 017179 218 FR-------GNNGCVREVAKSGLNVFAHNIETV 243 (376)
Q Consensus 218 ~~-------g~~e~l~~L~~aGld~i~h~lEtv 243 (376)
+. ...+.++.+.++|+|.+..+-..+
T Consensus 339 ~~d~~~~~~~~~~~a~~~l~aGad~V~igt~~~ 371 (555)
T 1jvn_A 339 IVDVDGTKIPALEVASLYFRSGADKVSIGTDAV 371 (555)
T ss_dssp EECTTCCEECHHHHHHHHHHHTCSEEEECHHHH
T ss_pred chhcccccchHHHHHHHHHHcCCCEEEECCHHh
Confidence 10 013778999999999988875543
No 70
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=78.54 E-value=34 Score=29.96 Aligned_cols=154 Identities=12% Similarity=0.108 Sum_probs=87.5
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEE-EEecCCC------C-CChHHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLI-EALVPDF------R-GNNGCVREV 228 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~I-e~l~pd~------~-g~~e~l~~L 228 (376)
.+.+.+.+.++++.+.|...+.+.+ .+.|+.|++.. ++.+ .....++ . .+.+.++.+
T Consensus 20 ~~~~~~~~~a~~~~~~Ga~~i~~~~--------------~~~i~~i~~~~-~~pv~~~~~~~~~~~~~~i~~~~~~i~~~ 84 (223)
T 1y0e_A 20 HSSFIMSKMALAAYEGGAVGIRANT--------------KEDILAIKETV-DLPVIGIVKRDYDHSDVFITATSKEVDEL 84 (223)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEES--------------HHHHHHHHHHC-CSCEEEECBCCCTTCCCCBSCSHHHHHHH
T ss_pred CCCccHHHHHHHHHHCCCeeeccCC--------------HHHHHHHHHhc-CCCEEeeeccCCCccccccCCcHHHHHHH
Confidence 4668888999999999999886531 24577777654 2333 1111111 0 145778889
Q ss_pred HHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEE
Q 017179 229 AKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMT 308 (376)
Q Consensus 229 ~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~ 308 (376)
.++|+|.+..+.+.. .+| . +...++++.+++.+| |+.+- ++. -|.+|.. .+.+.++|++.
T Consensus 85 ~~~Gad~v~l~~~~~------~~p-~---~~~~~~i~~~~~~~~-~~~v~----~~~-~t~~e~~----~~~~~G~d~i~ 144 (223)
T 1y0e_A 85 IESQCEVIALDATLQ------QRP-K---ETLDELVSYIRTHAP-NVEIM----ADI-ATVEEAK----NAARLGFDYIG 144 (223)
T ss_dssp HHHTCSEEEEECSCS------CCS-S---SCHHHHHHHHHHHCT-TSEEE----EEC-SSHHHHH----HHHHTTCSEEE
T ss_pred HhCCCCEEEEeeecc------cCc-c---cCHHHHHHHHHHhCC-CceEE----ecC-CCHHHHH----HHHHcCCCEEE
Confidence 999999886554321 111 1 223467777777664 45442 232 4666543 46788999987
Q ss_pred eecC-CCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhccc
Q 017179 309 FGQY-MRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASG 349 (376)
Q Consensus 309 ~~qY-~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sg 349 (376)
++.. +....... ...+..++.++++....+...+++|
T Consensus 145 ~~~~g~t~~~~~~----~~~~~~~~~~~~~~~~~~ipvia~G 182 (223)
T 1y0e_A 145 TTLHGYTSYTQGQ----LLYQNDFQFLKDVLQSVDAKVIAEG 182 (223)
T ss_dssp CTTTTSSTTSTTC----CTTHHHHHHHHHHHHHCCSEEEEES
T ss_pred eCCCcCcCCCCCC----CCCcccHHHHHHHHhhCCCCEEEec
Confidence 7532 11111111 0123356667777666555555555
No 71
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=78.29 E-value=41 Score=30.82 Aligned_cols=48 Identities=15% Similarity=0.270 Sum_probs=23.6
Q ss_pred HHHHHHHHcCcccccccccch---------H-HHHHhhcCCCCCHHHHHHHHHHHHHhC
Q 017179 223 GCVREVAKSGLNVFAHNIETV---------E-ELQSAVRDHRANFKQSLDVLMMAKDYV 271 (376)
Q Consensus 223 e~l~~L~~aGld~i~h~lEtv---------~-~l~~~vr~r~~t~e~~L~vl~~ak~~~ 271 (376)
+.++.|.++|+|.+..++-.+ . ...+.+. .+.+.+..++.++.+++..
T Consensus 35 ~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~-~G~~~~~~~~~v~~ir~~~ 92 (262)
T 2ekc_A 35 KAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALK-NGIRFEDVLELSETLRKEF 92 (262)
T ss_dssp HHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHH-cCCCHHHHHHHHHHHHhhc
Confidence 345556666666655543211 1 1111233 3456666666666666643
No 72
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=78.25 E-value=36 Score=33.16 Aligned_cols=132 Identities=17% Similarity=0.256 Sum_probs=76.4
Q ss_pred HHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccccc
Q 017179 162 PTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIE 241 (376)
Q Consensus 162 i~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lE 241 (376)
..+.++.+.+.|++.|+|.+.... ...+.+.|+.+++.+|++.|-+ +.. .+.+..+.+.++|+|.+-.+++
T Consensus 109 ~~~~~~~lieaGvd~I~idta~G~------~~~~~~~I~~ik~~~p~v~Vi~--G~v-~t~e~A~~a~~aGAD~I~vG~g 179 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSHGH------SEGVLQRIRETRAAYPHLEIIG--GNV-ATAEGARALIEAGVSAVKVGIG 179 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTT------SHHHHHHHHHHHHHCTTCEEEE--EEE-CSHHHHHHHHHHTCSEEEECSS
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCC------CHHHHHHHHHHHHhcCCCceEe--eee-CCHHHHHHHHHcCCCEEEEecC
Confidence 456688888999999998653221 2457889999999988765532 111 1577889999999998866433
Q ss_pred c-hHHHHHhhcCCC-CCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHHHcCCcEEEeecCC
Q 017179 242 T-VEELQSAVRDHR-ANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (376)
Q Consensus 242 t-v~~l~~~vr~r~-~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlG-ET~ee~~e~L~~Lrel~vd~v~~~qY~ 313 (376)
. .....+.+.+.+ .......++.+.+++. +++ +|..=| -+.+++.+.|. +|.+.|-++..|
T Consensus 180 pGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~---~iP----VIA~GGI~~~~di~kala----~GAd~V~vGs~f 243 (366)
T 4fo4_A 180 PGSICTTRIVTGVGVPQITAIADAAGVANEY---GIP----VIADGGIRFSGDISKAIA----AGASCVMVGSMF 243 (366)
T ss_dssp CSTTBCHHHHHCCCCCHHHHHHHHHHHHGGG---TCC----EEEESCCCSHHHHHHHHH----TTCSEEEESTTT
T ss_pred CCCCCCcccccCcccchHHHHHHHHHHHhhc---CCe----EEEeCCCCCHHHHHHHHH----cCCCEEEEChHh
Confidence 1 110111111111 1223333333333332 243 333223 36777766554 689999888665
No 73
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=77.61 E-value=38 Score=30.30 Aligned_cols=127 Identities=11% Similarity=0.135 Sum_probs=80.4
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCC------hHHHHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN------NGCVREVAK 230 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~------~e~l~~L~~ 230 (376)
.+.+++.+.++.+.+.|+.-+++... +....+.... .+.+...++...|. ....+...+
T Consensus 17 ~t~~~i~~l~~~a~~~g~~~v~v~~~------------~v~~~~~~l~---~v~v~~v~~~P~g~~~~~~k~~~~~~A~~ 81 (225)
T 1mzh_A 17 LSEKEIEEFVLKSEELGIYAVCVNPY------------HVKLASSIAK---KVKVCCVIGFPLGLNKTSVKVKEAVEAVR 81 (225)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECGG------------GHHHHHHHCS---SSEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCeEEEECHH------------HHHHHHHHhc---CCceeeEecCCCCccchhhhHHHHHHHHH
Confidence 56788889999999999999885421 2222222211 35555444211221 233456667
Q ss_pred cCccccc--ccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHHHcCCcEE
Q 017179 231 SGLNVFA--HNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVRAAGVDVM 307 (376)
Q Consensus 231 aGld~i~--h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lrel~vd~v 307 (376)
.|.|.+. .|+-. ++ ...++..++.++.+++..+ ++.+|. |+-- +-|++++.+..+.+.+.|+|+|
T Consensus 82 ~Gad~Id~viN~g~-------~~--~~~~~~~~~~i~~v~~a~~-pv~vKv--i~e~~~l~~~~~~~~a~~a~eaGad~I 149 (225)
T 1mzh_A 82 DGAQELDIVWNLSA-------FK--SEKYDFVVEELKEIFRETP-SAVHKV--IVETPYLNEEEIKKAVEICIEAGADFI 149 (225)
T ss_dssp TTCSEEEEECCHHH-------HH--TTCHHHHHHHHHHHHHTCT-TSEEEE--ECCGGGCCHHHHHHHHHHHHHHTCSEE
T ss_pred cCCCEEEEEecHHH-------Hh--cCChHHHHHHHHHHHHHhc-CceEEE--EEeCCCCCHHHHHHHHHHHHHhCCCEE
Confidence 8888776 23211 33 3567888888999888664 344444 3322 4588899999999999999999
Q ss_pred Eee
Q 017179 308 TFG 310 (376)
Q Consensus 308 ~~~ 310 (376)
...
T Consensus 150 ~ts 152 (225)
T 1mzh_A 150 KTS 152 (225)
T ss_dssp ECC
T ss_pred EEC
Confidence 553
No 74
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=77.54 E-value=17 Score=32.78 Aligned_cols=153 Identities=16% Similarity=0.221 Sum_probs=85.4
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCc--ccHHHHHHHHHHHHhhCC-CcEEEEecCCCCCChHHHHHHHHcCc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLAD--QGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSGL 233 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d--~g~~~~~elvr~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aGl 233 (376)
.|.....+.++.+.+.|++.+.|=--|..-.+. .| .+++++|++... .+.+++.+-| ..+.++.+.++|+
T Consensus 14 ~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g----~~~v~~lr~~~~~~~~vhlmv~d---p~~~i~~~~~aGa 86 (230)
T 1tqj_A 14 ADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIG----PLIVDAIRPLTKKTLDVHLMIVE---PEKYVEDFAKAGA 86 (230)
T ss_dssp SCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBC----HHHHHHHGGGCCSEEEEEEESSS---GGGTHHHHHHHTC
T ss_pred cCHhHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhh----HHHHHHHHhhcCCcEEEEEEccC---HHHHHHHHHHcCC
Confidence 567788888999999999987765444432222 23 368888887652 2344455533 1345788999999
Q ss_pred cccccccc--chHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeec
Q 017179 234 NVFAHNIE--TVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQ 311 (376)
Q Consensus 234 d~i~h~lE--tv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~q 311 (376)
|.+....| ..+ ...++++.+++ .|+ +.++.+.. .|..|.++.+ .+ ++|+|.++.
T Consensus 87 dgv~vh~e~~~~~--------------~~~~~~~~i~~---~g~--~~gv~~~p-~t~~e~~~~~---~~-~~D~v~~ms 142 (230)
T 1tqj_A 87 DIISVHVEHNASP--------------HLHRTLCQIRE---LGK--KAGAVLNP-STPLDFLEYV---LP-VCDLILIMS 142 (230)
T ss_dssp SEEEEECSTTTCT--------------THHHHHHHHHH---TTC--EEEEEECT-TCCGGGGTTT---GG-GCSEEEEES
T ss_pred CEEEECcccccch--------------hHHHHHHHHHH---cCC--cEEEEEeC-CCcHHHHHHH---Hh-cCCEEEEEE
Confidence 99877666 322 22345566666 353 44444422 3554443322 22 578887753
Q ss_pred CCCCCCCCCCCcccCChHHHHHHHHHHHHHh
Q 017179 312 YMRPSKRHMPVSEYITPEAFERYRALGMEMG 342 (376)
Q Consensus 312 Y~~P~~~~~~v~~~v~pe~~~~l~~~a~~~g 342 (376)
. .|+..+.+.. ....+.++++++...+.|
T Consensus 143 v-~pg~ggq~~~-~~~~~~i~~lr~~~~~~~ 171 (230)
T 1tqj_A 143 V-NPGFGGQSFI-PEVLPKIRALRQMCDERG 171 (230)
T ss_dssp S-CC----CCCC-GGGHHHHHHHHHHHHHHT
T ss_pred e-ccccCCccCc-HHHHHHHHHHHHHHHhcC
Confidence 3 3643332211 123456666666654443
No 75
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=77.18 E-value=7.4 Score=37.49 Aligned_cols=81 Identities=11% Similarity=0.048 Sum_probs=54.2
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCC-cccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcC-c
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLA-DQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG-L 233 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~-d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG-l 233 (376)
..+.++..+.++.+.+.|+++|.++.+...+-. ..+..+..++++.|++.. ++.|- ..+.+. +.+..+.+.++| +
T Consensus 225 g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~-~iPVi-~~GgI~-s~e~a~~~L~~G~a 301 (340)
T 3gr7_A 225 GLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA-DIPTG-AVGLIT-SGWQAEEILQNGRA 301 (340)
T ss_dssp SCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT-TCCEE-EESSCC-CHHHHHHHHHTTSC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc-CCcEE-eeCCCC-CHHHHHHHHHCCCe
Confidence 367899999999999999999999865322110 011223456778888765 24332 233432 677888888888 8
Q ss_pred cccccc
Q 017179 234 NVFAHN 239 (376)
Q Consensus 234 d~i~h~ 239 (376)
|.+..+
T Consensus 302 D~V~iG 307 (340)
T 3gr7_A 302 DLVFLG 307 (340)
T ss_dssp SEEEEC
T ss_pred eEEEec
Confidence 988775
No 76
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=76.63 E-value=10 Score=36.05 Aligned_cols=97 Identities=11% Similarity=0.118 Sum_probs=64.9
Q ss_pred HHhhCCCcEEEEecCCC-CC--C----hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCC
Q 017179 202 LKELKPNMLIEALVPDF-RG--N----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAG 274 (376)
Q Consensus 202 Ik~~~p~i~Ie~l~pd~-~g--~----~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~G 274 (376)
++..+.++..-+++|-- .+ | ...++.+.+.|++.+-.+=-|-+- ..-+.+++.++++.+.+....
T Consensus 21 m~~~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~-------~~Ls~~Er~~v~~~~v~~~~g- 92 (315)
T 3na8_A 21 MSASIHGIIGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEG-------AYLSDPEWDEVVDFTLKTVAH- 92 (315)
T ss_dssp --CCCCEEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTG-------GGSCHHHHHHHHHHHHHHHTT-
T ss_pred cccccCceEEEeeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC-
Confidence 33344556666677722 11 3 445677778888865333222221 135689999999999886432
Q ss_pred ceEEEeEEEec-CCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 275 TLTKTSIMLGC-GETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 275 i~tkt~imvGl-GET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
+.-+|+|. +.+-+|.++..+...++|+|.+-+
T Consensus 93 ---rvpViaGvg~~~t~~ai~la~~A~~~Gadavlv 125 (315)
T 3na8_A 93 ---RVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMV 125 (315)
T ss_dssp ---SSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred ---CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 45689999 488999999999999999997665
No 77
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=76.41 E-value=14 Score=33.62 Aligned_cols=91 Identities=14% Similarity=0.160 Sum_probs=53.5
Q ss_pred hhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
-++.+.++.+.++|+.++++|+.+++.... |.+ .++++.|.+..|++.|-+.-+- ++.+.++.|++ +.+.+-
T Consensus 151 ~~~~~~~~~~~~~g~~eil~t~Id~DGt~~-G~d--~~l~~~l~~~~~~ipviasGGv--~~~~Dl~~l~~-~~~gvi-- 222 (243)
T 4gj1_A 151 KKLMEVLDFYSNKGLKHILCTDISKDGTMQ-GVN--VRLYKLIHEIFPNICIQASGGV--ASLKDLENLKG-ICSGVI-- 222 (243)
T ss_dssp CBHHHHHHHHHTTTCCEEEEEETTC------CCC--HHHHHHHHHHCTTSEEEEESCC--CSHHHHHHTTT-TCSEEE--
T ss_pred chHHHHHHHHhhcCCcEEEeeeeccccccc-CCC--HHHHHHHHHhcCCCCEEEEcCC--CCHHHHHHHHc-cCchhe--
Confidence 345667778889999999999999875432 222 4678888877777666443332 26677777743 332211
Q ss_pred ccchHHHHHhhcCCCCCHHHHHHHH
Q 017179 240 IETVEELQSAVRDHRANFKQSLDVL 264 (376)
Q Consensus 240 lEtv~~l~~~vr~r~~t~e~~L~vl 264 (376)
....+|. ...++++-++.+
T Consensus 223 --vg~Al~~----g~i~l~ea~~~l 241 (243)
T 4gj1_A 223 --VGKALLD----GVFSVEEGIRCL 241 (243)
T ss_dssp --ECHHHHT----TSSCHHHHHHHH
T ss_pred --hHHHHHC----CCCCHHHHHHHh
Confidence 1133432 456777766554
No 78
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=75.39 E-value=12 Score=32.41 Aligned_cols=65 Identities=9% Similarity=0.041 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccc
Q 017179 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFA 237 (376)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~ 237 (376)
++.+.++++.+.|++.|.|+- ++.. ...+.+.++.|++......+.++..+ .++.+.++|+|.+.
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~~---~~~~---~~~~~~~~~~l~~~~~~~~v~v~v~~------~~~~a~~~gad~v~ 91 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMRI---KNAP---TREMYEIGKTLRQLTREYDALFFVDD------RVDVALAVDADGVQ 91 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEECC---CSCC---HHHHHHHHHHHHHHHHHTTCEEEEES------CHHHHHHHTCSEEE
T ss_pred hHHHHHHHHHHCCCCEEEECC---CCCC---HHHHHHHHHHHHHHHHHcCCeEEEcC------hHHHHHHcCCCEEE
Confidence 677888899999999998762 1222 34455666666543211122233322 35777888999774
No 79
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=75.12 E-value=30 Score=33.06 Aligned_cols=77 Identities=9% Similarity=0.127 Sum_probs=51.2
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEee-eCCCCCc----ccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHH
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSV-DRDDLAD----QGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK 230 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg-~r~dl~d----~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~ 230 (376)
..+++.+++.|+++.+.|.+-|-|=|. .|+.... ...+.+..+|+.|++.. ++.|.+=+ + +.+.++.-.+
T Consensus 29 ~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~-~vpiSIDT--~--~~~Va~aAl~ 103 (314)
T 2vef_A 29 FFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES-DVLISIDT--W--KSQVAEAALA 103 (314)
T ss_dssp -CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC-CCEEEEEC--S--CHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC-CceEEEeC--C--CHHHHHHHHH
Confidence 368899999999999999999887552 3554321 12456788888888764 45554422 2 5677887778
Q ss_pred cCccccc
Q 017179 231 SGLNVFA 237 (376)
Q Consensus 231 aGld~i~ 237 (376)
+|.+.+|
T Consensus 104 aGa~iIN 110 (314)
T 2vef_A 104 AGADLVN 110 (314)
T ss_dssp TTCCEEE
T ss_pred cCCCEEE
Confidence 8888775
No 80
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=75.11 E-value=48 Score=32.40 Aligned_cols=126 Identities=13% Similarity=0.152 Sum_probs=82.6
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.|.+..++.++++.+.|..-|.++-.+ ..-++.+..|++..+ +. +..|+.-+...+..-.++|+|-+
T Consensus 43 ~D~~atv~Qi~~l~~aG~diVRvavp~---------~~~a~al~~I~~~~~-vP---lvaDiHf~~~lal~a~e~G~dkl 109 (366)
T 3noy_A 43 HDVEATLNQIKRLYEAGCEIVRVAVPH---------KEDVEALEEIVKKSP-MP---VIADIHFAPSYAFLSMEKGVHGI 109 (366)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEECCS---------HHHHHHHHHHHHHCS-SC---EEEECCSCHHHHHHHHHTTCSEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCCCC---------hHHHHHHHHHHhcCC-CC---EEEeCCCCHHHHHHHHHhCCCeE
Confidence 678888889999999999999997432 123678888888753 22 33443227777777888999987
Q ss_pred cccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEe---------cC-CCHHHHHH----HHHHHHHc
Q 017179 237 AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLG---------CG-ETPDQVVS----TMEKVRAA 302 (376)
Q Consensus 237 ~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvG---------lG-ET~ee~~e----~L~~Lrel 302 (376)
-+|-- .+. +-+++-++++.|++. |+++..++=-| +| .|.|.+++ +++.++++
T Consensus 110 RINPG-------Nig----~~~~~~~vv~~ak~~---~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~ 175 (366)
T 3noy_A 110 RINPG-------NIG----KEEIVREIVEEAKRR---GVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKW 175 (366)
T ss_dssp EECHH-------HHS----CHHHHHHHHHHHHHH---TCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHT
T ss_pred EECCc-------ccC----chhHHHHHHHHHHHc---CCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhC
Confidence 65511 122 135566788999985 56655543333 43 67666554 46677888
Q ss_pred CCcEEEe
Q 017179 303 GVDVMTF 309 (376)
Q Consensus 303 ~vd~v~~ 309 (376)
+++-+-+
T Consensus 176 gf~~ivi 182 (366)
T 3noy_A 176 GFTNYKV 182 (366)
T ss_dssp TCCCEEE
T ss_pred CCCeEEE
Confidence 8865545
No 81
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=74.94 E-value=11 Score=36.67 Aligned_cols=107 Identities=9% Similarity=0.085 Sum_probs=67.1
Q ss_pred CchhHHHHHHHHHHCCCcEEEEEeeeCCC--------CC---------------cccHHHHHHHHHHHHhhCCCcEEEEe
Q 017179 158 DPDEPTNVAEAIASWGLDYVVITSVDRDD--------LA---------------DQGSGHFAQTVRKLKELKPNMLIEAL 214 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~eIvLTsg~r~d--------l~---------------d~g~~~~~elvr~Ik~~~p~i~Ie~l 214 (376)
+.+...+.++++++.|.+-|.++.-..+. +. ..+.+.+..+.+.-++ . ++.+ +
T Consensus 33 s~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~-~-Gi~~--~ 108 (349)
T 2wqp_A 33 SLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVES-K-GMIF--I 108 (349)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHH-T-TCEE--E
T ss_pred CHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHH-h-CCeE--E
Confidence 57888899999999999999987332110 11 1234444444444333 2 3333 3
Q ss_pred cCCCCCChHHHHHHHHcCccccccc-ccchH-HHHHhhc---------CCCCCHHHHHHHHHHHHHh
Q 017179 215 VPDFRGNNGCVREVAKSGLNVFAHN-IETVE-ELQSAVR---------DHRANFKQSLDVLMMAKDY 270 (376)
Q Consensus 215 ~pd~~g~~e~l~~L~~aGld~i~h~-lEtv~-~l~~~vr---------~r~~t~e~~L~vl~~ak~~ 270 (376)
+--| +.+.++.|.+.|+|.+.++ -|..+ .|++.+. ..-.+.++++..++.++..
T Consensus 109 st~~--d~~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGmat~~Ei~~Ave~i~~~ 173 (349)
T 2wqp_A 109 STLF--SRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSIESIKKSVEIIREA 173 (349)
T ss_dssp EEEC--SHHHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHHH
T ss_pred EeeC--CHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHc
Confidence 3334 6788998988889998776 34333 5666542 1246788888888888773
No 82
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=74.75 E-value=14 Score=34.56 Aligned_cols=84 Identities=11% Similarity=-0.035 Sum_probs=52.8
Q ss_pred hHHHHHHHHcCcc---cccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLN---VFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEK 298 (376)
Q Consensus 222 ~e~l~~L~~aGld---~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~ 298 (376)
.+.++.+.++|.| .+..|+-. +.. +.-+.-+.+.+...++++.+++....-+.+|. ..+.+.+++.+..+.
T Consensus 109 ~~~a~~~~~~g~d~~~~iein~~~-P~~-~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~----~~~~~~~~~~~~a~~ 182 (314)
T 2e6f_A 109 VAMVRRLAPVAQEKGVLLELNLSC-PNV-PGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKM----PPYFDIAHFDTAAAV 182 (314)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCC-CCS-TTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEE----CCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcCceEEEEcCC-CCC-CCchhhcCCHHHHHHHHHHHHHhcCCCEEEEE----CCCCCHHHHHHHHHH
Confidence 4566777788888 77776531 111 11000123677788899888885311122332 234588899999999
Q ss_pred HHHcC-CcEEEeec
Q 017179 299 VRAAG-VDVMTFGQ 311 (376)
Q Consensus 299 Lrel~-vd~v~~~q 311 (376)
+.+.+ +|.+.+..
T Consensus 183 ~~~aG~~d~i~v~~ 196 (314)
T 2e6f_A 183 LNEFPLVKFVTCVN 196 (314)
T ss_dssp HHTCTTEEEEEECC
T ss_pred HHhcCCceEEEEeC
Confidence 99999 99987643
No 83
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=74.60 E-value=45 Score=30.97 Aligned_cols=120 Identities=13% Similarity=0.191 Sum_probs=72.7
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccc
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h 238 (376)
...+.+.|++..+.|..-|.+.. .+.+ +..-.+.++.|++.. ++.| +.-||.-++..+...+++|+|.+-.
T Consensus 71 ~~~p~~~A~~y~~~GA~~isvlt--d~~~----f~Gs~~~l~~ir~~v-~lPv--l~kdfiid~~qv~~A~~~GAD~VlL 141 (272)
T 3qja_A 71 IADPAKLAQAYQDGGARIVSVVT--EQRR----FQGSLDDLDAVRASV-SIPV--LRKDFVVQPYQIHEARAHGADMLLL 141 (272)
T ss_dssp --CHHHHHHHHHHTTCSEEEEEC--CGGG----HHHHHHHHHHHHHHC-SSCE--EEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEEec--Chhh----cCCCHHHHHHHHHhC-CCCE--EECccccCHHHHHHHHHcCCCEEEE
Confidence 34678889999999999986542 1111 222234666676653 2322 3456765776789999999998866
Q ss_pred cccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeec
Q 017179 239 NIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQ 311 (376)
Q Consensus 239 ~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~q 311 (376)
..... +.++.-++++.++++ |+.+ |+.. -|.+|+...+ +.|+|++.+++
T Consensus 142 i~a~l------------~~~~l~~l~~~a~~l---Gl~~----lvev-~t~ee~~~A~----~~Gad~IGv~~ 190 (272)
T 3qja_A 142 IVAAL------------EQSVLVSMLDRTESL---GMTA----LVEV-HTEQEADRAL----KAGAKVIGVNA 190 (272)
T ss_dssp EGGGS------------CHHHHHHHHHHHHHT---TCEE----EEEE-SSHHHHHHHH----HHTCSEEEEES
T ss_pred ecccC------------CHHHHHHHHHHHHHC---CCcE----EEEc-CCHHHHHHHH----HCCCCEEEECC
Confidence 42221 234555667777773 5543 2222 3566654433 56999999974
No 84
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=74.59 E-value=52 Score=30.12 Aligned_cols=79 Identities=19% Similarity=0.238 Sum_probs=52.5
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCccc---------------HHHHHHHHHHHHhhCCCcEEEEecCCC---
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQG---------------SGHFAQTVRKLKELKPNMLIEALVPDF--- 218 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g---------------~~~~~elvr~Ik~~~p~i~Ie~l~pd~--- 218 (376)
.+.++-.+.++++.+.|++.|-|-.--.+.+.|+. .+.+.+++++|++..|++.+-++ +.+
T Consensus 28 p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m-~y~n~v 106 (262)
T 2ekc_A 28 PDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLM-TYYNPI 106 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEE-CCHHHH
T ss_pred CChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEE-ecCcHH
Confidence 45678899999999999999888332222232321 13466889999988766666553 222
Q ss_pred -C-CChHHHHHHHHcCcccc
Q 017179 219 -R-GNNGCVREVAKSGLNVF 236 (376)
Q Consensus 219 -~-g~~e~l~~L~~aGld~i 236 (376)
. |....++.++++|+|.+
T Consensus 107 ~~~g~~~f~~~~~~aG~dgv 126 (262)
T 2ekc_A 107 FRIGLEKFCRLSREKGIDGF 126 (262)
T ss_dssp HHHCHHHHHHHHHHTTCCEE
T ss_pred HHhhHHHHHHHHHHcCCCEE
Confidence 1 22566788999999954
No 85
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=74.57 E-value=66 Score=31.29 Aligned_cols=132 Identities=17% Similarity=0.206 Sum_probs=79.2
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccc
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h 238 (376)
.++..+.++.+.+.|++.|+|-.... ...++.+.|+.|++..|++.|-+ ... .+.+..+.+.++|+|.+-.
T Consensus 98 ~~~~~e~~~~a~~aGvdvI~id~a~G------~~~~~~e~I~~ir~~~~~~~Vi~--G~V-~T~e~A~~a~~aGaD~I~V 168 (361)
T 3r2g_A 98 TENELQRAEALRDAGADFFCVDVAHA------HAKYVGKTLKSLRQLLGSRCIMA--GNV-ATYAGADYLASCGADIIKA 168 (361)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECSCC------SSHHHHHHHHHHHHHHTTCEEEE--EEE-CSHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHHHcCCCEEEEeCCCC------CcHhHHHHHHHHHHhcCCCeEEE--cCc-CCHHHHHHHHHcCCCEEEE
Confidence 45667788999999999777643221 13467889999998877655433 111 1567889999999998865
Q ss_pred cccc-hHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEE-ecCCCHHHHHHHHHHHHHcCCcEEEeecCC
Q 017179 239 NIET-VEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIML-GCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (376)
Q Consensus 239 ~lEt-v~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imv-GlGET~ee~~e~L~~Lrel~vd~v~~~qY~ 313 (376)
+... ..-..+.+...+.. .+..|..+.+. .. -+|. |=--+.+|+...|. +|.|.|-+|..+
T Consensus 169 g~g~G~~~~tr~~~g~g~p---~l~aI~~~~~~----~~---PVIAdGGI~~~~di~kALa----~GAd~V~iGr~f 231 (361)
T 3r2g_A 169 GIGGGSVCSTRIKTGFGVP---MLTCIQDCSRA----DR---SIVADGGIKTSGDIVKALA----FGADFVMIGGML 231 (361)
T ss_dssp CCSSSSCHHHHHHHCCCCC---HHHHHHHHTTS----SS---EEEEESCCCSHHHHHHHHH----TTCSEEEESGGG
T ss_pred cCCCCcCccccccCCccHH---HHHHHHHHHHh----CC---CEEEECCCCCHHHHHHHHH----cCCCEEEEChHH
Confidence 4331 10001111111111 35556555552 11 2222 33357888887765 689999998665
No 86
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=74.36 E-value=56 Score=30.45 Aligned_cols=119 Identities=11% Similarity=0.048 Sum_probs=73.8
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccc
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h 238 (376)
..++.+.|++..+.|..-|.+.. .+.+..+..+ .++.|++.. ++. ++.-||.-++..+...+.+|+|.+-.
T Consensus 78 ~~dp~~~A~~y~~~GA~~IsVlt--d~~~f~Gs~~----~L~~ir~~v-~lP--Vl~Kdfi~d~~qi~ea~~~GAD~VlL 148 (272)
T 3tsm_A 78 DFDPPALAKAYEEGGAACLSVLT--DTPSFQGAPE----FLTAARQAC-SLP--ALRKDFLFDPYQVYEARSWGADCILI 148 (272)
T ss_dssp SCCHHHHHHHHHHTTCSEEEEEC--CSTTTCCCHH----HHHHHHHTS-SSC--EEEESCCCSTHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHHHHHHHCCCCEEEEec--cccccCCCHH----HHHHHHHhc-CCC--EEECCccCCHHHHHHHHHcCCCEEEE
Confidence 34678889999999998886542 2223223333 445566543 222 34557765777899999999998765
Q ss_pred cccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 239 NIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 239 ~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
..- -.+.++.-++++.++++ |+.+=..+ -|.+|... ..+++.++|.+.
T Consensus 149 i~a------------~L~~~~l~~l~~~a~~l---Gl~~lvev-----h~~eEl~~----A~~~ga~iIGin 196 (272)
T 3tsm_A 149 IMA------------SVDDDLAKELEDTAFAL---GMDALIEV-----HDEAEMER----ALKLSSRLLGVN 196 (272)
T ss_dssp ETT------------TSCHHHHHHHHHHHHHT---TCEEEEEE-----CSHHHHHH----HTTSCCSEEEEE
T ss_pred ccc------------ccCHHHHHHHHHHHHHc---CCeEEEEe-----CCHHHHHH----HHhcCCCEEEEC
Confidence 321 12345666777788884 55432222 36666543 346899999886
No 87
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=74.29 E-value=11 Score=35.50 Aligned_cols=81 Identities=14% Similarity=0.185 Sum_probs=54.4
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEE-ecCCCCCChHHHHHHHHcCcc
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA-LVPDFRGNNGCVREVAKSGLN 234 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~-l~pd~~g~~e~l~~L~~aGld 234 (376)
..+++++.+.++++.+.|++.|.|--... +. -...+.++|+.|++..|++.+.+ ..-++.--......-.++|++
T Consensus 155 ~~~~~~~~~~~~~~~~~G~d~i~l~DT~G--~~--~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~ 230 (302)
T 2ftp_A 155 DVDPRQVAWVARELQQMGCYEVSLGDTIG--VG--TAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIA 230 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEESSS--CC--CHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCC--Cc--CHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCC
Confidence 36789999999999999999998862211 11 14568899999998887666653 222331123334445578999
Q ss_pred cccccc
Q 017179 235 VFAHNI 240 (376)
Q Consensus 235 ~i~h~l 240 (376)
.++..+
T Consensus 231 ~vd~tv 236 (302)
T 2ftp_A 231 VFDSSV 236 (302)
T ss_dssp EEEEBG
T ss_pred EEEecc
Confidence 887654
No 88
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=73.76 E-value=62 Score=30.64 Aligned_cols=74 Identities=12% Similarity=0.079 Sum_probs=46.2
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHH---hhCCCcEEEEecCCCCCChHHHHHHHH--c
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLK---ELKPNMLIEALVPDFRGNNGCVREVAK--S 231 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik---~~~p~i~Ie~l~pd~~g~~e~l~~L~~--a 231 (376)
.+++++++.|++..+.|.+.|-|=++.. ... ..+.+..++..|. +. .++.|.+=+. +.+.++.-.+ +
T Consensus 34 ~~~~~a~~~A~~~v~~GAdiIDIg~g~~-~v~--~~eem~rvv~~i~~~~~~-~~vpisIDT~----~~~V~eaaL~~~~ 105 (300)
T 3k13_A 34 KKYDEALSIARQQVEDGALVIDVNMDDG-LLD--ARTEMTTFLNLIMSEPEI-ARVPVMIDSS----KWEVIEAGLKCLQ 105 (300)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEEECCCT-TSC--HHHHHHHHHHHHHTCHHH-HTSCEEEECS----CHHHHHHHHHHCS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCC-CCC--HHHHHHHHHHHHHHhhhc-CCCeEEEeCC----CHHHHHHHHHhcC
Confidence 5789999999999999999998866422 221 1334444555444 32 2344443232 5677777666 6
Q ss_pred Ccccccc
Q 017179 232 GLNVFAH 238 (376)
Q Consensus 232 Gld~i~h 238 (376)
|.+.+|-
T Consensus 106 Ga~iINd 112 (300)
T 3k13_A 106 GKSIVNS 112 (300)
T ss_dssp SCCEEEE
T ss_pred CCCEEEe
Confidence 8776643
No 89
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=73.12 E-value=54 Score=31.16 Aligned_cols=138 Identities=17% Similarity=0.154 Sum_probs=70.1
Q ss_pred HHHHHCCCcEEEEEe-eeC-CCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCC-------------CCC----------
Q 017179 167 EAIASWGLDYVVITS-VDR-DDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF-------------RGN---------- 221 (376)
Q Consensus 167 ~al~~~G~~eIvLTs-g~r-~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~-------------~g~---------- 221 (376)
+.+++.|+..|.|-- ++. +... ..+++.++++..++.-=.+.+.+-..|+ ..+
T Consensus 34 ~ilk~~G~N~VRi~~w~~P~~g~~--~~~~~~~~~~~A~~~GlkV~ld~Hysd~WadPg~Q~~p~~W~~~~~~~~~~~~~ 111 (332)
T 1hjs_A 34 NILAANGVNTVRQRVWVNPADGNY--NLDYNIAIAKRAKAAGLGVYIDFHYSDTWADPAHQTMPAGWPSDIDNLSWKLYN 111 (332)
T ss_dssp HHHHHTTCCEEEEEECSSCTTCTT--SHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTCCCSHHHHHHHHHH
T ss_pred HHHHHCCCCEEEEeeeeCCCCCcC--CHHHHHHHHHHHHHCCCEEEEEeccCCCcCCccccCCccccccchHHHHHHHHH
Confidence 345678999888742 111 1111 2566777777776652223333222111 101
Q ss_pred --hHHHHHHHHcCc--ccccccccchHHHHHhhcCCCCCHHHHHHHHH----HHHHhC--CCCceEEEeEEEec--CCCH
Q 017179 222 --NGCVREVAKSGL--NVFAHNIETVEELQSAVRDHRANFKQSLDVLM----MAKDYV--PAGTLTKTSIMLGC--GETP 289 (376)
Q Consensus 222 --~e~l~~L~~aGl--d~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~----~ak~~~--p~Gi~tkt~imvGl--GET~ 289 (376)
.+.++.|++.|. +.+..+-|....+.---. ...+++...+.++ .+|+.. |. +-+|+.+ |...
T Consensus 112 yt~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~g-~~~~~~~~~~l~~~~~~avR~~~~~p~-----~~v~ih~~~~~~~ 185 (332)
T 1hjs_A 112 YTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTG-RTENWANIARLLHSAAWGIKDSSLSPK-----PKIMIHLDNGWDW 185 (332)
T ss_dssp HHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTE-ETTCHHHHHHHHHHHHHHHHTSCCSSC-----CEEEEEESCTTCH
T ss_pred HHHHHHHHHHHcCCCCCEEEEeecccccccCcCC-CccCHHHHHHHHHHHHHHHHHhccCCC-----CeEEEEeCCccch
Confidence 266777887764 444445554332110000 1124454444443 455543 32 3345555 6677
Q ss_pred HHHHHHHHHHHHcC------CcEEEeecC
Q 017179 290 DQVVSTMEKVRAAG------VDVMTFGQY 312 (376)
Q Consensus 290 ee~~e~L~~Lrel~------vd~v~~~qY 312 (376)
+.+.--++.+.+.+ +|+|.+..|
T Consensus 186 ~~~~~~~d~~~~~g~~~~~~~DvIG~syY 214 (332)
T 1hjs_A 186 GTQNWWYTNVLKQGTLELSDFDMMGVSFY 214 (332)
T ss_dssp HHHHHHHHHHHTTSSSCGGGCCEEEEECC
T ss_pred HHHHHHHHHHHhcCCCCCCCcCEEEEecC
Confidence 66666667776655 789999644
No 90
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=73.01 E-value=8 Score=37.05 Aligned_cols=80 Identities=15% Similarity=0.132 Sum_probs=54.0
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCC--CCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcC-
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDD--LADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG- 232 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~d--l~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG- 232 (376)
.++.++..+.++.+.+.|+++|.++++.... .+. +.....+.++.|++.. ++.|- ..+.+. +.+....+.+.|
T Consensus 225 g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~-~~~~~~~~~~~ir~~~-~iPVi-~~Ggi~-s~~~a~~~l~~G~ 300 (338)
T 1z41_A 225 GLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINV-FPGYQVSFAEKIREQA-DMATG-AVGMIT-DGSMAEEILQNGR 300 (338)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCC-CTTTTHHHHHHHHHHH-CCEEE-ECSSCC-SHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCC-CccchHHHHHHHHHHC-CCCEE-EECCCC-CHHHHHHHHHcCC
Confidence 4678899999999999999999999875321 111 1122356677777754 34443 233432 677888888888
Q ss_pred ccccccc
Q 017179 233 LNVFAHN 239 (376)
Q Consensus 233 ld~i~h~ 239 (376)
+|.+..+
T Consensus 301 aD~V~iG 307 (338)
T 1z41_A 301 ADLIFIG 307 (338)
T ss_dssp CSEEEEC
T ss_pred ceEEeec
Confidence 9988775
No 91
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=72.82 E-value=15 Score=36.89 Aligned_cols=75 Identities=8% Similarity=0.030 Sum_probs=49.4
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEee-eCCCCCcc----cHHHHHHHHHHHHhh---CC-CcEEEEecCCCCCChHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSV-DRDDLADQ----GSGHFAQTVRKLKEL---KP-NMLIEALVPDFRGNNGCVRE 227 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg-~r~dl~d~----g~~~~~elvr~Ik~~---~p-~i~Ie~l~pd~~g~~e~l~~ 227 (376)
.+.+++++.|+++.+.|.+.|-|=|. .|+....- ....+..+|++|++. .+ ++.|.+=+ + +.+.++.
T Consensus 209 ~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT--~--~~~Vaea 284 (442)
T 3mcm_A 209 FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDT--R--KLEVMQK 284 (442)
T ss_dssp SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEEC--C--CHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeC--C--CHHHHHH
Confidence 78899999999999999998887542 34432111 134466668888763 22 45554422 3 5788888
Q ss_pred HHH--cCccc
Q 017179 228 VAK--SGLNV 235 (376)
Q Consensus 228 L~~--aGld~ 235 (376)
-.+ +|.+.
T Consensus 285 AL~~~aGa~i 294 (442)
T 3mcm_A 285 ILAKHHDIIW 294 (442)
T ss_dssp HHHHHGGGCC
T ss_pred HHhhCCCCCE
Confidence 888 89887
No 92
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=72.56 E-value=18 Score=34.52 Aligned_cols=151 Identities=12% Similarity=0.122 Sum_probs=85.8
Q ss_pred CcCCCCCCCCCCCCCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCc---ccHHHHHHHHHHHHhhCCCcEEEEecC-CC
Q 017179 143 CRFCNVKTSRAPPPPDPDEPTNVAEAIASWGLDYVVITSVDRDDLAD---QGSGHFAQTVRKLKELKPNMLIEALVP-DF 218 (376)
Q Consensus 143 C~FC~v~~~r~~~~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d---~g~~~~~elvr~Ik~~~p~i~Ie~l~p-d~ 218 (376)
|+-+.||.+. .+.+.-..+++.+.+.|.+||-+.- +...+.+ +..+.+.+-|+++++...+..+.+.+- .+
T Consensus 87 ~tVigFP~G~----~~~e~K~~Ea~~Av~~GAdEIDmVi-nig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~ 161 (297)
T 4eiv_A 87 CAAVNFPEGT----GTPDTVSLEAVGALKDGADEIECLI-DWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGE 161 (297)
T ss_dssp EEEESTTTCC----CCHHHHHHHHHHHHHTTCSEEEEEC-CTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSC
T ss_pred EEEecCCCCC----CCHHHHHHHHHHHHHcCCCEEEeee-eHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEeccc
Confidence 4445666543 3466667788888899999997652 2222233 445667777788877665566665443 22
Q ss_pred CCChHHH----HHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhC------------------CCCce
Q 017179 219 RGNNGCV----REVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYV------------------PAGTL 276 (376)
Q Consensus 219 ~g~~e~l----~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~------------------p~Gi~ 276 (376)
..+++.+ +...++|+|.+--+ -- +. +.+++.++..-..+.+++.. +..+.
T Consensus 162 Lt~~e~i~~A~~ia~~AGADFVKTS----TG---f~-~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vg 233 (297)
T 4eiv_A 162 LQGGDIISRAAVAALEGGADFLQTS----SG---LG-ATHATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIG 233 (297)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECC----CS---SS-SCCCCHHHHHHHHHHHHHHHCC------------------CCE
T ss_pred CCcHHHHHHHHHHHHHhCCCEEEcC----CC---CC-CCCCCHHHHHHHHHHHHHHhccccccccccccccccccCCcee
Confidence 2244422 44557888876321 10 01 13555555544444443220 11245
Q ss_pred EEEeEEEecCCCHHHHHHHHHHHHHcCCcEEE
Q 017179 277 TKTSIMLGCGETPDQVVSTMEKVRAAGVDVMT 308 (376)
Q Consensus 277 tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~ 308 (376)
+|+. +|=--|.++.++.++.++++|.++++
T Consensus 234 vKAs--~GGIrt~e~A~~~i~~~~elG~~wl~ 263 (297)
T 4eiv_A 234 IKIE--VGDVHMAETADFLMQMIFENGPRSIV 263 (297)
T ss_dssp EEEE--CTTCCHHHHHHHHHHHHHHHCGGGCS
T ss_pred EEec--CCCCCCHHHHHHHHHHHHHhCccccC
Confidence 5554 12227889999999988888876553
No 93
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=71.95 E-value=20 Score=33.92 Aligned_cols=100 Identities=10% Similarity=0.032 Sum_probs=67.8
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lr 300 (376)
...++.+.++|++.+-.+=-|-+- ..-+.+++.++++.+.+.. . +.-+|+|. +.+-+|.++..+...
T Consensus 32 ~~lv~~li~~Gv~Gl~v~GtTGE~-------~~Lt~~Er~~v~~~~v~~~-g----rvpViaGvg~~~t~~ai~la~~A~ 99 (313)
T 3dz1_A 32 DRLTDFYAEVGCEGVTVLGILGEA-------PKLDAAEAEAVATRFIKRA-K----SMQVIVGVSAPGFAAMRRLARLSM 99 (313)
T ss_dssp HHHHHHHHHTTCSEEEESTGGGTG-------GGSCHHHHHHHHHHHHHHC-T----TSEEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEeCccCcCh-------hhCCHHHHHHHHHHHHHHc-C----CCcEEEecCCCCHHHHHHHHHHHH
Confidence 445677778888765332222221 1356899999999999975 2 44589999 479999999999999
Q ss_pred HcCCcEEEeecCCCCCCCCCCCcccCChHHHHHHHHHHHHHh
Q 017179 301 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMG 342 (376)
Q Consensus 301 el~vd~v~~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~g 342 (376)
++|+|.+-+. .|.. .+ -..+-+++++.+|...+
T Consensus 100 ~~Gadavlv~---~P~~--~~----s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 100 DAGAAGVMIA---PPPS--LR----TDEQITTYFRQATEAIG 132 (313)
T ss_dssp HHTCSEEEEC---CCTT--CC----SHHHHHHHHHHHHHHHC
T ss_pred HcCCCEEEEC---CCCC--CC----CHHHHHHHHHHHHHhCC
Confidence 9999987663 3321 11 01344677777777665
No 94
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=71.90 E-value=11 Score=37.28 Aligned_cols=106 Identities=15% Similarity=0.128 Sum_probs=64.4
Q ss_pred CchhHHHHHHHHHHCCCcEEEEEeeeCCCC--Cc----------------------ccHHHHHHHHHHHHhhCCCcEEEE
Q 017179 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDL--AD----------------------QGSGHFAQTVRKLKELKPNMLIEA 213 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~eIvLTsg~r~dl--~d----------------------~g~~~~~elvr~Ik~~~p~i~Ie~ 213 (376)
|.+...+.++++++.|++-|.++.-..+.+ ++ .+.+.+..+.+.-++ .-|.+
T Consensus 42 sle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~----~Gi~~ 117 (385)
T 1vli_A 42 KLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCRE----KQVIF 117 (385)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHH----TTCEE
T ss_pred cHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHH----cCCcE
Confidence 678889999999999999999876542221 11 122333333333333 22333
Q ss_pred ecCCCCCChHHHHHHHHcCccccccc-ccchH-HHHHhhc---------CCCCCHHHHHHHHHHHHH
Q 017179 214 LVPDFRGNNGCVREVAKSGLNVFAHN-IETVE-ELQSAVR---------DHRANFKQSLDVLMMAKD 269 (376)
Q Consensus 214 l~pd~~g~~e~l~~L~~aGld~i~h~-lEtv~-~l~~~vr---------~r~~t~e~~L~vl~~ak~ 269 (376)
++--| +.+.++.|.+.+++.|.++ -|..+ .|++.+. ..-.+.++++..++.++.
T Consensus 118 ~stpf--D~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStGmaTl~Ei~~Ave~i~~ 182 (385)
T 1vli_A 118 LSTVC--DEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAGAEISDVHEAWRTIRA 182 (385)
T ss_dssp ECBCC--SHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHT
T ss_pred EEccC--CHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHH
Confidence 55445 7888998988888988775 34333 5555542 123466666666666665
No 95
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=71.79 E-value=64 Score=30.92 Aligned_cols=135 Identities=14% Similarity=0.199 Sum_probs=80.0
Q ss_pred chhHHHHHHHHH-HCCCcEEEEEee-eCCCCCcccHHHHHHHHHHHHhhCCCcEEEEe---cCCCCCChHHHHHHHHcCc
Q 017179 159 PDEPTNVAEAIA-SWGLDYVVITSV-DRDDLADQGSGHFAQTVRKLKELKPNMLIEAL---VPDFRGNNGCVREVAKSGL 233 (376)
Q Consensus 159 ~eEi~~~a~al~-~~G~~eIvLTsg-~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l---~pd~~g~~e~l~~L~~aGl 233 (376)
.+++.+.|+... +.|.+.|-|-+. .+++..+-..+.+.++|+.|.+.. ++.|.+= .|.+ +.+.++...++|.
T Consensus 79 ~~~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~-~vPlsIDg~~~~T~--~~eV~eaAleaga 155 (323)
T 4djd_D 79 INEPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAV-GVPLVVVGCGDVEK--DHEVLEAVAEAAA 155 (323)
T ss_dssp TTCHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHC-CSCEEEECCSCHHH--HHHHHHHHHHHTT
T ss_pred HHhHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhC-CceEEEECCCCCCC--CHHHHHHHHHhcC
Confidence 456889999988 999999998543 355544444667888899988764 4555443 0012 4677777777775
Q ss_pred c---ccc-ccccchHHHHHh----------hcCCCCCHHHHHHHHHHHHHhCCCCce---EEEeEEEe-cCCCHHHHHHH
Q 017179 234 N---VFA-HNIETVEELQSA----------VRDHRANFKQSLDVLMMAKDYVPAGTL---TKTSIMLG-CGETPDQVVST 295 (376)
Q Consensus 234 d---~i~-h~lEtv~~l~~~----------vr~r~~t~e~~L~vl~~ak~~~p~Gi~---tkt~imvG-lGET~ee~~e~ 295 (376)
+ .++ .+.+..+++.+- |++ .+.+-.-+.++.+.+ .|+. +--+-.+| ||-+.++-+++
T Consensus 156 g~~~lINsv~~~~~~~m~~laa~~g~~vVlmh~--~d~~~~~~l~~~a~~---~GI~~e~IIlDPg~g~fgk~~e~~l~~ 230 (323)
T 4djd_D 156 GENLLLGNAEQENYKSLTAACMVHKHNIIARSP--LDINICKQLNILINE---MNLPLDHIVIDPSIGGLGYGIEYSFSI 230 (323)
T ss_dssp TSCCEEEEEBTTBCHHHHHHHHHHTCEEEEECS--SCHHHHHHHHHHHHT---TTCCGGGEEEECCCCCTTTTHHHHHHH
T ss_pred CCCCeEEECCcccHHHHHHHHHHhCCeEEEEcc--chHHHHHHHHHHHHH---cCCCHHHEEEeCCCccccCCHHHHHHH
Confidence 4 222 122322344332 221 133333444455555 3542 33333446 67888888888
Q ss_pred HHHHHH
Q 017179 296 MEKVRA 301 (376)
Q Consensus 296 L~~Lre 301 (376)
|+.|+.
T Consensus 231 l~~ir~ 236 (323)
T 4djd_D 231 MERIRL 236 (323)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888886
No 96
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=71.71 E-value=44 Score=30.85 Aligned_cols=73 Identities=12% Similarity=0.006 Sum_probs=51.4
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHc--Ccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS--GLN 234 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a--Gld 234 (376)
.+++++++.|++..+.|.+.|-|=+|.. ... ..+.+..++..|++.. ++.|.+=+ + +.+.++.-.++ |.+
T Consensus 22 ~~~~~a~~~a~~~v~~GAdiIDIg~g~~-~v~--~~ee~~rvv~~i~~~~-~~pisIDT--~--~~~v~~aAl~a~~Ga~ 93 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGARALDLNVGPA-VQD--KVSAMEWLVEVTQEVS-NLTLCLDS--T--NIKAIEAGLKKCKNRA 93 (262)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEBCC-----C--HHHHHHHHHHHHHTTC-CSEEEEEC--S--CHHHHHHHHHHCSSCE
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECCCCC-CCC--hHHHHHHHHHHHHHhC-CCeEEEeC--C--CHHHHHHHHhhCCCCC
Confidence 6889999999999999999998866421 111 2566788888887643 45554433 2 57778777777 888
Q ss_pred ccc
Q 017179 235 VFA 237 (376)
Q Consensus 235 ~i~ 237 (376)
.+|
T Consensus 94 iIN 96 (262)
T 1f6y_A 94 MIN 96 (262)
T ss_dssp EEE
T ss_pred EEE
Confidence 886
No 97
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=71.53 E-value=9.8 Score=36.57 Aligned_cols=99 Identities=13% Similarity=0.139 Sum_probs=61.4
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEE--eeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEE-ecCCCCC-ChHHHHHHHHcC
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVIT--SVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA-LVPDFRG-NNGCVREVAKSG 232 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLT--sg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~-l~pd~~g-~~e~l~~L~~aG 232 (376)
.+++.+.+.++++.++|++.|.|- .|- .. ...+.++|+.+++..|++.|++ ..-++.- ....+. -.++|
T Consensus 166 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~--~~----P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~la-Av~aG 238 (337)
T 3ble_A 166 NSPDYVKSLVEHLSKEHIERIFLPDTLGV--LS----PEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQ-AIRAG 238 (337)
T ss_dssp HCHHHHHHHHHHHHTSCCSEEEEECTTCC--CC----HHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHH-HHHTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCC--cC----HHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHH-HHHhC
Confidence 468889999999999999999883 221 11 4568899999999888777765 2323311 123333 34679
Q ss_pred cccccccccchHHHHHhhcCCCCCHHHHHHHHHHH
Q 017179 233 LNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMA 267 (376)
Q Consensus 233 ld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~a 267 (376)
++.+...+-..=+ +......++.+..|+..
T Consensus 239 a~~vd~tv~GlG~-----~aGN~~~E~lv~~L~~~ 268 (337)
T 3ble_A 239 VKGLHASINGLGE-----RAGNTPLEALVTTIHDK 268 (337)
T ss_dssp CSEEEEBGGGCSS-----TTCBCBHHHHHHHHHHH
T ss_pred CCEEEEecccccc-----cccchhHHHHHHHHHHh
Confidence 8877553321111 12345667766666543
No 98
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=71.01 E-value=52 Score=29.24 Aligned_cols=79 Identities=16% Similarity=0.172 Sum_probs=50.1
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCCCCCccc---------------HHHHHHHHHHHHhhCCCcEEEEec---CCCC-
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQG---------------SGHFAQTVRKLKELKPNMLIEALV---PDFR- 219 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g---------------~~~~~elvr~Ik~~~p~i~Ie~l~---pd~~- 219 (376)
.++..+.++++.+. ++.+.|.---.+...|+. .....+++++|++.. ++.|.+.. |.|.
T Consensus 18 ~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~-~~pv~~~~~~~~~~~~ 95 (248)
T 1geq_A 18 KQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHS-STPIVLMTYYNPIYRA 95 (248)
T ss_dssp HHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTC-CCCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhC-CCCEEEEeccchhhhc
Confidence 36888999999888 998887622111122321 234578889998764 34555443 1111
Q ss_pred CChHHHHHHHHcCccccccc
Q 017179 220 GNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 220 g~~e~l~~L~~aGld~i~h~ 239 (376)
+..+.++.+.++|+|.+-..
T Consensus 96 ~~~~~~~~~~~~Gad~v~~~ 115 (248)
T 1geq_A 96 GVRNFLAEAKASGVDGILVV 115 (248)
T ss_dssp CHHHHHHHHHHHTCCEEEET
T ss_pred CHHHHHHHHHHCCCCEEEEC
Confidence 11578899999999988664
No 99
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=70.64 E-value=17 Score=33.97 Aligned_cols=77 Identities=12% Similarity=0.149 Sum_probs=51.8
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEE-ecCCCCC-ChHHHHHHHHcCcc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA-LVPDFRG-NNGCVREVAKSGLN 234 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~-l~pd~~g-~~e~l~~L~~aGld 234 (376)
.+++++.+.++++.++|++.|.|- |--.+. -...+.++++.+++..|++.|++ ...++.- ....+. -.++|++
T Consensus 153 ~~~~~~~~~~~~~~~~Ga~~i~l~--DT~G~~--~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~la-A~~aGa~ 227 (298)
T 2cw6_A 153 ISPAKVAEVTKKFYSMGCYEISLG--DTIGVG--TPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLM-ALQMGVS 227 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEE--ETTSCC--CHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHH-HHHTTCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEec--CCCCCc--CHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHH-HHHhCCC
Confidence 578999999999999999998885 211111 14678899999999888766664 3334421 122333 3468988
Q ss_pred cccc
Q 017179 235 VFAH 238 (376)
Q Consensus 235 ~i~h 238 (376)
.+..
T Consensus 228 ~vd~ 231 (298)
T 2cw6_A 228 VVDS 231 (298)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7644
No 100
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=70.62 E-value=54 Score=28.96 Aligned_cols=110 Identities=18% Similarity=0.244 Sum_probs=72.8
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++.++.++++.+.|++-|-++- .. + .-.+.++.+++ +++.+..-+ +. +.+.++...++|+|.+
T Consensus 22 ~~~~~~~~~~~~l~~gGv~~iel~~--k~--~-----~~~~~i~~~~~--~~~~~gag~--vl-~~d~~~~A~~~GAd~v 87 (207)
T 2yw3_A 22 RGGEDLLGLARVLEEEGVGALEITL--RT--E-----KGLEALKALRK--SGLLLGAGT--VR-SPKEAEAALEAGAAFL 87 (207)
T ss_dssp CSCCCHHHHHHHHHHTTCCEEEEEC--SS--T-----HHHHHHHHHTT--SSCEEEEES--CC-SHHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeC--CC--h-----HHHHHHHHHhC--CCCEEEeCe--Ee-eHHHHHHHHHcCCCEE
Confidence 4678899999999999999888772 11 1 12467777777 677666544 22 5688999999999976
Q ss_pred cccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 237 AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 237 ~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
.. +..+ .++++.+++. |+. +|.| -.|.+|+.+.+ +.+.|++.++
T Consensus 88 ~~--------------~~~d----~~v~~~~~~~---g~~----~i~G-~~t~~e~~~A~----~~Gad~v~~f 131 (207)
T 2yw3_A 88 VS--------------PGLL----EEVAALAQAR---GVP----YLPG-VLTPTEVERAL----ALGLSALKFF 131 (207)
T ss_dssp EE--------------SSCC----HHHHHHHHHH---TCC----EEEE-ECSHHHHHHHH----HTTCCEEEET
T ss_pred Ec--------------CCCC----HHHHHHHHHh---CCC----EEec-CCCHHHHHHHH----HCCCCEEEEe
Confidence 22 1211 3555555653 332 4556 35777765544 5699999885
No 101
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=70.05 E-value=15 Score=33.14 Aligned_cols=74 Identities=20% Similarity=0.200 Sum_probs=50.8
Q ss_pred hhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
.++.+.++.+.+.|+++++++..++..... + ...+++++|++.. ++.+-+ .....+.+.++.+.++|+|.+..+
T Consensus 35 ~~~~~~a~~~~~~G~~~i~v~d~~~~~~~~-~--~~~~~i~~i~~~~-~ipvi~--~Ggi~~~~~~~~~l~~Gad~V~ig 108 (247)
T 3tdn_A 35 ILLRDWVVEVEKRGAGEILLTSIDRDGTKS-G--YDTEMIRFVRPLT-TLPIIA--SGGAGKMEHFLEAFLRGADKVSIN 108 (247)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEETTTTTCSS-C--CCHHHHHHHGGGC-CSCEEE--ESCCCSHHHHHHHHHTTCSEECCS
T ss_pred CCHHHHHHHHHHcCCCEEEEEecCcccCCC-c--ccHHHHHHHHHhC-CCCEEE--eCCCCCHHHHHHHHHcCCCeeehh
Confidence 467888999999999999998765432111 1 1357788888765 343322 222226788999999999988776
No 102
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=70.01 E-value=21 Score=33.95 Aligned_cols=94 Identities=16% Similarity=0.224 Sum_probs=63.5
Q ss_pred CCCcEEEEecCCC-CC--C----hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEE
Q 017179 206 KPNMLIEALVPDF-RG--N----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTK 278 (376)
Q Consensus 206 ~p~i~Ie~l~pd~-~g--~----~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tk 278 (376)
+.++..-+++|-- .+ | ...++.+.+.|++.+-.+=-|-+- ..-+.+++.++++.+.+.... +
T Consensus 24 ~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~~Er~~v~~~~v~~~~g----r 92 (314)
T 3qze_A 24 IAGSMVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGES-------ATLDVEEHIQVIRRVVDQVKG----R 92 (314)
T ss_dssp CCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTG-------GGCCHHHHHHHHHHHHHHHTT----S
T ss_pred CCeeEEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC----C
Confidence 4456666677621 11 3 445666778888765332122221 135789999999999886432 4
Q ss_pred EeEEEec-CCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 279 TSIMLGC-GETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 279 t~imvGl-GET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
.-+|+|. +.+-+|.++..+...+.|+|.+-+.
T Consensus 93 vpViaGvg~~st~eai~la~~A~~~Gadavlv~ 125 (314)
T 3qze_A 93 IPVIAGTGANSTREAVALTEAAKSGGADACLLV 125 (314)
T ss_dssp SCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEc
Confidence 5689999 4689999999999999999976553
No 103
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=69.99 E-value=24 Score=39.69 Aligned_cols=136 Identities=14% Similarity=0.079 Sum_probs=81.1
Q ss_pred CCCchhHHHHHHHHHHCCC--cEEEEEeeeCCC-----CCcccHHHHHHHHHHHHhhCCCcEEEEecC--CCCC------
Q 017179 156 PPDPDEPTNVAEAIASWGL--DYVVITSVDRDD-----LADQGSGHFAQTVRKLKELKPNMLIEALVP--DFRG------ 220 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~--~eIvLTsg~r~d-----l~d~g~~~~~elvr~Ik~~~p~i~Ie~l~p--d~~g------ 220 (376)
.++.++.+++++++.+.|+ ..|-+.||-.-+ +.+. =.+.++.+++..|++.+..+.- ...|
T Consensus 569 ~~~~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~~~----p~e~l~~~~~~~~~~~~~~l~R~~n~vg~~~~~~ 644 (1165)
T 2qf7_A 569 RMRTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLTED----PWERLALIREGAPNLLLQMLLRGANGVGYTNYPD 644 (1165)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHHCCC----HHHHHHHHHHHCTTSEEEEEEETTTBTCSSCCCH
T ss_pred cCCHHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhcCCC----HHHHHHHHHHHchhhHHHHHhccccccccccCCc
Confidence 3889999999999999965 446665542211 0000 1245667777778888877642 1111
Q ss_pred --ChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-------C-CCHH
Q 017179 221 --NNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-------G-ETPD 290 (376)
Q Consensus 221 --~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-------G-ET~e 290 (376)
..+.++...++|+|++....-. . +.+.....++.+++ .|..+...+.+.. | -+.+
T Consensus 645 ~~~~~~i~~a~~~g~d~irif~sl--------~----~~~~~~~~i~~~~~---~g~~v~~~i~~~~~~~d~~r~~~~~~ 709 (1165)
T 2qf7_A 645 NVVKYFVRQAAKGGIDLFRVFDCL--------N----WVENMRVSMDAIAE---ENKLCEAAICYTGDILNSARPKYDLK 709 (1165)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECTT--------C----CGGGGHHHHHHHHH---TTCEEEEEEECCSCTTCTTSGGGCHH
T ss_pred hhHHHHHHHHHhcCcCEEEEEeeH--------H----HHHHHHHHHHHHHh---ccceEEEEEEEeccccCCCCCCCCHH
Confidence 1456888999999987653211 1 12333455666666 3444544444321 0 2566
Q ss_pred HHHHHHHHHHHcCCcEEEee
Q 017179 291 QVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 291 e~~e~L~~Lrel~vd~v~~~ 310 (376)
.+++.++.+.+.|++.|.|.
T Consensus 710 ~~~~~~~~~~~~Ga~~i~l~ 729 (1165)
T 2qf7_A 710 YYTNLAVELEKAGAHIIAVK 729 (1165)
T ss_dssp HHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEe
Confidence 67777777777777777663
No 104
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=69.75 E-value=58 Score=32.75 Aligned_cols=131 Identities=14% Similarity=0.181 Sum_probs=80.5
Q ss_pred hhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
.+..+.++.+.+.|++-|.|-+.... .....++|+.|++..|++.|-+ .+. .+.+.++.+.++|+|.+..+
T Consensus 254 ~~~~~~a~~~~~aG~d~v~i~~~~G~------~~~~~~~i~~i~~~~~~~pvi~--~~v-~t~~~a~~l~~aGad~I~vg 324 (514)
T 1jcn_A 254 EDDKYRLDLLTQAGVDVIVLDSSQGN------SVYQIAMVHYIKQKYPHLQVIG--GNV-VTAAQAKNLIDAGVDGLRVG 324 (514)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCC------SHHHHHHHHHHHHHCTTCEEEE--EEE-CSHHHHHHHHHHTCSEEEEC
T ss_pred hhhHHHHHHHHHcCCCEEEeeccCCc------chhHHHHHHHHHHhCCCCceEe--ccc-chHHHHHHHHHcCCCEEEEC
Confidence 34677888888999999998443221 1345789999999887665532 111 15788999999999988432
Q ss_pred -----ccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEE-ecCCCHHHHHHHHHHHHHcCCcEEEeecCC
Q 017179 240 -----IETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIML-GCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (376)
Q Consensus 240 -----lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imv-GlGET~ee~~e~L~~Lrel~vd~v~~~qY~ 313 (376)
+.+.. ...+-+......+..+..+++.. ++++ |. |=--+.+|+.+.+. +|.+.|-++..+
T Consensus 325 ~~~G~~~~t~----~~~~~g~~~~~~~~~~~~~~~~~--~ipV----ia~GGI~~~~di~kala----~GAd~V~iG~~~ 390 (514)
T 1jcn_A 325 MGCGSICITQ----EVMACGRPQGTAVYKVAEYARRF--GVPI----IADGGIQTVGHVVKALA----LGASTVMMGSLL 390 (514)
T ss_dssp SSCSCCBTTB----CCCSCCCCHHHHHHHHHHHHGGG--TCCE----EEESCCCSHHHHHHHHH----TTCSEEEESTTT
T ss_pred CCCCcccccc----cccCCCccchhHHHHHHHHHhhC--CCCE----EEECCCCCHHHHHHHHH----cCCCeeeECHHH
Confidence 22211 11111222445566666666532 2332 22 11247788887765 699999998654
No 105
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=69.64 E-value=36 Score=31.99 Aligned_cols=114 Identities=17% Similarity=0.258 Sum_probs=70.9
Q ss_pred CcEEEEecCCC-CC--C----hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEe
Q 017179 208 NMLIEALVPDF-RG--N----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTS 280 (376)
Q Consensus 208 ~i~Ie~l~pd~-~g--~----~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~ 280 (376)
++..-+++|-- .+ | ...++.+.++|++.+-.+=-|-+ . ..-+.+++.++++.+.+.... +.-
T Consensus 19 Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE-----~--~~Ls~~Er~~v~~~~~~~~~g----rvp 87 (304)
T 3cpr_A 19 TVGVAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGE-----S--PTTTAAEKLELLKAVREEVGD----RAK 87 (304)
T ss_dssp SEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTT-----T--TTSCHHHHHHHHHHHHHHHTT----TSE
T ss_pred ceEEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccC-----h--hhCCHHHHHHHHHHHHHHhCC----CCc
Confidence 45555566621 11 3 44566677788776532211222 1 245789999999999886432 345
Q ss_pred EEEec-CCCHHHHHHHHHHHHHcCCcEEEee-cCC-CCCCCCCCCcccCChHHHHHHHHHHHHHh
Q 017179 281 IMLGC-GETPDQVVSTMEKVRAAGVDVMTFG-QYM-RPSKRHMPVSEYITPEAFERYRALGMEMG 342 (376)
Q Consensus 281 imvGl-GET~ee~~e~L~~Lrel~vd~v~~~-qY~-~P~~~~~~v~~~v~pe~~~~l~~~a~~~g 342 (376)
+|+|. +.+-+|.++..+...+.|+|.+-+. +|+ .|+ ..+-+++++.+|...+
T Consensus 88 viaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~----------~~~l~~~f~~ia~a~~ 142 (304)
T 3cpr_A 88 LIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSKPS----------QEGLLAHFGAIAAATE 142 (304)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCC----------HHHHHHHHHHHHHHCC
T ss_pred EEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCC----------HHHHHHHHHHHHHhcC
Confidence 89999 5588999999999999999966553 332 221 1234666667766544
No 106
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=69.31 E-value=38 Score=29.33 Aligned_cols=122 Identities=20% Similarity=0.285 Sum_probs=71.3
Q ss_pred HHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchH
Q 017179 165 VAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVE 244 (376)
Q Consensus 165 ~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~ 244 (376)
.++.+.+.|++.|++-. .+. .+++.++++.+++..-.+.++++.|.- ..+.++.+.+.|+|.+..+. ...
T Consensus 69 ~~~~~~~~Gad~v~v~~-----~~~--~~~~~~~~~~~~~~g~~~~v~~~~~~t--~~~~~~~~~~~g~d~i~v~~-g~~ 138 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLG-----VTD--VLTIQSCIRAAKEAGKQVVVDMICVDD--LPARVRLLEEAGADMLAVHT-GTD 138 (211)
T ss_dssp HHHHHHHTTCSEEEEET-----TSC--HHHHHHHHHHHHHHTCEEEEECTTCSS--HHHHHHHHHHHTCCEEEEEC-CHH
T ss_pred HHHHHHhcCCCEEEEeC-----CCC--hhHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHHcCCCEEEEcC-CCc
Confidence 47888899999998732 221 345677788887753222333344431 24668888899999764321 011
Q ss_pred HHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecCC
Q 017179 245 ELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (376)
Q Consensus 245 ~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY~ 313 (376)
-.. .. .. .++.++.+++..+. + -++++.|=+.+ .+..+.+.|.|.+-+|..+
T Consensus 139 -g~~-~~--~~----~~~~i~~l~~~~~~-~----~i~~~gGI~~~----~~~~~~~~Gad~vvvGsai 190 (211)
T 3f4w_A 139 -QQA-AG--RK----PIDDLITMLKVRRK-A----RIAVAGGISSQ----TVKDYALLGPDVVIVGSAI 190 (211)
T ss_dssp -HHH-TT--CC----SHHHHHHHHHHCSS-C----EEEEESSCCTT----THHHHHTTCCSEEEECHHH
T ss_pred -ccc-cC--CC----CHHHHHHHHHHcCC-C----cEEEECCCCHH----HHHHHHHcCCCEEEECHHH
Confidence 001 11 11 24666777775432 3 35667766643 4555667899999998553
No 107
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=69.00 E-value=54 Score=30.40 Aligned_cols=100 Identities=11% Similarity=0.194 Sum_probs=65.5
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lr 300 (376)
...++.+.++|++.+-.+=-|-+- ..-+.+++.++++.+.+... | +|+|. +.+-+|.++..+...
T Consensus 22 ~~lv~~li~~Gv~gl~v~GttGE~-------~~Ls~~Er~~v~~~~~~~~~-g------vi~Gvg~~~t~~ai~la~~A~ 87 (286)
T 2r91_A 22 ANHVKNITSKGVDVVFVAGTTGLG-------PALSLQEKMELTDAATSAAR-R------VIVQVASLNADEAIALAKYAE 87 (286)
T ss_dssp HHHHHHHHHTTCCEEEETSTTTTG-------GGSCHHHHHHHHHHHHHHCS-S------EEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhC-C------EEEeeCCCCHHHHHHHHHHHH
Confidence 445666777887765322112221 13568999999999998632 2 99999 558899999999999
Q ss_pred HcCCcEEEeecCCCCCCCCCCCcccCC-hHHHHHHHHHHHHHhh
Q 017179 301 AAGVDVMTFGQYMRPSKRHMPVSEYIT-PEAFERYRALGMEMGF 343 (376)
Q Consensus 301 el~vd~v~~~qY~~P~~~~~~v~~~v~-pe~~~~l~~~a~~~gf 343 (376)
+.|+|.+-+. .|.- .+ ..+ .+-+++++.+|...+.
T Consensus 88 ~~Gadavlv~---~P~y--~~---~~s~~~l~~~f~~va~a~~l 123 (286)
T 2r91_A 88 SRGAEAVASL---PPYY--FP---RLSERQIAKYFRDLCSAVSI 123 (286)
T ss_dssp HTTCSEEEEC---CSCS--ST---TCCHHHHHHHHHHHHHHCSS
T ss_pred hcCCCEEEEc---CCcC--CC---CCCHHHHHHHHHHHHHhcCC
Confidence 9999976663 2311 11 012 3347777888876543
No 108
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=68.39 E-value=27 Score=32.69 Aligned_cols=99 Identities=12% Similarity=0.111 Sum_probs=65.1
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lr 300 (376)
...++.+.+.|++.+-.+=-|-+- ..-+.+++.++++.+.+.. .| +|+|. +.+-+|.++..+...
T Consensus 23 ~~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~eEr~~v~~~~~~~~-~g------viaGvg~~~t~~ai~la~~A~ 88 (293)
T 1w3i_A 23 KIHAENLIRKGIDKLFVNGTTGLG-------PSLSPEEKLENLKAVYDVT-NK------IIFQVGGLNLDDAIRLAKLSK 88 (293)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTG-------GGSCHHHHHHHHHHHHTTC-SC------EEEECCCSCHHHHHHHHHHGG
T ss_pred HHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHc-CC------EEEecCCCCHHHHHHHHHHHH
Confidence 445666777888754322112221 1356899999999999853 22 99999 558899999999999
Q ss_pred HcCCcEEEee-cCCCCCCCCCCCcccCC-hHHHHHHHHHHHHHhh
Q 017179 301 AAGVDVMTFG-QYMRPSKRHMPVSEYIT-PEAFERYRALGMEMGF 343 (376)
Q Consensus 301 el~vd~v~~~-qY~~P~~~~~~v~~~v~-pe~~~~l~~~a~~~gf 343 (376)
+.|+|.+-+. +|+-+ + .+ .+-+++++.+|...+.
T Consensus 89 ~~Gadavlv~~P~y~~-----~----~s~~~l~~~f~~va~a~~l 124 (293)
T 1w3i_A 89 DFDIVGIASYAPYYYP-----R----MSEKHLVKYFKTLCEVSPH 124 (293)
T ss_dssp GSCCSEEEEECCCSCS-----S----CCHHHHHHHHHHHHHHCSS
T ss_pred hcCCCEEEEcCCCCCC-----C----CCHHHHHHHHHHHHhhCCC
Confidence 9999976553 22211 0 12 3347778888876543
No 109
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=67.91 E-value=17 Score=34.41 Aligned_cols=81 Identities=17% Similarity=0.188 Sum_probs=52.5
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeee--CCCC-------Ccc---c---HHHHHHHHHHHHhhCC-CcEEEEecCCCCC
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVD--RDDL-------ADQ---G---SGHFAQTVRKLKELKP-NMLIEALVPDFRG 220 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~--r~dl-------~d~---g---~~~~~elvr~Ik~~~p-~i~Ie~l~pd~~g 220 (376)
++.+++.+.++.+.+.|++.|++++.. +.++ ..+ | .....+.++.|++..+ ++.|-.. +...
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~-GGI~- 299 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGV-GGID- 299 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEE-SSCC-
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEE-CCCC-
Confidence 455688999999999999999998753 2211 111 2 1234577888877643 4555433 3332
Q ss_pred ChHHHHHHHHcCccccccc
Q 017179 221 NNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 221 ~~e~l~~L~~aGld~i~h~ 239 (376)
+.+.+.++.++|+|.+..+
T Consensus 300 ~~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 300 SVIAAREKIAAGASLVQIY 318 (336)
T ss_dssp SHHHHHHHHHHTCSEEEES
T ss_pred CHHHHHHHHHCCCCEEEee
Confidence 5666777777899988664
No 110
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=67.59 E-value=30 Score=32.52 Aligned_cols=92 Identities=13% Similarity=0.186 Sum_probs=61.1
Q ss_pred CCcEEEEecCCC-CC--C----hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEE
Q 017179 207 PNMLIEALVPDF-RG--N----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKT 279 (376)
Q Consensus 207 p~i~Ie~l~pd~-~g--~----~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt 279 (376)
.++..-+++|-- .+ | ...++.+.++|++.+-.+=-|-+- ..-+.+++.++++.+.+.... +.
T Consensus 14 ~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~-------~~Ls~eEr~~v~~~~~~~~~g----rv 82 (301)
T 1xky_A 14 GTIATAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGES-------PTLTSEEKVALYRHVVSVVDK----RV 82 (301)
T ss_dssp CSEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT----SS
T ss_pred CceEEeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC----Cc
Confidence 345555666621 11 3 445666778888765332112221 135689999999999885432 45
Q ss_pred eEEEec-CCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 280 SIMLGC-GETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 280 ~imvGl-GET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
-+|+|. +.+-+|.++..+...+.|+|.+-+
T Consensus 83 pViaGvg~~~t~~ai~la~~A~~~Gadavlv 113 (301)
T 1xky_A 83 PVIAGTGSNNTHASIDLTKKATEVGVDAVML 113 (301)
T ss_dssp CEEEECCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred eEEeCCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 689999 468899999999999999996554
No 111
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=67.59 E-value=18 Score=32.47 Aligned_cols=74 Identities=14% Similarity=0.194 Sum_probs=51.0
Q ss_pred hhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
.++.+.++++.+.|++.+.+...+.. . .+.....+.++.|++.. ++.+-+ .....+.+.++.+.++|+|.+..+
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~-~--~~~~~~~~~i~~i~~~~-~ipvi~--~ggI~~~~~~~~~~~~Gad~V~lg 103 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITAS-V--EKRKTMLELVEKVAEQI-DIPFTV--GGGIHDFETASELILRGADKVSIN 103 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCS-S--SHHHHHHHHHHHHHTTC-CSCEEE--ESSCCSHHHHHHHHHTTCSEEEES
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchh-h--cCCcccHHHHHHHHHhC-CCCEEE--eCCCCCHHHHHHHHHcCCCEEEEC
Confidence 46788889999999999998854322 1 23445678888888754 343332 222236788999999999987665
No 112
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=67.37 E-value=56 Score=28.92 Aligned_cols=97 Identities=8% Similarity=0.025 Sum_probs=51.2
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRA 301 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lre 301 (376)
.+.++.++++|.+.+..... .+ +...+.++.-++.+.+.+ .|+.+.+.- ....++.+++.+.++...+
T Consensus 33 ~~~l~~~~~~G~~~vEl~~~-------~~-~~~~~~~~~~~~~~~l~~---~gl~i~~~~-~~~~~~~~~~~~~i~~A~~ 100 (257)
T 3lmz_A 33 DTTLKTLERLDIHYLCIKDF-------HL-PLNSTDEQIRAFHDKCAA---HKVTGYAVG-PIYMKSEEEIDRAFDYAKR 100 (257)
T ss_dssp HHHHHHHHHTTCCEEEECTT-------TS-CTTCCHHHHHHHHHHHHH---TTCEEEEEE-EEEECSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEecc-------cC-CCCCCHHHHHHHHHHHHH---cCCeEEEEe-ccccCCHHHHHHHHHHHHH
Confidence 56667777777665544322 01 112233333344444444 355443322 2223677777777777777
Q ss_pred cCCcEEEeecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhh
Q 017179 302 AGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRY 345 (376)
Q Consensus 302 l~vd~v~~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~ 345 (376)
+|...|.+. |+ .+.++++.++|.+.|...
T Consensus 101 lGa~~v~~~----p~-----------~~~l~~l~~~a~~~gv~l 129 (257)
T 3lmz_A 101 VGVKLIVGV----PN-----------YELLPYVDKKVKEYDFHY 129 (257)
T ss_dssp HTCSEEEEE----EC-----------GGGHHHHHHHHHHHTCEE
T ss_pred hCCCEEEec----CC-----------HHHHHHHHHHHHHcCCEE
Confidence 777776653 32 245566666666666543
No 113
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=67.08 E-value=47 Score=31.39 Aligned_cols=115 Identities=17% Similarity=0.189 Sum_probs=72.6
Q ss_pred CCcEEEEecCC-C-CC--C----hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEE
Q 017179 207 PNMLIEALVPD-F-RG--N----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTK 278 (376)
Q Consensus 207 p~i~Ie~l~pd-~-~g--~----~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tk 278 (376)
.++..-+++|- - .+ | ...++.+.+.|++.+-.+=-|-+- ..-+.+++.++++.+.+.... +
T Consensus 13 ~Gv~~a~vTPF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~-------~~Ls~eEr~~vi~~~~~~~~g----r 81 (314)
T 3d0c_A 13 STISGINIVPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEF-------YALTIEEAKQVATRVTELVNG----R 81 (314)
T ss_dssp SSEEECCCCCBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTG-------GGSCHHHHHHHHHHHHHHHTT----S
T ss_pred CceEEeeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccCCh-------hhCCHHHHHHHHHHHHHHhCC----C
Confidence 45555556664 2 12 3 445666778888765332112221 135789999999999886432 4
Q ss_pred EeEEEecCCCHHHHHHHHHHHHHcCCcEEEee-cCC-CCCCCCCCCcccCChHHHHHHHHHHHHHh
Q 017179 279 TSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG-QYM-RPSKRHMPVSEYITPEAFERYRALGMEMG 342 (376)
Q Consensus 279 t~imvGlGET~ee~~e~L~~Lrel~vd~v~~~-qY~-~P~~~~~~v~~~v~pe~~~~l~~~a~~~g 342 (376)
.-+|+|.|.+-+|.++..+...+.|+|.+-+. +|+ .|+ ..+-+++++.+|....
T Consensus 82 vpViaGvg~st~~ai~la~~A~~~Gadavlv~~P~y~~~s----------~~~l~~~f~~va~a~~ 137 (314)
T 3d0c_A 82 ATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQPVHPYIT----------DAGAVEYYRNIIEALD 137 (314)
T ss_dssp SEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCCCCSCCC----------HHHHHHHHHHHHHHSS
T ss_pred CeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCC----------HHHHHHHHHHHHHhCC
Confidence 45899995599999999999999999976653 322 221 1234667777777644
No 114
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=67.02 E-value=60 Score=30.64 Aligned_cols=93 Identities=10% Similarity=0.139 Sum_probs=63.1
Q ss_pred CCCcEEEEecCCC-------CCChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEE
Q 017179 206 KPNMLIEALVPDF-------RGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTK 278 (376)
Q Consensus 206 ~p~i~Ie~l~pd~-------~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tk 278 (376)
+.++..-+++|-- .+....++.+.+.|++.+-.+=-|-+- ..-+.+++.++++.+.+.... +
T Consensus 8 ~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~~Er~~v~~~~~~~~~g----r 76 (311)
T 3h5d_A 8 ECKIITAFITPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAES-------PTLTHDEELELFAAVQKVVNG----R 76 (311)
T ss_dssp TCCEEEECCCCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTG-------GGSCHHHHHHHHHHHHHHSCS----S
T ss_pred cCceEEeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC----C
Confidence 3456666667621 112556777888888865332222221 135689999999999986432 4
Q ss_pred EeEEEecC-CCHHHHHHHHHHHHHcCC-cEEEe
Q 017179 279 TSIMLGCG-ETPDQVVSTMEKVRAAGV-DVMTF 309 (376)
Q Consensus 279 t~imvGlG-ET~ee~~e~L~~Lrel~v-d~v~~ 309 (376)
.-+|+|.| .+-+|.++..+...++|. |.+-+
T Consensus 77 vpViaGvg~~~t~~ai~la~~A~~~Ga~davlv 109 (311)
T 3h5d_A 77 VPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLA 109 (311)
T ss_dssp SCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEE
T ss_pred CcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEE
Confidence 56899994 689999999999999985 86555
No 115
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=67.00 E-value=38 Score=34.72 Aligned_cols=111 Identities=18% Similarity=0.263 Sum_probs=61.6
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHH---hhCCCcEEEEecCCCCCChHHHHHHHHcCccc
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLK---ELKPNMLIEALVPDFRGNNGCVREVAKSGLNV 235 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik---~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~ 235 (376)
..++.+.++++.+.|++.|.|=- .+.. ...+.+++++|+ +.+ ++ .+++-|. ++...+.|+|.
T Consensus 24 ~~~l~~~ve~al~~Gv~~vQlR~---K~~~---~~~~~~~a~~l~~l~~~~-~v--~liIND~------~dlA~~~gAdG 88 (540)
T 3nl6_A 24 GKTLYGQVEAGLQNGVTLVQIRE---KDAD---TKFFIEEALQIKELCHAH-NV--PLIINDR------IDVAMAIGADG 88 (540)
T ss_dssp TCCHHHHHHHHHHTTCSEEEECC---SSSC---TTHHHHHHHHHHHHHHHT-TC--CEEECSC------SHHHHHTTCSE
T ss_pred cchHHHHHHHHHHCCCCEEEEec---CCCC---HHHHHHHHHHHHHHHHhc-CC--EEEEeCc------HHHHHHcCCCE
Confidence 34677888888899999887731 2222 233445555444 333 22 2344343 34455678887
Q ss_pred ccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHHHcC---CcEEEeec
Q 017179 236 FAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVRAAG---VDVMTFGQ 311 (376)
Q Consensus 236 i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lrel~---vd~v~~~q 311 (376)
+..+.+-.+ +..+++..+.+ .++|. --|.+|..+ ..+.+ +|+|.+++
T Consensus 89 VHLgq~dl~-------------------~~~ar~~lg~~------~iiG~S~ht~eea~~----A~~~G~~~aDYv~~Gp 139 (540)
T 3nl6_A 89 IHVGQDDMP-------------------IPMIRKLVGPD------MVIGWSVGFPEEVDE----LSKMGPDMVDYIGVGT 139 (540)
T ss_dssp EEECTTSSC-------------------HHHHHHHHCTT------SEEEEEECSHHHHHH----HHHTCC--CCEEEESC
T ss_pred EEEChhhcC-------------------HHHHHHHhCCC------CEEEEECCCHHHHHH----HHHcCCCCCCEEEEcC
Confidence 765543211 11222221122 34555 458777654 34578 99999998
Q ss_pred CC
Q 017179 312 YM 313 (376)
Q Consensus 312 Y~ 313 (376)
.+
T Consensus 140 vf 141 (540)
T 3nl6_A 140 LF 141 (540)
T ss_dssp CS
T ss_pred CC
Confidence 76
No 116
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=66.30 E-value=37 Score=31.33 Aligned_cols=143 Identities=13% Similarity=0.158 Sum_probs=81.4
Q ss_pred CchhHHHHHHHHHH-CCCcEEEEEee--e---CCCCCcccHHHHHHHHHHHHhhCC-CcEEEEecCCCCCChHHHHHHHH
Q 017179 158 DPDEPTNVAEAIAS-WGLDYVVITSV--D---RDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAK 230 (376)
Q Consensus 158 ~~eEi~~~a~al~~-~G~~eIvLTsg--~---r~dl~d~g~~~~~elvr~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~ 230 (376)
++++..+.++.+.+ .|++.|.|.-. . +.+-.....+.+.++++++++... .+.+. +.|+.....+.++.+.+
T Consensus 109 ~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk-~~~~~~~~~~~a~~l~~ 187 (311)
T 1ep3_A 109 EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVK-LSPNVTDIVPIAKAVEA 187 (311)
T ss_dssp SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEE-ECSCSSCSHHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEE-ECCChHHHHHHHHHHHH
Confidence 46788888888877 89997766432 1 101000114567899999988742 13333 33554323667889999
Q ss_pred cCccccccc---------ccchHHHH----HhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCC-CHHHHHHHH
Q 017179 231 SGLNVFAHN---------IETVEELQ----SAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGE-TPDQVVSTM 296 (376)
Q Consensus 231 aGld~i~h~---------lEtv~~l~----~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGE-T~ee~~e~L 296 (376)
+|+|.+... .++..... .-+. ....+...++.++.+++.. ..-+|.+-|= |.+++.+.+
T Consensus 188 ~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~-g~~~~~~~~~~i~~i~~~~------~ipvia~GGI~~~~d~~~~l 260 (311)
T 1ep3_A 188 AGADGLTMINTLMGVRFDLKTRQPILANITGGLS-GPAIKPVALKLIHQVAQDV------DIPIIGMGGVANAQDVLEMY 260 (311)
T ss_dssp TTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEE-SGGGHHHHHHHHHHHHTTC------SSCEEECSSCCSHHHHHHHH
T ss_pred cCCCEEEEeCCCcccccCcccCCccccCCCCccc-CccchHHHHHHHHHHHHhc------CCCEEEECCcCCHHHHHHHH
Confidence 999977541 11110000 0011 1122334567787777732 2334544454 788887776
Q ss_pred HHHHHcCCcEEEeecC
Q 017179 297 EKVRAAGVDVMTFGQY 312 (376)
Q Consensus 297 ~~Lrel~vd~v~~~qY 312 (376)
. .+.|.|-++..
T Consensus 261 ~----~GAd~V~vg~~ 272 (311)
T 1ep3_A 261 M----AGASAVAVGTA 272 (311)
T ss_dssp H----HTCSEEEECTH
T ss_pred H----cCCCEEEECHH
Confidence 4 58999988743
No 117
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=66.19 E-value=11 Score=33.82 Aligned_cols=75 Identities=17% Similarity=0.170 Sum_probs=51.4
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccc
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h 238 (376)
.+++.+.++++.+.|++.+.++..+.+. .+.....+.+++|++.. ++.+ +...+..+.+.++.+.++|+|.+..
T Consensus 30 ~~d~~~~a~~~~~~Gad~i~v~d~~~~~---~~~~~~~~~i~~i~~~~-~iPv--i~~Ggi~~~~~~~~~~~~Gad~V~l 103 (252)
T 1ka9_F 30 AGDPVEAARAYDEAGADELVFLDISATH---EERAILLDVVARVAERV-FIPL--TVGGGVRSLEDARKLLLSGADKVSV 103 (252)
T ss_dssp TTCHHHHHHHHHHHTCSCEEEEECCSST---TCHHHHHHHHHHHHTTC-CSCE--EEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred cCCHHHHHHHHHHcCCCEEEEEcCCccc---cCccccHHHHHHHHHhC-CCCE--EEECCcCCHHHHHHHHHcCCCEEEE
Confidence 3578888999999999999888443221 12445678888998754 3333 2223333678899999999998766
Q ss_pred c
Q 017179 239 N 239 (376)
Q Consensus 239 ~ 239 (376)
+
T Consensus 104 g 104 (252)
T 1ka9_F 104 N 104 (252)
T ss_dssp C
T ss_pred C
Confidence 4
No 118
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=66.08 E-value=27 Score=35.15 Aligned_cols=142 Identities=15% Similarity=0.151 Sum_probs=81.4
Q ss_pred HHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc--------
Q 017179 168 AIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN-------- 239 (376)
Q Consensus 168 al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~-------- 239 (376)
++..+|.+-|.|.... +. ...+.++++..++..=.+.+++- +.+.++...++|++.++.|
T Consensus 125 ea~~~GAD~ILLi~a~---l~---~~~l~~l~~~a~~lgm~~LvEvh------~~eE~~~A~~lga~iIGinnr~L~t~~ 192 (452)
T 1pii_A 125 LARYYQADACLLMLSV---LD---DDQYRQLAAVAHSLEMGVLTEVS------NEEEQERAIALGAKVVGINNRDLRDLS 192 (452)
T ss_dssp HHHHTTCSEEEEETTT---CC---HHHHHHHHHHHHHTTCEEEEEEC------SHHHHHHHHHTTCSEEEEESEETTTTE
T ss_pred HHHHcCCCEEEEEccc---CC---HHHHHHHHHHHHHcCCeEEEEeC------CHHHHHHHHHCCCCEEEEeCCCCCCCC
Confidence 3778999999987653 32 24577777777764222333332 5778888889999999886
Q ss_pred --ccchHHHHHhhcC--------CCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHH----------------
Q 017179 240 --IETVEELQSAVRD--------HRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVV---------------- 293 (376)
Q Consensus 240 --lEtv~~l~~~vr~--------r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~---------------- 293 (376)
+++..++.+.+.+ +=.+.++..++.+. - +|+.+.+.+|= -+...+.+
T Consensus 193 ~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a----~avLVGealmr--~~d~~~~~~~l~~~~~KICGit~~ 265 (452)
T 1pii_A 193 IDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF-A----NGFLIGSALMA--HDDLHAAVRRVLLGENKVCGLTRG 265 (452)
T ss_dssp ECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-C----SEEEECHHHHT--CSCHHHHHHHHHHCSCEECCCCSH
T ss_pred CCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-C----CEEEEcHHHcC--CcCHHHHHHHHHHHhccccCCCcH
Confidence 2344566665531 11456655444433 1 34545555542 12222222
Q ss_pred HHHHHHHHcCCcEEEeecCCCCCCCCCCCcccCChHHHHHHH
Q 017179 294 STMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYR 335 (376)
Q Consensus 294 e~L~~Lrel~vd~v~~~qY~~P~~~~~~v~~~v~pe~~~~l~ 335 (376)
+......++|.|++.|- |+.+++ ++|+++....+.
T Consensus 266 eda~~a~~~Gad~iGfI-f~~~Sp------R~V~~~~a~~i~ 300 (452)
T 1pii_A 266 QDAKAAYDAGAIYGGLI-FVATSP------RCVNVEQAQEVM 300 (452)
T ss_dssp HHHHHHHHHTCSEEEEE-CCTTCT------TBCCHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEee-cCCCCC------CCCCHHHHHHHH
Confidence 22344556789999995 333333 456676655553
No 119
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=65.92 E-value=47 Score=31.02 Aligned_cols=100 Identities=12% Similarity=0.194 Sum_probs=65.2
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lr 300 (376)
...++.+.+.|++.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+...
T Consensus 31 ~~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g----rvpviaGvg~~~t~~ai~la~~a~ 99 (297)
T 3flu_A 31 RDLIDWHIENGTDGIVAVGTTGES-------ATLSVEEHTAVIEAVVKHVAK----RVPVIAGTGANNTVEAIALSQAAE 99 (297)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT----SSCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCccccCc-------ccCCHHHHHHHHHHHHHHhCC----CCcEEEeCCCcCHHHHHHHHHHHH
Confidence 445666778888765332122221 135689999999999886432 45689999 479999999999999
Q ss_pred HcCCcEEEee-cCC-CCCCCCCCCcccCChHHHHHHHHHHHHHh
Q 017179 301 AAGVDVMTFG-QYM-RPSKRHMPVSEYITPEAFERYRALGMEMG 342 (376)
Q Consensus 301 el~vd~v~~~-qY~-~P~~~~~~v~~~v~pe~~~~l~~~a~~~g 342 (376)
+.|+|.+-+. +|+ .|+ ..+-+++++.+|...+
T Consensus 100 ~~Gadavlv~~P~y~~~~----------~~~l~~~f~~va~a~~ 133 (297)
T 3flu_A 100 KAGADYTLSVVPYYNKPS----------QEGIYQHFKTIAEATS 133 (297)
T ss_dssp HTTCSEEEEECCCSSCCC----------HHHHHHHHHHHHHHCC
T ss_pred HcCCCEEEECCCCCCCCC----------HHHHHHHHHHHHHhCC
Confidence 9999976553 332 221 1234566666666544
No 120
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=65.73 E-value=25 Score=32.80 Aligned_cols=78 Identities=14% Similarity=0.162 Sum_probs=54.2
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVR 300 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlG-ET~ee~~e~L~~Lr 300 (376)
...++.+.+.|++.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|.| .+-+|.++..+...
T Consensus 25 ~~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g----r~pviaGvg~~~t~~ai~la~~a~ 93 (291)
T 3tak_A 25 EKLVEWHIEQGTNSIVAVGTTGEA-------STLSMEEHTQVIKEIIRVANK----RIPIIAGTGANSTREAIELTKAAK 93 (291)
T ss_dssp HHHHHHHHHHTCCEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT----SSCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECcccccc-------ccCCHHHHHHHHHHHHHHhCC----CCeEEEeCCCCCHHHHHHHHHHHH
Confidence 445666777887755322112221 134689999999999886432 456899994 69999999999999
Q ss_pred HcCCcEEEee
Q 017179 301 AAGVDVMTFG 310 (376)
Q Consensus 301 el~vd~v~~~ 310 (376)
++|+|.+-+.
T Consensus 94 ~~Gadavlv~ 103 (291)
T 3tak_A 94 DLGADAALLV 103 (291)
T ss_dssp HHTCSEEEEE
T ss_pred hcCCCEEEEc
Confidence 9999976553
No 121
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=65.51 E-value=29 Score=32.98 Aligned_cols=77 Identities=14% Similarity=0.202 Sum_probs=55.2
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lr 300 (376)
...++.+.+.|++.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+...
T Consensus 46 ~~li~~li~~Gv~Gl~v~GtTGE~-------~~Ls~~Er~~v~~~~v~~~~g----rvpViaGvg~~st~~ai~la~~A~ 114 (315)
T 3si9_A 46 CNFVEWQITQGINGVSPVGTTGES-------PTLTHEEHKRIIELCVEQVAK----RVPVVAGAGSNSTSEAVELAKHAE 114 (315)
T ss_dssp HHHHHHHHHTTCSEEECSSTTTTG-------GGSCHHHHHHHHHHHHHHHTT----SSCBEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCccccCc-------cccCHHHHHHHHHHHHHHhCC----CCcEEEeCCCCCHHHHHHHHHHHH
Confidence 445667778888765332122221 135689999999999886432 45689999 579999999999999
Q ss_pred HcCCcEEEe
Q 017179 301 AAGVDVMTF 309 (376)
Q Consensus 301 el~vd~v~~ 309 (376)
+.|+|.+-+
T Consensus 115 ~~Gadavlv 123 (315)
T 3si9_A 115 KAGADAVLV 123 (315)
T ss_dssp HTTCSEEEE
T ss_pred hcCCCEEEE
Confidence 999997655
No 122
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=65.47 E-value=24 Score=32.85 Aligned_cols=118 Identities=8% Similarity=0.011 Sum_probs=64.8
Q ss_pred CcccHHHHHHHHHHHHhhC-CC--cEEEEecCCCCCChHHHHHHHHcCcc-cccccccchHHHHHhhcCCCCCHHHHHHH
Q 017179 188 ADQGSGHFAQTVRKLKELK-PN--MLIEALVPDFRGNNGCVREVAKSGLN-VFAHNIETVEELQSAVRDHRANFKQSLDV 263 (376)
Q Consensus 188 ~d~g~~~~~elvr~Ik~~~-p~--i~Ie~l~pd~~g~~e~l~~L~~aGld-~i~h~lEtv~~l~~~vr~r~~t~e~~L~v 263 (376)
...|.+.+.+.++..++.. |+ +.+.+.-.+...-.+.++.+.++|.| .+..|+-. +.. +.-+.-+.+.+...++
T Consensus 72 ~~~g~~~~~~~~~~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~-P~~-~g~~~~g~~~e~~~~i 149 (311)
T 1jub_A 72 PNLGFDYYLDYVLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSC-PNV-PGEPQLAYDFEATEKL 149 (311)
T ss_dssp CBSCHHHHHHHHHHHHHHTCSSSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCC-CCS-SSCCCGGGCHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccC-CCC-CCcccccCCHHHHHHH
Confidence 3344566666665554322 12 22332211110014566777788888 77776521 110 1000012367777888
Q ss_pred HHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeec
Q 017179 264 LMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQ 311 (376)
Q Consensus 264 l~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~q 311 (376)
++.+++....-+.+|. ..+-+.+++.+..+.+.+.++|.+.+.+
T Consensus 150 v~~vr~~~~~Pv~vKi----~~~~~~~~~~~~a~~~~~~G~d~i~v~~ 193 (311)
T 1jub_A 150 LKEVFTFFTKPLGVKL----PPYFDLVHFDIMAEILNQFPLTYVNSVN 193 (311)
T ss_dssp HHHHTTTCCSCEEEEE----CCCCSHHHHHHHHHHHTTSCCCEEEECC
T ss_pred HHHHHHhcCCCEEEEE----CCCCCHHHHHHHHHHHHHcCCcEEEecC
Confidence 8888875311122332 2344888999999999999999988754
No 123
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=65.43 E-value=57 Score=30.31 Aligned_cols=98 Identities=9% Similarity=0.045 Sum_probs=64.4
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lr 300 (376)
...++.+.+.|++.+-.+=-|-+- ..-+.+++.++++.+.+... | +|+|. +.+-+|.++..+...
T Consensus 23 ~~lv~~li~~Gv~gl~v~GtTGE~-------~~Ls~eEr~~v~~~~~~~~~-g------ViaGvg~~~t~~ai~la~~A~ 88 (288)
T 2nuw_A 23 KTHAKNLLEKGIDAIFVNGTTGLG-------PALSKDEKRQNLNALYDVTH-K------LIFQVGSLNLNDVMELVKFSN 88 (288)
T ss_dssp HHHHHHHHHTTCCEEEETSTTTTG-------GGSCHHHHHHHHHHHTTTCS-C------EEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhC-C------eEEeeCCCCHHHHHHHHHHHH
Confidence 345666777887765322112221 13568999999999988431 2 99999 558899999999999
Q ss_pred HcCCcEEEee-cCCCCCCCCCCCcccCC-hHHHHHHHHHHHHHh
Q 017179 301 AAGVDVMTFG-QYMRPSKRHMPVSEYIT-PEAFERYRALGMEMG 342 (376)
Q Consensus 301 el~vd~v~~~-qY~~P~~~~~~v~~~v~-pe~~~~l~~~a~~~g 342 (376)
+.|+|.+-+. +|+-+ . .+ .+-+++++.+|...+
T Consensus 89 ~~Gadavlv~~P~y~~----~-----~s~~~l~~~f~~va~a~~ 123 (288)
T 2nuw_A 89 EMDILGVSSHSPYYFP----R-----LPEKFLAKYYEEIARISS 123 (288)
T ss_dssp TSCCSEEEECCCCSSC----S-----CCHHHHHHHHHHHHHHCC
T ss_pred hcCCCEEEEcCCcCCC----C-----CCHHHHHHHHHHHHHhcC
Confidence 9999976653 22211 0 12 334677788877654
No 124
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=65.39 E-value=21 Score=33.10 Aligned_cols=68 Identities=19% Similarity=0.257 Sum_probs=50.9
Q ss_pred EeEEEec--CCCHHHHHHHHHHHHHcCCcEEEeecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhcc
Q 017179 279 TSIMLGC--GETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVAS 348 (376)
Q Consensus 279 t~imvGl--GET~ee~~e~L~~Lrel~vd~v~~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~s 348 (376)
.-+|.|. .|+.+...+..+.+++.+.++|-+ |++.|......... .-.+.++.+++++.+.|..++.+
T Consensus 24 ~~vIAgpc~~~~~e~a~~~a~~l~~~Ga~~vk~-~~fkprts~~~~~g-~~~egl~~l~~~~~~~Gl~~~te 93 (262)
T 1zco_A 24 FTIIAGPCSIESREQIMKVAEFLAEVGIKVLRG-GAFKPRTSPYSFQG-YGEKALRWMREAADEYGLVTVTE 93 (262)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHTTCCEEEC-BSSCCCSSTTSCCC-CTHHHHHHHHHHHHHHTCEEEEE
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEE-EecccCCCcccccC-ccHHHHHHHHHHHHHcCCcEEEe
Confidence 4577787 899999999999999999999977 77777221111111 23678999999999999877644
No 125
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=65.33 E-value=29 Score=32.61 Aligned_cols=115 Identities=15% Similarity=0.147 Sum_probs=72.9
Q ss_pred CCcEEEEecCCC-CC--C----hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEE
Q 017179 207 PNMLIEALVPDF-RG--N----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKT 279 (376)
Q Consensus 207 p~i~Ie~l~pd~-~g--~----~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt 279 (376)
.++..-+++|-- .+ | ...++.+.+.|++.+-.+=-|-+- ..-+.+++.++++.+.+.... +.
T Consensus 13 ~Gv~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~eEr~~v~~~~~~~~~g----rv 81 (303)
T 2wkj_A 13 RGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEA-------FVQSLSEREQVLEIVAEEAKG----KI 81 (303)
T ss_dssp CSEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT----TS
T ss_pred CceEEeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccCh-------hhCCHHHHHHHHHHHHHHhCC----CC
Confidence 456666667621 11 3 445666778888765332112221 135689999999999886432 34
Q ss_pred eEEEecC-CCHHHHHHHHHHHHHcCCcEEEee-cCC-CCCCCCCCCcccCChHHHHHHHHHHHHHh
Q 017179 280 SIMLGCG-ETPDQVVSTMEKVRAAGVDVMTFG-QYM-RPSKRHMPVSEYITPEAFERYRALGMEMG 342 (376)
Q Consensus 280 ~imvGlG-ET~ee~~e~L~~Lrel~vd~v~~~-qY~-~P~~~~~~v~~~v~pe~~~~l~~~a~~~g 342 (376)
-+|+|.| .+-+|.++..+...+.|+|.+-+. +|+ .|+ ..+-+++++.+|....
T Consensus 82 pViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s----------~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 82 KLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFS----------FEEHCDHYRAIIDSAD 137 (303)
T ss_dssp EEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCC----------HHHHHHHHHHHHHHHT
T ss_pred cEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCC----------HHHHHHHHHHHHHhCC
Confidence 5899995 588999999999999999976553 332 221 1234667777777655
No 126
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=65.33 E-value=10 Score=36.94 Aligned_cols=57 Identities=18% Similarity=0.281 Sum_probs=43.4
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcc-cH------HHHHHHHHHHHhhCCCcEEE
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQ-GS------GHFAQTVRKLKELKPNMLIE 212 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~-g~------~~~~elvr~Ik~~~p~i~Ie 212 (376)
.++.+.+.+.++.+.++|++-|.|=|+..++..|. |. .-+...|+.||+.+|++.|-
T Consensus 69 r~sid~l~~~~~~~~~lGi~av~LFgv~~p~~KD~~gs~A~~~~g~v~rAir~iK~~~P~l~Vi 132 (356)
T 3obk_A 69 RLSMEDLLKEVGEARSYGIKAFMLFPKVDDELKSVMAEESYNPDGLLPRAIMALKEAFPDVLLL 132 (356)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEEEEECCGGGCBSSCGGGGCTTSHHHHHHHHHHHHSTTCEEE
T ss_pred EECHHHHHHHHHHHHHCCCCEEEEecCCCcccCCcccccccCCCChHHHHHHHHHHHCCCCEEE
Confidence 48899999999999999999999999843322221 11 13667899999999997663
No 127
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=64.66 E-value=51 Score=30.71 Aligned_cols=100 Identities=13% Similarity=0.200 Sum_probs=64.7
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lr 300 (376)
...++.+.++|++.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+...
T Consensus 26 ~~lv~~li~~Gv~gl~v~GttGE~-------~~Lt~~Er~~v~~~~~~~~~g----rvpviaGvg~~~t~~ai~la~~a~ 94 (292)
T 3daq_A 26 KAHVNFLLENNAQAIIVNGTTAES-------PTLTTDEKELILKTVIDLVDK----RVPVIAGTGTNDTEKSIQASIQAK 94 (292)
T ss_dssp HHHHHHHHHTTCCEEEESSGGGTG-------GGSCHHHHHHHHHHHHHHHTT----SSCEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECcccccc-------ccCCHHHHHHHHHHHHHHhCC----CCcEEEeCCcccHHHHHHHHHHHH
Confidence 345666778888765333222221 134688999999998886432 45689999 578999999999999
Q ss_pred HcCCcEEEee-cCC-CCCCCCCCCcccCChHHHHHHHHHHHHHh
Q 017179 301 AAGVDVMTFG-QYM-RPSKRHMPVSEYITPEAFERYRALGMEMG 342 (376)
Q Consensus 301 el~vd~v~~~-qY~-~P~~~~~~v~~~v~pe~~~~l~~~a~~~g 342 (376)
++|+|.+-+. +|+ .|+ ..+-+++++.+|...+
T Consensus 95 ~~Gadavlv~~P~y~~~~----------~~~l~~~f~~ia~a~~ 128 (292)
T 3daq_A 95 ALGADAIMLITPYYNKTN----------QRGLVKHFEAIADAVK 128 (292)
T ss_dssp HHTCSEEEEECCCSSCCC----------HHHHHHHHHHHHHHHC
T ss_pred HcCCCEEEECCCCCCCCC----------HHHHHHHHHHHHHhCC
Confidence 9999976553 332 221 1234556666666544
No 128
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=64.38 E-value=44 Score=31.96 Aligned_cols=51 Identities=18% Similarity=0.271 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhCCCCceE--EEeE--EEecCCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 260 SLDVLMMAKDYVPAGTLT--KTSI--MLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 260 ~L~vl~~ak~~~p~Gi~t--kt~i--mvGlGET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
.+++++.+++..+..+++ +.+. .+.-|.+.+|..+.++.|.+.++|++++.
T Consensus 205 ~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs 259 (349)
T 3hgj_A 205 PLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCS 259 (349)
T ss_dssp HHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 367888888876543322 2221 11116789999999999999999999986
No 129
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=64.27 E-value=43 Score=31.77 Aligned_cols=77 Identities=18% Similarity=0.220 Sum_probs=50.2
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lr 300 (376)
...++.+.+.|+|.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+...
T Consensus 35 ~~lv~~li~~Gv~gl~v~GtTGE~-------~~Ls~~Er~~v~~~~~~~~~g----rvpviaGvg~~~t~~ai~la~~a~ 103 (318)
T 3qfe_A 35 ERYYAYLARSGLTGLVILGTNAEA-------FLLTREERAQLIATARKAVGP----DFPIMAGVGAHSTRQVLEHINDAS 103 (318)
T ss_dssp HHHHHHHHTTTCSEEEESSGGGTG-------GGSCHHHHHHHHHHHHHHHCT----TSCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCccccCh-------hhCCHHHHHHHHHHHHHHhCC----CCcEEEeCCCCCHHHHHHHHHHHH
Confidence 345566667777754322112221 134678888888888875322 44578888 468888888888888
Q ss_pred HcCCcEEEe
Q 017179 301 AAGVDVMTF 309 (376)
Q Consensus 301 el~vd~v~~ 309 (376)
+.|+|.+-+
T Consensus 104 ~~Gadavlv 112 (318)
T 3qfe_A 104 VAGANYVLV 112 (318)
T ss_dssp HHTCSEEEE
T ss_pred HcCCCEEEE
Confidence 888886544
No 130
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=63.37 E-value=8.7 Score=36.38 Aligned_cols=76 Identities=13% Similarity=0.136 Sum_probs=46.9
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHH-cCccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK-SGLNV 235 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~-aGld~ 235 (376)
++.++..+.++.+.+.|++.|+++++.+.+... |...+ ++++.|++ ++.|- ..+++. +.+.+..+.+ .|+|.
T Consensus 137 ~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~-~~~~~-~~i~~i~~---~ipVi-~~GgI~-s~~da~~~l~~~gad~ 209 (318)
T 1vhn_A 137 WEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFT-GRAEW-KALSVLEK---RIPTF-VSGDIF-TPEDAKRALEESGCDG 209 (318)
T ss_dssp SSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTS-SCCCG-GGGGGSCC---SSCEE-EESSCC-SHHHHHHHHHHHCCSE
T ss_pred CChHHHHHHHHHHHHhCCCEEEEcCCCccccCC-CCcCH-HHHHHHHc---CCeEE-EECCcC-CHHHHHHHHHcCCCCE
Confidence 444556688999999999999999876543211 11112 55666655 34442 334443 5555555555 79998
Q ss_pred cccc
Q 017179 236 FAHN 239 (376)
Q Consensus 236 i~h~ 239 (376)
+..+
T Consensus 210 V~iG 213 (318)
T 1vhn_A 210 LLVA 213 (318)
T ss_dssp EEES
T ss_pred EEEC
Confidence 8665
No 131
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=63.31 E-value=1.2 Score=41.54 Aligned_cols=17 Identities=12% Similarity=0.272 Sum_probs=10.2
Q ss_pred CCCCHHHHHHHHHHHHH
Q 017179 253 HRANFKQSLDVLMMAKD 269 (376)
Q Consensus 253 r~~t~e~~L~vl~~ak~ 269 (376)
.+.+.++.++.++.+++
T Consensus 71 ~g~~~~~~~~~~~~~r~ 87 (252)
T 3tha_A 71 QGVDIHSVFELLARIKT 87 (252)
T ss_dssp TTCCHHHHHHHHHHCCC
T ss_pred CCCCHHHHHHHHHHHhc
Confidence 35566666666666554
No 132
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=63.18 E-value=31 Score=32.47 Aligned_cols=92 Identities=12% Similarity=0.154 Sum_probs=62.2
Q ss_pred CcEEEEecCCC-CC--C----hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEe
Q 017179 208 NMLIEALVPDF-RG--N----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTS 280 (376)
Q Consensus 208 ~i~Ie~l~pd~-~g--~----~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~ 280 (376)
++..-+++|-- .+ | .+.++.+.+.|++.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-
T Consensus 18 Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~-------~~Lt~~Er~~v~~~~~~~~~g----rvp 86 (304)
T 3l21_A 18 TLLTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGES-------PTTTDGEKIELLRAVLEAVGD----RAR 86 (304)
T ss_dssp SEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT----TSE
T ss_pred ceEEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccch-------hhCCHHHHHHHHHHHHHHhCC----CCe
Confidence 56666666621 11 3 445667778888765332112221 135689999999999886432 456
Q ss_pred EEEec-CCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 281 IMLGC-GETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 281 imvGl-GET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
+|+|. +.+-+|.++..+...+.|+|.+-+.
T Consensus 87 viaGvg~~~t~~ai~la~~a~~~Gadavlv~ 117 (304)
T 3l21_A 87 VIAGAGTYDTAHSIRLAKACAAEGAHGLLVV 117 (304)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 89999 5899999999999999999966553
No 133
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=62.99 E-value=1e+02 Score=31.67 Aligned_cols=76 Identities=9% Similarity=0.207 Sum_probs=48.2
Q ss_pred CchhHHHHHHHHHHCC-----CcEEEEEee-eCCCCCc----ccHHHHHHHHHHHHhh----CCCcEEEEecCCCCCChH
Q 017179 158 DPDEPTNVAEAIASWG-----LDYVVITSV-DRDDLAD----QGSGHFAQTVRKLKEL----KPNMLIEALVPDFRGNNG 223 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G-----~~eIvLTsg-~r~dl~d----~g~~~~~elvr~Ik~~----~p~i~Ie~l~pd~~g~~e 223 (376)
+.+++++.|+++.+.| .+-|-|=|. .|+.... --.+.+..+|++|++. .+++.|. +-.+ ..+
T Consensus 247 ~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~RvvpvI~~i~~~~~~~~~~vpIS--IDT~--~a~ 322 (545)
T 2bmb_A 247 DIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILS--IDTY--RSN 322 (545)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHHHHHHHHHHHHHCSSSCGGGEEEE--EECC--CHH
T ss_pred CHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEE--EeCC--cHH
Confidence 8899999999999999 877766442 3554221 1244566677777651 1234443 3223 567
Q ss_pred HHHHHHHcCccccc
Q 017179 224 CVREVAKSGLNVFA 237 (376)
Q Consensus 224 ~l~~L~~aGld~i~ 237 (376)
.++.-.++|++.+|
T Consensus 323 VaeaAl~aGadIIN 336 (545)
T 2bmb_A 323 VAKEAIKVGVDIIN 336 (545)
T ss_dssp HHHHHHHTTCCEEE
T ss_pred HHHHHHHcCCCEEE
Confidence 77777777888775
No 134
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=62.91 E-value=20 Score=34.43 Aligned_cols=78 Identities=14% Similarity=-0.005 Sum_probs=51.0
Q ss_pred CchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHH------HHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHc
Q 017179 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSG------HFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS 231 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~------~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a 231 (376)
+.++..+.++.+.+.|++.|++++..+.... .|.. ...++++.|++..|++.|-+ .++.. +.+.+..+.+
T Consensus 142 ~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~-~g~~~~~~~~~~~~~i~~ik~~~~~iPVia-nGgI~-s~eda~~~l~- 217 (350)
T 3b0p_A 142 TYRGLAQSVEAMAEAGVKVFVVHARSALLAL-STKANREIPPLRHDWVHRLKGDFPQLTFVT-NGGIR-SLEEALFHLK- 217 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTTSEEEE-ESSCC-SHHHHHHHHT-
T ss_pred cHHHHHHHHHHHHHcCCCEEEEecCchhccc-CcccccCCCcccHHHHHHHHHhCCCCeEEE-ECCcC-CHHHHHHHHh-
Confidence 3457888899999999999999986532100 0100 12467888888776666643 34433 5677777776
Q ss_pred Cccccccc
Q 017179 232 GLNVFAHN 239 (376)
Q Consensus 232 Gld~i~h~ 239 (376)
|+|.+..+
T Consensus 218 GaD~V~iG 225 (350)
T 3b0p_A 218 RVDGVMLG 225 (350)
T ss_dssp TSSEEEEC
T ss_pred CCCEEEEC
Confidence 89987665
No 135
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=62.77 E-value=1.1e+02 Score=29.17 Aligned_cols=72 Identities=11% Similarity=0.183 Sum_probs=50.2
Q ss_pred hhHHHHHHHHHHCCCcEEEEEee-eCCCCCcccHHHHHHHHHHHHhhCCCcEEEE-ecC--CCCCChHHHHHHHHcCcc
Q 017179 160 DEPTNVAEAIASWGLDYVVITSV-DRDDLADQGSGHFAQTVRKLKELKPNMLIEA-LVP--DFRGNNGCVREVAKSGLN 234 (376)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsg-~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~-l~p--d~~g~~e~l~~L~~aGld 234 (376)
+.+.+.|+...+.|.+.|-|-+. .+++-.+-..+.-.++|+.|.+.. ++.|.+ =++ ++ +.+.++.-.++|.+
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~-~vplsI~DT~~~~~--~~~V~eaal~aga~ 149 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAI-DVPLMIIGCGVEEK--DAEIFPVIGEALSG 149 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHC-SSCEEEECCSCHHH--HHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhC-CceEEEECCCCCCC--CHHHHHHHHHhCCC
Confidence 78899999999999999998774 455443333566677888888764 455544 231 13 56778877777765
No 136
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=62.51 E-value=42 Score=31.46 Aligned_cols=77 Identities=12% Similarity=0.086 Sum_probs=53.1
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lr 300 (376)
...++.+.+.|++.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+...
T Consensus 28 ~~lv~~li~~Gv~gl~v~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g----rvpviaGvg~~~t~~ai~la~~a~ 96 (300)
T 3eb2_A 28 GRLCDDLIQAGVHGLTPLGSTGEF-------AYLGTAQREAVVRATIEAAQR----RVPVVAGVASTSVADAVAQAKLYE 96 (300)
T ss_dssp HHHHHHHHHTTCSCBBTTSGGGTG-------GGCCHHHHHHHHHHHHHHHTT----SSCBEEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccCc-------cccCHHHHHHHHHHHHHHhCC----CCcEEEeCCCCCHHHHHHHHHHHH
Confidence 445667778888765332222221 135688889999988886432 34578888 578999999999999
Q ss_pred HcCCcEEEe
Q 017179 301 AAGVDVMTF 309 (376)
Q Consensus 301 el~vd~v~~ 309 (376)
++|+|.+-+
T Consensus 97 ~~Gadavlv 105 (300)
T 3eb2_A 97 KLGADGILA 105 (300)
T ss_dssp HHTCSEEEE
T ss_pred HcCCCEEEE
Confidence 999986544
No 137
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=62.48 E-value=1.2e+02 Score=30.16 Aligned_cols=132 Identities=14% Similarity=0.172 Sum_probs=77.2
Q ss_pred hhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
++..+.++.+.+.|++.|.+.+... . .....+.|+.|++..|++.|-+ +.. .+.+..+.+.++|+|.+..+
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G--~----~~~~~e~i~~i~~~~p~~pvi~--g~~-~t~e~a~~l~~~G~d~I~v~ 306 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHG--H----SRRVIETLEMIKADYPDLPVVA--GNV-ATPEGTEALIKAGADAVKVG 306 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCC--S----SHHHHHHHHHHHHHCTTSCEEE--EEE-CSHHHHHHHHHTTCSEEEEC
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCC--c----hHHHHHHHHHHHHHCCCceEEe--CCc-CCHHHHHHHHHcCCCEEEEc
Confidence 5567788899999999998855422 1 2456789999999887654422 211 15677899999999988654
Q ss_pred ccc--h--HHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecC
Q 017179 240 IET--V--EELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (376)
Q Consensus 240 lEt--v--~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY 312 (376)
.+. . .+.+.-+ +...-..+..+..+.+. .++++-+ .|=--+.+|+.+.+. +|.|.|.+|.-
T Consensus 307 ~~~G~~~~~~~~~~~---g~p~~~~l~~v~~~~~~--~~ipvia---~GGI~~~~di~kala----~GAd~V~iGr~ 371 (494)
T 1vrd_A 307 VGPGSICTTRVVAGV---GVPQLTAVMECSEVARK--YDVPIIA---DGGIRYSGDIVKALA----AGAESVMVGSI 371 (494)
T ss_dssp SSCSTTCHHHHHHCC---CCCHHHHHHHHHHHHHT--TTCCEEE---ESCCCSHHHHHHHHH----TTCSEEEESHH
T ss_pred CCCCccccccccCCC---CccHHHHHHHHHHHHhh--cCCCEEE---ECCcCCHHHHHHHHH----cCCCEEEECHH
Confidence 331 1 1112222 12222333333333331 1243321 122258888887774 68888887644
No 138
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=62.25 E-value=65 Score=29.10 Aligned_cols=71 Identities=14% Similarity=0.242 Sum_probs=42.6
Q ss_pred HHHHHHHHHCCCcEEEEEeeeCCCC-----------CcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHc
Q 017179 163 TNVAEAIASWGLDYVVITSVDRDDL-----------ADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS 231 (376)
Q Consensus 163 ~~~a~al~~~G~~eIvLTsg~r~dl-----------~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a 231 (376)
...++.++..|+.+|.|.-.+.-+. .|-|......+.+.+.+.+|.+.|+....++ +.+.+..+.+
T Consensus 44 ~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~--~~~~~~~~~~- 120 (249)
T 1jw9_B 44 CAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL--DDAELAALIA- 120 (249)
T ss_dssp HHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC--CHHHHHHHHH-
T ss_pred HHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC--CHhHHHHHHh-
Confidence 3567888899999988764432111 1223234445567777888999888776655 4444544433
Q ss_pred Ccccc
Q 017179 232 GLNVF 236 (376)
Q Consensus 232 Gld~i 236 (376)
+.|++
T Consensus 121 ~~DvV 125 (249)
T 1jw9_B 121 EHDLV 125 (249)
T ss_dssp TSSEE
T ss_pred CCCEE
Confidence 34544
No 139
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=62.21 E-value=52 Score=30.13 Aligned_cols=48 Identities=8% Similarity=0.159 Sum_probs=25.0
Q ss_pred hHHHHHHHHcCcccccccccc---------hH-HHHHhhcCCCCCHHHHHHHHHHHHHh
Q 017179 222 NGCVREVAKSGLNVFAHNIET---------VE-ELQSAVRDHRANFKQSLDVLMMAKDY 270 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEt---------v~-~l~~~vr~r~~t~e~~L~vl~~ak~~ 270 (376)
.+.++.|.++|+|.+..++-. +. ...+.+. .+.+.+..+++++.+++.
T Consensus 34 ~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~-~G~~~~~~~~~v~~ir~~ 91 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFA-AGVTPAQCFEMLAIIREK 91 (268)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHH-cCCCHHHHHHHHHHHHhc
Confidence 334556666666666555311 11 1122233 355666667777777664
No 140
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=62.15 E-value=23 Score=32.98 Aligned_cols=128 Identities=16% Similarity=0.118 Sum_probs=72.7
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEE-ecCCCCCChHHHHHHHHcCccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA-LVPDFRGNNGCVREVAKSGLNV 235 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~-l~pd~~g~~e~l~~L~~aGld~ 235 (376)
.+++++.+.++.+.+.|++.|.|--... + .-...+.++|+.|++..|.+.+.+ ...++.--......-.++|++.
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i~l~Dt~G--~--~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~ 227 (295)
T 1ydn_A 152 VTPQAVASVTEQLFSLGCHEVSLGDTIG--R--GTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRV 227 (295)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEETTS--C--CCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEecCCCC--C--cCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCE
Confidence 5789999999999999999998862111 1 114568899999998877554443 2223211122334445789888
Q ss_pred ccccccch-HHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHc
Q 017179 236 FAHNIETV-EELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAA 302 (376)
Q Consensus 236 i~h~lEtv-~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel 302 (376)
++..+-.. +--|..-+......++.+..|+ + .|+. + |-..+.+.++-+++.++
T Consensus 228 vd~sv~GlG~cp~a~g~~GN~~~e~lv~~l~---~---~g~~--~------~id~~~l~~~~~~~~~~ 281 (295)
T 1ydn_A 228 FDASVGGLGGCPFAPGAKGNVDTVAVVEMLH---E---MGFE--T------GLDLDRLRSAGLFTQAL 281 (295)
T ss_dssp EEEBTTCCSCBTTBTTSCCBCBHHHHHHHHH---H---TTCB--C------CCCHHHHHHHHHHHHHH
T ss_pred EEeccccCCCCCCCCCCcCChhHHHHHHHHH---h---cCCC--C------CcCHHHHHHHHHHHHHH
Confidence 77653221 0001111213445666666554 2 2433 2 23566666666666553
No 141
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=62.13 E-value=61 Score=30.16 Aligned_cols=77 Identities=16% Similarity=0.227 Sum_probs=52.7
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lr 300 (376)
...++.+.++|++.+-.+=-|-+- ..-+.+++.++++.+.+... | +.-+|+|. +.+-+|.++..+...
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~-g---rvpviaGvg~~~t~~ai~la~~A~ 92 (294)
T 2ehh_A 24 GNLIEFHVDNGTDAILVCGTTGES-------PTLTFEEHEKVIEFAVKRAA-G---RIKVIAGTGGNATHEAVHLTAHAK 92 (294)
T ss_dssp HHHHHHHHTTTCCEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHT-T---SSEEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhC-C---CCcEEEecCCCCHHHHHHHHHHHH
Confidence 345566677787765322112221 13567899999999888543 2 34589999 458899999999999
Q ss_pred HcCCcEEEe
Q 017179 301 AAGVDVMTF 309 (376)
Q Consensus 301 el~vd~v~~ 309 (376)
+.|+|.+-+
T Consensus 93 ~~Gadavlv 101 (294)
T 2ehh_A 93 EVGADGALV 101 (294)
T ss_dssp HTTCSEEEE
T ss_pred hcCCCEEEE
Confidence 999996554
No 142
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=61.91 E-value=60 Score=30.16 Aligned_cols=77 Identities=13% Similarity=0.180 Sum_probs=53.6
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lr 300 (376)
...++.+.++|++.+-.+=-|-+- ..-+.+++.++++.+.+... | +.-+|+|. +.+-+|.++..+...
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~-g---r~pviaGvg~~~t~~ai~la~~a~ 92 (289)
T 2yxg_A 24 EENINFLIENGVSGIVAVGTTGES-------PTLSHEEHKKVIEKVVDVVN-G---RVQVIAGAGSNCTEEAIELSVFAE 92 (289)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHT-T---SSEEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhC-C---CCcEEEeCCCCCHHHHHHHHHHHH
Confidence 445666777888765322112221 13568899999999888543 2 34589999 458899999999999
Q ss_pred HcCCcEEEe
Q 017179 301 AAGVDVMTF 309 (376)
Q Consensus 301 el~vd~v~~ 309 (376)
+.|+|.+-+
T Consensus 93 ~~Gadavlv 101 (289)
T 2yxg_A 93 DVGADAVLS 101 (289)
T ss_dssp HHTCSEEEE
T ss_pred hcCCCEEEE
Confidence 999996655
No 143
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=61.77 E-value=10 Score=36.67 Aligned_cols=57 Identities=19% Similarity=0.178 Sum_probs=43.2
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCc-cc------HHHHHHHHHHHHhhCCCcEEE
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLAD-QG------SGHFAQTVRKLKELKPNMLIE 212 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d-~g------~~~~~elvr~Ik~~~p~i~Ie 212 (376)
.++.+.+++.++.+.++|++-|.|=|+....+.| .| -.-+...|+.||+.+|++.|-
T Consensus 62 r~sid~l~~~~~~~~~lGi~~v~LFgv~~~~~KD~~gs~A~~~~g~v~rair~iK~~~pdl~vi 125 (337)
T 1w5q_A 62 RLSIDQLLIEAEEWVALGIPALALFPVTPVEKKSLDAAEAYNPEGIAQRATRALRERFPELGII 125 (337)
T ss_dssp EEEHHHHHHHHHHHHHTTCCEEEEEECCCGGGCBSSCGGGGCTTSHHHHHHHHHHHHCTTSEEE
T ss_pred eeCHHHHHHHHHHHHHCCCCEEEEecCCCcccCCcccCccCCCCChHHHHHHHHHHHCCCeEEE
Confidence 3789999999999999999999999983221111 01 124778999999999997663
No 144
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=61.73 E-value=10 Score=34.36 Aligned_cols=81 Identities=17% Similarity=0.257 Sum_probs=55.2
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCc--ccHHHHHHHHHHHHhhC-CCc--EEEEecCCCCCChHHHHHHHH
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLAD--QGSGHFAQTVRKLKELK-PNM--LIEALVPDFRGNNGCVREVAK 230 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d--~g~~~~~elvr~Ik~~~-p~i--~Ie~l~pd~~g~~e~l~~L~~ 230 (376)
..|...+.+.++.+.+.|.+.+++==.|..-.|. .| .+++++|++.+ |.+ .+++.+-+ ..+.++.+.+
T Consensus 13 ~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G----~~~v~~ir~~~~~~~~~dvhLmv~~---p~~~i~~~~~ 85 (228)
T 3ovp_A 13 NSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFG----HPVVESLRKQLGQDPFFDMHMMVSK---PEQWVKPMAV 85 (228)
T ss_dssp TSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBC----HHHHHHHHHHHCSSSCEEEEEECSC---GGGGHHHHHH
T ss_pred eCCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccccC----HHHHHHHHHhhCCCCcEEEEEEeCC---HHHHHHHHHH
Confidence 3678888899999999999988886665432221 23 35778887764 443 34444322 2346888999
Q ss_pred cCcccccccccch
Q 017179 231 SGLNVFAHNIETV 243 (376)
Q Consensus 231 aGld~i~h~lEtv 243 (376)
+|+|.+....|+.
T Consensus 86 aGad~itvH~Ea~ 98 (228)
T 3ovp_A 86 AGANQYTFHLEAT 98 (228)
T ss_dssp HTCSEEEEEGGGC
T ss_pred cCCCEEEEccCCc
Confidence 9999998877753
No 145
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=61.47 E-value=92 Score=27.96 Aligned_cols=115 Identities=18% Similarity=0.166 Sum_probs=67.2
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcE-EEEecCC------CCC-ChHHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNML-IEALVPD------FRG-NNGCVREV 228 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~-Ie~l~pd------~~g-~~e~l~~L 228 (376)
.+++.+.+.|++..+.|..-|.+.+ .+.|++|++.. ++. +...--+ +.. +.+.+..+
T Consensus 33 ~~~~~~~~~A~a~~~~Ga~~i~~~~--------------~~~i~~ir~~v-~~Pvig~~k~~~~~~~~~I~~~~~~i~~~ 97 (229)
T 3q58_A 33 DKPEIVAAMAQAAASAGAVAVRIEG--------------IENLRTVRPHL-SVPIIGIIKRDLTGSPVRITPYLQDVDAL 97 (229)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEES--------------HHHHHHHGGGC-CSCEEEECBCCCSSCCCCBSCSHHHHHHH
T ss_pred CCcchHHHHHHHHHHCCCcEEEECC--------------HHHHHHHHHhc-CCCEEEEEeecCCCCceEeCccHHHHHHH
Confidence 5678889999999999998887531 23577888765 232 2111111 111 34678889
Q ss_pred HHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEE
Q 017179 229 AKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMT 308 (376)
Q Consensus 229 ~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~ 308 (376)
.++|+|.+... +.. ..+ . +..-++++.+++. |+.+-.++ -|.++. +.+.+.|+|+|.
T Consensus 98 ~~aGad~I~l~--~~~----~~~--p---~~l~~~i~~~~~~---g~~v~~~v-----~t~eea----~~a~~~Gad~Ig 154 (229)
T 3q58_A 98 AQAGADIIAFD--ASF----RSR--P---VDIDSLLTRIRLH---GLLAMADC-----STVNEG----ISCHQKGIEFIG 154 (229)
T ss_dssp HHHTCSEEEEE--CCS----SCC--S---SCHHHHHHHHHHT---TCEEEEEC-----SSHHHH----HHHHHTTCSEEE
T ss_pred HHcCCCEEEEC--ccc----cCC--h---HHHHHHHHHHHHC---CCEEEEec-----CCHHHH----HHHHhCCCCEEE
Confidence 99999987442 111 011 1 2333455555652 45443333 355544 455678999996
Q ss_pred e
Q 017179 309 F 309 (376)
Q Consensus 309 ~ 309 (376)
+
T Consensus 155 ~ 155 (229)
T 3q58_A 155 T 155 (229)
T ss_dssp C
T ss_pred e
Confidence 4
No 146
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=61.24 E-value=13 Score=35.95 Aligned_cols=79 Identities=11% Similarity=0.181 Sum_probs=51.6
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeC-CC--CCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcC-
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDR-DD--LADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG- 232 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r-~d--l~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG- 232 (376)
.+.+|..+.++.+.+.|+++|.++++.. ++ .+. +..+..+.++.|++... +.|- ..+.+. +.+..+.+.+.|
T Consensus 243 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~-~~~~~~~~~~~ir~~~~-iPVi-~~GgI~-s~e~a~~~l~~G~ 318 (363)
T 3l5l_A 243 QTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPW-GPAFMGPIAERVRREAK-LPVT-SAWGFG-TPQLAEAALQANQ 318 (363)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCC-CTTTTHHHHHHHHHHHT-CCEE-ECSSTT-SHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCccccccccCC-CcchhHHHHHHHHHHcC-CcEE-EeCCCC-CHHHHHHHHHCCC
Confidence 4567888999999999999999998642 11 111 11234556677776542 3332 233332 578888888888
Q ss_pred ccccccc
Q 017179 233 LNVFAHN 239 (376)
Q Consensus 233 ld~i~h~ 239 (376)
+|.+..+
T Consensus 319 aD~V~iG 325 (363)
T 3l5l_A 319 LDLVSVG 325 (363)
T ss_dssp CSEEECC
T ss_pred ccEEEec
Confidence 8988775
No 147
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=61.14 E-value=1.2e+02 Score=29.32 Aligned_cols=120 Identities=20% Similarity=0.265 Sum_probs=74.0
Q ss_pred HHHHHHHHCCC-cEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccc
Q 017179 164 NVAEAIASWGL-DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIET 242 (376)
Q Consensus 164 ~~a~al~~~G~-~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEt 242 (376)
+.|.++++.|. .-+. . .+. .+.+.+.|+.+|+..+ +.+.+.++......+.++.+.++|+|.+..+ +
T Consensus 61 ~lA~avA~aGGlg~i~---~---~~s---~e~~~~~i~~vk~~~~-l~vga~vg~~~~~~~~~~~lieaGvd~I~id--t 128 (366)
T 4fo4_A 61 RLAIALAQEGGIGFIH---K---NMS---IEQQAAQVHQVKISGG-LRVGAAVGAAPGNEERVKALVEAGVDVLLID--S 128 (366)
T ss_dssp HHHHHHHHTTCEEEEC---S---SSC---HHHHHHHHHHHHTTTS-CCCEEECCSCTTCHHHHHHHHHTTCSEEEEE--C
T ss_pred HHHHHHHHcCCceEee---c---CCC---HHHHHHHHHHHHhcCc-eeEEEEeccChhHHHHHHHHHhCCCCEEEEe--C
Confidence 56666666654 3331 1 222 5667888888887543 4444433211114788999999999987432 1
Q ss_pred hHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecCCCCC
Q 017179 243 VEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYMRPS 316 (376)
Q Consensus 243 v~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY~~P~ 316 (376)
. ....+.+++.++.+++.+|+ +. +++|..-|.++.. .+.+.|+|.|.++ +-|+
T Consensus 129 a----------~G~~~~~~~~I~~ik~~~p~-v~----Vi~G~v~t~e~A~----~a~~aGAD~I~vG--~gpG 181 (366)
T 4fo4_A 129 S----------HGHSEGVLQRIRETRAAYPH-LE----IIGGNVATAEGAR----ALIEAGVSAVKVG--IGPG 181 (366)
T ss_dssp S----------CTTSHHHHHHHHHHHHHCTT-CE----EEEEEECSHHHHH----HHHHHTCSEEEEC--SSCS
T ss_pred C----------CCCCHHHHHHHHHHHHhcCC-Cc----eEeeeeCCHHHHH----HHHHcCCCEEEEe--cCCC
Confidence 1 11235778899999987654 44 3445556777654 4557899999985 3453
No 148
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=60.98 E-value=62 Score=30.17 Aligned_cols=99 Identities=13% Similarity=0.086 Sum_probs=64.5
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lr 300 (376)
.+.++.+.+.|++.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+...
T Consensus 27 ~~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g----r~pviaGvg~~~t~~ai~la~~A~ 95 (294)
T 3b4u_A 27 IAHARRCLSNGCDSVTLFGTTGEG-------CSVGSRERQAILSSFIAAGIA----PSRIVTGVLVDSIEDAADQSAEAL 95 (294)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTG-------GGSCHHHHHHHHHHHHHTTCC----GGGEEEEECCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC----CCcEEEeCCCccHHHHHHHHHHHH
Confidence 445666777887765322112220 135689999999999985432 34589999 458899999999999
Q ss_pred HcCCcEEEee-cCC-C-CCCCCCCCcccCChHHHHHHHHHHHHH
Q 017179 301 AAGVDVMTFG-QYM-R-PSKRHMPVSEYITPEAFERYRALGMEM 341 (376)
Q Consensus 301 el~vd~v~~~-qY~-~-P~~~~~~v~~~v~pe~~~~l~~~a~~~ 341 (376)
+.|.|.+-+. +|+ . |+ ..+-+++++.+|...
T Consensus 96 ~~Gadavlv~~P~y~~~~s----------~~~l~~~f~~va~a~ 129 (294)
T 3b4u_A 96 NAGARNILLAPPSYFKNVS----------DDGLFAWFSAVFSKI 129 (294)
T ss_dssp HTTCSEEEECCCCSSCSCC----------HHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEcCCcCCCCCC----------HHHHHHHHHHHHHhc
Confidence 9999976653 222 1 11 123466777777765
No 149
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=60.89 E-value=53 Score=30.77 Aligned_cols=79 Identities=14% Similarity=0.198 Sum_probs=55.7
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVR 300 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlG-ET~ee~~e~L~~Lr 300 (376)
...++.+.+.|++.+-.+=-|-+- ..-+.+++.++++.+.+.... .+.-+|+|.| .+-+|.++..+...
T Consensus 31 ~~lv~~li~~Gv~gl~v~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g---~rvpviaGvg~~~t~~ai~la~~a~ 100 (301)
T 3m5v_A 31 ARLIKRQIENGIDAVVPVGTTGES-------ATLTHEEHRTCIEIAVETCKG---TKVKVLAGAGSNATHEAVGLAKFAK 100 (301)
T ss_dssp HHHHHHHHHTTCCEEECSSTTTTG-------GGSCHHHHHHHHHHHHHHHTT---SSCEEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC---CCCeEEEeCCCCCHHHHHHHHHHHH
Confidence 445667778888765332222221 134689999999999886432 1356899994 69999999999999
Q ss_pred HcCCcEEEee
Q 017179 301 AAGVDVMTFG 310 (376)
Q Consensus 301 el~vd~v~~~ 310 (376)
+.|+|.+-+.
T Consensus 101 ~~Gadavlv~ 110 (301)
T 3m5v_A 101 EHGADGILSV 110 (301)
T ss_dssp HTTCSEEEEE
T ss_pred HcCCCEEEEc
Confidence 9999976553
No 150
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=60.84 E-value=69 Score=29.77 Aligned_cols=100 Identities=15% Similarity=0.164 Sum_probs=64.5
Q ss_pred hHHHHHHHH-cCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHH
Q 017179 222 NGCVREVAK-SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKV 299 (376)
Q Consensus 222 ~e~l~~L~~-aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~L 299 (376)
...++.+.+ +|++.+-.+=-|-+- ..-+.+++.++++.+.+... | +.-+|+|. +.+-+|.++..+..
T Consensus 27 ~~lv~~li~~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~-g---rvpviaGvg~~~t~~ai~la~~a 95 (293)
T 1f6k_A 27 RQIIRHNIDKMKVDGLYVGGSTGEN-------FMLSTEEKKEIFRIAKDEAK-D---QIALIAQVGSVNLKEAVELGKYA 95 (293)
T ss_dssp HHHHHHHHHTSCCSEEEESSGGGTG-------GGSCHHHHHHHHHHHHHHHT-T---SSEEEEECCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCcEEEeCccccch-------hhCCHHHHHHHHHHHHHHhC-C---CCeEEEecCCCCHHHHHHHHHHH
Confidence 445666777 888765322112221 13568999999999988543 2 44589999 55889999999999
Q ss_pred HHcCCcEEEe-ecCC-CCCCCCCCCcccCChHHHHHHHHHHHHHh
Q 017179 300 RAAGVDVMTF-GQYM-RPSKRHMPVSEYITPEAFERYRALGMEMG 342 (376)
Q Consensus 300 rel~vd~v~~-~qY~-~P~~~~~~v~~~v~pe~~~~l~~~a~~~g 342 (376)
.+.|+|.+-+ .+|+ .|+ ..+-+++++.+|...+
T Consensus 96 ~~~Gadavlv~~P~y~~~~----------~~~l~~~f~~va~a~~ 130 (293)
T 1f6k_A 96 TELGYDCLSAVTPFYYKFS----------FPEIKHYYDTIIAETG 130 (293)
T ss_dssp HHHTCSEEEEECCCSSCCC----------HHHHHHHHHHHHHHHC
T ss_pred HhcCCCEEEECCCCCCCCC----------HHHHHHHHHHHHHhCC
Confidence 9999996655 3333 221 1234566666666544
No 151
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=60.62 E-value=23 Score=33.99 Aligned_cols=100 Identities=7% Similarity=0.066 Sum_probs=62.2
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCC-CcEEEE-ecCCCCCChHHHHHHHHcCcc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEA-LVPDFRGNNGCVREVAKSGLN 234 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p-~i~Ie~-l~pd~~g~~e~l~~L~~aGld 234 (376)
.+++.+.++++++.+.|+..|.|.....--. ...+.++|+.|++..| ++.|.+ ..-++.--......-.++|++
T Consensus 146 ~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~----P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~ 221 (345)
T 1nvm_A 146 IPAEKLAEQGKLMESYGATCIYMADSGGAMS----MNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCD 221 (345)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECTTCCCC----HHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCccC----HHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCC
Confidence 4678999999999999999998865433222 3568899999999885 777765 222221112223344578988
Q ss_pred cccccccchHHHHHhhcCCCCCHHHHHHHHH
Q 017179 235 VFAHNIETVEELQSAVRDHRANFKQSLDVLM 265 (376)
Q Consensus 235 ~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~ 265 (376)
.+...+-..=+ +......+..+..|+
T Consensus 222 ~vd~tv~GlG~-----~aGN~~le~lv~~L~ 247 (345)
T 1nvm_A 222 RVDASLAGMGA-----GAGNAPLEVFIAVAE 247 (345)
T ss_dssp EEEEBGGGCSS-----TTCBCBHHHHHHHHH
T ss_pred EEEecchhccC-----CccCcCHHHHHHHHH
Confidence 77554322111 113455666666665
No 152
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=60.33 E-value=1e+02 Score=28.05 Aligned_cols=115 Identities=18% Similarity=0.215 Sum_probs=59.4
Q ss_pred hhHHHHHHHHHHCCCcEEEEEeeeCCCCCc-------ccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcC
Q 017179 160 DEPTNVAEAIASWGLDYVVITSVDRDDLAD-------QGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG 232 (376)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsg~r~dl~d-------~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG 232 (376)
+++.+.++++.+.|++-|.| |..-.+ .....+.++.++|++......+.+++-|. ++...+.|
T Consensus 43 ~~~~~~~~~al~~Gv~~vql----R~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liInd~------~~lA~~~g 112 (243)
T 3o63_A 43 GDLAQFAEAALAGGVDIIQL----RDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVNDR------ADIARAAG 112 (243)
T ss_dssp CCHHHHHHHHHHTTCSEEEE----CCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEEESC------HHHHHHHT
T ss_pred chHHHHHHHHHHCCCCEEEE----ccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEEeCH------HHHHHHhC
Confidence 45777888888899998876 321100 01234555555554332111223344332 33455668
Q ss_pred cccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHHHcCCcEEEeec
Q 017179 233 LNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVRAAGVDVMTFGQ 311 (376)
Q Consensus 233 ld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lrel~vd~v~~~q 311 (376)
+|.+..+.+-.+ ...+++..+.+ .++|. --|.+|..+. .+.++|+|.+++
T Consensus 113 AdGVHLg~~dl~-------------------~~~~r~~~~~~------~~iG~S~ht~~Ea~~A----~~~GaDyI~vgp 163 (243)
T 3o63_A 113 ADVLHLGQRDLP-------------------VNVARQILAPD------TLIGRSTHDPDQVAAA----AAGDADYFCVGP 163 (243)
T ss_dssp CSEEEECTTSSC-------------------HHHHHHHSCTT------CEEEEEECSHHHHHHH----HHSSCSEEEECC
T ss_pred CCEEEecCCcCC-------------------HHHHHHhhCCC------CEEEEeCCCHHHHHHH----hhCCCCEEEEcC
Confidence 887655432211 11223322222 34444 4677775443 358999999987
Q ss_pred CC
Q 017179 312 YM 313 (376)
Q Consensus 312 Y~ 313 (376)
.+
T Consensus 164 vf 165 (243)
T 3o63_A 164 CW 165 (243)
T ss_dssp SS
T ss_pred cc
Confidence 55
No 153
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=60.29 E-value=14 Score=35.50 Aligned_cols=87 Identities=16% Similarity=0.202 Sum_probs=50.0
Q ss_pred HHHHHHHcCccccccccc---chHHHHH-hhcCC----CCCHHHH----HHHHHHHHHhC--CCCceEEEeEEEecCCCH
Q 017179 224 CVREVAKSGLNVFAHNIE---TVEELQS-AVRDH----RANFKQS----LDVLMMAKDYV--PAGTLTKTSIMLGCGETP 289 (376)
Q Consensus 224 ~l~~L~~aGld~i~h~lE---tv~~l~~-~vr~r----~~t~e~~----L~vl~~ak~~~--p~Gi~tkt~imvGlGET~ 289 (376)
..+..+++|.|.+..+.- ..+..+. ..+.| +.+.+.+ +++++.+++.. |-++++..+-...-|.+.
T Consensus 149 aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~ 228 (340)
T 3gr7_A 149 GARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTA 228 (340)
T ss_dssp HHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCG
T ss_pred HHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCH
Confidence 345566778777655421 1122211 11111 3345544 67778888765 222222222111126788
Q ss_pred HHHHHHHHHHHHcCCcEEEee
Q 017179 290 DQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 290 ee~~e~L~~Lrel~vd~v~~~ 310 (376)
+|..+.++.|.+.++|++++.
T Consensus 229 ~~~~~la~~L~~~Gvd~i~vs 249 (340)
T 3gr7_A 229 KDYVPYAKRMKEQGVDLVDVS 249 (340)
T ss_dssp GGHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEe
Confidence 999999999999999999995
No 154
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=60.12 E-value=70 Score=29.71 Aligned_cols=77 Identities=12% Similarity=0.119 Sum_probs=53.9
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lr 300 (376)
...++.+.+.|++.+-.+=-|-+ . ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+...
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE-----~--~~Ls~~Er~~v~~~~~~~~~g----r~pviaGvg~~~t~~ai~la~~A~ 92 (292)
T 2vc6_A 24 HDLVEWQIEEGSFGLVPCGTTGE-----S--PTLSKSEHEQVVEITIKTANG----RVPVIAGAGSNSTAEAIAFVRHAQ 92 (292)
T ss_dssp HHHHHHHHHTTCSEEETTSGGGT-----G--GGSCHHHHHHHHHHHHHHHTT----SSCBEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccC-----h--hhCCHHHHHHHHHHHHHHhCC----CCcEEEecCCccHHHHHHHHHHHH
Confidence 44566677888876533211222 1 135788999999999885422 34589999 558899999999999
Q ss_pred HcCCcEEEe
Q 017179 301 AAGVDVMTF 309 (376)
Q Consensus 301 el~vd~v~~ 309 (376)
+.|.|.+-+
T Consensus 93 ~~Gadavlv 101 (292)
T 2vc6_A 93 NAGADGVLI 101 (292)
T ss_dssp HTTCSEEEE
T ss_pred HcCCCEEEE
Confidence 999996554
No 155
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=59.94 E-value=83 Score=26.98 Aligned_cols=132 Identities=13% Similarity=0.098 Sum_probs=76.1
Q ss_pred HHHHHHHHCCCcEEEEEeeeCCCCCcccH----HHHHHHHHHHHhhCCCcEEEEec-CCCCCChHHHHHHHHcCcccccc
Q 017179 164 NVAEAIASWGLDYVVITSVDRDDLADQGS----GHFAQTVRKLKELKPNMLIEALV-PDFRGNNGCVREVAKSGLNVFAH 238 (376)
Q Consensus 164 ~~a~al~~~G~~eIvLTsg~r~dl~d~g~----~~~~elvr~Ik~~~p~i~Ie~l~-pd~~g~~e~l~~L~~aGld~i~h 238 (376)
+.++++.+.| .+|-.=|-.++++..... +.+....+.|++.. +..+..+- |--..+...++.+++.|...+..
T Consensus 47 ~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~-G~~~~~fr~P~G~~~~~~~~~~~~~G~~~v~w 124 (195)
T 2cc0_A 47 SLVRAQVDAG-MWVANHSYTHPHMTQLGQAQMDSEISRTQQAIAGAG-GGTPKLFRPPYGETNATLRSVEAKYGLTEVIW 124 (195)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHTT-SCCCSEECCGGGCCCHHHHHHHHHTTCEECCC
T ss_pred HHHHHHHHCC-CEEEcCCCCccccccCCHHHHHHHHHHHHHHHHHHh-CCCCCEEECCCCCcCHHHHHHHHHCCCeEEEe
Confidence 3456667778 566444444555543222 23444444555443 22223333 22122678888899999888877
Q ss_pred cccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-C--CCHHHHHHHHHHHHHcCCcEEEeecCC
Q 017179 239 NIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-G--ETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (376)
Q Consensus 239 ~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-G--ET~ee~~e~L~~Lrel~vd~v~~~qY~ 313 (376)
++++.+-. ..+.++..+.+ .+.. .| .||+-+ + .|.+.+-+.+..|++.|..++++.+.+
T Consensus 125 ~~d~~Dw~-------~~~~~~i~~~~---~~~~-~g-----~IiL~Hd~~~~t~~al~~ii~~l~~~Gy~~v~l~~~~ 186 (195)
T 2cc0_A 125 DVDSQDWN-------NASTDAIVQAV---SRLG-NG-----QVILMHDWPANTLAAIPRIAQTLAGKGLCSGMISPQT 186 (195)
T ss_dssp SEECCGGG-------TCCHHHHHHHH---HTCC-TT-----CEEEEESSCHHHHHHHHHHHHHHHHTTEEECEECTTT
T ss_pred ccCCCccC-------CCCHHHHHHHH---hCcC-cC-----eEEEECCCchhHHHHHHHHHHHHHHCCCEEEEeCccc
Confidence 77765511 12455555444 2322 23 355555 3 366777888999999999999997554
No 156
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=59.88 E-value=25 Score=34.61 Aligned_cols=121 Identities=13% Similarity=0.196 Sum_probs=70.9
Q ss_pred CchhHHHHHHHHHHCCCcEEEEEeeeCCC----CCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCc
Q 017179 158 DPDEPTNVAEAIASWGLDYVVITSVDRDD----LADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGL 233 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~eIvLTsg~r~d----l~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGl 233 (376)
|.+...+.|+++++.|++.|.++.-..+. +...|.+.+ ..++.+++.. ++.+ ++--| +.+.++.+.+. +
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl-~~L~~~~~~~-Gl~~--~te~~--d~~~~~~l~~~-v 226 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGL-KILKRVSDEY-GLGV--ISEIV--TPADIEVALDY-V 226 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHH-HHHHHHHHHH-TCEE--EEECC--SGGGHHHHTTT-C
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHH-HHHHHHHHHc-CCEE--EEecC--CHHHHHHHHhh-C
Confidence 67888999999999999988876643111 111234444 3444444433 2333 33333 56778888776 8
Q ss_pred ccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCc
Q 017179 234 NVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVD 305 (376)
Q Consensus 234 d~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd 305 (376)
|.+.++--. |. + ...|+.+.+.... +.+++++ .=|.+|+...++.+++.|..
T Consensus 227 d~lkIgs~~-------~~----n----~~LL~~~a~~gkP-Vilk~G~----~~t~~e~~~Ave~i~~~Gn~ 278 (385)
T 3nvt_A 227 DVIQIGARN-------MQ----N----FELLKAAGRVDKP-ILLKRGL----SATIEEFIGAAEYIMSQGNG 278 (385)
T ss_dssp SEEEECGGG-------TT----C----HHHHHHHHTSSSC-EEEECCT----TCCHHHHHHHHHHHHTTTCC
T ss_pred CEEEECccc-------cc----C----HHHHHHHHccCCc-EEEecCC----CCCHHHHHHHHHHHHHcCCC
Confidence 887765211 11 1 2445555443212 4455554 35888888888888887754
No 157
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=59.75 E-value=22 Score=34.20 Aligned_cols=80 Identities=9% Similarity=0.050 Sum_probs=52.6
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeee-CCC--CCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcC
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVD-RDD--LADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG 232 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~-r~d--l~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG 232 (376)
.++.+|..+.++.+.+.|+++|.++.+. ..+ .+. +..+..+.++.|++.. ++.|- ..+.+. +.+..+.+.+.|
T Consensus 235 g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~-~~~~~~~~~~~ir~~~-~iPVi-~~Ggi~-t~e~a~~~l~~G 310 (349)
T 3hgj_A 235 GWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPL-APGFQVPFADAVRKRV-GLRTG-AVGLIT-TPEQAETLLQAG 310 (349)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCC-CTTTTHHHHHHHHHHH-CCEEE-ECSSCC-CHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCC-CccccHHHHHHHHHHc-CceEE-EECCCC-CHHHHHHHHHCC
Confidence 4678899999999999999999999542 211 111 1123456677777754 23332 233332 677888888888
Q ss_pred -ccccccc
Q 017179 233 -LNVFAHN 239 (376)
Q Consensus 233 -ld~i~h~ 239 (376)
+|.+..+
T Consensus 311 ~aD~V~iG 318 (349)
T 3hgj_A 311 SADLVLLG 318 (349)
T ss_dssp SCSEEEES
T ss_pred CceEEEec
Confidence 8888765
No 158
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=59.53 E-value=19 Score=34.85 Aligned_cols=57 Identities=19% Similarity=0.268 Sum_probs=43.1
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCC-CCc-cc------HHHHHHHHHHHHhhCCCcEEE
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDD-LAD-QG------SGHFAQTVRKLKELKPNMLIE 212 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~d-l~d-~g------~~~~~elvr~Ik~~~p~i~Ie 212 (376)
.++.+.+.+.++.+.++|++-|.|=|+-... ..| .| ..-+...|+.||+.+|++.|-
T Consensus 65 r~sid~l~~~~~~~~~lGi~~v~LFgv~~~~~~KD~~gs~A~~~~g~v~rair~iK~~~pdl~Vi 129 (342)
T 1h7n_A 65 RIGVNRLKDYLKPLVAKGLRSVILFGVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYFPELYII 129 (342)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEEEEECCSTTCCBTTCGGGGCTTSHHHHHHHHHHHHCTTSEEE
T ss_pred eeCHHHHHHHHHHHHHCCCCEEEEecccCccCCCCccccccCCCCChHHHHHHHHHHHCCCeEEE
Confidence 3789999999999999999999999983210 111 11 124778999999999997663
No 159
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=59.34 E-value=64 Score=30.16 Aligned_cols=100 Identities=18% Similarity=0.282 Sum_probs=64.6
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lr 300 (376)
...++.+.++|++.+-.+=-|-+- ..-+.+++.++++.+.+... | +.-+|+|. +.+-+|.++..+...
T Consensus 24 ~~lv~~li~~Gv~gi~v~GttGE~-------~~Ls~~Er~~v~~~~~~~~~-g---rvpviaGvg~~~t~~ai~la~~A~ 92 (297)
T 2rfg_A 24 AGLVDWQIKHGAHGLVPVGTTGES-------PTLTEEEHKRVVALVAEQAQ-G---RVPVIAGAGSNNPVEAVRYAQHAQ 92 (297)
T ss_dssp HHHHHHHHHTTCSEEECSSGGGTG-------GGSCHHHHHHHHHHHHHHHT-T---SSCBEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccch-------hhCCHHHHHHHHHHHHHHhC-C---CCeEEEccCCCCHHHHHHHHHHHH
Confidence 445666778888765332112221 13568899999999988543 2 34589999 558899999999999
Q ss_pred HcCCcEEEee-cCC-CCCCCCCCCcccCChHHHHHHHHHHHHHh
Q 017179 301 AAGVDVMTFG-QYM-RPSKRHMPVSEYITPEAFERYRALGMEMG 342 (376)
Q Consensus 301 el~vd~v~~~-qY~-~P~~~~~~v~~~v~pe~~~~l~~~a~~~g 342 (376)
+.|+|.+-+. +|+ .|+ ..+-+++++.+|...+
T Consensus 93 ~~Gadavlv~~P~y~~~s----------~~~l~~~f~~va~a~~ 126 (297)
T 2rfg_A 93 QAGADAVLCVAGYYNRPS----------QEGLYQHFKMVHDAID 126 (297)
T ss_dssp HHTCSEEEECCCTTTCCC----------HHHHHHHHHHHHHHCS
T ss_pred hcCCCEEEEcCCCCCCCC----------HHHHHHHHHHHHHhcC
Confidence 9999976553 332 221 1233566666666544
No 160
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=59.16 E-value=34 Score=33.00 Aligned_cols=52 Identities=15% Similarity=0.353 Sum_probs=35.7
Q ss_pred HHHHHHHHHHhCCCCce--EEEeEE--EecC-CCHHHHHHHHHHHHHcCCcEEEeec
Q 017179 260 SLDVLMMAKDYVPAGTL--TKTSIM--LGCG-ETPDQVVSTMEKVRAAGVDVMTFGQ 311 (376)
Q Consensus 260 ~L~vl~~ak~~~p~Gi~--tkt~im--vGlG-ET~ee~~e~L~~Lrel~vd~v~~~q 311 (376)
.+++++.+++..+..++ ++.+.- ..-| .+.+|..+.++.|.+.++|++++..
T Consensus 211 ~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~ 267 (363)
T 3l5l_A 211 LLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSV 267 (363)
T ss_dssp HHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 36788888887653332 233321 1114 6788999999999999999999863
No 161
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=59.02 E-value=75 Score=29.85 Aligned_cols=149 Identities=11% Similarity=0.060 Sum_probs=78.4
Q ss_pred CcCCCCCCCCCCCCCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHH---HHHHHHHHHHhhCCCcEEEEecC-CC
Q 017179 143 CRFCNVKTSRAPPPPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSG---HFAQTVRKLKELKPNMLIEALVP-DF 218 (376)
Q Consensus 143 C~FC~v~~~r~~~~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~---~~~elvr~Ik~~~p~i~Ie~l~p-d~ 218 (376)
|.-+.||.+. .+.+..+.+++.+.+.|.++|-+.-- ...+.++..+ .+.+-|+++++..++..+.+++. .+
T Consensus 93 ~tVigFP~G~----~~~~~Kv~E~~~Av~~GAdEIDmVin-ig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~ 167 (281)
T 2a4a_A 93 ACVINFPYGT----DSMEKVLNDTEKALDDGADEIDLVIN-YKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGE 167 (281)
T ss_dssp EEEESTTTCC----SCHHHHHHHHHHHHHHTCSEEEEECC-HHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHH
T ss_pred EEEeCCCCCC----CCHHHHHHHHHHHHHcCCCEEEEecc-hHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEeccc
Confidence 4445566443 34666777888888999999976531 1111122234 66777788877665566665442 11
Q ss_pred CCChH----HHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHh-------CCCCceEEEeEEEecCC
Q 017179 219 RGNNG----CVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDY-------VPAGTLTKTSIMLGCGE 287 (376)
Q Consensus 219 ~g~~e----~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~-------~p~Gi~tkt~imvGlGE 287 (376)
..+++ ..+...++|+|.+--+ - -+- +.+++.++..-..+.+++. .+ .+.+|... |.-
T Consensus 168 L~d~e~i~~A~~ia~eaGADfVKTS----T---Gf~-~~gAT~edv~lm~~~v~~~~~~~~~tg~-~vgVKaaG--GIr- 235 (281)
T 2a4a_A 168 LKTEDLIIKTTLAVLNGNADFIKTS----T---GKV-QINATPSSVEYIIKAIKEYIKNNPEKNN-KIGLKVSG--GIS- 235 (281)
T ss_dssp HCSHHHHHHHHHHHHTTTCSEEECC----C---SCS-SCCCCHHHHHHHHHHHHHHHHHCGGGTT-CCEEEEES--SCC-
T ss_pred CCcHHHHHHHHHHHHHhCCCEEEeC----C---CCC-CCCCCHHHHHHHHHHHHHhhcccccCCC-CceEEEeC--CCC-
Confidence 11334 2345557788866332 0 001 1356666654444444322 22 24555443 333
Q ss_pred CHHHHHHHHHHHHH-cCCcEEE
Q 017179 288 TPDQVVSTMEKVRA-AGVDVMT 308 (376)
Q Consensus 288 T~ee~~e~L~~Lre-l~vd~v~ 308 (376)
|.+|.++.++.-.+ +|.++++
T Consensus 236 t~e~al~~i~aga~~lG~~w~~ 257 (281)
T 2a4a_A 236 DLNTASHYILLARRFLSSLACH 257 (281)
T ss_dssp SHHHHHHHHHHHHHHTC-----
T ss_pred CHHHHHHHHHHhhhhccccccc
Confidence 88888888877664 5655544
No 162
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=59.01 E-value=21 Score=34.79 Aligned_cols=134 Identities=16% Similarity=0.203 Sum_probs=70.2
Q ss_pred chhH-HHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEE-EEecCCCCCCh-HHHHHHHHcCccc
Q 017179 159 PDEP-TNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLI-EALVPDFRGNN-GCVREVAKSGLNV 235 (376)
Q Consensus 159 ~eEi-~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~I-e~l~pd~~g~~-e~l~~L~~aGld~ 235 (376)
..++ ...++.+++.|+-.++ |-.+..+.+... +... |.+..|+..+ -.+.++. .. +..+.+...|.|.
T Consensus 101 ~~~in~~lA~~a~~~G~~~~v--Gs~~~~le~~~~----~~~~-v~r~~P~~~~ianig~~~--~~e~~~~~ve~~~ada 171 (365)
T 3sr7_A 101 GKEVNEKLAQVADTCGLLFVT--GSYSTALKNPDD----TSYQ-VKKSRPHLLLATNIGLDK--PYQAGLQAVRDLQPLF 171 (365)
T ss_dssp CHHHHHHHHHHHHHHTCCEEC------------------------------CCEEEEEETTS--CHHHHHHHHHHHCCSC
T ss_pred hhHHHHHHHHHHHHcCCCeec--ccccccccCccc----cceE-ehhhCCCCcEEEEeCCCC--CHHHHHHHHHhcCCCE
Confidence 3444 3456777888886664 211212222101 1111 2222365433 2333333 33 3445555778888
Q ss_pred ccccccchHHHHHhhcCC-CCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeec
Q 017179 236 FAHNIETVEELQSAVRDH-RANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQ 311 (376)
Q Consensus 236 i~h~lEtv~~l~~~vr~r-~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~q 311 (376)
+..++....++ +.|. ..+++.|++.|+.+++..+.-+.+| . +|+|-+.++ .+.+.+.|+|.|.++.
T Consensus 172 l~ihln~~qe~---~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK--~-vg~g~s~e~----A~~l~~aGad~I~V~g 238 (365)
T 3sr7_A 172 LQVHINLMQEL---LMPEGEREFRSWKKHLSDYAKKLQLPFILK--E-VGFGMDVKT----IQTAIDLGVKTVDISG 238 (365)
T ss_dssp EEEEECHHHHH---TSSSSCCCCHHHHHHHHHHHHHCCSCEEEE--E-CSSCCCHHH----HHHHHHHTCCEEECCC
T ss_pred EEEeccccccc---cCCCCCCcHHHHHHHHHHHHHhhCCCEEEE--E-CCCCCCHHH----HHHHHHcCCCEEEEeC
Confidence 88776655433 3322 3457889999999999753213345 2 688888765 4567788999998853
No 163
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=58.90 E-value=29 Score=30.72 Aligned_cols=78 Identities=15% Similarity=0.280 Sum_probs=51.5
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCc--ccHHHHHHHHHHHHhhCC-CcEEEEecCCCCCChHHHHHHHHcCc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLAD--QGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSGL 233 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d--~g~~~~~elvr~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aGl 233 (376)
.|++...+.++++.+.|++.+.|.-.|..-.+. .| .+.+++|++..+ .+.+.+.+-+ ..+.++.+.++|+
T Consensus 20 ~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~----~~~i~~l~~~~~~~~~v~l~vnd---~~~~v~~~~~~Ga 92 (230)
T 1rpx_A 20 ANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIG----PLVVDSLRPITDLPLDVHLMIVE---PDQRVPDFIKAGA 92 (230)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCC----HHHHHHHGGGCCSCEEEEEESSS---HHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeeccCCcccccccC----HHHHHHHHhccCCcEEEEEEecC---HHHHHHHHHHcCC
Confidence 577888889999999999988886444322221 22 467888887652 2445544432 1347888899999
Q ss_pred cccccccc
Q 017179 234 NVFAHNIE 241 (376)
Q Consensus 234 d~i~h~lE 241 (376)
|.+....+
T Consensus 93 d~v~vh~~ 100 (230)
T 1rpx_A 93 DIVSVHCE 100 (230)
T ss_dssp SEEEEECS
T ss_pred CEEEEEec
Confidence 98864433
No 164
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=58.46 E-value=95 Score=34.09 Aligned_cols=171 Identities=11% Similarity=0.107 Sum_probs=100.4
Q ss_pred CchhHHHHHHHHHHCCCcEEEEEeeeCCC--CCc------ccHHHHHHHHHHHHhhCC-CcEEEEecCCCCCChHHHHHH
Q 017179 158 DPDEPTNVAEAIASWGLDYVVITSVDRDD--LAD------QGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREV 228 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~eIvLTsg~r~d--l~d------~g~~~~~elvr~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L 228 (376)
++++..+.++.+.+.|++.|.|.-+-... ..+ ...+.+.++|+.+++... -+.+. +.|+.....+..+.+
T Consensus 646 ~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK-~~~~~~~~~~~a~~~ 724 (1025)
T 1gte_A 646 NKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAK-LTPNVTDIVSIARAA 724 (1025)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEE-ECSCSSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEE-eCCChHHHHHHHHHH
Confidence 57888888888889999999997652111 001 124678889999988642 14444 456653235667888
Q ss_pred HHcCcccccc-c---------ccchH-HH--------HHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCH
Q 017179 229 AKSGLNVFAH-N---------IETVE-EL--------QSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETP 289 (376)
Q Consensus 229 ~~aGld~i~h-~---------lEtv~-~l--------~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ 289 (376)
.++|+|.+.. | +|... .. ..-+. ....+...++.+..+++..+. +++ |..|=-.|.
T Consensus 725 ~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~s-g~~~~~~~~~~v~~v~~~~~~-ipv---i~~GGI~s~ 799 (1025)
T 1gte_A 725 KEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVS-GTAIRPIALRAVTTIARALPG-FPI---LATGGIDSA 799 (1025)
T ss_dssp HHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEE-SGGGHHHHHHHHHHHHHHSTT-CCE---EEESSCCSH
T ss_pred HHcCCCEEEEeccccccccccccccccccccccccccCCCCC-cccchhHHHHHHHHHHHHcCC-CCE---EEecCcCCH
Confidence 8999997754 1 11000 00 00011 112344457788888876533 432 223334799
Q ss_pred HHHHHHHHHHHHcCCcEEEeecCC-C-CCCCCCCCcccCChHHHHHHHHHHHHHhhhhh
Q 017179 290 DQVVSTMEKVRAAGVDVMTFGQYM-R-PSKRHMPVSEYITPEAFERYRALGMEMGFRYV 346 (376)
Q Consensus 290 ee~~e~L~~Lrel~vd~v~~~qY~-~-P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~ 346 (376)
+|..+.|. .|.+.|-++.-+ . | . .+..+-.+.++.+....||..+
T Consensus 800 ~da~~~l~----~Ga~~v~vg~~~l~~~----~----~~~~~~~~~l~~~l~~~G~~~i 846 (1025)
T 1gte_A 800 ESGLQFLH----SGASVLQVCSAVQNQD----F----TVIQDYCTGLKALLYLKSIEEL 846 (1025)
T ss_dssp HHHHHHHH----TTCSEEEESHHHHTSC----T----THHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHH----cCCCEEEEeeccccCC----c----cHHHHHHHHHHHHHHHcCCCCH
Confidence 99988875 699999887422 1 2 1 1113345566777777888644
No 165
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=57.86 E-value=75 Score=29.88 Aligned_cols=77 Identities=6% Similarity=0.031 Sum_probs=51.0
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lr 300 (376)
...++.+.++|++.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+...
T Consensus 32 ~~lv~~li~~Gv~gl~v~GtTGE~-------~~Ls~~Er~~v~~~~~~~~~g----rvpviaGvg~~~t~~ai~la~~A~ 100 (309)
T 3fkr_A 32 KRAVDFMIDAGSDGLCILANFSEQ-------FAITDDERDVLTRTILEHVAG----RVPVIVTTSHYSTQVCAARSLRAQ 100 (309)
T ss_dssp HHHHHHHHHTTCSCEEESSGGGTG-------GGSCHHHHHHHHHHHHHHHTT----SSCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccCc-------ccCCHHHHHHHHHHHHHHhCC----CCcEEEecCCchHHHHHHHHHHHH
Confidence 345666677787754332122221 134678888888888875322 45678888 468888889999999
Q ss_pred HcCCcEEEe
Q 017179 301 AAGVDVMTF 309 (376)
Q Consensus 301 el~vd~v~~ 309 (376)
+.|+|.+-+
T Consensus 101 ~~Gadavlv 109 (309)
T 3fkr_A 101 QLGAAMVMA 109 (309)
T ss_dssp HTTCSEEEE
T ss_pred HcCCCEEEE
Confidence 999886554
No 166
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=57.76 E-value=53 Score=30.88 Aligned_cols=76 Identities=14% Similarity=0.191 Sum_probs=52.9
Q ss_pred HHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHHH
Q 017179 223 GCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVRA 301 (376)
Q Consensus 223 e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlG-ET~ee~~e~L~~Lre 301 (376)
..++.+.+.|++.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|.| .+-+|.++..+...+
T Consensus 39 ~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~~Er~~v~~~~~~~~~g----r~pviaGvg~~~t~~ai~la~~A~~ 107 (307)
T 3s5o_A 39 ENLHKLGTFPFRGFVVQGSNGEF-------PFLTSSERLEVVSRVRQAMPK----NRLLLAGSGCESTQATVEMTVSMAQ 107 (307)
T ss_dssp HHHHHHTTSCCSEEEESSGGGTG-------GGSCHHHHHHHHHHHHHTSCT----TSEEEEECCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECccccch-------hhCCHHHHHHHHHHHHHHcCC----CCcEEEecCCCCHHHHHHHHHHHHH
Confidence 34556667777654322122221 135688999999999986432 446889994 699999999999999
Q ss_pred cCCcEEEe
Q 017179 302 AGVDVMTF 309 (376)
Q Consensus 302 l~vd~v~~ 309 (376)
.|+|.+-+
T Consensus 108 ~Gadavlv 115 (307)
T 3s5o_A 108 VGADAAMV 115 (307)
T ss_dssp TTCSEEEE
T ss_pred cCCCEEEE
Confidence 99997655
No 167
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=57.54 E-value=17 Score=32.93 Aligned_cols=75 Identities=19% Similarity=0.162 Sum_probs=49.9
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccc
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h 238 (376)
..++.+.++++.+.|++.|.++..+.+... .| ...+.++.|++.. ++.+-+ ..+..+.+.+..+.++|+|.+-.
T Consensus 29 ~~~~~~~a~~~~~~Ga~~i~v~d~~~~~~~-~g--~~~~~i~~i~~~~-~iPvi~--~ggi~~~~~i~~~~~~Gad~v~l 102 (266)
T 2w6r_A 29 GILLRDWVVEVEKRGAGEILLTSIDRDGTK-SG--YDTEMIRFVRPLT-TLPIIA--SGGAGKMEHFLEAFLAGADKALA 102 (266)
T ss_dssp EEEHHHHHHHHHHHTCSEEEEEETTTSSCS-SC--CCHHHHHHHGGGC-CSCEEE--ESCCCSTHHHHHHHHHTCSEEEC
T ss_pred CCCHHHHHHHHHHCCCCEEEEEecCcccCC-Cc--ccHHHHHHHHHhc-CCCEEE--ECCCCCHHHHHHHHHcCCcHhhh
Confidence 356788899999999999999865443211 11 2357888888764 343332 22333567788888999997766
Q ss_pred c
Q 017179 239 N 239 (376)
Q Consensus 239 ~ 239 (376)
+
T Consensus 103 g 103 (266)
T 2w6r_A 103 A 103 (266)
T ss_dssp C
T ss_pred h
Confidence 4
No 168
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=57.37 E-value=61 Score=30.89 Aligned_cols=77 Identities=13% Similarity=0.141 Sum_probs=54.0
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lr 300 (376)
...++.+.+.|++.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+...
T Consensus 58 ~~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~eEr~~vi~~~ve~~~g----rvpViaGvg~~st~eai~la~~A~ 126 (332)
T 2r8w_A 58 SALIARLDAAEVDSVGILGSTGIY-------MYLTREERRRAIEAAATILRG----RRTLMAGIGALRTDEAVALAKDAE 126 (332)
T ss_dssp HHHHHHHHHHTCSEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT----SSEEEEEECCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC----CCcEEEecCCCCHHHHHHHHHHHH
Confidence 445666777887765332112221 135688999999999886432 34589999 458899999999999
Q ss_pred HcCCcEEEe
Q 017179 301 AAGVDVMTF 309 (376)
Q Consensus 301 el~vd~v~~ 309 (376)
+.|+|.+-+
T Consensus 127 ~~Gadavlv 135 (332)
T 2r8w_A 127 AAGADALLL 135 (332)
T ss_dssp HHTCSEEEE
T ss_pred hcCCCEEEE
Confidence 999997655
No 169
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=56.97 E-value=62 Score=29.52 Aligned_cols=137 Identities=15% Similarity=0.150 Sum_probs=68.0
Q ss_pred HHHHHHHHHHCCCcEEEEEeeeCCCCCccc-HHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccc
Q 017179 162 PTNVAEAIASWGLDYVVITSVDRDDLADQG-SGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNI 240 (376)
Q Consensus 162 i~~~a~al~~~G~~eIvLTsg~r~dl~d~g-~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~l 240 (376)
+.+..+++.+.|+++|+++...- ..|. ...+.+.++..+..+|. |.+..| +..+++.++.+.++=.+.++-.
T Consensus 62 i~~aL~~l~~~G~~~vvV~Pl~l---~~G~~~~di~~~v~~~~~~~~~--i~~~~p-l~~~~~~~~~l~~~l~~~~~~~- 134 (264)
T 2xwp_A 62 PLQALQKLAAQGYQDVAIQSLHI---INGDEYEKIVREVQLLRPLFTR--LTLGVP-LLSSHNDYVQLMQALRQQMPSL- 134 (264)
T ss_dssp HHHHHHHHHHHTCCEEEEEECCS---SSSHHHHHHHHHHHHHGGGCSE--EEEECC-SSCSHHHHHHHHHHHHTTSCCC-
T ss_pred HHHHHHHHHhCCCCEEEEEeCcc---cCcHHHHHHHHHHHHHHhhCCc--eEEecC-CCCCHHHHHHHHHHHHHhcccc-
Confidence 34455678889999999987642 2211 22344444555555564 443333 3335554444443311111100
Q ss_pred cchHHHHHhhc-CCCCCHHHHHHHHH-HHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecCC
Q 017179 241 ETVEELQSAVR-DHRANFKQSLDVLM-MAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (376)
Q Consensus 241 Etv~~l~~~vr-~r~~t~e~~L~vl~-~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY~ 313 (376)
..-+.+. .|. +-+.........+. .+++. |. .+-+|+-|..-.+.+.++.|.+.|+..|.+.+||
T Consensus 135 ~~~~~lv-l~gHGs~~~~~~~~~~~a~~l~~~---~~----~v~~g~~e~~P~~~~~l~~l~~~G~~~v~v~P~~ 201 (264)
T 2xwp_A 135 RQTEKVV-FMGHGASHHAFAAYACLDHMMTAQ---RF----PARVGAVESYPEVDILIDSLRDEGVTGVHLMPLM 201 (264)
T ss_dssp CTTEEEE-EEECCCSSGGGHHHHHHHHHHHHT---TC----SEEEEESSSSSCHHHHHHHHHHHTCCEEEEEECS
T ss_pred CCCCeEE-EEECCCCchhhHHHHHHHHHHHhh---CC----CEEEEEeCCCCCHHHHHHHHHHCCCCEEEEEeee
Confidence 0000000 000 00001122233333 33442 31 4567775666778889999999999888787775
No 170
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=56.97 E-value=1.1e+02 Score=27.45 Aligned_cols=115 Identities=18% Similarity=0.145 Sum_probs=66.7
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcE-EEEecCC-----C-C-CChHHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNML-IEALVPD-----F-R-GNNGCVREV 228 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~-Ie~l~pd-----~-~-g~~e~l~~L 228 (376)
.+++.+.+.|++..+.|..-|...+ .+.|++|++.. ++. +...--| + . .+.+.+..+
T Consensus 33 ~~~~~~~~~A~a~~~~Ga~~i~~~~--------------~~~i~~ir~~v-~~Pvig~~k~d~~~~~~~I~~~~~~i~~~ 97 (232)
T 3igs_A 33 DKPEIVAAMALAAEQAGAVAVRIEG--------------IDNLRMTRSLV-SVPIIGIIKRDLDESPVRITPFLDDVDAL 97 (232)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEES--------------HHHHHHHHTTC-CSCEEEECBCCCSSCCCCBSCSHHHHHHH
T ss_pred CCcchHHHHHHHHHHCCCeEEEECC--------------HHHHHHHHHhc-CCCEEEEEeecCCCcceEeCccHHHHHHH
Confidence 5678899999999999998776521 23577787764 233 2211212 1 1 134678889
Q ss_pred HHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEE
Q 017179 229 AKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMT 308 (376)
Q Consensus 229 ~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~ 308 (376)
.++|+|.+-.. +.. ..+ . +..-++++.+++ .|+.+-.++ -|.++. +.+.+.|+|+|.
T Consensus 98 ~~~Gad~V~l~--~~~----~~~--p---~~l~~~i~~~~~---~g~~v~~~v-----~t~eea----~~a~~~Gad~Ig 154 (232)
T 3igs_A 98 AQAGAAIIAVD--GTA----RQR--P---VAVEALLARIHH---HHLLTMADC-----SSVDDG----LACQRLGADIIG 154 (232)
T ss_dssp HHHTCSEEEEE--CCS----SCC--S---SCHHHHHHHHHH---TTCEEEEEC-----CSHHHH----HHHHHTTCSEEE
T ss_pred HHcCCCEEEEC--ccc----cCC--H---HHHHHHHHHHHH---CCCEEEEeC-----CCHHHH----HHHHhCCCCEEE
Confidence 99999987442 110 011 1 233345555555 245443333 355443 456678999986
Q ss_pred e
Q 017179 309 F 309 (376)
Q Consensus 309 ~ 309 (376)
+
T Consensus 155 ~ 155 (232)
T 3igs_A 155 T 155 (232)
T ss_dssp C
T ss_pred E
Confidence 4
No 171
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=56.95 E-value=1.4e+02 Score=28.71 Aligned_cols=127 Identities=16% Similarity=0.244 Sum_probs=74.6
Q ss_pred HHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccc--
Q 017179 163 TNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNI-- 240 (376)
Q Consensus 163 ~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~l-- 240 (376)
.+.++.+.+.|++.|+|.....+ ...+.+.|+.+++.+ ++.|-+ ... .+.+.++.+.++|+|.+-.+.
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~------~~~~~~~i~~i~~~~-~~~Viv--g~v-~t~e~A~~l~~aGaD~I~VG~~~ 176 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGH------SLNIIRTLKEIKSKM-NIDVIV--GNV-VTEEATKELIENGADGIKVGIGP 176 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCS------BHHHHHHHHHHHHHC-CCEEEE--EEE-CSHHHHHHHHHTTCSEEEECSSC
T ss_pred HHHHHHHHHcCcCeEEEeCCCCC------cHHHHHHHHHHHHhc-CCcEEE--ccC-CCHHHHHHHHHcCcCEEEEecCC
Confidence 66788888999999988544321 345788999998876 343322 111 167888999999999886543
Q ss_pred ---cchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHHHcCCcEEEeecCC
Q 017179 241 ---ETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (376)
Q Consensus 241 ---Etv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlG-ET~ee~~e~L~~Lrel~vd~v~~~qY~ 313 (376)
.+...+ .-+. ..++....++.+.+++. +++ +|..-| -+.+|+.+.+. +|.+.|-++..+
T Consensus 177 Gs~~~tr~~-~g~g--~p~~~~i~~v~~~~~~~---~iP----VIA~GGI~~~~di~kala----~GAd~V~vGs~~ 239 (361)
T 3khj_A 177 GSICTTRIV-AGVG--VPQITAIEKCSSVASKF---GIP----IIADGGIRYSGDIGKALA----VGASSVMIGSIL 239 (361)
T ss_dssp CTTCCHHHH-TCBC--CCHHHHHHHHHHHHHHH---TCC----EEEESCCCSHHHHHHHHH----HTCSEEEESTTT
T ss_pred CcCCCcccc-cCCC--CCcHHHHHHHHHHHhhc---CCe----EEEECCCCCHHHHHHHHH----cCCCEEEEChhh
Confidence 222211 1111 12233333333333332 233 343333 47888777664 589988888665
No 172
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=56.84 E-value=80 Score=25.80 Aligned_cols=77 Identities=21% Similarity=0.364 Sum_probs=48.8
Q ss_pred CchhHHHHHHHHHHCCCcEEEEEeee------------------CCCCCcccHHHHHHHHHHHHhhCCCcEEEEe-cCCC
Q 017179 158 DPDEPTNVAEAIASWGLDYVVITSVD------------------RDDLADQGSGHFAQTVRKLKELKPNMLIEAL-VPDF 218 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~eIvLTsg~------------------r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l-~pd~ 218 (376)
+|+-+.++++.+.+.|++-++|-|-. -....| .+.|-+-|+.|-+.+|++.+-++ +.|-
T Consensus 11 dpeilkeivreikrqgvrvvllysdqdekrrrerleefekqgvdvrtved--kedfrenireiwerypqldvvvivttdd 88 (162)
T 2l82_A 11 DPEILKEIVREIKRQGVRVVLLYSDQDEKRRRERLEEFEKQGVDVRTVED--KEDFRENIREIWERYPQLDVVVIVTTDD 88 (162)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSCHHHHHHHHHHHHTTTCEEEECCS--HHHHHHHHHHHHHHCTTCCEEEEEECCC
T ss_pred CHHHHHHHHHHHHhCCeEEEEEecCchHHHHHHHHHHHHHcCCceeeecc--HHHHHHHHHHHHHhCCCCcEEEEEecCc
Confidence 46656677889999999988887642 001122 56788899999999998755443 3221
Q ss_pred C-CChHHHHHHHHcCcccc
Q 017179 219 R-GNNGCVREVAKSGLNVF 236 (376)
Q Consensus 219 ~-g~~e~l~~L~~aGld~i 236 (376)
. -..+.++..++-|+.++
T Consensus 89 kewikdfieeakergvevf 107 (162)
T 2l82_A 89 KEWIKDFIEEAKERGVEVF 107 (162)
T ss_dssp HHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHhcCcEEE
Confidence 0 01344566666777665
No 173
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=56.77 E-value=70 Score=30.65 Aligned_cols=77 Identities=14% Similarity=0.232 Sum_probs=54.1
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lr 300 (376)
...++.+.++|++.+-.+=-|-+- ..-+.+++.++++.+.+... | +.-+|+|. +.+-+|.++..+...
T Consensus 55 ~~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~eEr~~vi~~~ve~~~-g---rvpViaGvg~~st~eai~la~~A~ 123 (343)
T 2v9d_A 55 AALIDDLIKAGVDGLFFLGSGGEF-------SQLGAEERKAIARFAIDHVD-R---RVPVLIGTGGTNARETIELSQHAQ 123 (343)
T ss_dssp HHHHHHHHHTTCSCEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHT-T---SSCEEEECCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCccccCh-------hhCCHHHHHHHHHHHHHHhC-C---CCcEEEecCCCCHHHHHHHHHHHH
Confidence 445666778888765332112221 13568899999999988543 2 44689999 478899999999999
Q ss_pred HcCCcEEEe
Q 017179 301 AAGVDVMTF 309 (376)
Q Consensus 301 el~vd~v~~ 309 (376)
++|+|.+-+
T Consensus 124 ~~Gadavlv 132 (343)
T 2v9d_A 124 QAGADGIVV 132 (343)
T ss_dssp HHTCSEEEE
T ss_pred hcCCCEEEE
Confidence 999996544
No 174
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=56.63 E-value=21 Score=33.87 Aligned_cols=77 Identities=14% Similarity=0.161 Sum_probs=50.2
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEE-ecCCCC-CChHHHHHHHHcCcc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA-LVPDFR-GNNGCVREVAKSGLN 234 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~-l~pd~~-g~~e~l~~L~~aGld 234 (376)
.+++.+.+.++++.+.|++.|.|-=-.. +. -...+.++|+.|++..|++.|++ ..-|+. +....+. -.++|++
T Consensus 154 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G--~~--~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~la-Av~aGa~ 228 (307)
T 1ydo_A 154 VPIEQVIRLSEALFEFGISELSLGDTIG--AA--NPAQVETVLEALLARFPANQIALHFHDTRGTALANMVT-ALQMGIT 228 (307)
T ss_dssp CCHHHHHHHHHHHHHHTCSCEEEECSSC--CC--CHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHH-HHHHTCC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEcCCCC--Cc--CHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHH-HHHhCCC
Confidence 5789999999999999999988851111 11 14568899999998888766654 222321 1123333 3467888
Q ss_pred cccc
Q 017179 235 VFAH 238 (376)
Q Consensus 235 ~i~h 238 (376)
.+..
T Consensus 229 ~vd~ 232 (307)
T 1ydo_A 229 VFDG 232 (307)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 175
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=56.37 E-value=19 Score=34.63 Aligned_cols=55 Identities=24% Similarity=0.305 Sum_probs=42.7
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCc-cc------HHHHHHHHHHHHhhCCCcEEE
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLAD-QG------SGHFAQTVRKLKELKPNMLIE 212 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d-~g------~~~~~elvr~Ik~~~p~i~Ie 212 (376)
.++.+.+.+.++.+.++|++.|.|=|+.. ..| .| ..-+...|+.||+.+|++.|-
T Consensus 54 r~sid~l~~~~~~~~~lGi~~v~LFgvp~--~Kd~~gs~A~~~~g~v~rair~iK~~~pdl~vi 115 (323)
T 1l6s_A 54 RIPEKHLAREIERIANAGIRSVMTFGISH--HTDETGSDAWREDGLVARMSRICKQTVPEMIVM 115 (323)
T ss_dssp EEEGGGHHHHHHHHHHHTCCEEEEEEECS--SCBSSCGGGGSTTSHHHHHHHHHHHHCTTSEEE
T ss_pred eeCHHHHHHHHHHHHHCCCCEEEEeCCCC--CCCccccccCCCCCcHHHHHHHHHHHCCCeEEE
Confidence 37899999999999999999999999831 122 11 124778999999999997663
No 176
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=55.69 E-value=16 Score=35.14 Aligned_cols=57 Identities=21% Similarity=0.277 Sum_probs=41.5
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCc-ccH------HHHHHHHHHHHhhCCCcEEE
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLAD-QGS------GHFAQTVRKLKELKPNMLIE 212 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d-~g~------~~~~elvr~Ik~~~p~i~Ie 212 (376)
.++.+.+.+.++.+.++|++-|.|=|+......| .|. .-+...|+.||+.+|++.|-
T Consensus 55 r~sid~l~~~~~~~~~~Gi~~v~LFgvp~~~~Kd~~gs~A~~~~g~v~~air~iK~~~pdl~vi 118 (330)
T 1pv8_A 55 RYGVKRLEEMLRPLVEEGLRCVLIFGVPSRVPKDERGSAADSEESPAIEAIHLLRKTFPNLLVA 118 (330)
T ss_dssp EECHHHHHHHHHHHHHHTCCEEEEEECC--------------CCSHHHHHHHHHHHHSTTSEEE
T ss_pred eecHHHHHHHHHHHHHCCCCEEEEecCCcccCCCccccccCCCCChHHHHHHHHHHHCCCeEEE
Confidence 3789999999999999999999999883221122 111 14778999999999997663
No 177
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=55.56 E-value=48 Score=33.16 Aligned_cols=81 Identities=12% Similarity=0.159 Sum_probs=53.6
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCC--CC-----Ccc---cH---HHHHHHHHHHHhhCC-CcEEEEecCCCCCCh
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRD--DL-----ADQ---GS---GHFAQTVRKLKELKP-NMLIEALVPDFRGNN 222 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~--dl-----~d~---g~---~~~~elvr~Ik~~~p-~i~Ie~l~pd~~g~~ 222 (376)
++.+++.+.|+.+.+.|++.|++++.... |+ ..+ |. ..-.+++++|++..+ ++.|-.. +... +.
T Consensus 308 ~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~-GGI~-s~ 385 (443)
T 1tv5_A 308 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIAS-GGIF-SG 385 (443)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEE-SSCC-SH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEE-CCCC-CH
Confidence 45568999999999999999999987542 22 011 22 123578888888753 4554333 3332 56
Q ss_pred HHHHHHHHcCccccccc
Q 017179 223 GCVREVAKSGLNVFAHN 239 (376)
Q Consensus 223 e~l~~L~~aGld~i~h~ 239 (376)
+.+.+...+|+|.+..+
T Consensus 386 ~DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 386 LDALEKIEAGASVCQLY 402 (443)
T ss_dssp HHHHHHHHTTEEEEEES
T ss_pred HHHHHHHHcCCCEEEEc
Confidence 66666667999988664
No 178
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=54.87 E-value=85 Score=29.41 Aligned_cols=92 Identities=14% Similarity=0.185 Sum_probs=60.9
Q ss_pred CCcEEEEecCCCCC--C----hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEe
Q 017179 207 PNMLIEALVPDFRG--N----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTS 280 (376)
Q Consensus 207 p~i~Ie~l~pd~~g--~----~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~ 280 (376)
.++..-+++|--.+ | ...++.+.++|++.+-.+=-|-+ . ..-+.+++.++++.+.+.... +.-
T Consensus 15 ~Gv~~a~vTPf~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE-----~--~~Ls~eEr~~vi~~~~~~~~g----rvp 83 (306)
T 1o5k_A 15 RGVGTAIVTPFKNGELDLESYERLVRYQLENGVNALIVLGTTGE-----S--PTVNEDEREKLVSRTLEIVDG----KIP 83 (306)
T ss_dssp SEEEEECCCCEETTEECHHHHHHHHHHHHHTTCCEEEESSGGGT-----G--GGCCHHHHHHHHHHHHHHHTT----SSC
T ss_pred CCeeeeeecCcCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccc-----h--hhCCHHHHHHHHHHHHHHhCC----CCe
Confidence 44555556662122 3 44566677888876533211222 1 135788999999999885432 356
Q ss_pred EEEec-CCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 281 IMLGC-GETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 281 imvGl-GET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
+|+|. +.+-+|.++..+...+.|+|.+-+
T Consensus 84 ViaGvg~~st~~ai~la~~A~~~Gadavlv 113 (306)
T 1o5k_A 84 VIVGAGTNSTEKTLKLVKQAEKLGANGVLV 113 (306)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred EEEcCCCccHHHHHHHHHHHHhcCCCEEEE
Confidence 89999 558899999999999999996544
No 179
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=54.74 E-value=36 Score=34.98 Aligned_cols=77 Identities=9% Similarity=0.080 Sum_probs=50.0
Q ss_pred CchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCC-CcEEEE-ecCCCCCChHHHHHHHHcCccc
Q 017179 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEA-LVPDFRGNNGCVREVAKSGLNV 235 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p-~i~Ie~-l~pd~~g~~e~l~~L~~aGld~ 235 (376)
+++.+++.++++.+.|++.|.|-=-..--. ...+.++|+.|++..| ++.|++ ..-++.--......-.++|++.
T Consensus 173 ~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~----P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAveAGa~~ 248 (539)
T 1rqb_A 173 TVEGYVKLAGQLLDMGADSIALKDMAALLK----PQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVDV 248 (539)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTCCCC----HHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCcC----HHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHHHhCCCE
Confidence 789999999999999999988831111111 3568899999998876 666664 2323211122233344789988
Q ss_pred ccc
Q 017179 236 FAH 238 (376)
Q Consensus 236 i~h 238 (376)
+..
T Consensus 249 VD~ 251 (539)
T 1rqb_A 249 VDT 251 (539)
T ss_dssp EEE
T ss_pred EEE
Confidence 744
No 180
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=54.73 E-value=49 Score=29.67 Aligned_cols=98 Identities=15% Similarity=0.218 Sum_probs=57.0
Q ss_pred CCCCCchhHHHHH-HHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEec--CCCCC------ChHH
Q 017179 154 PPPPDPDEPTNVA-EAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALV--PDFRG------NNGC 224 (376)
Q Consensus 154 ~~~l~~eEi~~~a-~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~--pd~~g------~~e~ 224 (376)
|.+-..++.++.| +.+.+.|+++||+-|-... .+..+++ .+ .++.|-+.+ ..|.+ ++|.
T Consensus 23 ~G~eNT~~tl~la~era~e~~Ik~iVVAS~sG~-----TA~k~~e---~~----~~i~lVvVTh~~GF~~pg~~e~~~e~ 90 (201)
T 1vp8_A 23 PGRENTEETLRLAVERAKELGIKHLVVASSYGD-----TAMKALE---MA----EGLEVVVVTYHTGFVREGENTMPPEV 90 (201)
T ss_dssp CSGGGHHHHHHHHHHHHHHHTCCEEEEECSSSH-----HHHHHHH---HC----TTCEEEEEECCTTSSSTTCCSSCHHH
T ss_pred CCcccHHHHHHHHHHHHHHcCCCEEEEEeCCCh-----HHHHHHH---Hh----cCCeEEEEeCcCCCCCCCCCcCCHHH
Confidence 3344556666655 5567789999999875321 1222333 22 345554443 12221 6899
Q ss_pred HHHHHHcCccccc--ccccchH-HHHHhhcCCCCCHHH-HHHHHH
Q 017179 225 VREVAKSGLNVFA--HNIETVE-ELQSAVRDHRANFKQ-SLDVLM 265 (376)
Q Consensus 225 l~~L~~aGld~i~--h~lEtv~-~l~~~vr~r~~t~e~-~L~vl~ 265 (376)
.+.|.+.|..++. |.+..++ .+.++.. +.+.-+ .-++|+
T Consensus 91 ~~~L~~~G~~V~t~tH~lsgveR~is~kfG--G~~p~eiiA~tLR 133 (201)
T 1vp8_A 91 EEELRKRGAKIVRQSHILSGLERSISRKLG--GVSRTEAIAEALR 133 (201)
T ss_dssp HHHHHHTTCEEEECCCTTTTTHHHHHHHTC--CCCHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEEeccccchhHHHHHhcC--CCCHHHHHHHHHH
Confidence 9999999999984 4566777 5555554 344333 334554
No 181
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=54.63 E-value=32 Score=32.05 Aligned_cols=63 Identities=19% Similarity=0.174 Sum_probs=45.9
Q ss_pred HHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 166 AEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 166 a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
++++.+.|+++|.+-. .+.+.+.+.++.++..+|++.|++.- .. +.+.+..+.++|+|.+..+
T Consensus 195 ~~~A~~aGaD~I~ld~--------~~~~~l~~~v~~l~~~~~~~~i~AsG-GI--~~~ni~~~~~aGaD~i~vG 257 (273)
T 2b7n_A 195 AKNAMNAGADIVMCDN--------LSVLETKEIAAYRDAHYPFVLLEASG-NI--SLESINAYAKSGVDAISVG 257 (273)
T ss_dssp HHHHHHHTCSEEEEET--------CCHHHHHHHHHHHHHHCTTCEEEEES-SC--CTTTHHHHHTTTCSEEECT
T ss_pred HHHHHHcCCCEEEECC--------CCHHHHHHHHHHhhccCCCcEEEEEC-CC--CHHHHHHHHHcCCcEEEEc
Confidence 4444467999998743 22566777788887777888888654 33 6788999999999988664
No 182
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=54.60 E-value=1.1e+02 Score=26.66 Aligned_cols=69 Identities=10% Similarity=0.032 Sum_probs=41.0
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
+..+++.+ ++++.+.|++.|++- ..++. ...+.++++.|++..-... ++++. +.++.+.++|+|.+
T Consensus 27 ~~~~~l~~-~~~~~~~G~~~v~lr---~~~~~---~~~~~~~~~~l~~~~~~~~-~l~v~------~~~~~a~~~gad~v 92 (221)
T 1yad_A 27 KPVEELAR-IIITIQNEVDFIHIR---ERSKS---AADILKLLDLIFEGGIDKR-KLVMN------GRVDIALFSTIHRV 92 (221)
T ss_dssp SCHHHHHH-HHHHHGGGCSEEEEC---CTTSC---HHHHHHHHHHHHHTTCCGG-GEEEE------SCHHHHHTTTCCEE
T ss_pred cCcchHHH-HHHHHHCCCCEEEEc---cCCCC---HHHHHHHHHHHHHhcCcCC-eEEEe------ChHHHHHHcCCCEE
Confidence 34455544 667778899987662 12332 5567788888876421111 22222 23577888999987
Q ss_pred ccc
Q 017179 237 AHN 239 (376)
Q Consensus 237 ~h~ 239 (376)
..+
T Consensus 93 ~l~ 95 (221)
T 1yad_A 93 QLP 95 (221)
T ss_dssp EEC
T ss_pred EeC
Confidence 554
No 183
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=54.42 E-value=39 Score=30.09 Aligned_cols=90 Identities=16% Similarity=0.174 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccc
Q 017179 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNI 240 (376)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~l 240 (376)
.+.+.++.+.+.|++.|++|+.+++... .|.+ .+++++|++.. ++.|-+. +... +.+.+..+.++|+|.+-.+
T Consensus 152 ~~~e~~~~~~~~G~~~i~~~~~~~~g~~-~g~~--~~~~~~l~~~~-~ipvia~-GGI~-~~~d~~~~~~~Gadgv~vG- 224 (253)
T 1thf_D 152 LLRDWVVEVEKRGAGEILLTSIDRDGTK-SGYD--TEMIRFVRPLT-TLPIIAS-GGAG-KMEHFLEAFLAGADAALAA- 224 (253)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTSC-SCCC--HHHHHHHGGGC-CSCEEEE-SCCC-SHHHHHHHHHTTCSEEEES-
T ss_pred CHHHHHHHHHHCCCCEEEEEeccCCCCC-CCCC--HHHHHHHHHhc-CCCEEEE-CCCC-CHHHHHHHHHcCChHHHHH-
Confidence 4667778888899999999987764322 2221 46777777654 3444332 2331 5688888889998876543
Q ss_pred cchHHHHHhhcCCCCCHHHHHHHH
Q 017179 241 ETVEELQSAVRDHRANFKQSLDVL 264 (376)
Q Consensus 241 Etv~~l~~~vr~r~~t~e~~L~vl 264 (376)
..++ . ...++++.++.+
T Consensus 225 ---sal~---~-~~~~~~~~~~~l 241 (253)
T 1thf_D 225 ---SVFH---F-REIDVRELKEYL 241 (253)
T ss_dssp ---HHHH---T-TCSCHHHHHHHH
T ss_pred ---HHHH---c-CCCCHHHHHHHH
Confidence 3333 2 233566655554
No 184
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=54.41 E-value=31 Score=32.60 Aligned_cols=63 Identities=19% Similarity=0.212 Sum_probs=46.3
Q ss_pred HHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 166 AEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 166 a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
++++.+.|+++|.|-. .+.+.+.+.++.++..+|++.|++. +.. +.+.+..+.++|+|.+..+
T Consensus 210 ~~~A~~aGaD~I~ld~--------~~~~~l~~~v~~l~~~~~~~~I~AS-GGI--t~~ni~~~~~aGaD~i~vG 272 (299)
T 2jbm_A 210 AVQAAEAGADLVLLDN--------FKPEELHPTATVLKAQFPSVAVEAS-GGI--TLDNLPQFCGPHIDVISMG 272 (299)
T ss_dssp HHHHHHTTCSEEEEES--------CCHHHHHHHHHHHHHHCTTSEEEEE-SSC--CTTTHHHHCCTTCCEEECT
T ss_pred HHHHHHcCCCEEEECC--------CCHHHHHHHHHHhhccCCCeeEEEE-CCC--CHHHHHHHHHCCCCEEEEC
Confidence 4444567999988743 2256677788888777888888865 344 6788999999999988664
No 185
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=54.11 E-value=43 Score=30.90 Aligned_cols=135 Identities=10% Similarity=0.217 Sum_probs=79.1
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCCCCC-cc------cHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHc
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLA-DQ------GSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS 231 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~dl~-d~------g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a 231 (376)
.+|++..|..++ -..|+|.=-.+..+. ++ ..+.+.++|+.+++. +++|.+++- - +.+.++.-++.
T Consensus 76 t~emi~ia~~~k---P~~vtLVPE~r~e~TTegGldv~~~~~~l~~~i~~L~~~--GIrVSLFID-p--d~~qi~aA~~~ 147 (243)
T 1m5w_A 76 TEEMLAIAVETK---PHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADA--GIQVSLFID-A--DEEQIKAAAEV 147 (243)
T ss_dssp SHHHHHHHHHHC---CSEEEECCCCSSCSSCCSCCCSGGGHHHHHHHHHHHHHT--TCEEEEEEC-S--CHHHHHHHHHT
T ss_pred CHHHHHHHHHcC---CCEEEECCCCCCCcCCCcchhHHhhHHHHHHHHHHHHHC--CCEEEEEeC-C--CHHHHHHHHHh
Confidence 457777776553 467877543333331 22 356788899999875 799988762 2 67899999999
Q ss_pred CcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHc-CCcEEEee
Q 017179 232 GLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAA-GVDVMTFG 310 (376)
Q Consensus 232 Gld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel-~vd~v~~~ 310 (376)
|+|++...-...-..+.... +...++...+.-+.|++ .|+.+.+ |+|=+-+.+... ..+ ++.-++||
T Consensus 148 GA~~IELhTG~Ya~a~~~~~-~~~el~~i~~aa~~A~~---lGL~VnA----GHgL~y~Nv~~i----a~ip~i~ElnIG 215 (243)
T 1m5w_A 148 GAPFIEIHTGCYADAKTDAE-QAQELARIAKAATFAAS---LGLKVNA----GHGLTYHNVKAI----AAIPEMHELNIG 215 (243)
T ss_dssp TCSEEEEECHHHHHCCSHHH-HHHHHHHHHHHHHHHHH---TTCEEEE----ESSCCTTTHHHH----HTCTTEEEEEEC
T ss_pred CcCEEEEechhhhcCCCchh-HHHHHHHHHHHHHHHHH---cCCEEec----CCCCCHHHHHHH----hhCCCCeEEccC
Confidence 99987554221111111000 11234555566666666 4776665 677666555332 233 35677777
Q ss_pred cCC
Q 017179 311 QYM 313 (376)
Q Consensus 311 qY~ 313 (376)
.++
T Consensus 216 Hai 218 (243)
T 1m5w_A 216 HAI 218 (243)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 186
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=53.67 E-value=42 Score=33.80 Aligned_cols=76 Identities=12% Similarity=0.097 Sum_probs=48.1
Q ss_pred CchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEE-ecCCCCCChHHHHHHHHcCcccc
Q 017179 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA-LVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~-l~pd~~g~~e~l~~L~~aGld~i 236 (376)
+++.+++.++++.+.|++.|.|-=-..--. ...+.++|+.|++.. ++.|++ ..-++.--......-.++|++.+
T Consensus 156 ~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~----P~~v~~lv~~l~~~~-~~~i~~H~Hnd~GlAvAN~laAv~AGa~~V 230 (464)
T 2nx9_A 156 NLQTWVDVAQQLAELGVDSIALKDMAGILT----PYAAEELVSTLKKQV-DVELHLHCHSTAGLADMTLLKAIEAGVDRV 230 (464)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTSCCC----HHHHHHHHHHHHHHC-CSCEEEEECCTTSCHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCCCcC----HHHHHHHHHHHHHhc-CCeEEEEECCCCChHHHHHHHHHHhCCCEE
Confidence 689999999999999999998831111111 356889999999876 455554 22222111222333447899887
Q ss_pred cc
Q 017179 237 AH 238 (376)
Q Consensus 237 ~h 238 (376)
..
T Consensus 231 D~ 232 (464)
T 2nx9_A 231 DT 232 (464)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 187
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=53.63 E-value=1.6e+02 Score=29.05 Aligned_cols=130 Identities=21% Similarity=0.323 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccc
Q 017179 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNI 240 (376)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~l 240 (376)
...+.++.+.+.|++.+++.+... + ...+.+.++.|++..|.+.+- .+.. .+.+....+.++|+|.+..+.
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a~g-~-----~~~~~~~i~~l~~~~p~~pvi--~G~v-~t~~~a~~~~~~Gad~I~vg~ 303 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTAHG-H-----SAGVLRKIAEIRAHFPNRTLI--AGNI-ATAEGARALYDAGVDVVKVGI 303 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCSCT-T-----CHHHHHHHHHHHHHCSSSCEE--EEEE-CSHHHHHHHHHTTCSEEEECS
T ss_pred hHHHHHHHHHHcCCCeEEEeeecC-c-----chhHHHHHHHHHHHCCCCcEe--CCCc-cCHHHHHHHHHcCCCEEEECc
Confidence 346678888889999999876321 1 335678899999887655442 2222 257888899999999885442
Q ss_pred -----cchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEE-ecCCCHHHHHHHHHHHHHcCCcEEEeecCC
Q 017179 241 -----ETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIML-GCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (376)
Q Consensus 241 -----Etv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imv-GlGET~ee~~e~L~~Lrel~vd~v~~~qY~ 313 (376)
-+. +.+.-+. ..+.+...++...+.+. +++ +|. |=--+.+|+.+.+ .+|.+.+-+|..+
T Consensus 304 g~g~~~~t-r~~~~~~--~p~~~~l~~~~~~~~~~---~ip----via~GGi~~~~di~kal----~~GA~~v~vG~~~ 368 (491)
T 1zfj_A 304 GPGSICTT-RVVAGVG--VPQVTAIYDAAAVAREY---GKT----IIADGGIKYSGDIVKAL----AAGGNAVMLGSMF 368 (491)
T ss_dssp SCCTTBCH-HHHTCCC--CCHHHHHHHHHHHHHHT---TCE----EEEESCCCSHHHHHHHH----HTTCSEEEESTTT
T ss_pred cCCcceEE-eeecCCC--CCcHHHHHHHHHHHhhc---CCC----EEeeCCCCCHHHHHHHH----HcCCcceeeCHHh
Confidence 222 2222111 22344444444444432 233 233 2236888888776 3699999887654
No 188
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=53.57 E-value=61 Score=33.18 Aligned_cols=90 Identities=11% Similarity=0.123 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHH-cCccccccc
Q 017179 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK-SGLNVFAHN 239 (376)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~-aGld~i~h~ 239 (376)
...+.++.+.+.|+.+|++|+.+++.... |.+ .+++++|++.. .+.|-+ .++.. +.+.+..+.+ .|++.+-.+
T Consensus 453 ~~~e~a~~~~~~Ga~~il~t~~~~dG~~~-G~d--~~li~~l~~~~-~iPVIa-sGGi~-s~~d~~~~~~~~G~~gvivg 526 (555)
T 1jvn_A 453 GVWELTRACEALGAGEILLNCIDKDGSNS-GYD--LELIEHVKDAV-KIPVIA-SSGAG-VPEHFEEAFLKTRADACLGA 526 (555)
T ss_dssp EHHHHHHHHHHTTCCEEEECCGGGTTTCS-CCC--HHHHHHHHHHC-SSCEEE-CSCCC-SHHHHHHHHHHSCCSEEEES
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCCCCCCC-CCC--HHHHHHHHHhC-CccEEE-ECCCC-CHHHHHHHHHhcCChHHHHH
Confidence 46678899999999999999988765532 332 56778887754 244422 23332 6788888877 787754332
Q ss_pred ccchHHHHHhhcCCCCCHHHHHHHH
Q 017179 240 IETVEELQSAVRDHRANFKQSLDVL 264 (376)
Q Consensus 240 lEtv~~l~~~vr~r~~t~e~~L~vl 264 (376)
..+ .. ...++.+..+.+
T Consensus 527 ----~a~---~~-~~~~~~e~~~~l 543 (555)
T 1jvn_A 527 ----GMF---HR-GEFTVNDVKEYL 543 (555)
T ss_dssp ----HHH---HT-TSCCHHHHHHHH
T ss_pred ----HHH---Hc-CCCCHHHHHHHH
Confidence 222 22 456777766654
No 189
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=53.54 E-value=33 Score=30.39 Aligned_cols=73 Identities=16% Similarity=0.162 Sum_probs=48.2
Q ss_pred hHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHc---Cccccc
Q 017179 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS---GLNVFA 237 (376)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a---Gld~i~ 237 (376)
++.+.++.+.+.|+..|.+|+.+++.... |. -.++++++++.. ++.|-+. +... +.+.+..+.++ |+|.+-
T Consensus 150 ~~~e~~~~~~~~G~~~i~~~~~~~~~~~~-g~--~~~~~~~l~~~~-~ipvia~-GGI~-~~~d~~~~~~~~~~Gad~v~ 223 (244)
T 2y88_A 150 DLWDVLERLDSEGCSRFVVTDITKDGTLG-GP--NLDLLAGVADRT-DAPVIAS-GGVS-SLDDLRAIATLTHRGVEGAI 223 (244)
T ss_dssp EHHHHHHHHHHTTCCCEEEEETTTTTTTS-CC--CHHHHHHHHTTC-SSCEEEE-SCCC-SHHHHHHHHTTGGGTEEEEE
T ss_pred CHHHHHHHHHhCCCCEEEEEecCCccccC-CC--CHHHHHHHHHhC-CCCEEEE-CCCC-CHHHHHHHHhhccCCCCEEE
Confidence 66778888889999999999987653321 22 145677776643 3444433 3331 56888889888 888765
Q ss_pred cc
Q 017179 238 HN 239 (376)
Q Consensus 238 h~ 239 (376)
.+
T Consensus 224 vG 225 (244)
T 2y88_A 224 VG 225 (244)
T ss_dssp EC
T ss_pred Ec
Confidence 43
No 190
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=53.32 E-value=36 Score=33.21 Aligned_cols=96 Identities=11% Similarity=0.168 Sum_probs=61.7
Q ss_pred CCcEEEEecCCC-CC--C----hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEE
Q 017179 207 PNMLIEALVPDF-RG--N----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKT 279 (376)
Q Consensus 207 p~i~Ie~l~pd~-~g--~----~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt 279 (376)
.++..-+++|-- .+ + ...++.+.++|++.+-.+=-|-+- ..-+.+++.++++.+.+.... +.
T Consensus 61 ~Gi~~alvTPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~-------~~Ls~eEr~~vi~~~ve~~~g----rv 129 (360)
T 4dpp_A 61 LRVITAIKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEG-------QLMSWDEHIMLIGHTVNCFGG----SI 129 (360)
T ss_dssp CCEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT----TS
T ss_pred CCeEEEEeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccCh-------hhCCHHHHHHHHHHHHHHhCC----CC
Confidence 356666666621 11 3 445666778888765332122221 134678999999988886432 34
Q ss_pred eEEEecC-CCHHHHHHHHHHHHHcCCcEEEe-ecCC
Q 017179 280 SIMLGCG-ETPDQVVSTMEKVRAAGVDVMTF-GQYM 313 (376)
Q Consensus 280 ~imvGlG-ET~ee~~e~L~~Lrel~vd~v~~-~qY~ 313 (376)
-+|+|.| .+-+|.++..+...+.|+|.+-+ .+|+
T Consensus 130 pViaGvg~~st~eai~la~~A~~~Gadavlvv~PyY 165 (360)
T 4dpp_A 130 KVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYY 165 (360)
T ss_dssp EEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred eEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 5889995 68999999999999999986544 3443
No 191
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=53.11 E-value=71 Score=29.85 Aligned_cols=125 Identities=14% Similarity=0.169 Sum_probs=71.7
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCC---cEEEE-ecCCCCC-ChHHHHHHHHc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPN---MLIEA-LVPDFRG-NNGCVREVAKS 231 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~---i~Ie~-l~pd~~g-~~e~l~~L~~a 231 (376)
.+++.+.+.++++.+.|++.|.|---..--. ...+.++++.+++..|+ +.|++ +.-++.- ....+. -.++
T Consensus 147 ~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~----P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~la-A~~a 221 (293)
T 3ewb_X 147 SDRAFLIEAVQTAIDAGATVINIPDTVGYTN----PTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALA-AIEN 221 (293)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECSSSCCC----HHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHH-HHHT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCCCC----HHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHH-HHHh
Confidence 5788899999999999999988742111111 45688999999998885 45654 2323311 122333 3468
Q ss_pred CcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHH
Q 017179 232 GLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRA 301 (376)
Q Consensus 232 Gld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lre 301 (376)
|++.+...+-..=+ +......++.+..|+.-... .| +.|++ ..+.+.++-+++.+
T Consensus 222 Ga~~vd~sv~GlGe-----raGN~~~E~vv~~L~~~~~~--~g--~~tgi------dl~~L~~~s~~v~~ 276 (293)
T 3ewb_X 222 GARRVEGTINGIGE-----RAGNTALEEVAVALHIRKDF--YQ--AETNI------VLNQFKNSSDLISR 276 (293)
T ss_dssp TCCEEEEBGGGCCT-----TTCBCBHHHHHHHHHHTHHH--HC--EEECC------CGGGHHHHHHHHHH
T ss_pred CCCEEEeecccccc-----ccccHhHHHHHHHHHhhhhh--cC--CCCCC------CHHHHHHHHHHHHH
Confidence 99877553322111 12345566666666542221 13 33433 45556666655554
No 192
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=53.05 E-value=53 Score=30.55 Aligned_cols=83 Identities=13% Similarity=0.143 Sum_probs=55.0
Q ss_pred HHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHHH
Q 017179 223 GCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVRA 301 (376)
Q Consensus 223 e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lre 301 (376)
..++.+.++|++.+-.+=-|-+ . ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+...+
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE-----~--~~Ls~~Er~~v~~~~~~~~~g----r~pvi~Gvg~~~t~~ai~la~~a~~ 94 (291)
T 3a5f_A 26 ELIEWHIKSKTDAIIVCGTTGE-----A--TTMTETERKETIKFVIDKVNK----RIPVIAGTGSNNTAASIAMSKWAES 94 (291)
T ss_dssp HHHHHHHHTTCCEEEESSGGGT-----G--GGSCHHHHHHHHHHHHHHHTT----SSCEEEECCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECccccC-----h--hhCCHHHHHHHHHHHHHHhCC----CCcEEEeCCcccHHHHHHHHHHHHh
Confidence 4456667778776532211222 1 135688999999998885432 34589999 4588999999999999
Q ss_pred cCCcEEEe-ecCC-CCC
Q 017179 302 AGVDVMTF-GQYM-RPS 316 (376)
Q Consensus 302 l~vd~v~~-~qY~-~P~ 316 (376)
.|+|.+-+ .+|+ .|+
T Consensus 95 ~Gadavlv~~P~y~~~s 111 (291)
T 3a5f_A 95 IGVDGLLVITPYYNKTT 111 (291)
T ss_dssp TTCSEEEEECCCSSCCC
T ss_pred cCCCEEEEcCCCCCCCC
Confidence 99985433 4444 453
No 193
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=52.55 E-value=1.4e+02 Score=27.32 Aligned_cols=167 Identities=14% Similarity=0.114 Sum_probs=97.8
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCC------hHHHHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN------NGCVREVAK 230 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~------~e~l~~L~~ 230 (376)
.+.++|.+.++++.+.|+.-|++... +....+...+ ..++.|...++.-.|. ....+...+
T Consensus 40 ~t~~~i~~lc~eA~~~~~~aVcV~p~------------~v~~a~~~L~-~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~ 106 (239)
T 3ngj_A 40 ATEEQIRKLCSEAAEYKFASVCVNPT------------WVPLCAELLK-GTGVKVCTVIGFPLGATPSEVKAYETKVAVE 106 (239)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECGG------------GHHHHHHHHT-TSSCEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCcEEEECHH------------HHHHHHHHhC-CCCCeEEEEeccCCCCCchHHHHHHHHHHHH
Confidence 56789999999999999999987421 2333333222 2357777766433342 223344455
Q ss_pred cCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 231 SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 231 aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
.|+|-+..-+.. ..+. ..+|+.+++-|+.+++..+. ..+|.=+=.|+ -|++++....+...+.|.|+|-..
T Consensus 107 ~GAdEIDmViNi-----g~lk--~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~-Lt~eei~~a~~ia~~aGADfVKTS 177 (239)
T 3ngj_A 107 QGAEEVDMVINI-----GMVK--AKKYDDVEKDVKAVVDASGK-ALTKVIIECCY-LTNEEKVEVCKRCVAAGAEYVKTS 177 (239)
T ss_dssp TTCSEEEEECCH-----HHHH--TTCHHHHHHHHHHHHHHHTT-SEEEEECCGGG-SCHHHHHHHHHHHHHHTCSEEECC
T ss_pred cCCCEEEEEeeh-----HHhc--cccHHHHHHHHHHHHHHhcC-CceEEEEecCC-CCHHHHHHHHHHHHHHCcCEEECC
Confidence 677765432211 1222 35678888888887776543 44444111132 389999999999999999999875
Q ss_pred cCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhccchhHhhh
Q 017179 311 QYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASGPMVRSS 355 (376)
Q Consensus 311 qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sgp~vrss 355 (376)
.-+.+. + .+++..+.+++.. .-.....+|| =+|+.
T Consensus 178 TGf~~g--g------At~~dv~lmr~~v-g~~v~VKasG-GIrt~ 212 (239)
T 3ngj_A 178 TGFGTH--G------ATPEDVKLMKDTV-GDKALVKAAG-GIRTF 212 (239)
T ss_dssp CSSSSC--C------CCHHHHHHHHHHH-GGGSEEEEES-SCCSH
T ss_pred CCCCCC--C------CCHHHHHHHHHhh-CCCceEEEeC-CCCCH
Confidence 322221 1 2455666666553 1123345777 46654
No 194
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=52.54 E-value=16 Score=33.15 Aligned_cols=96 Identities=16% Similarity=0.198 Sum_probs=57.0
Q ss_pred CchhHHHHHHHHHHCC-CcEEEEEeeeCCCCCccc-HHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccc
Q 017179 158 DPDEPTNVAEAIASWG-LDYVVITSVDRDDLADQG-SGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNV 235 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G-~~eIvLTsg~r~dl~d~g-~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~ 235 (376)
.|..+.+.++.+...| +++|.+-+++.. ..... ...-.+-|+++++..+++.|++ .+.. +.+.+..+.++|+|+
T Consensus 122 np~tp~~~~~~~l~~g~~D~VlvmsV~pG-f~gq~f~~~~l~ki~~lr~~~~~~~I~V-dGGI--~~~ti~~~~~aGAd~ 197 (227)
T 1tqx_A 122 KPKTDVQKLVPILDTNLINTVLVMTVEPG-FGGQSFMHDMMGKVSFLRKKYKNLNIQV-DGGL--NIETTEISASHGANI 197 (227)
T ss_dssp CTTSCGGGGHHHHTTTCCSEEEEESSCTT-CSSCCCCGGGHHHHHHHHHHCTTCEEEE-ESSC--CHHHHHHHHHHTCCE
T ss_pred CCCCcHHHHHHHhhcCCcCEEEEeeeccC-CCCcccchHHHHHHHHHHHhccCCeEEE-ECCC--CHHHHHHHHHcCCCE
Confidence 3444455556666776 899988887632 21100 1123556777777665666653 3334 688999999999998
Q ss_pred ccccccchHHHHHhhcCCCCCHHHHHHHHHH
Q 017179 236 FAHNIETVEELQSAVRDHRANFKQSLDVLMM 266 (376)
Q Consensus 236 i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ 266 (376)
+--+ ..+|. ..++++.++.++.
T Consensus 198 ~V~G----saIf~-----~~d~~~~i~~l~~ 219 (227)
T 1tqx_A 198 IVAG----TSIFN-----AEDPKYVIDTMRV 219 (227)
T ss_dssp EEES----HHHHT-----CSSHHHHHHHHHH
T ss_pred EEEe----HHHhC-----CCCHHHHHHHHHH
Confidence 7543 34442 2245555555544
No 195
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=52.44 E-value=24 Score=32.25 Aligned_cols=126 Identities=13% Similarity=0.215 Sum_probs=80.4
Q ss_pred cEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHh-CC--------CCce--E
Q 017179 209 MLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDY-VP--------AGTL--T 277 (376)
Q Consensus 209 i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~-~p--------~Gi~--t 277 (376)
..+-+..|+...+.+.++.+.++|.|.+-.++ . .+.+.+..+++++.+++. .| +.+. +
T Consensus 10 ~~it~gDP~~~~t~~~~~~l~~~GaD~IelG~----------S-~g~t~~~~~~~v~~ir~~~~Pivl~~y~~n~i~~gv 78 (234)
T 2f6u_A 10 RHITKLDPDRTNTDEIIKAVADSGTDAVMISG----------T-QNVTYEKARTLIEKVSQYGLPIVVEPSDPSNVVYDV 78 (234)
T ss_dssp CEEEEECTTSCCCHHHHHHHHTTTCSEEEECC----------C-TTCCHHHHHHHHHHHTTSCCCEEECCSSCCCCCCCS
T ss_pred eEEEeeCCCccccHHHHHHHHHcCCCEEEECC----------C-CCCCHHHHHHHHHHhcCCCCCEEEecCCcchhhcCC
Confidence 35566778776678899999999999988876 1 467888899999999872 12 1110 1
Q ss_pred EEeEEEec-CCCHHHHH-----HHHHHH----HHcC-----CcEEEeecC-CCCCC------CCCCCcccCChHHHHHHH
Q 017179 278 KTSIMLGC-GETPDQVV-----STMEKV----RAAG-----VDVMTFGQY-MRPSK------RHMPVSEYITPEAFERYR 335 (376)
Q Consensus 278 kt~imvGl-GET~ee~~-----e~L~~L----rel~-----vd~v~~~qY-~~P~~------~~~~v~~~v~pe~~~~l~ 335 (376)
..-|+.=+ -|..+++. +.+..+ ++.+ ++.++.+-- +.|+. .+.+. .+|++...|.
T Consensus 79 Dg~iipdLp~ee~~~~~~g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~~P~~~~~rl~~g~~~---~~~e~~~~~a 155 (234)
T 2f6u_A 79 DYLFVPTVLNSADGDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTKALCN---IDKELAASYA 155 (234)
T ss_dssp SEEEEEEETTBSBGGGTTHHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTSHHHHHTTBCCC---CCHHHHHHHH
T ss_pred CEEEEcccCCCCCHHHHhhhHHHHHHhhhhhHHHcCCcccceeeeecceEEECCCCceEEeecCCCC---CCHHHHHHHH
Confidence 22244445 56666776 555333 7777 888886322 35531 11111 2578888888
Q ss_pred HHHHHH---hhhhhcc
Q 017179 336 ALGMEM---GFRYVAS 348 (376)
Q Consensus 336 ~~a~~~---gf~~~~s 348 (376)
+.+.++ ||-|..+
T Consensus 156 ~~g~~~l~~~~Vyl~~ 171 (234)
T 2f6u_A 156 LVGEKLFNLPIIYIEY 171 (234)
T ss_dssp HHHHHTTCCSEEEEEC
T ss_pred HhhhhhcCCCEEEEeC
Confidence 888754 7777654
No 196
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=52.34 E-value=74 Score=24.40 Aligned_cols=58 Identities=7% Similarity=0.071 Sum_probs=37.4
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHH
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD 269 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~ 269 (376)
.++++.|++..|.+.|-+++... +.+......++|++.| +. +..+.++.++.|+.+.+
T Consensus 67 ~~~~~~l~~~~~~~~ii~~s~~~--~~~~~~~~~~~g~~~~-------------l~-kP~~~~~l~~~i~~~~~ 124 (137)
T 3hdg_A 67 LEMLDRIKAGGAKPYVIVISAFS--EMKYFIKAIELGVHLF-------------LP-KPIEPGRLMETLEDFRH 124 (137)
T ss_dssp HHHHHHHHHTTCCCEEEECCCCC--CHHHHHHHHHHCCSEE-------------CC-SSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEecCc--ChHHHHHHHhCCccee-------------Ec-CCCCHHHHHHHHHHHHH
Confidence 46777888777877776666654 5666777778887654 22 33555666666665554
No 197
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=51.83 E-value=1.7e+02 Score=28.12 Aligned_cols=117 Identities=15% Similarity=0.210 Sum_probs=70.8
Q ss_pred HHHHHHHHCC-CcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccc
Q 017179 164 NVAEAIASWG-LDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIET 242 (376)
Q Consensus 164 ~~a~al~~~G-~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEt 242 (376)
+.|.++++.| +.-+. + ++. .+...+.|+++++. +.+.+.+.++-. ..+.++.+.++|+|.+..+..
T Consensus 60 ~lA~avA~~GGlgii~-----~-~~s---~e~~~~~I~~vk~~-~~~pvga~ig~~--~~e~a~~l~eaGad~I~ld~a- 126 (361)
T 3khj_A 60 LMAVGMARLGGIGIIH-----K-NMD---MESQVNEVLKVKNS-GGLRVGAAIGVN--EIERAKLLVEAGVDVIVLDSA- 126 (361)
T ss_dssp HHHHHHHHTTCEEEEC-----S-SSC---HHHHHHHHHHHHHT-TCCCCEEEECTT--CHHHHHHHHHTTCSEEEECCS-
T ss_pred HHHHHHHHcCCCeEEe-----c-CCC---HHHHHHHHHHHHhc-cCceEEEEeCCC--HHHHHHHHHHcCcCeEEEeCC-
Confidence 5666666654 44332 1 222 55677888888764 333333333211 268899999999998754311
Q ss_pred hHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecCCCCC
Q 017179 243 VEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYMRPS 316 (376)
Q Consensus 243 v~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY~~P~ 316 (376)
....+.+++.++.+++.. +++ +++|-.-|.++ .+.+.+.++|.|.++ ..|+
T Consensus 127 -----------~G~~~~~~~~i~~i~~~~--~~~----Vivg~v~t~e~----A~~l~~aGaD~I~VG--~~~G 177 (361)
T 3khj_A 127 -----------HGHSLNIIRTLKEIKSKM--NID----VIVGNVVTEEA----TKELIENGADGIKVG--IGPG 177 (361)
T ss_dssp -----------CCSBHHHHHHHHHHHHHC--CCE----EEEEEECSHHH----HHHHHHTTCSEEEEC--SSCC
T ss_pred -----------CCCcHHHHHHHHHHHHhc--CCc----EEEccCCCHHH----HHHHHHcCcCEEEEe--cCCC
Confidence 112356778888888854 233 34444467665 456678999999886 4454
No 198
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=51.77 E-value=38 Score=31.83 Aligned_cols=65 Identities=12% Similarity=0.215 Sum_probs=46.4
Q ss_pred HHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 164 ~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
+.++++.+.|.+.|.|= ... .+.+.+.++.++..+|++.|++.- .. +.+.+..+.+.|+|.+..+
T Consensus 205 eea~eal~aGaD~I~LD-----n~~---~~~~~~~v~~l~~~~~~v~ieaSG-GI--t~~~i~~~a~tGVD~isvG 269 (284)
T 1qpo_A 205 EQLDAVLPEKPELILLD-----NFA---VWQTQTAVQRRDSRAPTVMLESSG-GL--SLQTAATYAETGVDYLAVG 269 (284)
T ss_dssp HHHHHHGGGCCSEEEEE-----TCC---HHHHHHHHHHHHHHCTTCEEEEES-SC--CTTTHHHHHHTTCSEEECG
T ss_pred HHHHHHHHcCCCEEEEC-----CCC---HHHHHHHHHHhhccCCCeEEEEEC-CC--CHHHHHHHHhcCCCEEEEC
Confidence 55566667888877652 122 456778888888767778887654 33 6788999999999998654
No 199
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=51.61 E-value=24 Score=32.11 Aligned_cols=75 Identities=11% Similarity=0.077 Sum_probs=50.9
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccc
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h 238 (376)
..+|++.|+...+.|++++++.=-+.. . .|.....++++.|.+.. .+.+.+=-+ .+ +.+.++.+.++|++.+-.
T Consensus 30 ~~dP~~~a~~~~~~gad~lhvvDld~a--~-~~~~~~~~~i~~i~~~~-~~pl~vGGG-Ir-s~e~~~~~l~~GadkVii 103 (243)
T 4gj1_A 30 KYNPLKKFKEYEKAGAKELHLVDLTGA--K-DPSKRQFALIEKLAKEV-SVNLQVGGG-IR-SKEEVKALLDCGVKRVVI 103 (243)
T ss_dssp CCCHHHHHHHHHHHTCCEEEEEEHHHH--H-CGGGCCHHHHHHHHHHC-CSEEEEESS-CC-CHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHHHHHHHCCCCEEEEEecCcc--c-ccchhHHHHHHHHHHhc-CCCeEeccc-cc-cHHHHHHHHHcCCCEEEE
Confidence 356889999999999999998733210 0 12223457888887754 355543222 22 688999999999998877
Q ss_pred c
Q 017179 239 N 239 (376)
Q Consensus 239 ~ 239 (376)
|
T Consensus 104 ~ 104 (243)
T 4gj1_A 104 G 104 (243)
T ss_dssp C
T ss_pred c
Confidence 6
No 200
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=51.34 E-value=56 Score=32.30 Aligned_cols=147 Identities=16% Similarity=0.178 Sum_probs=78.9
Q ss_pred CCCCchhHHHHHHH-------HHHCCCcEEEEEeee--------------CCCCCccc-H-----HHHHHHHHHHHhhC-
Q 017179 155 PPPDPDEPTNVAEA-------IASWGLDYVVITSVD--------------RDDLADQG-S-----GHFAQTVRKLKELK- 206 (376)
Q Consensus 155 ~~l~~eEi~~~a~a-------l~~~G~~eIvLTsg~--------------r~dl~d~g-~-----~~~~elvr~Ik~~~- 206 (376)
..|+.+||.++++. +.+.|++-|-|-+++ |.|-. || . ....++|++|++..
T Consensus 158 r~mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~y-GGs~lenR~Rf~~evv~aVr~~v~ 236 (419)
T 3l5a_A 158 IAMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHY-GADSLKNRARLCLEVMRAVQEVID 236 (419)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTT-STTCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCC-CCchhhhhhHHHHHHHHHHHHHHh
Confidence 35899998876543 457899999998884 22221 23 2 45788999988754
Q ss_pred ----CC--cEEEEecCCCC----C-C----hHHHHHHHH-cCcccccccccchHH-HHHhhcCCCCCHHHHHHHHHHHHH
Q 017179 207 ----PN--MLIEALVPDFR----G-N----NGCVREVAK-SGLNVFAHNIETVEE-LQSAVRDHRANFKQSLDVLMMAKD 269 (376)
Q Consensus 207 ----p~--i~Ie~l~pd~~----g-~----~e~l~~L~~-aGld~i~h~lEtv~~-l~~~vr~r~~t~e~~L~vl~~ak~ 269 (376)
++ +.+++..-++. | + .+.++.|.+ +|+|.+....=+.+. .+.. .+.+..+ ....++.+++
T Consensus 237 ~~~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~-~~~g~~~--~~~~a~~Ik~ 313 (419)
T 3l5a_A 237 KEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTS-RTPGDHF--GRPVNQIVYE 313 (419)
T ss_dssp HHCCTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBC-CCSSTTT--TSBHHHHHHH
T ss_pred hhcCCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCcccccccc-CCCCccc--cHHHHHHHHH
Confidence 23 33443322221 1 1 346778888 999987653211110 0110 1011111 1234445555
Q ss_pred hCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecCC
Q 017179 270 YVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (376)
Q Consensus 270 ~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY~ 313 (376)
..+..+++ |.+|--.|.++..+.|+. +|.|.++..+
T Consensus 314 ~v~~~iPV---I~~GgI~t~e~Ae~~L~~-----aDlVaiGR~~ 349 (419)
T 3l5a_A 314 HLAGRIPL---IASGGINSPESALDALQH-----ADMVGMSSPF 349 (419)
T ss_dssp HHTTSSCE---EECSSCCSHHHHHHHGGG-----CSEEEESTHH
T ss_pred HcCCCCeE---EEECCCCCHHHHHHHHHh-----CCcHHHHHHH
Confidence 32211332 222333688887776654 8999998654
No 201
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=50.64 E-value=21 Score=31.90 Aligned_cols=73 Identities=14% Similarity=0.138 Sum_probs=45.1
Q ss_pred hHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHc---Cccccc
Q 017179 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS---GLNVFA 237 (376)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a---Gld~i~ 237 (376)
.+.+.++.+.+.|++.|++|+++++.-. .|. -.+++++|++.. ++.|-+. +... +.+.+..+.++ |+|.+-
T Consensus 147 ~~~e~~~~~~~~G~~~i~~~~~~~~~~~-~g~--~~~~~~~i~~~~-~ipvia~-GGI~-~~~d~~~~~~~~~~Gadgv~ 220 (244)
T 1vzw_A 147 DLYETLDRLNKEGCARYVVTDIAKDGTL-QGP--NLELLKNVCAAT-DRPVVAS-GGVS-SLDDLRAIAGLVPAGVEGAI 220 (244)
T ss_dssp BHHHHHHHHHHTTCCCEEEEEC--------CC--CHHHHHHHHHTC-SSCEEEE-SCCC-SHHHHHHHHTTGGGTEEEEE
T ss_pred CHHHHHHHHHhCCCCEEEEeccCccccc-CCC--CHHHHHHHHHhc-CCCEEEE-CCCC-CHHHHHHHHhhccCCCceee
Confidence 5566777788899999999998764321 121 246777777654 3444433 3331 56888999988 988765
Q ss_pred cc
Q 017179 238 HN 239 (376)
Q Consensus 238 h~ 239 (376)
.+
T Consensus 221 vG 222 (244)
T 1vzw_A 221 VG 222 (244)
T ss_dssp EC
T ss_pred ee
Confidence 53
No 202
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=50.62 E-value=20 Score=34.47 Aligned_cols=54 Identities=17% Similarity=0.309 Sum_probs=42.3
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCc-cc------HHHHHHHHHHHHhhCCCcEEE
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLAD-QG------SGHFAQTVRKLKELKPNMLIE 212 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d-~g------~~~~~elvr~Ik~~~p~i~Ie 212 (376)
++.+.+.+.++.+.++|++-|.|=|+.. ..| .| -.-+...|+.||+.+|++.|-
T Consensus 61 ~sid~l~~~~~~~~~lGi~~v~LFgvp~--~Kd~~gs~A~~~~g~v~rair~iK~~~p~l~vi 121 (328)
T 1w1z_A 61 FTIDRAVEECKELYDLGIQGIDLFGIPE--QKTEDGSEAYNDNGILQQAIRAIKKAVPELCIM 121 (328)
T ss_dssp EEHHHHHHHHHHHHHHTCCEEEEEECCS--SCCSSCGGGGCTTSHHHHHHHHHHHHSTTSEEE
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEECCCC--CCCccccccCCCCChHHHHHHHHHHHCCCeEEE
Confidence 7889999999999999999999999831 122 11 124778999999999997663
No 203
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=50.61 E-value=1.7e+02 Score=27.62 Aligned_cols=168 Identities=10% Similarity=0.101 Sum_probs=101.1
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCC------hHHHHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN------NGCVREVAK 230 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~------~e~l~~L~~ 230 (376)
.+.++|.+.++++.+.|+.-|++... +...++...+. .++.|...++.-.|. ....+...+
T Consensus 71 ~T~~dI~~lc~eA~~~g~aaVCV~P~------------~V~~a~~~L~~-s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~ 137 (288)
T 3oa3_A 71 ATGSQIDVLCAEAKEYGFATVCVRPD------------YVSRAVQYLQG-TQVGVTCVIGFHEGTYSTDQKVSEAKRAMQ 137 (288)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECGG------------GHHHHHHHTTT-SSCEEEEEESTTTSCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCcEEEECHH------------HHHHHHHHcCC-CCCeEEEEeCCCCCCCcHHHHHHHHHHHHH
Confidence 56889999999999999999987421 23333322221 247777666532331 223455667
Q ss_pred cCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 231 SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 231 aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
.|+|-+..-+. +..+. ..+|+..++-|+.+++..+. ..+|.=+..|+ -|++++....+...+.|.|+|.-.
T Consensus 138 ~GAdEIDmVIN-----ig~lk--~g~~~~v~~eI~~V~~a~~~-~~lKVIlEt~~-Lt~eei~~A~~ia~eaGADfVKTS 208 (288)
T 3oa3_A 138 NGASELDMVMN-----YPWLS--EKRYTDVFQDIRAVRLAAKD-AILKVILETSQ-LTADEIIAGCVLSSLAGADYVKTS 208 (288)
T ss_dssp TTCSEEEEECC-----HHHHH--TTCHHHHHHHHHHHHHHTTT-SEEEEECCGGG-CCHHHHHHHHHHHHHTTCSEEECC
T ss_pred cCCCEEEEEee-----hhhhc--CCcHHHHHHHHHHHHHHhcC-CCceEEEECCC-CCHHHHHHHHHHHHHcCCCEEEcC
Confidence 78877653221 11222 35688888888888887543 22333333332 378999999999999999999775
Q ss_pred cCCCCCCCCCCCcccCChHHHHHHHHHHHHHh--hhhhccchhHhhh
Q 017179 311 QYMRPSKRHMPVSEYITPEAFERYRALGMEMG--FRYVASGPMVRSS 355 (376)
Q Consensus 311 qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~g--f~~~~sgp~vrss 355 (376)
.-+.+ .-.+++..+.++++....| ....+|| =+|+.
T Consensus 209 TGf~~--------~GAT~edv~lmr~~v~~~g~~v~VKAAG-GIrt~ 246 (288)
T 3oa3_A 209 TGFNG--------PGASIENVSLMSAVCDSLQSETRVKASG-GIRTI 246 (288)
T ss_dssp CSSSS--------CCCCHHHHHHHHHHHHHSSSCCEEEEES-SCCSH
T ss_pred CCCCC--------CCCCHHHHHHHHHHHHHhCCCceEEEeC-CCCCH
Confidence 21222 1235667777777654322 3445777 46654
No 204
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=50.00 E-value=94 Score=29.83 Aligned_cols=171 Identities=15% Similarity=0.160 Sum_probs=97.0
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.+.+.+..+++++.+.+.--|+-++...-.+ .|...+..+++...+.++.+.|- +.-|+-.+.+.+....++|-.
T Consensus 26 ~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y--~g~~~~~~~v~~aa~~~~~VPVa-lHlDHg~~~e~i~~ai~~GFt-- 100 (323)
T 2isw_A 26 NNMEQIQGIMKAVVQLKSPVILQCSRGALKY--SDMIYLKKLCEAALEKHPDIPIC-IHLDHGDTLESVKMAIDLGFS-- 100 (323)
T ss_dssp CSHHHHHHHHHHHHHTTCCEEEEEEHHHHHH--TTTHHHHHHHHHHHHHCTTSCEE-EEEEEECSHHHHHHHHHTTCS--
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECChhHHHh--CCHHHHHHHHHHHHHhcCCCcEE-EECCCCCCHHHHHHHHHcCCC--
Confidence 3467788888888888886665554421111 23456777887777764455543 344554467888888898854
Q ss_pred cccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--C-CCH-------HHHHHHHHHHHHcCCcE
Q 017179 237 AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--G-ETP-------DQVVSTMEKVRAAGVDV 306 (376)
Q Consensus 237 ~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl--G-ET~-------ee~~e~L~~Lrel~vd~ 306 (376)
.+++|.+..=| ..+.+..-++++.||. .|+.+-. =+|. | |+. -+-.+..+++++.++|.
T Consensus 101 SVMiDgS~~p~------eENi~~Tk~vv~~ah~---~gvsVEa--ELG~vgg~Ed~v~~~~~yTdPeea~~Fv~~TgvD~ 169 (323)
T 2isw_A 101 SVMIDASHHPF------DENVRITKEVVAYAHA---RSVSVEA--ELGTLGGIEEDVQNTVQLTEPQDAKKFVELTGVDA 169 (323)
T ss_dssp EEEECCTTSCH------HHHHHHHHHHHHHHHT---TTCEEEE--EESCC----------CCCCCHHHHHHHHHHHCCSE
T ss_pred eEEecCCCCCH------HHHHHHHHHHHHHHHH---cCCeEEE--EeCCccCCccCcccccccCCHHHHHHHHHHHCCCE
Confidence 34566553111 1234556678888888 4655433 2244 2 211 23457788899999998
Q ss_pred EEeecCCCCCCCCCCCc--ccCC-hHHHHHHHHHHHHHhhhhhc
Q 017179 307 MTFGQYMRPSKRHMPVS--EYIT-PEAFERYRALGMEMGFRYVA 347 (376)
Q Consensus 307 v~~~qY~~P~~~~~~v~--~~v~-pe~~~~l~~~a~~~gf~~~~ 347 (376)
+-+. + +.-|-.-. ..++ -=.|++|+++....++..|.
T Consensus 170 LAva--i--Gt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~vpLVl 209 (323)
T 2isw_A 170 LAVA--I--GTSHGAYKFKSESDIRLAIDRVKTISDLTGIPLVM 209 (323)
T ss_dssp EEEC--S--SCCSSSBCCCC----CCCCHHHHHHHHHHCSCEEE
T ss_pred EEEe--c--CccccccCCCCCcccccCHHHHHHHHHHhCCCeEE
Confidence 7663 1 12222111 1100 01366777777777776554
No 205
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=49.48 E-value=1.2e+02 Score=28.21 Aligned_cols=138 Identities=14% Similarity=0.128 Sum_probs=77.9
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEee-eCCCCCcc----cHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHH
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSV-DRDDLADQ----GSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK 230 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg-~r~dl~d~----g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~ 230 (376)
..++++.++.++++.+.|.+-|=|=|. .||.-..- ..+.+..+|+.|++ +++.|.+ -.+ ..+..+.-.+
T Consensus 26 ~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~--~~v~iSI--DT~--~~~Va~~al~ 99 (270)
T 4hb7_A 26 FNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVG--FDVKISV--DTF--RSEVAEACLK 99 (270)
T ss_dssp -CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTT--SSSEEEE--ECS--CHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhc--CCCeEEE--ECC--CHHHHHHHHH
Confidence 367889999999999999998877333 25543221 23456666777754 4555543 223 5677777778
Q ss_pred cCcccccc--cccchHHHHHh----------hcC---CCCC--H----HHHHHHHHHHHHhCCCCce---EEEeEEEecC
Q 017179 231 SGLNVFAH--NIETVEELQSA----------VRD---HRAN--F----KQSLDVLMMAKDYVPAGTL---TKTSIMLGCG 286 (376)
Q Consensus 231 aGld~i~h--~lEtv~~l~~~----------vr~---r~~t--~----e~~L~vl~~ak~~~p~Gi~---tkt~imvGlG 286 (376)
+|++.+|- +....+++++- |+. +++. + +...+.++.+.+ .|+. +--+-=+|||
T Consensus 100 aGa~iINDVs~g~~d~~m~~~va~~~~~~vlMH~~~~p~~~~vv~ev~~~l~~~i~~a~~---aGI~~~~IilDPGiGFg 176 (270)
T 4hb7_A 100 LGVDMINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGNRDEPVVEEMLTSLLAQAHQAKI---AGIPSNKIWLDPGIGFA 176 (270)
T ss_dssp HTCCEEEETTTTSSCTHHHHHHHHTTCEEEEECCCSSCCSSCHHHHHHHHHHHHHHHHHH---TTCCGGGEEEECCTTSS
T ss_pred hccceeccccccccchhHHHHHHHcCCCeEEeccccCCccccchhHHHHHHHHHHHHHHH---cCCCCceEEEeCCCCcc
Confidence 88887763 11111233322 110 1111 1 222334455555 4542 2223234889
Q ss_pred CCHHHHHHHHHHHHHc
Q 017179 287 ETPDQVVSTMEKVRAA 302 (376)
Q Consensus 287 ET~ee~~e~L~~Lrel 302 (376)
-|.++=++.|+.|.++
T Consensus 177 Kt~~~N~~ll~~l~~~ 192 (270)
T 4hb7_A 177 KTRNEEAEVMARLDEL 192 (270)
T ss_dssp CCHHHHHHHHTCHHHH
T ss_pred cccccHHHHHhhHHHH
Confidence 9999877777666554
No 206
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=49.40 E-value=52 Score=29.55 Aligned_cols=73 Identities=18% Similarity=0.159 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
.+.+.++.+.+.|+..|.+|+..++... .|.+ .++++.+++.. ++.|-+.-+-. +.+.+..+.++|+|.+-.+
T Consensus 157 ~~~e~~~~~~~~G~~~i~~t~~~~~g~~-~g~~--~~~i~~l~~~~-~ipvia~GGI~--~~ed~~~~~~~Gadgv~vg 229 (266)
T 2w6r_A 157 LLRDWVVEVEKRGAGEILLTSIDRDGTK-SGYD--TEMIRFVRPLT-TLPIIASGGAG--KMEHFLEAFLAGADAALAA 229 (266)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTTC-SCCC--HHHHHHHGGGC-CSCEEEESCCC--SHHHHHHHHHHTCSEEEES
T ss_pred hHHHHHHHHHHcCCCEEEEEeecCCCCc-CCCC--HHHHHHHHHHc-CCCEEEeCCCC--CHHHHHHHHHcCCHHHHcc
Confidence 4566677788899999999987664322 1221 46777787754 34443332222 5678888888998876543
No 207
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=49.29 E-value=1.5e+02 Score=26.69 Aligned_cols=70 Identities=19% Similarity=0.288 Sum_probs=42.3
Q ss_pred HHHHHHHHCCCcEEEEEeeeCCC---C--------CcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcC
Q 017179 164 NVAEAIASWGLDYVVITSVDRDD---L--------ADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG 232 (376)
Q Consensus 164 ~~a~al~~~G~~eIvLTsg~r~d---l--------~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG 232 (376)
.+++.++..|+.++.|.=.|.-+ + .|-|......+.+.|++.+|.+.|+.....+ +.+.+..+.+ +
T Consensus 42 ~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~--~~~~~~~~~~-~ 118 (251)
T 1zud_1 42 PAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL--TGEALKDAVA-R 118 (251)
T ss_dssp HHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC--CHHHHHHHHH-H
T ss_pred HHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC--CHHHHHHHHh-c
Confidence 56888999999988776332111 1 1123334455667778889999998776555 4455554443 2
Q ss_pred cccc
Q 017179 233 LNVF 236 (376)
Q Consensus 233 ld~i 236 (376)
.|++
T Consensus 119 ~DvV 122 (251)
T 1zud_1 119 ADVV 122 (251)
T ss_dssp CSEE
T ss_pred CCEE
Confidence 4443
No 208
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=48.95 E-value=49 Score=33.03 Aligned_cols=123 Identities=20% Similarity=0.282 Sum_probs=57.5
Q ss_pred HHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhC------CCcEEEEecCCCCCChHHHHHHHHcCccccc
Q 017179 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK------PNMLIEALVPDFRGNNGCVREVAKSGLNVFA 237 (376)
Q Consensus 164 ~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~------p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~ 237 (376)
+.++.+.+.++..+.++--+. .+ .|.-...++++.+.... +.+.+..-.+......+.+..+.++|+|.+.
T Consensus 178 ea~~~m~~~~~~~lpVVd~~g-~l--vGiIt~~Dll~~~~~~~~~~D~~~~l~vga~ig~~~~~~~~a~~l~~aGvd~v~ 254 (494)
T 1vrd_A 178 KAKEILHQHRIEKLPLVSKDN-KL--VGLITIKDIMSVIEHPNAARDEKGRLLVGAAVGTSPETMERVEKLVKAGVDVIV 254 (494)
T ss_dssp ----------------------------------CHHHHTCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHcCCcEEEEEcCCC-eE--EEEEEHHHHHhhhccccccccchhhhccccccCcCHhHHHHHHHHHHhCCCEEE
Confidence 344455667777766653211 11 23444555666664321 1233322222221136788899999999875
Q ss_pred ccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 238 HNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 238 h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
.+.- ...+...++.++.+++..|. +++ ++|-+-|.++. +.+.+.|+|.|.++
T Consensus 255 i~~~------------~G~~~~~~e~i~~i~~~~p~-~pv----i~g~~~t~e~a----~~l~~~G~d~I~v~ 306 (494)
T 1vrd_A 255 IDTA------------HGHSRRVIETLEMIKADYPD-LPV----VAGNVATPEGT----EALIKAGADAVKVG 306 (494)
T ss_dssp ECCS------------CCSSHHHHHHHHHHHHHCTT-SCE----EEEEECSHHHH----HHHHHTTCSEEEEC
T ss_pred EEec------------CCchHHHHHHHHHHHHHCCC-ceE----EeCCcCCHHHH----HHHHHcCCCEEEEc
Confidence 5311 11346778999999998763 554 45777787776 56668999999885
No 209
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=48.60 E-value=1.8e+02 Score=28.43 Aligned_cols=55 Identities=13% Similarity=0.135 Sum_probs=28.5
Q ss_pred CCHHHHHHH----HHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHc--CCcEEEeecC
Q 017179 255 ANFKQSLDV----LMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAA--GVDVMTFGQY 312 (376)
Q Consensus 255 ~t~e~~L~v----l~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel--~vd~v~~~qY 312 (376)
.++++..++ ++.+|+..|. .+|-.++ -.|+..+.+.--++.|... .+|+|.+.-|
T Consensus 174 ~~~~~la~ll~ag~~aVR~v~p~-~~V~ih~--~~~~~~~~~~~~~d~l~~~g~d~DvIG~syY 234 (399)
T 1ur4_A 174 TDWAKMSQLFNAGSQAVRETDSN-ILVALHF--TNPETSGRYAWIAETLHRHHVDYDVFASSYY 234 (399)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCTT-SEEEEEE--CCTTSTTHHHHHHHHHHHTTCCCSEEEEEEC
T ss_pred ccHHHHHHHHHHHHHHHHHhCCC-CeEEEEe--CCCcchHHHHHHHHHHHHcCCCcCeEeEecC
Confidence 445554444 4666777665 5443332 2244433433334445544 4689999644
No 210
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=48.12 E-value=35 Score=29.45 Aligned_cols=112 Identities=21% Similarity=0.244 Sum_probs=68.8
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCC-CcEEEEecCCCCCChHHHHHHHHcCccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSGLNV 235 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aGld~ 235 (376)
.++++..+.++.+.+.|++-|-++... ++ ..+.++.+++.+| +..|.+-+- . +.+.++...++|+|.
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~~~----~~-----~~~~i~~ir~~~~~~~~ig~~~v-~--~~~~~~~a~~~Gad~ 86 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITFTV----PD-----ADTVIKELSFLKEKGAIIGAGTV-T--SVEQCRKAVESGAEF 86 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEETTS----TT-----HHHHHHHTHHHHHTTCEEEEESC-C--SHHHHHHHHHHTCSE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC----hh-----HHHHHHHHHHHCCCCcEEEeccc-C--CHHHHHHHHHcCCCE
Confidence 578899999999999999988776431 21 2456777777655 566654221 1 567788888999998
Q ss_pred ccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 236 FAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 236 i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
+ .+ +... -++++.+++. |+.+-. |. -|.+|+. ...+.|+|.+.+.
T Consensus 87 i-v~-------------~~~~----~~~~~~~~~~---g~~vi~----g~-~t~~e~~----~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 87 I-VS-------------PHLD----EEISQFCKEK---GVFYMP----GV-MTPTELV----KAMKLGHTILKLF 131 (205)
T ss_dssp E-EC-------------SSCC----HHHHHHHHHH---TCEEEC----EE-CSHHHHH----HHHHTTCCEEEET
T ss_pred E-Ec-------------CCCC----HHHHHHHHHc---CCcEEC----Cc-CCHHHHH----HHHHcCCCEEEEc
Confidence 7 32 1111 1355555653 455433 33 2555533 3456777777664
No 211
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=47.93 E-value=78 Score=29.40 Aligned_cols=77 Identities=17% Similarity=0.219 Sum_probs=52.0
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVR 300 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lr 300 (376)
...++.+.++|++.+-.+=-|-+- ..-+.+++.++++.+.+.... +.-+|+|. +.+-+|.++..+...
T Consensus 25 ~~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g----r~pviaGvg~~~t~~ai~la~~a~ 93 (292)
T 2ojp_A 25 KKLIDYHVASGTSAIVSVGTTGES-------ATLNHDEHADVVMMTLDLADG----RIPVIAGTGANATAEAISLTQRFN 93 (292)
T ss_dssp HHHHHHHHHHTCCEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT----SSCEEEECCCSSHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEECccccch-------hhCCHHHHHHHHHHHHHHhCC----CCcEEEecCCccHHHHHHHHHHHH
Confidence 345566677787765322112221 135678899999998875432 34589999 458899999999999
Q ss_pred HcCCcEEEe
Q 017179 301 AAGVDVMTF 309 (376)
Q Consensus 301 el~vd~v~~ 309 (376)
+.|+|.+-+
T Consensus 94 ~~Gadavlv 102 (292)
T 2ojp_A 94 DSGIVGCLT 102 (292)
T ss_dssp TSSCSEEEE
T ss_pred hcCCCEEEE
Confidence 999986544
No 212
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=47.80 E-value=38 Score=32.29 Aligned_cols=125 Identities=18% Similarity=0.217 Sum_probs=71.2
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCC---cEEEE-ecCCCCC-ChHHHHHHHHc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPN---MLIEA-LVPDFRG-NNGCVREVAKS 231 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~---i~Ie~-l~pd~~g-~~e~l~~L~~a 231 (376)
.+++.+.+.++++.+.|++.|.|---..--. ...+.++|+.+++..|+ +.|++ ..-++.- ....+. -.++
T Consensus 148 ~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~----P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~la-A~~a 222 (325)
T 3eeg_A 148 ADQAFLARMVEAVIEAGADVVNIPDTTGYML----PWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLA-ALQN 222 (325)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEECCBSSSCCC----HHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHH-HHHH
T ss_pred chHHHHHHHHHHHHhcCCCEEEecCccCCcC----HHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHH-HHHh
Confidence 5788899999999999999887631111111 45688999999998886 66765 2223311 122333 3467
Q ss_pred CcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHH
Q 017179 232 GLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRA 301 (376)
Q Consensus 232 Gld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lre 301 (376)
|++.+...+-..=+ +......++.+..|+..... .| +.|++ ..+.+.+.-+++.+
T Consensus 223 Ga~~vd~tv~GlGe-----r~GN~~lE~vv~~L~~~~~~--~g--~~tgi------dl~~L~~~s~~v~~ 277 (325)
T 3eeg_A 223 GARQVECTINGIGE-----RAGNTALEEVVMAMECHKET--LG--LETGI------NHKKLVPISHLVST 277 (325)
T ss_dssp TCCEEEEBGGGCCS-----TTCCCBHHHHHHHHHHTHHH--HC--EECCC------CGGGHHHHHHHHHH
T ss_pred CCCEEEEecccccc-----cccchhHHHHHHHHHhhhhc--cC--CCCCc------CHHHHHHHHHHHHH
Confidence 88877553322111 11345677777666653321 12 33332 44555555555554
No 213
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=47.79 E-value=1.4e+02 Score=28.45 Aligned_cols=136 Identities=18% Similarity=0.151 Sum_probs=80.9
Q ss_pred CchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccc
Q 017179 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFA 237 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~ 237 (376)
+.|.+..+++++.+.+.--|+-++...-.+ .|...+..+++...+.++.+.|- |.-|+-.+.+.+..-.++|-. .
T Consensus 26 n~e~~~avi~AAee~~sPvIlq~s~g~~~y--~g~~~~~~~v~~aa~~~~~VPVa-lHLDHg~~~e~~~~ai~~GFt--S 100 (307)
T 3n9r_A 26 NFEMLNAIFEAGNEENSPLFIQASEGAIKY--MGIDMAVGMVKIMCERYPHIPVA-LHLDHGTTFESCEKAVKAGFT--S 100 (307)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEEEHHHHHH--HCHHHHHHHHHHHHHHSTTSCEE-EEEEEECSHHHHHHHHHHTCS--E
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcChhhhhh--CCHHHHHHHHHHHHHhcCCCcEE-EECCCCCCHHHHHHHHHhCCC--c
Confidence 467777788888888876555444321111 23566777787776654445443 333444466778888888844 4
Q ss_pred ccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--CCCH-----------HHHHHHHHHHHHcCC
Q 017179 238 HNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--GETP-----------DQVVSTMEKVRAAGV 304 (376)
Q Consensus 238 h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl--GET~-----------ee~~e~L~~Lrel~v 304 (376)
+++|.+..=| ..+.+..-++++.|+. .|+.+-. =+|. |+.+ -+-.+..+|+++.++
T Consensus 101 VMiDgS~~p~------eeNi~~Tk~vv~~ah~---~gvsVEa--ELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~Tgv 169 (307)
T 3n9r_A 101 VMIDASHHAF------EENLELTSKVVKMAHN---AGVSVEA--ELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQV 169 (307)
T ss_dssp EEECCTTSCH------HHHHHHHHHHHHHHHH---TTCEEEE--EESCCCCC----------CCSCCHHHHHHHHHHHCC
T ss_pred EEEECCCCCH------HHHHHHHHHHHHHHHH---cCCeEEE--EeeeeccccCCcccccccccCCCHHHHHHHHHHHCC
Confidence 4566544111 1234556688889988 3665543 2354 3221 134677788889999
Q ss_pred cEEEe
Q 017179 305 DVMTF 309 (376)
Q Consensus 305 d~v~~ 309 (376)
|.+-+
T Consensus 170 D~LAv 174 (307)
T 3n9r_A 170 DYLAP 174 (307)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 98766
No 214
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=47.64 E-value=49 Score=28.96 Aligned_cols=74 Identities=18% Similarity=0.207 Sum_probs=46.5
Q ss_pred hhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
.++.+.++.+.++|+++|.+++.+.+.... |. -.+.++.+++.. ++.|-+. +... +.+.+..+.++|+|.+-.+
T Consensus 154 ~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~-~~--~~~~i~~l~~~~-~~pvia~-GGi~-~~~~~~~~~~~Ga~~v~vg 227 (253)
T 1h5y_A 154 LDAVKWAKEVEELGAGEILLTSIDRDGTGL-GY--DVELIRRVADSV-RIPVIAS-GGAG-RVEHFYEAAAAGADAVLAA 227 (253)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTTTTCS-CC--CHHHHHHHHHHC-SSCEEEE-SCCC-SHHHHHHHHHTTCSEEEES
T ss_pred CCHHHHHHHHHhCCCCEEEEecccCCCCcC-cC--CHHHHHHHHHhc-CCCEEEe-CCCC-CHHHHHHHHHcCCcHHHHH
Confidence 456677888889999999999876533211 11 135566666653 3444333 2221 4577888888998877553
No 215
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=47.57 E-value=60 Score=29.53 Aligned_cols=77 Identities=19% Similarity=0.153 Sum_probs=47.5
Q ss_pred HHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHH
Q 017179 168 AIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQ 247 (376)
Q Consensus 168 al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~ 247 (376)
..++.|..+|-.=-|.-+|..+.|...+.++.+.++.....+ +++...|+ +...+.....+|+|.+... +.++
T Consensus 120 ~Aa~AGa~yISPfvgRi~d~g~dG~~~v~~i~~~~~~~~~~T--~IlaAS~R-n~~~v~~aa~~G~d~~Tip----~~vl 192 (223)
T 3s1x_A 120 LAAKAGVTYVSPFVGRLDDIGEDGMQIIDMIRTIFNNYIIKT--QILVASIR-NPIHVLRSAVIGADVVTVP----FNVL 192 (223)
T ss_dssp HHHHTTCSEEEEBSHHHHHTTSCTHHHHHHHHHHHHHTTCCS--EEEEBSCC-SHHHHHHHHHHTCSEEEEC----HHHH
T ss_pred HHHHcCCeEEEeecchHhhcCCCHHHHHHHHHHHHHHcCCCC--EEEEEeCC-CHHHHHHHHHcCCCEEEeC----HHHH
Confidence 345678888755333334454456665666666666543334 45667776 6777777778999987553 3666
Q ss_pred Hhhc
Q 017179 248 SAVR 251 (376)
Q Consensus 248 ~~vr 251 (376)
+.+-
T Consensus 193 ~~l~ 196 (223)
T 3s1x_A 193 KSLM 196 (223)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 6654
No 216
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=47.29 E-value=44 Score=30.20 Aligned_cols=151 Identities=17% Similarity=0.178 Sum_probs=85.0
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeC---CCCCcccHHHHHHHHHHHHhhC-CCcEEEEecCCCCCChHHHHHHHHcC
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDR---DDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRGNNGCVREVAKSG 232 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r---~dl~d~g~~~~~elvr~Ik~~~-p~i~Ie~l~pd~~g~~e~l~~L~~aG 232 (376)
.|.-.+.+.++.+ +.|++.+++---|. +.+. .| ..+++.|++.. -.+.+++.+-+- ...++.+.++|
T Consensus 10 ~D~~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~t-~G----~~~v~~lr~~~~~~~dvhLmv~dp---~~~i~~~~~aG 80 (231)
T 3ctl_A 10 MDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLT-LS----PFFVSQVKKLATKPLDCHLMVTRP---QDYIAQLARAG 80 (231)
T ss_dssp SCGGGHHHHHHHH-HTTCSCEEEEEECSSSSSCCC-BC----HHHHHHHHTTCCSCEEEEEESSCG---GGTHHHHHHHT
T ss_pred CChhhHHHHHHHH-HcCCCEEEEEEEeCccCccch-hc----HHHHHHHHhccCCcEEEEEEecCH---HHHHHHHHHcC
Confidence 5777788888888 99999877654443 2232 23 35788888753 124555555431 33578999999
Q ss_pred cccccccccc-hHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeec
Q 017179 233 LNVFAHNIET-VEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQ 311 (376)
Q Consensus 233 ld~i~h~lEt-v~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~q 311 (376)
+|.+....|+ .+ + ..++++.+++ .| .+.++.+.-+ |..+.++.+. + ++|+|.+..
T Consensus 81 Ad~itvh~Ea~~~-----------~---~~~~i~~i~~---~G--~k~gv~lnp~-tp~~~~~~~l---~-~~D~Vlvms 136 (231)
T 3ctl_A 81 ADFITLHPETING-----------Q---AFRLIDEIRR---HD--MKVGLILNPE-TPVEAMKYYI---H-KADKITVMT 136 (231)
T ss_dssp CSEEEECGGGCTT-----------T---HHHHHHHHHH---TT--CEEEEEECTT-CCGGGGTTTG---G-GCSEEEEES
T ss_pred CCEEEECcccCCc-----------c---HHHHHHHHHH---cC--CeEEEEEECC-CcHHHHHHHH---h-cCCEEEEee
Confidence 9999876665 22 1 1255666666 35 3556655444 4433333221 1 577776521
Q ss_pred CCCCCCCCCCCcccCChHHHHHHHHHHHHHh
Q 017179 312 YMRPSKRHMPVSEYITPEAFERYRALGMEMG 342 (376)
Q Consensus 312 Y~~P~~~~~~v~~~v~pe~~~~l~~~a~~~g 342 (376)
..|+..+-+... -..++.++++++..+.|
T Consensus 137 -V~pGfggQ~f~~-~~l~kI~~lr~~~~~~~ 165 (231)
T 3ctl_A 137 -VDPGFAGQPFIP-EMLDKLAELKAWREREG 165 (231)
T ss_dssp -SCTTCSSCCCCT-THHHHHHHHHHHHHHHT
T ss_pred -eccCcCCccccH-HHHHHHHHHHHHHhccC
Confidence 246433222111 12345666666655443
No 217
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=47.15 E-value=59 Score=31.39 Aligned_cols=75 Identities=19% Similarity=0.208 Sum_probs=51.5
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcC-ccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG-LNV 235 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG-ld~ 235 (376)
.+.++..+.++.+.+.|+.+|.++++....-++.. .+.++.|++... +.|- ..+.+ +.+....+.++| +|.
T Consensus 247 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~----~~~~~~i~~~~~-iPvi-~~Ggi--~~~~a~~~l~~g~aD~ 318 (365)
T 2gou_A 247 DPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTP----VSFKRALREAYQ-GVLI-YAGRY--NAEKAEQAINDGLADM 318 (365)
T ss_dssp SHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCC----HHHHHHHHHHCC-SEEE-EESSC--CHHHHHHHHHTTSCSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCcc----HHHHHHHHHHCC-CcEE-EeCCC--CHHHHHHHHHCCCcce
Confidence 45678889999999999999999987432111111 256777777663 4332 34556 677788888887 898
Q ss_pred cccc
Q 017179 236 FAHN 239 (376)
Q Consensus 236 i~h~ 239 (376)
+..+
T Consensus 319 V~ig 322 (365)
T 2gou_A 319 IGFG 322 (365)
T ss_dssp EECC
T ss_pred ehhc
Confidence 8775
No 218
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=46.46 E-value=81 Score=27.28 Aligned_cols=78 Identities=19% Similarity=0.211 Sum_probs=49.5
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCC--CCCcccHHHHHHHHHHHHhhCC-CcEEEEecCCCCCChHHHHHHHHcCc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRD--DLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSGL 233 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~--dl~d~g~~~~~elvr~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aGl 233 (376)
+|+.+..+.++.+.+.|++.+.+---+.. .....| .+.+++|++..+ .+.+...+-|. ++.++.+.++|+
T Consensus 13 ~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g----~~~i~~i~~~~~~~~~v~l~v~d~---~~~i~~~~~~ga 85 (220)
T 2fli_A 13 ADYANFASELARIEETDAEYVHIDIMDGQFVPNISFG----ADVVASMRKHSKLVFDCHLMVVDP---ERYVEAFAQAGA 85 (220)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBC----HHHHHHHHTTCCSEEEEEEESSSG---GGGHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeecCCCCCccccC----HHHHHHHHHhCCCCEEEEEeecCH---HHHHHHHHHcCC
Confidence 67888889999999999998766543321 111112 467888887642 13444443321 335789999999
Q ss_pred cccccccc
Q 017179 234 NVFAHNIE 241 (376)
Q Consensus 234 d~i~h~lE 241 (376)
|.+....+
T Consensus 86 d~v~vh~~ 93 (220)
T 2fli_A 86 DIMTIHTE 93 (220)
T ss_dssp SEEEEEGG
T ss_pred CEEEEccC
Confidence 98866433
No 219
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=45.96 E-value=63 Score=30.14 Aligned_cols=68 Identities=21% Similarity=0.260 Sum_probs=49.9
Q ss_pred EeEEEec--CCCHHHHHHHHHHHHHcCCcEEEeecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhcc
Q 017179 279 TSIMLGC--GETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVAS 348 (376)
Q Consensus 279 t~imvGl--GET~ee~~e~L~~Lrel~vd~v~~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~s 348 (376)
.-+|.|. .|+.+...+..+.+++.+.+.+-+ |++.|........ -.-.+.++.+++++.+.|..++.+
T Consensus 39 ~~vIAgpc~~~~~e~a~~~a~~~k~~ga~~~k~-~~~kprts~~~f~-g~g~~gl~~l~~~~~~~Gl~~~te 108 (276)
T 1vs1_A 39 KAVIAGPCSVESWEQVREAALAVKEAGAHMLRG-GAFKPRTSPYSFQ-GLGLEGLKLLRRAGDEAGLPVVTE 108 (276)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHHTCSEEEC-BSSCCCSSTTSCC-CCTHHHHHHHHHHHHHHTCCEEEE
T ss_pred eEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEe-EEEeCCCChhhhc-CCCHHHHHHHHHHHHHcCCcEEEe
Confidence 4577777 899999999999999999999877 6666622111111 123678999999999999877543
No 220
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=45.89 E-value=18 Score=33.15 Aligned_cols=79 Identities=10% Similarity=0.067 Sum_probs=53.1
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCc--ccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLAD--QGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLN 234 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d--~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld 234 (376)
.|...+.+.++.+.+.|++.+++---|+.-.|. .| ...+++|++..+. .+++.+-+ ....++.+.++|+|
T Consensus 23 ~D~~~l~~~i~~~~~~gad~lhvDvmDG~fvpn~t~G----~~~v~~lr~~~~~-DvhLMv~~---p~~~i~~~~~aGAd 94 (237)
T 3cu2_A 23 ANWLQLNEEVTTLLENQINVLHFDIADGQFSSLFTVG----AIGIKYFPTHCFK-DVHLMVRN---QLEVAKAVVANGAN 94 (237)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBC----THHHHTSCTTSEE-EEEEECSC---HHHHHHHHHHTTCS
T ss_pred CCcccHHHHHHHHHHcCCCEEEEEEecCccccchhhh----HHHHHHHhhhCCC-CeEEEEEC---HHHHHHHHHHcCCC
Confidence 577788888899999999988765444322221 23 2677888776553 55554432 24568999999999
Q ss_pred cccccccch
Q 017179 235 VFAHNIETV 243 (376)
Q Consensus 235 ~i~h~lEtv 243 (376)
.+....|..
T Consensus 95 ~itvH~ea~ 103 (237)
T 3cu2_A 95 LVTLQLEQY 103 (237)
T ss_dssp EEEEETTCT
T ss_pred EEEEecCCc
Confidence 987766653
No 221
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=45.75 E-value=1e+02 Score=23.76 Aligned_cols=39 Identities=18% Similarity=0.234 Sum_probs=28.1
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++.|++..|.+.|-+++... +.+......++|++.|
T Consensus 65 ~~~~~~l~~~~~~~~ii~ls~~~--~~~~~~~~~~~g~~~~ 103 (143)
T 3jte_A 65 MDILREIKKITPHMAVIILTGHG--DLDNAILAMKEGAFEY 103 (143)
T ss_dssp HHHHHHHHHHCTTCEEEEEECTT--CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhCCCCeEEEEECCC--CHHHHHHHHHhCccee
Confidence 46777788778888877777654 5666777778887654
No 222
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=45.35 E-value=1.5e+02 Score=25.98 Aligned_cols=120 Identities=10% Similarity=0.071 Sum_probs=73.6
Q ss_pred CcEEEEecCCCCC--ChHHHHHHHHcCcccccccccchH-HHHH-hhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEE
Q 017179 208 NMLIEALVPDFRG--NNGCVREVAKSGLNVFAHNIETVE-ELQS-AVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIML 283 (376)
Q Consensus 208 ~i~Ie~l~pd~~g--~~e~l~~L~~aGld~i~h~lEtv~-~l~~-~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imv 283 (376)
.+.+.+.+-.+.. -.+.++.++++|.+.+........ .-+. ..-+...+.++.-++-+.+++ .|+.+.+. -.
T Consensus 9 ~mklg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~gl~i~~~-~~ 84 (262)
T 3p6l_A 9 GWRLGMQSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAAS---KGIKIVGT-GV 84 (262)
T ss_dssp TEEEEEEGGGGTTSCHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHH---TTCEEEEE-EE
T ss_pred CcEEEEEecccCCCCHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHH---cCCeEEEE-ec
Confidence 4666665433321 367889999999887765432110 0000 000123445555555555566 47765433 33
Q ss_pred ecCCCHHHHHHHHHHHHHcCCcEEEeecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhh
Q 017179 284 GCGETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYV 346 (376)
Q Consensus 284 GlGET~ee~~e~L~~Lrel~vd~v~~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~ 346 (376)
....+.+++.+.++...++|+..|.+. |+ .+.++.+.++|.+.|....
T Consensus 85 ~~~~~~~~~~~~i~~A~~lGa~~v~~~----~~-----------~~~~~~l~~~a~~~gv~l~ 132 (262)
T 3p6l_A 85 YVAEKSSDWEKMFKFAKAMDLEFITCE----PA-----------LSDWDLVEKLSKQYNIKIS 132 (262)
T ss_dssp ECCSSTTHHHHHHHHHHHTTCSEEEEC----CC-----------GGGHHHHHHHHHHHTCEEE
T ss_pred cCCccHHHHHHHHHHHHHcCCCEEEec----CC-----------HHHHHHHHHHHHHhCCEEE
Confidence 456788899999999999999999884 32 2467788888888887543
No 223
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=45.33 E-value=52 Score=29.43 Aligned_cols=74 Identities=15% Similarity=0.135 Sum_probs=45.6
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhC-CCcEEEEecCCCCCChHHHHHHHHcCccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRGNNGCVREVAKSGLNV 235 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~-p~i~Ie~l~pd~~g~~e~l~~L~~aGld~ 235 (376)
++.+++.+.++.+.+.|++.|....|- ..+|+ -.+.++.+++.. +.+.|-+.-+-. +.+.+..+.++|+|.
T Consensus 129 l~~~~~~~~a~~a~eaGad~I~tstg~----~~gga--~~~~i~~v~~~v~~~ipVia~GGI~--t~~da~~~l~aGA~~ 200 (225)
T 1mzh_A 129 LNEEEIKKAVEICIEAGADFIKTSTGF----APRGT--TLEEVRLIKSSAKGRIKVKASGGIR--DLETAISMIEAGADR 200 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCCSC----SSSCC--CHHHHHHHHHHHTTSSEEEEESSCC--SHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECCCC----CCCCC--CHHHHHHHHHHhCCCCcEEEECCCC--CHHHHHHHHHhCchH
Confidence 677889999999999999999443331 11222 134455555443 346665443333 566666677799996
Q ss_pred ccc
Q 017179 236 FAH 238 (376)
Q Consensus 236 i~h 238 (376)
+..
T Consensus 201 iG~ 203 (225)
T 1mzh_A 201 IGT 203 (225)
T ss_dssp EEE
T ss_pred HHH
Confidence 543
No 224
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=45.32 E-value=83 Score=30.52 Aligned_cols=100 Identities=16% Similarity=0.173 Sum_probs=60.8
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCC---cEEEE-ecCCCC-CChHHHHHHHHc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPN---MLIEA-LVPDFR-GNNGCVREVAKS 231 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~---i~Ie~-l~pd~~-g~~e~l~~L~~a 231 (376)
.+++.+.+.++++.+.|++.|.|-=-..--. ...+.++|+.+++..|+ +.|++ ..-|+. +....+.. .++
T Consensus 154 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~----P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laA-v~a 228 (370)
T 3rmj_A 154 SEIDFLAEICGAVIEAGATTINIPDTVGYSI----PYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAA-LKG 228 (370)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEEECSSSCCC----HHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHH-HHT
T ss_pred cCHHHHHHHHHHHHHcCCCEEEecCccCCcC----HHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHH-HHh
Confidence 6789999999999999999988741111111 45688999999998886 66664 333331 11223333 368
Q ss_pred CcccccccccchHHHHHhhcCCCCCHHHHHHHHHH
Q 017179 232 GLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMM 266 (376)
Q Consensus 232 Gld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ 266 (376)
|++.+...+-..=+ +......++.+-.|+.
T Consensus 229 Ga~~vd~tv~GlGe-----raGN~~lE~vv~~L~~ 258 (370)
T 3rmj_A 229 GARQVECTVNGLGE-----RAGNASVEEIVMALKV 258 (370)
T ss_dssp TCCEEEEBGGGCSS-----TTCBCBHHHHHHHHHH
T ss_pred CCCEEEEeccccCc-----ccccccHHHHHHHHHh
Confidence 98877553321111 1134566766666543
No 225
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=45.07 E-value=76 Score=30.74 Aligned_cols=81 Identities=16% Similarity=0.236 Sum_probs=53.1
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeee--CCCC-------Cccc---H---HHHHHHHHHHHhhCC-CcEEEEecCCCCC
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVD--RDDL-------ADQG---S---GHFAQTVRKLKELKP-NMLIEALVPDFRG 220 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~--r~dl-------~d~g---~---~~~~elvr~Ik~~~p-~i~Ie~l~pd~~g 220 (376)
++.+++.+.|+.+.+.|++.|++++.. +.+. ..+| . ..-.++|+.|++..+ ++.|-..- ...
T Consensus 231 ~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~G-GI~- 308 (367)
T 3zwt_A 231 LTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVG-GVS- 308 (367)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEES-SCC-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEEC-CCC-
Confidence 556689999999999999999998654 2211 0122 1 224578889988764 45554333 332
Q ss_pred ChHHHHHHHHcCccccccc
Q 017179 221 NNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 221 ~~e~l~~L~~aGld~i~h~ 239 (376)
+.+.+.++..+|+|.+..+
T Consensus 309 s~~da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 309 SGQDALEKIRAGASLVQLY 327 (367)
T ss_dssp SHHHHHHHHHHTCSEEEES
T ss_pred CHHHHHHHHHcCCCEEEEC
Confidence 5566666667999887664
No 226
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=44.92 E-value=1.5e+02 Score=28.11 Aligned_cols=168 Identities=15% Similarity=0.118 Sum_probs=96.6
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.+.+.+..+++++.+.+.--|+-++...-.+ .|...+..+++.+.+ ..+.|- +.-|+-.+.+.+..-.++|-.+
T Consensus 25 ~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y--~g~~~~~~~v~~~a~--~~VPVa-lHlDHg~~~e~~~~ai~~GFtS- 98 (305)
T 1rvg_A 25 NNMEFLQAVLEAAEEQRSPVILALSEGAMKY--GGRALTLMAVELAKE--ARVPVA-VHLDHGSSYESVLRALRAGFTS- 98 (305)
T ss_dssp CSHHHHHHHHHHHHHTTCCEEEEEEHHHHHH--HHHHHHHHHHHHHHH--CSSCEE-EEEEEECSHHHHHHHHHTTCSE-
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECChhHHhh--CCHHHHHHHHHHHHh--CCCcEE-EECCCCCCHHHHHHHHHcCCCe-
Confidence 3467788888888898886665555321111 245667778887766 345543 3334444667777777888554
Q ss_pred cccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--C-CCH----------HHHHHHHHHHHHcC
Q 017179 237 AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--G-ETP----------DQVVSTMEKVRAAG 303 (376)
Q Consensus 237 ~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl--G-ET~----------ee~~e~L~~Lrel~ 303 (376)
+++|.+..=| ..+.+..-++++.|+.. |+.+-.- +|. | |.. -+-.+..+++++.+
T Consensus 99 -VMiDgS~~p~------eENi~~Tk~vv~~ah~~---gvsVEaE--LG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~Tg 166 (305)
T 1rvg_A 99 -VMIDKSHEDF------ETNVRETRRVVEAAHAV---GVTVEAE--LGRLAGIEEHVAVDEKDALLTNPEEARIFMERTG 166 (305)
T ss_dssp -EEECCTTSCH------HHHHHHHHHHHHHHHHT---TCEEEEE--ESCCCCSCC------CCTTCCCHHHHHHHHHHHC
T ss_pred -eeeCCCCCCH------HHHHHHHHHHHHHHHHc---CCEEEEE--EeeccCccCCccccccccccCCHHHHHHHHHHHC
Confidence 4556543111 12345566788888883 5544332 344 2 322 23457888999999
Q ss_pred CcEEEeecCCCCCCCCCCCc--ccCChHHHHHHHHHHHHHhhhhhc
Q 017179 304 VDVMTFGQYMRPSKRHMPVS--EYITPEAFERYRALGMEMGFRYVA 347 (376)
Q Consensus 304 vd~v~~~qY~~P~~~~~~v~--~~v~pe~~~~l~~~a~~~gf~~~~ 347 (376)
+|.+-+. + +.-|-.-. .. +.=.|++|+++.....+..|.
T Consensus 167 vD~LAva--i--Gt~HG~Yk~~g~-p~L~~~~L~~I~~~~~vpLVl 207 (305)
T 1rvg_A 167 ADYLAVA--I--GTSHGAYKGKGR-PFIDHARLERIARLVPAPLVL 207 (305)
T ss_dssp CSEEEEC--S--SCCSSSBCSSSS-CCCCHHHHHHHHHHCCSCEEE
T ss_pred CCEEEEe--c--CccccccCCCCC-CccCHHHHHHHHHhcCCCEEE
Confidence 9987663 1 12222111 11 112577788887777665553
No 227
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=44.86 E-value=60 Score=34.54 Aligned_cols=78 Identities=15% Similarity=0.143 Sum_probs=51.3
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCC-hHHHHHHHHcCccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN-NGCVREVAKSGLNV 235 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~-~e~l~~L~~aGld~ 235 (376)
.+++..++.++++.+.|++.|.|-=-..-- -...+.++|+.|++..|++.|++=.=+-.|. ......-.++|++.
T Consensus 258 ~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~----~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveAGa~~ 333 (718)
T 3bg3_A 258 YSLQYYMGLAEELVRAGTHILCIKDMAGLL----KPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGADV 333 (718)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEECTTSCC----CHHHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCcCCCc----CHHHHHHHHHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHhCCCE
Confidence 578999999999999999999884111111 1456889999999988877776422221221 22233344789998
Q ss_pred ccc
Q 017179 236 FAH 238 (376)
Q Consensus 236 i~h 238 (376)
+..
T Consensus 334 VD~ 336 (718)
T 3bg3_A 334 VDV 336 (718)
T ss_dssp EEE
T ss_pred EEe
Confidence 754
No 228
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=44.57 E-value=82 Score=30.56 Aligned_cols=106 Identities=10% Similarity=0.112 Sum_probs=61.8
Q ss_pred CchhHHHHHHHHHHCCCc-----EEEEEeeeCC-----CC------C--------cccHHHHHHHHHHHHhhCCCcEEEE
Q 017179 158 DPDEPTNVAEAIASWGLD-----YVVITSVDRD-----DL------A--------DQGSGHFAQTVRKLKELKPNMLIEA 213 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~-----eIvLTsg~r~-----dl------~--------d~g~~~~~elvr~Ik~~~p~i~Ie~ 213 (376)
|.+-..+.++++++.|.+ .|-+|.-..+ +. . ..+.+.+..+.+.-++. ++.+
T Consensus 19 dle~Ak~lI~~A~~aGad~~~d~avKfQt~~~d~l~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~--Gi~~-- 94 (350)
T 3g8r_A 19 NVEHGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVKYVKRFEETRLQPEQMQKLVAEMKAN--GFKA-- 94 (350)
T ss_dssp CSHHHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBCGGGTTCCSSSSHHHHHHTCCCHHHHHHHHHHHHHT--TCEE--
T ss_pred cHHHHHHHHHHHHHhCCcccCCeeEEccccchhhhcChhccCccHHHHHHHHHHhcCCHHHHHHHHHHHHHc--CCcE--
Confidence 456666777777777876 8888864211 11 0 01233344444444332 3333
Q ss_pred ecCCCCCChHHHHHHHHcCccccccc-ccchH-HHHHhhc---------CCCCCHHHHHHHHHHHHH
Q 017179 214 LVPDFRGNNGCVREVAKSGLNVFAHN-IETVE-ELQSAVR---------DHRANFKQSLDVLMMAKD 269 (376)
Q Consensus 214 l~pd~~g~~e~l~~L~~aGld~i~h~-lEtv~-~l~~~vr---------~r~~t~e~~L~vl~~ak~ 269 (376)
++--| +.+.++.|.+.|++.|.++ -|..+ .+++.+. ..-.+.++++..++.+.+
T Consensus 95 ~st~f--D~~svd~l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPviLstGmstl~Ei~~Ave~i~~ 159 (350)
T 3g8r_A 95 ICTPF--DEESVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTAGARREDIDKVVSFMLH 159 (350)
T ss_dssp EEEEC--SHHHHHHHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEECTTCCHHHHHHHHHHHHT
T ss_pred EeccC--CHHHHHHHHHcCCCEEEECcccccCHHHHHHHHhhCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 33334 6788999999899998775 23333 5555543 123577777777777766
No 229
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=44.33 E-value=54 Score=30.42 Aligned_cols=171 Identities=12% Similarity=0.148 Sum_probs=86.7
Q ss_pred HHHHHHHHHHCCCcEEEEEeeeCCCCCc--------------------ccHHHHHHHHHHHHhhCC-CcEEEE-ecCCC-
Q 017179 162 PTNVAEAIASWGLDYVVITSVDRDDLAD--------------------QGSGHFAQTVRKLKELKP-NMLIEA-LVPDF- 218 (376)
Q Consensus 162 i~~~a~al~~~G~~eIvLTsg~r~dl~d--------------------~g~~~~~elvr~Ik~~~p-~i~Ie~-l~pd~- 218 (376)
+.+.++++.+.|+++++||-=. ..+. .....|.+.|+++++++. ++.|-. +--++
T Consensus 20 ~~e~~~~A~~~G~~~i~~TdH~--~~~~~~~~~y~~~~~~~~~~~~~~~~~~~Y~~~i~~l~~~y~~~I~Il~GiE~d~~ 97 (283)
T 3dcp_A 20 VEEMVLKAIELDFDEYSIVEHA--PLSSEFMKNTAGDKEAVTTASMAMSDLPYYFKKMNHIKKKYASDLLIHIGFEVDYL 97 (283)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEC--CCCHHHHHTBCSCTHHHHTTSCCGGGHHHHHHHHHHHHHHTTTTCEEEEEEEEECC
T ss_pred HHHHHHHHHHCCCCEEEEecCC--CCcchhhhcccccccccccccchHHHHHHHHHHHHHHHHHccCCCeEEEEEEeccc
Confidence 4566777789999999999532 2210 113567788888988874 454422 11121
Q ss_pred CCChHHHHHHHHc---Ccccccccccch------------HHHHHh-----hcCCCCCHHHHHHHHHHHHHhCCCCce-E
Q 017179 219 RGNNGCVREVAKS---GLNVFAHNIETV------------EELQSA-----VRDHRANFKQSLDVLMMAKDYVPAGTL-T 277 (376)
Q Consensus 219 ~g~~e~l~~L~~a---Gld~i~h~lEtv------------~~l~~~-----vr~r~~t~e~~L~vl~~ak~~~p~Gi~-t 277 (376)
.+..+..+.+.+. .+|.+=.++..+ +..+.. ..+...-++.+++.+..+.+. |+. .
T Consensus 98 ~g~~d~~~~~l~~~~~~~D~vIgSvH~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~i~~---~l~~~ 174 (283)
T 3dcp_A 98 IGYEDFTRDFLNEYGPQTDDGVLSLHFLEGQGGFRSIDFSAEDYNEGIVQFYGGFEQAQLAYLEGVKQSIEA---DLGLF 174 (283)
T ss_dssp TTCHHHHHHHHHHHGGGCSEEEEECCEEEETTEEEESSSCHHHHHHHTHHHHTSHHHHHHHHHHHHHHHHHC---CCCTT
T ss_pred CCcHHHHHHHHHhcCCCCCEEEEeeeEeCCCCceeeccCCHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh---Ccccc
Confidence 1355666666554 367653333221 222322 121122356666777776662 110 0
Q ss_pred EEeEEEec-C----------C--------CHHHHHHHHHHHHHcCCcE-EEeecCCCCCCCCCCCcccCChHHHHHHHHH
Q 017179 278 KTSIMLGC-G----------E--------TPDQVVSTMEKVRAAGVDV-MTFGQYMRPSKRHMPVSEYITPEAFERYRAL 337 (376)
Q Consensus 278 kt~imvGl-G----------E--------T~ee~~e~L~~Lrel~vd~-v~~~qY~~P~~~~~~v~~~v~pe~~~~l~~~ 337 (376)
..+ ++|+ + . .++.+.+.++.+.+.++-+ |+.+.+..+ ..+ ..+ | ...+.++
T Consensus 175 ~~d-ilgH~Dlir~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~g~~lEiN~~~l~~~-~~~---~~y--p--~~~~~~~ 245 (283)
T 3dcp_A 175 KPR-RMGHISLCQKFQQFFGEDTSDFSEEVMEKFRVILALVKKRDYELDFNTAGLFKP-LCG---ETY--P--PKKIVTL 245 (283)
T ss_dssp CCS-EECCTTGGGTTGGGGTCCGGGCCHHHHHHHHHHHHHHHHHTCEEEEECGGGGST-TCC---SCB--S--CHHHHHH
T ss_pred CCC-EEECCcHHHHcCcccccccccccHHHHHHHHHHHHHHHHcCCEEEEechHhcCC-CCC---CcC--C--HHHHHHH
Confidence 111 2333 1 1 1345778888888888753 555422111 001 111 1 2345556
Q ss_pred HHHHhhhhh
Q 017179 338 GMEMGFRYV 346 (376)
Q Consensus 338 a~~~gf~~~ 346 (376)
+.++|...+
T Consensus 246 ~~~~g~~i~ 254 (283)
T 3dcp_A 246 ASELQIPFV 254 (283)
T ss_dssp HHHTTCCEE
T ss_pred HHHcCCCEE
Confidence 677777655
No 230
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=44.29 E-value=1.7e+02 Score=27.52 Aligned_cols=169 Identities=15% Similarity=0.140 Sum_probs=94.2
Q ss_pred CchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhh-CCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKEL-KPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~-~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
+.|.+..+++++.+.+.--|+-++...-.+- .|...+..+++.+.+. ...+.|- +.-|+..+.+.+....++|-.+
T Consensus 30 n~e~~~avi~AAee~~sPvIlq~s~~~~~~~-~g~~~~~~~v~~~A~~~~~~VPVa-lHlDHg~~~e~i~~ai~~GFtS- 106 (288)
T 3q94_A 30 NLEWTQAILAAAEEEKSPVILGVSEGAARHM-TGFKTVVAMVKALIEEMNITVPVA-IHLDHGSSFEKCKEAIDAGFTS- 106 (288)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEEHHHHHHT-SCHHHHHHHHHHHHHHTTCCSCEE-EEEEEECSHHHHHHHHHHTCSE-
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhhhhhc-CCHHHHHHHHHHHHHhcCCCCcEE-EECCCCCCHHHHHHHHHcCCCe-
Confidence 4677778888888888766655553211110 2456677888877661 2234443 3335444677888888888543
Q ss_pred cccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--CCCH---------HHHHHHHHHHHHcCCc
Q 017179 237 AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--GETP---------DQVVSTMEKVRAAGVD 305 (376)
Q Consensus 237 ~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl--GET~---------ee~~e~L~~Lrel~vd 305 (376)
+.+|.+..=| ..+.+...++++.|+. .|+.+-.- +|. |+.+ -+-.+..+++++.++|
T Consensus 107 -VMiDgS~~p~------eeNi~~Tk~vv~~ah~---~gvsVEaE--lG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD 174 (288)
T 3q94_A 107 -VMIDASHHPF------EENVETTKKVVEYAHA---RNVSVEAE--LGTVGGQEDDVIAEGVIYADPAECKHLVEATGID 174 (288)
T ss_dssp -EEECCTTSCH------HHHHHHHHHHHHHHHT---TTCEEEEE--ESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCS
T ss_pred -EEEeCCCCCH------HHHHHHHHHHHHHHHH---cCCeEEEE--eeeeccccCCcCCccccCCCHHHHHHHHHHHCCC
Confidence 4556543111 1234455688888888 46555432 344 2321 2346778889999999
Q ss_pred EEEeecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhh
Q 017179 306 VMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYV 346 (376)
Q Consensus 306 ~v~~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~ 346 (376)
.+-+. + +.-|-.-... +.=.|++|+++....++..|
T Consensus 175 ~LAva--i--Gt~HG~Y~~~-p~Ld~~~L~~I~~~v~vpLV 210 (288)
T 3q94_A 175 CLAPA--L--GSVHGPYKGE-PNLGFAEMEQVRDFTGVPLV 210 (288)
T ss_dssp EEEEC--S--SCBSSCCSSS-CCCCHHHHHHHHHHHCSCEE
T ss_pred EEEEE--c--CcccCCcCCC-CccCHHHHHHHHHhcCCCEE
Confidence 87663 1 1112111111 11146667777666666444
No 231
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=44.23 E-value=29 Score=32.75 Aligned_cols=65 Identities=18% Similarity=0.281 Sum_probs=46.7
Q ss_pred HHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 164 ~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
+.++++.+.|.++|.|-- + +.+.+.+.++.++..+|.+.+++.-+ . +.+.+..+.+.|+|.+..+
T Consensus 204 eea~eA~~aGaD~I~LDn-----~---~~e~l~~av~~l~~~~~~v~ieASGG-I--t~eni~~~a~tGVD~IsvG 268 (285)
T 1o4u_A 204 EDALRAVEAGADIVMLDN-----L---SPEEVKDISRRIKDINPNVIVEVSGG-I--TEENVSLYDFETVDVISSS 268 (285)
T ss_dssp HHHHHHHHTTCSEEEEES-----C---CHHHHHHHHHHHHHHCTTSEEEEEEC-C--CTTTGGGGCCTTCCEEEEG
T ss_pred HHHHHHHHcCCCEEEECC-----C---CHHHHHHHHHHhhccCCCceEEEECC-C--CHHHHHHHHHcCCCEEEEe
Confidence 556666778999887632 2 25567788888877667788876543 3 5677899999999988654
No 232
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=44.14 E-value=1.6e+02 Score=27.98 Aligned_cols=87 Identities=18% Similarity=0.192 Sum_probs=55.3
Q ss_pred hHHHHHHHHcCcccccccccc-hHHHHHh-hcC-CCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--CCCHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIET-VEELQSA-VRD-HRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--GETPDQVVSTM 296 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEt-v~~l~~~-vr~-r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl--GET~ee~~e~L 296 (376)
.+..+.+.++|.|.+..|.-. ...+... ... --.+.+...++++.+++.. ++++..-+=+|. ..+.++..+.+
T Consensus 73 ~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v--~~PV~vKiR~g~~~~~~~~~~~~~a 150 (350)
T 3b0p_A 73 AEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV--RVPVTVKMRLGLEGKETYRGLAQSV 150 (350)
T ss_dssp HHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC--SSCEEEEEESCBTTCCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh--CCceEEEEecCcCccccHHHHHHHH
Confidence 345667778899988887532 1222111 000 0124677888888888864 344444333465 24567889999
Q ss_pred HHHHHcCCcEEEee
Q 017179 297 EKVRAAGVDVMTFG 310 (376)
Q Consensus 297 ~~Lrel~vd~v~~~ 310 (376)
+.+.+.|+|.+++.
T Consensus 151 ~~l~~aG~d~I~V~ 164 (350)
T 3b0p_A 151 EAMAEAGVKVFVVH 164 (350)
T ss_dssp HHHHHTTCCEEEEE
T ss_pred HHHHHcCCCEEEEe
Confidence 99999999999985
No 233
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=44.11 E-value=50 Score=32.33 Aligned_cols=56 Identities=11% Similarity=0.155 Sum_probs=38.3
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcc--cHHHHHHHHHHHHhhC-CCcEEE
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQ--GSGHFAQTVRKLKELK-PNMLIE 212 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~--g~~~~~elvr~Ik~~~-p~i~Ie 212 (376)
.+++++.+.++.+.+.|++.+-|.|....+..+. ..+.-.+.|++|++.. |++.|.
T Consensus 124 ~~~e~~~~~a~~~~~~G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~ 182 (405)
T 3rr1_A 124 DRPADVIAGMKALQAGGFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFG 182 (405)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCcccccccchhHHHHHHHHHHHHHHhCCCceEE
Confidence 4689999999999999999999954432221111 2345577888998877 565554
No 234
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=44.06 E-value=1.6e+02 Score=26.95 Aligned_cols=123 Identities=18% Similarity=0.245 Sum_probs=66.7
Q ss_pred HHHHHHCCCcEEEEEeeeCCCCCcc--cHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc-ccc
Q 017179 166 AEAIASWGLDYVVITSVDRDDLADQ--GSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN-IET 242 (376)
Q Consensus 166 a~al~~~G~~eIvLTsg~r~dl~d~--g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~-lEt 242 (376)
++.+...|++.|+|= +.|+ ..+...+.++.+........|++ +.. +...++.+.++|++.+-.- +|+
T Consensus 30 ~e~a~~~g~D~vilD------lEhav~~~~k~~~~l~a~~~~~~~~~VRV--n~~--~~~di~~~ld~G~~gI~lP~v~s 99 (261)
T 3qz6_A 30 VRIYAEAGLDYFIVD------CEHAAYTFREINHLVSVAKNAGVSVLVRI--PQV--DRAHVQRLLDIGAEGFMIPGVQS 99 (261)
T ss_dssp HHHHHHTTCSEEEEE------SSSSCCCHHHHHHHHHHHHHHTCEEEEEC--SSC--CHHHHHHHHHHTCCEEEETTCCS
T ss_pred HHHHhcCCcCEEEEe------ccCCCCCHHHHHHHHHHHhhcCCeEEEEe--CCC--CHHHHHHHHhcCCCEEEECCcCC
Confidence 455667899999884 3332 13446666666654322234443 222 4567899999999865332 566
Q ss_pred hHHH---HHhhcC-----CCC-----------CHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcC
Q 017179 243 VEEL---QSAVRD-----HRA-----------NFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAG 303 (376)
Q Consensus 243 v~~l---~~~vr~-----r~~-----------t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~ 303 (376)
.+++ ...++- |+. +..+|++ .+.+ . +...+| -||.+-+.+.=+.+.--+
T Consensus 100 aed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~---~~~~---~---~~v~~m---IEt~~av~~~~eIaa~~~ 167 (261)
T 3qz6_A 100 AETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQ---ERND---E---IFIMAQ---IEHVKAVEDIDSILAVQG 167 (261)
T ss_dssp HHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHH---HHHT---T---CEEEEE---ECCHHHHHTHHHHHTSTT
T ss_pred HHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHh---cCCC---C---eEEEEE---ECCHHHHHHHHHHhCCCC
Confidence 5433 333320 111 1333322 2222 1 233333 499998877655553337
Q ss_pred CcEEEee
Q 017179 304 VDVMTFG 310 (376)
Q Consensus 304 vd~v~~~ 310 (376)
+|.+.||
T Consensus 168 vd~l~iG 174 (261)
T 3qz6_A 168 VDAVIFG 174 (261)
T ss_dssp CCEEEEC
T ss_pred CCEEEEC
Confidence 9999987
No 235
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=43.94 E-value=84 Score=29.97 Aligned_cols=149 Identities=15% Similarity=0.072 Sum_probs=81.9
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhC-CCcEEEEecCCCCC--ChH----HHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRG--NNG----CVREVA 229 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~-p~i~Ie~l~pd~~g--~~e----~l~~L~ 229 (376)
.++++..+.++.+.+.|++.+-|=.|.. + .+.-.+.|++|++.. |++.+.+ |.++ +.+ .++.|.
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~----~--~~~~~e~v~avr~a~G~d~~l~v---Dan~~~~~~~a~~~~~~l~ 215 (371)
T 2ovl_A 145 LPVADLKTQADRFLAGGFRAIKMKVGRP----D--LKEDVDRVSALREHLGDSFPLMV---DANMKWTVDGAIRAARALA 215 (371)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEECCCS----S--HHHHHHHHHHHHHHHCTTSCEEE---ECTTCSCHHHHHHHHHHHG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCC----C--HHHHHHHHHHHHHHhCCCCeEEE---ECCCCCCHHHHHHHHHHHH
Confidence 4688888899999999999888765532 1 344578888888865 5555532 1111 322 334444
Q ss_pred HcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 230 KSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 230 ~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
+.|++.+ |- - +. ..++ +.++.+++.. +++ |+ .+|+.....+..+.+++-.+|++.+
T Consensus 216 ~~~i~~i----Eq---P---~~--~~d~----~~~~~l~~~~--~iP----I~--~dE~~~~~~~~~~~i~~~~~d~v~i 271 (371)
T 2ovl_A 216 PFDLHWI----EE---P---TI--PDDL----VGNARIVRES--GHT----IA--GGENLHTLYDFHNAVRAGSLTLPEP 271 (371)
T ss_dssp GGCCSEE----EC---C---SC--TTCH----HHHHHHHHHH--CSC----EE--ECTTCCSHHHHHHHHHHTCCSEECC
T ss_pred hcCCCEE----EC---C---CC--cccH----HHHHHHHhhC--CCC----EE--eCCCCCCHHHHHHHHHcCCCCEEee
Confidence 4444432 21 0 11 2233 3334444421 133 22 2344434444445556677888766
Q ss_pred ecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhccc
Q 017179 310 GQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASG 349 (376)
Q Consensus 310 ~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sg 349 (376)
- +.+-+- ..+...+..+|++.|...+..+
T Consensus 272 k----~~~~GG-------i~~~~~i~~~A~~~gi~~~~h~ 300 (371)
T 2ovl_A 272 D----VSNIGG-------YTTFRKVAALAEANNMLLTSHG 300 (371)
T ss_dssp C----TTTTTS-------HHHHHHHHHHHHHTTCCEEECS
T ss_pred C----ccccCC-------HHHHHHHHHHHHHcCCeEcccc
Confidence 3 322121 4567778888888887766544
No 236
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=43.80 E-value=1.8e+02 Score=26.06 Aligned_cols=76 Identities=11% Similarity=0.116 Sum_probs=46.0
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCCCCCcc---------------cHHHHHHHHHHHHhhCCCcEEEEec---CCCCC
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQ---------------GSGHFAQTVRKLKELKPNMLIEALV---PDFRG 220 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~---------------g~~~~~elvr~Ik~~~p~i~Ie~l~---pd~~g 220 (376)
.++..+.++++.+.|++.|.|-.--.+.+.|+ ..+...+++++|++.. ++.+.+.. |.+..
T Consensus 31 ~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~-~~Pv~~m~~~~~~~~~ 109 (262)
T 1rd5_A 31 LATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPEL-SCPVVLLSYYKPIMFR 109 (262)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGC-SSCEEEECCSHHHHSC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC-CCCEEEEecCcHHHHH
Confidence 47888999999999999998832222212221 1345678889998763 44454432 11111
Q ss_pred ChHHHHHHHHcCcccccc
Q 017179 221 NNGCVREVAKSGLNVFAH 238 (376)
Q Consensus 221 ~~e~l~~L~~aGld~i~h 238 (376)
.++.+.++|+|.+-.
T Consensus 110 ---~~~~a~~aGadgv~v 124 (262)
T 1rd5_A 110 ---SLAKMKEAGVHGLIV 124 (262)
T ss_dssp ---CTHHHHHTTCCEEEC
T ss_pred ---HHHHHHHcCCCEEEE
Confidence 134488999995543
No 237
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=43.60 E-value=2e+02 Score=26.57 Aligned_cols=118 Identities=22% Similarity=0.307 Sum_probs=69.1
Q ss_pred HHHHHHHHHCCC-cEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccccc
Q 017179 163 TNVAEAIASWGL-DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIE 241 (376)
Q Consensus 163 ~~~a~al~~~G~-~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lE 241 (376)
..+++.+.+.|. +.++++|-+ .+.++.+++..|.+.+..+.+ +.+.+..+...|.+... .+.
T Consensus 145 ~~v~~~l~~~~~~~~vii~Sf~------------~~~l~~~~~~~p~~~~~~l~~----~~~~l~~~~~~g~~~~~-~~~ 207 (292)
T 3mz2_A 145 ERTAQLITDMQAEPYVMITVHD------------GASARFFYEKNPNFMFEAFVK----TKEAVQDYEDNGIPWSH-IMA 207 (292)
T ss_dssp HHHHHHHHHTTCTTTEEEEESS------------HHHHHHHHHHCTTCCEEEECC----SHHHHHHHHHTTCCGGG-EEE
T ss_pred HHHHHHHHHcCCCCCEEEEECC------------HHHHHHHHHHCCCCeEEEEeC----CHHHHHHHHHhCCChhh-eee
Confidence 345566667776 678887642 246777888889888777664 45566777666653210 001
Q ss_pred chHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC--CCHHHHHHHHHHHHHcCCcEEEe
Q 017179 242 TVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG--ETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 242 tv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlG--ET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
.+. ...+. ..-+.++.+|+ .|+.+....+-..- +...+-.+.+..|.+.|||.|.-
T Consensus 208 -------~~~-~~~~~-~~~~~V~~ah~---~G~~V~vWTv~t~d~~~~~~~~~~~~~~L~~~GVDgIiT 265 (292)
T 3mz2_A 208 -------YVG-PKITP-EVREVIDMLHE---RGVMCMISTAPSDDKLSTPESRAEAYRMIIRQGVDIIES 265 (292)
T ss_dssp -------EEE-SSCCH-HHHHHHHHHHH---TTBCEEEECTTTGGGSSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred -------eec-ccccc-cCHHHHHHHHH---CCCEEEEEeCCCcchhhhccccHHHHHHHHHcCCCEEEe
Confidence 011 12222 22577889998 57765543211110 12234467889999999998854
No 238
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=43.59 E-value=66 Score=28.54 Aligned_cols=91 Identities=15% Similarity=0.082 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccc
Q 017179 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNI 240 (376)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~l 240 (376)
...+.++.+.+.|+..|++|+..++... .|.+ .++++++++.. ++.|-+. +... +.+.+..+.++|+|.+-.+
T Consensus 153 ~~~e~~~~~~~~G~~~i~~~~~~~~g~~-~g~~--~~~i~~l~~~~-~ipvia~-GGI~-~~~d~~~~~~~Gadgv~vg- 225 (252)
T 1ka9_F 153 HAVEWAVKGVELGAGEILLTSMDRDGTK-EGYD--LRLTRMVAEAV-GVPVIAS-GGAG-RMEHFLEAFQAGAEAALAA- 225 (252)
T ss_dssp EHHHHHHHHHHHTCCEEEEEETTTTTTC-SCCC--HHHHHHHHHHC-SSCEEEE-SCCC-SHHHHHHHHHTTCSEEEES-
T ss_pred cHHHHHHHHHHcCCCEEEEecccCCCCc-CCCC--HHHHHHHHHHc-CCCEEEe-CCCC-CHHHHHHHHHCCCHHHHHH-
Confidence 4566677778899999999976654322 1221 45677777654 2333322 2221 5688888888998876543
Q ss_pred cchHHHHHhhcCCCCCHHHHHHHHH
Q 017179 241 ETVEELQSAVRDHRANFKQSLDVLM 265 (376)
Q Consensus 241 Etv~~l~~~vr~r~~t~e~~L~vl~ 265 (376)
..+ +. ...++++.++.++
T Consensus 226 ---sal---~~-~~~~~~~~~~~l~ 243 (252)
T 1ka9_F 226 ---SVF---HF-GEIPIPKLKRYLA 243 (252)
T ss_dssp ---HHH---HT-TSSCHHHHHHHHH
T ss_pred ---HHH---Hc-CCCCHHHHHHHHH
Confidence 233 22 2346666665543
No 239
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=43.41 E-value=58 Score=28.36 Aligned_cols=65 Identities=14% Similarity=0.067 Sum_probs=36.1
Q ss_pred HHHHHHHHHHCCCcEEEEEeeeCCCCCcccH---HHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccc
Q 017179 162 PTNVAEAIASWGLDYVVITSVDRDDLADQGS---GHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (376)
Q Consensus 162 i~~~a~al~~~G~~eIvLTsg~r~dl~d~g~---~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h 238 (376)
+.+.++++.+.|++.|.|.--+.+ .... ..+++.++.+...+ ++.+ +..+ .++.+.++|+|.+..
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~~~---~~~~~~~~~~~~~l~~~~~~~-~v~v--~v~~------~~~~a~~~gad~v~l 100 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKGGD---ALTGEARIKFAEKAQAACREA-GVPF--IVND------DVELALNLKADGIHI 100 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCSTT---CCCHHHHHHHHHHHHHHHHHH-TCCE--EEES------CHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHCCCCEEEEecCCCC---HhHHHHHHHHHHHHHHHHHHc-CCeE--EEcC------HHHHHHHcCCCEEEE
Confidence 778888999999999987632211 1112 23334444433321 2222 2222 256777889887744
No 240
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=43.40 E-value=80 Score=30.29 Aligned_cols=49 Identities=6% Similarity=-0.075 Sum_probs=36.6
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEE
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIE 212 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie 212 (376)
.++++..+.++.+.+.|++.|-|-.|. + ...-.+.|++|++..+++.+.
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik~g~-----~--~~~~~e~v~avr~a~gd~~l~ 194 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLKVGR-----G--EKLDLEITAAVRGEIGDARLR 194 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECCS-----C--HHHHHHHHHHHHTTSTTCEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcCC-----C--HHHHHHHHHHHHHHcCCcEEE
Confidence 367888888888889999999886542 1 445678999999877655543
No 241
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=43.39 E-value=35 Score=33.20 Aligned_cols=76 Identities=9% Similarity=0.017 Sum_probs=50.1
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcC-ccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG-LNV 235 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG-ld~ 235 (376)
.+.++..+.++++.+.|+.+|.+.++.....+.+. ..+.++.|++..+ +.|- ..+.+ +.+....+.+.| +|.
T Consensus 252 ~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~---~~~~~~~ik~~~~-iPvi-~~Ggi--~~~~a~~~l~~g~aD~ 324 (377)
T 2r14_A 252 EPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITY---PEGFREQMRQRFK-GGLI-YCGNY--DAGRAQARLDDNTADA 324 (377)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCC------CC---CTTHHHHHHHHCC-SEEE-EESSC--CHHHHHHHHHTTSCSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcc---hHHHHHHHHHHCC-CCEE-EECCC--CHHHHHHHHHCCCceE
Confidence 45678889999999999999999886432111110 2356677777653 4332 34566 577788888877 888
Q ss_pred cccc
Q 017179 236 FAHN 239 (376)
Q Consensus 236 i~h~ 239 (376)
+..+
T Consensus 325 V~ig 328 (377)
T 2r14_A 325 VAFG 328 (377)
T ss_dssp EEES
T ss_pred Eeec
Confidence 8775
No 242
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=43.28 E-value=1e+02 Score=26.41 Aligned_cols=72 Identities=14% Similarity=0.144 Sum_probs=45.4
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEE--EecCCCCCChHHHHHHHHcCcc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIE--ALVPDFRGNNGCVREVAKSGLN 234 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie--~l~pd~~g~~e~l~~L~~aGld 234 (376)
.+.++.++.++++.. |++.+-++-+. .+. .| .+.|+.|++.+|+..+- +-+-|. ....++.+.++|+|
T Consensus 10 ~~~~~~~~~~~~~~~-~v~~iev~~~~--~~~-~g----~~~i~~l~~~~~~~~i~~~l~~~di--~~~~~~~a~~~Gad 79 (207)
T 3ajx_A 10 LSTEAALELAGKVAE-YVDIIELGTPL--IKA-EG----LSVITAVKKAHPDKIVFADMKTMDA--GELEADIAFKAGAD 79 (207)
T ss_dssp SCHHHHHHHHHHHGG-GCSEEEECHHH--HHH-HC----THHHHHHHHHSTTSEEEEEEEECSC--HHHHHHHHHHTTCS
T ss_pred CCHHHHHHHHHHhhc-cCCEEEECcHH--HHh-hC----HHHHHHHHHhCCCCeEEEEEEecCc--cHHHHHHHHhCCCC
Confidence 457888888988877 88888773221 011 12 35788888877654433 233231 12347889999999
Q ss_pred cccc
Q 017179 235 VFAH 238 (376)
Q Consensus 235 ~i~h 238 (376)
.+..
T Consensus 80 ~v~v 83 (207)
T 3ajx_A 80 LVTV 83 (207)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8873
No 243
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=43.23 E-value=29 Score=32.32 Aligned_cols=70 Identities=14% Similarity=0.152 Sum_probs=42.0
Q ss_pred hHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
++.+..+.+.++|++.|+ |||-.....+ |.+ +|+++.+... .|+++.+.=. +.+.+..|...|++.+..+
T Consensus 129 d~~~ale~L~~lG~~rIL-TSG~~~~a~~-g~~----~L~~Lv~~a~--~i~Im~GgGv-~~~Ni~~l~~tGv~e~H~S 198 (256)
T 1twd_A 129 NPLYTLNNLAELGIARVL-TSGQKSDALQ-GLS----KIMELIAHRD--APIIMAGAGV-RAENLHHFLDAGVLEVHSS 198 (256)
T ss_dssp CHHHHHHHHHHHTCCEEE-ECTTSSSTTT-THH----HHHHHHTSSS--CCEEEEESSC-CTTTHHHHHHHTCSEEEEC
T ss_pred CHHHHHHHHHHcCCCEEE-CCCCCCCHHH-HHH----HHHHHHHhhC--CcEEEecCCc-CHHHHHHHHHcCCCeEeEC
Confidence 345667888889999986 8876544443 444 4444434332 5666654211 4455666668888877643
No 244
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=42.81 E-value=1.2e+02 Score=23.74 Aligned_cols=58 Identities=9% Similarity=0.095 Sum_probs=36.0
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHH
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD 269 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~ 269 (376)
.++++.|++..|.+.|-+++..- +.+.+....++|++.| +. +..+.++.++.++.+.+
T Consensus 77 ~~~~~~l~~~~~~~~ii~~s~~~--~~~~~~~~~~~g~~~~-------------l~-Kp~~~~~l~~~i~~~~~ 134 (152)
T 3eul_A 77 AQVAAAVRSYELPTRVLLISAHD--EPAIVYQALQQGAAGF-------------LL-KDSTRTEIVKAVLDCAK 134 (152)
T ss_dssp HHHHHHHHHTTCSCEEEEEESCC--CHHHHHHHHHTTCSEE-------------EE-TTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCeEEEEEccC--CHHHHHHHHHcCCCEE-------------Ee-cCCCHHHHHHHHHHHHc
Confidence 46777777777777776666544 5566667777776654 22 23455666666655554
No 245
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=42.66 E-value=28 Score=31.01 Aligned_cols=74 Identities=12% Similarity=0.098 Sum_probs=46.7
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccc
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h 238 (376)
.+++.+.++++.+.|++.+.++..+.+.. ..+ ...+.+++|+ .. ++.+-+. ....+.+.++.+.++|+|.+..
T Consensus 29 ~~~~~~~a~~~~~~Gad~i~v~d~~~~~~-~~~--~~~~~i~~i~-~~-~ipvi~~--Ggi~~~~~~~~~~~~Gad~V~l 101 (241)
T 1qo2_A 29 EKDPVELVEKLIEEGFTLIHVVDLSNAIE-NSG--ENLPVLEKLS-EF-AEHIQIG--GGIRSLDYAEKLRKLGYRRQIV 101 (241)
T ss_dssp SSCHHHHHHHHHHTTCCCEEEEEHHHHHH-CCC--TTHHHHHHGG-GG-GGGEEEE--SSCCSHHHHHHHHHTTCCEEEE
T ss_pred CcCHHHHHHHHHHcCCCEEEEeccccccc-CCc--hhHHHHHHHH-hc-CCcEEEE--CCCCCHHHHHHHHHCCCCEEEE
Confidence 35788899999999999999975432100 001 1356777776 43 2333222 2222678888899999987755
Q ss_pred c
Q 017179 239 N 239 (376)
Q Consensus 239 ~ 239 (376)
+
T Consensus 102 g 102 (241)
T 1qo2_A 102 S 102 (241)
T ss_dssp C
T ss_pred C
Confidence 4
No 246
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=42.64 E-value=2.9e+02 Score=28.22 Aligned_cols=137 Identities=12% Similarity=0.116 Sum_probs=80.1
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHc--Ccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS--GLN 234 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a--Gld 234 (376)
.+++++++.|++..+.|.+-|-|=-|. +.. ...+.+.+++..|++.. ++.|.+=+ + +.+.++.-.++ |.+
T Consensus 337 ~~~~~a~~~A~~~v~~GAdiIDIgpg~-~~v--~~~ee~~rvv~~i~~~~-~vpisIDT--~--~~~v~eaal~~~~G~~ 408 (566)
T 1q7z_A 337 GNEEIVIKEAKTQVEKGAEVLDVNFGI-ESQ--IDVRYVEKIVQTLPYVS-NVPLSLDI--Q--NVDLTERALRAYPGRS 408 (566)
T ss_dssp TCCHHHHHHHHHHHHTTCSEEEEECSS-GGG--SCHHHHHHHHHHHHHHT-CSCEEEEC--C--CHHHHHHHHHHCSSCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCC-CCC--CHHHHHHHHHHHHHhhC-CceEEEeC--C--CHHHHHHHHHhcCCCC
Confidence 378999999999999999988875221 111 12566778888887653 34444322 2 56788877777 888
Q ss_pred cccc-cccch--HHHHHh----------hcCC---CCCHHHHHHHH----HHHHHhCCCCce--EEEeEEE---ecCCCH
Q 017179 235 VFAH-NIETV--EELQSA----------VRDH---RANFKQSLDVL----MMAKDYVPAGTL--TKTSIML---GCGETP 289 (376)
Q Consensus 235 ~i~h-~lEtv--~~l~~~----------vr~r---~~t~e~~L~vl----~~ak~~~p~Gi~--tkt~imv---GlGET~ 289 (376)
.+|- +.+.. +++.+- |..+ ..+|++.++.+ +.+.+ .|+. +--+-.+ |+|-..
T Consensus 409 iINdis~~~~~~~~~~~~~~~~g~~vV~m~~~~~~p~t~~~~~~~l~~~~~~a~~---~Gi~~~IilDPg~~~igfgk~~ 485 (566)
T 1q7z_A 409 LFNSAKVDEEELEMKINLLKKYGGTLIVLLMGKDVPKSFEERKEYFEKALKILER---HDFSDRVIFDPGVLPLGAEGKP 485 (566)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCCEEEEESCSSSCCCSHHHHHHHHHHHHHHHHH---TTCGGGEEEECCCCCTTTTCCH
T ss_pred EEEECCcchhhHHHHHHHHHHhCCeEEEEeCCCCCcCCHHHHHHHHHHHHHHHHH---CCCCCcEEEeCCCCcccCcHHH
Confidence 7754 22222 333332 2211 23466555544 34444 3664 3333334 666655
Q ss_pred HHHHHHHHHHHHcCC
Q 017179 290 DQVVSTMEKVRAAGV 304 (376)
Q Consensus 290 ee~~e~L~~Lrel~v 304 (376)
-++++.+..+++.++
T Consensus 486 ~~~l~~~~~~~~~g~ 500 (566)
T 1q7z_A 486 VEVLKTIEFISSKGF 500 (566)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCC
Confidence 667777777777754
No 247
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=42.56 E-value=14 Score=36.73 Aligned_cols=80 Identities=10% Similarity=0.056 Sum_probs=49.3
Q ss_pred CCchhHHHHHHHHHH-CCCcEEEEEeeeCCC--C--CcccHHHHHHHHHHHHhhCC-CcEEEEecCCCCCChHHHHHHHH
Q 017179 157 PDPDEPTNVAEAIAS-WGLDYVVITSVDRDD--L--ADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAK 230 (376)
Q Consensus 157 l~~eEi~~~a~al~~-~G~~eIvLTsg~r~d--l--~d~g~~~~~elvr~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~ 230 (376)
++.+|..+.++.+.+ .|+++|.+++++... . +..|.....++++.|++..+ .+.|- ..+.+. +.+..+.+.+
T Consensus 261 ~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI-~~GgI~-t~e~Ae~~L~ 338 (419)
T 3l5a_A 261 YTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLI-ASGGIN-SPESALDALQ 338 (419)
T ss_dssp ECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEE-ECSSCC-SHHHHHHHGG
T ss_pred CCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEE-EECCCC-CHHHHHHHHH
Confidence 567899999999999 999999999875311 0 00111111234555665443 24332 334432 6777777777
Q ss_pred cCccccccc
Q 017179 231 SGLNVFAHN 239 (376)
Q Consensus 231 aGld~i~h~ 239 (376)
. +|.+..+
T Consensus 339 ~-aDlVaiG 346 (419)
T 3l5a_A 339 H-ADMVGMS 346 (419)
T ss_dssp G-CSEEEES
T ss_pred h-CCcHHHH
Confidence 7 8887765
No 248
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=42.20 E-value=74 Score=31.59 Aligned_cols=81 Identities=12% Similarity=0.165 Sum_probs=52.5
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeC--CCCC-----cc---c---HHHHHHHHHHHHhhCC-CcEEEEecCCCCCCh
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDR--DDLA-----DQ---G---SGHFAQTVRKLKELKP-NMLIEALVPDFRGNN 222 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r--~dl~-----d~---g---~~~~~elvr~Ik~~~p-~i~Ie~l~pd~~g~~ 222 (376)
++.+++.+.|+.+.+.|++-|+++.... .|+. .+ | ...-.++|++|++..+ ++.|-. .+... +.
T Consensus 280 ~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg-~GGI~-s~ 357 (415)
T 3i65_A 280 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIA-SGGIF-SG 357 (415)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEE-CSSCC-SH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEE-ECCCC-CH
Confidence 4556899999999999999999986542 2321 12 2 1334578888887653 455432 33332 55
Q ss_pred HHHHHHHHcCccccccc
Q 017179 223 GCVREVAKSGLNVFAHN 239 (376)
Q Consensus 223 e~l~~L~~aGld~i~h~ 239 (376)
+.+.++..+|+|.+..+
T Consensus 358 eDa~e~l~aGAd~VqIg 374 (415)
T 3i65_A 358 LDALEKIEAGASVCQLY 374 (415)
T ss_dssp HHHHHHHHHTEEEEEES
T ss_pred HHHHHHHHcCCCEEEEc
Confidence 55666667999987664
No 249
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=42.07 E-value=51 Score=29.57 Aligned_cols=141 Identities=10% Similarity=0.067 Sum_probs=75.3
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhC--CCcEEEEecCCCCCChHHHHHH-HHcCccc
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK--PNMLIEALVPDFRGNNGCVREV-AKSGLNV 235 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~--p~i~Ie~l~pd~~g~~e~l~~L-~~aGld~ 235 (376)
.+.+.+.++.+..+|++.|++.+|..+.-.+...+.+++.++.+.+.. -++.+. +.+.. .+.+.+..| .+.+.+.
T Consensus 101 ~~~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~-lE~~~-~~~~~~~~l~~~~~~~~ 178 (290)
T 3tva_A 101 VAEMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVH-LETGQ-ESADHLLEFIEDVNRPN 178 (290)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEE-EECCS-SCHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEE-EecCC-CCHHHHHHHHHhcCCCC
Confidence 466677788888999999999665332212223455666666654332 245443 22222 244444444 4445455
Q ss_pred ccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeE-------------EEecCCCHHHHHHHHHHHHHc
Q 017179 236 FAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSI-------------MLGCGETPDQVVSTMEKVRAA 302 (376)
Q Consensus 236 i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~i-------------mvGlGET~ee~~e~L~~Lrel 302 (376)
+...+++..-.. . .+.+..++++. +...... +.++-.. -+-+|+-.-++.+.++.|++.
T Consensus 179 ~g~~~D~~h~~~---~-g~~d~~~~l~~---~~~~i~~-vHl~D~~~~~~~~~g~~~~~~~~~G~G~id~~~~~~~L~~~ 250 (290)
T 3tva_A 179 LGINFDPANMIL---Y-GTGNPIEALRK---VARYVRS-IHCKDALWAPVNERGKSWGQEVALGTGDVGMEAYLTTLWEI 250 (290)
T ss_dssp EEEEECHHHHHH---T-TCSCHHHHHHH---HGGGEEE-EEECEEECCCGGGBTTBCCEEESTTSSSSCHHHHHHHHHHT
T ss_pred EEEEeccHHHHH---h-CCCCHHHHHHH---HHhhheE-EEeccccCCCccccccccccccCCCCceeCHHHHHHHHHHc
Confidence 666666655221 1 12455544443 3333222 3333321 112355556788889999999
Q ss_pred CCc-EEEe
Q 017179 303 GVD-VMTF 309 (376)
Q Consensus 303 ~vd-~v~~ 309 (376)
+.+ .+.+
T Consensus 251 gy~g~~~l 258 (290)
T 3tva_A 251 GYRGPLTI 258 (290)
T ss_dssp TCCSCEEE
T ss_pred CCCCcEEE
Confidence 987 5555
No 250
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=42.05 E-value=1.3e+02 Score=28.24 Aligned_cols=168 Identities=13% Similarity=0.114 Sum_probs=94.7
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.+.+.+..+++++.+.+.--|+-++... ....|...+..+++.+.+..+ +.|- +.-|+..+.+.+....++|-.
T Consensus 26 ~n~e~~~avl~AAe~~~sPvIlq~s~~~--~~y~g~~~~~~~v~~~a~~~~-VPVa-lHlDHg~~~e~i~~ai~~GFt-- 99 (286)
T 1gvf_A 26 HNAETIQAILEVCSEMRSPVILAGTPGT--FKHIALEEIYALCSAYSTTYN-MPLA-LHLDHHESLDDIRRKVHAGVR-- 99 (286)
T ss_dssp CSHHHHHHHHHHHHHHTCCCEEEECTTH--HHHSCHHHHHHHHHHHHHHTT-SCBE-EEEEEECCHHHHHHHHHTTCC--
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECChhH--HhhcCHHHHHHHHHHHHHhCC-CcEE-EEcCCCCCHHHHHHHHHcCCC--
Confidence 3467777788888888775555444321 111256778888888877653 4332 333444467888888888854
Q ss_pred cccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--CCCH-----------HHHHHHHHHHHHcC
Q 017179 237 AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--GETP-----------DQVVSTMEKVRAAG 303 (376)
Q Consensus 237 ~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl--GET~-----------ee~~e~L~~Lrel~ 303 (376)
.+.+|.+..-| ..+.+...++++.|+.. |+.+-.- +|. |+.+ -+-.+..+++++.+
T Consensus 100 SVMiDgS~lp~------eeNi~~Tk~vv~~ah~~---gvsVEaE--lG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~Tg 168 (286)
T 1gvf_A 100 SAMIDGSHFPF------AENVKLVKSVVDFCHSQ---DCSVEAE--LGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTG 168 (286)
T ss_dssp EEEECCTTSCH------HHHHHHHHHHHHHHHHT---TCEEEEE--ESCCC-----------CCSSCCHHHHHHHHHHHC
T ss_pred eEEECCCCCCH------HHHHHHHHHHHHHHHHc---CCEEEEE--EeeccCcccCcccccccccCCCHHHHHHHHHHHC
Confidence 34566554111 12345566888888883 5544332 344 2111 12457788999999
Q ss_pred CcEEEeecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhh
Q 017179 304 VDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYV 346 (376)
Q Consensus 304 vd~v~~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~ 346 (376)
+|.+-+. + +.-|-.-... +.=.|++|++++...++..|
T Consensus 169 vD~LAva--i--Gt~HG~Y~~~-p~Ld~~~L~~I~~~~~vpLV 206 (286)
T 1gvf_A 169 VDSLAVA--I--GTAHGLYSKT-PKIDFQRLAEIREVVDVPLV 206 (286)
T ss_dssp CSEEEEC--S--SCCSSCCSSC-CCCCHHHHHHHHHHCCSCEE
T ss_pred CCEEEee--c--CccccCcCCC-CccCHHHHHHHHHhcCCCEE
Confidence 9987663 1 1222211111 11246667777666665444
No 251
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=42.05 E-value=81 Score=30.56 Aligned_cols=69 Identities=17% Similarity=0.212 Sum_probs=51.3
Q ss_pred EEeEEEec--CCCHHHHHHHHHHHHHcCCcEEEeecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhcc
Q 017179 278 KTSIMLGC--GETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVAS 348 (376)
Q Consensus 278 kt~imvGl--GET~ee~~e~L~~Lrel~vd~v~~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~s 348 (376)
..-+|.|. .|+.+...++.+.+++.+.+.+-+ |++.|......... .-.+.++.+++++.+.|..++.+
T Consensus 106 ~~~vIAgpcs~es~e~a~~~a~~~k~aGa~~vr~-q~fKprTs~~~f~g-lg~egl~~l~~~~~e~Gl~~~te 176 (350)
T 1vr6_A 106 YFTIIAGPCSVEGREMLMETAHFLSELGVKVLRG-GAYKPRTSPYSFQG-LGEKGLEYLREAADKYGMYVVTE 176 (350)
T ss_dssp EEEEEEECSBCCCHHHHHHHHHHHHHTTCCEEEC-BSCCCCCSTTSCCC-CTHHHHHHHHHHHHHHTCEEEEE
T ss_pred CeEEEEeCCCcCCHHHHHHHHHHHHHcCCCeeee-eEEeCCCChHhhcC-CCHHHHHHHHHHHHHcCCcEEEE
Confidence 46788888 899999999999999999999877 66666211111111 23578999999999999877643
No 252
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=41.76 E-value=80 Score=28.23 Aligned_cols=136 Identities=11% Similarity=0.113 Sum_probs=75.3
Q ss_pred HHHHHHHHCCCcEEEEEeeeCCCCCcccHH----HHHHHHHHHHhhCCCcE-EEEecCCC-CCChHHHHHHHHcCccccc
Q 017179 164 NVAEAIASWGLDYVVITSVDRDDLADQGSG----HFAQTVRKLKELKPNML-IEALVPDF-RGNNGCVREVAKSGLNVFA 237 (376)
Q Consensus 164 ~~a~al~~~G~~eIvLTsg~r~dl~d~g~~----~~~elvr~Ik~~~p~i~-Ie~l~pd~-~g~~e~l~~L~~aGld~i~ 237 (376)
+.++++.+.| .+|-.=|-.+.++.....+ .+....+.|++... .. +..+-+-+ .-+...++.+++.|...+.
T Consensus 86 ~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G-~~~~~~fr~P~G~~~~~~~~~l~~~G~~~v~ 163 (240)
T 1ny1_A 86 QLIKRMSDEG-HIIGNHSFHHPDLTTKTADQIQDELDSVNEEVYKITG-KQDNLYLRPPRGVFSEYVLKETKRLGYQTVF 163 (240)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHS-CCCCCEECCGGGEECHHHHHHHHHTTCEEBC
T ss_pred HHHHHHHHCc-CChhcCCccccccccCCHHHHHHHHHHHHHHHHHHhC-CCCCcEEeCCCCCCCHHHHHHHHHcCCEEEE
Confidence 3566677788 4664444445555432222 23333444544321 22 22333211 1268889999999988777
Q ss_pred ccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-C--CCHHHHHHHHHHHHHcCCcEEEeecCC
Q 017179 238 HNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-G--ETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (376)
Q Consensus 238 h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-G--ET~ee~~e~L~~Lrel~vd~v~~~qY~ 313 (376)
-++++.+-... ...+.+... +.+.+....| +||+-+ + .|.+.+-+.+..|++.|..++++.+.+
T Consensus 164 w~~d~~Dw~~~----~~~~~~~~~---~~v~~~~~~g-----~Iil~Hd~~~~t~~aL~~ii~~l~~~Gy~fvtl~el~ 230 (240)
T 1ny1_A 164 WSVAFVDWKIN----NQKGKKYAY---DHMIKQAHPG-----AIYLLHTVSRDNAEALDDAITDLKKQGYTFKSIDDLM 230 (240)
T ss_dssp CSBCCSCCCGG----GCCCHHHHH---HHHHHTCCTT-----EEEEECSCSTTHHHHHHHHHHHHHHHTCEEECHHHHH
T ss_pred CcccccccCCc----CCCCHHHHH---HHHHhCCCCC-----eEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEhHHhh
Confidence 77766541110 112333333 2332321123 366666 2 577888899999999999999987554
No 253
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=41.68 E-value=1.1e+02 Score=27.28 Aligned_cols=105 Identities=17% Similarity=0.187 Sum_probs=62.2
Q ss_pred HHHHHHHHCCC-cEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccc
Q 017179 164 NVAEAIASWGL-DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIET 242 (376)
Q Consensus 164 ~~a~al~~~G~-~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEt 242 (376)
.+++.+.+.|+ +.++++|-+ .+.++.+++..|++.+..+..... .+....+...+++.+......
T Consensus 133 ~v~~~l~~~~~~~~vii~SF~------------~~~l~~~~~~~p~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~~~~ 198 (252)
T 2pz0_A 133 KLIKAIKEYNFEERVIISSFN------------HYSLRDVKKMAPHLKIGLLYQCGL--VEPWHMALRMEAYSLHPFYFN 198 (252)
T ss_dssp HHHHHHHHTTCTTTEEEEESB------------HHHHHHHHHHCTTSEEEEEECSBC--SSTHHHHHHTTCSEEEEBGGG
T ss_pred HHHHHHHhcCCCCCEEEEeCC------------HHHHHHHHHHCCCCCEEEEecCcc--ccHHHHHHHcCCeEEecchhc
Confidence 45566667776 568888743 246777888889988877765432 223345556666655443211
Q ss_pred hHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 243 VEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 243 v~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
+. -+.++.+++ .|+.+.+.-+ .+.+ .++.+.+.|+|.|.-
T Consensus 199 -------~~---------~~~v~~~~~---~G~~v~~wTv----n~~~----~~~~l~~~GvdgIiT 238 (252)
T 2pz0_A 199 -------II---------PELVEGCKK---NGVKLFPWTV----DRKE----DMERMIKAGVDGIIT 238 (252)
T ss_dssp -------CC---------HHHHHHHHH---TTCEECCBCC----CSHH----HHHHHHHHTCSEEEE
T ss_pred -------CC---------HHHHHHHHH---CCCEEEEECC----CCHH----HHHHHHHcCCCEEEc
Confidence 11 256777777 4666544321 3333 355667889998754
No 254
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=41.38 E-value=1.2e+02 Score=23.23 Aligned_cols=58 Identities=5% Similarity=0.178 Sum_probs=35.2
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHH
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD 269 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~ 269 (376)
.++++.|++..|.+.|-+++..- +.+.......+|++.| +. +..+.++.++.++.+.+
T Consensus 65 ~~~~~~l~~~~~~~~ii~ls~~~--~~~~~~~~~~~ga~~~-------------l~-Kp~~~~~L~~~i~~~~~ 122 (133)
T 3b2n_A 65 LEVLAEIRKKHLNIKVIIVTTFK--RPGYFEKAVVNDVDAY-------------VL-KERSIEELVETINKVNN 122 (133)
T ss_dssp HHHHHHHHHTTCSCEEEEEESCC--CHHHHHHHHHTTCSEE-------------EE-TTSCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCcEEEEecCC--CHHHHHHHHHcCCcEE-------------EE-CCCCHHHHHHHHHHHHc
Confidence 35677777766777776666543 4555666667776644 22 34556666666666544
No 255
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=41.22 E-value=1.4e+02 Score=27.60 Aligned_cols=123 Identities=19% Similarity=0.219 Sum_probs=70.9
Q ss_pred HHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCc-EEEEecCCCCCChHHHHHHHHcCccccccccc
Q 017179 163 TNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNM-LIEALVPDFRGNNGCVREVAKSGLNVFAHNIE 241 (376)
Q Consensus 163 ~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i-~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lE 241 (376)
.+-++.+++.|++-+++ +|++. +...++++.+++. ++ .|-+..|.- +.+.++.+.+.+.+.+-. +
T Consensus 115 ~~f~~~~~~aGvdGvIi-----pDlp~---ee~~~~~~~~~~~--gl~~I~lvap~t--~~eri~~i~~~~~gfiY~-v- 180 (271)
T 3nav_A 115 DDFYQRCQKAGVDSVLI-----ADVPT---NESQPFVAAAEKF--GIQPIFIAPPTA--SDETLRAVAQLGKGYTYL-L- 180 (271)
T ss_dssp HHHHHHHHHHTCCEEEE-----TTSCG---GGCHHHHHHHHHT--TCEEEEEECTTC--CHHHHHHHHHHCCSCEEE-C-
T ss_pred HHHHHHHHHCCCCEEEE-----CCCCH---HHHHHHHHHHHHc--CCeEEEEECCCC--CHHHHHHHHHHCCCeEEE-E-
Confidence 56677888999988776 47763 3345566666654 34 355556654 567888887776443211 0
Q ss_pred chHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCC-CHHHHHHHHHHHHHcCCcEEEeecC
Q 017179 242 TVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGE-TPDQVVSTMEKVRAAGVDVMTFGQY 312 (376)
Q Consensus 242 tv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGE-T~ee~~e~L~~Lrel~vd~v~~~qY 312 (376)
+...+.-. + .....+..+.++.+++. +..-+++|||= |.+++.+.+ ..+.|.+-+|..
T Consensus 181 s~~GvTG~-~--~~~~~~~~~~v~~vr~~------~~~Pv~vGfGIst~e~~~~~~----~~gADgvIVGSA 239 (271)
T 3nav_A 181 SRAGVTGA-E--TKANMPVHALLERLQQF------DAPPALLGFGISEPAQVKQAI----EAGAAGAISGSA 239 (271)
T ss_dssp CCC-----------CCHHHHHHHHHHHHT------TCCCEEECSSCCSHHHHHHHH----HTTCSEEEESHH
T ss_pred eccCCCCc-c--cCCchhHHHHHHHHHHh------cCCCEEEECCCCCHHHHHHHH----HcCCCEEEECHH
Confidence 00011111 1 11124456778888873 24568889988 577775443 367888877733
No 256
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=41.20 E-value=54 Score=32.37 Aligned_cols=130 Identities=13% Similarity=0.156 Sum_probs=73.0
Q ss_pred HHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccc
Q 017179 163 TNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIET 242 (376)
Q Consensus 163 ~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEt 242 (376)
.+.++++.+.|++.|+|.+.... ...+.+.|+.+++.+ ++.|-+ +.. .+.+..+.+.++|+|.+-.+.+.
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~------~~~~~e~I~~ik~~~-~i~Vi~--g~V-~t~e~A~~a~~aGAD~I~vG~g~ 215 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGH------SLNIIRTLKEIKSKM-NIDVIV--GNV-VTEEATKELIENGADGIKVGIGP 215 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCS------BHHHHHHHHHHHTTC-CCEEEE--EEE-CSHHHHHHHHHTTCSEEEECC--
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC------cccHHHHHHHHHhcC-CCeEEE--eec-CCHHHHHHHHHcCCCEEEEeCCC
Confidence 56788888999999988544321 245788999998876 343321 111 15788899999999998765442
Q ss_pred hH-HHHHhhcCC-CCCHHHHHHHHHHHHHhCCCCceEEE-eEEEecCCCHHHHHHHHHHHHHcCCcEEEeecCC
Q 017179 243 VE-ELQSAVRDH-RANFKQSLDVLMMAKDYVPAGTLTKT-SIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (376)
Q Consensus 243 v~-~l~~~vr~r-~~t~e~~L~vl~~ak~~~p~Gi~tkt-~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY~ 313 (376)
-. ...+.+..- ..++.-..++.+.+++ .++++-+ +-| -+.+|+...+. +|.+.|-+|..|
T Consensus 216 Gs~~~tr~~~g~g~p~~~al~~v~~~~~~---~~IPVIA~GGI----~~~~di~kala----lGAd~V~vGt~f 278 (400)
T 3ffs_A 216 GSICTTRIVAGVGVPQITAIEKCSSVASK---FGIPIIADGGI----RYSGDIGKALA----VGASSVMIGSIL 278 (400)
T ss_dssp -------CCSCBCCCHHHHHHHHHHHHTT---TTCCEEEESCC----CSHHHHHHHHT----TTCSEEEECGGG
T ss_pred CcCcccccccccchhHHHHHHHHHHHHHh---cCCCEEecCCC----CCHHHHHHHHH----cCCCEEEEChHH
Confidence 11 111111111 1223323333333332 1344322 111 47788877664 689988887665
No 257
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=41.14 E-value=2.2e+02 Score=26.22 Aligned_cols=172 Identities=13% Similarity=0.092 Sum_probs=85.2
Q ss_pred HHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEE--ecCCCCCChHHHHHHHHcCccccccc
Q 017179 162 PTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA--LVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 162 i~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~--l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
+.+..+.+.+.|+...|+....-. ..| .+++++ .+++ .|+-.+.+ +.|+. ..+.|+.+.+.|+..+-++
T Consensus 56 ~e~l~~~m~~~GI~~~Vlvq~~~~-~~d--N~~ll~---~l~~-~~~r~~Gva~vdp~~--~~~eL~~l~~~G~rGvR~~ 126 (303)
T 4d9a_A 56 PDMLFALRDHLGFARNVIVQASCH-GTD--NAATLD---AIAR-AQGKARGIAVVDPAI--DEAELAALHEGGMRGIRFN 126 (303)
T ss_dssp HHHHHHHHHHHTCSEEEEECCGGG-TTC--CHHHHH---HHHH-TTTSEEEEECCCTTC--CHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEeccccc-ccc--HHHHHH---HHHh-CCCcEEEEEEeCCCC--CHHHHHHHHHCCCCEEEee
Confidence 344455566889988888764311 112 234444 3443 34433332 33443 5678999999998877665
Q ss_pred ccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEE--EeecCCCCCC
Q 017179 240 IETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVM--TFGQYMRPSK 317 (376)
Q Consensus 240 lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v--~~~qY~~P~~ 317 (376)
...-. +...+-.++..+++.+.+ |+.+..+ ++ .. ++.+....++++++.+| ++| .|..
T Consensus 127 ~~~~~-------~~~~~~~~~~~~~~~l~~----gl~v~l~--~~-~~---~l~~l~~~~~~~~~~iVidH~G---~p~~ 186 (303)
T 4d9a_A 127 FLKRL-------VDDAPKDKFLEVAGRLPA----GWHVVIY--FE-AD---ILEELRPFMDAIPVPIVIDHMG---RPDV 186 (303)
T ss_dssp CCTTT-------CSCCCHHHHHHHHTSCCT----TCEEEEE--CC-GG---GHHHHHHHHHHCSSCEEEGGGG---CCCG
T ss_pred cccCC-------ccccCHHHHHHHHHHHhc----CCEEEEe--cc-cc---cHHHHHHHHHHCCCcEEEeCCC---CCCc
Confidence 43210 123345555555555443 4544433 22 22 34444455555544333 333 2210
Q ss_pred CCCCCcccCChHHHHHHHHHHHHHhhhhh-ccchhHhhh-----hhhcHHHHHHHHH
Q 017179 318 RHMPVSEYITPEAFERYRALGMEMGFRYV-ASGPMVRSS-----YKAGEFYIKSMIE 368 (376)
Q Consensus 318 ~~~~v~~~v~pe~~~~l~~~a~~~gf~~~-~sgp~vrss-----y~a~~~~~~~~~~ 368 (376)
..-.....++.+.+++...+-.|+ .||. .|.+ |..-..|++.+++
T Consensus 187 -----~~g~~~~~~~~~~~l~~~~~NV~vKlSg~-~~~~~~~~~~~~~~~~~~~~~~ 237 (303)
T 4d9a_A 187 -----RQGPDGADMKAFRRLLDSREDIWFKATCP-DRLDPAGPPWDDFARSVAPLVA 237 (303)
T ss_dssp -----GGCTTSHHHHHHHHHHHHCTTEEEECCCH-HHHCTTCTTCHHHHHHHHHHHH
T ss_pred -----ccCCCCHHHHHHHHHHhhCCCEEEEeeCc-eecCCCCCCHHHHHHHHHHHHH
Confidence 000112356667777666454554 6774 4443 3333455665554
No 258
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=40.88 E-value=61 Score=29.72 Aligned_cols=162 Identities=7% Similarity=-0.047 Sum_probs=84.0
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccc
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h 238 (376)
..+|.+.|+...+.|++++++.=-+. . -.++|++|.+..+ +.+.+ -+... +. .++.+. +|++.+..
T Consensus 37 ~~dp~~~A~~~~~~Ga~~l~vvDL~~---~------n~~~i~~i~~~~~-~pv~v-gGGir-~~-~~~~~l-~Ga~~Vii 102 (260)
T 2agk_A 37 QHPSSYYAKLYKDRDVQGCHVIKLGP---N------NDDAAREALQESP-QFLQV-GGGIN-DT-NCLEWL-KWASKVIV 102 (260)
T ss_dssp CCCHHHHHHHHHHTTCTTCEEEEESS---S------CHHHHHHHHHHST-TTSEE-ESSCC-TT-THHHHT-TTCSCEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEEEeCCC---C------CHHHHHHHHhcCC-ceEEE-eCCCC-HH-HHHHHh-cCCCEEEE
Confidence 35789999999999999888853222 1 1356777776653 33333 22222 33 567777 99998876
Q ss_pred cccchHHHHHhhcCCCCCHHHHHHHHHHHH-HhCCCCceEEE----e-EEEecCCCH---HHHH-HHHHHHHHcCCcEEE
Q 017179 239 NIETVEELQSAVRDHRANFKQSLDVLMMAK-DYVPAGTLTKT----S-IMLGCGETP---DQVV-STMEKVRAAGVDVMT 308 (376)
Q Consensus 239 ~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak-~~~p~Gi~tkt----~-imvGlGET~---ee~~-e~L~~Lrel~vd~v~ 308 (376)
+-..++.- .+...+..-++++... +..-.++-++. + .+...|-.+ .+.. ++++.+.+. ++.+.
T Consensus 103 gs~a~~~~------g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~-a~~il 175 (260)
T 2agk_A 103 TSWLFTKE------GHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRKY-TNEFL 175 (260)
T ss_dssp CGGGBCTT------CCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHHTTT-CSEEE
T ss_pred CcHHHhhc------CCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHHHHh-cCEEE
Confidence 53322110 1122344444444443 21000122220 1 333334332 3556 888888889 98888
Q ss_pred eecCCCCCCCCCCCcccCChHHHHHHHHHHHHH----hhhhhccc
Q 017179 309 FGQYMRPSKRHMPVSEYITPEAFERYRALGMEM----GFRYVASG 349 (376)
Q Consensus 309 ~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~----gf~~~~sg 349 (376)
+...-+- ++. .. + .++.+++++... ....++||
T Consensus 176 ~t~i~~d---G~~-~G---~-d~eli~~l~~~~~~~~~iPVIasG 212 (260)
T 2agk_A 176 IHAADVE---GLC-GG---I-DELLVSKLFEWTKDYDDLKIVYAG 212 (260)
T ss_dssp EEC-----------CC---C-CHHHHHHHHHHHTTCSSCEEEEES
T ss_pred EEeeccc---cCc-CC---C-CHHHHHHHHHhhcccCCceEEEeC
Confidence 7532221 111 11 1 355566666655 55555655
No 259
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=40.77 E-value=2.1e+02 Score=27.25 Aligned_cols=146 Identities=11% Similarity=0.062 Sum_probs=81.5
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhC-CCcEEEEecCCCCC--ChH----HHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRG--NNG----CVREVA 229 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~-p~i~Ie~l~pd~~g--~~e----~l~~L~ 229 (376)
.++++..+.+++..+.|++.+-|=-|. + .+.=.+.|++|++.. |++.+.+ |.++ +.+ .++.|.
T Consensus 139 ~~~e~~~~~a~~~~~~G~~~~K~KvG~--~-----~~~d~~~v~avR~~~g~~~~l~v---DaN~~~~~~~A~~~~~~l~ 208 (368)
T 3q45_A 139 DEPHKMAADAVQIKKNGFEIIKVKVGG--S-----KELDVERIRMIREAAGDSITLRI---DANQGWSVETAIETLTLLE 208 (368)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCS--C-----HHHHHHHHHHHHHHHCSSSEEEE---ECTTCBCHHHHHHHHHHHG
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecC--C-----HHHHHHHHHHHHHHhCCCCeEEE---ECCCCCChHHHHHHHHHHh
Confidence 368889999999899999999886442 1 233467888888876 5665543 2222 222 334444
Q ss_pred HcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 230 KSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 230 ~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
+.|++.+ |- - +. ..+ ++.++.+++. .+++ +-.||+.....+..+.++.-.+|++.+
T Consensus 209 ~~~i~~i----Eq---P---~~--~~~----~~~~~~l~~~--~~iP------Ia~dE~~~~~~~~~~~~~~~~~d~v~~ 264 (368)
T 3q45_A 209 PYNIQHC----EE---P---VS--RNL----YTALPKIRQA--CRIP------IMADESCCNSFDAERLIQIQACDSFNL 264 (368)
T ss_dssp GGCCSCE----EC---C---BC--GGG----GGGHHHHHHT--CSSC------EEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred hcCCCEE----EC---C---CC--hhH----HHHHHHHHhh--CCCC------EEEcCCcCCHHHHHHHHHcCCCCeEEe
Confidence 4444333 31 0 11 111 2333444442 1232 233566555556566666777888876
Q ss_pred ecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhc
Q 017179 310 GQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVA 347 (376)
Q Consensus 310 ~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~ 347 (376)
- |.+-+- ..+...+..+|++.|...+.
T Consensus 265 k----~~~~GG-------it~~~~i~~~A~~~gi~~~~ 291 (368)
T 3q45_A 265 K----LSKSAG-------ITNALNIIRLAEQAHMPVQV 291 (368)
T ss_dssp C----TTTTTS-------HHHHHHHHHHHHHTTCCEEE
T ss_pred c----hhhcCC-------HHHHHHHHHHHHHcCCcEEe
Confidence 3 322211 34566777788888876653
No 260
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=40.56 E-value=46 Score=34.52 Aligned_cols=81 Identities=15% Similarity=0.163 Sum_probs=53.1
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCC-CC----cccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHH
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDD-LA----DQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK 230 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~d-l~----d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~ 230 (376)
.++.++..+.++++.+.|++++.+.++.... .+ ..+..++.+.++.|++.. ++.|- ..+.+. +.+....+.+
T Consensus 224 g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~iPvi-~~Ggi~-~~~~a~~~l~ 300 (671)
T 1ps9_A 224 GGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHV-SLPLV-TTNRIN-DPQVADDILS 300 (671)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSC-SSCEE-ECSSCC-SHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhc-CceEE-EeCCCC-CHHHHHHHHH
Confidence 3678899999999999999999998764321 11 011123567788888765 23332 233332 5677777777
Q ss_pred cC-ccccccc
Q 017179 231 SG-LNVFAHN 239 (376)
Q Consensus 231 aG-ld~i~h~ 239 (376)
.| +|.+..+
T Consensus 301 ~g~aD~V~~g 310 (671)
T 1ps9_A 301 RGDADMVSMA 310 (671)
T ss_dssp TTSCSEEEES
T ss_pred cCCCCEEEeC
Confidence 77 8887765
No 261
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=40.13 E-value=1.5e+02 Score=27.00 Aligned_cols=132 Identities=14% Similarity=0.204 Sum_probs=74.0
Q ss_pred CCchhH---HHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEE-Ee--c--CCCCCChHHHHHH
Q 017179 157 PDPDEP---TNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIE-AL--V--PDFRGNNGCVREV 228 (376)
Q Consensus 157 l~~eEi---~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie-~l--~--pd~~g~~e~l~~L 228 (376)
.+.+|+ .+.++.+.+.|++.|||=--+.+.--| .+...++++.... .+ ++.+ ++ + +| ..+.++.|
T Consensus 70 Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD--~~~~~~Li~~a~~-~~-vTFHRAFD~~~~~d---~~~ale~L 142 (224)
T 2bdq_A 70 YNDLELRIMEEDILRAVELESDALVLGILTSNNHID--TEAIEQLLPATQG-LP-LVFHMAFDVIPKSD---QKKSIDQL 142 (224)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBC--HHHHHHHHHHHTT-CC-EEECGGGGGSCTTT---HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcC--HHHHHHHHHHhCC-Ce-EEEECchhccCCcC---HHHHHHHH
Confidence 344444 456778889999999873333333334 4445555544432 11 2222 11 2 22 25678899
Q ss_pred HHcCcccc-cccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEE
Q 017179 229 AKSGLNVF-AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVM 307 (376)
Q Consensus 229 ~~aGld~i-~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v 307 (376)
.+.|++.+ .++... ..+..+-++.|+.+.+.. .| ...||.|=|-+.+.+.+. +++.+++.+
T Consensus 143 ~~lGv~rILTSG~~~-----------~~~a~~g~~~L~~Lv~~a-~~---ri~Im~GgGV~~~Ni~~l---~~~tGv~e~ 204 (224)
T 2bdq_A 143 VALGFTRILLHGSSN-----------GEPIIENIKHIKALVEYA-NN---RIEIMVGGGVTAENYQYI---CQETGVKQA 204 (224)
T ss_dssp HHTTCCEEEECSCSS-----------CCCGGGGHHHHHHHHHHH-TT---SSEEEECSSCCTTTHHHH---HHHHTCCEE
T ss_pred HHcCCCEEECCCCCC-----------CCcHHHHHHHHHHHHHhh-CC---CeEEEeCCCCCHHHHHHH---HHhhCCCEE
Confidence 99998876 232110 111333444444444422 12 346999999888887764 345689999
Q ss_pred EeecCC
Q 017179 308 TFGQYM 313 (376)
Q Consensus 308 ~~~qY~ 313 (376)
+.+...
T Consensus 205 H~s~i~ 210 (224)
T 2bdq_A 205 HGTRIT 210 (224)
T ss_dssp EETTCC
T ss_pred cccccc
Confidence 986443
No 262
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=40.04 E-value=36 Score=30.70 Aligned_cols=77 Identities=17% Similarity=0.122 Sum_probs=47.1
Q ss_pred HHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHH
Q 017179 168 AIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQ 247 (376)
Q Consensus 168 al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~ 247 (376)
..++.|..+|--=-|.-+|..+.|...+.++.+.++.... .-+++...|+ +...+.....+|+|.+... +.++
T Consensus 118 ~Aa~AGa~yISPfvgRi~d~~~dG~~~v~~i~~~~~~~~~--~t~ilaAS~R-~~~~v~~~a~~G~d~~Tip----~~vl 190 (212)
T 3r8r_A 118 LAARAGATYVSPFLGRLDDIGHNGLDLISEVKQIFDIHGL--DTQIIAASIR-HPQHVTEAALRGAHIGTMP----LKVI 190 (212)
T ss_dssp HHHHHTCSEEEEBHHHHHHTTSCHHHHHHHHHHHHHHHTC--CCEEEEBSCC-SHHHHHHHHHTTCSEEEEC----HHHH
T ss_pred HHHHcCCeEEEeccchhhhcCCChHHHHHHHHHHHHHcCC--CCEEEEecCC-CHHHHHHHHHcCCCEEEcC----HHHH
Confidence 3445688887543333344545566656666666665533 3345666776 6777777788999987553 3566
Q ss_pred Hhhc
Q 017179 248 SAVR 251 (376)
Q Consensus 248 ~~vr 251 (376)
+.+-
T Consensus 191 ~~l~ 194 (212)
T 3r8r_A 191 HALT 194 (212)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 5554
No 263
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=39.75 E-value=1e+02 Score=28.29 Aligned_cols=105 Identities=14% Similarity=0.127 Sum_probs=57.3
Q ss_pred CchhHHHHHHHHHHCCCcEEEEEeeeCCCCC----cccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCc
Q 017179 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLA----DQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGL 233 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~----d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGl 233 (376)
|++...+.++++++.|++-|.++.-....-+ ..|.+.+ ..++++++.. ++.+ ++--| +.+.++.+.+. +
T Consensus 35 ~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl-~~l~~~~~~~-Gl~~--~te~~--d~~~~~~l~~~-v 107 (262)
T 1zco_A 35 SREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKAL-RWMREAADEY-GLVT--VTEVM--DTRHVELVAKY-S 107 (262)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHH-HHHHHHHHHH-TCEE--EEECC--CGGGHHHHHHH-C
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHH-HHHHHHHHHc-CCcE--EEeeC--CHHhHHHHHhh-C
Confidence 5788899999999999988877654311111 1123333 3444444433 2332 33223 45667777777 8
Q ss_pred cccccccc-chH-HHHHhhcC---------CC-CCHHHHHHHHHHHHH
Q 017179 234 NVFAHNIE-TVE-ELQSAVRD---------HR-ANFKQSLDVLMMAKD 269 (376)
Q Consensus 234 d~i~h~lE-tv~-~l~~~vr~---------r~-~t~e~~L~vl~~ak~ 269 (376)
|.+.++-- +.+ .+.+.+.. .. .+.+++++.++.++.
T Consensus 108 d~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~~i~~ 155 (262)
T 1zco_A 108 DILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIMA 155 (262)
T ss_dssp SEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred CEEEECcccccCHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 88877632 222 34444421 11 245555555555554
No 264
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=39.63 E-value=1e+02 Score=29.69 Aligned_cols=75 Identities=13% Similarity=0.182 Sum_probs=50.6
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcC-ccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG-LNV 235 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG-ld~ 235 (376)
.+.++..+.++++.+.|+.+|.+.++.....+... .+.++.|++... +.|- ..+.+ +.+....+.+.| +|.
T Consensus 248 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~----~~~~~~v~~~~~-iPvi-~~Ggi--t~~~a~~~l~~g~aD~ 319 (364)
T 1vyr_A 248 NEEADALYLIEELAKRGIAYLHMSETDLAGGKPYS----EAFRQKVRERFH-GVII-GAGAY--TAEKAEDLIGKGLIDA 319 (364)
T ss_dssp THHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCC----HHHHHHHHHHCC-SEEE-EESSC--CHHHHHHHHHTTSCSE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEecCcccCCCccc----HHHHHHHHHHCC-CCEE-EECCc--CHHHHHHHHHCCCccE
Confidence 45677888999999999999999876432111111 345677777653 4332 34555 677788888887 888
Q ss_pred cccc
Q 017179 236 FAHN 239 (376)
Q Consensus 236 i~h~ 239 (376)
+..+
T Consensus 320 V~~g 323 (364)
T 1vyr_A 320 VAFG 323 (364)
T ss_dssp EEES
T ss_pred EEEC
Confidence 8765
No 265
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=39.44 E-value=90 Score=30.57 Aligned_cols=67 Identities=18% Similarity=0.343 Sum_probs=48.5
Q ss_pred eEEEec--CCCHHHHHHHHHHHHHcCCcEEEeecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhcc
Q 017179 280 SIMLGC--GETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVAS 348 (376)
Q Consensus 280 ~imvGl--GET~ee~~e~L~~Lrel~vd~v~~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~s 348 (376)
-+|+|- .|+.+...++.+.+++.|++.|-++-| .|...... ......+.++.|++++.+.|..++.+
T Consensus 144 ~~Iigpcsves~e~a~~~a~~~k~aGa~~vk~q~f-kprts~~~-f~gl~~egl~~L~~~~~~~Gl~~~te 212 (385)
T 3nvt_A 144 VFVFGPCSVESYEQVAAVAESIKAKGLKLIRGGAF-KPRTSPYD-FQGLGLEGLKILKRVSDEYGLGVISE 212 (385)
T ss_dssp EEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSS-CCCSSTTS-CCCCTHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEEEeCCcCCHHHHHHHHHHHHHcCCCeEEcccc-cCCCChHh-hcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 367776 689999999999999999999988555 45211110 11234578899999999999877643
No 266
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=39.41 E-value=34 Score=30.07 Aligned_cols=91 Identities=9% Similarity=0.054 Sum_probs=48.1
Q ss_pred HHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHHHhhcC----CCCCHHHHHHHHHHHHH
Q 017179 194 HFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRD----HRANFKQSLDVLMMAKD 269 (376)
Q Consensus 194 ~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~----r~~t~e~~L~vl~~ak~ 269 (376)
.+.++++.+.... +..+.+...++..-.+..+.+ +.|.|++=-.=-|..-+.+.+.- =..+.-+.|+.|..|++
T Consensus 15 ~l~~~~~~i~~e~-~~~i~i~~~~l~~~v~~a~~~-~~~~dVIISRGgta~~lr~~~~iPVV~I~~s~~Dil~al~~a~~ 92 (196)
T 2q5c_A 15 NLLNLFPKLALEK-NFIPITKTASLTRASKIAFGL-QDEVDAIISRGATSDYIKKSVSIPSISIKVTRFDTMRAVYNAKR 92 (196)
T ss_dssp HHHHHHHHHHHHH-TCEEEEEECCHHHHHHHHHHH-TTTCSEEEEEHHHHHHHHTTCSSCEEEECCCHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHhhh-CCceEEEECCHHHHHHHHHHh-cCCCeEEEECChHHHHHHHhCCCCEEEEcCCHhHHHHHHHHHHh
Confidence 4666776666543 346666666652112333444 56766652111122222222210 25788999999999998
Q ss_pred hCCCCceEEEeEEEecCCCHHHH
Q 017179 270 YVPAGTLTKTSIMLGCGETPDQV 292 (376)
Q Consensus 270 ~~p~Gi~tkt~imvGlGET~ee~ 292 (376)
... .-.+||++....++
T Consensus 93 ~~~------kIavvg~~~~~~~~ 109 (196)
T 2q5c_A 93 FGN------ELALIAYKHSIVDK 109 (196)
T ss_dssp GCS------EEEEEEESSCSSCH
T ss_pred hCC------cEEEEeCcchhhHH
Confidence 521 23456775554443
No 267
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=39.31 E-value=2e+02 Score=27.64 Aligned_cols=146 Identities=13% Similarity=0.135 Sum_probs=85.0
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhC-CCcEEEEecCCCCC--Ch----HHHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRG--NN----GCVREVA 229 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~-p~i~Ie~l~pd~~g--~~----e~l~~L~ 229 (376)
.+++++.+.++.+.+.|++.+-|=-|. + .+.-.+.|++|++.. |++.+.+ |.++ +. +.++.|.
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~iKiKvG~-----~--~~~d~~~v~avR~a~g~d~~l~v---Dan~~~~~~~A~~~~~~l~ 219 (389)
T 3ozy_A 150 LTPDQAADELAGWVEQGFTAAKLKVGR-----A--PRKDAANLRAMRQRVGADVEILV---DANQSLGRHDALAMLRILD 219 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCS-----C--HHHHHHHHHHHHHHHCTTSEEEE---ECTTCCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEeeccCC-----C--HHHHHHHHHHHHHHcCCCceEEE---ECCCCcCHHHHHHHHHHHH
Confidence 458899999999999999999885432 1 345578889998876 5665542 2211 22 2345555
Q ss_pred HcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHH-HhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEE
Q 017179 230 KSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAK-DYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMT 308 (376)
Q Consensus 230 ~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak-~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~ 308 (376)
+.|++.+ |- - +. ..+ ++.++.++ +. +++=|-.||+.....+..+.++.-.+|++.
T Consensus 220 ~~~i~~i----Eq---P---~~--~~d----~~~~~~l~~~~--------~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ 275 (389)
T 3ozy_A 220 EAGCYWF----EE---P---LS--IDD----IEGHRILRAQG--------TPVRIATGENLYTRNAFNDYIRNDAIDVLQ 275 (389)
T ss_dssp HTTCSEE----ES---C---SC--TTC----HHHHHHHHTTC--------CSSEEEECTTCCHHHHHHHHHHTTCCSEEC
T ss_pred hcCCCEE----EC---C---CC--ccc----HHHHHHHHhcC--------CCCCEEeCCCCCCHHHHHHHHHcCCCCEEE
Confidence 5555443 21 0 11 223 33445555 41 122333467776766766777777788876
Q ss_pred eecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhc
Q 017179 309 FGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVA 347 (376)
Q Consensus 309 ~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~ 347 (376)
+- +.+-+- ..+...+..+|...|...+.
T Consensus 276 ik----~~~~GG-------it~~~~ia~~A~~~gi~~~~ 303 (389)
T 3ozy_A 276 AD----ASRAGG-------ITEALAISASAASAHLAWNP 303 (389)
T ss_dssp CC----TTTSSC-------HHHHHHHHHHHHHTTCEECC
T ss_pred eC----ccccCC-------HHHHHHHHHHHHHcCCEEEe
Confidence 63 322111 34566677777777765543
No 268
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=39.15 E-value=2e+02 Score=28.79 Aligned_cols=68 Identities=13% Similarity=0.179 Sum_probs=42.3
Q ss_pred CCchhHHHHHHHHHHCCC---------cEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGL---------DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVRE 227 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~---------~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~ 227 (376)
++.+++...++.+.++-. +-|.|.... .| .+.+..+|+.+.+.. ++.+.+-+. +.+.++.
T Consensus 102 ~~e~~~~~~~~~~~~~~~~rvg~~~~~D~ial~~~s----~d--pe~~~~vVk~V~e~~-dvPL~IDS~----dpevlea 170 (446)
T 4djd_C 102 LSSEELKAKVEAINGLNFDRVGQHYTIQAIAIRHDA----DD--PAAFKAAVASVAAAT-QLNLVLMAD----DPDVLKE 170 (446)
T ss_dssp SCHHHHHHHHHHHTTCCEEETTEEECCCEEEEECCS----SS--THHHHHHHHHHHTTC-CSEEEEECS----CHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhccCcEEEEEeCC----CC--HHHHHHHHHHHHHhC-CCCEEEecC----CHHHHHH
Confidence 456778888887765433 333332110 11 567999999998754 455555443 6788888
Q ss_pred HHHcCccc
Q 017179 228 VAKSGLNV 235 (376)
Q Consensus 228 L~~aGld~ 235 (376)
..+++.+.
T Consensus 171 ALea~a~~ 178 (446)
T 4djd_C 171 ALAGVADR 178 (446)
T ss_dssp HHGGGGGG
T ss_pred HHHhhcCc
Confidence 87776553
No 269
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=38.94 E-value=1.6e+02 Score=27.43 Aligned_cols=97 Identities=15% Similarity=0.113 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHhCC-------CC--ceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecCC--CCCCCCCCC---
Q 017179 257 FKQSLDVLMMAKDYVP-------AG--TLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYM--RPSKRHMPV--- 322 (376)
Q Consensus 257 ~e~~L~vl~~ak~~~p-------~G--i~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY~--~P~~~~~~v--- 322 (376)
.+...++++.+++..+ .+ +.+|. ..+.+++|..+..+.+.+.|+|.|.+.+-. +......+.
T Consensus 187 ~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi----~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~ 262 (336)
T 1f76_A 187 GEALDDLLTAIKNKQNDLQAMHHKYVPIAVKI----APDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQ 262 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCCCEEEEC----CSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTC
T ss_pred HHHHHHHHHHHHHHHHhhhhcccccCceEEEe----cCCCCHHHHHHHHHHHHHcCCcEEEEeCCccccccccccccccc
Confidence 5556677777766431 11 23342 235788899999999999999999886432 110000000
Q ss_pred ----cc-cCChHHHHHHHHHHHHH--hhhhhccchhHhhhhhh
Q 017179 323 ----SE-YITPEAFERYRALGMEM--GFRYVASGPMVRSSYKA 358 (376)
Q Consensus 323 ----~~-~v~pe~~~~l~~~a~~~--gf~~~~sgp~vrssy~a 358 (376)
.. .+.|...+.++++.... ....+++| =+++--.|
T Consensus 263 ~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~G-GI~~~~da 304 (336)
T 1f76_A 263 TGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVG-GIDSVIAA 304 (336)
T ss_dssp SSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEES-SCCSHHHH
T ss_pred CCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEEC-CCCCHHHH
Confidence 00 01233446666666666 45666666 45544333
No 270
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=38.84 E-value=1.3e+02 Score=29.07 Aligned_cols=75 Identities=9% Similarity=0.151 Sum_probs=44.1
Q ss_pred CchhHHHHHHHHHHCCCcEEEEEeeeCCC----CCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCc
Q 017179 158 DPDEPTNVAEAIASWGLDYVVITSVDRDD----LADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGL 233 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~eIvLTsg~r~d----l~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGl 233 (376)
+.+...+.|+++++.|.+.+.++.-..+. +...|.+.+ +.++++++.. ++.+ ++--| +.+.++.+.+. +
T Consensus 118 s~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl-~~l~~~~~e~-Gl~~--~te~~--d~~~~~~l~~~-v 190 (350)
T 1vr6_A 118 GREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGL-EYLREAADKY-GMYV--VTEAL--GEDDLPKVAEY-A 190 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHH-HHHHHHHHHH-TCEE--EEECS--SGGGHHHHHHH-C
T ss_pred CHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHH-HHHHHHHHHc-CCcE--EEEeC--CHHHHHHHHHh-C
Confidence 57889999999999999987654332111 111133333 4444444433 2333 33333 56677777777 8
Q ss_pred cccccc
Q 017179 234 NVFAHN 239 (376)
Q Consensus 234 d~i~h~ 239 (376)
|.+.++
T Consensus 191 d~lkIg 196 (350)
T 1vr6_A 191 DIIQIG 196 (350)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 888775
No 271
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=38.80 E-value=1.1e+02 Score=24.31 Aligned_cols=39 Identities=13% Similarity=0.169 Sum_probs=28.5
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++.|++..|.+.|-+++... +.+.+....++|++.|
T Consensus 99 ~~~~~~lr~~~~~~~ii~ls~~~--~~~~~~~~~~~g~~~~ 137 (157)
T 3hzh_A 99 ITCLSNIMEFDKNARVIMISALG--KEQLVKDCLIKGAKTF 137 (157)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCC--CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhhCCCCcEEEEeccC--cHHHHHHHHHcCCCEE
Confidence 46778888877888776677654 5677777888887754
No 272
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=38.70 E-value=1.3e+02 Score=27.13 Aligned_cols=141 Identities=13% Similarity=0.190 Sum_probs=77.4
Q ss_pred HHHHHHHHCCCcEEEEEeeeCCCCCcccHH----HHHHHHHHHHhhCCCcEEEEecCCC-CCChHHHHHHHHcCcccccc
Q 017179 164 NVAEAIASWGLDYVVITSVDRDDLADQGSG----HFAQTVRKLKELKPNMLIEALVPDF-RGNNGCVREVAKSGLNVFAH 238 (376)
Q Consensus 164 ~~a~al~~~G~~eIvLTsg~r~dl~d~g~~----~~~elvr~Ik~~~p~i~Ie~l~pd~-~g~~e~l~~L~~aGld~i~h 238 (376)
+.++++.+.| .+|-.=|-.++++.....+ .+.+..+.|.+.. +..+..+-|-+ .-+...++.+++.|...+.-
T Consensus 89 ~~lr~i~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~-G~~~~~fr~P~G~~~~~~~~~l~~~G~~~v~w 166 (254)
T 2iw0_A 89 DTIRRMRADG-HLVGSHTYAHPDLNTLSSADRISQMRQLEEATRRID-GFAPKYMRAPYLSCDAGCQGDLGGLGYHIIDT 166 (254)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHH-SCEESEECCGGGCCCHHHHHHHHHTTCEEECC
T ss_pred HHHHHHHHCC-CEEEeeccCCCCcccCCHHHHHHHHHHHHHHHHHHh-CCCCCEEECCCCCCCHHHHHHHHHcCCeEEEe
Confidence 4566777788 4664444445555432222 2333334454433 33444443322 22788899999999888777
Q ss_pred cccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-C--CCHHH-HHHHHHHHHHcCCcEEEeecCC
Q 017179 239 NIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-G--ETPDQ-VVSTMEKVRAAGVDVMTFGQYM 313 (376)
Q Consensus 239 ~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-G--ET~ee-~~e~L~~Lrel~vd~v~~~qY~ 313 (376)
++++.+-.. . ......+.++.++.+.+.. ..-.-.||+-+ + .|.++ +-+.++.|++.|..++++.+.+
T Consensus 167 ~~d~~Dw~~---~-~~~~i~~~~~~~~~~~~~~---~~~~g~IiL~Hd~~~~t~~~~l~~ii~~lk~~Gy~fvtl~ell 238 (254)
T 2iw0_A 167 NLDTKDYEN---N-KPETTHLSAEKFNNELSAD---VGANSYIVLSHDVHEQTVVSLTQKLIDTLKSKGYRAVTVGECL 238 (254)
T ss_dssp SEECCTTTS---C-STTTHHHHHHHHHHHSCSC---GGGCCEEEEECTTSHHHHHTHHHHHHHHHHHTTCEECCHHHHT
T ss_pred CCCCcccCc---C-ChHHHHHHHHHHHHHHhhc---CCCCCEEEEEcCCCcccHHHHHHHHHHHHHHCCCEEEEHHHhh
Confidence 777655211 1 1122333334443322210 00123567766 3 24444 4578999999999999998776
No 273
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=38.61 E-value=78 Score=29.32 Aligned_cols=81 Identities=11% Similarity=0.050 Sum_probs=52.6
Q ss_pred CCchhHHHHHHHHHHCC-CcEEEEEeeeC-----C---C---CC----cc---c---HHHHHHHHHHHHhhCCCcEEEEe
Q 017179 157 PDPDEPTNVAEAIASWG-LDYVVITSVDR-----D---D---LA----DQ---G---SGHFAQTVRKLKELKPNMLIEAL 214 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G-~~eIvLTsg~r-----~---d---l~----d~---g---~~~~~elvr~Ik~~~p~i~Ie~l 214 (376)
++.+++.+.++.+.+.| ++.|++++... + . +. .+ | .....+.++++++..|++.|-..
T Consensus 171 ~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~ 250 (314)
T 2e6f_A 171 FDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGC 250 (314)
T ss_dssp CCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEE
Confidence 56778888899999999 99998876330 0 0 10 01 1 12345788888887666666433
Q ss_pred cCCCCCChHHHHHHHHcCccccccc
Q 017179 215 VPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 215 ~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
+... +.+.+.++..+|+|.+..+
T Consensus 251 -GGI~-~~~da~~~l~~GAd~V~ig 273 (314)
T 2e6f_A 251 -GGVY-SGEDAFLHILAGASMVQVG 273 (314)
T ss_dssp -SSCC-SHHHHHHHHHHTCSSEEEC
T ss_pred -CCCC-CHHHHHHHHHcCCCEEEEc
Confidence 3332 5666666668899988664
No 274
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=38.54 E-value=2.9e+02 Score=27.79 Aligned_cols=126 Identities=11% Similarity=0.155 Sum_probs=73.1
Q ss_pred hHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhC------CCcEEEEecCCCCCChHHHHHHHHcCcc
Q 017179 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK------PNMLIEALVPDFRGNNGCVREVAKSGLN 234 (376)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~------p~i~Ie~l~pd~~g~~e~l~~L~~aGld 234 (376)
.+.+..+.+.+.++..+.++-- +.- -.|.-...++++.+.... ..+.+.+-.+......+.++.|.++|+|
T Consensus 194 ~l~eal~~m~~~~i~~lpVVDe--~g~-l~GiIT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~era~aLveaGvd 270 (511)
T 3usb_A 194 TLSEAEKILQKYKIEKLPLVDN--NGV-LQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTRIDALVKASVD 270 (511)
T ss_dssp CHHHHHHHHHHHTCSEEEEECT--TSB-EEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHcCCCEEEEEeC--CCC-EeeeccHHHHHHhhhcccchhhhccceeeeeeeeeccchHHHHHHHHhhccc
Confidence 3455556677788888877621 110 123334566777765411 1233333222221135778889999999
Q ss_pred cccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 235 VFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 235 ~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
.+..+.. .......++.++.+++.+|. +.+- +|---|.++ .+.+.+.|+|.|.++
T Consensus 271 ~I~Id~a------------~g~~~~v~~~i~~i~~~~~~-~~vi----~g~v~t~e~----a~~~~~aGad~i~vg 325 (511)
T 3usb_A 271 AIVLDTA------------HGHSQGVIDKVKEVRAKYPS-LNII----AGNVATAEA----TKALIEAGANVVKVG 325 (511)
T ss_dssp EEEEECS------------CTTSHHHHHHHHHHHHHCTT-SEEE----EEEECSHHH----HHHHHHHTCSEEEEC
T ss_pred eEEeccc------------ccchhhhhhHHHHHHHhCCC-ceEE----eeeeccHHH----HHHHHHhCCCEEEEC
Confidence 8766411 12346778899999998764 4433 222235544 456677899999875
No 275
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=38.23 E-value=1.5e+02 Score=27.39 Aligned_cols=71 Identities=17% Similarity=0.223 Sum_probs=43.0
Q ss_pred HHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEec-C---CCCCC-------hHHHHHHHHcC
Q 017179 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALV-P---DFRGN-------NGCVREVAKSG 232 (376)
Q Consensus 164 ~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~-p---d~~g~-------~e~l~~L~~aG 232 (376)
+-+.++.+.|.+.|-|-+. +..||...=..+++.+++.. ++.|.+++ | ||.-+ .+.++.++++|
T Consensus 12 ~~a~~A~~~GAdRIELc~~----L~~GGlTPS~g~i~~~~~~~-~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~G 86 (256)
T 1twd_A 12 ECALTAQQNGADRVELCAA----PKEGGLTPSLGVLKSVRQRV-TIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELG 86 (256)
T ss_dssp HHHHHHHHTTCSEEEECBC----GGGTCBCCCHHHHHHHHHHC-CSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEEcCC----cccCCCCCCHHHHHHHHHHc-CCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcC
Confidence 3455677889999988764 22233111134556666554 47777665 3 56544 34567788889
Q ss_pred ccccccc
Q 017179 233 LNVFAHN 239 (376)
Q Consensus 233 ld~i~h~ 239 (376)
+|.+-.+
T Consensus 87 adGvV~G 93 (256)
T 1twd_A 87 FPGLVTG 93 (256)
T ss_dssp CSEEEEC
T ss_pred CCEEEEe
Confidence 8877555
No 276
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=38.23 E-value=1.2e+02 Score=29.20 Aligned_cols=116 Identities=10% Similarity=0.009 Sum_probs=61.7
Q ss_pred CcccHHHHHHHHHHHHhhCCCcEEEEe-cCC-CCCChHHHHHHH---HcCcccccccccchHHHHHhhcCCCCCHHHHHH
Q 017179 188 ADQGSGHFAQTVRKLKELKPNMLIEAL-VPD-FRGNNGCVREVA---KSGLNVFAHNIETVEELQSAVRDHRANFKQSLD 262 (376)
Q Consensus 188 ~d~g~~~~~elvr~Ik~~~p~i~Ie~l-~pd-~~g~~e~l~~L~---~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~ 262 (376)
...|.+.|++.++.+++ .++..|-+. .+. ...-.+.++.+. ++|.|.+..|+-.-+. +--+.-..+.+...+
T Consensus 107 ~n~G~~~~~~~l~~~~~-~~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~--~gg~~l~~~~e~~~~ 183 (354)
T 4ef8_A 107 PNNGFDFYLAYAAEQHD-YGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNV--PGKPQVAYDFDAMRQ 183 (354)
T ss_dssp CBCCHHHHHHHHHHTCC-TTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCS--TTSCCGGGSHHHHHH
T ss_pred CCcCHHHHHHHHHHHhh-cCCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCC--CCchhhccCHHHHHH
Confidence 33456777766665542 222222221 111 000123344444 4577777777653110 000101235677778
Q ss_pred HHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcC-CcEEEee
Q 017179 263 VLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAG-VDVMTFG 310 (376)
Q Consensus 263 vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~-vd~v~~~ 310 (376)
+++.+++....-+.+|... +.+++++.+.++.+.+.+ +|.|++.
T Consensus 184 il~av~~~~~~PV~vKi~p----~~d~~~~~~~a~~~~~~Gg~d~I~~~ 228 (354)
T 4ef8_A 184 CLTAVSEVYPHSFGVKMPP----YFDFAHFDAAAEILNEFPKVQFITCI 228 (354)
T ss_dssp HHHHHHHHCCSCEEEEECC----CCSHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred HHHHHHHhhCCCeEEEecC----CCCHHHHHHHHHHHHhCCCccEEEEe
Confidence 8888877532113344432 447889999999999998 9988763
No 277
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=38.22 E-value=1.1e+02 Score=28.55 Aligned_cols=75 Identities=9% Similarity=0.121 Sum_probs=43.7
Q ss_pred CchhHHHHHHHHHHCCCcEEEEEeeeCCC----CCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCc
Q 017179 158 DPDEPTNVAEAIASWGLDYVVITSVDRDD----LADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGL 233 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~eIvLTsg~r~d----l~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGl 233 (376)
+.+...+.|+++++.|.+.+.++.=..+. +...|.+.+ +.++++++.. ++.+ ++--| +.+.++.+.+. +
T Consensus 50 ~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl-~~l~~~~~~~-Gl~~--~te~~--d~~~~~~l~~~-v 122 (276)
T 1vs1_A 50 SWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGL-KLLRRAGDEA-GLPV--VTEVL--DPRHVETVSRY-A 122 (276)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHH-HHHHHHHHHH-TCCE--EEECC--CGGGHHHHHHH-C
T ss_pred CHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHH-HHHHHHHHHc-CCcE--EEecC--CHHHHHHHHHh-C
Confidence 57888999999999999987654332111 111133333 4444444433 2322 33223 56667777777 7
Q ss_pred cccccc
Q 017179 234 NVFAHN 239 (376)
Q Consensus 234 d~i~h~ 239 (376)
|.+.++
T Consensus 123 d~~kIg 128 (276)
T 1vs1_A 123 DMLQIG 128 (276)
T ss_dssp SEEEEC
T ss_pred CeEEEC
Confidence 888775
No 278
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=38.03 E-value=1.3e+02 Score=26.92 Aligned_cols=112 Identities=13% Similarity=0.112 Sum_probs=65.4
Q ss_pred HHHHHHHHHCCC-cEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEec-CCCCCC-hHHHHHHHHcCccccccc
Q 017179 163 TNVAEAIASWGL-DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALV-PDFRGN-NGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 163 ~~~a~al~~~G~-~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~-pd~~g~-~e~l~~L~~aGld~i~h~ 239 (376)
..+++.+.+.|+ +.++|+|-+ .+.++.+++..|.+.+..+. .....+ .+.+..+...|++.+..+
T Consensus 129 ~~v~~~l~~~~~~~~v~i~Sf~------------~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~ 196 (258)
T 2o55_A 129 QRLLLLVEKYHMQERVDYCSFH------------HEALAHLKALCPDVKITYLFNYMGQPTPLDFVEQACYGDANGVSML 196 (258)
T ss_dssp HHHHHHHHTTTCGGGEEEEESS------------HHHHHHHHHHCTTCEEEEECCTTSCCCCTTHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHcCCCCCEEEEeCC------------HHHHHHHHHHCCCCcEEEEEeCCCCCCHHHHHHHHHhcCCeEEecC
Confidence 455666777776 678887742 24577788888998887776 322111 223333556677665443
Q ss_pred ccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 240 IETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 240 lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
... +. -+.++.+++ .|+.+...-+-++..+.++ ++.+.+.|+|.|.-
T Consensus 197 ~~~-------~~---------~~~v~~~~~---~G~~v~~wTv~~~~n~~~~----~~~l~~~GvdgI~T 243 (258)
T 2o55_A 197 FHY-------LT---------KEQVCTAHE---KGLSVTVWMPWIFDDSEED----WKKCLELQVDLICS 243 (258)
T ss_dssp GGG-------CC---------HHHHHHHHH---TTCEEEEECCTTCCCCHHH----HHHHHHHTCSEEEE
T ss_pred hhh-------cC---------HHHHHHHHH---CCCEEEEeeCCCCCCCHHH----HHHHHHcCCCEEEe
Confidence 211 11 256777787 4777665554233344443 45567789998753
No 279
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=37.93 E-value=59 Score=29.83 Aligned_cols=69 Identities=16% Similarity=0.161 Sum_probs=41.1
Q ss_pred HH-HHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCC---CcEEEEecCCCCCChHHHHHHHHc--Cccc
Q 017179 162 PT-NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP---NMLIEALVPDFRGNNGCVREVAKS--GLNV 235 (376)
Q Consensus 162 i~-~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p---~i~Ie~l~pd~~g~~e~l~~L~~a--Gld~ 235 (376)
+. +.++.+.++ +.++++|+.+++.... |.+ .+++++|++..| .+.|-+. ++.. +.+.+..+.+. |++.
T Consensus 159 ~~~e~a~~~~~~-a~~il~t~i~~dG~~~-G~d--~eli~~l~~~~~~~~~iPVIas-GGi~-s~ed~~~l~~~~~G~~g 232 (260)
T 2agk_A 159 LNADTFRELRKY-TNEFLIHAADVEGLCG-GID--ELLVSKLFEWTKDYDDLKIVYA-GGAK-SVDDLKLVDELSHGKVD 232 (260)
T ss_dssp ESHHHHHHHTTT-CSEEEEEC-------C-CCC--HHHHHHHHHHHTTCSSCEEEEE-SCCC-CTHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHh-cCEEEEEeeccccCcC-CCC--HHHHHHHHHhhcccCCceEEEe-CCCC-CHHHHHHHHHhcCCCCE
Confidence 44 667788889 9999999998765432 221 467788877653 4555433 3332 67788888876 7765
Q ss_pred c
Q 017179 236 F 236 (376)
Q Consensus 236 i 236 (376)
+
T Consensus 233 v 233 (260)
T 2agk_A 233 L 233 (260)
T ss_dssp E
T ss_pred E
Confidence 4
No 280
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=37.87 E-value=2.4e+02 Score=25.72 Aligned_cols=46 Identities=15% Similarity=0.141 Sum_probs=30.1
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCC-Ccc-cHHHHHHHHHHHHhhC
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDL-ADQ-GSGHFAQTVRKLKELK 206 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl-~d~-g~~~~~elvr~Ik~~~ 206 (376)
.+.+|+...++.+...|.+-|-+= -|+ .+. ..+.+.+.+..|++..
T Consensus 29 ~~~~e~~~~~~~~~~~~~D~vElR----vD~l~~~~~~~~v~~~l~~lr~~~ 76 (257)
T 2yr1_A 29 EDDRKVLREAEEVCRKQPDLLEWR----ADFFRAIDDQERVLATANGLRNIA 76 (257)
T ss_dssp SSHHHHHHHHHHHHHSCCSEEEEE----GGGCTTTTCHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHhhcCCCEEEEE----eecccccCcHHHHHHHHHHHHHhc
Confidence 457888888888888887665542 222 211 1456777888887764
No 281
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=37.57 E-value=1.9e+02 Score=24.63 Aligned_cols=74 Identities=11% Similarity=0.146 Sum_probs=46.4
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeee-CCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccc
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVD-RDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFA 237 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~-r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~ 237 (376)
++++.+.++.+.+.|+++|.+.-|- ....... -.+.+++|++..+++.|.+ .+.. +.+.+..+.++|+|.+-
T Consensus 113 ~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~----~~~~i~~l~~~~~~~~i~~-~gGI--~~~~~~~~~~~Gad~vv 185 (211)
T 3f4w_A 113 VDDLPARVRLLEEAGADMLAVHTGTDQQAAGRK----PIDDLITMLKVRRKARIAV-AGGI--SSQTVKDYALLGPDVVI 185 (211)
T ss_dssp CSSHHHHHHHHHHHTCCEEEEECCHHHHHTTCC----SHHHHHHHHHHCSSCEEEE-ESSC--CTTTHHHHHTTCCSEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEEcCCCcccccCCC----CHHHHHHHHHHcCCCcEEE-ECCC--CHHHHHHHHHcCCCEEE
Confidence 3456777888889999987654220 0000000 1467788887766666654 3333 46778889999999876
Q ss_pred cc
Q 017179 238 HN 239 (376)
Q Consensus 238 h~ 239 (376)
.+
T Consensus 186 vG 187 (211)
T 3f4w_A 186 VG 187 (211)
T ss_dssp EC
T ss_pred EC
Confidence 54
No 282
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=37.55 E-value=1e+02 Score=29.52 Aligned_cols=62 Identities=15% Similarity=0.200 Sum_probs=42.2
Q ss_pred HHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 164 ~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
+.++++.+.|++.|.|-. . + .+.+.+.++.++ +++.|+++- .. +++.+..+.+.|+|.+..+
T Consensus 242 dea~eAl~aGaD~I~LDn-----~-~--~~~l~~av~~l~---~~v~ieaSG-GI--t~~~I~~~a~tGVD~isvG 303 (320)
T 3paj_A 242 AELEEAISAGADIIMLDN-----F-S--LEMMREAVKINA---GRAALENSG-NI--TLDNLKECAETGVDYISVG 303 (320)
T ss_dssp HHHHHHHHTTCSEEEEES-----C-C--HHHHHHHHHHHT---TSSEEEEES-SC--CHHHHHHHHTTTCSEEECT
T ss_pred HHHHHHHHcCCCEEEECC-----C-C--HHHHHHHHHHhC---CCCeEEEEC-CC--CHHHHHHHHHcCCCEEEEC
Confidence 445555667998888732 1 1 344666665554 567887544 44 7899999999999998664
No 283
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=37.44 E-value=3.5e+02 Score=27.66 Aligned_cols=87 Identities=15% Similarity=0.308 Sum_probs=52.7
Q ss_pred HHHHHHHcCccccccccc---chHHHH-HhhcCC----CCCHHH----HHHHHHHHHHhCCCCceE--EEeEE--EecCC
Q 017179 224 CVREVAKSGLNVFAHNIE---TVEELQ-SAVRDH----RANFKQ----SLDVLMMAKDYVPAGTLT--KTSIM--LGCGE 287 (376)
Q Consensus 224 ~l~~L~~aGld~i~h~lE---tv~~l~-~~vr~r----~~t~e~----~L~vl~~ak~~~p~Gi~t--kt~im--vGlGE 287 (376)
..+..+++|.|.+..+.- ..+..+ +..+.| +.+.+. .+++++.+++..+..+.+ +-+.- +--|.
T Consensus 146 aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~ 225 (671)
T 1ps9_A 146 CAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGG 225 (671)
T ss_dssp HHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCC
T ss_pred HHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCC
Confidence 455667889888765421 112222 111211 233444 478888888865433332 33321 11278
Q ss_pred CHHHHHHHHHHHHHcCCcEEEee
Q 017179 288 TPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 288 T~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
+.++..+.++.|.+.++|+++++
T Consensus 226 ~~~~~~~~a~~l~~~g~d~i~v~ 248 (671)
T 1ps9_A 226 TFAETVELAQAIEAAGATIINTG 248 (671)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEcC
Confidence 99999999999999999999886
No 284
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=37.37 E-value=2.7e+02 Score=26.35 Aligned_cols=147 Identities=14% Similarity=0.027 Sum_probs=81.3
Q ss_pred CchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhC-CCcEEEEecCCCCC--ChHHHHHHHHcCcc
Q 017179 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRG--NNGCVREVAKSGLN 234 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~-p~i~Ie~l~pd~~g--~~e~l~~L~~aGld 234 (376)
++++..+.++.+.+.|++.|-|-.|. + .+.-.+.|++|++.. |++.|.+ |.++ +.+....+.+. ++
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~g~-----~--~~~~~e~v~avr~a~g~d~~l~v---Dan~~~~~~~a~~~~~~-l~ 213 (379)
T 2rdx_A 145 SEAETRAELARHRAAGYRQFQIKVGA-----D--WQSDIDRIRACLPLLEPGEKAMA---DANQGWRVDNAIRLARA-TR 213 (379)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCS-----C--HHHHHHHHHHHGGGSCTTCEEEE---ECTTCSCHHHHHHHHHH-TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccC-----C--HHHHHHHHHHHHHhcCCCCEEEE---ECCCCCCHHHHHHHHHH-HH
Confidence 57888899999999999999886553 1 345678999999877 4666543 2211 33322222221 22
Q ss_pred cccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecCCC
Q 017179 235 VFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYMR 314 (376)
Q Consensus 235 ~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY~~ 314 (376)
-++..+|- +-. .++.++.+++.. +++ |+ .+|+.....+..+.+++-.+|+|.+-
T Consensus 214 ~~~i~iE~----------P~~----~~~~~~~l~~~~--~iP----I~--~de~i~~~~~~~~~i~~~~~d~v~ik---- 267 (379)
T 2rdx_A 214 DLDYILEQ----------PCR----SYEECQQVRRVA--DQP----MK--LDECVTGLHMAQRIVADRGAEICCLK---- 267 (379)
T ss_dssp TSCCEEEC----------CSS----SHHHHHHHHTTC--CSC----EE--ECTTCCSHHHHHHHHHHTCCSEEEEE----
T ss_pred hCCeEEeC----------CcC----CHHHHHHHHhhC--CCC----EE--EeCCcCCHHHHHHHHHcCCCCEEEEe----
Confidence 12112331 111 245555555521 122 22 24444444445555667778888774
Q ss_pred CCCCCCCCcccCChHHHHHHHHHHHHHhhhhhcc
Q 017179 315 PSKRHMPVSEYITPEAFERYRALGMEMGFRYVAS 348 (376)
Q Consensus 315 P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~s 348 (376)
|.+-+- ..+...+..+|++.|...+.+
T Consensus 268 ~~~~GG-------it~~~~i~~~A~~~g~~~~~~ 294 (379)
T 2rdx_A 268 ISNLGG-------LSKARRTRDFLIDNRMPVVAE 294 (379)
T ss_dssp TTTTTS-------HHHHHHHHHHHHHTTCCEEEE
T ss_pred ccccCC-------HHHHHHHHHHHHHcCCeEEEe
Confidence 322222 446667777777777765544
No 285
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=37.23 E-value=2.1e+02 Score=25.65 Aligned_cols=135 Identities=9% Similarity=0.030 Sum_probs=77.1
Q ss_pred HHHHHHHCCCcEEEEEeeeC--CCCCcccHH----HHHHHHHHHHhhCCCcEEEEe-cCC--CCCChHHHHHHHHcCccc
Q 017179 165 VAEAIASWGLDYVVITSVDR--DDLADQGSG----HFAQTVRKLKELKPNMLIEAL-VPD--FRGNNGCVREVAKSGLNV 235 (376)
Q Consensus 165 ~a~al~~~G~~eIvLTsg~r--~dl~d~g~~----~~~elvr~Ik~~~p~i~Ie~l-~pd--~~g~~e~l~~L~~aGld~ 235 (376)
.++++.+.| .+|-.=|-.+ .++.....+ .+.+..+.|++.. +.....+ .|- -.-+.+.++.+++.|...
T Consensus 72 ~~~~i~~~G-heIg~Ht~~H~~~~l~~ls~~~~~~ei~~~~~~l~~~~-G~~~~~fr~P~~~G~~~~~~~~~l~~~G~~~ 149 (254)
T 2vyo_A 72 LYRRAVEEG-HNVALRVDPSMDEGYQCLSQDALENNVDREIDTIDGLS-GTEIRYAAVPICNGQVNSEMYNILTERGVLP 149 (254)
T ss_dssp HHHHHHHTT-CEEEEECCGGGTTCGGGSCHHHHHHHHHHHHHHHHHHH-TSCCCEEECCCBTTEECHHHHHHHHTTTCEE
T ss_pred HHHHHHhCC-CEEEecCCCCCCcCcccCCHHHHHHHHHHHHHHHHHHH-CCCCeEEeCCccCCCCCHHHHHHHHHCCCEE
Confidence 566777888 5665555556 555432222 3333444454432 1222222 222 112788899999999888
Q ss_pred ccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-C--CCHHHHHHHHHHHHHcCCcEEEeec-
Q 017179 236 FAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-G--ETPDQVVSTMEKVRAAGVDVMTFGQ- 311 (376)
Q Consensus 236 i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-G--ET~ee~~e~L~~Lrel~vd~v~~~q- 311 (376)
+.-++++.+-..+ +. +++.+.+..... ..-.|++-+ + .|.+.+.+.++.|++.|+.++++.+
T Consensus 150 v~w~vd~~Dw~~~-------~~-----~~~~v~~~~~~~--~~g~IiL~Hd~~~~t~~aL~~ii~~l~~~Gy~fvtl~e~ 215 (254)
T 2vyo_A 150 VGYTFCPYDYDDP-------VG-----EFESMIEGSDPK--HHSFIILMHDGQEADTSRLENMVKIGKDKGYRFVNMDEC 215 (254)
T ss_dssp CCCSBCGGGSSSH-------HH-----HHHHHHHTSCTT--TCCEEEEEEGGGGSSCHHHHHHHHHHHHHTCEECCHHHH
T ss_pred EEeccCCcccccc-------hH-----HHHHHHHhcccc--CCCcEEEEeCCchhHHHHHHHHHHHHHHCCCEEEEchHh
Confidence 8777776551100 01 333333311110 012455555 3 6788899999999999999999988
Q ss_pred CCCC
Q 017179 312 YMRP 315 (376)
Q Consensus 312 Y~~P 315 (376)
...+
T Consensus 216 l~~~ 219 (254)
T 2vyo_A 216 LQGY 219 (254)
T ss_dssp TTTC
T ss_pred hhcc
Confidence 6654
No 286
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=37.12 E-value=1.2e+02 Score=23.55 Aligned_cols=58 Identities=17% Similarity=0.231 Sum_probs=38.6
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHH
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD 269 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~ 269 (376)
.++++.|++..|.+.|-++++.- +.+.+....++|++.| +. +..+.++.+..|+.+.+
T Consensus 83 ~~~~~~l~~~~~~~~ii~lt~~~--~~~~~~~~~~~ga~~~-------------l~-Kp~~~~~L~~~i~~~~~ 140 (146)
T 4dad_A 83 LAAIEKLSRLHPGLTCLLVTTDA--SSQTLLDAMRAGVRDV-------------LR-WPLEPRALDDALKRAAA 140 (146)
T ss_dssp HHHHHHHHHHCTTCEEEEEESCC--CHHHHHHHHTTTEEEE-------------EE-SSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcEEEEeCCC--CHHHHHHHHHhCCcee-------------Ec-CCCCHHHHHHHHHHHHh
Confidence 56788888888888887777654 5666777778887654 22 23556666666666554
No 287
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=36.58 E-value=77 Score=30.74 Aligned_cols=88 Identities=8% Similarity=0.196 Sum_probs=50.5
Q ss_pred HHHHHHHcCccccccccc---chHHHHH-hhcCC----CCCHHH----HHHHHHHHHHhCCCC-ceEEEeE---EEe--c
Q 017179 224 CVREVAKSGLNVFAHNIE---TVEELQS-AVRDH----RANFKQ----SLDVLMMAKDYVPAG-TLTKTSI---MLG--C 285 (376)
Q Consensus 224 ~l~~L~~aGld~i~h~lE---tv~~l~~-~vr~r----~~t~e~----~L~vl~~ak~~~p~G-i~tkt~i---mvG--l 285 (376)
..+..+++|.|.+.++.- ..+..+. ..+.| +.+.+. .+++++.+++..+.. +.++.+. .-| -
T Consensus 171 aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~ 250 (377)
T 2r14_A 171 AAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTD 250 (377)
T ss_dssp HHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCC
T ss_pred HHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCC
Confidence 445556788888766531 1122221 11111 223333 467778887765421 2233221 111 1
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEeec
Q 017179 286 GETPDQVVSTMEKVRAAGVDVMTFGQ 311 (376)
Q Consensus 286 GET~ee~~e~L~~Lrel~vd~v~~~q 311 (376)
|.+.++..+.++.|.+.++|++++..
T Consensus 251 ~~~~~~~~~la~~le~~Gvd~i~v~~ 276 (377)
T 2r14_A 251 DEPEAMAFYLAGELDRRGLAYLHFNE 276 (377)
T ss_dssp SCHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 56788999999999999999999963
No 288
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=36.45 E-value=54 Score=30.12 Aligned_cols=142 Identities=12% Similarity=0.112 Sum_probs=78.6
Q ss_pred CcCCCCCCCCCCCCCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecC-CCCCC
Q 017179 143 CRFCNVKTSRAPPPPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVP-DFRGN 221 (376)
Q Consensus 143 C~FC~v~~~r~~~~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~p-d~~g~ 221 (376)
|.-..||.+. .+.+.-..+++.+.+.|.++|-+.- +...+.++..+.+.+-|+++++..++..+.+.++ .+. +
T Consensus 82 ~tVigFP~G~----~~~~~Kv~Ea~~Ai~~GAdEIDmVi-Nig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L-t 155 (239)
T 3ngj_A 82 CTVIGFPLGA----TPSEVKAYETKVAVEQGAEEVDMVI-NIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYL-T 155 (239)
T ss_dssp EEEESTTTCC----SCHHHHHHHHHHHHHTTCSEEEEEC-CHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGS-C
T ss_pred EEEeccCCCC----CchHHHHHHHHHHHHcCCCEEEEEe-ehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCC-C
Confidence 3334555432 3356667778888889999997652 1112222335667777788877655555665443 222 5
Q ss_pred hHHHHHH----HHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHH
Q 017179 222 NGCVREV----AKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTME 297 (376)
Q Consensus 222 ~e~l~~L----~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~ 297 (376)
++.+..+ .++|+|.+--+ -- + .+.++++++..-.-+... ..+.+|..- |. -|.+|.++.+
T Consensus 156 ~eei~~a~~ia~~aGADfVKTS----TG---f-~~ggAt~~dv~lmr~~vg----~~v~VKasG--GI-rt~~da~~~i- 219 (239)
T 3ngj_A 156 NEEKVEVCKRCVAAGAEYVKTS----TG---F-GTHGATPEDVKLMKDTVG----DKALVKAAG--GI-RTFDDAMKMI- 219 (239)
T ss_dssp HHHHHHHHHHHHHHTCSEEECC----CS---S-SSCCCCHHHHHHHHHHHG----GGSEEEEES--SC-CSHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHCcCEEECC----CC---C-CCCCCCHHHHHHHHHhhC----CCceEEEeC--CC-CCHHHHHHHH-
Confidence 5656555 68888876432 10 0 124667665433333332 225555542 22 4666666665
Q ss_pred HHHHcCCcEEEe
Q 017179 298 KVRAAGVDVMTF 309 (376)
Q Consensus 298 ~Lrel~vd~v~~ 309 (376)
++|.+.+..
T Consensus 220 ---~aGA~riGt 228 (239)
T 3ngj_A 220 ---NNGASRIGA 228 (239)
T ss_dssp ---HTTEEEEEE
T ss_pred ---Hhcccceec
Confidence 667776654
No 289
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=36.19 E-value=1.1e+02 Score=27.34 Aligned_cols=140 Identities=10% Similarity=0.064 Sum_probs=72.5
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCC-CC-CcccHHHHHHHHHHHHhhC--CCcEE--EEecCCCCCChHHHHHHH-Hc
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRD-DL-ADQGSGHFAQTVRKLKELK--PNMLI--EALVPDFRGNNGCVREVA-KS 231 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~-dl-~d~g~~~~~elvr~Ik~~~--p~i~I--e~l~pd~~g~~e~l~~L~-~a 231 (376)
.+.+.+.++.+..+|++.|++.|+... +. .+...+.+.+.++.+.+.. -++.+ |-....+..+.+.+..+. +.
T Consensus 107 ~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~l~~~v 186 (295)
T 3cqj_A 107 LEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMNSISKALGYAHYL 186 (295)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEECCSSGGGCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeCCCcccCCHHHHHHHHHhc
Confidence 355667778888999999998765431 11 1112344555555544321 13443 333222333444444443 44
Q ss_pred CcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEE-------eEEEecCCCHHHHHHHHHHHHHcCC
Q 017179 232 GLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKT-------SIMLGCGETPDQVVSTMEKVRAAGV 304 (376)
Q Consensus 232 Gld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt-------~imvGlGET~ee~~e~L~~Lrel~v 304 (376)
+.+.+...+|+..-. . .+.+..++++ ........ +.++- +..+|-| .-++.+.++.|++.+.
T Consensus 187 ~~~~vg~~~D~~h~~----~-~g~d~~~~l~---~~~~~i~~-vHl~D~~~g~~~~~p~G~G--~id~~~~~~~L~~~gy 255 (295)
T 3cqj_A 187 NNPWFQLYPDIGNLS----A-WDNDVQMELQ---AGIGHIVA-VHVKDTKPGVFKNVPFGEG--VVDFERCFETLKQSGY 255 (295)
T ss_dssp CCTTEEEECBHHHHH----S-SSCCHHHHHH---HTGGGBCC-EEECEEETTEEEEECTTSS--SCCHHHHHHHHHHTTC
T ss_pred CCCCeEEEeccchHh----h-cCCCHHHHHH---HhccceEE-EEeecCCCCccCCcCCCCC--ccCHHHHHHHHHHCCC
Confidence 544566656665422 1 1344544443 33443322 44432 2333444 4567788888899988
Q ss_pred c-EEEe
Q 017179 305 D-VMTF 309 (376)
Q Consensus 305 d-~v~~ 309 (376)
+ .+.+
T Consensus 256 ~g~i~l 261 (295)
T 3cqj_A 256 CGPYLI 261 (295)
T ss_dssp CSCEEE
T ss_pred ceeEEE
Confidence 7 5555
No 290
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=35.94 E-value=2.6e+02 Score=25.68 Aligned_cols=140 Identities=18% Similarity=0.255 Sum_probs=76.9
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCccc---------------HHHHHHHHHHHHhhCCCcEEEEe---cCCC
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQG---------------SGHFAQTVRKLKELKPNMLIEAL---VPDF 218 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g---------------~~~~~elvr~Ik~~~p~i~Ie~l---~pd~ 218 (376)
.+++.-.+.++++.+.|++-|-|----.|-+.||. ...+.++|+++++..+++.+-++ -|-+
T Consensus 29 P~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~ 108 (267)
T 3vnd_A 29 PSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVF 108 (267)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHH
Confidence 35688889999999999998887533233334431 22567889999876445555443 2222
Q ss_pred C-CChHHHHHHHHcCccccccc---ccchHHHHHhhc----------CCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEe
Q 017179 219 R-GNNGCVREVAKSGLNVFAHN---IETVEELQSAVR----------DHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLG 284 (376)
Q Consensus 219 ~-g~~e~l~~L~~aGld~i~h~---lEtv~~l~~~vr----------~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvG 284 (376)
. |.+..++.++++|+|.+-.. .|..+++.+.++ .+..+ .++++.+.... .|+.-.-+. .|
T Consensus 109 ~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~-~eri~~i~~~~----~gfvY~vS~-~G 182 (267)
T 3vnd_A 109 ANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNAD-ADTLKMVSEQG----EGYTYLLSR-AG 182 (267)
T ss_dssp HHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCC-HHHHHHHHHHC----CSCEEESCC-CC
T ss_pred HhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCC-HHHHHHHHHhC----CCcEEEEec-CC
Confidence 1 33667899999999985332 344444444322 12223 34444333332 244222122 23
Q ss_pred c-CCC---HHHHHHHHHHHHHc
Q 017179 285 C-GET---PDQVVSTMEKVRAA 302 (376)
Q Consensus 285 l-GET---~ee~~e~L~~Lrel 302 (376)
. |.. .+++.+.++.+++.
T Consensus 183 vTG~~~~~~~~~~~~v~~vr~~ 204 (267)
T 3vnd_A 183 VTGTESKAGEPIENILTQLAEF 204 (267)
T ss_dssp CC--------CHHHHHHHHHTT
T ss_pred CCCCccCCcHHHHHHHHHHHHh
Confidence 3 433 44577778888876
No 291
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=35.19 E-value=84 Score=29.73 Aligned_cols=148 Identities=12% Similarity=0.055 Sum_probs=83.6
Q ss_pred CchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhC-CCcEEEEecCCCCC--Ch----HHHHHHHH
Q 017179 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRG--NN----GCVREVAK 230 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~-p~i~Ie~l~pd~~g--~~----e~l~~L~~ 230 (376)
++++..+.++.+.+.|++.+-|=.|.. + .+.-.+.|++|++.. |++.+.+ |.++ +. +.++.|.+
T Consensus 144 ~~~~~~~~a~~~~~~Gf~~iKik~g~~----~--~~~~~e~v~avr~a~g~~~~l~v---Dan~~~~~~~a~~~~~~l~~ 214 (359)
T 1mdl_A 144 GVKLATERAVTAAELGFRAVKTRIGYP----A--LDQDLAVVRSIRQAVGDDFGIMV---DYNQSLDVPAAIKRSQALQQ 214 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCS----S--HHHHHHHHHHHHHHHCSSSEEEE---ECTTCSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCC----C--HHHHHHHHHHHHHHhCCCCEEEE---ECCCCCCHHHHHHHHHHHHH
Confidence 578888888888899999998865431 1 344578889998866 5665543 2111 22 23444555
Q ss_pred cCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 231 SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 231 aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
.|++.+ |- - +. ..+ ++.++.+++.. +++ |+ .+|+.....+..+.+++-.+|++.+-
T Consensus 215 ~~i~~i----E~---P---~~--~~~----~~~~~~l~~~~--~iP----I~--~de~~~~~~~~~~~i~~~~~d~v~ik 270 (359)
T 1mdl_A 215 EGVTWI----EE---P---TL--QHD----YEGHQRIQSKL--NVP----VQ--MGENWLGPEEMFKALSIGACRLAMPD 270 (359)
T ss_dssp HTCSCE----EC---C---SC--TTC----HHHHHHHHHTC--SSC----EE--ECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred hCCCeE----EC---C---CC--hhh----HHHHHHHHHhC--CCC----EE--eCCCCCCHHHHHHHHHcCCCCEEeec
Confidence 555533 31 0 11 223 44445555521 133 22 33444334444455566678887663
Q ss_pred cCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhccc
Q 017179 311 QYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASG 349 (376)
Q Consensus 311 qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sg 349 (376)
|.+-+- ..+...+..+|+..|...+.++
T Consensus 271 ----~~~~GG-------i~~~~~i~~~A~~~g~~~~~~~ 298 (359)
T 1mdl_A 271 ----AMKIGG-------VTGWIRASALAQQFGIPMSSHL 298 (359)
T ss_dssp ----TTTTTH-------HHHHHHHHHHHHHTTCCBCCBS
T ss_pred ----chhhCC-------HHHHHHHHHHHHHcCCeEeecc
Confidence 322111 4467778888888888776654
No 292
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=35.16 E-value=2.7e+02 Score=25.90 Aligned_cols=91 Identities=15% Similarity=0.210 Sum_probs=54.6
Q ss_pred HHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCC
Q 017179 195 FAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAG 274 (376)
Q Consensus 195 ~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~G 274 (376)
+.+.+++.++..|...|++..- +.+.+++..++|+|.+-. + .-+.++..+.++.++..++.
T Consensus 181 i~~av~~ar~~~~~~~I~Vev~----t~eea~eal~aGaD~I~L--D------------n~~~~~~~~~v~~l~~~~~~- 241 (284)
T 1qpo_A 181 VVDALRAVRNAAPDLPCEVEVD----SLEQLDAVLPEKPELILL--D------------NFAVWQTQTAVQRRDSRAPT- 241 (284)
T ss_dssp HHHHHHHHHHHCTTSCEEEEES----SHHHHHHHGGGCCSEEEE--E------------TCCHHHHHHHHHHHHHHCTT-
T ss_pred HHHHHHHHHHhCCCCCEEEEeC----CHHHHHHHHHcCCCEEEE--C------------CCCHHHHHHHHHHhhccCCC-
Confidence 3457788888887545555432 357778888899997632 1 23456666777776664333
Q ss_pred ceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecC
Q 017179 275 TLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (376)
Q Consensus 275 i~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY 312 (376)
+.+-.+ =|+ |.+ .+..+.+.|+|++.+|..
T Consensus 242 v~ieaS--GGI--t~~----~i~~~a~tGVD~isvG~l 271 (284)
T 1qpo_A 242 VMLESS--GGL--SLQ----TAATYAETGVDYLAVGAL 271 (284)
T ss_dssp CEEEEE--SSC--CTT----THHHHHHTTCSEEECGGG
T ss_pred eEEEEE--CCC--CHH----HHHHHHhcCCCEEEECHH
Confidence 322111 123 333 334457789999999864
No 293
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=35.02 E-value=89 Score=31.41 Aligned_cols=137 Identities=15% Similarity=0.200 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccc-c---ch-HHHHHh------------hcCCC
Q 017179 192 SGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNI-E---TV-EELQSA------------VRDHR 254 (376)
Q Consensus 192 ~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~l-E---tv-~~l~~~------------vr~r~ 254 (376)
.+.++++++.+-+.+|-+.||--.+. .+.+.+..|.+.--+.++.-. | |. .++.+- +. .-
T Consensus 283 ~~Elid~y~~lle~ypIv~IEDPl~~--dD~eg~a~Lt~~lg~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~IlIKvn-QI 359 (452)
T 3otr_A 283 GEKLKEVYEGWLKKYPIISVEDPFDQ--DDFASFSAFTKDVGEKTQVIGDDILVTNILRIEKALKDKACNCLLLKVN-QI 359 (452)
T ss_dssp HHHHHHHHHHHHHHSCEEEEECCSCT--TCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHH-HH
T ss_pred HHHHHHHHHHHHhhhCceEEecCCCh--hhHHHHHHHHHhhCCCeEEEeCccccCCHHHHHHHHhcCCCCEEEeecc-cc
Confidence 35566666665556664455432221 145666666554111122211 1 11 133222 22 23
Q ss_pred CCHHHHHHHHHHHHHhCCCCceEEEeEEEec--CCCHHHHHHHHHHHHHcCCcEEEeecCCCCCCCCCCCcccCChHHHH
Q 017179 255 ANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--GETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFE 332 (376)
Q Consensus 255 ~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl--GET~ee~~e~L~~Lrel~vd~v~~~qY~~P~~~~~~v~~~v~pe~~~ 332 (376)
.+..+.+++++.|++ .|+ .+|+|+ |||++.++..|. -.++...|..| -|. + .+ .-.+++
T Consensus 360 GgITEalka~~lA~~---~G~----~vmvshrSGETeD~~iAdLa--Vgl~~gqIKtG---ap~-r----sE--R~aKyN 420 (452)
T 3otr_A 360 GSVTEAIEACLLAQK---SGW----GVQVSHRSGETEDSFIADLV--VGLRCGQIKSG---SPC-R----SE--RLCKYN 420 (452)
T ss_dssp CCHHHHHHHHHHHHH---TTC----EEEEECCSSCCSCCHHHHHH--HHTTCCEEECC---CSC-S----HH--HHHHHH
T ss_pred ccHHHHHHHHHHHHH---cCC----eEEEeCCCCCCchhHHHHHH--HHcCCCccccC---CCc-c----hh--HHHHHH
Confidence 578999999999999 464 578998 999999886553 34555555554 121 0 01 123577
Q ss_pred HHHHHHHHHhhhhhccch
Q 017179 333 RYRALGMEMGFRYVASGP 350 (376)
Q Consensus 333 ~l~~~a~~~gf~~~~sgp 350 (376)
+|..+.+++|-..+..|.
T Consensus 421 qLlrIeeelg~~a~~~g~ 438 (452)
T 3otr_A 421 QLMRIEESLGADCVYAGE 438 (452)
T ss_dssp HHHHHHHHHGGGEEECGG
T ss_pred HHHHHHHHhCccceeccc
Confidence 788888898866555553
No 294
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=34.84 E-value=2.9e+02 Score=25.84 Aligned_cols=127 Identities=15% Similarity=0.201 Sum_probs=71.1
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeC-----------CCCCcccHHHHHHHHHHHHhhC--CCcEEEEecCCCCC---Ch
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDR-----------DDLADQGSGHFAQTVRKLKELK--PNMLIEALVPDFRG---NN 222 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r-----------~dl~d~g~~~~~elvr~Ik~~~--p~i~Ie~l~pd~~g---~~ 222 (376)
++++.+.++.+.+.|+.-|.|=++.. ..+.+ .+.+++.|+++++.. ++..|..=+..+.. -+
T Consensus 93 ~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p--~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~ 170 (295)
T 1s2w_A 93 FNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLAD--IEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLD 170 (295)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCC--HHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHH
T ss_pred HHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccC--HHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHH
Confidence 57788889999999999999988751 11222 456677777777653 55666554433311 12
Q ss_pred H---HHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHH
Q 017179 223 G---CVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKV 299 (376)
Q Consensus 223 e---~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~L 299 (376)
+ ..+.+.++|+|.+= +|. ...+.++..++.+.+.. . +++-.+ +..+|.+. .+.|
T Consensus 171 ~ai~Ra~ay~eAGAd~i~--~e~----------~~~~~~~~~~i~~~~~~---~-~P~i~~-~~~~~~~~------~~eL 227 (295)
T 1s2w_A 171 EALKRAEAYRNAGADAIL--MHS----------KKADPSDIEAFMKAWNN---Q-GPVVIV-PTKYYKTP------TDHF 227 (295)
T ss_dssp HHHHHHHHHHHTTCSEEE--ECC----------CSSSSHHHHHHHHHHTT---C-SCEEEC-CSTTTTSC------HHHH
T ss_pred HHHHHHHHHHHcCCCEEE--EcC----------CCCCHHHHHHHHHHcCC---C-CCEEEe-CCCCCCCC------HHHH
Confidence 3 34566778887652 221 01123333333333322 1 333222 12234442 6788
Q ss_pred HHcCCcEEEee
Q 017179 300 RAAGVDVMTFG 310 (376)
Q Consensus 300 rel~vd~v~~~ 310 (376)
.++|+.++.++
T Consensus 228 ~~lGv~~v~~~ 238 (295)
T 1s2w_A 228 RDMGVSMVIWA 238 (295)
T ss_dssp HHHTCCEEEEC
T ss_pred HHcCCcEEEEC
Confidence 88888888875
No 295
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=34.56 E-value=2.6e+02 Score=25.27 Aligned_cols=128 Identities=16% Similarity=0.207 Sum_probs=76.1
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCC--C----hHHHHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG--N----NGCVREVAK 230 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g--~----~e~l~~L~~ 230 (376)
.+.+++.+.++++.+.|+.-|++.-+ +....+.++.. |.+.+...++.-.| + ....+...+
T Consensus 33 ~t~~~i~~l~~~a~~~~~~aVcv~p~------------~v~a~~~l~~~-~~v~v~tvigFP~G~~~~~~k~~e~~~Av~ 99 (234)
T 1n7k_A 33 ATEEDVRNLVREASDYGFRCAVLTPV------------YTVKISGLAEK-LGVKLCSVIGFPLGQAPLEVKLVEAQTVLE 99 (234)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECHH------------HHHHHHHHHHH-HTCCEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEchH------------HheeehHhCCC-CCceEEEEeCCCCCCCcHHHHHHHHHHHHH
Confidence 56899999999999999999997521 22223334332 24777766632122 1 123455556
Q ss_pred cCccccccccc--chHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEE
Q 017179 231 SGLNVFAHNIE--TVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMT 308 (376)
Q Consensus 231 aGld~i~h~lE--tv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~ 308 (376)
.|+|-+..-+. ...+ .-+++.-.+.+.+++ .|+++|.=+-.|+= |++++....+...+.|.|+|.
T Consensus 100 ~GAdEID~vinig~~~~---------~v~~ei~~v~~a~~~---~g~~lKvIlEt~~L-~~e~i~~a~ria~eaGADfVK 166 (234)
T 1n7k_A 100 AGATELDVVPHLSLGPE---------AVYREVSGIVKLAKS---YGAVVKVILEAPLW-DDKTLSLLVDSSRRAGADIVK 166 (234)
T ss_dssp HTCCEEEECCCGGGCHH---------HHHHHHHHHHHHHHH---TTCEEEEECCGGGS-CHHHHHHHHHHHHHTTCSEEE
T ss_pred cCCCEEEEeccchHHHH---------HHHHHHHHHHHHHhh---cCCeEEEEEeccCC-CHHHHHHHHHHHHHhCCCEEE
Confidence 78876544221 1111 112344455555555 24555433322321 789999999999999999998
Q ss_pred ee
Q 017179 309 FG 310 (376)
Q Consensus 309 ~~ 310 (376)
-.
T Consensus 167 Ts 168 (234)
T 1n7k_A 167 TS 168 (234)
T ss_dssp SC
T ss_pred eC
Confidence 74
No 296
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=34.44 E-value=2.9e+02 Score=25.84 Aligned_cols=136 Identities=18% Similarity=0.183 Sum_probs=67.9
Q ss_pred HHHHHCCCcEEEEEe-eeC-CCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCC------------------------
Q 017179 167 EAIASWGLDYVVITS-VDR-DDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG------------------------ 220 (376)
Q Consensus 167 ~al~~~G~~eIvLTs-g~r-~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g------------------------ 220 (376)
+.+++.|+..|.|-= ++. ++..| .+++.++++.+++.-=.+.+.+-..|+..
T Consensus 34 ~ilk~~G~n~vRlri~v~P~~g~~d--~~~~~~~~~~ak~~Gl~v~ld~hysd~wadP~~q~~p~~W~~~~~~~~~~~~~ 111 (334)
T 1fob_A 34 TILADAGINSIRQRVWVNPSDGSYD--LDYNLELAKRVKAAGMSLYLDLHLSDTWADPSDQTTPSGWSTTDLGTLKWQLY 111 (334)
T ss_dssp HHHHHHTCCEEEEEECSCCTTCTTC--HHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTSCSSCHHHHHHHHH
T ss_pred HHHHHcCCCEEEEEEEECCCCCccC--HHHHHHHHHHHHHCCCEEEEEeccCCCCCCcccccCccccccCChHHHHHHHH
Confidence 445678898888721 110 11222 67788888888775322333332222111
Q ss_pred --ChHHHHHHHHcCc--ccccccccchHHHHHhhcCCC--CCHHHHHHHHHH----HHHhC--CCCceEEEeEEEec--C
Q 017179 221 --NNGCVREVAKSGL--NVFAHNIETVEELQSAVRDHR--ANFKQSLDVLMM----AKDYV--PAGTLTKTSIMLGC--G 286 (376)
Q Consensus 221 --~~e~l~~L~~aGl--d~i~h~lEtv~~l~~~vr~r~--~t~e~~L~vl~~----ak~~~--p~Gi~tkt~imvGl--G 286 (376)
..+.+..|++.|. +.+..+=|....+ +-|.+ .++++..+.+.. +|+.. |. . -+|+.+ |
T Consensus 112 ~yt~~v~~~l~~~g~~v~~v~vGNE~~~G~---lwp~g~~~~~~~l~~~~~~a~~avr~~~~~p~-~----~v~~h~~~~ 183 (334)
T 1fob_A 112 NYTLEVCNTFAENDIDIEIISIGNEIRAGL---LWPLGETSSYSNIGALLHSGAWGVKDSNLATT-P----KIMIHLDDG 183 (334)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEESSSGGGCS---SBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSC-C----EEEEEESCT
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeecCcccc---cCCCCcchhHHHHHHHHHHHHHHHHHhccCCC-C----eEEEEcCCc
Confidence 1256677777664 3343332322111 11111 145666555554 44443 32 2 256666 4
Q ss_pred CCHHHHHHHHHHHHHcC------CcEEEeecC
Q 017179 287 ETPDQVVSTMEKVRAAG------VDVMTFGQY 312 (376)
Q Consensus 287 ET~ee~~e~L~~Lrel~------vd~v~~~qY 312 (376)
...+.+..-++.+.+.+ +|+|.+.-|
T Consensus 184 ~~~~~~~~~~~~~~~~g~~~~~~~DvIG~syY 215 (334)
T 1fob_A 184 WSWDQQNYFYETVLATGELLSTDFDYFGVSYY 215 (334)
T ss_dssp TCHHHHHHHHHHHHHTSSSCGGGCCEEEEECC
T ss_pred CchHHHHHHHHHHHHcCCCCCCCcCEEEEeCC
Confidence 55554544556666554 699999544
No 297
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=34.24 E-value=1e+02 Score=29.78 Aligned_cols=87 Identities=7% Similarity=0.041 Sum_probs=49.1
Q ss_pred HHHHHHHcCccccccccc---chHHHHHh-hcCC----CCCHHH----HHHHHHHHHHhCCCC-ceEEEeE---EEec--
Q 017179 224 CVREVAKSGLNVFAHNIE---TVEELQSA-VRDH----RANFKQ----SLDVLMMAKDYVPAG-TLTKTSI---MLGC-- 285 (376)
Q Consensus 224 ~l~~L~~aGld~i~h~lE---tv~~l~~~-vr~r----~~t~e~----~L~vl~~ak~~~p~G-i~tkt~i---mvGl-- 285 (376)
..+..+++|.|.+.++.- ..+..+.- .+.| +.+++. .+++++.+++..+.. +.++-+. .-|+
T Consensus 166 AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~ 245 (361)
T 3gka_A 166 GAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGD 245 (361)
T ss_dssp HHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCC
T ss_pred HHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCCC
Confidence 445566788887765421 12222211 1211 234443 367777777765421 2233222 1133
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 286 GETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 286 GET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
+++.++..+.++.|.+.++|++++.
T Consensus 246 ~~~~~~~~~la~~l~~~Gvd~i~v~ 270 (361)
T 3gka_A 246 SDPAATFGHVARELGRRRIAFLFAR 270 (361)
T ss_dssp SCHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCcHHHHHHHHHHHHHcCCCEEEEC
Confidence 2346789999999999999999985
No 298
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=34.21 E-value=87 Score=28.23 Aligned_cols=137 Identities=9% Similarity=0.150 Sum_probs=71.6
Q ss_pred HHHHHHHHCCCcEEEEEeeeCCCCCcccHH----HHHHHHHHHHhhCCCcEEEEec-CCCCCChHHHHHHHHcCcccccc
Q 017179 164 NVAEAIASWGLDYVVITSVDRDDLADQGSG----HFAQTVRKLKELKPNMLIEALV-PDFRGNNGCVREVAKSGLNVFAH 238 (376)
Q Consensus 164 ~~a~al~~~G~~eIvLTsg~r~dl~d~g~~----~~~elvr~Ik~~~p~i~Ie~l~-pd~~g~~e~l~~L~~aGld~i~h 238 (376)
+.++++.+.| .+|-.=|-.++++.....+ .+....+.|++....-.+..+- |--.-+...++.+++.|...+.-
T Consensus 98 ~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G~~~~~~fr~P~G~~~~~~~~~l~~~G~~~v~w 176 (247)
T 2j13_A 98 DLLLRMKDEG-HIIGNHSWSHPDFTAVNDEKLREELTSVTEEIKKVTGQKEVKYVRPPRGVFSERTLALTKEMGYYNVFW 176 (247)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHCCSCCCEECCGGGEECHHHHHHHHHTTCEEECC
T ss_pred HHHHHHHHCC-CEEEecCCCCcChhhCCHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCCHHHHHHHHHCCCEEEec
Confidence 4566777888 4664444455555432222 2333344454443211122232 21111688899999999887777
Q ss_pred cccchH-HHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-C--CCHHHHHHHHHHHHHcCCcEEEeecCCC
Q 017179 239 NIETVE-ELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-G--ETPDQVVSTMEKVRAAGVDVMTFGQYMR 314 (376)
Q Consensus 239 ~lEtv~-~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-G--ET~ee~~e~L~~Lrel~vd~v~~~qY~~ 314 (376)
++++.+ .. .. ..+.+. +++.+.+....| .||+.+ + .|.+.+-+.|..|++.|..++++.+++.
T Consensus 177 svd~~Dw~~-~~----~~~~~~---~~~~v~~~~~~G-----~IiL~Hd~~~~t~~aL~~ii~~l~~~Gy~fvtl~ell~ 243 (247)
T 2j13_A 177 SLAFLDWKV-DE----QRGWQY---AHNNVMTMIHPG-----SILLLHAISKDNAEALAKIIDDLREKGYHFKSLDDLVK 243 (247)
T ss_dssp SEECCCC--------------------------CCTT-----BEEEECCCSTTHHHHHHHHHHHHHHTTCEEECHHHHHH
T ss_pred CcccCcCCC-CC----CCCHHH---HHHHHHHhcCCC-----eEEEEeCCcHhHHHHHHHHHHHHHHCCCEEEEhHHhhc
Confidence 666654 21 10 011111 112222211123 366666 2 5778888999999999999999977653
No 299
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=34.20 E-value=97 Score=29.21 Aligned_cols=62 Identities=11% Similarity=0.210 Sum_probs=42.2
Q ss_pred HHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 164 ~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
+.++++.+.|++.|.|- ... .+.+.+.++.++ +++.+++.-+ . +.+.+..+.+.|+|.+..+
T Consensus 209 ~ea~eAl~aGaD~I~LD-----n~~---~~~l~~av~~~~---~~v~ieaSGG-I--t~~~i~~~a~tGVD~IsvG 270 (287)
T 3tqv_A 209 DELNQAIAAKADIVMLD-----NFS---GEDIDIAVSIAR---GKVALEVSGN-I--DRNSIVAIAKTGVDFISVG 270 (287)
T ss_dssp HHHHHHHHTTCSEEEEE-----SCC---HHHHHHHHHHHT---TTCEEEEESS-C--CTTTHHHHHTTTCSEEECS
T ss_pred HHHHHHHHcCCCEEEEc-----CCC---HHHHHHHHHhhc---CCceEEEECC-C--CHHHHHHHHHcCCCEEEEC
Confidence 45666667899988872 222 344666666554 4677875443 3 6778999999999998664
No 300
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=34.19 E-value=2.6e+02 Score=25.21 Aligned_cols=121 Identities=8% Similarity=0.040 Sum_probs=68.9
Q ss_pred hhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEE--EecCCCCCChHHHHHHHHcCccccc
Q 017179 160 DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIE--ALVPDFRGNNGCVREVAKSGLNVFA 237 (376)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie--~l~pd~~g~~e~l~~L~~aGld~i~ 237 (376)
..+.+..+.+.+.|+..+|+.+..... .+ .+++++++ +.+|+..+. .+.|+. ..+.|+.+.+.|+..+.
T Consensus 53 ~~~e~~l~~~~~~GV~~~V~v~~~~~~-~~--n~~~~~~~----~~~p~r~~g~~~v~P~~--~~~eL~~l~~~gv~Gi~ 123 (294)
T 4i6k_A 53 ATVQSFISHLDEHNFTHGVLVQPSFLG-TN--NQAMLNAI----QQYPDRLKGIAVVQHTT--TFNELVNLKAQGIVGVR 123 (294)
T ss_dssp BCHHHHHHHHHHTTCCEEEEECCGGGT-TC--CHHHHHHH----HHSTTTEEEEECCCTTC--CHHHHHHHHTTTEEEEE
T ss_pred CCHHHHHHHHHHcCCCeEEEecCcccc-cc--hHHHHHHH----HHCCCeEEEEEEeCCcc--cHHHHHHHHHCCCcEEE
Confidence 345666677779999999988654211 11 23344433 345653332 345554 56778888887766555
Q ss_pred ccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCc
Q 017179 238 HNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVD 305 (376)
Q Consensus 238 h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd 305 (376)
++.. . -.++...-+.+...++.+.+. |+.+-.++ ...++.+.+..+++.++.
T Consensus 124 l~~~--~-----~~~~~~~~~~~~~~~~~a~~~---glpv~iH~------~~~~l~~~~~~l~~~p~~ 175 (294)
T 4i6k_A 124 LNLF--G-----LNLPALNTPDWQKFLRNVESL---NWQVELHA------PPKYLVQLLPQLNEYSFD 175 (294)
T ss_dssp EECT--T-----SCCCCSSSHHHHHHHHHHHHT---TCEEEEEC------CHHHHHHHHHHHTTSSSC
T ss_pred eccC--C-----CCCCCcccHHHHHHHHHHHHc---CCEEEEee------CcchHHHHHHHHHHCCCC
Confidence 4321 1 001122347778888888884 66655443 234555666666766644
No 301
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=34.12 E-value=98 Score=33.97 Aligned_cols=111 Identities=14% Similarity=0.145 Sum_probs=66.7
Q ss_pred ccHHHHHHHHHHHHhhCCCcEEEEe--cC-CCCCChHHHHHHHHcCcccccccccchHHHHHhhcCCC------CCHHHH
Q 017179 190 QGSGHFAQTVRKLKELKPNMLIEAL--VP-DFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHR------ANFKQS 260 (376)
Q Consensus 190 ~g~~~~~elvr~Ik~~~p~i~Ie~l--~p-d~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~------~t~e~~ 260 (376)
.+.+++.+-++.+++..|+..+-+. .+ +...-.+.++.+.++|.|.+..|+-.-.. ++.++ .+.+..
T Consensus 616 ~~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~----~~~~~~G~~~~~~~~~~ 691 (1025)
T 1gte_A 616 KTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG----MGERGMGLACGQDPELV 691 (1025)
T ss_dssp SCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC----CC-----SBGGGCHHHH
T ss_pred hhHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC----CCCCCcccccccCHHHH
Confidence 3567777778888877765444332 22 11001456677778999999888653211 11011 357788
Q ss_pred HHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 261 LDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 261 L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
.++++.+++.. ++++..-+.. +.+++.+..+.+.+.|+|.|.+.
T Consensus 692 ~~iv~~v~~~~--~~Pv~vK~~~----~~~~~~~~a~~~~~~G~d~i~v~ 735 (1025)
T 1gte_A 692 RNICRWVRQAV--QIPFFAKLTP----NVTDIVSIARAAKEGGADGVTAT 735 (1025)
T ss_dssp HHHHHHHHHHC--SSCEEEEECS----CSSCHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHhh--CCceEEEeCC----ChHHHHHHHHHHHHcCCCEEEEe
Confidence 88999988863 1232222211 22357778888899999999884
No 302
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=34.02 E-value=1.2e+02 Score=26.49 Aligned_cols=124 Identities=15% Similarity=0.195 Sum_probs=70.4
Q ss_pred HHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccc---c
Q 017179 162 PTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFA---H 238 (376)
Q Consensus 162 i~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~---h 238 (376)
..+.++.+.+.|.+.|+|-.....+ +++ ..+.++++.+++..|+..+-+-.. +.+.+....++|+|.+. +
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~-~~~--~~~~~~i~~i~~~~~~~~v~~~~~----t~~ea~~a~~~Gad~i~~~v~ 162 (234)
T 1yxy_A 90 TMTEVDQLAALNIAVIAMDCTKRDR-HDG--LDIASFIRQVKEKYPNQLLMADIS----TFDEGLVAHQAGIDFVGTTLS 162 (234)
T ss_dssp SHHHHHHHHTTTCSEEEEECCSSCC-TTC--CCHHHHHHHHHHHCTTCEEEEECS----SHHHHHHHHHTTCSEEECTTT
T ss_pred hHHHHHHHHHcCCCEEEEcccccCC-CCC--ccHHHHHHHHHHhCCCCeEEEeCC----CHHHHHHHHHcCCCEEeeecc
Confidence 4566777889999988776543221 111 125678888988877665433221 45667788899999882 2
Q ss_pred cccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCC-HHHHHHHHHHHHHcCCcEEEeecC
Q 017179 239 NIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGET-PDQVVSTMEKVRAAGVDVMTFGQY 312 (376)
Q Consensus 239 ~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET-~ee~~e~L~~Lrel~vd~v~~~qY 312 (376)
+..... +... ..+ ++.++.+++. +++ ++..=|=+ .+++.+.+ +.|+|.+-+|..
T Consensus 163 g~~~~~---~~~~--~~~----~~~i~~~~~~---~ip----via~GGI~s~~~~~~~~----~~Gad~v~vGsa 217 (234)
T 1yxy_A 163 GYTPYS---RQEA--GPD----VALIEALCKA---GIA----VIAEGKIHSPEEAKKIN----DLGVAGIVVGGA 217 (234)
T ss_dssp TSSTTS---CCSS--SCC----HHHHHHHHHT---TCC----EEEESCCCSHHHHHHHH----TTCCSEEEECHH
T ss_pred ccCCCC---cCCC--CCC----HHHHHHHHhC---CCC----EEEECCCCCHHHHHHHH----HCCCCEEEEchH
Confidence 221100 0011 222 4555666552 233 23323444 77766544 469999988743
No 303
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=33.95 E-value=1.1e+02 Score=28.25 Aligned_cols=141 Identities=12% Similarity=0.117 Sum_probs=79.1
Q ss_pred hhHHHHHHHHHHCCCcEEEEEee-eCCCCC---c--ccHHHHHHHHHHHHhhCCCcEEEEe-cCC------CCCCh-HHH
Q 017179 160 DEPTNVAEAIASWGLDYVVITSV-DRDDLA---D--QGSGHFAQTVRKLKELKPNMLIEAL-VPD------FRGNN-GCV 225 (376)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsg-~r~dl~---d--~g~~~~~elvr~Ik~~~p~i~Ie~l-~pd------~~g~~-e~l 225 (376)
+.+.+.++.+.++|.+.|++-+| +..+++ + ...+.+++.+++|.+...++.|.+- .|. +..+. +.+
T Consensus 107 ~~~~~~i~~A~~LGa~~vv~~~g~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~~i~lE~~p~~~~~~~~~~~~~~~~ 186 (333)
T 3ktc_A 107 ELMHESAGIVRELGANYVKVWPGQDGWDYPFQVSHKNLWKLAVDGMRDLAGANPDVKFAIEYKPREPRVKMTWDSAARTL 186 (333)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCTTCEESSTTSSCHHHHHHHHHHHHHHHHHTCTTSEEEEECCSCSSSSEESSCSHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEECCCCCCcCCCCcCCHHHHHHHHHHHHHHHHHHhhcCCEEEEEecCCCCccccCCCHHHHH
Confidence 44556677788999999998766 221111 1 1345677777777766555544432 121 22243 444
Q ss_pred HHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEE-------EeEEEecCCCH-HHHHHHHH
Q 017179 226 REVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTK-------TSIMLGCGETP-DQVVSTME 297 (376)
Q Consensus 226 ~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tk-------t~imvGlGET~-ee~~e~L~ 297 (376)
..+.+.+.+.+...+|+..-.. .+.+..+.++.+....++ . .+.++ .+.++ |+-+ .++.+.++
T Consensus 187 ~ll~~v~~~~vgl~lD~~H~~~-----~g~~~~~~~~~~~~~~~i-~-~vH~~D~~~~~d~~~~~--G~G~~~d~~~i~~ 257 (333)
T 3ktc_A 187 LGIEDIGLDNVGVLLDFGHALY-----GGESPADSAQLIIDRGRL-F-GMDVNDNLRGWDDDLVV--GTVHMTEIFEFFY 257 (333)
T ss_dssp HHHHHHTCTTEEEEEEHHHHHH-----TTCCHHHHHHHHHHTTCE-E-EEEBCBCCSSSCCCBCT--TSSCHHHHHHHHH
T ss_pred HHHHHcCCcceEEEEecCcHhh-----hcCCHHHHHHHHHhCCCE-E-EEEeCCCCCCCCCCcCC--CCCCHHHHHHHHH
Confidence 5555556555667677655321 245676666655332221 0 12222 22234 4444 57888899
Q ss_pred HHHHcCCc-EEEe
Q 017179 298 KVRAAGVD-VMTF 309 (376)
Q Consensus 298 ~Lrel~vd-~v~~ 309 (376)
.|++.+.+ .+.+
T Consensus 258 ~L~~~gy~G~i~l 270 (333)
T 3ktc_A 258 VLKINNWQGVWQL 270 (333)
T ss_dssp HHHHTTCCCCEEE
T ss_pred HHHHcCCCceEEE
Confidence 99999987 4555
No 304
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=33.53 E-value=2.6e+02 Score=24.89 Aligned_cols=103 Identities=12% Similarity=0.031 Sum_probs=60.3
Q ss_pred HHHHHHCCC--cEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccch
Q 017179 166 AEAIASWGL--DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETV 243 (376)
Q Consensus 166 a~al~~~G~--~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv 243 (376)
++.+.+.+. +.++++|-+ .+.++.+++..|.+.+..+.... ..+....+...|++.+..+..
T Consensus 133 ~~~l~~~~~~~~~vii~SF~------------~~~l~~~~~~~p~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~~~-- 196 (252)
T 3qvq_A 133 VEVLKQHWPQDLPLLFSSFN------------YFALVSAKALWPEIARGYNVSAI--PSAWQERLEHLDCAGLHIHQS-- 196 (252)
T ss_dssp HHHHHHHSCTTSCEEEEESC------------HHHHHHHHHHCTTSCEEEECSSC--CTTHHHHHHHHTCSEEEEEGG--
T ss_pred HHHHHHhCcccCCEEEEeCC------------HHHHHHHHHHCCCCcEEEEEecC--chhHHHHHHHcCCeEEecchh--
Confidence 344445454 468888743 24677778888888887776443 233445555666665544321
Q ss_pred HHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 244 EELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 244 ~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
.+. -+.++.+++ .|+.+...-+ .+.+ .++.+.+.|||.|.-
T Consensus 197 -----~~~---------~~~v~~~~~---~G~~v~~WTv----n~~~----~~~~l~~~GVdgIiT 237 (252)
T 3qvq_A 197 -----FFD---------VQQVSDIKA---AGYKVLAFTI----NDES----LALKLYNQGLDAVFS 237 (252)
T ss_dssp -----GCC---------HHHHHHHHH---TTCEEEEECC----CCHH----HHHHHHHTTCCEEEE
T ss_pred -----hCC---------HHHHHHHHH---CCCEEEEEcC----CCHH----HHHHHHHcCCCEEEe
Confidence 111 156777887 4776655432 3333 456677899998754
No 305
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=33.22 E-value=1.7e+02 Score=22.76 Aligned_cols=58 Identities=9% Similarity=0.169 Sum_probs=38.0
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHH
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD 269 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~ 269 (376)
.++++.|++..|.+.|-+++..- +.+......++|++.|= . +..+.++.++.|+.+.+
T Consensus 82 ~~~~~~l~~~~~~~~ii~ls~~~--~~~~~~~~~~~g~~~~l-------------~-Kp~~~~~l~~~i~~~~~ 139 (150)
T 4e7p_A 82 LEVLEWIRSEKLETKVVVVTTFK--RAGYFERAVKAGVDAYV-------------L-KERSIADLMQTLHTVLE 139 (150)
T ss_dssp HHHHHHHHHTTCSCEEEEEESCC--CHHHHHHHHHTTCSEEE-------------E-TTSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCeEEEEeCCC--CHHHHHHHHHCCCcEEE-------------e-cCCCHHHHHHHHHHHHc
Confidence 46788888878888877777654 56677777888876542 1 23455565666655554
No 306
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=32.97 E-value=3.1e+02 Score=25.67 Aligned_cols=131 Identities=19% Similarity=0.247 Sum_probs=65.9
Q ss_pred HHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecC-CCCCChHHH-HHHHHcCccccccccc
Q 017179 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVP-DFRGNNGCV-REVAKSGLNVFAHNIE 241 (376)
Q Consensus 164 ~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~p-d~~g~~e~l-~~L~~aGld~i~h~lE 241 (376)
..++++.+.|+-. .++++ ...+.+.+.....++ +++..++..+-.... .+ +.+.+ +.+..+|.|.+..|+.
T Consensus 77 ~~a~aa~~~G~~~-~~~~~-~~~l~~~~~~~~~~~---~~~~~~~~pv~~~i~~~~--~~~~~~~~~~~~gad~i~i~~~ 149 (349)
T 1p0k_A 77 SLARAASQAGIPL-AVGSQ-MSALKDPSERLSYEI---VRKENPNGLIFANLGSEA--TAAQAKEAVEMIGANALQIHLN 149 (349)
T ss_dssp HHHHHHHHHTCCE-ECCCC-TTTTTCHHHHHHHHH---HHHHCSSSCEEEEEETTC--CHHHHHHHHHHTTCSEEEEEEC
T ss_pred HHHHHHHHcCCcE-Eeccc-hhcccCcccccceeh---hhhhCCCceeEEeecCCC--CHHHHHHHHHhcCCCeEEeccc
Confidence 5566777888764 33332 222333112222233 444444544433332 33 33433 4455678888877765
Q ss_pred chHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 242 TVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 242 tv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
........-. ...++.+++.++.+++..+.-+.+|. +|.|-+.++ .+.+.+.|+|.|.+.
T Consensus 150 ~~~~~~~~~~--~~~~~~~~~~i~~vr~~~~~Pv~vK~---~~~~~~~~~----a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 150 VIQEIVMPEG--DRSFSGALKRIEQICSRVSVPVIVKE---VGFGMSKAS----AGKLYEAGAAAVDIG 209 (349)
T ss_dssp TTTTC----------CTTHHHHHHHHHHHCSSCEEEEE---ESSCCCHHH----HHHHHHHTCSEEEEE
T ss_pred chhhhcCCCC--CcchHHHHHHHHHHHHHcCCCEEEEe---cCCCCCHHH----HHHHHHcCCCEEEEc
Confidence 4332211111 11222377888888875321122331 367777544 567778999998885
No 307
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=32.91 E-value=2.8e+02 Score=25.16 Aligned_cols=73 Identities=15% Similarity=0.274 Sum_probs=42.0
Q ss_pred HHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc-ccch
Q 017179 165 VAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN-IETV 243 (376)
Q Consensus 165 ~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~-lEtv 243 (376)
.++.+...|++.++|-.- |-+. ..+.+.+.++.+......+.|++. .. ++..++.+.++|++.+-.- +++.
T Consensus 31 ~~e~a~~~GaD~v~lDlE---~~~~-~~~~~~~~~~a~~~~~~~~~VRv~--~~--~~~~i~~~l~~g~~~I~~P~V~s~ 102 (267)
T 2vws_A 31 MAEIAATSGYDWLLIDGE---HAPN-TIQDLYHQLQAVAPYASQPVIRPV--EG--SKPLIKQVLDIGAQTLLIPMVDTA 102 (267)
T ss_dssp HHHHHHTTCCSEEEEETT---TSCC-CHHHHHHHHHHHTTSSSEEEEECS--SC--CHHHHHHHHHTTCCEEEECCCCSH
T ss_pred HHHHHHhCCCCEEEEcCC---CCCC-CHHHHHHHHHHHHhCCCcEEEEeC--CC--CHHHHHHHHHhCCCEEEeCCCCCH
Confidence 355667889998887432 2221 145566666666432112445543 22 6788899999998854332 5555
Q ss_pred HH
Q 017179 244 EE 245 (376)
Q Consensus 244 ~~ 245 (376)
++
T Consensus 103 ee 104 (267)
T 2vws_A 103 EQ 104 (267)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 308
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=32.77 E-value=1.3e+02 Score=27.91 Aligned_cols=85 Identities=16% Similarity=0.201 Sum_probs=60.5
Q ss_pred ChHHHHHHHHcCcccccccccchHHHHHhhcC--CCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHH
Q 017179 221 NNGCVREVAKSGLNVFAHNIETVEELQSAVRD--HRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEK 298 (376)
Q Consensus 221 ~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~--r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~ 298 (376)
+.-....+.++|.|.+-.+=..+-.. .-.| ...++++.+..++.+.+..+ +++-.++=.|+|.+.+++.++...
T Consensus 25 D~~sA~~~~~aG~~ai~vsg~s~a~~--~G~pD~~~vt~~em~~~~~~I~~~~~--~pviaD~d~Gyg~~~~~~~~~v~~ 100 (275)
T 2ze3_A 25 DVASARLLEAAGFTAIGTTSAGIAHA--RGRTDGQTLTRDEMGREVEAIVRAVA--IPVNADIEAGYGHAPEDVRRTVEH 100 (275)
T ss_dssp SHHHHHHHHHHTCSCEEECHHHHHHH--SCCCSSSSSCHHHHHHHHHHHHHHCS--SCEEEECTTCSSSSHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECcHHHHHh--CCCCCCCCCCHHHHHHHHHHHHhhcC--CCEEeecCCCCCCCHHHHHHHHHH
Confidence 33445556667777664431111111 1111 24789999999999888653 678999999999999999999999
Q ss_pred HHHcCCcEEEe
Q 017179 299 VRAAGVDVMTF 309 (376)
Q Consensus 299 Lrel~vd~v~~ 309 (376)
+.+.|+.-|+|
T Consensus 101 l~~aGaagv~i 111 (275)
T 2ze3_A 101 FAALGVAGVNL 111 (275)
T ss_dssp HHHTTCSEEEE
T ss_pred HHHcCCcEEEE
Confidence 99999999998
No 309
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=32.74 E-value=2.5e+02 Score=24.55 Aligned_cols=108 Identities=6% Similarity=0.001 Sum_probs=57.8
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCC-CCC-cccHHHHHHHHHHHHhhCCCcEEEE--ecCC---CCCChHHHHHHHHc
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRD-DLA-DQGSGHFAQTVRKLKELKPNMLIEA--LVPD---FRGNNGCVREVAKS 231 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~-dl~-d~g~~~~~elvr~Ik~~~p~i~Ie~--l~pd---~~g~~e~l~~L~~a 231 (376)
.+.+.+.++.+.++|.+.|++-.|... +.. +...+.+.+.++.+.+...++.+.+ ..+. +..+.+.+..+.+.
T Consensus 88 ~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~ 167 (285)
T 1qtw_A 88 RDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDG 167 (285)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCCBCTTTSCHHHHHHHHHHHHHHHHHHCSSCEEEEECCCCCTTBCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHhccCCCEEEEecCCCCCCcccCCHHHHHHHHHh
Confidence 455666778888999999998766432 211 1223456666666654444555533 2211 12245555555543
Q ss_pred --CcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHH
Q 017179 232 --GLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAK 268 (376)
Q Consensus 232 --Gld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak 268 (376)
+.+.+...+|+..-...... -.+++.+-++++.+.
T Consensus 168 v~~~~~~g~~~D~~H~~~~g~~--~~~~~~~~~~~~~~~ 204 (285)
T 1qtw_A 168 VEDKSRVGVCIDTCHAFAAGYD--LRTPAECEKTFADFA 204 (285)
T ss_dssp CSCGGGEEEEEEHHHHHHHTCC--CSSHHHHHHHHHHHH
T ss_pred hcCccceEEEEEhHhHHHcCCC--cCChHHHHHHHHHHH
Confidence 55667777787664332211 234445545554444
No 310
>4hjf_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, EAL domain, signaling protein; HET: MSE C2E; 1.75A {Caulobacter crescentus}
Probab=32.35 E-value=91 Score=29.53 Aligned_cols=146 Identities=14% Similarity=0.197 Sum_probs=75.4
Q ss_pred CchhHHHHHHHHHHCCC--cEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccc
Q 017179 158 DPDEPTNVAEAIASWGL--DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNV 235 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~--~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~ 235 (376)
+++-+......+.+.|+ ..++|-=.+..-+.+ .....+.++.+++. ++.| .+-||......+..|.+..+|.
T Consensus 177 ~~~~~~~~~~~l~~~~~~~~~l~lEitE~~~~~~--~~~~~~~l~~Lr~~--G~~i--alDDFGtG~ssl~~L~~lp~d~ 250 (340)
T 4hjf_A 177 RPGLVADVAETLRVNRLPRGALKLEVTESDIMRD--PERAAVILKTLRDA--GAGL--ALDDFGTGFSSLSYLTRLPFDT 250 (340)
T ss_dssp CTTHHHHHHHHHHHTTCCTTSEEEEEEHHHHHTS--HHHHHHHHHHHHHH--TCEE--EEECTTSSSCGGGTGGGSCCSE
T ss_pred CchHHHHHHHHHHhhCCCcceEEEEeeccccccc--hHHHHHHHHHHHHc--CCCc--cccCCCCCcchHHHHHhCCCCh
Confidence 34444455555666665 344442222111112 34566777777764 3443 4445533334456666666666
Q ss_pred ccccccchHHHHHhhcCCCCCHHHHH-HHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecCC-
Q 017179 236 FAHNIETVEELQSAVRDHRANFKQSL-DVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYM- 313 (376)
Q Consensus 236 i~h~lEtv~~l~~~vr~r~~t~e~~L-~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY~- 313 (376)
+-+- ..+...+.. .......+ .++..|+.. |+.|-+-. -||.++ ++.|+++|+|.+= |.|+
T Consensus 251 iKID----~sfv~~~~~-~~~~~~iv~~ii~la~~l---g~~vvAEG----VEt~~q----~~~L~~lG~d~~Q-Gy~~~ 313 (340)
T 4hjf_A 251 LKID----RYFVRTMGN-NAGSAKIVRSVVKLGQDL---DLEVVAEG----VENAEM----AHALQSLGCDYGQ-GFGYA 313 (340)
T ss_dssp EEEC----HHHHHHTTT-CHHHHHHHHHHHHHHHHH---TCEEEEEC----CCSHHH----HHHHHHTTCCEEE-STTTC
T ss_pred hccc----HHhhhcccC-CHhHHHHHHHHHHHHHHc---CCEEEEEe----CCcHHH----HHHHHHcCCCEee-cCccc
Confidence 6541 244444441 21222233 455667774 55443322 299876 5778999999763 3444
Q ss_pred CCCCCCCCCcccCChHHHHHHHH
Q 017179 314 RPSKRHMPVSEYITPEAFERYRA 336 (376)
Q Consensus 314 ~P~~~~~~v~~~v~pe~~~~l~~ 336 (376)
+| + +++++..|-+
T Consensus 314 ~P----~------~~~~~~~~l~ 326 (340)
T 4hjf_A 314 PA----L------SPQEAEVYLN 326 (340)
T ss_dssp CS----B------CHHHHHHHHH
T ss_pred cC----C------CHHHHHHHHH
Confidence 33 2 3667766643
No 311
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=32.31 E-value=1.4e+02 Score=22.79 Aligned_cols=39 Identities=5% Similarity=0.001 Sum_probs=28.4
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++.|++..|.+.|-++++.. +.+......++|++.|
T Consensus 68 ~~~~~~l~~~~~~~~ii~~s~~~--~~~~~~~~~~~ga~~~ 106 (136)
T 3kto_A 68 IELLETLVKRGFHLPTIVMASSS--DIPTAVRAMRASAADF 106 (136)
T ss_dssp HHHHHHHHHTTCCCCEEEEESSC--CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhCCCCCCEEEEEcCC--CHHHHHHHHHcChHHh
Confidence 57888888887888777777654 5666677778887654
No 312
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=32.19 E-value=1e+02 Score=26.64 Aligned_cols=69 Identities=22% Similarity=0.252 Sum_probs=46.4
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCC-CcEEEEecCCCCCChHHHHHHHHcCccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSGLNV 235 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aGld~ 235 (376)
.+++++.+.++++.+.|++.|.|+-. + ++ ..+.|+++++.++ .+.|..-. -. +.+.++...++|+|.
T Consensus 16 ~d~~~~~~~~~~~~~~G~~~i~l~~~---~-~~-----~~~~i~~i~~~~~~~l~vg~g~-~~--~~~~i~~a~~~Gad~ 83 (212)
T 2v82_A 16 ITPDEALAHVGAVIDAGFDAVEIPLN---S-PQ-----WEQSIPAIVDAYGDKALIGAGT-VL--KPEQVDALARMGCQL 83 (212)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEETT---S-TT-----HHHHHHHHHHHHTTTSEEEEEC-CC--SHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCC---C-hh-----HHHHHHHHHHhCCCCeEEEecc-cc--CHHHHHHHHHcCCCE
Confidence 57889999999999999999988532 1 11 2356666666543 24443211 11 567899999999997
Q ss_pred cc
Q 017179 236 FA 237 (376)
Q Consensus 236 i~ 237 (376)
+.
T Consensus 84 V~ 85 (212)
T 2v82_A 84 IV 85 (212)
T ss_dssp EE
T ss_pred EE
Confidence 73
No 313
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=31.78 E-value=1.8e+02 Score=26.65 Aligned_cols=169 Identities=12% Similarity=0.122 Sum_probs=93.5
Q ss_pred CchhHHHHHHHHHHCCCc-EEEEEeee----C-CCCCcccHHHHHHHHHHHHhhC--CCcEEEEecCCCCCChH----HH
Q 017179 158 DPDEPTNVAEAIASWGLD-YVVITSVD----R-DDLADQGSGHFAQTVRKLKELK--PNMLIEALVPDFRGNNG----CV 225 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~-eIvLTsg~----r-~dl~d~g~~~~~elvr~Ik~~~--p~i~Ie~l~pd~~g~~e----~l 225 (376)
++++..+.++.+.+.|++ .|.|.-+. + +++. +..+.+.++++++++.. | +.+. +.|++ +.+ ..
T Consensus 104 ~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g-~~~e~~~~iv~~vr~~~~~P-v~vK-i~~~~--~~~~~~~~a 178 (311)
T 1jub_A 104 SAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLA-YDFEATEKLLKEVFTFFTKP-LGVK-LPPYF--DLVHFDIMA 178 (311)
T ss_dssp SHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGG-GCHHHHHHHHHHHTTTCCSC-EEEE-ECCCC--SHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCccccc-CCHHHHHHHHHHHHHhcCCC-EEEE-ECCCC--CHHHHHHHH
Confidence 578899999999999999 88875431 1 1221 12566789999998764 3 3444 45655 332 35
Q ss_pred HHHHHcCcccccc-c-------ccch-HHH-HH---h---hcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCC
Q 017179 226 REVAKSGLNVFAH-N-------IETV-EEL-QS---A---VRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GET 288 (376)
Q Consensus 226 ~~L~~aGld~i~h-~-------lEtv-~~l-~~---~---vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET 288 (376)
+.+.++|+|.+.. | ++.. ... .. . +. ........++.++.+++..+..++ +|..- -.|
T Consensus 179 ~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~s-g~~~~~~~~~~i~~v~~~~~~~ip----vi~~GGI~~ 253 (311)
T 1jub_A 179 EILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIG-GAYIKPTALANVRAFYTRLKPEIQ----IIGTGGIET 253 (311)
T ss_dssp HHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEE-SGGGHHHHHHHHHHHHTTSCTTSE----EEEESSCCS
T ss_pred HHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccc-cccccHHHHHHHHHHHHhcCCCCC----EEEECCCCC
Confidence 7778889886532 1 2200 000 00 0 00 011234557888888875432233 33333 468
Q ss_pred HHHHHHHHHHHHHcCCcEEEeecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhh
Q 017179 289 PDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYV 346 (376)
Q Consensus 289 ~ee~~e~L~~Lrel~vd~v~~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~ 346 (376)
.+|..+.+. .+.|.|-++.-+ ..+-| .+..+-.+.+..+....||..+
T Consensus 254 ~~da~~~l~----~GAd~V~vg~~~---l~~~p---~~~~~i~~~l~~~l~~~g~~si 301 (311)
T 1jub_A 254 GQDAFEHLL----CGATMLQIGTAL---HKEGP---AIFDRIIKELEEIMNQKGYQSI 301 (311)
T ss_dssp HHHHHHHHH----HTCSEEEECHHH---HHHCT---HHHHHHHHHHHHHHHHHTCCSG
T ss_pred HHHHHHHHH----cCCCEEEEchHH---HhcCc---HHHHHHHHHHHHHHHHcCCCCH
Confidence 888888773 589999887322 10011 1111223445556666777654
No 314
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=31.77 E-value=3.1e+02 Score=25.27 Aligned_cols=134 Identities=13% Similarity=0.133 Sum_probs=69.1
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCC-Ccc-cHHHHHHHHHHHHhhCCCcEE--EEec----CCCCCChH----H
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDL-ADQ-GSGHFAQTVRKLKELKPNMLI--EALV----PDFRGNNG----C 224 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl-~d~-g~~~~~elvr~Ik~~~p~i~I--e~l~----pd~~g~~e----~ 224 (376)
-+.+|+...++.+...|++-|-+ |-|+ .+. ..+.+.+.++.|++..+++.| .+=+ +.+.++++ .
T Consensus 49 ~~~~e~~~~~~~~~~~gaD~VEl----RvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~l 124 (276)
T 3o1n_A 49 KTITDVKSEALAYREADFDILEW----RVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDL 124 (276)
T ss_dssp SSHHHHHHHHHHHTTSCCSEEEE----EGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHhhCCCCEEEE----EeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCCHHHHHHH
Confidence 35788888888887788876654 2233 221 135688888888876533322 1111 12323333 3
Q ss_pred HHHHHHcC-cccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCce-EEEeEEEecCCCHHHHHHHHHHHHHc
Q 017179 225 VREVAKSG-LNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTL-TKTSIMLGCGETPDQVVSTMEKVRAA 302 (376)
Q Consensus 225 l~~L~~aG-ld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~-tkt~imvGlGET~ee~~e~L~~Lrel 302 (376)
++.+.+.| +|.+..-+...+ +..-++++.+++ .|.+ +-|.--+.-.-+.+++.+.+..+.++
T Consensus 125 l~~~l~~g~~dyIDvEl~~~~-------------~~~~~l~~~a~~---~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~ 188 (276)
T 3o1n_A 125 NRAAVDSGLVDMIDLELFTGD-------------DEVKATVGYAHQ---HNVAVIMSNHDFHKTPAAEEIVQRLRKMQEL 188 (276)
T ss_dssp HHHHHHHTCCSEEEEEGGGCH-------------HHHHHHHHHHHH---TTCEEEEEEEESSCCCCHHHHHHHHHHHHHT
T ss_pred HHHHHhcCCCCEEEEECcCCH-------------HHHHHHHHHHHh---CCCEEEEEeecCCCCcCHHHHHHHHHHHHHc
Confidence 44444555 555544322212 222344455555 2222 12221111122356777777777777
Q ss_pred CCcEEEee
Q 017179 303 GVDVMTFG 310 (376)
Q Consensus 303 ~vd~v~~~ 310 (376)
|.|++-|.
T Consensus 189 GaDIvKia 196 (276)
T 3o1n_A 189 GADIPKIA 196 (276)
T ss_dssp TCSEEEEE
T ss_pred CCCEEEEE
Confidence 77777775
No 315
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=31.75 E-value=3.4e+02 Score=25.81 Aligned_cols=148 Identities=10% Similarity=0.025 Sum_probs=79.6
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhC-CCcEEEEecCCCCC--ChH----HHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRG--NNG----CVREVA 229 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~-p~i~Ie~l~pd~~g--~~e----~l~~L~ 229 (376)
.++++..+.++.+.+.|++.+-|=.|.. + .+.-.+.|++|++.. |++.+.+ |.++ +.+ .++.|.
T Consensus 164 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~-~-----~~~~~e~v~avr~a~g~~~~l~v---Dan~~~~~~~a~~~~~~l~ 234 (392)
T 1tzz_A 164 KGLSMLRGEMRGYLDRGYNVVKMKIGGA-P-----IEEDRMRIEAVLEEIGKDAQLAV---DANGRFNLETGIAYAKMLR 234 (392)
T ss_dssp -CHHHHHHHHHHHHTTTCSEEEEECSSS-C-----HHHHHHHHHHHHHHHTTTCEEEE---ECTTCCCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCC-C-----HHHHHHHHHHHHHhcCCCCeEEE---ECCCCCCHHHHHHHHHHHH
Confidence 4688888889988899999988765531 1 344578888888865 5666553 2221 322 233333
Q ss_pred HcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHc----CCc
Q 017179 230 KSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAA----GVD 305 (376)
Q Consensus 230 ~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel----~vd 305 (376)
+.|++. +|- - +. ..+ ++.++.+++.. +++ |+ .+|+.....+..+.+.+- .+|
T Consensus 235 ~~~i~~----iEq---P---~~--~~d----~~~~~~l~~~~--~iP----Ia--~dE~~~~~~~~~~~i~~~~~~~~~d 290 (392)
T 1tzz_A 235 DYPLFW----YEE---V---GD--PLD----YALQAALAEFY--PGP----MA--TGENLFSHQDARNLLRYGGMRPDRD 290 (392)
T ss_dssp TSCCSE----EEC---C---SC--TTC----HHHHHHHTTTC--CSC----EE--ECTTCCSHHHHHHHHHHSCCCTTTC
T ss_pred HcCCCe----ecC---C---CC--hhh----HHHHHHHHhhC--CCC----EE--ECCCCCCHHHHHHHHHcCCCccCCc
Confidence 334332 231 0 11 122 34444444421 122 32 345444444444455555 577
Q ss_pred EEEeecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhh---hhcc
Q 017179 306 VMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFR---YVAS 348 (376)
Q Consensus 306 ~v~~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~---~~~s 348 (376)
++.+- |.+-+- ..+..++..+|.+.|.. .+.+
T Consensus 291 ~v~ik----~~~~GG-------it~~~~i~~~A~~~gi~~~~~~~~ 325 (392)
T 1tzz_A 291 WLQFD----CALSYG-------LCEYQRTLEVLKTHGWSPSRCIPH 325 (392)
T ss_dssp EECCC----TTTTTC-------HHHHHHHHHHHHHTTCCGGGBCCS
T ss_pred EEEEC----ccccCC-------HHHHHHHHHHHHHCCCCCceEeec
Confidence 77552 321111 34667778888888887 5555
No 316
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=31.64 E-value=90 Score=28.02 Aligned_cols=107 Identities=16% Similarity=0.285 Sum_probs=60.5
Q ss_pred CCCCCchhHHHHH-HHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEec--CCCCC------ChHH
Q 017179 154 PPPPDPDEPTNVA-EAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALV--PDFRG------NNGC 224 (376)
Q Consensus 154 ~~~l~~eEi~~~a-~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~--pd~~g------~~e~ 224 (376)
|..-..++.++.| +.+.+.|+++||+-|-... .+..+++ ...+ .|-+.+ ..|.. ++|.
T Consensus 31 ~G~eNT~~tl~la~era~e~~Ik~iVVASssG~-----TA~k~~e-------~~~~-~lVvVTh~~GF~~pg~~e~~~e~ 97 (206)
T 1t57_A 31 PGKENTERVLELVGERADQLGIRNFVVASVSGE-----TALRLSE-------MVEG-NIVSVTHHAGFREKGQLELEDEA 97 (206)
T ss_dssp CSGGGHHHHHHHHHHHHHHHTCCEEEEECSSSH-----HHHHHHT-------TCCS-EEEEECCCTTSSSTTCCSSCHHH
T ss_pred CCcccHHHHHHHHHHHHHHcCCCEEEEEeCCCH-----HHHHHHH-------HccC-CEEEEeCcCCCCCCCCCcCCHHH
Confidence 3444556666655 5567889999999875321 1212222 1123 333333 12221 6899
Q ss_pred HHHHHHcCccccc--ccccchH-HHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEE
Q 017179 225 VREVAKSGLNVFA--HNIETVE-ELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTK 278 (376)
Q Consensus 225 l~~L~~aGld~i~--h~lEtv~-~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tk 278 (376)
.+.|.+.|..++. |.+..++ .+.++.. +.+. .++|..+.+.+..|++|+
T Consensus 98 ~~~L~~~G~~V~t~tH~lsG~eR~is~kfG--G~~p---~eiiA~tLR~fgqG~KV~ 149 (206)
T 1t57_A 98 RDALLERGVNVYAGSHALSGVGRGISNRFG--GVTP---VEIMAETLRMVSQGFKVC 149 (206)
T ss_dssp HHHHHHHTCEEECCSCTTTTHHHHHHHHHC--SCCH---HHHHHHHHTTTCHHHHHH
T ss_pred HHHHHhCCCEEEEeeccccchhHHHHHhcC--CCCH---HHHHHHHHHHhCCCceEE
Confidence 9999999999984 4466777 5555554 3333 345555555555565543
No 317
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=31.60 E-value=74 Score=28.96 Aligned_cols=71 Identities=10% Similarity=0.148 Sum_probs=42.3
Q ss_pred hhHHHHHHHHHHCCCcEEEEEeeeCCC--CCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHH-HcCcccc
Q 017179 160 DEPTNVAEAIASWGLDYVVITSVDRDD--LADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVA-KSGLNVF 236 (376)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsg~r~d--l~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~-~aGld~i 236 (376)
.++.+..+.+.++|++.|+ |||-... .. .|.+.+.+++++ ..+ +|+++.+-=. +.+.+..+. ..|++.+
T Consensus 133 ~d~~~ale~L~~lGv~rIL-TSG~~~~~~a~-~g~~~L~~Lv~~---a~~--ri~Im~GgGV-~~~Ni~~l~~~tGv~e~ 204 (224)
T 2bdq_A 133 SDQKKSIDQLVALGFTRIL-LHGSSNGEPII-ENIKHIKALVEY---ANN--RIEIMVGGGV-TAENYQYICQETGVKQA 204 (224)
T ss_dssp TTHHHHHHHHHHTTCCEEE-ECSCSSCCCGG-GGHHHHHHHHHH---HTT--SSEEEECSSC-CTTTHHHHHHHHTCCEE
T ss_pred cCHHHHHHHHHHcCCCEEE-CCCCCCCCcHH-HHHHHHHHHHHh---hCC--CeEEEeCCCC-CHHHHHHHHHhhCCCEE
Confidence 4456678889999999986 8876544 33 356666666543 222 3444543211 344566665 5788766
Q ss_pred cc
Q 017179 237 AH 238 (376)
Q Consensus 237 ~h 238 (376)
..
T Consensus 205 H~ 206 (224)
T 2bdq_A 205 HG 206 (224)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 318
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=31.57 E-value=1.9e+02 Score=27.89 Aligned_cols=149 Identities=14% Similarity=0.105 Sum_probs=84.0
Q ss_pred CCchhHHHHHHHHHHC-CCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhC-CCcEEEEecCCCCC--ChH----HHHHH
Q 017179 157 PDPDEPTNVAEAIASW-GLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRG--NNG----CVREV 228 (376)
Q Consensus 157 l~~eEi~~~a~al~~~-G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~-p~i~Ie~l~pd~~g--~~e----~l~~L 228 (376)
.++++..+.++++.+. |++.+-|=-|.. + .+.=.+.|++|++.. |++.+.+ |.++ +.+ .++.|
T Consensus 166 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~-~-----~~~d~~~v~avR~a~G~~~~l~v---DaN~~~~~~~A~~~~~~l 236 (383)
T 3toy_A 166 LDARDDERTLRTACDEHGFRAIKSKGGHG-D-----LATDEAMIKGLRALLGPDIALML---DFNQSLDPAEATRRIARL 236 (383)
T ss_dssp CCHHHHHHHHHHHHHTSCCCEEEEECCSS-C-----HHHHHHHHHHHHHHHCTTSEEEE---ECTTCSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHccCCcEEEEecCCC-C-----HHHHHHHHHHHHHHhCCCCeEEE---eCCCCCCHHHHHHHHHHH
Confidence 4688999999998888 999998864421 1 233467888888875 6665543 2211 222 33444
Q ss_pred HHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEE
Q 017179 229 AKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMT 308 (376)
Q Consensus 229 ~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~ 308 (376)
.+.|++. +|- - +. ..+++ .++.+++.. +++ |-.||+.....+..+.++.-.+|++.
T Consensus 237 ~~~~i~~----iEe---P---~~--~~d~~----~~~~l~~~~--~iP------Ia~dE~~~~~~~~~~~i~~~a~d~v~ 292 (383)
T 3toy_A 237 ADYDLTW----IEE---P---VP--QENLS----GHAAVRERS--EIP------IQAGENWWFPRGFAEAIAAGASDFIM 292 (383)
T ss_dssp GGGCCSE----EEC---C---SC--TTCHH----HHHHHHHHC--SSC------EEECTTCCHHHHHHHHHHHTCCSEEC
T ss_pred HhhCCCE----EEC---C---CC--cchHH----HHHHHHhhc--CCC------EEeCCCcCCHHHHHHHHHcCCCCEEE
Confidence 4444332 231 0 11 22333 344444421 233 23467766666666667777788776
Q ss_pred eecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhccc
Q 017179 309 FGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASG 349 (376)
Q Consensus 309 ~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sg 349 (376)
+- +.+ +-. -.+...+..+|++.|...+..+
T Consensus 293 ik----~~~----~GG---it~~~~ia~~A~~~gi~~~~h~ 322 (383)
T 3toy_A 293 PD----LMK----VGG---ITGWLNVAGQADAASIPMSSHI 322 (383)
T ss_dssp CC----TTT----TTH---HHHHHHHHHHHHHHTCCBCCCS
T ss_pred eC----ccc----cCC---HHHHHHHHHHHHHcCCEEeecC
Confidence 52 211 111 2356677778888888765544
No 319
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=31.43 E-value=1.2e+02 Score=28.64 Aligned_cols=61 Identities=16% Similarity=0.239 Sum_probs=41.2
Q ss_pred HHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 165 VAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 165 ~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
.++++.+.|++.|.|-. .. .+.+.+.++.+ .+++.|+++- .. +++.+..+.+.|+|.+..+
T Consensus 221 e~~eAl~aGaD~I~LDn-----~~---~~~l~~av~~i---~~~v~ieaSG-GI--~~~~i~~~a~tGVD~isvG 281 (298)
T 3gnn_A 221 QLRTALAHGARSVLLDN-----FT---LDMMRDAVRVT---EGRAVLEVSG-GV--NFDTVRAIAETGVDRISIG 281 (298)
T ss_dssp HHHHHHHTTCEEEEEES-----CC---HHHHHHHHHHH---TTSEEEEEES-SC--STTTHHHHHHTTCSEEECG
T ss_pred HHHHHHHcCCCEEEECC-----CC---HHHHHHHHHHh---CCCCeEEEEc-CC--CHHHHHHHHHcCCCEEEEC
Confidence 45556678998887732 11 34455666555 4678887544 33 6778999999999998654
No 320
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=31.28 E-value=1.9e+02 Score=23.47 Aligned_cols=72 Identities=13% Similarity=0.086 Sum_probs=40.7
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCC-CcEEEEecCC--CCC--C-hHHHHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPD--FRG--N-NGCVREVAK 230 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p-~i~Ie~l~pd--~~g--~-~e~l~~L~~ 230 (376)
.+++++.+ ++.+.+.+-|.|++-.... ...+.++++.|++..+ ++.| +.+. +.. + .+.-+.+++
T Consensus 41 ~p~e~~v~---~a~~~~~d~v~lS~~~~~~-----~~~~~~~i~~l~~~g~~~i~v--~vGG~~~~~~~~~~~~~~~~~~ 110 (137)
T 1ccw_A 41 SPQELFIK---AAIETKADAILVSSLYGQG-----EIDCKGLRQKCDEAGLEGILL--YVGGNIVVGKQHWPDVEKRFKD 110 (137)
T ss_dssp ECHHHHHH---HHHHHTCSEEEEEECSSTH-----HHHHTTHHHHHHHTTCTTCEE--EEEESCSSSSCCHHHHHHHHHH
T ss_pred CCHHHHHH---HHHhcCCCEEEEEecCcCc-----HHHHHHHHHHHHhcCCCCCEE--EEECCCcCchHhhhhhHHHHHH
Confidence 44555544 4456678888887754321 3456677888877643 3433 2221 111 1 222456888
Q ss_pred cCcccccc
Q 017179 231 SGLNVFAH 238 (376)
Q Consensus 231 aGld~i~h 238 (376)
+|+|.+-+
T Consensus 111 ~G~d~~~~ 118 (137)
T 1ccw_A 111 MGYDRVYA 118 (137)
T ss_dssp TTCSEECC
T ss_pred CCCCEEEC
Confidence 99887755
No 321
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=31.27 E-value=2.5e+02 Score=26.82 Aligned_cols=145 Identities=14% Similarity=0.120 Sum_probs=81.3
Q ss_pred CchhHHHHHHHHHHC-CCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCC-CcEEEEecCCCCC--Ch----HHHHHHH
Q 017179 158 DPDEPTNVAEAIASW-GLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRG--NN----GCVREVA 229 (376)
Q Consensus 158 ~~eEi~~~a~al~~~-G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p-~i~Ie~l~pd~~g--~~----e~l~~L~ 229 (376)
++++..+.++...+. |++.+-|=-|.. + .+.-.+.|++|++..| ++.+.+ |.++ +. +.++.|.
T Consensus 148 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~----~--~~~d~~~v~avR~a~g~~~~l~v---Dan~~~~~~~A~~~~~~l~ 218 (383)
T 3i4k_A 148 PLDVAVAEIEERIEEFGNRSFKLKMGAG----D--PAEDTRRVAELAREVGDRVSLRI---DINARWDRRTALHYLPILA 218 (383)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCSS----C--HHHHHHHHHHHHHTTTTTSEEEE---ECTTCSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEeeCCC----C--HHHHHHHHHHHHHHcCCCCEEEE---ECCCCCCHHHHHHHHHHHH
Confidence 578888888877776 999998854421 1 3445788999998864 455433 2221 22 2345555
Q ss_pred HcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 230 KSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 230 ~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
+.|++.+ |- -+. ..++ +.++.+++.. +++ +-.||+.....+..+.++.-.+|++.+
T Consensus 219 ~~~i~~i----Eq------P~~--~~d~----~~~~~l~~~~--~iP------Ia~dE~~~~~~~~~~~i~~~~~d~v~~ 274 (383)
T 3i4k_A 219 EAGVELF----EQ------PTP--ADDL----ETLREITRRT--NVS------VMADESVWTPAEALAVVKAQAADVIAL 274 (383)
T ss_dssp HTTCCEE----ES------CSC--TTCH----HHHHHHHHHH--CCE------EEESTTCSSHHHHHHHHHHTCCSEEEE
T ss_pred hcCCCEE----EC------CCC--hhhH----HHHHHHHhhC--CCC------EEecCccCCHHHHHHHHHcCCCCEEEE
Confidence 6555443 21 011 2232 3333444321 133 234566666666666667777888877
Q ss_pred ecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhh
Q 017179 310 GQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYV 346 (376)
Q Consensus 310 ~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~ 346 (376)
- +.+-+- ..+...+..+|...|...+
T Consensus 275 k----~~~~GG-------it~~~~ia~~A~~~gi~~~ 300 (383)
T 3i4k_A 275 K----TTKHGG-------LLESKKIAAIAEAGGLACH 300 (383)
T ss_dssp C----TTTTTS-------HHHHHHHHHHHHHTTCEEE
T ss_pred c----ccccCC-------HHHHHHHHHHHHHcCCeEE
Confidence 3 322221 3456677777888777654
No 322
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=31.15 E-value=4e+02 Score=26.37 Aligned_cols=117 Identities=13% Similarity=0.087 Sum_probs=60.4
Q ss_pred ecCCCCCCh----HHHHHHHHcCcccccc-c--ccchH-HHHHhhcCCCCC----HHHHHHHHHHHHHhCCCCceEEEeE
Q 017179 214 LVPDFRGNN----GCVREVAKSGLNVFAH-N--IETVE-ELQSAVRDHRAN----FKQSLDVLMMAKDYVPAGTLTKTSI 281 (376)
Q Consensus 214 l~pd~~g~~----e~l~~L~~aGld~i~h-~--lEtv~-~l~~~vr~r~~t----~e~~L~vl~~ak~~~p~Gi~tkt~i 281 (376)
+.|++ +. +..+.+.++|+|.+.. | ....+ +-+.... .+.+ +...+++++.+++..+..+++ |
T Consensus 304 ispd~--~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~-GGlSG~~~~~~sl~~i~~v~~~v~~~iPV---I 377 (443)
T 1tv5_A 304 LAPDL--NQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKK-GGVSGAKLKDISTKFICEMYNYTNKQIPI---I 377 (443)
T ss_dssp ECSCC--CHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCC-SEEEEHHHHHHHHHHHHHHHHHTTTCSCE---E
T ss_pred eCCCC--CHHHHHHHHHHHHHcCCCEEEEECCCccccccccccccc-CCcCCCcchHHHHHHHHHHHHHcCCCCcE---E
Confidence 56666 32 3467788899996632 2 11101 0000000 1111 445688888888865322432 2
Q ss_pred EEecCCCHHHHHHHHHHHHHcCCcEEEeecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhh
Q 017179 282 MLGCGETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYV 346 (376)
Q Consensus 282 mvGlGET~ee~~e~L~~Lrel~vd~v~~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~ 346 (376)
-+|=-.|.+|..+.|. .|.|.|-++.-+ ..+-| ++..+-.+.+..+....||..+
T Consensus 378 g~GGI~s~~DA~e~l~----aGAd~Vqigral---l~~gP---~l~~~i~~~l~~~l~~~G~~si 432 (443)
T 1tv5_A 378 ASGGIFSGLDALEKIE----AGASVCQLYSCL---VFNGM---KSAVQIKRELNHLLYQRGYYNL 432 (443)
T ss_dssp EESSCCSHHHHHHHHH----TTEEEEEESHHH---HHHGG---GHHHHHHHHHHHHHHHHTCSSS
T ss_pred EECCCCCHHHHHHHHH----cCCCEEEEcHHH---HhcCh---HHHHHHHHHHHHHHHHhCCCCH
Confidence 2233479999888874 688888876221 00011 1112223445556666777655
No 323
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=30.78 E-value=25 Score=30.73 Aligned_cols=45 Identities=22% Similarity=0.344 Sum_probs=31.3
Q ss_pred HHHHHHHCCCcEEEEEeeeCCCCCcccHH-HHHHHHHHHHhhCCCcEEEEecC
Q 017179 165 VAEAIASWGLDYVVITSVDRDDLADQGSG-HFAQTVRKLKELKPNMLIEALVP 216 (376)
Q Consensus 165 ~a~al~~~G~~eIvLTsg~r~dl~d~g~~-~~~elvr~Ik~~~p~i~Ie~l~p 216 (376)
....+.+.|+..+ |+||.. |++ .+++++..+|+.+|++.+.+++|
T Consensus 35 ~l~~l~~~G~~~~-isgga~------G~D~~aae~vl~lk~~y~~i~L~~v~P 80 (181)
T 2nx2_A 35 RLIAFLDEGLEWI-LISGQL------GVELWAAEAAYDLQEEYPDLKVAVITP 80 (181)
T ss_dssp HHHHHHTTTCCEE-EECCCT------THHHHHHHHHHTTTTTCTTCEEEEEES
T ss_pred HHHHHHhCCCcEE-EECCCc------cHHHHHHHHHHHhccccCCceEEEEec
Confidence 3444446688654 555532 233 47888888988899999999999
No 324
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=30.69 E-value=1.8e+02 Score=22.20 Aligned_cols=39 Identities=15% Similarity=0.297 Sum_probs=27.5
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++.|++..|.+.|-+++... +.+......++|++.|
T Consensus 63 ~~~~~~l~~~~~~~pii~ls~~~--~~~~~~~~~~~g~~~~ 101 (142)
T 2qxy_A 63 LNLIRRIREEFPDTKVAVLSAYV--DKDLIINSVKAGAVDY 101 (142)
T ss_dssp HHHHHHHHHHCTTCEEEEEESCC--CHHHHHHHHHHTCSCE
T ss_pred HHHHHHHHHHCCCCCEEEEECCC--CHHHHHHHHHCCccee
Confidence 56788888878877777777654 5566677777786644
No 325
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=30.61 E-value=3.2e+02 Score=26.32 Aligned_cols=151 Identities=17% Similarity=0.158 Sum_probs=80.9
Q ss_pred CchhHHHHH-HHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhC-CCcEEEEecCCCCC--ChH----HHHHHH
Q 017179 158 DPDEPTNVA-EAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRG--NNG----CVREVA 229 (376)
Q Consensus 158 ~~eEi~~~a-~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~-p~i~Ie~l~pd~~g--~~e----~l~~L~ 229 (376)
+++++.+.+ +.+.+.|++.+-|--|..........+.-.+.|++|++.. |++.+.+ |.++ +.+ .++.|.
T Consensus 139 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~v---DaN~~~~~~~A~~~~~~L~ 215 (393)
T 4dwd_A 139 SVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGF---DANNGYSVGGAIRVGRALE 215 (393)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCTTCCEEE---ECTTCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCCCCeEEE---ECCCCCCHHHHHHHHHHHH
Confidence 478888888 8888899999988654311000012445578888998875 5554432 2221 222 344555
Q ss_pred HcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 230 KSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 230 ~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
+.|++.+ |- -+. ..+ ++.++.+++.. +++ +-.||+.....+..+.++.- +|++.+
T Consensus 216 ~~~i~~i----Eq------P~~--~~d----~~~~~~l~~~~--~iP------Ia~dE~~~~~~~~~~~i~~~-~d~v~~ 270 (393)
T 4dwd_A 216 DLGYSWF----EE------PVQ--HYH----VGAMGEVAQRL--DIT------VSAGEQTYTLQALKDLILSG-VRMVQP 270 (393)
T ss_dssp HTTCSEE----EC------CSC--TTC----HHHHHHHHHHC--SSE------EEBCTTCCSHHHHHHHHHHT-CCEECC
T ss_pred hhCCCEE----EC------CCC--ccc----HHHHHHHHhhC--CCC------EEecCCcCCHHHHHHHHHcC-CCEEEe
Confidence 5554433 21 011 123 34444555421 232 33456655555555555666 887765
Q ss_pred ecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhc
Q 017179 310 GQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVA 347 (376)
Q Consensus 310 ~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~ 347 (376)
- +.+-+ . ..+...+..+|...|...+.
T Consensus 271 k----~~~~G----G---it~~~~ia~~A~~~gi~~~~ 297 (393)
T 4dwd_A 271 D----IVKMG----G---ITGMMQCAALAHAHGVEFVP 297 (393)
T ss_dssp C----TTTTT----H---HHHHHHHHHHHHHHTCEECC
T ss_pred C----ccccC----C---HHHHHHHHHHHHHcCCEEee
Confidence 2 22111 1 33566777778888776653
No 326
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=30.56 E-value=99 Score=28.30 Aligned_cols=78 Identities=14% Similarity=0.097 Sum_probs=47.3
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeC-----C-CC-C-----cc---cH---HHHHHHHHHHHhhCCCcEEEEecCCCCC
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDR-----D-DL-A-----DQ---GS---GHFAQTVRKLKELKPNMLIEALVPDFRG 220 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r-----~-dl-~-----d~---g~---~~~~elvr~Ik~~~p~i~Ie~l~pd~~g 220 (376)
..++.+.++.+.+.|++.|++++... . .. + .+ |. ....++++.+++.. ++.|-+ .+...
T Consensus 175 ~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~-~ipvia-~GGI~- 251 (311)
T 1ep3_A 175 VTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV-DIPIIG-MGGVA- 251 (311)
T ss_dssp SSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC-SSCEEE-CSSCC-
T ss_pred hHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc-CCCEEE-ECCcC-
Confidence 34566778888999999999976320 0 00 0 01 11 12357788887754 344332 23332
Q ss_pred ChHHHHHHHHcCccccccc
Q 017179 221 NNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 221 ~~e~l~~L~~aGld~i~h~ 239 (376)
+.+.+..+.++|+|.+..+
T Consensus 252 ~~~d~~~~l~~GAd~V~vg 270 (311)
T 1ep3_A 252 NAQDVLEMYMAGASAVAVG 270 (311)
T ss_dssp SHHHHHHHHHHTCSEEEEC
T ss_pred CHHHHHHHHHcCCCEEEEC
Confidence 5677788888999987664
No 327
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=30.35 E-value=2.5e+02 Score=26.83 Aligned_cols=88 Identities=15% Similarity=0.252 Sum_probs=51.3
Q ss_pred HHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCC
Q 017179 195 FAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAG 274 (376)
Q Consensus 195 ~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~G 274 (376)
+.+.+++.++..|...|++.... .+.+++..++|+|++-. ++ -+.++.-++++.+.. .
T Consensus 218 i~~Av~~ar~~~p~~kIeVEVdt----ldea~eAl~aGaD~I~L--Dn------------~~~~~l~~av~~l~~---~- 275 (320)
T 3paj_A 218 IRQAISTAKQLNPGKPVEVETET----LAELEEAISAGADIIML--DN------------FSLEMMREAVKINAG---R- 275 (320)
T ss_dssp HHHHHHHHHHHSTTSCEEEEESS----HHHHHHHHHTTCSEEEE--ES------------CCHHHHHHHHHHHTT---S-
T ss_pred HHHHHHHHHHhCCCCeEEEEECC----HHHHHHHHHcCCCEEEE--CC------------CCHHHHHHHHHHhCC---C-
Confidence 45677888888888777777654 36677777889987633 22 223333333333221 1
Q ss_pred ceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecC
Q 017179 275 TLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (376)
Q Consensus 275 i~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY 312 (376)
+.+-.+ =|-|. +.+..+.+.|+|++.+|..
T Consensus 276 v~ieaS----GGIt~----~~I~~~a~tGVD~isvGal 305 (320)
T 3paj_A 276 AALENS----GNITL----DNLKECAETGVDYISVGAL 305 (320)
T ss_dssp SEEEEE----SSCCH----HHHHHHHTTTCSEEECTHH
T ss_pred CeEEEE----CCCCH----HHHHHHHHcCCCEEEECce
Confidence 222111 13354 4455667899999999753
No 328
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=29.99 E-value=83 Score=30.43 Aligned_cols=67 Identities=10% Similarity=0.111 Sum_probs=45.0
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcC-ccccc
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG-LNVFA 237 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG-ld~i~ 237 (376)
.++....++++.+.|+.+|.++++... . +.++.||+..+. .| +..+.+ +.+..+.+.+.| +|.+.
T Consensus 249 ~~~~~~la~~l~~~Gvd~i~v~~~~~~------~----~~~~~ik~~~~i-Pv-i~~Ggi--t~e~a~~~l~~G~aD~V~ 314 (361)
T 3gka_A 249 AATFGHVARELGRRRIAFLFARESFGG------D----AIGQQLKAAFGG-PF-IVNENF--TLDSAQAALDAGQADAVA 314 (361)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCST------T----CCHHHHHHHHCS-CE-EEESSC--CHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCC------H----HHHHHHHHHcCC-CE-EEeCCC--CHHHHHHHHHcCCccEEE
Confidence 466788999999999999999987511 1 234555554432 22 133455 677788888777 88877
Q ss_pred cc
Q 017179 238 HN 239 (376)
Q Consensus 238 h~ 239 (376)
.+
T Consensus 315 iG 316 (361)
T 3gka_A 315 WG 316 (361)
T ss_dssp ES
T ss_pred EC
Confidence 65
No 329
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=29.97 E-value=3.7e+02 Score=25.60 Aligned_cols=173 Identities=13% Similarity=0.104 Sum_probs=95.0
Q ss_pred CchhHHHHHHHHHHCCCc-EEEEEee--eCCCCCcc--cHHHHHHHHHHHHhhCC-CcEEEEecCCCCCChHHHHHHHHc
Q 017179 158 DPDEPTNVAEAIASWGLD-YVVITSV--DRDDLADQ--GSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKS 231 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~-eIvLTsg--~r~dl~d~--g~~~~~elvr~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~a 231 (376)
++++..+.++.+.+.|+. +|.|--+ +.+...+. ..+.+.++++++++... -+.|. +.|++ ...+..+.+.++
T Consensus 139 ~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vK-i~p~~-~~~~~a~~~~~a 216 (345)
T 3oix_A 139 SPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIK-LPPYF-DIVHFDQAAAIF 216 (345)
T ss_dssp SHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEE-ECCCC-CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEE-ECCCC-CHHHHHHHHHHh
Confidence 478999999999888986 7776433 22211111 25678999999987641 14444 45665 124444555556
Q ss_pred Ccccccc-c----------ccchH-HH-----HHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHH
Q 017179 232 GLNVFAH-N----------IETVE-EL-----QSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVS 294 (376)
Q Consensus 232 Gld~i~h-~----------lEtv~-~l-----~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e 294 (376)
|.+.+.. | +++-. .+ +.-+. ....+...++.+..+++..+..+++ |..|=-.|.+|..+
T Consensus 217 ga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlS-G~ai~p~a~~~v~~i~~~~~~~ipI---Ig~GGI~s~~da~~ 292 (345)
T 3oix_A 217 NXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIG-GDYVKPTALANVHAFYKRLNPSIQI---IGTGGVXTGRDAFE 292 (345)
T ss_dssp TTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEE-EGGGHHHHHHHHHHHHTTSCTTSEE---EEESSCCSHHHHHH
T ss_pred CCCceEEEEeecccccceeeccCccccccccccCCcC-CccccHHHHHHHHHHHHHcCCCCcE---EEECCCCChHHHHH
Confidence 6654421 0 22100 00 00012 1344666789999998865422432 22333588999888
Q ss_pred HHHHHHHcCCcEEEeecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhh
Q 017179 295 TMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYV 346 (376)
Q Consensus 295 ~L~~Lrel~vd~v~~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~ 346 (376)
.+. .|.|.|-++.-+ . .+-| ++..+-.+.+..+....||..+
T Consensus 293 ~l~----aGAd~V~igra~--~-~~gP---~~~~~i~~~L~~~l~~~G~~si 334 (345)
T 3oix_A 293 HIL----CGASMVQIGTAL--H-QEGP---QIFKRITKELXAIMTEKGYETL 334 (345)
T ss_dssp HHH----HTCSEEEESHHH--H-HHCT---HHHHHHHHHHHHHHHHHTCCSG
T ss_pred HHH----hCCCEEEEChHH--H-hcCh---HHHHHHHHHHHHHHHHcCCCCH
Confidence 774 588988886321 0 0011 1112234445555566777655
No 330
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=29.59 E-value=3.1e+02 Score=24.55 Aligned_cols=138 Identities=12% Similarity=0.078 Sum_probs=66.6
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCC-CcccHHHHHHHHHHHHhhCCCcEEEE-e-c----CCCCCChHHHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDL-ADQGSGHFAQTVRKLKELKPNMLIEA-L-V----PDFRGNNGCVREVA 229 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl-~d~g~~~~~elvr~Ik~~~p~i~Ie~-l-~----pd~~g~~e~l~~L~ 229 (376)
.+.+|+...++.+.+.|.+-|-+ |-|+ .+...+.+.+.++.|++..+.+.|=+ + + +.+.++++....+.
T Consensus 14 ~~~~e~~~~~~~~~~~~~D~vEl----RvD~l~~~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll 89 (238)
T 1sfl_A 14 LSIEETLIQKINHRIDAIDVLEL----RIDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNLI 89 (238)
T ss_dssp C---CHHHHHHHHTTTTCSEEEE----ECTTSTTCCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHhhhcCCCEEEE----EecccccCCHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCCHHHHHHHH
Confidence 35688888888888888766544 2233 22225667778888876543333311 1 1 12333444333333
Q ss_pred HcCcccccccccchH-HHHHhhcCCCCCHHHHHHHHHHHHHhCCCCce-EEEeEEEecCCC--HHHHHHHHHHHHHcCCc
Q 017179 230 KSGLNVFAHNIETVE-ELQSAVRDHRANFKQSLDVLMMAKDYVPAGTL-TKTSIMLGCGET--PDQVVSTMEKVRAAGVD 305 (376)
Q Consensus 230 ~aGld~i~h~lEtv~-~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~-tkt~imvGlGET--~ee~~e~L~~Lrel~vd 305 (376)
..+++. .+.|-++ ++... . .-+...++++.+++ .|.+ +-|.=- |.+| .+++.+.+..+.++|.|
T Consensus 90 ~~~~~~--~~~d~iDvEl~~~-~----~~~~~~~l~~~~~~---~~~kvI~S~Hd--f~~tp~~~el~~~~~~~~~~gaD 157 (238)
T 1sfl_A 90 SDLANI--NGIDMIDIEWQAD-I----DIEKHQRIITHLQQ---YNKEVIISHHN--FESTPPLDELQFIFFKMQKFNPE 157 (238)
T ss_dssp HHGGGC--TTCCEEEEECCTT-S----CHHHHHHHHHHHHH---TTCEEEEEEEE--SSCCCCHHHHHHHHHHHHTTCCS
T ss_pred HHHHHh--CCCCEEEEEccCC-C----ChHHHHHHHHHHHh---cCCEEEEEecC--CCCCcCHHHHHHHHHHHHHcCCC
Confidence 332221 0122222 22100 0 22333456667766 2321 122111 2333 48888888888888888
Q ss_pred EEEee
Q 017179 306 VMTFG 310 (376)
Q Consensus 306 ~v~~~ 310 (376)
++-+.
T Consensus 158 ivKia 162 (238)
T 1sfl_A 158 YVKLA 162 (238)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88886
No 331
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=29.53 E-value=1.7e+02 Score=25.98 Aligned_cols=17 Identities=6% Similarity=0.036 Sum_probs=7.0
Q ss_pred HHHHHHHHHcCCcEEEe
Q 017179 293 VSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 293 ~e~L~~Lrel~vd~v~~ 309 (376)
.+.++..+++|+..|.+
T Consensus 105 ~~~i~~a~~lG~~~v~~ 121 (290)
T 3tva_A 105 KEISDFASWVGCPAIGL 121 (290)
T ss_dssp HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 33344444444444433
No 332
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=29.51 E-value=1.9e+02 Score=27.76 Aligned_cols=50 Identities=14% Similarity=0.155 Sum_probs=34.8
Q ss_pred CchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEE
Q 017179 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA 213 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~ 213 (376)
++++..+.+++..+.|++.+-|=-|.. + .+.-.+.|++|++..|++.+.+
T Consensus 148 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~-~-----~~~d~~~v~avR~a~~~~~l~v 197 (385)
T 3i6e_A 148 DFDADIALMERLRADGVGLIKLKTGFR-D-----HAFDIMRLELIARDFPEFRVRV 197 (385)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECSSS-C-----HHHHHHHHHHHHHHCTTSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCC-C-----HHHHHHHHHHHHHhCCCCeEEE
Confidence 577888888888888999988854421 1 3334678888888777765543
No 333
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=29.48 E-value=2.2e+02 Score=25.08 Aligned_cols=132 Identities=14% Similarity=0.176 Sum_probs=71.1
Q ss_pred chhHHHHHHHHHHCCC--cEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 159 PDEPTNVAEAIASWGL--DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~--~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
++-+....+.+.+.++ ..++|-=.+.....+ ...+.+.++.+++. ++.| .+-||......+..|....+|.+
T Consensus 105 ~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~--~~~~~~~l~~l~~~--G~~i--alDdfG~g~ssl~~L~~l~~d~i 178 (259)
T 3s83_A 105 PGLVADVAETLRVNRLPRGALKLEVTESDIMRD--PERAAVILKTLRDA--GAGL--ALDDFGTGFSSLSYLTRLPFDTL 178 (259)
T ss_dssp TTHHHHHHHHHHHTTCCTTSEEEEEEHHHHHHC--HHHHHHHHHHHHHH--TCEE--EEECC---CHHHHHHHHSCCCEE
T ss_pred cHHHHHHHHHHHHcCCCcceEEEEECCchhhhC--HHHHHHHHHHHHHC--CCEE--EEECCCCCchhHHHHHhCCCCEE
Confidence 3334445555666665 355553333211112 34577788888875 3444 44566444567888888888877
Q ss_pred cccccchHHHHHhhcCCCCCHHHHHH-HHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecCC
Q 017179 237 AHNIETVEELQSAVRDHRANFKQSLD-VLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (376)
Q Consensus 237 ~h~lEtv~~l~~~vr~r~~t~e~~L~-vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY~ 313 (376)
-.. ..+...+. ........++ ++..++. .|+.+ ++---||.+++ +.|+++|++.+- |.|+
T Consensus 179 KiD----~~~v~~~~-~~~~~~~~~~~i~~~a~~---~g~~v----iaeGVEt~~~~----~~l~~lG~~~~Q-G~~~ 239 (259)
T 3s83_A 179 KID----RYFVRTMG-NNAGSAKIVRSVVKLGQD---LDLEV----VAEGVENAEMA----HALQSLGCDYGQ-GFGY 239 (259)
T ss_dssp EEC----HHHHHHTT-TCHHHHHHHHHHHHHHHH---TTCEE----EECCCCSHHHH----HHHHHHTCCEEC-BTTT
T ss_pred EEC----HHHHhhhh-cCchHHHHHHHHHHHHHH---CCCeE----EEEeCCCHHHH----HHHHhcCCCEee-cCcc
Confidence 652 24444443 1222333343 4455555 34533 22223898864 578899999763 4444
No 334
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=29.33 E-value=11 Score=33.88 Aligned_cols=73 Identities=19% Similarity=0.188 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
++.+.++.+.+.|+.+|.+|+.+++... .|. -.+++++|++.. ++.|-+ .+... +.+.+..+.++|+|.+..+
T Consensus 157 ~~~~~a~~~~~~G~~~i~~t~~~~~g~~-~g~--~~~~~~~i~~~~-~iPvia-~GGI~-~~~d~~~~~~~Gad~v~vg 229 (247)
T 3tdn_A 157 LLRDWVVEVEKRGAGEILLTSIDRDGTK-SGY--DTEMIRFVRPLT-TLPIIA-SGGAG-KMEHFLEAFLRGADKVSIN 229 (247)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred CHHHHHHHHHhcCCCEEEEecccCCCCc-CCC--CHHHHHHHHHhC-CCCEEE-ECCCC-CHHHHHHHHHcCCcHhhcc
Confidence 4555677788899999999987664322 121 235666776543 222211 11221 4677888888898877554
No 335
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=29.20 E-value=1.3e+02 Score=29.02 Aligned_cols=87 Identities=7% Similarity=0.076 Sum_probs=47.5
Q ss_pred HHHHHHHcCccccccccc---chHHHHHh-hcCC----CCCHHH----HHHHHHHHHHhCCCC-ceEEEeE---EEec--
Q 017179 224 CVREVAKSGLNVFAHNIE---TVEELQSA-VRDH----RANFKQ----SLDVLMMAKDYVPAG-TLTKTSI---MLGC-- 285 (376)
Q Consensus 224 ~l~~L~~aGld~i~h~lE---tv~~l~~~-vr~r----~~t~e~----~L~vl~~ak~~~p~G-i~tkt~i---mvGl-- 285 (376)
..+..+++|.|.+.++.- ..+..+.- .+.| +.+++. .+++++.+++..+.. +.++-+. .-|+
T Consensus 158 AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~ 237 (362)
T 4ab4_A 158 GAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGD 237 (362)
T ss_dssp HHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCC
T ss_pred HHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccCC
Confidence 345556777777655421 11222211 1211 233443 356777777765431 2233221 1122
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 286 GETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 286 GET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
+++.++..+.++.|.+.++|++++.
T Consensus 238 ~~~~~~~~~la~~l~~~Gvd~i~v~ 262 (362)
T 4ab4_A 238 ADRAETFTYVARELGKRGIAFICSR 262 (362)
T ss_dssp TTHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCcHHHHHHHHHHHHHhCCCEEEEC
Confidence 2346789999999999999999985
No 336
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=29.19 E-value=1.3e+02 Score=29.29 Aligned_cols=78 Identities=13% Similarity=0.063 Sum_probs=52.3
Q ss_pred CCchhHHHHHHHHHHCC------CcEEEEEeeeCCC---CCc----ccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChH
Q 017179 157 PDPDEPTNVAEAIASWG------LDYVVITSVDRDD---LAD----QGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNG 223 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G------~~eIvLTsg~r~d---l~d----~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e 223 (376)
.+.++..+.++.+.+.| +.+|.++++.... .+. .+. ...+.++.||+... +.|- ..+.+ +.+
T Consensus 257 ~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~vk~~~~-iPvi-~~G~i--~~~ 331 (402)
T 2hsa_B 257 NPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEE-EEARLMRTLRNAYQ-GTFI-CSGGY--TRE 331 (402)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHH-HHHHHHHHHHHHCS-SCEE-EESSC--CHH
T ss_pred CCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCc-chHHHHHHHHHHCC-CCEE-EeCCC--CHH
Confidence 45678889999999999 9999999875432 110 121 23567788888763 3332 34555 667
Q ss_pred HHHHHHHcC-ccccccc
Q 017179 224 CVREVAKSG-LNVFAHN 239 (376)
Q Consensus 224 ~l~~L~~aG-ld~i~h~ 239 (376)
..+.+.+.| +|.+..+
T Consensus 332 ~a~~~l~~g~aD~V~ig 348 (402)
T 2hsa_B 332 LGIEAVAQGDADLVSYG 348 (402)
T ss_dssp HHHHHHHTTSCSEEEES
T ss_pred HHHHHHHCCCCceeeec
Confidence 777777776 8888775
No 337
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=29.06 E-value=65 Score=30.28 Aligned_cols=135 Identities=14% Similarity=0.230 Sum_probs=77.9
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCCCC-Ccc------cHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHc
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRDDL-ADQ------GSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS 231 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~dl-~d~------g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a 231 (376)
.+|+++.|..++ -..|+|.=-.+..+ .++ ..+.+.++|+.+++. +++|.+++ |- +.+.++.-++.
T Consensus 104 t~emi~ial~~k---P~~vtLVPEkreE~TTegGlDv~~~~~~L~~~i~~L~~~--GIrVSLFI-Dp--d~~qI~aA~~~ 175 (278)
T 3gk0_A 104 TPEMLDIACEIR---PHDACLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADA--GVRVSLFI-DP--DEAQIRAAHET 175 (278)
T ss_dssp SHHHHHHHHHHC---CSEEEECCCSGGGBCSSSSBCTTTTHHHHHHHHHHHHHT--TCEEEEEE-CS--CHHHHHHHHHH
T ss_pred CHHHHHHHHHcC---CCEEEECCCCCCCcCCCcchhhhccHHHHHHHHHHHHHC--CCEEEEEe-CC--CHHHHHHHHHh
Confidence 467777776554 36777753322222 122 256788899999874 79998876 22 67899999999
Q ss_pred CcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHc-CCcEEEee
Q 017179 232 GLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAA-GVDVMTFG 310 (376)
Q Consensus 232 Gld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel-~vd~v~~~ 310 (376)
|+|++...-...-..+..-. +...++...+.-+.|++ .|+.|.+ |+|=+-+-+.. +..+ ++.-++||
T Consensus 176 GAd~IELhTG~YA~a~~~~~-~~~el~rl~~aA~~A~~---lGL~VnA----GHGL~y~Nv~~----ia~ip~i~ElnIG 243 (278)
T 3gk0_A 176 GAPVIELHTGRYADAHDAAE-QQREFERIATGVDAGIA---LGLKVNA----GHGLHYTNVQA----IAALPGIAELNIG 243 (278)
T ss_dssp TCSEEEECCHHHHTCSSHHH-HHHHHHHHHHHHHHHHH---TTCEEEE----CTTCCTTTHHH----HHTCTTEEEEEEC
T ss_pred CcCEEEEecchhhccCCchh-HHHHHHHHHHHHHHHHH---cCCEEec----CCCCCHHHHHH----HHhCCCCeEEecC
Confidence 99987553211001010000 01234455555566666 4676654 66666655542 2233 35678887
Q ss_pred cCC
Q 017179 311 QYM 313 (376)
Q Consensus 311 qY~ 313 (376)
.++
T Consensus 244 Hai 246 (278)
T 3gk0_A 244 HAI 246 (278)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 338
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=29.05 E-value=3.4e+02 Score=24.95 Aligned_cols=131 Identities=15% Similarity=0.203 Sum_probs=80.7
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCC-C------CC-ChHHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPD-F------RG-NNGCVREV 228 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd-~------~g-~~e~l~~L 228 (376)
+++.+..+..+.+... ++.+-+-+|...-++ .+.+-+.|+..++. ++.+ +++. + ++ -++.++..
T Consensus 23 lg~~~~~d~Le~~g~y-ID~lKfg~Gt~~l~~---~~~l~eki~l~~~~--gV~v--~~GGTl~E~~~~qg~~~~yl~~~ 94 (251)
T 1qwg_A 23 LPPKFVEDYLKVCGDY-IDFVKFGWGTSAVID---RDVVKEKINYYKDW--GIKV--YPGGTLFEYAYSKGKFDEFLNEC 94 (251)
T ss_dssp CCHHHHHHHHHHHGGG-CSEEEECTTGGGGSC---HHHHHHHHHHHHTT--TCEE--EECHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHhhhh-cceEEecCceeeecC---HHHHHHHHHHHHHc--CCeE--ECCcHHHHHHHHcCcHHHHHHHH
Confidence 5666665555443332 677777776543222 23345555555443 2333 3432 1 11 25667777
Q ss_pred HHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--C-----CCHHHHHHHHHHHHH
Q 017179 229 AKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--G-----ETPDQVVSTMEKVRA 301 (376)
Q Consensus 229 ~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl--G-----ET~ee~~e~L~~Lre 301 (376)
++.|.+.+..+ +-. -.-+.+++++.|+.+++ .|+.+.+-+ |- + .+.+++++.++.--+
T Consensus 95 k~lGf~~iEiS----~G~------i~l~~~~~~~~I~~~~~---~G~~v~~Ev--G~k~~~~~~~~~~~~~I~~~~~~Le 159 (251)
T 1qwg_A 95 EKLGFEAVEIS----DGS------SDISLEERNNAIKRAKD---NGFMVLTEV--GKKMPDKDKQLTIDDRIKLINFDLD 159 (251)
T ss_dssp HHHTCCEEEEC----CSS------SCCCHHHHHHHHHHHHH---TTCEEEEEE--CCSSHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEC----CCc------ccCCHHHHHHHHHHHHH---CCCEEeeec--cccCCcccCCCCHHHHHHHHHHHHH
Confidence 77776665442 210 13567899999999999 578876655 44 3 477899999998889
Q ss_pred cCCcEEEee
Q 017179 302 AGVDVMTFG 310 (376)
Q Consensus 302 l~vd~v~~~ 310 (376)
.|.+.|-+=
T Consensus 160 AGA~~ViiE 168 (251)
T 1qwg_A 160 AGADYVIIE 168 (251)
T ss_dssp HTCSEEEEC
T ss_pred CCCcEEEEe
Confidence 999998873
No 339
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=28.99 E-value=2.2e+02 Score=25.16 Aligned_cols=98 Identities=16% Similarity=0.225 Sum_probs=55.6
Q ss_pred CCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHHHhhcC
Q 017179 173 GLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRD 252 (376)
Q Consensus 173 G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~ 252 (376)
+...++++|-+ .+.++.+++..|.+.+..+.... ..+....+...|++.+..... .+.
T Consensus 139 ~~~~v~i~Sf~------------~~~l~~~~~~~p~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~~~-------~~~- 196 (247)
T 2otd_A 139 GMTPPLLSSFE------------IDALEAAQQAAPELPRGLLLDEW--RDDWRELTARLGCVSIHLNHK-------LLD- 196 (247)
T ss_dssp TSCCCEEEESC------------HHHHHHHHHHCTTSCEEEEESSC--CTTHHHHHHHHTCSEEEEEGG-------GCC-
T ss_pred CcCCEEEEcCC------------HHHHHHHHHHCCCCCEEEEecCC--cccHHHHHHHcCCeEEecChH-------hCC-
Confidence 44467777642 23566777777887777665433 123334455556665543221 111
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecC
Q 017179 253 HRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (376)
Q Consensus 253 r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY 312 (376)
-+.++.+++ .|+.+.+.-+ .+.+ .++.+.++|+|.|.- .|
T Consensus 197 --------~~~v~~~~~---~G~~v~~wTv----n~~~----~~~~l~~~GvdgI~T-D~ 236 (247)
T 2otd_A 197 --------KARVMQLKD---AGLRILVYTV----NKPQ----HAAELLRWGVDCICT-DA 236 (247)
T ss_dssp --------HHHHHHHHH---TTCEEEEECC----CCHH----HHHHHHHHTCSEEEE-SC
T ss_pred --------HHHHHHHHH---CCCEEEEEcc----CCHH----HHHHHHHcCCCEEEe-CC
Confidence 256777787 4776654432 3333 356677899998754 44
No 340
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=28.89 E-value=1.6e+02 Score=21.61 Aligned_cols=38 Identities=21% Similarity=0.295 Sum_probs=22.8
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 197 QTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 197 elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
++++.|++..|.+.|-+++..- +.+......++|++.|
T Consensus 64 ~~~~~l~~~~~~~~ii~~s~~~--~~~~~~~~~~~g~~~~ 101 (120)
T 1tmy_A 64 DAIKEIMKIDPNAKIIVCSAMG--QQAMVIEAIKAGAKDF 101 (120)
T ss_dssp HHHHHHHHHCTTCCEEEEECTT--CHHHHHHHHHTTCCEE
T ss_pred HHHHHHHhhCCCCeEEEEeCCC--CHHHHHHHHHhCccee
Confidence 5667777666666665555433 4455556667776544
No 341
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=28.88 E-value=88 Score=30.25 Aligned_cols=67 Identities=16% Similarity=0.218 Sum_probs=44.5
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcC-ccccc
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG-LNVFA 237 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG-ld~i~ 237 (376)
.++....++++.+.|+.+|.++++... . +.++.||+..+. .| +..+.+ +.+..+.+.+.| +|.+.
T Consensus 241 ~~~~~~la~~l~~~Gvd~i~v~~~~~~------~----~~~~~ik~~~~i-Pv-i~~Ggi--t~e~a~~~l~~g~aD~V~ 306 (362)
T 4ab4_A 241 AETFTYVARELGKRGIAFICSREREAD------D----SIGPLIKEAFGG-PY-IVNERF--DKASANAALASGKADAVA 306 (362)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCCT------T----CCHHHHHHHHCS-CE-EEESSC--CHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEECCCCCC------H----HHHHHHHHHCCC-CE-EEeCCC--CHHHHHHHHHcCCccEEE
Confidence 456788899999999999999987511 1 234555554432 22 133455 677777777776 88877
Q ss_pred cc
Q 017179 238 HN 239 (376)
Q Consensus 238 h~ 239 (376)
.+
T Consensus 307 iG 308 (362)
T 4ab4_A 307 FG 308 (362)
T ss_dssp ES
T ss_pred EC
Confidence 65
No 342
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=28.75 E-value=2.3e+02 Score=26.58 Aligned_cols=86 Identities=12% Similarity=0.046 Sum_probs=53.3
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCccc--HHHHHHHHHHHHhh-CCCcEEEEecCCCCCChHHHHHHHHcCc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQG--SGHFAQTVRKLKEL-KPNMLIEALVPDFRGNNGCVREVAKSGL 233 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g--~~~~~elvr~Ik~~-~p~i~Ie~l~pd~~g~~e~l~~L~~aGl 233 (376)
++.+|+.+.++...+.|.++|--+.|-.. +| .+. .++++++.+. .+.+.|.+.-+-. +.+....+.++|+
T Consensus 185 Lt~eei~~A~~ia~eaGADfVKTSTGf~~----~GAT~ed-v~lmr~~v~~~g~~v~VKAAGGIr--t~edAl~mi~aGA 257 (288)
T 3oa3_A 185 LTADEIIAGCVLSSLAGADYVKTSTGFNG----PGASIEN-VSLMSAVCDSLQSETRVKASGGIR--TIEDCVKMVRAGA 257 (288)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEECCCSSSS----CCCCHHH-HHHHHHHHHHSSSCCEEEEESSCC--SHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEcCCCCCC----CCCCHHH-HHHHHHHHHHhCCCceEEEeCCCC--CHHHHHHHHHcCC
Confidence 78889988888889999999976544211 12 222 3445554432 2457777655433 5677788889999
Q ss_pred ccccccccchHHHHHhhc
Q 017179 234 NVFAHNIETVEELQSAVR 251 (376)
Q Consensus 234 d~i~h~lEtv~~l~~~vr 251 (376)
+++.-. ....+++..+
T Consensus 258 ~RiGtS--~g~~I~~~~~ 273 (288)
T 3oa3_A 258 ERLGAS--AGVKIVNETR 273 (288)
T ss_dssp SEEEES--CHHHHHHHHT
T ss_pred ceeehh--hHHHHHHHHH
Confidence 977542 2235555443
No 343
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=28.73 E-value=1.1e+02 Score=30.07 Aligned_cols=88 Identities=8% Similarity=0.126 Sum_probs=51.6
Q ss_pred HHHHHHHHcCccccccccc---chHHHH-HhhcCC----CCCHHH----HHHHHHHHHHhCCCC-ceEEEeEE---Eec-
Q 017179 223 GCVREVAKSGLNVFAHNIE---TVEELQ-SAVRDH----RANFKQ----SLDVLMMAKDYVPAG-TLTKTSIM---LGC- 285 (376)
Q Consensus 223 e~l~~L~~aGld~i~h~lE---tv~~l~-~~vr~r----~~t~e~----~L~vl~~ak~~~p~G-i~tkt~im---vGl- 285 (376)
+..+..+++|.|.+.++.- ..+..+ +..+.| +.+.+. .+++++.+++..+.. +.++.+.- -|+
T Consensus 175 ~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~ 254 (402)
T 2hsa_B 175 RSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAM 254 (402)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCC
T ss_pred HHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCC
Confidence 3455667889888766531 122222 111111 234443 467778888765421 23333321 112
Q ss_pred -CCCHHHHHHHHHHHHHcC------CcEEEee
Q 017179 286 -GETPDQVVSTMEKVRAAG------VDVMTFG 310 (376)
Q Consensus 286 -GET~ee~~e~L~~Lrel~------vd~v~~~ 310 (376)
|++.++..+.++.|.+.+ +|++++.
T Consensus 255 ~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~ 286 (402)
T 2hsa_B 255 DSNPLSLGLAVVERLNKIQLHSGSKLAYLHVT 286 (402)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCccCCceEEEEEe
Confidence 456788999999999999 9999996
No 344
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=28.73 E-value=2.8e+02 Score=25.60 Aligned_cols=82 Identities=13% Similarity=0.198 Sum_probs=51.1
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEE--eee-----CCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVIT--SVD-----RDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVA 229 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLT--sg~-----r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~ 229 (376)
-+++|+.+.++.+.+.|...|-+. |+. ....+....+.+.++++..++..-.+.+++. ..+.++.+.
T Consensus 164 ~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~------~~~~i~~~~ 237 (403)
T 3gnh_A 164 DSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAH------GASGIREAV 237 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEEC------SHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEeC------CHHHHHHHH
Confidence 467888899999989998766554 331 1111111246677777777765322344431 345678888
Q ss_pred HcCcccccccccchH
Q 017179 230 KSGLNVFAHNIETVE 244 (376)
Q Consensus 230 ~aGld~i~h~lEtv~ 244 (376)
++|.+.+.|..-..+
T Consensus 238 ~~g~~~i~H~~~~~~ 252 (403)
T 3gnh_A 238 RAGVDTIEHASLVDD 252 (403)
T ss_dssp HTTCSEEEECTTCCH
T ss_pred HhCCCEEecCCcCCH
Confidence 999999999754333
No 345
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=28.71 E-value=1.7e+02 Score=22.41 Aligned_cols=39 Identities=8% Similarity=0.187 Sum_probs=26.9
Q ss_pred HHHHHHHHh--hCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 196 AQTVRKLKE--LKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 196 ~elvr~Ik~--~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++.|++ ..|.+.|-++++.. +.+.+....++|++.|
T Consensus 67 ~~~~~~lr~~~~~~~~pii~~s~~~--~~~~~~~~~~~ga~~~ 107 (144)
T 3kht_A 67 FEVMSAVRKPGANQHTPIVILTDNV--SDDRAKQCMAAGASSV 107 (144)
T ss_dssp HHHHHHHHSSSTTTTCCEEEEETTC--CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhcccccCCCEEEEeCCC--CHHHHHHHHHcCCCEE
Confidence 467777877 45677776677654 5667777778887654
No 346
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=28.63 E-value=97 Score=29.67 Aligned_cols=80 Identities=11% Similarity=0.044 Sum_probs=50.9
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCC-cccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcC-c
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLA-DQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG-L 233 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~-d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG-l 233 (376)
..+.++..+.++.+.+. +++|.++.|...+-+ ..+..+..+.++.|++... +.|- ..+.+. +.+..+.+.+.| +
T Consensus 226 g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi-~~Ggi~-t~e~Ae~~l~~G~a 301 (343)
T 3kru_A 226 GINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCN-IKTS-AVGLIT-TQELAEEILSNERA 301 (343)
T ss_dssp SCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT-CEEE-EESSCC-CHHHHHHHHHTTSC
T ss_pred CccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcC-cccc-eeeeee-HHHHHHHHHhchhh
Confidence 36788999999999999 999999765321110 0011124566677776543 3332 334432 577788888887 8
Q ss_pred cccccc
Q 017179 234 NVFAHN 239 (376)
Q Consensus 234 d~i~h~ 239 (376)
|.+..+
T Consensus 302 D~V~iG 307 (343)
T 3kru_A 302 DLVALG 307 (343)
T ss_dssp SEEEES
T ss_pred HHHHHH
Confidence 888775
No 347
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=28.59 E-value=1.4e+02 Score=27.52 Aligned_cols=64 Identities=11% Similarity=0.024 Sum_probs=37.9
Q ss_pred HHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCC-CcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 169 IASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 169 l~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
+.+.|+++|-+|+.+...+. .+. +.++.|.+..| ++.+-+..+-. +.+.+..+.++|++.+-.+
T Consensus 178 A~~~Gad~IGv~~r~l~~~~-~dl----~~~~~l~~~v~~~~pvVaegGI~--t~edv~~l~~~GadgvlVG 242 (272)
T 3qja_A 178 ALKAGAKVIGVNARDLMTLD-VDR----DCFARIAPGLPSSVIRIAESGVR--GTADLLAYAGAGADAVLVG 242 (272)
T ss_dssp HHHHTCSEEEEESBCTTTCC-BCT----THHHHHGGGSCTTSEEEEESCCC--SHHHHHHHHHTTCSEEEEC
T ss_pred HHHCCCCEEEECCCcccccc-cCH----HHHHHHHHhCcccCEEEEECCCC--CHHHHHHHHHcCCCEEEEc
Confidence 34569999988865432221 122 23445555444 44443333322 5888999999999887664
No 348
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=28.58 E-value=2.6e+02 Score=26.40 Aligned_cols=88 Identities=13% Similarity=0.181 Sum_probs=52.9
Q ss_pred HHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCC
Q 017179 195 FAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAG 274 (376)
Q Consensus 195 ~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~G 274 (376)
+.+.|+++++..|...|++..- +.+.+.+..++|+|++-. | .-+.++.-++++.++. .
T Consensus 194 i~~Av~~ar~~~p~~kIeVEv~----tl~e~~eAl~aGaDiImL--D------------n~s~~~l~~av~~~~~---~- 251 (300)
T 3l0g_A 194 ITLAIQRLRKNLKNEYIAIECD----NISQVEESLSNNVDMILL--D------------NMSISEIKKAVDIVNG---K- 251 (300)
T ss_dssp HHHHHHHHHHHSSSCCEEEEES----SHHHHHHHHHTTCSEEEE--E------------SCCHHHHHHHHHHHTT---S-
T ss_pred HHHHHHHHHHhCCCCCEEEEEC----CHHHHHHHHHcCCCEEEE--C------------CCCHHHHHHHHHhhcC---c-
Confidence 4567788888778777777664 346777788899998732 2 2233444444444332 2
Q ss_pred ceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecC
Q 017179 275 TLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (376)
Q Consensus 275 i~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY 312 (376)
+.+-.+. |-|. +.+..+.+.|+|++.+|-.
T Consensus 252 v~leaSG----GIt~----~~i~~~A~tGVD~IsvGal 281 (300)
T 3l0g_A 252 SVLEVSG----CVNI----RNVRNIALTGVDYISIGCI 281 (300)
T ss_dssp SEEEEES----SCCT----TTHHHHHTTTCSEEECGGG
T ss_pred eEEEEEC----CCCH----HHHHHHHHcCCCEEEeCcc
Confidence 3222211 2243 3345567899999999854
No 349
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=28.50 E-value=2.1e+02 Score=25.01 Aligned_cols=133 Identities=8% Similarity=0.020 Sum_probs=71.5
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCC-CChHHHHHHHHcCccccc
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFR-GNNGCVREVAKSGLNVFA 237 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~-g~~e~l~~L~~aGld~i~ 237 (376)
.+++.+.++.+..+|++.|++-.+. +.+.++.+..++..-.+.+|-....+. .+.+.+..+.+.+.+.+.
T Consensus 90 ~~~~~~~i~~A~~lGa~~v~~~~~~---------~~~~~l~~~a~~~gv~l~~En~~~~~~~~~~~~~~~ll~~~~~~~g 160 (262)
T 3p6l_A 90 SSDWEKMFKFAKAMDLEFITCEPAL---------SDWDLVEKLSKQYNIKISVHNHPQPSDYWKPENLLKAISGRSQSLG 160 (262)
T ss_dssp TTHHHHHHHHHHHTTCSEEEECCCG---------GGHHHHHHHHHHHTCEEEEECCSSSSSSSSHHHHHHHHTTSCTTEE
T ss_pred HHHHHHHHHHHHHcCCCEEEecCCH---------HHHHHHHHHHHHhCCEEEEEeCCCccccCCHHHHHHHHHhCCCceE
Confidence 5678888888999999999986431 223344444444321233333322221 245566666654545566
Q ss_pred ccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeE----------EEecCCCHHHHHHHHHHHHHcCCc-E
Q 017179 238 HNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSI----------MLGCGETPDQVVSTMEKVRAAGVD-V 306 (376)
Q Consensus 238 h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~i----------mvGlGET~ee~~e~L~~Lrel~vd-~ 306 (376)
..+++..-.. .+.+..++++.+ ...... +.++-.. -+-+|+-.-++...++.|++.+.+ .
T Consensus 161 ~~~D~~h~~~-----~g~d~~~~l~~~---~~~i~~-vH~~D~~~~~~~~~~~~~~~~G~G~id~~~~~~~l~~~gy~g~ 231 (262)
T 3p6l_A 161 SCSDVGHWRR-----EGLNQIDCLKQL---KGRIIS-LHFKDIAPKKAGENEQHDVIWGTGILDVKGMLKELKSQNFKGV 231 (262)
T ss_dssp EEEEHHHHHH-----TTCCHHHHHHHT---TTCEEE-EEECEECCCCTTCSCCCEECTTSSSSCHHHHHHHHHHTTCCEE
T ss_pred EEechHHHHh-----cCCCHHHHHHHH---hhhheE-EeeccCCccccCcCccccCCCCCCccCHHHHHHHHHHCCCCeE
Confidence 6666655321 134554444333 221111 3333222 123366666788888999999998 4
Q ss_pred EEe
Q 017179 307 MTF 309 (376)
Q Consensus 307 v~~ 309 (376)
+.+
T Consensus 232 ~~~ 234 (262)
T 3p6l_A 232 FSI 234 (262)
T ss_dssp EEE
T ss_pred EEE
Confidence 555
No 350
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=28.26 E-value=3.4e+02 Score=24.63 Aligned_cols=49 Identities=12% Similarity=0.184 Sum_probs=33.5
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcc--cHHHHHHHHHHHHhhCCCc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQ--GSGHFAQTVRKLKELKPNM 209 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~--g~~~~~elvr~Ik~~~p~i 209 (376)
.+.+|+++.++.+...|++-|-+ |-|+.+. ..+.+.+.+..+++..+++
T Consensus 29 ~t~~e~l~~a~~~~~~~aD~vEl----R~D~l~~~~~~~~v~~~l~~lr~~~~~l 79 (258)
T 4h3d_A 29 KNKKDIIKEAKELKDACLDIIEW----RVDFFENVENIKEVKEVLYELRSYIHDI 79 (258)
T ss_dssp SSHHHHHHHHHHHTTSSCSEEEE----EGGGCTTTTCHHHHHHHHHHHHHHCTTS
T ss_pred CCHHHHHHHHHHHhhcCCCEEEE----eeccccccCCHHHHHHHHHHHHHhcCCC
Confidence 46899999999998888876544 3333211 2567888888888765433
No 351
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=28.22 E-value=1.3e+02 Score=22.73 Aligned_cols=39 Identities=18% Similarity=0.189 Sum_probs=24.5
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++.|++..|.+.|-+++..- +.+......++|++.|
T Consensus 62 ~~~~~~l~~~~~~~~ii~~s~~~--~~~~~~~~~~~g~~~~ 100 (134)
T 3f6c_A 62 IQVLETLRKRQYSGIIIIVSAKN--DHFYGKHCADAGANGF 100 (134)
T ss_dssp HHHHHHHHHTTCCSEEEEEECC-----CTHHHHHHTTCSEE
T ss_pred HHHHHHHHhcCCCCeEEEEeCCC--ChHHHHHHHHhCCCEE
Confidence 46777888777777776666543 3445566667786654
No 352
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=28.08 E-value=3.7e+02 Score=25.00 Aligned_cols=123 Identities=12% Similarity=0.165 Sum_probs=0.0
Q ss_pred HHHHHHCCCcEEEEEeee-------CCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCC--CCCChHHH----HHHHHcC
Q 017179 166 AEAIASWGLDYVVITSVD-------RDDLADQGSGHFAQTVRKLKELKPNMLIEALVPD--FRGNNGCV----REVAKSG 232 (376)
Q Consensus 166 a~al~~~G~~eIvLTsg~-------r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd--~~g~~e~l----~~L~~aG 232 (376)
|+.+.+.|++-| ++|-. .+|...-..+.++.-++.|.+-.+...|-+=.|. | ++++.+ .++.++|
T Consensus 42 A~l~e~aG~d~i-lvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY-~s~~~a~~~a~rl~kaG 119 (275)
T 3vav_A 42 AALLDRANVDVQ-LIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTY-GTPADAFASAVKLMRAG 119 (275)
T ss_dssp HHHHHHTTCSEE-EECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSC-SSHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCEE-EECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCC-CCHHHHHHHHHHHHHcC
Q ss_pred cccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeE--------------EEec-CCCHHHHHHHHH
Q 017179 233 LNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSI--------------MLGC-GETPDQVVSTME 297 (376)
Q Consensus 233 ld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~i--------------mvGl-GET~ee~~e~L~ 297 (376)
++.+.. -+. ....+.++.+.+ .|+++..|+ +.|- -+..+++++-.+
T Consensus 120 a~aVkl--------------Edg--~~~~~~i~~l~~---~GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~rA~ 180 (275)
T 3vav_A 120 AQMVKF--------------EGG--EWLAETVRFLVE---RAVPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRDAR 180 (275)
T ss_dssp CSEEEE--------------ECC--GGGHHHHHHHHH---TTCCEEEEEESCGGGHHHHC---CCCCSHHHHHHHHHHHH
T ss_pred CCEEEE--------------CCc--hhHHHHHHHHHH---CCCCEEEecCCCceEEeccCCeEEEcCCHHHHHHHHHHHH
Q ss_pred HHHHcCCcEEEe
Q 017179 298 KVRAAGVDVMTF 309 (376)
Q Consensus 298 ~Lrel~vd~v~~ 309 (376)
.+.+.|.+.+-+
T Consensus 181 a~~eAGA~~ivl 192 (275)
T 3vav_A 181 AVEEAGAQLIVL 192 (275)
T ss_dssp HHHHHTCSEEEE
T ss_pred HHHHcCCCEEEe
No 353
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=27.97 E-value=3.1e+02 Score=24.14 Aligned_cols=140 Identities=9% Similarity=0.030 Sum_probs=71.4
Q ss_pred chhHHHHHHHHHHCCCcEEEEEe------eeC-C------CC-CcccHHHHHHHHHHHHhhC--CCcEE--EEecCCCCC
Q 017179 159 PDEPTNVAEAIASWGLDYVVITS------VDR-D------DL-ADQGSGHFAQTVRKLKELK--PNMLI--EALVPDFRG 220 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTs------g~r-~------dl-~d~g~~~~~elvr~Ik~~~--p~i~I--e~l~pd~~g 220 (376)
.+.+.+.++.+.++|++.|++.+ |.. . .. .+...+.+++.++.+.+.. -++.+ |-....+..
T Consensus 89 ~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~ 168 (301)
T 3cny_A 89 SEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHHHMGTGIQ 168 (301)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSSSC
T ss_pred HHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEecCCCcccC
Confidence 45667778888899999999875 322 1 11 1112344555555544321 24444 322223444
Q ss_pred ChHHHHHHHH-cCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEE--------------------
Q 017179 221 NNGCVREVAK-SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKT-------------------- 279 (376)
Q Consensus 221 ~~e~l~~L~~-aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt-------------------- 279 (376)
+.+.+..|.+ .+.+.+...+++..-... +.+..+++ +.+...... +.++-
T Consensus 169 ~~~~~~~l~~~~~~~~vg~~~D~~h~~~~-----g~d~~~~l---~~~~~~i~~-vHl~D~~~~~~~~~~~~~~~~~~~~ 239 (301)
T 3cny_A 169 TKEETDRLMANTDPKLVGLLYDTGHIAVS-----DGDYMALL---NAHIDRVVH-VHFKDVRRSKEEECRAKGLTFQGSF 239 (301)
T ss_dssp SHHHHHHHHHTSCTTTCEEEEEHHHHHHH-----HSCSHHHH---HHHGGGEEE-EEECEECHHHHHHHHHHTCCHHHHH
T ss_pred CHHHHHHHHHhCCccceeEEechHHHHHc-----CCCHHHHH---HHHHhheeE-EEeecCCcchhhhhhhcccchhhHh
Confidence 5555555554 444446666666553221 12333333 333332211 23321
Q ss_pred ----eEEEecCCCHHHHHHHHHHHHHcCCc-EEEe
Q 017179 280 ----SIMLGCGETPDQVVSTMEKVRAAGVD-VMTF 309 (376)
Q Consensus 280 ----~imvGlGET~ee~~e~L~~Lrel~vd-~v~~ 309 (376)
+..+|-| .-++.+.++.|++.+.+ .+.+
T Consensus 240 ~~~~~~~~G~G--~id~~~i~~~L~~~gy~g~~~~ 272 (301)
T 3cny_A 240 LNGMFTVPGDG--DLDFKPVYDKLIANNYKGWIVV 272 (301)
T ss_dssp HTTCEECTTTS--SCCCHHHHHHHHHTTCCEEEEE
T ss_pred hcCccccCCCC--CccHHHHHHHHHhcCCCeEEEE
Confidence 1334444 45677888888999987 4444
No 354
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=27.89 E-value=1.6e+02 Score=28.41 Aligned_cols=153 Identities=13% Similarity=0.056 Sum_probs=80.9
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCC---C-CC-----------c--ccHHHHHHHHHHHHhhC-CCcEEEEecCCC
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRD---D-LA-----------D--QGSGHFAQTVRKLKELK-PNMLIEALVPDF 218 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~---d-l~-----------d--~g~~~~~elvr~Ik~~~-p~i~Ie~l~pd~ 218 (376)
.+++++.+.++...+.|++.+-|--|..+ | .+ + ...+.-.+.|++|++.. |++.+.+ |.
T Consensus 132 ~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d~~l~v---Da 208 (401)
T 3sbf_A 132 DTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQFHILH---DV 208 (401)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEE---EC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCCCCEEEE---EC
Confidence 35889999999999999999988654321 0 00 0 01345678889998876 5665543 22
Q ss_pred CC--ChH----HHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHH
Q 017179 219 RG--NNG----CVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQV 292 (376)
Q Consensus 219 ~g--~~e----~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~ 292 (376)
++ +.+ .++.|.+.|++.+ |- - +. ..+ ++.++.+++.. +++ |+ .||+....
T Consensus 209 n~~~~~~~A~~~~~~L~~~~i~~i----Eq---P---~~--~~~----~~~~~~l~~~~--~iP----Ia--~dE~~~~~ 264 (401)
T 3sbf_A 209 HERLFPNQAIQFAKEVEQYKPYFI----ED---I---LP--PNQ----TEWLDNIRSQS--SVS----LG--LGELFNNP 264 (401)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSCE----EC---S---SC--TTC----GGGHHHHHTTC--CCC----EE--ECTTCCSH
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEE----EC---C---CC--hhH----HHHHHHHHhhC--CCC----EE--eCCccCCH
Confidence 11 322 2344444444333 21 0 11 122 23344455421 122 22 35555555
Q ss_pred HHHHHHHHHcCCcEEEeecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhc
Q 017179 293 VSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVA 347 (376)
Q Consensus 293 ~e~L~~Lrel~vd~v~~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~ 347 (376)
.+..+.++.-.+|++.+- +.+ +-. ..+...+..+|...|...+.
T Consensus 265 ~~~~~~i~~~~~d~v~~k----~~~----~GG---it~~~kia~~A~~~gi~~~~ 308 (401)
T 3sbf_A 265 EEWKSLIANRRIDFIRCH----VSQ----IGG---ITPALKLGHLCQNFGVRIAW 308 (401)
T ss_dssp HHHHHHHHTTCCSEECCC----GGG----GTS---HHHHHHHHHHHHHHTCEECC
T ss_pred HHHHHHHhcCCCCEEecC----ccc----cCC---HHHHHHHHHHHHHcCCEEEe
Confidence 555555666667777552 211 111 33566677777777776543
No 355
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=27.72 E-value=2.9e+02 Score=26.66 Aligned_cols=57 Identities=14% Similarity=0.075 Sum_probs=37.4
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEe-------------eeC----CCC--CcccHHHHHHHHHHHHhhC-CCcEEEE
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITS-------------VDR----DDL--ADQGSGHFAQTVRKLKELK-PNMLIEA 213 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTs-------------g~r----~dl--~d~g~~~~~elvr~Ik~~~-p~i~Ie~ 213 (376)
.+++++.+.++.+.+.|++.+-|-- |.. ++. .....+.-.+.|++|++.. |++.|.+
T Consensus 142 ~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~v 218 (409)
T 3go2_A 142 TDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILL 218 (409)
T ss_dssp CSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 5789999999999999999998753 110 111 0011344577888998876 6665543
No 356
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=27.63 E-value=3.8e+02 Score=25.41 Aligned_cols=85 Identities=12% Similarity=0.038 Sum_probs=61.8
Q ss_pred ChHHHHHHHHcCcccccccc-cchHHHHHhhcC--CCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHH
Q 017179 221 NNGCVREVAKSGLNVFAHNI-ETVEELQSAVRD--HRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTME 297 (376)
Q Consensus 221 ~~e~l~~L~~aGld~i~h~l-Etv~~l~~~vr~--r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~ 297 (376)
|.-....+.++|.|.+-.+= ......+ -.| ...++++.+..++.+.+..+. +++-.++=.|+| +.+++.++..
T Consensus 48 D~~sA~i~e~aGfdai~vs~~~~a~~~l--G~pD~~~vt~~em~~~~~~I~r~~~~-~PviaD~d~Gyg-~~~~v~~tv~ 123 (318)
T 1zlp_A 48 DALSAAVVEKTGFHAAFVSGYSVSAAML--GLPDFGLLTTTEVVEATRRITAAAPN-LCVVVDGDTGGG-GPLNVQRFIR 123 (318)
T ss_dssp SHHHHHHHHHTTCSEEEECHHHHHHHHH--CCCSSSCSCHHHHHHHHHHHHHHSSS-SEEEEECTTCSS-SHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECcHHHhhHhc--CCCCCCCCCHHHHHHHHHHHHhhccC-CCEEEeCCCCCC-CHHHHHHHHH
Confidence 33445666678887764431 0110111 111 247899999999999987655 889999999999 9999999999
Q ss_pred HHHHcCCcEEEe
Q 017179 298 KVRAAGVDVMTF 309 (376)
Q Consensus 298 ~Lrel~vd~v~~ 309 (376)
.+.+.|+.-|+|
T Consensus 124 ~l~~aGaagv~i 135 (318)
T 1zlp_A 124 ELISAGAKGVFL 135 (318)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHHHcCCcEEEE
Confidence 999999999998
No 357
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=27.37 E-value=71 Score=32.61 Aligned_cols=62 Identities=15% Similarity=0.328 Sum_probs=45.6
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEeecCC-CCCCCCCCCc-------ccCChHHHHHHHHHHHHHhhhhhc
Q 017179 286 GETPDQVVSTMEKVRAAGVDVMTFGQYM-RPSKRHMPVS-------EYITPEAFERYRALGMEMGFRYVA 347 (376)
Q Consensus 286 GET~ee~~e~L~~Lrel~vd~v~~~qY~-~P~~~~~~v~-------~~v~pe~~~~l~~~a~~~gf~~~~ 347 (376)
|-+...+.+.|..|+++|++.|-|.+.+ .|...+..+. ++=+++.|+.|-+.+.+.|.+.+.
T Consensus 168 ~Gd~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~Vil 237 (583)
T 1ea9_C 168 GGDLQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLL 237 (583)
T ss_dssp CCCHHHHHHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEE
T ss_pred CcCHHHHHHhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 5688999999999999999988776544 2322233333 234678999999999999987753
No 358
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=27.34 E-value=1.1e+02 Score=29.34 Aligned_cols=87 Identities=9% Similarity=0.164 Sum_probs=49.7
Q ss_pred HHHHHHHcCcccccccccc---hHHHH-HhhcCC----CCCHH----HHHHHHHHHHHhCCCC-ceEEEeE---EEec--
Q 017179 224 CVREVAKSGLNVFAHNIET---VEELQ-SAVRDH----RANFK----QSLDVLMMAKDYVPAG-TLTKTSI---MLGC-- 285 (376)
Q Consensus 224 ~l~~L~~aGld~i~h~lEt---v~~l~-~~vr~r----~~t~e----~~L~vl~~ak~~~p~G-i~tkt~i---mvGl-- 285 (376)
..+..+++|.|.+..|.-. ....+ +..+.| +.+.+ -.+++++.+++..+.. +.++.+. .-|.
T Consensus 166 aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~ 245 (364)
T 1vyr_A 166 AVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDN 245 (364)
T ss_dssp HHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCC
T ss_pred HHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccccccC
Confidence 4455677888887665311 12221 111211 12333 3467788888876431 2222222 1121
Q ss_pred -CCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 286 -GETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 286 -GET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
+.+.++..+.++.|.+.++|++++.
T Consensus 246 ~~~~~~~~~~~a~~l~~~G~d~i~v~ 271 (364)
T 1vyr_A 246 GPNEEADALYLIEELAKRGIAYLHMS 271 (364)
T ss_dssp CTTHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 4477889999999999999999996
No 359
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=27.18 E-value=1.3e+02 Score=29.13 Aligned_cols=86 Identities=7% Similarity=0.042 Sum_probs=0.0
Q ss_pred HHHHHHHHcCcccccccccchHHHHHhhcCC--------CCCHHHH----HHHHHHHHHhCCCCceEEEeEEEe------
Q 017179 223 GCVREVAKSGLNVFAHNIETVEELQSAVRDH--------RANFKQS----LDVLMMAKDYVPAGTLTKTSIMLG------ 284 (376)
Q Consensus 223 e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r--------~~t~e~~----L~vl~~ak~~~p~Gi~tkt~imvG------ 284 (376)
+..+..+++|.|.+.++.-.--=+-.+++|. +.+.+.+ +++++.+++..+.. .+..-|=.+
T Consensus 171 ~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~V~vrls~~~~~~g~ 249 (376)
T 1icp_A 171 VAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSD-RVGIRISPFAHYNEA 249 (376)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTCCTTTC
T ss_pred HHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCC-ceEEEeccccccCCC
Q ss_pred -cCCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 285 -CGETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 285 -lGET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
-+++.++..+.++.|.+.++|++++
T Consensus 250 ~~~~~~~~~~~la~~le~~Gvd~i~v 275 (376)
T 1icp_A 250 GDTNPTALGLYMVESLNKYDLAYCHV 275 (376)
T ss_dssp CCSCHHHHHHHHHHHHGGGCCSEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEE
No 360
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=27.06 E-value=4.2e+02 Score=25.35 Aligned_cols=131 Identities=17% Similarity=0.222 Sum_probs=73.1
Q ss_pred hHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccc
Q 017179 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNI 240 (376)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~l 240 (376)
+..+.++.+.+.|++.|.|-.... + ...+.++|+.|++..|++.|-+ +... +.+.++.+.++|+|.+..+.
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~g----~--~~~~~e~i~~ir~~~~~~pviv--~~v~-~~~~a~~a~~~Gad~I~vg~ 223 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAHG----H--STRIIELIKKIKTKYPNLDLIA--GNIV-TKEAALDLISVGADCLKVGI 223 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCC----S--SHHHHHHHHHHHHHCTTCEEEE--EEEC-SHHHHHHHHTTTCSEEEECS
T ss_pred hHHHHHHHHHHCCCCEEEEeCCCC----C--hHHHHHHHHHHHHHCCCCeEEE--cCCC-cHHHHHHHHhcCCCEEEECC
Confidence 345667778889999988722211 1 2457789999998876655432 2111 56788999999999885543
Q ss_pred cc--hHHHHHhhcCCCCCHHHHHHHHHHHHHhCCC-CceEEEeEEE-ecCCCHHHHHHHHHHHHHcCCcEEEeecC
Q 017179 241 ET--VEELQSAVRDHRANFKQSLDVLMMAKDYVPA-GTLTKTSIML-GCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (376)
Q Consensus 241 Et--v~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~-Gi~tkt~imv-GlGET~ee~~e~L~~Lrel~vd~v~~~qY 312 (376)
+. .... ......+..- +..+..+++..+. +++ +|. |=--|.+|+.+.+. +|.|.|-++..
T Consensus 224 ~~G~~~~~-~~~~~~g~p~---~~~l~~v~~~~~~~~ip----Via~GGI~~~~d~~~ala----~GAd~V~iG~~ 287 (404)
T 1eep_A 224 GPGSICTT-RIVAGVGVPQ---ITAICDVYEACNNTNIC----IIADGGIRFSGDVVKAIA----AGADSVMIGNL 287 (404)
T ss_dssp SCSTTSHH-HHHHCCCCCH---HHHHHHHHHHHTTSSCE----EEEESCCCSHHHHHHHHH----HTCSEEEECHH
T ss_pred CCCcCcCc-cccCCCCcch---HHHHHHHHHHHhhcCce----EEEECCCCCHHHHHHHHH----cCCCHHhhCHH
Confidence 21 1111 1111111111 2334444432211 233 222 22257888888775 48888888644
No 361
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=27.03 E-value=4.5e+02 Score=25.62 Aligned_cols=62 Identities=13% Similarity=0.156 Sum_probs=40.9
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-C---------C----CHHHH----HHHHHHHHHcCCcEEEeecCCC
Q 017179 253 HRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-G---------E----TPDQV----VSTMEKVRAAGVDVMTFGQYMR 314 (376)
Q Consensus 253 r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-G---------E----T~ee~----~e~L~~Lrel~vd~v~~~qY~~ 314 (376)
++.+.+++.+.++.+.+..|+.+. ...+... | + ++++. ....+.|.+.|...+.+..|.+
T Consensus 215 Pget~e~~~~tl~~~~~l~~~~i~--~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~Gy~~yeis~fa~ 292 (457)
T 1olt_A 215 PKQTPESFAFTLKRVAELNPDRLS--VFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQFIGMDHFAR 292 (457)
T ss_dssp TTCCHHHHHHHHHHHHHHCCSEEE--EEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTTCEEEETTEEEC
T ss_pred CCCCHHHHHHHHHHHHhcCcCEEE--eecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHHCCCeEEEechhcC
Confidence 478999999999999998776433 2222211 1 1 33443 3455677788888888877777
Q ss_pred CC
Q 017179 315 PS 316 (376)
Q Consensus 315 P~ 316 (376)
|+
T Consensus 293 ~~ 294 (457)
T 1olt_A 293 PD 294 (457)
T ss_dssp TT
T ss_pred CC
Confidence 74
No 362
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=27.01 E-value=4.1e+02 Score=25.19 Aligned_cols=73 Identities=10% Similarity=0.084 Sum_probs=43.7
Q ss_pred HHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHHH
Q 017179 223 GCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVRA 301 (376)
Q Consensus 223 e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlG-ET~ee~~e~L~~Lre 301 (376)
..++.+.++|++.+-.+=-|-+- ..-+.+++.++++.+.. | +.-+|+|.| .+-+|.++..+...+
T Consensus 51 ~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~eEr~~vi~~~~~----g---rvpViaGvg~~st~eai~la~~A~~ 116 (344)
T 2hmc_A 51 RKGKELIADGMSAVVYCGSMGDW-------PLLTDEQRMEGVERLVK----A---GIPVIVGTGAVNTASAVAHAVHAQK 116 (344)
T ss_dssp HHHHHHHHTTCCCEEESSGGGTG-------GGSCHHHHHHHHHHHHH----T---TCCEEEECCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCccCcCh-------hhCCHHHHHHHHHHHhC----C---CCcEEEecCCCCHHHHHHHHHHHHh
Confidence 44556667777664322112220 12456777777776211 2 234788884 567888888888888
Q ss_pred cCCcEEEe
Q 017179 302 AGVDVMTF 309 (376)
Q Consensus 302 l~vd~v~~ 309 (376)
+|+|.+-+
T Consensus 117 ~Gadavlv 124 (344)
T 2hmc_A 117 VGAKGLMV 124 (344)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEE
Confidence 88886655
No 363
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=26.93 E-value=1.7e+02 Score=27.48 Aligned_cols=51 Identities=16% Similarity=0.185 Sum_probs=34.1
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeE
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSI 281 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~i 281 (376)
.+.++.|++.|++.+-.-+..-+. +...+.+..+++++.|++ .||.+--++
T Consensus 30 ~~~~~ilk~~G~n~vRlri~v~P~------~g~~d~~~~~~~~~~ak~---~Gl~v~ld~ 80 (334)
T 1fob_A 30 QALETILADAGINSIRQRVWVNPS------DGSYDLDYNLELAKRVKA---AGMSLYLDL 80 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEECSCCT------TCTTCHHHHHHHHHHHHH---TTCEEEEEE
T ss_pred chHHHHHHHcCCCEEEEEEEECCC------CCccCHHHHHHHHHHHHH---CCCEEEEEe
Confidence 456788888888776553321011 234678999999999999 577655554
No 364
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=26.40 E-value=4e+02 Score=24.88 Aligned_cols=87 Identities=9% Similarity=0.114 Sum_probs=51.3
Q ss_pred HHHHHHHHcCccccccccc---chHHHH-HhhcCC----CCCHHH----HHHHHHHHHHhCCCCceEEEeEEE----ecC
Q 017179 223 GCVREVAKSGLNVFAHNIE---TVEELQ-SAVRDH----RANFKQ----SLDVLMMAKDYVPAGTLTKTSIML----GCG 286 (376)
Q Consensus 223 e~l~~L~~aGld~i~h~lE---tv~~l~-~~vr~r----~~t~e~----~L~vl~~ak~~~p~Gi~tkt~imv----GlG 286 (376)
+..+.++++|.|.+..+.- ....++ +..+.| +.+.+. .+++++.+++.. + +++..-|=. .-|
T Consensus 148 ~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~-~pv~vris~~~~~~~g 225 (338)
T 1z41_A 148 QAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-D-GPLFVRVSASDYTDKG 225 (338)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-C-SCEEEEEECCCCSTTS
T ss_pred HHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-C-CcEEEEecCcccCCCC
Confidence 3456667889998865531 112221 111111 233433 377888888764 2 222222211 116
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEeec
Q 017179 287 ETPDQVVSTMEKVRAAGVDVMTFGQ 311 (376)
Q Consensus 287 ET~ee~~e~L~~Lrel~vd~v~~~q 311 (376)
.+.++..+.++.|.+.++|++++..
T Consensus 226 ~~~~~~~~~a~~l~~~Gvd~i~v~~ 250 (338)
T 1z41_A 226 LDIADHIGFAKWMKEQGVDLIDCSS 250 (338)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEec
Confidence 7899999999999999999999963
No 365
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=26.32 E-value=3.2e+02 Score=25.20 Aligned_cols=117 Identities=15% Similarity=0.216 Sum_probs=67.8
Q ss_pred HHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHH
Q 017179 166 AEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEE 245 (376)
Q Consensus 166 a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~ 245 (376)
+.++..+|.+-|+|... .+. ...+.++++..++..=.+.+++ . +.+.++...++|++.+..|--.
T Consensus 135 i~ea~~~GAD~VlLi~a---~L~---~~~l~~l~~~a~~lGl~~lvev----h--~~eEl~~A~~~ga~iIGinnr~--- 199 (272)
T 3tsm_A 135 VYEARSWGADCILIIMA---SVD---DDLAKELEDTAFALGMDALIEV----H--DEAEMERALKLSSRLLGVNNRN--- 199 (272)
T ss_dssp HHHHHHTTCSEEEEETT---TSC---HHHHHHHHHHHHHTTCEEEEEE----C--SHHHHHHHTTSCCSEEEEECBC---
T ss_pred HHHHHHcCCCEEEEccc---ccC---HHHHHHHHHHHHHcCCeEEEEe----C--CHHHHHHHHhcCCCEEEECCCC---
Confidence 44567899999988654 333 2446677777666421223333 1 5677888889999999776110
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHHHcCCcEEEeecCC
Q 017179 246 LQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (376)
Q Consensus 246 l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlG-ET~ee~~e~L~~Lrel~vd~v~~~qY~ 313 (376)
+.. -..+.+. ...+.+..|.++ -+|.+-| -|.+|+.. +.+.|++-+-+|..+
T Consensus 200 -l~t---~~~dl~~----~~~L~~~ip~~~----~vIaesGI~t~edv~~----l~~~Ga~gvLVG~al 252 (272)
T 3tsm_A 200 -LRS---FEVNLAV----SERLAKMAPSDR----LLVGESGIFTHEDCLR----LEKSGIGTFLIGESL 252 (272)
T ss_dssp -TTT---CCBCTHH----HHHHHHHSCTTS----EEEEESSCCSHHHHHH----HHTTTCCEEEECHHH
T ss_pred -Ccc---CCCChHH----HHHHHHhCCCCC----cEEEECCCCCHHHHHH----HHHcCCCEEEEcHHH
Confidence 000 1122333 333334344333 2344444 48888754 578999999998553
No 366
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=26.32 E-value=1.3e+02 Score=27.52 Aligned_cols=27 Identities=19% Similarity=0.293 Sum_probs=23.7
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEee
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSV 182 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg 182 (376)
..+++|.++.++++.+.|+++|++|-=
T Consensus 16 ~~~~~~sl~~~~~a~~~G~~~i~~T~H 42 (262)
T 3qy7_A 16 AGDSADSIEMARAAVRQGIRTIIATPH 42 (262)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEECCCB
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCC
Confidence 467888889999999999999999854
No 367
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=26.30 E-value=2.9e+02 Score=24.47 Aligned_cols=83 Identities=10% Similarity=0.182 Sum_probs=40.4
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEE-----EecCCC--------
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIM-----LGCGET-------- 288 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~im-----vGlGET-------- 288 (376)
.+.++.++++|.+.+.......... +.+...+.++.-++-+.+.+ .|+.+.+--. +.++..
T Consensus 33 ~~~l~~~~~~G~~~iEl~~~~~~~~---~~~~~~~~~~~~~~~~~l~~---~gl~i~~~~~~~~~~~~l~~~d~~~r~~~ 106 (295)
T 3cqj_A 33 LERLQLAKTLGFDFVEMSVDETDER---LSRLDWSREQRLALVNAIVE---TGVRVPSMCLSAHRRFPLGSEDDAVRAQG 106 (295)
T ss_dssp HHHHHHHHHTTCSEEEEECCSSHHH---HGGGGCCHHHHHHHHHHHHH---HCCEEEEEEEGGGGTSCTTCSSHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEecCCcccc---cCcccCCHHHHHHHHHHHHH---cCCeEEEEecCcccCCCCCCCCHHHHHHH
Confidence 5667777777777665543322111 11011233333344444444 2565433211 113221
Q ss_pred HHHHHHHHHHHHHcCCcEEEee
Q 017179 289 PDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 289 ~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
.+.+.+.++...++|+..|.+.
T Consensus 107 ~~~~~~~i~~A~~lG~~~v~~~ 128 (295)
T 3cqj_A 107 LEIMRKAIQFAQDVGIRVIQLA 128 (295)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEC
Confidence 2446666777777788777653
No 368
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=26.26 E-value=3.5e+02 Score=24.08 Aligned_cols=80 Identities=13% Similarity=0.230 Sum_probs=41.8
Q ss_pred hHHHHHHHHcCcccccccccc---------hH-HHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIET---------VE-ELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQ 291 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEt---------v~-~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee 291 (376)
.+.++.+.++|+|.+..++-. +. ...+.+. .+.+.+..++.++.+++.. . ++ ..+| +-....
T Consensus 35 ~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~-~g~~~~~~~~~i~~ir~~~-~-~P--v~~m---~~~~~~ 106 (262)
T 1rd5_A 35 AEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALA-SGTTMDAVLEMLREVTPEL-S-CP--VVLL---SYYKPI 106 (262)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHT-TTCCHHHHHHHHHHHGGGC-S-SC--EEEE---CCSHHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHH-cCCCHHHHHHHHHHHHhcC-C-CC--EEEE---ecCcHH
Confidence 445667777788877665311 11 1122233 4567788888888888742 1 33 1222 211112
Q ss_pred HHHHHHHHHHcCCcEEEe
Q 017179 292 VVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 292 ~~e~L~~Lrel~vd~v~~ 309 (376)
+...++.+.+.|+|.+.+
T Consensus 107 ~~~~~~~a~~aGadgv~v 124 (262)
T 1rd5_A 107 MFRSLAKMKEAGVHGLIV 124 (262)
T ss_dssp HSCCTHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 222233467777777666
No 369
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=26.13 E-value=90 Score=30.86 Aligned_cols=122 Identities=14% Similarity=0.173 Sum_probs=69.0
Q ss_pred CCchhHHHHHHH-HHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCC-CChHHHHHHHHcC-c
Q 017179 157 PDPDEPTNVAEA-IASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFR-GNNGCVREVAKSG-L 233 (376)
Q Consensus 157 l~~eEi~~~a~a-l~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~-g~~e~l~~L~~aG-l 233 (376)
++++|..+.++. +.+.++- ..+-| ++....+.+..+-+.+.. .+.| ...+.. .+.+.++.+.+.+ +
T Consensus 261 ~t~~eai~~~~~ll~~y~i~-----~IEdP-l~~dD~e~~~~L~~~~g~---~ipI--~gDE~~~tn~~~~~~~i~~~a~ 329 (417)
T 3qn3_A 261 FSSEALIERYVELCAKYPIC-----SIEDG-LAENDFEGWIKLTEKLGN---KIQL--VGDDLFVTNEDILREGIIKKMA 329 (417)
T ss_dssp ECHHHHHHHHHHHHHHSCEE-----EEESS-SCTTCHHHHHHHHHHHTT---TSEE--EESTTTTTCHHHHHHHHHHTCC
T ss_pred cCHHHHHHHHHHHHhhccee-----EEecC-CCcccHHHHHHHHHhhCC---CCce--ecCCcccCCHHHHHHHHHhCCC
Confidence 678888888887 6776633 33322 221113334444433311 2333 344432 2477777776654 3
Q ss_pred ccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--CCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 234 NVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--GETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 234 d~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl--GET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
|++.. ++. +-.+..+.+++.+.|+. .|+ .+|+|+ |||++.++..|.. .++..++..
T Consensus 330 d~i~i----------Kv~-qiGGiTea~kia~lA~~---~G~----~v~vsh~sgEt~d~~iadlav--a~~~~~ik~ 387 (417)
T 3qn3_A 330 NAVLI----------KPN-QIGTITQTMRTVRLAQR---NNY----KCVMSHRSGESEDAFIADFAV--ALNTGQIKT 387 (417)
T ss_dssp SEEEE----------CHH-HHCSHHHHHHHHHHHHH---TTC----EEEEECCSSCCSCCHHHHHHH--HTTCSEEEC
T ss_pred CEEEe----------cCC-CCCCHHHHHHHHHHHHH---cCC----eEEEeCCCCCchHHHHHHHHH--HhCCCcccc
Confidence 44433 222 23568999999999999 465 467787 9999888765543 334434433
No 370
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=26.03 E-value=1.2e+02 Score=29.00 Aligned_cols=144 Identities=16% Similarity=0.158 Sum_probs=78.0
Q ss_pred CchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhC-CCcEEEEecCCCCC--Ch----HHHHHHHH
Q 017179 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRG--NN----GCVREVAK 230 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~-p~i~Ie~l~pd~~g--~~----e~l~~L~~ 230 (376)
++++..+.++.+.+.|++.+-|-.|.. + .+. .+.|++|++.. |++.+.+ |.++ +. +.++.|.+
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~~-~-----~~~-~e~v~avr~a~g~d~~l~v---Dan~~~~~~~a~~~~~~l~~ 233 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPVA-D-----DGP-AAEIANLRQVLGPQAKIAA---DMHWNQTPERALELIAEMQP 233 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGC-T-----TCH-HHHHHHHHHHHCTTSEEEE---ECCSCSCHHHHHHHHHHHGG
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCC-C-----hHH-HHHHHHHHHHhCCCCEEEE---ECCCCCCHHHHHHHHHHHhh
Confidence 678888899999999999988865531 1 235 78899998865 5665543 2211 32 23344444
Q ss_pred cCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 231 SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 231 aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
.|++.+ |- - +. ..+ ++.++.+++.. +++ |+ .+|+.....+..+.+++-.+|+|.+-
T Consensus 234 ~~i~~i----Eq---P---~~--~~d----~~~~~~l~~~~--~iP----I~--~dE~~~~~~~~~~~i~~~~~d~v~ik 289 (388)
T 2nql_A 234 FDPWFA----EA---P---VW--TED----IAGLEKVSKNT--DVP----IA--VGEEWRTHWDMRARIERCRIAIVQPE 289 (388)
T ss_dssp GCCSCE----EC---C---SC--TTC----HHHHHHHHTSC--CSC----EE--ECTTCCSHHHHHHHHTTSCCSEECCC
T ss_pred cCCCEE----EC---C---CC--hhh----HHHHHHHHhhC--CCC----EE--EeCCcCCHHHHHHHHHcCCCCEEEec
Confidence 454433 21 0 11 122 34445555521 122 22 33443333344444455567777652
Q ss_pred cCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhc
Q 017179 311 QYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVA 347 (376)
Q Consensus 311 qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~ 347 (376)
|.+ + -..+...+..+|++.|...+.
T Consensus 290 ----~~~-G-------Git~~~~i~~~A~~~g~~~~~ 314 (388)
T 2nql_A 290 ----MGH-K-------GITNFIRIGALAAEHGIDVIP 314 (388)
T ss_dssp ----HHH-H-------CHHHHHHHHHHHHHHTCEECC
T ss_pred ----CCC-C-------CHHHHHHHHHHHHHcCCeEEe
Confidence 222 2 145667777777877776544
No 371
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=26.01 E-value=1.4e+02 Score=27.47 Aligned_cols=127 Identities=17% Similarity=0.210 Sum_probs=66.5
Q ss_pred HHHHHHHHCCC--cEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccccc
Q 017179 164 NVAEAIASWGL--DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIE 241 (376)
Q Consensus 164 ~~a~al~~~G~--~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lE 241 (376)
...+.+.+.|+ ..++|-=.+...+.+ .+.+.+.++.+++. ++.| .+-||......+..|....+|.+-+-
T Consensus 134 ~l~~~l~~~~~~~~~l~lEItE~~~~~~--~~~~~~~l~~Lr~~--G~~i--alDDFGtG~ssl~~L~~l~~d~iKID-- 205 (294)
T 2r6o_A 134 AVDRALARSGLRPDCLELEITENVMLVM--TDEVRTCLDALRAR--GVRL--ALDDFGTGYSSLSYLSQLPFHGLKID-- 205 (294)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEGGGGGGC--CHHHHHHHHHHHHH--TCEE--EEEEETSSCBCHHHHHHSCCCEEEEC--
T ss_pred HHHHHHHHcCCCcCEEEEEEeCCchhhC--hHHHHHHHHHHHHC--CCEE--EEECCCCCchhHHHHHhCCCCEEEEC--
Confidence 34445566676 445443223222222 34577888888876 3444 33344322334677777788877652
Q ss_pred chHHHHHhhcCCCCCHHHHH-HHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecCC
Q 017179 242 TVEELQSAVRDHRANFKQSL-DVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (376)
Q Consensus 242 tv~~l~~~vr~r~~t~e~~L-~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY~ 313 (376)
..+...+. ........+ .++..++. .|+.|-+- --||.+++ +.|+++|++.+ =|.|+
T Consensus 206 --~sfv~~i~-~~~~~~~iv~~ii~la~~---lg~~vvAE----GVEt~~q~----~~l~~lG~d~~-QGy~~ 263 (294)
T 2r6o_A 206 --QSFVRKIP-AHPSETQIVTTILALARG---LGMEVVAE----GIETAQQY----AFLRDRGCEFG-QGNLM 263 (294)
T ss_dssp --HHHHTTTT-TSHHHHHHHHHHHHHHHH---TTCEEEEC----CCCSHHHH----HHHHHTTCCEE-CSTTT
T ss_pred --HHHHhhhh-cChHHHHHHHHHHHHHHH---CCCEEEEe----cCCcHHHH----HHHHHcCCCEE-EcCcc
Confidence 13333343 111122223 34556666 35543222 23888775 56788999976 34444
No 372
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=25.91 E-value=3.4e+02 Score=23.89 Aligned_cols=105 Identities=16% Similarity=0.190 Sum_probs=62.0
Q ss_pred HHHHHHHHHCCC-cEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccccc
Q 017179 163 TNVAEAIASWGL-DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIE 241 (376)
Q Consensus 163 ~~~a~al~~~G~-~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lE 241 (376)
..+++.+.+.|+ +.++++|-+ .+.++.+++..|.+.+..+..+. ..+ .+...|++.+..+..
T Consensus 118 ~~v~~~l~~~~~~~~v~~~Sf~------------~~~l~~~~~~~p~~~~~~l~~~~--~~~---~~~~~~~~~~~~~~~ 180 (238)
T 3no3_A 118 RLSVQMVKRMKLAKRTDYISFN------------MDACKEFIRLCPKSEVSYLNGEL--SPM---ELKELGFTGLDYHYK 180 (238)
T ss_dssp HHHHHHHHHTTCGGGEEEEESC------------HHHHHHHHHHCTTSCEEECSSCS--CHH---HHHHTTCCEEEEEHH
T ss_pred HHHHHHHHHcCCcCCEEEEECC------------HHHHHHHHHHCCCCeEEEEeCCC--CHH---HHHHCCCceEeccHH
Confidence 345666777787 667777642 24577788888988887776554 332 345556554433211
Q ss_pred chHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 242 TVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 242 tv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
.+ .+. -+.++.+++ .|+.+...-+ .+. +.++.+.+.|||.|.-
T Consensus 181 ----~~-~~~---------~~~v~~~~~---~G~~v~~WTV----n~~----~~~~~l~~~GVdgIiT 223 (238)
T 3no3_A 181 ----VL-QSH---------PDWVKDCKV---LGMTSNVWTV----DDP----KLMEEMIDMGVDFITT 223 (238)
T ss_dssp ----HH-HHS---------TTHHHHHHH---TTCEEEEECC----CSH----HHHHHHHHHTCSEEEE
T ss_pred ----hh-hCC---------HHHHHHHHH---CCCEEEEECC----CCH----HHHHHHHHcCCCEEEC
Confidence 10 111 146778888 4776655432 233 3566677889998754
No 373
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=25.86 E-value=45 Score=29.94 Aligned_cols=141 Identities=10% Similarity=0.065 Sum_probs=71.2
Q ss_pred hhHHHHHHHHHHCCCcEEEEEeeeCC---CCC--cccHHHHHHHHHHHHhhC--CCcEE--EEec---CCCCCChH-HHH
Q 017179 160 DEPTNVAEAIASWGLDYVVITSVDRD---DLA--DQGSGHFAQTVRKLKELK--PNMLI--EALV---PDFRGNNG-CVR 226 (376)
Q Consensus 160 eEi~~~a~al~~~G~~eIvLTsg~r~---dl~--d~g~~~~~elvr~Ik~~~--p~i~I--e~l~---pd~~g~~e-~l~ 226 (376)
+.+.+.++.+..+|++.|++.+|... ..+ +...+.+.+.++.+.+.. -++.+ |-.. ..+..+.+ .+.
T Consensus 104 ~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~~ 183 (287)
T 3kws_A 104 DTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPLNRKECFYLRQVADAAS 183 (287)
T ss_dssp HHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTTTCSSCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHH
Confidence 55667778888999999998665321 111 112344555555543321 13433 3222 12222444 444
Q ss_pred HHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEe---EEEecCCCHHHHHHHHHHHHHcC
Q 017179 227 EVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTS---IMLGCGETPDQVVSTMEKVRAAG 303 (376)
Q Consensus 227 ~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~---imvGlGET~ee~~e~L~~Lrel~ 303 (376)
.+.+.+.+.+...+|+..-... +.+..++++.+ ...... +.++-. ...|-|+..-++.+.++.|++.+
T Consensus 184 ll~~v~~~~vg~~~D~~h~~~~-----g~d~~~~l~~~---~~~i~~-vHlkD~~~r~~pG~G~d~id~~~i~~~L~~~g 254 (287)
T 3kws_A 184 LCRDINNPGVRCMGDFWHMTWE-----ETSDMGAFISG---GEYLQH-VHVASRKRRSMPGEDGDADNYINGFKGLKMIG 254 (287)
T ss_dssp HHHHHCCTTEEEEEEHHHHHHH-----CSCHHHHHHHH---GGGEEE-EEECCTTTSCSTTTTGGGCCCHHHHHHHHHTT
T ss_pred HHHHcCCCCeeEEeehHHHHhc-----CCCHHHHHHHh---hhhEEE-EEeCCCCCCCCCCCCCCCcCHHHHHHHHHHcC
Confidence 4445555556666776553321 34455544433 332211 333332 12344431156777888888888
Q ss_pred Cc-EEEe
Q 017179 304 VD-VMTF 309 (376)
Q Consensus 304 vd-~v~~ 309 (376)
.+ .+.+
T Consensus 255 y~g~i~l 261 (287)
T 3kws_A 255 YNNYVSF 261 (287)
T ss_dssp CCSEEEE
T ss_pred CCccEEE
Confidence 87 4555
No 374
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=25.63 E-value=2.9e+02 Score=27.62 Aligned_cols=81 Identities=19% Similarity=0.252 Sum_probs=52.8
Q ss_pred cEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCC
Q 017179 209 MLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGET 288 (376)
Q Consensus 209 i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET 288 (376)
+.+.+..+......+.++.+.++|+|.+..+.- + ...+..++.++.+++.+|. +.+ ++|-.-|
T Consensus 220 L~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a---------~---g~~~~~~~~i~~ir~~~p~-~~V----i~g~v~t 282 (496)
T 4fxs_A 220 LRVGAAVGAAPGNEERVKALVEAGVDVLLIDSS---------H---GHSEGVLQRIRETRAAYPH-LEI----IGGNVAT 282 (496)
T ss_dssp BCCEEECCSSSCCHHHHHHHHHTTCSEEEEECS---------C---TTSHHHHHHHHHHHHHCTT-CCE----EEEEECS
T ss_pred eeeeeeeccccchHHHHHHHHhccCceEEeccc---------c---ccchHHHHHHHHHHHHCCC-ceE----EEcccCc
Confidence 344444433322578899999999998765411 1 1236778999999998764 443 3354456
Q ss_pred HHHHHHHHHHHHHcCCcEEEee
Q 017179 289 PDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 289 ~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
.++ .+.+.+.|+|.|.++
T Consensus 283 ~e~----a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 283 AEG----ARALIEAGVSAVKVG 300 (496)
T ss_dssp HHH----HHHHHHHTCSEEEEC
T ss_pred HHH----HHHHHHhCCCEEEEC
Confidence 655 466678899999884
No 375
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=25.57 E-value=3.3e+02 Score=25.60 Aligned_cols=68 Identities=13% Similarity=0.104 Sum_probs=46.2
Q ss_pred HHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCC-CcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 162 PTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 162 i~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
+...+.+.+.+|++-|-|-+..++. -.++|++|++..+ .+.|.+--+ ..+.+.++.+.++|+|.+-.+
T Consensus 188 ~~aYa~~gad~G~~lV~LD~~~~~v--------~~e~V~~I~~~~~~~iPV~vGGG--Irs~Eda~~ll~aGAD~VVVG 256 (286)
T 3vk5_A 188 IDRYLHVARAFGFHMVYLYSRNEHV--------PPEVVRHFRKGLGPDQVLFVSGN--VRSGRQVTEYLDSGADYVGFA 256 (286)
T ss_dssp HHHHHHHHHHTTCSEEEEECSSSCC--------CHHHHHHHHHHSCTTCEEEEESS--CCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCcC--------CHHHHHHHHHhcCCCCCEEEEeC--CCCHHHHHHHHHcCCCEEEEC
Confidence 3677888888898888776543211 2468888887653 455543222 227899999999999988665
No 376
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=25.48 E-value=1.7e+02 Score=27.78 Aligned_cols=62 Identities=16% Similarity=0.239 Sum_probs=42.0
Q ss_pred HHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 164 ~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
+.++++.+.|++-|.|- ... .+.+.+.++.++ +.+.++++-+ . +.+.+..+++.|+|.+..+
T Consensus 218 ~e~~eAl~aGaDiImLD-----n~s---~~~l~~av~~~~---~~v~leaSGG-I--t~~~i~~~A~tGVD~IsvG 279 (300)
T 3l0g_A 218 SQVEESLSNNVDMILLD-----NMS---ISEIKKAVDIVN---GKSVLEVSGC-V--NIRNVRNIALTGVDYISIG 279 (300)
T ss_dssp HHHHHHHHTTCSEEEEE-----SCC---HHHHHHHHHHHT---TSSEEEEESS-C--CTTTHHHHHTTTCSEEECG
T ss_pred HHHHHHHHcCCCEEEEC-----CCC---HHHHHHHHHhhc---CceEEEEECC-C--CHHHHHHHHHcCCCEEEeC
Confidence 45555667788888772 222 455666666664 4678886443 3 6778999999999998654
No 377
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=25.36 E-value=1.3e+02 Score=26.62 Aligned_cols=133 Identities=13% Similarity=0.235 Sum_probs=72.1
Q ss_pred CchhHHHHHHHHHHCCC--cEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccc
Q 017179 158 DPDEPTNVAEAIASWGL--DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNV 235 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~--~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~ 235 (376)
+++-+......+.+.|+ ..++|-=.+.....+ ...+.+.++.+++. ++.| .+-||......+..|....+|.
T Consensus 108 ~~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~--~~~~~~~l~~L~~~--G~~i--alDdfG~g~s~l~~L~~l~~d~ 181 (250)
T 4f3h_A 108 DPQMIDTIREQLAVYGVPGERLWLQTPESKVFTH--LRNAQQFLASVSAM--GCKV--GLEQFGSGLDSFQLLAHFQPAF 181 (250)
T ss_dssp CHHHHHHHHHHHHHTTCCGGGEEEEEEHHHHHHS--HHHHHHHHHHHHTT--TCEE--EEEEETSSTHHHHHHTTSCCSE
T ss_pred CcHHHHHHHHHHHHcCCCcceEEEEEechhhhcC--HHHHHHHHHHHHHC--CCEE--EEeCCCCCchHHHHHhhCCCCE
Confidence 34334444555667776 556654333221111 34567778888764 3444 4445544456788888888887
Q ss_pred ccccccchHHHHHhhcCCCCCHHHHH-HHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecCC
Q 017179 236 FAHNIETVEELQSAVRDHRANFKQSL-DVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQYM 313 (376)
Q Consensus 236 i~h~lEtv~~l~~~vr~r~~t~e~~L-~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY~ 313 (376)
+-.. ..+...+. ........+ .++..++.. |+.+ ++---||.+++ +.|+++|++.+- |.|+
T Consensus 182 iKiD----~~~v~~~~-~~~~~~~~l~~i~~~a~~l---~~~v----iaeGVEt~~~~----~~l~~~G~~~~Q-G~~~ 243 (250)
T 4f3h_A 182 LKLD----RSITGDIA-SARESQEKIREITSRAQPT---GILT----VAEFVADAQSM----SSFFTAGVDYVQ-GDFV 243 (250)
T ss_dssp EEEC----HHHHTTTT-TCSHHHHHHHHTHHHHHHH---TCEE----EECCCCCHHHH----HHHHHHTCSEEC-STTT
T ss_pred EEEC----HHHHHhHh-cChhhHHHHHHHHHHHHHc---CCEE----EEeccCCHHHH----HHHHHcCCCEEe-eccc
Confidence 7552 24444444 122233333 344555553 4433 22223898875 567889999763 3444
No 378
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=25.36 E-value=4.4e+02 Score=25.01 Aligned_cols=146 Identities=17% Similarity=0.141 Sum_probs=80.8
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhC-CCcEEEEecCCCCC--Ch----HHHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRG--NN----GCVREVA 229 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~-p~i~Ie~l~pd~~g--~~----e~l~~L~ 229 (376)
.++++..+.++.+.+.|++.+-|=.|.. + .+.-.+.|++|++.. |++.+.+ |.++ +. +.++.|.
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~----~--~~~~~e~v~avR~a~G~~~~l~v---Dan~~~~~~~a~~~~~~l~ 214 (389)
T 2oz8_A 144 LDDDAFVSLFSHAASIGYSAFKIKVGHR----D--FDRDLRRLELLKTCVPAGSKVMI---DPNEAWTSKEALTKLVAIR 214 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCS----S--HHHHHHHHHHHHTTSCTTCEEEE---ECTTCBCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCC----C--HHHHHHHHHHHHHhhCCCCeEEE---ECCCCCCHHHHHHHHHHHH
Confidence 4688999999999999999998865531 1 344578899999876 5666553 2221 22 2344455
Q ss_pred HcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 230 KSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 230 ~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
++|.+.. .+|- - +. ..+ ++.++.+++..+ ++=|-.+|+. ...+..+.++.-.+|+|.+
T Consensus 215 ~~g~~i~--~iEq---P---~~--~~~----~~~~~~l~~~~~-------~iPIa~dE~~-~~~~~~~~i~~~~~d~v~i 272 (389)
T 2oz8_A 215 EAGHDLL--WVED---P---IL--RHD----HDGLRTLRHAVT-------WTQINSGEYL-DLQGKRLLLEAHAADILNV 272 (389)
T ss_dssp HTTCCCS--EEES---C---BC--TTC----HHHHHHHHHHCC-------SSEEEECTTC-CHHHHHHHHHTTCCSEEEE
T ss_pred hcCCCce--EEeC---C---CC--CcC----HHHHHHHHhhCC-------CCCEEeCCCC-CHHHHHHHHHcCCCCEEEE
Confidence 5222211 1231 0 11 122 334444444210 1223334555 4444555556666787766
Q ss_pred ecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhcc
Q 017179 310 GQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVAS 348 (376)
Q Consensus 310 ~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~s 348 (376)
. . -..+...+..+|++.|...+.+
T Consensus 273 k-------------G--Git~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 273 H-------------G--QVTDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp C-------------S--CHHHHHHHHHHHHHHTCCEEEC
T ss_pred C-------------c--CHHHHHHHHHHHHHcCCeEeec
Confidence 2 1 1335666777788877776655
No 379
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=25.26 E-value=2.1e+02 Score=26.52 Aligned_cols=74 Identities=11% Similarity=-0.010 Sum_probs=48.2
Q ss_pred CCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCccc--HHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCc
Q 017179 156 PPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQG--SGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGL 233 (376)
Q Consensus 156 ~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g--~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGl 233 (376)
.|+.+|+.+.++...+.|.++|--..|-.. +| .+. .+++++.- .+.+.|.+.-+-- +.+....+.++|+
T Consensus 169 ~Lt~eei~~A~~ia~eaGADfVKTSTGf~~----~GAT~ed-V~lm~~~v--g~~v~VKaAGGIr--t~~~al~mi~aGA 239 (260)
T 3r12_A 169 YLDTEEKIAACVISKLAGAHFVKTSTGFGT----GGATAED-VHLMKWIV--GDEMGVKASGGIR--TFEDAVKMIMYGA 239 (260)
T ss_dssp GCCHHHHHHHHHHHHHTTCSEEECCCSSSS----CCCCHHH-HHHHHHHH--CTTSEEEEESSCC--SHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHhCcCEEEcCCCCCC----CCCCHHH-HHHHHHHh--CCCceEEEeCCCC--CHHHHHHHHHcCC
Confidence 367899999899999999999986544211 12 111 22333321 2467787765533 5677888899999
Q ss_pred ccccc
Q 017179 234 NVFAH 238 (376)
Q Consensus 234 d~i~h 238 (376)
++++-
T Consensus 240 ~RiGt 244 (260)
T 3r12_A 240 DRIGT 244 (260)
T ss_dssp SEEEE
T ss_pred ceeec
Confidence 98754
No 380
>3cl6_A PUUE allantoinase; URIC acid, nitrogen fixation, hydrolase; 1.58A {Pseudomonas fluorescens} PDB: 3cl7_A 3cl8_A 1z7a_A
Probab=25.19 E-value=1.2e+02 Score=28.16 Aligned_cols=143 Identities=15% Similarity=0.060 Sum_probs=68.9
Q ss_pred HHHHHHHHCCCcEEEEEeeeCCCCCcccH----HHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcC-c-----
Q 017179 164 NVAEAIASWGLDYVVITSVDRDDLADQGS----GHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG-L----- 233 (376)
Q Consensus 164 ~~a~al~~~G~~eIvLTsg~r~dl~d~g~----~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG-l----- 233 (376)
+.++++.+.| .+|-.=|-.+.++..... +.+.+..+.|++....-......|.+ ++..++.|++.| .
T Consensus 111 ~~v~~i~~~G-heIg~Ht~~H~~~~~~s~~~~~~ei~~~~~~l~~~~G~~p~g~r~~~~--~~~~~~~l~~~G~~~y~ss 187 (308)
T 3cl6_A 111 DVIRAMVAAG-HEICSHGYRWIDYQYMDEAQEREHMLEAIRILTELTGERPLGWYTGRT--GPNTRRLVMEEGGFLYDCD 187 (308)
T ss_dssp HHHHHHHHTT-CEEEECCSSSSCCTTCCHHHHHHHHHHHHHHHHHHHSSCCSEECCSSC--CTTHHHHHHHHCCCSEECC
T ss_pred HHHHHHHHcC-CEEEeCCCCCcccccCCHHHHHHHHHHHHHHHHHHhCCCcceEECCCC--CHHHHHHHHHCCCceEEec
Confidence 3566777888 577555555555543222 23444445555443111111223544 677888888888 2
Q ss_pred -------------------ccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHh-CCCCc-eEEEeEEEec------C
Q 017179 234 -------------------NVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDY-VPAGT-LTKTSIMLGC------G 286 (376)
Q Consensus 234 -------------------d~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~-~p~Gi-~tkt~imvGl------G 286 (376)
-.++.++++.+-.+.... +..+.++.++.+...-+. .-.|- .=+.-+|+.+ .
T Consensus 188 ~~~~d~Py~~~~~~~~~~~~~iP~~~~~~D~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~g~~~p~~~~Il~H~~~~g~~ 266 (308)
T 3cl6_A 188 TYDDDLPYWEPNNPTGKPHLVIPYTLDTNDMRFTQVQ-GFNKGDDFFEYLKDAFDVLYAEGAEAPKMLSIGLHCRLIGRP 266 (308)
T ss_dssp CCCCSSCEECSCCTTCSCCEECCCCSSSBGGGGGSSS-CCSSHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEEHHHHTSH
T ss_pred cCCCCCceeeecCCCCCCEEEEccccccCceeeeccC-CCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeCccccCCH
Confidence 124444555453222111 234667666655443210 00121 0011122222 2
Q ss_pred CCHHHHHHHHHHHHHcC-CcEEEee
Q 017179 287 ETPDQVVSTMEKVRAAG-VDVMTFG 310 (376)
Q Consensus 287 ET~ee~~e~L~~Lrel~-vd~v~~~ 310 (376)
.+.+-+.+.|+.|++.+ +.++++.
T Consensus 267 ~~~~aL~~~l~~l~~~g~v~~~T~~ 291 (308)
T 3cl6_A 267 ARLAALQRFIEYAKSHEQVWFTRRV 291 (308)
T ss_dssp HHHHHHHHHHHHHHTSSSEEECCHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEecHH
Confidence 35666777777787776 5555553
No 381
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=25.17 E-value=2.3e+02 Score=21.66 Aligned_cols=39 Identities=5% Similarity=-0.008 Sum_probs=26.5
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++.|++..|.+.|-+++..- +.+......++|++.|
T Consensus 64 ~~l~~~l~~~~~~~~ii~ls~~~--~~~~~~~~~~~ga~~~ 102 (137)
T 3cfy_A 64 EDVLDWINQNDIPTSVIIATAHG--SVDLAVNLIQKGAEDF 102 (137)
T ss_dssp HHHHHHHHHTTCCCEEEEEESSC--CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhcCCCCCEEEEEecC--cHHHHHHHHHCCccEE
Confidence 36777887777777776666543 5566677778887644
No 382
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=24.99 E-value=2.3e+02 Score=25.59 Aligned_cols=115 Identities=17% Similarity=0.274 Sum_probs=53.8
Q ss_pred HHHHHHCCCcEEEEEeee-CCCCCcccHHHHHHHHHHHHhhCC-CcEEEEecCCCCCChHHHHHHHHcCcccccccccch
Q 017179 166 AEAIASWGLDYVVITSVD-RDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETV 243 (376)
Q Consensus 166 a~al~~~G~~eIvLTsg~-r~dl~d~g~~~~~elvr~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv 243 (376)
++.+.++|. |.|+. +|.+-..+...|.+.+++|.+..+ .+.+++..-|..+..+..++|.+..
T Consensus 25 i~~~~~~g~----i~GvTTNPsi~~k~g~~~~~~i~ei~~iv~G~VS~EV~a~d~e~mi~eA~~L~~~~----------- 89 (230)
T 1vpx_A 25 IKKGVEWGI----VDGVTTNPTLISKEGAEFKQRVKEICDLVKGPVSAEVVSLDYEGMVREARELAQIS----------- 89 (230)
T ss_dssp HHHHHHTTC----CCEEECCC-----------CHHHHHHHHHCSCEEEECSCCSHHHHHHHHHHHHTTC-----------
T ss_pred HHHHHhcCC----cCCCccCHHHHHhcCCCHHHHHHHHHhccCCcEEEEEccCCHHHHHHHHHHHHHhC-----------
Confidence 445556665 33443 444422111346677777777643 3555554222211112222333322
Q ss_pred HHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 244 EELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 244 ~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
++++ |+ -..++ +=++.++.+.+ .|+.++.++|+.+ ++-+.. .+.|.+++.++
T Consensus 90 ~nv~--IK-IP~T~-eGl~Ai~~L~~---eGI~vNvTliFS~----~QA~la----a~AGa~~iSpF 141 (230)
T 1vpx_A 90 EYVV--IK-IPMTP-DGIKAVKTLSA---EGIKTNVTLVFSP----AQAILA----AKAGATYVSPF 141 (230)
T ss_dssp TTEE--EE-EESSH-HHHHHHHHHHH---TTCCEEEEEECSH----HHHHHH----HHHTCSEEEEB
T ss_pred CCEE--EE-eCCCH-HHHHHHHHHHH---CCCCEEEEEeCCH----HHHHHH----HhCCCeEEEec
Confidence 2222 22 12453 44777777777 5899999999744 443222 25577777653
No 383
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=24.95 E-value=2.7e+02 Score=24.74 Aligned_cols=117 Identities=13% Similarity=0.139 Sum_probs=66.6
Q ss_pred HHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccc---cc
Q 017179 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH---NI 240 (376)
Q Consensus 164 ~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h---~l 240 (376)
+.++++.+.|++.|+|-+..+.+ ++ .+.++++.+++. ++.+-+-. . +.+.++...++|+|.+.. +.
T Consensus 92 ~~i~~~~~aGad~I~l~~~~~~~-p~----~l~~~i~~~~~~--g~~v~~~v--~--t~eea~~a~~~Gad~Ig~~~~g~ 160 (229)
T 3q58_A 92 QDVDALAQAGADIIAFDASFRSR-PV----DIDSLLTRIRLH--GLLAMADC--S--TVNEGISCHQKGIEFIGTTLSGY 160 (229)
T ss_dssp HHHHHHHHHTCSEEEEECCSSCC-SS----CHHHHHHHHHHT--TCEEEEEC--S--SHHHHHHHHHTTCSEEECTTTTS
T ss_pred HHHHHHHHcCCCEEEECccccCC-hH----HHHHHHHHHHHC--CCEEEEec--C--CHHHHHHHHhCCCCEEEecCccC
Confidence 34566778999988876654321 11 256677777764 34332221 1 567788889999999953 33
Q ss_pred cchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHHHcCCcEEEeecC
Q 017179 241 ETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVRAAGVDVMTFGQY 312 (376)
Q Consensus 241 Etv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlG-ET~ee~~e~L~~Lrel~vd~v~~~qY 312 (376)
.+.. +....+ ++.++.+++. +++ +|..-| -|.+++.+.+ +.|++-+-+|..
T Consensus 161 t~~~------~~~~~~----~~li~~l~~~---~ip----vIA~GGI~t~~d~~~~~----~~GadgV~VGsa 212 (229)
T 3q58_A 161 TGPI------TPVEPD----LAMVTQLSHA---GCR----VIAEGRYNTPALAANAI----EHGAWAVTVGSA 212 (229)
T ss_dssp SSSC------CCSSCC----HHHHHHHHTT---TCC----EEEESSCCSHHHHHHHH----HTTCSEEEECHH
T ss_pred CCCC------cCCCCC----HHHHHHHHHc---CCC----EEEECCCCCHHHHHHHH----HcCCCEEEEchH
Confidence 2211 111233 3555555552 232 222223 3677776654 569998888744
No 384
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=24.89 E-value=1.5e+02 Score=22.49 Aligned_cols=39 Identities=8% Similarity=0.130 Sum_probs=26.8
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++.|++..|.+.|-++++.. +.+......++|++.|
T Consensus 75 ~~~~~~l~~~~~~~~ii~~s~~~--~~~~~~~~~~~g~~~~ 113 (135)
T 3snk_A 75 KPGIVEARALWATVPLIAVSDEL--TSEQTRVLVRMNASDW 113 (135)
T ss_dssp STTHHHHHGGGTTCCEEEEESCC--CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhhCCCCcEEEEeCCC--CHHHHHHHHHcCcHhh
Confidence 35677788777777776666654 5666777778887654
No 385
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=24.79 E-value=3e+02 Score=22.84 Aligned_cols=58 Identities=19% Similarity=0.133 Sum_probs=39.7
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHH
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD 269 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~ 269 (376)
.++++.|++..|.+.|-+++..- +.+.+....++|++.| +. +..+.++.+..++.+.+
T Consensus 67 ~~~~~~lr~~~~~~~ii~ls~~~--~~~~~~~~~~~Ga~~~-------------l~-Kp~~~~~L~~~i~~~~~ 124 (215)
T 1a04_A 67 LETLDKLREKSLSGRIVVFSVSN--HEEDVVTALKRGADGY-------------LL-KDMEPEDLLKALHQAAA 124 (215)
T ss_dssp HHHHHHHHHSCCCSEEEEEECCC--CHHHHHHHHHTTCSEE-------------EE-TTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcEEEEECCC--CHHHHHHHHHcCCcEE-------------Ee-CCCCHHHHHHHHHHHHc
Confidence 46778888777777776666543 5566667777887654 22 34677777788877766
No 386
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=24.78 E-value=1.3e+02 Score=26.96 Aligned_cols=78 Identities=12% Similarity=0.004 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHhhC-CCcEEEEecCCCCCChHHHHHHHH-cCcccccccccchHHHHHhhcC----CCCCHHHHHHHHHH
Q 017179 193 GHFAQTVRKLKELK-PNMLIEALVPDFRGNNGCVREVAK-SGLNVFAHNIETVEELQSAVRD----HRANFKQSLDVLMM 266 (376)
Q Consensus 193 ~~~~elvr~Ik~~~-p~i~Ie~l~pd~~g~~e~l~~L~~-aGld~i~h~lEtv~~l~~~vr~----r~~t~e~~L~vl~~ 266 (376)
..+.++++.+...+ ....|.++..+|....+..+.+.+ .|.|++=-.=-|..-+.+.+.- =..+.-+.|+.|..
T Consensus 22 ~~L~~~~~~i~~e~~~~~~I~vi~~~le~av~~a~~~~~~~~~dVIISRGgta~~Lr~~~~iPVV~I~vs~~Dil~aL~~ 101 (225)
T 2pju_A 22 TRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKKLANERCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQFLAK 101 (225)
T ss_dssp HHHHHHHHHHHTTTTTTCEEEEECCCHHHHHHHHHHHTTTSCCSEEEEEHHHHHHHHTTCSSCEEEECCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCceEEEecCcHHHHHHHHHHHHhcCCCeEEEeCChHHHHHHhhCCCCEEEecCCHHHHHHHHHH
Confidence 34666777766653 235566555555111112223223 2466541111122222222110 25678888888888
Q ss_pred HHHh
Q 017179 267 AKDY 270 (376)
Q Consensus 267 ak~~ 270 (376)
|++.
T Consensus 102 a~~~ 105 (225)
T 2pju_A 102 AGKL 105 (225)
T ss_dssp TTCT
T ss_pred HHhh
Confidence 8874
No 387
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=24.73 E-value=3e+02 Score=22.90 Aligned_cols=58 Identities=17% Similarity=0.138 Sum_probs=39.5
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHH
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD 269 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~ 269 (376)
.++++.|++..|.+.|-+++..- +.+.+....++|++.| +. +..+.++.+..++.+.+
T Consensus 59 ~~~~~~lr~~~~~~~ii~lt~~~--~~~~~~~~~~~ga~~~-------------l~-Kp~~~~~L~~~i~~~~~ 116 (220)
T 1p2f_A 59 YEICRMIKETRPETWVILLTLLS--DDESVLKGFEAGADDY-------------VT-KPFNPEILLARVKRFLE 116 (220)
T ss_dssp HHHHHHHHHHCTTSEEEEEESCC--SHHHHHHHHHHTCSEE-------------EE-SSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEEcCC--CHHHHHHHHHcCCCEE-------------EE-CCCCHHHHHHHHHHHHc
Confidence 46778888777888877777644 5566667777887654 22 34667777777777766
No 388
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=24.66 E-value=2.4e+02 Score=25.52 Aligned_cols=106 Identities=17% Similarity=0.204 Sum_probs=60.9
Q ss_pred CCchhHHHHHHHHHHCC----CcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCC-------ChHHH
Q 017179 157 PDPDEPTNVAEAIASWG----LDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG-------NNGCV 225 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G----~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g-------~~e~l 225 (376)
++.+++.+..+.+.++| ++. +++|-..+ ....+.+.++++.+++..|++.+ ++.|.+.. +++.+
T Consensus 57 ~~~~~~~~~~~~~~~~~~l~~~d~-v~~G~l~~---~~~~~~v~~~l~~~~~~~~~~~v-v~DPVm~~~~~~~~~~~~~~ 131 (289)
T 3pzs_A 57 MPASHLTDIVQGIADIDRLKDCDA-VLSGYIGS---PEQGSHILAAVAQVKQANPDAWY-FCDPVMGHPEKGCIVAPGVA 131 (289)
T ss_dssp CCHHHHHHHHHHHHHTTCGGGCCE-EEECCCSS---HHHHHHHHHHHHHHHHHCTTCEE-EECCCCEETTTEECSCHHHH
T ss_pred CCHHHHHHHHHHHHhcCCccCCCE-EEECCCCC---HHHHHHHHHHHHHHHhhCCCCeE-EEcCccccCCCCcccCHHHH
Confidence 67788888888888774 454 56764321 11245678888888877766544 24442211 33444
Q ss_pred HHHHH---cCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHh
Q 017179 226 REVAK---SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDY 270 (376)
Q Consensus 226 ~~L~~---aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~ 270 (376)
+.+++ ..+|++--|.+-...++.. .-.+.++..+..+.+.+.
T Consensus 132 ~~l~~~ll~~~diitpN~~E~~~L~g~---~~~~~~~~~~aa~~l~~~ 176 (289)
T 3pzs_A 132 EFFCNEALPASDMIAPNLLELEQLSGE---RVENVEQAVQVARSLCAR 176 (289)
T ss_dssp HHHHHTHHHHCSEECCCHHHHHHHHTS---CCCSHHHHHHHHHHHHTT
T ss_pred HHHHHHhhccCCEEeCCHHHHHHHhCC---CCCCHHHHHHHHHHHHHH
Confidence 43332 2467777776544555432 123566666777776663
No 389
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=24.61 E-value=2.9e+02 Score=25.51 Aligned_cols=15 Identities=27% Similarity=0.122 Sum_probs=7.8
Q ss_pred CHHHHHHHHHHHHHh
Q 017179 256 NFKQSLDVLMMAKDY 270 (376)
Q Consensus 256 t~e~~L~vl~~ak~~ 270 (376)
+.++++++++.+.+.
T Consensus 117 ~~~~~~~ll~~~l~~ 131 (276)
T 3o1n_A 117 TTGQYIDLNRAAVDS 131 (276)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc
Confidence 345555555555543
No 390
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=24.58 E-value=2.2e+02 Score=25.00 Aligned_cols=68 Identities=16% Similarity=0.264 Sum_probs=41.3
Q ss_pred HHHHHHHC--CCcEEEEEeeeC----CCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccc
Q 017179 165 VAEAIASW--GLDYVVITSVDR----DDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (376)
Q Consensus 165 ~a~al~~~--G~~eIvLTsg~r----~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h 238 (376)
.++.+... ++++|.+-++.. .... ....+.++++++..+++.|.+ .+.. +.+.+..+.++|+|++-.
T Consensus 128 ~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~----~~~l~~i~~~~~~~~~~pi~v-~GGI--~~~ni~~~~~aGaD~vvv 200 (228)
T 1h1y_A 128 EVFPLVEAENPVELVLVMTVEPGFGGQKFM----PEMMEKVRALRKKYPSLDIEV-DGGL--GPSTIDVAASAGANCIVA 200 (228)
T ss_dssp GGHHHHHSSSCCSEEEEESSCTTCSSCCCC----GGGHHHHHHHHHHCTTSEEEE-ESSC--STTTHHHHHHHTCCEEEE
T ss_pred HHHHHHhcCCCCCEEEEEeecCCCCcccCC----HHHHHHHHHHHHhcCCCCEEE-ECCc--CHHHHHHHHHcCCCEEEE
Confidence 34455565 889998865542 1111 123456777777665565543 3333 456788888899998765
Q ss_pred c
Q 017179 239 N 239 (376)
Q Consensus 239 ~ 239 (376)
+
T Consensus 201 G 201 (228)
T 1h1y_A 201 G 201 (228)
T ss_dssp S
T ss_pred C
Confidence 4
No 391
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=24.55 E-value=2.5e+02 Score=21.83 Aligned_cols=39 Identities=15% Similarity=0.181 Sum_probs=25.9
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++.|++..|.+.|-+++... +.+......++|++.|
T Consensus 63 ~~~~~~l~~~~~~~pii~ls~~~--~~~~~~~~~~~g~~~~ 101 (155)
T 1qkk_A 63 LALFRKILALDPDLPMILVTGHG--DIPMAVQAIQDGAYDF 101 (155)
T ss_dssp HHHHHHHHHHCTTSCEEEEECGG--GHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHhhCCCCCEEEEECCC--ChHHHHHHHhcCCCeE
Confidence 46777777777777776666543 4556666777887654
No 392
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=24.41 E-value=2.1e+02 Score=28.06 Aligned_cols=57 Identities=11% Similarity=0.055 Sum_probs=38.1
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCC-----CCc-ccHHHHHHHHHHHHhhC-CCcEEEE
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDD-----LAD-QGSGHFAQTVRKLKELK-PNMLIEA 213 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~d-----l~d-~g~~~~~elvr~Ik~~~-p~i~Ie~ 213 (376)
.++++..+.+++..+.|++.+-|-.+.... .+. ...+.-.+.|++|++.. |++.|.+
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~d~~L~v 208 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLF 208 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCCCCeEEE
Confidence 478999999999999999999985432100 000 01345677888898876 5666543
No 393
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=24.40 E-value=2.6e+02 Score=27.90 Aligned_cols=71 Identities=21% Similarity=0.375 Sum_probs=46.9
Q ss_pred CCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--CCCHHHHHHHHHHHHHcCCcEEEeecCCCCCCCCCCCcccCChHHH
Q 017179 254 RANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--GETPDQVVSTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAF 331 (376)
Q Consensus 254 ~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl--GET~ee~~e~L~~Lrel~vd~v~~~qY~~P~~~~~~v~~~v~pe~~ 331 (376)
-.+..+.+++++.|+. .|+ .+|+|+ |||++.++..|. -.++...+..| -|. + .+ .-.++
T Consensus 356 iGGITEalkaa~lA~~---~G~----~vmvsHrsgETeDt~iAdLA--Val~~gqIKtG---ap~-r----se--R~aKy 416 (441)
T 3qtp_A 356 IGTLTETFKTIKMAQE---KGW----GVMASHRSGETEDTFIADLV--VGLNCKQIKTG---APC-R----SE--RLCKY 416 (441)
T ss_dssp TCCHHHHHHHHHHHHH---TTC----EEEEECCSSCCSCCHHHHHH--HHTTCEEEECC---CSC-S----HH--HHHHH
T ss_pred cccHHHHHHHHHHHHH---cCC----eEEEeCCCCCccHhHHHHHH--HHhCCCccccC---CCc-c----hh--HHHHH
Confidence 4679999999999999 454 568888 999998875553 24444455544 121 0 01 12356
Q ss_pred HHHHHHHHHHhh
Q 017179 332 ERYRALGMEMGF 343 (376)
Q Consensus 332 ~~l~~~a~~~gf 343 (376)
++|..+.+++|-
T Consensus 417 NqLlrIeeelg~ 428 (441)
T 3qtp_A 417 NQLMRIEEELGN 428 (441)
T ss_dssp HHHHHHHHHHSS
T ss_pred HHHHHHHHHhCc
Confidence 777788888874
No 394
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=24.13 E-value=3.6e+02 Score=24.99 Aligned_cols=144 Identities=9% Similarity=0.084 Sum_probs=73.7
Q ss_pred HHHHHHHCCCcEEEEEeeeC--CCCC-----cccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccc
Q 017179 165 VAEAIASWGLDYVVITSVDR--DDLA-----DQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFA 237 (376)
Q Consensus 165 ~a~al~~~G~~eIvLTsg~r--~dl~-----d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~ 237 (376)
.+++..+.|++-|.+- |. .-+. +....++.++++.+++. |++.+-... -|+...+..+.+.|+|+++
T Consensus 184 ~~~~~~~aGad~i~i~--d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~-~g~~~i~~~---~g~~~~l~~l~~~g~d~~~ 257 (338)
T 2eja_A 184 YLKEQIKAGADVVQIF--DSWVNNLSLEDYGEYVYPYVNYLISELKDF-SDTPVIYFF---RGSSSFIDLAVDYRADALS 257 (338)
T ss_dssp HHHHHHHTTCSEEEEE--ETTGGGSCHHHHHHHTHHHHHHHHHHHHHH-CCCCEEEEE---SSHHHHHHHHTTSCCSEEE
T ss_pred HHHHHHHhCCCEEEEe--cCccccCCHHHHHHHhHHHHHHHHHHHhhc-CCCCEEEEc---CCcHHHHHHHHHcCCCEEE
Confidence 4455567899865442 21 0111 11234677778888876 444332222 1245678899999999875
Q ss_pred ccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHc-CCcEEEeecCCCCC
Q 017179 238 HNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAA-GVDVMTFGQYMRPS 316 (376)
Q Consensus 238 h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel-~vd~v~~~qY~~P~ 316 (376)
. +. ..+.++..+.+ +..+-.|+.. .++ -.|.|++.+..+.+-+. +..-=.+ +.|+
T Consensus 258 ~--d~-----------~~dl~~~~~~~---~~~l~Gn~dp--~~l---~gt~e~i~~~v~~~l~~~g~~~g~I---~~~g 313 (338)
T 2eja_A 258 V--DW-----------SVDIPELFKIY---DKGFQGNLEP--AVL---YASEEVIEEKTLGLLRRIPVKTRYV---FNLG 313 (338)
T ss_dssp C--CT-----------TSCHHHHHHHC---CSEEECCBCG--GGG---GSCHHHHHHHHHHHHTTCCCSSSEE---BCBS
T ss_pred e--CC-----------CCCHHHHHHhC---CeEEEECCCH--HHh---cCCHHHHHHHHHHHHHHhCCCCCeE---EeCC
Confidence 5 21 11222211211 1111123432 333 35889988888877654 4321011 2332
Q ss_pred CCCCCCcccCChHHHHHHHHHHHHH
Q 017179 317 KRHMPVSEYITPEAFERYRALGMEM 341 (376)
Q Consensus 317 ~~~~~v~~~v~pe~~~~l~~~a~~~ 341 (376)
.-+...++++....+.+.+.+.
T Consensus 314 ---~gi~~~~p~en~~a~v~~v~~~ 335 (338)
T 2eja_A 314 ---HGLAPDMELEKVKYLVDLVKSF 335 (338)
T ss_dssp ---SCCCTTSCHHHHHHHHHHHHTC
T ss_pred ---CCCCCCCCHHHHHHHHHHHHHh
Confidence 1233356788888887776653
No 395
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=24.11 E-value=1.2e+02 Score=27.90 Aligned_cols=47 Identities=17% Similarity=0.165 Sum_probs=33.0
Q ss_pred CCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHHHcCCcEEEe
Q 017179 255 ANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 255 ~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlG-ET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
-+.+++.++++.+.+ +.-+|+|.| .+-+|.++..+...+.|.|.+-+
T Consensus 47 Ls~~Er~~v~~~~~~--------rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv 94 (283)
T 2pcq_A 47 LTPEERARGLRALRP--------RKPFLVGLMEETLPQAEGALLEAKAAGAMALLA 94 (283)
T ss_dssp SCHHHHHHHHHTCCC--------SSCCEEEECCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred cCHHHHHHHHHHHHh--------CCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEe
Confidence 456777777777654 334677774 57788888888888888886555
No 396
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=23.97 E-value=3.6e+02 Score=25.28 Aligned_cols=125 Identities=11% Similarity=0.122 Sum_probs=68.3
Q ss_pred HHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecC----CCCCC-------hHHHHHHHHcC
Q 017179 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVP----DFRGN-------NGCVREVAKSG 232 (376)
Q Consensus 164 ~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~p----d~~g~-------~e~l~~L~~aG 232 (376)
+-+.++.+.|.+.|-|-+. +..+|...=..+++.+++.. ++.|.+++- ||.-+ .+.++.++++|
T Consensus 50 ~~a~~A~~gGAdRIELc~~----l~~GGlTPS~g~i~~a~~~~-~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~G 124 (287)
T 3iwp_A 50 ESAVNAERGGADRIELCSG----LSEGGTTPSMGVLQVVKQSV-QIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYG 124 (287)
T ss_dssp HHHHHHHHHTCSEEEECBC----GGGTCBCCCHHHHHHHHTTC-CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCEEEECCC----CCCCCCCCCHHHHHHHHHhc-CCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcC
Confidence 3456677889999998743 22222211235677776644 477776652 55444 34678889999
Q ss_pred cccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 233 LNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 233 ld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
+|.+-.+.=+.+ ...+.+...++++.++. +.++-+-= |.+.. |-.+.++.|.+++++.|-.
T Consensus 125 AdGvVfG~L~~d--------g~iD~~~~~~Li~~a~~-----l~vTFHRA--FD~~~-d~~~Ale~Li~lGvdrILT 185 (287)
T 3iwp_A 125 ADGLVFGALTED--------GHIDKELCMSLMAICRP-----LPVTFHRA--FDMVH-DPMAALETLLTLGFERVLT 185 (287)
T ss_dssp CSEEEECCBCTT--------SCBCHHHHHHHHHHHTT-----SCEEECGG--GGGCS-CHHHHHHHHHHHTCSEEEE
T ss_pred CCEEEEeeeCCC--------CCcCHHHHHHHHHHcCC-----CcEEEECc--hhccC-CHHHHHHHHHHcCCCEEEC
Confidence 998876631111 12344444555555432 33443331 11211 2445666666667775533
No 397
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=23.92 E-value=4e+02 Score=24.01 Aligned_cols=168 Identities=15% Similarity=0.124 Sum_probs=99.2
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCC------hHHHHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN------NGCVREVAK 230 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~------~e~l~~L~~ 230 (376)
.+.++|.+.++++.+.|+.-|++... +....+.++. .++.|....+.-.|. ....+...+
T Consensus 26 ~t~~~i~~lc~eA~~~~~~aVcV~p~------------~v~~a~~l~~--~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~ 91 (231)
T 3ndo_A 26 ATPSDVTALVDEAADLGVFAVCVSPP------------LVSVAAGVAP--SGLAIAAVAGFPSGKHVPGIKATEAELAVA 91 (231)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECGG------------GHHHHHHHCC--TTCEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcEEEECHH------------HHHHHHHhcC--CCCeEEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 57789999999999999999987421 2333433322 357777766433332 123344556
Q ss_pred cCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC---CCHHHHHHHHHHHHHcCCcEE
Q 017179 231 SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG---ETPDQVVSTMEKVRAAGVDVM 307 (376)
Q Consensus 231 aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlG---ET~ee~~e~L~~Lrel~vd~v 307 (376)
.|+|-+..-+ + +..+. ..+|+..++-|+.+++..+ |..+|.=+=.|+- -|++++....+...+.|.|+|
T Consensus 92 ~GAdEIDmVi---n--ig~lk--~g~~~~v~~ei~~v~~a~~-~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfV 163 (231)
T 3ndo_A 92 AGATEIDMVI---D--VGAAL--AGDLDAVSADITAVRKAVR-AATLKVIVESAALLEFSGEPLLADVCRVARDAGADFV 163 (231)
T ss_dssp TTCSEEEEEC---C--HHHHH--TTCHHHHHHHHHHHHHHTT-TSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEE
T ss_pred cCCCEEEEEe---e--hHhhh--cccHHHHHHHHHHHHHHcc-CCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEE
Confidence 6776543311 1 11233 3578888888888888764 4544432222332 289999999999999999999
Q ss_pred EeecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhccchhHhhh
Q 017179 308 TFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASGPMVRSS 355 (376)
Q Consensus 308 ~~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sgp~vrss 355 (376)
--..-+.|. . -.+++..+.+++... -.....+|| =+|+-
T Consensus 164 KTSTGf~~~-~------gAt~edv~lm~~~v~-~~v~VKaaG-GIrt~ 202 (231)
T 3ndo_A 164 KTSTGFHPS-G------GASVQAVEIMARTVG-ERLGVKASG-GIRTA 202 (231)
T ss_dssp ECCCSCCTT-C------SCCHHHHHHHHHHHT-TTSEEEEES-SCCSH
T ss_pred EcCCCCCCC-C------CCCHHHHHHHHHHhC-CCceEEEeC-CCCCH
Confidence 875323210 1 124566666666532 123344666 36643
No 398
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=23.90 E-value=2.9e+02 Score=24.58 Aligned_cols=117 Identities=13% Similarity=0.181 Sum_probs=66.4
Q ss_pred HHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc---c
Q 017179 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN---I 240 (376)
Q Consensus 164 ~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~---l 240 (376)
+.++++.+.|++.|+|-+..+.+ ++ .+.++++.+++. ++.+-+-. . +.+.++.+.++|+|.+..+ .
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~~~-p~----~l~~~i~~~~~~--g~~v~~~v--~--t~eea~~a~~~Gad~Ig~~~~g~ 160 (232)
T 3igs_A 92 DDVDALAQAGAAIIAVDGTARQR-PV----AVEALLARIHHH--HLLTMADC--S--SVDDGLACQRLGADIIGTTMSGY 160 (232)
T ss_dssp HHHHHHHHHTCSEEEEECCSSCC-SS----CHHHHHHHHHHT--TCEEEEEC--C--SHHHHHHHHHTTCSEEECTTTTS
T ss_pred HHHHHHHHcCCCEEEECccccCC-HH----HHHHHHHHHHHC--CCEEEEeC--C--CHHHHHHHHhCCCCEEEEcCccC
Confidence 34566778999988876654321 11 256677777664 33332211 1 5677888999999998533 3
Q ss_pred cchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHHHcCCcEEEeecC
Q 017179 241 ETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVRAAGVDVMTFGQY 312 (376)
Q Consensus 241 Etv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlG-ET~ee~~e~L~~Lrel~vd~v~~~qY 312 (376)
.+... ....+ ++.++.+++. +++ +|..-| -|.+++.+.+ +.|++-+-+|..
T Consensus 161 t~~~~------~~~~~----~~~i~~l~~~---~ip----vIA~GGI~t~~d~~~~~----~~GadgV~VGsa 212 (232)
T 3igs_A 161 TTPDT------PEEPD----LPLVKALHDA---GCR----VIAEGRYNSPALAAEAI----RYGAWAVTVGSA 212 (232)
T ss_dssp SSSSC------CSSCC----HHHHHHHHHT---TCC----EEEESCCCSHHHHHHHH----HTTCSEEEECHH
T ss_pred CCCCC------CCCCC----HHHHHHHHhc---CCc----EEEECCCCCHHHHHHHH----HcCCCEEEEehH
Confidence 22111 11233 3555555552 132 222223 3677776654 569999888744
No 399
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=23.74 E-value=1.7e+02 Score=28.29 Aligned_cols=71 Identities=10% Similarity=0.075 Sum_probs=49.2
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCC--CCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcC-c
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRD--DLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSG-L 233 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~--dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aG-l 233 (376)
.+.++..+.++++.+.|+.+|.++++..+ .++ .+ ++.|++... +.| +..+.+ +.+....+.+.| +
T Consensus 263 ~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~-------~~-~~~ir~~~~-iPv-i~~G~i--t~~~a~~~l~~g~a 330 (379)
T 3aty_A 263 NPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIG-------DV-VAWVRGSYS-GVK-ISNLRY--DFEEADQQIREGKV 330 (379)
T ss_dssp CHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCC-------CH-HHHHHTTCC-SCE-EEESSC--CHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCcc-------HH-HHHHHHHCC-CcE-EEECCC--CHHHHHHHHHcCCC
Confidence 56788889999999999999999886421 122 15 677777653 333 234455 677777777777 8
Q ss_pred cccccc
Q 017179 234 NVFAHN 239 (376)
Q Consensus 234 d~i~h~ 239 (376)
|.+..+
T Consensus 331 D~V~ig 336 (379)
T 3aty_A 331 DAVAFG 336 (379)
T ss_dssp SEEEES
T ss_pred eEEEec
Confidence 888775
No 400
>1b22_A DNA repair protein RAD51; DNA binding, riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; HET: DNA; NMR {Homo sapiens} SCOP: a.60.4.1
Probab=23.41 E-value=1.2e+02 Score=24.55 Aligned_cols=55 Identities=16% Similarity=0.200 Sum_probs=37.8
Q ss_pred ChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceE
Q 017179 221 NNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLT 277 (376)
Q Consensus 221 ~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~t 277 (376)
.+..++.|+++|...+..-..+.++-+..+. +.+-...-++++.|++..+.|+.+
T Consensus 34 g~~~i~kL~eAG~~Tve~va~a~~~eL~~i~--GIse~ka~kIi~aA~kl~~~gF~t 88 (114)
T 1b22_A 34 NANDVKKLEEAGFHTVEAVAYAPKKELINIK--GISEAKADKILAEAAKLVPMGFTT 88 (114)
T ss_dssp SHHHHHHHHTTCCSSGGGBTSSBHHHHHTTT--TCSTTHHHHHHHHHHHHSCCC---
T ss_pred CHHHHHHHHHcCcCcHHHHHhCCHHHHHHcc--CCCHHHHHHHHHHHHHHcccCCCc
Confidence 4677999999998887765555553344444 667777788888888877666433
No 401
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=23.41 E-value=2.6e+02 Score=21.65 Aligned_cols=39 Identities=8% Similarity=0.131 Sum_probs=27.8
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++.|++..|.+.|-+++... +.+......++|++.|
T Consensus 67 ~~~~~~l~~~~~~~~ii~ls~~~--~~~~~~~~~~~g~~~~ 105 (153)
T 3cz5_A 67 IEATRHIRQWDGAARILIFTMHQ--GSAFALKAFEAGASGY 105 (153)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCC--SHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhCCCCeEEEEECCC--CHHHHHHHHHCCCcEE
Confidence 46788888877777776666544 5666777778887754
No 402
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=23.37 E-value=4.4e+02 Score=24.27 Aligned_cols=166 Identities=13% Similarity=0.117 Sum_probs=96.9
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCC------hHHHHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN------NGCVREVAK 230 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~------~e~l~~L~~ 230 (376)
.+.++|.+.++++.+.|+.-|++... +....+...+ ..++.|...++.-.|. ....+...+
T Consensus 56 ~t~~~I~~lc~eA~~~~~aaVCV~p~------------~V~~a~~~L~-gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~ 122 (260)
T 3r12_A 56 ATPDDIKKLCLEARENRFHGVCVNPC------------YVKLAREELE-GTDVKVVTVVGFPLGANETRTKAHEAIFAVE 122 (260)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECGG------------GHHHHHHHHT-TSCCEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCcEEEECHH------------HHHHHHHHhc-CCCCeEEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 56889999999999999999997421 2333332222 2347777666433332 112344445
Q ss_pred cCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecC-CCHHHHHHHHHHHHHcCCcEEEe
Q 017179 231 SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCG-ETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 231 aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlG-ET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
.|+|-+..-+ + +..+. ..+|+..++-|+.+++..+ |..+| +|+=-| -|++++....+...+.|.|+|--
T Consensus 123 ~GAdEIDmVi---N--ig~lk--~g~~~~v~~eI~~v~~a~~-~~~lK--VIlEt~~Lt~eei~~A~~ia~eaGADfVKT 192 (260)
T 3r12_A 123 SGADEIDMVI---N--VGMLK--AKEWEYVYEDIRSVVESVK-GKVVK--VIIETCYLDTEEKIAACVISKLAGAHFVKT 192 (260)
T ss_dssp HTCSEEEEEC---C--HHHHH--TTCHHHHHHHHHHHHHHTT-TSEEE--EECCGGGCCHHHHHHHHHHHHHTTCSEEEC
T ss_pred cCCCEEEEEe---e--hhhhc--cccHHHHHHHHHHHHHhcC-CCcEE--EEEeCCCCCHHHHHHHHHHHHHhCcCEEEc
Confidence 6766543311 1 11232 3468888888888887754 45443 444332 28899999999999999999987
Q ss_pred ecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhccchhHhhh
Q 017179 310 GQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASGPMVRSS 355 (376)
Q Consensus 310 ~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sgp~vrss 355 (376)
..-+.| .-.+++..+.+++... -.....+|| =+|+.
T Consensus 193 STGf~~--------~GAT~edV~lm~~~vg-~~v~VKaAG-GIrt~ 228 (260)
T 3r12_A 193 STGFGT--------GGATAEDVHLMKWIVG-DEMGVKASG-GIRTF 228 (260)
T ss_dssp CCSSSS--------CCCCHHHHHHHHHHHC-TTSEEEEES-SCCSH
T ss_pred CCCCCC--------CCCCHHHHHHHHHHhC-CCceEEEeC-CCCCH
Confidence 532322 1124556666665431 112334666 35643
No 403
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=23.30 E-value=4.7e+02 Score=24.59 Aligned_cols=136 Identities=17% Similarity=0.177 Sum_probs=0.0
Q ss_pred HHHHHHCCCcEEEEEeee-------CCCCCcccHHHHHHHHHHHHhhCC-CcEEEEecCCCCCC----hHHHHHHHHcCc
Q 017179 166 AEAIASWGLDYVVITSVD-------RDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGN----NGCVREVAKSGL 233 (376)
Q Consensus 166 a~al~~~G~~eIvLTsg~-------r~dl~d~g~~~~~elvr~Ik~~~p-~i~Ie~l~pd~~g~----~e~l~~L~~aGl 233 (376)
|+.+.+.|++-|.+||-- .+|..-...+.++..++.|....+ ++.|-+=.|.-.|+ .+.++.+.++|+
T Consensus 38 A~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGa 117 (307)
T 3lye_A 38 ARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYGGPIMVARTVEHYIRSGV 117 (307)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCCCHHHHHHHHHHHHHcCC
Q ss_pred ccccccccchH-HHHHhhcCCCC-----CHHHHHHHHHHHHHh----CCCCceE--EEeEEEecCCCHHHHHHHHHHHHH
Q 017179 234 NVFAHNIETVE-ELQSAVRDHRA-----NFKQSLDVLMMAKDY----VPAGTLT--KTSIMLGCGETPDQVVSTMEKVRA 301 (376)
Q Consensus 234 d~i~h~lEtv~-~l~~~vr~r~~-----t~e~~L~vl~~ak~~----~p~Gi~t--kt~imvGlGET~ee~~e~L~~Lre 301 (376)
..+.+ + .+.++.|+... +.++..+.|+.+++. .++ +.+ .|+-..+.| .+|.++-.+...+
T Consensus 118 agv~i-----EDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d-~~I~ARTDa~~~~g--ldeAi~Ra~ay~e 189 (307)
T 3lye_A 118 AGAHL-----EDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSD-FVLIARTDALQSLG--YEECIERLRAARD 189 (307)
T ss_dssp CEEEE-----CCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCC-CEEEEEECCHHHHC--HHHHHHHHHHHHH
T ss_pred eEEEE-----cCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCC-eEEEEechhhhccC--HHHHHHHHHHHHH
Q ss_pred cCCcEEEe
Q 017179 302 AGVDVMTF 309 (376)
Q Consensus 302 l~vd~v~~ 309 (376)
.|.|.+-+
T Consensus 190 AGAD~ifi 197 (307)
T 3lye_A 190 EGADVGLL 197 (307)
T ss_dssp TTCSEEEE
T ss_pred CCCCEEEe
No 404
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=23.27 E-value=3.8e+02 Score=23.47 Aligned_cols=20 Identities=10% Similarity=0.091 Sum_probs=13.1
Q ss_pred HHHHHHHHHHCCCcEEEEEe
Q 017179 162 PTNVAEAIASWGLDYVVITS 181 (376)
Q Consensus 162 i~~~a~al~~~G~~eIvLTs 181 (376)
+.+.++.+++.|++.|-|.+
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~ 36 (286)
T 3dx5_A 17 FTDIVQFAYENGFEGIELWG 36 (286)
T ss_dssp HHHHHHHHHHTTCCEEEEEH
T ss_pred HHHHHHHHHHhCCCEEEEcc
Confidence 34455566678888887754
No 405
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=23.17 E-value=1.5e+02 Score=22.64 Aligned_cols=40 Identities=10% Similarity=0.056 Sum_probs=29.3
Q ss_pred HHHHHHHHHh--hCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 195 FAQTVRKLKE--LKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 195 ~~elvr~Ik~--~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
-.++++.|++ ..|.+.|-++++.. +.+.+....++|++.|
T Consensus 66 g~~~~~~l~~~~~~~~~~ii~ls~~~--~~~~~~~~~~~g~~~~ 107 (140)
T 3lua_A 66 GLEVLSAIRNNSRTANTPVIIATKSD--NPGYRHAALKFKVSDY 107 (140)
T ss_dssp HHHHHHHHHHSGGGTTCCEEEEESCC--CHHHHHHHHHSCCSEE
T ss_pred HHHHHHHHHhCcccCCCCEEEEeCCC--CHHHHHHHHHcCCCEE
Confidence 4578888887 66778777777654 5677777888887755
No 406
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=23.08 E-value=4.8e+02 Score=24.65 Aligned_cols=139 Identities=12% Similarity=0.122 Sum_probs=75.1
Q ss_pred CCCchhHHHHH-------HHHHHCCCcEEEEEeee--------------CCCCCccc-----HHHHHHHHHHHHhhCCC-
Q 017179 156 PPDPDEPTNVA-------EAIASWGLDYVVITSVD--------------RDDLADQG-----SGHFAQTVRKLKELKPN- 208 (376)
Q Consensus 156 ~l~~eEi~~~a-------~al~~~G~~eIvLTsg~--------------r~dl~d~g-----~~~~~elvr~Ik~~~p~- 208 (376)
.|+.+||.+++ +.+.+.|++-|-|-+.+ |.|-. || .....++|++|++..+.
T Consensus 141 ~mt~~eI~~ii~~F~~AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeY-GGS~eNR~Rf~~Eii~avr~~vg~~ 219 (358)
T 4a3u_A 141 ALRLDEIPRLLDDYEKAARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEY-GGAVENRIRLLKDVTERVIATIGKE 219 (358)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTT-SSSHHHHTHHHHHHHHHHHHHHCGG
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCC-CCCHHHHHHHHHHHHHHHHHHcCcc
Confidence 48888887654 34568899999998873 33322 33 24578899999876543
Q ss_pred -cEEEEecCCCC-C-----Ch----HHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceE
Q 017179 209 -MLIEALVPDFR-G-----NN----GCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLT 277 (376)
Q Consensus 209 -i~Ie~l~pd~~-g-----~~----e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~t 277 (376)
+.|++..-++. + .. ..++.+.+.|++.+...--..+..+.... ... ..+.+|+..
T Consensus 220 ~v~vRls~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~------~a~~ik~~~------ 285 (358)
T 4a3u_A 220 RTAVRLSPNGEIQGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGTFGKTD--QPK------LSPEIRKVF------ 285 (358)
T ss_dssp GEEEEECCSSCBTTBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTCSSSBCS--SCC------CHHHHHHHC------
T ss_pred ceEEEeccCcccCCCcccchHHHHHHHHHhhhccCccccccccccccCcccccc--cHH------HHHHHHHhc------
Confidence 34443332221 1 11 23455667777655432112221111110 111 223344432
Q ss_pred EEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecC
Q 017179 278 KTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (376)
Q Consensus 278 kt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY 312 (376)
+.-+|+|-+-|.+...+. |.+-.+|+|.++..
T Consensus 286 ~~~v~~~g~~~~~~ae~~---l~~G~aD~V~~gR~ 317 (358)
T 4a3u_A 286 KPPLVLNQDYTFETAQAA---LDSGVADAISFGRP 317 (358)
T ss_dssp CSCEEEESSCCHHHHHHH---HHHTSCSEEEESHH
T ss_pred CCcEEEeCCCCHHHHHHH---HHcCCceEeHhhHH
Confidence 223566777777665543 45566899999844
No 407
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=23.04 E-value=4.1e+02 Score=23.85 Aligned_cols=72 Identities=13% Similarity=0.020 Sum_probs=47.7
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
++++++...|.+..-+|++.|-+-+ .... .+ .++|++|++...++.+.+ +.-..++|.++.+. +|+|.+
T Consensus 137 ~~~e~~~~~a~~a~~~g~~~VYld~-sG~~-~~------~~~i~~i~~~~~~~Pv~v--GGGI~t~e~a~~~~-~gAD~V 205 (228)
T 3vzx_A 137 LNMDDIVAYARVSELLQLPIFYLEY-SGVL-GD------IEAVKKTKAVLETSTLFY--GGGIKDAETAKQYA-EHADVI 205 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEC-TTSC-CC------HHHHHHHHHHCSSSEEEE--ESSCCSHHHHHHHH-TTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecC-CCCc-CC------HHHHHHHHHhcCCCCEEE--eCCCCCHHHHHHHH-hCCCEE
Confidence 4688888888888878888887766 3211 11 567888887653344432 22122788899887 699977
Q ss_pred ccc
Q 017179 237 AHN 239 (376)
Q Consensus 237 ~h~ 239 (376)
-.+
T Consensus 206 VVG 208 (228)
T 3vzx_A 206 VVG 208 (228)
T ss_dssp EEC
T ss_pred EEC
Confidence 554
No 408
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=23.04 E-value=4.5e+02 Score=25.50 Aligned_cols=48 Identities=15% Similarity=0.176 Sum_probs=35.2
Q ss_pred Cc-hhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhC-CCcEEE
Q 017179 158 DP-DEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIE 212 (376)
Q Consensus 158 ~~-eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~-p~i~Ie 212 (376)
++ ++..+.++.+.+.|++.+-|=.+. + .+.-.+.|++|++.. |++.|.
T Consensus 184 ~~~e~~~~~a~~~~~~Gf~~vKik~g~-----~--~~~d~e~v~avR~avG~d~~l~ 233 (428)
T 3bjs_A 184 QPKESLAEEAQEYIARGYKALKLRIGD-----A--ARVDIERVRHVRKVLGDEVDIL 233 (428)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCS-----C--HHHHHHHHHHHHHHHCTTSEEE
T ss_pred ChHHHHHHHHHHHHHCCCCEEEECCCC-----C--HHHHHHHHHHHHHhcCCCCEEE
Confidence 46 888888888889999999885543 1 344578889998865 566654
No 409
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=23.01 E-value=6.9e+02 Score=26.42 Aligned_cols=119 Identities=13% Similarity=0.205 Sum_probs=61.2
Q ss_pred HHHHHHHHCCCcEEEEEeeeCCCCCc----c--cH----HHHHHHHHHHHhhCC-C--cEEEEecCCCCCChHHHHHHHH
Q 017179 164 NVAEAIASWGLDYVVITSVDRDDLAD----Q--GS----GHFAQTVRKLKELKP-N--MLIEALVPDFRGNNGCVREVAK 230 (376)
Q Consensus 164 ~~a~al~~~G~~eIvLTsg~r~dl~d----~--g~----~~~~elvr~Ik~~~p-~--i~Ie~l~pd~~g~~e~l~~L~~ 230 (376)
+.++++.+.|++.|.| |-+.+.. . +. +...+.++.+-+..| + +.+++.-++| .+.+..|.+
T Consensus 589 ~ev~~L~~aG~~~IQi---DEP~l~~~l~~~~~~~~~~~~~av~~~~~~~~~v~~~~~i~~HiC~G~~---~~i~~~l~~ 662 (765)
T 1u1j_A 589 DEVEDLEKGGIGVIQI---DEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDSTQIHTHMCYSHF---NDIIHSIID 662 (765)
T ss_dssp HHHHHHHHTTCCEEEE---ECTTSSTTCCSSGGGHHHHHHHHHHHHHHHHTTSCSSSEEEEECSCSCC---TTTHHHHHT
T ss_pred HHHHHHHHcCCCEEEE---CCCcccccccccCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEeccCCc---HHHHHHHHh
Confidence 3466777899996544 3333321 1 11 233444444443333 3 4555666776 245778888
Q ss_pred cCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHH-------hCCCCc-eEEEeEEEecCCCHHHHHHHHHHHHHc
Q 017179 231 SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD-------YVPAGT-LTKTSIMLGCGETPDQVVSTMEKVRAA 302 (376)
Q Consensus 231 aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~-------~~p~Gi-~tkt~imvGlGET~ee~~e~L~~Lrel 302 (376)
.++|++.+ |+.. .+ ++.|+.+.+ +.+ |+ .+++. .-|+.|++.+.++...+.
T Consensus 663 ~~~D~isl--E~~r----------s~----~e~L~~~~~~~~~~~~v~l-Gvvd~~s~----~ve~~eev~~ri~~a~~~ 721 (765)
T 1u1j_A 663 MDADVITI--ENSR----------SD----EKLLSVFREGVKYGAGIGP-GVYDIHSP----RIPSSEEIADRVNKMLAV 721 (765)
T ss_dssp TCCSEEEC--CBSS----------SC----TTGGGGGTTTTCCCSEECC-BSSCTTSS----SCCTHHHHHHHHHHHHHS
T ss_pred CCCCEEEE--eCCC----------CC----HHHHHHHHhhccCCCeEEE-eecCCccC----CCCCHHHHHHHHHHHHHh
Confidence 89888754 4221 01 122222111 111 22 11111 248999999999887765
Q ss_pred -CCcEEEe
Q 017179 303 -GVDVMTF 309 (376)
Q Consensus 303 -~vd~v~~ 309 (376)
+.+.+-+
T Consensus 722 v~~e~l~l 729 (765)
T 1u1j_A 722 LEQNILWV 729 (765)
T ss_dssp SCSTTBCB
T ss_pred cCcccEEE
Confidence 6554444
No 410
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=22.87 E-value=1.4e+02 Score=29.61 Aligned_cols=153 Identities=14% Similarity=0.209 Sum_probs=85.9
Q ss_pred CCCchhHHHHHHH-HHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCC-CCCChHHHHHHHHcC-
Q 017179 156 PPDPDEPTNVAEA-IASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPD-FRGNNGCVREVAKSG- 232 (376)
Q Consensus 156 ~l~~eEi~~~a~a-l~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd-~~g~~e~l~~L~~aG- 232 (376)
.++++|..+.+++ +.+.++- ..+-| ++....+.+..+-+.+.. | +.| .--+ +..+...++.+.+.+
T Consensus 262 ~~t~~eai~~~~~ll~~y~i~-----~IEdP-l~~dD~eg~~~L~~~~~~--p-I~i--vGDel~vt~~~~~~~~i~~~a 330 (428)
T 3tqp_A 262 QLTSEEMIDRLTEWTKKYPVI-----SIEDG-LSENDWAGWKLLTERLEN--K-VQL--VGDDIFVTNPDILEKGIKKNI 330 (428)
T ss_dssp CBCHHHHHHHHHHHHHHSCEE-----EEECC-SCTTCHHHHHHHHHHHTT--T-SEE--EESTTTTTCHHHHHHHHHTTC
T ss_pred ccCHHHHHHHHHHHHhhcccc-----eEeCC-CCcccHHHHHHHHHhcCC--C-cce--eccccccCCHHHHHHHHHhCC
Confidence 5789999999987 7777633 33332 221113344444433311 2 322 2222 223566777776655
Q ss_pred cccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--CCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 233 LNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--GETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 233 ld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl--GET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
+|.++. ++. +-.+..+.+++.+.|+. .|+. +|+|+ |||+..++..|. -.++...+..|
T Consensus 331 ~d~i~i----------Kv~-~iGGiTealkia~lA~~---~G~~----~~v~H~sGEted~~iadLa--Va~~~~~ik~G 390 (428)
T 3tqp_A 331 ANAILV----------KLN-QIGTLTETLATVGLAKS---NKYG----VIISHRSGETEDTTIADLA--VATDARQIKTG 390 (428)
T ss_dssp CSEEEE----------CHH-HHCCHHHHHHHHHHHHH---TTCE----EEEECCSBCCSCCHHHHHH--HHTTCEEEECC
T ss_pred CCEEEe----------ccc-ccCCHHHHHHHHHHHHH---cCCe----EEEeCCCCCchHHHHHHHH--HHcCCCcccCC
Confidence 344433 222 23568999999999999 4653 46777 999988876553 33444445443
Q ss_pred cCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhccc
Q 017179 311 QYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASG 349 (376)
Q Consensus 311 qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sg 349 (376)
-|. -.+ .-.++++|..+..++|-.....|
T Consensus 391 ---~p~-----r~e--r~akyn~llriee~l~~~~~~~~ 419 (428)
T 3tqp_A 391 ---SLC-----RSD--RVAKYNRLLQIERELNDQAPYAG 419 (428)
T ss_dssp ---CSS-----SHH--HHHHHHHHHHHHHHHTTSSCBCG
T ss_pred ---CCc-----chh--HHHHHhHHHHHHHHhCcccEecC
Confidence 121 011 12357777788888885544444
No 411
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=22.81 E-value=2.9e+02 Score=22.47 Aligned_cols=54 Identities=19% Similarity=0.241 Sum_probs=34.4
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHHHhhc
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVR 251 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr 251 (376)
.++++.|++..|.+.|-++++.- +.+......++|++.|=.---..+++...++
T Consensus 67 ~~~~~~l~~~~~~~~ii~lt~~~--~~~~~~~a~~~Ga~~~l~KP~~~~~L~~~i~ 120 (184)
T 3rqi_A 67 LSLIAPLCDLQPDARILVLTGYA--SIATAVQAVKDGADNYLAKPANVESILAALQ 120 (184)
T ss_dssp HHHHHHHHHHCTTCEEEEEESSC--CHHHHHHHHHHTCSEEEESSCCHHHHHHHTS
T ss_pred HHHHHHHHhcCCCCCEEEEeCCC--CHHHHHHHHHhCHHHheeCCCCHHHHHHHHH
Confidence 46778888878888887777654 5677777788887655221112235555554
No 412
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=22.73 E-value=1.7e+02 Score=28.34 Aligned_cols=76 Identities=17% Similarity=0.161 Sum_probs=46.1
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhC-CCcEEEE-ecCCCCC-ChHHHHHHHHcCc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEA-LVPDFRG-NNGCVREVAKSGL 233 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~-p~i~Ie~-l~pd~~g-~~e~l~~L~~aGl 233 (376)
-+++.+.+.++++.+. ++.|.|-=-..-.. ...+.++|+.|++.. |++.|++ ..-|+.- ....+. -.++|+
T Consensus 142 ~~~~~~~~~~~~~~~~-a~~i~l~DT~G~~~----P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~la-Av~aGa 215 (382)
T 2ztj_A 142 SEEQDLLAVYEAVAPY-VDRVGLADTVGVAT----PRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYE-AIEAGA 215 (382)
T ss_dssp SCHHHHHHHHHHHGGG-CSEEEEEETTSCCC----HHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHH-HHHTTC
T ss_pred CCHHHHHHHHHHHHHh-cCEEEecCCCCCCC----HHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHH-HHHhCC
Confidence 4678888899998888 88887731111111 346788888888763 5666664 3333311 123333 346888
Q ss_pred ccccc
Q 017179 234 NVFAH 238 (376)
Q Consensus 234 d~i~h 238 (376)
+.+..
T Consensus 216 ~~vd~ 220 (382)
T 2ztj_A 216 THVDT 220 (382)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 87654
No 413
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=22.71 E-value=4.5e+02 Score=25.45 Aligned_cols=132 Identities=14% Similarity=0.038 Sum_probs=70.3
Q ss_pred CchhHHHHHHHHHHC-CCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHc-C-cc
Q 017179 158 DPDEPTNVAEAIASW-GLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS-G-LN 234 (376)
Q Consensus 158 ~~eEi~~~a~al~~~-G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a-G-ld 234 (376)
++++.++.++++.+. |-+.-+ .+|-..-.+ .+...++++.+.+ ++-..||--.+.. +.+.++.|++. + +-
T Consensus 211 ~~~~d~e~v~avR~avG~d~~l--~vDan~~~~--~~eai~~~~~L~~-~~i~~iEqP~~~~--d~~~~~~l~~~~~~iP 283 (428)
T 3bjs_A 211 AARVDIERVRHVRKVLGDEVDI--LTDANTAYT--MADARRVLPVLAE-IQAGWLEEPFACN--DFASYREVAKITPLVP 283 (428)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEE--EEECTTCCC--HHHHHHHHHHHHH-TTCSCEECCSCTT--CHHHHHHHTTTCSSSC
T ss_pred CHHHHHHHHHHHHHhcCCCCEE--EEECCCCCC--HHHHHHHHHHHHh-cCCCEEECCCCcc--CHHHHHHHHHhCCCCc
Confidence 456566666666553 543222 123211111 3445566666654 3334566433322 56777777654 2 22
Q ss_pred ccccc-ccchHHHHHhh----------cC-CCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHc
Q 017179 235 VFAHN-IETVEELQSAV----------RD-HRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAA 302 (376)
Q Consensus 235 ~i~h~-lEtv~~l~~~v----------r~-r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel 302 (376)
++... +-+...+.+.+ ++ +-....+.+++.+.|++ .|+. +|+|.+||.--+...+.....+
T Consensus 284 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGitea~~ia~~A~~---~gi~----~~~~~~es~i~~~a~~hlaaa~ 356 (428)
T 3bjs_A 284 IAAGENHYTRFEFGQMLDAGAVQVWQPDLSKCGGITEGIRIAAMASA---YRIP----INAHSSATGLNHAATIHFLAAT 356 (428)
T ss_dssp EEECTTCCSHHHHHHHHTTCCEEEECCBTTTSSCHHHHHHHHHHHHH---TTCC----BCCBCCSSHHHHHHHHHHHHHC
T ss_pred EEcCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHH---cCCe----EEecCCCcHHHHHHHHHHHHhC
Confidence 22111 11222222221 11 23578999999999999 4665 4555679988888777776666
Q ss_pred C
Q 017179 303 G 303 (376)
Q Consensus 303 ~ 303 (376)
+
T Consensus 357 ~ 357 (428)
T 3bjs_A 357 E 357 (428)
T ss_dssp T
T ss_pred C
Confidence 5
No 414
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=22.63 E-value=1.7e+02 Score=28.39 Aligned_cols=136 Identities=12% Similarity=0.094 Sum_probs=75.3
Q ss_pred CCCCchhHH-HH-------HHHHH-HCCCcEEEEEeee--------------C-CCCCccc------HHHHHHHHHHHHh
Q 017179 155 PPPDPDEPT-NV-------AEAIA-SWGLDYVVITSVD--------------R-DDLADQG------SGHFAQTVRKLKE 204 (376)
Q Consensus 155 ~~l~~eEi~-~~-------a~al~-~~G~~eIvLTsg~--------------r-~dl~d~g------~~~~~elvr~Ik~ 204 (376)
..|+.+||. ++ |+.+. +.|++-|-|-+++ | .|-. || ...+.++|++|++
T Consensus 161 r~lt~~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~y-GG~slenR~r~~~eiv~aVr~ 239 (379)
T 3aty_A 161 EELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPY-AGTTIDTRCQLIYDVTKSVCD 239 (379)
T ss_dssp EECCHHHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTT-CTTSHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCC-CccChhhhHHHHHHHHHHHHH
Confidence 348888888 43 44456 7899999998874 2 2211 33 2457889999987
Q ss_pred hCC-C-cEEEEecCCC-----CCC-----hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCC
Q 017179 205 LKP-N-MLIEALVPDF-----RGN-----NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVP 272 (376)
Q Consensus 205 ~~p-~-i~Ie~l~pd~-----~g~-----~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p 272 (376)
..+ + +.|++..-++ .+. .+.++.|.++|+|.+....-+.+. .... .+ ++.+++...
T Consensus 240 avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~-------~~~~----~~-~~~ir~~~~ 307 (379)
T 3aty_A 240 AVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVN-------QQIG----DV-VAWVRGSYS 307 (379)
T ss_dssp HHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTS-------CCCC----CH-HHHHHTTCC
T ss_pred hcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCC-------CCcc----HH-HHHHHHHCC
Confidence 653 2 4555433222 111 345677778888876543211110 1111 14 566666431
Q ss_pred CCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecC
Q 017179 273 AGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (376)
Q Consensus 273 ~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY 312 (376)
++ +|.+=|-|.++..+. |++-.+|.|.++..
T Consensus 308 --iP----vi~~G~it~~~a~~~---l~~g~aD~V~igR~ 338 (379)
T 3aty_A 308 --GV----KISNLRYDFEEADQQ---IREGKVDAVAFGAK 338 (379)
T ss_dssp --SC----EEEESSCCHHHHHHH---HHTTSCSEEEESHH
T ss_pred --Cc----EEEECCCCHHHHHHH---HHcCCCeEEEecHH
Confidence 22 232223366655444 44556999999844
No 415
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=22.55 E-value=1e+02 Score=29.88 Aligned_cols=61 Identities=13% Similarity=0.140 Sum_probs=44.6
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEeecCC-CCCCCCCCCcc-------cCChHHHHHHHHHHHHHhhhhhc
Q 017179 287 ETPDQVVSTMEKVRAAGVDVMTFGQYM-RPSKRHMPVSE-------YITPEAFERYRALGMEMGFRYVA 347 (376)
Q Consensus 287 ET~ee~~e~L~~Lrel~vd~v~~~qY~-~P~~~~~~v~~-------~v~pe~~~~l~~~a~~~gf~~~~ 347 (376)
=+...+.+.|+.|+++||+.|-+.+.+ .|+..+..+.. +=+++.|+.|-+.|.+.|.+.+.
T Consensus 20 Gd~~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~Vil 88 (441)
T 1lwj_A 20 GDFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVL 88 (441)
T ss_dssp CCHHHHHHTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCHHHHHHhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 378889999999999999988776443 23222333332 33678999999999999987753
No 416
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=22.38 E-value=2.5e+02 Score=20.98 Aligned_cols=39 Identities=10% Similarity=0.150 Sum_probs=23.7
Q ss_pred HHHHHHHHhhC--CCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 196 AQTVRKLKELK--PNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 196 ~elvr~Ik~~~--p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++.|++.. +.+.|-+++... +.+......++|++.|
T Consensus 71 ~~~~~~l~~~~~~~~~pii~ls~~~--~~~~~~~~~~~g~~~~ 111 (140)
T 1k68_A 71 REVLAEIKSDPTLKRIPVVVLSTSI--NEDDIFHSYDLHVNCY 111 (140)
T ss_dssp HHHHHHHHHSTTGGGSCEEEEESCC--CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCcccccccEEEEecCC--cHHHHHHHHHhchhhe
Confidence 35677776654 556665566544 4566666777776644
No 417
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=22.23 E-value=1e+02 Score=27.15 Aligned_cols=72 Identities=17% Similarity=0.296 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHc-----C-cc
Q 017179 161 EPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS-----G-LN 234 (376)
Q Consensus 161 Ei~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a-----G-ld 234 (376)
...+.++.+.+.|+..|.+|+..++... .|.+ .++++++++.. ++.|-+. +... +.+.+..+.+. | +|
T Consensus 145 ~~~e~~~~~~~~G~~~i~~t~~~~~g~~-~g~~--~~~i~~l~~~~-~iPvia~-GGI~-~~~d~~~~~~~~~~~~G~ad 218 (241)
T 1qo2_A 145 DPVSLLKRLKEYGLEEIVHTEIEKDGTL-QEHD--FSLTKKIAIEA-EVKVLAA-GGIS-SENSLKTAQKVHTETNGLLK 218 (241)
T ss_dssp CHHHHHHHHHTTTCCEEEEEETTHHHHT-CCCC--HHHHHHHHHHH-TCEEEEE-SSCC-SHHHHHHHHHHHHHTTTSEE
T ss_pred CHHHHHHHHHhCCCCEEEEEeecccccC-CcCC--HHHHHHHHHhc-CCcEEEE-CCCC-CHHHHHHHHhcccccCCeEe
Confidence 3455566777899999999986432111 1111 35566666543 2444332 2321 57888888887 8 88
Q ss_pred cccc
Q 017179 235 VFAH 238 (376)
Q Consensus 235 ~i~h 238 (376)
.+-.
T Consensus 219 gv~v 222 (241)
T 1qo2_A 219 GVIV 222 (241)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6644
No 418
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=22.22 E-value=3.7e+02 Score=24.60 Aligned_cols=121 Identities=17% Similarity=0.199 Sum_probs=0.0
Q ss_pred HHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccccc
Q 017179 162 PTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIE 241 (376)
Q Consensus 162 i~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lE 241 (376)
..+.++.+.+.|++-+++ +|++ .+...++++.+++..-. .|.++.|.. +.+.++.+.+.+...+ +.+
T Consensus 108 ~~~f~~~~~~aG~dGviv-----~Dl~---~ee~~~~~~~~~~~gl~-~i~liap~s--~~eri~~ia~~~~gfi-y~v- 174 (271)
T 1ujp_A 108 PERFFGLFKQAGATGVIL-----PDLP---PDEDPGLVRLAQEIGLE-TVFLLAPTS--TDARIATVVRHATGFV-YAV- 174 (271)
T ss_dssp HHHHHHHHHHHTCCEEEC-----TTCC---GGGCHHHHHHHHHHTCE-EECEECTTC--CHHHHHHHHTTCCSCE-EEE-
T ss_pred HHHHHHHHHHcCCCEEEe-----cCCC---HHHHHHHHHHHHHcCCc-eEEEeCCCC--CHHHHHHHHHhCCCCE-EEE-
Q ss_pred chHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCC-HHHHHHHHHHHHHcCCcEEEee
Q 017179 242 TVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGET-PDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 242 tv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET-~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
+...++-. +........+.++.+++ . +..-+++|+|=+ .|++.+. .+.|.+-+|
T Consensus 175 s~~G~TG~---~~~~~~~~~~~v~~vr~---~---~~~Pv~vGfGI~t~e~a~~~------~~ADgVIVG 229 (271)
T 1ujp_A 175 SVTGVTGM---RERLPEEVKDLVRRIKA---R---TALPVAVGFGVSGKATAAQA------AVADGVVVG 229 (271)
T ss_dssp CC---------------CCHHHHHHHHT---T---CCSCEEEESCCCSHHHHHHH------TTSSEEEEC
T ss_pred ecCcccCC---CCCCCccHHHHHHHHHh---h---cCCCEEEEcCCCCHHHHHHh------cCCCEEEEC
No 419
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=22.21 E-value=1.2e+02 Score=31.56 Aligned_cols=76 Identities=13% Similarity=0.177 Sum_probs=53.6
Q ss_pred ChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHH
Q 017179 221 NNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVR 300 (376)
Q Consensus 221 ~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lr 300 (376)
+++.+..|.+.+.+ ...+..+|++. .+++++.+++++..-.-+..|+ ..+ +=+|.||+.+.++...
T Consensus 161 ~~~~~~~l~~~~~~---~~~~~~~r~~h---~~g~s~~d~~~~~~g~~~~~P~-aVV-------~P~s~eeV~~iv~~A~ 226 (658)
T 4bby_A 161 NEDFLHELKKTNIS---YSQEADDRVFR---AHGHCLHEIFLLREGMFERIPD-IVL-------WPTCHDDVVKIVNLAC 226 (658)
T ss_dssp CHHHHHHHHHHTCE---EECCHHHHHHT---SCCSCHHHHHHHHSSCCSCCCS-EEE-------ECCSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhccc---ccCchHHHhhh---cCCCCHHHHHHHhCCcccCCcC-EEE-------eeCCHHHHHHHHHHHH
Confidence 57778888776432 34455556643 3678999988877554444555 223 3479999999999999
Q ss_pred HcCCcEEEee
Q 017179 301 AAGVDVMTFG 310 (376)
Q Consensus 301 el~vd~v~~~ 310 (376)
+.++-+++.|
T Consensus 227 ~~~ipVvprG 236 (658)
T 4bby_A 227 KYNLCIIPIG 236 (658)
T ss_dssp HTTCEEEEES
T ss_pred HCCCeEEEEC
Confidence 9999988874
No 420
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=22.12 E-value=1.7e+02 Score=26.76 Aligned_cols=51 Identities=20% Similarity=0.247 Sum_probs=36.6
Q ss_pred CCCchhHHH----HHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEE
Q 017179 156 PPDPDEPTN----VAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA 213 (376)
Q Consensus 156 ~l~~eEi~~----~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~ 213 (376)
.++++.... +++.+.+.|++.++|..|+.... +...++++...+|++.+-.
T Consensus 89 sl~~~tl~~~l~di~~sl~~~G~rrlvivNgHGGN~-------l~~a~~~l~~~~~~~~v~~ 143 (254)
T 3lub_A 89 HTRYATQQAILEDIVSSLHVQGFRKLLILSGHGGNN-------FKGMIRDLAFEYPDFLIAA 143 (254)
T ss_dssp BCCHHHHHHHHHHHHHHHHHTTCCEEEEEESCTTCC-------CHHHHHHHHHHCTTCEEEE
T ss_pred EeCHHHHHHHHHHHHHHHHHcCCCEEEEEeCCchHH-------HHHHHHHHHHHCCCcEEEE
Confidence 466665544 56678899999999998875432 4567788888877776654
No 421
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=22.08 E-value=2.4e+02 Score=21.05 Aligned_cols=39 Identities=5% Similarity=0.081 Sum_probs=26.2
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++.|++..|.+.|-++++.- +.+......++|++.|
T Consensus 67 ~~~~~~l~~~~~~~~ii~~t~~~--~~~~~~~~~~~g~~~~ 105 (130)
T 3eod_A 67 LKLLEHIRNRGDQTPVLVISATE--NMADIAKALRLGVEDV 105 (130)
T ss_dssp HHHHHHHHHTTCCCCEEEEECCC--CHHHHHHHHHHCCSEE
T ss_pred HHHHHHHHhcCCCCCEEEEEcCC--CHHHHHHHHHcCCCEE
Confidence 46777777777777776666654 5566666777777644
No 422
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=22.07 E-value=1.5e+02 Score=28.67 Aligned_cols=151 Identities=9% Similarity=0.062 Sum_probs=80.0
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeC-C----CCCc-ccHHHHHHHHHHHHhhC-CCcEEEEecCCCCC--ChH----
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDR-D----DLAD-QGSGHFAQTVRKLKELK-PNMLIEALVPDFRG--NNG---- 223 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r-~----dl~d-~g~~~~~elvr~Ik~~~-p~i~Ie~l~pd~~g--~~e---- 223 (376)
.+++++.+.++.+.+.|++.+-|--|.. . ..+. ...+.-.+.|++|++.. |++.+.+ |.++ +.+
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~v---Dan~~~~~~~A~~ 226 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLF---GTHGQFTVSGAKR 226 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEE---CCCSCBCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCCeEEE---eCCCCcCHHHHHH
Confidence 4688999999998899999999843211 0 0000 01345677888888876 4555543 2222 222
Q ss_pred HHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcC
Q 017179 224 CVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAG 303 (376)
Q Consensus 224 ~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~ 303 (376)
.++.|.+.|++.+ |- -+. ..+ ++.++.+++.. +++ |-.||+.....+..+.++.-.
T Consensus 227 ~~~~l~~~~i~~i----Ee------P~~--~~~----~~~~~~l~~~~--~iP------Ia~dE~~~~~~~~~~~i~~~a 282 (404)
T 4e5t_A 227 LARRLEAYDPLWF----EE------PIP--PEK----PEDMAEVARYT--SIP------VATGERLCTKYEFSRVLETGA 282 (404)
T ss_dssp HHHHHGGGCCSEE----EC------CSC--TTC----HHHHHHHHHHC--SSC------EEECTTCCHHHHHHHHHHHTC
T ss_pred HHHHHhhcCCcEE----EC------CCC--ccc----HHHHHHHHhhC--CCC------EEeCCCcCCHHHHHHHHHhCC
Confidence 2344444454433 21 011 123 23445555521 122 223566666666666666677
Q ss_pred CcEEEeecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhh
Q 017179 304 VDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRY 345 (376)
Q Consensus 304 vd~v~~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~ 345 (376)
+|++.+- +.+-+ . ..+...+..+|...|...
T Consensus 283 ~d~v~~d----~~~~G----G---it~~~~ia~~A~~~gi~~ 313 (404)
T 4e5t_A 283 ASILQMN----LGRVG----G---LLEAKKIAAMAECHSAQI 313 (404)
T ss_dssp CSEECCC----TTTSS----C---HHHHHHHHHHHHHTTCEE
T ss_pred CCEEecC----ccccC----C---HHHHHHHHHHHHHcCCEE
Confidence 7777552 21111 1 335566666777766654
No 423
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=22.04 E-value=2.9e+02 Score=27.51 Aligned_cols=121 Identities=14% Similarity=0.184 Sum_probs=53.2
Q ss_pred HHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhh------CCCcEEEEecCCCCCChHHHHHHHHcCccccccc
Q 017179 166 AEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKEL------KPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN 239 (376)
Q Consensus 166 a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~------~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~ 239 (376)
.+.+.+.++..+.++--+. .+ .|.-...++++.+... ...+.+.+-.+......+.++.+.++|+|.+..+
T Consensus 172 ~~~m~~~~i~~lpVVDe~g-~l--vGiIT~~Dil~~~~~p~a~kd~~grl~v~aavG~~~~~~~~a~~l~~aG~d~I~id 248 (490)
T 4avf_A 172 KAKLYENRIEKMLVVDENF-YL--RGLVTFRDIEKAKTYPLASKDEQGRLRVGAAVGTGADTGERVAALVAAGVDVVVVD 248 (490)
T ss_dssp --------------------------------------CTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHcCCCEEEEEcCCC-cE--EEEEehHHhhhhccCcchhhhccCcceeeeeeccccchHHHHHHHhhcccceEEec
Confidence 3445566776666652111 11 1333344555544221 1123444433332224678899999999987654
Q ss_pred ccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 240 IETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 240 lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
.- .......++.++.+++.+|. ++ +++|-.-|.++ .+.+.+.|+|.|.++
T Consensus 249 ~a------------~g~~~~~~~~v~~i~~~~p~-~~----Vi~g~v~t~e~----a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 249 TA------------HGHSKGVIERVRWVKQTFPD-VQ----VIGGNIATAEA----AKALAEAGADAVKVG 298 (490)
T ss_dssp CS------------CCSBHHHHHHHHHHHHHCTT-SE----EEEEEECSHHH----HHHHHHTTCSEEEEC
T ss_pred cc------------CCcchhHHHHHHHHHHHCCC-ce----EEEeeeCcHHH----HHHHHHcCCCEEEEC
Confidence 11 11235678889999987754 43 33454456655 466788999999985
No 424
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=22.00 E-value=3.6e+02 Score=23.96 Aligned_cols=106 Identities=18% Similarity=0.253 Sum_probs=59.4
Q ss_pred HHHHHHHHCCC-cEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCc--ccccccc
Q 017179 164 NVAEAIASWGL-DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGL--NVFAHNI 240 (376)
Q Consensus 164 ~~a~al~~~G~-~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGl--d~i~h~l 240 (376)
.+++.+.+.|. +.++++|-+ .+.++.+++..|.+.+..+.... .+....+...|+ +.+..+.
T Consensus 157 ~v~~~l~~~~~~~~v~i~Sf~------------~~~l~~~~~~~p~~~~~~l~~~~---~~~~~~~~~~~~~~~~i~~~~ 221 (272)
T 3ch0_A 157 LVVAEIKKAHITDRFTLQSFD------------VRALEYMHSQYPDIKLSYLVETK---GTLKKQLEKLSFTPAVYSPDV 221 (272)
T ss_dssp HHHHHHHHTTCGGGEEEEESC------------HHHHHHHHHHCTTSEEEEEECSS---CCHHHHHTTSSSCCSEEEEBG
T ss_pred HHHHHHHHcCCCCcEEEEeCC------------HHHHHHHHHHCCCCcEEEEecCC---CCHHHHHHHcCCCCcEEccch
Confidence 45566667776 667777642 23567777778888777666433 122233444444 4433221
Q ss_pred cchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecC
Q 017179 241 ETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (376)
Q Consensus 241 Etv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY 312 (376)
. .+. -+.++.+++ .|+.+.+.-+ .+.+ .++.+.++|+|.|.- .|
T Consensus 222 ~-------~~~---------~~~v~~~~~---~Gl~v~~wTv----n~~~----~~~~l~~~GvdgIiT-D~ 265 (272)
T 3ch0_A 222 T-------LVS---------KKDIDAAHK---LGMRVIPWTV----NTKE----EIETLISLGVDGIIT-DY 265 (272)
T ss_dssp G-------GCC---------HHHHHHHHH---TTCEECCBCC----CSHH----HHHHHHHHTCSEEEE-SC
T ss_pred h-------hcC---------HHHHHHHHH---cCCEEEEecc----CCHH----HHHHHHHcCCCEEEe-CC
Confidence 1 111 256778888 4776544332 3333 356677899998743 44
No 425
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=21.93 E-value=4.6e+02 Score=23.99 Aligned_cols=107 Identities=17% Similarity=0.253 Sum_probs=60.0
Q ss_pred HHHHHHHHCCC-cEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCC--C-----------------hH
Q 017179 164 NVAEAIASWGL-DYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG--N-----------------NG 223 (376)
Q Consensus 164 ~~a~al~~~G~-~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g--~-----------------~e 223 (376)
.+++.+.+.|+ +.++|+|-+ .+.++.+++..|++.+..+...... . ..
T Consensus 169 ~v~~~l~~~~~~~~v~i~SF~------------~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
T 3l12_A 169 AVLADVRRYRMEPRTVMHSFD------------WALLGECRRQAPDLPTSYLSQLPENADDPGEDSAKPVGPDYDRMTES 236 (313)
T ss_dssp HHHHHHHHTTCGGGEEEEESC------------HHHHHHHHHHCTTSCEEEEECCCC-------------CCCTTTCCSC
T ss_pred HHHHHHHHcCCCCCEEEEcCC------------HHHHHHHHHHCCCCcEEEEeccccccccccccccccccccchhcccc
Confidence 45566777776 678888743 2467778888888877766543210 0 01
Q ss_pred HHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcC
Q 017179 224 CVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAG 303 (376)
Q Consensus 224 ~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~ 303 (376)
....+...|++.+..... .+. -+.++.+|+ .|+.+..--+ .+.+ .++.+.++|
T Consensus 237 l~~~~~~~~~~~~~~~~~-------~~~---------~~~v~~~~~---~Gl~V~~WTV----n~~~----~~~~l~~~G 289 (313)
T 3l12_A 237 LPQAVASAGGQLWCPYFL-------DVT---------PELVAEAHD---LGLIVLTWTV----NEPE----DIRRMATTG 289 (313)
T ss_dssp HHHHHHHHTCSEEEEBGG-------GCC---------HHHHHHHHH---TTCEEEEBCC----CSHH----HHHHHHHHT
T ss_pred HHHHHHHhCCcEEecchh-------cCC---------HHHHHHHHH---CCCEEEEEcC----CCHH----HHHHHHHcC
Confidence 123334444444432211 111 257778888 4776644432 3333 466677889
Q ss_pred CcEEEe
Q 017179 304 VDVMTF 309 (376)
Q Consensus 304 vd~v~~ 309 (376)
||.|.-
T Consensus 290 VDgIiT 295 (313)
T 3l12_A 290 VDGIVT 295 (313)
T ss_dssp CSEEEE
T ss_pred CCEEEe
Confidence 998754
No 426
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=21.93 E-value=4.4e+02 Score=24.59 Aligned_cols=88 Identities=16% Similarity=0.210 Sum_probs=51.4
Q ss_pred HHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCC
Q 017179 195 FAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAG 274 (376)
Q Consensus 195 ~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~G 274 (376)
+.+.+++.++..|...|++.... .+.+++..++|+|++-. + .-+.++.-++++..+. .
T Consensus 185 i~~Av~~ar~~~~~~~IeVEv~t----l~ea~eAl~aGaD~I~L--D------------n~~~~~l~~av~~~~~---~- 242 (287)
T 3tqv_A 185 IAKAVTKAKKLDSNKVVEVEVTN----LDELNQAIAAKADIVML--D------------NFSGEDIDIAVSIARG---K- 242 (287)
T ss_dssp HHHHHHHHHHHCTTSCEEEEESS----HHHHHHHHHTTCSEEEE--E------------SCCHHHHHHHHHHHTT---T-
T ss_pred HHHHHHHHHhhCCCCcEEEEeCC----HHHHHHHHHcCCCEEEE--c------------CCCHHHHHHHHHhhcC---C-
Confidence 55677777777777778876653 46677777899998743 2 1233333333433322 2
Q ss_pred ceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecC
Q 017179 275 TLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (376)
Q Consensus 275 i~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY 312 (376)
+.+-.+. |+ |.+ .+..+.+.|+|++.+|-.
T Consensus 243 v~ieaSG--GI--t~~----~i~~~a~tGVD~IsvGal 272 (287)
T 3tqv_A 243 VALEVSG--NI--DRN----SIVAIAKTGVDFISVGAI 272 (287)
T ss_dssp CEEEEES--SC--CTT----THHHHHTTTCSEEECSHH
T ss_pred ceEEEEC--CC--CHH----HHHHHHHcCCCEEEEChh
Confidence 3222111 22 333 345567799999999754
No 427
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=21.89 E-value=1.1e+02 Score=28.42 Aligned_cols=73 Identities=16% Similarity=0.237 Sum_probs=46.9
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCCCC-Cccc----HHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCc
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRDDL-ADQG----SGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGL 233 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~dl-~d~g----~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGl 233 (376)
.+|+++.|..++ -..|+|.=-.|..+ .++| .+.+.++|+.+++. +++|.+++- - +.+.++.-++.|+
T Consensus 75 t~emi~ial~~k---P~~vtLVPEkreE~TTegGldv~~~~L~~~i~~L~~~--GIrVSLFID-p--d~~qi~aA~~~GA 146 (260)
T 3o6c_A 75 NDEILNLALKLK---PHRVTLVPEKREELTTEGGLCLNHAKLKQSIEKLQNA--NIEVSLFIN-P--SLEDIEKSKILKA 146 (260)
T ss_dssp CHHHHHHHHHHC---CSEEEECCCSGGGBCTTSSBCTTCTTHHHHHHHHHHT--TCEEEEEEC-S--CHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcC---CCEEEECCCCCCccCCCCChhhCHHHHHHHHHHHHHC--CCEEEEEeC-C--CHHHHHHHHHhCC
Confidence 456777766543 36777653322222 1233 45678888888774 688887762 2 5788999999999
Q ss_pred cccccc
Q 017179 234 NVFAHN 239 (376)
Q Consensus 234 d~i~h~ 239 (376)
|++...
T Consensus 147 d~IELh 152 (260)
T 3o6c_A 147 QFIELH 152 (260)
T ss_dssp SEEEEC
T ss_pred CEEEEe
Confidence 987553
No 428
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=21.85 E-value=4.7e+02 Score=24.09 Aligned_cols=129 Identities=12% Similarity=0.127 Sum_probs=75.4
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHH
Q 017179 146 CNVKTSRAPPPPDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCV 225 (376)
Q Consensus 146 C~v~~~r~~~~l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l 225 (376)
|.+|-.+..--.|+-+|. +...+|.+-|+|.... +.+ ..+.++++..++..-++.||+- +.+.+
T Consensus 103 v~lPvLrKDFiid~yQI~----eAr~~GADaILLI~a~---L~~---~~l~~l~~~A~~lGl~~LvEVh------~~~El 166 (258)
T 4a29_A 103 VSIPILMSDFIVKESQID----DAYNLGADTVLLIVKI---LTE---RELESLLEYARSYGMEPLILIN------DENDL 166 (258)
T ss_dssp CSSCEEEESCCCSHHHHH----HHHHHTCSEEEEEGGG---SCH---HHHHHHHHHHHHTTCCCEEEES------SHHHH
T ss_pred cCCCEeeccccccHHHHH----HHHHcCCCeeehHHhh---cCH---HHHHHHHHHHHHHhHHHHHhcc------hHHHH
Confidence 444443322225554433 3456799999987643 222 3456666666655444566642 57788
Q ss_pred HHHHHcCccccccc---ccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCce-E-EEeEEEecCCCHHHHHHHHHHHH
Q 017179 226 REVAKSGLNVFAHN---IETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTL-T-KTSIMLGCGETPDQVVSTMEKVR 300 (376)
Q Consensus 226 ~~L~~aGld~i~h~---lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~-t-kt~imvGlGET~ee~~e~L~~Lr 300 (376)
+...++|++.++.| +.| ++--++.-..+....|.+.. + -+|| .|.+|+ ..++
T Consensus 167 ~rAl~~~a~iIGINNRnL~t--------------f~vdl~~t~~L~~~ip~~~~~VsESGI-----~t~~dv----~~l~ 223 (258)
T 4a29_A 167 DIALRIGARFIGIMSRDFET--------------GEINKENQRKLISMIPSNVVKVAKLGI-----SERNEI----EELR 223 (258)
T ss_dssp HHHHHTTCSEEEECSBCTTT--------------CCBCHHHHHHHHTTSCTTSEEEEEESS-----CCHHHH----HHHH
T ss_pred HHHhcCCCcEEEEeCCCccc--------------cccCHHHHHHHHhhCCCCCEEEEcCCC-----CCHHHH----HHHH
Confidence 88889999999876 222 11112333333344555532 2 3444 577765 4578
Q ss_pred HcCCcEEEeecCC
Q 017179 301 AAGVDVMTFGQYM 313 (376)
Q Consensus 301 el~vd~v~~~qY~ 313 (376)
+.|++-+-+|..+
T Consensus 224 ~~G~~a~LVGeal 236 (258)
T 4a29_A 224 KLGVNAFLISSSL 236 (258)
T ss_dssp HTTCCEEEECHHH
T ss_pred HCCCCEEEECHHH
Confidence 8999999998664
No 429
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=21.79 E-value=2.6e+02 Score=21.12 Aligned_cols=39 Identities=5% Similarity=0.135 Sum_probs=23.9
Q ss_pred HHHHHHHHhhC--CCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 196 AQTVRKLKELK--PNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 196 ~elvr~Ik~~~--p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++.|++.. +.+.|-+++... +.+......++|++.|
T Consensus 78 ~~~~~~l~~~~~~~~~~ii~~t~~~--~~~~~~~~~~~g~~~~ 118 (149)
T 1k66_A 78 REVLQEIKQDEVLKKIPVVIMTTSS--NPKDIEICYSYSISSY 118 (149)
T ss_dssp HHHHHHHTTSTTGGGSCEEEEESCC--CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhCcccCCCeEEEEeCCC--CHHHHHHHHHCCCCEE
Confidence 35677777654 556665566543 4566666677776644
No 430
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=21.76 E-value=1.3e+02 Score=28.49 Aligned_cols=149 Identities=14% Similarity=0.172 Sum_probs=79.1
Q ss_pred CchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhC-CCcEEEEe-cCCCCCChH----HHHHHHH-
Q 017179 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEAL-VPDFRGNNG----CVREVAK- 230 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~-p~i~Ie~l-~pd~~g~~e----~l~~L~~- 230 (376)
++++..+.++.+.+.|++.+-|=.|.. + .+.-.+.|++|++.. |++.+.+= -..+ +.+ .++.|.+
T Consensus 140 ~~~~~~~~a~~~~~~Gf~~iKik~g~~----~--~~~d~~~v~avr~a~g~~~~l~vDan~~~--~~~~a~~~~~~l~~~ 211 (366)
T 1tkk_A 140 SPEEMAADAENYLKQGFQTLKIKVGKD----D--IATDIARIQEIRKRVGSAVKLRLDANQGW--RPKEAVTAIRKMEDA 211 (366)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSS----C--HHHHHHHHHHHHHHHCSSSEEEEECTTCS--CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCC----C--HHHHHHHHHHHHHHhCCCCeEEEECCCCC--CHHHHHHHHHHHhhc
Confidence 578888888888889999998855431 1 345578888888865 56655321 1111 322 3344444
Q ss_pred -cCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 231 -SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 231 -aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
.|++.+ | +- +. ..++ +.++.+++.. ++++. .||+.....+..+.++.-.+|++.+
T Consensus 212 ~~~i~~i----E---qP---~~--~~d~----~~~~~l~~~~--~ipIa------~dE~~~~~~~~~~~i~~~~~d~v~i 267 (366)
T 1tkk_A 212 GLGIELV----E---QP---VH--KDDL----AGLKKVTDAT--DTPIM------ADESVFTPRQAFEVLQTRSADLINI 267 (366)
T ss_dssp TCCEEEE----E---CC---SC--TTCH----HHHHHHHHHC--SSCEE------ECTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCCceEE----E---CC---CC--cccH----HHHHHHHhhC--CCCEE------EcCCCCCHHHHHHHHHhCCCCEEEe
Confidence 443332 2 10 11 2233 3344444421 23322 2455444455555566667888766
Q ss_pred ecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhccc
Q 017179 310 GQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASG 349 (376)
Q Consensus 310 ~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sg 349 (376)
- |.+-+- ..+...+..+|++.|...+.++
T Consensus 268 k----~~~~GG-------it~~~~i~~~A~~~g~~~~~~~ 296 (366)
T 1tkk_A 268 K----LMKAGG-------ISGAEKINAMAEACGVECMVGS 296 (366)
T ss_dssp C----HHHHTS-------HHHHHHHHHHHHHHTCCEEECC
T ss_pred e----hhhhcC-------HHHHHHHHHHHHHcCCcEEecC
Confidence 2 211111 3456667777777777655443
No 431
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=21.67 E-value=3.1e+02 Score=25.49 Aligned_cols=91 Identities=19% Similarity=0.230 Sum_probs=54.8
Q ss_pred HHHHHHHHHhhCCC-cEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCC
Q 017179 195 FAQTVRKLKELKPN-MLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPA 273 (376)
Q Consensus 195 ~~elvr~Ik~~~p~-i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~ 273 (376)
+.+.++..++..|. ..|++... +.+.+.+..++|+|.+-. + .-+.++..++++.++..+|.
T Consensus 179 i~~av~~ar~~~~~~~~I~VEV~----tleea~eA~~aGaD~I~L--D------------n~~~e~l~~av~~l~~~~~~ 240 (285)
T 1o4u_A 179 AERAVQEVRKIIPFTTKIEVEVE----NLEDALRAVEAGADIVML--D------------NLSPEEVKDISRRIKDINPN 240 (285)
T ss_dssp HHHHHHHHHTTSCTTSCEEEEES----SHHHHHHHHHTTCSEEEE--E------------SCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhCCCCceEEEEeC----CHHHHHHHHHcCCCEEEE--C------------CCCHHHHHHHHHHhhccCCC
Confidence 45577888887765 56666543 457778888899998633 1 23456666666666554333
Q ss_pred CceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecC
Q 017179 274 GTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (376)
Q Consensus 274 Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY 312 (376)
+.+-.+ =|+ |.+ .+..+.+.|+|++.++..
T Consensus 241 -v~ieAS--GGI--t~e----ni~~~a~tGVD~IsvGsl 270 (285)
T 1o4u_A 241 -VIVEVS--GGI--TEE----NVSLYDFETVDVISSSRL 270 (285)
T ss_dssp -SEEEEE--ECC--CTT----TGGGGCCTTCCEEEEGGG
T ss_pred -ceEEEE--CCC--CHH----HHHHHHHcCCCEEEEeHH
Confidence 333221 133 322 334456789999999853
No 432
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=21.46 E-value=4.3e+02 Score=23.44 Aligned_cols=165 Identities=14% Similarity=0.137 Sum_probs=95.2
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCC--C----hHHHHHHHH
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG--N----NGCVREVAK 230 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g--~----~e~l~~L~~ 230 (376)
.+.+++.+.++++.+.|+.-|++.-+ +....+...+. .++.|...++.-.| + ....+...+
T Consensus 16 ~t~~~i~~l~~~a~~~~~~aVcv~p~------------~v~~~~~~l~~-~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~ 82 (220)
T 1ub3_A 16 ATLEEVAKAAEEALEYGFYGLCIPPS------------YVAWVRARYPH-APFRLVTVVGFPLGYQEKEVKALEAALACA 82 (220)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCGG------------GHHHHHHHCTT-CSSEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECHH------------HHHHHHHHhCC-CCceEEEEecCCCCCCchHHHHHHHHHHHH
Confidence 56889999999999999999987532 22333222111 24777766532233 1 123455556
Q ss_pred cCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEee
Q 017179 231 SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFG 310 (376)
Q Consensus 231 aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~ 310 (376)
.|+|-+..-+ + +..+. ..+++..++-|..+++..+. ..++.=+-.++ =|++++....+...+.|.|+|--.
T Consensus 83 ~GAdevd~vi---n--ig~~~--~g~~~~v~~ei~~v~~a~~~-~~lkvIlet~~-l~~e~i~~a~~ia~eaGADfVKTs 153 (220)
T 1ub3_A 83 RGADEVDMVL---H--LGRAK--AGDLDYLEAEVRAVREAVPQ-AVLKVILETGY-FSPEEIARLAEAAIRGGADFLKTS 153 (220)
T ss_dssp TTCSEEEEEC---C--HHHHH--TTCHHHHHHHHHHHHHHSTT-SEEEEECCGGG-SCHHHHHHHHHHHHHHTCSEEECC
T ss_pred cCCCEEEecc---c--chhhh--CCCHHHHHHHHHHHHHHHcC-CCceEEEecCC-CCHHHHHHHHHHHHHhCCCEEEeC
Confidence 7777654321 1 11222 24678888888888876543 33443222222 278999999999999999999874
Q ss_pred cCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhccchhHh
Q 017179 311 QYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVASGPMVR 353 (376)
Q Consensus 311 qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~sgp~vr 353 (376)
.-+.|. -.+++.++.+++.. .-.....++| =+|
T Consensus 154 TGf~~~--------gat~~dv~~m~~~v-g~~v~VkaaG-Gir 186 (220)
T 1ub3_A 154 TGFGPR--------GASLEDVALLVRVA-QGRAQVKAAG-GIR 186 (220)
T ss_dssp CSSSSC--------CCCHHHHHHHHHHH-TTSSEEEEES-SCC
T ss_pred CCCCCC--------CCCHHHHHHHHHhh-CCCCeEEEEC-CCC
Confidence 312221 12466667666553 1112334555 344
No 433
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=21.40 E-value=1e+02 Score=31.41 Aligned_cols=62 Identities=16% Similarity=0.306 Sum_probs=45.7
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEeecCC-CCCCCCCCCc-------ccCChHHHHHHHHHHHHHhhhhhc
Q 017179 286 GETPDQVVSTMEKVRAAGVDVMTFGQYM-RPSKRHMPVS-------EYITPEAFERYRALGMEMGFRYVA 347 (376)
Q Consensus 286 GET~ee~~e~L~~Lrel~vd~v~~~qY~-~P~~~~~~v~-------~~v~pe~~~~l~~~a~~~gf~~~~ 347 (376)
|-+...+.+.|..|+++|++.|-|.+.+ .|...+..+. ++=+++.|+.|-+-+.+.|.+.+.
T Consensus 169 ~G~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~Vil 238 (585)
T 1wzl_A 169 GGDLKGVIDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIIL 238 (585)
T ss_dssp CCCHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 5688999999999999999988775443 2333333332 334688999999999999988754
No 434
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=21.39 E-value=3.4e+02 Score=26.78 Aligned_cols=27 Identities=11% Similarity=0.092 Sum_probs=23.9
Q ss_pred cCCCHHHHHHHHHHHHHcCCcEEEeec
Q 017179 285 CGETPDQVVSTMEKVRAAGVDVMTFGQ 311 (376)
Q Consensus 285 lGET~ee~~e~L~~Lrel~vd~v~~~q 311 (376)
.+.+++++.+..+.+.+.++|.|.+.+
T Consensus 278 pd~~~~~i~~iA~~a~~aGaDgIiv~N 304 (415)
T 3i65_A 278 PDLNQEQKKEIADVLLETNIDGMIISN 304 (415)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 367899999999999999999998864
No 435
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=21.39 E-value=2.7e+02 Score=27.49 Aligned_cols=76 Identities=14% Similarity=0.102 Sum_probs=41.9
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEE-ecCCCCC-ChHHHHHHHHcCcc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEA-LVPDFRG-NNGCVREVAKSGLN 234 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~-l~pd~~g-~~e~l~~L~~aGld 234 (376)
-+++.+++.++++.+.|++.|.|-=-..--. ...+.++++.|++.. ++.|++ ..-|+.- ....+. -.++|++
T Consensus 177 ~d~~~~~~v~~~~~~~Ga~~i~l~DTvG~~~----P~~v~~lv~~l~~~~-~~~i~~H~Hnd~GlAvAN~la-Av~aGa~ 250 (423)
T 3ivs_A 177 SDLVDLLSLYKAVDKIGVNRVGIADTVGCAT----PRQVYDLIRTLRGVV-SCDIECHFHNDTGMAIANAYC-ALEAGAT 250 (423)
T ss_dssp SCHHHHHHHHHHHHHHCCSEEEEEETTSCCC----HHHHHHHHHHHHHHC-SSEEEEEEBCTTSCHHHHHHH-HHHTTCC
T ss_pred CCHHHHHHHHHHHHHhCCCccccCCccCcCC----HHHHHHHHHHHHhhc-CCeEEEEECCCCchHHHHHHH-HHHhCCC
Confidence 4667777888888888888776631111111 345777888887764 355553 2223311 122233 3357877
Q ss_pred cccc
Q 017179 235 VFAH 238 (376)
Q Consensus 235 ~i~h 238 (376)
.+..
T Consensus 251 ~vd~ 254 (423)
T 3ivs_A 251 HIDT 254 (423)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6644
No 436
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=21.34 E-value=5e+02 Score=24.14 Aligned_cols=154 Identities=13% Similarity=0.105 Sum_probs=86.8
Q ss_pred CCchhHHHHHHHHHHC--CCcEEEEEeeeCCCCCcccHHHHHHHH-HHHHh-hCC-CcEEEEecCCCCCC------hHHH
Q 017179 157 PDPDEPTNVAEAIASW--GLDYVVITSVDRDDLADQGSGHFAQTV-RKLKE-LKP-NMLIEALVPDFRGN------NGCV 225 (376)
Q Consensus 157 l~~eEi~~~a~al~~~--G~~eIvLTsg~r~dl~d~g~~~~~elv-r~Ik~-~~p-~i~Ie~l~pd~~g~------~e~l 225 (376)
.+.++|.+.++++.+. |+.-|++..+ +.... +.++. -.| .+.|...++...|. ....
T Consensus 45 ~T~~dI~~lc~eA~~~~~~~aaVCV~p~------------~V~~a~~~L~~~gs~~~v~v~tVigFP~G~~~~~~Kv~E~ 112 (281)
T 2a4a_A 45 GTEDDIRELCNESVKTCPFAAAVCVYPK------------FVKFINEKIKQEINPFKPKIACVINFPYGTDSMEKVLNDT 112 (281)
T ss_dssp CCHHHHHHHHHHHHSSSSCCSEEEECGG------------GHHHHHHHHHHHSSSCCSEEEEEESTTTCCSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccCCccEEEECHH------------HHHHHHHHhhccCCCCCceEEEEeCCCCCCCCHHHHHHHH
Confidence 4788999999999999 9999987521 23333 33442 233 57887766433442 1234
Q ss_pred HHHHHcCcccccccccchHHHHHhhcCCCCCHH---HHHHHHHHHHHhCCCCceEEEeEEEecCCCHHH-HHHHHHHHHH
Q 017179 226 REVAKSGLNVFAHNIETVEELQSAVRDHRANFK---QSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQ-VVSTMEKVRA 301 (376)
Q Consensus 226 ~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e---~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee-~~e~L~~Lre 301 (376)
+...+.|+|-+..-+ + +..+. ..+|+ ..++-|+.+++..+. ..+|.=|=.++= +++| +....+...+
T Consensus 113 ~~Av~~GAdEIDmVi---n--ig~lk--sg~~~~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~L-~d~e~i~~A~~ia~e 183 (281)
T 2a4a_A 113 EKALDDGADEIDLVI---N--YKKII--ENTDEGLKEATKLTQSVKKLLTN-KILKVIIEVGEL-KTEDLIIKTTLAVLN 183 (281)
T ss_dssp HHHHHHTCSEEEEEC---C--HHHHH--HSHHHHHHHHHHHHHHHHTTCTT-SEEEEECCHHHH-CSHHHHHHHHHHHHT
T ss_pred HHHHHcCCCEEEEec---c--hHhhh--CCChhHHHHHHHHHHHHHHHhcC-CceEEEEecccC-CcHHHHHHHHHHHHH
Confidence 445566777553321 1 01121 13455 777777777776543 444433222221 4566 6688888889
Q ss_pred cCCcEEEeecCCCCCCCCCCCcccCChHHHHHHHHHHH
Q 017179 302 AGVDVMTFGQYMRPSKRHMPVSEYITPEAFERYRALGM 339 (376)
Q Consensus 302 l~vd~v~~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~ 339 (376)
.|.|+|--..-+.|. -.+++..+.+++..+
T Consensus 184 aGADfVKTSTGf~~~--------gAT~edv~lm~~~v~ 213 (281)
T 2a4a_A 184 GNADFIKTSTGKVQI--------NATPSSVEYIIKAIK 213 (281)
T ss_dssp TTCSEEECCCSCSSC--------CCCHHHHHHHHHHHH
T ss_pred hCCCEEEeCCCCCCC--------CCCHHHHHHHHHHHH
Confidence 999998764322221 124556666665543
No 437
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=21.30 E-value=3.6e+02 Score=23.14 Aligned_cols=58 Identities=10% Similarity=-0.038 Sum_probs=33.4
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHH
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD 269 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~ 269 (376)
.++++.|++..|.+.|-+++..- +.+......++|++-| +. +..+.++.+..|+.+.+
T Consensus 83 ~~~~~~lr~~~~~~~ii~lt~~~--~~~~~~~~~~~Ga~~y-------------l~-Kp~~~~~L~~~i~~~~~ 140 (250)
T 3r0j_A 83 FGVLRRLRADGIDAPALFLTARD--SLQDKIAGLTLGGDDY-------------VT-KPFSLEEVVARLRVILR 140 (250)
T ss_dssp HHHHHHHHHTTCCCCEEEEECST--THHHHHHHHTSTTCEE-------------EE-SSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCEEEEECCC--CHHHHHHHHHcCCcEE-------------Ee-CCCCHHHHHHHHHHHHH
Confidence 35666776666666665555543 4455555666676544 22 34566666666666654
No 438
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=21.27 E-value=1.7e+02 Score=28.46 Aligned_cols=67 Identities=7% Similarity=-0.067 Sum_probs=47.7
Q ss_pred eEEEecCCCHHHHHHH-HHHHHHcCCcEEEeecCCC-CCCC----C-----CCC-cccCChHHHHHHHHHHHHHhhhhh
Q 017179 280 SIMLGCGETPDQVVST-MEKVRAAGVDVMTFGQYMR-PSKR----H-----MPV-SEYITPEAFERYRALGMEMGFRYV 346 (376)
Q Consensus 280 ~imvGlGET~ee~~e~-L~~Lrel~vd~v~~~qY~~-P~~~----~-----~~v-~~~v~pe~~~~l~~~a~~~gf~~~ 346 (376)
.||=+|+-+...+++. ++.|+++||+.|-+.+.+. |... + ..+ .++=+.+.|+.|-+.|.++|.+.+
T Consensus 4 ~~~q~F~w~~~gi~~~lldyL~~LGv~~I~l~Pi~~~~~~~~~~~gY~~~~y~idp~~Gt~~dfk~Lv~~aH~~Gi~Vi 82 (448)
T 1g94_A 4 TFVHLFEWNWQDVAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYELQSRGGNRAQFIDMVNRCSAAGVDIY 82 (448)
T ss_dssp CEEEETTCCHHHHHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEE
T ss_pred EEEEEecCcHHHHHHHHHHHHHHcCCCEEEECCccccCCCCCCcccccccccccCCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 4666779999999987 5999999999887765441 2110 1 112 123457899999999999998764
No 439
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=21.24 E-value=3.9e+02 Score=22.83 Aligned_cols=126 Identities=13% Similarity=0.185 Sum_probs=71.8
Q ss_pred HHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccch
Q 017179 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETV 243 (376)
Q Consensus 164 ~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv 243 (376)
+.++.+.+.|.+.|+|-+....+ ++ ..+.++++.+++.+|+..+-+-. . +.+.+..+.++|+|.+..+.-.
T Consensus 79 ~~i~~~~~~Gad~v~l~~~~~~~-p~---~~~~~~i~~~~~~~~~~~v~~~~--~--t~~e~~~~~~~G~d~i~~~~~g- 149 (223)
T 1y0e_A 79 KEVDELIESQCEVIALDATLQQR-PK---ETLDELVSYIRTHAPNVEIMADI--A--TVEEAKNAARLGFDYIGTTLHG- 149 (223)
T ss_dssp HHHHHHHHHTCSEEEEECSCSCC-SS---SCHHHHHHHHHHHCTTSEEEEEC--S--SHHHHHHHHHTTCSEEECTTTT-
T ss_pred HHHHHHHhCCCCEEEEeeecccC-cc---cCHHHHHHHHHHhCCCceEEecC--C--CHHHHHHHHHcCCCEEEeCCCc-
Confidence 34556678899998886544221 11 12567888998887776553211 1 4566777889999977432110
Q ss_pred HHHHHhhcCCCC-CHHHHHHHHHHHHHhCCCCceEEEeEEEecCC-CHHHHHHHHHHHHHcCCcEEEeecC
Q 017179 244 EELQSAVRDHRA-NFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGE-TPDQVVSTMEKVRAAGVDVMTFGQY 312 (376)
Q Consensus 244 ~~l~~~vr~r~~-t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGE-T~ee~~e~L~~Lrel~vd~v~~~qY 312 (376)
+.... +.. .....++.++.+++.. +++ ++..=|= |.+++.+.+ +.|.|.+-+|..
T Consensus 150 ---~t~~~-~~~~~~~~~~~~~~~~~~~~--~ip----via~GGI~~~~~~~~~~----~~Gad~v~vG~a 206 (223)
T 1y0e_A 150 ---YTSYT-QGQLLYQNDFQFLKDVLQSV--DAK----VIAEGNVITPDMYKRVM----DLGVHCSVVGGA 206 (223)
T ss_dssp ---SSTTS-TTCCTTHHHHHHHHHHHHHC--CSE----EEEESSCCSHHHHHHHH----HTTCSEEEECHH
T ss_pred ---CcCCC-CCCCCCcccHHHHHHHHhhC--CCC----EEEecCCCCHHHHHHHH----HcCCCEEEEChH
Confidence 00011 111 1233467777777642 122 3332255 777776655 468999988743
No 440
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=21.22 E-value=1.5e+02 Score=28.98 Aligned_cols=151 Identities=13% Similarity=0.025 Sum_probs=80.4
Q ss_pred CchhHHHHHHHHHHCCCcEEEEEeeeCCCCCccc--HHHHHHHHHHHHhhC-CCcEEEEecCCCCC--ChH----HHHHH
Q 017179 158 DPDEPTNVAEAIASWGLDYVVITSVDRDDLADQG--SGHFAQTVRKLKELK-PNMLIEALVPDFRG--NNG----CVREV 228 (376)
Q Consensus 158 ~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g--~~~~~elvr~Ik~~~-p~i~Ie~l~pd~~g--~~e----~l~~L 228 (376)
++++..+.++.+.+.|++.+-|=.+..+ .|++ .+.-.+.|++|++.. |++.|.+ |.++ +.+ .++.|
T Consensus 179 ~~e~~~~~a~~~~~~Gf~~iKik~g~gp--~dg~~~~~~die~v~avReavG~d~~L~v---DaN~~~~~~~Ai~~~~~L 253 (412)
T 3stp_A 179 SIEAMQKEAEEAMKGGYKAFKSRFGYGP--KDGMPGMRENLKRVEAVREVIGYDNDLML---ECYMGWNLDYAKRMLPKL 253 (412)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECCCCG--GGHHHHHHHHHHHHHHHHHHHCSSSEEEE---ECTTCSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCc--ccccchHHHHHHHHHHHHHHcCCCCeEEE---ECCCCCCHHHHHHHHHHH
Confidence 6889999999999999999988654321 1222 345677888888876 5665543 2221 322 23444
Q ss_pred HHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEE
Q 017179 229 AKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMT 308 (376)
Q Consensus 229 ~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~ 308 (376)
.+.|++.+ |- - +. ..+ ++.++.+++.. ++++ -.||+.....+..+.++.-.+|+|.
T Consensus 254 e~~~i~~i----Ee---P---~~--~~d----~~~~~~l~~~~--~iPI------a~dE~~~~~~~~~~li~~~a~D~v~ 309 (412)
T 3stp_A 254 APYEPRWL----EE---P---VI--ADD----VAGYAELNAMN--IVPI------SGGEHEFSVIGCAELINRKAVSVLQ 309 (412)
T ss_dssp GGGCCSEE----EC---C---SC--TTC----HHHHHHHHHTC--SSCE------EECTTCCSHHHHHHHHHTTCCSEEC
T ss_pred HhcCCCEE----EC---C---CC--ccc----HHHHHHHHhCC--CCCE------EeCCCCCCHHHHHHHHHcCCCCEEe
Confidence 44444433 21 0 11 122 34445555521 2332 2356555555555556666677765
Q ss_pred eecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhcc
Q 017179 309 FGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVAS 348 (376)
Q Consensus 309 ~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~s 348 (376)
+- +. .+-. ..+...+..+|...|...+..
T Consensus 310 ik----~~----~~GG---it~a~kia~~A~a~gi~v~~h 338 (412)
T 3stp_A 310 YD----TN----RVGG---ITAAQKINAIAEAAQIPVIPH 338 (412)
T ss_dssp CC----HH----HHTH---HHHHHHHHHHHHHHTCCBCCS
T ss_pred cC----hh----hcCC---HHHHHHHHHHHHHcCCEEEec
Confidence 41 11 1101 234556666777777665433
No 441
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=21.13 E-value=2.9e+02 Score=21.33 Aligned_cols=39 Identities=15% Similarity=0.349 Sum_probs=22.9
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++.|++..|.+.|-+++..- +.+.+....++|++.|
T Consensus 66 ~~~~~~l~~~~~~~~ii~ls~~~--~~~~~~~~~~~g~~~~ 104 (154)
T 2qsj_A 66 IDGLVRLKRFDPSNAVALISGET--DHELIRAALEAGADGF 104 (154)
T ss_dssp HHHHHHHHHHCTTSEEEEC-------CHHHHHHHHTTCCBB
T ss_pred HHHHHHHHHhCCCCeEEEEeCCC--CHHHHHHHHHccCCEE
Confidence 45677777777777776666543 3455666667776644
No 442
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=21.13 E-value=2.6e+02 Score=20.76 Aligned_cols=58 Identities=17% Similarity=0.164 Sum_probs=34.5
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHH
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD 269 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~ 269 (376)
.++++.|++..|.+.|-++++.- +.+......++|++.| +. +..+.++.++.++.+.+
T Consensus 63 ~~~~~~l~~~~~~~~ii~~s~~~--~~~~~~~~~~~ga~~~-------------l~-Kp~~~~~l~~~i~~~~~ 120 (126)
T 1dbw_A 63 VELLRNLGDLKINIPSIVITGHG--DVPMAVEAMKAGAVDF-------------IE-KPFEDTVIIEAIERASE 120 (126)
T ss_dssp HHHHHHHHHTTCCCCEEEEECTT--CHHHHHHHHHTTCSEE-------------EE-SSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCEEEEECCC--CHHHHHHHHHhCHHHh-------------ee-CCCCHHHHHHHHHHHHH
Confidence 35677777766776666666543 4556666677776644 22 23556666666665544
No 443
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=21.09 E-value=2.6e+02 Score=23.49 Aligned_cols=105 Identities=15% Similarity=0.133 Sum_probs=59.7
Q ss_pred chhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccccc
Q 017179 159 PDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAH 238 (376)
Q Consensus 159 ~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h 238 (376)
..++.+.++.+...|..++.+++...+... .|.. ++.|++++... ++.+-+..+.- +.+.+.++.++|++.+-.
T Consensus 129 ~~~~~~~i~~~~~~~~~~vli~~~~~~g~~-~g~~--~~~i~~~~~~~-~~Pvia~~g~~--~~~~~~~~~~~G~~~~~v 202 (237)
T 3cwo_X 129 GILLRDWVVEVEKRGAGEILLTSIDRDGTK-SGYD--TEMIRFVRPLT-TLPIIASGGAG--KMEHFLEAFLAGADAALA 202 (237)
T ss_dssp EEEHHHHHHHHHHHTCSEEEEEETTTTTCC-SCCC--HHHHHHHGGGC-CSCEEEESCCC--SHHHHHHHHHHTCSEEEE
T ss_pred ccCHHHHHHHHhhcCCCeEEEEecCCCCcc-cccc--HHHHHHHHHhc-CCCEEecCCCC--CHHHHHHHHHcCcHHHhh
Confidence 356677778888889999999985322211 1222 66788887654 34443333322 567777777888876533
Q ss_pred cccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEE
Q 017179 239 NIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIML 283 (376)
Q Consensus 239 ~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imv 283 (376)
+ ..++ . ...++++.++.++ + .|+.+...+++
T Consensus 203 g----~a~~---~-~~~~~~~~~~~l~---~---~~~~~~~~~~~ 233 (237)
T 3cwo_X 203 A----SVFH---F-REIDVRELKEYLK---K---HGVNVRLEGLL 233 (237)
T ss_dssp S----HHHH---T-TSSCHHHHHHHHH---T---TTCCCCEEEEE
T ss_pred h----HHHH---c-CCCCHHHHHHHHH---H---CCCceehhhhh
Confidence 2 2222 2 3455666555443 3 24545555554
No 444
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=21.04 E-value=5.2e+02 Score=24.28 Aligned_cols=56 Identities=13% Similarity=0.271 Sum_probs=37.1
Q ss_pred HHHHHHHHHCCCcEEEEEeeeC---CCC--------CcccHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 017179 163 TNVAEAIASWGLDYVVITSVDR---DDL--------ADQGSGHFAQTVRKLKELKPNMLIEALVPDF 218 (376)
Q Consensus 163 ~~~a~al~~~G~~eIvLTsg~r---~dl--------~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~ 218 (376)
-.+++.++..|++.+.|.=.+. .++ .|-|...-..+.+.|++.+|.+.|......+
T Consensus 49 ~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~~~~ 115 (346)
T 1y8q_A 49 AEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTEDI 115 (346)
T ss_dssp HHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEECSCG
T ss_pred HHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEeccc
Confidence 3568889999999998874331 111 1223334455667788889999998876544
No 445
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=21.03 E-value=3.7e+02 Score=23.60 Aligned_cols=67 Identities=16% Similarity=0.439 Sum_probs=43.5
Q ss_pred HHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHc--Cccccccc
Q 017179 163 TNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS--GLNVFAHN 239 (376)
Q Consensus 163 ~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~a--Gld~i~h~ 239 (376)
..+++++.+.|.+ |++++ ++ .+...++++.+.+..++..+..+..|.. +.+.++.+.+. ++|++=||
T Consensus 24 ~aia~~l~~~G~~-V~~~~--r~------~~~~~~~~~~l~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~g~id~lv~n 92 (267)
T 3t4x_A 24 KAIATSLVAEGAN-VLING--RR------EENVNETIKEIRAQYPDAILQPVVADLG-TEQGCQDVIEKYPKVDILINN 92 (267)
T ss_dssp HHHHHHHHHTTCE-EEEEE--SS------HHHHHHHHHHHHHHCTTCEEEEEECCTT-SHHHHHHHHHHCCCCSEEEEC
T ss_pred HHHHHHHHHCCCE-EEEEe--CC------HHHHHHHHHHHHhhCCCceEEEEecCCC-CHHHHHHHHHhcCCCCEEEEC
Confidence 4567888888975 55553 32 2345667777877777777777777764 56666666553 57776554
No 446
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=21.02 E-value=2.9e+02 Score=24.59 Aligned_cols=90 Identities=8% Similarity=0.036 Sum_probs=53.7
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHH--HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHH-cCc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHF--AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAK-SGL 233 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~--~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~-aGl 233 (376)
.+++|+ .++.+.|+++|-+ +| ...+ .+.++.|+...|++.+- -++.. +.+.+..+.+ +|+
T Consensus 127 ~t~~e~----~~A~~~Gad~vk~-------FP---a~~~~G~~~lk~i~~~~~~ipvv-aiGGI--~~~N~~~~l~~~Ga 189 (225)
T 1mxs_A 127 STPSEI----MMGYALGYRRFKL-------FP---AEISGGVAAIKAFGGPFGDIRFC-PTGGV--NPANVRNYMALPNV 189 (225)
T ss_dssp CSHHHH----HHHHTTTCCEEEE-------TT---HHHHTHHHHHHHHHTTTTTCEEE-EBSSC--CTTTHHHHHHSTTB
T ss_pred CCHHHH----HHHHHCCCCEEEE-------cc---CccccCHHHHHHHHhhCCCCeEE-EECCC--CHHHHHHHHhccCC
Confidence 455554 3455889999987 33 1222 57788888877777763 33434 5667888888 799
Q ss_pred ccccccccch-HHHHHhhcCCCCCHHHHHHHHHHHHH
Q 017179 234 NVFAHNIETV-EELQSAVRDHRANFKQSLDVLMMAKD 269 (376)
Q Consensus 234 d~i~h~lEtv-~~l~~~vr~r~~t~e~~L~vl~~ak~ 269 (376)
+.+. .=.-. ... +. ..+|+..-+..+.+.+
T Consensus 190 ~~v~-gSai~~~~~---i~--~~~~~~i~~~a~~~~~ 220 (225)
T 1mxs_A 190 MCVG-TTWMLDSSW---IK--NGDWARIEACSAEAIA 220 (225)
T ss_dssp CCEE-ECTTSCHHH---HH--TTCHHHHHHHHHHHHH
T ss_pred EEEE-EchhcCchh---hc--cCCHHHHHHHHHHHHH
Confidence 9887 31111 111 22 2456665555555554
No 447
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=20.84 E-value=2.5e+02 Score=26.45 Aligned_cols=132 Identities=19% Similarity=0.290 Sum_probs=75.5
Q ss_pred HHHHHHCCCcEEEEEeee------CC----CCCcccHH-HHHHHHHHHHhhCCCcEEEE-ecC-C-CCCChHHHHHHHHc
Q 017179 166 AEAIASWGLDYVVITSVD------RD----DLADQGSG-HFAQTVRKLKELKPNMLIEA-LVP-D-FRGNNGCVREVAKS 231 (376)
Q Consensus 166 a~al~~~G~~eIvLTsg~------r~----dl~d~g~~-~~~elvr~Ik~~~p~i~Ie~-l~p-d-~~g~~e~l~~L~~a 231 (376)
|+...+.|++.|++-..- +. -++.+.+. -..++-++|.-...++.|-+ +.+ | +......++.|+++
T Consensus 41 Ak~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~~iPV~Agv~~~DP~~~~g~~Le~lk~~ 120 (286)
T 2p10_A 41 AKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELKEI 120 (286)
T ss_dssp HHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSSCEEEEECTTCTTCCHHHHHHHHHHH
T ss_pred hHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCCCCCEEEEECCcCCCcCHHHHHHHHHHh
Confidence 344556677777764321 11 12222232 34444444433333333322 222 2 33346678999999
Q ss_pred Ccccccccccc---hH-HHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEE
Q 017179 232 GLNVFAHNIET---VE-ELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVM 307 (376)
Q Consensus 232 Gld~i~h~lEt---v~-~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v 307 (376)
|...+ .|.-| .+ .+...+--.+-+|++-.+.|+.|++ .|+.+..-. .+.+|-.. +.+++.|+|
T Consensus 121 Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~---~gL~Ti~~v-----~~~eeA~a----mA~agpDiI 187 (286)
T 2p10_A 121 GFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHK---LDLLTTPYV-----FSPEDAVA----MAKAGADIL 187 (286)
T ss_dssp TCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHH---TTCEECCEE-----CSHHHHHH----HHHHTCSEE
T ss_pred CCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHH---CCCeEEEec-----CCHHHHHH----HHHcCCCEE
Confidence 98776 55443 23 3333332257899999999999999 467654444 57777654 357899988
Q ss_pred Eee
Q 017179 308 TFG 310 (376)
Q Consensus 308 ~~~ 310 (376)
-+-
T Consensus 188 ~~h 190 (286)
T 2p10_A 188 VCH 190 (286)
T ss_dssp EEE
T ss_pred EEC
Confidence 774
No 448
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=20.73 E-value=1.1e+02 Score=30.23 Aligned_cols=89 Identities=10% Similarity=0.183 Sum_probs=0.0
Q ss_pred CCCCCChHHHHHHHHcCcccc-----------cccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEe
Q 017179 216 PDFRGNNGCVREVAKSGLNVF-----------AHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLG 284 (376)
Q Consensus 216 pd~~g~~e~l~~L~~aGld~i-----------~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvG 284 (376)
+||.|-.+.|..|++.|++.+ .|+-++++ |..|.|+=.+.++..++++.||+ .||.|--++++.
T Consensus 29 Gdl~Gi~~kLdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~d--y~~vdp~~Gt~~dfk~Lv~~aH~---~Gi~VilD~V~N 103 (549)
T 4aie_A 29 GDLQGIISRLDYLEKLGIDAIWLSPVYQSPGVDNGYDISD--YEAIDPQYGTMADMDELISKAKE---HHIKIVMDLVVN 103 (549)
T ss_dssp CCHHHHHTTHHHHHHHTCSEEEECCCEECCCTTTTSSCSE--EEEECTTTCCHHHHHHHHHHHHH---TTCEEEEEECCS
T ss_pred cCHHHHHHhhHHHHHCCCCEEEeCCCcCCCCCCCCcCccC--CCCcCcccCCHHHHHHHHHHHHH---CCCEEEEEECcc
Q ss_pred c-CCC----------------------------------------------------------------------HHHHH
Q 017179 285 C-GET----------------------------------------------------------------------PDQVV 293 (376)
Q Consensus 285 l-GET----------------------------------------------------------------------~ee~~ 293 (376)
+ |.. .+.+.
T Consensus 104 Hts~~~~wf~~~~~~~~~~~~~~y~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~dln~~np~v~~~i~ 183 (549)
T 4aie_A 104 HTSDQHKWFVEAKKGKDNQYRDYYIWRDPVDEHEPNDLKSAFSGSAWKYDERSGQYYLHFFADQQPDLNWQNTELRQKIY 183 (549)
T ss_dssp BCCTTSHHHHHHTTCTTSTTGGGBCEECCBTTBCSSCCBCTTSSBSEEEETTTTEEEECSSCTTSCBBCTTCHHHHHHHH
T ss_pred CCcCCcchhhhhhhcccccccccccccCCcccCCCCCcccccCCCcccccccCCceEecccCCCCCccccCCHHHHHHHH
Q ss_pred HHHHHHHHcCCcEEEe
Q 017179 294 STMEKVRAAGVDVMTF 309 (376)
Q Consensus 294 e~L~~Lrel~vd~v~~ 309 (376)
+.+.+..+.+||-+-+
T Consensus 184 ~~~~~W~e~gvDGfRl 199 (549)
T 4aie_A 184 NMMNFWLDKGIGGFRM 199 (549)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhcCCceeE
No 449
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=20.62 E-value=3.7e+02 Score=22.35 Aligned_cols=68 Identities=13% Similarity=0.179 Sum_probs=42.1
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCC-CcEEEEecCCCCCChHHHHHHHHcCccc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKP-NMLIEALVPDFRGNNGCVREVAKSGLNV 235 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p-~i~Ie~l~pd~~g~~e~l~~L~~aGld~ 235 (376)
.+++++ ++++.+.+.+-|.|++-.... ...+.++++.|++..+ ++.| +.+... ..+....+.+.|+|.
T Consensus 56 ~p~e~l---v~aa~~~~~diV~lS~~~~~~-----~~~~~~~i~~L~~~g~~~i~v--~vGG~~-~~~~~~~l~~~G~d~ 124 (161)
T 2yxb_A 56 QTPEQV---AMAAVQEDVDVIGVSILNGAH-----LHLMKRLMAKLRELGADDIPV--VLGGTI-PIPDLEPLRSLGIRE 124 (161)
T ss_dssp CCHHHH---HHHHHHTTCSEEEEEESSSCH-----HHHHHHHHHHHHHTTCTTSCE--EEEECC-CHHHHHHHHHTTCCE
T ss_pred CCHHHH---HHHHHhcCCCEEEEEeechhh-----HHHHHHHHHHHHhcCCCCCEE--EEeCCC-chhcHHHHHHCCCcE
Confidence 456665 455667889988887754321 4567788888887643 4433 222111 244566788999995
No 450
>2xsa_A Ogoga, hyaluronoglucosaminidase; O-GLCNACYLATION, O-GLCNACASE, glycosyl hydrolase, hydrolase; 2.00A {Oceanicola granulosus} PDB: 2xsb_A*
Probab=20.58 E-value=3.5e+02 Score=27.05 Aligned_cols=62 Identities=19% Similarity=0.338 Sum_probs=39.7
Q ss_pred eEEEec-C--CCHHHHHHHHHHHHHcCCcEEEeecCCCCC--CCCC-CCcccCChHHHHHHHHH---HHHHhhhh
Q 017179 280 SIMLGC-G--ETPDQVVSTMEKVRAAGVDVMTFGQYMRPS--KRHM-PVSEYITPEAFERYRAL---GMEMGFRY 345 (376)
Q Consensus 280 ~imvGl-G--ET~ee~~e~L~~Lrel~vd~v~~~qY~~P~--~~~~-~v~~~v~pe~~~~l~~~---a~~~gf~~ 345 (376)
|+|=|| | -|.||+.++|+++.+.+...--.+ |- ..|. ...+..+.++.+.++++ |.+-|..+
T Consensus 4 GvIEGFYG~PWS~e~R~~l~~f~g~~kmNtYiYA----PKDDpyhr~~WRe~Yp~eel~~l~eLv~~a~~~~V~F 74 (447)
T 2xsa_A 4 GVIEGFYGRDWRRDERATVMDWIAAAGMNTYIYG----PKDDVHVRARWRVPYDAAGLARLTELRDAAAARGMVF 74 (447)
T ss_dssp EEEECCSSSCCCHHHHHHHHHHHHHTTCCEEEEC----CTTCTTTTTTTTSCCCHHHHHHHHHHHHHHHTTTCEE
T ss_pred EEEeccCCCCCCHHHHHHHHHHHHHcCCceEEEc----cCCChHHHHhhcccCCHHHHHHHHHHHHHHHHcCCEE
Confidence 778888 7 799999999999999997654443 51 1222 23344555665555554 45555433
No 451
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=20.36 E-value=3.3e+02 Score=25.14 Aligned_cols=73 Identities=11% Similarity=0.207 Sum_probs=42.4
Q ss_pred HHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCccccccc-ccch
Q 017179 165 VAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHN-IETV 243 (376)
Q Consensus 165 ~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i~h~-lEtv 243 (376)
.++.+...|++.|+|-.-+ -+. ..+.+...++.+......+.|++. .. +...|+.+.++|++.+-.- +++.
T Consensus 52 ~~e~a~~~GaD~v~lDlEh---~~~-~~~~~~~~l~a~~~~~~~~~VRv~--~~--d~~di~~~ld~ga~~ImlP~V~sa 123 (287)
T 2v5j_A 52 SAELLAGAGFDWLLIDGEH---APN-NVQTVLTQLQAIAPYPSQPVVRPS--WN--DPVQIKQLLDVGTQTLLVPMVQNA 123 (287)
T ss_dssp HHHHHHTSCCSEEEEESSS---SSC-CHHHHHHHHHHHTTSSSEEEEECS--SS--CHHHHHHHHHTTCCEEEESCCCSH
T ss_pred HHHHHHhCCCCEEEEeCCC---ccc-hHHHHHHHHHHHHhcCCCEEEEEC--CC--CHHHHHHHHhCCCCEEEeCCCCCH
Confidence 4456678899988874332 221 245566666665432112445543 22 5668899999998855332 5555
Q ss_pred HH
Q 017179 244 EE 245 (376)
Q Consensus 244 ~~ 245 (376)
++
T Consensus 124 ee 125 (287)
T 2v5j_A 124 DE 125 (287)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 452
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=20.28 E-value=2.8e+02 Score=20.82 Aligned_cols=39 Identities=10% Similarity=0.038 Sum_probs=26.5
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 196 AQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 196 ~elvr~Ik~~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++.|++..|.+.|-++++.. +.+......++|++.|
T Consensus 68 ~~~~~~l~~~~~~~~ii~ls~~~--~~~~~~~~~~~g~~~~ 106 (140)
T 2qr3_A 68 LFWLHEIKRQYRDLPVVLFTAYA--DIDLAVRGIKEGASDF 106 (140)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEGG--GHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHhhCcCCCEEEEECCC--CHHHHHHHHHcCchhe
Confidence 46777787777777776666543 4556667777887654
No 453
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=20.26 E-value=2.9e+02 Score=26.64 Aligned_cols=114 Identities=15% Similarity=0.165 Sum_probs=0.0
Q ss_pred hHHHHHHHHcCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec--CCCHHHHHHHHHHH
Q 017179 222 NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC--GETPDQVVSTMEKV 299 (376)
Q Consensus 222 ~e~l~~L~~aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl--GET~ee~~e~L~~L 299 (376)
.+.++.+++-|+..+... ..+..+...+ +.+++++++.+..+.+.......+++.+|+.+ ..+.++..++++.+
T Consensus 99 ~e~~ed~a~dgV~Y~Eir--f~P~~~~~~~--Gl~~~~vv~av~~g~~~a~~~~gi~~rlI~~~~R~~~~e~a~~~~~~a 174 (380)
T 4gxw_A 99 YEYLEDAAAHNVRHAEFF--WNPTGTVRVS--GIPYADAQAAIVTGMRDAARDFGIGARLIPSIDREQDPDEAVAIVDWM 174 (380)
T ss_dssp HHHHHHHHTTTEEEEEEE--ECHHHHHHTT--CCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEETTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEE--cCHHHhcccc--CCCHHHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCHHHHHHHHHHH
Q ss_pred HHcCCc-EEEeecCCCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhhc
Q 017179 300 RAAGVD-VMTFGQYMRPSKRHMPVSEYITPEAFERYRALGMEMGFRYVA 347 (376)
Q Consensus 300 rel~vd-~v~~~qY~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~~ 347 (376)
.+...+ ++.|+ +--.-.+.| |+.|...-+.|++.|+..++
T Consensus 175 ~~~~~~~VvG~d--L~g~E~~~p------~~~f~~~f~~ar~~Gl~~t~ 215 (380)
T 4gxw_A 175 KANRADEVAGIG--IDYRENDRP------PELFWKAYRDARAAGFRTTA 215 (380)
T ss_dssp HHTCCTTBCEEE--EESCCTTCC------GGGGHHHHHHHHHTTCEEEE
T ss_pred HHhCCCCEEEEe--ecCCCCCCC------HHHHHHHHHHHHHcCCCeee
No 454
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=20.19 E-value=5.2e+02 Score=23.95 Aligned_cols=131 Identities=15% Similarity=0.167 Sum_probs=76.8
Q ss_pred HHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhh---CC-CcEEEEecCC-CCC---Ch-----HHHHHHHH
Q 017179 164 NVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKEL---KP-NMLIEALVPD-FRG---NN-----GCVREVAK 230 (376)
Q Consensus 164 ~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~---~p-~i~Ie~l~pd-~~g---~~-----e~l~~L~~ 230 (376)
..++.+.++|++-|-++.--++|.++ ....+.++++.+. +. .+.++++... ..+ ++ +..+.+.+
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~d~~~---~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~ 188 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRSDEDA---QQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGD 188 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECTTSCH---HHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTT
T ss_pred hhHHHHHHcCCCEEEEEEEcCCCccH---HHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHH
Confidence 45677789999999888876665432 2333444444332 21 1455654321 111 12 23555666
Q ss_pred cCcccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEec-CCCHHHHHHHHHHHHHcCCcEEEe
Q 017179 231 SGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGC-GETPDQVVSTMEKVRAAGVDVMTF 309 (376)
Q Consensus 231 aGld~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGl-GET~ee~~e~L~~Lrel~vd~v~~ 309 (376)
.|+|++....= ++ ...+.+...++++...... ++ -+++-. |.+.+++++.+..+.+.+.+.+-+
T Consensus 189 lGaD~iKv~~~-~~--------~~g~~~~~~~vv~~~~~~~--~~----P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~v 253 (304)
T 1to3_A 189 SGADLYKVEMP-LY--------GKGARSDLLTASQRLNGHI--NM----PWVILSSGVDEKLFPRAVRVAMEAGASGFLA 253 (304)
T ss_dssp SSCSEEEECCG-GG--------GCSCHHHHHHHHHHHHHTC--CS----CEEECCTTSCTTTHHHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEeCCC-cC--------CCCCHHHHHHHHHhccccC--CC----CeEEEecCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 78887644310 01 1125666666766543311 11 235555 779999999999999999999888
Q ss_pred ecC
Q 017179 310 GQY 312 (376)
Q Consensus 310 ~qY 312 (376)
|.-
T Consensus 254 GRa 256 (304)
T 1to3_A 254 GRA 256 (304)
T ss_dssp SHH
T ss_pred ehH
Confidence 754
No 455
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=20.01 E-value=5.7e+02 Score=24.32 Aligned_cols=151 Identities=14% Similarity=0.049 Sum_probs=79.6
Q ss_pred CCchhHHHHHHHHHHCCCcEEEEEeeeCCCCCcccHHHHHHHHHHHHhhC-CCcEEEEecCCCCC--ChHHHHHHHHcCc
Q 017179 157 PDPDEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELK-PNMLIEALVPDFRG--NNGCVREVAKSGL 233 (376)
Q Consensus 157 l~~eEi~~~a~al~~~G~~eIvLTsg~r~dl~d~g~~~~~elvr~Ik~~~-p~i~Ie~l~pd~~g--~~e~l~~L~~aGl 233 (376)
.+++++.+.++++.+.|++.+-|=-|..+.. ...+.-.+.|++|++.. |++.+.+ |.++ +.+....+.+. +
T Consensus 144 ~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~--~~~~~d~~~v~avR~a~G~~~~L~v---DaN~~~~~~~A~~~~~~-l 217 (386)
T 3fv9_G 144 DTPEAMRAKVARHRAQGFKGHSIKIGASEAE--GGPALDAERITACLADRQPGEWYLA---DANNGLTVEHALRMLSL-L 217 (386)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCCTTT--THHHHHHHHHHHHTTTCCTTCEEEE---ECTTCCCHHHHHHHHHH-S
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeccCCCCC--CCHHHHHHHHHHHHHHcCCCCeEEE---ECCCCCCHHHHHHHHHH-h
Confidence 4688999999999999999998864422111 11344567888998876 5655542 2221 33333333222 2
Q ss_pred -ccccccccchHHHHHhhcCCCCCHHHHHHHHHHHHHhCCCCceEEEeEEEecCCCHHHHHHHHHHHHHcCCcEEEeecC
Q 017179 234 -NVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTKTSIMLGCGETPDQVVSTMEKVRAAGVDVMTFGQY 312 (376)
Q Consensus 234 -d~i~h~lEtv~~l~~~vr~r~~t~e~~L~vl~~ak~~~p~Gi~tkt~imvGlGET~ee~~e~L~~Lrel~vd~v~~~qY 312 (376)
+-++..+|- +-.++ +.++.+++. + ++=+-.||+.....+..+.++.-.+|++.+-
T Consensus 218 ~~~~~i~iEe----------P~~~~----~~~~~l~~~------~--~iPIa~dE~~~~~~~~~~~~~~~a~d~v~~k-- 273 (386)
T 3fv9_G 218 PPGLDIVLEA----------PCASW----AETKSLRAR------C--ALPLLLDELIQTETDLIAAIRDDLCDGVGLK-- 273 (386)
T ss_dssp CSSCCCEEEC----------CCSSH----HHHHHHHTT------C--CSCEEESTTCCSHHHHHHHHHTTCCSEEEEE--
T ss_pred hccCCcEEec----------CCCCH----HHHHHHHhh------C--CCCEEeCCCcCCHHHHHHHHHhCCCCEEEEC--
Confidence 222223442 11122 334444442 1 1223345665555555555666667777663
Q ss_pred CCCCCCCCCCcccCChHHHHHHHHHHHHHhhhhh
Q 017179 313 MRPSKRHMPVSEYITPEAFERYRALGMEMGFRYV 346 (376)
Q Consensus 313 ~~P~~~~~~v~~~v~pe~~~~l~~~a~~~gf~~~ 346 (376)
|.+-+- ..+...+..+|...|...+
T Consensus 274 --~~~~GG-------it~~~~i~~~A~~~gi~~~ 298 (386)
T 3fv9_G 274 --VSKQGG-------ITPMLRQRAIAAAAGMVMS 298 (386)
T ss_dssp --HHHHTS-------HHHHHHHHHHHHHTTCEEE
T ss_pred --ccccCC-------HHHHHHHHHHHHHcCCEEE
Confidence 211111 2345566667777776554
No 456
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=20.00 E-value=3e+02 Score=21.00 Aligned_cols=39 Identities=15% Similarity=0.123 Sum_probs=24.8
Q ss_pred HHHHHHHHh--hCCCcEEEEecCCCCCChHHHHHHHHcCcccc
Q 017179 196 AQTVRKLKE--LKPNMLIEALVPDFRGNNGCVREVAKSGLNVF 236 (376)
Q Consensus 196 ~elvr~Ik~--~~p~i~Ie~l~pd~~g~~e~l~~L~~aGld~i 236 (376)
.++++.|++ ..+.+.|-+++... +.+......++|++.|
T Consensus 68 ~~~~~~l~~~~~~~~~pii~ls~~~--~~~~~~~~~~~g~~~~ 108 (147)
T 2zay_A 68 MDLFNSLKKNPQTASIPVIALSGRA--TAKEEAQLLDMGFIDF 108 (147)
T ss_dssp HHHHHHHHTSTTTTTSCEEEEESSC--CHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHcCcccCCCCEEEEeCCC--CHHHHHHHHhCCCCEE
Confidence 466777776 45666666666544 4566666667776644
Done!