Query 017180
Match_columns 376
No_of_seqs 311 out of 1512
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 06:18:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017180.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017180hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 4.2E-37 9.1E-42 271.7 28.0 276 63-370 10-293 (294)
2 PLN02679 hydrolase, alpha/beta 100.0 1.1E-36 2.4E-41 275.0 30.2 283 61-371 61-357 (360)
3 PRK03592 haloalkane dehalogena 100.0 8.1E-35 1.7E-39 257.2 25.2 269 73-373 15-291 (295)
4 PLN02578 hydrolase 100.0 2E-34 4.4E-39 260.0 28.0 279 63-369 68-353 (354)
5 TIGR02240 PHA_depoly_arom poly 100.0 9E-35 2E-39 254.3 23.9 259 72-372 9-267 (276)
6 KOG4178 Soluble epoxide hydrol 100.0 1.1E-33 2.5E-38 237.8 20.2 282 62-371 23-320 (322)
7 PRK00870 haloalkane dehalogena 100.0 4.7E-33 1E-37 246.6 25.1 257 75-371 34-301 (302)
8 PRK03204 haloalkane dehalogena 100.0 6.3E-33 1.4E-37 243.2 24.4 260 74-368 23-285 (286)
9 PLN03084 alpha/beta hydrolase 100.0 8.3E-32 1.8E-36 242.0 26.3 267 68-370 108-383 (383)
10 TIGR03056 bchO_mg_che_rel puta 100.0 9.7E-32 2.1E-36 235.7 26.2 263 73-369 14-278 (278)
11 TIGR03343 biphenyl_bphD 2-hydr 100.0 2.1E-31 4.5E-36 234.2 26.3 258 74-369 19-281 (282)
12 PRK10349 carboxylesterase BioH 100.0 5.9E-32 1.3E-36 234.1 22.3 250 76-370 3-255 (256)
13 PLN02965 Probable pheophorbida 100.0 2.6E-32 5.7E-37 235.8 18.2 246 91-372 4-254 (255)
14 PLN03087 BODYGUARD 1 domain co 100.0 9.4E-31 2E-35 239.4 28.6 276 71-370 182-478 (481)
15 PRK10673 acyl-CoA esterase; Pr 100.0 7.1E-31 1.5E-35 227.3 22.7 252 76-370 2-254 (255)
16 PRK06489 hypothetical protein; 100.0 8.8E-31 1.9E-35 237.1 24.2 271 73-372 48-358 (360)
17 PLN02385 hydrolase; alpha/beta 100.0 7.5E-31 1.6E-35 236.8 23.6 268 70-373 67-347 (349)
18 TIGR02427 protocat_pcaD 3-oxoa 100.0 1.9E-30 4.1E-35 223.4 22.3 249 77-369 2-251 (251)
19 TIGR03611 RutD pyrimidine util 100.0 3.8E-30 8.2E-35 222.7 21.8 254 78-370 2-257 (257)
20 PHA02857 monoglyceride lipase; 100.0 3.4E-29 7.5E-34 219.2 26.6 257 72-371 8-273 (276)
21 KOG1454 Predicted hydrolase/ac 100.0 3.9E-30 8.5E-35 226.2 19.1 259 90-372 58-325 (326)
22 PRK07581 hypothetical protein; 100.0 1.5E-29 3.2E-34 227.8 23.0 280 73-373 24-338 (339)
23 PRK11126 2-succinyl-6-hydroxy- 100.0 1.5E-29 3.2E-34 217.2 21.8 238 90-370 2-241 (242)
24 KOG4409 Predicted hydrolase/ac 100.0 1.1E-28 2.5E-33 208.1 25.3 263 90-371 90-364 (365)
25 PRK10749 lysophospholipase L2; 100.0 2.4E-29 5.2E-34 225.0 22.3 273 71-371 37-329 (330)
26 PLN02298 hydrolase, alpha/beta 100.0 7.9E-29 1.7E-33 222.3 25.3 265 72-374 40-320 (330)
27 PRK08775 homoserine O-acetyltr 100.0 2.1E-29 4.5E-34 226.8 21.2 264 73-373 44-341 (343)
28 PRK14875 acetoin dehydrogenase 100.0 1E-28 2.2E-33 225.6 26.2 252 74-370 118-370 (371)
29 TIGR01738 bioH putative pimelo 100.0 7.6E-29 1.6E-33 212.7 22.8 238 91-368 5-245 (245)
30 PRK00175 metX homoserine O-ace 100.0 2E-28 4.4E-33 222.6 23.7 280 74-373 32-376 (379)
31 TIGR01392 homoserO_Ac_trn homo 100.0 1.7E-28 3.6E-33 221.6 22.3 277 74-369 15-351 (351)
32 PLN02211 methyl indole-3-aceta 100.0 8.4E-29 1.8E-33 215.1 19.1 259 73-371 5-270 (273)
33 TIGR01250 pro_imino_pep_2 prol 100.0 1.5E-27 3.3E-32 209.7 26.5 263 74-369 11-288 (288)
34 PLN02894 hydrolase, alpha/beta 100.0 4.3E-27 9.4E-32 214.7 29.3 276 76-373 93-387 (402)
35 PF12697 Abhydrolase_6: Alpha/ 100.0 9.8E-29 2.1E-33 209.3 15.0 225 93-363 1-228 (228)
36 TIGR03695 menH_SHCHC 2-succiny 100.0 1.5E-27 3.3E-32 205.0 22.2 246 91-369 2-251 (251)
37 PLN02652 hydrolase; alpha/beta 100.0 3.6E-27 7.7E-32 213.4 22.8 265 69-373 115-389 (395)
38 COG2267 PldB Lysophospholipase 99.9 5.8E-26 1.3E-30 197.9 23.7 270 71-374 16-297 (298)
39 PLN02980 2-oxoglutarate decarb 99.9 3.6E-26 7.9E-31 238.5 26.5 270 69-374 1350-1642(1655)
40 PRK05855 short chain dehydroge 99.9 3.9E-27 8.5E-32 228.0 17.7 268 73-372 11-293 (582)
41 KOG1455 Lysophospholipase [Lip 99.9 9.4E-26 2E-30 187.0 21.7 261 74-371 37-312 (313)
42 KOG2984 Predicted hydrolase [G 99.9 8.9E-27 1.9E-31 180.2 12.0 243 72-371 28-276 (277)
43 TIGR01249 pro_imino_pep_1 prol 99.9 2.2E-25 4.8E-30 197.6 22.3 115 73-203 13-129 (306)
44 PLN02511 hydrolase 99.9 3.4E-25 7.4E-30 201.5 18.3 247 90-372 100-366 (388)
45 TIGR01607 PST-A Plasmodium sub 99.9 3E-24 6.6E-29 191.5 22.5 263 73-369 6-331 (332)
46 PRK06765 homoserine O-acetyltr 99.9 3.9E-23 8.5E-28 186.4 23.4 274 74-370 40-387 (389)
47 PRK05077 frsA fermentation/res 99.9 1.6E-22 3.5E-27 184.7 25.8 218 90-372 194-413 (414)
48 KOG2382 Predicted alpha/beta h 99.9 9.2E-23 2E-27 172.3 20.4 249 90-372 52-314 (315)
49 COG1647 Esterase/lipase [Gener 99.9 6.2E-23 1.3E-27 162.0 16.5 223 90-370 15-243 (243)
50 PRK13604 luxD acyl transferase 99.9 6.5E-22 1.4E-26 169.2 20.6 221 74-354 19-247 (307)
51 PRK10985 putative hydrolase; P 99.9 6.8E-22 1.5E-26 176.4 21.3 247 90-374 58-323 (324)
52 TIGR03100 hydr1_PEP hydrolase, 99.9 2.7E-21 6E-26 168.2 23.2 234 90-370 26-274 (274)
53 PRK11071 esterase YqiA; Provis 99.9 1.3E-20 2.9E-25 154.0 17.9 185 91-369 2-189 (190)
54 PRK10566 esterase; Provisional 99.9 1.4E-19 3E-24 155.9 20.9 220 77-371 15-248 (249)
55 PF00561 Abhydrolase_1: alpha/ 99.9 1.1E-21 2.4E-26 166.8 7.7 222 124-365 1-229 (230)
56 KOG2564 Predicted acetyltransf 99.8 1.2E-20 2.7E-25 153.8 12.9 104 90-202 74-180 (343)
57 TIGR01838 PHA_synth_I poly(R)- 99.8 1E-19 2.2E-24 168.6 18.4 245 90-358 188-462 (532)
58 TIGR01836 PHA_synth_III_C poly 99.8 3E-19 6.5E-24 161.2 20.9 100 90-204 62-171 (350)
59 COG0596 MhpC Predicted hydrola 99.8 1.2E-18 2.6E-23 150.7 22.6 264 74-369 9-280 (282)
60 PLN02872 triacylglycerol lipas 99.8 1.1E-18 2.4E-23 157.6 20.2 268 90-374 74-392 (395)
61 KOG1552 Predicted alpha/beta h 99.8 7.8E-19 1.7E-23 143.3 15.2 192 90-373 60-254 (258)
62 KOG4391 Predicted alpha/beta h 99.8 6.8E-19 1.5E-23 138.3 12.4 203 90-372 78-283 (300)
63 TIGR03101 hydr2_PEP hydrolase, 99.8 2.6E-18 5.6E-23 146.5 13.6 107 90-203 25-133 (266)
64 PF12695 Abhydrolase_5: Alpha/ 99.8 7.8E-18 1.7E-22 132.4 15.4 143 92-351 1-145 (145)
65 PRK07868 acyl-CoA synthetase; 99.8 2.1E-17 4.5E-22 167.8 21.8 268 90-373 67-363 (994)
66 COG0429 Predicted hydrolase of 99.8 2.8E-17 6.1E-22 138.8 17.3 242 90-373 75-342 (345)
67 PF06342 DUF1057: Alpha/beta h 99.8 2.6E-16 5.7E-21 130.2 20.0 116 76-205 22-138 (297)
68 KOG2931 Differentiation-relate 99.8 3E-16 6.4E-21 129.5 20.2 261 76-370 33-305 (326)
69 COG2021 MET2 Homoserine acetyl 99.7 8.8E-16 1.9E-20 132.0 22.2 279 74-370 35-367 (368)
70 TIGR02821 fghA_ester_D S-formy 99.7 2.2E-15 4.8E-20 131.2 23.4 133 63-203 13-172 (275)
71 KOG4667 Predicted esterase [Li 99.7 3.1E-16 6.7E-21 123.4 14.6 216 90-369 33-256 (269)
72 PRK11460 putative hydrolase; P 99.7 1.6E-16 3.6E-21 134.4 14.0 107 90-202 16-136 (232)
73 PF03096 Ndr: Ndr family; Int 99.7 3.4E-16 7.3E-21 131.4 13.8 256 76-371 10-279 (283)
74 COG3208 GrsT Predicted thioest 99.7 4.3E-15 9.4E-20 120.7 19.0 223 90-370 7-235 (244)
75 KOG1838 Alpha/beta hydrolase [ 99.7 5.8E-15 1.3E-19 129.5 19.1 247 90-371 125-388 (409)
76 PLN02442 S-formylglutathione h 99.7 6.6E-15 1.4E-19 128.5 19.6 102 90-203 47-177 (283)
77 COG1506 DAP2 Dipeptidyl aminop 99.7 7E-15 1.5E-19 141.7 21.4 238 62-373 364-618 (620)
78 TIGR03230 lipo_lipase lipoprot 99.6 1.4E-15 3.1E-20 137.2 11.7 113 90-204 41-154 (442)
79 PLN00021 chlorophyllase 99.6 1.3E-14 2.8E-19 127.3 15.9 105 90-203 52-165 (313)
80 PF00326 Peptidase_S9: Prolyl 99.6 8.7E-15 1.9E-19 122.8 13.4 197 108-373 3-211 (213)
81 TIGR01840 esterase_phb esteras 99.6 3.9E-14 8.4E-19 118.6 13.9 107 90-202 13-128 (212)
82 PF10230 DUF2305: Uncharacteri 99.6 9E-13 1.9E-17 113.4 20.5 111 90-204 2-122 (266)
83 cd00707 Pancreat_lipase_like P 99.6 5.6E-15 1.2E-19 127.9 6.9 109 90-204 36-147 (275)
84 PF01738 DLH: Dienelactone hyd 99.5 3.6E-13 7.7E-18 113.4 16.7 180 90-371 14-217 (218)
85 PRK10162 acetyl esterase; Prov 99.5 9.2E-13 2E-17 117.1 19.6 104 90-203 81-194 (318)
86 TIGR00976 /NonD putative hydro 99.5 4.8E-13 1E-17 127.8 18.9 123 73-203 5-131 (550)
87 PF12146 Hydrolase_4: Putative 99.5 6.7E-14 1.5E-18 95.9 8.7 78 74-158 1-79 (79)
88 PF06500 DUF1100: Alpha/beta h 99.5 6.1E-13 1.3E-17 117.9 16.3 215 90-371 190-409 (411)
89 PF00975 Thioesterase: Thioest 99.5 1.2E-12 2.5E-17 111.3 16.3 98 91-202 1-102 (229)
90 TIGR01839 PHA_synth_II poly(R) 99.5 1.3E-12 2.8E-17 120.3 17.5 104 90-204 215-328 (560)
91 KOG2565 Predicted hydrolases o 99.5 5.8E-13 1.3E-17 113.5 13.3 121 71-199 130-259 (469)
92 PF02230 Abhydrolase_2: Phosph 99.5 2.1E-12 4.5E-17 108.5 16.4 179 90-371 14-215 (216)
93 COG4757 Predicted alpha/beta h 99.5 1.8E-12 3.9E-17 103.6 13.5 237 92-368 32-280 (281)
94 PF05448 AXE1: Acetyl xylan es 99.4 4.9E-11 1.1E-15 105.0 21.2 213 90-370 83-319 (320)
95 PF05728 UPF0227: Uncharacteri 99.4 2.5E-11 5.3E-16 97.9 17.7 87 93-203 2-90 (187)
96 COG2945 Predicted hydrolase of 99.4 9.4E-12 2E-16 96.9 14.1 171 90-369 28-205 (210)
97 TIGR03502 lipase_Pla1_cef extr 99.4 3.1E-12 6.8E-17 122.8 12.3 111 73-189 426-575 (792)
98 PF06821 Ser_hydrolase: Serine 99.4 9.9E-12 2.1E-16 99.2 12.9 154 93-355 1-157 (171)
99 PF08538 DUF1749: Protein of u 99.3 4E-11 8.6E-16 102.1 14.3 104 90-204 33-148 (303)
100 PF02273 Acyl_transf_2: Acyl t 99.3 4.1E-10 8.8E-15 91.2 19.2 225 73-357 11-242 (294)
101 TIGR01849 PHB_depoly_PhaZ poly 99.3 1.5E-10 3.2E-15 103.9 18.6 100 91-204 103-208 (406)
102 COG0412 Dienelactone hydrolase 99.3 5.1E-10 1.1E-14 94.5 19.3 181 90-373 27-235 (236)
103 COG0400 Predicted esterase [Ge 99.3 4.8E-11 1E-15 97.4 12.3 171 90-371 18-205 (207)
104 COG3458 Acetyl esterase (deace 99.3 5.3E-11 1.2E-15 97.6 12.2 215 90-373 83-319 (321)
105 PRK10252 entF enterobactin syn 99.3 3.4E-11 7.4E-16 127.4 14.4 99 90-202 1068-1169(1296)
106 COG3571 Predicted hydrolase of 99.2 1.1E-09 2.4E-14 82.5 16.1 180 91-371 15-211 (213)
107 PRK10115 protease 2; Provision 99.2 2.1E-09 4.6E-14 104.7 21.7 125 71-203 423-558 (686)
108 PF02129 Peptidase_S15: X-Pro 99.2 1.8E-09 4E-14 94.0 17.1 124 73-204 1-136 (272)
109 PRK05371 x-prolyl-dipeptidyl a 99.2 3E-09 6.5E-14 104.4 19.5 88 111-203 271-372 (767)
110 PF07859 Abhydrolase_3: alpha/ 99.1 3.9E-10 8.5E-15 94.4 11.0 103 93-203 1-109 (211)
111 PF09752 DUF2048: Uncharacteri 99.1 4.8E-09 1.1E-13 90.9 16.2 227 90-369 92-347 (348)
112 PTZ00472 serine carboxypeptida 99.0 7.9E-08 1.7E-12 89.4 22.6 123 74-203 60-215 (462)
113 KOG1515 Arylacetamide deacetyl 99.0 4.3E-08 9.3E-13 86.2 19.5 109 89-204 89-207 (336)
114 PF07819 PGAP1: PGAP1-like pro 99.0 2.6E-09 5.6E-14 89.5 10.5 111 90-203 4-122 (225)
115 COG3545 Predicted esterase of 99.0 2.5E-08 5.5E-13 77.1 14.5 173 91-371 3-179 (181)
116 PF06028 DUF915: Alpha/beta hy 99.0 1.1E-08 2.5E-13 86.5 13.9 111 90-204 11-143 (255)
117 COG0657 Aes Esterase/lipase [L 99.0 5.4E-08 1.2E-12 86.6 18.1 107 90-203 79-190 (312)
118 COG3243 PhaC Poly(3-hydroxyalk 99.0 2.6E-08 5.7E-13 87.6 14.7 255 90-372 107-400 (445)
119 PF06057 VirJ: Bacterial virul 99.0 7.6E-09 1.6E-13 81.9 10.3 99 92-203 4-106 (192)
120 KOG4627 Kynurenine formamidase 99.0 5.3E-09 1.1E-13 82.4 9.2 192 78-356 57-252 (270)
121 PF10503 Esterase_phd: Esteras 98.9 5.7E-08 1.2E-12 80.4 15.7 109 90-203 16-131 (220)
122 PF12740 Chlorophyllase2: Chlo 98.9 1.2E-08 2.7E-13 85.4 11.5 105 90-203 17-130 (259)
123 COG3319 Thioesterase domains o 98.9 7.8E-09 1.7E-13 87.2 10.0 99 91-203 1-102 (257)
124 KOG3975 Uncharacterized conser 98.9 4.2E-07 9.2E-12 74.1 18.6 250 90-368 29-300 (301)
125 PF03959 FSH1: Serine hydrolas 98.9 1.8E-08 3.8E-13 84.1 9.9 165 90-355 4-205 (212)
126 PLN02733 phosphatidylcholine-s 98.8 9.3E-09 2E-13 94.0 8.2 94 103-207 105-204 (440)
127 PRK04940 hypothetical protein; 98.8 4.6E-07 1E-11 71.7 16.3 54 312-370 124-179 (180)
128 KOG2551 Phospholipase/carboxyh 98.8 4E-07 8.6E-12 73.2 15.2 58 312-371 163-220 (230)
129 KOG2624 Triglyceride lipase-ch 98.8 7.6E-07 1.6E-11 80.1 18.8 103 90-204 73-199 (403)
130 smart00824 PKS_TE Thioesterase 98.8 2E-07 4.4E-12 77.7 14.6 88 103-202 10-100 (212)
131 KOG3043 Predicted hydrolase re 98.8 5.1E-08 1.1E-12 78.3 9.4 176 90-372 39-241 (242)
132 PF07224 Chlorophyllase: Chlor 98.8 2.2E-08 4.7E-13 82.3 7.2 105 90-203 46-156 (307)
133 PF05990 DUF900: Alpha/beta hy 98.7 1.2E-07 2.6E-12 80.0 9.7 109 90-203 18-136 (233)
134 PF12715 Abhydrolase_7: Abhydr 98.7 1.6E-07 3.6E-12 82.4 9.9 102 90-201 115-257 (390)
135 PF00151 Lipase: Lipase; Inte 98.7 5.6E-09 1.2E-13 92.3 0.7 114 90-204 71-187 (331)
136 PF08840 BAAT_C: BAAT / Acyl-C 98.7 3.5E-07 7.6E-12 76.2 11.3 50 151-204 7-56 (213)
137 KOG2100 Dipeptidyl aminopeptid 98.6 9.8E-07 2.1E-11 86.7 15.5 221 73-374 506-750 (755)
138 PF01674 Lipase_2: Lipase (cla 98.6 1.5E-08 3.3E-13 83.6 2.3 86 91-189 2-95 (219)
139 KOG1553 Predicted alpha/beta h 98.6 2.8E-07 6E-12 78.6 9.1 100 90-202 243-343 (517)
140 PF03583 LIP: Secretory lipase 98.6 4.5E-06 9.8E-11 73.0 16.1 59 312-373 219-283 (290)
141 PF05677 DUF818: Chlamydia CHL 98.5 1.1E-06 2.3E-11 75.6 10.6 110 73-190 120-236 (365)
142 COG4814 Uncharacterized protei 98.5 5E-06 1.1E-10 68.2 13.5 109 90-203 45-175 (288)
143 COG4188 Predicted dienelactone 98.5 1.6E-07 3.5E-12 81.8 4.9 95 90-190 71-180 (365)
144 COG4099 Predicted peptidase [G 98.5 2.8E-06 6E-11 71.3 11.5 122 72-203 169-303 (387)
145 PF03403 PAF-AH_p_II: Platelet 98.5 7.6E-07 1.7E-11 80.6 8.9 106 90-202 100-260 (379)
146 PLN02606 palmitoyl-protein thi 98.4 5.2E-05 1.1E-09 65.0 18.9 104 90-203 26-131 (306)
147 PF00450 Peptidase_S10: Serine 98.4 2.2E-05 4.8E-10 72.9 17.7 123 74-203 23-180 (415)
148 COG3509 LpqC Poly(3-hydroxybut 98.4 2.8E-06 6E-11 71.6 9.8 105 90-203 61-178 (312)
149 KOG2112 Lysophospholipase [Lip 98.4 2.3E-06 4.9E-11 68.5 8.6 105 91-202 4-126 (206)
150 PLN02633 palmitoyl protein thi 98.3 1.8E-05 3.9E-10 67.8 13.9 104 90-203 25-130 (314)
151 KOG2281 Dipeptidyl aminopeptid 98.3 1.5E-05 3.3E-10 73.7 13.8 206 90-371 642-867 (867)
152 PF10340 DUF2424: Protein of u 98.3 0.00021 4.5E-09 63.6 20.0 103 90-202 122-233 (374)
153 PF11339 DUF3141: Protein of u 98.3 0.00017 3.8E-09 65.7 19.7 101 90-202 68-173 (581)
154 COG1075 LipA Predicted acetylt 98.3 2.2E-06 4.8E-11 76.5 7.7 100 90-203 59-163 (336)
155 KOG1551 Uncharacterized conser 98.2 6.9E-06 1.5E-10 67.7 8.8 59 315-373 309-368 (371)
156 PF05057 DUF676: Putative seri 98.2 2.3E-06 4.9E-11 71.6 5.9 90 90-188 4-97 (217)
157 PF12048 DUF3530: Protein of u 98.2 0.00029 6.2E-09 62.2 19.0 119 77-203 76-228 (310)
158 PF05577 Peptidase_S28: Serine 98.1 2.7E-05 5.8E-10 72.7 10.5 91 110-203 49-147 (434)
159 PF04301 DUF452: Protein of un 98.1 0.00012 2.6E-09 60.0 12.7 79 90-204 11-90 (213)
160 COG2936 Predicted acyl esteras 98.1 0.00027 5.9E-09 65.9 16.1 123 73-204 28-159 (563)
161 PF00756 Esterase: Putative es 98.0 1.1E-05 2.3E-10 69.5 6.5 109 90-203 24-149 (251)
162 PF05705 DUF829: Eukaryotic pr 98.0 0.00091 2E-08 57.1 17.9 57 312-368 178-240 (240)
163 COG4782 Uncharacterized protei 98.0 3.1E-05 6.7E-10 67.3 8.2 104 90-203 116-233 (377)
164 KOG3253 Predicted alpha/beta h 97.9 0.00022 4.7E-09 65.9 13.0 43 312-354 304-348 (784)
165 KOG4840 Predicted hydrolases o 97.9 0.00088 1.9E-08 54.1 14.0 105 90-203 36-143 (299)
166 KOG3847 Phospholipase A2 (plat 97.8 0.0002 4.3E-09 60.9 10.1 41 91-137 119-159 (399)
167 PF02450 LCAT: Lecithin:choles 97.8 8.7E-05 1.9E-09 67.9 8.3 86 107-207 66-163 (389)
168 PRK10439 enterobactin/ferric e 97.8 0.00043 9.3E-09 63.6 12.3 112 90-203 209-322 (411)
169 COG3150 Predicted esterase [Ge 97.7 0.00022 4.7E-09 54.9 7.3 87 93-203 2-90 (191)
170 PF08386 Abhydrolase_4: TAP-li 97.6 0.00027 5.8E-09 51.4 7.3 61 312-372 34-95 (103)
171 COG1073 Hydrolases of the alph 97.6 0.00032 6.9E-09 61.7 9.0 68 304-372 225-298 (299)
172 KOG3724 Negative regulator of 97.6 0.00019 4.1E-09 68.3 6.7 107 90-201 89-217 (973)
173 cd00312 Esterase_lipase Estera 97.5 0.00024 5.3E-09 67.6 7.5 107 90-204 95-213 (493)
174 KOG2541 Palmitoyl protein thio 97.5 0.012 2.5E-07 49.4 15.8 102 91-202 24-126 (296)
175 COG1505 Serine proteases of th 97.4 0.00049 1.1E-08 63.8 7.7 124 71-202 401-533 (648)
176 KOG2183 Prolylcarboxypeptidase 97.4 0.00078 1.7E-08 59.6 8.6 105 91-200 81-198 (492)
177 PF11144 DUF2920: Protein of u 97.4 0.015 3.3E-07 52.2 16.4 33 169-201 184-216 (403)
178 PLN03016 sinapoylglucose-malat 97.4 0.077 1.7E-06 49.3 21.7 58 312-370 347-430 (433)
179 PLN02209 serine carboxypeptida 97.4 0.027 5.9E-07 52.2 18.2 58 312-370 351-434 (437)
180 PF02089 Palm_thioest: Palmito 97.2 0.00046 9.9E-09 58.8 4.6 108 90-203 5-115 (279)
181 COG2819 Predicted hydrolase of 97.1 0.0095 2.1E-07 50.3 10.8 37 167-203 135-171 (264)
182 COG2382 Fes Enterochelin ester 97.0 0.011 2.4E-07 50.6 11.1 125 75-203 83-211 (299)
183 PF10142 PhoPQ_related: PhoPQ- 97.0 0.019 4E-07 51.6 12.7 62 306-372 258-321 (367)
184 COG2272 PnbA Carboxylesterase 96.9 0.0023 5E-08 58.4 6.6 106 90-203 94-216 (491)
185 COG2939 Carboxypeptidase C (ca 96.8 0.12 2.6E-06 47.7 16.4 122 77-204 88-236 (498)
186 PF00135 COesterase: Carboxyle 96.8 0.0068 1.5E-07 58.4 9.2 107 90-204 125-245 (535)
187 KOG3101 Esterase D [General fu 96.7 0.025 5.4E-07 45.7 9.9 109 90-203 44-175 (283)
188 KOG1282 Serine carboxypeptidas 96.7 0.56 1.2E-05 43.5 20.0 126 73-204 55-213 (454)
189 PF01764 Lipase_3: Lipase (cla 96.6 0.0036 7.9E-08 48.3 4.9 37 147-189 48-84 (140)
190 cd00741 Lipase Lipase. Lipase 96.6 0.0059 1.3E-07 48.0 6.0 35 168-202 27-65 (153)
191 KOG2369 Lecithin:cholesterol a 96.5 0.0043 9.3E-08 56.3 4.9 88 106-204 124-225 (473)
192 KOG2182 Hydrolytic enzymes of 96.5 0.015 3.2E-07 53.2 8.2 108 90-202 86-205 (514)
193 PF07082 DUF1350: Protein of u 96.4 0.013 2.9E-07 48.9 7.3 105 90-201 17-122 (250)
194 KOG2237 Predicted serine prote 96.4 0.072 1.6E-06 50.3 12.5 106 90-203 470-583 (712)
195 PLN02517 phosphatidylcholine-s 96.3 0.0043 9.2E-08 58.2 4.0 93 106-206 156-265 (642)
196 COG1770 PtrB Protease II [Amin 96.2 0.13 2.8E-06 49.0 12.8 106 90-203 448-561 (682)
197 KOG3967 Uncharacterized conser 96.0 0.065 1.4E-06 43.4 8.9 104 90-201 101-224 (297)
198 PF06441 EHN: Epoxide hydrolas 96.0 0.013 2.9E-07 42.9 4.7 39 71-112 74-112 (112)
199 cd00519 Lipase_3 Lipase (class 95.8 0.015 3.2E-07 49.2 5.0 35 168-202 127-166 (229)
200 COG3946 VirJ Type IV secretory 95.7 0.018 4E-07 51.1 5.1 89 90-191 260-348 (456)
201 COG0627 Predicted esterase [Ge 95.7 0.017 3.7E-07 50.9 4.8 34 170-203 153-186 (316)
202 PLN02454 triacylglycerol lipas 95.7 0.025 5.4E-07 51.2 5.9 19 170-188 229-247 (414)
203 PF11187 DUF2974: Protein of u 95.6 0.034 7.3E-07 46.6 5.9 46 150-202 72-121 (224)
204 PF11288 DUF3089: Protein of u 95.5 0.029 6.3E-07 45.9 5.3 63 123-190 45-116 (207)
205 PF06259 Abhydrolase_8: Alpha/ 95.5 0.053 1.2E-06 43.4 6.4 57 146-203 87-143 (177)
206 PLN02571 triacylglycerol lipas 95.2 0.033 7.1E-07 50.6 5.0 39 147-189 208-246 (413)
207 COG4947 Uncharacterized protei 95.1 0.11 2.4E-06 40.5 6.8 35 168-202 100-134 (227)
208 KOG2521 Uncharacterized conser 95.0 1.2 2.6E-05 39.8 14.0 62 312-373 225-292 (350)
209 PLN02162 triacylglycerol lipas 95.0 0.04 8.6E-07 50.5 5.0 36 147-188 262-297 (475)
210 PLN00413 triacylglycerol lipas 94.6 0.061 1.3E-06 49.5 5.2 35 148-188 269-303 (479)
211 PLN02408 phospholipase A1 94.6 0.059 1.3E-06 48.2 4.9 37 149-189 184-220 (365)
212 PLN02934 triacylglycerol lipas 94.2 0.075 1.6E-06 49.3 4.8 35 148-188 306-340 (515)
213 KOG4372 Predicted alpha/beta h 94.1 0.067 1.5E-06 47.9 4.2 89 90-188 80-169 (405)
214 PF05576 Peptidase_S37: PS-10 94.1 0.046 9.9E-07 49.0 3.2 103 90-203 63-169 (448)
215 PLN02310 triacylglycerol lipas 94.0 0.081 1.8E-06 47.9 4.6 40 147-188 189-228 (405)
216 PLN02324 triacylglycerol lipas 93.9 0.072 1.6E-06 48.3 4.1 37 149-189 199-235 (415)
217 PLN02802 triacylglycerol lipas 93.7 0.11 2.3E-06 48.3 4.8 38 148-189 313-350 (509)
218 PLN03037 lipase class 3 family 93.5 0.12 2.6E-06 48.1 4.9 39 148-188 299-337 (525)
219 KOG1202 Animal-type fatty acid 93.2 0.54 1.2E-05 48.1 8.8 93 90-203 2123-2218(2376)
220 PLN02753 triacylglycerol lipas 93.1 0.15 3.2E-06 47.6 4.8 39 149-188 293-331 (531)
221 PLN02761 lipase class 3 family 93.1 0.11 2.4E-06 48.4 3.9 41 148-188 273-313 (527)
222 PF01083 Cutinase: Cutinase; 92.9 0.16 3.4E-06 41.0 4.2 87 112-202 28-120 (179)
223 PLN02719 triacylglycerol lipas 92.8 0.18 3.8E-06 47.0 4.7 39 149-188 279-317 (518)
224 KOG4569 Predicted lipase [Lipi 92.1 0.24 5.2E-06 44.4 4.8 36 147-188 155-190 (336)
225 PLN02847 triacylglycerol lipas 91.7 0.3 6.4E-06 46.3 4.9 21 168-188 250-270 (633)
226 COG4553 DepA Poly-beta-hydroxy 91.5 8.7 0.00019 33.2 14.7 110 81-204 94-209 (415)
227 PF04083 Abhydro_lipase: Parti 91.3 0.43 9.3E-06 30.9 4.0 19 88-108 41-59 (63)
228 KOG1516 Carboxylesterase and r 91.2 0.61 1.3E-05 45.1 6.8 106 90-203 112-231 (545)
229 COG2830 Uncharacterized protei 90.7 2.1 4.6E-05 33.2 7.7 78 91-204 12-90 (214)
230 PF08237 PE-PPE: PE-PPE domain 89.9 1.4 3E-05 37.0 7.0 63 123-189 2-68 (225)
231 PF05277 DUF726: Protein of un 88.2 1 2.3E-05 40.2 5.3 35 168-202 219-258 (345)
232 PLN02213 sinapoylglucose-malat 88.2 1.5 3.2E-05 39.2 6.3 58 312-370 233-316 (319)
233 PLN02213 sinapoylglucose-malat 87.2 1.8 3.9E-05 38.6 6.3 76 124-202 2-94 (319)
234 KOG4388 Hormone-sensitive lipa 86.7 2.8 6.1E-05 39.7 7.2 101 92-202 398-506 (880)
235 PF09949 DUF2183: Uncharacteri 86.2 4.1 8.9E-05 29.2 6.5 85 105-199 10-97 (100)
236 PF07519 Tannase: Tannase and 85.6 2.4 5.1E-05 40.1 6.5 85 111-204 52-150 (474)
237 KOG2029 Uncharacterized conser 83.2 1.3 2.9E-05 41.9 3.5 22 167-188 524-545 (697)
238 TIGR03712 acc_sec_asp2 accesso 82.5 44 0.00095 31.4 13.6 99 90-202 289-388 (511)
239 KOG4540 Putative lipase essent 82.4 3.1 6.6E-05 35.7 5.1 34 167-202 274-307 (425)
240 COG5153 CVT17 Putative lipase 82.4 3.1 6.6E-05 35.7 5.1 34 167-202 274-307 (425)
241 COG4287 PqaA PhoPQ-activated p 76.1 19 0.00042 32.3 8.1 59 307-370 326-386 (507)
242 PRK12467 peptide synthase; Pro 75.5 13 0.00029 45.2 9.3 96 91-200 3693-3791(3956)
243 PF03283 PAE: Pectinacetyleste 74.9 29 0.00063 31.6 9.4 48 149-201 140-192 (361)
244 PF06850 PHB_depo_C: PHB de-po 70.2 9.4 0.0002 31.0 4.5 59 312-370 134-201 (202)
245 PF07519 Tannase: Tannase and 69.1 17 0.00037 34.5 6.8 63 312-374 353-430 (474)
246 cd01714 ETF_beta The electron 65.0 29 0.00062 28.6 6.7 63 124-200 78-145 (202)
247 PF09994 DUF2235: Uncharacteri 62.0 52 0.0011 28.7 8.1 40 145-189 72-112 (277)
248 PF06792 UPF0261: Uncharacteri 61.2 59 0.0013 29.9 8.3 101 92-200 3-126 (403)
249 PRK02399 hypothetical protein; 59.3 89 0.0019 28.8 9.1 101 92-200 5-128 (406)
250 COG0218 Predicted GTPase [Gene 56.6 13 0.00029 30.3 3.2 55 312-370 135-198 (200)
251 PF10605 3HBOH: 3HB-oligomer h 55.5 18 0.00039 34.8 4.2 34 171-204 287-321 (690)
252 PF00698 Acyl_transf_1: Acyl t 51.3 9.8 0.00021 33.9 1.9 30 153-188 74-103 (318)
253 PF05576 Peptidase_S37: PS-10 51.0 35 0.00075 31.4 5.1 65 301-369 342-412 (448)
254 TIGR02683 upstrm_HI1419 probab 51.0 30 0.00066 24.4 4.0 30 65-100 47-77 (95)
255 TIGR03131 malonate_mdcH malona 50.6 20 0.00043 31.5 3.7 30 153-188 66-95 (295)
256 smart00827 PKS_AT Acyl transfe 50.2 19 0.00041 31.6 3.5 29 154-188 73-101 (298)
257 PF12242 Eno-Rase_NADH_b: NAD( 46.7 46 0.001 22.4 3.9 23 168-190 39-61 (78)
258 COG3933 Transcriptional antite 45.2 1.3E+02 0.0027 28.2 7.7 72 92-186 111-182 (470)
259 PF02590 SPOUT_MTase: Predicte 45.1 28 0.00061 27.3 3.3 60 123-202 67-126 (155)
260 PRK05579 bifunctional phosphop 43.7 2.4E+02 0.0053 26.2 9.6 99 90-202 116-236 (399)
261 PF11713 Peptidase_C80: Peptid 43.4 13 0.00028 29.2 1.2 48 132-181 62-116 (157)
262 COG3887 Predicted signaling pr 43.2 1.5E+02 0.0032 28.9 8.0 103 90-203 258-377 (655)
263 TIGR00521 coaBC_dfp phosphopan 42.7 2.8E+02 0.006 25.7 9.8 99 91-201 113-232 (390)
264 COG1576 Uncharacterized conser 41.5 71 0.0015 24.9 4.9 59 110-188 59-117 (155)
265 COG0529 CysC Adenylylsulfate k 40.8 57 0.0012 26.3 4.3 58 90-153 22-81 (197)
266 PRK10279 hypothetical protein; 40.0 36 0.00078 30.1 3.6 23 168-190 32-54 (300)
267 cd06896 PX_PI3K_C2_gamma The p 39.6 57 0.0012 23.2 3.7 46 330-375 39-85 (101)
268 KOG2385 Uncharacterized conser 39.4 54 0.0012 31.1 4.6 35 168-202 446-485 (633)
269 PRK00103 rRNA large subunit me 39.0 86 0.0019 24.7 5.2 49 123-185 67-115 (157)
270 cd07225 Pat_PNPLA6_PNPLA7 Pata 37.9 40 0.00086 29.9 3.5 22 168-189 42-63 (306)
271 TIGR00128 fabD malonyl CoA-acy 37.4 41 0.00088 29.3 3.6 21 168-188 82-102 (290)
272 TIGR03709 PPK2_rel_1 polyphosp 37.1 42 0.00091 29.0 3.4 74 90-183 55-128 (264)
273 cd07198 Patatin Patatin-like p 36.8 47 0.001 26.4 3.5 22 168-189 25-46 (172)
274 cd07227 Pat_Fungal_NTE1 Fungal 35.6 50 0.0011 28.7 3.7 22 168-189 37-58 (269)
275 PF05973 Gp49: Phage derived p 34.2 54 0.0012 22.8 3.1 32 63-100 39-72 (91)
276 TIGR03707 PPK2_P_aer polyphosp 34.2 52 0.0011 27.8 3.5 74 90-183 30-103 (230)
277 COG1752 RssA Predicted esteras 34.1 50 0.0011 29.2 3.6 31 153-189 29-59 (306)
278 KOG2872 Uroporphyrinogen decar 33.3 1.4E+02 0.0031 26.0 5.8 70 90-177 252-336 (359)
279 cd07207 Pat_ExoU_VipD_like Exo 32.7 58 0.0013 26.3 3.6 22 168-189 26-47 (194)
280 KOG1200 Mitochondrial/plastidi 32.6 2.2E+02 0.0047 23.6 6.4 33 92-132 15-47 (256)
281 TIGR02764 spore_ybaN_pdaB poly 32.1 43 0.00093 27.1 2.7 33 92-130 153-188 (191)
282 TIGR02816 pfaB_fam PfaB family 32.0 53 0.0011 31.7 3.5 30 154-189 255-285 (538)
283 PF03976 PPK2: Polyphosphate k 31.6 29 0.00062 29.3 1.5 74 90-184 30-104 (228)
284 cd07210 Pat_hypo_W_succinogene 30.5 77 0.0017 26.5 4.0 21 169-189 28-48 (221)
285 PF01583 APS_kinase: Adenylyls 30.3 85 0.0019 24.6 3.9 36 91-130 2-37 (156)
286 KOG1252 Cystathionine beta-syn 29.9 4.2E+02 0.0091 23.9 9.6 35 169-203 303-339 (362)
287 PLN02748 tRNA dimethylallyltra 29.6 2.4E+02 0.0052 26.8 7.3 80 90-180 21-123 (468)
288 PF14253 AbiH: Bacteriophage a 29.3 47 0.001 28.6 2.6 15 168-182 234-248 (270)
289 PF06309 Torsin: Torsin; Inte 28.6 1.3E+02 0.0029 22.6 4.5 58 315-372 55-117 (127)
290 cd03818 GT1_ExpC_like This fam 28.4 1E+02 0.0022 28.3 4.8 38 93-138 2-39 (396)
291 PF08386 Abhydrolase_4: TAP-li 28.0 1.5E+02 0.0032 21.2 4.6 60 90-159 34-93 (103)
292 cd07209 Pat_hypo_Ecoli_Z1214_l 27.9 79 0.0017 26.3 3.6 24 168-191 25-48 (215)
293 PF06289 FlbD: Flagellar prote 27.9 96 0.0021 19.8 3.1 35 336-371 23-58 (60)
294 PF13709 DUF4159: Domain of un 27.7 1.6E+02 0.0035 24.3 5.3 40 312-351 53-92 (207)
295 COG2230 Cfa Cyclopropane fatty 27.6 1.5E+02 0.0034 25.9 5.3 48 148-199 56-103 (283)
296 cd08769 DAP_dppA_2 Peptidase M 27.2 2.5E+02 0.0055 24.4 6.5 54 312-371 147-203 (270)
297 TIGR02873 spore_ylxY probable 26.9 75 0.0016 27.5 3.4 33 92-130 232-264 (268)
298 COG1448 TyrB Aspartate/tyrosin 26.8 5E+02 0.011 23.9 8.3 87 91-202 172-263 (396)
299 PLN02661 Putative thiazole syn 26.2 1.3E+02 0.0028 27.4 4.7 32 168-201 92-123 (357)
300 PF06309 Torsin: Torsin; Inte 25.6 63 0.0014 24.3 2.3 26 90-117 52-79 (127)
301 TIGR02884 spore_pdaA delta-lac 25.6 82 0.0018 26.4 3.3 33 92-130 188-221 (224)
302 cd07228 Pat_NTE_like_bacteria 24.6 1.1E+02 0.0024 24.4 3.8 23 168-190 27-49 (175)
303 COG0324 MiaA tRNA delta(2)-iso 24.4 3.3E+02 0.0072 24.2 6.8 78 90-178 2-102 (308)
304 PF08484 Methyltransf_14: C-me 24.0 90 0.0019 24.6 3.0 52 147-202 51-102 (160)
305 cd07205 Pat_PNPLA6_PNPLA7_NTE1 24.0 1.1E+02 0.0025 24.2 3.8 21 169-189 28-48 (175)
306 PLN02752 [acyl-carrier protein 23.6 1.1E+02 0.0024 27.6 4.0 19 170-188 125-143 (343)
307 COG3727 Vsr DNA G:T-mismatch r 23.4 2.5E+02 0.0053 21.3 4.9 15 111-129 100-114 (150)
308 COG1506 DAP2 Dipeptidyl aminop 22.3 1.9E+02 0.0042 28.7 5.6 45 90-138 551-598 (620)
309 COG3673 Uncharacterized conser 22.1 5.9E+02 0.013 22.9 7.9 100 90-201 31-150 (423)
310 PF00326 Peptidase_S9: Prolyl 22.1 92 0.002 25.5 3.0 64 90-159 144-208 (213)
311 COG1598 Predicted nuclease of 21.6 2.2E+02 0.0047 18.9 4.1 29 123-156 15-43 (73)
312 cd07212 Pat_PNPLA9 Patatin-lik 21.5 1.4E+02 0.003 26.6 4.1 18 171-188 34-51 (312)
313 COG4850 Uncharacterized conser 21.2 1.6E+02 0.0035 26.2 4.2 97 92-202 215-313 (373)
314 PF05724 TPMT: Thiopurine S-me 21.1 1.2E+02 0.0026 25.3 3.4 29 92-131 39-67 (218)
315 cd01985 ETF The electron trans 21.0 2.5E+02 0.0054 22.4 5.2 62 125-200 62-125 (181)
316 TIGR00246 tRNA_RlmH_YbeA rRNA 20.7 2.1E+02 0.0046 22.4 4.5 48 124-186 66-113 (153)
317 cd07230 Pat_TGL4-5_like Triacy 20.4 54 0.0012 30.6 1.3 26 169-194 101-126 (421)
318 cd07208 Pat_hypo_Ecoli_yjju_li 20.3 1.4E+02 0.0029 25.8 3.8 23 170-192 28-50 (266)
319 PRK13533 7-cyano-7-deazaguanin 20.2 6.3E+02 0.014 24.2 8.2 79 93-188 161-239 (487)
320 COG0746 MobA Molybdopterin-gua 20.1 4.8E+02 0.011 21.2 7.5 70 301-372 77-151 (192)
321 PHA02114 hypothetical protein 20.1 1.3E+02 0.0029 21.2 2.8 32 92-129 84-115 (127)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=4.2e-37 Score=271.67 Aligned_cols=276 Identities=19% Similarity=0.300 Sum_probs=188.1
Q ss_pred ccceEEeecCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-
Q 017180 63 TGNWQWKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK- 141 (376)
Q Consensus 63 ~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~- 141 (376)
.+++.+. |.+++|...|++ +++|||+||++ ++...|+.+++.|++ .|+|+++|+||||.|+.+.
T Consensus 10 ~~~~~~~----~~~i~y~~~G~~----~~~vlllHG~~--~~~~~w~~~~~~L~~-----~~~vi~~DlpG~G~S~~~~~ 74 (294)
T PLN02824 10 TRTWRWK----GYNIRYQRAGTS----GPALVLVHGFG--GNADHWRKNTPVLAK-----SHRVYAIDLLGYGYSDKPNP 74 (294)
T ss_pred CceEEEc----CeEEEEEEcCCC----CCeEEEECCCC--CChhHHHHHHHHHHh-----CCeEEEEcCCCCCCCCCCcc
Confidence 4455665 899999998853 67899999999 999999999999998 6899999999999998653
Q ss_pred ------CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCC
Q 017180 142 ------MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRD 215 (376)
Q Consensus 142 ------~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~ 215 (376)
..++++++++++.+++++++ .++++++||||||.+++.+|.++|++|+++|++++...+. .. ....
T Consensus 75 ~~~~~~~~~~~~~~a~~l~~~l~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~-~~-~~~~ 146 (294)
T PLN02824 75 RSAPPNSFYTFETWGEQLNDFCSDVV------GDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGL-HI-KKQP 146 (294)
T ss_pred ccccccccCCHHHHHHHHHHHHHHhc------CCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccc-cc-cccc
Confidence 36899999999999999997 6899999999999999999999999999999999753111 00 0000
Q ss_pred CchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCC
Q 017180 216 SSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDP 295 (376)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (376)
.........+...+.........+... .....++..+. ..+.+.....++..+.+............+..+... ...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 223 (294)
T PLN02824 147 WLGRPFIKAFQNLLRETAVGKAFFKSV-ATPETVKNILC-QCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISY-SGG 223 (294)
T ss_pred hhhhHHHHHHHHHHhchhHHHHHHHhh-cCHHHHHHHHH-HhccChhhccHHHHHHHHhccCCchHHHHHHHHhcc-ccc
Confidence 000111111111111111111111111 11222222222 223223334444444433221111111112222211 111
Q ss_pred CCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 296 VNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 296 ~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
....+.++++ ++|+|+|+|++|.+++.+..+.+.+..+++++++++++ |++++|+|+++++.|.+|+++
T Consensus 224 ----~~~~~~l~~i--~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 224 ----PLPEELLPAV--KCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred ----cchHHHHhhc--CCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 0134567888 99999999999999999999998888888999999998 999999999999999999976
No 2
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.1e-36 Score=275.01 Aligned_cols=283 Identities=18% Similarity=0.309 Sum_probs=189.0
Q ss_pred CCccceEEeecCCce-eEEEEecccCCC-CCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC
Q 017180 61 SKTGNWQWKFKENSI-NIYYEKHERESP-DPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD 138 (376)
Q Consensus 61 ~~~~~~~~~~~~~g~-~l~y~~~g~~~~-~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~ 138 (376)
...+++.|+ |. +++|.+.|++.. ..+|+|||+||++ ++...|.+++..|.+ +|+|+++|+||||.|+
T Consensus 61 ~~~~~~~~~----g~~~i~Y~~~G~g~~~~~gp~lvllHG~~--~~~~~w~~~~~~L~~-----~~~via~Dl~G~G~S~ 129 (360)
T PLN02679 61 ERCKKWKWK----GEYSINYLVKGSPEVTSSGPPVLLVHGFG--ASIPHWRRNIGVLAK-----NYTVYAIDLLGFGASD 129 (360)
T ss_pred ccCceEEEC----CceeEEEEEecCcccCCCCCeEEEECCCC--CCHHHHHHHHHHHhc-----CCEEEEECCCCCCCCC
Confidence 345667776 66 999999987410 0158999999999 999999999999988 8999999999999998
Q ss_pred CCC-CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH-hCCCCcceEEEeccCCCCCCCcccCCCC
Q 017180 139 RPK-MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK-KNLVKPTAIAAVAPTWAGPLPIVFGRDS 216 (376)
Q Consensus 139 ~~~-~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~-~~p~~v~~lvl~~p~~~~~~~~~~~~~~ 216 (376)
.+. ..++.+++++++.+++++++ .++++|+||||||.+++.++. .+|++|+++|++++........... .
T Consensus 130 ~~~~~~~~~~~~a~~l~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~--~ 201 (360)
T PLN02679 130 KPPGFSYTMETWAELILDFLEEVV------QKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVD--D 201 (360)
T ss_pred CCCCccccHHHHHHHHHHHHHHhc------CCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccc--h
Confidence 663 47899999999999999987 688999999999999999887 5799999999998743111000000 0
Q ss_pred chhh----hhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhcc
Q 017180 217 SMET----RYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGL 292 (376)
Q Consensus 217 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (376)
.... ....+......+.....++... .....++..+. ..+.+....+++..+.+............+..+....
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (360)
T PLN02679 202 WRIKLLLPLLWLIDFLLKQRGIASALFNRV-KQRDNLKNILL-SVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGP 279 (360)
T ss_pred HHHhhhcchHHHHHHHhhchhhHHHHHHHh-cCHHHHHHHHH-HhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcC
Confidence 0000 0000011111111111111111 11223332222 2333334455555554433322222222223222221
Q ss_pred CCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHH-----HHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHH
Q 017180 293 LDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAE-----MEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQ 366 (376)
Q Consensus 293 ~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~ 366 (376)
.... ..+.++++ ++|||+|+|++|.++|.+. .+.+.+..+++++++++++ |++++|+|+++++.|.+
T Consensus 280 ~~~~-----~~~~l~~i--~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~ 352 (360)
T PLN02679 280 PGPN-----PIKLIPRI--SLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLP 352 (360)
T ss_pred CCCC-----HHHHhhhc--CCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHH
Confidence 1111 34567788 9999999999999998763 3456677899999999999 99999999999999999
Q ss_pred HHHhh
Q 017180 367 FLQQT 371 (376)
Q Consensus 367 fl~~~ 371 (376)
||.+.
T Consensus 353 FL~~~ 357 (360)
T PLN02679 353 WLAQL 357 (360)
T ss_pred HHHhc
Confidence 99875
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=8.1e-35 Score=257.22 Aligned_cols=269 Identities=16% Similarity=0.170 Sum_probs=180.0
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 152 (376)
+|.+++|...|+ +++|||+||++ ++...|+.+++.|.+ .++||++|+||||.|+.+...++.+++++|
T Consensus 15 ~g~~i~y~~~G~-----g~~vvllHG~~--~~~~~w~~~~~~L~~-----~~~via~D~~G~G~S~~~~~~~~~~~~a~d 82 (295)
T PRK03592 15 LGSRMAYIETGE-----GDPIVFLHGNP--TSSYLWRNIIPHLAG-----LGRCLAPDLIGMGASDKPDIDYTFADHARY 82 (295)
T ss_pred CCEEEEEEEeCC-----CCEEEEECCCC--CCHHHHHHHHHHHhh-----CCEEEEEcCCCCCCCCCCCCCCCHHHHHHH
Confidence 388999999985 67999999999 999999999999998 579999999999999977677999999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP 232 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
+.+++++++ .++++++||||||.+|+.+|.++|++|+++|++++... +. ..... ......... .+..+
T Consensus 83 l~~ll~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~-~~-~~~~~---~~~~~~~~~-~~~~~ 150 (295)
T PRK03592 83 LDAWFDALG------LDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVR-PM-TWDDF---PPAVRELFQ-ALRSP 150 (295)
T ss_pred HHHHHHHhC------CCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCC-Cc-chhhc---chhHHHHHH-HHhCc
Confidence 999999997 68899999999999999999999999999999997321 10 00000 000111111 11111
Q ss_pred chhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCC--C----CcHHHHHHHH
Q 017180 233 GVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDP--V----NSREEFLQLF 306 (376)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~ 306 (376)
.....+.. .....+...+. ... ....+++....+......+........+....... . .........+
T Consensus 151 ~~~~~~~~---~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 224 (295)
T PRK03592 151 GEGEEMVL---EENVFIERVLP-GSI--LRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWL 224 (295)
T ss_pred cccccccc---chhhHHhhccc-Ccc--cccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHh
Confidence 11110000 00111121111 111 11344444444443333222222222221111000 0 0011234556
Q ss_pred hcccCCCcEEEEEeCCCCCCCH-HHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 307 ADLEGKLPLLVVSTEGSPRRSK-AEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 307 ~~i~~~~Pvlii~G~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
.++ ++|+|+|+|++|.++++ ...+.+.+..+++++++++++ |++++|+|+++++.|.+|+++...
T Consensus 225 ~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 225 ATS--DVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred ccC--CCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 778 99999999999999944 444444566788999999998 999999999999999999998743
No 4
>PLN02578 hydrolase
Probab=100.00 E-value=2e-34 Score=260.04 Aligned_cols=279 Identities=20% Similarity=0.264 Sum_probs=187.6
Q ss_pred ccceEEeecCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC
Q 017180 63 TGNWQWKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM 142 (376)
Q Consensus 63 ~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~ 142 (376)
...+.|+ |.+++|...|+ +++|||+||++ ++...|..+++.|++ +|+|+++|+||||.|+++..
T Consensus 68 ~~~~~~~----~~~i~Y~~~g~-----g~~vvliHG~~--~~~~~w~~~~~~l~~-----~~~v~~~D~~G~G~S~~~~~ 131 (354)
T PLN02578 68 YNFWTWR----GHKIHYVVQGE-----GLPIVLIHGFG--ASAFHWRYNIPELAK-----KYKVYALDLLGFGWSDKALI 131 (354)
T ss_pred ceEEEEC----CEEEEEEEcCC-----CCeEEEECCCC--CCHHHHHHHHHHHhc-----CCEEEEECCCCCCCCCCccc
Confidence 3456666 88999999885 67899999999 999999999999988 79999999999999998777
Q ss_pred CCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCC------C
Q 017180 143 DYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRD------S 216 (376)
Q Consensus 143 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~------~ 216 (376)
.|+.+.+++++.++++++. .++++++|||+||.+++.+|.++|++|+++|++++......+...... .
T Consensus 132 ~~~~~~~a~~l~~~i~~~~------~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~ 205 (354)
T PLN02578 132 EYDAMVWRDQVADFVKEVV------KEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEET 205 (354)
T ss_pred ccCHHHHHHHHHHHHHHhc------cCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccc
Confidence 8999999999999999986 688999999999999999999999999999999875311110000000 0
Q ss_pred chhh-hhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCC
Q 017180 217 SMET-RYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDP 295 (376)
Q Consensus 217 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (376)
.... ............ .....+... ..+..++. .....+.+....++...+........+.....+...+......
T Consensus 206 ~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (354)
T PLN02578 206 VLTRFVVKPLKEWFQRV-VLGFLFWQA-KQPSRIES-VLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFN 282 (354)
T ss_pred hhhHHHhHHHHHHHHHH-HHHHHHHHh-cCHHHHHH-HHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcC
Confidence 0000 000000000000 000000000 11222222 1222333333444444444433333333322222222211100
Q ss_pred CCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCCCCCCCCChHHHHHHHHHHHH
Q 017180 296 VNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 296 ~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~ 369 (376)
. ......+.+.++ ++|+++|+|++|.+++.+..+.+.+..++.++++++.+|++++|+|+++++.|.+|++
T Consensus 283 ~-~~~~~~~~l~~i--~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 283 Q-SRYTLDSLLSKL--SCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNLQAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred C-CCCCHHHHhhcC--CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCccccCHHHHHHHHHHHHh
Confidence 0 001145667888 9999999999999999999999999999999999954499999999999999999986
No 5
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=9e-35 Score=254.32 Aligned_cols=259 Identities=14% Similarity=0.131 Sum_probs=174.5
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK 151 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 151 (376)
.+|.+++|...+.++. +++|||+||++ ++...|..+++.|.+ +|+||++|+||||.|+.+...++.+.+++
T Consensus 9 ~~~~~~~~~~~~~~~~--~~plvllHG~~--~~~~~w~~~~~~L~~-----~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~ 79 (276)
T TIGR02240 9 LDGQSIRTAVRPGKEG--LTPLLIFNGIG--ANLELVFPFIEALDP-----DLEVIAFDVPGVGGSSTPRHPYRFPGLAK 79 (276)
T ss_pred cCCcEEEEEEecCCCC--CCcEEEEeCCC--cchHHHHHHHHHhcc-----CceEEEECCCCCCCCCCCCCcCcHHHHHH
Confidence 3488899977532221 47899999999 999999999999988 79999999999999997767789999999
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
++.+++++++ .++++||||||||.+++.+|.++|++|+++|++++....... ... ...... . ..
T Consensus 80 ~~~~~i~~l~------~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~----~~~~~~---~-~~ 143 (276)
T TIGR02240 80 LAARMLDYLD------YGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMV--PGK----PKVLMM---M-AS 143 (276)
T ss_pred HHHHHHHHhC------cCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccC--CCc----hhHHHH---h-cC
Confidence 9999999996 678999999999999999999999999999999985321000 000 000000 0 00
Q ss_pred CchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccC
Q 017180 232 PGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEG 311 (376)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 311 (376)
. ... ...... ..... ..+.......++........................ .... ..+.++++
T Consensus 144 ~--~~~-~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~l~~i-- 206 (276)
T TIGR02240 144 P--RRY-IQPSHG-IHIAP-----DIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAG-LGWT-----SIHWLHKI-- 206 (276)
T ss_pred c--hhh-hccccc-cchhh-----hhccceeeccchhhhhhhhhcccCCCchHHHHHHHH-cCCc-----hhhHhhcC--
Confidence 0 000 000000 00000 000000001111111111111111111111111111 1111 23457788
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCCCCCCCCChHHHHHHHHHHHHhhc
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
++|+|+|+|++|++++++..+++.+..+++++++++++|++++|+|+++++.|.+|+.+..
T Consensus 207 ~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~gH~~~~e~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 207 QQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDDGHLFLITRAEAVAPIIMKFLAEER 267 (276)
T ss_pred CCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcCCCchhhccHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999986799999999999999999998764
No 6
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-33 Score=237.80 Aligned_cols=282 Identities=17% Similarity=0.176 Sum_probs=187.1
Q ss_pred CccceEEeecCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC
Q 017180 62 KTGNWQWKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK 141 (376)
Q Consensus 62 ~~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~ 141 (376)
..++.+++ |++++|.+.|.++ +|.|+|+||++ .++..|+.++..|+.+ ||+|+|+|+||||.|+.|.
T Consensus 23 ~hk~~~~~----gI~~h~~e~g~~~---gP~illlHGfP--e~wyswr~q~~~la~~----~~rviA~DlrGyG~Sd~P~ 89 (322)
T KOG4178|consen 23 SHKFVTYK----GIRLHYVEGGPGD---GPIVLLLHGFP--ESWYSWRHQIPGLASR----GYRVIAPDLRGYGFSDAPP 89 (322)
T ss_pred ceeeEEEc----cEEEEEEeecCCC---CCEEEEEccCC--ccchhhhhhhhhhhhc----ceEEEecCCCCCCCCCCCC
Confidence 34455555 7999999999876 89999999999 9999999999999997 8999999999999999665
Q ss_pred --CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchh
Q 017180 142 --MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSME 219 (376)
Q Consensus 142 --~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~ 219 (376)
..|++..++.|+..++++++ .++++++||+||+++|..+|..+|++|+++|.++.... .|..-.......
T Consensus 90 ~~~~Yt~~~l~~di~~lld~Lg------~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~--~p~~~~~~~~~~ 161 (322)
T KOG4178|consen 90 HISEYTIDELVGDIVALLDHLG------LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP--NPKLKPLDSSKA 161 (322)
T ss_pred CcceeeHHHHHHHHHHHHHHhc------cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC--Ccccchhhhhcc
Confidence 58999999999999999998 89999999999999999999999999999999986432 111100000000
Q ss_pred hhhH-HHHhhhccCchhhHHhhhhhccHHHHHHHHHhccc----C------CCCCCChHHHHHHHHHHhccCCCchhHHH
Q 017180 220 TRYG-LLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVY----S------NPDNVTPGIVESRYALTKRKGARYVPAAF 288 (376)
Q Consensus 220 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (376)
.... +.--.+..+......+... ..+.....+..+... . .+...+++.++.+.......+ ......+
T Consensus 162 ~f~~~~y~~~fQ~~~~~E~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g-~~gplNy 239 (322)
T KOG4178|consen 162 IFGKSYYICLFQEPGKPETELSKD-DTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDG-FTGPLNY 239 (322)
T ss_pred ccCccceeEeccccCcchhhhccc-hhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhcccccc-ccccchh
Confidence 0000 0000111222222211111 001111111111111 0 011244555555554443222 2222222
Q ss_pred hhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHH-HHHHHhcccCCc-eEEEeCCC-CCCCCCChHHHHHHHH
Q 017180 289 LTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKA-EMEALKGAKGVT-KFVEVPGA-LLPQEEYPAMVAQELY 365 (376)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~-~~~~~~~~-H~~~~e~pe~~~~~i~ 365 (376)
...+.. ..+...-.+.++ ++|+++|+|+.|.+.+.. ..+.+++..++. +.++++++ |+++.|+|++++++|.
T Consensus 240 yrn~~r---~w~a~~~~~~~i--~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~ 314 (322)
T KOG4178|consen 240 YRNFRR---NWEAAPWALAKI--TIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAIL 314 (322)
T ss_pred hHHHhh---Cchhcccccccc--ccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHH
Confidence 111111 000123345667 999999999999988765 455556666665 67888998 9999999999999999
Q ss_pred HHHHhh
Q 017180 366 QFLQQT 371 (376)
Q Consensus 366 ~fl~~~ 371 (376)
+|+++.
T Consensus 315 ~f~~~~ 320 (322)
T KOG4178|consen 315 GFINSF 320 (322)
T ss_pred HHHHhh
Confidence 999875
No 7
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=4.7e-33 Score=246.63 Aligned_cols=257 Identities=12% Similarity=0.138 Sum_probs=169.2
Q ss_pred eeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHHHH
Q 017180 75 INIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVMEKF 152 (376)
Q Consensus 75 ~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~~~ 152 (376)
.+++|.+.|+++ +++|||+||++ ++...|..+++.|.+. ||+|+++|+||||.|+.+. ..++.++++++
T Consensus 34 ~~i~y~~~G~~~---~~~lvliHG~~--~~~~~w~~~~~~L~~~----gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~ 104 (302)
T PRK00870 34 LRMHYVDEGPAD---GPPVLLLHGEP--SWSYLYRKMIPILAAA----GHRVIAPDLIGFGRSDKPTRREDYTYARHVEW 104 (302)
T ss_pred EEEEEEecCCCC---CCEEEEECCCC--CchhhHHHHHHHHHhC----CCEEEEECCCCCCCCCCCCCcccCCHHHHHHH
Confidence 689999998754 68999999999 9999999999999864 8999999999999998654 46899999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP 232 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
+.+++++++ .++++++||||||.+++.+|.++|++|+++|++++........ .......+.......+
T Consensus 105 l~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 172 (302)
T PRK00870 105 MRSWFEQLD------LTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGP------MPDAFWAWRAFSQYSP 172 (302)
T ss_pred HHHHHHHcC------CCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCcccc------chHHHhhhhcccccCc
Confidence 999999987 6789999999999999999999999999999998742110000 0000000000000000
Q ss_pred chhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCc---hhHHHhhcc-CCCC-CcHHHHHHHHh
Q 017180 233 GVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARY---VPAAFLTGL-LDPV-NSREEFLQLFA 307 (376)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~-~~~~~~~~~~~ 307 (376)
. ..+...+... . .....++....+........... ......... .... .........+.
T Consensus 173 ~-------------~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 236 (302)
T PRK00870 173 V-------------LPVGRLVNGG-T--VRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLE 236 (302)
T ss_pred h-------------hhHHHHhhcc-c--cccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhh
Confidence 0 0000000000 0 00122222222111000000000 000000000 0000 01111234567
Q ss_pred cccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCce---EEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 308 DLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTK---FVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 308 ~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
++ ++|+++|+|++|.+++.+. +.+.+..++++ +++++++ |++++|+|+++++.|.+||++.
T Consensus 237 ~i--~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 237 RW--DKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred cC--CCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 88 9999999999999999766 77888888766 8899998 9999999999999999999764
No 8
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=6.3e-33 Score=243.18 Aligned_cols=260 Identities=15% Similarity=0.190 Sum_probs=166.7
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKF 152 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~~~~~ 152 (376)
|.+++|...|. +++|||+||++ .+...|+.+++.|.+ +|+|+++|+||||.|+.+. ..++.++++++
T Consensus 23 ~~~i~y~~~G~-----~~~iv~lHG~~--~~~~~~~~~~~~l~~-----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 90 (286)
T PRK03204 23 RGRIHYIDEGT-----GPPILLCHGNP--TWSFLYRDIIVALRD-----RFRCVAPDYLGFGLSERPSGFGYQIDEHARV 90 (286)
T ss_pred CcEEEEEECCC-----CCEEEEECCCC--ccHHHHHHHHHHHhC-----CcEEEEECCCCCCCCCCCCccccCHHHHHHH
Confidence 78999999885 67899999999 999999999999988 8999999999999999654 46889999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP 232 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
+.+++++++ .++++++||||||.+++.++..+|++|+++|++++... +. .. .. ...........
T Consensus 91 ~~~~~~~~~------~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~---~~----~~-~~--~~~~~~~~~~~ 154 (286)
T PRK03204 91 IGEFVDHLG------LDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFW---PA----DT-LA--MKAFSRVMSSP 154 (286)
T ss_pred HHHHHHHhC------CCCEEEEEECccHHHHHHHHHhChhheeEEEEECcccc---CC----Cc-hh--HHHHHHHhccc
Confidence 999999987 67899999999999999999999999999999876421 00 00 00 00000011000
Q ss_pred chhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCC
Q 017180 233 GVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGK 312 (376)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 312 (376)
.....+.. ........+..... ...+++....+......+......................+...+.+..++
T Consensus 155 ~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T PRK03204 155 PVQYAILR----RNFFVERLIPAGTE---HRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGT 227 (286)
T ss_pred cchhhhhh----hhHHHHHhcccccc---CCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCC
Confidence 00000000 00111111111100 122233222222111111111111110000000000001111112111117
Q ss_pred CcEEEEEeCCCCCCCH-HHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHH
Q 017180 313 LPLLVVSTEGSPRRSK-AEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFL 368 (376)
Q Consensus 313 ~Pvlii~G~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl 368 (376)
+||++|+|++|.++++ ...+.+.+..++.++++++++ |++++|+|+++++.|.+||
T Consensus 228 ~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 228 KPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred CCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 8999999999998754 467888899999999999999 9999999999999999997
No 9
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=8.3e-32 Score=241.97 Aligned_cols=267 Identities=16% Similarity=0.188 Sum_probs=178.0
Q ss_pred EeecCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC----C
Q 017180 68 WKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM----D 143 (376)
Q Consensus 68 ~~~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~----~ 143 (376)
.....+|++++|.+.|+++ +++|||+||++ .+...|+.+++.|++ +|+||++|+||||.|+.+.. .
T Consensus 108 ~~~~~~~~~~~y~~~G~~~---~~~ivllHG~~--~~~~~w~~~~~~L~~-----~~~Via~DlpG~G~S~~p~~~~~~~ 177 (383)
T PLN03084 108 SQASSDLFRWFCVESGSNN---NPPVLLIHGFP--SQAYSYRKVLPVLSK-----NYHAIAFDWLGFGFSDKPQPGYGFN 177 (383)
T ss_pred eEEcCCceEEEEEecCCCC---CCeEEEECCCC--CCHHHHHHHHHHHhc-----CCEEEEECCCCCCCCCCCccccccc
Confidence 3456779999999999754 68999999999 999999999999988 89999999999999996642 6
Q ss_pred CCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhH
Q 017180 144 YNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYG 223 (376)
Q Consensus 144 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~ 223 (376)
++.+++++++.+++++++ .++++|+|||+||.+++.+|.++|++|+++|+++|...... . . ......
T Consensus 178 ys~~~~a~~l~~~i~~l~------~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~----~--~-~p~~l~ 244 (383)
T PLN03084 178 YTLDEYVSSLESLIDELK------SDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEH----A--K-LPSTLS 244 (383)
T ss_pred CCHHHHHHHHHHHHHHhC------CCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCcccc----c--c-chHHHH
Confidence 899999999999999997 67899999999999999999999999999999998531100 0 0 000000
Q ss_pred HHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCc-hhHHHhhccCCCC-CcHHH
Q 017180 224 LLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARY-VPAAFLTGLLDPV-NSREE 301 (376)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~ 301 (376)
.+... ..... +... ........+.. ......+++....+.......+... ....+........ ...++
T Consensus 245 ~~~~~----l~~~~-~~~~--~~~~~~~~~~~---~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~ 314 (383)
T PLN03084 245 EFSNF----LLGEI-FSQD--PLRASDKALTS---CGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEE 314 (383)
T ss_pred HHHHH----Hhhhh-hhcc--hHHHHhhhhcc---cCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHH
Confidence 00000 00000 0000 00000001110 1112233343333333322222111 1111111111100 01111
Q ss_pred HHHHH--hcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 302 FLQLF--ADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 302 ~~~~~--~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
+...+ .++ ++|+++|+|++|.+++.+..+.+.+. ++.++++++++ |++++|+|+++++.|.+||.+
T Consensus 315 l~~~l~~~~i--~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 315 MRSILTDKNW--KTPITVCWGLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred HHhhhccccC--CCCEEEEeeCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 22222 356 89999999999999999988888776 48899999998 999999999999999999864
No 10
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=9.7e-32 Score=235.71 Aligned_cols=263 Identities=14% Similarity=0.162 Sum_probs=173.4
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC-CCCHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM-DYNADVMEK 151 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~-~~~~~~~~~ 151 (376)
+|.+++|.+.|+.. +++|||+||++ ++...|+.+++.|++ +|+|+++|+||||.|+.+.. .++.+.+++
T Consensus 14 ~~~~~~~~~~g~~~---~~~vv~~hG~~--~~~~~~~~~~~~l~~-----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 83 (278)
T TIGR03056 14 GPFHWHVQDMGPTA---GPLLLLLHGTG--ASTHSWRDLMPPLAR-----SFRVVAPDLPGHGFTRAPFRFRFTLPSMAE 83 (278)
T ss_pred CCEEEEEEecCCCC---CCeEEEEcCCC--CCHHHHHHHHHHHhh-----CcEEEeecCCCCCCCCCccccCCCHHHHHH
Confidence 38899999988754 68999999999 999999999999988 89999999999999986544 789999999
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
++.+++++++ .++++|+||||||.+++.+|.++|++++++|++++.... ........ .. .........
T Consensus 84 ~l~~~i~~~~------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~-~~~~~~~~--~~---~~~~~~~~~ 151 (278)
T TIGR03056 84 DLSALCAAEG------LSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMP-FEGMAGTL--FP---YMARVLACN 151 (278)
T ss_pred HHHHHHHHcC------CCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccc-cccccccc--cc---hhhHhhhhc
Confidence 9999999986 678999999999999999999999999999999874311 11000000 00 000000001
Q ss_pred CchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccC
Q 017180 232 PGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEG 311 (376)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 311 (376)
+.......... .....+....... ....++.....+.................... ........++++
T Consensus 152 ~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i-- 219 (278)
T TIGR03056 152 PFTPPMMSRGA-ADQQRVERLIRDT----GSLLDKAGMTYYGRLIRSPAHVDGALSMMAQW-----DLAPLNRDLPRI-- 219 (278)
T ss_pred ccchHHHHhhc-ccCcchhHHhhcc----ccccccchhhHHHHhhcCchhhhHHHHHhhcc-----cccchhhhcccC--
Confidence 11111000000 0001111111100 00111111111111111110000011111100 001133456778
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
++|+++|+|++|..++.+..+.+.+..++++++.++++ |++++|.|+++++.|.+|++
T Consensus 220 ~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 220 TIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred CCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 99999999999999999999999988999999999998 99999999999999999984
No 11
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=2.1e-31 Score=234.17 Aligned_cols=258 Identities=16% Similarity=0.154 Sum_probs=165.3
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHH---HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCC-CCHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRL---VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMD-YNADVM 149 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~---~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~-~~~~~~ 149 (376)
|.+++|...|+ +++|||+||++ .+...|.. .+..+.+. +|+|+++|+||||+|+.+..+ .....+
T Consensus 19 ~~~~~y~~~g~-----~~~ivllHG~~--~~~~~~~~~~~~~~~l~~~----~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 87 (282)
T TIGR03343 19 NFRIHYNEAGN-----GEAVIMLHGGG--PGAGGWSNYYRNIGPFVDA----GYRVILKDSPGFNKSDAVVMDEQRGLVN 87 (282)
T ss_pred ceeEEEEecCC-----CCeEEEECCCC--CchhhHHHHHHHHHHHHhC----CCEEEEECCCCCCCCCCCcCcccccchh
Confidence 57799998875 67899999999 87777754 34455543 899999999999999854321 122256
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhh
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTL 229 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (376)
++++.++++.++ .++++++||||||.+++.+|.++|++++++|+++|..... ..... ......... ....
T Consensus 88 ~~~l~~~l~~l~------~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~--~~~~~-~~~~~~~~~-~~~~ 157 (282)
T TIGR03343 88 ARAVKGLMDALD------IEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGP--SLFAP-MPMEGIKLL-FKLY 157 (282)
T ss_pred HHHHHHHHHHcC------CCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCc--ccccc-CchHHHHHH-HHHh
Confidence 889999999997 7889999999999999999999999999999998743111 00000 000000000 0000
Q ss_pred ccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcc
Q 017180 230 RAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADL 309 (376)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 309 (376)
..+. ......... ....+....+++..+......... ......+...............+.++++
T Consensus 158 ~~~~------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~i 222 (282)
T TIGR03343 158 AEPS------------YETLKQMLN-VFLFDQSLITEELLQGRWENIQRQ--PEHLKNFLISSQKAPLSTWDVTARLGEI 222 (282)
T ss_pred cCCC------------HHHHHHHHh-hCccCcccCcHHHHHhHHHHhhcC--HHHHHHHHHhccccccccchHHHHHhhC
Confidence 0000 111111111 111112223333322211111100 0001111110000000111245567888
Q ss_pred cCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 310 EGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 310 ~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
++|+|+|+|++|.+++++..+++.+..+++++++++++ |+++.|+|+++++.|.+||+
T Consensus 223 --~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 223 --KAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred --CCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999998 99999999999999999996
No 12
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=5.9e-32 Score=234.05 Aligned_cols=250 Identities=13% Similarity=0.123 Sum_probs=160.0
Q ss_pred eEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHH
Q 017180 76 NIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVD 155 (376)
Q Consensus 76 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~ 155 (376)
.++|...|.+ .++||||||++ ++...|+.+++.|.+ +|+|+++|+||||.|+.+. .++.+++++++.+
T Consensus 3 ~~~y~~~G~g----~~~ivllHG~~--~~~~~w~~~~~~L~~-----~~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~l~~ 70 (256)
T PRK10349 3 NIWWQTKGQG----NVHLVLLHGWG--LNAEVWRCIDEELSS-----HFTLHLVDLPGFGRSRGFG-ALSLADMAEAVLQ 70 (256)
T ss_pred ccchhhcCCC----CCeEEEECCCC--CChhHHHHHHHHHhc-----CCEEEEecCCCCCCCCCCC-CCCHHHHHHHHHh
Confidence 4678888863 34699999999 999999999999998 7999999999999998553 5777777666553
Q ss_pred HHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchh
Q 017180 156 LINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVG 235 (376)
Q Consensus 156 ~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (376)
+. .++++++||||||.+++.+|.++|++|+++|++++........ ...... .........
T Consensus 71 ----~~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~--~~~~~~---~~~~~~~~~----- 130 (256)
T PRK10349 71 ----QA------PDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARD--EWPGIK---PDVLAGFQQ----- 130 (256)
T ss_pred ----cC------CCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCC--CCCccc---HHHHHHHHH-----
Confidence 33 5789999999999999999999999999999998742110000 000000 000000000
Q ss_pred hHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhc-cCCCc-hhHHHhhccCCCCCcHHHHHHHHhcccCCC
Q 017180 236 WMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKR-KGARY-VPAAFLTGLLDPVNSREEFLQLFADLEGKL 313 (376)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 313 (376)
.+... ....+..++....+. ......+.. ........ ..... ............ ++.+.+.++ ++
T Consensus 131 -~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~i--~~ 197 (256)
T PRK10349 131 -QLSDD---FQRTVERFLALQTMG-TETARQDAR-ALKKTVLALPMPEVDVLNGGLEILKTV-----DLRQPLQNV--SM 197 (256)
T ss_pred -HHHhc---hHHHHHHHHHHHHcc-CchHHHHHH-HHHHHhhccCCCcHHHHHHHHHHHHhC-----ccHHHHhhc--CC
Confidence 00000 011111111111110 011111111 11111111 10000 000000100011 145567788 99
Q ss_pred cEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 314 PLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 314 Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
|||+|+|++|.+++.+..+.+.+.++++++++++++ |++++|+|++|++.|.+|-++
T Consensus 198 P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 198 PFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred CeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999 999999999999999999654
No 13
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=2.6e-32 Score=235.85 Aligned_cols=246 Identities=12% Similarity=0.037 Sum_probs=159.7
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
.+|||+||++ .+...|+.+++.|.+. +|+|+++|+||||.|+.+. ..++.+++++|+.+++++++ ..+
T Consensus 4 ~~vvllHG~~--~~~~~w~~~~~~L~~~----~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~-----~~~ 72 (255)
T PLN02965 4 IHFVFVHGAS--HGAWCWYKLATLLDAA----GFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLP-----PDH 72 (255)
T ss_pred eEEEEECCCC--CCcCcHHHHHHHHhhC----CceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcC-----CCC
Confidence 4599999999 9999999999999654 8999999999999998543 46899999999999999986 235
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhcc--HH
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSN--EK 247 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 247 (376)
+++++||||||.+++.+|.++|++|+++|++++.... +.. ............... ............. ..
T Consensus 73 ~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~--~~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 144 (255)
T PLN02965 73 KVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVK--PGS----IISPRLKNVMEGTEK--IWDYTFGEGPDKPPTGI 144 (255)
T ss_pred CEEEEecCcchHHHHHHHHhCchheeEEEEEccccCC--CCC----CccHHHHhhhhcccc--ceeeeeccCCCCCcchh
Confidence 8999999999999999999999999999999874210 000 000000000000000 0000000000000 00
Q ss_pred HHHH-HHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCC
Q 017180 248 AIQS-QYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRR 326 (376)
Q Consensus 248 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~ 326 (376)
.++. ......+. . ...+......... .+....... ...++...+.++ ++|+++|+|++|.++
T Consensus 145 ~~~~~~~~~~~~~-~--~~~~~~~~~~~~~-~~~~~~~~~-----------~~~~~~~~~~~i--~vP~lvi~g~~D~~~ 207 (255)
T PLN02965 145 MMKPEFVRHYYYN-Q--SPLEDYTLSSKLL-RPAPVRAFQ-----------DLDKLPPNPEAE--KVPRVYIKTAKDNLF 207 (255)
T ss_pred hcCHHHHHHHHhc-C--CCHHHHHHHHHhc-CCCCCcchh-----------hhhhccchhhcC--CCCEEEEEcCCCCCC
Confidence 0000 00000111 0 1111111111111 111000000 000122234567 999999999999999
Q ss_pred CHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 327 SKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
+++..+.+.+..+++++++++++ |++++|+|++|++.|.+|++++.
T Consensus 208 ~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 208 DPVRQDVMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred CHHHHHHHHHhCCcceEEEecCCCCchhhcCHHHHHHHHHHHHHHhc
Confidence 99999999999999999999998 99999999999999999998764
No 14
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=9.4e-31 Score=239.45 Aligned_cols=276 Identities=13% Similarity=0.146 Sum_probs=170.4
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHH-HHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHH
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRL-VAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADV 148 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~-~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~ 148 (376)
..+|.+++|...|+.....+++|||+||++ ++...|.. ++..|.+.. +.+|+|+++|+||||.|+.+. ..++.++
T Consensus 182 ~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~--~s~~~W~~~~~~~L~~~~-~~~yrVia~Dl~G~G~S~~p~~~~ytl~~ 258 (481)
T PLN03087 182 SSSNESLFVHVQQPKDNKAKEDVLFIHGFI--SSSAFWTETLFPNFSDAA-KSTYRLFAVDLLGFGRSPKPADSLYTLRE 258 (481)
T ss_pred eeCCeEEEEEEecCCCCCCCCeEEEECCCC--ccHHHHHHHHHHHHHHHh-hCCCEEEEECCCCCCCCcCCCCCcCCHHH
Confidence 345689999999976533357999999999 99999985 446665310 018999999999999999653 5689999
Q ss_pred HHHHHH-HHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHh
Q 017180 149 MEKFVV-DLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRG 227 (376)
Q Consensus 149 ~~~~l~-~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (376)
+++++. .++++++ .++++++||||||.+++.+|.++|++|+++|+++|.... .+. .. .........
T Consensus 259 ~a~~l~~~ll~~lg------~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~-~~~-----~~-~~~~~~~~~ 325 (481)
T PLN03087 259 HLEMIERSVLERYK------VKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYP-VPK-----GV-QATQYVMRK 325 (481)
T ss_pred HHHHHHHHHHHHcC------CCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccc-ccc-----ch-hHHHHHHHH
Confidence 999995 8899987 788999999999999999999999999999999874311 110 00 000000000
Q ss_pred hhccCc-----hhhHH---hhhhhc--------cHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhc
Q 017180 228 TLRAPG-----VGWMM---YNMLVS--------NEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTG 291 (376)
Q Consensus 228 ~~~~~~-----~~~~~---~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (376)
...... ..... +..... ...... .+... .. .........+.+..... .........+...
T Consensus 326 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~l-~~-~~~~~~~l~~~~~~~~~-~~~~~~l~~~i~~ 401 (481)
T PLN03087 326 VAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWE-FLTRL-LT-RNRMRTFLIEGFFCHTH-NAAWHTLHNIICG 401 (481)
T ss_pred hcccccCCccccchhHHHHHHHHHhhhhcccccchHHHH-HHHHH-hh-hhhhhHHHHHHHHhccc-hhhHHHHHHHHhc
Confidence 000000 00000 000000 000000 00000 00 00000001100000000 0000000111111
Q ss_pred cCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCC-CChHHHHHHHHHHHH
Q 017180 292 LLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQE-EYPAMVAQELYQFLQ 369 (376)
Q Consensus 292 ~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~-e~pe~~~~~i~~fl~ 369 (376)
.... ..+.+....++| ++|+|+|+|++|.++|.+..+.+++.+|++++++++++ |++++ |+|+++++.|.+|..
T Consensus 402 ~~~~--l~~~l~~l~~~I--~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~ 477 (481)
T PLN03087 402 SGSK--LDGYLDHVRDQL--KCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWR 477 (481)
T ss_pred hhhh--hhhHHHHHHHhC--CCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhh
Confidence 0000 011133344568 99999999999999999999999999999999999999 99885 999999999999986
Q ss_pred h
Q 017180 370 Q 370 (376)
Q Consensus 370 ~ 370 (376)
.
T Consensus 478 ~ 478 (481)
T PLN03087 478 R 478 (481)
T ss_pred c
Confidence 5
No 15
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.98 E-value=7.1e-31 Score=227.31 Aligned_cols=252 Identities=13% Similarity=0.146 Sum_probs=163.0
Q ss_pred eEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHH
Q 017180 76 NIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVD 155 (376)
Q Consensus 76 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~ 155 (376)
+++|...+...+..+|+|||+||++ ++...|..++..|.+ +|+|+++|+||||.|+.+ ..++.+++++|+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~--~~~~~~~~~~~~l~~-----~~~vi~~D~~G~G~s~~~-~~~~~~~~~~d~~~ 73 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLF--GSLDNLGVLARDLVN-----DHDIIQVDMRNHGLSPRD-PVMNYPAMAQDLLD 73 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCC--CchhHHHHHHHHHhh-----CCeEEEECCCCCCCCCCC-CCCCHHHHHHHHHH
Confidence 3455554333222278999999999 999999999999988 899999999999999865 45899999999999
Q ss_pred HHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchh
Q 017180 156 LINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVG 235 (376)
Q Consensus 156 ~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (376)
++++++ .++++|+||||||.+++.+|.++|++|+++|++++...... .. ........+.......
T Consensus 74 ~l~~l~------~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~-----~~-~~~~~~~~~~~~~~~~--- 138 (255)
T PRK10673 74 TLDALQ------IEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYH-----VR-RHDEIFAAINAVSEAG--- 138 (255)
T ss_pred HHHHcC------CCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCcc-----ch-hhHHHHHHHHHhhhcc---
Confidence 999986 67899999999999999999999999999999975321100 00 0000000000000000
Q ss_pred hHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcE
Q 017180 236 WMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPL 315 (376)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pv 315 (376)
. .........+... . ............................... ....+.++++ ++|+
T Consensus 139 ------~-~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~P~ 198 (255)
T PRK10673 139 ------A-TTRQQAAAIMRQH-L-----NEEGVIQFLLKSFVDGEWRFNVPVLWDQYPH-----IVGWEKIPAW--PHPA 198 (255)
T ss_pred ------c-ccHHHHHHHHHHh-c-----CCHHHHHHHHhcCCcceeEeeHHHHHHhHHH-----HhCCcccCCC--CCCe
Confidence 0 0000000000000 0 0001111110000000000000000000000 0001234566 8999
Q ss_pred EEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 316 LVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 316 lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
|+|+|++|..++.+..+.+.+..+++++++++++ |++++|+|+++++.|.+||.+
T Consensus 199 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 199 LFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred EEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999 999999999999999999975
No 16
>PRK06489 hypothetical protein; Provisional
Probab=99.98 E-value=8.8e-31 Score=237.07 Aligned_cols=271 Identities=17% Similarity=0.115 Sum_probs=164.2
Q ss_pred CceeEEEEecccCCC----CCCCcEEEecCCCCCccchHhH--HHHHHH--------HhhhCCcceEEEEeCCCCCcCCC
Q 017180 73 NSINIYYEKHERESP----DPSKNILMIPTISDVSTVEEWR--LVAQDI--------VQRVGKVNWRATIVDWPGLGYSD 138 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~----~~~~~vvllHG~~~~~~~~~~~--~~~~~L--------~~~~~~~~~~Vi~~D~~G~G~S~ 138 (376)
+|.+++|...|++.. +.+|+|||+||++ ++...|. .+...| .+ +|+||++|+||||.|+
T Consensus 48 ~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~--~~~~~~~~~~~~~~l~~~~~~l~~~-----~~~Via~Dl~GhG~S~ 120 (360)
T PRK06489 48 PELRLHYTTLGTPHRNADGEIDNAVLVLHGTG--GSGKSFLSPTFAGELFGPGQPLDAS-----KYFIILPDGIGHGKSS 120 (360)
T ss_pred CCceEEEEecCCCCcccccCCCCeEEEeCCCC--CchhhhccchhHHHhcCCCCccccc-----CCEEEEeCCCCCCCCC
Confidence 488999999986421 1147899999999 8887775 454444 44 7999999999999998
Q ss_pred CCCC-------CCCHHHHHHHHHHHH-hCCCCCCCCCCCcEE-EEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCC
Q 017180 139 RPKM-------DYNADVMEKFVVDLI-NAPDSPVSSSESDLV-IFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLP 209 (376)
Q Consensus 139 ~~~~-------~~~~~~~~~~l~~~l-~~l~~~~~~~~~~~~-lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~ 209 (376)
.+.. .++++++++++.+++ ++++ .++++ |+||||||.+|+.+|.++|++|+++|++++..... .
T Consensus 121 ~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lg------i~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~-~ 193 (360)
T PRK06489 121 KPSDGLRAAFPRYDYDDMVEAQYRLVTEGLG------VKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEM-S 193 (360)
T ss_pred CCCcCCCCCCCcccHHHHHHHHHHHHHHhcC------CCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccc-c
Confidence 6542 488999999888754 7786 56775 89999999999999999999999999998642100 0
Q ss_pred cccCCCCchhhhhHHHHhhhccCchhhHHhhhh-hccHHHHHH--HHHhc---ccCCCCCCCh----HHHHHHHHHHhcc
Q 017180 210 IVFGRDSSMETRYGLLRGTLRAPGVGWMMYNML-VSNEKAIQS--QYKSH---VYSNPDNVTP----GIVESRYALTKRK 279 (376)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~ 279 (376)
.. ......................+... ......... ..... .+.. ..... ...+.........
T Consensus 194 ---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 267 (360)
T PRK06489 194 ---GR--NWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQA-QAPTRAAADKLVDERLAAPVTA 267 (360)
T ss_pred ---HH--HHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHH-hcCChHHHHHHHHHHHHhhhhc
Confidence 00 00000000000000000000000000 000000000 00000 0000 00111 1111111111111
Q ss_pred CCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHH--HHHhcccCCceEEEeCC-----CCCC
Q 017180 280 GARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEM--EALKGAKGVTKFVEVPG-----ALLP 352 (376)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~--~~~~~~~~~~~~~~~~~-----~H~~ 352 (376)
....+........... ..+.+++| ++|||+|+|++|.+++.+.. +.+.+.+|+++++++++ ||++
T Consensus 268 -~~~~~~~~~~~~~~~d-----~~~~L~~I--~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~ 339 (360)
T PRK06489 268 -DANDFLYQWDSSRDYN-----PSPDLEKI--KAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGT 339 (360)
T ss_pred -CHHHHHHHHHHhhccC-----hHHHHHhC--CCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCccc
Confidence 1111111111111111 45678888 99999999999999998865 77888999999999998 4999
Q ss_pred CCCChHHHHHHHHHHHHhhc
Q 017180 353 QEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 353 ~~e~pe~~~~~i~~fl~~~~ 372 (376)
+ |+|++|++.|.+||+++.
T Consensus 340 ~-e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 340 T-GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred c-cCHHHHHHHHHHHHHhcc
Confidence 7 899999999999998764
No 17
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.98 E-value=7.5e-31 Score=236.79 Aligned_cols=268 Identities=15% Similarity=0.129 Sum_probs=169.6
Q ss_pred ecCCceeEEEEecccCCCCCCCcEEEecCCCCCccch-HhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHH
Q 017180 70 FKENSINIYYEKHERESPDPSKNILMIPTISDVSTVE-EWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNAD 147 (376)
Q Consensus 70 ~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~-~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~ 147 (376)
...+|.+|+|..+++.+.+++++|||+||++ .+.. .|..++..|++. ||+|+++|+||||.|+.+. ...+.+
T Consensus 67 ~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~--~~~~~~~~~~~~~l~~~----g~~v~~~D~~G~G~S~~~~~~~~~~~ 140 (349)
T PLN02385 67 VNSRGVEIFSKSWLPENSRPKAAVCFCHGYG--DTCTFFFEGIARKIASS----GYGVFAMDYPGFGLSEGLHGYIPSFD 140 (349)
T ss_pred EcCCCCEEEEEEEecCCCCCCeEEEEECCCC--CccchHHHHHHHHHHhC----CCEEEEecCCCCCCCCCCCCCcCCHH
Confidence 3456999999998865433467899999999 7765 468889999876 8999999999999998653 245889
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHh
Q 017180 148 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRG 227 (376)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (376)
++++|+.++++.+.........+++|+||||||.+++.++.++|++++++|+++|....... .... .........+..
T Consensus 141 ~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~-~~~~-~~~~~~~~~~~~ 218 (349)
T PLN02385 141 DLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADD-VVPP-PLVLQILILLAN 218 (349)
T ss_pred HHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccccccccc-ccCc-hHHHHHHHHHHH
Confidence 99999999987764211112347999999999999999999999999999999984311000 0000 000000000000
Q ss_pred hhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHH--Hhc--cCCCchhHHHhhccCCCCCcHHHHH
Q 017180 228 TLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYAL--TKR--KGARYVPAAFLTGLLDPVNSREEFL 303 (376)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (376)
.. +.. .. .....+... .+........... ... ..........+. ....+.
T Consensus 219 ~~--p~~-----~~-----------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------~~~~~~ 272 (349)
T PLN02385 219 LL--PKA-----KL-----------VPQKDLAEL-AFRDLKKRKMAEYNVIAYKDKPRLRTAVELLR-------TTQEIE 272 (349)
T ss_pred HC--CCc-----ee-----------cCCCccccc-cccCHHHHHHhhcCcceeCCCcchHHHHHHHH-------HHHHHH
Confidence 00 000 00 000000000 0000000000000 000 000000011110 111245
Q ss_pred HHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc--CCceEEEeCCC-CCCCCCChHH----HHHHHHHHHHhhcC
Q 017180 304 QLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK--GVTKFVEVPGA-LLPQEEYPAM----VAQELYQFLQQTFE 373 (376)
Q Consensus 304 ~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~-H~~~~e~pe~----~~~~i~~fl~~~~~ 373 (376)
..+.++ ++|+|+|+|++|.+++.+..+.+.+.. +++++++++++ |++++|+|++ +.+.|.+||.+...
T Consensus 273 ~~l~~i--~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 273 MQLEEV--SLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HhcccC--CCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 567788 999999999999999999998887654 57899999999 9999999987 88889999998753
No 18
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.97 E-value=1.9e-30 Score=223.44 Aligned_cols=249 Identities=15% Similarity=0.247 Sum_probs=169.0
Q ss_pred EEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHH
Q 017180 77 IYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDL 156 (376)
Q Consensus 77 l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~ 156 (376)
++|...|+.+. +|+|||+||++ .+...|..+++.|.+ +|+|+++|+||||.|+.+...++.+++++++.++
T Consensus 2 ~~~~~~g~~~~--~~~li~~hg~~--~~~~~~~~~~~~l~~-----~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~ 72 (251)
T TIGR02427 2 LHYRLDGAADG--APVLVFINSLG--TDLRMWDPVLPALTP-----DFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLAL 72 (251)
T ss_pred ceEEeecCCCC--CCeEEEEcCcc--cchhhHHHHHHHhhc-----ccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 56777776522 67899999999 999999999999987 8999999999999998766788999999999999
Q ss_pred HhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhh
Q 017180 157 INAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGW 236 (376)
Q Consensus 157 l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (376)
++.++ .++++++||||||.+++.+|.++|++++++|++++......+ ............. .
T Consensus 73 i~~~~------~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~---------~~~~~~~~~~~~~-~--- 133 (251)
T TIGR02427 73 LDHLG------IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTP---------ESWNARIAAVRAE-G--- 133 (251)
T ss_pred HHHhC------CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCch---------hhHHHHHhhhhhc-c---
Confidence 99986 678999999999999999999999999999999864211000 0000000000000 0
Q ss_pred HHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEE
Q 017180 237 MMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLL 316 (376)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvl 316 (376)
..... ...+..++... +. .......+.+......... ..+.......... ...+.++++ ++|++
T Consensus 134 -~~~~~---~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~--~~Pvl 197 (251)
T TIGR02427 134 -LAALA---DAVLERWFTPG-FR---EAHPARLDLYRNMLVRQPP-DGYAGCCAAIRDA-----DFRDRLGAI--AVPTL 197 (251)
T ss_pred -HHHHH---HHHHHHHcccc-cc---cCChHHHHHHHHHHHhcCH-HHHHHHHHHHhcc-----cHHHHhhhc--CCCeE
Confidence 00000 11111111111 10 1111122222221111110 1111111111111 144567778 99999
Q ss_pred EEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 317 VVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 317 ii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
+++|++|.+++.+..+.+.+..++.++++++++ |++++++|+++.+.|.+|++
T Consensus 198 ii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 198 CIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred EEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 999999999999998988888899999999988 99999999999999999974
No 19
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.97 E-value=3.8e-30 Score=222.69 Aligned_cols=254 Identities=12% Similarity=0.118 Sum_probs=164.0
Q ss_pred EEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCCCHHHHHHHHHHH
Q 017180 78 YYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEKFVVDL 156 (376)
Q Consensus 78 ~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~~l~~~ 156 (376)
+|...|+.++ .+|+|||+||++ ++...|..++..|.+ +|+|+++|+||||.|+.+ ...++.+++++++.++
T Consensus 2 ~~~~~~~~~~-~~~~iv~lhG~~--~~~~~~~~~~~~l~~-----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 73 (257)
T TIGR03611 2 HYELHGPPDA-DAPVVVLSSGLG--GSGSYWAPQLDVLTQ-----RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQL 73 (257)
T ss_pred EEEEecCCCC-CCCEEEEEcCCC--cchhHHHHHHHHHHh-----ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHH
Confidence 5677775322 267899999999 999999999999987 899999999999999843 4578999999999999
Q ss_pred HhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhh
Q 017180 157 INAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGW 236 (376)
Q Consensus 157 l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (376)
+++++ .++++++||||||.+++.+|.++|++++++|++++..... +. ...................
T Consensus 74 i~~~~------~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~ 139 (257)
T TIGR03611 74 LDALN------IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPD-PH-------TRRCFDVRIALLQHAGPEA 139 (257)
T ss_pred HHHhC------CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCC-hh-------HHHHHHHHHHHHhccCcch
Confidence 99986 6789999999999999999999999999999998632110 00 0000000000000000000
Q ss_pred HHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEE
Q 017180 237 MMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLL 316 (376)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvl 316 (376)
.... .... .....+.. .......+.......................... ....+.++ ++|++
T Consensus 140 ~~~~----~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i--~~P~l 202 (257)
T TIGR03611 140 YVHA----QALF---LYPADWIS---ENAARLAADEAHALAHFPGKANVLRRINALEAFD-----VSARLDRI--QHPVL 202 (257)
T ss_pred hhhh----hhhh---hccccHhh---ccchhhhhhhhhcccccCccHHHHHHHHHHHcCC-----cHHHhccc--CccEE
Confidence 0000 0000 00000000 0000000000000000000000010011111111 33456777 99999
Q ss_pred EEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 317 VVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 317 ii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
+++|++|..++.+..+.+.+..++++++.++++ |++++++|+++++.|.+||++
T Consensus 203 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 203 LIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred EEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 999999999999999999888899999999998 999999999999999999863
No 20
>PHA02857 monoglyceride lipase; Provisional
Probab=99.97 E-value=3.4e-29 Score=219.22 Aligned_cols=257 Identities=17% Similarity=0.164 Sum_probs=159.7
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHHHH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVME 150 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~~~ 150 (376)
.+|.+|+|+.+-++. .+++.|+|+||++ ++...|..++..|.+. ||+|+++|+||||.|+... ...+...+.
T Consensus 8 ~~g~~l~~~~~~~~~-~~~~~v~llHG~~--~~~~~~~~~~~~l~~~----g~~via~D~~G~G~S~~~~~~~~~~~~~~ 80 (276)
T PHA02857 8 LDNDYIYCKYWKPIT-YPKALVFISHGAG--EHSGRYEELAENISSL----GILVFSHDHIGHGRSNGEKMMIDDFGVYV 80 (276)
T ss_pred CCCCEEEEEeccCCC-CCCEEEEEeCCCc--cccchHHHHHHHHHhC----CCEEEEccCCCCCCCCCccCCcCCHHHHH
Confidence 358899998875532 2245566669999 9999999999999886 8999999999999998532 223555666
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
+|+.++++.+.... ...+++|+||||||.+|+.+|.++|++++++|+++|.... ..................
T Consensus 81 ~d~~~~l~~~~~~~--~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~------~~~~~~~~~~~~~~~~~~ 152 (276)
T PHA02857 81 RDVVQHVVTIKSTY--PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNA------EAVPRLNLLAAKLMGIFY 152 (276)
T ss_pred HHHHHHHHHHHhhC--CCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccc------ccccHHHHHHHHHHHHhC
Confidence 66666665432111 2468999999999999999999999999999999984310 000000000000000000
Q ss_pred -cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCC--chhHHHhhccCCCCCcHHHHHHHHh
Q 017180 231 -APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGAR--YVPAAFLTGLLDPVNSREEFLQLFA 307 (376)
Q Consensus 231 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (376)
....... .+....+...+. ......+... .....+...... ......+.+.
T Consensus 153 ~~~~~~~~----------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~ 206 (276)
T PHA02857 153 PNKIVGKL----------------------CPESVSRDMDEV-YKYQYDPLVNHEKIKAGFASQVLK---ATNKVRKIIP 206 (276)
T ss_pred CCCccCCC----------------------CHhhccCCHHHH-HHHhcCCCccCCCccHHHHHHHHH---HHHHHHHhcc
Confidence 0000000 000000000000 0000000000 000000000000 0112455677
Q ss_pred cccCCCcEEEEEeCCCCCCCHHHHHHHhccc-CCceEEEeCCC-CCCCCCCh---HHHHHHHHHHHHhh
Q 017180 308 DLEGKLPLLVVSTEGSPRRSKAEMEALKGAK-GVTKFVEVPGA-LLPQEEYP---AMVAQELYQFLQQT 371 (376)
Q Consensus 308 ~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~-H~~~~e~p---e~~~~~i~~fl~~~ 371 (376)
++ ++|+|+|+|++|.++|.+..+++.+.. +++++++++++ |+++.|.+ +++.+.+.+||.+.
T Consensus 207 ~i--~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 207 KI--KTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred cC--CCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 88 999999999999999999999987654 57899999999 99998876 57899999999885
No 21
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=3.9e-30 Score=226.17 Aligned_cols=259 Identities=19% Similarity=0.249 Sum_probs=164.5
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCC-CCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPK-MDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~-~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
+++||++|||+ ++...|+.++..|.+.. |++|+++|++|||.|+ .+. ..|+..++.+.+..++.+..
T Consensus 58 ~~pvlllHGF~--~~~~~w~~~~~~L~~~~---~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~------ 126 (326)
T KOG1454|consen 58 KPPVLLLHGFG--ASSFSWRRVVPLLSKAK---GLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVF------ 126 (326)
T ss_pred CCcEEEecccc--CCcccHhhhcccccccc---ceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhc------
Confidence 88999999999 99999999999999841 3999999999999554 433 46999999999999999987
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEE---EeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhc
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIA---AVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVS 244 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lv---l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (376)
..++++||||+||.+|..+|+.+|+.|+++| ++++.... ...........+................ .
T Consensus 127 ~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~ 197 (326)
T KOG1454|consen 127 VEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYS-------TPKGIKGLRRLLDKFLSALELLIPLSLT--E 197 (326)
T ss_pred CcceEEEEeCcHHHHHHHHHHhCcccccceeeeccccccccc-------CCcchhHHHHhhhhhccHhhhcCccccc--c
Confidence 7789999999999999999999999999999 55543210 0111111111111111110000000000 0
Q ss_pred cHHHHHHHHHh---cccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeC
Q 017180 245 NEKAIQSQYKS---HVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTE 321 (376)
Q Consensus 245 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~ 321 (376)
........... ..+.+.....+...............+.....+...... ..+.....++++. +||+|+++|+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~-~~pvlii~G~ 273 (326)
T KOG1454|consen 198 PVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLG---FDENLLSLIKKIW-KCPVLIIWGD 273 (326)
T ss_pred chhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccC---ccchHHHhhcccc-CCceEEEEcC
Confidence 00000000110 111111111111111111100000111111111111111 1122445667772 4999999999
Q ss_pred CCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 322 GSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 322 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
+|.++|.+..+.+++..|++++++++++ |.+++|.||++++.|..|+++..
T Consensus 274 ~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 274 KDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred cCCccCHHHHHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 9999999999999888899999999998 99999999999999999998764
No 22
>PRK07581 hypothetical protein; Validated
Probab=99.97 E-value=1.5e-29 Score=227.82 Aligned_cols=280 Identities=13% Similarity=0.032 Sum_probs=163.3
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHH---HHHHhhhCCcceEEEEeCCCCCcCCCCCCC---CCCH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVA---QDIVQRVGKVNWRATIVDWPGLGYSDRPKM---DYNA 146 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~---~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~---~~~~ 146 (376)
+|++++|...|+..+...++||++||++ ++...|..++ +.|... +|+||++|+||||.|+.+.. .++.
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~--~~~~~~~~~~~~~~~l~~~----~~~vi~~D~~G~G~S~~~~~~~~~~~~ 97 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYS--GTHQDNEWLIGPGRALDPE----KYFIIIPNMFGNGLSSSPSNTPAPFNA 97 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCC--CCcccchhhccCCCccCcC----ceEEEEecCCCCCCCCCCCCCCCCCCC
Confidence 3789999999974322135566667777 6666665443 356533 79999999999999985532 3554
Q ss_pred HH-----HHHHHHH----HHhCCCCCCCCCCCc-EEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCC
Q 017180 147 DV-----MEKFVVD----LINAPDSPVSSSESD-LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDS 216 (376)
Q Consensus 147 ~~-----~~~~l~~----~l~~l~~~~~~~~~~-~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~ 216 (376)
+. +++++.+ ++++++ .++ ++||||||||.+|+.+|.++|++|+++|++++... ..+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~l~~~lg------i~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~-~~~~------ 164 (339)
T PRK07581 98 ARFPHVTIYDNVRAQHRLLTEKFG------IERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAK-TTPH------ 164 (339)
T ss_pred CCCCceeHHHHHHHHHHHHHHHhC------CCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCC-CCHH------
Confidence 43 4666655 677887 677 57999999999999999999999999999986421 0000
Q ss_pred chhhhhHHHHhhhccCch--------h-hHHhhhhh--ccHHHHHHHHHhcccCCCCCCC-hHHHHHHHHHHhccCCCch
Q 017180 217 SMETRYGLLRGTLRAPGV--------G-WMMYNMLV--SNEKAIQSQYKSHVYSNPDNVT-PGIVESRYALTKRKGARYV 284 (376)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 284 (376)
...........+...+.. . ..+..... ........++....+....... ++....+............
T Consensus 165 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (339)
T PRK07581 165 NFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNN 244 (339)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCccc
Confidence 000000000000000000 0 00000000 0000000011101000000000 1222222221111111111
Q ss_pred hHHHhh----c-cCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCC-C-CCCCCCCh
Q 017180 285 PAAFLT----G-LLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPG-A-LLPQEEYP 357 (376)
Q Consensus 285 ~~~~~~----~-~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~-H~~~~e~p 357 (376)
....+. . .........+..+.+++| ++|||+|+|++|..++.+..+.+.+.+++++++++++ + |++++|+|
T Consensus 245 ~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I--~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~ 322 (339)
T PRK07581 245 LLAMLWTWQRGDISRNPAYGGDLAAALGSI--TAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQN 322 (339)
T ss_pred HHHHHHHhhhcccccCcccCCCHHHHHhcC--CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCc
Confidence 222111 0 000000001256678888 9999999999999999999999998999999999998 7 99999999
Q ss_pred HHHHHHHHHHHHhhcC
Q 017180 358 AMVAQELYQFLQQTFE 373 (376)
Q Consensus 358 e~~~~~i~~fl~~~~~ 373 (376)
++++..|.+||++.++
T Consensus 323 ~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 323 PADIAFIDAALKELLA 338 (339)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999875
No 23
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.97 E-value=1.5e-29 Score=217.25 Aligned_cols=238 Identities=14% Similarity=0.150 Sum_probs=149.6
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+|+|||+||++ ++...|+.+++.| + +|+|+++|+||||.|+.+. ..+.+.+++++.+++++++ .+
T Consensus 2 ~p~vvllHG~~--~~~~~w~~~~~~l-~-----~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~l~~~l~~~~------~~ 66 (242)
T PRK11126 2 LPWLVFLHGLL--GSGQDWQPVGEAL-P-----DYPRLYIDLPGHGGSAAIS-VDGFADVSRLLSQTLQSYN------IL 66 (242)
T ss_pred CCEEEEECCCC--CChHHHHHHHHHc-C-----CCCEEEecCCCCCCCCCcc-ccCHHHHHHHHHHHHHHcC------CC
Confidence 67899999999 9999999999988 4 6999999999999998664 3589999999999999986 78
Q ss_pred cEEEEecchHHHHHHHHHHhCCCC-cceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHH
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVK-PTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKA 248 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (376)
+++++||||||.+++.+|.++|+. |++++++++... .. .. ......+. ........+... .....
T Consensus 67 ~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~--~~---~~---~~~~~~~~----~~~~~~~~~~~~--~~~~~ 132 (242)
T PRK11126 67 PYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPG--LQ---NA---EERQARWQ----NDRQWAQRFRQE--PLEQV 132 (242)
T ss_pred CeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCC--CC---CH---HHHHHHHh----hhHHHHHHhccC--cHHHH
Confidence 999999999999999999998765 999999876321 10 00 00000000 000000000000 00111
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCH
Q 017180 249 IQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSK 328 (376)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~ 328 (376)
+..++....+. ...++....+...... ............... . ...++.+.+.++ ++|+++|+|++|..+.
T Consensus 133 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~-~~~~~~~~l~~i--~~P~lii~G~~D~~~~- 203 (242)
T PRK11126 133 LADWYQQPVFA---SLNAEQRQQLVAKRSN-NNGAAVAAMLEATSL-A-KQPDLRPALQAL--TFPFYYLCGERDSKFQ- 203 (242)
T ss_pred HHHHHhcchhh---ccCccHHHHHHHhccc-CCHHHHHHHHHhcCc-c-cCCcHHHHhhcc--CCCeEEEEeCCcchHH-
Confidence 11111111111 1122222211111110 001111111111100 0 111245677888 9999999999998553
Q ss_pred HHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 329 AEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
. +.+. .++++++++++ |++++|+|+++++.|.+|+.+
T Consensus 204 ~----~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 204 A----LAQQ-LALPLHVIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred H----HHHH-hcCeEEEeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 2 2222 37899999998 999999999999999999976
No 24
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=1.1e-28 Score=208.08 Aligned_cols=263 Identities=12% Similarity=0.103 Sum_probs=163.6
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC----CCCHHHHHHHHHHHHhCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM----DYNADVMEKFVVDLINAPDSPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~----~~~~~~~~~~l~~~l~~l~~~~~ 165 (376)
+.|+|||||+| ++...|-..++.|++ .++|+++|++|+|+|++|.. ......+.+-++++-.+.+
T Consensus 90 ~~plVliHGyG--Ag~g~f~~Nf~~La~-----~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~---- 158 (365)
T KOG4409|consen 90 KTPLVLIHGYG--AGLGLFFRNFDDLAK-----IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMG---- 158 (365)
T ss_pred CCcEEEEeccc--hhHHHHHHhhhhhhh-----cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcC----
Confidence 67999999999 999999999999999 79999999999999998763 2333468888888888887
Q ss_pred CCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCC-cccCCCCchhhhhHHHHhhhccCchhhHHhhhhhc
Q 017180 166 SSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLP-IVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVS 244 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (376)
.++.+|||||+||.++..||.+||++|+.|||++|.+...-+ ...............+.... ...-.....+.+..
T Consensus 159 --L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~-~~~nPl~~LR~~Gp 235 (365)
T KOG4409|consen 159 --LEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVA-TNFNPLALLRLMGP 235 (365)
T ss_pred --CcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhh-hcCCHHHHHHhccc
Confidence 789999999999999999999999999999999996533222 11111111111111000000 00000011111100
Q ss_pred c-HHHHHHHHHhcccC-CCCCCChHHHHH-HHHHHh-ccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEe
Q 017180 245 N-EKAIQSQYKSHVYS-NPDNVTPGIVES-RYALTK-RKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVST 320 (376)
Q Consensus 245 ~-~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G 320 (376)
- +..+.. +....+. -+....++.+-. .+.... .+.+..++...+....- .+.-+.+.+..+...||+++|+|
T Consensus 236 ~Gp~Lv~~-~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~---Ar~Pm~~r~~~l~~~~pv~fiyG 311 (365)
T KOG4409|consen 236 LGPKLVSR-LRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGW---ARRPMIQRLRELKKDVPVTFIYG 311 (365)
T ss_pred cchHHHhh-hhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccch---hhhhHHHHHHhhccCCCEEEEec
Confidence 0 111111 1111111 111233444233 333322 22333333333322111 22235566666623499999999
Q ss_pred CCCCCCCHHHHHHHhc--ccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 321 EGSPRRSKAEMEALKG--AKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 321 ~~D~~~~~~~~~~~~~--~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
++|-+-. ....++.. ....++.++++++ |.+++++|+.|++.|.+++++.
T Consensus 312 ~~dWmD~-~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 312 DRDWMDK-NAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred Ccccccc-hhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 9995444 44444433 3446899999999 9999999999999999999864
No 25
>PRK10749 lysophospholipase L2; Provisional
Probab=99.97 E-value=2.4e-29 Score=224.98 Aligned_cols=273 Identities=14% Similarity=0.082 Sum_probs=166.2
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC------CCC
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK------MDY 144 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~------~~~ 144 (376)
..+|.+++|..++++.+ +++|||+||++ .+...|..++..|.+. ||+|+++|+||||.|+.+. ..+
T Consensus 37 ~~~g~~l~~~~~~~~~~--~~~vll~HG~~--~~~~~y~~~~~~l~~~----g~~v~~~D~~G~G~S~~~~~~~~~~~~~ 108 (330)
T PRK10749 37 GVDDIPIRFVRFRAPHH--DRVVVICPGRI--ESYVKYAELAYDLFHL----GYDVLIIDHRGQGRSGRLLDDPHRGHVE 108 (330)
T ss_pred cCCCCEEEEEEccCCCC--CcEEEEECCcc--chHHHHHHHHHHHHHC----CCeEEEEcCCCCCCCCCCCCCCCcCccc
Confidence 45688999999886432 67899999999 9999999999888776 9999999999999998542 125
Q ss_pred CHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHH
Q 017180 145 NADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGL 224 (376)
Q Consensus 145 ~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (376)
+.+++++|+.++++++.... ...+++++||||||.+++.+|.++|+.++++|+++|......+. .. ......
T Consensus 109 ~~~~~~~d~~~~~~~~~~~~--~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~-~~-----~~~~~~ 180 (330)
T PRK10749 109 RFNDYVDDLAAFWQQEIQPG--PYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL-PS-----WMARRI 180 (330)
T ss_pred cHHHHHHHHHHHHHHHHhcC--CCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCC-Cc-----HHHHHH
Confidence 88999999999998752111 25789999999999999999999999999999999843111000 00 000000
Q ss_pred HHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHh-ccCCC--chhHHHhhccCCCCCcHHH
Q 017180 225 LRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTK-RKGAR--YVPAAFLTGLLDPVNSREE 301 (376)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~ 301 (376)
.......+..... +... ... +.......+.-...++.......... .+... .....+...... ....
T Consensus 181 ~~~~~~~~~~~~~-~~~~--~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 250 (330)
T PRK10749 181 LNWAEGHPRIRDG-YAIG--TGR----WRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESIL---AGEQ 250 (330)
T ss_pred HHHHHHhcCCCCc-CCCC--CCC----CCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHH---HHHH
Confidence 0000000000000 0000 000 00000000000011222111111111 11100 001111110000 0011
Q ss_pred HHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc-------CCceEEEeCCC-CCCCCCCh---HHHHHHHHHHHHh
Q 017180 302 FLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK-------GVTKFVEVPGA-LLPQEEYP---AMVAQELYQFLQQ 370 (376)
Q Consensus 302 ~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~-------~~~~~~~~~~~-H~~~~e~p---e~~~~~i~~fl~~ 370 (376)
+...+.++ ++|+|+|+|++|.+++.+..+.+.+.. +++++++++++ |.++.|.+ +.+.+.|.+||++
T Consensus 251 ~~~~~~~i--~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 251 VLAGAGDI--TTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred HHhhccCC--CCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 23455677 899999999999999998888775533 45689999999 99998876 6788999999986
Q ss_pred h
Q 017180 371 T 371 (376)
Q Consensus 371 ~ 371 (376)
.
T Consensus 329 ~ 329 (330)
T PRK10749 329 H 329 (330)
T ss_pred c
Confidence 4
No 26
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=7.9e-29 Score=222.31 Aligned_cols=265 Identities=11% Similarity=0.091 Sum_probs=164.6
Q ss_pred CCceeEEEEecccCCC-CCCCcEEEecCCCCCccc-hHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHH
Q 017180 72 ENSINIYYEKHERESP-DPSKNILMIPTISDVSTV-EEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADV 148 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~-~~~~~vvllHG~~~~~~~-~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~ 148 (376)
.+|.+|+|+.+++... .++++|||+||++ .+. ..|..+...|.++ ||+|+++|+||||.|+.+. ...+.+.
T Consensus 40 ~dg~~l~~~~~~~~~~~~~~~~VvllHG~~--~~~~~~~~~~~~~L~~~----Gy~V~~~D~rGhG~S~~~~~~~~~~~~ 113 (330)
T PLN02298 40 PRGLSLFTRSWLPSSSSPPRALIFMVHGYG--NDISWTFQSTAIFLAQM----GFACFALDLEGHGRSEGLRAYVPNVDL 113 (330)
T ss_pred CCCCEEEEEEEecCCCCCCceEEEEEcCCC--CCcceehhHHHHHHHhC----CCEEEEecCCCCCCCCCccccCCCHHH
Confidence 4699999988765422 2256799999998 653 4566777788876 9999999999999998433 3467889
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
+++|+.++++.+.........+++|+||||||.+++.++.++|++|+++|+++|...... .. ................
T Consensus 114 ~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~-~~~~~~~~~~~~~~~~ 191 (330)
T PLN02298 114 VVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISD-KI-RPPWPIPQILTFVARF 191 (330)
T ss_pred HHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCc-cc-CCchHHHHHHHHHHHH
Confidence 999999999887522111235799999999999999999999999999999998431100 00 0000000000000000
Q ss_pred hccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCC---Cc---hhHHHhhccCCCCCcHHHH
Q 017180 229 LRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGA---RY---VPAAFLTGLLDPVNSREEF 302 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~ 302 (376)
........ ...... . ............ ..+.. .. ....... ..+..
T Consensus 192 ~~~~~~~~-----------------~~~~~~-~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-------~~~~~ 243 (330)
T PLN02298 192 LPTLAIVP-----------------TADLLE-K-SVKVPAKKIIAK--RNPMRYNGKPRLGTVVELLR-------VTDYL 243 (330)
T ss_pred CCCCcccc-----------------CCCccc-c-cccCHHHHHHHH--hCccccCCCccHHHHHHHHH-------HHHHH
Confidence 00000000 000000 0 000000000000 00000 00 0001110 01123
Q ss_pred HHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc--CCceEEEeCCC-CCCCCCChH----HHHHHHHHHHHhhcCC
Q 017180 303 LQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK--GVTKFVEVPGA-LLPQEEYPA----MVAQELYQFLQQTFEP 374 (376)
Q Consensus 303 ~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~-H~~~~e~pe----~~~~~i~~fl~~~~~~ 374 (376)
.+.+.++ ++|+|+|+|++|.+++.+..+.+.+.. +++++++++++ |.++.++|+ ++.+.|.+||.+..++
T Consensus 244 ~~~l~~i--~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~ 320 (330)
T PLN02298 244 GKKLKDV--SIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTG 320 (330)
T ss_pred HHhhhhc--CCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccC
Confidence 4567788 999999999999999999999886654 47899999999 999998885 4677889999987654
No 27
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=2.1e-29 Score=226.76 Aligned_cols=264 Identities=12% Similarity=0.060 Sum_probs=160.9
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccch------------HhHHHHH---HH-HhhhCCcceEEEEeCCCCCcC
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVE------------EWRLVAQ---DI-VQRVGKVNWRATIVDWPGLGY 136 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~------------~~~~~~~---~L-~~~~~~~~~~Vi~~D~~G~G~ 136 (376)
+|.+++|...|++ ++|+||+||+. ++.. .|..++. .| .+ +|+||++|+||||.
T Consensus 44 ~~~~l~y~~~G~~----~~p~vll~g~~--~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~-----~~~Vi~~Dl~G~g~ 112 (343)
T PRK08775 44 EDLRLRYELIGPA----GAPVVFVAGGI--SAHRHVAATATFPEKGWWEGLVGSGRALDPA-----RFRLLAFDFIGADG 112 (343)
T ss_pred CCceEEEEEeccC----CCCEEEEecCC--CcccccccccCCCCCCcchhccCCCCccCcc-----ccEEEEEeCCCCCC
Confidence 4889999999863 44688887766 5544 6888886 56 35 79999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCc-EEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCC
Q 017180 137 SDRPKMDYNADVMEKFVVDLINAPDSPVSSSESD-LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRD 215 (376)
Q Consensus 137 S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~ 215 (376)
|.. ..++.+++++|+.+++++++ .++ ++|+||||||.+|+.+|.++|++|+++|++++..... +.
T Consensus 113 s~~--~~~~~~~~a~dl~~ll~~l~------l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~-~~----- 178 (343)
T PRK08775 113 SLD--VPIDTADQADAIALLLDALG------IARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAH-PY----- 178 (343)
T ss_pred CCC--CCCCHHHHHHHHHHHHHHcC------CCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCC-HH-----
Confidence 852 35788999999999999997 544 5799999999999999999999999999998743110 00
Q ss_pred CchhhhhHHHHhhh--c-c---Cchh-----hHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHH---HHhccCC
Q 017180 216 SSMETRYGLLRGTL--R-A---PGVG-----WMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYA---LTKRKGA 281 (376)
Q Consensus 216 ~~~~~~~~~~~~~~--~-~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 281 (376)
............ . . .... ....... .....+...+..................... .......
T Consensus 179 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 255 (343)
T PRK08775 179 --AAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSY-RTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTP 255 (343)
T ss_pred --HHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHc-CCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcC
Confidence 000000000000 0 0 0000 0000000 0011111111100000000001111111110 0000111
Q ss_pred CchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc-CCceEEEeCC-C-CCCCCCChH
Q 017180 282 RYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK-GVTKFVEVPG-A-LLPQEEYPA 358 (376)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~-~-H~~~~e~pe 358 (376)
...+..+...... ....+.+| ++|+|+|+|++|.+++.+..+.+.+.. ++++++++++ + |++++|+|+
T Consensus 256 ~~~~~~~~~~~~~-------~~~~l~~I--~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe 326 (343)
T PRK08775 256 VNAYLRLSESIDL-------HRVDPEAI--RVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETD 326 (343)
T ss_pred hhHHHHHHHHHhh-------cCCChhcC--CCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHH
Confidence 1111111110000 01125677 999999999999999998888887766 7899999984 6 999999999
Q ss_pred HHHHHHHHHHHhhcC
Q 017180 359 MVAQELYQFLQQTFE 373 (376)
Q Consensus 359 ~~~~~i~~fl~~~~~ 373 (376)
+|++.|.+||.+..+
T Consensus 327 ~~~~~l~~FL~~~~~ 341 (343)
T PRK08775 327 RIDAILTTALRSTGE 341 (343)
T ss_pred HHHHHHHHHHHhccc
Confidence 999999999988754
No 28
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.97 E-value=1e-28 Score=225.60 Aligned_cols=252 Identities=19% Similarity=0.290 Sum_probs=169.0
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFV 153 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l 153 (376)
+.+++|...|+++ +++|||+||++ ++...|..+...|.+ +|+|+++|+||||.|.......+.+++++++
T Consensus 118 ~~~i~~~~~g~~~---~~~vl~~HG~~--~~~~~~~~~~~~l~~-----~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~ 187 (371)
T PRK14875 118 GRTVRYLRLGEGD---GTPVVLIHGFG--GDLNNWLFNHAALAA-----GRPVIALDLPGHGASSKAVGAGSLDELAAAV 187 (371)
T ss_pred CcEEEEecccCCC---CCeEEEECCCC--CccchHHHHHHHHhc-----CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHH
Confidence 6778898888654 67899999999 999999999999988 7999999999999997555678899999999
Q ss_pred HHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCc
Q 017180 154 VDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPG 233 (376)
Q Consensus 154 ~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (376)
.++++.++ ..+++++|||+||.+++.+|.++|+++.++|+++|..... ... ..+...+....
T Consensus 188 ~~~~~~~~------~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~--~~~---------~~~~~~~~~~~- 249 (371)
T PRK14875 188 LAFLDALG------IERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGP--EIN---------GDYIDGFVAAE- 249 (371)
T ss_pred HHHHHhcC------CccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCc--ccc---------hhHHHHhhccc-
Confidence 99999986 6789999999999999999999999999999998743111 000 00000000000
Q ss_pred hhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCC
Q 017180 234 VGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKL 313 (376)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 313 (376)
....+..++. ..+.+........................+..+............+....+.++ +|
T Consensus 250 -----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~ 315 (371)
T PRK14875 250 -----------SRRELKPVLE-LLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASL--AI 315 (371)
T ss_pred -----------chhHHHHHHH-HHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcC--CC
Confidence 0000000010 011111122222222222111111111111111111111111122355567788 99
Q ss_pred cEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 314 PLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 314 Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
|+|+++|++|.+++.+..+.+. +++++.+++++ |++++++|+++++.|.+||++
T Consensus 316 Pvlii~g~~D~~vp~~~~~~l~---~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 316 PVLVIWGEQDRIIPAAHAQGLP---DGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred CEEEEEECCCCccCHHHHhhcc---CCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 9999999999999987765543 46889999988 999999999999999999975
No 29
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.97 E-value=7.6e-29 Score=212.71 Aligned_cols=238 Identities=12% Similarity=0.079 Sum_probs=151.0
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCc
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESD 170 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 170 (376)
++|||+||++ ++...|+.++..|.+ +|+|+++|+||||.|+.. ..++.+++++++.+++ .++
T Consensus 5 ~~iv~~HG~~--~~~~~~~~~~~~l~~-----~~~vi~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~----------~~~ 66 (245)
T TIGR01738 5 VHLVLIHGWG--MNAEVFRCLDEELSA-----HFTLHLVDLPGHGRSRGF-GPLSLADAAEAIAAQA----------PDP 66 (245)
T ss_pred ceEEEEcCCC--CchhhHHHHHHhhcc-----CeEEEEecCCcCccCCCC-CCcCHHHHHHHHHHhC----------CCC
Confidence 7899999999 999999999999988 899999999999998754 3467777766665432 357
Q ss_pred EEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHH
Q 017180 171 LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQ 250 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (376)
++++||||||.+++.+|.++|++++++|++++........... ...... ....+.. .+.. .....+.
T Consensus 67 ~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~-~~~~~~---~~~~~~~------~~~~---~~~~~~~ 133 (245)
T TIGR01738 67 AIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWP-EGIKPD---VLTGFQQ------QLSD---DYQRTIE 133 (245)
T ss_pred eEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCccc-ccCCHH---HHHHHHH------Hhhh---hHHHHHH
Confidence 9999999999999999999999999999998743110000000 000000 0000000 0000 0000111
Q ss_pred HHHHhcccCCCCCCChHHHHHHHHHHhccCCC--chhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCH
Q 017180 251 SQYKSHVYSNPDNVTPGIVESRYALTKRKGAR--YVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSK 328 (376)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~ 328 (376)
.+........ ....+............... ......+...... +....+.++ ++|+++|+|++|.+++.
T Consensus 134 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~i--~~Pvlii~g~~D~~~~~ 204 (245)
T TIGR01738 134 RFLALQTLGT--PTARQDARALKQTLLARPTPNVQVLQAGLEILATV-----DLRQPLQNI--SVPFLRLYGYLDGLVPA 204 (245)
T ss_pred HHHHHHHhcC--CccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcc-----cHHHHHhcC--CCCEEEEeecCCcccCH
Confidence 1111111110 11111111111111111100 1111111111111 145567788 99999999999999999
Q ss_pred HHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHH
Q 017180 329 AEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFL 368 (376)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl 368 (376)
+..+.+.+..+++++++++++ |++++|+|+++++.|.+|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 205 KVVPYLDKLAPHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred HHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 999989888999999999998 9999999999999999995
No 30
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=2e-28 Score=222.59 Aligned_cols=280 Identities=13% Similarity=0.057 Sum_probs=166.6
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchH-------------hHHHH----HHHHhhhCCcceEEEEeCCCCC-c
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEE-------------WRLVA----QDIVQRVGKVNWRATIVDWPGL-G 135 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~-------------~~~~~----~~L~~~~~~~~~~Vi~~D~~G~-G 135 (376)
|.+++|...|+.+.+.+|+|||+||++ ++... |..++ ..+.+ +|+||++|+||+ |
T Consensus 32 ~~~~~y~~~G~~~~~~~p~vvl~HG~~--~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~-----~~~vi~~Dl~G~~~ 104 (379)
T PRK00175 32 PVELAYETYGTLNADRSNAVLICHALT--GDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTD-----RYFVICSNVLGGCK 104 (379)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCcC--CchhhcccccccCCCCcchhhccCCCCccCcc-----ceEEEeccCCCCCC
Confidence 788999999964322268899999999 87764 66665 23355 899999999993 5
Q ss_pred CCCCCC--------------CCCCHHHHHHHHHHHHhCCCCCCCCCCCc-EEEEecchHHHHHHHHHHhCCCCcceEEEe
Q 017180 136 YSDRPK--------------MDYNADVMEKFVVDLINAPDSPVSSSESD-LVIFGGGHAATLTVRAAKKNLVKPTAIAAV 200 (376)
Q Consensus 136 ~S~~~~--------------~~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~ 200 (376)
.|+.+. ..++++++++++.+++++++ .++ ++++||||||.+++.+|.++|++|+++|++
T Consensus 105 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~ 178 (379)
T PRK00175 105 GSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALG------ITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVI 178 (379)
T ss_pred CCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhC------CCCceEEEEECHHHHHHHHHHHhChHhhhEEEEE
Confidence 554221 15899999999999999997 666 589999999999999999999999999999
Q ss_pred ccCCCCCCCcccCCCCch-hhhhHHHHhhhc-----------cCchhhHHhhh----hhccHHHHHHHHHhcccCCCC--
Q 017180 201 APTWAGPLPIVFGRDSSM-ETRYGLLRGTLR-----------APGVGWMMYNM----LVSNEKAIQSQYKSHVYSNPD-- 262 (376)
Q Consensus 201 ~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-- 262 (376)
++..... + ....+ ......+..... .+.......+. .......+...+.........
T Consensus 179 ~~~~~~~-~----~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~ 253 (379)
T PRK00175 179 ASSARLS-A----QNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPF 253 (379)
T ss_pred CCCcccC-H----HHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCcccccccccc
Confidence 8742110 0 00000 000011100000 00000000000 000011111111111110000
Q ss_pred CC-ChHHHHHHHH----HHhccCCCchhH---HHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHH
Q 017180 263 NV-TPGIVESRYA----LTKRKGARYVPA---AFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEAL 334 (376)
Q Consensus 263 ~~-~~~~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~ 334 (376)
.. .....+.+.. ..........+. ..+...........++.+.+++| ++|+|+|+|++|.+++++..+.+
T Consensus 254 ~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I--~~PtLvI~G~~D~~~p~~~~~~l 331 (379)
T PRK00175 254 GFDVEFQVESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARI--KARFLVVSFTSDWLFPPARSREI 331 (379)
T ss_pred CCCccchHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcC--CCCEEEEEECCccccCHHHHHHH
Confidence 00 0011111110 001011111111 11111000000001256788899 99999999999999999999999
Q ss_pred hcccCCc----eEEEeC-CC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 335 KGAKGVT----KFVEVP-GA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 335 ~~~~~~~----~~~~~~-~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
.+.++++ ++++++ ++ |++++|+|+++++.|.+||.+...
T Consensus 332 a~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 332 VDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAAR 376 (379)
T ss_pred HHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhhh
Confidence 8888776 777775 77 999999999999999999998754
No 31
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.96 E-value=1.7e-28 Score=221.62 Aligned_cols=277 Identities=16% Similarity=0.094 Sum_probs=162.4
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccch-----------HhHHHHH---HHHhhhCCcceEEEEeCCCC--CcCC
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVE-----------EWRLVAQ---DIVQRVGKVNWRATIVDWPG--LGYS 137 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~-----------~~~~~~~---~L~~~~~~~~~~Vi~~D~~G--~G~S 137 (376)
|.+|+|..+|+.+...+++|||+||++ ++.. .|+.++. .|... +|+||++|+|| ||.|
T Consensus 15 ~~~~~y~~~g~~~~~~~~~vll~Hg~~--~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~----~~~vi~~D~~G~~~g~s 88 (351)
T TIGR01392 15 DVRVAYETYGTLNAERSNAVLVCHALT--GDAHVAGYHDDGDPGWWDDLIGPGRAIDTD----RYFVVCSNVLGGCYGST 88 (351)
T ss_pred CceEEEEeccccCCCCCCEEEEcCCcC--cchhhcccCCCCCCCchhhccCCCCCcCCC----ceEEEEecCCCCCCCCC
Confidence 789999999964322257899999999 7553 4777652 44332 89999999999 5555
Q ss_pred CCC----C--------CCCCHHHHHHHHHHHHhCCCCCCCCCCCc-EEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 138 DRP----K--------MDYNADVMEKFVVDLINAPDSPVSSSESD-LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 138 ~~~----~--------~~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
... . ..++++++++++.+++++++ .++ ++++||||||.+++.+|.++|++|+++|++++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 89 GPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLG------IEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSA 162 (351)
T ss_pred CCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcC------CCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCC
Confidence 421 1 25889999999999999997 666 9999999999999999999999999999998742
Q ss_pred CCCCCcccCCCCchhhhhHHHHhhhcc----------CchhhHHhhhh----hccHHHHHHHHHhcccCCCCC----CCh
Q 017180 205 AGPLPIVFGRDSSMETRYGLLRGTLRA----------PGVGWMMYNML----VSNEKAIQSQYKSHVYSNPDN----VTP 266 (376)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~----~~~ 266 (376)
... +. . ..........+...... +.......... ......+...+.......... ...
T Consensus 163 ~~~-~~--~-~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 238 (351)
T TIGR01392 163 RHS-AW--C-IAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTR 238 (351)
T ss_pred cCC-HH--H-HHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCcc
Confidence 110 00 0 00000000000000000 00000000000 000111111111110000000 000
Q ss_pred HHHHHHH-----HHHhccCCCc--hhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccC
Q 017180 267 GIVESRY-----ALTKRKGARY--VPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG 339 (376)
Q Consensus 267 ~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~ 339 (376)
...+.+. .......... .....+.. .+......++.+.+++| ++|+|+|+|++|.++|++..+.+.+.++
T Consensus 239 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~-~d~~~~~~~~~~~l~~I--~~P~Lvi~G~~D~~~p~~~~~~~a~~i~ 315 (351)
T TIGR01392 239 FQVESYLRYQGDKFVDRFDANSYLYLTRALDT-HDLGRGRGSLTEALSRI--KAPFLVVSITSDWLFPPAESRELAKALP 315 (351)
T ss_pred chHHHHHHHHHHHHHhhcCcchHHHHHHHHHh-cCCcCCCCCHHHHHhhC--CCCEEEEEeCCccccCHHHHHHHHHHHh
Confidence 0011111 0111111100 11111111 01000012256788889 9999999999999999999999998888
Q ss_pred CceEE-----EeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 340 VTKFV-----EVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 340 ~~~~~-----~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
+.+++ +++++ |++++|+|++|++.|.+||+
T Consensus 316 ~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 316 AAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred hcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 87765 55677 99999999999999999984
No 32
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.96 E-value=8.4e-29 Score=215.07 Aligned_cols=259 Identities=15% Similarity=0.131 Sum_probs=162.3
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCCCHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEK 151 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~ 151 (376)
+|-+++|.+-+.. +|+|||+||++ .+...|..++..|.+. ||+|+++|+||||.|... ...++++++++
T Consensus 5 ~~~~~~~~~~~~~----~p~vvliHG~~--~~~~~w~~~~~~L~~~----g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~ 74 (273)
T PLN02211 5 NGEEVTDMKPNRQ----PPHFVLIHGIS--GGSWCWYKIRCLMENS----GYKVTCIDLKSAGIDQSDADSVTTFDEYNK 74 (273)
T ss_pred cccccccccccCC----CCeEEEECCCC--CCcCcHHHHHHHHHhC----CCEEEEecccCCCCCCCCcccCCCHHHHHH
Confidence 4777888773222 78899999999 9999999999999875 899999999999998633 33589999999
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
++.++++++. ..++++||||||||.+++.++.++|++|+++|++++.... ..+.....+......+......
T Consensus 75 ~l~~~i~~l~-----~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~ 146 (273)
T PLN02211 75 PLIDFLSSLP-----ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLK---LGFQTDEDMKDGVPDLSEFGDV 146 (273)
T ss_pred HHHHHHHhcC-----CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCC---CCCCHHHHHhccccchhhhccc
Confidence 9999999984 2478999999999999999999999999999999764210 0000000000000000000000
Q ss_pred -C-chhh-HH---hhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHH
Q 017180 232 -P-GVGW-MM---YNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQL 305 (376)
Q Consensus 232 -~-~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (376)
. .... .. .... -...... ...+. ..+++..... .....+.....+ .... ..+.
T Consensus 147 ~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~---~~~~~~~~~~-~~~~~~~~~~~~-------~~~~-----~~~~ 205 (273)
T PLN02211 147 YELGFGLGPDQPPTSAI-IKKEFRR----KILYQ---MSPQEDSTLA-AMLLRPGPILAL-------RSAR-----FEEE 205 (273)
T ss_pred eeeeeccCCCCCCceee-eCHHHHH----HHHhc---CCCHHHHHHH-HHhcCCcCcccc-------cccc-----cccc
Confidence 0 0000 00 0000 0000000 00111 1111111111 111111110000 0000 1111
Q ss_pred HhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCCCCCCCCChHHHHHHHHHHHHhh
Q 017180 306 FADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 306 ~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
..++. ++|+++|.|++|..+|++..+.+.+..+..+++.++.+|.+++++|+++++.|.++....
T Consensus 206 ~~~~~-~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 206 TGDID-KVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELESDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred ccccC-ccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEECCCCCccccCHHHHHHHHHHHHHHh
Confidence 22221 679999999999999999999999888888999998559999999999999999887654
No 33
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.96 E-value=1.5e-27 Score=209.74 Aligned_cols=263 Identities=13% Similarity=0.111 Sum_probs=158.1
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccc-hHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-C--CCCHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTV-EEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-M--DYNADVM 149 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~-~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~--~~~~~~~ 149 (376)
|.++.|...+.... +++|||+||++ ++. ..|..+...+.+. ||+|+++|+||||.|+.+. . .++.+.+
T Consensus 11 ~~~~~~~~~~~~~~--~~~vl~~hG~~--g~~~~~~~~~~~~l~~~----g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 82 (288)
T TIGR01250 11 GGYHLFTKTGGEGE--KIKLLLLHGGP--GMSHEYLENLRELLKEE----GREVIMYDQLGCGYSDQPDDSDELWTIDYF 82 (288)
T ss_pred CCeEEEEeccCCCC--CCeEEEEcCCC--CccHHHHHHHHHHHHhc----CCEEEEEcCCCCCCCCCCCcccccccHHHH
Confidence 55677877775432 67899999976 544 4455555666654 7999999999999998553 2 3889999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhh
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTL 229 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (376)
++++.+++++++ .++++++||||||.+++.+|..+|++++++|++++... .+.. ........ ..+
T Consensus 83 ~~~~~~~~~~~~------~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~--~~~~------~~~~~~~~-~~~ 147 (288)
T TIGR01250 83 VDELEEVREKLG------LDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDS--APEY------VKELNRLR-KEL 147 (288)
T ss_pred HHHHHHHHHHcC------CCcEEEEEeehHHHHHHHHHHhCccccceeeEeccccc--chHH------HHHHHHHH-hhc
Confidence 999999999986 67799999999999999999999999999999986321 0000 00000000 000
Q ss_pred ccCchhhHHhhhh----hccH---HHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhc--c-CCCCCcH
Q 017180 230 RAPGVGWMMYNML----VSNE---KAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTG--L-LDPVNSR 299 (376)
Q Consensus 230 ~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~ 299 (376)
.. .....+.... .... ..+....... .... ...+......... .....+..+... . .......
T Consensus 148 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 220 (288)
T TIGR01250 148 PP-EVRAAIKRCEASGDYDNPEYQEAVEVFYHHL-LCRT-RKWPEALKHLKSG----MNTNVYNIMQGPNEFTITGNLKD 220 (288)
T ss_pred Ch-hHHHHHHHHHhccCcchHHHHHHHHHHHHHh-hccc-ccchHHHHHHhhc----cCHHHHhcccCCccccccccccc
Confidence 00 0000000000 0000 0011000000 0000 0111111111000 000000000000 0 0000001
Q ss_pred HHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 300 EEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 300 ~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
.+..+.+.++ ++|+++++|++|.+ +++..+.+.+..+++++++++++ |++++|+|+++++.|.+||+
T Consensus 221 ~~~~~~l~~i--~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 221 WDITDKLSEI--KVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred cCHHHHhhcc--CCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 1244567788 99999999999985 56778888888899999999998 99999999999999999984
No 34
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=4.3e-27 Score=214.71 Aligned_cols=276 Identities=11% Similarity=0.081 Sum_probs=159.1
Q ss_pred eEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCC-H----HHHH
Q 017180 76 NIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYN-A----DVME 150 (376)
Q Consensus 76 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~-~----~~~~ 150 (376)
++++........ +|+|||+||++ .+...|...+..|.+ +|+|+++|+||||.|+.+...++ . +.++
T Consensus 93 ~~~~~~~~~~~~--~p~vvllHG~~--~~~~~~~~~~~~L~~-----~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~ 163 (402)
T PLN02894 93 FINTVTFDSKED--APTLVMVHGYG--ASQGFFFRNFDALAS-----RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFI 163 (402)
T ss_pred eEEEEEecCCCC--CCEEEEECCCC--cchhHHHHHHHHHHh-----CCEEEEECCCCCCCCCCCCcccccHHHHHHHHH
Confidence 555444332221 68999999999 888999999999988 79999999999999986643221 1 2356
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhh-hhHHHHhhh
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMET-RYGLLRGTL 229 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 229 (376)
+++.++++.++ .++++|+||||||.+++.+|.++|++|+++|+++|......+.... ..... ...+...++
T Consensus 164 ~~i~~~~~~l~------~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~ 235 (402)
T PLN02894 164 DSFEEWRKAKN------LSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKS--EWLTKFRATWKGAVL 235 (402)
T ss_pred HHHHHHHHHcC------CCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhH--HHHhhcchhHHHHHH
Confidence 67778888776 6689999999999999999999999999999998853211110000 00000 000000000
Q ss_pred ----ccCchhhHHhhhhhc-cHHHHHHHHHhcccC--CCCCCChHHH----HHHHHHHhccCCCchhHHHhhccCCCCCc
Q 017180 230 ----RAPGVGWMMYNMLVS-NEKAIQSQYKSHVYS--NPDNVTPGIV----ESRYALTKRKGARYVPAAFLTGLLDPVNS 298 (376)
Q Consensus 230 ----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (376)
............... ....+.......... .....+++.. +.................+...... . .
T Consensus 236 ~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 313 (402)
T PLN02894 236 NHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGA-F-A 313 (402)
T ss_pred HHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCch-h-h
Confidence 000000000100000 001111111110000 0001121111 1111111111111111112211110 0 1
Q ss_pred HHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhc-ccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 299 REEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKG-AKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 299 ~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
.......+.+| ++|+++|+|++|.+.+ ...+.+.+ ..+.+++++++++ |+++.|+|++|++.|.+|++..+.
T Consensus 314 ~~~~~~~l~~I--~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~ 387 (402)
T PLN02894 314 RKPLLESASEW--KVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLS 387 (402)
T ss_pred cchHhhhcccC--CCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhcc
Confidence 11245567788 9999999999998776 44444443 3346889999999 999999999999999999987654
No 35
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.96 E-value=9.8e-29 Score=209.34 Aligned_cols=225 Identities=18% Similarity=0.272 Sum_probs=151.8
Q ss_pred EEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHHHHHHHHHhCCCCCCCCCCCc
Q 017180 93 ILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVMEKFVVDLINAPDSPVSSSESD 170 (376)
Q Consensus 93 vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 170 (376)
|||+||++ ++...|..+++.|++ ||+|+++|+||||.|+.+. ..++.+++++++.+++++++ .++
T Consensus 1 vv~~hG~~--~~~~~~~~~~~~l~~-----~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~------~~~ 67 (228)
T PF12697_consen 1 VVFLHGFG--GSSESWDPLAEALAR-----GYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALG------IKK 67 (228)
T ss_dssp EEEE-STT--TTGGGGHHHHHHHHT-----TSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTT------TSS
T ss_pred eEEECCCC--CCHHHHHHHHHHHhC-----CCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccc------ccc
Confidence 79999999 999999999999975 9999999999999999654 46889999999999999997 588
Q ss_pred EEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHH
Q 017180 171 LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQ 250 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (376)
++++|||+||.+++.++.++|++|+++|+++|........ . ......++......... .. .....
T Consensus 68 ~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~---~~------~~~~~ 132 (228)
T PF12697_consen 68 VILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSP----S--RSFGPSFIRRLLAWRSR---SL------RRLAS 132 (228)
T ss_dssp EEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHH----C--HHHHHHHHHHHHHHHHH---HH------HHHHH
T ss_pred ccccccccccccccccccccccccccceeecccccccccc----c--ccccchhhhhhhhcccc---cc------ccccc
Confidence 9999999999999999999999999999999853100000 0 00000111111100000 00 00000
Q ss_pred HHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHH
Q 017180 251 SQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAE 330 (376)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~ 330 (376)
..+... ...+........ ....+..+.... ....++...++++ ++|+++++|++|.+++.+.
T Consensus 133 ~~~~~~-------~~~~~~~~~~~~-----~~~~~~~~~~~~----~~~~~~~~~~~~~--~~pvl~i~g~~D~~~~~~~ 194 (228)
T PF12697_consen 133 RFFYRW-------FDGDEPEDLIRS-----SRRALAEYLRSN----LWQADLSEALPRI--KVPVLVIHGEDDPIVPPES 194 (228)
T ss_dssp HHHHHH-------HTHHHHHHHHHH-----HHHHHHHHHHHH----HHHHHHHHHHHGS--SSEEEEEEETTSSSSHHHH
T ss_pred cccccc-------cccccccccccc-----cccccccccccc----ccccccccccccc--CCCeEEeecCCCCCCCHHH
Confidence 000000 011111111100 000001111000 0122356678888 9999999999999999999
Q ss_pred HHHHhcccCCceEEEeCCC-CCCCCCChHHHHHH
Q 017180 331 MEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQE 363 (376)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~ 363 (376)
.+.+.+..+++++++++++ |++++|+|++++++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 195 AEELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred HHHHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 9999988899999999998 99999999999864
No 36
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.96 E-value=1.5e-27 Score=205.04 Aligned_cols=246 Identities=13% Similarity=0.146 Sum_probs=156.8
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHHHH-HHHHHhCCCCCCCCC
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVMEKF-VVDLINAPDSPVSSS 167 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~~~-l~~~l~~l~~~~~~~ 167 (376)
|+|||+||++ ++...|..+++.|++ +|+|+++|+||||.|+.+. ..++.++++++ +..+++.++
T Consensus 2 ~~vv~~hG~~--~~~~~~~~~~~~L~~-----~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 68 (251)
T TIGR03695 2 PVLVFLHGFL--GSGADWQALIELLGP-----HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLG------ 68 (251)
T ss_pred CEEEEEcCCC--CchhhHHHHHHHhcc-----cCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcC------
Confidence 6799999999 999999999999985 8999999999999998543 46788888888 777888875
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHH
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEK 247 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (376)
.++++++|||+||.+++.+|.++|++|++++++++........ ..... ..........+... ....
T Consensus 69 ~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~--------~~~~~----~~~~~~~~~~~~~~--~~~~ 134 (251)
T TIGR03695 69 IEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEE--------ERAAR----RQNDEQLAQRFEQE--GLEA 134 (251)
T ss_pred CCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchH--------hhhhh----hhcchhhhhHHHhc--CccH
Confidence 6789999999999999999999999999999998742110000 00000 00000000000000 0011
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCC
Q 017180 248 AIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRS 327 (376)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~ 327 (376)
....+.....+......+++.............. ......+...... ........+.++ ++|+++|+|++|..++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~--~~P~l~i~g~~D~~~~ 209 (251)
T TIGR03695 135 FLDDWYQQPLFASQKNLPPEQRQALRAKRLANNP-EGLAKMLRATGLG--KQPSLWPKLQAL--TIPVLYLCGEKDEKFV 209 (251)
T ss_pred HHHHHhcCceeeecccCChHHhHHHHHhcccccc-hHHHHHHHHhhhh--cccchHHHhhCC--CCceEEEeeCcchHHH
Confidence 1111111111111111222222222221111111 1111111110000 011134556778 9999999999998764
Q ss_pred HHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 328 KAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
+..+.+.+..+++++++++++ |++++|+|+++++.|.+||+
T Consensus 210 -~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 210 -QIAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred -HHHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 566778888899999999997 99999999999999999983
No 37
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=3.6e-27 Score=213.45 Aligned_cols=265 Identities=11% Similarity=0.130 Sum_probs=165.1
Q ss_pred eecCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHH
Q 017180 69 KFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNAD 147 (376)
Q Consensus 69 ~~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~ 147 (376)
..+.+|..++|..+.+...+++++|||+||++ ++...|..++..|.+. ||+|+++|+||||.|+... ...+.+
T Consensus 115 ~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~--~~~~~~~~~a~~L~~~----Gy~V~~~D~rGhG~S~~~~~~~~~~~ 188 (395)
T PLN02652 115 FYGARRNALFCRSWAPAAGEMRGILIIIHGLN--EHSGRYLHFAKQLTSC----GFGVYAMDWIGHGGSDGLHGYVPSLD 188 (395)
T ss_pred EECCCCCEEEEEEecCCCCCCceEEEEECCch--HHHHHHHHHHHHHHHC----CCEEEEeCCCCCCCCCCCCCCCcCHH
Confidence 34556778888888764333357899999999 9989999999999876 9999999999999998543 345788
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCC---CCcceEEEeccCCCCCCCcccCCCCchhhhhHH
Q 017180 148 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNL---VKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGL 224 (376)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p---~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (376)
.+.+|+.++++.+.... ...+++++||||||.+++.++. +| ++++++|+.+|..... + . .. ....
T Consensus 189 ~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~-~---~----~~-~~~~ 256 (395)
T PLN02652 189 YVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVK-P---A----HP-IVGA 256 (395)
T ss_pred HHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccc-c---c----hH-HHHH
Confidence 88999999988875221 2357999999999999998765 55 4799999998843100 0 0 00 0000
Q ss_pred HHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCc-hh-HHHhhccCCCCCcHHHH
Q 017180 225 LRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARY-VP-AAFLTGLLDPVNSREEF 302 (376)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~ 302 (376)
.... ...+ . +.. . .............+++..... ...+.... .. ......... ..+.+
T Consensus 257 ~~~l----------~~~~-~-p~~-~-~~~~~~~~~~~s~~~~~~~~~---~~dp~~~~g~i~~~~~~~~~~---~~~~l 316 (395)
T PLN02652 257 VAPI----------FSLV-A-PRF-Q-FKGANKRGIPVSRDPAALLAK---YSDPLVYTGPIRVRTGHEILR---ISSYL 316 (395)
T ss_pred HHHH----------HHHh-C-CCC-c-ccCcccccCCcCCCHHHHHHH---hcCCCcccCCchHHHHHHHHH---HHHHH
Confidence 0000 0000 0 000 0 000000000000011111110 11110000 00 000000000 01113
Q ss_pred HHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc--CCceEEEeCCC-CCCCCC-ChHHHHHHHHHHHHhhcC
Q 017180 303 LQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK--GVTKFVEVPGA-LLPQEE-YPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 303 ~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~-H~~~~e-~pe~~~~~i~~fl~~~~~ 373 (376)
.+.+.++ ++|+|++||++|.+++.+..+.+.+.. +++++++++++ |.++.| .++++.+.|.+||.+..+
T Consensus 317 ~~~L~~I--~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 317 TRNFKSV--TVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred HhhcccC--CCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 4556778 999999999999999999999886553 35789999999 998666 799999999999997653
No 38
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.95 E-value=5.8e-26 Score=197.92 Aligned_cols=270 Identities=12% Similarity=0.103 Sum_probs=168.6
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC--CCCCCCCHHH
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD--RPKMDYNADV 148 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~--~~~~~~~~~~ 148 (376)
..+|.+++|..+-...+. ..+||++||++ .+...|..++..|..+ ||.|+++|+||||.|. ......++++
T Consensus 16 ~~d~~~~~~~~~~~~~~~-~g~Vvl~HG~~--Eh~~ry~~la~~l~~~----G~~V~~~D~RGhG~S~r~~rg~~~~f~~ 88 (298)
T COG2267 16 GADGTRLRYRTWAAPEPP-KGVVVLVHGLG--EHSGRYEELADDLAAR----GFDVYALDLRGHGRSPRGQRGHVDSFAD 88 (298)
T ss_pred cCCCceEEEEeecCCCCC-CcEEEEecCch--HHHHHHHHHHHHHHhC----CCEEEEecCCCCCCCCCCCcCCchhHHH
Confidence 445889999888765431 25799999999 9999999999999997 9999999999999996 3334455889
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
+.+|+..+++....+. ...+++++||||||.|++.++.+++..++++||.+|...... ........ .
T Consensus 89 ~~~dl~~~~~~~~~~~--~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~---------~~~~~~~~--~ 155 (298)
T COG2267 89 YVDDLDAFVETIAEPD--PGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG---------AILRLILA--R 155 (298)
T ss_pred HHHHHHHHHHHHhccC--CCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh---------hHHHHHHH--H
Confidence 9999999998875321 368999999999999999999999999999999999642110 00000000 0
Q ss_pred hccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHh-ccCCCc--hhHHHhhccCCCCCcHHHHHHH
Q 017180 229 LRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTK-RKGARY--VPAAFLTGLLDPVNSREEFLQL 305 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 305 (376)
................ . . . ......+....+++..+.+..... ..+... ++......... .....
T Consensus 156 ~~~~~~~~~~p~~~~~-~-~---~-~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~------~~~~~ 223 (298)
T COG2267 156 LALKLLGRIRPKLPVD-S-N---L-LEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRV------PALRD 223 (298)
T ss_pred HhcccccccccccccC-c-c---c-ccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcc------cchhc
Confidence 0000000000000000 0 0 0 000000001112222222221111 111111 11111111000 01222
Q ss_pred HhcccCCCcEEEEEeCCCCCCC-HHHHHHHh--cccCCceEEEeCCC-CCCCCCC-h--HHHHHHHHHHHHhhcCC
Q 017180 306 FADLEGKLPLLVVSTEGSPRRS-KAEMEALK--GAKGVTKFVEVPGA-LLPQEEY-P--AMVAQELYQFLQQTFEP 374 (376)
Q Consensus 306 ~~~i~~~~Pvlii~G~~D~~~~-~~~~~~~~--~~~~~~~~~~~~~~-H~~~~e~-p--e~~~~~i~~fl~~~~~~ 374 (376)
...+ ++|+|+++|++|.+++ .+...++. ...+++++++++++ |-++.|. . +++.+.+.+|+.+....
T Consensus 224 ~~~~--~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~~ 297 (298)
T COG2267 224 APAI--ALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALPS 297 (298)
T ss_pred cccc--cCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhccC
Confidence 3445 8999999999999999 56655553 34667899999999 9976664 5 78999999999987643
No 39
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.95 E-value=3.6e-26 Score=238.54 Aligned_cols=270 Identities=16% Similarity=0.191 Sum_probs=167.5
Q ss_pred eecCCcee--EEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-----
Q 017180 69 KFKENSIN--IYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK----- 141 (376)
Q Consensus 69 ~~~~~g~~--l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~----- 141 (376)
+...+|.+ ++|...|..+. +++|||+||++ ++...|..++..|.+ +|+|+++|+||||.|+.+.
T Consensus 1350 ~v~~~~~~~~i~~~~~G~~~~--~~~vVllHG~~--~s~~~w~~~~~~L~~-----~~rVi~~Dl~G~G~S~~~~~~~~~ 1420 (1655)
T PLN02980 1350 RVDVDGFSCLIKVHEVGQNAE--GSVVLFLHGFL--GTGEDWIPIMKAISG-----SARCISIDLPGHGGSKIQNHAKET 1420 (1655)
T ss_pred EEccCceEEEEEEEecCCCCC--CCeEEEECCCC--CCHHHHHHHHHHHhC-----CCEEEEEcCCCCCCCCCccccccc
Confidence 44444543 45666665322 67999999999 999999999999988 7999999999999997432
Q ss_pred ---CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCch
Q 017180 142 ---MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSM 218 (376)
Q Consensus 142 ---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~ 218 (376)
..++++.+++++.+++++++ .++++|+||||||.+++.+|.++|++|+++|++++... .. .
T Consensus 1421 ~~~~~~si~~~a~~l~~ll~~l~------~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~--~~---~----- 1484 (1655)
T PLN02980 1421 QTEPTLSVELVADLLYKLIEHIT------PGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPG--LK---D----- 1484 (1655)
T ss_pred cccccCCHHHHHHHHHHHHHHhC------CCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCc--cC---c-----
Confidence 35789999999999999986 67899999999999999999999999999999986321 00 0
Q ss_pred hhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCc
Q 017180 219 ETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNS 298 (376)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (376)
... ........ ......+... ........++...... .....+...+........ .........+...... .
T Consensus 1485 ~~~-~~~~~~~~-~~~~~~l~~~--g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~--~ 1556 (1655)
T PLN02980 1485 EVA-RKIRSAKD-DSRARMLIDH--GLEIFLENWYSGELWK-SLRNHPHFNKIVASRLLH-KDVPSLAKLLSDLSIG--R 1556 (1655)
T ss_pred hHH-HHHHhhhh-hHHHHHHHhh--hHHHHHHHhccHHHhh-hhccCHHHHHHHHHHHhc-CCHHHHHHHHHHhhhc--c
Confidence 000 00000000 0000000000 0001111111000000 000111111111111111 1111111111111000 1
Q ss_pred HHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCC------------ceEEEeCCC-CCCCCCChHHHHHHHH
Q 017180 299 REEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGV------------TKFVEVPGA-LLPQEEYPAMVAQELY 365 (376)
Q Consensus 299 ~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~------------~~~~~~~~~-H~~~~e~pe~~~~~i~ 365 (376)
..++.+.++++ ++|+|+|+|++|..++ +..+++.+.+++ +++++++++ |++++|+|+++++.|.
T Consensus 1557 ~~dl~~~L~~I--~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~ 1633 (1655)
T PLN02980 1557 QPSLWEDLKQC--DTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALR 1633 (1655)
T ss_pred cchHHHHHhhC--CCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHH
Confidence 11245678888 9999999999999875 555556554443 589999999 9999999999999999
Q ss_pred HHHHhhcCC
Q 017180 366 QFLQQTFEP 374 (376)
Q Consensus 366 ~fl~~~~~~ 374 (376)
+||.+....
T Consensus 1634 ~FL~~~~~~ 1642 (1655)
T PLN02980 1634 KFLTRLHNS 1642 (1655)
T ss_pred HHHHhcccc
Confidence 999987654
No 40
>PRK05855 short chain dehydrogenase; Validated
Probab=99.95 E-value=3.9e-27 Score=227.97 Aligned_cols=268 Identities=12% Similarity=0.119 Sum_probs=158.4
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVME 150 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~ 150 (376)
+|.+++|...|++. +|+|||+||++ ++...|+.+++.|.+ +|+|+++|+||||.|+.+. ..++.++++
T Consensus 11 ~g~~l~~~~~g~~~---~~~ivllHG~~--~~~~~w~~~~~~L~~-----~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a 80 (582)
T PRK05855 11 DGVRLAVYEWGDPD---RPTVVLVHGYP--DNHEVWDGVAPLLAD-----RFRVVAYDVRGAGRSSAPKRTAAYTLARLA 80 (582)
T ss_pred CCEEEEEEEcCCCC---CCeEEEEcCCC--chHHHHHHHHHHhhc-----ceEEEEecCCCCCCCCCCCcccccCHHHHH
Confidence 48899999998654 78999999999 999999999999976 8999999999999998543 468999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccCCCCCCCcccCCCC---chhhhhHHH
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPTWAGPLPIVFGRDS---SMETRYGLL 225 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~~~~~~~~~~~~~~---~~~~~~~~~ 225 (376)
+|+.+++++++ ..++++|+||||||.+++.++.+ .+.++..++.+++.............. .........
T Consensus 81 ~dl~~~i~~l~-----~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (582)
T PRK05855 81 DDFAAVIDAVS-----PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARAL 155 (582)
T ss_pred HHHHHHHHHhC-----CCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHH
Confidence 99999999986 34569999999999999988775 234444444443211000000000000 000000000
Q ss_pred Hhhhc--------cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCC
Q 017180 226 RGTLR--------APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVN 297 (376)
Q Consensus 226 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (376)
..... .+.......... ....+..... .. ...... .................+........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~- 224 (582)
T PRK05855 156 GQLLRSWYIYLFHLPVLPELLWRLG--LGRAWPRLLR-RV----EGTPVD---PIPTQTTLSDGAHGVKLYRANMIRSL- 224 (582)
T ss_pred HHHhhhHHHHHHhCCCCcHHHhccc--hhhHHHHhhh-hc----cCCCcc---hhhhhhhhccccchHHHHHhhhhhhh-
Confidence 00000 000000000000 0000000000 00 000000 00000000000000011100000000
Q ss_pred cHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCCCCCCCCChHHHHHHHHHHHHhhc
Q 017180 298 SREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 298 ~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
.......+ ++|+++|+|++|.+++.+..+.+.+..++.++++++++|+++.|+|+++++.|.+|+.+..
T Consensus 225 ----~~~~~~~~--~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 225 ----SRPRERYT--DVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIKAGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred ----ccCccCCc--cCceEEEEeCCCcccCHHHhccccccCCcceEEEccCCCcchhhChhHHHHHHHHHHHhcc
Confidence 11113346 8999999999999999999998888888888888876699999999999999999998754
No 41
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.95 E-value=9.4e-26 Score=187.03 Aligned_cols=261 Identities=13% Similarity=0.120 Sum_probs=166.8
Q ss_pred ceeEEEEecccCC-CCCCCcEEEecCCCCCccc-hHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHHHH
Q 017180 74 SINIYYEKHERES-PDPSKNILMIPTISDVSTV-EEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVME 150 (376)
Q Consensus 74 g~~l~y~~~g~~~-~~~~~~vvllHG~~~~~~~-~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~~~ 150 (376)
|.++++..+-+.+ .++...|+++||++ ... ..|..++..|+.. ||.|+++|++|||.|+.-. ..-+++..+
T Consensus 37 G~~lft~~W~p~~~~~pr~lv~~~HG~g--~~~s~~~~~~a~~l~~~----g~~v~a~D~~GhG~SdGl~~yi~~~d~~v 110 (313)
T KOG1455|consen 37 GAKLFTQSWLPLSGTEPRGLVFLCHGYG--EHSSWRYQSTAKRLAKS----GFAVYAIDYEGHGRSDGLHAYVPSFDLVV 110 (313)
T ss_pred CCEeEEEecccCCCCCCceEEEEEcCCc--ccchhhHHHHHHHHHhC----CCeEEEeeccCCCcCCCCcccCCcHHHHH
Confidence 7788887776633 24455788889999 765 7888899999997 9999999999999999433 456788889
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
+|+..+.+....+..-.+.+.+++||||||+|++.++.+.|...+++|+++|...- .+.+ ..
T Consensus 111 ~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i-~~~~-----------------kp 172 (313)
T KOG1455|consen 111 DDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKI-SEDT-----------------KP 172 (313)
T ss_pred HHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeeccccc-CCcc-----------------CC
Confidence 99998887644332335778999999999999999999999999999999984310 0000 00
Q ss_pred cCchhhHHhhhhhccHHHHHHH--HHhcccCCCCCCChHHHHHHHH-HHhccCCCc--hhHHHhhccCCCCCcHHHHHHH
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQ--YKSHVYSNPDNVTPGIVESRYA-LTKRKGARY--VPAAFLTGLLDPVNSREEFLQL 305 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 305 (376)
.+..... ...+ ...+..+ ....-..+...-+++..+.... +....+... ....++. ...++.+.
T Consensus 173 ~p~v~~~-l~~l---~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr-------~~~~le~~ 241 (313)
T KOG1455|consen 173 HPPVISI-LTLL---SKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLR-------VTADLEKN 241 (313)
T ss_pred CcHHHHH-HHHH---HHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHH-------HHHHHHHh
Confidence 0000000 0000 0000000 0000000000011111111111 111111111 1111121 12337778
Q ss_pred HhcccCCCcEEEEEeCCCCCCCHHHHHHHhcc--cCCceEEEeCCC-CCCCC----CChHHHHHHHHHHHHhh
Q 017180 306 FADLEGKLPLLVVSTEGSPRRSKAEMEALKGA--KGVTKFVEVPGA-LLPQE----EYPAMVAQELYQFLQQT 371 (376)
Q Consensus 306 ~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~-H~~~~----e~pe~~~~~i~~fl~~~ 371 (376)
+.++ ++|.+|+||++|.++.++..+.+.+. ..+.++..+||+ |.++. |+-+.+...|.+||++.
T Consensus 242 l~~v--tvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 242 LNEV--TVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred cccc--cccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 8888 99999999999999999999998654 457899999999 99775 34467888899999863
No 42
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.94 E-value=8.9e-27 Score=180.18 Aligned_cols=243 Identities=18% Similarity=0.195 Sum_probs=167.4
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK 151 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 151 (376)
.+|.+|+|...|.+ ...|+++.|.-+ +....|.+++..|.+.+ .++|++.|.||||.|.+|......+.+.+
T Consensus 28 vng~ql~y~~~G~G----~~~iLlipGalG-s~~tDf~pql~~l~k~l---~~TivawDPpGYG~SrPP~Rkf~~~ff~~ 99 (277)
T KOG2984|consen 28 VNGTQLGYCKYGHG----PNYILLIPGALG-SYKTDFPPQLLSLFKPL---QVTIVAWDPPGYGTSRPPERKFEVQFFMK 99 (277)
T ss_pred ecCceeeeeecCCC----CceeEecccccc-cccccCCHHHHhcCCCC---ceEEEEECCCCCCCCCCCcccchHHHHHH
Confidence 34889999999986 346888888540 55678988888887752 49999999999999998887777766555
Q ss_pred H---HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 152 F---VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 152 ~---l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
| ..+++++|. .+++.++|+|-||..|+.+|+++++.|.++|+.+...
T Consensus 100 Da~~avdLM~aLk------~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~a------------------------ 149 (277)
T KOG2984|consen 100 DAEYAVDLMEALK------LEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAA------------------------ 149 (277)
T ss_pred hHHHHHHHHHHhC------CCCeeEeeecCCCeEEEEeeccChhhhhhheeecccc------------------------
Confidence 5 457788886 8899999999999999999999999999999886531
Q ss_pred hccCchhhHHhhhhhccHHHHHHHHHh--cccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHH
Q 017180 229 LRAPGVGWMMYNMLVSNEKAIQSQYKS--HVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLF 306 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (376)
.....+...++.+ ++.-+ +..+ ..+. ..+..+.....+....+ +...+.. .-+.. -.+-.+
T Consensus 150 -yvn~~~~ma~kgi---Rdv~k-Ws~r~R~P~e--~~Yg~e~f~~~wa~wvD-----~v~qf~~-~~dG~----fCr~~l 212 (277)
T KOG2984|consen 150 -YVNHLGAMAFKGI---RDVNK-WSARGRQPYE--DHYGPETFRTQWAAWVD-----VVDQFHS-FCDGR----FCRLVL 212 (277)
T ss_pred -eecchhHHHHhch---HHHhh-hhhhhcchHH--HhcCHHHHHHHHHHHHH-----HHHHHhh-cCCCc----hHhhhc
Confidence 0000111111111 01000 0000 0000 01112222211111110 0001111 11111 045578
Q ss_pred hcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 307 ADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 307 ~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
+++ +||+||+||++|++++......+....+.+++.+++.| |..++..+++|++.+.+||++.
T Consensus 213 p~v--kcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 213 PQV--KCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred ccc--cCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 888 99999999999999999999888888899999999999 9999999999999999999875
No 43
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.94 E-value=2.2e-25 Score=197.61 Aligned_cols=115 Identities=15% Similarity=0.163 Sum_probs=94.5
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVME 150 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~ 150 (376)
+|.+++|...|.++ +++|||+||++ ++...+ .+...+... +|+|+++|+||||.|+.+. ..++.++++
T Consensus 13 ~~~~l~y~~~g~~~---~~~lvllHG~~--~~~~~~-~~~~~~~~~----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 82 (306)
T TIGR01249 13 DNHQLYYEQSGNPD---GKPVVFLHGGP--GSGTDP-GCRRFFDPE----TYRIVLFDQRGCGKSTPHACLEENTTWDLV 82 (306)
T ss_pred CCcEEEEEECcCCC---CCEEEEECCCC--CCCCCH-HHHhccCcc----CCEEEEECCCCCCCCCCCCCcccCCHHHHH
Confidence 47889999988654 67899999988 554433 333344333 7999999999999998543 356788999
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
+++..++++++ .++++++||||||.+++.++.++|++|+++|++++.
T Consensus 83 ~dl~~l~~~l~------~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (306)
T TIGR01249 83 ADIEKLREKLG------IKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIF 129 (306)
T ss_pred HHHHHHHHHcC------CCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccc
Confidence 99999999986 678999999999999999999999999999999864
No 44
>PLN02511 hydrolase
Probab=99.93 E-value=3.4e-25 Score=201.48 Aligned_cols=247 Identities=10% Similarity=0.103 Sum_probs=143.9
Q ss_pred CCcEEEecCCCCCccch--HhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVE--EWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~--~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
+|+||++||++ ++.. .+..++..+.+. ||+|+++|+||||.|+.....+....+.+|+.+++++++... .
T Consensus 100 ~p~vvllHG~~--g~s~~~y~~~~~~~~~~~----g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~ 171 (388)
T PLN02511 100 APVLILLPGLT--GGSDDSYVRHMLLRARSK----GWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRY--P 171 (388)
T ss_pred CCEEEEECCCC--CCCCCHHHHHHHHHHHHC----CCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHC--C
Confidence 67899999997 4432 335566655554 999999999999999854333334566778888887775322 2
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCC--cceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhcc
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVK--PTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSN 245 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~--v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (376)
..+++++||||||.+++.++.++|++ |.+++++++.+.. . .....+...+. ......+...+
T Consensus 172 ~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l--~----------~~~~~~~~~~~-~~y~~~~~~~l--- 235 (388)
T PLN02511 172 SANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDL--V----------IADEDFHKGFN-NVYDKALAKAL--- 235 (388)
T ss_pred CCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCH--H----------HHHHHHhccHH-HHHHHHHHHHH---
Confidence 46899999999999999999999987 8888888763210 0 00000000000 00000000000
Q ss_pred HHHHHHHHHhcccCC-CCCCChHH------HHHHHHHHhccC-CCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEE
Q 017180 246 EKAIQSQYKSHVYSN-PDNVTPGI------VESRYALTKRKG-ARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLV 317 (376)
Q Consensus 246 ~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvli 317 (376)
...+.. . ...+.. ...++... +..+.+...... .......++.. ......+++| ++|+|+
T Consensus 236 ~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~--------~s~~~~L~~I--~vPtLi 303 (388)
T PLN02511 236 RKIFAK-H-ALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSN--------SSSSDSIKHV--RVPLLC 303 (388)
T ss_pred HHHHHH-H-HHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHH--------cCchhhhccC--CCCeEE
Confidence 000000 0 000000 00011110 001111111110 00000111100 0023467788 999999
Q ss_pred EEeCCCCCCCHHHH-HHHhcccCCceEEEeCCC-CCCCCCChHH------HHHHHHHHHHhhc
Q 017180 318 VSTEGSPRRSKAEM-EALKGAKGVTKFVEVPGA-LLPQEEYPAM------VAQELYQFLQQTF 372 (376)
Q Consensus 318 i~G~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~-H~~~~e~pe~------~~~~i~~fl~~~~ 372 (376)
|+|++|++++.+.. ..+.+..++++++++++| |+.++|.|+. +.+.|.+||....
T Consensus 304 I~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 304 IQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALE 366 (388)
T ss_pred EEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHH
Confidence 99999999987654 345677899999999998 9999999976 4899999998753
No 45
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.93 E-value=3e-24 Score=191.47 Aligned_cols=263 Identities=9% Similarity=0.046 Sum_probs=152.1
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccch-Hh-------------------------HHHHHHHHhhhCCcceEE
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVE-EW-------------------------RLVAQDIVQRVGKVNWRA 126 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~-~~-------------------------~~~~~~L~~~~~~~~~~V 126 (376)
+|.+|++..+...++ +.+||++||++ .+.. .+ ..+++.|.++ ||+|
T Consensus 6 ~g~~l~~~~~~~~~~--kg~v~i~HG~~--eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~----G~~V 77 (332)
T TIGR01607 6 DGLLLKTYSWIVKNA--IGIIVLIHGLK--SHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKN----GYSV 77 (332)
T ss_pred CCCeEEEeeeeccCC--eEEEEEECCCc--hhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHC----CCcE
Confidence 578888887765433 56899999999 7664 21 3568888886 9999
Q ss_pred EEeCCCCCcCCCCCC----CCCCHHHHHHHHHHHHhCCCCC------------------CCCCCCcEEEEecchHHHHHH
Q 017180 127 TIVDWPGLGYSDRPK----MDYNADVMEKFVVDLINAPDSP------------------VSSSESDLVIFGGGHAATLTV 184 (376)
Q Consensus 127 i~~D~~G~G~S~~~~----~~~~~~~~~~~l~~~l~~l~~~------------------~~~~~~~~~lvG~S~Gg~ia~ 184 (376)
+++|+||||+|+... ...+.+++++|+.++++.+... ......|++|+||||||.+++
T Consensus 78 ~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~ 157 (332)
T TIGR01607 78 YGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIAL 157 (332)
T ss_pred EEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHH
Confidence 999999999998431 1247888999999988765320 000146899999999999999
Q ss_pred HHHHhCCC--------CcceEEEeccCCCCCCCcccCCCCchhh-hhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHh
Q 017180 185 RAAKKNLV--------KPTAIAAVAPTWAGPLPIVFGRDSSMET-RYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKS 255 (376)
Q Consensus 185 ~~a~~~p~--------~v~~lvl~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (376)
.++.++++ .++++|+++|.+.-........ ..... ....+.. +..+...
T Consensus 158 ~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~-~~~~~~~~~l~~~---------------------~~~~~p~ 215 (332)
T TIGR01607 158 RLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDS-FKFKYFYLPVMNF---------------------MSRVFPT 215 (332)
T ss_pred HHHHHhccccccccccccceEEEeccceEEecccCCCc-chhhhhHHHHHHH---------------------HHHHCCc
Confidence 99876542 5889999988531100000000 00000 0000000 0000000
Q ss_pred cccCC--CCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHH
Q 017180 256 HVYSN--PDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEA 333 (376)
Q Consensus 256 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~ 333 (376)
..... .....+...+.+.......... ....+...... ..+.+...+..+..++|+|+|+|++|.+++.+..+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~Dp~~~~~~-~s~~~~~~l~~---~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~ 291 (332)
T TIGR01607 216 FRISKKIRYEKSPYVNDIIKFDKFRYDGG-ITFNLASELIK---ATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVS 291 (332)
T ss_pred ccccCccccccChhhhhHHhcCccccCCc-ccHHHHHHHHH---HHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHH
Confidence 00000 0001111111111100000000 00111111000 001122233334225899999999999999988888
Q ss_pred Hhcc--cCCceEEEeCCC-CCCCCCC-hHHHHHHHHHHHH
Q 017180 334 LKGA--KGVTKFVEVPGA-LLPQEEY-PAMVAQELYQFLQ 369 (376)
Q Consensus 334 ~~~~--~~~~~~~~~~~~-H~~~~e~-pe~~~~~i~~fl~ 369 (376)
+.+. .+++++++++++ |.++.|. ++++.+.|.+||.
T Consensus 292 ~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 292 FYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred HHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 7643 357899999999 9988875 7899999999985
No 46
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.92 E-value=3.9e-23 Score=186.37 Aligned_cols=274 Identities=12% Similarity=0.051 Sum_probs=163.6
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccch-------------HhHHHHHH---HHhhhCCcceEEEEeCCCCCcCC
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVE-------------EWRLVAQD---IVQRVGKVNWRATIVDWPGLGYS 137 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~-------------~~~~~~~~---L~~~~~~~~~~Vi~~D~~G~G~S 137 (376)
.++|+|+.+|.-++.....||++|++. ++.. -|..++.. |.- ..|.||++|..|-|.|
T Consensus 40 ~~~~~Y~t~G~ln~~~~n~vlv~h~~t--g~~h~~~~~~~~~~~~gww~~~iG~g~~lDt----~~yfvi~~n~lG~~~~ 113 (389)
T PRK06765 40 DVQMGYETYGTLNRAKSNVILITHYFS--ATSHAAGKYTADDEESGYWDGLIGPGKAIDT----NKYFVISTDTLCNVQV 113 (389)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCCC--CchhhcccccccCCCcccHHhccCCCCCcCC----CceEEEEecccCCCcC
Confidence 568999999986654456788889998 5331 25444421 222 2699999999998763
Q ss_pred CC------------CC---------CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEE-EEecchHHHHHHHHHHhCCCCcc
Q 017180 138 DR------------PK---------MDYNADVMEKFVVDLINAPDSPVSSSESDLV-IFGGGHAATLTVRAAKKNLVKPT 195 (376)
Q Consensus 138 ~~------------~~---------~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-lvG~S~Gg~ia~~~a~~~p~~v~ 195 (376)
+. |. ..++++++++++.+++++++ .++++ ++||||||++++.+|.++|++|+
T Consensus 114 ~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lg------i~~~~~vvG~SmGG~ial~~a~~~P~~v~ 187 (389)
T PRK06765 114 KDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLG------IARLHAVMGPSMGGMQAQEWAVHYPHMVE 187 (389)
T ss_pred CCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcC------CCCceEEEEECHHHHHHHHHHHHChHhhh
Confidence 21 11 24899999999999999997 67775 99999999999999999999999
Q ss_pred eEEEeccCCCCCCCcccCCCCchh--hhhH-HHHhhhccCc-------------hhhHHhh----hhhccHHHHHHHHHh
Q 017180 196 AIAAVAPTWAGPLPIVFGRDSSME--TRYG-LLRGTLRAPG-------------VGWMMYN----MLVSNEKAIQSQYKS 255 (376)
Q Consensus 196 ~lvl~~p~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~-------------~~~~~~~----~~~~~~~~~~~~~~~ 255 (376)
++|+++..... ..+. .... +...+...+. .+..... ........+...+.+
T Consensus 188 ~lv~ia~~~~~---------~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r 258 (389)
T PRK06765 188 RMIGVIGNPQN---------DAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPR 258 (389)
T ss_pred eEEEEecCCCC---------ChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCc
Confidence 99999764211 0010 0111 1111111111 0000000 000011121111111
Q ss_pred cccCCCC----CCChHHHHHHHHH----HhccCCCchhHHHhhc--cCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCC
Q 017180 256 HVYSNPD----NVTPGIVESRYAL----TKRKGARYVPAAFLTG--LLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPR 325 (376)
Q Consensus 256 ~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~ 325 (376)
....... ......++.+... .....-...+...... ..+......++.+.+.++ ++|+|+|+|++|.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I--~~PtLvI~G~~D~l 336 (389)
T PRK06765 259 NASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNI--EANVLMIPCKQDLL 336 (389)
T ss_pred CccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcC--CCCEEEEEeCCCCC
Confidence 1000000 0001112222211 1111111111111111 111100111367788889 99999999999999
Q ss_pred CCHHHHHHHhcccC----CceEEEeCC-C-CCCCCCChHHHHHHHHHHHHh
Q 017180 326 RSKAEMEALKGAKG----VTKFVEVPG-A-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 326 ~~~~~~~~~~~~~~----~~~~~~~~~-~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
+|.+..+.+.+..+ +++++++++ + |++++|+|+++++.|.+||++
T Consensus 337 ~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 337 QPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 99998888877664 689999985 6 999999999999999999975
No 47
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.92 E-value=1.6e-22 Score=184.68 Aligned_cols=218 Identities=15% Similarity=0.204 Sum_probs=140.3
Q ss_pred CCcEEEecCCCCCccc-hHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTV-EEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~-~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.|+||++||++ +.. ..|..++..|.++ ||+|+++|+||||.|.............+.+.+++.... .+..
T Consensus 194 ~P~Vli~gG~~--~~~~~~~~~~~~~La~~----Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~---~vd~ 264 (414)
T PRK05077 194 FPTVLVCGGLD--SLQTDYYRLFRDYLAPR----GIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVP---WVDH 264 (414)
T ss_pred ccEEEEeCCcc--cchhhhHHHHHHHHHhC----CCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCc---ccCc
Confidence 55666666666 543 5788888899887 999999999999999743223334444455656665542 1235
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHH
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKA 248 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (376)
.++.++||||||.+++.+|..+|++++++|+++|.... .+.. . .. ...+ +..
T Consensus 265 ~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~----~~~~----~---~~--------------~~~~---p~~ 316 (414)
T PRK05077 265 TRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHT----LLTD----P---KR--------------QQQV---PEM 316 (414)
T ss_pred ccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccch----hhcc----h---hh--------------hhhc---hHH
Confidence 78999999999999999999999999999999874211 0000 0 00 0000 000
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHH-hcccCCCcEEEEEeCCCCCCC
Q 017180 249 IQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLF-ADLEGKLPLLVVSTEGSPRRS 327 (376)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~Pvlii~G~~D~~~~ 327 (376)
....+... .... ..+.+.+... +..+.. . ....+ +++ ++|+|+|+|++|+++|
T Consensus 317 ~~~~la~~-lg~~-~~~~~~l~~~----------------l~~~sl---~---~~~~l~~~i--~~PvLiI~G~~D~ivP 370 (414)
T PRK05077 317 YLDVLASR-LGMH-DASDEALRVE----------------LNRYSL---K---VQGLLGRRC--PTPMLSGYWKNDPFSP 370 (414)
T ss_pred HHHHHHHH-hCCC-CCChHHHHHH----------------hhhccc---h---hhhhhccCC--CCcEEEEecCCCCCCC
Confidence 01011110 0000 1111111100 000000 0 01112 457 8999999999999999
Q ss_pred HHHHHHHhcccCCceEEEeCCCCCCCCCChHHHHHHHHHHHHhhc
Q 017180 328 KAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
.+..+.+.+..++.++++++++ ++++.++++.+.|.+||.+.+
T Consensus 371 ~~~a~~l~~~~~~~~l~~i~~~--~~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 371 EEDSRLIASSSADGKLLEIPFK--PVYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred HHHHHHHHHhCCCCeEEEccCC--CccCCHHHHHHHHHHHHHHHh
Confidence 9999998888899999999997 456799999999999998764
No 48
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.91 E-value=9.2e-23 Score=172.30 Aligned_cols=249 Identities=12% Similarity=0.097 Sum_probs=161.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
.|+++++||+. ++...|+.+...|++.+ +..|+++|.|-||.|... ..++.+.+++|+..||+..+... ...
T Consensus 52 ~Pp~i~lHGl~--GS~~Nw~sv~k~Ls~~l---~~~v~~vd~RnHG~Sp~~-~~h~~~~ma~dv~~Fi~~v~~~~--~~~ 123 (315)
T KOG2382|consen 52 APPAIILHGLL--GSKENWRSVAKNLSRKL---GRDVYAVDVRNHGSSPKI-TVHNYEAMAEDVKLFIDGVGGST--RLD 123 (315)
T ss_pred CCceEEecccc--cCCCCHHHHHHHhcccc---cCceEEEecccCCCCccc-cccCHHHHHHHHHHHHHHccccc--ccC
Confidence 78999999999 99999999999999864 579999999999999854 45668999999999999985221 257
Q ss_pred cEEEEecchHH-HHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCch-------h---hHH
Q 017180 170 DLVIFGGGHAA-TLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGV-------G---WMM 238 (376)
Q Consensus 170 ~~~lvG~S~Gg-~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~ 238 (376)
+++++|||||| .+++..+...|+.+.++|+++-+.. ..+. ........+..+...... . +.+
T Consensus 124 ~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~-~~~~------~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l 196 (315)
T KOG2382|consen 124 PVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPG-GVGR------SYGEYRELIKAMIQLDLSIGVSRGRKEALKSL 196 (315)
T ss_pred CceecccCcchHHHHHHHHHhcCcccceeEEEecCCc-cCCc------ccchHHHHHHHHHhccccccccccHHHHHHHH
Confidence 89999999999 7777778899999999999864321 1111 111222333333322211 0 001
Q ss_pred hhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHH--hcccCCCcEE
Q 017180 239 YNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLF--ADLEGKLPLL 316 (376)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~Pvl 316 (376)
.... .+..+..++....-..... ... .-.........++..+... .++..+ ... ..||+
T Consensus 197 ~~~~--~d~~~~~fi~~nl~~~~~~--~s~--------~w~~nl~~i~~~~~~~~~~-----s~~~~l~~~~~--~~pvl 257 (315)
T KOG2382|consen 197 IEVG--FDNLVRQFILTNLKKSPSD--GSF--------LWRVNLDSIASLLDEYEIL-----SYWADLEDGPY--TGPVL 257 (315)
T ss_pred HHHh--cchHHHHHHHHhcCcCCCC--Cce--------EEEeCHHHHHHHHHHHHhh-----ccccccccccc--cccee
Confidence 1100 0111221222111100000 000 0000000111111110000 011112 333 78999
Q ss_pred EEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 317 VVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 317 ii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
+++|.++..++.+...++.+.+|++++++++++ |++|.|+|+++.+.|.+|+.+..
T Consensus 258 fi~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 258 FIKGLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred EEecCCCCCcChhHHHHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 999999999999999999999999999999977 99999999999999999998653
No 49
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.91 E-value=6.2e-23 Score=162.00 Aligned_cols=223 Identities=10% Similarity=0.118 Sum_probs=151.6
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+..||||||+. ++....+.+...|.+. ||.|.+|.+||||.....-...+.++|-+++.+..+.|... .-+
T Consensus 15 ~~AVLllHGFT--Gt~~Dvr~Lgr~L~e~----GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~---gy~ 85 (243)
T COG1647 15 NRAVLLLHGFT--GTPRDVRMLGRYLNEN----GYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA---GYD 85 (243)
T ss_pred CEEEEEEeccC--CCcHHHHHHHHHHHHC----CceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc---CCC
Confidence 34699999999 9999999999999997 99999999999998764445788899988887666555311 267
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHH
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAI 249 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (376)
.|.++|.||||.+++.+|.++| ++++|.++++... .....+ . ...+
T Consensus 86 eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~----------------------k~~~~i----i------e~~l 131 (243)
T COG1647 86 EIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNV----------------------KSWRII----I------EGLL 131 (243)
T ss_pred eEEEEeecchhHHHHHHHhhCC--ccceeeecCCccc----------------------ccchhh----h------HHHH
Confidence 8999999999999999999998 6799988874210 000000 0 0111
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHHHHhccCC--CchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCC
Q 017180 250 QSQYKSHVYSNPDNVTPGIVESRYALTKRKGA--RYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRS 327 (376)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~ 327 (376)
+.+-...-+ ...+++..+..+........ ...+..+ .......+..| ..|++++.|.+|+.++
T Consensus 132 ~y~~~~kk~---e~k~~e~~~~e~~~~~~~~~~~~~~~~~~----------i~~~~~~~~~I--~~pt~vvq~~~D~mv~ 196 (243)
T COG1647 132 EYFRNAKKY---EGKDQEQIDKEMKSYKDTPMTTTAQLKKL----------IKDARRSLDKI--YSPTLVVQGRQDEMVP 196 (243)
T ss_pred HHHHHhhhc---cCCCHHHHHHHHHHhhcchHHHHHHHHHH----------HHHHHhhhhhc--ccchhheecccCCCCC
Confidence 100000000 12233333333322221100 0000111 11245567777 9999999999999999
Q ss_pred HHHHHHHhcc--cCCceEEEeCCC-CCC-CCCChHHHHHHHHHHHHh
Q 017180 328 KAEMEALKGA--KGVTKFVEVPGA-LLP-QEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 328 ~~~~~~~~~~--~~~~~~~~~~~~-H~~-~~e~pe~~~~~i~~fl~~ 370 (376)
.+.++.+... ..+.++.+++++ |.+ +.+..|.+.+.|..||++
T Consensus 197 ~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 197 AESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred HHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 9999988654 346789999999 995 555689999999999974
No 50
>PRK13604 luxD acyl transferase; Provisional
Probab=99.90 E-value=6.5e-22 Score=169.24 Aligned_cols=221 Identities=11% Similarity=0.132 Sum_probs=133.0
Q ss_pred ceeEEEEecccC--CCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC-cCCCCCCCCCCHHHHH
Q 017180 74 SINIYYEKHERE--SPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL-GYSDRPKMDYNADVME 150 (376)
Q Consensus 74 g~~l~y~~~g~~--~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~-G~S~~~~~~~~~~~~~ 150 (376)
|.+|+-+..-++ ..++.++||+.||++ .....+..++..|.++ ||.|+.+|.||| |+|+......+.....
T Consensus 19 G~~L~Gwl~~P~~~~~~~~~~vIi~HGf~--~~~~~~~~~A~~La~~----G~~vLrfD~rg~~GeS~G~~~~~t~s~g~ 92 (307)
T PRK13604 19 GQSIRVWETLPKENSPKKNNTILIASGFA--RRMDHFAGLAEYLSSN----GFHVIRYDSLHHVGLSSGTIDEFTMSIGK 92 (307)
T ss_pred CCEEEEEEEcCcccCCCCCCEEEEeCCCC--CChHHHHHHHHHHHHC----CCEEEEecCCCCCCCCCCccccCcccccH
Confidence 556654444332 223357899999999 8777799999999997 999999999988 9997544344444456
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
+|+..+++.+... ...++.|+||||||.+++..|... .++.+|+.+|... ....++..+.
T Consensus 93 ~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~---------------l~d~l~~~~~ 152 (307)
T PRK13604 93 NSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVN---------------LRDTLERALG 152 (307)
T ss_pred HHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCccc---------------HHHHHHHhhh
Confidence 6776555555321 256799999999999997777643 3889999998420 0000000000
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhcc--CCCCCcHHHHHHHHhc
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGL--LDPVNSREEFLQLFAD 308 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 308 (376)
. .+...... ... +.++ ..+.......|+... .+.. ......+.+++
T Consensus 153 ~--------------------~~~~~p~~---~lp-~~~d-------~~g~~l~~~~f~~~~~~~~~~-~~~s~i~~~~~ 200 (307)
T PRK13604 153 Y--------------------DYLSLPID---ELP-EDLD-------FEGHNLGSEVFVTDCFKHGWD-TLDSTINKMKG 200 (307)
T ss_pred c--------------------ccccCccc---ccc-cccc-------cccccccHHHHHHHHHhcCcc-ccccHHHHHhh
Confidence 0 00000000 000 0000 000000000011000 0000 01113445667
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHHhccc--CCceEEEeCCC-CCCCC
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEALKGAK--GVTKFVEVPGA-LLPQE 354 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~-H~~~~ 354 (376)
+ ++|+|+|||++|.++|.+..+.+.+.. .+++++.++|+ |...+
T Consensus 201 l--~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 201 L--DIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGE 247 (307)
T ss_pred c--CCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCc
Confidence 7 899999999999999999999887654 47999999999 98654
No 51
>PRK10985 putative hydrolase; Provisional
Probab=99.90 E-value=6.8e-22 Score=176.37 Aligned_cols=247 Identities=10% Similarity=0.069 Sum_probs=139.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCC---CHHHHHHHHHHHHhCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDY---NADVMEKFVVDLINAPDSPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~---~~~~~~~~l~~~l~~l~~~~~ 165 (376)
+|+||++||+++......+..++..|.++ ||+|+++|+||||.|... ...+ ..++..+.+..+.++++
T Consensus 58 ~p~vll~HG~~g~~~~~~~~~~~~~l~~~----G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~---- 129 (324)
T PRK10985 58 KPRLVLFHGLEGSFNSPYAHGLLEAAQKR----GWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFG---- 129 (324)
T ss_pred CCEEEEeCCCCCCCcCHHHHHHHHHHHHC----CCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCC----
Confidence 67899999998322233456788888886 999999999999987532 1222 22333333333333343
Q ss_pred CCCCcEEEEecchHHHHHHHHHHhCCCC--cceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhh
Q 017180 166 SSESDLVIFGGGHAATLTVRAAKKNLVK--PTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLV 243 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~~~p~~--v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (376)
..+++++||||||.+++.++.++++. +.++|++++.... ......+..... ......+...+
T Consensus 130 --~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~------------~~~~~~~~~~~~-~~~~~~l~~~l- 193 (324)
T PRK10985 130 --HVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLML------------EACSYRMEQGFS-RVYQRYLLNLL- 193 (324)
T ss_pred --CCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCH------------HHHHHHHhhhHH-HHHHHHHHHHH-
Confidence 56899999999999988888876544 8888888874310 000000000000 00111111111
Q ss_pred ccHHHHHHHHHhcccCCCCCCChHHHHH------HHHHHhcc-CCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEE
Q 017180 244 SNEKAIQSQYKSHVYSNPDNVTPGIVES------RYALTKRK-GARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLL 316 (376)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvl 316 (376)
...+...... +......+.+.+.. +.+....+ ........++.. . ...+.++++ ++|++
T Consensus 194 --~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~---~-----~~~~~l~~i--~~P~l 259 (324)
T PRK10985 194 --KANAARKLAA--YPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQ---C-----SALPLLNQI--RKPTL 259 (324)
T ss_pred --HHHHHHHHHh--ccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHH---C-----ChHHHHhCC--CCCEE
Confidence 0111111111 11111112221111 11111111 111111111111 0 134567788 99999
Q ss_pred EEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCCh-----HHHHHHHHHHHHhhcCC
Q 017180 317 VVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYP-----AMVAQELYQFLQQTFEP 374 (376)
Q Consensus 317 ii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~p-----e~~~~~i~~fl~~~~~~ 374 (376)
+|+|++|++++.+..+.+.+..+++++++++++ |+.++|.. -..-+.+.+|+....++
T Consensus 260 ii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~~~ 323 (324)
T PRK10985 260 IIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYLEA 323 (324)
T ss_pred EEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhhcC
Confidence 999999999998888877777889999999998 99888742 34577788888776543
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.89 E-value=2.7e-21 Score=168.20 Aligned_cols=234 Identities=15% Similarity=0.169 Sum_probs=138.1
Q ss_pred CCcEEEecCCCCC--ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDV--STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~--~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
+++||++||++.. ++...|..+++.|+++ ||+|+++|+||||.|+.. ..+.+++.+|+.++++.+.... ..
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~----G~~v~~~Dl~G~G~S~~~--~~~~~~~~~d~~~~~~~l~~~~-~g 98 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEA----GFPVLRFDYRGMGDSEGE--NLGFEGIDADIAAAIDAFREAA-PH 98 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHC----CCEEEEeCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHhhC-CC
Confidence 5678888876521 2334567788899886 999999999999999743 2466777888888877763111 01
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHH
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEK 247 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (376)
.++++++||||||.+++.+|.. +.+|+++|+++|.....-. ... ..+. ........+ ..
T Consensus 99 ~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~-------~~~---~~~~---------~~~~~~~~~-~~ 157 (274)
T TIGR03100 99 LRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAA-------QAA---SRIR---------HYYLGQLLS-AD 157 (274)
T ss_pred CCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCccc-------chH---HHHH---------HHHHHHHhC-hH
Confidence 3679999999999999999865 4689999999984211000 000 0000 000100000 11
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHH--h-ccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCC
Q 017180 248 AIQSQYKSHVYSNPDNVTPGIVESRYALT--K-RKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSP 324 (376)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~ 324 (376)
..+..+ .....+ .+....+.... . ......... ....++...+.++ ++|+++++|++|.
T Consensus 158 ~~~~~~-----~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~--~~P~ll~~g~~D~ 219 (274)
T TIGR03100 158 FWRKLL-----SGEVNL-GSSLRGLGDALLKARQKGDEVAHG----------GLAERMKAGLERF--QGPVLFILSGNDL 219 (274)
T ss_pred HHHHhc-----CCCccH-HHHHHHHHHHHHhhhhcCCCcccc----------hHHHHHHHHHHhc--CCcEEEEEcCcch
Confidence 111000 000001 11111111100 0 000000000 0123355667788 9999999999998
Q ss_pred CCCHHHH------HHHhccc--CCceEEEeCCC-CCCC-CCChHHHHHHHHHHHHh
Q 017180 325 RRSKAEM------EALKGAK--GVTKFVEVPGA-LLPQ-EEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 325 ~~~~~~~------~~~~~~~--~~~~~~~~~~~-H~~~-~e~pe~~~~~i~~fl~~ 370 (376)
..+ +.. ..+.+.. ++++++.++++ |++. .+.++++.+.|.+||++
T Consensus 220 ~~~-~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 220 TAQ-EFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred hHH-HHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 764 332 3344433 78999999999 9984 45569999999999963
No 53
>PRK11071 esterase YqiA; Provisional
Probab=99.87 E-value=1.3e-20 Score=154.01 Aligned_cols=185 Identities=10% Similarity=0.072 Sum_probs=122.5
Q ss_pred CcEEEecCCCCCccchHhHH--HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 91 KNILMIPTISDVSTVEEWRL--VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~--~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
|+|||+||++ ++...|.. +...+.+... +|+|+++|+|||| +++++++.+++++++ .
T Consensus 2 p~illlHGf~--ss~~~~~~~~~~~~l~~~~~--~~~v~~~dl~g~~-----------~~~~~~l~~l~~~~~------~ 60 (190)
T PRK11071 2 STLLYLHGFN--SSPRSAKATLLKNWLAQHHP--DIEMIVPQLPPYP-----------ADAAELLESLVLEHG------G 60 (190)
T ss_pred CeEEEECCCC--CCcchHHHHHHHHHHHHhCC--CCeEEeCCCCCCH-----------HHHHHHHHHHHHHcC------C
Confidence 4799999999 88888874 3455554211 6999999999985 467889999999986 6
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHH
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKA 248 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (376)
++++++||||||.+++.+|.++|. ++|+++|... + ...+......
T Consensus 61 ~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~---~------------~~~~~~~~~~----------------- 105 (190)
T PRK11071 61 DPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAVR---P------------FELLTDYLGE----------------- 105 (190)
T ss_pred CCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCCC---H------------HHHHHHhcCC-----------------
Confidence 789999999999999999999883 4688888320 0 0000000000
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCH
Q 017180 249 IQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSK 328 (376)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~ 328 (376)
...........++.+.++..... + +.+ +. . .+|+++|+|++|.++|.
T Consensus 106 ----~~~~~~~~~~~~~~~~~~d~~~~------------------~-------~~~-i~-~--~~~v~iihg~~De~V~~ 152 (190)
T PRK11071 106 ----NENPYTGQQYVLESRHIYDLKVM------------------Q-------IDP-LE-S--PDLIWLLQQTGDEVLDY 152 (190)
T ss_pred ----cccccCCCcEEEcHHHHHHHHhc------------------C-------Ccc-CC-C--hhhEEEEEeCCCCcCCH
Confidence 00000000001111111111000 0 111 11 3 77999999999999999
Q ss_pred HHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 329 AEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
+...++.+. ++.+.+++| |.. ...+++.+.|.+|+.
T Consensus 153 ~~a~~~~~~---~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 153 RQAVAYYAA---CRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred HHHHHHHHh---cceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 999988774 467788999 986 444889999999975
No 54
>PRK10566 esterase; Provisional
Probab=99.85 E-value=1.4e-19 Score=155.95 Aligned_cols=220 Identities=14% Similarity=0.069 Sum_probs=126.9
Q ss_pred EEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHH-------HH
Q 017180 77 IYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNAD-------VM 149 (376)
Q Consensus 77 l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~-------~~ 149 (376)
++|...+..+ ++.|+||++||++ ++...|..++..|.++ ||+|+++|+||||.+.......... ..
T Consensus 15 ~~~~p~~~~~-~~~p~vv~~HG~~--~~~~~~~~~~~~l~~~----G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~ 87 (249)
T PRK10566 15 LHAFPAGQRD-TPLPTVFFYHGFT--SSKLVYSYFAVALAQA----GFRVIMPDAPMHGARFSGDEARRLNHFWQILLQN 87 (249)
T ss_pred EEEcCCCCCC-CCCCEEEEeCCCC--cccchHHHHHHHHHhC----CCEEEEecCCcccccCCCccccchhhHHHHHHHH
Confidence 4555544321 1267999999999 8888899999999886 9999999999999864221111111 11
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhh
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTL 229 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (376)
.+++.++++.+........++++++|||+||.+++.++.++|+....++++.+.+ ...... ..
T Consensus 88 ~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~----------------~~~~~~-~~ 150 (249)
T PRK10566 88 MQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGY----------------FTSLAR-TL 150 (249)
T ss_pred HHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHH----------------HHHHHH-Hh
Confidence 2333333333221111235789999999999999999998886433334433210 000000 00
Q ss_pred ccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcc
Q 017180 230 RAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADL 309 (376)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 309 (376)
+....... .........+..... .. + ....+.++
T Consensus 151 -----------------------~~~~~~~~--~~~~~~~~~~~~~~~----------------~~--~---~~~~~~~i 184 (249)
T PRK10566 151 -----------------------FPPLIPET--AAQQAEFNNIVAPLA----------------EW--E---VTHQLEQL 184 (249)
T ss_pred -----------------------cccccccc--cccHHHHHHHHHHHh----------------hc--C---hhhhhhhc
Confidence 00000000 000000000000000 00 0 11223343
Q ss_pred cCCCcEEEEEeCCCCCCCHHHHHHHhcccC------CceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 310 EGKLPLLVVSTEGSPRRSKAEMEALKGAKG------VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 310 ~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~------~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
. ++|+|+++|++|.+++.+..+.+.+..+ +++++.++++ |... + +..+.+.+||++.
T Consensus 185 ~-~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~~ 248 (249)
T PRK10566 185 A-DRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---P-EALDAGVAFFRQH 248 (249)
T ss_pred C-CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---H-HHHHHHHHHHHhh
Confidence 1 5899999999999999998888765432 3677889998 9853 4 4678889999875
No 55
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.85 E-value=1.1e-21 Score=166.79 Aligned_cols=222 Identities=15% Similarity=0.147 Sum_probs=131.0
Q ss_pred eEEEEeCCCCCcCCCC---C-CCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEE
Q 017180 124 WRATIVDWPGLGYSDR---P-KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAA 199 (376)
Q Consensus 124 ~~Vi~~D~~G~G~S~~---~-~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl 199 (376)
|+|+++|+||+|.|++ . ...++.+++++++..++++++ .++++++||||||.+++.+|.++|++|+++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALG------IKKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHT------TSSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhC------CCCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 7999999999999994 2 468999999999999999997 67799999999999999999999999999999
Q ss_pred eccCCCCCCCcccCCCCchhhhhH-HHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHH-HHHHh
Q 017180 200 VAPTWAGPLPIVFGRDSSMETRYG-LLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESR-YALTK 277 (376)
Q Consensus 200 ~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 277 (376)
+++.. ..+..... ..... ............ ...... ......... ...........+..... .....
T Consensus 75 ~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 143 (230)
T PF00561_consen 75 ISPPP--DLPDGLWN----RIWPRGNLQGQLLDNFFN-FLSDPI---KPLLGRWPK-QFFAYDREFVEDFLKQFQSQQYA 143 (230)
T ss_dssp ESESS--HHHHHHHH----HCHHHHHHHHHHHHHHHH-HHHHHH---HHHHHHHHH-HHHHHHHHHHHTHHHHHHHHHHH
T ss_pred Eeeec--cchhhhhH----HHHhhhhhhhhHHHhhhc-cccccc---hhhhhhhhh-heeeccCccccchhhccchhhhh
Confidence 98731 00000000 00000 000000000000 000000 000000000 00000000000000000 00000
Q ss_pred ccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCC
Q 017180 278 RKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEY 356 (376)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~ 356 (376)
.............. .............+.++ ++|+++++|++|.++|.+....+.+..|+.++++++++ |+.+++.
T Consensus 144 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~i--~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~ 220 (230)
T PF00561_consen 144 RFAETDAFDNMFWN-ALGYFSVWDPSPALSNI--KVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEG 220 (230)
T ss_dssp HTCHHHHHHHHHHH-HHHHHHHHHHHHHHTTT--TSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHS
T ss_pred HHHHHHHHhhhccc-ccccccccccccccccc--CCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcC
Confidence 00000000000000 00000122245566778 99999999999999999999999999999999999997 9999999
Q ss_pred hHHHHHHHH
Q 017180 357 PAMVAQELY 365 (376)
Q Consensus 357 pe~~~~~i~ 365 (376)
|+++++.|.
T Consensus 221 ~~~~~~~i~ 229 (230)
T PF00561_consen 221 PDEFNEIII 229 (230)
T ss_dssp HHHHHHHHH
T ss_pred HHhhhhhhc
Confidence 999999875
No 56
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.85 E-value=1.2e-20 Score=153.80 Aligned_cols=104 Identities=13% Similarity=0.209 Sum_probs=88.2
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+|.++|+||.| .+...|..++..|.... ..+|+++|+||||+|. .+..+.+.+.++.|+.++++++-.. ..
T Consensus 74 gpil~l~HG~G--~S~LSfA~~a~el~s~~---~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge---~~ 145 (343)
T KOG2564|consen 74 GPILLLLHGGG--SSALSFAIFASELKSKI---RCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGE---LP 145 (343)
T ss_pred ccEEEEeecCc--ccchhHHHHHHHHHhhc---ceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhcc---CC
Confidence 88889999999 99999999999998752 5889999999999998 6667899999999999999887421 25
Q ss_pred CcEEEEecchHHHHHHHHHH--hCCCCcceEEEecc
Q 017180 169 SDLVIFGGGHAATLTVRAAK--KNLVKPTAIAAVAP 202 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~--~~p~~v~~lvl~~p 202 (376)
.+++||||||||.||...|. .-|. +.++++++-
T Consensus 146 ~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDV 180 (343)
T KOG2564|consen 146 PQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDV 180 (343)
T ss_pred CceEEEeccccchhhhhhhhhhhchh-hhceEEEEE
Confidence 67999999999999998877 3344 788888764
No 57
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.84 E-value=1e-19 Score=168.62 Aligned_cols=245 Identities=12% Similarity=0.031 Sum_probs=145.1
Q ss_pred CCcEEEecCCCCCccchHhH-----HHHHHHHhhhCCcceEEEEeCCCCCcCCCCC--CCCCCHHHHHHHHHHHHhCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWR-----LVAQDIVQRVGKVNWRATIVDWPGLGYSDRP--KMDYNADVMEKFVVDLINAPDS 162 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~-----~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~--~~~~~~~~~~~~l~~~l~~l~~ 162 (376)
++|||++||+. ...+.|+ .++..|.++ ||+|+++|+||+|.|... ..+|..+.+.+.+..+++..+
T Consensus 188 ~~PlLiVp~~i--~k~yilDL~p~~Slv~~L~~q----Gf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g- 260 (532)
T TIGR01838 188 KTPLLIVPPWI--NKYYILDLRPQNSLVRWLVEQ----GHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITG- 260 (532)
T ss_pred CCcEEEECccc--ccceeeecccchHHHHHHHHC----CcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcC-
Confidence 67999999998 8877775 788999886 999999999999998743 235555666777778877776
Q ss_pred CCCCCCCcEEEEecchHHHHHH----HHHHhC-CCCcceEEEeccCCCCCCCcccCC---CCchhhhhHHHHhhhccCc-
Q 017180 163 PVSSSESDLVIFGGGHAATLTV----RAAKKN-LVKPTAIAAVAPTWAGPLPIVFGR---DSSMETRYGLLRGTLRAPG- 233 (376)
Q Consensus 163 ~~~~~~~~~~lvG~S~Gg~ia~----~~a~~~-p~~v~~lvl~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~- 233 (376)
.++++++||||||.++. .++..+ +++|+++++++....-.-+..... ..............-..+.
T Consensus 261 -----~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~ 335 (532)
T TIGR01838 261 -----EKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGR 335 (532)
T ss_pred -----CCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHH
Confidence 78899999999999862 245555 788999999976432111100000 0000001111111000010
Q ss_pred hhhHHhhhhhccHHHHHHHHHhc-------------ccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHH
Q 017180 234 VGWMMYNMLVSNEKAIQSQYKSH-------------VYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE 300 (376)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (376)
.-...+..+..........+... +..+...++.+....+.+.....+... . +.. ...
T Consensus 336 ~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~-~-----G~~----~v~ 405 (532)
T TIGR01838 336 QMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALT-T-----GGL----EVC 405 (532)
T ss_pred HHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCc-C-----Cee----EEC
Confidence 01111333311111111111100 111222333333333332222221110 0 000 000
Q ss_pred HHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChH
Q 017180 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPA 358 (376)
Q Consensus 301 ~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe 358 (376)
.....+.+| ++|+++|+|++|.++|.+..+.+.+..++.+..+++++ |++++++|.
T Consensus 406 g~~~dL~~I--~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 406 GVRLDLSKV--KVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CEecchhhC--CCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 123456777 99999999999999999999998888888888899988 999998875
No 58
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.84 E-value=3e-19 Score=161.22 Aligned_cols=100 Identities=12% Similarity=0.153 Sum_probs=79.4
Q ss_pred CCcEEEecCCCCCccchHh-----HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH-HHH----HHhC
Q 017180 90 SKNILMIPTISDVSTVEEW-----RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF-VVD----LINA 159 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~-----~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~-l~~----~l~~ 159 (376)
++|||++||+. .+...+ +.++..|.+. ||+|+++|++|+|.|+.. .+.+++..+ +.+ +.+.
T Consensus 62 ~~pvl~v~~~~--~~~~~~d~~~~~~~~~~L~~~----G~~V~~~D~~g~g~s~~~---~~~~d~~~~~~~~~v~~l~~~ 132 (350)
T TIGR01836 62 KTPLLIVYALV--NRPYMLDLQEDRSLVRGLLER----GQDVYLIDWGYPDRADRY---LTLDDYINGYIDKCVDYICRT 132 (350)
T ss_pred CCcEEEecccc--ccceeccCCCCchHHHHHHHC----CCeEEEEeCCCCCHHHhc---CCHHHHHHHHHHHHHHHHHHH
Confidence 56799999987 555444 6789999887 999999999999987633 456666533 444 4444
Q ss_pred CCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 160 PDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 160 l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
.+ .++++++||||||.+++.++..+|++|+++|++++..
T Consensus 133 ~~------~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~ 171 (350)
T TIGR01836 133 SK------LDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPV 171 (350)
T ss_pred hC------CCcccEEEECHHHHHHHHHHHhCchheeeEEEecccc
Confidence 43 6789999999999999999999999999999998754
No 59
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.83 E-value=1.2e-18 Score=150.74 Aligned_cols=264 Identities=18% Similarity=0.244 Sum_probs=150.8
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFV 153 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l 153 (376)
+..+.|...+.. +++|+|+||++ .+...|......+..... .|+|+++|+||||.|. .. .+....+++++
T Consensus 9 ~~~~~~~~~~~~----~~~i~~~hg~~--~~~~~~~~~~~~~~~~~~--~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~ 78 (282)
T COG0596 9 GVRLAYREAGGG----GPPLVLLHGFP--GSSSVWRPVFKVLPALAA--RYRVIAPDLRGHGRSD-PA-GYSLSAYADDL 78 (282)
T ss_pred CeEEEEeecCCC----CCeEEEeCCCC--CchhhhHHHHHHhhcccc--ceEEEEecccCCCCCC-cc-cccHHHHHHHH
Confidence 445667777654 45899999999 998899875455554311 2899999999999997 21 34555668999
Q ss_pred HHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCc
Q 017180 154 VDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPG 233 (376)
Q Consensus 154 ~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (376)
..++++++ ..+++++|||+||.+++.++.++|++++++|++++...............................
T Consensus 79 ~~~~~~~~------~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (282)
T COG0596 79 AALLDALG------LEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLD 152 (282)
T ss_pred HHHHHHhC------CCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccc
Confidence 99999987 566999999999999999999999999999999875320000000000000000000000000000
Q ss_pred hhhHHhhhhhccHHHHHHHH-HhcccC-----CCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHh
Q 017180 234 VGWMMYNMLVSNEKAIQSQY-KSHVYS-----NPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFA 307 (376)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (376)
... ......... ...... ...................... ............. .....+.
T Consensus 153 ----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~ 218 (282)
T COG0596 153 ----AAA----FAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAAR-ADLAAALLALLDR-----DLRAALA 218 (282)
T ss_pred ----hhh----hhhhhhcccccccccccchhccccccccccchhHhhhhhhhcc-cccchhhhccccc-----ccchhhc
Confidence 000 000000000 000000 0000000000111000000000 0000000000000 1233455
Q ss_pred cccCCCcEEEEEeCCCCCCCHHHHHHHhcccCC-ceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 308 DLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGV-TKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 308 ~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
.+ .+|+++++|++|.+.+......+.+..++ .++++++++ |+++.++|+.+.+.+.+|+.
T Consensus 219 ~~--~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 219 RI--TVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred cC--CCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 66 89999999999977776666666666664 899999998 99999999999999988543
No 60
>PLN02872 triacylglycerol lipase
Probab=99.82 E-value=1.1e-18 Score=157.59 Aligned_cols=268 Identities=10% Similarity=0.058 Sum_probs=147.1
Q ss_pred CCcEEEecCCCCCccchHhH------HHHHHHHhhhCCcceEEEEeCCCCCcCCCC-------CC--CCCCHHHHH-HHH
Q 017180 90 SKNILMIPTISDVSTVEEWR------LVAQDIVQRVGKVNWRATIVDWPGLGYSDR-------PK--MDYNADVME-KFV 153 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~------~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~-------~~--~~~~~~~~~-~~l 153 (376)
+++|||+||++ .+...|. .+...|+++ ||+|+++|+||+|.|.. +. ..++.++++ .|+
T Consensus 74 ~~~Vll~HGl~--~ss~~w~~~~~~~sla~~La~~----GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl 147 (395)
T PLN02872 74 GPPVLLQHGLF--MAGDAWFLNSPEQSLGFILADH----GFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDL 147 (395)
T ss_pred CCeEEEeCccc--ccccceeecCcccchHHHHHhC----CCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHH
Confidence 67899999999 8777773 345567776 99999999999886531 11 257888888 799
Q ss_pred HHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCC---CcceEEEeccCCC-CCCCcccCCCCchh-hhhH-HHHh
Q 017180 154 VDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV---KPTAIAAVAPTWA-GPLPIVFGRDSSME-TRYG-LLRG 227 (376)
Q Consensus 154 ~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~p~~~-~~~~~~~~~~~~~~-~~~~-~~~~ 227 (376)
.++++.+... ..++++++||||||.+++.++ .+|+ +|+.+++++|... ..... ... .... .+..
T Consensus 148 ~a~id~i~~~---~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~------~~~~~~~~~~~~~ 217 (395)
T PLN02872 148 AEMIHYVYSI---TNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHVTA------PLVLRMVFMHLDQ 217 (395)
T ss_pred HHHHHHHHhc---cCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccCCC------HHHHHHHHHhHHH
Confidence 9998886311 147899999999999998554 5676 5888888888531 11100 000 0000 0000
Q ss_pred h---hccCc---hhhHHhhhh---hccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHH---h-hc-cC
Q 017180 228 T---LRAPG---VGWMMYNML---VSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAF---L-TG-LL 293 (376)
Q Consensus 228 ~---~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~-~~ 293 (376)
+ +.... ....+.... ..........+......+ ..+....+..+...............+ . .+ +.
T Consensus 218 ~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~-~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~ 296 (395)
T PLN02872 218 MVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTN-CCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFA 296 (395)
T ss_pred HHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCC-cccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcc
Confidence 0 00000 000000000 000000000000000111 123333333222211000000000000 0 00 00
Q ss_pred CCC-CcHHHH---------HHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCC-ceEEEeCCC-CC---CCCCChH
Q 017180 294 DPV-NSREEF---------LQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGV-TKFVEVPGA-LL---PQEEYPA 358 (376)
Q Consensus 294 ~~~-~~~~~~---------~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~-H~---~~~e~pe 358 (376)
..+ +..... .=.+++++.++|+++++|++|.+++++..+++.+..++ .+++.+++. |. ...+.|+
T Consensus 297 ~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape 376 (395)
T PLN02872 297 HYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKE 376 (395)
T ss_pred cCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHH
Confidence 000 001111 00133442247999999999999999988888877776 688899998 95 5668899
Q ss_pred HHHHHHHHHHHhhcCC
Q 017180 359 MVAQELYQFLQQTFEP 374 (376)
Q Consensus 359 ~~~~~i~~fl~~~~~~ 374 (376)
++.+.|.+||++..+.
T Consensus 377 ~V~~~Il~fL~~~~~~ 392 (395)
T PLN02872 377 DVYNHMIQFFRSLGKS 392 (395)
T ss_pred HHHHHHHHHHHHhhhc
Confidence 9999999999987543
No 61
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.81 E-value=7.8e-19 Score=143.26 Aligned_cols=192 Identities=16% Similarity=0.163 Sum_probs=131.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.++|++.||+. ....+.-.+...|..++ +++|+.+|++|+|.|. +|......++..+..+.+-+..| ..
T Consensus 60 ~~~lly~hGNa--~Dlgq~~~~~~~l~~~l---n~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g-----~~ 129 (258)
T KOG1552|consen 60 HPTLLYSHGNA--ADLGQMVELFKELSIFL---NCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYG-----SP 129 (258)
T ss_pred ceEEEEcCCcc--cchHHHHHHHHHHhhcc---cceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcC-----CC
Confidence 47899999997 77776667777776642 6999999999999999 44444333333322223333332 36
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHH
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKA 248 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (376)
++++|+|+|+|...++.+|.+.| ++++||.+|...+ .+.++..
T Consensus 130 ~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~----------------------------~rv~~~~------- 172 (258)
T KOG1552|consen 130 ERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSG----------------------------MRVAFPD------- 172 (258)
T ss_pred ceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhh----------------------------hhhhccC-------
Confidence 88999999999999999999998 8999999994200 0000000
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCH
Q 017180 249 IQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSK 328 (376)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~ 328 (376)
.....+.+ .+. ..+.++.+ +||+|++||++|.+++.
T Consensus 173 ----~~~~~~~d------------------------------~f~--------~i~kI~~i--~~PVLiiHgtdDevv~~ 208 (258)
T KOG1552|consen 173 ----TKTTYCFD------------------------------AFP--------NIEKISKI--TCPVLIIHGTDDEVVDF 208 (258)
T ss_pred ----cceEEeec------------------------------ccc--------ccCcceec--cCCEEEEecccCceecc
Confidence 00000000 000 12234556 99999999999999999
Q ss_pred HHHHHHhcccCC-ceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 329 AEMEALKGAKGV-TKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 329 ~~~~~~~~~~~~-~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
....++-+..++ .+..++.|+ |.-.+-.| ++.+.+..|+.....
T Consensus 209 sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~-~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 209 SHGKALYERCKEKVEPLWVKGAGHNDIELYP-EYIEHLRRFISSVLP 254 (258)
T ss_pred cccHHHHHhccccCCCcEEecCCCcccccCH-HHHHHHHHHHHHhcc
Confidence 999998766554 477788888 98666656 488999999987654
No 62
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.80 E-value=6.8e-19 Score=138.27 Aligned_cols=203 Identities=14% Similarity=0.153 Sum_probs=136.6
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
.|+++++||.. ++..++-.++..+-.++ +.+|+.+++||||.|+..+..... .-|-..+++.+-.+......
T Consensus 78 ~pTlLyfh~NA--GNmGhr~~i~~~fy~~l---~mnv~ivsYRGYG~S~GspsE~GL---~lDs~avldyl~t~~~~dkt 149 (300)
T KOG4391|consen 78 RPTLLYFHANA--GNMGHRLPIARVFYVNL---KMNVLIVSYRGYGKSEGSPSEEGL---KLDSEAVLDYLMTRPDLDKT 149 (300)
T ss_pred CceEEEEccCC--CcccchhhHHHHHHHHc---CceEEEEEeeccccCCCCccccce---eccHHHHHHHHhcCccCCcc
Confidence 78999999999 88888878777776643 799999999999999944332222 22333444444333344578
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHH
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAI 249 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (376)
++++.|.|+||++|+.+|.+..+++.++|+-+... ..|.+ ..+. .+... ...+
T Consensus 150 kivlfGrSlGGAvai~lask~~~ri~~~ivENTF~--SIp~~------------------~i~~----v~p~~---~k~i 202 (300)
T KOG4391|consen 150 KIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFL--SIPHM------------------AIPL----VFPFP---MKYI 202 (300)
T ss_pred eEEEEecccCCeeEEEeeccchhheeeeeeechhc--cchhh------------------hhhe----eccch---hhHH
Confidence 89999999999999999999999999999988632 01100 0000 00000 0111
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHH
Q 017180 250 QSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKA 329 (376)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~ 329 (376)
..+.-+..+. -...+++- +.|.|+|.|.+|.++|+.
T Consensus 203 ~~lc~kn~~~------------------------------------------S~~ki~~~--~~P~LFiSGlkDelVPP~ 238 (300)
T KOG4391|consen 203 PLLCYKNKWL------------------------------------------SYRKIGQC--RMPFLFISGLKDELVPPV 238 (300)
T ss_pred HHHHHHhhhc------------------------------------------chhhhccc--cCceEEeecCccccCCcH
Confidence 1110000000 01122333 789999999999999999
Q ss_pred HHHHHhcccC--CceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 330 EMEALKGAKG--VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 330 ~~~~~~~~~~--~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
+.+.+.+..| +.++.++|+| |.-.+-. +-+.++|.+||.+..
T Consensus 239 ~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~-dGYfq~i~dFlaE~~ 283 (300)
T KOG4391|consen 239 MMRQLYELCPSRTKRLAEFPDGTHNDTWIC-DGYFQAIEDFLAEVV 283 (300)
T ss_pred HHHHHHHhCchhhhhheeCCCCccCceEEe-ccHHHHHHHHHHHhc
Confidence 9999987765 5689999999 9844432 458899999999864
No 63
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.78 E-value=2.6e-18 Score=146.53 Aligned_cols=107 Identities=16% Similarity=0.126 Sum_probs=86.1
Q ss_pred CCcEEEecCCCCC--ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDV--STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~--~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
.++|||+||++.. .+...|..+++.|++. ||+|+++|+||||.|+......+.+.+.+|+.++++.+... .
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~----Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~---~ 97 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAG----GFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ---G 97 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHC----CCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhc---C
Confidence 5689999999822 1235677788899876 99999999999999985544567788888887765444211 1
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
..+++|+||||||.+++.+|.++|++++++|+++|.
T Consensus 98 ~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~ 133 (266)
T TIGR03101 98 HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPV 133 (266)
T ss_pred CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccc
Confidence 578999999999999999999999999999999984
No 64
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.78 E-value=7.8e-18 Score=132.41 Aligned_cols=143 Identities=17% Similarity=0.365 Sum_probs=109.3
Q ss_pred cEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcE
Q 017180 92 NILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDL 171 (376)
Q Consensus 92 ~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~ 171 (376)
+|||+||++ .+...|..++..|++. ||.|+.+|+||+|.+.... ...+.+.++.+... ...++
T Consensus 1 ~vv~~HG~~--~~~~~~~~~~~~l~~~----G~~v~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-----~~~~i 63 (145)
T PF12695_consen 1 VVVLLHGWG--GSRRDYQPLAEALAEQ----GYAVVAFDYPGHGDSDGAD------AVERVLADIRAGYP-----DPDRI 63 (145)
T ss_dssp EEEEECTTT--TTTHHHHHHHHHHHHT----TEEEEEESCTTSTTSHHSH------HHHHHHHHHHHHHC-----TCCEE
T ss_pred CEEEECCCC--CCHHHHHHHHHHHHHC----CCEEEEEecCCCCccchhH------HHHHHHHHHHhhcC-----CCCcE
Confidence 589999999 8899999999999997 9999999999999874211 22222222211111 26789
Q ss_pred EEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHH
Q 017180 172 VIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQS 251 (376)
Q Consensus 172 ~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (376)
+++|||+||.+++.++.+. .+++++|+++|.. .
T Consensus 64 ~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~---------------------------------------~------- 96 (145)
T PF12695_consen 64 ILIGHSMGGAIAANLAARN-PRVKAVVLLSPYP---------------------------------------D------- 96 (145)
T ss_dssp EEEEETHHHHHHHHHHHHS-TTESEEEEESESS---------------------------------------G-------
T ss_pred EEEEEccCcHHHHHHhhhc-cceeEEEEecCcc---------------------------------------c-------
Confidence 9999999999999999988 7899999998710 0
Q ss_pred HHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHH
Q 017180 252 QYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEM 331 (376)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~ 331 (376)
.+.+.+. +.|+++++|++|..++.+..
T Consensus 97 ---------------------------------------------------~~~~~~~--~~pv~~i~g~~D~~~~~~~~ 123 (145)
T PF12695_consen 97 ---------------------------------------------------SEDLAKI--RIPVLFIHGENDPLVPPEQV 123 (145)
T ss_dssp ---------------------------------------------------CHHHTTT--TSEEEEEEETT-SSSHHHHH
T ss_pred ---------------------------------------------------hhhhhcc--CCcEEEEEECCCCcCCHHHH
Confidence 0012233 78999999999999999999
Q ss_pred HHHhcccC-CceEEEeCCC-CC
Q 017180 332 EALKGAKG-VTKFVEVPGA-LL 351 (376)
Q Consensus 332 ~~~~~~~~-~~~~~~~~~~-H~ 351 (376)
+++.+..+ +.++++++++ |+
T Consensus 124 ~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 124 RRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp HHHHHHHCSSEEEEEETTS-TT
T ss_pred HHHHHHcCCCcEEEEeCCCcCc
Confidence 98866554 6899999999 96
No 65
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.78 E-value=2.1e-17 Score=167.81 Aligned_cols=268 Identities=12% Similarity=0.136 Sum_probs=150.7
Q ss_pred CCcEEEecCCCCCccchHhHHH-----HHHHHhhhCCcceEEEEeCCCCCcCCCCCCC--CCCHHHHHHHHHHHHhCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLV-----AQDIVQRVGKVNWRATIVDWPGLGYSDRPKM--DYNADVMEKFVVDLINAPDS 162 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~-----~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~--~~~~~~~~~~l~~~l~~l~~ 162 (376)
++||||+||++ .+...|+.+ ++.|.+. ||+|+++| +|.|+.+.. ..++++++..+.+.++.+..
T Consensus 67 ~~plllvhg~~--~~~~~~d~~~~~s~v~~L~~~----g~~v~~~d---~G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~ 137 (994)
T PRK07868 67 GPPVLMVHPMM--MSADMWDVTRDDGAVGILHRA----GLDPWVID---FGSPDKVEGGMERNLADHVVALSEAIDTVKD 137 (994)
T ss_pred CCcEEEECCCC--CCccceecCCcccHHHHHHHC----CCEEEEEc---CCCCChhHcCccCCHHHHHHHHHHHHHHHHH
Confidence 68999999999 999999875 7888776 89999999 477765432 45777777666666654210
Q ss_pred CCCCCCCcEEEEecchHHHHHHHHHHhC-CCCcceEEEeccCCCC--CCCc-ccCCC--Cchhhhh-HHHHhhhccCc-h
Q 017180 163 PVSSSESDLVIFGGGHAATLTVRAAKKN-LVKPTAIAAVAPTWAG--PLPI-VFGRD--SSMETRY-GLLRGTLRAPG-V 234 (376)
Q Consensus 163 ~~~~~~~~~~lvG~S~Gg~ia~~~a~~~-p~~v~~lvl~~p~~~~--~~~~-~~~~~--~~~~~~~-~~~~~~~~~~~-~ 234 (376)
. ..++++++||||||.+++.++..+ +++|+++|++++.... ..+. .+... ....... ..... ...|. .
T Consensus 138 ~---~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~ 213 (994)
T PRK07868 138 V---TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNR-LDIPGWM 213 (994)
T ss_pred h---hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhc-CCCCHHH
Confidence 0 146799999999999999998744 5689999988764311 1010 00000 0000000 00111 11111 1
Q ss_pred hhHHhhhhhccHHHHHH--HHHhcccCCCCCCChHHHHHHHHHH---hccCC--CchhHHHhh--ccCCCCCcHHHHHHH
Q 017180 235 GWMMYNMLVSNEKAIQS--QYKSHVYSNPDNVTPGIVESRYALT---KRKGA--RYVPAAFLT--GLLDPVNSREEFLQL 305 (376)
Q Consensus 235 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~ 305 (376)
....+..+.. ...+.. .+...........+++....+.... ..++. ......+.. ...........-...
T Consensus 214 ~~~~~~~l~p-~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~ 292 (994)
T PRK07868 214 ARTGFQMLDP-VKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVT 292 (994)
T ss_pred HHHHHHhcCh-hHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcc
Confidence 1111211100 001110 1111222212223333333333222 11110 111111111 000000000000123
Q ss_pred HhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceE-EEeCCC-CCCCC---CChHHHHHHHHHHHHhhcC
Q 017180 306 FADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKF-VEVPGA-LLPQE---EYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 306 ~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~-H~~~~---e~pe~~~~~i~~fl~~~~~ 373 (376)
+++| ++|+|+|+|++|.+++++..+.+.+..++.++ .+++++ |+.++ ..++++...|.+||.+..+
T Consensus 293 L~~i--~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 293 LADI--TCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred hhhC--CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhcc
Confidence 6777 99999999999999999999999988999987 577887 99655 3578899999999998654
No 66
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.77 E-value=2.8e-17 Score=138.76 Aligned_cols=242 Identities=11% Similarity=0.103 Sum_probs=135.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.|.||++||+.++.....-+.++..+.++ ||.|++++.||||.+.... .-|+ .-+.+|+..+++.+..+. ..
T Consensus 75 ~P~vVl~HGL~G~s~s~y~r~L~~~~~~r----g~~~Vv~~~Rgcs~~~n~~p~~yh-~G~t~D~~~~l~~l~~~~--~~ 147 (345)
T COG0429 75 KPLVVLFHGLEGSSNSPYARGLMRALSRR----GWLVVVFHFRGCSGEANTSPRLYH-SGETEDIRFFLDWLKARF--PP 147 (345)
T ss_pred CceEEEEeccCCCCcCHHHHHHHHHHHhc----CCeEEEEecccccCCcccCcceec-ccchhHHHHHHHHHHHhC--CC
Confidence 67899999998666666667788888887 9999999999999987432 2222 222355555555442111 47
Q ss_pred CcEEEEecchHH-HHHHHHHHhCC--CCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCch----hhHHhhh
Q 017180 169 SDLVIFGGGHAA-TLTVRAAKKNL--VKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGV----GWMMYNM 241 (376)
Q Consensus 169 ~~~~lvG~S~Gg-~ia~~~a~~~p--~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 241 (376)
+++..||.|+|| +++..++.+.- ..-.++++.+|.-. ......+..... ...+.+.
T Consensus 148 r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl-----------------~~~~~~l~~~~s~~ly~r~l~~~ 210 (345)
T COG0429 148 RPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDL-----------------EACAYRLDSGFSLRLYSRYLLRN 210 (345)
T ss_pred CceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHH-----------------HHHHHHhcCchhhhhhHHHHHHH
Confidence 899999999999 55555555322 22334444454210 011111111111 1111111
Q ss_pred hhccHHHHHHHHHhcccCCCCCCChH---HHHHHHHHHhcc--------CCCchhHHHhhccCCCCCcHHHHHHHHhccc
Q 017180 242 LVSNEKAIQSQYKSHVYSNPDNVTPG---IVESRYALTKRK--------GARYVPAAFLTGLLDPVNSREEFLQLFADLE 310 (376)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 310 (376)
+ ...+...+. .+ ....... .++.+.....-. +...+...+-.. .-.+.+++|
T Consensus 211 L---~~~~~~kl~--~l--~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~a---------Ss~~~L~~I- 273 (345)
T COG0429 211 L---KRNAARKLK--EL--EPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQA---------SSLPLLPKI- 273 (345)
T ss_pred H---HHHHHHHHH--hc--CcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhc---------ccccccccc-
Confidence 1 111111111 11 1111111 111111111100 111111111111 123456777
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHhc-ccCCceEEEeCCC-CCCCCC----ChH-HHHHHHHHHHHhhcC
Q 017180 311 GKLPLLVVSTEGSPRRSKAEMEALKG-AKGVTKFVEVPGA-LLPQEE----YPA-MVAQELYQFLQQTFE 373 (376)
Q Consensus 311 ~~~Pvlii~G~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~-H~~~~e----~pe-~~~~~i~~fl~~~~~ 373 (376)
.+|+|||+..+|++++.+....... ..|++.+...+.| |+-++. +|. ..-+.|.+||+...+
T Consensus 274 -r~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 274 -RKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred -ccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 9999999999999999988887765 7889999999888 997776 443 456788899887643
No 67
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.75 E-value=2.6e-16 Score=130.22 Aligned_cols=116 Identities=14% Similarity=0.328 Sum_probs=99.2
Q ss_pred eEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC-CCCCCCHHHHHHHHH
Q 017180 76 NIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR-PKMDYNADVMEKFVV 154 (376)
Q Consensus 76 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~-~~~~~~~~~~~~~l~ 154 (376)
+-.|.+..+... +..+||-+||-+ ++...|+.+.+.|.+. |.|+|.+.+||+|.++. +...|+-++-..-+.
T Consensus 22 ~a~y~D~~~~gs-~~gTVv~~hGsP--GSH~DFkYi~~~l~~~----~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~ 94 (297)
T PF06342_consen 22 QAVYEDSLPSGS-PLGTVVAFHGSP--GSHNDFKYIRPPLDEA----GIRFIGINYPGFGFTPGYPDQQYTNEERQNFVN 94 (297)
T ss_pred EEEEEecCCCCC-CceeEEEecCCC--CCccchhhhhhHHHHc----CeEEEEeCCCCCCCCCCCcccccChHHHHHHHH
Confidence 446777654321 033799999999 9999999999999997 99999999999999994 456899999999999
Q ss_pred HHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCC
Q 017180 155 DLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWA 205 (376)
Q Consensus 155 ~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~ 205 (376)
++++.++ ..++++.+|||.||-.|+.+|..+| +.++++++|.+.
T Consensus 95 ~ll~~l~-----i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 95 ALLDELG-----IKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred HHHHHcC-----CCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCcc
Confidence 9999998 4678999999999999999999886 569999999763
No 68
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.75 E-value=3e-16 Score=129.55 Aligned_cols=261 Identities=16% Similarity=0.124 Sum_probs=168.3
Q ss_pred eEEEEecccCCCCCCCcEEEecCCCCCccchH-hHHH-----HHHHHhhhCCcceEEEEeCCCCCcCCC--CCC--CCCC
Q 017180 76 NIYYEKHERESPDPSKNILMIPTISDVSTVEE-WRLV-----AQDIVQRVGKVNWRATIVDWPGLGYSD--RPK--MDYN 145 (376)
Q Consensus 76 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~-~~~~-----~~~L~~~~~~~~~~Vi~~D~~G~G~S~--~~~--~~~~ 145 (376)
.++....|+.+. ++|+||-.|.++ -+... |..+ +..+.+ +|-|+.+|.|||-.-. -|. .-.+
T Consensus 33 ~v~V~V~Gd~~~-~kpaiiTyhDlg--lN~~scFq~ff~~p~m~ei~~-----~fcv~HV~~PGqe~gAp~~p~~y~yPs 104 (326)
T KOG2931|consen 33 VVHVTVYGDPKG-NKPAIITYHDLG--LNHKSCFQGFFNFPDMAEILE-----HFCVYHVDAPGQEDGAPSFPEGYPYPS 104 (326)
T ss_pred cEEEEEecCCCC-CCceEEEecccc--cchHhHhHHhhcCHhHHHHHh-----heEEEecCCCccccCCccCCCCCCCCC
Confidence 567888887664 367788889999 65544 5433 445555 6999999999996544 232 2568
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHH
Q 017180 146 ADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLL 225 (376)
Q Consensus 146 ~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~ 225 (376)
.++++++|..++++++ .+.++-+|-..|+.|..++|..||++|.+|||+++... ..++.+. .
T Consensus 105 md~LAd~l~~VL~~f~------lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~--------a~gwiew----~ 166 (326)
T KOG2931|consen 105 MDDLADMLPEVLDHFG------LKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPC--------AKGWIEW----A 166 (326)
T ss_pred HHHHHHHHHHHHHhcC------cceEEEecccccHHHHHHHHhcChhheeEEEEEecCCC--------CchHHHH----H
Confidence 9999999999999997 78899999999999999999999999999999988421 1111111 1
Q ss_pred HhhhccCchhhHHhhhhhccHHHHHHHHHhcccC-CCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHH
Q 017180 226 RGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYS-NPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQ 304 (376)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (376)
.. .+....++... ....+...+....+. +...-..++++.|...+...........|+.++.....-..+...
T Consensus 167 ~~----K~~s~~l~~~G--mt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~ 240 (326)
T KOG2931|consen 167 YN----KVSSNLLYYYG--MTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPK 240 (326)
T ss_pred HH----HHHHHHHHhhc--hhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCC
Confidence 10 11111111110 011222222222222 222346778888887776655545555555554332210000111
Q ss_pred HHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 305 LFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 305 ~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
....+ +||+|++.|++.+.+..-..-.-+-...+..+..+.++ -++.+++|.++++.+.-|++.
T Consensus 241 ~~~tl--kc~vllvvGd~Sp~~~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 241 LGTTL--KCPVLLVVGDNSPHVSAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred cCccc--cccEEEEecCCCchhhhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHcc
Confidence 11145 79999999999987763222211222346788999998 999999999999999999975
No 69
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=8.8e-16 Score=132.02 Aligned_cols=279 Identities=15% Similarity=0.108 Sum_probs=168.4
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchH--------h-HHHHHHHHhhhCCcceEEEEeCCCCCc-CCCCCC--
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEE--------W-RLVAQDIVQRVGKVNWRATIVDWPGLG-YSDRPK-- 141 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~--------~-~~~~~~L~~~~~~~~~~Vi~~D~~G~G-~S~~~~-- 141 (376)
..+|.|+.+|.-+.+....||++||+.+..+... | +.++.. .+......|.||++|-.|.+ .|+.|.
T Consensus 35 ~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGp-G~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 35 DARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGP-GKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred CcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCC-CCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 5678999999876644557888899994333322 3 333211 00011126999999999987 454332
Q ss_pred -----------CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEE-EEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCC
Q 017180 142 -----------MDYNADVMEKFVVDLINAPDSPVSSSESDLV-IFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLP 209 (376)
Q Consensus 142 -----------~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~ 209 (376)
..+++.+++..-..++++++ .+++. |||.||||+.++.++..+|++|.++|.++.+..
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LG------I~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r---- 183 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQRLLLDALG------IKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAAR---- 183 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHhcC------cceEeeeeccChHHHHHHHHHHhChHHHhhhheeccccc----
Confidence 24788898888888999998 56655 899999999999999999999999999876421
Q ss_pred cccCCCCchhhh-hHHHH-hhhccCch-------------hhHHhhhh----hccHHHHHHHHHhcccCCCCCC--ChHH
Q 017180 210 IVFGRDSSMETR-YGLLR-GTLRAPGV-------------GWMMYNML----VSNEKAIQSQYKSHVYSNPDNV--TPGI 268 (376)
Q Consensus 210 ~~~~~~~~~~~~-~~~~~-~~~~~~~~-------------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~ 268 (376)
...+... ....+ .+...|.+ +-.+.+.+ ...+..+...+.+....++... ....
T Consensus 184 -----~s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~ 258 (368)
T COG2021 184 -----LSAQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFA 258 (368)
T ss_pred -----CCHHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHH
Confidence 0111110 11111 11111111 11111110 0112222222322221111111 1233
Q ss_pred HHHHHHHHhcc----CCCchhHHHhh--ccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCce
Q 017180 269 VESRYALTKRK----GARYVPAAFLT--GLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTK 342 (376)
Q Consensus 269 ~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~ 342 (376)
++.|.+..... --...+..+.. ...+......++.+.++++ +.|+|++.-+.|...|++..+.+.+.++.+.
T Consensus 259 vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i--~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~ 336 (368)
T COG2021 259 VESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARI--KAPVLVVGITSDWLFPPELQRALAEALPAAG 336 (368)
T ss_pred HHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcC--ccCEEEEEecccccCCHHHHHHHHHhccccC
Confidence 44443322211 11112222211 2233333345678889999 9999999999999999999999988887766
Q ss_pred -EEEeCCC--CCCCCCChHHHHHHHHHHHHh
Q 017180 343 -FVEVPGA--LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 343 -~~~~~~~--H~~~~e~pe~~~~~i~~fl~~ 370 (376)
+++++.- |-.++...+.+...|..||..
T Consensus 337 ~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 337 ALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred ceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 7777753 998888888899999999975
No 70
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.73 E-value=2.2e-15 Score=131.22 Aligned_cols=133 Identities=16% Similarity=0.151 Sum_probs=87.3
Q ss_pred ccceEEeecCCceeEEEEecccCC--CCCCCcEEEecCCCCCccchHhHH--HHHHHHhhhCCcceEEEEeCC--CCCcC
Q 017180 63 TGNWQWKFKENSINIYYEKHERES--PDPSKNILMIPTISDVSTVEEWRL--VAQDIVQRVGKVNWRATIVDW--PGLGY 136 (376)
Q Consensus 63 ~~~~~~~~~~~g~~l~y~~~g~~~--~~~~~~vvllHG~~~~~~~~~~~~--~~~~L~~~~~~~~~~Vi~~D~--~G~G~ 136 (376)
..++.+.-...+.++.|...-++. .++.|+|+|+||++ ++...|.. .+..+++. .|+.|+++|. +|+|.
T Consensus 13 ~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~--~~~~~~~~~~~~~~la~~---~g~~Vv~Pd~~~~g~~~ 87 (275)
T TIGR02821 13 QGFYRHKSETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLT--CTHENFMIKAGAQRFAAE---HGLALVAPDTSPRGTGI 87 (275)
T ss_pred EEEEEEeccccCCceEEEEEcCCCccCCCCCEEEEccCCC--CCccHHHhhhHHHHHHhh---cCcEEEEeCCCCCcCCC
Confidence 344445444445565565554321 22368899999999 77777743 23445432 1799999998 56554
Q ss_pred CCCC--------------------CCCCCHHH-HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcc
Q 017180 137 SDRP--------------------KMDYNADV-MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPT 195 (376)
Q Consensus 137 S~~~--------------------~~~~~~~~-~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~ 195 (376)
+... ...+.... ..+++..++++.. ....++++++||||||.+++.++.++|+.++
T Consensus 88 ~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~ 164 (275)
T TIGR02821 88 AGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQF---PLDGERQGITGHSMGGHGALVIALKNPDRFK 164 (275)
T ss_pred CCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhC---CCCCCceEEEEEChhHHHHHHHHHhCcccce
Confidence 3211 01223333 3567777776621 0125689999999999999999999999999
Q ss_pred eEEEeccC
Q 017180 196 AIAAVAPT 203 (376)
Q Consensus 196 ~lvl~~p~ 203 (376)
++++++|.
T Consensus 165 ~~~~~~~~ 172 (275)
T TIGR02821 165 SVSAFAPI 172 (275)
T ss_pred EEEEECCc
Confidence 99999884
No 71
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.72 E-value=3.1e-16 Score=123.38 Aligned_cols=216 Identities=12% Similarity=0.080 Sum_probs=137.9
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
...+|++||+-..-+......++..|.+. |+.++.+|++|.|+|+..-..-.....++||..+++.+... ...
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~----gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~---nr~ 105 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIMKNVAKALEKE----GISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNS---NRV 105 (269)
T ss_pred ceEEEEeeccccccchHHHHHHHHHHHhc----CceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccC---ceE
Confidence 45799999999444455667788888887 99999999999999985432222333458999999887511 112
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHH
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAI 249 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (376)
--+++|||-||.+++.+|.++.+ ++.+|-+++-+.. ...+.. + + .+..+
T Consensus 106 v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl------------------------~~~I~e---R-l--g~~~l 154 (269)
T KOG4667|consen 106 VPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDL------------------------KNGINE---R-L--GEDYL 154 (269)
T ss_pred EEEEEeecCccHHHHHHHHhhcC-chheEEcccccch------------------------hcchhh---h-h--cccHH
Confidence 24668999999999999999887 6777777653210 011100 0 0 12223
Q ss_pred HHHHHhcccCCC-------CCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCC
Q 017180 250 QSQYKSHVYSNP-------DNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEG 322 (376)
Q Consensus 250 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~ 322 (376)
.+.....++..+ ...+++.+.... +. ++.+...+|..+||||-+||..
T Consensus 155 ~~ike~Gfid~~~rkG~y~~rvt~eSlmdrL--------------------nt-----d~h~aclkId~~C~VLTvhGs~ 209 (269)
T KOG4667|consen 155 ERIKEQGFIDVGPRKGKYGYRVTEESLMDRL--------------------NT-----DIHEACLKIDKQCRVLTVHGSE 209 (269)
T ss_pred HHHHhCCceecCcccCCcCceecHHHHHHHH--------------------hc-----hhhhhhcCcCccCceEEEeccC
Confidence 321222222111 112222111110 10 1334444565699999999999
Q ss_pred CCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 323 SPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 323 D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
|.++|.+.++++++.+++.++.++||+ |.....+-+ .......|..
T Consensus 210 D~IVPve~AkefAk~i~nH~L~iIEgADHnyt~~q~~-l~~lgl~f~k 256 (269)
T KOG4667|consen 210 DEIVPVEDAKEFAKIIPNHKLEIIEGADHNYTGHQSQ-LVSLGLEFIK 256 (269)
T ss_pred CceeechhHHHHHHhccCCceEEecCCCcCccchhhh-HhhhcceeEE
Confidence 999999999999999999999999999 986554433 4444444443
No 72
>PRK11460 putative hydrolase; Provisional
Probab=99.71 E-value=1.6e-16 Score=134.38 Aligned_cols=107 Identities=11% Similarity=0.051 Sum_probs=69.0
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-----------CCCCC---HHHHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-----------KMDYN---ADVMEKFVVD 155 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-----------~~~~~---~~~~~~~l~~ 155 (376)
.+.|||+||++ ++...|..+++.|.+. ++++..++++|...+... ..... ++...+.+.+
T Consensus 16 ~~~vIlLHG~G--~~~~~~~~l~~~l~~~----~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~ 89 (232)
T PRK11460 16 QQLLLLFHGVG--DNPVAMGEIGSWFAPA----FPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIE 89 (232)
T ss_pred CcEEEEEeCCC--CChHHHHHHHHHHHHH----CCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHH
Confidence 67899999999 9999999999999875 555555556665322100 00111 1222222333
Q ss_pred HHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 156 LINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 156 ~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
+++.+..+.....++++++|+|+||.+++.++.++|+.+.+++.+++
T Consensus 90 ~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg 136 (232)
T PRK11460 90 TVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSG 136 (232)
T ss_pred HHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecc
Confidence 33322111112356899999999999999999999988777776654
No 73
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.70 E-value=3.4e-16 Score=131.42 Aligned_cols=256 Identities=19% Similarity=0.191 Sum_probs=146.7
Q ss_pred eEEEEecccCCCCCCCcEEEecCCCCCccchH-hHHH-----HHHHHhhhCCcceEEEEeCCCCCcCCC--CCC--CCCC
Q 017180 76 NIYYEKHERESPDPSKNILMIPTISDVSTVEE-WRLV-----AQDIVQRVGKVNWRATIVDWPGLGYSD--RPK--MDYN 145 (376)
Q Consensus 76 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~-~~~~-----~~~L~~~~~~~~~~Vi~~D~~G~G~S~--~~~--~~~~ 145 (376)
.+++...|+.+. .+|+||-.|-.| -+... |..+ +..+.+ +|-|+-+|.||+..-. -|. ...|
T Consensus 10 ~v~V~v~G~~~~-~kp~ilT~HDvG--lNh~scF~~ff~~~~m~~i~~-----~f~i~Hi~aPGqe~ga~~~p~~y~yPs 81 (283)
T PF03096_consen 10 SVHVTVQGDPKG-NKPAILTYHDVG--LNHKSCFQGFFNFEDMQEILQ-----NFCIYHIDAPGQEEGAATLPEGYQYPS 81 (283)
T ss_dssp EEEEEEESS--T-TS-EEEEE--TT----HHHHCHHHHCSHHHHHHHT-----TSEEEEEE-TTTSTT-----TT-----
T ss_pred EEEEEEEecCCC-CCceEEEecccc--ccchHHHHHHhcchhHHHHhh-----ceEEEEEeCCCCCCCcccccccccccC
Confidence 677888887653 267888899999 66554 5443 455666 7999999999997654 222 3568
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHH
Q 017180 146 ADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLL 225 (376)
Q Consensus 146 ~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~ 225 (376)
++++++++.+++++++ .+.++.+|-..|+.|..++|..+|++|.++||++|.. ...++.+.....+
T Consensus 82 md~LAe~l~~Vl~~f~------lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~--------~~~gw~Ew~~~K~ 147 (283)
T PF03096_consen 82 MDQLAEMLPEVLDHFG------LKSVIGFGVGAGANILARFALKHPERVLGLILVNPTC--------TAAGWMEWFYQKL 147 (283)
T ss_dssp HHHHHCTHHHHHHHHT---------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES-----------S---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCC------ccEEEEEeeccchhhhhhccccCccceeEEEEEecCC--------CCccHHHHHHHHH
Confidence 9999999999999998 7889999999999999999999999999999999853 1112222221111
Q ss_pred H-hhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHH
Q 017180 226 R-GTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQ 304 (376)
Q Consensus 226 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (376)
. ..+....+..... +..+...+.+... ....++++.+...............|+..+.. +.++..
T Consensus 148 ~~~~L~~~gmt~~~~------d~Ll~h~Fg~~~~----~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~----R~DL~~ 213 (283)
T PF03096_consen 148 SSWLLYSYGMTSSVK------DYLLWHYFGKEEE----ENNSDLVQTYRQHLDERINPKNLALFLNSYNS----RTDLSI 213 (283)
T ss_dssp H-------CTTS-HH------HHHHHHHS-HHHH----HCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT---------S
T ss_pred hcccccccccccchH------Hhhhhcccccccc----cccHHHHHHHHHHHhcCCCHHHHHHHHHHHhc----cccchh
Confidence 1 0111111111111 1111111211111 12455677776666554443444555444322 223555
Q ss_pred HHhcccCCCcEEEEEeCCCCCCCHHHHHHHh-cc-cCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 305 LFADLEGKLPLLVVSTEGSPRRSKAEMEALK-GA-KGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 305 ~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~-~~-~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
..+.. .||+|++.|++.+..... .++. +. ..+.++..++++ =++.+|+|+++++.+.-||+..
T Consensus 214 ~~~~~--~c~vLlvvG~~Sp~~~~v--v~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 214 ERPSL--GCPVLLVVGDNSPHVDDV--VEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp ECTTC--CS-EEEEEETTSTTHHHH--HHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred hcCCC--CCCeEEEEecCCcchhhH--HHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 56666 899999999999876532 2332 22 236789999999 9999999999999999999853
No 74
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.69 E-value=4.3e-15 Score=120.71 Aligned_cols=223 Identities=13% Similarity=0.127 Sum_probs=143.1
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhC-CCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINA-PDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~-l~~~~~~~~ 168 (376)
+..++++|=.| ++...|+.....|.. .+.++++++||+|.--......+++.+++.|..-+.. . ..
T Consensus 7 ~~~L~cfP~AG--Gsa~~fr~W~~~lp~-----~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~------~d 73 (244)
T COG3208 7 RLRLFCFPHAG--GSASLFRSWSRRLPA-----DIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPL------LD 73 (244)
T ss_pred CceEEEecCCC--CCHHHHHHHHhhCCc-----hhheeeecCCCcccccCCcccccHHHHHHHHHHHhcccc------CC
Confidence 56789998888 888888888888887 6999999999999765444567888998888877773 3 37
Q ss_pred CcEEEEecchHHHHHHHHHHhC---CCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhcc
Q 017180 169 SDLVIFGGGHAATLTVRAAKKN---LVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSN 245 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~---p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (376)
+++.++||||||++|.++|.+. -..+..+.+.+... |..... ...... +.
T Consensus 74 ~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~a----P~~~~~---------------------~~i~~~--~D 126 (244)
T COG3208 74 APFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRA----PHYDRG---------------------KQIHHL--DD 126 (244)
T ss_pred CCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCC----CCCccc---------------------CCccCC--CH
Confidence 8999999999999999999831 12255666554321 110000 000000 11
Q ss_pred HHHHHHHHHhcccCCCC-CCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCC
Q 017180 246 EKAIQSQYKSHVYSNPD-NVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSP 324 (376)
Q Consensus 246 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~ 324 (376)
..++.. +.......+. .-++|+++........ . ......+.-. .-..+ .||+.++.|++|.
T Consensus 127 ~~~l~~-l~~lgG~p~e~led~El~~l~LPilRA-D-----~~~~e~Y~~~---------~~~pl--~~pi~~~~G~~D~ 188 (244)
T COG3208 127 ADFLAD-LVDLGGTPPELLEDPELMALFLPILRA-D-----FRALESYRYP---------PPAPL--ACPIHAFGGEKDH 188 (244)
T ss_pred HHHHHH-HHHhCCCChHHhcCHHHHHHHHHHHHH-H-----HHHhcccccC---------CCCCc--CcceEEeccCcch
Confidence 222221 1111111111 1223333333222211 0 0001111100 01244 8999999999999
Q ss_pred CCCHHHHHHHhcccC-CceEEEeCCCCCCCCCChHHHHHHHHHHHHh
Q 017180 325 RRSKAEMEALKGAKG-VTKFVEVPGALLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 325 ~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~ 370 (376)
.+..+....+++... ..+++.++|+|+...++.+++...|.+.+..
T Consensus 189 ~vs~~~~~~W~~~t~~~f~l~~fdGgHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 189 EVSRDELGAWREHTKGDFTLRVFDGGHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred hccHHHHHHHHHhhcCCceEEEecCcceehhhhHHHHHHHHHHHhhh
Confidence 999999998876544 7899999999999999999999999998863
No 75
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.68 E-value=5.8e-15 Score=129.54 Aligned_cols=247 Identities=13% Similarity=0.136 Sum_probs=136.3
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.|.||++||+.+.+....-+.++..+.+. ||+|+++..||+|.|. ..+..|+. .+.+|+.++++++..++ +.
T Consensus 125 ~P~vvilpGltg~S~~~YVr~lv~~a~~~----G~r~VVfN~RG~~g~~LtTpr~f~a-g~t~Dl~~~v~~i~~~~--P~ 197 (409)
T KOG1838|consen 125 DPIVVILPGLTGGSHESYVRHLVHEAQRK----GYRVVVFNHRGLGGSKLTTPRLFTA-GWTEDLREVVNHIKKRY--PQ 197 (409)
T ss_pred CcEEEEecCCCCCChhHHHHHHHHHHHhC----CcEEEEECCCCCCCCccCCCceeec-CCHHHHHHHHHHHHHhC--CC
Confidence 68999999988555555566777777776 9999999999999998 33333332 34566776666665444 46
Q ss_pred CcEEEEecchHHHHHHHHHHhC---CCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhcc
Q 017180 169 SDLVIFGGGHAATLTVRAAKKN---LVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSN 245 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~---p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (376)
.++..||.||||.+...|..+- ...+.++++++|.-.- .....+..+......-+.+...
T Consensus 198 a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~-----------------~~~~~~~~~~~~~~y~~~l~~~ 260 (409)
T KOG1838|consen 198 APLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLL-----------------AASRSIETPLYRRFYNRALTLN 260 (409)
T ss_pred CceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhh-----------------hhhhHHhcccchHHHHHHHHHh
Confidence 7899999999999999998743 3345666666662100 0111111111111111111000
Q ss_pred -HHHHHHHHHhcccCCCCCC----ChHHHHHHHHHHhcc-CCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEE
Q 017180 246 -EKAIQSQYKSHVYSNPDNV----TPGIVESRYALTKRK-GARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVS 319 (376)
Q Consensus 246 -~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~ 319 (376)
...+. ......+.+.... ....+..+.+....+ .+......++.. ....+.+.+| ++|+|+|+
T Consensus 261 l~~~~~-~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~--------aSs~~~v~~I--~VP~L~in 329 (409)
T KOG1838|consen 261 LKRIVL-RHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKK--------ASSSNYVDKI--KVPLLCIN 329 (409)
T ss_pred HHHHHh-hhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhh--------cchhhhcccc--cccEEEEe
Confidence 00000 0000011110000 001111111111111 111111111111 1134466777 99999999
Q ss_pred eCCCCCCCHHHHH-HHhcccCCceEEEeCCC-CCCCCCC----hHHHHHH-HHHHHHhh
Q 017180 320 TEGSPRRSKAEME-ALKGAKGVTKFVEVPGA-LLPQEEY----PAMVAQE-LYQFLQQT 371 (376)
Q Consensus 320 G~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~-H~~~~e~----pe~~~~~-i~~fl~~~ 371 (376)
..+|+++|.+..- .....+|++-+++-..| |..++|. +....+. +.+|+...
T Consensus 330 a~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 330 AADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNA 388 (409)
T ss_pred cCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHH
Confidence 9999999985433 33566788888877777 9988776 2334444 77777654
No 76
>PLN02442 S-formylglutathione hydrolase
Probab=99.68 E-value=6.6e-15 Score=128.50 Aligned_cols=102 Identities=22% Similarity=0.236 Sum_probs=70.7
Q ss_pred CCcEEEecCCCCCccchHhHH---HHHHHHhhhCCcceEEEEeCCCCCcC-----CCC---------------CC-----
Q 017180 90 SKNILMIPTISDVSTVEEWRL---VAQDIVQRVGKVNWRATIVDWPGLGY-----SDR---------------PK----- 141 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~---~~~~L~~~~~~~~~~Vi~~D~~G~G~-----S~~---------------~~----- 141 (376)
-|+|+|+||++ ++...|.. +...+... |+.|+++|..++|. ++. +.
T Consensus 47 ~Pvv~~lHG~~--~~~~~~~~~~~~~~~~~~~----g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (283)
T PLN02442 47 VPVLYWLSGLT--CTDENFIQKSGAQRAAAAR----GIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWR 120 (283)
T ss_pred CCEEEEecCCC--cChHHHHHhhhHHHHHhhc----CeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccc
Confidence 67899999999 77766643 33455554 89999999887761 110 00
Q ss_pred -CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 142 -MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 142 -~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
..+-.+++.+.+..+.+.+. .++++|+||||||..|+.++.++|+++++++.++|.
T Consensus 121 ~~~~~~~~l~~~i~~~~~~~~------~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 121 MYDYVVKELPKLLSDNFDQLD------TSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred hhhhHHHHHHHHHHHHHHhcC------CCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 01112233333334334443 577999999999999999999999999999999884
No 77
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.67 E-value=7e-15 Score=141.67 Aligned_cols=238 Identities=16% Similarity=0.079 Sum_probs=147.0
Q ss_pred CccceEEeecCCceeEEEEecccCCCCC---CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC
Q 017180 62 KTGNWQWKFKENSINIYYEKHERESPDP---SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD 138 (376)
Q Consensus 62 ~~~~~~~~~~~~g~~l~y~~~g~~~~~~---~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~ 138 (376)
..+.+.+. ..+|.+++....-+.+.++ =|.||++||.+.......|...++.|+.+ ||.|+.+++||.+.-.
T Consensus 364 ~~e~~~~~-~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~----G~~V~~~n~RGS~GyG 438 (620)
T COG1506 364 EPEPVTYK-SNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASA----GYAVLAPNYRGSTGYG 438 (620)
T ss_pred CceEEEEE-cCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcC----CeEEEEeCCCCCCccH
Confidence 33444444 4568788776665543321 27899999998444445577778888887 9999999999765421
Q ss_pred -----CC---CCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCc
Q 017180 139 -----RP---KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPI 210 (376)
Q Consensus 139 -----~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~ 210 (376)
.. ......++..+.+. ++++.+ ....+++.++|||.||.+++..+.+.| .+++.+...+...
T Consensus 439 ~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~---~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~----- 508 (620)
T COG1506 439 REFADAIRGDWGGVDLEDLIAAVD-ALVKLP---LVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVD----- 508 (620)
T ss_pred HHHHHhhhhccCCccHHHHHHHHH-HHHhCC---CcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcch-----
Confidence 11 12345566655565 555544 233568999999999999999999888 6677666655210
Q ss_pred ccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhh
Q 017180 211 VFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLT 290 (376)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (376)
++. +... ....... ........ +.. ..+... .
T Consensus 509 -------------~~~------------~~~~-~~~~~~~-~~~~~~~~-~~~-~~~~~~---~---------------- 540 (620)
T COG1506 509 -------------WLL------------YFGE-STEGLRF-DPEENGGG-PPE-DREKYE---D---------------- 540 (620)
T ss_pred -------------hhh------------hccc-cchhhcC-CHHHhCCC-ccc-ChHHHH---h----------------
Confidence 000 0000 0000000 00000000 000 000000 0
Q ss_pred ccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHh----cccCCceEEEeCCC-CCCCC-CChHHHHHHH
Q 017180 291 GLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALK----GAKGVTKFVEVPGA-LLPQE-EYPAMVAQEL 364 (376)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~~~~~-H~~~~-e~pe~~~~~i 364 (376)
. .......++ ++|+|+|||++|..|+.+...++. ....+++++++|+. |.+.- ++-..+.+.+
T Consensus 541 ~---------sp~~~~~~i--~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~ 609 (620)
T COG1506 541 R---------SPIFYADNI--KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEI 609 (620)
T ss_pred c---------Chhhhhccc--CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHH
Confidence 0 022345567 999999999999999988877764 34557899999999 99655 5567789999
Q ss_pred HHHHHhhcC
Q 017180 365 YQFLQQTFE 373 (376)
Q Consensus 365 ~~fl~~~~~ 373 (376)
.+|+++.++
T Consensus 610 ~~~~~~~~~ 618 (620)
T COG1506 610 LDWFKRHLK 618 (620)
T ss_pred HHHHHHHhc
Confidence 999998764
No 78
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.64 E-value=1.4e-15 Score=137.23 Aligned_cols=113 Identities=16% Similarity=0.207 Sum_probs=83.4
Q ss_pred CCcEEEecCCCCCccchHhHH-HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRL-VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~-~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+|++|+||||+.......|.. +...|..... +++||++|++|+|.|..+........+++++.++++.+........
T Consensus 41 ~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~--d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 41 TKTFIVIHGWTVTGMFESWVPKLVAALYEREP--SANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCeEEEECCCCcCCcchhhHHHHHHHHHhccC--CCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 689999999983222356765 5555542111 5999999999999987554334446777777777776521111236
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
++++||||||||.+|..++...|++|.++++++|..
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 789999999999999999999999999999999854
No 79
>PLN00021 chlorophyllase
Probab=99.63 E-value=1.3e-14 Score=127.32 Aligned_cols=105 Identities=13% Similarity=0.071 Sum_probs=74.5
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHH---HHHHHHhCCCC-CCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK---FVVDLINAPDS-PVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~---~l~~~l~~l~~-~~~ 165 (376)
.|+|||+||++ .+...|..++..|+++ ||.|+++|++|++.+.. ....++..+ .+.+.++.+.. ...
T Consensus 52 ~PvVv~lHG~~--~~~~~y~~l~~~Las~----G~~VvapD~~g~~~~~~---~~~i~d~~~~~~~l~~~l~~~l~~~~~ 122 (313)
T PLN00021 52 YPVLLFLHGYL--LYNSFYSQLLQHIASH----GFIVVAPQLYTLAGPDG---TDEIKDAAAVINWLSSGLAAVLPEGVR 122 (313)
T ss_pred CCEEEEECCCC--CCcccHHHHHHHHHhC----CCEEEEecCCCcCCCCc---hhhHHHHHHHHHHHHhhhhhhcccccc
Confidence 68899999999 8888899999999987 89999999999764321 122333222 22222212110 001
Q ss_pred CCCCcEEEEecchHHHHHHHHHHhCCC-----CcceEEEeccC
Q 017180 166 SSESDLVIFGGGHAATLTVRAAKKNLV-----KPTAIAAVAPT 203 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~~~p~-----~v~~lvl~~p~ 203 (376)
...++++++||||||.+++.+|.++++ +++++|+++|.
T Consensus 123 ~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 123 PDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred cChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 134689999999999999999998764 57889998883
No 80
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.62 E-value=8.7e-15 Score=122.83 Aligned_cols=197 Identities=16% Similarity=0.112 Sum_probs=114.6
Q ss_pred hHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC----CCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHH
Q 017180 108 WRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP----KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLT 183 (376)
Q Consensus 108 ~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~----~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia 183 (376)
|......|+++ ||.|+.+|+||.+..... ..........+|+.+.++.+........+++.++|+|+||.++
T Consensus 3 f~~~~~~la~~----Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a 78 (213)
T PF00326_consen 3 FNWNAQLLASQ----GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLA 78 (213)
T ss_dssp -SHHHHHHHTT----T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHH
T ss_pred eeHHHHHHHhC----CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEccccccccc
Confidence 33566788776 999999999998854311 0111112334444444444321112346789999999999999
Q ss_pred HHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCC
Q 017180 184 VRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDN 263 (376)
Q Consensus 184 ~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
+.++.++|++++++|..+|........ ..... +.. .... . +..+.
T Consensus 79 ~~~~~~~~~~f~a~v~~~g~~d~~~~~------------------~~~~~-----~~~----~~~~----~---~~~~~- 123 (213)
T PF00326_consen 79 LLAATQHPDRFKAAVAGAGVSDLFSYY------------------GTTDI-----YTK----AEYL----E---YGDPW- 123 (213)
T ss_dssp HHHHHHTCCGSSEEEEESE-SSTTCSB------------------HHTCC-----HHH----GHHH----H---HSSTT-
T ss_pred chhhcccceeeeeeeccceecchhccc------------------ccccc-----ccc----cccc----c---cCccc-
Confidence 999999999999999998843110000 00000 000 0000 0 00000
Q ss_pred CChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc--ccCCCcEEEEEeCCCCCCCHHHHHHHh----cc
Q 017180 264 VTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD--LEGKLPLLVVSTEGSPRRSKAEMEALK----GA 337 (376)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~Pvlii~G~~D~~~~~~~~~~~~----~~ 337 (376)
..++..... . ....+.+ + ++|+|++||++|..+|.+....+. +.
T Consensus 124 ~~~~~~~~~-s---------------------------~~~~~~~~~~--~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~ 173 (213)
T PF00326_consen 124 DNPEFYREL-S---------------------------PISPADNVQI--KPPVLIIHGENDPRVPPSQSLRLYNALRKA 173 (213)
T ss_dssp TSHHHHHHH-H---------------------------HGGGGGGCGG--GSEEEEEEETTBSSSTTHHHHHHHHHHHHT
T ss_pred hhhhhhhhh-c---------------------------cccccccccC--CCCEEEEccCCCCccCHHHHHHHHHHHHhc
Confidence 011111000 0 0011222 4 789999999999999988777663 34
Q ss_pred cCCceEEEeCCC-CCCC-CCChHHHHHHHHHHHHhhcC
Q 017180 338 KGVTKFVEVPGA-LLPQ-EEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 338 ~~~~~~~~~~~~-H~~~-~e~pe~~~~~i~~fl~~~~~ 373 (376)
..+++++++|++ |... .+...+..+.+.+|+++.++
T Consensus 174 g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 174 GKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp TSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence 456899999999 9643 45566889999999998764
No 81
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.58 E-value=3.9e-14 Score=118.62 Aligned_cols=107 Identities=10% Similarity=-0.040 Sum_probs=71.5
Q ss_pred CCcEEEecCCCCCccchHhH---HHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CC---C--CCHHHHHHHHHHHHhCC
Q 017180 90 SKNILMIPTISDVSTVEEWR---LVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KM---D--YNADVMEKFVVDLINAP 160 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~---~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~---~--~~~~~~~~~l~~~l~~l 160 (376)
.|.||++||.+ .+...+. .+...+.+. ||.|+++|++|+|.+... .. . ........++.++++.+
T Consensus 13 ~P~vv~lHG~~--~~~~~~~~~~~~~~~a~~~----g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 86 (212)
T TIGR01840 13 RALVLALHGCG--QTASAYVIDWGWKAAADRY----GFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAV 86 (212)
T ss_pred CCEEEEeCCCC--CCHHHHhhhcChHHHHHhC----CeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHH
Confidence 67899999999 7666554 233344444 899999999999865421 00 0 00011223334444333
Q ss_pred CCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 161 DSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 161 ~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
........++++|+|||+||.+++.++.++|+.+.+++.+++
T Consensus 87 ~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g 128 (212)
T TIGR01840 87 KANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAG 128 (212)
T ss_pred HHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecC
Confidence 222222356899999999999999999999999999988876
No 82
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.56 E-value=9e-13 Score=113.44 Aligned_cols=111 Identities=14% Similarity=0.170 Sum_probs=92.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhh-CCcceEEEEeCCCCCcCCCCC------CCCCCHHHHHHHHHHHHhCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRV-GKVNWRATIVDWPGLGYSDRP------KMDYNADVMEKFVVDLINAPDS 162 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~-~~~~~~Vi~~D~~G~G~S~~~------~~~~~~~~~~~~l~~~l~~l~~ 162 (376)
+..||||+|++ +-...|..++..|.+.+ + ++.|+++.+.||-.++.. ...++.++..+--.++++++..
T Consensus 2 ~~li~~IPGNP--Glv~fY~~Fl~~L~~~l~~--~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~ 77 (266)
T PF10230_consen 2 RPLIVFIPGNP--GLVEFYEEFLSALYEKLNP--QFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIP 77 (266)
T ss_pred cEEEEEECCCC--ChHHHHHHHHHHHHHhCCC--CCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhh
Confidence 45789999999 99999999999999763 3 799999999999877633 3688999998888888877753
Q ss_pred CCCCCCCcEEEEecchHHHHHHHHHHhCC---CCcceEEEeccCC
Q 017180 163 PVSSSESDLVIFGGGHAATLTVRAAKKNL---VKPTAIAAVAPTW 204 (376)
Q Consensus 163 ~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p---~~v~~lvl~~p~~ 204 (376)
+......+++++|||+|+.+++++..+.+ .+|.+++++-|+.
T Consensus 78 ~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 78 QKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred hhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 21113678999999999999999999998 8899999999864
No 83
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.56 E-value=5.6e-15 Score=127.90 Aligned_cols=109 Identities=17% Similarity=0.209 Sum_probs=78.2
Q ss_pred CCcEEEecCCCCCccc-hHhHH-HHHHH-HhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTV-EEWRL-VAQDI-VQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSS 166 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~-~~~~~-~~~~L-~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 166 (376)
+|++|+||||+ ++. ..|.. +...+ .+. +++||++|++|++.+..+....+.+..++++.++++.+......
T Consensus 36 ~p~vilIHG~~--~~~~~~~~~~l~~~ll~~~----~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~ 109 (275)
T cd00707 36 RPTRFIIHGWT--SSGEESWISDLRKAYLSRG----DYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGL 109 (275)
T ss_pred CCcEEEEcCCC--CCCCCcHHHHHHHHHHhcC----CCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCC
Confidence 67899999999 666 56644 34434 333 79999999999854433323344555556666666554211111
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
..+++++|||||||.+|..++.+.|++|.++++++|..
T Consensus 110 ~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 110 SLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred ChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 35789999999999999999999999999999999864
No 84
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.55 E-value=3.6e-13 Score=113.42 Aligned_cols=180 Identities=16% Similarity=0.098 Sum_probs=113.2
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcC---CCCCCC--------CCCHHHHHHHHHHHHh
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGY---SDRPKM--------DYNADVMEKFVVDLIN 158 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~---S~~~~~--------~~~~~~~~~~l~~~l~ 158 (376)
.|.||++|++. +-....+.+++.|++. ||.|+++|+-+-.. ++.... ....+...+++.+.++
T Consensus 14 ~~~Vvv~~d~~--G~~~~~~~~ad~lA~~----Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~ 87 (218)
T PF01738_consen 14 RPAVVVIHDIF--GLNPNIRDLADRLAEE----GYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVD 87 (218)
T ss_dssp EEEEEEE-BTT--BS-HHHHHHHHHHHHT----T-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCC--CCchHHHHHHHHHHhc----CCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 68899999988 6667778889999997 99999999754433 111110 0013455566655555
Q ss_pred CCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHH
Q 017180 159 APDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMM 238 (376)
Q Consensus 159 ~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (376)
.+........+++.++|+|+||.+++.+|.+. ..+++.|..-|..
T Consensus 88 ~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~---------------------------------- 132 (218)
T PF01738_consen 88 YLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGS---------------------------------- 132 (218)
T ss_dssp HHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SS----------------------------------
T ss_pred HHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCC----------------------------------
Confidence 54322112357899999999999999999876 5788888765410
Q ss_pred hhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEE
Q 017180 239 YNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVV 318 (376)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii 318 (376)
.. .. ......++ ++|++++
T Consensus 133 --~~---~~------------------------------------------------------~~~~~~~~--~~P~l~~ 151 (218)
T PF01738_consen 133 --PP---PP------------------------------------------------------PLEDAPKI--KAPVLIL 151 (218)
T ss_dssp --SG---GG------------------------------------------------------HHHHGGG----S-EEEE
T ss_pred --CC---Cc------------------------------------------------------chhhhccc--CCCEeec
Confidence 00 00 11233445 8999999
Q ss_pred EeCCCCCCCHHHHHHHh----cccCCceEEEeCCC-CCCCCCCh--------HHHHHHHHHHHHhh
Q 017180 319 STEGSPRRSKAEMEALK----GAKGVTKFVEVPGA-LLPQEEYP--------AMVAQELYQFLQQT 371 (376)
Q Consensus 319 ~G~~D~~~~~~~~~~~~----~~~~~~~~~~~~~~-H~~~~e~p--------e~~~~~i~~fl~~~ 371 (376)
+|++|+.++.+..+.+. +.....++++++++ |....... ++-.+.+.+||++.
T Consensus 152 ~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 152 FGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp EETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred CccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 99999999988655553 44578899999999 98655432 34566777888765
No 85
>PRK10162 acetyl esterase; Provisional
Probab=99.54 E-value=9.2e-13 Score=117.05 Aligned_cols=104 Identities=8% Similarity=-0.016 Sum_probs=72.8
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHH---HhCCCCCCC
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDL---INAPDSPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~---l~~l~~~~~ 165 (376)
.|.||++||.+.. ++...|..++..|++. .|+.|+++|+|...+..-| ...++..+.+..+ .+.++
T Consensus 81 ~p~vv~~HGGg~~~g~~~~~~~~~~~la~~---~g~~Vv~vdYrlape~~~p---~~~~D~~~a~~~l~~~~~~~~---- 150 (318)
T PRK10162 81 QATLFYLHGGGFILGNLDTHDRIMRLLASY---SGCTVIGIDYTLSPEARFP---QAIEEIVAVCCYFHQHAEDYG---- 150 (318)
T ss_pred CCEEEEEeCCcccCCCchhhhHHHHHHHHH---cCCEEEEecCCCCCCCCCC---CcHHHHHHHHHHHHHhHHHhC----
Confidence 5789999997632 4556788888888873 2799999999976543322 2344444443333 33343
Q ss_pred CCCCcEEEEecchHHHHHHHHHHhC------CCCcceEEEeccC
Q 017180 166 SSESDLVIFGGGHAATLTVRAAKKN------LVKPTAIAAVAPT 203 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~~~------p~~v~~lvl~~p~ 203 (376)
....+++|+|+|+||.+++.++.+. +.++.+++++.|.
T Consensus 151 ~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~ 194 (318)
T PRK10162 151 INMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGL 194 (318)
T ss_pred CChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCc
Confidence 1256899999999999999988742 3678999999874
No 86
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.54 E-value=4.8e-13 Score=127.77 Aligned_cols=123 Identities=15% Similarity=0.038 Sum_probs=88.5
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccch---Hh-HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVE---EW-RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADV 148 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~---~~-~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~ 148 (376)
||.+|++...-+...++.|+||++||++ .+.. .+ ......|.++ ||.|+++|+||+|.|+.....++ ..
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg--~~~~~~~~~~~~~~~~l~~~----Gy~vv~~D~RG~g~S~g~~~~~~-~~ 77 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYG--KDAGLRWGLDKTEPAWFVAQ----GYAVVIQDTRGRGASEGEFDLLG-SD 77 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCC--CchhhccccccccHHHHHhC----CcEEEEEeccccccCCCceEecC-cc
Confidence 4777875554332222368899999999 6542 12 2234566665 99999999999999985433333 45
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
.++|+.++++.+..+. ....++.++|+|+||.+++.+|..+|+.++++|..++.
T Consensus 78 ~~~D~~~~i~~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~ 131 (550)
T TIGR00976 78 EAADGYDLVDWIAKQP-WCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGV 131 (550)
T ss_pred cchHHHHHHHHHHhCC-CCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcc
Confidence 6677777777664221 12468999999999999999999999999999988764
No 87
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.53 E-value=6.7e-14 Score=95.94 Aligned_cols=78 Identities=14% Similarity=0.266 Sum_probs=66.6
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCCCHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEKF 152 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~~ 152 (376)
|.+|+|+.+.++++ ++.+|+++||++ .++..|..+++.|++. ||.|+++|+||||+|+.. ....+.+++.+|
T Consensus 1 G~~L~~~~w~p~~~-~k~~v~i~HG~~--eh~~ry~~~a~~L~~~----G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D 73 (79)
T PF12146_consen 1 GTKLFYRRWKPENP-PKAVVVIVHGFG--EHSGRYAHLAEFLAEQ----GYAVFAYDHRGHGRSEGKRGHIDSFDDYVDD 73 (79)
T ss_pred CcEEEEEEecCCCC-CCEEEEEeCCcH--HHHHHHHHHHHHHHhC----CCEEEEECCCcCCCCCCcccccCCHHHHHHH
Confidence 56788888877654 366888889999 9999999999999997 999999999999999943 345688999999
Q ss_pred HHHHHh
Q 017180 153 VVDLIN 158 (376)
Q Consensus 153 l~~~l~ 158 (376)
+..+++
T Consensus 74 ~~~~~~ 79 (79)
T PF12146_consen 74 LHQFIQ 79 (79)
T ss_pred HHHHhC
Confidence 998874
No 88
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.52 E-value=6.1e-13 Score=117.87 Aligned_cols=215 Identities=16% Similarity=0.190 Sum_probs=116.2
Q ss_pred CCcEEEecCCCCCccchHhH-HHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWR-LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~-~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.|+||++-|+- +....+. .+.+.|..+ |+.++++|.||.|.|..-....+.+.+-+.+.+.+.... .+..
T Consensus 190 ~P~VIv~gGlD--s~qeD~~~l~~~~l~~r----GiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p---~VD~ 260 (411)
T PF06500_consen 190 YPTVIVCGGLD--SLQEDLYRLFRDYLAPR----GIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRP---WVDH 260 (411)
T ss_dssp EEEEEEE--TT--S-GGGGHHHHHCCCHHC----T-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHST---TEEE
T ss_pred CCEEEEeCCcc--hhHHHHHHHHHHHHHhC----CCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCC---ccCh
Confidence 56667767777 6665544 444667776 999999999999999733232333455556666665553 2235
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHH
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKA 248 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (376)
.+|.++|.|+||.+|.++|..++.+++++|..+|. ...++.. + ..... .+..
T Consensus 261 ~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~----vh~~ft~-----------------~----~~~~~---~P~m 312 (411)
T PF06500_consen 261 TRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAP----VHHFFTD-----------------P----EWQQR---VPDM 312 (411)
T ss_dssp EEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES-------SCGGH------------------H----HHHTT---S-HH
T ss_pred hheEEEEeccchHHHHHHHHhcccceeeEeeeCch----Hhhhhcc-----------------H----HHHhc---CCHH
Confidence 68999999999999999999888999999999873 1211110 0 00000 0111
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHH--hcccCCCcEEEEEeCCCCCC
Q 017180 249 IQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLF--ADLEGKLPLLVVSTEGSPRR 326 (376)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~Pvlii~G~~D~~~ 326 (376)
....+....... ..+++.+...... ..+. ....+ .+. ++|+|.+.|++|+++
T Consensus 313 y~d~LA~rlG~~--~~~~~~l~~el~~---------------~SLk-------~qGlL~~rr~--~~plL~i~~~~D~v~ 366 (411)
T PF06500_consen 313 YLDVLASRLGMA--AVSDESLRGELNK---------------FSLK-------TQGLLSGRRC--PTPLLAINGEDDPVS 366 (411)
T ss_dssp HHHHHHHHCT-S--CE-HHHHHHHGGG---------------GSTT-------TTTTTTSS-B--SS-EEEEEETT-SSS
T ss_pred HHHHHHHHhCCc--cCCHHHHHHHHHh---------------cCcc-------hhccccCCCC--CcceEEeecCCCCCC
Confidence 111111111100 1111111110000 0000 00122 344 889999999999999
Q ss_pred CHHHHHHHhcccCCceEEEeCCC--CCCCCCChHHHHHHHHHHHHhh
Q 017180 327 SKAEMEALKGAKGVTKFVEVPGA--LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~--H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
|.+..+.+.....+.+...++.. |.-+ +.-...+.+||++.
T Consensus 367 P~eD~~lia~~s~~gk~~~~~~~~~~~gy----~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 367 PIEDSRLIAESSTDGKALRIPSKPLHMGY----PQALDEIYKWLEDK 409 (411)
T ss_dssp -HHHHHHHHHTBTT-EEEEE-SSSHHHHH----HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCceeecCCCccccch----HHHHHHHHHHHHHh
Confidence 99999988887777777777754 6544 24567788888765
No 89
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.50 E-value=1.2e-12 Score=111.31 Aligned_cols=98 Identities=13% Similarity=0.248 Sum_probs=81.6
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcc-eEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVN-WRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~-~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
++|+|+|+.+ ++...|..+++.|.. . +.|++++++|.+.... ...+++++++...+.|.... ..+
T Consensus 1 ~~lf~~p~~g--G~~~~y~~la~~l~~-----~~~~v~~i~~~~~~~~~~--~~~si~~la~~y~~~I~~~~-----~~g 66 (229)
T PF00975_consen 1 RPLFCFPPAG--GSASSYRPLARALPD-----DVIGVYGIEYPGRGDDEP--PPDSIEELASRYAEAIRARQ-----PEG 66 (229)
T ss_dssp -EEEEESSTT--CSGGGGHHHHHHHTT-----TEEEEEEECSTTSCTTSH--EESSHHHHHHHHHHHHHHHT-----SSS
T ss_pred CeEEEEcCCc--cCHHHHHHHHHhCCC-----CeEEEEEEecCCCCCCCC--CCCCHHHHHHHHHHHhhhhC-----CCC
Confidence 3699999999 999999999999998 5 9999999999983332 34789999998888777765 345
Q ss_pred cEEEEecchHHHHHHHHHH---hCCCCcceEEEecc
Q 017180 170 DLVIFGGGHAATLTVRAAK---KNLVKPTAIAAVAP 202 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~---~~p~~v~~lvl~~p 202 (376)
+++|+|||+||.+|..+|. ..-..+..|+++++
T Consensus 67 p~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~ 102 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDS 102 (229)
T ss_dssp SEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESC
T ss_pred CeeehccCccHHHHHHHHHHHHHhhhccCceEEecC
Confidence 9999999999999999998 34456889999985
No 90
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.50 E-value=1.3e-12 Score=120.33 Aligned_cols=104 Identities=10% Similarity=0.199 Sum_probs=82.4
Q ss_pred CCcEEEecCCCCCccchHh-----HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEW-----RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPV 164 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~-----~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~ 164 (376)
+.|||+++.+- ...+.+ +.++..|.++ ||+|+++|+++-+..+ ...+++++++.+.+.++.+...
T Consensus 215 ~~PLLIVPp~I--NK~YIlDL~P~~SlVr~lv~q----G~~VflIsW~nP~~~~---r~~~ldDYv~~i~~Ald~V~~~- 284 (560)
T TIGR01839 215 ARPLLVVPPQI--NKFYIFDLSPEKSFVQYCLKN----QLQVFIISWRNPDKAH---REWGLSTYVDALKEAVDAVRAI- 284 (560)
T ss_pred CCcEEEechhh--hhhheeecCCcchHHHHHHHc----CCeEEEEeCCCCChhh---cCCCHHHHHHHHHHHHHHHHHh-
Confidence 57899999988 666666 4788899887 9999999999977654 4578889888777766665211
Q ss_pred CCCCCcEEEEecchHHHHHHH----HHHhCCC-CcceEEEeccCC
Q 017180 165 SSSESDLVIFGGGHAATLTVR----AAKKNLV-KPTAIAAVAPTW 204 (376)
Q Consensus 165 ~~~~~~~~lvG~S~Gg~ia~~----~a~~~p~-~v~~lvl~~p~~ 204 (376)
...+++.++|+|+||.+++. +++++++ +|++++++....
T Consensus 285 -tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatpl 328 (560)
T TIGR01839 285 -TGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLL 328 (560)
T ss_pred -cCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeeccc
Confidence 02678999999999999997 7888886 799999886543
No 91
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.49 E-value=5.8e-13 Score=113.53 Aligned_cols=121 Identities=16% Similarity=0.248 Sum_probs=99.5
Q ss_pred cCCceeEEEEecccCCC---CCCCcEEEecCCCCCccchHhHHHHHHHHhh--hC-C--cceEEEEeCCCCCcCCCCCC-
Q 017180 71 KENSINIYYEKHERESP---DPSKNILMIPTISDVSTVEEWRLVAQDIVQR--VG-K--VNWRATIVDWPGLGYSDRPK- 141 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~---~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~--~~-~--~~~~Vi~~D~~G~G~S~~~~- 141 (376)
..+|++|||...-++.. +.-.||+++|||+ ++...|-.+++.|.+. .+ . --|.||++.+||||.|+.+.
T Consensus 130 eIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwP--Gsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk 207 (469)
T KOG2565|consen 130 EIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWP--GSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSK 207 (469)
T ss_pred hhcceeEEEEEecCCccccCCcccceEEecCCC--chHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCcc
Confidence 34599999977654422 2235899999999 9999999999999763 11 1 12899999999999999664
Q ss_pred CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEE
Q 017180 142 MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAA 199 (376)
Q Consensus 142 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl 199 (376)
...+....|..+..++=.++ -.++.|-|..||+.|+..+|..+|+.|.++=+
T Consensus 208 ~GFn~~a~ArvmrkLMlRLg------~nkffiqGgDwGSiI~snlasLyPenV~GlHl 259 (469)
T KOG2565|consen 208 TGFNAAATARVMRKLMLRLG------YNKFFIQGGDWGSIIGSNLASLYPENVLGLHL 259 (469)
T ss_pred CCccHHHHHHHHHHHHHHhC------cceeEeecCchHHHHHHHHHhhcchhhhHhhh
Confidence 57888899999999999998 78899999999999999999999999988644
No 92
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.48 E-value=2.1e-12 Score=108.46 Aligned_cols=179 Identities=17% Similarity=0.194 Sum_probs=102.3
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCC------CcC---CC------CCCC---CCCHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPG------LGY---SD------RPKM---DYNADVMEK 151 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G------~G~---S~------~~~~---~~~~~~~~~ 151 (376)
.+.|||+||+| ++...|..+...... .. +.+++.+.-|- .|. +- .+.. ...++..++
T Consensus 14 ~~lvi~LHG~G--~~~~~~~~~~~~~~~-~~--~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 14 KPLVILLHGYG--DSEDLFALLAELNLA-LP--NTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp SEEEEEE--TT--S-HHHHHHHHHHHTC-ST--TEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred ceEEEEECCCC--CCcchhHHHHhhccc-CC--ceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 67899999999 888777554442111 11 68888776542 232 11 0101 111222333
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
.+.++++..... ....+++++.|+|.||.+++.++.++|..+.++|.+++.. +.
T Consensus 89 ~l~~li~~~~~~-~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~----~~--------------------- 142 (216)
T PF02230_consen 89 RLDELIDEEVAY-GIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYL----PP--------------------- 142 (216)
T ss_dssp HHHHHHHHHHHT-T--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES-------TT---------------------
T ss_pred HHHHHHHHHHHc-CCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccc----cc---------------------
Confidence 444554432110 0246789999999999999999999999999999998731 00
Q ss_pred CchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccC
Q 017180 232 PGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEG 311 (376)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 311 (376)
.. . .. .......
T Consensus 143 --------~~--~--------~~-------------------------------------------------~~~~~~~- 154 (216)
T PF02230_consen 143 --------ES--E--------LE-------------------------------------------------DRPEALA- 154 (216)
T ss_dssp --------GC--C--------CH-------------------------------------------------CCHCCCC-
T ss_pred --------cc--c--------cc-------------------------------------------------ccccccC-
Confidence 00 0 00 0001110
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHH----hcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEAL----KGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~----~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
++|++++||++|+++|.+..+.. ++...+++++.++++ |-.. .+..+.+.+||.+.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 56999999999999998766654 344557899999977 9764 45667788999875
No 93
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.46 E-value=1.8e-12 Score=103.61 Aligned_cols=237 Identities=12% Similarity=0.072 Sum_probs=130.7
Q ss_pred cEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC---CCCCHHHHHH-HHHHHHhCCCCCCCCC
Q 017180 92 NILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK---MDYNADVMEK-FVVDLINAPDSPVSSS 167 (376)
Q Consensus 92 ~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~---~~~~~~~~~~-~l~~~l~~l~~~~~~~ 167 (376)
.|+.--+.+ .....|++++..+.+. ||.|+.+|+||.|.|+... ..+...+++. |+.+.++.++... .
T Consensus 32 ~~~va~a~G--v~~~fYRrfA~~a~~~----Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~--~ 103 (281)
T COG4757 32 RLVVAGATG--VGQYFYRRFAAAAAKA----GFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKAL--P 103 (281)
T ss_pred cEEecccCC--cchhHhHHHHHHhhcc----CceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhC--C
Confidence 355556666 6677888899888887 9999999999999998543 2355555554 4555454443111 3
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHH
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEK 247 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (376)
..+...||||+||.+.-.+.+. + ++....... ...+--+++... .-+............+ .
T Consensus 104 ~~P~y~vgHS~GGqa~gL~~~~-~-k~~a~~vfG-~gagwsg~m~~~--------~~l~~~~l~~lv~p~l--------t 164 (281)
T COG4757 104 GHPLYFVGHSFGGQALGLLGQH-P-KYAAFAVFG-SGAGWSGWMGLR--------ERLGAVLLWNLVGPPL--------T 164 (281)
T ss_pred CCceEEeeccccceeecccccC-c-ccceeeEec-cccccccchhhh--------hcccceeeccccccch--------h
Confidence 7889999999999877666553 4 333333222 211111111000 0000000000000000 0
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCC
Q 017180 248 AIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRS 327 (376)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~ 327 (376)
.....+.+......+..+.............+... ..+-....+.+.++++ ++|++.+...+|+.+|
T Consensus 165 ~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~-----------fddp~~~~~~q~yaaV--rtPi~~~~~~DD~w~P 231 (281)
T COG4757 165 FWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYY-----------FDDPAMRNYRQVYAAV--RTPITFSRALDDPWAP 231 (281)
T ss_pred hccccCcHhhcCCCccCcchHHHHHHHHhcCcccc-----------ccChhHhHHHHHHHHh--cCceeeeccCCCCcCC
Confidence 00001111222212223222222222222211110 0000122256778888 9999999999999999
Q ss_pred HHHHHHHhcccCCceEEE--eC-----CCCCCCCCCh-HHHHHHHHHHH
Q 017180 328 KAEMEALKGAKGVTKFVE--VP-----GALLPQEEYP-AMVAQELYQFL 368 (376)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~--~~-----~~H~~~~e~p-e~~~~~i~~fl 368 (376)
....+.+.+..+|+.+.. ++ -||+-..-+| |.+.+.+++|+
T Consensus 232 ~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 232 PASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 999999987776655433 32 1399888887 88888888775
No 94
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.42 E-value=4.9e-11 Score=105.01 Aligned_cols=213 Identities=14% Similarity=0.066 Sum_probs=111.4
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcC-CCCC------C----CCCCH---------HHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGY-SDRP------K----MDYNA---------DVM 149 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~-S~~~------~----~~~~~---------~~~ 149 (376)
-|.||.+||.+ .....|...+..-.. ||-|+++|.||+|. |... . ..... ..+
T Consensus 83 ~Pavv~~hGyg--~~~~~~~~~~~~a~~-----G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~ 155 (320)
T PF05448_consen 83 LPAVVQFHGYG--GRSGDPFDLLPWAAA-----GYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRV 155 (320)
T ss_dssp EEEEEEE--TT----GGGHHHHHHHHHT-----T-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHH
T ss_pred cCEEEEecCCC--CCCCCcccccccccC-----CeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHH
Confidence 57889999999 877777665554444 99999999999993 3211 0 01111 122
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhh
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTL 229 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (376)
..|....++.+.....+..+++.+.|.|.||.+++.+|+-.+ +|++++...|.... ....+....
T Consensus 156 ~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d--------------~~~~~~~~~ 220 (320)
T PF05448_consen 156 YLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCD--------------FRRALELRA 220 (320)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSS--------------HHHHHHHT-
T ss_pred HHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccc--------------hhhhhhcCC
Confidence 334433333322222234678999999999999999999765 69999999885311 000000000
Q ss_pred -ccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 230 -RAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 230 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
..+. ..+..++... ....+..+...+.+ .+.+ .....++
T Consensus 221 ~~~~y-------------~~~~~~~~~~------d~~~~~~~~v~~~L--------------~Y~D-------~~nfA~r 260 (320)
T PF05448_consen 221 DEGPY-------------PEIRRYFRWR------DPHHEREPEVFETL--------------SYFD-------AVNFARR 260 (320)
T ss_dssp -STTT-------------HHHHHHHHHH------SCTHCHHHHHHHHH--------------HTT--------HHHHGGG
T ss_pred ccccH-------------HHHHHHHhcc------CCCcccHHHHHHHH--------------hhhh-------HHHHHHH
Confidence 0000 0111111100 00000000000000 1111 4556677
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHHhcccC-CceEEEeCCC-CCCCCCChHHH-HHHHHHHHHh
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEALKGAKG-VTKFVEVPGA-LLPQEEYPAMV-AQELYQFLQQ 370 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~-H~~~~e~pe~~-~~~i~~fl~~ 370 (376)
| +||+++-.|-.|.++|+...-.....++ .+++++++.. |-.. .++ .+...+||.+
T Consensus 261 i--~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~----~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 261 I--KCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYG----PEFQEDKQLNFLKE 319 (320)
T ss_dssp ----SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTT----HHHHHHHHHHHHHH
T ss_pred c--CCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCch----hhHHHHHHHHHHhc
Confidence 8 9999999999999999988887765544 6889999988 7543 334 6778888875
No 95
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.42 E-value=2.5e-11 Score=97.92 Aligned_cols=87 Identities=15% Similarity=0.167 Sum_probs=64.5
Q ss_pred EEEecCCCCCccchH--hHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCc
Q 017180 93 ILMIPTISDVSTVEE--WRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESD 170 (376)
Q Consensus 93 vvllHG~~~~~~~~~--~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 170 (376)
|++|||+. ++... ...+.+.+.+... ..+++++|++ ...+...+.+.+++++.. .+.
T Consensus 2 ilYlHGF~--Ssp~S~Ka~~l~~~~~~~~~--~~~~~~p~l~-----------~~p~~a~~~l~~~i~~~~------~~~ 60 (187)
T PF05728_consen 2 ILYLHGFN--SSPQSFKAQALKQYFAEHGP--DIQYPCPDLP-----------PFPEEAIAQLEQLIEELK------PEN 60 (187)
T ss_pred eEEecCCC--CCCCCHHHHHHHHHHHHhCC--CceEECCCCC-----------cCHHHHHHHHHHHHHhCC------CCC
Confidence 89999999 65544 3445566666411 3567777776 345667788888998886 555
Q ss_pred EEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 171 LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
+.|||.||||..|..+|.+++. .+ ||++|.
T Consensus 61 ~~liGSSlGG~~A~~La~~~~~--~a-vLiNPa 90 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAERYGL--PA-VLINPA 90 (187)
T ss_pred eEEEEEChHHHHHHHHHHHhCC--CE-EEEcCC
Confidence 9999999999999999998753 33 999995
No 96
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.41 E-value=9.4e-12 Score=96.90 Aligned_cols=171 Identities=15% Similarity=0.158 Sum_probs=111.3
Q ss_pred CCcEEEecCCC---CCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHHHHHHHHHhCCCCCC
Q 017180 90 SKNILMIPTIS---DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVMEKFVVDLINAPDSPV 164 (376)
Q Consensus 90 ~~~vvllHG~~---~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~~~l~~~l~~l~~~~ 164 (376)
.|..|.+|--+ ++.+...-..++..|.++ ||.++.||+||-|+|...- ..-..++....+ +++++..
T Consensus 28 ~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~----G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aal-dW~~~~h--- 99 (210)
T COG2945 28 APIALICHPHPLFGGTMNNKVVQTLARALVKR----GFATLRFNFRGVGRSQGEFDNGIGELEDAAAAL-DWLQARH--- 99 (210)
T ss_pred CceEEecCCCccccCccCCHHHHHHHHHHHhC----CceEEeecccccccccCcccCCcchHHHHHHHH-HHHHhhC---
Confidence 45556666533 224444555667777776 9999999999999998542 122233333333 3333332
Q ss_pred CCCCCc-EEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhh
Q 017180 165 SSSESD-LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLV 243 (376)
Q Consensus 165 ~~~~~~-~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (376)
...+ ..+.|+|+|+.|++.+|.+.|+. ...+.+.|..
T Consensus 100 --p~s~~~~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~--------------------------------------- 137 (210)
T COG2945 100 --PDSASCWLAGFSFGAYIAMQLAMRRPEI-LVFISILPPI--------------------------------------- 137 (210)
T ss_pred --CCchhhhhcccchHHHHHHHHHHhcccc-cceeeccCCC---------------------------------------
Confidence 2333 36789999999999999997753 3344443310
Q ss_pred ccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCC
Q 017180 244 SNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGS 323 (376)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D 323 (376)
. ... + ..+... .+|.++|+|+.|
T Consensus 138 -~--~~d-f---------------------------------------------------s~l~P~--P~~~lvi~g~~D 160 (210)
T COG2945 138 -N--AYD-F---------------------------------------------------SFLAPC--PSPGLVIQGDAD 160 (210)
T ss_pred -C--chh-h---------------------------------------------------hhccCC--CCCceeEecChh
Confidence 0 000 0 001111 779999999999
Q ss_pred CCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 324 PRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
.+++.+..-++.+. ...++++++++ ||.+-.-. .+.+.|.+||.
T Consensus 161 dvv~l~~~l~~~~~-~~~~~i~i~~a~HFF~gKl~-~l~~~i~~~l~ 205 (210)
T COG2945 161 DVVDLVAVLKWQES-IKITVITIPGADHFFHGKLI-ELRDTIADFLE 205 (210)
T ss_pred hhhcHHHHHHhhcC-CCCceEEecCCCceecccHH-HHHHHHHHHhh
Confidence 99888777777665 45678899999 99776654 58999999995
No 97
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.39 E-value=3.1e-12 Score=122.81 Aligned_cols=111 Identities=14% Similarity=0.024 Sum_probs=82.5
Q ss_pred CceeEEEEecccCC-----C-CCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC------
Q 017180 73 NSINIYYEKHERES-----P-DPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP------ 140 (376)
Q Consensus 73 ~g~~l~y~~~g~~~-----~-~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~------ 140 (376)
++.++.|...|.+. + ...|+|||+||++ ++...|..++..|.+. ||+|+++|+||||+|...
T Consensus 426 ~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~--g~~~~~~~lA~~La~~----Gy~VIaiDlpGHG~S~~~~~~~~~ 499 (792)
T TIGR03502 426 NGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGIT--GAKENALAFAGTLAAA----GVATIAIDHPLHGARSFDANASGV 499 (792)
T ss_pred CcchhhhhhcccccccccCCCCCCcEEEEeCCCC--CCHHHHHHHHHHHHhC----CcEEEEeCCCCCCccccccccccc
Confidence 35555665554431 1 1135899999999 9999999999999875 999999999999999421
Q ss_pred ----CC-------------CCCHHHHHHHHHHHHhCCC------CC----CCCCCCcEEEEecchHHHHHHHHHHh
Q 017180 141 ----KM-------------DYNADVMEKFVVDLINAPD------SP----VSSSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 141 ----~~-------------~~~~~~~~~~l~~~l~~l~------~~----~~~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
.. +.++.+.+.|+..+...+. .+ ......+++++||||||.+++.++..
T Consensus 500 ~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 500 NATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 11 1367888888888777664 11 01235689999999999999999884
No 98
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.38 E-value=9.9e-12 Score=99.17 Aligned_cols=154 Identities=13% Similarity=0.191 Sum_probs=97.4
Q ss_pred EEEecCCCCCccchHhHHHH-HHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcE
Q 017180 93 ILMIPTISDVSTVEEWRLVA-QDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDL 171 (376)
Q Consensus 93 vvllHG~~~~~~~~~~~~~~-~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~ 171 (376)
|+++||++++.. .+|.... ..|.+ .++|-.+|+ +. .+.++|.+.+.+.+... .+++
T Consensus 1 v~IvhG~~~s~~-~HW~~wl~~~l~~-----~~~V~~~~~------~~----P~~~~W~~~l~~~i~~~-------~~~~ 57 (171)
T PF06821_consen 1 VLIVHGYGGSPP-DHWQPWLERQLEN-----SVRVEQPDW------DN----PDLDEWVQALDQAIDAI-------DEPT 57 (171)
T ss_dssp EEEE--TTSSTT-TSTHHHHHHHHTT-----SEEEEEC--------TS------HHHHHHHHHHCCHC--------TTTE
T ss_pred CEEeCCCCCCCc-cHHHHHHHHhCCC-----CeEEecccc------CC----CCHHHHHHHHHHHHhhc-------CCCe
Confidence 688999994433 5665543 33333 488888777 22 35678888888877775 5679
Q ss_pred EEEecchHHHHHHHHH-HhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHH
Q 017180 172 VIFGGGHAATLTVRAA-KKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQ 250 (376)
Q Consensus 172 ~lvG~S~Gg~ia~~~a-~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (376)
++||||+|+..+++++ .....+|.+++|++|.... ... .....
T Consensus 58 ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~---------------------------------~~~-~~~~~-- 101 (171)
T PF06821_consen 58 ILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPD---------------------------------DPE-PFPPE-- 101 (171)
T ss_dssp EEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCG---------------------------------CHH-CCTCG--
T ss_pred EEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcc---------------------------------ccc-chhhh--
Confidence 9999999999999999 7788899999999984200 000 00000
Q ss_pred HHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHH
Q 017180 251 SQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAE 330 (376)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~ 330 (376)
. ..+. . . -...+ .+|.++|.+++|+++|.+.
T Consensus 102 ---~-~~f~----------------------------------~-------~--p~~~l--~~~~~viaS~nDp~vp~~~ 132 (171)
T PF06821_consen 102 ---L-DGFT----------------------------------P-------L--PRDPL--PFPSIVIASDNDPYVPFER 132 (171)
T ss_dssp ---G-CCCT----------------------------------T-------S--HCCHH--HCCEEEEEETTBSSS-HHH
T ss_pred ---c-cccc----------------------------------c-------C--ccccc--CCCeEEEEcCCCCccCHHH
Confidence 0 0000 0 0 00112 5688999999999999999
Q ss_pred HHHHhcccCCceEEEeCCC-CCCCCC
Q 017180 331 MEALKGAKGVTKFVEVPGA-LLPQEE 355 (376)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~-H~~~~e 355 (376)
.+++++.. +++++.++++ |+.-.+
T Consensus 133 a~~~A~~l-~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 133 AQRLAQRL-GAELIILGGGGHFNAAS 157 (171)
T ss_dssp HHHHHHHH-T-EEEEETS-TTSSGGG
T ss_pred HHHHHHHc-CCCeEECCCCCCccccc
Confidence 99998877 6889999998 996554
No 99
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.33 E-value=4e-11 Score=102.10 Aligned_cols=104 Identities=16% Similarity=0.162 Sum_probs=62.9
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCC----CCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCC
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWP----GLGYSDRPKMDYNADVMEKFVVDLINAPDSPV 164 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~----G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~ 164 (376)
...||||.|++.. .+......+++.|.+. +|.|+-+-++ |+|- .+++.-++||.++++.+....
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~----~wsl~q~~LsSSy~G~G~-------~SL~~D~~eI~~~v~ylr~~~ 101 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEET----GWSLFQVQLSSSYSGWGT-------SSLDRDVEEIAQLVEYLRSEK 101 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-T----T-EEEEE--GGGBTTS-S---------HHHHHHHHHHHHHHHHHHS
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccC----CeEEEEEEecCccCCcCc-------chhhhHHHHHHHHHHHHHHhh
Confidence 4579999999843 2334455667777554 8999998765 4554 356667777777776553110
Q ss_pred C--CCCCcEEEEecchHHHHHHHHHHhC-----CCCcceEEEeccCC
Q 017180 165 S--SSESDLVIFGGGHAATLTVRAAKKN-----LVKPTAIAAVAPTW 204 (376)
Q Consensus 165 ~--~~~~~~~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~~p~~ 204 (376)
. ...++|+|+|||.|+.-+++|.... ...|++.||-+|..
T Consensus 102 ~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVS 148 (303)
T PF08538_consen 102 GGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVS 148 (303)
T ss_dssp ------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE--
T ss_pred ccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCC
Confidence 0 0256899999999999999998843 26799999999854
No 100
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.33 E-value=4.1e-10 Score=91.18 Aligned_cols=225 Identities=11% Similarity=0.121 Sum_probs=112.2
Q ss_pred CceeEEEEecccCCC--CCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC-cCCCCCCCCCCHHHH
Q 017180 73 NSINIYYEKHERESP--DPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL-GYSDRPKMDYNADVM 149 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~--~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~-G~S~~~~~~~~~~~~ 149 (376)
+|.+|+..+.-+.+. +..++||+..|++ ....+|..++.+|+.. ||+||.+|--.| |.|+..-..++++..
T Consensus 11 ~~~~I~vwet~P~~~~~~~~~tiliA~Gf~--rrmdh~agLA~YL~~N----GFhViRyDsl~HvGlSsG~I~eftms~g 84 (294)
T PF02273_consen 11 DGRQIRVWETRPKNNEPKRNNTILIAPGFA--RRMDHFAGLAEYLSAN----GFHVIRYDSLNHVGLSSGDINEFTMSIG 84 (294)
T ss_dssp TTEEEEEEEE---TTS---S-EEEEE-TT---GGGGGGHHHHHHHHTT----T--EEEE---B-------------HHHH
T ss_pred CCCEEEEeccCCCCCCcccCCeEEEecchh--HHHHHHHHHHHHHhhC----CeEEEeccccccccCCCCChhhcchHHh
Confidence 466777666554433 2247889999999 9999999999999997 999999997776 999977788999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhh
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTL 229 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (376)
.+++..+++.+..+ ...++-|+.-|+.|.+|...|.+- .+.-+|...+.. ..+..+.+.+
T Consensus 85 ~~sL~~V~dwl~~~---g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVV---------------nlr~TLe~al 144 (294)
T PF02273_consen 85 KASLLTVIDWLATR---GIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVV---------------NLRDTLEKAL 144 (294)
T ss_dssp HHHHHHHHHHHHHT---T---EEEEEETTHHHHHHHHTTTS----SEEEEES--S----------------HHHHHHHHH
T ss_pred HHHHHHHHHHHHhc---CCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeee---------------eHHHHHHHHh
Confidence 99988776665421 267799999999999999999853 466777665411 0111111111
Q ss_pred ccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChH-HHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 230 RAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPG-IVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
..-.++..... +....-.....+..+ ++..+ +....+ +.+...+.++.
T Consensus 145 ~~Dyl~~~i~~------------lp~dldfeGh~l~~~vFv~dc----------------~e~~w~---~l~ST~~~~k~ 193 (294)
T PF02273_consen 145 GYDYLQLPIEQ------------LPEDLDFEGHNLGAEVFVTDC----------------FEHGWD---DLDSTINDMKR 193 (294)
T ss_dssp SS-GGGS-GGG--------------SEEEETTEEEEHHHHHHHH----------------HHTT-S---SHHHHHHHHTT
T ss_pred ccchhhcchhh------------CCCcccccccccchHHHHHHH----------------HHcCCc---cchhHHHHHhh
Confidence 11111100000 000000000000000 00111 111111 33335566778
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHHhc--ccCCceEEEeCCC-CCCCCCCh
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEALKG--AKGVTKFVEVPGA-LLPQEEYP 357 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~~~--~~~~~~~~~~~~~-H~~~~e~p 357 (376)
+ .+|++.+++++|.++.......+.. ..+.++++.++|+ |-+. |+|
T Consensus 194 l--~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~-enl 242 (294)
T PF02273_consen 194 L--SIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG-ENL 242 (294)
T ss_dssp ----S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT-SSH
T ss_pred C--CCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhh-hCh
Confidence 8 9999999999999999888887765 3456889999999 9865 344
No 101
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.33 E-value=1.5e-10 Score=103.88 Aligned_cols=100 Identities=10% Similarity=0.214 Sum_probs=78.8
Q ss_pred CcEEEecCCCCCccchHh-HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 91 KNILMIPTISDVSTVEEW-RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~-~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
|+||++.-+. +..... +.+++.|.+ |+.|+..|+.--+..+.....++++++++-+.+++++++ .+
T Consensus 103 ~pvLiV~Pl~--g~~~~L~RS~V~~Ll~-----g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G------~~ 169 (406)
T TIGR01849 103 PAVLIVAPMS--GHYATLLRSTVEALLP-----DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLG------PD 169 (406)
T ss_pred CcEEEEcCCc--hHHHHHHHHHHHHHhC-----CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhC------CC
Confidence 7899998877 544433 456666666 999999999988765444567899999999999999986 44
Q ss_pred cEEEEecchHHHHHHHHHHh-----CCCCcceEEEeccCC
Q 017180 170 DLVIFGGGHAATLTVRAAKK-----NLVKPTAIAAVAPTW 204 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~-----~p~~v~~lvl~~p~~ 204 (376)
++++|+++||..++.+++. .|.++++++++.+..
T Consensus 170 -v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PI 208 (406)
T TIGR01849 170 -IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPI 208 (406)
T ss_pred -CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCc
Confidence 9999999999998776663 367899999987644
No 102
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.30 E-value=5.1e-10 Score=94.48 Aligned_cols=181 Identities=14% Similarity=0.107 Sum_probs=128.4
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC-cCCC-CCC------C----CCCHHHHHHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL-GYSD-RPK------M----DYNADVMEKFVVDLI 157 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~-G~S~-~~~------~----~~~~~~~~~~l~~~l 157 (376)
.|.||++|++. +-....+.+...|++. ||-|+++|+-+. |.+. ... . ..+..+...|+.+.+
T Consensus 27 ~P~VIv~hei~--Gl~~~i~~~a~rlA~~----Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~ 100 (236)
T COG0412 27 FPGVIVLHEIF--GLNPHIRDVARRLAKA----GYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAAL 100 (236)
T ss_pred CCEEEEEeccc--CCchHHHHHHHHHHhC----CcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHH
Confidence 37899999999 7778999999999997 999999998763 4333 110 0 122356667777777
Q ss_pred hCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhH
Q 017180 158 NAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWM 237 (376)
Q Consensus 158 ~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (376)
+.+..+.....+++.++|+||||.+++.++.+.| .+++.+..-|....
T Consensus 101 ~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~------------------------------- 148 (236)
T COG0412 101 DYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIA------------------------------- 148 (236)
T ss_pred HHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCC-------------------------------
Confidence 7664222234678999999999999999999887 67888776552100
Q ss_pred HhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEE
Q 017180 238 MYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLV 317 (376)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvli 317 (376)
.. .....++ ++|+|+
T Consensus 149 --~~-------------------------------------------------------------~~~~~~~--~~pvl~ 163 (236)
T COG0412 149 --DD-------------------------------------------------------------TADAPKI--KVPVLL 163 (236)
T ss_pred --Cc-------------------------------------------------------------ccccccc--cCcEEE
Confidence 00 0001233 899999
Q ss_pred EEeCCCCCCCHHHHHHHhcc----cCCceEEEeCCC-CCCCCCC-----------hHHHHHHHHHHHHhhcC
Q 017180 318 VSTEGSPRRSKAEMEALKGA----KGVTKFVEVPGA-LLPQEEY-----------PAMVAQELYQFLQQTFE 373 (376)
Q Consensus 318 i~G~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~-H~~~~e~-----------pe~~~~~i~~fl~~~~~ 373 (376)
++|+.|..++....+.+.+. ...+++.+++++ |..+.+. .+.-.+.+.+|+++.+.
T Consensus 164 ~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 164 HLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred EecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 99999999998877766533 236788999999 9876442 23457788889888764
No 103
>COG0400 Predicted esterase [General function prediction only]
Probab=99.29 E-value=4.8e-11 Score=97.45 Aligned_cols=171 Identities=13% Similarity=0.103 Sum_probs=110.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCC--CCcCC----CCCCCCCCHHH-------HHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWP--GLGYS----DRPKMDYNADV-------MEKFVVDL 156 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~--G~G~S----~~~~~~~~~~~-------~~~~l~~~ 156 (376)
.|.||++||+| ++...+-+....+.. ++.++.+-=+ -.|.- ......++.++ +++.+...
T Consensus 18 ~~~iilLHG~G--gde~~~~~~~~~~~P-----~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~ 90 (207)
T COG0400 18 APLLILLHGLG--GDELDLVPLPELILP-----NATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEEL 90 (207)
T ss_pred CcEEEEEecCC--CChhhhhhhhhhcCC-----CCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHH
Confidence 56799999999 888888775555554 5666654211 01100 01112233333 33334444
Q ss_pred HhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhh
Q 017180 157 INAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGW 236 (376)
Q Consensus 157 l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (376)
.++.+ ....+++++|+|-|+.+++.+..++|..++++|+.+|...
T Consensus 91 ~~~~g----i~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~------------------------------- 135 (207)
T COG0400 91 AEEYG----IDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLP------------------------------- 135 (207)
T ss_pred HHHhC----CChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCC-------------------------------
Confidence 44444 3457899999999999999999999999999999987310
Q ss_pred HHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEE
Q 017180 237 MMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLL 316 (376)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvl 316 (376)
. . .. . ...++ ..|++
T Consensus 136 -----~-~-~~------~------------------------------------------------~~~~~----~~pil 150 (207)
T COG0400 136 -----L-E-PE------L------------------------------------------------LPDLA----GTPIL 150 (207)
T ss_pred -----C-C-Cc------c------------------------------------------------ccccC----CCeEE
Confidence 0 0 00 0 00011 67999
Q ss_pred EEEeCCCCCCCHHHHHHHhc----ccCCceEEEeCCCCCCCCCChHHHHHHHHHHHHhh
Q 017180 317 VVSTEGSPRRSKAEMEALKG----AKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 317 ii~G~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
++||+.|+++|.....++.+ ..-+++++.+++||-...| -.+.+.+|+.+.
T Consensus 151 l~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i~~e----~~~~~~~wl~~~ 205 (207)
T COG0400 151 LSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHEIPPE----ELEAARSWLANT 205 (207)
T ss_pred EeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcCCHH----HHHHHHHHHHhc
Confidence 99999999999887777653 3457888899866876543 445566687764
No 104
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.29 E-value=5.3e-11 Score=97.65 Aligned_cols=215 Identities=20% Similarity=0.238 Sum_probs=127.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC----CC-----------------CCCCHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR----PK-----------------MDYNADV 148 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~----~~-----------------~~~~~~~ 148 (376)
-|.||-.||++ +....|......-.. ||.|+.+|-||.|.|+. +. ..|-...
T Consensus 83 ~P~vV~fhGY~--g~~g~~~~~l~wa~~-----Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~ 155 (321)
T COG3458 83 LPAVVQFHGYG--GRGGEWHDMLHWAVA-----GYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRG 155 (321)
T ss_pred cceEEEEeecc--CCCCCcccccccccc-----ceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEee
Confidence 67888889999 888888776655555 99999999999998832 11 1111222
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
...|+..+++.+-.-..+..+++.+.|.|.||.+++.++.-.| ++++++.+-|.... .+ +++...
T Consensus 156 v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~d-f~-------------r~i~~~ 220 (321)
T COG3458 156 VFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSD-FP-------------RAIELA 220 (321)
T ss_pred ehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccccccccc-ch-------------hheeec
Confidence 3334444444433222345788999999999999999988655 78999988875311 00 011000
Q ss_pred hccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 229 LRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
...+ -..+..++... .+.. +..++.+ ++ .+ +.....+
T Consensus 221 ~~~~-------------ydei~~y~k~h--------~~~e-~~v~~TL----------~y----fD-------~~n~A~R 257 (321)
T COG3458 221 TEGP-------------YDEIQTYFKRH--------DPKE-AEVFETL----------SY----FD-------IVNLAAR 257 (321)
T ss_pred ccCc-------------HHHHHHHHHhc--------CchH-HHHHHHH----------hh----hh-------hhhHHHh
Confidence 0000 11111111110 0000 0000000 00 11 4445566
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHHhcccC-CceEEEeCCCCCCCCCChHHHHHHHHHHHHhhcC
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEALKGAKG-VTKFVEVPGALLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
+ ++|+|+..|--|+++|+...-.+.++.+ ..++.+++.- .|++-|.-..+.+..|++....
T Consensus 258 i--K~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~--aHe~~p~~~~~~~~~~l~~l~~ 319 (321)
T COG3458 258 I--KVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYF--AHEGGPGFQSRQQVHFLKILFG 319 (321)
T ss_pred h--ccceEEeecccCCCCCChhhHHHhhcccCCceEEEeecc--ccccCcchhHHHHHHHHHhhcc
Confidence 7 9999999999999999887776665554 4556666653 2455566566668888887654
No 105
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.29 E-value=3.4e-11 Score=127.41 Aligned_cols=99 Identities=8% Similarity=0.071 Sum_probs=86.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+++++|+||++ ++...|..+...|.. +++|+++|+||+|.+. ...++++++++++.+.++.+. ...
T Consensus 1068 ~~~l~~lh~~~--g~~~~~~~l~~~l~~-----~~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~-----~~~ 1133 (1296)
T PRK10252 1068 GPTLFCFHPAS--GFAWQFSVLSRYLDP-----QWSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQ-----PHG 1133 (1296)
T ss_pred CCCeEEecCCC--CchHHHHHHHHhcCC-----CCcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhC-----CCC
Confidence 57899999999 999999999999987 7999999999998663 345899999999999998865 356
Q ss_pred cEEEEecchHHHHHHHHHHh---CCCCcceEEEecc
Q 017180 170 DLVIFGGGHAATLTVRAAKK---NLVKPTAIAAVAP 202 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~---~p~~v~~lvl~~p 202 (376)
+++++||||||.+|..+|.+ .++++..++++++
T Consensus 1134 p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1134 PYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred CEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 89999999999999999984 6788999999876
No 106
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.24 E-value=1.1e-09 Score=82.55 Aligned_cols=180 Identities=13% Similarity=0.173 Sum_probs=124.3
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC-----cCCCCCCC-CCCHHHHHHHHHHHHhCCCCCC
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL-----GYSDRPKM-DYNADVMEKFVVDLINAPDSPV 164 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~-----G~S~~~~~-~~~~~~~~~~l~~~l~~l~~~~ 164 (376)
-+|||-||.++...+.....++..|+.+ |+.|..|+++-. |.-.+|+. ..--..+...+.++...+.
T Consensus 15 ~tilLaHGAGasmdSt~m~~~a~~la~~----G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~--- 87 (213)
T COG3571 15 VTILLAHGAGASMDSTSMTAVAAALARR----GWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLA--- 87 (213)
T ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHhC----ceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhccc---
Confidence 3677889999667777888999999987 999999998743 32222322 2233467777788888775
Q ss_pred CCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhc
Q 017180 165 SSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVS 244 (376)
Q Consensus 165 ~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (376)
..+.++=|+||||.++..+|......|++|++++=.+ ..+ .
T Consensus 88 ---~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPf-------------------------hpp-----------G 128 (213)
T COG3571 88 ---EGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPF-------------------------HPP-----------G 128 (213)
T ss_pred ---CCceeeccccccchHHHHHHHhhcCCcceEEEecCcc-------------------------CCC-----------C
Confidence 7799999999999999999997666688988875210 000 0
Q ss_pred cHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCC
Q 017180 245 NEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSP 324 (376)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~ 324 (376)
.++.++ .+.+..| +.|+||.+|+.|+
T Consensus 129 KPe~~R----------------------------------------------------t~HL~gl--~tPtli~qGtrD~ 154 (213)
T COG3571 129 KPEQLR----------------------------------------------------TEHLTGL--KTPTLITQGTRDE 154 (213)
T ss_pred Ccccch----------------------------------------------------hhhccCC--CCCeEEeeccccc
Confidence 011111 2245556 8999999999999
Q ss_pred CCCHHHHHHHhcccCCceEEEeCCC-CCCCC----------CChHHHHHHHHHHHHhh
Q 017180 325 RRSKAEMEALKGAKGVTKFVEVPGA-LLPQE----------EYPAMVAQELYQFLQQT 371 (376)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~----------e~pe~~~~~i~~fl~~~ 371 (376)
+-..+....+ ...+..++++++++ |-+-- ++-...++.|..|+.++
T Consensus 155 fGtr~~Va~y-~ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~l 211 (213)
T COG3571 155 FGTRDEVAGY-ALSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARRL 211 (213)
T ss_pred ccCHHHHHhh-hcCCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhhc
Confidence 8876655332 23456899999999 96432 22345577777787664
No 107
>PRK10115 protease 2; Provisional
Probab=99.22 E-value=2.1e-09 Score=104.72 Aligned_cols=125 Identities=14% Similarity=0.049 Sum_probs=89.1
Q ss_pred cCCceeEEE-EecccC--CCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC--------
Q 017180 71 KENSINIYY-EKHERE--SPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR-------- 139 (376)
Q Consensus 71 ~~~g~~l~y-~~~g~~--~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~-------- 139 (376)
..||.+|.+ ....+. ..++.|.||++||..+......|......|.++ ||-|+.++.||-|+=.+
T Consensus 423 s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~r----G~~v~~~n~RGs~g~G~~w~~~g~~ 498 (686)
T PRK10115 423 ARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDR----GFVYAIVHVRGGGELGQQWYEDGKF 498 (686)
T ss_pred CCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHC----CcEEEEEEcCCCCccCHHHHHhhhh
Confidence 456777765 222111 112268889999977444444566666777776 99999999999765431
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 140 PKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 140 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
.....+++++.+.+..++++- .....++.+.|.|.||.++..++.++|++++++|...|.
T Consensus 499 ~~k~~~~~D~~a~~~~Lv~~g----~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~ 558 (686)
T PRK10115 499 LKKKNTFNDYLDACDALLKLG----YGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPF 558 (686)
T ss_pred hcCCCcHHHHHHHHHHHHHcC----CCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCc
Confidence 113356777777777776653 234678999999999999999999999999999998884
No 108
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.18 E-value=1.8e-09 Score=93.99 Aligned_cols=124 Identities=14% Similarity=0.054 Sum_probs=76.3
Q ss_pred CceeEEEEeccc--CCCCCCCcEEEecCCCCCccc-hHhHHH---------HHHHHhhhCCcceEEEEeCCCCCcCCCCC
Q 017180 73 NSINIYYEKHER--ESPDPSKNILMIPTISDVSTV-EEWRLV---------AQDIVQRVGKVNWRATIVDWPGLGYSDRP 140 (376)
Q Consensus 73 ~g~~l~y~~~g~--~~~~~~~~vvllHG~~~~~~~-~~~~~~---------~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~ 140 (376)
||++|+....-+ ...++-|+||..|+++ ... ...... ...+.++ ||-|+..|.||.|.|+..
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~--~~~~~~~~~~~~~~~~~~~~~~~~~~----GY~vV~~D~RG~g~S~G~ 74 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYG--KGDQTASDLAGANPGPPSARRPFAER----GYAVVVQDVRGTGGSEGE 74 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESST--CTC-HHHHHHTTCHHSHGGGHHHHHT----T-EEEEEE-TTSTTS-S-
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcC--CCCCcccchhhhhcccchhHHHHHhC----CCEEEEECCcccccCCCc
Confidence 466766554433 3333357778889998 543 111111 1127776 999999999999999844
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 141 KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 141 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
.... ...-++|..++|+-+..+ .....+|-++|.|.+|..++.+|...|..+++++...+..
T Consensus 75 ~~~~-~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~ 136 (272)
T PF02129_consen 75 FDPM-SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWS 136 (272)
T ss_dssp B-TT-SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-S
T ss_pred cccC-ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCC
Confidence 2222 333345555554444211 1245689999999999999999998888999999887643
No 109
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.16 E-value=3e-09 Score=104.39 Aligned_cols=88 Identities=15% Similarity=0.067 Sum_probs=63.3
Q ss_pred HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCC--------------CCCCCCcEEEEec
Q 017180 111 VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSP--------------VSSSESDLVIFGG 176 (376)
Q Consensus 111 ~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~--------------~~~~~~~~~lvG~ 176 (376)
..+.+.++ ||.|+..|.||.|.|+.....+..+ -.+|..++|+.+..+ ......+|.++|.
T Consensus 271 ~~~~~~~r----GYaVV~~D~RGtg~SeG~~~~~~~~-E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~ 345 (767)
T PRK05371 271 LNDYFLPR----GFAVVYVSGIGTRGSDGCPTTGDYQ-EIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGK 345 (767)
T ss_pred HHHHHHhC----CeEEEEEcCCCCCCCCCcCccCCHH-HHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEE
Confidence 44667776 9999999999999999543333332 234544444444311 1123578999999
Q ss_pred chHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 177 GHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 177 S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
|+||.+++.+|...|..++++|.+++.
T Consensus 346 SY~G~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 346 SYLGTLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred cHHHHHHHHHHhhCCCcceEEEeeCCC
Confidence 999999999999989899999988763
No 110
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.14 E-value=3.9e-10 Score=94.45 Aligned_cols=103 Identities=16% Similarity=0.178 Sum_probs=62.4
Q ss_pred EEEecCCCCC-ccchHhHHHHHHHHh-hhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCc
Q 017180 93 ILMIPTISDV-STVEEWRLVAQDIVQ-RVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESD 170 (376)
Q Consensus 93 vvllHG~~~~-~~~~~~~~~~~~L~~-~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 170 (376)
||++||.+-. ++......+...+++ . |+.|+.+|||=..+. .....+++..+.+..+++... ......++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~----g~~v~~~~Yrl~p~~---~~p~~~~D~~~a~~~l~~~~~-~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAER----GFVVVSIDYRLAPEA---PFPAALEDVKAAYRWLLKNAD-KLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHH----TSEEEEEE---TTTS---STTHHHHHHHHHHHHHHHTHH-HHTEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhc----cEEEEEeeccccccc---cccccccccccceeeeccccc-cccccccc
Confidence 7899997744 233334455666665 5 899999999944221 122334444445555555510 00013678
Q ss_pred EEEEecchHHHHHHHHHHhCC----CCcceEEEeccC
Q 017180 171 LVIFGGGHAATLTVRAAKKNL----VKPTAIAAVAPT 203 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~~~p----~~v~~lvl~~p~ 203 (376)
++|+|+|.||.+++.++.+.. ..++++++++|.
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPW 109 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCH
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhccccc
Confidence 999999999999999988322 248999999983
No 111
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.11 E-value=4.8e-09 Score=90.86 Aligned_cols=227 Identities=10% Similarity=0.089 Sum_probs=126.5
Q ss_pred CCcEEEecCCCCCccchHhHH--HHHHHHhhhCCcceEEEEeCCCCCcCCCCCC----CCCCHHHHH----------HHH
Q 017180 90 SKNILMIPTISDVSTVEEWRL--VAQDIVQRVGKVNWRATIVDWPGLGYSDRPK----MDYNADVME----------KFV 153 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~--~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~----~~~~~~~~~----------~~l 153 (376)
+|.+|.+.|.| .+....+. ++..|.+. |+..+.+..|-||.-.+.. .-.+..++. ..|
T Consensus 92 rp~~IhLagTG--Dh~f~rR~~l~a~pLl~~----gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~L 165 (348)
T PF09752_consen 92 RPVCIHLAGTG--DHGFWRRRRLMARPLLKE----GIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRAL 165 (348)
T ss_pred CceEEEecCCC--ccchhhhhhhhhhHHHHc----CcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHH
Confidence 67888899988 65443332 25666665 9999999999998754322 111222211 112
Q ss_pred HHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCc
Q 017180 154 VDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPG 233 (376)
Q Consensus 154 ~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (376)
..+++..+ ..++.+.|.||||.+|...|...|..+..+-.+++..+... +....+....
T Consensus 166 l~Wl~~~G------~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~v---------------Ft~Gvls~~i 224 (348)
T PF09752_consen 166 LHWLEREG------YGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVV---------------FTEGVLSNSI 224 (348)
T ss_pred HHHHHhcC------CCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcc---------------hhhhhhhcCC
Confidence 23334445 67999999999999999999999988777767766432100 0001111110
Q ss_pred hhhHHhhhhhccHHHHHHHHHhcccC---------CCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHH
Q 017180 234 VGWMMYNMLVSNEKAIQSQYKSHVYS---------NPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQ 304 (376)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (376)
.-..+.... . .............. .....+.+.+ .++....+. ..
T Consensus 225 ~W~~L~~q~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~-----------------~~m~~~md~-------~T 278 (348)
T PF09752_consen 225 NWDALEKQF-E-DTVYEEEISDIPAQNKSLPLDSMEERRRDREAL-----------------RFMRGVMDS-------FT 278 (348)
T ss_pred CHHHHHHHh-c-ccchhhhhcccccCcccccchhhccccchHHHH-----------------HHHHHHHHh-------hc
Confidence 000000000 0 00000000000000 0000111111 111110000 00
Q ss_pred HHhccc---CCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCCCC-CCCCChHHHHHHHHHHHH
Q 017180 305 LFADLE---GKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALL-PQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 305 ~~~~i~---~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~e~pe~~~~~i~~fl~ 369 (376)
.+.+.+ ..-.+.++.+++|.++|......+.+..|++++..+++||. .++-+.+.|.++|.+=+.
T Consensus 279 ~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 279 HLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPGGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred cccccCCCCCCCcEEEEEecCceEechhhcchHHHhCCCCeEEEecCCcEEEeeechHHHHHHHHHHhh
Confidence 111110 13467888999999999988889999999999999999998 677788899999988664
No 112
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.05 E-value=7.9e-08 Score=89.37 Aligned_cols=123 Identities=15% Similarity=0.156 Sum_probs=78.7
Q ss_pred ceeEEEEecccC-CCCCCCcEEEecCCCCCccchHhHHHH------------------HHHHhhhCCcceEEEEeCCC-C
Q 017180 74 SINIYYEKHERE-SPDPSKNILMIPTISDVSTVEEWRLVA------------------QDIVQRVGKVNWRATIVDWP-G 133 (376)
Q Consensus 74 g~~l~y~~~g~~-~~~~~~~vvllHG~~~~~~~~~~~~~~------------------~~L~~~~~~~~~~Vi~~D~~-G 133 (376)
+.+++|.-.... +++..|.||+++|.+ +++..+..+. ..+.+ ..+|+.+|.| |
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGP--G~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-----~~~~l~iDqP~G 132 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGP--GCSSMFALLAENGPCLMNETTGDIYNNTYSWNN-----EAYVIYVDQPAG 132 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCC--cHHHHHhhhccCCCeEEeCCCCceeECCccccc-----ccCeEEEeCCCC
Confidence 456666655432 223378999999998 6655442211 01122 4789999975 8
Q ss_pred CcCCCC--CCCCCCHHHHHHHHHHHHhCCCCCC-CCCCCcEEEEecchHHHHHHHHHHhC----------CCCcceEEEe
Q 017180 134 LGYSDR--PKMDYNADVMEKFVVDLINAPDSPV-SSSESDLVIFGGGHAATLTVRAAKKN----------LVKPTAIAAV 200 (376)
Q Consensus 134 ~G~S~~--~~~~~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~lvG~S~Gg~ia~~~a~~~----------p~~v~~lvl~ 200 (376)
+|.|-. .....+.++.++|+.++++..-... .....+++|+|||+||.++..+|.+- .-.++++++.
T Consensus 133 ~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IG 212 (462)
T PTZ00472 133 VGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVG 212 (462)
T ss_pred cCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEe
Confidence 888862 2234556778888888876431000 01258899999999999998887731 1346788887
Q ss_pred ccC
Q 017180 201 APT 203 (376)
Q Consensus 201 ~p~ 203 (376)
+|.
T Consensus 213 Ng~ 215 (462)
T PTZ00472 213 NGL 215 (462)
T ss_pred ccc
Confidence 764
No 113
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.04 E-value=4.3e-08 Score=86.16 Aligned_cols=109 Identities=8% Similarity=0.000 Sum_probs=77.5
Q ss_pred CCCcEEEecCCCCC---ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhC-CCCCC
Q 017180 89 PSKNILMIPTISDV---STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINA-PDSPV 164 (376)
Q Consensus 89 ~~~~vvllHG~~~~---~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~-l~~~~ 164 (376)
..|.|||+||.|.. .....++.+...+++. ++.-|+.+|||=--+.. .+...++-.+.+..+.+. +. ..
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~---~~~vvvSVdYRLAPEh~---~Pa~y~D~~~Al~w~~~~~~~-~~ 161 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAE---LNCVVVSVDYRLAPEHP---FPAAYDDGWAALKWVLKNSWL-KL 161 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHH---cCeEEEecCcccCCCCC---CCccchHHHHHHHHHHHhHHH-Hh
Confidence 36889999998733 2356788888888765 37999999999544333 334556666666666654 10 00
Q ss_pred CCCCCcEEEEecchHHHHHHHHHHh------CCCCcceEEEeccCC
Q 017180 165 SSSESDLVIFGGGHAATLTVRAAKK------NLVKPTAIAAVAPTW 204 (376)
Q Consensus 165 ~~~~~~~~lvG~S~Gg~ia~~~a~~------~p~~v~~lvl~~p~~ 204 (376)
....++++|+|-|.||.||..+|.+ .+.++++.|++-|..
T Consensus 162 ~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~ 207 (336)
T KOG1515|consen 162 GADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFF 207 (336)
T ss_pred CCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEeccc
Confidence 1246779999999999999998883 246789999999965
No 114
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.02 E-value=2.6e-09 Score=89.50 Aligned_cols=111 Identities=10% Similarity=0.114 Sum_probs=70.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhh----hCCcceEEEEeCCCCCcCCCCCCC-CCCHHHHHHHHHHHHhCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQR----VGKVNWRATIVDWPGLGYSDRPKM-DYNADVMEKFVVDLINAPDSPV 164 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~----~~~~~~~Vi~~D~~G~G~S~~~~~-~~~~~~~~~~l~~~l~~l~~~~ 164 (376)
+.|||||||.+ ++...|+.+...+.+. .....++++++|+......-.... ....+...+.+..+++.....
T Consensus 4 g~pVlFIhG~~--Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~- 80 (225)
T PF07819_consen 4 GIPVLFIHGNA--GSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSN- 80 (225)
T ss_pred CCEEEEECcCC--CCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhc-
Confidence 67899999999 8888888887777321 112258899999877532211111 111222333444444444100
Q ss_pred CCCCCcEEEEecchHHHHHHHHHHhC---CCCcceEEEeccC
Q 017180 165 SSSESDLVIFGGGHAATLTVRAAKKN---LVKPTAIAAVAPT 203 (376)
Q Consensus 165 ~~~~~~~~lvG~S~Gg~ia~~~a~~~---p~~v~~lvl~~p~ 203 (376)
....+++++|||||||.+|..+.... ++.|+.+|.++.+
T Consensus 81 ~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 81 RPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTP 122 (225)
T ss_pred cCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCC
Confidence 11478899999999999998887643 3578899888653
No 115
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.00 E-value=2.5e-08 Score=77.07 Aligned_cols=173 Identities=18% Similarity=0.149 Sum_probs=107.2
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCc
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESD 170 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 170 (376)
+.+|.+||+.+++ ..+|+.. +.+++ -.+-.+++. ....-..++|.+.+.+.+... .++
T Consensus 3 ~~~lIVpG~~~Sg-~~HWq~~---we~~l----~~a~rveq~-------~w~~P~~~dWi~~l~~~v~a~-------~~~ 60 (181)
T COG3545 3 TDVLIVPGYGGSG-PNHWQSR---WESAL----PNARRVEQD-------DWEAPVLDDWIARLEKEVNAA-------EGP 60 (181)
T ss_pred ceEEEecCCCCCC-hhHHHHH---HHhhC----ccchhcccC-------CCCCCCHHHHHHHHHHHHhcc-------CCC
Confidence 4589999988333 4667542 22221 111112211 113456788888888777776 567
Q ss_pred EEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHH
Q 017180 171 LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQ 250 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (376)
++||+||+|+..+++++.+....|.++.|++|.-.. ++....
T Consensus 61 ~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~--------------------------------------~~~~~~ 102 (181)
T COG3545 61 VVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVS--------------------------------------RPEIRP 102 (181)
T ss_pred eEEEEecccHHHHHHHHHhhhhccceEEEecCCCcc--------------------------------------ccccch
Confidence 999999999999999999766699999999984200 000000
Q ss_pred HHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHH
Q 017180 251 SQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAE 330 (376)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~ 330 (376)
... ..+. + . -...+ .-|.+++..++|++++.+.
T Consensus 103 -~~~-~tf~-----------------------------------~-------~-p~~~l--pfps~vvaSrnDp~~~~~~ 135 (181)
T COG3545 103 -KHL-MTFD-----------------------------------P-------I-PREPL--PFPSVVVASRNDPYVSYEH 135 (181)
T ss_pred -hhc-cccC-----------------------------------C-------C-ccccC--CCceeEEEecCCCCCCHHH
Confidence 000 0000 0 0 00112 5599999999999999999
Q ss_pred HHHHhcccCCceEEEeCCC-CCCCC---CChHHHHHHHHHHHHhh
Q 017180 331 MEALKGAKGVTKFVEVPGA-LLPQE---EYPAMVAQELYQFLQQT 371 (376)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~-H~~~~---e~pe~~~~~i~~fl~~~ 371 (376)
++.+++..+.. ++....+ |+--. ....+....+.+|+.+.
T Consensus 136 a~~~a~~wgs~-lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~~ 179 (181)
T COG3545 136 AEDLANAWGSA-LVDVGEGGHINAESGFGPWPEGYALLAQLLSRA 179 (181)
T ss_pred HHHHHHhccHh-heecccccccchhhcCCCcHHHHHHHHHHhhhh
Confidence 99999887654 4555555 88433 23344666677777654
No 116
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.00 E-value=1.1e-08 Score=86.55 Aligned_cols=111 Identities=11% Similarity=0.068 Sum_probs=71.3
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHH-hhhCCcceEEEEeCCCCC----cC-C---CCCC------C-C-CCHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIV-QRVGKVNWRATIVDWPGL----GY-S---DRPK------M-D-YNADVMEKF 152 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~-~~~~~~~~~Vi~~D~~G~----G~-S---~~~~------~-~-~~~~~~~~~ 152 (376)
..|.|||||++ ++...+..++..+. +.......=++-++--|+ |. + ..|- . . .+....++.
T Consensus 11 ~tPTifihG~~--gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 11 TTPTIFIHGYG--GTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp -EEEEEE--TT--GGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred CCcEEEECCCC--CChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 45799999999 99999999999997 542211222344444443 22 1 1221 1 2 356778888
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCC-----CCcceEEEeccCC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNL-----VKPTAIAAVAPTW 204 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p-----~~v~~lvl~~p~~ 204 (376)
+..++..|..++ ..+++-+|||||||..++.++..+. ..+.++|.++.++
T Consensus 89 l~~vl~~L~~~Y--~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pf 143 (255)
T PF06028_consen 89 LKKVLKYLKKKY--HFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPF 143 (255)
T ss_dssp HHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--T
T ss_pred HHHHHHHHHHhc--CCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEecccc
Confidence 888887775444 4788999999999999999988642 2579999998754
No 117
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.98 E-value=5.4e-08 Score=86.63 Aligned_cols=107 Identities=11% Similarity=0.037 Sum_probs=69.1
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.|.||++||.+.. ++......+...+... .|+.|+.+|||---+-. ....+++..+.+..+.++.. ......
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~---~g~~vv~vdYrlaPe~~---~p~~~~d~~~a~~~l~~~~~-~~g~dp 151 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAA---AGAVVVSVDYRLAPEHP---FPAALEDAYAAYRWLRANAA-ELGIDP 151 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHH---cCCEEEecCCCCCCCCC---CCchHHHHHHHHHHHHhhhH-hhCCCc
Confidence 6899999997744 2333332444444432 28999999999654432 33455554444444444421 111236
Q ss_pred CcEEEEecchHHHHHHHHHHhCC----CCcceEEEeccC
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNL----VKPTAIAAVAPT 203 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p----~~v~~lvl~~p~ 203 (376)
++++|+|+|.||.+++.++..-. ......+++.|.
T Consensus 152 ~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~ 190 (312)
T COG0657 152 SRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPL 190 (312)
T ss_pred cceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecc
Confidence 78999999999999999988433 256788999884
No 118
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.96 E-value=2.6e-08 Score=87.56 Aligned_cols=255 Identities=11% Similarity=0.084 Sum_probs=135.1
Q ss_pred CCcEEEecCCCCCccchHhH-----HHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHH-HH----HHHHHhC
Q 017180 90 SKNILMIPTISDVSTVEEWR-----LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVME-KF----VVDLINA 159 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~-----~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~-~~----l~~~l~~ 159 (376)
++|++++|-+- ..-+.|+ .++..|.+. |+.|+.+|+++=..+.. ..+.+++. +. +..+.+.
T Consensus 107 ~~PlLiVpP~i--Nk~yi~Dl~~~~s~V~~l~~~----g~~vfvIsw~nPd~~~~---~~~~edYi~e~l~~aid~v~~i 177 (445)
T COG3243 107 KRPLLIVPPWI--NKFYILDLSPEKSLVRWLLEQ----GLDVFVISWRNPDASLA---AKNLEDYILEGLSEAIDTVKDI 177 (445)
T ss_pred CCceEeecccc--CceeEEeCCCCccHHHHHHHc----CCceEEEeccCchHhhh---hccHHHHHHHHHHHHHHHHHHH
Confidence 67899999987 6555543 456666665 99999999997766653 34555555 34 4444444
Q ss_pred CCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCC-cceEEEeccCCCCCCCcc---cCCCCchhhhhHHHHhhhccCc-h
Q 017180 160 PDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVK-PTAIAAVAPTWAGPLPIV---FGRDSSMETRYGLLRGTLRAPG-V 234 (376)
Q Consensus 160 l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~ 234 (376)
.+ .+++.++|++.||.++..+++.++.+ |++++++.....-..+.. +......+....-+......+. .
T Consensus 178 tg------~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ 251 (445)
T COG3243 178 TG------QKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWY 251 (445)
T ss_pred hC------ccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHH
Confidence 44 68899999999999999999988877 999988754331111110 1111001111110000001111 1
Q ss_pred hhHHhhhhhccHHHHHHHHHhcccCC--------------CCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHH
Q 017180 235 GWMMYNMLVSNEKAIQSQYKSHVYSN--------------PDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE 300 (376)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (376)
....|.++ +....+...+.+..... ....+......+.+.....+.. ..+.....+
T Consensus 252 ma~~F~mL-rpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l------~~g~~~v~G--- 321 (445)
T COG3243 252 MAIVFFLL-RPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRL------IRGGLEVSG--- 321 (445)
T ss_pred HHHHHHhc-CccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChh------hccceEECC---
Confidence 11122222 11222222222222211 1122222222222111111000 000000000
Q ss_pred HHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCC-ceEEEeCCCCCCCCCCh-H----H----HHHHHHHHHHh
Q 017180 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGV-TKFVEVPGALLPQEEYP-A----M----VAQELYQFLQQ 370 (376)
Q Consensus 301 ~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~H~~~~e~p-e----~----~~~~i~~fl~~ 370 (376)
..-.+.+| +||++++.|++|.+.|.+.........++ ++++..+.||....-+| . . .-..+.+|+.+
T Consensus 322 -~~VdL~~I--t~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~ 398 (445)
T COG3243 322 -TMVDLGDI--TCPVYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLSRSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSG 398 (445)
T ss_pred -EEechhhc--ccceEEEeecccccCCHHHHHHHHHhcCCceEEEEecCceEEEEeCCcchhhhhcCCCCcchHHHHHHh
Confidence 01124566 99999999999999999888888777666 77888877798554432 1 1 12356677765
Q ss_pred hc
Q 017180 371 TF 372 (376)
Q Consensus 371 ~~ 372 (376)
..
T Consensus 399 a~ 400 (445)
T COG3243 399 AK 400 (445)
T ss_pred hc
Confidence 53
No 119
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.96 E-value=7.6e-09 Score=81.87 Aligned_cols=99 Identities=9% Similarity=0.057 Sum_probs=74.3
Q ss_pred cEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcE
Q 017180 92 NILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDL 171 (376)
Q Consensus 92 ~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~ 171 (376)
.+||+-|=+ +....=..++..|++. |+.|+.+|-+=|=.+. .+.++.++|+..+++....+. ..+++
T Consensus 4 ~~v~~SGDg--Gw~~~d~~~a~~l~~~----G~~VvGvdsl~Yfw~~-----rtP~~~a~Dl~~~i~~y~~~w--~~~~v 70 (192)
T PF06057_consen 4 LAVFFSGDG--GWRDLDKQIAEALAKQ----GVPVVGVDSLRYFWSE-----RTPEQTAADLARIIRHYRARW--GRKRV 70 (192)
T ss_pred EEEEEeCCC--CchhhhHHHHHHHHHC----CCeEEEechHHHHhhh-----CCHHHHHHHHHHHHHHHHHHh--CCceE
Confidence 467777766 5544445778888887 9999999977665554 456788888888887664333 36789
Q ss_pred EEEecchHHHHHHHHHHhCC----CCcceEEEeccC
Q 017180 172 VIFGGGHAATLTVRAAKKNL----VKPTAIAAVAPT 203 (376)
Q Consensus 172 ~lvG~S~Gg~ia~~~a~~~p----~~v~~lvl~~p~ 203 (376)
+|+|+|+|+-+.-....+-| ++|..++|++|.
T Consensus 71 vLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 71 VLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred EEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 99999999988777666544 478899999884
No 120
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.96 E-value=5.3e-09 Score=82.40 Aligned_cols=192 Identities=13% Similarity=0.081 Sum_probs=110.7
Q ss_pred EEEecccCCCCCCCcEEEecCCC-CCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCCCHHHHHHHHHH
Q 017180 78 YYEKHERESPDPSKNILMIPTIS-DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEKFVVD 155 (376)
Q Consensus 78 ~y~~~g~~~~~~~~~vvllHG~~-~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~~l~~ 155 (376)
....+|+.+. .+..|||||.- ..++...-..++..+.++ ||+|..++ ||.+... ...-++.+...-+.-
T Consensus 57 ~VDIwg~~~~--~klfIfIHGGYW~~g~rk~clsiv~~a~~~----gY~vasvg---Y~l~~q~htL~qt~~~~~~gv~f 127 (270)
T KOG4627|consen 57 LVDIWGSTNQ--AKLFIFIHGGYWQEGDRKMCLSIVGPAVRR----GYRVASVG---YNLCPQVHTLEQTMTQFTHGVNF 127 (270)
T ss_pred EEEEecCCCC--ccEEEEEecchhhcCchhcccchhhhhhhc----CeEEEEec---cCcCcccccHHHHHHHHHHHHHH
Confidence 4566775544 67889999832 112222222334444444 99999985 4555432 223344455555555
Q ss_pred HHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH-hCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCch
Q 017180 156 LINAPDSPVSSSESDLVIFGGGHAATLTVRAAK-KNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGV 234 (376)
Q Consensus 156 ~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~-~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (376)
+++... ..+.+.+-|||.|+.+|+.+.. .+-.+|.++++.++..
T Consensus 128 ilk~~~-----n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY------------------------------ 172 (270)
T KOG4627|consen 128 ILKYTE-----NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVY------------------------------ 172 (270)
T ss_pred HHHhcc-----cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHh------------------------------
Confidence 566654 3455777799999999998766 4455788888776521
Q ss_pred hhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCc
Q 017180 235 GWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLP 314 (376)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~P 314 (376)
. ++. +....+.+.-..+.+..+.. .+ ....+..+ +.|
T Consensus 173 -----~--------l~E-L~~te~g~dlgLt~~~ae~~---------------------Sc------dl~~~~~v--~~~ 209 (270)
T KOG4627|consen 173 -----D--------LRE-LSNTESGNDLGLTERNAESV---------------------SC------DLWEYTDV--TVW 209 (270)
T ss_pred -----h--------HHH-HhCCccccccCcccchhhhc---------------------Cc------cHHHhcCc--eee
Confidence 0 000 00000100001111110000 00 12235566 899
Q ss_pred EEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCC
Q 017180 315 LLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEY 356 (376)
Q Consensus 315 vlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~ 356 (376)
+|++.|++|..--.+.-+.+......+++..+++. |+-.+|+
T Consensus 210 ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 210 ILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIEE 252 (270)
T ss_pred eeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHHH
Confidence 99999999976666777777777777899999997 9955544
No 121
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.95 E-value=5.7e-08 Score=80.40 Aligned_cols=109 Identities=9% Similarity=0.049 Sum_probs=69.8
Q ss_pred CCcEEEecCCCCCccchHhHHH--HHHHHhhhCCcceEEEEeCCCCCcCCC---C--CCCCCCHHHHHHHHHHHHhCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLV--AQDIVQRVGKVNWRATIVDWPGLGYSD---R--PKMDYNADVMEKFVVDLINAPDS 162 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~--~~~L~~~~~~~~~~Vi~~D~~G~G~S~---~--~~~~~~~~~~~~~l~~~l~~l~~ 162 (376)
.|.||++||.+ .+...+... +..|+++ .||-|+.|+........ . ......-..-...|.++++++..
T Consensus 16 ~PLVv~LHG~~--~~a~~~~~~s~~~~lAd~---~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~ 90 (220)
T PF10503_consen 16 VPLVVVLHGCG--QSAEDFAAGSGWNALADR---EGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAA 90 (220)
T ss_pred CCEEEEeCCCC--CCHHHHHhhcCHHHHhhc---CCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhh
Confidence 57788889999 877766442 3456653 37999999854211100 0 00000001112334444444433
Q ss_pred CCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 163 PVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 163 ~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
++.+...+|++.|+|.||+++..++..+|+.+.++..+++.
T Consensus 91 ~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~ 131 (220)
T PF10503_consen 91 RYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGV 131 (220)
T ss_pred hcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccc
Confidence 33456789999999999999999999999999999888763
No 122
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.94 E-value=1.2e-08 Score=85.43 Aligned_cols=105 Identities=12% Similarity=0.118 Sum_probs=77.6
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCC----CC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSP----VS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~----~~ 165 (376)
=|.|||+||+. .....|..++.++++. ||-|+++|+...+.. ......+..++.+..+.+.+... ..
T Consensus 17 yPVv~f~~G~~--~~~s~Ys~ll~hvASh----GyIVV~~d~~~~~~~---~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~ 87 (259)
T PF12740_consen 17 YPVVLFLHGFL--LINSWYSQLLEHVASH----GYIVVAPDLYSIGGP---DDTDEVASAAEVIDWLAKGLESKLPLGVK 87 (259)
T ss_pred cCEEEEeCCcC--CCHHHHHHHHHHHHhC----ceEEEEecccccCCC---CcchhHHHHHHHHHHHHhcchhhcccccc
Confidence 46788889999 7777799999999998 999999997765432 22233444444455444433311 11
Q ss_pred CCCCcEEEEecchHHHHHHHHHHhC-----CCCcceEEEeccC
Q 017180 166 SSESDLVIFGGGHAATLTVRAAKKN-----LVKPTAIAAVAPT 203 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~~p~ 203 (376)
....++.|+|||-||-+|..++..+ ..+++++++++|.
T Consensus 88 ~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 88 PDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred ccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 2456899999999999999999976 5689999999994
No 123
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.93 E-value=7.8e-09 Score=87.23 Aligned_cols=99 Identities=13% Similarity=0.119 Sum_probs=85.4
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCc
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESD 170 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 170 (376)
|||.++|+.+ +....|..+...|.. ...|+.++.||+|.-. ....+++++++...+.|.... +..+
T Consensus 1 ~pLF~fhp~~--G~~~~~~~L~~~l~~-----~~~v~~l~a~g~~~~~--~~~~~l~~~a~~yv~~Ir~~Q-----P~GP 66 (257)
T COG3319 1 PPLFCFHPAG--GSVLAYAPLAAALGP-----LLPVYGLQAPGYGAGE--QPFASLDDMAAAYVAAIRRVQ-----PEGP 66 (257)
T ss_pred CCEEEEcCCC--CcHHHHHHHHHHhcc-----CceeeccccCcccccc--cccCCHHHHHHHHHHHHHHhC-----CCCC
Confidence 4799999999 999999999999998 6999999999998633 245789999999998888887 5789
Q ss_pred EEEEecchHHHHHHHHHHh---CCCCcceEEEeccC
Q 017180 171 LVIFGGGHAATLTVRAAKK---NLVKPTAIAAVAPT 203 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~~---~p~~v~~lvl~~p~ 203 (376)
++|+|+|+||.+|..+|.+ .-+.|..|+++++.
T Consensus 67 y~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~ 102 (257)
T COG3319 67 YVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAV 102 (257)
T ss_pred EEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccC
Confidence 9999999999999999983 34578999999874
No 124
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.90 E-value=4.2e-07 Score=74.08 Aligned_cols=250 Identities=10% Similarity=0.046 Sum_probs=145.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC---------CCCCCCCHHHHHHHHHHHHhCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD---------RPKMDYNADVMEKFVVDLINAP 160 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~---------~~~~~~~~~~~~~~l~~~l~~l 160 (376)
++-|++|.|++ +....|.+++..|-..+++ .++|+.+-.-||-.-. .....++.++.++-=.+|+++.
T Consensus 29 ~~li~~IpGNP--G~~gFY~~F~~~L~~~l~~-r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~ 105 (301)
T KOG3975|consen 29 KPLIVWIPGNP--GLLGFYTEFARHLHLNLID-RLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEY 105 (301)
T ss_pred ceEEEEecCCC--CchhHHHHHHHHHHHhccc-ccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHh
Confidence 67788899999 9999999999988875331 2668888888875432 1124678888888777888776
Q ss_pred CCCCCCCCCcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccCCCC----CCCcccCCCCchhhhhHHHHhhhccCch
Q 017180 161 DSPVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPTWAG----PLPIVFGRDSSMETRYGLLRGTLRAPGV 234 (376)
Q Consensus 161 ~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (376)
- ..+.+++++|||.|+.+.+..... ---.|.+.+++-|+... +.-..... ...++.... +.
T Consensus 106 ~----Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~------~l~~~~hv~---~l 172 (301)
T KOG3975|consen 106 V----PKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTK------VLRYLPHVV---SL 172 (301)
T ss_pred C----CCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeee------eeeeehhhh---he
Confidence 4 237889999999999999998773 22357888888775311 00000000 000000000 00
Q ss_pred hhH-HhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHH----HHHHHhcc
Q 017180 235 GWM-MYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREE----FLQLFADL 309 (376)
Q Consensus 235 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i 309 (376)
... .+.. -+.+++..+.+.... .....++............ ..+..+ .+.+ ...++ ..+..++-
T Consensus 173 t~yi~~~~---lp~~ir~~Li~~~l~-~~n~p~e~l~tal~l~h~~----v~rn~v-~la~--qEm~eV~~~d~e~~een 241 (301)
T KOG3975|consen 173 TSYIYWIL---LPGFIRFILIKFMLC-GSNGPQEFLSTALFLTHPQ----VVRNSV-GLAA--QEMEEVTTRDIEYCEEN 241 (301)
T ss_pred eeeeeeec---ChHHHHHHHHHHhcc-cCCCcHHHHhhHHHhhcHH----HHHHHh-hhch--HHHHHHHHhHHHHHHhc
Confidence 000 1111 145555433332222 2234444443222211110 000000 0000 00000 12233333
Q ss_pred cCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEe-CCC-CCCCCCChHHHHHHHHHHH
Q 017180 310 EGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEV-PGA-LLPQEEYPAMVAQELYQFL 368 (376)
Q Consensus 310 ~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~-~~~-H~~~~e~pe~~~~~i~~fl 368 (376)
.+-+.+..|..|.+||.+....+++..|..++..- ++. |.....+.+..+..+.+.+
T Consensus 242 --~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Ldedki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 242 --LDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDEDKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred --CcEEEEEccCCCCCcchHHHHHHhhhcchhceeeccccCCcceeecccHHHHHHHHHhh
Confidence 56789999999999999999999998886655544 456 9998888888888888765
No 125
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.86 E-value=1.8e-08 Score=84.13 Aligned_cols=165 Identities=16% Similarity=0.146 Sum_probs=89.9
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC-----cCCC------------CCC-----------
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL-----GYSD------------RPK----------- 141 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~-----G~S~------------~~~----------- 141 (376)
++.||+|||++ ++...++.....|.+.+.+.++..+.+|-|-- |-.. .+.
T Consensus 4 k~riLcLHG~~--~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 4 KPRILCLHGYG--QNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp --EEEEE--TT----HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CceEEEeCCCC--cCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 66799999999 99999988887777754422588888775522 1110 110
Q ss_pred CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh--------CCCCcceEEEeccCCCCCCCcccC
Q 017180 142 MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK--------NLVKPTAIAAVAPTWAGPLPIVFG 213 (376)
Q Consensus 142 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--------~p~~v~~lvl~~p~~~~~~~~~~~ 213 (376)
....+++..+.|.+++++.+ .=.-|+|+|.||.+|..++.. ....++-+|++++...
T Consensus 82 ~~~~~~~sl~~l~~~i~~~G-------PfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p-------- 146 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENG-------PFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPP-------- 146 (212)
T ss_dssp GG---HHHHHHHHHHHHHH----------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES------------
T ss_pred cccCHHHHHHHHHHHHHhcC-------CeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCC--------
Confidence 02234555556666666654 135689999999999988862 1234677888876310
Q ss_pred CCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccC
Q 017180 214 RDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLL 293 (376)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (376)
. . .. .. ..
T Consensus 147 --------------------------~---~-~~-----~~-~~------------------------------------ 154 (212)
T PF03959_consen 147 --------------------------P---D-PD-----YQ-EL------------------------------------ 154 (212)
T ss_dssp --------------------------E---E-E------GT-TT------------------------------------
T ss_pred --------------------------C---c-hh-----hh-hh------------------------------------
Confidence 0 0 00 00 00
Q ss_pred CCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCC-ceEEEeCCCCCCCCC
Q 017180 294 DPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGV-TKFVEVPGALLPQEE 355 (376)
Q Consensus 294 ~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~H~~~~e 355 (376)
+ .-..| ++|+|-|+|++|.+++.+..+.+.+...+ .+++..++||.+...
T Consensus 155 --------~--~~~~i--~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~gGH~vP~~ 205 (212)
T PF03959_consen 155 --------Y--DEPKI--SIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHDGGHHVPRK 205 (212)
T ss_dssp --------T----TT-----EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEESSSSS----
T ss_pred --------h--ccccC--CCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEECCCCcCcCC
Confidence 0 11234 78999999999999999988988877766 889999999775544
No 126
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.84 E-value=9.3e-09 Score=94.03 Aligned_cols=94 Identities=14% Similarity=0.143 Sum_probs=70.4
Q ss_pred ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC--CCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHH
Q 017180 103 STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM--DYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAA 180 (376)
Q Consensus 103 ~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~--~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg 180 (376)
.....|..+++.|.+. ||.+ ..|++|+|.+.+... ....+.+.+.++++.++.+ .++++|+||||||
T Consensus 105 ~~~~~~~~li~~L~~~----GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g------~~kV~LVGHSMGG 173 (440)
T PLN02733 105 DEVYYFHDMIEQLIKW----GYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASG------GKKVNIISHSMGG 173 (440)
T ss_pred chHHHHHHHHHHHHHc----CCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcC------CCCEEEEEECHhH
Confidence 5568999999999996 7755 899999999875432 1223444444445555554 6799999999999
Q ss_pred HHHHHHHHhCCCC----cceEEEeccCCCCC
Q 017180 181 TLTVRAAKKNLVK----PTAIAAVAPTWAGP 207 (376)
Q Consensus 181 ~ia~~~a~~~p~~----v~~lvl~~p~~~~~ 207 (376)
.+++.++..+|+. |+++|.+++++.+.
T Consensus 174 lva~~fl~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 174 LLVKCFMSLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHHHHHHHHCCHhHHhHhccEEEECCCCCCC
Confidence 9999999887764 78899998866443
No 127
>PRK04940 hypothetical protein; Provisional
Probab=98.83 E-value=4.6e-07 Score=71.69 Aligned_cols=54 Identities=9% Similarity=-0.110 Sum_probs=37.7
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhcccCCc-eEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAKGVT-KFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
.-..+++..+.|.+.+.+.+.... .++ ++++.+|| |-. +.=+.....|.+|+++
T Consensus 124 p~r~~vllq~gDEvLDyr~a~~~y---~~~y~~~v~~GGdH~f--~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 124 RDRCLVILSRNDEVLDSQRTAEEL---HPYYEIVWDEEQTHKF--KNISPHLQRIKAFKTL 179 (180)
T ss_pred cccEEEEEeCCCcccCHHHHHHHh---ccCceEEEECCCCCCC--CCHHHHHHHHHHHHhc
Confidence 345699999999999876555433 233 57888999 862 3344578888899853
No 128
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.80 E-value=4e-07 Score=73.25 Aligned_cols=58 Identities=17% Similarity=0.194 Sum_probs=49.2
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCCCCCCCCChHHHHHHHHHHHHhh
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
++|.|-|.|+.|.+++.+..+.+.+.+++..+...++||++.-.. .+.+.|.+||+..
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~HpggH~VP~~~--~~~~~i~~fi~~~ 220 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFKDATVLEHPGGHIVPNKA--KYKEKIADFIQSF 220 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcCCCeEEecCCCccCCCch--HHHHHHHHHHHHH
Confidence 899999999999999999999999999999888888889976555 4666677777654
No 129
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.80 E-value=7.6e-07 Score=80.10 Aligned_cols=103 Identities=16% Similarity=0.199 Sum_probs=77.2
Q ss_pred CCcEEEecCCCCCccchHhH------HHHHHHHhhhCCcceEEEEeCCCCCcCCCC-----C-----CCCCCHHHHHH-H
Q 017180 90 SKNILMIPTISDVSTVEEWR------LVAQDIVQRVGKVNWRATIVDWPGLGYSDR-----P-----KMDYNADVMEK-F 152 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~------~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~-----~-----~~~~~~~~~~~-~ 152 (376)
+|+|+|.||+. .++..|- .+.-.|+++ ||.|..-..||--.|.+ + -.+++..+++. |
T Consensus 73 rp~Vll~HGLl--~sS~~Wv~n~p~~sLaf~Lada----GYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yD 146 (403)
T KOG2624|consen 73 RPVVLLQHGLL--ASSSSWVLNGPEQSLAFLLADA----GYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYD 146 (403)
T ss_pred CCcEEEeeccc--cccccceecCccccHHHHHHHc----CCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcC
Confidence 78899999999 8888874 345667776 99999999999766642 1 13455555443 4
Q ss_pred HHH----HHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCC---CcceEEEeccCC
Q 017180 153 VVD----LINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV---KPTAIAAVAPTW 204 (376)
Q Consensus 153 l~~----~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~p~~ 204 (376)
|-+ +++.-+ .++++.||||.|+..........|+ +|+..++++|..
T Consensus 147 LPA~IdyIL~~T~------~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 147 LPAMIDYILEKTG------QEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred HHHHHHHHHHhcc------ccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 444 444443 6889999999999999988887665 799999999964
No 130
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.80 E-value=2e-07 Score=77.69 Aligned_cols=88 Identities=16% Similarity=0.242 Sum_probs=67.7
Q ss_pred ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHH
Q 017180 103 STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATL 182 (376)
Q Consensus 103 ~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~i 182 (376)
++...|..+...|.. +++|+++|++|+|.+... ..+.+.+++.+.+.+.... ...+++++|||+||.+
T Consensus 10 ~~~~~~~~~~~~l~~-----~~~v~~~~~~g~~~~~~~--~~~~~~~~~~~~~~l~~~~-----~~~~~~l~g~s~Gg~~ 77 (212)
T smart00824 10 SGPHEYARLAAALRG-----RRDVSALPLPGFGPGEPL--PASADALVEAQAEAVLRAA-----GGRPFVLVGHSSGGLL 77 (212)
T ss_pred CcHHHHHHHHHhcCC-----CccEEEecCCCCCCCCCC--CCCHHHHHHHHHHHHHHhc-----CCCCeEEEEECHHHHH
Confidence 566789999999987 799999999999876643 2456676666555544332 2578999999999999
Q ss_pred HHHHHHh---CCCCcceEEEecc
Q 017180 183 TVRAAKK---NLVKPTAIAAVAP 202 (376)
Q Consensus 183 a~~~a~~---~p~~v~~lvl~~p 202 (376)
+...+.+ .++.+.+++++++
T Consensus 78 a~~~a~~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 78 AHAVAARLEARGIPPAAVVLLDT 100 (212)
T ss_pred HHHHHHHHHhCCCCCcEEEEEcc
Confidence 9988884 4567889988875
No 131
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.78 E-value=5.1e-08 Score=78.29 Aligned_cols=176 Identities=14% Similarity=0.141 Sum_probs=112.0
Q ss_pred CCcEEEecCCCCCccch-HhHHHHHHHHhhhCCcceEEEEeCC-CCCcCCCC-CC-------CCCCHHHHHHHHHHHHhC
Q 017180 90 SKNILMIPTISDVSTVE-EWRLVAQDIVQRVGKVNWRATIVDW-PGLGYSDR-PK-------MDYNADVMEKFVVDLINA 159 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~-~~~~~~~~L~~~~~~~~~~Vi~~D~-~G~G~S~~-~~-------~~~~~~~~~~~l~~~l~~ 159 (376)
+..||+|--+. +... .-+..++.++.. ||.|++||+ +|=-.|.. +. ...+.+..-.++..+++.
T Consensus 39 ~~~li~i~Dvf--G~~~~n~r~~Adk~A~~----Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~ 112 (242)
T KOG3043|consen 39 KKVLIVIQDVF--GFQFPNTREGADKVALN----GYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKW 112 (242)
T ss_pred CeEEEEEEeee--ccccHHHHHHHHHHhcC----CcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHH
Confidence 34566665544 3333 356677788876 999999995 44112221 11 234444445555555555
Q ss_pred CCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHh
Q 017180 160 PDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMY 239 (376)
Q Consensus 160 l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (376)
+... ....++-++|..|||.++..+....| ++.+.+..-|+.
T Consensus 113 lk~~--g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~----------------------------------- 154 (242)
T KOG3043|consen 113 LKNH--GDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSF----------------------------------- 154 (242)
T ss_pred HHHc--CCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCc-----------------------------------
Confidence 4311 13678999999999999988887766 667777665521
Q ss_pred hhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEE
Q 017180 240 NMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVS 319 (376)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~ 319 (376)
. + .+..+++ ++|+|++.
T Consensus 155 --~-------------------------------------------------------d----~~D~~~v--k~Pilfl~ 171 (242)
T KOG3043|consen 155 --V-------------------------------------------------------D----SADIANV--KAPILFLF 171 (242)
T ss_pred --C-------------------------------------------------------C----hhHHhcC--CCCEEEEe
Confidence 0 0 0123344 89999999
Q ss_pred eCCCCCCCHHHHHHHhcc---cC--CceEEEeCCC-CCCC-----CCCh------HHHHHHHHHHHHhhc
Q 017180 320 TEGSPRRSKAEMEALKGA---KG--VTKFVEVPGA-LLPQ-----EEYP------AMVAQELYQFLQQTF 372 (376)
Q Consensus 320 G~~D~~~~~~~~~~~~~~---~~--~~~~~~~~~~-H~~~-----~e~p------e~~~~~i~~fl~~~~ 372 (376)
|+.|..+|++....+.+. .+ ..++.++++. |..+ .+.| |+..+.+..|+.+.+
T Consensus 172 ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 172 AELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred ecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 999999998877766543 23 2468999998 8754 3444 455667778887654
No 132
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.77 E-value=2.2e-08 Score=82.30 Aligned_cols=105 Identities=13% Similarity=0.101 Sum_probs=73.5
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHH---HhCC-CCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDL---INAP-DSPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~---l~~l-~~~~~ 165 (376)
=|.|+|+||+. -....|..++.+++.. ||-|+++++-.- . .+.....++..++.+.++ ++++ -....
T Consensus 46 yPVilF~HG~~--l~ns~Ys~lL~HIASH----GfIVVAPQl~~~--~-~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~ 116 (307)
T PF07224_consen 46 YPVILFLHGFN--LYNSFYSQLLAHIASH----GFIVVAPQLYTL--F-PPDGQDEIKSAASVINWLPEGLQHVLPENVE 116 (307)
T ss_pred ccEEEEeechh--hhhHHHHHHHHHHhhc----CeEEEechhhcc--c-CCCchHHHHHHHHHHHHHHhhhhhhCCCCcc
Confidence 46788889999 8889999999999998 999999998643 1 122222223322222222 2222 12233
Q ss_pred CCCCcEEEEecchHHHHHHHHHHhCC--CCcceEEEeccC
Q 017180 166 SSESDLVIFGGGHAATLTVRAAKKNL--VKPTAIAAVAPT 203 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~~~p--~~v~~lvl~~p~ 203 (376)
....++.++|||.||-.|..+|..+. -.+++||.++|.
T Consensus 117 ~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 117 ANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPV 156 (307)
T ss_pred cccceEEEeecCCccHHHHHHHhcccccCchhheeccccc
Confidence 35678999999999999999999653 347889999884
No 133
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.69 E-value=1.2e-07 Score=79.97 Aligned_cols=109 Identities=10% Similarity=0.108 Sum_probs=68.1
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+..+||+||+. .+...-..-+..+...++. .-.++.+.||..|.-. -.....+...-...+.++++.+.... ..
T Consensus 18 ~~vlvfVHGyn--~~f~~a~~r~aql~~~~~~-~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~--~~ 92 (233)
T PF05990_consen 18 KEVLVFVHGYN--NSFEDALRRAAQLAHDLGF-PGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAP--GI 92 (233)
T ss_pred CeEEEEEeCCC--CCHHHHHHHHHHHHHHhCC-CceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhcc--CC
Confidence 56899999999 6654432323333332211 2389999999888532 11112233334445556665554211 26
Q ss_pred CcEEEEecchHHHHHHHHHHh----CC-----CCcceEEEeccC
Q 017180 169 SDLVIFGGGHAATLTVRAAKK----NL-----VKPTAIAAVAPT 203 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~----~p-----~~v~~lvl~~p~ 203 (376)
++++|++||||+.+.+..... .+ .++..+|+++|.
T Consensus 93 ~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApD 136 (233)
T PF05990_consen 93 KRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPD 136 (233)
T ss_pred ceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCC
Confidence 889999999999999987552 22 367889999884
No 134
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.66 E-value=1.6e-07 Score=82.38 Aligned_cols=102 Identities=12% Similarity=0.145 Sum_probs=59.8
Q ss_pred CCcEEEecCCCCCccchH--------------h----HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-----CCCCH
Q 017180 90 SKNILMIPTISDVSTVEE--------------W----RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-----MDYNA 146 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~--------------~----~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-----~~~~~ 146 (376)
-|.||++||-+ ...+. + ......|+++ ||-|+++|.+|+|+..... ..++.
T Consensus 115 ~PAVL~lHgHg--~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~----GYVvla~D~~g~GER~~~e~~~~~~~~~~ 188 (390)
T PF12715_consen 115 FPAVLCLHGHG--GGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKR----GYVVLAPDALGFGERGDMEGAAQGSNYDC 188 (390)
T ss_dssp EEEEEEE--TT----HHHHCT---SSGCG--STTSTTT-HHHHHHTT----TSEEEEE--TTSGGG-SSCCCTTTTS--H
T ss_pred CCEEEEeCCCC--CCcccccCCcccccccchhhccccccHHHHHHhC----CCEEEEEccccccccccccccccccchhH
Confidence 67899999876 43322 1 1346788887 9999999999999876332 11222
Q ss_pred HHHHHHH------------------HHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEec
Q 017180 147 DVMEKFV------------------VDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVA 201 (376)
Q Consensus 147 ~~~~~~l------------------~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~ 201 (376)
+.++..+ .++++.+. .+..++|.++|+||||..++.+|+.- ++|+..|..+
T Consensus 189 ~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slp---eVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~ 257 (390)
T PF12715_consen 189 QALARNLLMLGRSLAGLMAWDDMRALDFLASLP---EVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANG 257 (390)
T ss_dssp HHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-T---TEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES
T ss_pred HHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCc---ccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhh
Confidence 2222211 23444432 44567899999999999999999864 3787777654
No 135
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.66 E-value=5.6e-09 Score=92.34 Aligned_cols=114 Identities=14% Similarity=0.240 Sum_probs=62.3
Q ss_pred CCcEEEecCCCCCccchHh-HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEW-RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~-~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+|++|++|||........| ..+...+.+.. ..+++||++|+...-...-...........+.|..+|..|........
T Consensus 71 ~pt~iiiHGw~~~~~~~~~~~~~~~all~~~-~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~ 149 (331)
T PF00151_consen 71 KPTVIIIHGWTGSGSSESWIQDMIKALLQKD-TGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVPP 149 (331)
T ss_dssp SEEEEEE--TT-TT-TTTHHHHHHHHHHCC---S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---G
T ss_pred CCeEEEEcCcCCcccchhHHHHHHHHHHhhc-cCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCCh
Confidence 7899999999943312344 44445443310 017999999996432211000111122333444444444321111246
Q ss_pred CcEEEEecchHHHHHHHHHHhCCC--CcceEEEeccCC
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLV--KPTAIAAVAPTW 204 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~p~~ 204 (376)
++++|||||+|+.+|-.++..... +|.+++.++|+.
T Consensus 150 ~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAg 187 (331)
T PF00151_consen 150 ENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAG 187 (331)
T ss_dssp GGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-
T ss_pred hHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccc
Confidence 889999999999999999997666 899999999964
No 136
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.65 E-value=3.5e-07 Score=76.24 Aligned_cols=50 Identities=18% Similarity=0.263 Sum_probs=36.5
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
+...+++.... .+..+++.|+|.|.||-+|+.+|..+| .|+++|.++|..
T Consensus 7 e~Ai~~L~~~p---~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~ 56 (213)
T PF08840_consen 7 EEAIDWLKSHP---EVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSS 56 (213)
T ss_dssp HHHHHHHHCST---TB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--S
T ss_pred HHHHHHHHhCC---CCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCce
Confidence 34444444442 123578999999999999999999999 899999999853
No 137
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.63 E-value=9.8e-07 Score=86.72 Aligned_cols=221 Identities=15% Similarity=0.097 Sum_probs=130.7
Q ss_pred CceeEEEEecccCCC--CCC-CcEEEecCCCCC-----ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC----
Q 017180 73 NSINIYYEKHERESP--DPS-KNILMIPTISDV-----STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP---- 140 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~--~~~-~~vvllHG~~~~-----~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~---- 140 (376)
+|+..++...-+++- ..+ |.||.+||.+.+ ...-.|..+ ..... |+-|+.+|.||-|.....
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~----g~~v~~vd~RGs~~~G~~~~~~ 579 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSR----GFAVLQVDGRGSGGYGWDFRSA 579 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccC----CeEEEEEcCCCcCCcchhHHHH
Confidence 577777766544321 113 455666998831 223345333 34444 899999999999876421
Q ss_pred --C--CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceE-EEeccCCCCCCCcccCCC
Q 017180 141 --K--MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAI-AAVAPTWAGPLPIVFGRD 215 (376)
Q Consensus 141 --~--~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~l-vl~~p~~~~~~~~~~~~~ 215 (376)
. .....++....+..+++..- ...+++.++|+|.||.+++..+...|+.+-+. +.++|..
T Consensus 580 ~~~~lG~~ev~D~~~~~~~~~~~~~----iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVt----------- 644 (755)
T KOG2100|consen 580 LPRNLGDVEVKDQIEAVKKVLKLPF----IDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVT----------- 644 (755)
T ss_pred hhhhcCCcchHHHHHHHHHHHhccc----ccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEeccee-----------
Confidence 1 24566666666666766652 34678999999999999999999988555544 8888842
Q ss_pred CchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCC
Q 017180 216 SSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDP 295 (376)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (376)
... ++... -..+.+ . ...+....|.+..
T Consensus 645 --------------d~~-----~yds~-~terym----g---------~p~~~~~~y~e~~------------------- 672 (755)
T KOG2100|consen 645 --------------DWL-----YYDST-YTERYM----G---------LPSENDKGYEESS------------------- 672 (755)
T ss_pred --------------eee-----eeccc-ccHhhc----C---------CCccccchhhhcc-------------------
Confidence 100 00000 000000 0 0000000000000
Q ss_pred CCcHHHHHHHHhcccCCCc-EEEEEeCCCCCCCHHHHHHHh----cccCCceEEEeCCC-CCCCCCCh-HHHHHHHHHHH
Q 017180 296 VNSREEFLQLFADLEGKLP-LLVVSTEGSPRRSKAEMEALK----GAKGVTKFVEVPGA-LLPQEEYP-AMVAQELYQFL 368 (376)
Q Consensus 296 ~~~~~~~~~~~~~i~~~~P-vlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~~~~~-H~~~~e~p-e~~~~~i~~fl 368 (376)
....+..+ +.| .|++||+.|..+..+....+. ...-..+..++|+. |....-.. ..+...+..|+
T Consensus 673 ------~~~~~~~~--~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~ 744 (755)
T KOG2100|consen 673 ------VSSPANNI--KTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFL 744 (755)
T ss_pred ------ccchhhhh--ccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHH
Confidence 11223334 444 499999999998766555443 33223889999999 99766543 56788899999
Q ss_pred HhhcCC
Q 017180 369 QQTFEP 374 (376)
Q Consensus 369 ~~~~~~ 374 (376)
...+..
T Consensus 745 ~~~~~~ 750 (755)
T KOG2100|consen 745 RDCFGS 750 (755)
T ss_pred HHHcCc
Confidence 977654
No 138
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.62 E-value=1.5e-08 Score=83.60 Aligned_cols=86 Identities=10% Similarity=0.167 Sum_probs=52.3
Q ss_pred CcEEEecCCCCCc-cchHhHHHHHHHHhhhCCcceE---EEEeCCCCCcCCCCCCC-C---CCHHHHHHHHHHHHhCCCC
Q 017180 91 KNILMIPTISDVS-TVEEWRLVAQDIVQRVGKVNWR---ATIVDWPGLGYSDRPKM-D---YNADVMEKFVVDLINAPDS 162 (376)
Q Consensus 91 ~~vvllHG~~~~~-~~~~~~~~~~~L~~~~~~~~~~---Vi~~D~~G~G~S~~~~~-~---~~~~~~~~~l~~~l~~l~~ 162 (376)
.||||+||.+ + ....|..+.+.|.++ ||. |+++++-....+..... . .+..++++.+..+++.-+
T Consensus 2 ~PVVlVHG~~--~~~~~~w~~~~~~l~~~----GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TG- 74 (219)
T PF01674_consen 2 RPVVLVHGTG--GNAYSNWSTLAPYLKAA----GYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTG- 74 (219)
T ss_dssp --EEEE--TT--TTTCGGCCHHHHHHHHT----T--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT-
T ss_pred CCEEEECCCC--cchhhCHHHHHHHHHHc----CCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhC-
Confidence 3699999999 7 668899999999997 999 89999965544331111 1 111233444444444544
Q ss_pred CCCCCCCcEEEEecchHHHHHHHHHHh
Q 017180 163 PVSSSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 163 ~~~~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
. +|-||||||||.++..+..-
T Consensus 75 -----a-kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 75 -----A-KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp --------EEEEEETCHHHHHHHHHHH
T ss_pred -----C-EEEEEEcCCcCHHHHHHHHH
Confidence 4 89999999999999988774
No 139
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.59 E-value=2.8e-07 Score=78.59 Aligned_cols=100 Identities=16% Similarity=0.108 Sum_probs=68.3
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHH-HhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDL-INAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~-l~~l~~~~~~~~ 168 (376)
+..|+++-|..+.-... ++..-.+. ||.|+.+.+|||+.|...+........++.+.++ |+.++ ...
T Consensus 243 q~LvIC~EGNAGFYEvG----~m~tP~~l----gYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lg----f~~ 310 (517)
T KOG1553|consen 243 QDLVICFEGNAGFYEVG----VMNTPAQL----GYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLG----FRQ 310 (517)
T ss_pred ceEEEEecCCccceEee----eecChHHh----CceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcC----CCc
Confidence 34567778876221111 22222333 8999999999999998544333333334444444 66676 246
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
+.+++.|+|.||.-++.+|..+|+ |+++||-+.
T Consensus 311 edIilygWSIGGF~~~waAs~YPd-VkavvLDAt 343 (517)
T KOG1553|consen 311 EDIILYGWSIGGFPVAWAASNYPD-VKAVVLDAT 343 (517)
T ss_pred cceEEEEeecCCchHHHHhhcCCC-ceEEEeecc
Confidence 789999999999999999999996 788888765
No 140
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.56 E-value=4.5e-06 Score=72.97 Aligned_cols=59 Identities=22% Similarity=0.343 Sum_probs=42.4
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHh----ccc-CCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALK----GAK-GVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~----~~~-~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
+.|++|.+|..|.++|....+.+. +.. .+++++.++++ |....-. -......||.+.++
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~---~~~~a~~Wl~~rf~ 283 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFA---SAPDALAWLDDRFA 283 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhc---CcHHHHHHHHHHHC
Confidence 789999999999999987776663 445 57888999988 9853211 11335578877654
No 141
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.51 E-value=1.1e-06 Score=75.64 Aligned_cols=110 Identities=15% Similarity=0.216 Sum_probs=73.6
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHh------HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEW------RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNA 146 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~------~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~ 146 (376)
|++.|--..-..+..+++..||+.-|.+ ..-+.. +..+..+++. .+.+|+.+.+||.|.|..+. +.
T Consensus 120 D~~~IDt~~I~~~~a~~~RWiL~s~GNg--~~~E~~~~~~~~~~~~~~~ak~---~~aNvl~fNYpGVg~S~G~~---s~ 191 (365)
T PF05677_consen 120 DGVKIDTMAIHQPEAKPQRWILVSNGNG--ECYENRAMLDYKDDWIQRFAKE---LGANVLVFNYPGVGSSTGPP---SR 191 (365)
T ss_pred CCEEEEEEEeeCCCCCCCcEEEEEcCCh--HHhhhhhhhccccHHHHHHHHH---cCCcEEEECCCccccCCCCC---CH
Confidence 4666544443333334478999999988 554441 1224444443 27999999999999998553 45
Q ss_pred HHHHHHHHHHHhCCCC-CCCCCCCcEEEEecchHHHHHHHHHHhC
Q 017180 147 DVMEKFVVDLINAPDS-PVSSSESDLVIFGGGHAATLTVRAAKKN 190 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~-~~~~~~~~~~lvG~S~Gg~ia~~~a~~~ 190 (376)
++++.+-.+.++.+.. ......+.+++.|||+||.++..+..++
T Consensus 192 ~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 192 KDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 7888887777766642 1112347799999999999999866654
No 142
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.50 E-value=5e-06 Score=68.24 Aligned_cols=109 Identities=10% Similarity=0.023 Sum_probs=75.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhh--CCcceEEEEeCCCCC----cCCC----CCC-------CCCCHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRV--GKVNWRATIVDWPGL----GYSD----RPK-------MDYNADVMEKF 152 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~--~~~~~~Vi~~D~~G~----G~S~----~~~-------~~~~~~~~~~~ 152 (376)
.-|.|||||.+ ++.......+..|.... ++ .-=++.+|--|- |.=+ .|. ...+..++...
T Consensus 45 ~iPTIfIhGsg--G~asS~~~Mv~ql~~~~~~~~-e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~w 121 (288)
T COG4814 45 AIPTIFIHGSG--GTASSLNGMVNQLLPDYKAGT-ESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKW 121 (288)
T ss_pred ccceEEEecCC--CChhHHHHHHHHhhhcccccc-cceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHH
Confidence 45789999999 88888888888888731 00 123566676662 2111 121 34566777888
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCC-----CCcceEEEeccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNL-----VKPTAIAAVAPT 203 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p-----~~v~~lvl~~p~ 203 (376)
+..++..|+..+ ...++.+|||||||.-...|+..+. ..++++|.++..
T Consensus 122 lk~~msyL~~~Y--~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 122 LKKAMSYLQKHY--NIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred HHHHHHHHHHhc--CCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 888887776555 4778999999999999999888432 247888888764
No 143
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.48 E-value=1.6e-07 Score=81.81 Aligned_cols=95 Identities=13% Similarity=0.113 Sum_probs=62.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC--cCCCCCCCC---CCHH---HHHHHHHHHHhCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL--GYSDRPKMD---YNAD---VMEKFVVDLINAPD 161 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~--G~S~~~~~~---~~~~---~~~~~l~~~l~~l~ 161 (376)
-|.|||-||.| +....|..+++.+++. ||-|.++|.||- |..+..... +... +-..|+..+++.|.
T Consensus 71 ~PlvvlshG~G--s~~~~f~~~A~~lAs~----Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~ 144 (365)
T COG4188 71 LPLVVLSHGSG--SYVTGFAWLAEHLASY----GFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALL 144 (365)
T ss_pred CCeEEecCCCC--CCccchhhhHHHHhhC----ceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHH
Confidence 46667779999 8888898999999997 999999999993 444321111 2211 11123332222221
Q ss_pred -------CCCCCCCCcEEEEecchHHHHHHHHHHhC
Q 017180 162 -------SPVSSSESDLVIFGGGHAATLTVRAAKKN 190 (376)
Q Consensus 162 -------~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~ 190 (376)
........+|.++|||+||..++..+...
T Consensus 145 ~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~ 180 (365)
T COG4188 145 QLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAE 180 (365)
T ss_pred HhhcCcccccccCccceEEEecccccHHHHHhcccc
Confidence 11122456899999999999999998743
No 144
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.47 E-value=2.8e-06 Score=71.28 Aligned_cols=122 Identities=9% Similarity=-0.034 Sum_probs=69.2
Q ss_pred CCceeEEEEecccCC---CCCC-CcEEEecCCCCCccchHhHHHHHHHHh-------hhCCcceEEEEeCCC-CCcCCCC
Q 017180 72 ENSINIYYEKHERES---PDPS-KNILMIPTISDVSTVEEWRLVAQDIVQ-------RVGKVNWRATIVDWP-GLGYSDR 139 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~---~~~~-~~vvllHG~~~~~~~~~~~~~~~~L~~-------~~~~~~~~Vi~~D~~-G~G~S~~ 139 (376)
..|.+|.|+..-+.. .+.- |.|||+||.+ ..+..-+. .+.+ ...+-++-|++|.+- =+-.++.
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgag--q~g~dn~~---~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~ 243 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAG--QGGSDNDK---VLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE 243 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCC--CCCchhhh---hhhcCccceeeecccCceEEEccccccccccccc
Confidence 346677777665421 1112 6789999988 54443322 3333 000012344444421 1222222
Q ss_pred CCCCCCHHHHHHHHH-HHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 140 PKMDYNADVMEKFVV-DLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 140 ~~~~~~~~~~~~~l~-~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
... .-.....+.+. .+.++.+ ....+++++|.|+||.-++.++.++|+.+.+.+++++.
T Consensus 244 ~t~-~~l~~~idli~~vlas~yn----ID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 244 KTL-LYLIEKIDLILEVLASTYN----IDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred ccc-hhHHHHHHHHHHHHhhccC----cccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 111 11222333333 2334443 34678999999999999999999999999999999873
No 145
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.46 E-value=7.6e-07 Score=80.58 Aligned_cols=106 Identities=7% Similarity=0.118 Sum_probs=57.4
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCC-C-C---------C-------C------CCC-
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYS-D-R---------P-------K------MDY- 144 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S-~-~---------~-------~------~~~- 144 (376)
=|.|||-||++ ++...+..++..|+.+ ||=|+++|.|..-.+ . . . . ...
T Consensus 100 ~PvvIFSHGlg--g~R~~yS~~~~eLAS~----GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (379)
T PF03403_consen 100 FPVVIFSHGLG--GSRTSYSAICGELASH----GYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFD 173 (379)
T ss_dssp EEEEEEE--TT----TTTTHHHHHHHHHT----T-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----
T ss_pred CCEEEEeCCCC--cchhhHHHHHHHHHhC----CeEEEEeccCCCceeEEEeccCCCccccccccccccccceecccccc
Confidence 46788889999 9999999999999998 999999999954211 0 0 0 0 000
Q ss_pred CHHH----------HHHHHHHHH---hCCC--CC---------------CCCCCCcEEEEecchHHHHHHHHHHhCCCCc
Q 017180 145 NADV----------MEKFVVDLI---NAPD--SP---------------VSSSESDLVIFGGGHAATLTVRAAKKNLVKP 194 (376)
Q Consensus 145 ~~~~----------~~~~l~~~l---~~l~--~~---------------~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v 194 (376)
..+. -++++..++ +.++ .. ..+...++.++|||+||..++..+.+. .++
T Consensus 174 ~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~ 252 (379)
T PF03403_consen 174 PEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRF 252 (379)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT-
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCc
Confidence 0001 111222222 2111 00 001234699999999999999887765 578
Q ss_pred ceEEEecc
Q 017180 195 TAIAAVAP 202 (376)
Q Consensus 195 ~~lvl~~p 202 (376)
++.|+++|
T Consensus 253 ~~~I~LD~ 260 (379)
T PF03403_consen 253 KAGILLDP 260 (379)
T ss_dssp -EEEEES-
T ss_pred ceEEEeCC
Confidence 99999987
No 146
>PLN02606 palmitoyl-protein thioesterase
Probab=98.44 E-value=5.2e-05 Score=65.02 Aligned_cols=104 Identities=8% Similarity=0.025 Sum_probs=67.4
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
..|||+.||+++..+...+..+.+.+.+.- ++.+..+- .|-|. ....-....+.++.+.+-+..... ...
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~---~~pg~~v~-ig~~~--~~s~~~~~~~Qv~~vce~l~~~~~----L~~ 95 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHS---GYPGTCVE-IGNGV--QDSLFMPLRQQASIACEKIKQMKE----LSE 95 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCC---CCCeEEEE-ECCCc--ccccccCHHHHHHHHHHHHhcchh----hcC
Confidence 457999999996666667878887775210 44444443 22221 111223445555555555544221 134
Q ss_pred cEEEEecchHHHHHHHHHHhCCC--CcceEEEeccC
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLV--KPTAIAAVAPT 203 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~p~ 203 (376)
-+.++|+|-||.++-.++.+.|+ .|+.+|.+++.
T Consensus 96 G~naIGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 96 GYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred ceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 59999999999999999999887 59999988753
No 147
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.41 E-value=2.2e-05 Score=72.93 Aligned_cols=123 Identities=17% Similarity=0.195 Sum_probs=73.1
Q ss_pred ceeEEEEecccCC-CCCCCcEEEecCCCCCccchHhHHHHH-------------------HHHhhhCCcceEEEEeCCC-
Q 017180 74 SINIYYEKHERES-PDPSKNILMIPTISDVSTVEEWRLVAQ-------------------DIVQRVGKVNWRATIVDWP- 132 (376)
Q Consensus 74 g~~l~y~~~g~~~-~~~~~~vvllHG~~~~~~~~~~~~~~~-------------------~L~~~~~~~~~~Vi~~D~~- 132 (376)
+.+++|.-....+ ++..|.||.+.|.+ +++..|..+.+ .+.+ ..+|+-+|.|
T Consensus 23 ~~~lfyw~~~s~~~~~~~Pl~~wlnGGP--G~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~-----~an~l~iD~Pv 95 (415)
T PF00450_consen 23 NAHLFYWFFESRNDPEDDPLILWLNGGP--GCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNK-----FANLLFIDQPV 95 (415)
T ss_dssp TEEEEEEEEE-SSGGCSS-EEEEEE-TT--TB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGG-----TSEEEEE--ST
T ss_pred CcEEEEEEEEeCCCCCCccEEEEecCCc--eeccccccccccCceEEeeccccccccccccccc-----ccceEEEeecC
Confidence 4466665544322 23378899999999 77666632211 1112 4779999955
Q ss_pred CCcCCCCCC---CCCCHHHHHHHHHHHHhCCCCCC-CCCCCcEEEEecchHHHHHHHHHH----hC------CCCcceEE
Q 017180 133 GLGYSDRPK---MDYNADVMEKFVVDLINAPDSPV-SSSESDLVIFGGGHAATLTVRAAK----KN------LVKPTAIA 198 (376)
Q Consensus 133 G~G~S~~~~---~~~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~lvG~S~Gg~ia~~~a~----~~------p~~v~~lv 198 (376)
|-|.|-... ...+.++.++++.++|...-... .....+++|.|-|.||..+-.+|. .. +-.+++++
T Consensus 96 GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~ 175 (415)
T PF00450_consen 96 GTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIA 175 (415)
T ss_dssp TSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEE
T ss_pred ceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccce
Confidence 999997322 24577888888887775431000 012568999999999998877766 22 45588999
Q ss_pred EeccC
Q 017180 199 AVAPT 203 (376)
Q Consensus 199 l~~p~ 203 (376)
+.+|.
T Consensus 176 IGng~ 180 (415)
T PF00450_consen 176 IGNGW 180 (415)
T ss_dssp EESE-
T ss_pred ecCcc
Confidence 98874
No 148
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.39 E-value=2.8e-06 Score=71.58 Aligned_cols=105 Identities=14% Similarity=0.094 Sum_probs=70.9
Q ss_pred CCcEEEecCCCCCccchHhHHHH--HHHHhhhCCcceEEEEeC-CCCC------cCCCCCC----CCCCHHHHHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVA--QDIVQRVGKVNWRATIVD-WPGL------GYSDRPK----MDYNADVMEKFVVDL 156 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~--~~L~~~~~~~~~~Vi~~D-~~G~------G~S~~~~----~~~~~~~~~~~l~~~ 156 (376)
.|.||.+||-. ++....+... +.|+++ .||-|+.+| ++++ |.+-.|. .......+++.+..+
T Consensus 61 apLvv~LHG~~--~sgag~~~~sg~d~lAd~---~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l 135 (312)
T COG3509 61 APLVVVLHGSG--GSGAGQLHGTGWDALADR---EGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKL 135 (312)
T ss_pred CCEEEEEecCC--CChHHhhcccchhhhhcc---cCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHH
Confidence 46788889999 7776666554 667664 379999995 2221 2221121 122223333444444
Q ss_pred HhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 157 INAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 157 l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
+.+.+ +...+|++.|.|-||.++..++..+|+.+.++..++..
T Consensus 136 ~~~~g----idp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~ 178 (312)
T COG3509 136 VNEYG----IDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGL 178 (312)
T ss_pred HHhcC----cCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecc
Confidence 44444 44678999999999999999999999999999988764
No 149
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.37 E-value=2.3e-06 Score=68.47 Aligned_cols=105 Identities=12% Similarity=0.105 Sum_probs=67.2
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC------------------CCCCCCCHHHHHHH
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD------------------RPKMDYNADVMEKF 152 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~------------------~~~~~~~~~~~~~~ 152 (376)
.+||++||.+ .+...|..++..|.-. +..-|+|-.|=.-.+. .+...-.....++.
T Consensus 4 atIi~LHglG--Dsg~~~~~~~~~l~l~----NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~ 77 (206)
T KOG2112|consen 4 ATIIFLHGLG--DSGSGWAQFLKQLPLP----NIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADN 77 (206)
T ss_pred EEEEEEecCC--CCCccHHHHHHcCCCC----CeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHH
Confidence 4699999999 8888887777666554 6777777444221111 01122233444555
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
+..++++.-... ....++.+-|.|+||.+++..+..+|..+.+++-..+
T Consensus 78 i~~Li~~e~~~G-i~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~ 126 (206)
T KOG2112|consen 78 IANLIDNEPANG-IPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSG 126 (206)
T ss_pred HHHHHHHHHHcC-CCccceeEcccCchHHHHHHHHhccccccceeecccc
Confidence 566665532110 1245688899999999999999998877777766554
No 150
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.35 E-value=1.8e-05 Score=67.82 Aligned_cols=104 Identities=8% Similarity=-0.028 Sum_probs=69.0
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
..|+|+.||+|+..+......+.+.+.+ .. |..|.++.. |.+.....-....+.++.+.+-+..... ...
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~-~~--g~~~~~i~i---g~~~~~s~~~~~~~Qve~vce~l~~~~~----l~~ 94 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTN-LS--GSPGFCLEI---GNGVGDSWLMPLTQQAEIACEKVKQMKE----LSQ 94 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHh-CC--CCceEEEEE---CCCccccceeCHHHHHHHHHHHHhhchh----hhC
Confidence 4579999999966555566666666643 11 566666543 4433333344555555555555544321 134
Q ss_pred cEEEEecchHHHHHHHHHHhCCC--CcceEEEeccC
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLV--KPTAIAAVAPT 203 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~p~ 203 (376)
-++++|+|-||.++-.++.+.|+ .|+.+|.+++.
T Consensus 95 G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 95 GYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred cEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 59999999999999999999987 59999988753
No 151
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.33 E-value=1.5e-05 Score=73.69 Aligned_cols=206 Identities=14% Similarity=0.030 Sum_probs=126.9
Q ss_pred CCcEEEecCCCCCc---cchHhHH--HHHHHHhhhCCcceEEEEeCCCCCcCCC-C-------CCCCCCHHHHHHHHHHH
Q 017180 90 SKNILMIPTISDVS---TVEEWRL--VAQDIVQRVGKVNWRATIVDWPGLGYSD-R-------PKMDYNADVMEKFVVDL 156 (376)
Q Consensus 90 ~~~vvllHG~~~~~---~~~~~~~--~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~-------~~~~~~~~~~~~~l~~~ 156 (376)
=|+++++-|.+... +...|.. =+..|+.. ||-|+.+|-||.-.-. + .-....+++.++-+.-+
T Consensus 642 Yptvl~VYGGP~VQlVnnsfkgi~ylR~~~Lasl----Gy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~L 717 (867)
T KOG2281|consen 642 YPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASL----GYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQML 717 (867)
T ss_pred CceEEEEcCCCceEEeeccccceehhhhhhhhhc----ceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHH
Confidence 47899999988441 2222211 13456665 9999999999975432 1 11355678888888888
Q ss_pred HhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhh
Q 017180 157 INAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGW 236 (376)
Q Consensus 157 l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (376)
.++.+ ....++|.|-|+|.||.+++....++|+-++..|.-+|.. .+
T Consensus 718 aeq~g---fidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT------------------------------~W 764 (867)
T KOG2281|consen 718 AEQTG---FIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVT------------------------------DW 764 (867)
T ss_pred HHhcC---cccchheeEeccccccHHHHHHhhcCcceeeEEeccCcce------------------------------ee
Confidence 88876 2246789999999999999999999998777666655521 00
Q ss_pred HHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccC-CCcE
Q 017180 237 MMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEG-KLPL 315 (376)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~Pv 315 (376)
..+... -..+.+. .++.....| ..+ + +...+++++. +...
T Consensus 765 ~~YDTg-YTERYMg-------------~P~~nE~gY----------------~ag------S---V~~~VeklpdepnRL 805 (867)
T KOG2281|consen 765 RLYDTG-YTERYMG-------------YPDNNEHGY----------------GAG------S---VAGHVEKLPDEPNRL 805 (867)
T ss_pred eeeccc-chhhhcC-------------CCccchhcc----------------cch------h---HHHHHhhCCCCCceE
Confidence 001100 0011111 000000000 000 0 2222333321 4468
Q ss_pred EEEEeCCCCCCCHHHHHHH----hcccCCceEEEeCCC-CCC-CCCChHHHHHHHHHHHHhh
Q 017180 316 LVVSTEGSPRRSKAEMEAL----KGAKGVTKFVEVPGA-LLP-QEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 316 lii~G~~D~~~~~~~~~~~----~~~~~~~~~~~~~~~-H~~-~~e~pe~~~~~i~~fl~~~ 371 (376)
|++||--|.-|-..+..++ .++...-+++++|+- |.+ ..|..+-+-..|..||++.
T Consensus 806 lLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~~ 867 (867)
T KOG2281|consen 806 LLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQEN 867 (867)
T ss_pred EEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhhC
Confidence 9999999987765555544 456677899999999 996 4555666788899999863
No 152
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.30 E-value=0.00021 Score=63.58 Aligned_cols=103 Identities=10% Similarity=0.136 Sum_probs=65.9
Q ss_pred CCcEEEecCCCCCccchHhHHH---HHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHHHHHHHhCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLV---AQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKFVVDLINAPDSPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~---~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~l~~~l~~l~~~~~ 165 (376)
+|.||++||.|.. ......+ +..+.+... ...++++|+.-..--+ .-.-+.-+.+..+....+++..+
T Consensus 122 DpVlIYlHGGGY~--l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G---- 193 (374)
T PF10340_consen 122 DPVLIYLHGGGYF--LGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEG---- 193 (374)
T ss_pred CcEEEEEcCCeeE--ecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccC----
Confidence 7899999998833 2222112 222222222 4689999987553000 11123445566666677776666
Q ss_pred CCCCcEEEEecchHHHHHHHHHH--hC---CCCcceEEEecc
Q 017180 166 SSESDLVIFGGGHAATLTVRAAK--KN---LVKPTAIAAVAP 202 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~--~~---p~~v~~lvl~~p 202 (376)
.+.++|+|-|.||.+++.+.+ +. ....+++||++|
T Consensus 194 --~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISP 233 (374)
T PF10340_consen 194 --NKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISP 233 (374)
T ss_pred --CCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECC
Confidence 678999999999999998876 11 234689999998
No 153
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.30 E-value=0.00017 Score=65.66 Aligned_cols=101 Identities=6% Similarity=-0.034 Sum_probs=68.9
Q ss_pred CCcEEEe-----cCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCC
Q 017180 90 SKNILMI-----PTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPV 164 (376)
Q Consensus 90 ~~~vvll-----HG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~ 164 (376)
++|+|.+ ||-|-.+-+. =..+-..|.. |+.|+.+... ..|...-|+++.......|++++....
T Consensus 68 krP~vViDPRAGHGpGIGGFK~-dSevG~AL~~-----GHPvYFV~F~-----p~P~pgQTl~DV~~ae~~Fv~~V~~~h 136 (581)
T PF11339_consen 68 KRPFVVIDPRAGHGPGIGGFKP-DSEVGVALRA-----GHPVYFVGFF-----PEPEPGQTLEDVMRAEAAFVEEVAERH 136 (581)
T ss_pred CCCeEEeCCCCCCCCCccCCCc-ccHHHHHHHc-----CCCeEEEEec-----CCCCCCCcHHHHHHHHHHHHHHHHHhC
Confidence 5566666 5533112221 1244556666 8998887654 334455688888888888887765222
Q ss_pred CCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 165 SSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 165 ~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
. ...+.+|+|..-||+.++.+|+.+|+++.-+|+...
T Consensus 137 p-~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGa 173 (581)
T PF11339_consen 137 P-DAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGA 173 (581)
T ss_pred C-CCCCceEEeccHHHHHHHHHHhcCcCccCceeecCC
Confidence 1 123899999999999999999999999988887643
No 154
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.29 E-value=2.2e-06 Score=76.51 Aligned_cols=100 Identities=5% Similarity=0.092 Sum_probs=79.6
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceE---EEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWR---ATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSS 166 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~---Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 166 (376)
.-++|++||++ .+...|..+...+... |+. ++.+++++- ... -......+++.+-+.+++...+
T Consensus 59 ~~pivlVhG~~--~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~-~~~-~~~~~~~~ql~~~V~~~l~~~g----- 125 (336)
T COG1075 59 KEPIVLVHGLG--GGYGNFLPLDYRLAIL----GWLTNGVYAFELSGG-DGT-YSLAVRGEQLFAYVDEVLAKTG----- 125 (336)
T ss_pred CceEEEEccCc--CCcchhhhhhhhhcch----HHHhccccccccccc-CCC-ccccccHHHHHHHHHHHHhhcC-----
Confidence 44899999998 8889998888887775 777 999999876 211 1234456667777777777776
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCC--CCcceEEEeccC
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNL--VKPTAIAAVAPT 203 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p--~~v~~lvl~~p~ 203 (376)
.+++.++||||||.+...++...+ .+|+.++.+++.
T Consensus 126 -a~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 126 -AKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred -CCceEEEeecccchhhHHHHhhcCccceEEEEEEeccC
Confidence 688999999999999999988777 889999998763
No 155
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.24 E-value=6.9e-06 Score=67.70 Aligned_cols=59 Identities=8% Similarity=0.050 Sum_probs=51.6
Q ss_pred EEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCCCC-CCCCChHHHHHHHHHHHHhhcC
Q 017180 315 LLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALL-PQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 315 vlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
+.++.+++|..+|......+++..|++++..+++||. .++-+-+.+..+|.+-|++...
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~egGHVsayl~k~dlfRR~I~d~L~R~~k 368 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLEGGHVSAYLFKQDLFRRAIVDGLDRLDK 368 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEeecCceeeeehhchHHHHHHHHHHHhhhh
Confidence 4667889999999988889999999999999998888 6777888999999999988753
No 156
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.22 E-value=2.3e-06 Score=71.65 Aligned_cols=90 Identities=10% Similarity=0.089 Sum_probs=50.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHH----HHHHHHhCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK----FVVDLINAPDSPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~----~l~~~l~~l~~~~~ 165 (376)
.-.|||+||+. ++...|..+...+..... ++.--.+...++.... .....+++..++ .|.+.++...
T Consensus 4 ~hLvV~vHGL~--G~~~d~~~~~~~l~~~~~--~~~~~~i~~~~~~~n~-~~T~~gI~~~g~rL~~eI~~~~~~~~---- 74 (217)
T PF05057_consen 4 VHLVVFVHGLW--GNPADMRYLKNHLEKIPE--DLPNARIVVLGYSNNE-FKTFDGIDVCGERLAEEILEHIKDYE---- 74 (217)
T ss_pred CEEEEEeCCCC--CCHHHHHHHHHHHHHhhh--hcchhhhhhhcccccc-cccchhhHHHHHHHHHHHHHhccccc----
Confidence 45789999999 888889877777766100 1211122222221111 111233444444 4444444433
Q ss_pred CCCCcEEEEecchHHHHHHHHHH
Q 017180 166 SSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
....++++|||||||.++-.+..
T Consensus 75 ~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 75 SKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred cccccceEEEecccHHHHHHHHH
Confidence 11358999999999999876555
No 157
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.21 E-value=0.00029 Score=62.20 Aligned_cols=119 Identities=12% Similarity=0.235 Sum_probs=70.1
Q ss_pred EEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCC--CcCCCC--------------C
Q 017180 77 IYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPG--LGYSDR--------------P 140 (376)
Q Consensus 77 l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G--~G~S~~--------------~ 140 (376)
.-|+....+.. .-.||+|||.+ .+. .|-.++..|.+.+.+.||.++++.+|. ...... .
T Consensus 76 aL~~~~~~~~~--~G~vIilp~~g--~~~-d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~ 150 (310)
T PF12048_consen 76 ALWRPANSAKP--QGAVIILPDWG--EHP-DWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQ 150 (310)
T ss_pred EEEecccCCCC--ceEEEEecCCC--CCC-CcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCC
Confidence 34444444332 44799999998 553 344444455444444599999999987 111100 0
Q ss_pred CCC-------------CC----HHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCC-CCcceEEEecc
Q 017180 141 KMD-------------YN----ADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNL-VKPTAIAAVAP 202 (376)
Q Consensus 141 ~~~-------------~~----~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p-~~v~~lvl~~p 202 (376)
... .. .+.+.+-|.+.+..+... ...+++|+||+.|+..++.+..+.+ ..++++|++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~---~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a 227 (310)
T PF12048_consen 151 LSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQ---GGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINA 227 (310)
T ss_pred cCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeC
Confidence 000 00 112222333333333211 2556999999999999999988665 45899999998
Q ss_pred C
Q 017180 203 T 203 (376)
Q Consensus 203 ~ 203 (376)
.
T Consensus 228 ~ 228 (310)
T PF12048_consen 228 Y 228 (310)
T ss_pred C
Confidence 3
No 158
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.08 E-value=2.7e-05 Score=72.71 Aligned_cols=91 Identities=11% Similarity=0.018 Sum_probs=64.1
Q ss_pred HHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-------CCCCHHHHHHHHHHHHhCCCCCC-CCCCCcEEEEecchHHH
Q 017180 110 LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-------MDYNADVMEKFVVDLINAPDSPV-SSSESDLVIFGGGHAAT 181 (376)
Q Consensus 110 ~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-------~~~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~lvG~S~Gg~ 181 (376)
.++..|+++. |--||++.+|-||+|.+.. .-.|.++..+|+..|++.+.... .....|++++|.|.||+
T Consensus 49 ~~~~~lA~~~---~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~ 125 (434)
T PF05577_consen 49 GFMWELAKEF---GALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGA 125 (434)
T ss_dssp HHHHHHHHHH---TEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHH
T ss_pred ChHHHHHHHc---CCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhH
Confidence 3566777753 6899999999999997432 35788999999999887764221 11356899999999999
Q ss_pred HHHHHHHhCCCCcceEEEeccC
Q 017180 182 LTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 182 ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
+|.-+-.++|+.+.+.+.-++.
T Consensus 126 Laaw~r~kyP~~~~ga~ASSap 147 (434)
T PF05577_consen 126 LAAWFRLKYPHLFDGAWASSAP 147 (434)
T ss_dssp HHHHHHHH-TTT-SEEEEET--
T ss_pred HHHHHHhhCCCeeEEEEeccce
Confidence 9999999999999998887653
No 159
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.07 E-value=0.00012 Score=60.03 Aligned_cols=79 Identities=11% Similarity=0.087 Sum_probs=51.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceE-EEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWR-ATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~-Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+..|||+.||| .+...+.++. +.+ ++. ++++|||-.-. .. + + . ..
T Consensus 11 ~~LilfF~GWg--~d~~~f~hL~--~~~-----~~D~l~~yDYr~l~~--------d~-----~---~-~--------~y 56 (213)
T PF04301_consen 11 KELILFFAGWG--MDPSPFSHLI--LPE-----NYDVLICYDYRDLDF--------DF-----D---L-S--------GY 56 (213)
T ss_pred CeEEEEEecCC--CChHHhhhcc--CCC-----CccEEEEecCccccc--------cc-----c---c-c--------cC
Confidence 34789999999 8877776542 122 344 55688873321 10 1 1 1 15
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
+.+.||++|||-.+|.++.... .++.-|.++++.
T Consensus 57 ~~i~lvAWSmGVw~A~~~l~~~--~~~~aiAINGT~ 90 (213)
T PF04301_consen 57 REIYLVAWSMGVWAANRVLQGI--PFKRAIAINGTP 90 (213)
T ss_pred ceEEEEEEeHHHHHHHHHhccC--CcceeEEEECCC
Confidence 6799999999999998876543 356777787653
No 160
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.05 E-value=0.00027 Score=65.92 Aligned_cols=123 Identities=13% Similarity=-0.002 Sum_probs=78.3
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccc-hHh--HHHHH---HHHhhhCCcceEEEEeCCCCCcCCCCCCC-CC-
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTV-EEW--RLVAQ---DIVQRVGKVNWRATIVDWPGLGYSDRPKM-DY- 144 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~-~~~--~~~~~---~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~-~~- 144 (376)
||++|+...+-+...++.|+++..+-++..... ..+ ....+ .++.+ ||-|+..|.||.|.|+..-. .+
T Consensus 28 DGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~----GYavV~qDvRG~~~SeG~~~~~~~ 103 (563)
T COG2936 28 DGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQ----GYAVVNQDVRGRGGSEGVFDPESS 103 (563)
T ss_pred CCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecC----ceEEEEecccccccCCcccceecc
Confidence 588887666655443336777777833311221 011 11222 34554 99999999999999995432 22
Q ss_pred -CHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 145 -NADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 145 -~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
..++-.+.|..+.++- -...+|..+|.|++|...+.+|+..|..++.++...+..
T Consensus 104 ~E~~Dg~D~I~Wia~Qp-----WsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~ 159 (563)
T COG2936 104 REAEDGYDTIEWLAKQP-----WSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLV 159 (563)
T ss_pred ccccchhHHHHHHHhCC-----ccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccc
Confidence 2333333333333322 247889999999999999999998888888888776643
No 161
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.04 E-value=1.1e-05 Score=69.51 Aligned_cols=109 Identities=9% Similarity=-0.031 Sum_probs=62.0
Q ss_pred CCcEEEecCCCCCccchHh--HHHHHHHHhhhCCcceEEEEeCCCCCcCCC-----------CCCCCCCHHH----HHHH
Q 017180 90 SKNILMIPTISDVSTVEEW--RLVAQDIVQRVGKVNWRATIVDWPGLGYSD-----------RPKMDYNADV----MEKF 152 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~--~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-----------~~~~~~~~~~----~~~~ 152 (376)
=|+|+++||.. .....+ ...++.+.+...-...-|++++..+.+.-. ........+. +.++
T Consensus 24 ~PvlylldG~~--~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~e 101 (251)
T PF00756_consen 24 YPVLYLLDGQS--GWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEE 101 (251)
T ss_dssp EEEEEEESHTT--HHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTH
T ss_pred CEEEEEccCCc--cccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhcc
Confidence 46777789964 333333 233444444210001456667766555110 0011111222 3344
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
|..+|++.- .....+..|+|+||||..|+.++.++|+.+.+++.++|.
T Consensus 102 l~p~i~~~~---~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 102 LIPYIEANY---RTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHHHHHHS---SEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred chhHHHHhc---ccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 455554432 011222799999999999999999999999999999984
No 162
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.01 E-value=0.00091 Score=57.07 Aligned_cols=57 Identities=11% Similarity=0.098 Sum_probs=46.9
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhc----ccCCceEEEeCCC-CCCCC-CChHHHHHHHHHHH
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKG----AKGVTKFVEVPGA-LLPQE-EYPAMVAQELYQFL 368 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~-H~~~~-e~pe~~~~~i~~fl 368 (376)
.+|-|+|.++.|.+++.+..+++.+ ..-+++...++++ |+.|. ++|+++.+++.+|+
T Consensus 178 ~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 178 RCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 7899999999999999887776642 3335788889999 99665 57999999999885
No 163
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.99 E-value=3.1e-05 Score=67.32 Aligned_cols=104 Identities=16% Similarity=0.244 Sum_probs=65.6
Q ss_pred CCcEEEecCCCCCccch-HhHHHHHHHHhhhCCcceEEEEeCCCCCcCC-----CCCCCCCCHHHHHHHHHHHHhCCCCC
Q 017180 90 SKNILMIPTISDVSTVE-EWRLVAQDIVQRVGKVNWRATIVDWPGLGYS-----DRPKMDYNADVMEKFVVDLINAPDSP 163 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~-~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S-----~~~~~~~~~~~~~~~l~~~l~~l~~~ 163 (376)
+..+||+||++ .+-. .-.+.++....... ....+.+-||--|.- ++....++...++..|..+.+...
T Consensus 116 k~vlvFvHGfN--ntf~dav~R~aqI~~d~g~--~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~-- 189 (377)
T COG4782 116 KTVLVFVHGFN--NTFEDAVYRTAQIVHDSGN--DGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKP-- 189 (377)
T ss_pred CeEEEEEcccC--CchhHHHHHHHHHHhhcCC--CcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCC--
Confidence 66889999998 4321 11223333333211 467888999976642 222234555555544554544443
Q ss_pred CCCCCCcEEEEecchHHHHHHHHHHh--------CCCCcceEEEeccC
Q 017180 164 VSSSESDLVIFGGGHAATLTVRAAKK--------NLVKPTAIAAVAPT 203 (376)
Q Consensus 164 ~~~~~~~~~lvG~S~Gg~ia~~~a~~--------~p~~v~~lvl~~p~ 203 (376)
.++++|++||||.++++....+ -+.+++-+||.+|.
T Consensus 190 ----~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 190 ----VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred ----CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 6789999999999999987662 34567888888884
No 164
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.94 E-value=0.00022 Score=65.87 Aligned_cols=43 Identities=21% Similarity=0.173 Sum_probs=37.0
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhccc-CCceEEEeCCC-CCCCC
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAK-GVTKFVEVPGA-LLPQE 354 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~-H~~~~ 354 (376)
+.|+|+|.|.+|..++++..+.+++.. ...+++++.++ |-+-.
T Consensus 304 k~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 304 KQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAI 348 (784)
T ss_pred CCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccC
Confidence 889999999999999999999987654 45789999999 98654
No 165
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.88 E-value=0.00088 Score=54.15 Aligned_cols=105 Identities=11% Similarity=0.017 Sum_probs=70.7
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+.-||||-|++.. -....-..+...|.+. +|.++-+-++-+- ..-...++.+-++||..++++++... ..
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~----~wslVq~q~~Ssy---~G~Gt~slk~D~edl~~l~~Hi~~~~--fS 106 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDEN----SWSLVQPQLRSSY---NGYGTFSLKDDVEDLKCLLEHIQLCG--FS 106 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhc----cceeeeeeccccc---cccccccccccHHHHHHHHHHhhccC--cc
Confidence 3468999998822 1233445666777775 8999998876321 00123456667889999999776211 13
Q ss_pred CcEEEEecchHHHHHHHHHH--hCCCCcceEEEeccC
Q 017180 169 SDLVIFGGGHAATLTVRAAK--KNLVKPTAIAAVAPT 203 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~--~~p~~v~~lvl~~p~ 203 (376)
..++|+|||.|+.=.+.|.. ..+..+.+.|+.+|.
T Consensus 107 t~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApV 143 (299)
T KOG4840|consen 107 TDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPV 143 (299)
T ss_pred cceEEEecCccchHHHHHHHhccchHHHHHHHHhCcc
Confidence 48999999999998888874 234467777777774
No 166
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.83 E-value=0.0002 Score=60.88 Aligned_cols=41 Identities=2% Similarity=0.073 Sum_probs=36.6
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCC
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYS 137 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S 137 (376)
|.|||-||++ ++...|..+...|+.+ ||-|.++..|-+..+
T Consensus 119 PvvvFSHGLg--gsRt~YSa~c~~LASh----G~VVaavEHRD~SA~ 159 (399)
T KOG3847|consen 119 PVVVFSHGLG--GSRTLYSAYCTSLASH----GFVVAAVEHRDRSAC 159 (399)
T ss_pred cEEEEecccc--cchhhHHHHhhhHhhC----ceEEEEeecccCcce
Confidence 6778889999 9999999999999998 999999999987544
No 167
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.80 E-value=8.7e-05 Score=67.87 Aligned_cols=86 Identities=8% Similarity=0.066 Sum_probs=61.0
Q ss_pred HhHHHHHHHHhhhCCcceE----EE--EeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHH
Q 017180 107 EWRLVAQDIVQRVGKVNWR----AT--IVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAA 180 (376)
Q Consensus 107 ~~~~~~~~L~~~~~~~~~~----Vi--~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg 180 (376)
.|..+++.|.+. ||. ++ -+|+|=-- ...+.+...|..+|+..... ..++++||||||||
T Consensus 66 ~~~~li~~L~~~----GY~~~~~l~~~pYDWR~~~--------~~~~~~~~~lk~~ie~~~~~---~~~kv~li~HSmGg 130 (389)
T PF02450_consen 66 YFAKLIENLEKL----GYDRGKDLFAAPYDWRLSP--------AERDEYFTKLKQLIEEAYKK---NGKKVVLIAHSMGG 130 (389)
T ss_pred hHHHHHHHHHhc----CcccCCEEEEEeechhhch--------hhHHHHHHHHHHHHHHHHHh---cCCcEEEEEeCCCc
Confidence 899999999875 544 22 26777211 13446666777776665311 26899999999999
Q ss_pred HHHHHHHHhCCC------CcceEEEeccCCCCC
Q 017180 181 TLTVRAAKKNLV------KPTAIAAVAPTWAGP 207 (376)
Q Consensus 181 ~ia~~~a~~~p~------~v~~lvl~~p~~~~~ 207 (376)
.++..+....+. .|+++|.+++++.|.
T Consensus 131 l~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 131 LVARYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred hHHHHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 999998886543 599999999876554
No 168
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.76 E-value=0.00043 Score=63.63 Aligned_cols=112 Identities=10% Similarity=0.015 Sum_probs=62.0
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC-cCCC-CCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL-GYSD-RPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~-G~S~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
-|.|+|+||-........+ ..++.|.+.....-.-|+.+|-.+- .++. -+....-.+.+.++|.-++++.- +....
T Consensus 209 ~PvlyllDG~~w~~~~~~~-~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y-~~~~d 286 (411)
T PRK10439 209 RPLAILLDGQFWAESMPVW-PALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIA-PFSDD 286 (411)
T ss_pred CCEEEEEECHHhhhcCCHH-HHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhC-CCCCC
Confidence 5777888995411222222 3444554431000134677775321 1111 11111111223344444554431 11112
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
.+..+|+|+||||..|+.++.++|+.+.+++..+|.
T Consensus 287 ~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 287 ADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred ccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 456889999999999999999999999999999984
No 169
>COG3150 Predicted esterase [General function prediction only]
Probab=97.68 E-value=0.00022 Score=54.95 Aligned_cols=87 Identities=16% Similarity=0.169 Sum_probs=61.6
Q ss_pred EEEecCCCCCccchHhHHHH--HHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCc
Q 017180 93 ILMIPTISDVSTVEEWRLVA--QDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESD 170 (376)
Q Consensus 93 vvllHG~~~~~~~~~~~~~~--~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 170 (376)
||+||||. ++......+. +.+.. |.|-.+.|. |.....+...++.+..++.+++ .+.
T Consensus 2 ilYlHGFn--SSP~shka~l~~q~~~~------------~~~~i~y~~-p~l~h~p~~a~~ele~~i~~~~------~~~ 60 (191)
T COG3150 2 ILYLHGFN--SSPGSHKAVLLLQFIDE------------DVRDIEYST-PHLPHDPQQALKELEKAVQELG------DES 60 (191)
T ss_pred eEEEecCC--CCcccHHHHHHHHHHhc------------cccceeeec-CCCCCCHHHHHHHHHHHHHHcC------CCC
Confidence 89999999 7776665432 22222 333333343 2344667888899999999987 666
Q ss_pred EEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 171 LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
..|||.|+||..|..++.++-- +-|+++|.
T Consensus 61 p~ivGssLGGY~At~l~~~~Gi---rav~~NPa 90 (191)
T COG3150 61 PLIVGSSLGGYYATWLGFLCGI---RAVVFNPA 90 (191)
T ss_pred ceEEeecchHHHHHHHHHHhCC---hhhhcCCC
Confidence 8999999999999999998643 34667774
No 170
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.64 E-value=0.00027 Score=51.37 Aligned_cols=61 Identities=18% Similarity=0.174 Sum_probs=53.5
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
..|+|+|.++.|+..|.+..+.+.+.+++++++.+++. |..+...-.-+.+.+.+||.+-.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G~ 95 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDGT 95 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHcCC
Confidence 57999999999999999999999999999999999998 99876444557888999998653
No 171
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.62 E-value=0.00032 Score=61.69 Aligned_cols=68 Identities=22% Similarity=0.297 Sum_probs=50.3
Q ss_pred HHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccC--CceEEEeCCC-CCCCCCChH---HHHHHHHHHHHhhc
Q 017180 304 QLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG--VTKFVEVPGA-LLPQEEYPA---MVAQELYQFLQQTF 372 (376)
Q Consensus 304 ~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~-H~~~~e~pe---~~~~~i~~fl~~~~ 372 (376)
..+.++. .+|+|+++|++|..+|....+.+..... +.+...++++ |......+. +....+.+|+.+.+
T Consensus 225 ~~~~~i~-~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 225 DDAEKIS-PRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred hhHhhcC-CcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 3445551 2799999999999999888887754333 4677888888 997754433 68888999998764
No 172
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.55 E-value=0.00019 Score=68.27 Aligned_cols=107 Identities=13% Similarity=0.091 Sum_probs=62.3
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHh------------hhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQ------------RVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLI 157 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~------------~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l 157 (376)
|-||+||+|.. ++..+-+.++..... ......|+.+++|+-+= = ..-...+..+.++-+.+.|
T Consensus 89 GIPVLFIPGNA--GSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe--~-tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 89 GIPVLFIPGNA--GSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE--F-TAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred CceEEEecCCC--CchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch--h-hhhccHhHHHHHHHHHHHH
Confidence 77999999999 888888777665552 01112466777776430 0 0012334555555555444
Q ss_pred hCC----CC---CCCCCCCcEEEEecchHHHHHHHHHH---hCCCCcceEEEec
Q 017180 158 NAP----DS---PVSSSESDLVIFGGGHAATLTVRAAK---KNLVKPTAIAAVA 201 (376)
Q Consensus 158 ~~l----~~---~~~~~~~~~~lvG~S~Gg~ia~~~a~---~~p~~v~~lvl~~ 201 (376)
+.. .. ........|++|||||||.+|...+. ..+..|.-++..+
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITls 217 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLS 217 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhc
Confidence 322 11 11122556999999999999987665 2344455555443
No 173
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.53 E-value=0.00024 Score=67.62 Aligned_cols=107 Identities=8% Similarity=-0.017 Sum_probs=65.8
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCC----CCcCCCCC--CCCCCHHHHHHHHHHH---HhC
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWP----GLGYSDRP--KMDYNADVMEKFVVDL---INA 159 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~----G~G~S~~~--~~~~~~~~~~~~l~~~---l~~ 159 (376)
.|.||+|||.+.. ++...+ ....|....+ ++-|+.+++| |++.+... .....+.+....+..+ ++.
T Consensus 95 ~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~--~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 95 LPVMVWIHGGGFMFGSGSLY--PGDGLAREGD--NVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCEEEEEcCCccccCCCCCC--ChHHHHhcCC--CEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 6889999996522 122222 2344544311 3999999999 34333211 1234445554444433 444
Q ss_pred CCCCCCCCCCcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccCC
Q 017180 160 PDSPVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPTW 204 (376)
Q Consensus 160 l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~~ 204 (376)
.+ +...+|.|+|+|.||..+..++.. .+..++++|+.++..
T Consensus 171 fg----gd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 171 FG----GDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred hC----CCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 44 346789999999999999888774 345688889887643
No 174
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.51 E-value=0.012 Score=49.41 Aligned_cols=102 Identities=7% Similarity=-0.044 Sum_probs=70.2
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCc
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESD 170 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 170 (376)
.|+|++||+++..+......+.+.+.+ +. |..|+++|. |-| .+...-....+.++...+.++... ...+-
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~-~~--g~~v~~lei-g~g--~~~s~l~pl~~Qv~~~ce~v~~m~----~lsqG 93 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEE-LP--GSPVYCLEI-GDG--IKDSSLMPLWEQVDVACEKVKQMP----ELSQG 93 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHh-CC--CCeeEEEEe-cCC--cchhhhccHHHHHHHHHHHHhcch----hccCc
Confidence 579999999955444558888888887 33 899999986 333 111223345566666666665432 12456
Q ss_pred EEEEecchHHHHHHHHHHhCCC-CcceEEEecc
Q 017180 171 LVIFGGGHAATLTVRAAKKNLV-KPTAIAAVAP 202 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~p 202 (376)
+.++|.|-||.++-.++...++ .|..+|.+++
T Consensus 94 ynivg~SQGglv~Raliq~cd~ppV~n~ISL~g 126 (296)
T KOG2541|consen 94 YNIVGYSQGGLVARALIQFCDNPPVKNFISLGG 126 (296)
T ss_pred eEEEEEccccHHHHHHHHhCCCCCcceeEeccC
Confidence 9999999999999999995443 4778888765
No 175
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.44 E-value=0.00049 Score=63.79 Aligned_cols=124 Identities=17% Similarity=0.084 Sum_probs=82.6
Q ss_pred cCCceeEEEEecccC-CCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC--------CC
Q 017180 71 KENSINIYYEKHERE-SPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR--------PK 141 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~-~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~--------~~ 141 (376)
..||.+|.|...+.+ ..++.|++|+--|.....-.-.|...+...-++ |.-.+.-..||=|+=.+ .+
T Consensus 401 SkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLer----Gg~~v~ANIRGGGEfGp~WH~Aa~k~n 476 (648)
T COG1505 401 SKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLER----GGVFVLANIRGGGEFGPEWHQAGMKEN 476 (648)
T ss_pred cCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhc----CCeEEEEecccCCccCHHHHHHHhhhc
Confidence 557999988777522 112367776664433122233454555555554 77778889999876531 12
Q ss_pred CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 142 MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 142 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
.....+++.+...++++.-. ...+++.+.|.|=||.+.-....++|+.+.++|.-.|
T Consensus 477 rq~vfdDf~AVaedLi~rgi----tspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evP 533 (648)
T COG1505 477 KQNVFDDFIAVAEDLIKRGI----TSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVP 533 (648)
T ss_pred chhhhHHHHHHHHHHHHhCC----CCHHHhhhccCCCCceEEEeeeccChhhhCceeeccc
Confidence 34556677777777776643 2356789999999999998888899999998887776
No 176
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.44 E-value=0.00078 Score=59.61 Aligned_cols=105 Identities=13% Similarity=0.044 Sum_probs=76.2
Q ss_pred CcEEEecCCCCCccchHhHH---HHHHHHhhhCCcceEEEEeCCCCCcCCCCCC----------CCCCHHHHHHHHHHHH
Q 017180 91 KNILMIPTISDVSTVEEWRL---VAQDIVQRVGKVNWRATIVDWPGLGYSDRPK----------MDYNADVMEKFVVDLI 157 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~---~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~----------~~~~~~~~~~~l~~~l 157 (376)
-||+|--|.- ++.+.|.. ++..++.+ .+.-+|-...|=||+|-+-. .-.+.++-.+|...++
T Consensus 81 gPIffYtGNE--Gdie~Fa~ntGFm~D~Ap~---~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll 155 (492)
T KOG2183|consen 81 GPIFFYTGNE--GDIEWFANNTGFMWDLAPE---LKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELL 155 (492)
T ss_pred CceEEEeCCc--ccHHHHHhccchHHhhhHh---hCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHH
Confidence 4699999988 76666543 23334432 26789999999999996321 2356677777777777
Q ss_pred hCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEe
Q 017180 158 NAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAV 200 (376)
Q Consensus 158 ~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~ 200 (376)
..+.........+|+++|.|.||+++.-+=.++|..|.+....
T Consensus 156 ~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAa 198 (492)
T KOG2183|consen 156 TFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAA 198 (492)
T ss_pred HHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhc
Confidence 7776433334678999999999999999999999987775544
No 177
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.41 E-value=0.015 Score=52.18 Aligned_cols=33 Identities=15% Similarity=0.060 Sum_probs=28.9
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEec
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVA 201 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~ 201 (376)
-|++++|+|.||.+|...|.-.|-.+++++=-+
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns 216 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNS 216 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecC
Confidence 489999999999999999999999888776444
No 178
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.40 E-value=0.077 Score=49.27 Aligned_cols=58 Identities=9% Similarity=0.021 Sum_probs=44.3
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhccc------------------------CC-ceEEEeCCC-CCCCCCChHHHHHHHH
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAK------------------------GV-TKFVEVPGA-LLPQEEYPAMVAQELY 365 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~------------------------~~-~~~~~~~~~-H~~~~e~pe~~~~~i~ 365 (376)
..+|||..|+.|.+|+.-..+.+.+.+ .+ .+++.+.++ |++. .+|+...+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 469999999999988865555432111 22 677888888 9986 58999999999
Q ss_pred HHHHh
Q 017180 366 QFLQQ 370 (376)
Q Consensus 366 ~fl~~ 370 (376)
.|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99965
No 179
>PLN02209 serine carboxypeptidase
Probab=97.36 E-value=0.027 Score=52.24 Aligned_cols=58 Identities=12% Similarity=0.099 Sum_probs=44.8
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhcc------------------------cCC-ceEEEeCCC-CCCCCCChHHHHHHHH
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGA------------------------KGV-TKFVEVPGA-LLPQEEYPAMVAQELY 365 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~------------------------~~~-~~~~~~~~~-H~~~~e~pe~~~~~i~ 365 (376)
.++||+..|+.|.+|+.-..+.+... ..+ .+++.+.++ |++. .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 46999999999998886555544211 133 678888888 9985 59999999999
Q ss_pred HHHHh
Q 017180 366 QFLQQ 370 (376)
Q Consensus 366 ~fl~~ 370 (376)
.|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
No 180
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.22 E-value=0.00046 Score=58.85 Aligned_cols=108 Identities=6% Similarity=-0.028 Sum_probs=57.5
Q ss_pred CCcEEEecCCCCCc-cchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDVS-TVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~~-~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
..|||+.||+|+.. +...+..+...+.+... |--|..+++-.-..++ ....-..+.+.++.+.+.++.... .
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~P--G~yV~si~ig~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~----L 78 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHP--GTYVHSIEIGNDPSEDVENSFFGNVNDQVEQVCEQLANDPE----L 78 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHST--T--EEE--SSSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GG----G
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCC--CceEEEEEECCCcchhhhhhHHHHHHHHHHHHHHHHhhChh----h
Confidence 45899999999432 23356665555555433 7788888873222112 111123345555555555544210 1
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCC-CcceEEEeccC
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLV-KPTAIAAVAPT 203 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~p~ 203 (376)
..-++++|+|-||.++-.++.+++. .|+.+|.+++.
T Consensus 79 ~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 79 ANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp TT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred hcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 2459999999999999999998864 58999988753
No 181
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.06 E-value=0.0095 Score=50.27 Aligned_cols=37 Identities=11% Similarity=0.047 Sum_probs=33.8
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
..++-.++|||+||.+++.....+|+.+...++++|.
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 3556899999999999999999999999999999994
No 182
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.02 E-value=0.011 Score=50.61 Aligned_cols=125 Identities=8% Similarity=0.017 Sum_probs=69.7
Q ss_pred eeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHHH
Q 017180 75 INIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKFV 153 (376)
Q Consensus 75 ~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~l 153 (376)
..+.|...|.....+-|.++++||-....+...++-+-..+.+. .-..--+|.+|.-- .. +....+..+++.+.|
T Consensus 83 ~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g-~i~pai~vgid~~d---~~~R~~~~~~n~~~~~~L 158 (299)
T COG2382 83 RRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAG-EIPPAILVGIDYID---VKKRREELHCNEAYWRFL 158 (299)
T ss_pred eEEEEeCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcC-CCCCceEEecCCCC---HHHHHHHhcccHHHHHHH
Confidence 34566666654444457788889954224445554433333331 11135566666532 11 111122333333333
Q ss_pred H-HHHhCCCCCCC--CCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 154 V-DLINAPDSPVS--SSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 154 ~-~~l~~l~~~~~--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
. +++-.+...+. .....-+|+|.|+||.+++..+..+|+.+-.++..+|.
T Consensus 159 ~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps 211 (299)
T COG2382 159 AQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGS 211 (299)
T ss_pred HHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCc
Confidence 2 33322221110 11344688999999999999999999999999999885
No 183
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=96.99 E-value=0.019 Score=51.58 Aligned_cols=62 Identities=16% Similarity=0.091 Sum_probs=49.5
Q ss_pred HhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccC-CceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 306 FADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG-VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 306 ~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
..++ .+|.++|.|..|.+..+.....+...+| ...+..+|++ |.... ..+.+.|..|+....
T Consensus 258 ~~rL--~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~~ 321 (367)
T PF10142_consen 258 RDRL--TMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNRIQ 321 (367)
T ss_pred HHhc--CccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHHHH
Confidence 3566 8899999999999887777777765555 5678899999 99766 567888999988753
No 184
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.94 E-value=0.0023 Score=58.43 Aligned_cols=106 Identities=13% Similarity=0.031 Sum_probs=65.9
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcc-eEEEEeCCCC--CcCCC--------CCCCCCCHHHHHHHH---H
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVN-WRATIVDWPG--LGYSD--------RPKMDYNADVMEKFV---V 154 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~-~~Vi~~D~~G--~G~S~--------~~~~~~~~~~~~~~l---~ 154 (376)
.|++|+|||.+.. ++...-..--..|+++ | +-|+.+++|= +|.=+ .......+.+....| .
T Consensus 94 ~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~----g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~ 169 (491)
T COG2272 94 LPVMVYIHGGGYIMGSGSEPLYDGSALAAR----GDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVR 169 (491)
T ss_pred CcEEEEEeccccccCCCcccccChHHHHhc----CCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHH
Confidence 6899999996633 2333322334567765 5 8888888772 22211 111123444544443 4
Q ss_pred HHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH--hCCCCcceEEEeccC
Q 017180 155 DLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK--KNLVKPTAIAAVAPT 203 (376)
Q Consensus 155 ~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~--~~p~~v~~lvl~~p~ 203 (376)
+-|++.| ...+.|.|+|+|-|++.++.+.+ .....++++|+.++.
T Consensus 170 ~NIe~FG----GDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~ 216 (491)
T COG2272 170 DNIEAFG----GDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGA 216 (491)
T ss_pred HHHHHhC----CCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCC
Confidence 5567776 34678999999999998887765 233457778888874
No 185
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.81 E-value=0.12 Score=47.73 Aligned_cols=122 Identities=12% Similarity=0.040 Sum_probs=73.0
Q ss_pred EEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhC--------------CcceEEEEeC-CCCCcCCC--C
Q 017180 77 IYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVG--------------KVNWRATIVD-WPGLGYSD--R 139 (376)
Q Consensus 77 l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~--------------~~~~~Vi~~D-~~G~G~S~--~ 139 (376)
.+|.-.++..+...|.|+.+.|.+ +++..|-.+.+.=..+.+ ...-.++-+| .-|-|.|. .
T Consensus 88 ffy~fe~~ndp~~rPvi~wlNGGP--GcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~ 165 (498)
T COG2939 88 FFYTFESPNDPANRPVIFWLNGGP--GCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALG 165 (498)
T ss_pred EEEEecCCCCCCCCceEEEecCCC--ChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccc
Confidence 355555544444478899999999 877777554321100000 0024688999 66888887 3
Q ss_pred CCCCCCHHHHHHHHHHHHh-------CCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCC---CcceEEEeccCC
Q 017180 140 PKMDYNADVMEKFVVDLIN-------APDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV---KPTAIAAVAPTW 204 (376)
Q Consensus 140 ~~~~~~~~~~~~~l~~~l~-------~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~p~~ 204 (376)
....-+.....+|+..+.+ +.. ....+.+|+|-|.||..+..+|..-.+ ..++++++.+..
T Consensus 166 ~e~~~d~~~~~~D~~~~~~~f~~~fp~~~----r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 166 DEKKKDFEGAGKDVYSFLRLFFDKFPHYA----RLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred cccccchhccchhHHHHHHHHHHHHHHHh----hhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 3333444444555544332 222 124589999999999999998884222 356777765543
No 186
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.80 E-value=0.0068 Score=58.39 Aligned_cols=107 Identities=9% Similarity=-0.093 Sum_probs=61.9
Q ss_pred CCcEEEecCCCCCccch--HhHHHHHHHHhhhCCcceEEEEeCCCC----CcCCCC---CCCCCCHHHHHHHHH---HHH
Q 017180 90 SKNILMIPTISDVSTVE--EWRLVAQDIVQRVGKVNWRATIVDWPG----LGYSDR---PKMDYNADVMEKFVV---DLI 157 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~--~~~~~~~~L~~~~~~~~~~Vi~~D~~G----~G~S~~---~~~~~~~~~~~~~l~---~~l 157 (376)
-|++|+|||.+....+. ....-...+.+. +.=||.+.||= |-.+.. +...+.+.|+...|. +-|
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~----~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI 200 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASK----DVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNI 200 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHH----TSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHG
T ss_pred cceEEEeecccccCCCcccccccccccccCC----CEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhh
Confidence 48899999966332222 222233444454 89999999883 222221 113455556555555 345
Q ss_pred hCCCCCCCCCCCcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccCC
Q 017180 158 NAPDSPVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPTW 204 (376)
Q Consensus 158 ~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~~ 204 (376)
...| +..++|.|+|||.||..+..+... ....+++.|+.++..
T Consensus 201 ~~FG----GDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 201 AAFG----GDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp GGGT----EEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hhcc----cCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 5565 335679999999999999887773 345799999998753
No 187
>KOG3101 consensus Esterase D [General function prediction only]
Probab=96.70 E-value=0.025 Score=45.66 Aligned_cols=109 Identities=17% Similarity=0.171 Sum_probs=64.4
Q ss_pred CCcEEEecCCCCCccchHhHH--HHHHHHhhhCCcceEEEEeCC--CCC---cCCCCCC--------CCCCHHHHHH---
Q 017180 90 SKNILMIPTISDVSTVEEWRL--VAQDIVQRVGKVNWRATIVDW--PGL---GYSDRPK--------MDYNADVMEK--- 151 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~--~~~~L~~~~~~~~~~Vi~~D~--~G~---G~S~~~~--------~~~~~~~~~~--- 151 (376)
-|++.++-|+. .+...|-. -.+..+.. .|+-|+++|- ||. |+++.-+ ...+.|-|++
T Consensus 44 ~P~lf~LSGLT--CT~~Nfi~Ksg~qq~As~---hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yr 118 (283)
T KOG3101|consen 44 CPVLFYLSGLT--CTHENFIEKSGFQQQASK---HGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYR 118 (283)
T ss_pred CceEEEecCCc--ccchhhHhhhhHHHhHhh---cCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhh
Confidence 47788889998 77665522 22222222 2899999994 553 2222000 1122222222
Q ss_pred ----HHHHHHhCCC-CCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 152 ----FVVDLINAPD-SPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 152 ----~l~~~l~~l~-~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
...++.+.+. ....+...++.+.||||||.=|+..+.++|.+.+++-..+|.
T Consensus 119 MYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI 175 (283)
T KOG3101|consen 119 MYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPI 175 (283)
T ss_pred HHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccc
Confidence 1223333332 111223556899999999999999999999998888777763
No 188
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=96.65 E-value=0.56 Score=43.55 Aligned_cols=126 Identities=16% Similarity=0.119 Sum_probs=72.6
Q ss_pred CceeEEEEecccC-CCCCCCcEEEecCCCCCccchHhHHHHHHHHh----hhC----------CcceEEEEeCCC-CCcC
Q 017180 73 NSINIYYEKHERE-SPDPSKNILMIPTISDVSTVEEWRLVAQDIVQ----RVG----------KVNWRATIVDWP-GLGY 136 (376)
Q Consensus 73 ~g~~l~y~~~g~~-~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~----~~~----------~~~~~Vi~~D~~-G~G~ 136 (376)
.+..++|.-.... +++.+|.||.+-|.+ +++..- -++.++.- ..| +.-.+++-+|.| |-|.
T Consensus 55 ~~~~LFYwf~eS~~~P~~dPlvLWLnGGP--GCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGF 131 (454)
T KOG1282|consen 55 EGRQLFYWFFESENNPETDPLVLWLNGGP--GCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGF 131 (454)
T ss_pred CCceEEEEEEEccCCCCCCCEEEEeCCCC--Cccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCc
Confidence 3677887655442 334478999999999 554332 22222210 000 002568888866 6777
Q ss_pred CC-CCCC--CCCHHHHHHHHHHHH----hCCCCCCCCCCCcEEEEecchHHHHHHHHHH----hC------CCCcceEEE
Q 017180 137 SD-RPKM--DYNADVMEKFVVDLI----NAPDSPVSSSESDLVIFGGGHAATLTVRAAK----KN------LVKPTAIAA 199 (376)
Q Consensus 137 S~-~~~~--~~~~~~~~~~l~~~l----~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~----~~------p~~v~~lvl 199 (376)
|= .... ..+-+..++|+..++ ++.-+ ...++++|.|-|.+|...-.+|. .. +..++++++
T Consensus 132 SYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPe---y~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~I 208 (454)
T KOG1282|consen 132 SYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPE---YKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAI 208 (454)
T ss_pred cccCCCCcCcCCcHHHHHHHHHHHHHHHHhChh---hcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEe
Confidence 64 2111 223344555555444 43321 13678999999999987777766 21 245788888
Q ss_pred eccCC
Q 017180 200 VAPTW 204 (376)
Q Consensus 200 ~~p~~ 204 (376)
-+|..
T Consensus 209 GNg~t 213 (454)
T KOG1282|consen 209 GNGLT 213 (454)
T ss_pred cCccc
Confidence 77743
No 189
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.62 E-value=0.0036 Score=48.32 Aligned_cols=37 Identities=22% Similarity=0.259 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh
Q 017180 147 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
+...+.+..++++.. ..++++.|||+||.+|..++..
T Consensus 48 ~~~~~~l~~~~~~~~------~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 48 DQILDALKELVEKYP------DYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHST------TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccc------CccchhhccchHHHHHHHHHHh
Confidence 344556666666654 5789999999999999998883
No 190
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.59 E-value=0.0059 Score=48.00 Aligned_cols=35 Identities=11% Similarity=0.095 Sum_probs=27.3
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCC----CcceEEEecc
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLV----KPTAIAAVAP 202 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~----~v~~lvl~~p 202 (376)
..+++++|||+||.+|..++..... .+..++..++
T Consensus 27 ~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~ 65 (153)
T cd00741 27 DYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGP 65 (153)
T ss_pred CCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCC
Confidence 6789999999999999999886543 4555666655
No 191
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.48 E-value=0.0043 Score=56.27 Aligned_cols=88 Identities=10% Similarity=0.161 Sum_probs=55.1
Q ss_pred hHhHHHHHHHHhhhCCcceE------EEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchH
Q 017180 106 EEWRLVAQDIVQRVGKVNWR------ATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHA 179 (376)
Q Consensus 106 ~~~~~~~~~L~~~~~~~~~~------Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~G 179 (376)
..|..+++.|..- ||. -..+|+|=.= ......+..+..+..-++...+.-+ ++|++|++||||
T Consensus 124 ~~w~~~i~~lv~~----GYe~~~~l~ga~YDwRls~-~~~e~rd~yl~kLK~~iE~~~~~~G------~kkVvlisHSMG 192 (473)
T KOG2369|consen 124 WYWHELIENLVGI----GYERGKTLFGAPYDWRLSY-HNSEERDQYLSKLKKKIETMYKLNG------GKKVVLISHSMG 192 (473)
T ss_pred HHHHHHHHHHHhh----CcccCceeeccccchhhcc-CChhHHHHHHHHHHHHHHHHHHHcC------CCceEEEecCCc
Confidence 4899999999885 776 4557877311 1111122233333333333333333 599999999999
Q ss_pred HHHHHHHHHhCCC--------CcceEEEeccCC
Q 017180 180 ATLTVRAAKKNLV--------KPTAIAAVAPTW 204 (376)
Q Consensus 180 g~ia~~~a~~~p~--------~v~~lvl~~p~~ 204 (376)
+.+.+.+...+++ .+++.+-++..+
T Consensus 193 ~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 193 GLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred cHHHHHHHhcccccchhHHHHHHHHHHccCchh
Confidence 9999999987766 255555555444
No 192
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.46 E-value=0.015 Score=53.17 Aligned_cols=108 Identities=16% Similarity=0.134 Sum_probs=75.8
Q ss_pred CCcEEEecCCCCCccchHhH----HHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-------CCCCHHHHHHHHHHHHh
Q 017180 90 SKNILMIPTISDVSTVEEWR----LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-------MDYNADVMEKFVVDLIN 158 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~----~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-------~~~~~~~~~~~l~~~l~ 158 (376)
+|.-|+|-|=+ .....|- .....++++. |-.|+-+.+|=||.|.+.. .-.+.++...|+..||+
T Consensus 86 gPiFLmIGGEg--p~~~~wv~~~~~~~~~~Akkf---gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~ 160 (514)
T KOG2182|consen 86 GPIFLMIGGEG--PESDKWVGNENLTWLQWAKKF---GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIK 160 (514)
T ss_pred CceEEEEcCCC--CCCCCccccCcchHHHHHHHh---CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHH
Confidence 56667776655 3333331 1223333321 7899999999999986322 24577888899999999
Q ss_pred CCCCCCCCCC-CcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 159 APDSPVSSSE-SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 159 ~l~~~~~~~~-~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
+++....... .+++.+|.|.-|.++.-+=+.+|+.+.+-|.-+.
T Consensus 161 ~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSa 205 (514)
T KOG2182|consen 161 AMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSA 205 (514)
T ss_pred HHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccc
Confidence 8864332222 3899999999999999999999999888776543
No 193
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.45 E-value=0.013 Score=48.86 Aligned_cols=105 Identities=9% Similarity=0.047 Sum_probs=59.0
Q ss_pred CCcEEEecCCC-CCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTIS-DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~-~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.-.|-|+-|.. +..-.-.|+.+.+.|+++ ||.|++.-+. .|.-.......-.+.+...+..+.+..+... ..
T Consensus 17 ~gvihFiGGaf~ga~P~itYr~lLe~La~~----Gy~ViAtPy~-~tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~--~~ 89 (250)
T PF07082_consen 17 KGVIHFIGGAFVGAAPQITYRYLLERLADR----GYAVIATPYV-VTFDHQAIAREVWERFERCLRALQKRGGLDP--AY 89 (250)
T ss_pred CEEEEEcCcceeccCcHHHHHHHHHHHHhC----CcEEEEEecC-CCCcHHHHHHHHHHHHHHHHHHHHHhcCCCc--cc
Confidence 33566666633 123345788999999997 9999997664 1211000000011112222222222221110 12
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEec
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVA 201 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~ 201 (376)
-+++-+|||+|+.+-+.+...+...-++.|+++
T Consensus 90 lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred CCeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 467889999999999998877665556777775
No 194
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=96.41 E-value=0.072 Score=50.34 Aligned_cols=106 Identities=18% Similarity=0.132 Sum_probs=71.9
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC---C-----CCCCCHHHHHHHHHHHHhCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR---P-----KMDYNADVMEKFVVDLINAPD 161 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~---~-----~~~~~~~~~~~~l~~~l~~l~ 161 (376)
+|.+|..||.-+.+-.-.|+.--..|.++ |+-....|.||=|+-.. . ....+++++..-.+-+++.--
T Consensus 470 ~P~LLygYGay~isl~p~f~~srl~lld~----G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gy 545 (712)
T KOG2237|consen 470 KPLLLYGYGAYGISLDPSFRASRLSLLDR----GWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGY 545 (712)
T ss_pred CceEEEEecccceeeccccccceeEEEec----ceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCC
Confidence 45555556533222223454333334444 88888889999775431 1 135567777777777776542
Q ss_pred CCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 162 SPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 162 ~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
....+..+.|.|-||.++..+..++|+++.++|+-.|.
T Consensus 546 ----t~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpf 583 (712)
T KOG2237|consen 546 ----TQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPF 583 (712)
T ss_pred ----CCccceeEecccCccchhHHHhccCchHhhhhhhcCcc
Confidence 34678999999999999999999999999999988774
No 195
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.30 E-value=0.0043 Score=58.23 Aligned_cols=93 Identities=10% Similarity=0.027 Sum_probs=56.1
Q ss_pred hHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC--CCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHH
Q 017180 106 EEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR--PKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLT 183 (376)
Q Consensus 106 ~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia 183 (376)
..|..+++.|.+. ||. -.|+.|...-=+ +......+.+-..|..+|+..-... ..++++|+||||||.++
T Consensus 156 ~vw~kLIe~L~~i----GY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~ 227 (642)
T PLN02517 156 FVWAVLIANLARI----GYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYF 227 (642)
T ss_pred eeHHHHHHHHHHc----CCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHH
Confidence 3678999999986 775 334433322110 1111122445555666655431000 26899999999999999
Q ss_pred HHHHHhC-----------C----CCcceEEEeccCCCC
Q 017180 184 VRAAKKN-----------L----VKPTAIAAVAPTWAG 206 (376)
Q Consensus 184 ~~~a~~~-----------p----~~v~~lvl~~p~~~~ 206 (376)
+.+...- + ..|++.|.+++.+.+
T Consensus 228 lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 228 LHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 9876521 1 247889999887644
No 196
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.15 E-value=0.13 Score=48.98 Aligned_cols=106 Identities=16% Similarity=0.105 Sum_probs=72.4
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC--------CCCCCCHHHHHHHHHHHHhCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR--------PKMDYNADVMEKFVVDLINAPD 161 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~--------~~~~~~~~~~~~~l~~~l~~l~ 161 (376)
+|.+|.--|.-+.+..-.|....-.|.++ |+---+.--||=|+=.. -....|+.++.+....++++--
T Consensus 448 ~p~lLygYGaYG~s~~p~Fs~~~lSLlDR----GfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~ 523 (682)
T COG1770 448 APLLLYGYGAYGISMDPSFSIARLSLLDR----GFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGY 523 (682)
T ss_pred CcEEEEEeccccccCCcCcccceeeeecC----ceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCc
Confidence 55555555533222233444444455555 77666666777665321 1246788888888888877643
Q ss_pred CCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 162 SPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 162 ~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
...+.++++|.|.||++.-..+.+.|+.++++|+-.|+
T Consensus 524 ----~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPF 561 (682)
T COG1770 524 ----TSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPF 561 (682)
T ss_pred ----CCccceEEeccCchhHHHHHHHhhChhhhhheeecCCc
Confidence 13457999999999999999999999999999998884
No 197
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.04 E-value=0.065 Score=43.36 Aligned_cols=104 Identities=13% Similarity=0.136 Sum_probs=60.1
Q ss_pred CCcEEEecCCCCCccchHhHH-H-----------HHHHHhhhCCcceEEEEeCCC---CCcCCC-CCC-CCCCHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRL-V-----------AQDIVQRVGKVNWRATIVDWP---GLGYSD-RPK-MDYNADVMEKF 152 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~-~-----------~~~L~~~~~~~~~~Vi~~D~~---G~G~S~-~~~-~~~~~~~~~~~ 152 (376)
...+|||||.|.+ -..+|.+ + ++.+.+ ..+.||.|++..-- -+-.+. .|. ...+..+.+.-
T Consensus 101 ~kLlVLIHGSGvV-rAGQWARrLIIN~~Ld~GTQiPyi~r-Av~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 101 QKLLVLIHGSGVV-RAGQWARRLIINEDLDSGTQIPYIKR-AVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred cceEEEEecCceE-ecchHhhhhhhccccccCCcChHHHH-HHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 4579999998733 2345532 1 122211 11229999998653 122222 222 12244444443
Q ss_pred HH-HHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCC--cceEEEec
Q 017180 153 VV-DLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVK--PTAIAAVA 201 (376)
Q Consensus 153 l~-~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~--v~~lvl~~ 201 (376)
+. .++.-.. ...+.+|.||.||...+.+..+.|+. |.++.+.+
T Consensus 179 vw~~~v~pa~------~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTD 224 (297)
T KOG3967|consen 179 VWKNIVLPAK------AESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTD 224 (297)
T ss_pred HHHHHhcccC------cceEEEEEeccCChhHHHHHHhcCCccceEEEEeec
Confidence 33 4444443 67899999999999999999988754 55555544
No 198
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=96.03 E-value=0.013 Score=42.88 Aligned_cols=39 Identities=13% Similarity=0.271 Sum_probs=22.9
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHH
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVA 112 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~ 112 (376)
..+|++||+...-+..++ ..||||+|||+ ++-..|..++
T Consensus 74 ~I~g~~iHFih~rs~~~~-aiPLll~HGWP--gSf~Ef~~vI 112 (112)
T PF06441_consen 74 EIDGLDIHFIHVRSKRPN-AIPLLLLHGWP--GSFLEFLKVI 112 (112)
T ss_dssp EETTEEEEEEEE--S-TT--EEEEEE--SS----GGGGHHHH
T ss_pred EEeeEEEEEEEeeCCCCC-CeEEEEECCCC--ccHHhHHhhC
Confidence 345999998765543321 57899999999 9888887653
No 199
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.83 E-value=0.015 Score=49.19 Aligned_cols=35 Identities=14% Similarity=0.088 Sum_probs=25.4
Q ss_pred CCcEEEEecchHHHHHHHHHHhC-----CCCcceEEEecc
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKN-----LVKPTAIAAVAP 202 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~~p 202 (376)
..++++.|||+||.+|..++... +..+..+..-+|
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P 166 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQP 166 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCC
Confidence 67899999999999999988842 334554444444
No 200
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=95.74 E-value=0.018 Score=51.14 Aligned_cols=89 Identities=11% Similarity=0.001 Sum_probs=65.4
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
...-||+-|=| +....=+.+...|.++ |+.|+.+|-.=|=.|+ .+.++.++|+..+++....++ ...
T Consensus 260 d~~av~~SGDG--GWr~lDk~v~~~l~~~----gvpVvGvdsLRYfW~~-----rtPe~~a~Dl~r~i~~y~~~w--~~~ 326 (456)
T COG3946 260 DTVAVFYSGDG--GWRDLDKEVAEALQKQ----GVPVVGVDSLRYFWSE-----RTPEQIAADLSRLIRFYARRW--GAK 326 (456)
T ss_pred ceEEEEEecCC--chhhhhHHHHHHHHHC----CCceeeeehhhhhhcc-----CCHHHHHHHHHHHHHHHHHhh--Ccc
Confidence 34557777766 6555556777888876 9999999955454554 457889999999988776443 367
Q ss_pred cEEEEecchHHHHHHHHHHhCC
Q 017180 170 DLVIFGGGHAATLTVRAAKKNL 191 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p 191 (376)
+++|+|+|+|+-+.-....+-|
T Consensus 327 ~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 327 RVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred eEEEEeecccchhhHHHHHhCC
Confidence 8999999999988766555433
No 201
>COG0627 Predicted esterase [General function prediction only]
Probab=95.69 E-value=0.017 Score=50.94 Aligned_cols=34 Identities=12% Similarity=0.028 Sum_probs=31.5
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
.-.++||||||.=|+.+|.++|+++..+...+|.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~ 186 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGI 186 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceecccccc
Confidence 6789999999999999999999999999988874
No 202
>PLN02454 triacylglycerol lipase
Probab=95.67 E-value=0.025 Score=51.25 Aligned_cols=19 Identities=32% Similarity=0.340 Sum_probs=17.6
Q ss_pred cEEEEecchHHHHHHHHHH
Q 017180 170 DLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~ 188 (376)
++++.|||+||.+|+.+|.
T Consensus 229 sI~vTGHSLGGALAtLaA~ 247 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAF 247 (414)
T ss_pred eEEEEecCHHHHHHHHHHH
Confidence 4999999999999999986
No 203
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.57 E-value=0.034 Score=46.59 Aligned_cols=46 Identities=9% Similarity=0.104 Sum_probs=33.8
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhC----CCCcceEEEecc
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKN----LVKPTAIAAVAP 202 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~----p~~v~~lvl~~p 202 (376)
.+-+..+++.. ..++++.|||.||.+|..+|... .++|.++...++
T Consensus 72 ~~yl~~~~~~~-------~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDg 121 (224)
T PF11187_consen 72 LAYLKKIAKKY-------PGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHhC-------CCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeC
Confidence 34455566655 34699999999999999998863 356778877665
No 204
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.53 E-value=0.029 Score=45.89 Aligned_cols=63 Identities=6% Similarity=0.012 Sum_probs=46.6
Q ss_pred ceEEEEeCCCCCcCCC-C----C----CCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhC
Q 017180 123 NWRATIVDWPGLGYSD-R----P----KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKN 190 (376)
Q Consensus 123 ~~~Vi~~D~~G~G~S~-~----~----~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~ 190 (376)
-.+|++|=||--.... . . .......+..+....+|++.+ .+++++|+|||-|+.++.++..+.
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n-----~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN-----NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC-----CCCCEEEEEeChHHHHHHHHHHHH
Confidence 5899999888654322 1 1 123455666667778888886 578999999999999999998853
No 205
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=95.46 E-value=0.053 Score=43.39 Aligned_cols=57 Identities=12% Similarity=0.173 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 146 ADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 146 ~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
.+.-+.+|..|++.+.... .....+.++|||+|+.++-..+...+..++.+|++..+
T Consensus 87 A~~ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 4566778888888876222 23457999999999999999888867789999998654
No 206
>PLN02571 triacylglycerol lipase
Probab=95.19 E-value=0.033 Score=50.56 Aligned_cols=39 Identities=23% Similarity=0.200 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh
Q 017180 147 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
+++.+++..+++.... ...++++.||||||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~----e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKD----EEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCc----ccccEEEeccchHHHHHHHHHHH
Confidence 4455666666766530 12368999999999999998874
No 207
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.07 E-value=0.11 Score=40.53 Aligned_cols=35 Identities=11% Similarity=0.027 Sum_probs=31.4
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
..+.++-|.||||..|+.+.-++|+...++|.+++
T Consensus 100 pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSG 134 (227)
T COG4947 100 PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSG 134 (227)
T ss_pred CCCccccccchhhhhhhhhheeChhHhhhheeecc
Confidence 45567789999999999999999999999999887
No 208
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.02 E-value=1.2 Score=39.80 Aligned_cols=62 Identities=13% Similarity=0.153 Sum_probs=49.4
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHh----cccCCceEEEeCCC-CCCCC-CChHHHHHHHHHHHHhhcC
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALK----GAKGVTKFVEVPGA-LLPQE-EYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~~~~~-H~~~~-e~pe~~~~~i~~fl~~~~~ 373 (376)
..+.+.+.++.|.+++.+..+++. +..-+++-+-+.++ |..+. ..|..+.+...+|+.+...
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVIS 292 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhccc
Confidence 468899999999999998888873 23345666777788 99766 4699999999999998654
No 209
>PLN02162 triacylglycerol lipase
Probab=95.01 E-value=0.04 Score=50.49 Aligned_cols=36 Identities=8% Similarity=0.146 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 147 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
....+.+.+++++.. ..++++.|||+||++|..+|.
T Consensus 262 ~~I~~~L~~lL~k~p------~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 262 YTIRQMLRDKLARNK------NLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHhCC------CceEEEEecChHHHHHHHHHH
Confidence 344556666666653 678999999999999999765
No 210
>PLN00413 triacylglycerol lipase
Probab=94.63 E-value=0.061 Score=49.47 Aligned_cols=35 Identities=9% Similarity=0.246 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 148 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
+..+.+.++++... ..++++.|||+||++|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p------~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNP------TSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCC------CCeEEEEecCHHHHHHHHHHH
Confidence 45566777777653 678999999999999999885
No 211
>PLN02408 phospholipase A1
Probab=94.61 E-value=0.059 Score=48.21 Aligned_cols=37 Identities=19% Similarity=0.211 Sum_probs=26.4
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
..+.|..+++.... ...++++.|||+||.+|..+|..
T Consensus 184 Vl~eI~~ll~~y~~----~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 184 VREEIARLLQSYGD----EPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHhcCC----CCceEEEeccchHHHHHHHHHHH
Confidence 44555666666530 12369999999999999998873
No 212
>PLN02934 triacylglycerol lipase
Probab=94.21 E-value=0.075 Score=49.27 Aligned_cols=35 Identities=11% Similarity=0.232 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 148 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
...+.+.+++++.. ..++++.|||+||++|..+|.
T Consensus 306 ~v~~~lk~ll~~~p------~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHK------NAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCC------CCeEEEeccccHHHHHHHHHH
Confidence 45556667777653 678999999999999999875
No 213
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.12 E-value=0.067 Score=47.86 Aligned_cols=89 Identities=7% Similarity=0.066 Sum_probs=51.4
Q ss_pred CCcEEEecCCCCCc-cchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVS-TVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~-~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+--+|+.||+- + +...|...+......-. +..++..+..|.=.........--+..++++.+.+.... .
T Consensus 80 ~HLvVlthGi~--~~~~~~~~~~~~~~~kk~p--~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~s------i 149 (405)
T KOG4372|consen 80 KHLVVLTHGLH--GADMEYWKEKIEQMTKKMP--DKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYS------I 149 (405)
T ss_pred ceEEEeccccc--cccHHHHHHHHHhhhcCCC--cceEeeeccccchhhccccceeeecccHHHHhhhhhccc------c
Confidence 45788999988 5 67888888888777311 333333333322111111122222334444444444432 5
Q ss_pred CcEEEEecchHHHHHHHHHH
Q 017180 169 SDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~ 188 (376)
.++-.||||+||.++..+..
T Consensus 150 ~kISfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 150 EKISFVGHSLGGLVARYAIG 169 (405)
T ss_pred ceeeeeeeecCCeeeeEEEE
Confidence 78999999999988765433
No 214
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=94.11 E-value=0.046 Score=49.04 Aligned_cols=103 Identities=14% Similarity=0.034 Sum_probs=77.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC---CCCCHHHHHHHHHHHHhCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK---MDYNADVMEKFVVDLINAPDSPVSS 166 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~ 166 (376)
.|+|+..-|++ .+..-.+. .+.+.+ +-+-+.+.+|-||.|.+.+ ...++++-+.|...+++++..-+
T Consensus 63 rPtV~~T~GY~--~~~~p~r~---Ept~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY-- 132 (448)
T PF05576_consen 63 RPTVLYTEGYN--VSTSPRRS---EPTQLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIY-- 132 (448)
T ss_pred CCeEEEecCcc--cccCcccc---chhHhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhc--
Confidence 67888889998 54332322 233321 3678899999999998433 36789999999999888876333
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCCCCcceEEE-eccC
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAA-VAPT 203 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl-~~p~ 203 (376)
.++++--|.|=||+.++.+=.-+|+.|++.|. ++|.
T Consensus 133 -~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 133 -PGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred -cCCceecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 67888899999999999998889999999875 4553
No 215
>PLN02310 triacylglycerol lipase
Probab=94.03 E-value=0.081 Score=47.93 Aligned_cols=40 Identities=20% Similarity=0.193 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 147 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
++..+.+..+++..... ....++++.|||+||.+|+..|.
T Consensus 189 ~qVl~eV~~L~~~y~~~--~e~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGK--GEEVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred HHHHHHHHHHHHhhccc--CCcceEEEEcccHHHHHHHHHHH
Confidence 34455566666654210 02357999999999999999886
No 216
>PLN02324 triacylglycerol lipase
Probab=93.94 E-value=0.072 Score=48.32 Aligned_cols=37 Identities=16% Similarity=0.206 Sum_probs=26.0
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
..+.|..+++... ....++++.|||+||.+|+..|..
T Consensus 199 Vl~eV~~L~~~Yp----~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYK----NEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCC----CCCceEEEecCcHHHHHHHHHHHH
Confidence 4445556666553 012469999999999999998863
No 217
>PLN02802 triacylglycerol lipase
Probab=93.69 E-value=0.11 Score=48.27 Aligned_cols=38 Identities=18% Similarity=0.187 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh
Q 017180 148 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
+..+.+..+++... ....++++.|||+||.+|..+|..
T Consensus 313 qVl~eV~~Ll~~Y~----~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYK----GEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCC----CCcceEEEeccchHHHHHHHHHHH
Confidence 34455666666553 012468999999999999998873
No 218
>PLN03037 lipase class 3 family protein; Provisional
Probab=93.54 E-value=0.12 Score=48.07 Aligned_cols=39 Identities=23% Similarity=0.179 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 148 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
+..++|..+++..... ....+++|.|||+||.+|+..|.
T Consensus 299 QVl~eV~rLv~~Yk~~--ge~~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 299 QVMEEVKRLVNFFKDR--GEEVSLTITGHSLGGALALLNAY 337 (525)
T ss_pred HHHHHHHHHHHhcccc--CCcceEEEeccCHHHHHHHHHHH
Confidence 3445666777655310 02357999999999999999886
No 219
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=93.16 E-value=0.54 Score=48.05 Aligned_cols=93 Identities=12% Similarity=0.204 Sum_probs=64.4
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+|++.|+|-.- +...... .|+++ ...|-||.-. +.....++++.++-...-+++++ +.
T Consensus 2123 ~~~~Ffv~pIE--G~tt~l~----~la~r----------le~PaYglQ~T~~vP~dSies~A~~yirqirkvQ-----P~ 2181 (2376)
T KOG1202|consen 2123 EPPLFFVHPIE--GFTTALE----SLASR----------LEIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQ-----PE 2181 (2376)
T ss_pred CCceEEEeccc--cchHHHH----HHHhh----------cCCcchhhhccccCCcchHHHHHHHHHHHHHhcC-----CC
Confidence 78899999987 5544443 44442 2235566432 33345677888887777778876 67
Q ss_pred CcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccC
Q 017180 169 SDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPT 203 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~ 203 (376)
.|..++|+|+|+.++..+|.. ..+....+|++++.
T Consensus 2182 GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2182 GPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred CCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 899999999999999998872 23345568888763
No 220
>PLN02753 triacylglycerol lipase
Probab=93.14 E-value=0.15 Score=47.58 Aligned_cols=39 Identities=15% Similarity=0.210 Sum_probs=25.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
..+.|..+++..... .....++++.|||+||.+|+..|.
T Consensus 293 Vl~eVkrLl~~Y~~e-~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 293 ILTEVKRLVEEHGDD-DDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHcccc-cCCCceEEEEccCHHHHHHHHHHH
Confidence 344455566554310 001458999999999999999986
No 221
>PLN02761 lipase class 3 family protein
Probab=93.05 E-value=0.11 Score=48.36 Aligned_cols=41 Identities=17% Similarity=0.137 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 148 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
+..+.|..+++...........++++.|||+||.+|...|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 34445555655542000012357999999999999999886
No 222
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=92.87 E-value=0.16 Score=41.02 Aligned_cols=87 Identities=14% Similarity=0.103 Sum_probs=44.7
Q ss_pred HHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh--
Q 017180 112 AQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK-- 189 (376)
Q Consensus 112 ~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~-- 189 (376)
.+.+.+..+.....+..++||--.... ....+...-++++...++....+ =+..+++|+|+|.|+.++..++..
T Consensus 28 ~~~l~~~~g~~~~~~~~V~YpA~~~~~--~y~~S~~~G~~~~~~~i~~~~~~--CP~~kivl~GYSQGA~V~~~~~~~~~ 103 (179)
T PF01083_consen 28 ADALQAQPGGTSVAVQGVEYPASLGPN--SYGDSVAAGVANLVRLIEEYAAR--CPNTKIVLAGYSQGAMVVGDALSGDG 103 (179)
T ss_dssp HHHHHHHCTTCEEEEEE--S---SCGG--SCHHHHHHHHHHHHHHHHHHHHH--STTSEEEEEEETHHHHHHHHHHHHTT
T ss_pred HHHHHhhcCCCeeEEEecCCCCCCCcc--cccccHHHHHHHHHHHHHHHHHh--CCCCCEEEEecccccHHHHHHHHhcc
Confidence 344444322224777778877543221 11112233333344433322100 036789999999999999998776
Q ss_pred ----CCCCcceEEEecc
Q 017180 190 ----NLVKPTAIAAVAP 202 (376)
Q Consensus 190 ----~p~~v~~lvl~~p 202 (376)
..++|.+++++.-
T Consensus 104 l~~~~~~~I~avvlfGd 120 (179)
T PF01083_consen 104 LPPDVADRIAAVVLFGD 120 (179)
T ss_dssp SSHHHHHHEEEEEEES-
T ss_pred CChhhhhhEEEEEEecC
Confidence 2356788888753
No 223
>PLN02719 triacylglycerol lipase
Probab=92.77 E-value=0.18 Score=46.97 Aligned_cols=39 Identities=18% Similarity=0.171 Sum_probs=25.5
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
..+.|..+++..... .....++++.|||+||.+|...|.
T Consensus 279 Vl~eV~rL~~~Ypd~-~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 279 VLTEVKRLVERYGDE-EGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHCCcc-cCCcceEEEecCcHHHHHHHHHHH
Confidence 444455555544200 002357999999999999999886
No 224
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.10 E-value=0.24 Score=44.43 Aligned_cols=36 Identities=17% Similarity=0.111 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 147 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
+.+.+++..+++... .-++.+-|||+||.+|..+|.
T Consensus 155 ~~~~~~~~~L~~~~~------~~~i~vTGHSLGgAlA~laa~ 190 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP------NYSIWVTGHSLGGALASLAAL 190 (336)
T ss_pred HHHHHHHHHHHHhcC------CcEEEEecCChHHHHHHHHHH
Confidence 567778888888875 778999999999999999887
No 225
>PLN02847 triacylglycerol lipase
Probab=91.71 E-value=0.3 Score=46.31 Aligned_cols=21 Identities=10% Similarity=0.061 Sum_probs=19.1
Q ss_pred CCcEEEEecchHHHHHHHHHH
Q 017180 168 ESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
.-+++++|||+||.+|..++.
T Consensus 250 dYkLVITGHSLGGGVAALLAi 270 (633)
T PLN02847 250 DFKIKIVGHSLGGGTAALLTY 270 (633)
T ss_pred CCeEEEeccChHHHHHHHHHH
Confidence 568999999999999999877
No 226
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=91.47 E-value=8.7 Score=33.24 Aligned_cols=110 Identities=12% Similarity=0.230 Sum_probs=69.7
Q ss_pred ecccCCCCCCCcEEEecCCCCCcc-chHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhC
Q 017180 81 KHERESPDPSKNILMIPTISDVST-VEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINA 159 (376)
Q Consensus 81 ~~g~~~~~~~~~vvllHG~~~~~~-~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~ 159 (376)
..+.....+.|.||++--.. ++ ....+...+.|-. ...|++-|+-.--.-.-....+.++++.+-+.+++..
T Consensus 94 r~~~~~r~pdPkvLivapms--GH~aTLLR~TV~alLp-----~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~ 166 (415)
T COG4553 94 RDMPDARKPDPKVLIVAPMS--GHYATLLRGTVEALLP-----YHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINF 166 (415)
T ss_pred hccccccCCCCeEEEEeccc--ccHHHHHHHHHHHhcc-----ccceeEeeccccceeecccCCccHHHHHHHHHHHHHH
Confidence 33333333356677665555 33 3344555666666 6889999986543333233578899999999999999
Q ss_pred CCCCCCCCCCcEEEEecc-----hHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 160 PDSPVSSSESDLVIFGGG-----HAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 160 l~~~~~~~~~~~~lvG~S-----~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
+| .. +++++.. .=+.+++..+...|.....++++.+..
T Consensus 167 ~G-----p~--~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPI 209 (415)
T COG4553 167 LG-----PD--AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPI 209 (415)
T ss_pred hC-----CC--CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcc
Confidence 97 22 4444433 344555555556787888999987643
No 227
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=91.35 E-value=0.43 Score=30.88 Aligned_cols=19 Identities=11% Similarity=0.445 Sum_probs=10.7
Q ss_pred CCCCcEEEecCCCCCccchHh
Q 017180 88 DPSKNILMIPTISDVSTVEEW 108 (376)
Q Consensus 88 ~~~~~vvllHG~~~~~~~~~~ 108 (376)
..+|+|+|.||+. +++..|
T Consensus 41 ~~k~pVll~HGL~--~ss~~w 59 (63)
T PF04083_consen 41 KKKPPVLLQHGLL--QSSDDW 59 (63)
T ss_dssp TT--EEEEE--TT----GGGG
T ss_pred CCCCcEEEECCcc--cChHHH
Confidence 3378899999999 988888
No 228
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=91.18 E-value=0.61 Score=45.13 Aligned_cols=106 Identities=7% Similarity=-0.060 Sum_probs=60.0
Q ss_pred CCcEEEecCCCCCccc-hHh--HHHHHHHHhhhCCcceEEEEeCCC----CCcCC--CCCCCCCCHHHHHHHHHHH---H
Q 017180 90 SKNILMIPTISDVSTV-EEW--RLVAQDIVQRVGKVNWRATIVDWP----GLGYS--DRPKMDYNADVMEKFVVDL---I 157 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~-~~~--~~~~~~L~~~~~~~~~~Vi~~D~~----G~G~S--~~~~~~~~~~~~~~~l~~~---l 157 (376)
-|++|+|||.+..... ..+ ......+..+ +.=|+.+.+| |+.-. +.....+.+.++...+..+ |
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~----~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I 187 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLK----DVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNI 187 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccC----CEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHH
Confidence 4789999997733222 122 1122222222 4556666666 22211 1223456666666555543 4
Q ss_pred hCCCCCCCCCCCcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccC
Q 017180 158 NAPDSPVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPT 203 (376)
Q Consensus 158 ~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~ 203 (376)
...+ +...+|.|+|||.||..+..+... ....+.+.|..++.
T Consensus 188 ~~FG----Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 188 PSFG----GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred HhcC----CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 4444 346789999999999999887662 12356666766653
No 229
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.69 E-value=2.1 Score=33.24 Aligned_cols=78 Identities=10% Similarity=0.100 Sum_probs=51.2
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcce-EEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNW-RATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~-~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
-.||++-||+ .....+..++ +.+ ++ -++++|+...- .+..... -+
T Consensus 12 ~LIvyFaGwg--tpps~v~HLi--lpe-----N~dl~lcYDY~dl~------ldfDfsA-------------------y~ 57 (214)
T COG2830 12 HLIVYFAGWG--TPPSAVNHLI--LPE-----NHDLLLCYDYQDLN------LDFDFSA-------------------YR 57 (214)
T ss_pred EEEEEEecCC--CCHHHHhhcc--CCC-----CCcEEEEeehhhcC------cccchhh-------------------hh
Confidence 3688889999 8777665542 333 44 46678887442 1222211 23
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
.+.||.+|||-.+|-++.+.. ++++.+.+++++
T Consensus 58 hirlvAwSMGVwvAeR~lqg~--~lksatAiNGTg 90 (214)
T COG2830 58 HIRLVAWSMGVWVAERVLQGI--RLKSATAINGTG 90 (214)
T ss_pred hhhhhhhhHHHHHHHHHHhhc--cccceeeecCCC
Confidence 467899999999999987754 456777887754
No 230
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=89.95 E-value=1.4 Score=37.03 Aligned_cols=63 Identities=17% Similarity=0.269 Sum_probs=42.7
Q ss_pred ceEEEEeCCCCC--cCC--CCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh
Q 017180 123 NWRATIVDWPGL--GYS--DRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 123 ~~~Vi~~D~~G~--G~S--~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
|+++..+++|.. ..+ .......+.++-++.|.+.++.... ..++++++|+|.|+.++...+.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~----~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA----AGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc----CCCCEEEEEECHHHHHHHHHHHH
Confidence 678888888871 111 1123455666666677766665321 36889999999999999987763
No 231
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=88.24 E-value=1 Score=40.21 Aligned_cols=35 Identities=9% Similarity=0.062 Sum_probs=27.1
Q ss_pred CCcEEEEecchHHHHHHHHHHhC-----CCCcceEEEecc
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKN-----LVKPTAIAAVAP 202 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~~p 202 (376)
.+|+.|||||+|+.+.......- -..|+.++++..
T Consensus 219 ~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Ga 258 (345)
T PF05277_consen 219 ERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGA 258 (345)
T ss_pred CCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecC
Confidence 67999999999999988776632 234788888864
No 232
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=88.16 E-value=1.5 Score=39.18 Aligned_cols=58 Identities=9% Similarity=0.021 Sum_probs=43.5
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhccc------------------------CC-ceEEEeCCC-CCCCCCChHHHHHHHH
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAK------------------------GV-TKFVEVPGA-LLPQEEYPAMVAQELY 365 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~------------------------~~-~~~~~~~~~-H~~~~e~pe~~~~~i~ 365 (376)
.++|||..|+.|.+|+.-..+.+.+.+ .+ .+++.+.++ |++. .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 469999999999888764444432111 23 677788888 9986 59999999999
Q ss_pred HHHHh
Q 017180 366 QFLQQ 370 (376)
Q Consensus 366 ~fl~~ 370 (376)
.||..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99965
No 233
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=87.17 E-value=1.8 Score=38.65 Aligned_cols=76 Identities=14% Similarity=0.161 Sum_probs=47.2
Q ss_pred eEEEEeCCC-CCcCCCCCC-CCCCH-HHHHHHHHH----HHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh----C--
Q 017180 124 WRATIVDWP-GLGYSDRPK-MDYNA-DVMEKFVVD----LINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK----N-- 190 (376)
Q Consensus 124 ~~Vi~~D~~-G~G~S~~~~-~~~~~-~~~~~~l~~----~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~----~-- 190 (376)
.+|+-+|.| |-|.|-... ..++. +..++|+.. |.+... .....+++|.|-|.||..+-.+|.. .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p---~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~ 78 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHP---QYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 78 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCc---ccccCCeEEEeeccccchHHHHHHHHHhhccc
Confidence 478999998 888885221 12221 223344444 444332 1136789999999999988777762 1
Q ss_pred ----CCCcceEEEecc
Q 017180 191 ----LVKPTAIAAVAP 202 (376)
Q Consensus 191 ----p~~v~~lvl~~p 202 (376)
+-.++++++-+|
T Consensus 79 ~~~~~inLkGi~IGNg 94 (319)
T PLN02213 79 CCEPPINLQGYMLGNP 94 (319)
T ss_pred ccCCceeeeEEEeCCC
Confidence 235677777775
No 234
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=86.67 E-value=2.8 Score=39.69 Aligned_cols=101 Identities=14% Similarity=0.045 Sum_probs=58.4
Q ss_pred cEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhC---CCCCCCCC
Q 017180 92 NILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINA---PDSPVSSS 167 (376)
Q Consensus 92 ~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~---l~~~~~~~ 167 (376)
.|+-+||.|.+ .++..........++.+ ++.|+.+||-=--+.. .+...++.--...++|+. +| ..
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPEaP---FPRaleEv~fAYcW~inn~allG----~T 467 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPEAP---FPRALEEVFFAYCWAINNCALLG----ST 467 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCCCC---CCcHHHHHHHHHHHHhcCHHHhC----cc
Confidence 45666998855 23333444445555542 7999999984332221 223334333333344432 33 23
Q ss_pred CCcEEEEecchHHHHHHHHHH----hCCCCcceEEEecc
Q 017180 168 ESDLVIFGGGHAATLTVRAAK----KNLVKPTAIAAVAP 202 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~----~~p~~v~~lvl~~p 202 (376)
+++++++|-|.||.+.+-.|. .+--..+++++.-+
T Consensus 468 gEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ 506 (880)
T KOG4388|consen 468 GERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYP 506 (880)
T ss_pred cceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecC
Confidence 688999999999986655544 33334578888744
No 235
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=86.22 E-value=4.1 Score=29.20 Aligned_cols=85 Identities=11% Similarity=0.074 Sum_probs=55.8
Q ss_pred chHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCH-HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHH--
Q 017180 105 VEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNA-DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAAT-- 181 (376)
Q Consensus 105 ~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~-~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~-- 181 (376)
+..|..+.+.+... |+..=.+.++.+|.+-..-..... +--.+.|..+++..- ..++++||-|--.-
T Consensus 10 wnly~~l~~Fl~~~----~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP------~~kfiLIGDsgq~Dpe 79 (100)
T PF09949_consen 10 WNLYPFLRDFLRRN----GFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFP------ERKFILIGDSGQHDPE 79 (100)
T ss_pred HHHHHHHHHHHHhc----CCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCC------CCcEEEEeeCCCcCHH
Confidence 44555566666664 688778888888766422111112 344566788888874 78999999775543
Q ss_pred HHHHHHHhCCCCcceEEE
Q 017180 182 LTVRAAKKNLVKPTAIAA 199 (376)
Q Consensus 182 ia~~~a~~~p~~v~~lvl 199 (376)
+-..+|.++|++|.++.+
T Consensus 80 iY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 80 IYAEIARRFPGRILAIYI 97 (100)
T ss_pred HHHHHHHHCCCCEEEEEE
Confidence 333467799999988754
No 236
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=85.63 E-value=2.4 Score=40.15 Aligned_cols=85 Identities=18% Similarity=0.100 Sum_probs=56.3
Q ss_pred HHHHHHhhhCCcceEEEEeCCCCCcCCCC---CCCCCCH-----------HHHHHHHHHHHhCCCCCCCCCCCcEEEEec
Q 017180 111 VAQDIVQRVGKVNWRATIVDWPGLGYSDR---PKMDYNA-----------DVMEKFVVDLINAPDSPVSSSESDLVIFGG 176 (376)
Q Consensus 111 ~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~---~~~~~~~-----------~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~ 176 (376)
+...+.+ ||-++.=|- ||..+.. ....... ..++..-.++++..-. ...+.-+..|.
T Consensus 52 ~~~~~~~-----G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg---~~p~~sY~~Gc 122 (474)
T PF07519_consen 52 MATALAR-----GYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYG---KAPKYSYFSGC 122 (474)
T ss_pred cchhhhc-----CeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhC---CCCCceEEEEe
Confidence 4556776 999999996 4544421 1111222 2222222344444321 12566888999
Q ss_pred chHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 177 GHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 177 S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
|-||.-++..|+++|+..++++.-+|.+
T Consensus 123 S~GGRqgl~~AQryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 123 STGGRQGLMAAQRYPEDFDGILAGAPAI 150 (474)
T ss_pred CCCcchHHHHHHhChhhcCeEEeCCchH
Confidence 9999999999999999999999999864
No 237
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.21 E-value=1.3 Score=41.87 Aligned_cols=22 Identities=14% Similarity=0.196 Sum_probs=18.3
Q ss_pred CCCcEEEEecchHHHHHHHHHH
Q 017180 167 SESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
.+++++.+||||||.++-.+..
T Consensus 524 ~~RPivwI~HSmGGLl~K~lLl 545 (697)
T KOG2029|consen 524 DDRPIVWIGHSMGGLLAKKLLL 545 (697)
T ss_pred CCCceEEEecccchHHHHHHHH
Confidence 4788999999999988876654
No 238
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=82.48 E-value=44 Score=31.44 Aligned_cols=99 Identities=12% Similarity=0.027 Sum_probs=59.2
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.|..|++-|+-....-+.+ ..+..|.. =-.+.=|.|=-|.+=-- ...+ -+...+.|.+-++.|+ ...
T Consensus 289 PPL~VYFSGyR~aEGFEgy-~MMk~Lg~------PfLL~~DpRleGGaFYlGs~ey-E~~I~~~I~~~L~~Lg----F~~ 356 (511)
T TIGR03712 289 PPLNVYFSGYRPAEGFEGY-FMMKRLGA------PFLLIGDPRLEGGAFYLGSDEY-EQGIINVIQEKLDYLG----FDH 356 (511)
T ss_pred CCeEEeeccCcccCcchhH-HHHHhcCC------CeEEeeccccccceeeeCcHHH-HHHHHHHHHHHHHHhC----CCH
Confidence 3456899998732222222 22333322 23445577766655211 1112 2345556667778887 345
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
..++|-|-|||..=|+.++++- ...++|+.-|
T Consensus 357 ~qLILSGlSMGTfgAlYYga~l--~P~AIiVgKP 388 (511)
T TIGR03712 357 DQLILSGLSMGTFGALYYGAKL--SPHAIIVGKP 388 (511)
T ss_pred HHeeeccccccchhhhhhcccC--CCceEEEcCc
Confidence 6799999999999999999863 3446776666
No 239
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=82.38 E-value=3.1 Score=35.67 Aligned_cols=34 Identities=9% Similarity=0.105 Sum_probs=25.7
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
+..++.|-|||+||.+|..+..++. +-.+..-+|
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 4678999999999999999887652 334555555
No 240
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=82.38 E-value=3.1 Score=35.67 Aligned_cols=34 Identities=9% Similarity=0.105 Sum_probs=25.7
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
+..++.|-|||+||.+|..+..++. +-.+..-+|
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 4678999999999999999887652 334555555
No 241
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=76.13 E-value=19 Score=32.31 Aligned_cols=59 Identities=19% Similarity=0.194 Sum_probs=42.8
Q ss_pred hcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCce-EEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 307 ADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTK-FVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 307 ~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
.++ .+|-.|+.|..|....+.....+....|..+ +..+|+. |...-. .+.+.|..|+.+
T Consensus 326 ~RL--alpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n~---~i~esl~~flnr 386 (507)
T COG4287 326 LRL--ALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLINQ---FIKESLEPFLNR 386 (507)
T ss_pred hhc--cccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhHH---HHHHHHHHHHHH
Confidence 456 7899999999999888888888878887654 6788998 986533 344445555544
No 242
>PRK12467 peptide synthase; Provisional
Probab=75.53 E-value=13 Score=45.22 Aligned_cols=96 Identities=13% Similarity=0.012 Sum_probs=67.5
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCc
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESD 170 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 170 (376)
+.+++.|... .+...+..+...+.. +..|+.+..++.-.-.. ...+++.++....+.+.... ...+
T Consensus 3693 ~~l~~~h~~~--r~~~~~~~l~~~l~~-----~~~~~~l~~~~~~~d~~--~~~~~~~~~~~y~~~~~~~~-----~~~p 3758 (3956)
T PRK12467 3693 PALFCRHEGL--GTVFDYEPLAVILEG-----DRHVLGLTCRHLLDDGW--QDTSLQAMAVQYADYILWQQ-----AKGP 3758 (3956)
T ss_pred cceeeechhh--cchhhhHHHHHHhCC-----CCcEEEEeccccccccC--CccchHHHHHHHHHHHHHhc-----cCCC
Confidence 4589999988 777778777777766 68899988876532221 23456666777777776654 3567
Q ss_pred EEEEecchHHHHHHHHHH---hCCCCcceEEEe
Q 017180 171 LVIFGGGHAATLTVRAAK---KNLVKPTAIAAV 200 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~---~~p~~v~~lvl~ 200 (376)
..+.|+|+||.++..++. +.-+.+.-+.++
T Consensus 3759 ~~l~g~s~g~~~a~~~~~~l~~~g~~~~~~~~~ 3791 (3956)
T PRK12467 3759 YGLLGWSLGGTLARLVAELLEREGESEAFLGLF 3791 (3956)
T ss_pred eeeeeeecchHHHHHHHHHHHHcCCceeEEEEE
Confidence 999999999999998877 334455555454
No 243
>PF03283 PAE: Pectinacetylesterase
Probab=74.87 E-value=29 Score=31.58 Aligned_cols=48 Identities=8% Similarity=0.078 Sum_probs=30.2
Q ss_pred HHHHHHHHHhC-CCCCCCCCCCcEEEEecchHHHHHHHHHH----hCCCCcceEEEec
Q 017180 149 MEKFVVDLINA-PDSPVSSSESDLVIFGGGHAATLTVRAAK----KNLVKPTAIAAVA 201 (376)
Q Consensus 149 ~~~~l~~~l~~-l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~----~~p~~v~~lvl~~ 201 (376)
+.+.+.+++.. +. ..++++|-|.|.||.-++..+. ..|..++-..+.+
T Consensus 140 ~~avl~~l~~~gl~-----~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~D 192 (361)
T PF03283_consen 140 LRAVLDDLLSNGLP-----NAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSD 192 (361)
T ss_pred HHHHHHHHHHhcCc-----ccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecc
Confidence 44445555555 43 3578999999999998887655 4554444334433
No 244
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=70.19 E-value=9.4 Score=30.98 Aligned_cols=59 Identities=17% Similarity=0.153 Sum_probs=42.0
Q ss_pred CCcEEEEEeCCCCCCCHHHHHH---HhcccCC--ceEEEeCCC-CCCCCCC---hHHHHHHHHHHHHh
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEA---LKGAKGV--TKFVEVPGA-LLPQEEY---PAMVAQELYQFLQQ 370 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~---~~~~~~~--~~~~~~~~~-H~~~~e~---pe~~~~~i~~fl~~ 370 (376)
++++|-|-|+.|.++..-.... +...+|. ...++.+++ |+-.+.- .+++.-.|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 6688989999999997655443 4444442 345677888 9965543 36788888899875
No 245
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=69.09 E-value=17 Score=34.49 Aligned_cols=63 Identities=14% Similarity=0.127 Sum_probs=44.8
Q ss_pred CCcEEEEEeCCCCCCCHHHHH----HHhcccC--------CceEEEeCCC-CCCCCC--ChHHHHHHHHHHHHhhcCC
Q 017180 312 KLPLLVVSTEGSPRRSKAEME----ALKGAKG--------VTKFVEVPGA-LLPQEE--YPAMVAQELYQFLQQTFEP 374 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~----~~~~~~~--------~~~~~~~~~~-H~~~~e--~pe~~~~~i~~fl~~~~~~ 374 (376)
.-.+++.||..|..+++.... ++.+... -.++..+||. |+.--. .+-.....|.+|+++-.++
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~AP 430 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGKAP 430 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 568899999999998764333 3332221 3578899999 995443 4456889999999976554
No 246
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=65.04 E-value=29 Score=28.63 Aligned_cols=63 Identities=16% Similarity=0.119 Sum_probs=45.8
Q ss_pred eEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecch----HHHHHHHHHHh-CCCCcceEE
Q 017180 124 WRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGH----AATLTVRAAKK-NLVKPTAIA 198 (376)
Q Consensus 124 ~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~----Gg~ia~~~a~~-~p~~v~~lv 198 (376)
-+|+..|-++.. .|+.+.+++.+.+++++.+ -.++++|+|. |..++-++|.+ .-..+..++
T Consensus 78 d~V~~~~~~~~~-------~~~~e~~a~al~~~i~~~~-------p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~ 143 (202)
T cd01714 78 DRAILVSDRAFA-------GADTLATAKALAAAIKKIG-------VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVS 143 (202)
T ss_pred CEEEEEeccccc-------CCChHHHHHHHHHHHHHhC-------CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEE
Confidence 378888776543 3678899999999998864 4699999988 88888888884 223455555
Q ss_pred Ee
Q 017180 199 AV 200 (376)
Q Consensus 199 l~ 200 (376)
-+
T Consensus 144 ~l 145 (202)
T cd01714 144 KI 145 (202)
T ss_pred EE
Confidence 44
No 247
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=61.97 E-value=52 Score=28.69 Aligned_cols=40 Identities=13% Similarity=0.017 Sum_probs=27.9
Q ss_pred CHHHHHHH-HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh
Q 017180 145 NADVMEKF-VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 145 ~~~~~~~~-l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
.++.-+.. ...+++... ..+.+.++|.|-|+.+|-.+|..
T Consensus 72 g~~~~I~~ay~~l~~~~~-----~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNYE-----PGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred chHHHHHHHHHHHHhccC-----CcceEEEEecCccHHHHHHHHHH
Confidence 34443333 334446654 47789999999999999999874
No 248
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=61.17 E-value=59 Score=29.93 Aligned_cols=101 Identities=15% Similarity=0.172 Sum_probs=62.5
Q ss_pred cEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-C---------C-------------CCCHHH
Q 017180 92 NILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-K---------M-------------DYNADV 148 (376)
Q Consensus 92 ~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~---------~-------------~~~~~~ 148 (376)
+|+++--+- .-..++..+.+.+.+. |.+|+.+|.-=.|....+ . . ...++.
T Consensus 3 tI~iigT~D--TK~~E~~yl~~~i~~~----G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~ 76 (403)
T PF06792_consen 3 TIAIIGTLD--TKGEELLYLRDQIEAQ----GVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEA 76 (403)
T ss_pred EEEEEEccC--CCHHHHHHHHHHHHHC----CCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHH
Confidence 345544444 4445667777777776 999999997655554322 1 0 012233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEe
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAV 200 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~ 200 (376)
+++-+..++..+.... ...-++-+|.|.|..++......-|--+-++++-
T Consensus 77 M~~ga~~~v~~l~~~g--~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 77 MARGAARFVSDLYDEG--KIDGVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred HHHHHHHHHHHHHhcC--CccEEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 3444445555543111 2455778999999999999999878777776653
No 249
>PRK02399 hypothetical protein; Provisional
Probab=59.25 E-value=89 Score=28.79 Aligned_cols=101 Identities=17% Similarity=0.184 Sum_probs=59.0
Q ss_pred cEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCC----------------------CCCCHHH
Q 017180 92 NILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPK----------------------MDYNADV 148 (376)
Q Consensus 92 ~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~----------------------~~~~~~~ 148 (376)
.|+++--+- .-..++..+.+.+.+. |.+|+.+|.-..|... .+. ....++.
T Consensus 5 ~I~iigT~D--TK~~E~~yl~~~i~~~----g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~ 78 (406)
T PRK02399 5 RIYIAGTLD--TKGEELAYVKDLIEAA----GLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAA 78 (406)
T ss_pred EEEEEeccC--CcHHHHHHHHHHHHHC----CCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHH
Confidence 444443333 3345566666677665 8999999985444221 110 0111233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEe
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAV 200 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~ 200 (376)
+.+-...++..+..+. ...-++-+|.|.|..++......-|--+-++++-
T Consensus 79 M~~ga~~~v~~L~~~g--~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVS 128 (406)
T PRK02399 79 MAEGAAAFVRELYERG--DVAGVIGLGGSGGTALATPAMRALPIGVPKLMVS 128 (406)
T ss_pred HHHHHHHHHHHHHhcC--CccEEEEecCcchHHHHHHHHHhCCCCCCeEEEE
Confidence 4444445555432111 2456888999999999999988877766666543
No 250
>COG0218 Predicted GTPase [General function prediction only]
Probab=56.60 E-value=13 Score=30.31 Aligned_cols=55 Identities=11% Similarity=0.166 Sum_probs=30.7
Q ss_pred CCcEEEEEeCCCCCCCHHHHHH---Hhcc---cCCce--EEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEA---LKGA---KGVTK--FVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~---~~~~---~~~~~--~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
.+|++++.-.-|.+-..+..+. .++. .+... ++.++-. ..- -++..+.|.+++..
T Consensus 135 ~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~G----i~~l~~~i~~~~~~ 198 (200)
T COG0218 135 GIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKKG----IDELKAKILEWLKE 198 (200)
T ss_pred CCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEecccccC----HHHHHHHHHHHhhc
Confidence 7899999999998776544332 2211 12222 4444433 222 35666677776654
No 251
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=55.50 E-value=18 Score=34.84 Aligned_cols=34 Identities=9% Similarity=0.073 Sum_probs=26.7
Q ss_pred EEEEecchHHHHHHHHHHh-CCCCcceEEEeccCC
Q 017180 171 LVIFGGGHAATLTVRAAKK-NLVKPTAIAAVAPTW 204 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~~-~p~~v~~lvl~~p~~ 204 (376)
+|.-+.|=||..++..|.+ ....|++++...|..
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v 321 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNV 321 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCcc
Confidence 4446889999999999984 345789998887754
No 252
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=51.26 E-value=9.8 Score=33.92 Aligned_cols=30 Identities=13% Similarity=0.080 Sum_probs=23.1
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
+.++++..| ..+-.++|||+|=..|+.++.
T Consensus 74 l~~~l~~~G------i~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSWG------IKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHTT------HCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhcccc------cccceeeccchhhHHHHHHCC
Confidence 345667776 788899999999988887654
No 253
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=51.01 E-value=35 Score=31.39 Aligned_cols=65 Identities=15% Similarity=0.116 Sum_probs=41.8
Q ss_pred HHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCC-----ChHHHHHHHHHHHH
Q 017180 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEE-----YPAMVAQELYQFLQ 369 (376)
Q Consensus 301 ~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e-----~pe~~~~~i~~fl~ 369 (376)
++..-++.- ...+++|.|++|++.-.. -.+.+...+..+.+.|++ |...+. ..++....|.+|..
T Consensus 342 dI~~Wvr~~--~~rmlFVYG~nDPW~A~~--f~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 342 DIDRWVRNN--GPRMLFVYGENDPWSAEP--FRLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred HHHHHHHhC--CCeEEEEeCCCCCcccCc--cccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 344445554 678999999999976521 112233457788889999 985543 23455666777754
No 254
>TIGR02683 upstrm_HI1419 probable addiction module killer protein. Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the upstream member of a gene pair, where the downstream member is a predicted DNA-binding protein from a clade within Pfam helix-turn-helix family pfam01381. These gene pairs, when found on the bacterial chromosome, often are located with prophage regions, but also in both integrated plasmid regions and near housekeeping genes. Analysis suggests that the gene pair may serve as an addiction module.
Probab=50.99 E-value=30 Score=24.39 Aligned_cols=30 Identities=10% Similarity=0.191 Sum_probs=20.0
Q ss_pred ceEEeecCC-ceeEEEEecccCCCCCCCcEEEecCCC
Q 017180 65 NWQWKFKEN-SINIYYEKHERESPDPSKNILMIPTIS 100 (376)
Q Consensus 65 ~~~~~~~~~-g~~l~y~~~g~~~~~~~~~vvllHG~~ 100 (376)
.+.+|.... +.++.|...+. ..+|++||+.
T Consensus 47 ~~ElR~r~g~~yRiif~~~~~------~~vvll~gf~ 77 (95)
T TIGR02683 47 VSELRIDFGPGYRVYFTQRGK------VIILLLCGGD 77 (95)
T ss_pred cEEEEecCCCCEEEEEEEECC------EEEEEEeCEe
Confidence 345554433 78888877753 3588999976
No 255
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=50.63 E-value=20 Score=31.51 Aligned_cols=30 Identities=10% Similarity=-0.133 Sum_probs=22.9
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
+.+++.+.+ .++..++|||+|-..|+.++.
T Consensus 66 l~~~l~~~g------~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALL------PRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcC------CCCcEEeecCHHHHHHHHHhC
Confidence 345556666 578899999999988887764
No 256
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=50.24 E-value=19 Score=31.65 Aligned_cols=29 Identities=10% Similarity=-0.024 Sum_probs=22.3
Q ss_pred HHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 154 VDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 154 ~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
.+++...+ .++-.++|||+|-..|+.++.
T Consensus 73 ~~~l~~~G------i~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 73 ARLWRSWG------VRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHcC------CcccEEEecCHHHHHHHHHhC
Confidence 34556666 677899999999988887664
No 257
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=46.69 E-value=46 Score=22.41 Aligned_cols=23 Identities=17% Similarity=0.265 Sum_probs=18.0
Q ss_pred CCcEEEEecchHHHHHHHHHHhC
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKN 190 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~ 190 (376)
.+++.++|.|.|-.+|.+.+...
T Consensus 39 pK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 39 PKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp -SEEEEES-SSHHHHHHHHHHHH
T ss_pred CceEEEEecCCcccHHHHHHHHh
Confidence 46789999999999998887753
No 258
>COG3933 Transcriptional antiterminator [Transcription]
Probab=45.18 E-value=1.3e+02 Score=28.17 Aligned_cols=72 Identities=11% Similarity=0.102 Sum_probs=50.5
Q ss_pred cEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcE
Q 017180 92 NILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDL 171 (376)
Q Consensus 92 ~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~ 171 (376)
.||..||.. . ......++..|-+ .--+.++|+| .+.++.+..+.+.+-+++.. .++=
T Consensus 111 vIiiAHG~s--T-ASSmaevanrLL~-----~~~~~aiDMP---------Ldvsp~~vle~l~e~~k~~~------~~~G 167 (470)
T COG3933 111 VIIIAHGYS--T-ASSMAEVANRLLG-----EEIFIAIDMP---------LDVSPSDVLEKLKEYLKERD------YRSG 167 (470)
T ss_pred EEEEecCcc--h-HHHHHHHHHHHhh-----ccceeeecCC---------CcCCHHHHHHHHHHHHHhcC------ccCc
Confidence 577779977 3 3444566777776 4678899998 66788888888988888875 3443
Q ss_pred EEEecchHHHHHHHH
Q 017180 172 VIFGGGHAATLTVRA 186 (376)
Q Consensus 172 ~lvG~S~Gg~ia~~~ 186 (376)
+++=..||......=
T Consensus 168 lllLVDMGSL~~f~~ 182 (470)
T COG3933 168 LLLLVDMGSLTSFGS 182 (470)
T ss_pred eEEEEecchHHHHHH
Confidence 344457887666543
No 259
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=45.06 E-value=28 Score=27.29 Aligned_cols=60 Identities=17% Similarity=0.199 Sum_probs=35.8
Q ss_pred ceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 123 NWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 123 ~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
+-.||++|-.|-- ++.+++++.|..+...-. .+-++++|.+.|-.-.+.-. .+..+.+++
T Consensus 67 ~~~~i~Ld~~Gk~--------~sS~~fA~~l~~~~~~g~------~~i~F~IGG~~G~~~~~~~~------a~~~lSLS~ 126 (155)
T PF02590_consen 67 NDYVILLDERGKQ--------LSSEEFAKKLERWMNQGK------SDIVFIIGGADGLSEEVRKR------ADEKLSLSK 126 (155)
T ss_dssp TSEEEEE-TTSEE----------HHHHHHHHHHHHHTTS-------EEEEEE-BTTB--HHHHHH-------SEEEES-S
T ss_pred CCEEEEEcCCCcc--------CChHHHHHHHHHHHhcCC------ceEEEEEecCCCCCHHHHhh------cCceEEEec
Confidence 6789999998764 566888999988877642 34578899999854333322 235555555
No 260
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=43.67 E-value=2.4e+02 Score=26.16 Aligned_cols=99 Identities=12% Similarity=0.105 Sum_probs=55.1
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCCC---cCCCCCCCCCCHHHHHHHHHHHHhCCCCCCC
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPGL---GYSDRPKMDYNADVMEKFVVDLINAPDSPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~---G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 165 (376)
+.|||++.-.... .........+..|.+. |+.|+-++ +|+ |+... ..-...++....+...+....
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~----G~~ii~P~-~g~la~~~~g~-gr~~~~~~I~~~~~~~~~~~~---- 185 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSR----GVEIIGPA-SGRLACGDVGP-GRMAEPEEIVAAAERALSPKD---- 185 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHC----CCEEECCC-CccccCCCcCC-CCCCCHHHHHHHHHHHhhhcc----
Confidence 3467777754411 2223355677778776 88888654 343 33322 234456676666666653311
Q ss_pred CCCCcEEEEec---------------c---hHHHHHHHHHHhCCCCcceEEEecc
Q 017180 166 SSESDLVIFGG---------------G---HAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 166 ~~~~~~~lvG~---------------S---~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
..++++.+-|. | ||..+|..++.++ ..+++++.
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~G----a~V~~v~~ 236 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRG----ADVTLVSG 236 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCC----CEEEEeCC
Confidence 13566777776 3 5666666666653 34566653
No 261
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=43.40 E-value=13 Score=29.25 Aligned_cols=48 Identities=19% Similarity=0.233 Sum_probs=27.3
Q ss_pred CCCcCCC--CCC-CCCCHHHHHHHH----HHHHhCCCCCCCCCCCcEEEEecchHHH
Q 017180 132 PGLGYSD--RPK-MDYNADVMEKFV----VDLINAPDSPVSSSESDLVIFGGGHAAT 181 (376)
Q Consensus 132 ~G~G~S~--~~~-~~~~~~~~~~~l----~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ 181 (376)
-|||... .+. ..++.++++.-| ..+.+..... ....++.|+|.|++..
T Consensus 62 VGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~--~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 62 VGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGIN--ISPKKISLVGCSLADN 116 (157)
T ss_dssp E--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT----ESEEEEESSS-S-T
T ss_pred EEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCC--CCCCEEEEEEecccCC
Confidence 4788773 111 467888888888 4454443211 1356899999999887
No 262
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=43.18 E-value=1.5e+02 Score=28.89 Aligned_cols=103 Identities=14% Similarity=0.160 Sum_probs=58.7
Q ss_pred CCcEEEecCCCCCccchHhHHHH----HHHHhhhCCcceEEEEeCC----CCCcCCCCCCCC---CCHHHHHHHHHHHHh
Q 017180 90 SKNILMIPTISDVSTVEEWRLVA----QDIVQRVGKVNWRATIVDW----PGLGYSDRPKMD---YNADVMEKFVVDLIN 158 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~----~~L~~~~~~~~~~Vi~~D~----~G~G~S~~~~~~---~~~~~~~~~l~~~l~ 158 (376)
.-|+=+-=|++ ........+. ..|.-.+++.|=.|+.-.- +-||.-+.+... .....+.+.|.+++.
T Consensus 258 ~ipLTLSiGvg--~g~~~~~elg~vA~~~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~~ekrTRvRaRvis~al~d~i~ 335 (655)
T COG3887 258 NIPLTLSIGVG--YGENNLIELGEVAQSNLDLALGRGGDQVVIKENNGKVRFYGGKSNPMEKRTRVRARVISTALSDIIK 335 (655)
T ss_pred CcceEEEEEec--cCcccHHHHHHHHHHhHHHHhccCCceEEEEcCCCceeeeCCCcchhHHhHHHHHHHHHHHHHHHHh
Confidence 45676666766 3333332222 2222234444777877643 335544433322 223344455555555
Q ss_pred CCCCCCCCCCCcEEEEec------chHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 159 APDSPVSSSESDLVIFGG------GHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 159 ~l~~~~~~~~~~~~lvG~------S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
+ .++|+++|| ++|+++++..-+..-.+ .+-++++|.
T Consensus 336 e--------~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 336 E--------SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred h--------cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 5 468999999 89999999876654434 567777773
No 263
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=42.68 E-value=2.8e+02 Score=25.67 Aligned_cols=99 Identities=11% Similarity=0.106 Sum_probs=56.6
Q ss_pred CcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCCC--cCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 91 KNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPGL--GYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 91 ~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~--G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
.|||++.-.... .........+..|.+. |+.|+-+..--+ |+... ....+.++..+.+...+...+ ...
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~----G~~vv~P~~g~~ac~~~g~-g~~~~~~~i~~~v~~~~~~~~---~~~ 184 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDD----GYIFIEPDSGLLACGDEGK-GRLAEPETIVKAAEREFSPKE---DLE 184 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHC----CcEEECCCCcccccccccC-CCCCCHHHHHHHHHHHHhhcc---ccC
Confidence 467877764411 2223456777788875 787766653222 43331 134556777676666654311 113
Q ss_pred CCcEEEEec------------------chHHHHHHHHHHhCCCCcceEEEec
Q 017180 168 ESDLVIFGG------------------GHAATLTVRAAKKNLVKPTAIAAVA 201 (376)
Q Consensus 168 ~~~~~lvG~------------------S~Gg~ia~~~a~~~p~~v~~lvl~~ 201 (376)
++++.+.|. .||..+|..++.++ ..++++.
T Consensus 185 ~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G----a~V~~~~ 232 (390)
T TIGR00521 185 GKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG----ADVTLIT 232 (390)
T ss_pred CceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC----CEEEEeC
Confidence 566777666 47788888877754 3456654
No 264
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=41.54 E-value=71 Score=24.91 Aligned_cols=59 Identities=15% Similarity=0.247 Sum_probs=39.8
Q ss_pred HHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 110 LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 110 ~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
.+...+.+ |-.|++.|.+|=- .+.+.+++.+..+-+.- .+=.+++|.|.|=.-++...+
T Consensus 59 ~il~~i~~-----~~~vi~Ld~~Gk~--------~sSe~fA~~l~~~~~~G-------~~i~f~IGG~~Gl~~~~~~~a 117 (155)
T COG1576 59 AILAAIPK-----GSYVVLLDIRGKA--------LSSEEFADFLERLRDDG-------RDISFLIGGADGLSEAVKARA 117 (155)
T ss_pred HHHHhcCC-----CCeEEEEecCCCc--------CChHHHHHHHHHHHhcC-------CeEEEEEeCcccCCHHHHHHH
Confidence 34455555 7899999998754 45577777766664431 233677899999877776644
No 265
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=40.80 E-value=57 Score=26.30 Aligned_cols=58 Identities=5% Similarity=0.157 Sum_probs=35.0
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCC--CCcCCCCCCCCCCHHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWP--GLGYSDRPKMDYNADVMEKFV 153 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~--G~G~S~~~~~~~~~~~~~~~l 153 (376)
++.+|++-|+.+++-+..-..+...|.+. |++++.+|== =||.+. ...++.++-.+.+
T Consensus 22 ~~~viW~TGLSGsGKSTiA~ale~~L~~~----G~~~y~LDGDnvR~gL~~--dLgFs~edR~eni 81 (197)
T COG0529 22 KGAVIWFTGLSGSGKSTIANALEEKLFAK----GYHVYLLDGDNVRHGLNR--DLGFSREDRIENI 81 (197)
T ss_pred CCeEEEeecCCCCCHHHHHHHHHHHHHHc----CCeEEEecChhHhhcccC--CCCCChHHHHHHH
Confidence 56799999999444444445556666665 9999999821 155543 1334444444333
No 266
>PRK10279 hypothetical protein; Provisional
Probab=40.01 E-value=36 Score=30.06 Aligned_cols=23 Identities=9% Similarity=-0.068 Sum_probs=19.5
Q ss_pred CCcEEEEecchHHHHHHHHHHhC
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKN 190 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~ 190 (376)
...-.++|-|+|+.++..+|...
T Consensus 32 i~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 32 IEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred CCcCEEEEEcHHHHHHHHHHcCC
Confidence 45678899999999999999753
No 267
>cd06896 PX_PI3K_C2_gamma The phosphoinositide binding Phox Homology Domain of the Gamma Isoform of Class II Phosphoinositide 3-Kinases. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. The Phosphoinositide 3-Kinase (PI3K) family of enzymes catalyzes the phosphorylation of the 3-hydroxyl group of the inositol ring of phosphatidylinositol. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. PI3Ks are divided into three main classes (I, II, and III) based on their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PI as a substrate to produce PI3P, but can also phosphorylate PI4P to produce PI(3,4)P2. They function as monomers and do not associate with any regulatory subunits. Class II enzymes contain an N-terminal Ras binding domain, a lipid binding C2 dom
Probab=39.64 E-value=57 Score=23.24 Aligned_cols=46 Identities=20% Similarity=0.183 Sum_probs=35.2
Q ss_pred HHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcCCC
Q 017180 330 EMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFEPS 375 (376)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~~~ 375 (376)
....+++..|...+-.+|+. |.+.....+.-...|..+++.+++.+
T Consensus 39 LH~~L~~~FP~~~LP~fP~~~~~~~~~~~~~R~~~L~~Yl~~Ll~~~ 85 (101)
T cd06896 39 LHSQLQKQFPSLALPEFPHWWHLPFTDSDHKRVRDLNHYLEQLLSGS 85 (101)
T ss_pred HHHHHHHHCccccccCCCCccccCcccHHHHHHHHHHHHHHHHHccC
Confidence 34455667888888888998 88877776777888999998887654
No 268
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=39.36 E-value=54 Score=31.06 Aligned_cols=35 Identities=9% Similarity=0.057 Sum_probs=26.0
Q ss_pred CCcEEEEecchHHHHHHHHHH-----hCCCCcceEEEecc
Q 017180 168 ESDLVIFGGGHAATLTVRAAK-----KNLVKPTAIAAVAP 202 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~-----~~p~~v~~lvl~~p 202 (376)
.+|+.|||+|+|+.+...... ..-..|..+++...
T Consensus 446 ~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~Ga 485 (633)
T KOG2385|consen 446 NRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGA 485 (633)
T ss_pred CCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccC
Confidence 789999999999999885444 22345777777754
No 269
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=38.97 E-value=86 Score=24.65 Aligned_cols=49 Identities=12% Similarity=0.163 Sum_probs=33.9
Q ss_pred ceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHH
Q 017180 123 NWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVR 185 (376)
Q Consensus 123 ~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~ 185 (376)
+-.+|++|-+|-- .+.+++++.+......-. .+-++++|.+.|-.-.+.
T Consensus 67 ~~~~i~LDe~Gk~--------~sS~~fA~~l~~~~~~g~------~~i~F~IGGa~G~~~~v~ 115 (157)
T PRK00103 67 GARVIALDERGKQ--------LSSEEFAQELERWRDDGR------SDVAFVIGGADGLSPAVK 115 (157)
T ss_pred CCEEEEEcCCCCc--------CCHHHHHHHHHHHHhcCC------ccEEEEEcCccccCHHHH
Confidence 4579999998753 556788888887754432 345778899888654443
No 270
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=37.90 E-value=40 Score=29.92 Aligned_cols=22 Identities=14% Similarity=-0.044 Sum_probs=18.7
Q ss_pred CCcEEEEecchHHHHHHHHHHh
Q 017180 168 ESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
...-.++|-|+|+.++..+|..
T Consensus 42 i~~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 42 IPVDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred CCCCEEEEECHHHHHHHHHHcC
Confidence 4456789999999999999885
No 271
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=37.43 E-value=41 Score=29.34 Aligned_cols=21 Identities=14% Similarity=-0.094 Sum_probs=17.7
Q ss_pred CCcEEEEecchHHHHHHHHHH
Q 017180 168 ESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
..+..++|||+|=..|+.++.
T Consensus 82 i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred CCCCEEeecCHHHHHHHHHhC
Confidence 567899999999988887765
No 272
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=37.15 E-value=42 Score=28.98 Aligned_cols=74 Identities=14% Similarity=0.214 Sum_probs=49.3
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
.|.||++.|+.+++-...-..++..|.-+ |++|.++.-|-- -+..-.-+..+-.++- ..+
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDPR----g~~V~s~~~Pt~-----------eE~~~p~lWRfw~~lP-----~~G 114 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNPQ----GCQVTSFKAPSA-----------EELDHDFLWRIHKALP-----ERG 114 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCCC----eeEEEeCCCCCH-----------HHHcCchHHHHHHhCC-----CCC
Confidence 47899999999666667777888888776 999999855411 1111223556777764 356
Q ss_pred cEEEEecchHHHHH
Q 017180 170 DLVIFGGGHAATLT 183 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia 183 (376)
.+.|+=.|+=+-+.
T Consensus 115 ~i~IF~RSWY~~vl 128 (264)
T TIGR03709 115 EIGIFNRSHYEDVL 128 (264)
T ss_pred eEEEEcCccccchh
Confidence 77787667655443
No 273
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=36.75 E-value=47 Score=26.41 Aligned_cols=22 Identities=18% Similarity=0.037 Sum_probs=18.8
Q ss_pred CCcEEEEecchHHHHHHHHHHh
Q 017180 168 ESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
...-.++|-|.|+.++..++..
T Consensus 25 i~~d~v~GtSaGAi~aa~~a~g 46 (172)
T cd07198 25 PLIDIIAGTSAGAIVAALLASG 46 (172)
T ss_pred CCCCEEEEECHHHHHHHHHHcC
Confidence 4467889999999999999885
No 274
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=35.64 E-value=50 Score=28.68 Aligned_cols=22 Identities=14% Similarity=-0.130 Sum_probs=18.4
Q ss_pred CCcEEEEecchHHHHHHHHHHh
Q 017180 168 ESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
...-.+.|-|+|+.++..+|..
T Consensus 37 i~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 37 IPIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred CCccEEEEECHHHHHHHHHHcC
Confidence 4456778999999999999975
No 275
>PF05973 Gp49: Phage derived protein Gp49-like (DUF891); InterPro: IPR009241 This entry consists of several hypothetical viral and bacterial proteins some are annotated as addiction module killer proteins.
Probab=34.22 E-value=54 Score=22.77 Aligned_cols=32 Identities=16% Similarity=0.251 Sum_probs=21.2
Q ss_pred ccceEEee--cCCceeEEEEecccCCCCCCCcEEEecCCC
Q 017180 63 TGNWQWKF--KENSINIYYEKHERESPDPSKNILMIPTIS 100 (376)
Q Consensus 63 ~~~~~~~~--~~~g~~l~y~~~g~~~~~~~~~vvllHG~~ 100 (376)
...|..+. +++..++.|...+.. .||++||+.
T Consensus 39 ~~i~ElR~~~~~~~~Ri~y~~~~~~------~ivll~~f~ 72 (91)
T PF05973_consen 39 DGIYELRVRGGSNIYRILYFFDGGD------IIVLLHGFI 72 (91)
T ss_pred CCeEEEEEeecCCcceEEEEEcCcc------EEEEEEEEE
Confidence 34444444 344678888877642 599999987
No 276
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=34.19 E-value=52 Score=27.77 Aligned_cols=74 Identities=7% Similarity=0.136 Sum_probs=50.2
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
.|.||++.|+.+++-...-..+...|..+ |++|.++.-|-- .+..-.-+..+-..+- ..+
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPR----g~~v~~~~~pt~-----------eE~~~p~lwRfw~~lP-----~~G 89 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPR----GARVVALPKPSD-----------RERTQWYFQRYVQHLP-----AAG 89 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCC----eeEEEeCCCCCH-----------HHHcChHHHHHHHhCC-----CCC
Confidence 56889999999666666777777777776 999999765511 1122223566777774 467
Q ss_pred cEEEEecchHHHHH
Q 017180 170 DLVIFGGGHAATLT 183 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia 183 (376)
.+.|+=.|+=+.+.
T Consensus 90 ~i~IF~rSwY~~~l 103 (230)
T TIGR03707 90 EIVLFDRSWYNRAG 103 (230)
T ss_pred eEEEEeCchhhhHH
Confidence 78888777766543
No 277
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=34.06 E-value=50 Score=29.22 Aligned_cols=31 Identities=19% Similarity=0.110 Sum_probs=24.1
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
+.+.+++.+ ...-+|.|-|+|+.++..+|..
T Consensus 29 Vl~aL~e~g------i~~~~iaGtS~GAiva~l~A~g 59 (306)
T COG1752 29 VLKALEEAG------IPIDVIAGTSAGAIVAALYAAG 59 (306)
T ss_pred HHHHHHHcC------CCccEEEecCHHHHHHHHHHcC
Confidence 344555554 5678889999999999999984
No 278
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=33.27 E-value=1.4e+02 Score=25.99 Aligned_cols=70 Identities=14% Similarity=0.206 Sum_probs=43.4
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC--------c-------CCCCCCCCCCHHHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL--------G-------YSDRPKMDYNADVMEKFVV 154 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~--------G-------~S~~~~~~~~~~~~~~~l~ 154 (376)
-|-|+|.-|.+ ..++.|++. ||.||.+|+-=- | .-++...-.+.+...+.+.
T Consensus 252 vPmi~fakG~g---------~~Le~l~~t----G~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~ 318 (359)
T KOG2872|consen 252 VPMILFAKGSG---------GALEELAQT----GYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVK 318 (359)
T ss_pred CceEEEEcCcc---------hHHHHHHhc----CCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHH
Confidence 36778888877 356778886 999999998421 1 1111112345566777777
Q ss_pred HHHhCCCCCCCCCCCcEEEEecc
Q 017180 155 DLINAPDSPVSSSESDLVIFGGG 177 (376)
Q Consensus 155 ~~l~~l~~~~~~~~~~~~lvG~S 177 (376)
+.++..| ..+-+.=+||.
T Consensus 319 ~mv~~fG-----~~ryI~NLGHG 336 (359)
T KOG2872|consen 319 QMVKDFG-----KSRYIANLGHG 336 (359)
T ss_pred HHHHHhC-----ccceEEecCCC
Confidence 8888876 22333336764
No 279
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=32.71 E-value=58 Score=26.34 Aligned_cols=22 Identities=14% Similarity=-0.073 Sum_probs=18.3
Q ss_pred CCcEEEEecchHHHHHHHHHHh
Q 017180 168 ESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
...-+++|-|.|+.+|..++..
T Consensus 26 ~~~d~i~GtSaGai~aa~~a~g 47 (194)
T cd07207 26 ILKKRVAGTSAGAITAALLALG 47 (194)
T ss_pred CCcceEEEECHHHHHHHHHHcC
Confidence 3446889999999999999874
No 280
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=32.55 E-value=2.2e+02 Score=23.55 Aligned_cols=33 Identities=18% Similarity=0.172 Sum_probs=23.7
Q ss_pred cEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCC
Q 017180 92 NILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWP 132 (376)
Q Consensus 92 ~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~ 132 (376)
++..+-|.+ +..=+.+...|++. |++|++.|+.
T Consensus 15 k~~~vtGg~----sGIGrAia~~la~~----Garv~v~dl~ 47 (256)
T KOG1200|consen 15 KVAAVTGGS----SGIGRAIAQLLAKK----GARVAVADLD 47 (256)
T ss_pred ceeEEecCC----chHHHHHHHHHHhc----CcEEEEeecc
Confidence 356666633 34556788899987 9999998875
No 281
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=32.07 E-value=43 Score=27.13 Aligned_cols=33 Identities=9% Similarity=0.337 Sum_probs=24.7
Q ss_pred cEEEecC---CCCCccchHhHHHHHHHHhhhCCcceEEEEeC
Q 017180 92 NILMIPT---ISDVSTVEEWRLVAQDIVQRVGKVNWRATIVD 130 (376)
Q Consensus 92 ~vvllHG---~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D 130 (376)
.||++|. .. .+......+++.|.++ ||+++.++
T Consensus 153 ~Iil~Hd~~~~~--~t~~~l~~~i~~l~~~----Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAK--QTVKALPTIIKKLKEK----GYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcH--hHHHHHHHHHHHHHHC----CCEEEEHH
Confidence 4999993 23 4556677888888887 99998764
No 282
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=32.02 E-value=53 Score=31.74 Aligned_cols=30 Identities=7% Similarity=-0.045 Sum_probs=23.4
Q ss_pred HHHH-hCCCCCCCCCCCcEEEEecchHHHHHHHHHHh
Q 017180 154 VDLI-NAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 154 ~~~l-~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
.+++ +..+ .++-.++|||+|=..|+..|.-
T Consensus 255 a~ll~~~~G------I~Pdav~GHSlGE~aAa~aAGv 285 (538)
T TIGR02816 255 TQLLCDEFA------IKPDFALGYSKGEASMWASLGV 285 (538)
T ss_pred HHHHHHhcC------CCCCEEeecCHHHHHHHHHhCC
Confidence 3444 4666 7788999999999999888773
No 283
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=31.57 E-value=29 Score=29.27 Aligned_cols=74 Identities=11% Similarity=0.129 Sum_probs=43.0
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHH-HHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK-FVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~-~l~~~l~~l~~~~~~~~ 168 (376)
.|.||++.|+.+++-+..-..+...|..+ |++|.++.-|.- ++... -+..+-.++- ..
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR----~~~v~~~~~pt~------------eE~~~p~lwRfw~~lP-----~~ 88 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPR----GFRVHAFGKPTD------------EELRRPFLWRFWRALP-----AR 88 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GG----GEEEEE-SS--H------------HHHTS-TTHHHHTTS-------T
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCC----eeEEEeCCCCCh------------hHcCCCcHHHHHHhCC-----CC
Confidence 45789999999555455556666666665 999999887622 22222 2456667774 35
Q ss_pred CcEEEEecchHHHHHH
Q 017180 169 SDLVIFGGGHAATLTV 184 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~ 184 (376)
+.+.++=.|+=..+..
T Consensus 89 G~I~if~rSWY~~~l~ 104 (228)
T PF03976_consen 89 GQIGIFDRSWYEDVLV 104 (228)
T ss_dssp T-EEEEES-GGGGGTH
T ss_pred CEEEEEecchhhHHHH
Confidence 6788887777554443
No 284
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=30.47 E-value=77 Score=26.51 Aligned_cols=21 Identities=19% Similarity=-0.002 Sum_probs=17.7
Q ss_pred CcEEEEecchHHHHHHHHHHh
Q 017180 169 SDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
..-.++|-|.|+.++..+|..
T Consensus 28 ~~~~i~GtSaGAi~aa~~a~g 48 (221)
T cd07210 28 EPSAISGTSAGALVGGLFASG 48 (221)
T ss_pred CceEEEEeCHHHHHHHHHHcC
Confidence 445789999999999999864
No 285
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=30.27 E-value=85 Score=24.64 Aligned_cols=36 Identities=11% Similarity=0.218 Sum_probs=23.3
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeC
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVD 130 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D 130 (376)
+.+|++-|..+++-...=+.+...|.+. |++|+.+|
T Consensus 2 g~vIwltGlsGsGKtTlA~~L~~~L~~~----g~~~~~LD 37 (156)
T PF01583_consen 2 GFVIWLTGLSGSGKTTLARALERRLFAR----GIKVYLLD 37 (156)
T ss_dssp -EEEEEESSTTSSHHHHHHHHHHHHHHT----TS-EEEEE
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHc----CCcEEEec
Confidence 4689999998333333344555666665 89999998
No 286
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=29.92 E-value=4.2e+02 Score=23.93 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=23.2
Q ss_pred CcEEEEecchHHHHHHHHHH-hCCCCcceEEEec-cC
Q 017180 169 SDLVIFGGGHAATLTVRAAK-KNLVKPTAIAAVA-PT 203 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~-~~p~~v~~lvl~~-p~ 203 (376)
+.=+++|-|.|+.++..+-. +.|+.-.++|.+- |.
T Consensus 303 eeGll~G~SSGan~~aAl~~a~~~en~~kliV~~~pd 339 (362)
T KOG1252|consen 303 EEGLLVGISSGANVAAALKLAKRPENAGKLIVVTFPD 339 (362)
T ss_pred hhCeeecccchHHHHHHHHHHhccccCCcEEEEECCC
Confidence 34578999999987765433 4566666676655 53
No 287
>PLN02748 tRNA dimethylallyltransferase
Probab=29.56 E-value=2.4e+02 Score=26.85 Aligned_cols=80 Identities=19% Similarity=0.292 Sum_probs=50.3
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeC----CCCCcC-CCC------------------CCCCCCH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVD----WPGLGY-SDR------------------PKMDYNA 146 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D----~~G~G~-S~~------------------~~~~~~~ 146 (376)
.+.||+|-|-. +++..= ++..|++.. +..||..| |+|.-- +.+ |...|+.
T Consensus 21 ~~~~i~i~Gpt--gsGKs~--la~~la~~~---~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv 93 (468)
T PLN02748 21 KAKVVVVMGPT--GSGKSK--LAVDLASHF---PVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTA 93 (468)
T ss_pred CCCEEEEECCC--CCCHHH--HHHHHHHhc---CeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcH
Confidence 45688888866 444432 445666642 46788888 444311 111 2367999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHH
Q 017180 147 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAA 180 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg 180 (376)
.++.++....|+.+.. .++..+|||.+.=-
T Consensus 94 ~~F~~~A~~~I~~I~~----rgk~PIlVGGTglY 123 (468)
T PLN02748 94 KDFRDHAVPLIEEILS----RNGLPVIVGGTNYY 123 (468)
T ss_pred HHHHHHHHHHHHHHHh----cCCCeEEEcChHHH
Confidence 9999999988887641 24567888877433
No 288
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=29.35 E-value=47 Score=28.62 Aligned_cols=15 Identities=13% Similarity=0.350 Sum_probs=12.4
Q ss_pred CCcEEEEecchHHHH
Q 017180 168 ESDLVIFGGGHAATL 182 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~i 182 (376)
...++++|||+|..=
T Consensus 234 i~~I~i~GhSl~~~D 248 (270)
T PF14253_consen 234 IDEIIIYGHSLGEVD 248 (270)
T ss_pred CCEEEEEeCCCchhh
Confidence 577999999999753
No 289
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=28.57 E-value=1.3e+02 Score=22.59 Aligned_cols=58 Identities=10% Similarity=0.046 Sum_probs=37.1
Q ss_pred EEEEEeCCCC---CCCHHHHHHHhcccCCce-EEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 315 LLVVSTEGSP---RRSKAEMEALKGAKGVTK-FVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 315 vlii~G~~D~---~~~~~~~~~~~~~~~~~~-~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
||-+||.--. .+..-.++.+....-+.. ++.+-.. |+++.++-+++.+.|.+|+.+..
T Consensus 55 VlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~hFP~~~~v~~Yk~~L~~~I~~~v 117 (127)
T PF06309_consen 55 VLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHHFPHNSNVDEYKEQLKSWIRGNV 117 (127)
T ss_pred EEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeecccccCCCchHHHHHHHHHHHHHHHHH
Confidence 4457776442 344444555433333333 4444556 99999999999999999998764
No 290
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=28.35 E-value=1e+02 Score=28.32 Aligned_cols=38 Identities=13% Similarity=0.194 Sum_probs=29.9
Q ss_pred EEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC
Q 017180 93 ILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD 138 (376)
Q Consensus 93 vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~ 138 (376)
|||+|... ...|+.++..|.+. |+.|.++-..+.+...
T Consensus 2 il~~~~~~----p~~~~~la~~L~~~----G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNF----PGQFRHLAPALAAQ----GHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCC----chhHHHHHHHHHHC----CCEEEEEecCCCCCCC
Confidence 89998754 26789999999997 9999988777766543
No 291
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=27.97 E-value=1.5e+02 Score=21.23 Aligned_cols=60 Identities=25% Similarity=0.218 Sum_probs=37.3
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINA 159 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~ 159 (376)
.++||++.+-.+-.+...| +..+.+..+ +-+++..|--|||-.... .....+.+.+++..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~---a~~~~~~l~--~s~lvt~~g~gHg~~~~~-----s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEG---ARAMAARLP--GSRLVTVDGAGHGVYAGG-----SPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHH---HHHHHHHCC--CceEEEEeccCcceecCC-----ChHHHHHHHHHHHc
Confidence 4689999998744555666 334444433 578888888899965311 12334455566654
No 292
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=27.94 E-value=79 Score=26.26 Aligned_cols=24 Identities=17% Similarity=-0.050 Sum_probs=19.6
Q ss_pred CCcEEEEecchHHHHHHHHHHhCC
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNL 191 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p 191 (376)
...-.++|.|.|+.+|..+|...+
T Consensus 25 ~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 25 IEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred CCCCEEEEECHHHHHHHHHHcCCc
Confidence 345678999999999999998643
No 293
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=27.85 E-value=96 Score=19.83 Aligned_cols=35 Identities=9% Similarity=0.112 Sum_probs=27.1
Q ss_pred cccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 336 GAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 336 ~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
+..|+. .+.+-+| ++...|.++++.+.|.+|-.+.
T Consensus 23 e~~PDT-vItL~~G~k~vV~Es~~eVi~ki~~y~~~i 58 (60)
T PF06289_consen 23 EETPDT-VITLTNGKKYVVKESVEEVIEKIIEYRRKI 58 (60)
T ss_pred EEcCCe-EEEEeCCCEEEEECCHHHHHHHHHHHHHhc
Confidence 445774 4455566 8899999999999999998765
No 294
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=27.66 E-value=1.6e+02 Score=24.35 Aligned_cols=40 Identities=18% Similarity=0.091 Sum_probs=33.2
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCCCC
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALL 351 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 351 (376)
.-|++++.|..+...+.+..+.+.++..+.-+..++++++
T Consensus 53 ~yP~ly~~g~~~~~~s~~e~~~Lr~Yl~~GGfl~~D~~~~ 92 (207)
T PF13709_consen 53 FYPFLYWPGHGDFPLSDEEIANLRRYLENGGFLLFDDRDC 92 (207)
T ss_pred hCCEEEEeCCCCCCCCHHHHHHHHHHHHcCCEEEEECCCc
Confidence 4599999999999888899999988887777788877643
No 295
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=27.61 E-value=1.5e+02 Score=25.86 Aligned_cols=48 Identities=13% Similarity=0.068 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEE
Q 017180 148 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAA 199 (376)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl 199 (376)
...+-+..+++.++.. ++..+.=+|..||+.. +.+|.++-..|-++.+
T Consensus 56 AQ~~k~~~~~~kl~L~---~G~~lLDiGCGWG~l~-~~aA~~y~v~V~GvTl 103 (283)
T COG2230 56 AQRAKLDLILEKLGLK---PGMTLLDIGCGWGGLA-IYAAEEYGVTVVGVTL 103 (283)
T ss_pred HHHHHHHHHHHhcCCC---CCCEEEEeCCChhHHH-HHHHHHcCCEEEEeeC
Confidence 3445566777888732 2444544999999954 5556666555555443
No 296
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=27.16 E-value=2.5e+02 Score=24.37 Aligned_cols=54 Identities=15% Similarity=0.211 Sum_probs=38.1
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC--CC-CCCCChHHHHHHHHHHHHhh
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA--LL-PQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~--H~-~~~e~pe~~~~~i~~fl~~~ 371 (376)
.+|+.++.|++ ...++.++..|+++++.++.+ ++ ..--.|++..+.|.+=.++.
T Consensus 147 gVPV~lVsGDd------~~~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~aa~~A 203 (270)
T cd08769 147 GVPVVLVAGDS------ELEKEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELREAVKEA 203 (270)
T ss_pred CCCEEEEecCH------HHHHHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHHHHHHHH
Confidence 88999999986 334555666799999999886 44 44455677766666655544
No 297
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=26.87 E-value=75 Score=27.55 Aligned_cols=33 Identities=9% Similarity=0.241 Sum_probs=27.5
Q ss_pred cEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeC
Q 017180 92 NILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVD 130 (376)
Q Consensus 92 ~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D 130 (376)
.||++|-.. .+......++..|.++ ||+++.++
T Consensus 232 ~IILmHd~~--~T~~aL~~iI~~Lk~k----Gy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTA--SSTEGLEEMITIIKEK----GYKIGTIT 264 (268)
T ss_pred cEEEEcCCc--cHHHHHHHHHHHHHHC----CCEEEeHH
Confidence 589999876 7777788899999987 99998764
No 298
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=26.77 E-value=5e+02 Score=23.89 Aligned_cols=87 Identities=14% Similarity=0.162 Sum_probs=57.5
Q ss_pred CcEEEecCCCCC-----ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCC
Q 017180 91 KNILMIPTISDV-----STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVS 165 (376)
Q Consensus 91 ~~vvllHG~~~~-----~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 165 (376)
-.||++||-..+ -+..+|..+++.+.++ -.+-.+|.--.|.-+ .+++-+..+..+++...
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r-----~lip~~D~AYQGF~~------GleeDa~~lR~~a~~~~---- 236 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKER-----GLIPFFDIAYQGFAD------GLEEDAYALRLFAEVGP---- 236 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc-----CCeeeeehhhhhhcc------chHHHHHHHHHHHHhCC----
Confidence 469999996533 3458999999999984 445556644444322 25666677777777753
Q ss_pred CCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 166 SSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
. .+|..|..=.++ .|-++|-++.+++.
T Consensus 237 ---~--~lva~S~SKnfg-----LYgERVGa~~vva~ 263 (396)
T COG1448 237 ---E--LLVASSFSKNFG-----LYGERVGALSVVAE 263 (396)
T ss_pred ---c--EEEEehhhhhhh-----hhhhccceeEEEeC
Confidence 1 667777654433 35668999999876
No 299
>PLN02661 Putative thiazole synthesis
Probab=26.17 E-value=1.3e+02 Score=27.38 Aligned_cols=32 Identities=28% Similarity=0.377 Sum_probs=22.5
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEec
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVA 201 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~ 201 (376)
.-.++++|....|..+...+.+.+.. +++++.
T Consensus 92 ~~DVlIVGaG~AGl~AA~~La~~~g~--kV~viE 123 (357)
T PLN02661 92 DTDVVIVGAGSAGLSCAYELSKNPNV--KVAIIE 123 (357)
T ss_pred cCCEEEECCHHHHHHHHHHHHHcCCC--eEEEEe
Confidence 34699999988888888877765432 455553
No 300
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=25.64 E-value=63 Score=24.34 Aligned_cols=26 Identities=19% Similarity=0.328 Sum_probs=16.6
Q ss_pred CCcEEEecCCCCCccchHh--HHHHHHHHh
Q 017180 90 SKNILMIPTISDVSTVEEW--RLVAQDIVQ 117 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~--~~~~~~L~~ 117 (376)
+|.|+-+||+. +++..| +-+++.|-.
T Consensus 52 KpLVlSfHG~t--GtGKn~v~~liA~~ly~ 79 (127)
T PF06309_consen 52 KPLVLSFHGWT--GTGKNFVSRLIAEHLYK 79 (127)
T ss_pred CCEEEEeecCC--CCcHHHHHHHHHHHHHh
Confidence 56666679999 766666 344455443
No 301
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=25.58 E-value=82 Score=26.40 Aligned_cols=33 Identities=15% Similarity=0.377 Sum_probs=26.3
Q ss_pred cEEEecCC-CCCccchHhHHHHHHHHhhhCCcceEEEEeC
Q 017180 92 NILMIPTI-SDVSTVEEWRLVAQDIVQRVGKVNWRATIVD 130 (376)
Q Consensus 92 ~vvllHG~-~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D 130 (376)
.||++|.. . .+......+++.|.++ ||+++.++
T Consensus 188 ~IiLlHd~~~--~t~~aL~~ii~~lk~~----Gy~fvtl~ 221 (224)
T TIGR02884 188 AILLLHAVSK--DNAEALDKIIKDLKEQ----GYTFKSLD 221 (224)
T ss_pred cEEEEECCCC--CHHHHHHHHHHHHHHC----CCEEEEhH
Confidence 59999974 4 4566788889999887 99998774
No 302
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=24.63 E-value=1.1e+02 Score=24.35 Aligned_cols=23 Identities=17% Similarity=-0.000 Sum_probs=18.6
Q ss_pred CCcEEEEecchHHHHHHHHHHhC
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKN 190 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~ 190 (376)
...-.++|-|.|+.++..++...
T Consensus 27 ~~~d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 27 IEIDIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred CCeeEEEEeCHHHHHHHHHHcCC
Confidence 34567899999999999998753
No 303
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=24.41 E-value=3.3e+02 Score=24.21 Aligned_cols=78 Identities=15% Similarity=0.259 Sum_probs=50.6
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeC----CCCCc-CCCCC------------------CCCCCH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVD----WPGLG-YSDRP------------------KMDYNA 146 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D----~~G~G-~S~~~------------------~~~~~~ 146 (376)
.+.+++|=|=. +++..- ++-.|+++. +-.||..| |+|.- .|.+| ...|+.
T Consensus 2 ~~~~i~I~GPT--AsGKT~--lai~LAk~~---~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa 74 (308)
T COG0324 2 KPKLIVIAGPT--ASGKTA--LAIALAKRL---GGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSA 74 (308)
T ss_pred CccEEEEECCC--CcCHHH--HHHHHHHHc---CCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccH
Confidence 35678887755 444443 445677653 57899998 45542 12233 257899
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcEEEEecch
Q 017180 147 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGH 178 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~ 178 (376)
.++.++....++.... .++-.+|||.|+
T Consensus 75 ~~f~~~a~~~i~~i~~----rgk~pIlVGGTg 102 (308)
T COG0324 75 AEFQRDALAAIDDILA----RGKLPILVGGTG 102 (308)
T ss_pred HHHHHHHHHHHHHHHh----CCCCcEEEccHH
Confidence 9999999888887641 245678888775
No 304
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=23.98 E-value=90 Score=24.62 Aligned_cols=52 Identities=6% Similarity=0.057 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 147 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
+...+.+.++++.+.. ...++++.|.|..|...+.++...++.+..++=.+|
T Consensus 51 ~~~~~~l~~~L~~~~~----~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 51 EQSKAELREFLEKLKA----EGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHHH----TT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHHH----cCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 3444455566555431 267799999999999999998876777777665565
No 305
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=23.97 E-value=1.1e+02 Score=24.18 Aligned_cols=21 Identities=14% Similarity=0.014 Sum_probs=17.6
Q ss_pred CcEEEEecchHHHHHHHHHHh
Q 017180 169 SDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
..-.++|-|.|+.+|..++..
T Consensus 28 ~~d~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 28 PIDIVSGTSAGAIVGALYAAG 48 (175)
T ss_pred CeeEEEEECHHHHHHHHHHcC
Confidence 345789999999999999864
No 306
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=23.63 E-value=1.1e+02 Score=27.58 Aligned_cols=19 Identities=16% Similarity=-0.164 Sum_probs=15.6
Q ss_pred cEEEEecchHHHHHHHHHH
Q 017180 170 DLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~ 188 (376)
+-.++|||+|=..|+.++.
T Consensus 125 ~~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 125 VDVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CCeeeeccHHHHHHHHHhC
Confidence 3468999999988888775
No 307
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=23.35 E-value=2.5e+02 Score=21.33 Aligned_cols=15 Identities=27% Similarity=0.532 Sum_probs=10.8
Q ss_pred HHHHHHhhhCCcceEEEEe
Q 017180 111 VAQDIVQRVGKVNWRATIV 129 (376)
Q Consensus 111 ~~~~L~~~~~~~~~~Vi~~ 129 (376)
.+..|.+. |++|+++
T Consensus 100 ~~~~L~~~----GwrvlvV 114 (150)
T COG3727 100 DIKRLQQL----GWRVLVV 114 (150)
T ss_pred HHHHHHHc----CCeEEEE
Confidence 45666665 9999875
No 308
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=22.33 E-value=1.9e+02 Score=28.65 Aligned_cols=45 Identities=20% Similarity=0.367 Sum_probs=26.9
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCC--CCcCCC
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWP--GLGYSD 138 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~--G~G~S~ 138 (376)
+.|+|+|||..+. ....+-..+...|... |..|-..=+| ||+.+.
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~----g~~~~~~~~p~e~H~~~~ 598 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRK----GKPVELVVFPDEGHGFSR 598 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHc----CceEEEEEeCCCCcCCCC
Confidence 5689999997732 2234445566677664 6555555444 555554
No 309
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=22.09 E-value=5.9e+02 Score=22.94 Aligned_cols=100 Identities=9% Similarity=-0.041 Sum_probs=54.0
Q ss_pred CCcEEEecCCCCCccchHhHH---HHHHHHhhhCCcceEEEEeCCCCCcCCC-CCC---------------CCCCHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRL---VAQDIVQRVGKVNWRATIVDWPGLGYSD-RPK---------------MDYNADVME 150 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~---~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~---------------~~~~~~~~~ 150 (376)
+..|+++-|....-...-+.. +...|.+. .+-+++++=-+|.|--. ... ...+....+
T Consensus 31 k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~---d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI 107 (423)
T COG3673 31 KRLVFCFDGTWNRFGAQPPTNVVLLYASLQRA---DGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNI 107 (423)
T ss_pred ceEEEEecCchhhcCCCCcchHHHHHHHHhcC---CCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 446777777541111222222 33333331 26888888888887542 100 011111111
Q ss_pred HHH-HHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEec
Q 017180 151 KFV-VDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVA 201 (376)
Q Consensus 151 ~~l-~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~ 201 (376)
... .-+++... +++.|+++|+|-|+.+|--+|.. +..+-|++
T Consensus 108 ~~AYrFL~~~ye-----pGD~Iy~FGFSRGAf~aRVlagm----ir~vGlls 150 (423)
T COG3673 108 REAYRFLIFNYE-----PGDEIYAFGFSRGAFSARVLAGM----IRHVGLLS 150 (423)
T ss_pred HHHHHHHHHhcC-----CCCeEEEeeccchhHHHHHHHHH----HHHhhhhc
Confidence 112 22345554 57899999999999999988873 44444443
No 310
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=22.08 E-value=92 Score=25.51 Aligned_cols=64 Identities=13% Similarity=0.104 Sum_probs=34.1
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhC
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINA 159 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~ 159 (376)
.+|++++||..+. ....+=..+...|.+... ...++.+.--|||..... ...++.+.+.+++++
T Consensus 144 ~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~--~~~~~~~p~~gH~~~~~~----~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 144 KPPVLIIHGENDPRVPPSQSLRLYNALRKAGK--PVELLIFPGEGHGFGNPE----NRRDWYERILDFFDK 208 (213)
T ss_dssp GSEEEEEEETTBSSSTTHHHHHHHHHHHHTTS--SEEEEEETT-SSSTTSHH----HHHHHHHHHHHHHHH
T ss_pred CCCEEEEccCCCCccCHHHHHHHHHHHHhcCC--CEEEEEcCcCCCCCCCch----hHHHHHHHHHHHHHH
Confidence 6789999998722 122334455666766411 256666666667654321 122444455555543
No 311
>COG1598 Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=21.56 E-value=2.2e+02 Score=18.91 Aligned_cols=29 Identities=14% Similarity=0.145 Sum_probs=18.3
Q ss_pred ceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHH
Q 017180 123 NWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDL 156 (376)
Q Consensus 123 ~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~ 156 (376)
+|-+..+|+||+=. ...|.++..+.+.+.
T Consensus 15 ~y~~~~Pdlpgc~s-----~G~T~eea~~n~~ea 43 (73)
T COG1598 15 GYVASVPDLPGCHS-----QGETLEEALQNAKEA 43 (73)
T ss_pred CEEEEeCCCCCccc-----cCCCHHHHHHHHHHH
Confidence 79999999999842 223445544444433
No 312
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=21.50 E-value=1.4e+02 Score=26.62 Aligned_cols=18 Identities=17% Similarity=0.097 Sum_probs=15.6
Q ss_pred EEEEecchHHHHHHHHHH
Q 017180 171 LVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~ 188 (376)
=.+.|-|+||.+|+.++.
T Consensus 34 D~i~GTStGgiIA~~la~ 51 (312)
T cd07212 34 DWIAGTSTGGILALALLH 51 (312)
T ss_pred cEEEeeChHHHHHHHHHc
Confidence 356799999999999987
No 313
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=21.21 E-value=1.6e+02 Score=26.19 Aligned_cols=97 Identities=9% Similarity=0.053 Sum_probs=53.9
Q ss_pred cEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcE
Q 017180 92 NILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDL 171 (376)
Q Consensus 92 ~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~ 171 (376)
+++++-- +-+..|..+-+.+..+ ++.-.-.=|+-||.--..-.....+.....+..++..+. ..++
T Consensus 215 pvfYvSn----SPw~~f~~L~efi~~~----~~P~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil~~~p------~~kf 280 (373)
T COG4850 215 PVFYVSN----SPWQLFPTLQEFITNR----NFPYGPLLLRRWGGVLDNIIESGAARKGQSLRNILRRYP------DRKF 280 (373)
T ss_pred CeEEecC----ChhHhHHHHHHHHhcC----CCCCCchhHhhcCCcccccccchhhhcccHHHHHHHhCC------CceE
Confidence 5666643 3345566666666654 455444445555522111112222333445665666764 7899
Q ss_pred EEEecchHH--HHHHHHHHhCCCCcceEEEecc
Q 017180 172 VIFGGGHAA--TLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 172 ~lvG~S~Gg--~ia~~~a~~~p~~v~~lvl~~p 202 (376)
+|||-|=== -|=..++..+|.+|.++.+=+-
T Consensus 281 vLVGDsGE~DpeIYae~v~~fP~RIl~I~IRdv 313 (373)
T COG4850 281 VLVGDSGEHDPEIYAEMVRCFPNRILGIYIRDV 313 (373)
T ss_pred EEecCCCCcCHHHHHHHHHhCccceeeEeeeec
Confidence 999976321 2333455689999998876543
No 314
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=21.11 E-value=1.2e+02 Score=25.33 Aligned_cols=29 Identities=10% Similarity=0.152 Sum_probs=21.6
Q ss_pred cEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCC
Q 017180 92 NILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDW 131 (376)
Q Consensus 92 ~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~ 131 (376)
.=||+.|-| .+.. +..|+++ ||+|+.+|+
T Consensus 39 ~rvLvPgCG--~g~D-----~~~La~~----G~~VvGvDl 67 (218)
T PF05724_consen 39 GRVLVPGCG--KGYD-----MLWLAEQ----GHDVVGVDL 67 (218)
T ss_dssp EEEEETTTT--TSCH-----HHHHHHT----TEEEEEEES
T ss_pred CeEEEeCCC--ChHH-----HHHHHHC----CCeEEEEec
Confidence 368888877 5543 3467776 999999998
No 315
>cd01985 ETF The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=20.95 E-value=2.5e+02 Score=22.40 Aligned_cols=62 Identities=21% Similarity=0.385 Sum_probs=40.1
Q ss_pred EEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEec-chHHHHHHHHHHh-CCCCcceEEEe
Q 017180 125 RATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGG-GHAATLTVRAAKK-NLVKPTAIAAV 200 (376)
Q Consensus 125 ~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~-S~Gg~ia~~~a~~-~p~~v~~lvl~ 200 (376)
+|+.++-+.+ ..+..+.+++.|.+++++.+ -.++|+|+ +.|+.++-++|.+ .-..+..++-+
T Consensus 62 ~v~~~~~~~~-------~~~~~~~~a~~l~~~i~~~~-------p~~Vl~g~t~~g~~la~rlA~~L~~~~vsdv~~l 125 (181)
T cd01985 62 KVLLVEDPAL-------AGYDPEATAKALAALIKKEK-------PDLILAGATSIGKQLAPRVAALLGVPQISDVTKL 125 (181)
T ss_pred EEEEEecCcc-------cCCChHHHHHHHHHHHHHhC-------CCEEEECCcccccCHHHHHHHHhCCCcceeEEEE
Confidence 6777765433 34667889999999998763 45788876 5566777777774 22234444443
No 316
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=20.68 E-value=2.1e+02 Score=22.36 Aligned_cols=48 Identities=15% Similarity=0.227 Sum_probs=32.7
Q ss_pred eEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHH
Q 017180 124 WRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRA 186 (376)
Q Consensus 124 ~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~ 186 (376)
-.||++|-+|-- ++.+++++.+..+...- .+-++++|.+.|-.-.+.-
T Consensus 66 ~~~i~LDe~Gk~--------~sS~~fA~~l~~~~~~g-------~~i~FvIGGa~G~~~~v~~ 113 (153)
T TIGR00246 66 AHVVTLDIPGKP--------WTTPQLADTLEKWKTDG-------RDVTLLIGGPEGLSPTCKA 113 (153)
T ss_pred CeEEEEcCCCCc--------CCHHHHHHHHHHHhccC-------CeEEEEEcCCCcCCHHHHH
Confidence 469999998753 55677888887774332 2347778998886555443
No 317
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=20.39 E-value=54 Score=30.62 Aligned_cols=26 Identities=8% Similarity=0.005 Sum_probs=20.4
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCc
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKP 194 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v 194 (376)
.+-++.|-|.|+.+|..++...++.+
T Consensus 101 ~p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 101 LPRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred CCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 34578999999999999998655443
No 318
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=20.32 E-value=1.4e+02 Score=25.77 Aligned_cols=23 Identities=9% Similarity=-0.139 Sum_probs=18.8
Q ss_pred cEEEEecchHHHHHHHHHHhCCC
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLV 192 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~ 192 (376)
.-.++|-|.|+.++..++.....
T Consensus 28 fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 28 FDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred CCEEEEECHHHHhHHHHHhCCcc
Confidence 34789999999999999885443
No 319
>PRK13533 7-cyano-7-deazaguanine tRNA-ribosyltransferase; Provisional
Probab=20.21 E-value=6.3e+02 Score=24.25 Aligned_cols=79 Identities=13% Similarity=0.156 Sum_probs=52.9
Q ss_pred EEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEE
Q 017180 93 ILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLV 172 (376)
Q Consensus 93 vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~ 172 (376)
+-.++| | ......+.-+..+.+. +|..+++ |........|..+++.+.+......+. ...+.+
T Consensus 161 ~giVQG-g--~~~dLR~~sa~~l~~~----~f~gyaI-----Ggl~~~~e~y~~~~~~~ii~~~~~~Lp-----~dkPry 223 (487)
T PRK13533 161 VAPVQG-G--TYPDLREESAREASKL----GFDVYPI-----GAVVPLMERYRYDDLVDVVLAAKRGLG-----PGAPVH 223 (487)
T ss_pred EEEecC-C--CCHHHHHHHHHHHHhC----CCCEEEE-----cCcccccccCCHHHHHHHHHHHHhhCC-----CCCceE
Confidence 334577 3 4556666777788875 6776663 332222244677888888888888875 467899
Q ss_pred EEecchHHHHHHHHHH
Q 017180 173 IFGGGHAATLTVRAAK 188 (376)
Q Consensus 173 lvG~S~Gg~ia~~~a~ 188 (376)
++|...=-.++...+.
T Consensus 224 L~GvG~P~~i~~~V~l 239 (487)
T PRK13533 224 LFGAGHPMMFALAVAL 239 (487)
T ss_pred EeCCCCHHHHHHHHHh
Confidence 9998877777666554
No 320
>COG0746 MobA Molybdopterin-guanine dinucleotide biosynthesis protein A [Coenzyme metabolism]
Probab=20.12 E-value=4.8e+02 Score=21.23 Aligned_cols=70 Identities=13% Similarity=0.021 Sum_probs=50.9
Q ss_pred HHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccC---CceEEEeCCC--CCCCCCChHHHHHHHHHHHHhhc
Q 017180 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG---VTKFVEVPGA--LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 301 ~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~--H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
.+...+... ..+.+++.+-+-+.++.+....+..... ..-+...+++ |-.+--.+..+.+.+.+++.+..
T Consensus 77 Gi~~al~~~--~~~~~~v~~~D~P~i~~~lv~~l~~~~~~~~~~~~~~~~~g~~~Pl~aly~~~l~~~l~~~l~~g~ 151 (192)
T COG0746 77 GILAALRHF--GTEWVLVLPCDMPFIPPELVERLLSAFKQTGAAIVPAHDDGRLEPLFALYHRALLPALEEYLAKGE 151 (192)
T ss_pred HHHHHHHhC--CCCeEEEEecCCCCCCHHHHHHHHHhhcccCCcEEEeCCCCceeeEEEEehHHHHHHHHHHHHhCC
Confidence 356667777 7789999999899999999999865443 3445555565 55444457889999999998653
No 321
>PHA02114 hypothetical protein
Probab=20.07 E-value=1.3e+02 Score=21.21 Aligned_cols=32 Identities=9% Similarity=0.208 Sum_probs=27.1
Q ss_pred cEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEe
Q 017180 92 NILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIV 129 (376)
Q Consensus 92 ~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~ 129 (376)
+||+=-.+. .+..-|-.++..|.+. ||+|++-
T Consensus 84 tivldvn~a--msr~pwi~v~s~le~~----g~~vvat 115 (127)
T PHA02114 84 TIVLDVNYA--MSRAPWIKVISRLEEA----GFNVVAT 115 (127)
T ss_pred eEEEEehhh--hccCcHHHHHHHHHhc----Cceeeeh
Confidence 477777777 8889999999999997 9999984
Done!