Query 017183
Match_columns 376
No_of_seqs 130 out of 1368
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 10:17:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017183.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017183hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ix5_A Acyl-coenzyme A oxidase 100.0 1.1E-67 3.8E-72 510.4 40.8 372 2-376 63-436 (436)
2 3sf6_A Glutaryl-COA dehydrogen 100.0 2.9E-67 9.9E-72 504.0 40.0 362 2-365 38-402 (403)
3 3swo_A Glutaryl-COA dehydrogen 100.0 2.7E-67 9.1E-72 503.8 39.1 364 2-367 34-399 (399)
4 3p4t_A Putative acyl-COA dehyd 100.0 1.7E-66 5.8E-71 498.7 40.6 362 2-364 34-403 (403)
5 2dvl_A Acyl-COA dehydrogenase; 100.0 1.8E-66 6.1E-71 493.7 39.9 358 2-361 11-372 (372)
6 1r2j_A Protein FKBI; polyketid 100.0 5.7E-67 2E-71 496.0 36.1 355 6-363 6-365 (366)
7 2d29_A Acyl-COA dehydrogenase; 100.0 4.4E-66 1.5E-70 493.6 41.8 361 2-362 15-386 (387)
8 3ii9_A Glutaryl-COA dehydrogen 100.0 1.8E-67 6.2E-72 504.5 31.8 363 3-365 28-395 (396)
9 3pfd_A Acyl-COA dehydrogenase; 100.0 2E-66 6.7E-71 496.8 38.1 359 2-361 27-393 (393)
10 1ukw_A Acyl-COA dehydrogenase; 100.0 3.9E-66 1.3E-70 492.6 39.7 359 2-361 13-378 (379)
11 2eba_A Putative glutaryl-COA d 100.0 4.4E-66 1.5E-70 493.2 39.9 362 2-364 19-384 (385)
12 3r7k_A Probable acyl COA dehyd 100.0 7E-66 2.4E-70 494.4 39.2 358 2-359 37-401 (403)
13 3nf4_A Acyl-COA dehydrogenase; 100.0 5E-66 1.7E-70 493.3 37.7 359 2-361 24-387 (387)
14 1egd_A Medium chain acyl-COA d 100.0 1.3E-65 4.4E-70 491.6 39.7 360 2-362 24-393 (396)
15 1buc_A Butyryl-COA dehydrogena 100.0 1.2E-65 4E-70 490.1 39.1 360 2-361 13-383 (383)
16 2vig_A Short-chain specific ac 100.0 1.2E-65 4E-70 491.2 39.0 361 2-362 14-381 (391)
17 2jif_A Short/branched chain sp 100.0 2.7E-65 9.1E-70 490.2 41.1 359 2-361 37-402 (404)
18 2pg0_A Acyl-COA dehydrogenase; 100.0 5.3E-65 1.8E-69 485.8 40.7 356 2-359 18-383 (385)
19 1ivh_A Isovaleryl-COA dehydrog 100.0 1.5E-65 5.1E-70 490.9 36.7 360 2-361 21-391 (394)
20 1rx0_A Acyl-COA dehydrogenase 100.0 8.1E-65 2.8E-69 485.5 40.5 359 2-361 27-392 (393)
21 1siq_A GCD, glutaryl-COA dehyd 100.0 7.9E-65 2.7E-69 485.7 38.4 363 2-365 22-388 (392)
22 3mpi_A Glutaryl-COA dehydrogen 100.0 7.5E-65 2.6E-69 486.8 33.7 361 2-365 13-387 (397)
23 4hr3_A Putative acyl-COA dehyd 100.0 5E-64 1.7E-68 483.7 33.4 361 2-362 17-411 (415)
24 3owa_A Acyl-COA dehydrogenase; 100.0 1.6E-63 5.6E-68 496.5 35.9 359 2-362 41-425 (597)
25 2z1q_A Acyl-COA dehydrogenase; 100.0 1.7E-62 5.9E-67 489.3 35.1 358 3-362 37-415 (577)
26 3mkh_A Nitroalkane oxidase; ox 100.0 1.4E-61 4.7E-66 469.8 31.5 368 2-372 15-426 (438)
27 2uxw_A VERY-long-chain specifi 100.0 7.3E-61 2.5E-65 478.7 36.0 351 6-358 63-427 (607)
28 2c12_A Nitroalkane oxidase; ox 100.0 2.3E-60 7.9E-65 461.2 36.1 365 2-368 14-425 (439)
29 2wbi_A Acyl-COA dehydrogenase 100.0 1E-59 3.5E-64 454.9 32.8 359 2-362 31-419 (428)
30 2rfq_A 3-HSA hydroxylase, oxyg 100.0 2.9E-59 1E-63 447.7 32.0 350 2-367 13-392 (394)
31 3mxl_A Nitrososynthase; flavin 100.0 2.6E-59 8.8E-64 448.3 29.0 352 2-363 17-395 (395)
32 2jbr_A P-hydroxyphenylacetate 100.0 9.4E-59 3.2E-63 447.7 29.0 350 2-367 41-420 (422)
33 2or0_A Hydroxylase; APC7385, r 100.0 1E-58 3.5E-63 446.5 28.6 349 2-366 26-406 (414)
34 3m9v_A FAD-dependent oxidoredu 100.0 1.7E-57 5.8E-62 441.2 31.9 354 2-365 28-408 (439)
35 3djl_A Protein AIDB; alpha hel 100.0 4.8E-51 1.6E-55 401.9 31.2 328 25-364 88-444 (541)
36 1w07_A Acyl-COA oxidase; oxido 100.0 5.7E-51 1.9E-55 411.3 28.9 334 22-363 56-442 (659)
37 2ddh_A Acyl-COA oxidase; beta 100.0 2.5E-48 8.4E-53 391.5 30.5 315 43-362 75-438 (661)
38 1u8v_A Gamma-aminobutyrate met 100.0 6.6E-38 2.2E-42 305.0 26.7 249 82-338 118-404 (490)
39 2yyk_A 4-hydroxyphenylacetate- 100.0 3.2E-37 1.1E-41 299.7 26.3 263 89-361 122-424 (481)
40 3hwc_A Chlorophenol-4-monooxyg 100.0 5.3E-32 1.8E-36 262.8 26.3 234 87-327 127-391 (515)
41 4g5e_A 2,4,6-trichlorophenol 4 100.0 1.4E-26 4.8E-31 225.1 24.9 242 91-339 134-402 (517)
42 3owa_A Acyl-COA dehydrogenase; 94.7 0.24 8.3E-06 49.0 11.9 110 253-364 482-594 (597)
43 2uxw_A VERY-long-chain specifi 84.4 18 0.00061 35.6 14.2 97 253-369 506-603 (607)
44 2z1q_A Acyl-COA dehydrogenase; 72.5 71 0.0024 31.0 14.2 104 254-365 469-573 (577)
No 1
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=100.00 E-value=1.1e-67 Score=510.42 Aligned_cols=372 Identities=83% Similarity=1.323 Sum_probs=345.9
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCCCCHHHHHHHHhcCCccCcccccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhhH
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSL 79 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~~ 79 (376)
++.+ +|++ ++.|...+.++++.+|++.|++|++.||+++.+++|||.|+++.+...++|+++++|+++++.+.+|..+
T Consensus 63 ~~~~r~f~~~~~~p~~~~~~~~~~~p~~~~~~l~e~Gl~~l~~pe~GG~G~~~~~~~~v~eela~~~~~~~~~~~~~~~~ 142 (436)
T 2ix5_A 63 RKKVRECMEKEVAPIMTEYWEKAEFPFHITPKLGAMGVAGGSIKGYGCPGLSITANAIATAEIARVDASCSTFILVHSSL 142 (436)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHTCCCGGGHHHHHTTTCTTTTCCSTTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhCChhhHHHHhcCCCCHHHHHHHHHcCCCcCcCCCCCCCCCCHHHHHHHHHHHHhhCccHHHHHHhHHHH
Confidence 3445 7887 7888888888889999999999999999999777999999999999999999999999998877777656
Q ss_pred HHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEEeC
Q 017183 80 AMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 159 (376)
Q Consensus 80 ~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~~~ 159 (376)
+..+|..+|+++||++|++.+.+|+.++++++|||+.|||+..+.|+|++++|||+|||+|.|+||+..||+++|+|+++
T Consensus 143 ~~~~l~~~gt~~qk~~~l~~l~~G~~~~a~a~tEp~~GSd~~~~~t~A~~~gdg~vLnG~K~~is~a~~Ad~~lv~Ar~~ 222 (436)
T 2ix5_A 143 GMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKVEGGWKINGQKRWIGNSTFADLLIIFARNT 222 (436)
T ss_dssp HHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEET
T ss_pred HHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCcccceEEEEEeCCEEEEeeeccCCCCCcccCEEEEEEEEC
Confidence 77888999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCCCcHHHHHHHhhHhHHHHHHHHHHHHHHH
Q 017183 160 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGV 239 (376)
Q Consensus 160 ~~~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~~~~~~~~~~~~~~rl~~aa~~lG~~~~~ 239 (376)
+++++++|+||.+.|||++.+.|+++|+++++++++.|+||+||++++++..+++......+...|+.+++.++|+++++
T Consensus 223 ~~~~~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~g~~~~~~~l~~~r~~~aa~~~G~a~~a 302 (436)
T 2ix5_A 223 TTNQINGFIVKKDAPGLKATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGI 302 (436)
T ss_dssp TTSSEEEEEEETTCTTEEEEECCCBSSSTTSCEEEEEEEEEEEEGGGBCTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEECCCCCeEeeccccccCCCcCCceeEEeccEEECHHHcCCccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54678999999999999999999999999999999999999999999998777788888889999999999999999999
Q ss_pred HHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhhHHHHHHHHHHHHHHHHHHH
Q 017183 240 YDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGREL 319 (376)
Q Consensus 240 l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~a~~~~~~~~~~ 319 (376)
++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+......++++|.++++.+.++++.++|+
T Consensus 303 l~~a~~ya~~R~qfG~pi~~~q~vq~~la~~~~~~~aar~l~~~aa~~~d~g~~~~~~as~aK~~a~e~a~~v~~~a~q~ 382 (436)
T 2ix5_A 303 YDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQMTPGQASLGKAWISSKARETASLGREL 382 (436)
T ss_dssp HHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCeeCCcchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999887666778999999999999999999999
Q ss_pred hCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhcccCCCCccccccccC
Q 017183 320 LGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTGIASFKPVALATRSRL 376 (376)
Q Consensus 320 ~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~ 376 (376)
+||.||..+++++|+|||++...+++|++++++..|++.++|+|.+. +..+|||
T Consensus 383 ~Gg~G~~~e~~l~r~~Rda~~~~i~~Gt~ei~~~~iar~llgl~~~~---~~~~~~~ 436 (436)
T 2ix5_A 383 LGGNGILADFLVAKAFCDLEPIYTYEGTYDINTLVTGREVTGIASFK---PATRSRL 436 (436)
T ss_dssp TGGGGGBGGGSHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHSCCCCS---CC-----
T ss_pred hCccccccCChHHHHHHHhhcceeecCHHHHHHHHHHHHHhCCcccc---chhhccC
Confidence 99999999999999999999999999999999999999999998775 5666765
No 2
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=100.00 E-value=2.9e-67 Score=504.04 Aligned_cols=362 Identities=33% Similarity=0.589 Sum_probs=346.2
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCCCC-HHHHHHHHhcCCccCcccccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhh
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAEFP-FHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 78 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~~~-~~~~~~l~~~Gl~~~~~~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~ 78 (376)
++.+ +|++ ++.|.+.+.|+++.+| +++|++|++.||+++.+++|||.|+++.+.+.++|+++++|+++++.+.+|..
T Consensus 38 ~~~~r~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~Gl~~l~~~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~ 117 (403)
T 3sf6_A 38 RDTVRSVVQRRIKPHIASWYEDGELPARELAVELGELGLLGMHLKGYGCAGMSAVAYGLACLELEAGDSGIRSLVSVQGS 117 (403)
T ss_dssp HHHHHHHHHHHTTTTHHHHHHHTCCCHHHHHHHHHHTTCSSTTSCSTTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChhHHHHHhcCCCCHHHHHHHHHHCCCCcccchhhCCCCCCHHHHHHHHHHHHHhcccHHHHHHHhhh
Confidence 4455 8888 7999999999999999 99999999999999855999999999999999999999999999988888876
Q ss_pred HHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEEe
Q 017183 79 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 158 (376)
Q Consensus 79 ~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~~ 158 (376)
++...+..+|+++||++|++.+.+|+.++++++|||++|||+..+.|+|++++|||+|||+|.|+||+..||+++|+|++
T Consensus 118 ~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~ar~ 197 (403)
T 3sf6_A 118 LAMYAIHAFGSDEQKDQWLPDMASGHRIGCFGLTEPDHGSDPAGMRTRATRSGDDWILTGTKMWITNGSVADVAVVWART 197 (403)
T ss_dssp THHHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETGGGCSEEEEEEEE
T ss_pred hHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEEccCCCCCCchhcEEEEEEECCEEEEEEEEEeecCCcccCEEEEEEEe
Confidence 67788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCCCcHHHHHHHhhHhHHHHHHHHHHHHHH
Q 017183 159 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMG 238 (376)
Q Consensus 159 ~~~~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~~~~~~~~~~~~~~rl~~aa~~lG~~~~ 238 (376)
+ +++++|+||.+.|||++.+.|+++|++++++++|+|+||+||+++++|..+++......+..+|+.+++.++|++++
T Consensus 198 ~--~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~~~g~~~~~~~l~~~r~~~aa~~~G~a~~ 275 (403)
T 3sf6_A 198 D--EGIRGFVVPTDTPGFTANTIKSKMSLRASVTSELVLDGVRLPDSARLPGATSLGAPLRCLNEARFGIVFGALGAARD 275 (403)
T ss_dssp T--TEEEEEEEETTSTTEEEEECCSCSSCTTSCEEEEEEEEEEEEGGGBCTTCCSTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C--CceEEEEEECCCCCeEecCCCCccCCCCCceeEEEEccEEEcHHHccCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7 46999999999999999999999999999999999999999999999886778888899999999999999999999
Q ss_pred HHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhhHHHHHHHHHHHHHHHHHH
Q 017183 239 VYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRE 318 (376)
Q Consensus 239 ~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~a~~~~~~~~~ 318 (376)
+++.+++|+++|++||+|++++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.++++.++|
T Consensus 276 al~~a~~ya~~R~~fg~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~v~~~a~q 355 (403)
T 3sf6_A 276 CLETALAYACSREQFDRPIGGFQLTQQKLADMTLEYGKGFLLALHLGRQKDAGELAPEQVSLGKLNNVREAIEIARTART 355 (403)
T ss_dssp HHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCcccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998877888999999999999999999999
Q ss_pred HhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhcccCC
Q 017183 319 LLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTGIASF 365 (376)
Q Consensus 319 ~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~~~ 365 (376)
+|||.||.++++++|+|||++...+++|++++++..|++.++|+|++
T Consensus 356 ~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~llgl~~~ 402 (403)
T 3sf6_A 356 VLGASGITGEYPVMRHANNLESVLTYEGTSEMHTLIIGQALTGVGAF 402 (403)
T ss_dssp HHGGGGGSTTSSHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHSCCCC
T ss_pred hcCCeEccccCcHHHHHhhcccceeecCHHHHHHHHHHHHHhCcccc
Confidence 99999999999999999999999999999999999999999999875
No 3
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=100.00 E-value=2.7e-67 Score=503.83 Aligned_cols=364 Identities=31% Similarity=0.551 Sum_probs=346.6
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCCCCHHHHHHHHhcCCccCcccccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhhH
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSL 79 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~~ 79 (376)
++.+ +|++ ++.|.+.+.|+++.+|+++|++|++.||+++.+++|||.|+++.+.+.++|+++++|+++++.+.+|..+
T Consensus 34 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~ 113 (399)
T 3swo_A 34 AATVRQFVDTRLKPNVEGWFESATLPSELAKEFGNLGVLGMHLQGYGCAGTNAVSYGLACMELEAGDSGFRSFVSVQGSL 113 (399)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHTCCCTTHHHHHHHHTCTTTTSCSTTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhCChhHHHHHhhCCCCHHHHHHHHHCCCCcCChhhhCCCCCCHHHHHHHHHHHHHhCccHHHHHHHHhhh
Confidence 3455 8888 6999999999999999999999999999998559999999999999999999999999998888888667
Q ss_pred HHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEEeC
Q 017183 80 AMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 159 (376)
Q Consensus 80 ~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~~~ 159 (376)
+...+..+|+++||++|++.+.+|+.++++++|||++|+|+..+.|+|++++|||+|||+|.|+|++..||+++|+|+++
T Consensus 114 ~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~ 193 (399)
T 3swo_A 114 SMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGTKMWITNGNLADVATVWAQTD 193 (399)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEBCT
T ss_pred hhhHHHhcCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCCccceEEEEEeCCEEEEEEEEEeECCCCccCEEEEEEEeC
Confidence 77889999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCCCcHHHHHHHhhHhHHHHHHHHHHHHHHH
Q 017183 160 TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGV 239 (376)
Q Consensus 160 ~~~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~~~~~~~~~~~~~~rl~~aa~~lG~~~~~ 239 (376)
+++++|+||.+.|||++.+.|+++|+++++++++.|+||+||+++++|..+++......+..+|+.+++.++|+++++
T Consensus 194 --~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~~~g~~~~~~~l~~~r~~~aa~~~G~a~~a 271 (399)
T 3swo_A 194 --DGIRGFLVPTDTPGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPLAEGLSAPLSCLNEARFGIVFGALGAARDS 271 (399)
T ss_dssp --TSCEEEEEETTSTTEEEEECCCBSSCCSSCEEEEEEEEEEECGGGBCTTCCSTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CceEEEEEeCCCCCeEeecCcCcccCCCCceeEEEEccEEEcHHHcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999998867788888899999999999999999999
Q ss_pred HHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhhHHHHHHHHHHHHHHHHHHH
Q 017183 240 YDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGREL 319 (376)
Q Consensus 240 l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~a~~~~~~~~~~ 319 (376)
++.+++|+++|++||+||+++|.+|++|++|..+++++|++++++++.++.+.+....++++|.++++.+.++++.++|+
T Consensus 272 l~~a~~~a~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~ 351 (399)
T 3swo_A 272 LETTIAYTQSREVFDKPLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQISLGKLNNVREAIAIARECRTL 351 (399)
T ss_dssp HHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCeeCCcchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999987777889999999999999999999999
Q ss_pred hCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhcccCCCC
Q 017183 320 LGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTGIASFKP 367 (376)
Q Consensus 320 ~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~~~~~ 367 (376)
+||.||..+++++|+|||++...+++|++++++..|++.++|+|++.|
T Consensus 352 ~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~llg~p~~~~ 399 (399)
T 3swo_A 352 LGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGKALTGKAAFRS 399 (399)
T ss_dssp HGGGGGBSSSTHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHSCCCCC-
T ss_pred hCcccccCCCcHHHHHHHhhcceeecCHHHHHHHHHHHHHcCcccccC
Confidence 999999999999999999999999999999999999999999998754
No 4
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=100.00 E-value=1.7e-66 Score=498.74 Aligned_cols=362 Identities=21% Similarity=0.283 Sum_probs=343.3
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCch-hHHHHHhh
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASC-STFILVHS 77 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~-~~~~~~~~ 77 (376)
++.+ +|++ ++.|.+.+.|+++.+|+++|++|++.||+++.+ ++|||.|+++.+.+.++|+++++|+++ ++.+..|.
T Consensus 34 ~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~ 113 (403)
T 3p4t_A 34 RKTVRAFAEREVLPHAHEWERAGEIPRELHRKAAELGLLGAGFPEDAGGSGGDGADPVVICEEMHYAGSPGGVYASLFTC 113 (403)
T ss_dssp HHHHHHHHHHHTTTTHHHHHHHTSCCHHHHHHHHHTTCTTBTSCGGGTCCBCCTHHHHHHHHHHHHTTCCHHHHHHHSTH
T ss_pred HHHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHHHhCCchhhhHHHhhh
Confidence 4556 8888 799999999999999999999999999999988 999999999999999999999999998 77777776
Q ss_pred hHHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEE
Q 017183 78 SLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 157 (376)
Q Consensus 78 ~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~ 157 (376)
.++...+..+|+++||++|++.+.+|+.++++++|||++|||+..+.|+|++++|||+|||+|.|+||+..||+++|+|+
T Consensus 114 ~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~ 193 (403)
T 3p4t_A 114 GIAVPHMIASGDQRLIDTYVRPTLRGEKIGALAITEPGGGSDVGHLRTRADLDGDHYVINGAKTYITSGVRADYVVTAAR 193 (403)
T ss_dssp HHHSHHHHHHTCHHHHHHTHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEE
T ss_pred hhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceEEEEEeCCEEEEEEEEEEecCCcccCEEEEEEE
Confidence 56778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCC--CCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCC-CcHHHHHHHhhHhHHHHHHHHHH
Q 017183 158 NTTT--NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIG 234 (376)
Q Consensus 158 ~~~~--~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-~~~~~~~~~~~~~rl~~aa~~lG 234 (376)
+++. +++++|+||.+.|||++.++|+++|++++++++|.||||+||+++++|.. +++......+..+|+.+++.++|
T Consensus 194 ~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G 273 (403)
T 3p4t_A 194 TGGPGAGGVSLIVVDKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGFAQIAAAFVAERVGLATQAYA 273 (403)
T ss_dssp CSSSSGGGEEEEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCCceEEEEEeCCCCCeEecCCCCcccCCCCCeeEEEEcceEecHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9753 56899999999999999999999999999999999999999999999876 56788888899999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC-hhhhhhHHHHHHHHHHHHH
Q 017183 235 ISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMT-PGHASLGKSWITARARETV 313 (376)
Q Consensus 235 ~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~K~~~~~~a~~~~ 313 (376)
+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+. ...++++|.++++.+.+++
T Consensus 274 ~a~~al~~a~~~a~~R~~fg~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~aK~~a~~~a~~v~ 353 (403)
T 3p4t_A 274 GAQRCLDLTVEWCRNRDTFGRPLISRQAVQNTLAGMARRIDVARVYTRHVVERQLAGETNLIAEVCFAKNTAVEAGEWVA 353 (403)
T ss_dssp HHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998766 6778999999999999999
Q ss_pred HHHHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhcccC
Q 017183 314 ALGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTGIAS 364 (376)
Q Consensus 314 ~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~~ 364 (376)
+.++|++||.||.++++++|+|||++...+++|++++++..|++.+ |+|+
T Consensus 354 ~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l-glps 403 (403)
T 3p4t_A 354 NQAVQLFGGMGYMAESEVERQYRDMRILGIGGGTTEILTSLAAKTL-GFQS 403 (403)
T ss_dssp HHHHHHHGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHHHHHHHHH-TTTC
T ss_pred HHHHHhhChhhccCCCcHHHHHHHhhcceeccCHHHHHHHHHHHHc-CCCC
Confidence 9999999999999999999999999999999999999999999998 8874
No 5
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=1.8e-66 Score=493.74 Aligned_cols=358 Identities=32% Similarity=0.479 Sum_probs=339.3
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhh
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 78 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~ 78 (376)
++.+ +|++ ++.|.+.+.|+++.+|++.|++|++.||+++.+ ++|||.|+++.+...++|+++++|+++++.+.+|..
T Consensus 11 ~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~ 90 (372)
T 2dvl_A 11 LDAVRRVAREVLYPLAPEYDRKAEYPWPQLKALAELGLLGMTTPEEWGGVGLDSVTWALALEELAAADPSVAVIVSVTSG 90 (372)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHTTGGGTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhCchhHHHHHhhCCCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhcCcHHHHHHHHhhh
Confidence 4555 8888 788888999999999999999999999999988 999999999999999999999999999888888754
Q ss_pred HHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEEe
Q 017183 79 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 158 (376)
Q Consensus 79 ~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~~ 158 (376)
++..++..+|+++||++|++.+.+|+.++++++|||..|||+..+.|+|++++|||+|||+|.|+||+..||+++|+|++
T Consensus 91 ~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~ 170 (372)
T 2dvl_A 91 LPQYMLLRFGSEAQKRRYLVPLARGEWIGAFCLTEPQAGSDAKSLRAEARRVKGGFVLNGVKSWITSAGHAHLYVVMART 170 (372)
T ss_dssp HHHHHHHHHCCHHHHHHTHHHHHTTSSCEEEECCCSSCSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEE
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCChhhCeeEEEEECCEEEEEeEEEeecCCCcCCEEEEEEEe
Confidence 57788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCC-CcHHHHHHHhhHhHHHHHHHHHHHHH
Q 017183 159 TTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIGISM 237 (376)
Q Consensus 159 ~~~~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-~~~~~~~~~~~~~rl~~aa~~lG~~~ 237 (376)
++ ++++|+||.+.|||++.+.|+++|+++++++++.||||+||+++++|.+ +++......+...|+.+++.++|+++
T Consensus 171 ~~--g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~ 248 (372)
T 2dvl_A 171 EK--GISAFLVEKGTPGLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGRGLAYALAGLDSGRVGVAAQAVGIAR 248 (372)
T ss_dssp TT--EEEEEEEETTCTTEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC--CcEEEEEeCCCCCeEecCcccccccCcCCeeEEEECcEEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 74 7899999999999999999999999999999999999999999999876 56777788889999999999999999
Q ss_pred HHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhhHHHHHHHHHHHHHHHHH
Q 017183 238 GVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGR 317 (376)
Q Consensus 238 ~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~a~~~~~~~~ 317 (376)
++++.+++|+++|++||+||+++|.+|+++++|.+++++++++++++++.++.+.+....++++|.++++.+.++++.++
T Consensus 249 ~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~ 328 (372)
T 2dvl_A 249 GAFEIAKAYAEEREQFGKKLKEHQAIAFKIADMHVKIAAARALVLEAARKKDRGERFTLEASAAKLFASAAAVEVTREAV 328 (372)
T ss_dssp HHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCcccCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998877677889999999999999999999
Q ss_pred HHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhc
Q 017183 318 ELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTG 361 (376)
Q Consensus 318 ~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~ 361 (376)
|++||.||..+++++|+|||++...+++|++++++..|++.+++
T Consensus 329 q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 372 (372)
T 2dvl_A 329 QVLGGYGYHRDYRVERYYRDAKVTEIYEGTSEIQRLVIARELYR 372 (372)
T ss_dssp HHTGGGGGSGGGSHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred HhhcCeecCCCCcHHHHHHHhhcceecCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999874
No 6
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=5.7e-67 Score=495.95 Aligned_cols=355 Identities=21% Similarity=0.285 Sum_probs=329.1
Q ss_pred hHHH-HhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhhHHHHH
Q 017183 6 DFCI-FFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLT 83 (376)
Q Consensus 6 ~f~~-~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~~~~~~ 83 (376)
+|++ ++.|.+.+.|+++.+|++.|++|++.||+++.+ ++|||.|+++.+.+.++|+++++|+++++.+.+|..++..+
T Consensus 6 ~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~ 85 (366)
T 1r2j_A 6 ALLTDLVGDRAAEWDTSGELPRDLLVRLGADGLLCAEVAAEHGGLGLGSRENGEFTAHVGSLCSSLRSVMTSQGMAAWTV 85 (366)
T ss_dssp HHHHHHHSSCHHHHHHHTCCCHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccccHHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHH
Confidence 8888 899999999999999999999999999999988 99999999999999999999999999998888875456677
Q ss_pred HHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEEeCCCCC
Q 017183 84 IALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ 163 (376)
Q Consensus 84 l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~~~~~~~ 163 (376)
+. +|+++||++|+|.+.+|+ ++++++|||..|||+..+.|+|++++|||+|||+|.|+||+..||+++|+|++++ ++
T Consensus 86 l~-~g~~~q~~~~l~~~~~G~-~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~-~g 162 (366)
T 1r2j_A 86 QR-LGDAGQRATFLKELTSGK-LAAVGFSERQAGSDLSAMRTRVRLDGDTAVVDGHKVWTTAAAYADHLVVFGLQED-GS 162 (366)
T ss_dssp HH-HSCHHHHHHHHHHTTCC--CEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCSEEEEEEBCSS-SC
T ss_pred HH-hCCHHHHHHHHHHHhCCC-eeEEEeCCCCCCCchhhCEeEEEEeCCEEEEEEEEecccCCcccCEEEEEEEeCC-Cc
Confidence 88 999999999999999999 9999999999999999999999999999999999999999999999999999864 37
Q ss_pred eEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCC-CcHHHH-HHHhhHhHHHHHHHHHHHHHHHHH
Q 017183 164 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDT-SKVLAVSRVMVAWQPIGISMGVYD 241 (376)
Q Consensus 164 ~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-~~~~~~-~~~~~~~rl~~aa~~lG~~~~~l~ 241 (376)
+++|+||.+.|||++.+.|+++|+++++++++.||||+||+++++|.+ +++... ...++.+|+.+++.++|+++++++
T Consensus 163 ~~~flV~~~~~Gv~~~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~~l~~~r~~~aa~~~G~a~~al~ 242 (366)
T 1r2j_A 163 GAVVVVPADTPGVRVERVPKPSGCRAAGHADLHLDQVRVPAGAVLAGSGASLPMLVAASLAYGRKSVAWGCVGILRACRT 242 (366)
T ss_dssp CEEEEEETTSTTEEEEECSSCSSSTTSCCEEEEEEEEEEEGGGBCTTTTSCTTTTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECCCCCeEecCCcCCccCCCCCeeEEEEeeEEEcHHHcCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999876 566666 777889999999999999999999
Q ss_pred HHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCChhhhhhHHHHHHHHHHHHHHHHHHHh
Q 017183 242 MCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKG-AMTPGHASLGKSWITARARETVALGRELL 320 (376)
Q Consensus 242 ~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~K~~~~~~a~~~~~~~~~~~ 320 (376)
.+++|+++|++||+||+++|.+|+++++|.++++++|++++++++.++.+ .+....++++|.++++.+.++++.++|++
T Consensus 243 ~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~ 322 (366)
T 1r2j_A 243 AAVAHARTREQFGRPLGDHQLVAGHIADLWTAEQIAARVCEYASDHWDEGSPEMVPATILAKHVAAERAAAGAATAAQVL 322 (366)
T ss_dssp HHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988876 55666789999999999999999999999
Q ss_pred CCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhccc
Q 017183 321 GGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTGIA 363 (376)
Q Consensus 321 Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~ 363 (376)
||.||.++++++|+|||++...+++|++++++..|++.++++|
T Consensus 323 Gg~g~~~~~~~~r~~Rda~~~~~~~G~~~~~~~~ia~~~lgl~ 365 (366)
T 1r2j_A 323 ASAGAREGHVVERAYRDAKLMEIIEGSSEMCRVMLAQHALALP 365 (366)
T ss_dssp GGGGC--CCHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHTTCC
T ss_pred CCeeecCCCcHHHHHHhccCceecCCHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999876
No 7
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=100.00 E-value=4.4e-66 Score=493.62 Aligned_cols=361 Identities=31% Similarity=0.453 Sum_probs=339.7
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhh
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 78 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~ 78 (376)
++.+ +|++ ++.|.+.+.|+++.+|+++|++|++.||+++.+ ++|||.|+++.+.+.++|+++++|+++++.+.+|..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~ 94 (387)
T 2d29_A 15 LGPFREFLKAEVAPGAAERDRTGAFPWDLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVEAIAYYDGALALTVASHNS 94 (387)
T ss_dssp HHHHHHHHHHHTGGGHHHHHHHCCCCHHHHHHHHTTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcchhHHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhhChHHHHHHHHHHH
Confidence 3455 8886 889999999999999999999999999999988 999999999999999999999999999987777754
Q ss_pred HHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEEe
Q 017183 79 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 158 (376)
Q Consensus 79 ~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~~ 158 (376)
++..++..+|+++||++|++.+.+|+.++++++|||.+|||+..+.|+|++++|||+|||+|.|+||+..||+++|+|++
T Consensus 95 ~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~ 174 (387)
T 2d29_A 95 LATGHILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKVEGGWRLNGTKQFITQGSVAGVYVVMART 174 (387)
T ss_dssp THHHHHHHHCCHHHHHHHHHHHHTSSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEeCCCCCCCCHhhCceEEEEeCCEEEEEeEEeccCCCCcCCEEEEEEEe
Confidence 57778899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC-------CCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCC-CcHHHHHHHhhHhHHHHHH
Q 017183 159 TTT-------NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAW 230 (376)
Q Consensus 159 ~~~-------~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-~~~~~~~~~~~~~rl~~aa 230 (376)
+++ +++++|+||.+.|||++.++|+++|++++++++++||||+||+++++|.+ +++......+..+|+.+++
T Consensus 175 ~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa 254 (387)
T 2d29_A 175 DPPPSPERKHQGISAFAFFRPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGERGKGFYDVLRVLDGGRIGIAA 254 (387)
T ss_dssp SCCSCGGGTTTTEEEEEEECCSSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHHHHHHHHHHH
T ss_pred CCccccCCCCCCeEEEEEeCCCCCeeccCcccccCCCCCCeeEEEEeeEEECHHHcCCCCCccHHHHHHHHHHHHHHHHH
Confidence 632 26899999999999999999999999999999999999999999999876 5677778888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhhHHHHHHHHHH
Q 017183 231 QPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARAR 310 (376)
Q Consensus 231 ~~lG~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~a~ 310 (376)
.++|+++++++.+++|+++|++||+||+++|.+|+++++|.++++++|++++++++.++.+.+....++++|.++++.+.
T Consensus 255 ~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~ 334 (387)
T 2d29_A 255 MAVGLGQAALDYALAYAKGREAFGRPIAEFEGVSFKLAEAATELEAARLLYLKAAELKDAGRPFTLEAAQAKLFASEAAV 334 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCccCCcchHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999877666778999999999999
Q ss_pred HHHHHHHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhcc
Q 017183 311 ETVALGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTGI 362 (376)
Q Consensus 311 ~~~~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~ 362 (376)
++++.++|++||.||..+++++|+|||++...+++|++++++..|++.+++.
T Consensus 335 ~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~G~~~i~~~~ia~~~l~~ 386 (387)
T 2d29_A 335 KACDEAIQILGGYGYVKDYPVERYWRDARLTRIGEGTSEILKLVIARRLLEA 386 (387)
T ss_dssp HHHHHHHHHHGGGGGSTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCeecCCCChHHHHHHHhhCccccCCHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999998753
No 8
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=100.00 E-value=1.8e-67 Score=504.49 Aligned_cols=363 Identities=35% Similarity=0.596 Sum_probs=338.1
Q ss_pred hHH-hHHH-HhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhhH
Q 017183 3 QRV-DFCI-FFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSL 79 (376)
Q Consensus 3 ~~~-~f~~-~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~~ 79 (376)
+.+ +|++ ++.|.+.+.|+++.+|+++|++|++.||+++.+ ++|||.|+++.+...++|+++++|+++++.+.+|..+
T Consensus 28 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~ 107 (396)
T 3ii9_A 28 DAAHAYAQGKLAPRVTEAFRHETTDAAIFREMGEIGLLGPTIPEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSL 107 (396)
T ss_dssp HHHHHHCCCCCHHHHHHHHHHTCCCTHHHHHHHHTTCSSTTSCGGGTSCCCCHHHHHHHHHHHHTTCHHHHHHHHCCCCC
T ss_pred HHHHHHHHHhCChhHHHHHhhCCCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHhChhHHHHHHhhhhh
Confidence 444 7775 788889999999999999999999999999988 9999999999999999999999999999888877655
Q ss_pred HHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEEeC
Q 017183 80 AMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 159 (376)
Q Consensus 80 ~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~~~ 159 (376)
+...+..+|+++||++|++.+.+|+.++++++|||++|||+..+.|+|++++|||+|||+|.|+|++..||+++|+|+++
T Consensus 108 ~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~ 187 (396)
T 3ii9_A 108 VMVPIFEFGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGGYSLSGSKMWITNSPIADVFVVWAKLD 187 (396)
T ss_dssp CCHHHHHHSCHHHHHHHHHHHHHTSSCEEEECCCCC------CCCCEEEEETTEEEEEEEEEEEETGGGCSEEEEEEEEE
T ss_pred HHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCChhhCeeEEEEeCCEEEEEEEEEeECCCccCCEEEEEEEec
Confidence 56778999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred CC--CCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCCCcHHHHHHHhhHhHHHHHHHHHHHHH
Q 017183 160 TT--NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISM 237 (376)
Q Consensus 160 ~~--~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~~~~~~~~~~~~~~rl~~aa~~lG~~~ 237 (376)
++ +++++|+||.+.|||++.+.|+++|++++++++++||||+||++++++..+++......+...|+.+++.++|+++
T Consensus 188 ~~g~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~l~~~~g~~~~~~~l~~~r~~~aa~~~G~a~ 267 (396)
T 3ii9_A 188 EDGRDEIRGFILEKGCKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPHVKGLRGPFTCLNSARYGIAWGALGAAE 267 (396)
T ss_dssp ETTEEEEEEEEEETTCTTEECCBCCCCSSCTTSCEEEEEEEEEEEEGGGBCTTCCSTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceEEEEEecCCCCeEeccccccccCCcCCeeEEEEccEEECHHHccCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 3489999999999999999999999999999999999999999999987678888888899999999999999999
Q ss_pred HHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhhHHHHHHHHHHHHHHHHH
Q 017183 238 GVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGR 317 (376)
Q Consensus 238 ~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~a~~~~~~~~ 317 (376)
++++.+++|+++|++||+|++++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.++++.++
T Consensus 268 ~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~~~~~a~ 347 (396)
T 3ii9_A 268 SCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLAR 347 (396)
T ss_dssp HHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCeeCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999877777899999999999999999999
Q ss_pred HHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhcccCC
Q 017183 318 ELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTGIASF 365 (376)
Q Consensus 318 ~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~~~ 365 (376)
|+|||.||.++++++|+|||++...+++|++++++..|++.++|+|.+
T Consensus 348 q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~~~~~~ia~~llglp~~ 395 (396)
T 3ii9_A 348 DMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAQTGIQAF 395 (396)
T ss_dssp HHHCSCSCSGGGHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHSCCCC
T ss_pred HhhCcccccCCCcHHHHHhhhcCceeecCHHHHHHHHHHHHHhCcccc
Confidence 999999999999999999999999999999999999999999999875
No 9
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=2e-66 Score=496.84 Aligned_cols=359 Identities=29% Similarity=0.413 Sum_probs=337.7
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhh
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 78 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~ 78 (376)
++.+ +|++ ++.|.+.+.|+++.+|+++|++|++.||+++.+ ++|||.|+++.+.+.++|+++++|+++++++..|.
T Consensus 27 ~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~- 105 (393)
T 3pfd_A 27 REAIRALAEKEIAPYAAEVDEKARFPEEALAALNSSGFSAIHVPEEYGGQGADSVATCIVIEEVARVDCSASLIPAVNK- 105 (393)
T ss_dssp HHHHHHHHHHHTGGGHHHHHHTTCCCHHHHHHHHHHTCSCTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhCchHHHHHhhhCCCCHHHHHHHHHCCCCCCCCChhHCCCCCCHHHHHHHHHHHHhhCchHHHHHHHHH-
Confidence 3455 8887 899999999999999999999999999999988 99999999999999999999999999998777665
Q ss_pred HHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEEe
Q 017183 79 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 158 (376)
Q Consensus 79 ~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~~ 158 (376)
++...+..+|+++||++|++.+.+|+.++++++|||++|||+....|+|++++|||+|||+|.|+||+..||+++|+|++
T Consensus 106 ~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~ 185 (393)
T 3pfd_A 106 LGTMGLILRGSEELKKQVLPAVASGEAMASYALSEREAGSDAASMRTRAVADGDDWILNGSKCWITNGGKSTWYTVMAVT 185 (393)
T ss_dssp HTTHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEES
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCcccCeeEEEEcCCEEEEeeEEEEecCCcccCEEEEEEEe
Confidence 56677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC---CCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCC-CcHHHHHHHhhHhHHHHHHHHHH
Q 017183 159 TTT---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIG 234 (376)
Q Consensus 159 ~~~---~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-~~~~~~~~~~~~~rl~~aa~~lG 234 (376)
++. +++++|+||.+.|||++.++|+++|+++++++++.||||+||+++++|.+ +++......+...|+.+++.++|
T Consensus 186 ~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G 265 (393)
T 3pfd_A 186 DPDKGANGISAFMVHKDDEGFTVGPKERKLGIKGSPTTELYFENCRIPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVG 265 (393)
T ss_dssp CGGGGGGGEEEEEEETTSTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHTTHHHHHHHHHH
T ss_pred CCCCCCCceEEEEEECCCCCeEecCCCCcccCCCCCceEEEEccEEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 743 56899999999999999999999999999999999999999999999876 57788888899999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-ChhhhhhHHHHHHHHHHHHH
Q 017183 235 ISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAM-TPGHASLGKSWITARARETV 313 (376)
Q Consensus 235 ~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~K~~~~~~a~~~~ 313 (376)
+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+ ....++++|.++++.+.+++
T Consensus 266 ~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~aK~~a~~~a~~~~ 345 (393)
T 3pfd_A 266 IAQGALDAAIAYTKERKQFGRPVSDNQGVQFMLADMAMKIEAARLMVYSAAARAERGEGDLGFISAASKCFASDVAMEVT 345 (393)
T ss_dssp HHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998765 56678999999999999999
Q ss_pred HHHHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhc
Q 017183 314 ALGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTG 361 (376)
Q Consensus 314 ~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~ 361 (376)
+.++|++||.||..+++++|+|||+++..+++|++++++..|++.++|
T Consensus 346 ~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~ll~ 393 (393)
T 3pfd_A 346 TDAVQLFGGYGYTQDFPVERMMRDAKITQIYEGTNQIQRVVMSRALLR 393 (393)
T ss_dssp HHHHHHTGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHTC
T ss_pred HHHHHHhchhhccCCChHHHHHHhhcceeeecCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999975
No 10
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=3.9e-66 Score=492.63 Aligned_cols=359 Identities=30% Similarity=0.469 Sum_probs=339.2
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhh
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 78 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~ 78 (376)
++.+ +|++ ++.|.+.+.|+.+.+|+++|++|.+.||+++.+ ++|||.|+++.+...++|+++++|+++++.+.+|.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~eel~~~~~~~~~~~~~~~- 91 (379)
T 1ukw_A 13 QALARRFAKEVILPVAQEYDEKEEVPWPVIEKLHEVGLLNAIIPEEYGGMGLKMLDEVIVGEELAYACMGIYTIPMASD- 91 (379)
T ss_dssp HHHHHHHHHHTTGGGHHHHHHHTCCCHHHHHHHHHTTCTTTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHHH-
Confidence 3455 8886 889999999999999999999999999999988 99999999999999999999999999998887774
Q ss_pred HHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEEe
Q 017183 79 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 158 (376)
Q Consensus 79 ~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~~ 158 (376)
++...+..+|+++||++|++.+.+|+.++++++|||.+|||+..+.|+|++++|||+|||+|.|+||+..||+++|+|++
T Consensus 92 ~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~ 171 (379)
T 1ukw_A 92 LGITPVLLAGTEEQKERFLRPLTEKPALAAFALSEPGNGSDAAALKTRAIRQGDHYVLNGTKMWISNGGEAEWVVVFATV 171 (379)
T ss_dssp HHHHHHHHHCCHHHHHHHHGGGTSSSCEEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTEEEEEEEEES
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcChhhCeEEEEEeCCEEEEEEEEecccCCCcCCEEEEEEEc
Confidence 67788899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC---CCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCC-CcHHHHHHHhhHhHHHHHHHHHH
Q 017183 159 TTT---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIG 234 (376)
Q Consensus 159 ~~~---~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-~~~~~~~~~~~~~rl~~aa~~lG 234 (376)
+++ +++++|+||.+.|||++.+.|+++|+++++++++.||||+||+++++|.. .++......+...|+.+++.++|
T Consensus 172 ~~~~~~~g~~~flV~~~~~Gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G 251 (379)
T 1ukw_A 172 NPELRHKGVVALVVERGTPGFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLGEEGEGFKIAMQTLNKTRIPVAAGSVG 251 (379)
T ss_dssp CGGGGGGGEEEEEEETTCTTEEEEECCCCSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceEEEEEeCCCCCeEecCccccccCCCCCeeEEEEeeEEecHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 632 46899999999999999999999999999999999999999999999876 56777788888999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhhHHHHHHHHHHHHHH
Q 017183 235 ISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVA 314 (376)
Q Consensus 235 ~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~a~~~~~ 314 (376)
+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.++++
T Consensus 252 ~a~~al~~~~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~~a~~~a~~~~~ 331 (379)
T 1ukw_A 252 VARRALDEARKYAKEREAFGEPIANFQAIQFKLVDMLIGIETARMYTYYAAWLADQGLPHAHASAIAKAYASEIAFEAAN 331 (379)
T ss_dssp HHHHHHHHHHHHHHHCBSSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988776677889999999999999999
Q ss_pred HHHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhc
Q 017183 315 LGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTG 361 (376)
Q Consensus 315 ~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~ 361 (376)
.++|++||.||.++++++|+|||++...+++|++++++..|++.+++
T Consensus 332 ~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 378 (379)
T 1ukw_A 332 QAIQIHGGYGYVREFPVEKLLRDVKLNQIYEGTNEIQRLIIARHILA 378 (379)
T ss_dssp HHHHHHGGGGGSTTSSHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred HHHHhhCCeecCCCChHHHHHHHhcCceecCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999875
No 11
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=100.00 E-value=4.4e-66 Score=493.24 Aligned_cols=362 Identities=35% Similarity=0.639 Sum_probs=337.4
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhh
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 78 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~ 78 (376)
++.+ +|++ ++.|...+.|+++.+|+++|++|++.||+++.+ ++|||.|+++.+.+.++|+++++|+++++.+.+|..
T Consensus 19 ~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~ 98 (385)
T 2eba_A 19 QKAARRFLEKEALPHIRDWWEEGVFPTHLIPRFAELGFLGPTLPPEYGGAGVSSAAYGLICYELERVDSGLRSFVSVQSS 98 (385)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHTTCCCGGGHHHHHHHTCSSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCccHHHHHHhCCCCHHHHHHHHHCCCcCCCCchhhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHHHh
Confidence 3445 7887 888999999999999999999999999999988 999999999999999999999999999988888765
Q ss_pred HHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCc-CCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEE
Q 017183 79 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDA-SALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 157 (376)
Q Consensus 79 ~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~-~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~ 157 (376)
++...+..+|+++||++|+|.+.+|+.++++++|||++|||+ ..+.|+|++++|||+|||+|.|+||+..||+++|+|+
T Consensus 99 ~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~ 178 (385)
T 2eba_A 99 LVMYPIYAYGSEEQKREFLPKLARGEMVGCFGLTEPDGGSDPYGNMKTRARREGDTWVLNGTKMWITNGNLAHLAVIWAK 178 (385)
T ss_dssp TTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCCTTCTTSTTTTCCCEEEC--CEEEEEEEEEEEETTTTCSEEEEEEE
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCcCCCccccCeeEEEEeCCEEEEEeeeeccCCCcccCEEEEEEE
Confidence 666788899999999999999999999999999999999999 8999999999999999999999999999999999999
Q ss_pred eCCCCCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCCCcHHHHHHHhhHhHHHHHHHHHHHHH
Q 017183 158 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISM 237 (376)
Q Consensus 158 ~~~~~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~~~~~~~~~~~~~~rl~~aa~~lG~~~ 237 (376)
+++. .+++|+||.+.|||++.+.|+++|+++++++++.|+||+||+++++...+++......+...|+.+++.++|+++
T Consensus 179 ~~~g-~~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~l~~~~g~~~~~~~l~~~r~~~aa~~~G~a~ 257 (385)
T 2eba_A 179 DEGG-EVLGFLVPTDTPGFQAREVKRKMSLRASVTSELVLEEVRVPESLRLPKALGLKAPLSCLTQARFGIAWGAMGALE 257 (385)
T ss_dssp CC----EEEEEEETTSTTEEEEECCSBSSSCSSCEEEEEEEEEEEEGGGBCTTCCSTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCC-cEEEEEEeCCCCCeEecccccccccccCceeEEEEccEEEcHHHccCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8643 388999999999999999999999999999999999999999999944467777778888899999999999999
Q ss_pred HHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhhHHHHHHHHHHHHHHHHH
Q 017183 238 GVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGR 317 (376)
Q Consensus 238 ~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~a~~~~~~~~ 317 (376)
++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.++++.++
T Consensus 258 ~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~~a~~~a~~v~~~a~ 337 (385)
T 2eba_A 258 AVYEEAVAFAKSRSTFGEPLAKKQLVQAKLAEMLAWHTEGLLLAWRLARLKDEGKLTPAQVSLAKRQNVWKALQAARMAR 337 (385)
T ss_dssp HHHHHHHHHHHHCBSSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCeeCCeeHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998876667789999999999999999999
Q ss_pred HHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhcccC
Q 017183 318 ELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTGIAS 364 (376)
Q Consensus 318 ~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~~ 364 (376)
|++||.||..+++++|+|||++...+++|++++++..|++.++|+|.
T Consensus 338 q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~~~~~~~~ia~~llgl~~ 384 (385)
T 2eba_A 338 DILGGSGITLEYHAIRHMLNLETVYTYEGTHDVHTLVLGREITGLNA 384 (385)
T ss_dssp HHHGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHSCCC
T ss_pred HHhCCcccCCcChHHHHHHhccCceeeCChHHHHHHHHHHHHhCcCC
Confidence 99999999999999999999999999999999999999999999874
No 12
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=100.00 E-value=7e-66 Score=494.44 Aligned_cols=358 Identities=20% Similarity=0.292 Sum_probs=339.6
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHcc-CCchhHHHHHhh
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARV-DASCSTFILVHS 77 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~-~~s~~~~~~~~~ 77 (376)
++.+ +|++ ++.|...+.|+++.+|+++|++|++.||+++.+ ++|||.|+++.+.+.++|+++++ |+++++.+.+|.
T Consensus 37 ~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~ 116 (403)
T 3r7k_A 37 SQMARSFVEREIAPKLAEWEHVGEIPRDLHLNAAEVGLLGIGFPEEVGGSGGNAIDSALVTEAILAAGGSTGVCAALFTH 116 (403)
T ss_dssp HHHHHHHHHHHTTTTHHHHHHHTSCCTHHHHHHHHHTCTTBTSCGGGTCCBCCHHHHHHHHHHHHHTTCCHHHHHHHCTH
T ss_pred HHHHHHHHHHhCChhHHHHHhcCCCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHhcCCchHHHHHHHHh
Confidence 4455 8888 899999999999999999999999999999988 99999999999999999999998 998887776555
Q ss_pred hHHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEE
Q 017183 78 SLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 157 (376)
Q Consensus 78 ~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~ 157 (376)
.++...+..+|+++||++|++.+.+|+.++++++|||.+|||+..+.|+|++++|||+|||+|.|+|++..||+++|+|+
T Consensus 117 ~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~ 196 (403)
T 3r7k_A 117 GIALPHIAANGSDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVREGDTYVVNGAKTFITSGVRADFVTTAVR 196 (403)
T ss_dssp HHHSHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEETTTTCSEEEEEEE
T ss_pred hHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEecCCCCCCChhhceEEEEEECCEEEEEEEEEcccCCccCCEEEEEEE
Confidence 56778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCC--CCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCC-CcHHHHHHHhhHhHHHHHHHHHH
Q 017183 158 NTTT--NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIG 234 (376)
Q Consensus 158 ~~~~--~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-~~~~~~~~~~~~~rl~~aa~~lG 234 (376)
+++. +++++|+||.+.|||++.++|+++|++++++++|+||||+||+++++|.. +++......+..+|+.+++.++|
T Consensus 197 ~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G 276 (403)
T 3r7k_A 197 TGGPGYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVPADNLVGAENSGFLQIMQQFQAERLGIAVQAYA 276 (403)
T ss_dssp CSSSSGGGEEEEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cCCCCCCceEEEEEeCCCCCeEecCcccccCCCCCCceEEEEeeEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9753 46899999999999999999999999999999999999999999999876 56788888999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhhHHHHHHHHHHHHHH
Q 017183 235 ISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVA 314 (376)
Q Consensus 235 ~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~a~~~~~ 314 (376)
+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.++++
T Consensus 277 ~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~v~~ 356 (403)
T 3r7k_A 277 TAGRALDLAKSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVVAEVSMAKNTAVYACDYVVN 356 (403)
T ss_dssp HHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCccCCCchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999877778899999999999999999
Q ss_pred HHHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHH
Q 017183 315 LGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREV 359 (376)
Q Consensus 315 ~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~ 359 (376)
.++|+|||.||.++++++|+|||++...+++|++++++..|++.+
T Consensus 357 ~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l 401 (403)
T 3r7k_A 357 EAVQIFGGMGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAKRI 401 (403)
T ss_dssp HHHHHHGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHHHHHHHHH
T ss_pred HHHHhcCCeEecCCchHHHHHHHhCcceeecCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999987
No 13
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=5e-66 Score=493.33 Aligned_cols=359 Identities=26% Similarity=0.366 Sum_probs=333.9
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhh
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 78 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~ 78 (376)
++.+ +|++ ++.|.+.+.|+++.+|+++|++|++.||+++.+ ++|||.|+++.+...++|+++++|+++++.+..|.
T Consensus 24 ~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~- 102 (387)
T 3nf4_A 24 IELTREIADKVLDPIVDRHEKDETYPEGVFEQLGAAGLLSLPQPEEWGGGGQPYEVYLQVLEEIAARWASVAVAVSVHS- 102 (387)
T ss_dssp HHHHHHHHHHHTTTTHHHHHHHTCCCTTHHHHHHTTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhCCccHHHHhhhCCCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHHH-
Confidence 4455 8888 899999999999999999999999999999988 99999999999999999999999999999888877
Q ss_pred HHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEEe
Q 017183 79 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 158 (376)
Q Consensus 79 ~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~~ 158 (376)
++...+..+|+++||++|++.+.+|+.++++++|||++|||+..+.|+|++++|||+|||+|.|+||+..||+++|+|++
T Consensus 103 ~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~ 182 (387)
T 3nf4_A 103 LSSHPLLVFGTEEQKKRWLPGMLSGEQIGAYSLSEPQAGSDAAALRCAATPTDGGYVINGSKSWITHGGKADFYTLFART 182 (387)
T ss_dssp HHTHHHHHHSCHHHHHHHHHHHTTSSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEEcCCCCCCChhhCEEEEEEeCCEEEEEeEEecccCCcccCEEEEEEEe
Confidence 67788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCC-CcHHHHHHHhhHhHHHHHHHHHHHH
Q 017183 159 TT-TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIGIS 236 (376)
Q Consensus 159 ~~-~~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-~~~~~~~~~~~~~rl~~aa~~lG~~ 236 (376)
++ .+++++|+||.+.|||++.+.|+++|+++++++++.||||+||+++++|.. .++......+..+|+.+++.++|++
T Consensus 183 ~~~~~g~~~flV~~~~pGv~~~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a 262 (387)
T 3nf4_A 183 GEGSRGVSCFLVPADQPGLSFGKPEEKMGLHAVPTTSAFYDNARIDADRRIGEEGQGLQIAFSALDSGRLGIAAVATGLA 262 (387)
T ss_dssp C--CCCEEEEEEETTCTTEEECCCCCBSSCCSSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CCCCCceEEEEEECCCCCeEecCcccccccCCCCeeEEEEeeEEecHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 63 367999999999999999999999999999999999999999999999876 5678888889999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhhHHHHHHHHHHHHHHHH
Q 017183 237 MGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALG 316 (376)
Q Consensus 237 ~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~a~~~~~~~ 316 (376)
+++++.+++|+++|++||+|+.++|.+|+++++|..++++++++++++++.++.+.+....++++|.++++.+.++++.+
T Consensus 263 ~~al~~a~~~a~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~aK~~a~~~a~~~~~~a 342 (387)
T 3nf4_A 263 QAALDEAVAYANERTAFGRKIIDHQGLGFLLADMAAAVATARATYLDAARRRDQGRPYSQQASIAKLTATDAAMKVTTDA 342 (387)
T ss_dssp HHHHHHHHHHHHC------CTTTC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCeeCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987777789999999999999999999
Q ss_pred HHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhc
Q 017183 317 RELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTG 361 (376)
Q Consensus 317 ~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~ 361 (376)
+|++||.||.++++++|+|||++...+++|++++++..|++.+++
T Consensus 343 ~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l~~ 387 (387)
T 3nf4_A 343 VQVFGGVGYTRDYRVERYMREAKIMQIFEGTNQIQRLVIARGLTR 387 (387)
T ss_dssp HHHHGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHTTC-
T ss_pred HHhhCcHhhcCCCcHHHHHhHhhcCeeecChHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999998763
No 14
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=100.00 E-value=1.3e-65 Score=491.64 Aligned_cols=360 Identities=26% Similarity=0.389 Sum_probs=338.3
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhh
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 78 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~ 78 (376)
++.+ +|++ ++.|.+.+.|+++.+|+++|++|++.||+++.+ ++|||.|+++.+.+.++|+++++|+++++.+ +|..
T Consensus 24 ~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~-~~~~ 102 (396)
T 1egd_A 24 QATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAYGCTGVQTAI-EGNS 102 (396)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHCCCCHHHHHHHHHHTCSSTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHH-HHHH
T ss_pred HHHHHHHHHHhCchhHHHHHhhCCCCHHHHHHHHHCCCCCCCCchhhCCCCCCHHHHHHHHHHHHhhCccHHHHH-Hhhh
Confidence 3455 8887 788999999999999999999999999999988 9999999999999999999999999998876 6665
Q ss_pred HHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEEe
Q 017183 79 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 158 (376)
Q Consensus 79 ~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~~ 158 (376)
++...|..+|+++||++|+|.+.+|+.++++++|||+.|||...+.|+|++++|||+|||+|.|+||+..||+++|+|++
T Consensus 103 ~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~ 182 (396)
T 1egd_A 103 LGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARS 182 (396)
T ss_dssp HHTHHHHHHCCHHHHHHHHHHHHHSCCCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEETTTTCSEEEEEEEC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcchhhCeeEEEEeCCEEEEEEEEEcccCCcccCEEEEEEEe
Confidence 66667889999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC------CCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCC-CcHHHHHHHhhHhHHHHHHH
Q 017183 159 TTT------NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQ 231 (376)
Q Consensus 159 ~~~------~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-~~~~~~~~~~~~~rl~~aa~ 231 (376)
++. .++++|+||.+.|||++.+.|+++|++++++++|+||||+||+++++|.+ .++......+...|+.+++.
T Consensus 183 ~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~ 262 (396)
T 1egd_A 183 DPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAFDKERPVVAAG 262 (396)
T ss_dssp CCCTTSCGGGTEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGBSSSTTBHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCeEEEEEeCCCCCeeeCCccccccccCCCeeEEEECcEEECHHHcCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 643 36789999999999999999999999999999999999999999999876 56777788888999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhhHHHHHHHHHHH
Q 017183 232 PIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARE 311 (376)
Q Consensus 232 ~lG~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~a~~ 311 (376)
++|+++++++.+++|+++|++||+||+++|.+|++|++|.+++++++++++++++.++.+.+....++++|.++++.+.+
T Consensus 263 ~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~ 342 (396)
T 1egd_A 263 AVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQ 342 (396)
T ss_dssp HHHHHHHHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998876667789999999999999
Q ss_pred HHHHHHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhcc
Q 017183 312 TVALGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTGI 362 (376)
Q Consensus 312 ~~~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~ 362 (376)
+++.++|++||.||..+++++|+|||++...+++|++++++..|++.+++.
T Consensus 343 ~~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~~ 393 (396)
T 1egd_A 343 LATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYGGTSQIQRLIVAREHIDK 393 (396)
T ss_dssp HHHHHHHHHGGGTTBTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCcccccCCChHHHHHHHhhCeeecCCHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999864
No 15
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.2e-65 Score=490.14 Aligned_cols=360 Identities=28% Similarity=0.399 Sum_probs=339.5
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCC---CCHHHHHHHHHHHHccCCchhHHHHH
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPG---HSVTGAAIAIAEIARVDASCSTFILV 75 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g---~~~~~~~~~~~~la~~~~s~~~~~~~ 75 (376)
++.+ +|++ ++.|.+.+.|+++.+|+++|++|++.||+++.+ ++|||.| +++.+.+.++|+++++|+++++.+.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~v~eel~~~~~~~~~~~~~ 92 (383)
T 1buc_A 13 LKLAHDFGEKKLAPTVTERDHKGIYDKELIDELLSLGITGAYFEEKYGGSGDDGGDVLSYILAVEELAKYDAGVAITLSA 92 (383)
T ss_dssp HHHHHHHHHHTTTTTHHHHHHHTCCCHHHHHHHHTTSGGGTTSCGGGTCGGGGTCCHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCCCCHHHHHHHHHHHHhhChHHHHHHHh
Confidence 3455 8886 889999999999999999999999999999988 9999999 99999999999999999999988888
Q ss_pred hhhHHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEe-CCEEEEeeeeecccCCCCCCEEEE
Q 017183 76 HSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKV-EGGWILEGQKRWIGNSTFADVLVI 154 (376)
Q Consensus 76 ~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~-~~g~~l~G~k~~~s~~~~ad~~~v 154 (376)
|..++..++..+|+++||++|++.+.+|+.++++++|||++|||+..+.|+|+++ +|||+|||+|.|+||+..||+++|
T Consensus 93 ~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~~g~~lnG~K~~~s~~~~Ad~~~v 172 (383)
T 1buc_A 93 TVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFITNGGAADIYIV 172 (383)
T ss_dssp HHHHTHHHHHHHCCHHHHHHTHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEETTTTCSEEEE
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEeCCCCCCCChhhCEeEEEEcCCCEEEEEEEEeccCCCCcCCEEEE
Confidence 7656778889999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred EEEeCCC---CCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCC-CcHHHHHHHhhHhHHHHHH
Q 017183 155 FARNTTT---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAW 230 (376)
Q Consensus 155 ~a~~~~~---~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-~~~~~~~~~~~~~rl~~aa 230 (376)
+|+++++ +++++|+||.+.|||++.+.|+++|+++++++++.||||+||+++++|.+ +++......+...|+.+++
T Consensus 173 ~a~~~~~~~~~g~~~flV~~~~~Gv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa 252 (383)
T 1buc_A 173 FAMTDKSKGNHGITAFILEDGTPGFTYGKKEDKMGIHTSQTMELVFQDVKVPAENMLGEEGKGFKIAMMTLDGGRIGVAA 252 (383)
T ss_dssp EEESCSSSSTTSEEEEEEETTCTTEEEEEECCCSSCTTSCEEEEEEEEEEECGGGEESCTTBHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCceEEEEEECCCCCeEecCccccccccCCceeEEEEccEEeCHHHcCCCCCchHHHHHHHHHHHHHHHHH
Confidence 9998643 46899999999999999999999999999999999999999999999876 5677777888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhhHHHHHHHHHH
Q 017183 231 QPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARAR 310 (376)
Q Consensus 231 ~~lG~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~a~ 310 (376)
.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.
T Consensus 253 ~~~G~a~~al~~~~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~ 332 (383)
T 1buc_A 253 QALGIAEAALADAVEYSKQRVQFGKPLCKFQSISFKLADMKMQIEAARNLVYKAACKKQEGKPFTVDAAIAKRVASDVAM 332 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999887677788999999999999
Q ss_pred HHHHHHHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhc
Q 017183 311 ETVALGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTG 361 (376)
Q Consensus 311 ~~~~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~ 361 (376)
++++.++|++||.||.++++++|+|||++...+++|++++++..|++.+++
T Consensus 333 ~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 383 (383)
T 1buc_A 333 RVTTEAVQIFGGYGYSEEYPVARHMRDAKITQIYEGTNEVQLMVTGGALLR 383 (383)
T ss_dssp HHHHHHHHHHGGGGGSTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcCCeecCCCChHHHHHHHhhcccccCCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999874
No 16
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=100.00 E-value=1.2e-65 Score=491.20 Aligned_cols=361 Identities=30% Similarity=0.440 Sum_probs=339.8
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhh
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 78 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~ 78 (376)
++.+ +|++ ++.|.+.+.|+++.+|+++|++|++.||+++.+ ++|||.|+++.+.+.++|+++++|+++++.+.+|..
T Consensus 14 ~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~ 93 (391)
T 2vig_A 14 LQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNS 93 (391)
T ss_dssp HHHHHHHHHHHTTTTHHHHHHHTCCCHHHHHHHHHHTTTSTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcccHHHHHhcCCCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 3455 8887 789999999999999999999999999999988 999999999999999999999999999988888753
Q ss_pred HHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEEe
Q 017183 79 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 158 (376)
Q Consensus 79 ~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~~ 158 (376)
++..++..+|+++||++|++.+.+|+.++++++|||++|||+..+.|+|++++|||+|||+|.|+||+..||+++|+|++
T Consensus 94 ~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~ 173 (391)
T 2vig_A 94 LYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFAST 173 (391)
T ss_dssp TTHHHHHHHCCHHHHHHHTGGGSSSSCCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCCCcccceeEEEEeCCEEEEeeEEEeecCCCcCCEEEEEEEe
Confidence 56778899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC---CCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCC-CcHHHHHHHhhHhHHHHHHHHHH
Q 017183 159 TTT---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIG 234 (376)
Q Consensus 159 ~~~---~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-~~~~~~~~~~~~~rl~~aa~~lG 234 (376)
+++ +++++|+||.+.|||++.+.|+++|++++++++|.||||+||+++++|.+ .++......+...|+.+++.++|
T Consensus 174 ~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G 253 (391)
T 2vig_A 174 DRALQNKSISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGRIGIASQALG 253 (391)
T ss_dssp CSSSTTSCEEEEEEESSCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceEEEEEeCCCCCeEecCccccccCCCCCeeEEEECcEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 632 36899999999999999999999999999999999999999999999876 56777778889999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhhHHHHHHHHHHHHHH
Q 017183 235 ISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVA 314 (376)
Q Consensus 235 ~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~a~~~~~ 314 (376)
+++++++.+++|+++|++||+|++++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.++++
T Consensus 254 ~a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~ 333 (391)
T 2vig_A 254 IAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKDNKKPFIKEAAMAKLAASEAATAISH 333 (391)
T ss_dssp HHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998776667789999999999999999
Q ss_pred HHHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhcc
Q 017183 315 LGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTGI 362 (376)
Q Consensus 315 ~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~ 362 (376)
.++|++||.||..+++++|+|||++...+++|++++++..|++.+++.
T Consensus 334 ~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~G~~~~~~~~ia~~~l~~ 381 (391)
T 2vig_A 334 QAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVIAGHLLRS 381 (391)
T ss_dssp HHHHHHGGGGGBTTSSHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCeEecCCChHHHHHHHhhcceeecCHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999864
No 17
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=100.00 E-value=2.7e-65 Score=490.17 Aligned_cols=359 Identities=30% Similarity=0.450 Sum_probs=337.5
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhh
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 78 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~ 78 (376)
++.+ +|++ ++.|...+.|+++.+|+++|++|++.||+++.+ ++|||.|+++.+.+.++|+++++|+++++.+.+|..
T Consensus 37 ~~~~r~~~~~~~~p~~~~~d~~~~~~~~~~~~l~e~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~ 116 (404)
T 2jif_A 37 KSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNT 116 (404)
T ss_dssp HHHHHHHHHHHTGGGHHHHHHHTCCCHHHHHHHHHTTTTSSSSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcccHHHHhhcCCCCHHHHHHHHHCCCCccCCchhhCCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 4455 8888 889988899999999999999999999999988 999999999999999999999999999988888776
Q ss_pred HHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEEe
Q 017183 79 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 158 (376)
Q Consensus 79 ~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~~ 158 (376)
++..++..+|+++||++|+|.+.+|. ++++++|||+.|||+..+.|+|++++|||+|||+|.|+||+..||+++|+|++
T Consensus 117 ~~~~~l~~~g~~~qk~~~l~~~~~g~-~~~~a~tEp~~Gsd~~~~~t~A~~~g~g~vlnG~K~~is~a~~Ad~~~v~ar~ 195 (404)
T 2jif_A 117 LINTLIRKHGTEEQKATYLPQLTTEK-VGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLVMANV 195 (404)
T ss_dssp THHHHHHHHCCHHHHHHHHHHHHHTC-CEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEES
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhCCC-cceEEecCCCCCCChhhceeEEEEeCCEEEEEeEEEeecCCcccCEEEEEEEe
Confidence 66778899999999999999999985 78999999999999999999999999999999999999999999999999998
Q ss_pred CCC---CCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCC-CcHHHHHHHhhHhHHHHHHHHHH
Q 017183 159 TTT---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIG 234 (376)
Q Consensus 159 ~~~---~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-~~~~~~~~~~~~~rl~~aa~~lG 234 (376)
++. +++++|+||.+.|||++.+.|+++|+++++++++.||||+||+++++|.. .++......+..+|+.+++.++|
T Consensus 196 ~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G 275 (404)
T 2jif_A 196 DPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLG 275 (404)
T ss_dssp CGGGGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceEEEEEecCCCCeEeccCcccccCCCCceEEEEEccEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 632 46899999999999999999999999999999999999999999999876 56777778888999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhhHHHHHHHHHHHHHH
Q 017183 235 ISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVA 314 (376)
Q Consensus 235 ~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~a~~~~~ 314 (376)
+++++++.+++|+++|++||+||.++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.++++
T Consensus 276 ~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~e~a~~v~~ 355 (404)
T 2jif_A 276 LAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEASMAKYYASEIAGQTTS 355 (404)
T ss_dssp HHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcccCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998876667789999999999999999
Q ss_pred HHHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhc
Q 017183 315 LGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTG 361 (376)
Q Consensus 315 ~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~ 361 (376)
.++|++||.||..+++++|+|||++...+++|++++++..|++.+++
T Consensus 356 ~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~~~ 402 (404)
T 2jif_A 356 KCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAKHIDA 402 (404)
T ss_dssp HHHHHHGGGGGBTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHhcCcceecCCCcHHHHHhhccceeecCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999864
No 18
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=100.00 E-value=5.3e-65 Score=485.77 Aligned_cols=356 Identities=25% Similarity=0.356 Sum_probs=334.2
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccC-CchhHHHHHhh
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVD-ASCSTFILVHS 77 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~-~s~~~~~~~~~ 77 (376)
++.+ +|++ ++.|.+.+.|+++.+|+++|++|++.||+++.+ ++|||.|+++.+.+.++|+++++| +++++.+ |.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~--~~ 95 (385)
T 2pg0_A 18 RAAFRKFLEKEAYPHYNDWEKRGIIPRSFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINEELEKVGSSLVGIGL--HN 95 (385)
T ss_dssp HHHHHHHHHHHTTTTHHHHHHHTSCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHHHCGGGHHHHH--HH
T ss_pred HHHHHHHHHHhCchhHHHHHhcCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHhhCCchHHHHH--Hh
Confidence 3455 8877 889999999999999999999999999999988 999999999999999999999999 8888755 55
Q ss_pred hHHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEE
Q 017183 78 SLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR 157 (376)
Q Consensus 78 ~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~ 157 (376)
.++..++..+|+++||++|++.+.+|+.++++++|||++|||+..+.|+|++++|||+|||+|.|+||+..||+++|+|+
T Consensus 96 ~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~ 175 (385)
T 2pg0_A 96 DIVTPYIASYGTEEQKQKWLPKCVTGELITAIAMTEPGAGSDLANISTTAVKDGDYYIVNGQKTFITNGIHADLIVVACK 175 (385)
T ss_dssp HTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCSEEEEEEE
T ss_pred hHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCCCcCHhhCeEEEEEcCCEEEEEeEEecccCCcccCEEEEEEE
Confidence 45667888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCC-----CCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCC-CcHHHHHHHhhHhHHHHHHH
Q 017183 158 NTTT-----NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQ 231 (376)
Q Consensus 158 ~~~~-----~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-~~~~~~~~~~~~~rl~~aa~ 231 (376)
++++ +++++|+||.+.|||++.++|+++|++++++++|.||||+||+++++|.+ +++......+...|+.+++.
T Consensus 176 ~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~ 255 (385)
T 2pg0_A 176 TDPQAKPPHRGISLLVVERDTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGFYYLMEKLQQERLVVAIA 255 (385)
T ss_dssp SCTTCSSGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCCEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred eCCccCCCCCceEEEEEeCCCCCeEecCCccccccCCCceEEEEEcceEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 8632 26899999999999999999999999999999999999999999999876 56777788888999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhhHHHHHHHHHHH
Q 017183 232 PIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARE 311 (376)
Q Consensus 232 ~lG~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~a~~ 311 (376)
++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.+
T Consensus 256 ~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~~a~e~a~~ 335 (385)
T 2pg0_A 256 AQTAAEVMFSLTKQYVKQRTAFGKRVSEFQTVQFRLAEMATEIALGRTFVDRVIEEHMAGKQIVTEVSMAKWWITEMAKR 335 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998876677889999999999999
Q ss_pred HHHHHHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHH
Q 017183 312 TVALGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREV 359 (376)
Q Consensus 312 ~~~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~ 359 (376)
+++.++|++||.||..+++++|+|||++...+++|++++++..|++.+
T Consensus 336 ~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~l 383 (385)
T 2pg0_A 336 VAAEAMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTNEMMKTIIARQL 383 (385)
T ss_dssp HHHHHHHHTGGGGGBTTSHHHHHHHHGGGGGTTTSCHHHHHHHHHHHT
T ss_pred HHHHHHHHhCccccCCCCcHHHHHhhhcCceeecCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999874
No 19
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.5e-65 Score=490.91 Aligned_cols=360 Identities=27% Similarity=0.401 Sum_probs=340.0
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCCCCH--HHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHh
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAEFPF--HVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVH 76 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~ 76 (376)
++.+ +|++ ++.|.+.+.|+++.+|. ++|++|++.||+++.+ ++|||.|+++.+.+.++|+++++|+++++.+.+|
T Consensus 21 ~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~ 100 (394)
T 1ivh_A 21 RQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAH 100 (394)
T ss_dssp HHHHHHHHHHHTTTTHHHHHHHTCCTTHHHHHHHHHHHTCTTTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCChhHHHHHhcCCCCchHHHHHHHHHCCCCCCCCCcccCCCCCCHHHHHHHHHHHHhhchhHHHHHHHh
Confidence 3455 8887 88999999999999999 9999999999999988 9999999999999999999999999999988887
Q ss_pred hhHHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEE
Q 017183 77 SSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA 156 (376)
Q Consensus 77 ~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a 156 (376)
..++..++..+|+++||++|++.+.+|+.++++++|||+.|||+..+.|+|++++|||+|||+|.|+||+..||+++|+|
T Consensus 101 ~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~vs~~~~Ad~~~v~a 180 (394)
T 1ivh_A 101 SNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYA 180 (394)
T ss_dssp HTTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEETGGGCSEEEEEE
T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCcCcccceEEEEEcCCEEEEEeEEEeeCCCCcCCEEEEEE
Confidence 64567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCC-----CCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCC-CcHHHHHHHhhHhHHHHHH
Q 017183 157 RNTTT-----NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAW 230 (376)
Q Consensus 157 ~~~~~-----~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-~~~~~~~~~~~~~rl~~aa 230 (376)
+++++ +++++|+||.+.|||++.+.|+++|+++++++++.||||+||+++++|.. +++......+...|+.+++
T Consensus 181 r~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa 260 (394)
T 1ivh_A 181 KTDLAAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAG 260 (394)
T ss_dssp ESCTTCSSGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHTH
T ss_pred EeCCcccCCCCCeEEEEEeCCCCCeEeccccccccCCCCCeeEEEECcEEEcHHHcCCCCCchHHHHHHHHHHHHHHHHH
Confidence 98643 36889999999999999999999999999999999999999999999876 5677778888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhhHHHHHHHHHH
Q 017183 231 QPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARAR 310 (376)
Q Consensus 231 ~~lG~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~a~ 310 (376)
.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++++.+.
T Consensus 261 ~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~ 340 (394)
T 1ivh_A 261 GPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVILYSAECAT 340 (394)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCeeCCcchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999887667778999999999999
Q ss_pred HHHHHHHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhc
Q 017183 311 ETVALGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTG 361 (376)
Q Consensus 311 ~~~~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~ 361 (376)
++++.++|++||.||.++++++|+|||++...+++|++++++..|++.+++
T Consensus 341 ~~~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~ll~ 391 (394)
T 1ivh_A 341 QVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRAFNA 391 (394)
T ss_dssp HHHHHHHHHHGGGGGBTTSTHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCccccCCchHHHHHHhcccccccCChHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999975
No 20
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=8.1e-65 Score=485.50 Aligned_cols=359 Identities=26% Similarity=0.367 Sum_probs=336.6
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhh
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 78 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~ 78 (376)
++.+ +|++ ++.|.+.+.|+++.+|+++|++|++.||+++.+ ++|||.|+++.+.+.++|+++++|+++++.+..|.
T Consensus 27 ~~~~r~~~~~~~~~~~~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~- 105 (393)
T 1rx0_A 27 QKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALATGCTSTTAYISIHN- 105 (393)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHTCCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhCCccHHHHhhcCCCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHHhCcchhHHHHHhH-
Confidence 3455 8888 888999999999999999999999999999988 99999999999999999999999999988887776
Q ss_pred HHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEEe
Q 017183 79 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN 158 (376)
Q Consensus 79 ~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~~ 158 (376)
++..++..+|+++||++|++.+.+|+.++++++|||+.|||+..+.|+|++++|||+|||+|.|+||+..||+++|+|++
T Consensus 106 ~~~~~l~~~g~~~qk~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~ 185 (393)
T 1rx0_A 106 MCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKAFISGAGESDIYVVMCRT 185 (393)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEES
T ss_pred HHHHHHHHHCCHHHHHHHHHHHhCCCceEEEEecCCCCCcCcccceeEEEEcCCEEEEEeEEEeecCCccCCEEEEEEEc
Confidence 56778899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC--CCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCC-CcHHHHHHHhhHhHHHHHHHHHHH
Q 017183 159 TTT--NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIGI 235 (376)
Q Consensus 159 ~~~--~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-~~~~~~~~~~~~~rl~~aa~~lG~ 235 (376)
++. +++++|+||.+.|||++.+.|+++|++++++++|.||||+||+++++|.. .++......+...|+.+++.++|+
T Consensus 186 ~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~ 265 (393)
T 1rx0_A 186 GGPGPKGISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGRINIASCSLGA 265 (393)
T ss_dssp SSSSGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCceEEEEEeCCCCCeEecCcccccccCCCCceEEEEcCeEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 643 46899999999999999999999999999999999999999999999876 567777778888999999999999
Q ss_pred HHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-ChhhhhhHHHHHHHHHHHHHH
Q 017183 236 SMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAM-TPGHASLGKSWITARARETVA 314 (376)
Q Consensus 236 ~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~K~~~~~~a~~~~~ 314 (376)
++++++.+++|+++|++||+||+++|.+|+++++|.++++++|++++++++.++.+.. ....++++|.++++.+.++++
T Consensus 266 a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~aK~~a~~~a~~v~~ 345 (393)
T 1rx0_A 266 AHASVILTRDHLNVRKQFGEPLASNQYLQFTLADMATRLVAARLMVRNAAVALQEERKDAVALCSMAKLFATDECFAICN 345 (393)
T ss_dssp HHHHHHHHHHHHHHCEETTEEGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999988643 356689999999999999999
Q ss_pred HHHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhc
Q 017183 315 LGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTG 361 (376)
Q Consensus 315 ~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~ 361 (376)
.++|++||.||..+++++|+|||++...+++|++++++..|++.+++
T Consensus 346 ~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 392 (393)
T 1rx0_A 346 QALQMHGGYGYLKDYAVQQYVRDSRVHQILEGSNEVMRILISRSLLQ 392 (393)
T ss_dssp HHHHHTGGGGGBTTSTHHHHHHHHHHTTTSSSCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCeeecCCChHHHHHHhccCceecCChHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999874
No 21
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=100.00 E-value=7.9e-65 Score=485.70 Aligned_cols=363 Identities=36% Similarity=0.588 Sum_probs=339.5
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCCCCHHHHHHHHhcCCccCcccccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhhH
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSL 79 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~~ 79 (376)
++.+ +|++ ++.|...+.|+++.+|+++|++|++.||+++.+++|||.|+++.+...++|+++++|+++++.+..|..+
T Consensus 22 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~~~~GG~g~~~~~~~~~~eel~~~~~~~~~~~~~~~~~ 101 (392)
T 1siq_A 22 RDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSL 101 (392)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHTCCCTHHHHHHHHTTCSSTTCEETTEECCCHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCcchHHHHhhCCCCHHHHHHHHhCCCCcccHHhhCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHhH
Confidence 3455 8887 8888888999999999999999999999998559999999999999999999999999988776666545
Q ss_pred HHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEe--CCEEEEeeeeecccCCCCCCEEEEEEE
Q 017183 80 AMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKV--EGGWILEGQKRWIGNSTFADVLVIFAR 157 (376)
Q Consensus 80 ~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~--~~g~~l~G~k~~~s~~~~ad~~~v~a~ 157 (376)
+...+..+|+++||++|++.+.+|+.++++++|||+.|||+..+.|+|+++ +|||+|||+|.|+||+..||+++|+|+
T Consensus 102 ~~~~l~~~g~~~q~~~~l~~l~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~a~ 181 (392)
T 1siq_A 102 VMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWAR 181 (392)
T ss_dssp THHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEEEEEEEEETGGGCSEEEEEEE
T ss_pred HHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEECCCCCCcCccccEEEEEEeCCCCEEEEEEEEEeecCCcccCEEEEEEE
Confidence 566788899999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred eCCCCCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCCCcHHHHHHHhhHhHHHHHHHHHHHHH
Q 017183 158 NTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISM 237 (376)
Q Consensus 158 ~~~~~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~~~~~~~~~~~~~~rl~~aa~~lG~~~ 237 (376)
+++ +++++|+||.+.|||++.+.|+++|+++++++++.||||+||++++++..+++......+...|+.+++.++|+++
T Consensus 182 ~~~-g~~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~g~~~~~~~l~~~r~~~aa~~~G~a~ 260 (392)
T 1siq_A 182 CED-GCIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGASSLGGPFGCLNNARYGIAWGVLGASE 260 (392)
T ss_dssp ETT-SCEEEEEEETTCTTEECCBCCCCSSSTTSCEEEEEEEEEEEEGGGBCTTCCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECC-CCEEEEEEeCCCCCeEeccccccccccCCceEEEEEccEEECHHHcCCcccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 964 4588999999999999999999999999999999999999999999987667777777888899999999999999
Q ss_pred HHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhhHHHHHHHHHHHHHHHHH
Q 017183 238 GVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGR 317 (376)
Q Consensus 238 ~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~a~~~~~~~~ 317 (376)
++++.+++|+++|++||+||+++|.+|++|++|.+++++++++++++++.++.+.+....++++|.++++.+.++++.++
T Consensus 261 ~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~d~~~~~~~~~~~aK~~~~~~a~~v~~~a~ 340 (392)
T 1siq_A 261 FCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHACLQLGRLKDQDKAAPEMVSLLKRNNCGKALDIARQAR 340 (392)
T ss_dssp HHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998776667789999999999999999999
Q ss_pred HHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhcccCC
Q 017183 318 ELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTGIASF 365 (376)
Q Consensus 318 ~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~~~ 365 (376)
|++||.||..+++++|+|||++...+++|++++++..+++.++|+|.+
T Consensus 341 q~~Gg~g~~~~~~l~r~~Rd~~~~~~~~G~~~~~~~~i~~~llgl~~~ 388 (392)
T 1siq_A 341 DMLGGNGISDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAITGIQAF 388 (392)
T ss_dssp HHTGGGGGSGGGSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHSCCCS
T ss_pred HHhCCccccCCCcHHHHHhhCcCCeeecCcHHHHHHHHHHHHhCcccc
Confidence 999999999999999999999999999999999999999999998765
No 22
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=100.00 E-value=7.5e-65 Score=486.78 Aligned_cols=361 Identities=26% Similarity=0.443 Sum_probs=340.0
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCCCC-HHHHHHHHhcCCccCcc-cccCCCCC--CHHHHHHHHHHHHccCCchhHHHHH
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAEFP-FHVIPKLGALRVAGGTI-KGYGCPGH--SVTGAAIAIAEIARVDASCSTFILV 75 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~~~-~~~~~~l~~~Gl~~~~~-~~~GG~g~--~~~~~~~~~~~la~~~~s~~~~~~~ 75 (376)
++.+ +|++ ++.|.+.+.|+++.+| +++|++|++.||+++.+ ++|||.|+ ++.+...++|+++++|+++++.+.+
T Consensus 13 ~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~~~v~eela~~~~~~~~~~~~ 92 (397)
T 3mpi_A 13 QKEVRNFVNKKIVPFADQWDNENHFPYEEAVRPMGELGFFGTVIPEEYGGEGMDQGWLAAMIVTEEIARGSSALRVQLNM 92 (397)
T ss_dssp HHHHHHHHHHHTTTTHHHHHHHTCCCTTTTHHHHHHTTTTCTTSCGGGTSCCCTTHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHhCChhHHHHHhcCCCCHHHHHHHHHHCCCCccCCChhhCCCCCCCCHHHHHHHHHHHHhhCchHHHHHHH
Confidence 4556 8998 8999999999999999 99999999999999988 99999999 9999999999999999999998888
Q ss_pred hhhHHHH-HHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEE
Q 017183 76 HSSLAML-TIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 154 (376)
Q Consensus 76 ~~~~~~~-~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v 154 (376)
|. ++.. ++..+|+++||++|++.+.+|+.++++++|||..|||+..+.|+|++++|||+|||+|.|+||+..||+++|
T Consensus 93 ~~-~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v 171 (397)
T 3mpi_A 93 EV-LGCAYTILTYGSEALKKKYVPKLSSAEFLGGFGITEPDAGSDVMAMSSTAEDKGDHWLLNGSKTWISNAAQADVLIY 171 (397)
T ss_dssp HT-TTTHHHHHHHSCHHHHHHHHHHHHTTSSCCCEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEETTTTCSSEEE
T ss_pred HH-HhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeEEEEEeCCEEEEEEEEEeeCCCcccCEEEE
Confidence 75 4555 889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCC---CCeEEEEE-eCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCC-CcHHHHHHHhhHhHHHHH
Q 017183 155 FARNTTT---NQINGYLV-KKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVA 229 (376)
Q Consensus 155 ~a~~~~~---~~~~~flV-~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-~~~~~~~~~~~~~rl~~a 229 (376)
+|++++. +++++|+| |.+.|||++ +.|+++|+++++++++.||||+||+++++|.+ +++......+...|+.++
T Consensus 172 ~a~~~~~~~~~g~~~flV~~~~~~Gv~v-~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~~~~~r~~~a 250 (397)
T 3mpi_A 172 YAYTDKAAGSRGLSAFVIEPRNFPGIKT-SNLEKLGSHASPTGELFLDNVKVPKENILGKPGDGARIVFGSLNHTRLSAA 250 (397)
T ss_dssp EEESCGGGGGGSEEEEEECTTTSTTEEE-EECCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCCCCceEEEEEEcCCCCCeEe-ccCccccCcCCceeEEEEeeEEECHHHcCCCCCchHHHHHHHHHHHHHHHH
Confidence 9998643 46899999 999999999 99999999999999999999999999999876 567788888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCChhhhhhHHHHHHHH
Q 017183 230 WQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKG-AMTPGHASLGKSWITAR 308 (376)
Q Consensus 230 a~~lG~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~K~~~~~~ 308 (376)
+.++|+++++++.+++|+++|++||+|++++|.+|+++++|.+++++++++++++++.++.+ .+....++++|.++++.
T Consensus 251 a~~lG~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~aK~~a~~~ 330 (397)
T 3mpi_A 251 AGGVGLAQACLDAAIKYCNERRQFGKPIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKDEGRLNNGLDVAMAKYAAGEA 330 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCcccCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999987 55667789999999999
Q ss_pred HHHHHHHHHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHH-HHHhcccCC
Q 017183 309 ARETVALGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTG-REVTGIASF 365 (376)
Q Consensus 309 a~~~~~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~-~~~l~~~~~ 365 (376)
+.++++.++|++||.||..+++++|+|||+++..+++|++++++..|+ +.+ |+|..
T Consensus 331 a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~l-gl~~~ 387 (397)
T 3mpi_A 331 VSKCANYAMRILGAYGYSTEYPVARFYRDAPTYYMVEGSANICKMIIALDQL-GVRKA 387 (397)
T ss_dssp HHHHHHHHHHHHGGGGGSTTSHHHHHHHHTTHHHHSSSCHHHHHHHHHHHHH-TSSCC
T ss_pred HHHHHHHHHHHhCCeeecCCCCHHHHHhhccceeeecCHHHHHHHHHHHHhc-CCCcc
Confidence 999999999999999999999999999999999999999999999999 766 88765
No 23
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=5e-64 Score=483.67 Aligned_cols=361 Identities=20% Similarity=0.218 Sum_probs=328.3
Q ss_pred hhHH-hHHH-HhcchhHhhhhhCC------------------CCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHH
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKAE------------------FPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIA 60 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~~------------------~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~ 60 (376)
++.+ +|++ ++.|...+.|+.+. +|+++|++|++.||+++.+ ++|||.|+++.+.+.++|
T Consensus 17 ~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~G~~~~~~P~~~GG~g~~~~~~~~v~e 96 (415)
T 4hr3_A 17 IAAVREFIDAEVMPVERAVLAHHDELLGARAGTTAELWHVPPELDSLKAKARAAGLWNLFLPDPELGGGLSNSEYAPLAE 96 (415)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCSCSGGGGSCCTHHHHHHHHHHHTTCSSTTCCCTTTSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCccHHHHhhhccccccccccccccccCcchhHHHHHHHHHhCCCcCcCCCHHHCCCCCCHHHHHHHHH
Confidence 4455 8888 67888888776542 6789999999999999988 999999999999999999
Q ss_pred HHHccCCchhHHHH-HhhhHHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCC-CCCCcCCCeeEEEEeCCEEEEee
Q 017183 61 EIARVDASCSTFIL-VHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPA-YGSDASALNTTATKVEGGWILEG 138 (376)
Q Consensus 61 ~la~~~~s~~~~~~-~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~-~g~~~~~~~~~a~~~~~g~~l~G 138 (376)
+++++|.+..+... .+...+..+|..+|+++||++|++.+.+|+.++++++|||+ +|||+..+.|+|++++|||+|||
T Consensus 97 el~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~~gsd~~~~~t~A~~~g~g~~lnG 176 (415)
T 4hr3_A 97 QMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQKEVWLEPLLEGDIRSAFCMTEPDVASSDATNMAATAVVEGDEVVING 176 (415)
T ss_dssp HHTTCSSHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHTTSCEEEEECCCTTSCTTSGGGCCCEEEEETTEEEEEE
T ss_pred HHhcccchHHHHHHhccccchHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCchhhCeeEEEEECCEEEEee
Confidence 99998854433221 12222346789999999999999999999999999999999 99999999999999999999999
Q ss_pred eeecccCCCC--CCEEEEEEEeCCC----CCeEEEEEeCCCCCeeeccccccccccccc--ceeEEEcceecCCCCCcCC
Q 017183 139 QKRWIGNSTF--ADVLVIFARNTTT----NQINGYLVKKDAPGLTVTKIENKIGLRIVQ--NGDILLKKVFVPDEDRLPG 210 (376)
Q Consensus 139 ~k~~~s~~~~--ad~~~v~a~~~~~----~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~--~~~v~f~~v~Vp~~~~lg~ 210 (376)
+|.|+||+.+ ||+++|+|+++++ +++++|+||.+.|||++.++|+++|+++++ +++|.||||+||++++||.
T Consensus 177 ~K~~is~a~~~~Ad~~~v~a~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~~~v~fddv~Vp~~~~lg~ 256 (415)
T 4hr3_A 177 RKWWSTGVGHPDCKVIIFMGLTDPNAHRYARHSMVLVPMDTPGITVERMLPTMGFYDEPGGHGVVSFDNVRLPADAFIAG 256 (415)
T ss_dssp EEEEEETTTSTTEEEEEEEEECCTTSCTTSSEEEEEEETTSTTEEEEEECCBTTBCCTTTCEEEEEEEEEEEEGGGBSSC
T ss_pred EEeeECCCCCCCCCEEEEEEEeCCCCCCCCceEEEEEEcCCCceEecCCCCccccCCCCCCeeEEEEccEEECHHHcCCC
Confidence 9999999966 9999999999643 579999999999999999999999999987 9999999999999999987
Q ss_pred C-CcHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017183 211 V-NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYE 289 (376)
Q Consensus 211 ~-~~~~~~~~~~~~~rl~~aa~~lG~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~ 289 (376)
. +++......+..+|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++
T Consensus 257 ~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d 336 (415)
T 4hr3_A 257 PGKGFEIAQGRLGPGRVHHAMRLIGLAEVALEHACRRGLDRTAFGKPLVNLGGNRERIADARIAINQTRLLVLHAAWLLD 336 (415)
T ss_dssp TTCHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 577888888999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred c--CCCChhhhhhHHHHHHHHHHHHHHHHHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhcc
Q 017183 290 K--GAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTGI 362 (376)
Q Consensus 290 ~--~~~~~~~~~~~K~~~~~~a~~~~~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~ 362 (376)
. +.+....++++|.++++.+.++++.++|++||.||.++++++|+|||+++..+++|++++++..|++.+++.
T Consensus 337 ~~~~~~~~~~~~~aK~~a~e~a~~v~~~a~qi~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~l~~ 411 (415)
T 4hr3_A 337 TVGIMGALSAVSEIKVAAPNMAQQVIDMAIQIHGGGGLSNDFPLAAAWVNARALRLADGPDEVHRGVVARIELAK 411 (415)
T ss_dssp HTCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSSSSSHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHT
T ss_pred hccCCchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCchHHHHHHHhhhheeecCcHHHHHHHHHHHHHHH
Confidence 7 445566789999999999999999999999999999999999999999999999999999999999999874
No 24
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=1.6e-63 Score=496.48 Aligned_cols=359 Identities=27% Similarity=0.439 Sum_probs=330.8
Q ss_pred hhHH-hHHH-HhcchhHhhhhhC-CCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhh
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEKA-EFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHS 77 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~~-~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~ 77 (376)
++.+ +|++ ++.|...+.|+.+ .+|+++|++|.+.||+++.+ ++|||.|+++.+.+.++|+++++++ .+..+..|.
T Consensus 41 ~~~vr~f~~~~~~p~~~~~d~~~~~~~~~~~~~l~e~Gl~gl~vPee~GG~G~~~~~~~~v~Eel~~~~~-~~~~~~~~~ 119 (597)
T 3owa_A 41 AKTTEDFIVNEVLPELEYLEQHEFDRSVRLLKEAGELGLLGADVPEEYGGIGLDKVSSALIAEKFSRAGG-FAITHGAHV 119 (597)
T ss_dssp HHHHHHHHHHHTGGGHHHHTTTCHHHHHHHHHHHHHTTTTCTTSCGGGTCCCCCHHHHHHHHHHHGGGTH-HHHHHHHHH
T ss_pred HHHHHHHHHHhCchhHHHHHhcCCcCCHHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHHccch-HHHHHHHHH
Confidence 4455 8988 7899988888765 68999999999999999988 9999999999999999999999864 445555666
Q ss_pred hHHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEe--CCEEEEeeeeecccCCCCCCEEEEE
Q 017183 78 SLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKV--EGGWILEGQKRWIGNSTFADVLVIF 155 (376)
Q Consensus 78 ~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~--~~g~~l~G~k~~~s~~~~ad~~~v~ 155 (376)
.++...+..+|+++||++|+|.+.+|+.++++++|||++|||+....|+|+++ +++|+|||+|.|+||+..||+++|+
T Consensus 120 ~~~~~~l~~~Gt~eQk~~~Lp~la~Ge~~~a~alTEp~aGSD~~~~~T~A~~~~dG~~yvLnG~K~~is~a~~Ad~~lV~ 199 (597)
T 3owa_A 120 GIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVY 199 (597)
T ss_dssp TTTTHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEE
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhCCCcceeeEecCCCCCCCcccceeEEEEeCCCCEEEEeeEEEEeCCCccCCEEEEE
Confidence 55666788999999999999999999999999999999999999999999995 4469999999999999999999999
Q ss_pred EEeCCCCCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCC-CcHHHHHHHhhHhHHHHHHHHHH
Q 017183 156 ARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIG 234 (376)
Q Consensus 156 a~~~~~~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-~~~~~~~~~~~~~rl~~aa~~lG 234 (376)
|++++ +++++|+||.+.|||++.+.|+++|+++++++++.|+||+||+++++|.. +++......++.+|+.+++.++|
T Consensus 200 Art~~-~g~s~flV~~~~pGv~v~~~~~~~Glrgs~t~~v~fddV~VP~~~lLG~~g~G~~~~~~~l~~~R~~~aa~~lG 278 (597)
T 3owa_A 200 AKIDG-EHFSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNILNIGRYKLGVGTVG 278 (597)
T ss_dssp EEETT-TEEEEEEEETTSTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCC-CceEEEEEeCCCCCeEEecccccccCCCCCceEEEEeceeecHHHhcCcccchHHHHHHhhHhHHHHHHHHHHH
Confidence 99964 57999999999999999999999999999999999999999999999876 67788889999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-------------------Ch
Q 017183 235 ISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAM-------------------TP 295 (376)
Q Consensus 235 ~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~-------------------~~ 295 (376)
+++++++.+++|+++|++||+||++||.+|++|++|.++++++|++++++++.++.+.. ..
T Consensus 279 ~a~~al~~a~~ya~~R~qfG~pi~~~q~vq~~LA~m~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (597)
T 3owa_A 279 SAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYA 358 (597)
T ss_dssp HHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHCHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHhCeeCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhhhhhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999998876421 23
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhcc
Q 017183 296 GHASLGKSWITARARETVALGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTGI 362 (376)
Q Consensus 296 ~~~~~~K~~~~~~a~~~~~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~ 362 (376)
..++++|.++++.+.++++.++|+|||+||+.+++++|+|||++...+++|++.+++..|++.+++.
T Consensus 359 ~~~s~aK~~ase~a~~v~~~a~qi~GG~G~~~e~~ler~~RDar~~~i~eGt~ei~r~~Ia~~ll~~ 425 (597)
T 3owa_A 359 IECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRK 425 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCccccccChHHHHHHHhhhhheeCcHHHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999999999999999999999999999999875
No 25
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=1.7e-62 Score=489.32 Aligned_cols=358 Identities=29% Similarity=0.405 Sum_probs=329.3
Q ss_pred hHH-hHHH-HhcchhHhhhhh-CCCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhh
Q 017183 3 QRV-DFCI-FFLNLLFQYWEK-AEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 78 (376)
Q Consensus 3 ~~~-~f~~-~~~~~~~~~d~~-~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~ 78 (376)
+.+ +|++ ++.|...+.++. ..+|+++|+.|++.||+++.+ ++|||.|++..+.+.++|++ ..|+++++.+..|.+
T Consensus 37 ~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~l~e~Gl~~l~vPee~GG~g~~~~~~~~v~eel-~~~~s~~~~~~~~~~ 115 (577)
T 2z1q_A 37 RTTRTFVEREVLPLLERMEHGELELNVPLMRKAGELGLLAIDVPEEYGGLDLPKVISTVVAEEL-SGSGGFSVTYGAHTS 115 (577)
T ss_dssp HHHHHHHHTTTHHHHHHHHTTCGGGHHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHH-TTSCTHHHHHHHHHT
T ss_pred HHHHHHHhccCchhHHhhhcccCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHH-hhcccHHHHHhhhHH
Confidence 445 7887 677775555432 378999999999999999988 99999999999999999999 789999988888865
Q ss_pred HHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEe--CCEEEEeeeeecccCCCCCCEEEEEE
Q 017183 79 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKV--EGGWILEGQKRWIGNSTFADVLVIFA 156 (376)
Q Consensus 79 ~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~--~~g~~l~G~k~~~s~~~~ad~~~v~a 156 (376)
++..+|..+|+++||++|+|.+.+|+.++|+++|||++|||+..+.|+|+++ +++|+|||+|.|+||+..||+++|+|
T Consensus 116 ~~~~~l~~~Gt~eQk~~~Lp~l~~G~~~~a~alTEp~aGSD~~~~~t~A~~~~dG~~~vLnG~K~~it~a~~Ad~~~V~A 195 (577)
T 2z1q_A 116 IGTLPLVYFGTEEQKRKYLPKLASGEWIAAYCLTEPGSGSDALAAKTRATLSEDGKHYILNGVKQWISNAGFAHLFTVFA 195 (577)
T ss_dssp TTTHHHHHHCCHHHHHTTHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEE
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeeEEEEeCCCCEEEEEEEeeCCCCCCccCEEEEEE
Confidence 5666789999999999999999999999999999999999999999999994 55799999999999999999999999
Q ss_pred EeCCCCCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCC-CcHHHHHHHhhHhHHHHHHHHHHH
Q 017183 157 RNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIGI 235 (376)
Q Consensus 157 ~~~~~~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-~~~~~~~~~~~~~rl~~aa~~lG~ 235 (376)
++++ +++++|+||++.|||++.+.|+++|+++++++.+.|+||+||.+++||.. +++......++.+|+.+++.++|+
T Consensus 196 r~~g-~gis~flVp~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~VP~~~llg~~g~g~~~~~~~l~~~R~~~aa~~~G~ 274 (577)
T 2z1q_A 196 KVDG-EHFTAFLVERDTPGLSFGPEEKKMGIKASSTRQVILEDVKVPVENVLGEIGKGHKIAFNVLNVGRYKLGAGAVGG 274 (577)
T ss_dssp EETT-TEEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCC-CeeEEEEEeCCCCCeEecCCCCCCCCCCCceeEEEecceeccHHHccCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9964 67999999999999999999999999999999999999999999999876 678888888999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------------CCChhhhhhH
Q 017183 236 SMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKG--------------AMTPGHASLG 301 (376)
Q Consensus 236 ~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~--------------~~~~~~~~~~ 301 (376)
++++++.+++|+++|++||+||++||.+|++|++|.+.+++++++++.++..++.+ .+....++++
T Consensus 275 a~~al~~a~~ya~~R~qfg~pi~~~q~vq~~La~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~a~a 354 (577)
T 2z1q_A 275 AKRALELSAQYATQRVQFGRPIGRFGLIQQKLGEMASRIYAAESAVYRTVGLIDEALLGKKGPEAVMAGIEEYAVEASII 354 (577)
T ss_dssp HHHHHHHHHHHHHHCBCSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccchhhhhcchhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888764 1334567899
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhcc
Q 017183 302 KSWITARARETVALGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTGI 362 (376)
Q Consensus 302 K~~~~~~a~~~~~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~ 362 (376)
|.++++.+.++++.++|+|||+||+.+++++|+|||+++..+++|++.+++..|++++++.
T Consensus 355 K~~ase~a~~v~~~a~qi~GG~G~~~e~~l~r~~Rda~~~~i~eGt~~i~~~~ia~~~l~~ 415 (577)
T 2z1q_A 355 KVLGSEVLDYVVDEGVQIHGGYGYSQEYPIERAYRDARINRIFEGTNEINRLLIPGMLLRR 415 (577)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHGGGGTTTSCHHHHHHHTTGGGSCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeecCCChHHHHHhhCcceeeeCcHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998865
No 26
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=100.00 E-value=1.4e-61 Score=469.81 Aligned_cols=368 Identities=18% Similarity=0.222 Sum_probs=329.0
Q ss_pred hhHH-hHHH-HhcchhHhhhh----hC-CCC--HHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhH
Q 017183 2 KQRV-DFCI-FFLNLLFQYWE----KA-EFP--FHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCST 71 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~----~~-~~~--~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~ 71 (376)
++.+ +|++ ++.|...+.++ .+ .+| +++|++|++.||+++.+ ++|||.|+++.+.+.++|+|++.|+++++
T Consensus 15 ~~~~r~f~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~ 94 (438)
T 3mkh_A 15 YQAARSLARNLLMPARQTYLQHPPNSPLRFQSTQPTYAAAVSAGILKGQISPAHGGTGGTLIESAILVEECYSVEPSAAL 94 (438)
T ss_dssp HHHHHHHHHHTHHHHHHHHTTSCTTCHHHHHTTHHHHHHHHHTTTTGGGSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHhhccccccCcCCCcHHHHHHHHhCCCCCCCCCcccCCCCCCHHHHHHHHHHHHhhChhHHH
Confidence 4455 8888 77777766643 33 565 89999999999999988 99999999999999999999999999988
Q ss_pred HHHHhhhHHHHHHHhcCCHHHHHhhhHHhhcC--cceeEEEeeCCCCCC-----CcCCCeeEEEEeCCEEEEeeeeeccc
Q 017183 72 FILVHSSLAMLTIALCGSEEQKQKYLPSLAQL--NTIACWALTEPAYGS-----DASALNTTATKVEGGWILEGQKRWIG 144 (376)
Q Consensus 72 ~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g--~~~~~~a~te~~~g~-----~~~~~~~~a~~~~~g~~l~G~k~~~s 144 (376)
.+..|. ++...+..+|+++ |++|++.+.+| +.++++++|||++|+ |+..++|+|++++|||+|||+|.|+|
T Consensus 95 ~~~~~~-~~~~~l~~~g~~~-~~~~l~~~~~G~g~~~~~~a~tEp~~gs~~~~sd~~~~~t~A~~~g~g~~lnG~K~~is 172 (438)
T 3mkh_A 95 TIFATG-LGLTPINLAAGPQ-HAEFLAPFLSGEGSPLASLVFSEPGGVANALEKGAPGFQTTARLEGDEWVINGEKMWAT 172 (438)
T ss_dssp HHHHHH-HHHHHHHHHCCGG-GHHHHGGGSSSCSCCCEEEECCCTTCCTTTTCTTSCCCSCEEEEETTEEEEEEEECSCT
T ss_pred HHHHhh-HHHHHHHhhCCHH-HHHHHHHHhcCCCCceEEEEEccCCCCCCccccccccceeEEEEeCCEEEEEeEEEEec
Confidence 776654 5666778899999 89999999986 589999999999998 58889999999999999999999999
Q ss_pred CCC-----CCCEEEEEEEeCC------C---CCeEEEEEeCCC-----CC-eeecccccccccccccceeEEEcceecCC
Q 017183 145 NST-----FADVLVIFARNTT------T---NQINGYLVKKDA-----PG-LTVTKIENKIGLRIVQNGDILLKKVFVPD 204 (376)
Q Consensus 145 ~~~-----~ad~~~v~a~~~~------~---~~~~~flV~~~~-----~G-v~~~~~~~~~G~~~~~~~~v~f~~v~Vp~ 204 (376)
|+. .||+++|+|++++ . +++++|+||.+. || |++.+.|+++|++++++++|.||||+||+
T Consensus 173 ~a~~~~~~~Ad~~~v~a~~~~~~~~~~~~~~~g~~~flV~~~~~~~~~pG~v~v~~~~~~~G~r~~~~~~v~fddv~VP~ 252 (438)
T 3mkh_A 173 NCAGWDFKGCDLACVVCRDATTPLEEGQDPENKVMIILVTRADLDRNGEGSFEVLRHVATPGHTSVSGPHVRYTNVRVPT 252 (438)
T ss_dssp TTTCTTSSCCSEEEEEEEECSSCCCTTCCGGGGEEEEEEEHHHHHHHCTTSEEEEECCCCSSCTTCCCCEEEEEEEEEEG
T ss_pred CCCccccccCcEEEEEEEecCcccCcccCCCCceEEEEEecCccccCCCCcEEecCcCCCcCCcCCCceEEEECcEEECH
Confidence 997 8999999999853 1 468999999875 98 99999999999999999999999999999
Q ss_pred CCCcCCC-CcHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhcccC-cccccchHHHHHHHHHHHHHHHHHHHHH
Q 017183 205 EDRLPGV-NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFG-APLAAFQINQQKLVQMLGNIQAMILVGW 282 (376)
Q Consensus 205 ~~~lg~~-~~~~~~~~~~~~~rl~~aa~~lG~~~~~l~~~~~~~~~r~~~g-~~i~~~~~v~~~la~~~~~~~a~~~~~~ 282 (376)
+++||.+ .++......+..+|+.+++.++|+++++++.+++|+++|++|| +||+++|.+|++|++|.++++++|++++
T Consensus 253 ~~~lg~~~~g~~~~~~~l~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~g~~pi~~~q~vq~~la~~~~~~~aar~~~~ 332 (438)
T 3mkh_A 253 KNVLCPAGQGAKVAFGAFDGSAVLVGAMGVGLMRAAFDAALKFAKEDNRGGAVPLLERQAFADLLSGVKIQTEAARALTW 332 (438)
T ss_dssp GGEEECTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSCGGGSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcEeCCCeeccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999876 5678888889999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHHHcCCCC----hhhhhhHHHHHHHHHHHHHHHHHHHhCCccccCcCcHHHHhhhhcCcccccchH-HHHHHHHHH
Q 017183 283 RLCKLYEKGAMT----PGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTY-DINTLVTGR 357 (376)
Q Consensus 283 ~~~~~~~~~~~~----~~~~~~~K~~~~~~a~~~~~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~-~~~~~~i~~ 357 (376)
++++.++.+... ...++++|.++++.+.++++.++|++||.||.++++++|+|||+++..+++|++ ++++..|++
T Consensus 333 ~aa~~~d~~~~~~~~~~~~~~~aK~~a~e~a~~~~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~i~~Gt~~~v~~~~i~r 412 (438)
T 3mkh_A 333 KAAHAMENGPGDYDARRELALAAKVFCSEAAVKACTDVINAVGISAYDLQRPFSDLLNTAVVLPIFDGGNVGIRRRHLQQ 412 (438)
T ss_dssp HHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGCTTSSHHHHHHHHTHHHHSSSCTTTTHHHHHHH
T ss_pred HHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhccCCCcHHHHHHHhheeeeecCChHHHHHHHHHH
Confidence 999999987543 223678999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHhcccCCCCccccc
Q 017183 358 EVTGIASFKPVALAT 372 (376)
Q Consensus 358 ~~l~~~~~~~~~~~~ 372 (376)
.+++.. +.|.+..+
T Consensus 413 ~ll~~~-~~~~~~~~ 426 (438)
T 3mkh_A 413 LMLKPT-YDAWSSTY 426 (438)
T ss_dssp HHHSTT-CCTTHHHH
T ss_pred HHHhcc-cCcccccc
Confidence 999864 33444443
No 27
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=100.00 E-value=7.3e-61 Score=478.70 Aligned_cols=351 Identities=25% Similarity=0.339 Sum_probs=323.4
Q ss_pred hHHH-HhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhhHHHHH
Q 017183 6 DFCI-FFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLT 83 (376)
Q Consensus 6 ~f~~-~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~~~~~~ 83 (376)
+|++ .+. ..+.|+...+|++.|+.|++.||+++.+ ++|||.|++..+.+.+.|+++++|+++++.+..|..++..+
T Consensus 63 ~~~~~~~~--~~~~d~~~~~p~~~~~~l~e~Gl~~l~~P~e~GG~gl~~~~~~~v~e~l~~~~~s~a~~~~~~~~~g~~~ 140 (607)
T 2uxw_A 63 RFFEEVND--PAKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKG 140 (607)
T ss_dssp HHHHHTCC--HHHHHHHTSCCHHHHHHHHHTTTTCTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTTTHH
T ss_pred HHHHhhcC--HHHhccccCCCHHHHHHHHHcCCcCCCCChhhCCCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 6776 333 2456778899999999999999999988 99999999999999999999999999999888776555678
Q ss_pred HHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeC--CEEEEeeeeecccCCCCCCEEEEEEEeCC-
Q 017183 84 IALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVE--GGWILEGQKRWIGNSTFADVLVIFARNTT- 160 (376)
Q Consensus 84 l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~--~g~~l~G~k~~~s~~~~ad~~~v~a~~~~- 160 (376)
|..+|+++||++|+|.+.+|+.++++++|||.+|||+..+.|+|++++ ++|+|||+|.|+|++..||+++|+|++++
T Consensus 141 l~~~Gt~eqk~~~Lp~l~~G~~~~~~alTEp~aGSD~~~~~t~A~~~~dG~~y~LnG~K~~is~~~~Ad~~lV~Ar~~~~ 220 (607)
T 2uxw_A 141 ILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVT 220 (607)
T ss_dssp HHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEEEEE
T ss_pred HHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceeEEEEeCCCCEEEEEeEEEeecCCcccCEEEEEEEecCC
Confidence 889999999999999999999999999999999999999999999974 47999999999999999999999999852
Q ss_pred -------CCCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCC-CcHHHHHHHhhHhHHHHHHHH
Q 017183 161 -------TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQP 232 (376)
Q Consensus 161 -------~~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-~~~~~~~~~~~~~rl~~aa~~ 232 (376)
.+++++|+||++.|||++.+.|+++|+++++++++.|+||+||.+++||.+ .++......++.+|+.+++.+
T Consensus 221 ~~~~g~~~~gis~flVp~~~~Gv~v~~~~~~~G~rg~~t~~v~fddv~VP~~~llG~~g~G~~~~~~~l~~~Rl~~aa~~ 300 (607)
T 2uxw_A 221 DPATGAVKEKITAFVVERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAAL 300 (607)
T ss_dssp CTTTCCEEEEEEEEEEEGGGSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCCceEEEEEeCCCCCeEEecCccccCCCCCCeeEEEeccEEecHHHhcCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 145899999999999999999999999999999999999999999999876 677888888999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CChhhhhhHHHHHHHHHHH
Q 017183 233 IGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGA-MTPGHASLGKSWITARARE 311 (376)
Q Consensus 233 lG~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~K~~~~~~a~~ 311 (376)
+|+++++++.+++|+++|++||+||+++|.+|++|++|.+.+++++++++.++..+|.+. +....++++|.++++.+.+
T Consensus 301 ~G~a~~al~~a~~ya~~R~qfG~pi~~~~~vq~~La~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~~aK~~~se~a~~ 380 (607)
T 2uxw_A 301 AGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKIFGSEAAWK 380 (607)
T ss_dssp HHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCCchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999988764 3346789999999999999
Q ss_pred HHHHHHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHH
Q 017183 312 TVALGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGRE 358 (376)
Q Consensus 312 ~~~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~ 358 (376)
+++.++|++||.||.++++++|+|||+++..+++|++.+++..|+..
T Consensus 381 v~~~a~qv~GG~G~~~e~~l~r~~Rda~~~~i~eGt~~i~~~~ia~~ 427 (607)
T 2uxw_A 381 VTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQ 427 (607)
T ss_dssp HHHHHHHHHTHHHHSSTTSHHHHHHHHGGGGTSSSCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCccccCccHHHHHHHhcccceeeCChHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998888433
No 28
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=100.00 E-value=2.3e-60 Score=461.20 Aligned_cols=365 Identities=19% Similarity=0.251 Sum_probs=328.4
Q ss_pred hhHH-hHHH-HhcchhHhhhhh----CCCC--HHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhHH
Q 017183 2 KQRV-DFCI-FFLNLLFQYWEK----AEFP--FHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTF 72 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~~~d~~----~~~~--~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~~ 72 (376)
++.+ +|++ ++.|...+.|+. +.+| +++|++|++.||+++.+ ++|||.|+++.+.+.++|+++++|+++++.
T Consensus 14 ~~~~r~f~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~ 93 (439)
T 2c12_A 14 RRHAQAFANTVLTKASAEYSTQKDQLSRFQATRPFYREAVRHGLIKAQVPIPLGGTMESLVHESIILEELFAVEPATSIT 93 (439)
T ss_dssp HHHHHHHHHHTGGGHHHHHTTCSSHHHHHHTTHHHHHHHHHTTTTGGGSBGGGTCCBCCHHHHHHHHHHHHTTCCTTHHH
T ss_pred HHHHHHHHHHhCChhHHHHhhcccccCCCCChHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhhChHHHHH
Confidence 3455 8888 788877776653 3555 89999999999999988 999999999999999999999999999988
Q ss_pred HHHhhhHHHHHHHhcCCHHHHHhhhHHhh--cCcceeEEEeeCCCCCC-----CcCCCeeEEEEeCCEEEEeeeeecccC
Q 017183 73 ILVHSSLAMLTIALCGSEEQKQKYLPSLA--QLNTIACWALTEPAYGS-----DASALNTTATKVEGGWILEGQKRWIGN 145 (376)
Q Consensus 73 ~~~~~~~~~~~l~~~g~~~q~~~~l~~~~--~g~~~~~~a~te~~~g~-----~~~~~~~~a~~~~~g~~l~G~k~~~s~ 145 (376)
+..|. ++..++..+|+++||++|++.+. +|+.++++++|||..|| |+..+.|+|++++|||+|||+|.|+||
T Consensus 94 ~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~~~G~~~~~~a~tEp~~Gs~~~~sd~~~~~t~A~~~~~g~~lnG~K~~is~ 172 (439)
T 2c12_A 94 IVATA-LGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKVGNEWVISGEKLWPSN 172 (439)
T ss_dssp HHHHH-HHHHHHHHSSCHHHHHHHTGGGGSSCSCCCEEEECCCTTCSTTTTCTTSCCCSCEEEEETTEEEEEEEEECCTT
T ss_pred HHHhH-HHHHHHHHhCCHHHHHHHHHHHhhcCCCEEEEEEecCCCCCCCccccccccceeEEEEcCCEEEEEeEEEeecC
Confidence 77775 56677889999999999999999 69999999999999987 577889999999999999999999999
Q ss_pred CC-----CCCEEEEEEEe-C----C-----C--CCeEEEEEeCCCC------CeeecccccccccccccceeEEEcceec
Q 017183 146 ST-----FADVLVIFARN-T----T-----T--NQINGYLVKKDAP------GLTVTKIENKIGLRIVQNGDILLKKVFV 202 (376)
Q Consensus 146 ~~-----~ad~~~v~a~~-~----~-----~--~~~~~flV~~~~~------Gv~~~~~~~~~G~~~~~~~~v~f~~v~V 202 (376)
+. .||+++|+|++ + + . +++++|+||.+.| ||++.+.|+++|++++++++|.|+||+|
T Consensus 173 ~~~~~~~~Ad~~~v~ar~~~~~~~~~~~~~~~~~g~~~flV~~~~pGv~~~~Gv~v~~~~~~~G~r~~~~~~v~fddv~V 252 (439)
T 2c12_A 173 SGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITTSGPHTRFTEFHV 252 (439)
T ss_dssp TTTTTSSCCSEEEEEEEECSCTTSCCCTTSCGGGGEEEEEECHHHHHTSCGGGEEEEECCCBSSCTTCCCCEEEEEEEEE
T ss_pred CCccccccCcEEEEEEEcCCcccCccccccCCCCceEEEEEECCCCcccCCCceEeCCcccccccCCCCceEEEEccEEe
Confidence 97 99999999998 5 2 1 3688999999998 8889999999999999999999999999
Q ss_pred CCCCCcCCC-CcHH-HHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHh-hcccCcccccchHHHHHHHHHHHHHHHHHH
Q 017183 203 PDEDRLPGV-NSFQ-DTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKE-RKQFGAPLAAFQINQQKLVQMLGNIQAMIL 279 (376)
Q Consensus 203 p~~~~lg~~-~~~~-~~~~~~~~~rl~~aa~~lG~~~~~l~~~~~~~~~-r~~~g~~i~~~~~v~~~la~~~~~~~a~~~ 279 (376)
|++++||.. .++. .....+...|+.+++.++|+++++++.+++|+++ |.+||+||+++|.+|++|++|.++++++|+
T Consensus 253 P~~~~lg~~~~g~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~rr~~~G~~i~~~q~vq~~la~~~~~~~aar~ 332 (439)
T 2c12_A 253 PHENLLCTPGLKAQGLVETAFAMSAALVGAMAIGTARAAFEEALVFAKSDTRGGSKHIIEHQSVADKLIDCKIRLETSRL 332 (439)
T ss_dssp EGGGBCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSSCGGGSHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhceeeCCeehhccHHHHHHHHHHHHHHHHHHH
Confidence 999999876 4566 7788889999999999999999999999999996 778999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCC----hhhhhhHHHHHHHHHHHHHHHHHHHhCCccccCcCcHHHHhhhhcCcccccchH-HHHHHH
Q 017183 280 VGWRLCKLYEKGAMT----PGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTY-DINTLV 354 (376)
Q Consensus 280 ~~~~~~~~~~~~~~~----~~~~~~~K~~~~~~a~~~~~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~-~~~~~~ 354 (376)
+++++++.++.+... ...++++|.++++.+.++++.++|++||.||..+++++|+|||++...+++|++ .+++..
T Consensus 333 ~~~~aa~~~~~~~~~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~G~~~~~~~~~ 412 (439)
T 2c12_A 333 LVWKAVTTLEDEALEWKVKLEMAMQTKIYTTDVAVECVIDAMKAVGMKSYAKDMSFPRLLNEVMCYPLFDGGNIGLRRRQ 412 (439)
T ss_dssp HHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGBTTSSHHHHHHHHTTTTTSSSCTTTTHHHH
T ss_pred HHHHHHHHHhCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCceEEcCCChHHHHHHhhhcceeecCChHHHHHHH
Confidence 999999999886543 235789999999999999999999999999999999999999999999999988 799999
Q ss_pred HHHHHhcccCCCCc
Q 017183 355 TGREVTGIASFKPV 368 (376)
Q Consensus 355 i~~~~l~~~~~~~~ 368 (376)
+++. +..|.+.|.
T Consensus 413 i~~~-l~~~~~~~~ 425 (439)
T 2c12_A 413 MQRV-MALEDYEPW 425 (439)
T ss_dssp HHHH-HTSTTCCTT
T ss_pred HHHH-Hhcccchhh
Confidence 9864 558888774
No 29
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-59 Score=454.91 Aligned_cols=359 Identities=18% Similarity=0.232 Sum_probs=315.9
Q ss_pred hhHH-hHHH-HhcchhH---hhhhh-----CC-----CCHHHHHHHHhcCCccCcccccCCCCCCHHHHHHHHHHHHccC
Q 017183 2 KQRV-DFCI-FFLNLLF---QYWEK-----AE-----FPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVD 66 (376)
Q Consensus 2 ~~~~-~f~~-~~~~~~~---~~d~~-----~~-----~~~~~~~~l~~~Gl~~~~~~~~GG~g~~~~~~~~~~~~la~~~ 66 (376)
++.+ +|++ ++.|... +.|+. .. +++++|++|++.||+++.+++ |.|+++.+...++|+++++|
T Consensus 31 ~~~~r~f~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~--G~g~~~~~~~~v~eel~~~~ 108 (428)
T 2wbi_A 31 LIKVKHFMKQHILPAEKEVTEFYVQNENSVDKWGKPLVIDKLKEMAKVEGLWNLFLPA--VSGLSHVDYALIAEETGKCF 108 (428)
T ss_dssp HHHHHHHHHHTHHHHHHHHHC----------CCSCCHHHHHHHHHHHHTTCCSTTCHH--HHCCCHHHHHHHHHHHTTST
T ss_pred HHHHHHHHHhhCCchhcchhHHhhhccccccccCCcccHHHHHHHHHHCCCCeecCCC--CCCCCHHHHHHHHHHHHhhc
Confidence 3445 7777 6667665 55432 23 347899999999999999833 88999999999999999998
Q ss_pred Cc-hhHHHHHhhhHHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCC-CCCCcCCCeeEEEEeCCEEEEeeeeeccc
Q 017183 67 AS-CSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPA-YGSDASALNTTATKVEGGWILEGQKRWIG 144 (376)
Q Consensus 67 ~s-~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~-~g~~~~~~~~~a~~~~~g~~l~G~k~~~s 144 (376)
++ .++....+...+...|..+|+++||++|++.+.+|+.++++++|||+ +|||+..+.|+|++++|||+|||+|.|+|
T Consensus 109 ~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~l~~G~~~~~~a~tEp~~aGsd~~~~~t~A~~~~~g~~lnG~K~~is 188 (428)
T 2wbi_A 109 FAPDVFNCQAPDTGNMEVLHLYGSEEQKKQWLEPLLQGNITSCFCMTEPDVASSDATNIECSIQRDEDSYVINGKKWWSS 188 (428)
T ss_dssp THHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHHTSSEEEEECCCTTSCTTSGGGCCCEEEEETTEEEEEEEEEEEE
T ss_pred chhhhHhhhccchhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEEecCCcCCCCcccceEEEEEeCCEEEEEeEEeccC
Confidence 53 22211112124566788999999999999999999999999999999 99999999999999999999999999999
Q ss_pred CCCC--CCEEEEEEEeCCC-----CCeEEEEEeCCCCCeeeccccccccccccc---ceeEEEcceecCCCCCcCCC-Cc
Q 017183 145 NSTF--ADVLVIFARNTTT-----NQINGYLVKKDAPGLTVTKIENKIGLRIVQ---NGDILLKKVFVPDEDRLPGV-NS 213 (376)
Q Consensus 145 ~~~~--ad~~~v~a~~~~~-----~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~---~~~v~f~~v~Vp~~~~lg~~-~~ 213 (376)
|+.. ||+++|+|+++++ +++++|+||.+.|||++.+.|+++|+++++ +++|.||||+||+++++|.. ++
T Consensus 189 ~a~~~~Ad~~~v~art~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fddv~VP~~~~lg~~g~g 268 (428)
T 2wbi_A 189 GAGNPKCKIAIVLGRTQNTSLSRHKQHSMILVPMNTPGVKIIRPLSVFGYTDNFHGGHFEIHFNQVRVPATNLILGEGRG 268 (428)
T ss_dssp TTTSTTEEEEEEEEECCCTTSCGGGCEEEEEEETTSTTEEEEEECCBTTBCCGGGCCEEEEEEEEEEEEGGGBCSCTTCH
T ss_pred CCCCCcCCEEEEEEEeCCccCCCCCceEEEEEECCCCcEEecCCCCccccCCCCCCCeEEEEeCceEECHHHhcCCccch
Confidence 9988 9999999998643 268899999999999999999999999995 99999999999999999876 56
Q ss_pred HHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-C-
Q 017183 214 FQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEK-G- 291 (376)
Q Consensus 214 ~~~~~~~~~~~rl~~aa~~lG~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~-~- 291 (376)
+......+..+|+.+++.++|+++++++.+++|+++|++||+|++++|.+|++|++|..+++++|++++++++.++. +
T Consensus 269 ~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~g~ 348 (428)
T 2wbi_A 269 FEISQGRLGPGRIHHCMRTVGLAERALQIMCERATQRIAFKKKLYAHEVVAHWIAESRIAIEKIRLLTLKAAHSMDTLGS 348 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 77777888899999999999999999999999999999999999999999999999999999999999999998876 2
Q ss_pred CCChhhhhhHHHHHHHHHHHHHHHHHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhcc
Q 017183 292 AMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTGI 362 (376)
Q Consensus 292 ~~~~~~~~~~K~~~~~~a~~~~~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~ 362 (376)
.+....++++|.++++.+.++++.++|++||.||.++++++|+|||++...+++|++++++..|++.+++.
T Consensus 349 ~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~G~~~~~~~~ia~~~l~~ 419 (428)
T 2wbi_A 349 AGAKKEIAMIKVAAPRAVSKIVDWAIQVCGGAGVSQDYPLANMYAITRVLRLADGPDEVHLSAIATMELRD 419 (428)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSTTSSHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCCCcHHHHHHHHhhcEecCChHHHHHHHHHHHHHHH
Confidence 34456689999999999999999999999999999999999999999999999999999999999999864
No 30
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=100.00 E-value=2.9e-59 Score=447.72 Aligned_cols=350 Identities=14% Similarity=0.095 Sum_probs=317.2
Q ss_pred hhHH-hHHHHhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhhH
Q 017183 2 KQRV-DFCIFFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSL 79 (376)
Q Consensus 2 ~~~~-~f~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~~ 79 (376)
++.+ +|++++.|.+.+.|+++.+|+++|++|++.||+++.+ ++|||.|+++.+.+.++|+++++|+++++.+.+|. +
T Consensus 13 ~~~~~~~~~~~~~~~~~~d~~~~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~ 91 (394)
T 2rfq_A 13 MQRLDALLPTLRERAQETEDLRRIPDDSMKALQETGFFRLLQPEQWGGYQADPVLFYSAVRKIASACGSTGWVSSIIG-V 91 (394)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHTSCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHhHHHHHhcCCCCHHHHHHHHHCCCceecCchhhCCCCCCHHHHHHHHHHHHhhChhHHHHHHHHH-H
Confidence 4555 8888889999999999999999999999999999988 99999999999999999999999999998777775 5
Q ss_pred HHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEEeC
Q 017183 80 AMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 159 (376)
Q Consensus 80 ~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~~~ 159 (376)
+..++..+|+++||++|++ +|+.+++++++ | .|+|++++|||+|||+|.|+||+..||+++|+|+++
T Consensus 92 ~~~~l~~~g~~~q~~~~l~---~g~~~~~~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~ 158 (394)
T 2rfq_A 92 HNWHLALFSQQAQEDVWGN---DTDVRISSSYA-P---------MGAGQVVDGGYTVNGAWAWSSGCDHASWAVLGGPVI 158 (394)
T ss_dssp HHHHHTTSCHHHHHHHHSS---CTTCCEEEECS-C---------SEEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEEE
T ss_pred HHHHHHhCCHHHHHHHhCC---CCCeEEEeccC-C---------CceEEEeCCeEEEeeeEeccCCCcccceEEEeeeec
Confidence 7778889999999999998 79889999987 3 579999999999999999999999999999999983
Q ss_pred -CC--CCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCC--------C-----CcHHHHHHHhhH
Q 017183 160 -TT--NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG--------V-----NSFQDTSKVLAV 223 (376)
Q Consensus 160 -~~--~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~--------~-----~~~~~~~~~~~~ 223 (376)
+. +++++|+||.+ ||++.+.|+++|++++++++|.||||+||++++++. + ++.......+..
T Consensus 159 ~~g~~~~~~~flV~~~--gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~~~g~~~g~~~~~g~~~~~~~~~~ 236 (394)
T 2rfq_A 159 KDGRPVDFVSFLIPRE--DYRIDDVWNVVGLRGTGSNTVVVEDVFVPTHRVLSFKAMSNLTAPGLERNTAPVYKMPWGTI 236 (394)
T ss_dssp ETTEEEEEEEEEEEGG--GCEEECCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHTTCCGGGTTCCCGGGGSCHHHH
T ss_pred CCCCCCceeEEEEEhh--hcEEeCCccccccccCCCCceEEcceEcChHHhcccccccccCCCCcccCCCccccccHHHH
Confidence 22 26899999997 899999999999999999999999999999999964 1 123344455678
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhc---ccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCCC--
Q 017183 224 SRVMVAWQPIGISMGVYDMCHRYLKERK---QFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYE----KGAMT-- 294 (376)
Q Consensus 224 ~rl~~aa~~lG~~~~~l~~~~~~~~~r~---~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~----~~~~~-- 294 (376)
.|+.+++.++|+++++++.+++|+++|+ +||+|++++|.+|++|++|.+++++++++++++++.++ .+...
T Consensus 237 ~r~~~aa~~~G~a~~al~~a~~ya~~R~~~~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~g~~~~~ 316 (394)
T 2rfq_A 237 HPTTISAPIVGMAYGAYDAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEASSDIDAAWRQLSGNVADEYALLVAGEEVPF 316 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCcCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCH
Confidence 8999999999999999999999999999 99999999999999999999999999999999999988 65442
Q ss_pred --hhhhhhHHHHHHHHHHHHHHHHHHHhCCccccCcCcHHHHhhhhcCcccccc-hHHHHHHHHHHHHhcccCCCC
Q 017183 295 --PGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKAFCDIEPIYTYEG-TYDINTLVTGREVTGIASFKP 367 (376)
Q Consensus 295 --~~~~~~~K~~~~~~a~~~~~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g-~~~~~~~~i~~~~l~~~~~~~ 367 (376)
...++++|.++++.+.++++.++|++||.||.++++++|+|||++...+++| ++++++..+++.++++|+..|
T Consensus 317 ~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~g~~~~~~~~~i~~~llg~~~~~~ 392 (394)
T 2rfq_A 317 ELRLRARRDQVRATGRAISSIDKLFESSGATALANGTPLQRFWRDAHAGRVHAANDPERAYVMYGTGEFGLPITDT 392 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTCHHHHHHHHHHHHTTSGGGCHHHHHHHHHHHHTTCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhhcCCcHHHHHHHHHHHHcccccCchhHHHHHHHHHhCCCCCCC
Confidence 2357899999999999999999999999999999999999999999999999 999999999999999886543
No 31
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=100.00 E-value=2.6e-59 Score=448.31 Aligned_cols=352 Identities=17% Similarity=0.169 Sum_probs=310.7
Q ss_pred hhHH-hHHHHhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCC-CCHHHHHHHHHHHHccCCchhHHHHHhhh
Q 017183 2 KQRV-DFCIFFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPG-HSVTGAAIAIAEIARVDASCSTFILVHSS 78 (376)
Q Consensus 2 ~~~~-~f~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g-~~~~~~~~~~~~la~~~~s~~~~~~~~~~ 78 (376)
++.+ +|+++++|.+.+.|+++.+|+++|++|++.||+++.+ ++|||.| .++.+.+.++|+++++|+++++.+.+|..
T Consensus 17 ~~~~r~~~~~~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~eel~~~~~~~~~~~~~~~~ 96 (395)
T 3mxl_A 17 VDLLAGVIPRISAEAADRDRTGTFPVEAFEQFAKLGLMGATVPAELGGLGLTRLYDVATALMRLAEADASTALAWHVQLS 96 (395)
T ss_dssp HHHHTTTHHHHHHHHHHHHHHTCCCHHHHHHHHHHTGGGCSSCTTTTSCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhchHHHhhhCCCCHHHHHHHHHCCCcCcCCChhhCCCCCcCHHHHHHHHHHHHhhCcHHHHHHHHHHH
Confidence 3455 8888899999999999999999999999999999988 9999999 99999999999999999999998888765
Q ss_pred HHHHHH--HhcCCHHHH---HhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEE
Q 017183 79 LAMLTI--ALCGSEEQK---QKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLV 153 (376)
Q Consensus 79 ~~~~~l--~~~g~~~q~---~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~ 153 (376)
.+..++ ..+|+++|| ++|++.+.+|+.++++++|||++|+ .... ++++|||+|||+|.|+||+..||+++
T Consensus 97 ~~~~~~~~~~~g~~~qk~~~~~~l~~~~~g~~~~~~a~tEp~~~~--~~~~---t~~~~g~~lnG~K~~is~a~~Ad~~~ 171 (395)
T 3mxl_A 97 RGLTLTYEWQHGTPPVRAMAERLLRAMAEGEAAVCGALKDAPGVV--TELH---SDGAGGWLLSGRKVLVSMAPIATHFF 171 (395)
T ss_dssp HHHHHHHHHHSSCHHHHHHHHHHHHHHHHTSCCEECCCSBCTTCC--CEEE---ECSSSCEEEEEEEEEETTGGGCSEEC
T ss_pred HHHHHHHHhhcCCHHHHhHHHHHHHHHhcCCcEEEEEecCCCCCC--CceE---EecCCEEEEeeEEEEecCccccCEEE
Confidence 454443 356999999 9999999999999999999998753 2222 23778899999999999999999999
Q ss_pred EEEEeCCC---CCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcC--CC-CcHHHHHHHhhHhHHH
Q 017183 154 IFARNTTT---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP--GV-NSFQDTSKVLAVSRVM 227 (376)
Q Consensus 154 v~a~~~~~---~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg--~~-~~~~~~~~~~~~~rl~ 227 (376)
|+|+++++ +++++|+||.+.|||++.+.|+++|++++++++|+|+||+||+++++| .. .++.........+|+.
T Consensus 172 v~a~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~g~~~~~~~~~~~r~~ 251 (395)
T 3mxl_A 172 VHAQRRDDDGSVFLAVPVVHRDAPGLTVLDNWDGLGMRASGTLEVVFDRCPVRADELLERGPVGARRDAVLAGQTVSSIT 251 (395)
T ss_dssp CCEEEECTTSCEEEECCCEETTCTTEEEECCCCBSSCTTSCCEEEEEEEEEECGGGCCEEEESSCCCTTHHHHHHHHHGG
T ss_pred EEEEeCCCCCCCceEEEEEECCCCceEeCCCchhcCCCCCCcceEEEcceEcCHHHhcCCCCCCccHHHHHhhhHHHHHH
Confidence 99999653 347899999999999999999999999999999999999999999997 33 3443334445568889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCC------h
Q 017183 228 VAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEK------GAMT------P 295 (376)
Q Consensus 228 ~aa~~lG~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~------~~~~------~ 295 (376)
+++.++|+++++++.+++|++ ++|++++|.+|++|++|.++++++|++++++++.++. +.+. .
T Consensus 252 ~aa~~~G~a~~al~~a~~~a~-----~r~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~~~~ 326 (395)
T 3mxl_A 252 MLGIYAGIAQAARDIAVGFCA-----GRGGEPRAGARALVAGLDTRLYALRTTVGAALTNADAASVDLSGDPDERGRRMM 326 (395)
T ss_dssp GHHHHHHHHHHHHHHHHHHHH-----TTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHc-----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCccccchhHH
Confidence 999999999999999999998 4589999999999999999999999999999988775 1111 1
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhCCccccCcCcHHHHhhhhcCcc-cccchHHHHHHHHHHHHhccc
Q 017183 296 GHASLGKSWITARARETVALGRELLGGNGILSDFLVAKAFCDIEPIY-TYEGTYDINTLVTGREVTGIA 363 (376)
Q Consensus 296 ~~~~~~K~~~~~~a~~~~~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~-~~~g~~~~~~~~i~~~~l~~~ 363 (376)
..++++|.++++.+.++++.++|++||.||.++++++|+|||++... +++|++.+++..|++.+||+|
T Consensus 327 ~~~~~ak~~~~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~~~~~g~~~~~~~~ia~~~Lglp 395 (395)
T 3mxl_A 327 TPFQYAKMTVNELAPAVVDDCLSLVGGLAYTAGHPLSRLYRDVRAGGFMQPYSYVDAVDYLSGQALGLD 395 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCGGGGBTTSHHHHHHHHGGGGGGCSSCCHHHHHHHHHHHHSCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHhccCCCcHHHHHHHHHhccccCCCCHHHHHHHHHHHHhCCC
Confidence 34678999999999999999999999999999999999999999999 999999999999999999986
No 32
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=100.00 E-value=9.4e-59 Score=447.69 Aligned_cols=350 Identities=13% Similarity=0.081 Sum_probs=317.1
Q ss_pred hhHH-hHHHHhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhhH
Q 017183 2 KQRV-DFCIFFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSL 79 (376)
Q Consensus 2 ~~~~-~f~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~~ 79 (376)
++.+ +|++++.+.+.+.|+++.+|+++|++|.+.||+++.+ ++|||.|+++.+...++|+++++|+++++.+..|. +
T Consensus 41 ~~~~r~~~~~~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~ 119 (422)
T 2jbr_A 41 LEKIQQILPQIAKNAESAEQLRRVPDENIKLLKEIGLHRAFQPKVYGGLEMSLPDFANCIVTLAGACAGTAWAFSLLC-T 119 (422)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHTSCCHHHHHHHHHTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHhhHHHHHcCCCCHHHHHHHHHCCchhcCCchhcCCCCCCHHHHHHHHHHHHhhCcCHHHHHHHHH-H
Confidence 4556 8888889999999999999999999999999999988 99999999999999999999999999998777664 5
Q ss_pred HHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEEeC
Q 017183 80 AMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 159 (376)
Q Consensus 80 ~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~~~ 159 (376)
+..++..+|+++||++|++. |+.+++++++ | .|+|++++|||+|||+|.|+||+..||+++|+|+++
T Consensus 120 ~~~~l~~~g~~~q~~~~l~~---g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~ 186 (422)
T 2jbr_A 120 HSHQIAMFSKQLQDEIWLKD---PDATASSSIA-P---------FGKVEEVEGGIILNGDYGWSSGCDHAEYAIVGFNRF 186 (422)
T ss_dssp HHHHHTTSCHHHHHHHHTTC---TTCCEEEECS-C---------CSEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEEE
T ss_pred HHHHHHhCCHHHHHHHHccC---CCeEEEeecC-C---------CeeEEEeCCEEEEeeeEeeecCCccccEEEEEEEec
Confidence 77788999999999999985 8888998887 4 479999999999999999999999999999999986
Q ss_pred CC---CCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcCCC---------Cc-----HHHHHHHhh
Q 017183 160 TT---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV---------NS-----FQDTSKVLA 222 (376)
Q Consensus 160 ~~---~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~---------~~-----~~~~~~~~~ 222 (376)
+. +++++|+||.+ ||++.+.|+++|++++++++|.|+||+||+++++|.. .+ +......+.
T Consensus 187 ~~~g~~g~~~flV~~~--gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~~~g~~~g~g~~~~~~~~~~~~~~ 264 (422)
T 2jbr_A 187 DADGNKIYSFGVIPRS--DYEIVDNWYAQAIKSSGSKMLKLVNVFIPEYRISKAKDMMEGKSAGFGLYPDSKIFYTPYRP 264 (422)
T ss_dssp CTTSCEEEEEEEEEGG--GCEEECCCCBSSSGGGCCEEEEEEEEEEEGGGEEEHHHHHHTCSTTTTSCTTCSSSSSCHHH
T ss_pred CCCCCceeEEEEEEcC--ceEEeCCccccCcCCCCCCcEEEeeEEecHHHeecccccccCCCCcccccCCCcccccchHH
Confidence 32 36889999997 8999999999999999999999999999999999652 22 334455677
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHhhc--ccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCCC--
Q 017183 223 VSRVMVAWQPIGISMGVYDMCHRYLKERK--QFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYE----KGAMT-- 294 (376)
Q Consensus 223 ~~rl~~aa~~lG~~~~~l~~~~~~~~~r~--~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~----~~~~~-- 294 (376)
.+|+.+++.++|+++++++.+++|+++|+ +||+|++++|.+|++|++|.++++++|++++++++.++ .+...
T Consensus 265 ~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~g~~~~~ 344 (422)
T 2jbr_A 265 YFASGFSAVSLGIAERMIEAFKEKQRNRVRAYTGANVGLATPALMRIAESTHQVAAARALLEKTWEDHRIHGLNHQYPNK 344 (422)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHHTTCBCTTTCCBCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCH
Confidence 88999999999999999999999999998 99999999999999999999999999999999999988 55442
Q ss_pred --hhhhhhHHHHHHHHHHHHHHHHHHHhCCccccCcCcHHHHhhhhcCcccccchH-HHHHHHHHHHHhcccCCCC
Q 017183 295 --PGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTY-DINTLVTGREVTGIASFKP 367 (376)
Q Consensus 295 --~~~~~~~K~~~~~~a~~~~~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~-~~~~~~i~~~~l~~~~~~~ 367 (376)
...++++|.++++.+.++++.++|++||.||..+++++|+|||++...+++|++ ++++..|++.++++|+..|
T Consensus 345 ~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~~~e~~~~~ia~~~lg~~~~~~ 420 (422)
T 2jbr_A 345 ETLAFWRTNQAYAVKMCIEAVDRLMAAAGATSFMDNSELQRLFRDAHMTGAHAYTDYDVCAQILGRELMGMEPDPT 420 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGGBTTCHHHHHHHHHHHHTSSTTTCHHHHHHHHHHHHTTCCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHhhhcCCcHHHHHHHHHHHhcCCccchhHHHHHHHHHHhCCCCCCC
Confidence 245789999999999999999999999999999999999999999999999999 9999999999999876543
No 33
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=100.00 E-value=1e-58 Score=446.52 Aligned_cols=349 Identities=13% Similarity=0.048 Sum_probs=316.0
Q ss_pred hhHH-hHHHHhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhhH
Q 017183 2 KQRV-DFCIFFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSL 79 (376)
Q Consensus 2 ~~~~-~f~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~~ 79 (376)
++.+ +|++++.|.+.+.|+++.+|+++|++|++.||+++.+ ++|||.|+++.+.+.++|+++++|+++++.+..|. +
T Consensus 26 ~~~~r~~~~~~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~ 104 (414)
T 2or0_A 26 LDRIEVVAEEIRGQAVQSEADCRLTDAAAGLLRDSGAIRLLQPRLYGGYEVHPREFAETVMGVAALDGASGWVTGIVG-V 104 (414)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHTSCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHT-T
T ss_pred HHHHHHHHHHHHHhHHHHHhcCCCCHHHHHHHHHCCCchhcCchhhCCCCCCHHHHHHHHHHHHhhChHHHHHHHHHH-H
Confidence 3455 7888888999999999999999999999999999988 99999999999999999999999999998777775 5
Q ss_pred HHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEEEeC
Q 017183 80 AMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT 159 (376)
Q Consensus 80 ~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a~~~ 159 (376)
+..++..+|+++||++|++ +|+.++++++| | .|+|++++|||+|||+|.|+||+..||+++|+|+++
T Consensus 105 ~~~~l~~~g~~~q~~~~l~---~g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~ 171 (414)
T 2or0_A 105 HPWELAFADPQVQEEIWGE---DNDTWMASPYA-P---------MGVATPVDGGYVLKGRWSFSSGTDHCQWAFLGAMVG 171 (414)
T ss_dssp HHHHHTTSCHHHHHHHHSS---CTTCCEECCCS-C---------CEEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEEC
T ss_pred HHHHHHhCCHHHHHHHHcc---CCCeEEEeccC-C---------CceeEEECCeEEEEeeEeccCCCchhhEEEEEEEec
Confidence 7788899999999999998 79989998887 4 579999999999999999999999999999999986
Q ss_pred CC---C---CeEEEEEeCCCCCeeec-ccccccccccccceeEEEcceecCCCCCcCCC-------------CcHHHHHH
Q 017183 160 TT---N---QINGYLVKKDAPGLTVT-KIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-------------NSFQDTSK 219 (376)
Q Consensus 160 ~~---~---~~~~flV~~~~~Gv~~~-~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-------------~~~~~~~~ 219 (376)
+. + ++++|+||.+ ||++. +.|+++|++++++++|.||||+||++++|+.. .++.....
T Consensus 172 ~~~g~~~~~g~~~flV~~~--gv~v~~~~~~~~G~r~~~~~~v~fd~v~VP~~~~lg~~~~~~g~~~g~~~~~g~~~~~~ 249 (414)
T 2or0_A 172 DGEGGIATPSSLHVILPRT--DYQIVEDTWDVIGLRGTGSKDLIVDGAFVPGYRTLNAAKVMDGRAQKEAGRPEPLFNMP 249 (414)
T ss_dssp C-----CCCSEEEEEEEGG--GCEEETTCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHHSHHHHHHTCSCSGGGSC
T ss_pred CCCCCcccceeEEEEEEhh--hcEEecCCCccccCcccCCCcEEEccEEecHHHeeccccccccCCCccccCCCcccccc
Confidence 31 3 7899999997 89999 99999999999999999999999999999641 12334445
Q ss_pred HhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCCC
Q 017183 220 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQF-GAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYE----KGAMT 294 (376)
Q Consensus 220 ~~~~~rl~~aa~~lG~~~~~l~~~~~~~~~r~~~-g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~----~~~~~ 294 (376)
.+...|+.+++.++|+++++++.+++|+++|++| |+|++++|.+|++|++|.+++++++++++++++.++ .+...
T Consensus 250 ~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~f~G~~i~~~q~vq~~la~~~~~~~aar~l~~~aa~~~~~~~~~g~~~ 329 (414)
T 2or0_A 250 YSCMFPLGITAAVIGITEGALACHIAVQKDRVAITGQKIKEDPYVLSAIGESAAEINASRVSLIETADRFYDKVDAGKEI 329 (414)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTTSCBGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 5678899999999999999999999999999999 999999999999999999999999999999999988 55442
Q ss_pred ----hhhhhhHHHHHHHHHHHHHHHHHHHhCCccccCcCcHHHHhhhhcCcccccc-hHHHHHHHHHHHHhcccCCC
Q 017183 295 ----PGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKAFCDIEPIYTYEG-TYDINTLVTGREVTGIASFK 366 (376)
Q Consensus 295 ----~~~~~~~K~~~~~~a~~~~~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g-~~~~~~~~i~~~~l~~~~~~ 366 (376)
...++++|.++++.+.++++.++|++||.||.++++++|+|||+++..+++| ++++++..+++.++++|+..
T Consensus 330 ~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~t~~~~~~~ia~~~lg~~~~~ 406 (414)
T 2or0_A 330 TFEERAIGRRTQIAAAWRAVRAADEIFARAGGGALHYKTPMQRFWRDAHAGLAHAVHVPGPTNHASALTQLGGEPQG 406 (414)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGGBTTSSHHHHHHHHHHHHTSGGGCCHHHHHHHHHHHTTCCCCG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhChHhhccCCchhHHHHHHHHHHcCCcccchHHHHHHHHHHhCCCCCC
Confidence 2357899999999999999999999999999999999999999999999999 99999999999999998543
No 34
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=100.00 E-value=1.7e-57 Score=441.23 Aligned_cols=354 Identities=19% Similarity=0.220 Sum_probs=307.4
Q ss_pred hhHH-hHHHHhcchhHhhhhhCCCCHHHHHHHHhcCCccCcc-cccCCCC-CCHHHHHHHHHHHHccCCchhHHHHHhhh
Q 017183 2 KQRV-DFCIFFLNLLFQYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPG-HSVTGAAIAIAEIARVDASCSTFILVHSS 78 (376)
Q Consensus 2 ~~~~-~f~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~-~~~GG~g-~~~~~~~~~~~~la~~~~s~~~~~~~~~~ 78 (376)
++.+ +|++++++.+.+.|+++.+|+++|++|++.||+++.+ ++|||.| .++.+++.++|+++++|+++++.+.+|..
T Consensus 28 ~~~~r~~~~~~~~~a~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~gl~~~~~~~~v~eel~~~~~~~~~~~~~~~~ 107 (439)
T 3m9v_A 28 LDRLAAHLPRIRSTAAEHDRDGTFPTDTFDALRKDGLMGATVPAELGGLGVDRLYDVAVALLAVARADASTALALHMQLS 107 (439)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHTCCCHHHHHHHHHTTGGGTTSCGGGTSCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHhcCCCCHHHHHHHHHCCCccCCCChhhCCCCCCCHHHHHHHHHHHHhhChHHHHHHHHHHH
Confidence 3455 7888899999999999999999999999999999988 9999999 89999999999999999999988887765
Q ss_pred HHHHH--HHhcCCHHH---HHhhhHHhhcCcceeEEEeeCCCCCCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEE
Q 017183 79 LAMLT--IALCGSEEQ---KQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLV 153 (376)
Q Consensus 79 ~~~~~--l~~~g~~~q---~~~~l~~~~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~ 153 (376)
.+..+ +..+|+++| |++|++.+.+|+.++++++|||+++ ..... ++++|||+|||+|.|+||+..||+++
T Consensus 108 ~~~~~~~~~~~gt~~q~~~k~~~l~~l~~g~~~~~~a~tEp~~~--~~~~~---t~~~~g~vlnG~K~~~s~a~~Ad~~~ 182 (439)
T 3m9v_A 108 RGLTLGYEWRHGDERARTLAERILRGMVAGDAVVCSGIKDHHTA--VTTLR---PDGAGGWLLSGRKTLVSMAPVGTHFV 182 (439)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHTCCCEEEECEECTTC--CCEEE---ECSSSCEEEEEEEEEETTGGGCSEEE
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhCCCceEEEeecCCCCC--CCcee---eccCCEEEEEeEEEeecCccccCEEE
Confidence 44443 356799999 9999999999999999999999853 22222 23778899999999999999999999
Q ss_pred EEEEeCCC---CCeEEEEEeCCCCCeeecccccccccccccceeEEEcceecCCCCCcC--CC-CcHHHHHHHhhHhHHH
Q 017183 154 IFARNTTT---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLP--GV-NSFQDTSKVLAVSRVM 227 (376)
Q Consensus 154 v~a~~~~~---~~~~~flV~~~~~Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg--~~-~~~~~~~~~~~~~rl~ 227 (376)
|+|+++++ .++++|+||.+.|||++.+.|+++|++++++++|.|+||+||++++|+ .. .++.........+|+.
T Consensus 183 v~art~~~~~~~g~~~flVp~~~pGv~i~~~~~~~G~~~~~~~~v~fddv~VP~~~~lg~~~~g~g~~~~~~~~~~~r~~ 262 (439)
T 3m9v_A 183 INARTDGTDGPPRLASPVVTRDTPGFTVLDNWDGLGMRASGTVDIVFDDCPIPADHVLMRDPVGARNDAVLAGQTVSSVS 262 (439)
T ss_dssp ECEEECC--CCCCEEEEEEETTCTTEEECCCCCCSSCTTSCCEEEEEEEEEECGGGEEECCC--CCCGGGHHHHHHHHGG
T ss_pred EEEEecCCCCCceeEEEEEECCCCCeEECCCcccCCcCCCCceeEEEeeeEcCHHHccCCCCCCchHHHHhhchHHHHHH
Confidence 99999643 458999999999999999999999999999999999999999999997 33 3333333334557888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---C---------CCCh
Q 017183 228 VAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEK---G---------AMTP 295 (376)
Q Consensus 228 ~aa~~lG~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~---~---------~~~~ 295 (376)
+++.++|+++++++.+++|++. +|+.++|.+|++|+++.++++++++++++++..++. . ....
T Consensus 263 ~aa~~~G~a~~al~~a~~~a~~-----r~i~~~~~vq~~la~~~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~ 337 (439)
T 3m9v_A 263 VLGVYVGVAQAAYDTAVAALER-----RPEPPQAAALTLVAEIDSRLYALRATAGSALTAADALSADLSGDMDERGRQMM 337 (439)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHT-----CSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhhhHH
Confidence 9999999999999999999994 588999999999999999999999999988877664 1 0112
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhCCccccCcCcHHHHhhhhcCcc-cccchHHHHHHHHHHHHhcccCC
Q 017183 296 GHASLGKSWITARARETVALGRELLGGNGILSDFLVAKAFCDIEPIY-TYEGTYDINTLVTGREVTGIASF 365 (376)
Q Consensus 296 ~~~~~~K~~~~~~a~~~~~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~-~~~g~~~~~~~~i~~~~l~~~~~ 365 (376)
..++++|.++++.+.++++.++|++||.||.++++++|+|||+++.. +++|++.+++..+++.++|+|..
T Consensus 338 ~~~~~ak~~a~~~a~~v~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~~~~~gt~~~~~~~i~~~~lg~~~~ 408 (439)
T 3m9v_A 338 RHFQCAKLAVNRLAPEIVSDCLSLVGGASYTAGHPLARLLRDVQAGRFMQPYAYVDAVDFLSAQALGIERD 408 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCGGGGSTTSHHHHHHHHTTGGGTSSSCCHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCHHHhcCCChHHHHHHHHHhhhhhCCCchHHHHHHHHHHHhCCchh
Confidence 34677899999999999999999999999999999999999999999 99999999999999999999854
No 35
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=100.00 E-value=4.8e-51 Score=401.92 Aligned_cols=328 Identities=18% Similarity=0.193 Sum_probs=292.2
Q ss_pred CHHHHHHHHhcCCccCcc---cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhhHHHHHHHhcCCHHHHHhhhHHhh
Q 017183 25 PFHVIPKLGALRVAGGTI---KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 101 (376)
Q Consensus 25 ~~~~~~~l~~~Gl~~~~~---~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~ 101 (376)
..+.++.+.+.||+++.+ ++|||.+.. ......++..++.......+|.. +...|..+| ++||++|+|.+.
T Consensus 88 ~~~~~~~l~e~Gl~~l~~~~p~~~Gg~~~~----~~~~~~~~~~~~~~~~p~~~t~~-~~~~L~~~g-~eqk~~~lp~l~ 161 (541)
T 3djl_A 88 WHLLMQALCTNRVHNLAWEEDARSGAFVAR----AARFMLHAQVEAGSLCPITMTFA-ATPLLLQML-PAPFQDWTTPLL 161 (541)
T ss_dssp HHHHHHHHHHTTTTTGGGSTTCCTTHHHHH----HHHHHHHHHHCSTTHHHHHHHHH-HHHHHHHHC-CGGGGGGHHHHT
T ss_pred HHHHHHHHHhCCcccCCCCCCCCCCcHHHH----HHHHHHHHHHHHhhhcHHHHHHH-HHHHHHHcC-HHHHHHHHHHHh
Confidence 367889999999999954 689864333 33334444445555555556663 556778888 999999999999
Q ss_pred cCcc-------------eeEEEeeCCCCCCCcCCCeeEEEEe-CCEEEEeeeeecccCCCCCCEEEEEEEeCCCCCeEEE
Q 017183 102 QLNT-------------IACWALTEPAYGSDASALNTTATKV-EGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGY 167 (376)
Q Consensus 102 ~g~~-------------~~~~a~te~~~g~~~~~~~~~a~~~-~~g~~l~G~k~~~s~~~~ad~~~v~a~~~~~~~~~~f 167 (376)
+|+. ++++++|||++|||+...+|+|+++ +|+|+|||+|+|+| +..||+++|+|+++ +++++|
T Consensus 162 sge~~p~~~~~~~~~g~~~~~a~TEp~~GSDl~~~~T~A~~~~~g~y~LnG~K~f~S-a~~Ad~~lVlArt~--~Gis~f 238 (541)
T 3djl_A 162 SDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFS-VPQSDAHLVLAQTA--GGLSCF 238 (541)
T ss_dssp CSCCCCCSSCGGGSSSCCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEE-CTTSSEEEEEEEET--TEEEEE
T ss_pred CCCcccccccccccccceeEEEeccCCcCCCcccceeEEEEcCCCeEEEEEEEEeec-ccccCEEEEEEEEC--CceEEE
Confidence 9998 7899999999999999999999999 78899999999999 89999999999996 689999
Q ss_pred EEeCCCC-----CeeecccccccccccccceeEEEcceecCCCCCcCCC-CcHHHHHHHhhHhHHHHHHHHHHHHHHHHH
Q 017183 168 LVKKDAP-----GLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIGISMGVYD 241 (376)
Q Consensus 168 lV~~~~~-----Gv~~~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~lg~~-~~~~~~~~~~~~~rl~~aa~~lG~~~~~l~ 241 (376)
+||++.| ||++.+.|+++|+++++++++.|+||+ ++++|++ +++......++.+|+.+++.++|+++++++
T Consensus 239 lVp~~~p~~~~~Gv~i~~~~~~~G~rgt~s~~v~fddv~---~~llG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~ 315 (541)
T 3djl_A 239 FVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAI---GWLLGLEGEGIRLILKMGGMTRFDCALGSHAMMRRAFS 315 (541)
T ss_dssp EEESBCTTSCBCSEEEEEECCCSSCTTSCEEEEEEEEEE---EEEESSTTCHHHHTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCcCCeEEeeccccCCCcCCceeEEEEccce---eeeeecCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988 999999999999999999999999995 7888876 678888899999999999999999999999
Q ss_pred HHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------hhhhhhHHHHHHHHHHHHHHH
Q 017183 242 MCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMT------PGHASLGKSWITARARETVAL 315 (376)
Q Consensus 242 ~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~------~~~~~~~K~~~~~~a~~~~~~ 315 (376)
.+++|+++|++||+|++++|.+|.+|+++.+++++++++++++++.++.+... ...++++|.++++.+.++++.
T Consensus 316 ~a~~ya~~R~~fG~~i~~~p~vq~~La~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~~~~~~~aK~~ase~a~~~~~~ 395 (541)
T 3djl_A 316 LAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDRRADAKEALWARLFTPAAKFVICKRGMPFVAE 395 (541)
T ss_dssp HHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCccCCCchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999886432 234688999999999999999
Q ss_pred HHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhcccC
Q 017183 316 GRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTGIAS 364 (376)
Q Consensus 316 ~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~~ 364 (376)
+++++||.||.++++++|+|||+++..+++|++.+++..++|.+++.|.
T Consensus 396 a~q~~Gg~G~~~e~~l~r~~Rda~~~~i~eGt~ei~~~~i~r~l~~~~~ 444 (541)
T 3djl_A 396 AMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAG 444 (541)
T ss_dssp HHHHHGGGGGSTTSHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHCTT
T ss_pred HHHhhCCeeecCCCcHHHHHHhhhhhheeCCcHHHHHHHHHHHHHhCch
Confidence 9999999999999999999999999999999999999999999987653
No 36
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=100.00 E-value=5.7e-51 Score=411.26 Aligned_cols=334 Identities=25% Similarity=0.297 Sum_probs=294.1
Q ss_pred CCCCHHHHHHHHhcCCccCcccccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhhHHHHHHHhcCCHHHHHhhhHHhh
Q 017183 22 AEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLA 101 (376)
Q Consensus 22 ~~~~~~~~~~l~~~Gl~~~~~~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~ 101 (376)
..++++.|+.|++.|++...+++|| .+..+...+.+++ +.+++ +.+|..++...|..+|+++|+++|++.+.
T Consensus 56 ~~~~~~~~~~l~~~g~l~~~p~e~G---~~~~~~~~v~e~~---~~~~~--~~~~~~l~~~~l~~~Gt~eqk~~~L~~i~ 127 (659)
T 1w07_A 56 LSRKELFKSTLRKCAHAFKRIIELR---LNEEEAGRLRHFI---DQPAY--VDLHWGMFVPAIKGQGTEEQQKKWLSLAN 127 (659)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHTT---CCHHHHHHHHHHH---CCCCH--HHHHHHTHHHHHHHHSCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHhHHHhC---CCchHHHHHHHHh---ccchh--hhhHHhHHHHHHHHcCCHHHHHHHhhHHh
Confidence 3567889999999998886557787 4677777765555 45555 56676567778899999999999999999
Q ss_pred cCcceeEEEeeCCCCCCCcCCCeeEEEEe--CCEEEEe-----eeeecccC-CCCCCEEEEEEEeCCC---CCeEEEEEe
Q 017183 102 QLNTIACWALTEPAYGSDASALNTTATKV--EGGWILE-----GQKRWIGN-STFADVLVIFARNTTT---NQINGYLVK 170 (376)
Q Consensus 102 ~g~~~~~~a~te~~~g~~~~~~~~~a~~~--~~g~~l~-----G~k~~~s~-~~~ad~~~v~a~~~~~---~~~~~flV~ 170 (376)
+|+.++|+++|||++|||+..++|+|+++ +|||+|| |+|.|+|| +..||+++|+|+++++ .++++|+||
T Consensus 128 ~Ge~~~~~a~TEp~~GSd~~~l~TtA~~d~~~~g~vLntP~~~G~K~~is~~a~~Ad~~lV~Ar~~~~~~~~G~~~flVp 207 (659)
T 1w07_A 128 KMQIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTASKWWPGGLGKVSTHAVVYARLITNGKDYGIHGFIVQ 207 (659)
T ss_dssp TTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSGGGSEECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCEEEEEEecCCCCCCCcccceeEEEEcCCCCEEEEcCCCCCeEEEeecCCCCCCCEEEEEEEECCCCCCCCeEEEEEE
Confidence 99999999999999999999999999999 6899999 99999999 8999999999998632 368899999
Q ss_pred C-C------CCCeeecccccccc---cccccceeEEEcceecCCCCCcCC------C-CcH------HHHHHHhhHhHHH
Q 017183 171 K-D------APGLTVTKIENKIG---LRIVQNGDILLKKVFVPDEDRLPG------V-NSF------QDTSKVLAVSRVM 227 (376)
Q Consensus 171 ~-~------~~Gv~~~~~~~~~G---~~~~~~~~v~f~~v~Vp~~~~lg~------~-~~~------~~~~~~~~~~rl~ 227 (376)
. + .|||++.+.|+++| +++++++.+.|+||+||.+++|+. . .++ ......+..+|+.
T Consensus 208 ~r~~~~~~~~pGV~v~~~~~~~G~~~~~g~~~~~v~fd~VrVP~~~lLg~~~~v~~~g~~~~~~~~~~~~~~~l~~~R~~ 287 (659)
T 1w07_A 208 LRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREGEYVPSDVPKQLVYGTMVYVRQT 287 (659)
T ss_dssp CBCTTTCCBCTTEEEEECCCBSSSSGGGGSCCEEEEESSEEEEGGGBCCSSEEECTTCCEEECSSCGGGCTTTTTHHHHH
T ss_pred ccccCCCCCCCCeEEecCccCccccccCCCCceEEEeccEEECHHHhcCCcCccCCCCceecCCccHHHHHHHHHHHHHH
Confidence 5 4 69999999999999 999999999999999999999985 2 221 2345567889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCc-------ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCC
Q 017183 228 VAWQPIGISMGVYDMCHRYLKERKQFGA-------PLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYE-------KGAM 293 (376)
Q Consensus 228 ~aa~~lG~~~~~l~~~~~~~~~r~~~g~-------~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~-------~~~~ 293 (376)
+++.++|+++++++.+++|++.|++||+ ||+++|.+|++++++.+++++++.+++.+++.++ .+..
T Consensus 288 ~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~~e~pi~~~q~vq~rLa~~~a~~~a~~~~~~~aa~~~~~~~~~~~~g~~ 367 (659)
T 1w07_A 288 IVADASNALSRAVCIATRYSAVRRQFGAHNGGIETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTERLAASDF 367 (659)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCBCSCC---CCCCBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCcccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCh
Confidence 9999999999999999999999999998 8999999999999999999999999999888763 3332
Q ss_pred -----ChhhhhhHHHHHHHHHHHHHHHHHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhccc
Q 017183 294 -----TPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTGIA 363 (376)
Q Consensus 294 -----~~~~~~~~K~~~~~~a~~~~~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~ 363 (376)
....++++|.++++.+.++++.++|+|||+||..+++++++|||+++..+++|++++++..+++.+++..
T Consensus 368 ~~~~~~~~~~a~aK~~at~~a~~~~~~a~q~~GG~G~~~~~~l~r~~rda~~~~~~eG~~~v~~~~iar~lL~~~ 442 (659)
T 1w07_A 368 ATLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLWCSGLPELFAVYVPACTYEGDNVVLQLQVARFLMKTV 442 (659)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGBGGGSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCHHHHHHhcceeEEEeCChHHHHHHHHHHHHHHH
Confidence 2356789999999999999999999999999999999999999999999999999999999999998764
No 37
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=100.00 E-value=2.5e-48 Score=391.46 Aligned_cols=315 Identities=22% Similarity=0.284 Sum_probs=272.9
Q ss_pred cccCCCCCCHHHHHHHHHHHHccCCchhHHHHHhhhHHHHHHHhcCCHHHHHhhhHHhhcCcceeEEEeeCCCCCCCcCC
Q 017183 43 KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASA 122 (376)
Q Consensus 43 ~~~GG~g~~~~~~~~~~~~la~~~~s~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~te~~~g~~~~~ 122 (376)
++|||.+ ..+.. +++++...+ ++..+.+|..++...|..+|+++|+++|++.+.+|+.++|+++|||++|||+.+
T Consensus 75 ~~~~~~~--~~~~~-~~~~~~~~~--~~~~~~~h~~l~~~~i~~~Gt~eq~~~~L~~i~~Ge~~g~~a~TE~g~GSd~~~ 149 (661)
T 2ddh_A 75 REYGISD--PEEIM-WFKNSVHRG--HPEPLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRG 149 (661)
T ss_dssp HHTTCCC--HHHHH-HHHHHHHTT--CCCTTHHHHHTHHHHHC-CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGG
T ss_pred HHcCCCC--chHHH-HHHHHhccc--hhhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEeeccCCcCcCccc
Confidence 6788876 44433 366666543 244456676567889999999999999999999999999999999999999999
Q ss_pred CeeEEEEe--CCEEEEe-----eeeecccC-CCCCCEEEEEEEeCCC---CCeEEEEEeC-C------CCCeeecccccc
Q 017183 123 LNTTATKV--EGGWILE-----GQKRWIGN-STFADVLVIFARNTTT---NQINGYLVKK-D------APGLTVTKIENK 184 (376)
Q Consensus 123 ~~~~a~~~--~~g~~l~-----G~k~~~s~-~~~ad~~~v~a~~~~~---~~~~~flV~~-~------~~Gv~~~~~~~~ 184 (376)
++|+|+++ +|||+|| |+|+|+|| +..||+++|+|++..+ .++++|+||. + .|||++.+.|++
T Consensus 150 l~TtA~~d~~~~~~vLntP~~~G~K~wis~~a~~Ad~~vV~Ar~~~~~~~~G~~~FlVp~rd~~~~~~~pGV~v~~~~~k 229 (661)
T 2ddh_A 150 LETTATYDPKTQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQLITQGECYGLHAFVVPIREIGTHKPLPGITVGDIGPK 229 (661)
T ss_dssp CCCEEEEETTTTEEEEECCSSTTSEECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCC
T ss_pred ceeEEEEcCCCCeEEEcCCCCCeEEEecCCCcccCCEEEEEEEEccCCCCCceEEEEEecccccCCCCCCCeEEecCccc
Confidence 99999999 7899999 99999999 8899999999998632 3689999995 4 799999999999
Q ss_pred cccccccceeEEEcceecCCCCCcCCC-----Cc-------HHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017183 185 IGLRIVQNGDILLKKVFVPDEDRLPGV-----NS-------FQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQ 252 (376)
Q Consensus 185 ~G~~~~~~~~v~f~~v~Vp~~~~lg~~-----~~-------~~~~~~~~~~~rl~~aa~~lG~~~~~l~~~~~~~~~r~~ 252 (376)
+|+++++++.+.|+||+||.+++|+.. ++ +......+..+|+.+++.++|+++++++.+++|++.|++
T Consensus 230 ~Gl~g~~~~~v~Fd~VrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~~~l~~~R~~iaa~~~G~a~~al~~a~~ya~~R~q 309 (661)
T 2ddh_A 230 FGYEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVRRQ 309 (661)
T ss_dssp SSCTTCCCEEEEESSEEEEGGGBCCSSCEECTTCCEECCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBC
T ss_pred ccCCCCcceEEEeccEEECHHHhcCcccccCCCCceeccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcc
Confidence 999999999999999999999999863 23 455666778899999999999999999999999999999
Q ss_pred cCc-------ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------CCC-----ChhhhhhHHHHHHHHHHHHH
Q 017183 253 FGA-------PLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEK-------GAM-----TPGHASLGKSWITARARETV 313 (376)
Q Consensus 253 ~g~-------~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~-------~~~-----~~~~~~~~K~~~~~~a~~~~ 313 (376)
||. ||.++|.+|.+|+++.+++++++.+++.+++.++. +.. ....++++|.++++.+.+++
T Consensus 310 fg~~~~~~e~~i~~~q~vq~rLa~~~a~~~aar~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~aa~aK~~at~~a~~~~ 389 (661)
T 2ddh_A 310 SEIKQSEPEPQILDFQTQQYKLFPLLATAYAFHFVGRYMKETYLRINESIGQGDLSELPELHALTAGLKAFTTWTANAGI 389 (661)
T ss_dssp SCSSTTSCCCBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 998 89999999999999999999999999999988863 322 23457899999999999999
Q ss_pred HHHHHHhCCccccCcCcHHHHhhhhcCcccccchHHHHHHHHHHHHhcc
Q 017183 314 ALGRELLGGNGILSDFLVAKAFCDIEPIYTYEGTYDINTLVTGREVTGI 362 (376)
Q Consensus 314 ~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~ 362 (376)
+.|+++|||+||..+++++++|||+++..+++|++.+++..+++.+++.
T Consensus 390 ~~a~q~~GG~G~~~~~~l~r~~rda~~~~~~eG~~~vl~~~iar~lL~~ 438 (661)
T 2ddh_A 390 EECRMACGGHGYSHSSGIPNIYVTFTPACTFEGENTVMMLQTARFLMKI 438 (661)
T ss_dssp HHHHHHTTHHHHSGGGSHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcccccccCcHHHHHHhcceeeEecCchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999875
No 38
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=6.6e-38 Score=304.96 Aligned_cols=249 Identities=17% Similarity=0.143 Sum_probs=202.0
Q ss_pred HHHHhcCC--HHHHHhhhHHhhcCcceeEEEeeCCCCC--------CCc-CCCeeEEEEeCCEEEEeeeeecccCCCCCC
Q 017183 82 LTIALCGS--EEQKQKYLPSLAQLNTIACWALTEPAYG--------SDA-SALNTTATKVEGGWILEGQKRWIGNSTFAD 150 (376)
Q Consensus 82 ~~l~~~g~--~~q~~~~l~~~~~g~~~~~~a~te~~~g--------~~~-~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad 150 (376)
..+..+|+ ++||++||+.+++|++++++++|||..| ||+ .... ++++++|||+|||.|.|+||+..||
T Consensus 118 ~~~~~~Gt~~~eqk~~~L~~l~~Ge~~~a~a~TEP~~~rs~~~~~gSD~~~~~~-~a~r~gdg~vlnG~K~~iT~a~~Ad 196 (490)
T 1u8v_A 118 EIDQKYGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLR-IVEKREDGIVVRGAKAHQTGSINSH 196 (490)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSCE-EEEECSSEEEEEEEECSCTTCTTCS
T ss_pred hHHHHhCCCHHHHHHHHHHHHHhCCceeeeeeeCCCCCCcccccccCCcccceE-EEEEECCEEEEEeEEEEeeCCcccC
Confidence 34568999 9999999999999999999999999864 565 3333 8999999999999999999999999
Q ss_pred EEEEEEEeCC----CCCeEEEEEeCCCCCeeec---ccccc----------ccc-cc-ccceeEEEcceecCCCCCc--C
Q 017183 151 VLVIFARNTT----TNQINGYLVKKDAPGLTVT---KIENK----------IGL-RI-VQNGDILLKKVFVPDEDRL--P 209 (376)
Q Consensus 151 ~~~v~a~~~~----~~~~~~flV~~~~~Gv~~~---~~~~~----------~G~-~~-~~~~~v~f~~v~Vp~~~~l--g 209 (376)
+++|+++++. .+++++|+||.+.|||++. +.+.+ +|+ |. .+++.|.||||+||++++| |
T Consensus 197 ~~iV~art~~~~~~~~~~s~flVp~d~pGv~v~~~r~~~~~~~~~~~~d~~lg~~r~~~~~~~v~FddV~VP~e~vl~~g 276 (490)
T 1u8v_A 197 EHIIMPTIAMTEADKDYAVSFACPSDADGLFMIYGRQSCDTRKMEEGADIDLGNKQFGGQEALVVFDNVFIPNDRIFLCQ 276 (490)
T ss_dssp EEEECCSSCCCGGGGGGCEEEEEETTCTTEEEEECCCTTGGGGGSTTCCGGGSSSSCCCCCEEEEEEEEEEEGGGEEEES
T ss_pred EEEEEEecCCCCCCCCeEEEEEEECCCCCEEEEecccccccccccccccCCccccccCCceEEEEECceEeCHHHccCCC
Confidence 9999999852 1347899999999999994 45544 566 64 6788999999999999998 5
Q ss_pred CC-CcHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017183 210 GV-NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLY 288 (376)
Q Consensus 210 ~~-~~~~~~~~~~~~~rl~~aa~~lG~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~ 288 (376)
.. .++......+...|+.++++.+|.+..++..+...... + +++++|.+|++|++|.++++++|++++++++..
T Consensus 277 ~~~~g~~~~~~~~~~~r~~~~a~~~~~~~~~lG~a~~~~~~---~--gi~~~q~vq~~laem~~~leaar~l~~~aa~~~ 351 (490)
T 1u8v_A 277 EYDFAGMMVERFAGYHRQSYGGCKVGVGDVVIGAAALAADY---N--GAQKASHVKDKLIEMTHLNETLYCCGIACSAEG 351 (490)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H--TCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---c--CchhcHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 54 34555566667778777776666666666555544332 2 389999999999999999999999999999987
Q ss_pred Hc---CC--CChhhhhhHHHHHHHHHHHHHHHHHHHhCCccccCcCcHHHHhhhh
Q 017183 289 EK---GA--MTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKAFCDI 338 (376)
Q Consensus 289 ~~---~~--~~~~~~~~~K~~~~~~a~~~~~~~~~~~Gg~g~~~~~~~~r~~rd~ 338 (376)
+. +. +....++++|.++++.+.++++.++|++||.++. .|++++|||.
T Consensus 352 d~~~~g~~~~~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~--~p~er~~rd~ 404 (490)
T 1u8v_A 352 YPTAAGNYQIDLLLANVCKQNITRFPYEIVRLAEDIAGGLMVT--MPSEADFKSE 404 (490)
T ss_dssp EECTTSCEECCHHHHHHHHHHHTTHHHHHHHHHHHHHCTHHHH--CCCHHHHTCC
T ss_pred cccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhc--ChHHHHHhCc
Confidence 64 22 3345689999999999999999999999999997 5666666665
No 39
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=100.00 E-value=3.2e-37 Score=299.71 Aligned_cols=263 Identities=14% Similarity=0.095 Sum_probs=216.9
Q ss_pred CHHHHHhhhHHhhcCcceeEEEeeCCCCC--------CCcCCCeeEEE-EeCCEEEEeeeeecccCCCCCCEEEEEEEeC
Q 017183 89 SEEQKQKYLPSLAQLNTIACWALTEPAYG--------SDASALNTTAT-KVEGGWILEGQKRWIGNSTFADVLVIFARNT 159 (376)
Q Consensus 89 ~~~q~~~~l~~~~~g~~~~~~a~te~~~g--------~~~~~~~~~a~-~~~~g~~l~G~k~~~s~~~~ad~~~v~a~~~ 159 (376)
.++||++||+.+++|++++++++|||..| +|+. ..++++ +++|||+|||.|.|+|| ..||+++|+|+++
T Consensus 122 ~~eqk~~~L~~l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~-~~~~~~~~~gdg~VlnG~K~~iT~-~~Ad~~iV~art~ 199 (481)
T 2yyk_A 122 FAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPY-IPVGVVKQTEKGIVVRGARMTATF-PLADEVLIFPSIL 199 (481)
T ss_dssp GHHHHHHHHHHHHHHTCCEEEEECCCCCCTTC----CCCSC-SBCEEEEECSSEEEEEEEEEEEEC-CCSSEEEECCCSC
T ss_pred HHHHHHHHHHHHHcCCeEEEEeeECCCCCCCCCccccCCcc-cceEEEEEECCEEEEEeEEEEecc-ccccEEEEEEecC
Confidence 47999999999999999999999999976 5654 556665 78999999999999999 9999999999985
Q ss_pred C--C--CCeEEEEEeCCCCCeeec--ccccc--------ccccc-ccceeEEEcceecCCCCCc--CCCC-cHHHH--HH
Q 017183 160 T--T--NQINGYLVKKDAPGLTVT--KIENK--------IGLRI-VQNGDILLKKVFVPDEDRL--PGVN-SFQDT--SK 219 (376)
Q Consensus 160 ~--~--~~~~~flV~~~~~Gv~~~--~~~~~--------~G~~~-~~~~~v~f~~v~Vp~~~~l--g~~~-~~~~~--~~ 219 (376)
. . +++++|+||.+.|||++. +.+.. +|.+. .+++.|.||||+||++++| |+.. ++... ..
T Consensus 200 ~~~~~~~~~s~flVp~dtpGv~v~~r~~~~~~~s~~d~~lg~r~~~~~~~v~FddV~VP~e~vl~~G~~~~g~~~~~~~~ 279 (481)
T 2yyk_A 200 LQAGSEKYALAFALPTSTPGLHFVCREALVGGDSPFDHPLSSRVEEMDCLVIFDDVLVPWERVFILGNVELCNNAYGATG 279 (481)
T ss_dssp CCTTCGGGCEEEEEETTCTTEEEEECCCCCCCSCTTTCTTTTTCCCCEEEEEEEEEEEEGGGEEEESCHHHHHHHHHHHT
T ss_pred CCCCCCCeEEEEEEECCCCCEEEEeccccccCCccccccccccCCCCeEEEEEccEEECHHHccCCCCccHHHHHHHHhh
Confidence 2 1 348899999999999994 44432 46664 7789999999999999998 4432 23223 45
Q ss_pred HhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CC--CC
Q 017183 220 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEK---GA--MT 294 (376)
Q Consensus 220 ~~~~~rl~~aa~~lG~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~---~~--~~ 294 (376)
.+..+|+..++..+|.++.++..+..++.. + +++++|.+|++|++|.++++++|++++++++..+. +. +.
T Consensus 280 ~l~~~r~~~~~~~~g~a~~~lg~a~~~~~~---~--gi~~~q~vq~~laem~~~leaar~l~~~aa~~~d~~~~G~~~~~ 354 (481)
T 2yyk_A 280 ALNHMAHQVVALKTAKTEAFLGVAALMAEG---I--GADVYGHVQEKIAEIIVYLEAMRAFWTRAEEEAKENAYGLLVPD 354 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---T--TGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTSCEECC
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHh---c--ChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCcCcc
Confidence 677889999999999999999999888775 3 38999999999999999999999999999998864 32 33
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhCCccccCcCcHHHHhhhhcCcc------cccchHHHHHHHHHHHHhc
Q 017183 295 PGHASLGKSWITARARETVALGRELLGGNGILSDFLVAKAFCDIEPIY------TYEGTYDINTLVTGREVTG 361 (376)
Q Consensus 295 ~~~~~~~K~~~~~~a~~~~~~~~~~~Gg~g~~~~~~~~r~~rd~~~~~------~~~g~~~~~~~~i~~~~l~ 361 (376)
...++++|.++++.+.++++.++|++||.++. .|++++| |..... ...|.+.+.+..|+|.+..
T Consensus 355 ~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~--~p~e~~~-~~~i~~~l~~~l~~~g~~~~~r~~i~rl~~~ 424 (481)
T 2yyk_A 355 RGALDGARNLYPRLYPRIREILEQIGASGLIT--LPSEKDF-KGPLGPFLEKFLQGAALEAKERVALFRLAWD 424 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSC--CCCHHHH-HSTTHHHHHHHSCBTTBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccccc--CccHHHh-ChhhhHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999998877 7888888 885433 2237788888888876543
No 40
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=100.00 E-value=5.3e-32 Score=262.79 Aligned_cols=234 Identities=13% Similarity=0.109 Sum_probs=180.9
Q ss_pred cCC--HHHHHhhhHHhhcCcceeEEEeeCCCC--------CCCcCCCeeEEEEeCCEEEEeeeeecccCCCCCCEEEEEE
Q 017183 87 CGS--EEQKQKYLPSLAQLNTIACWALTEPAY--------GSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA 156 (376)
Q Consensus 87 ~g~--~~q~~~~l~~~~~g~~~~~~a~te~~~--------g~~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~~v~a 156 (376)
+|+ .+|+++||+.+.+|++++++|+|||.. |||+ ...+ ..+++|||+|||.|.|+||+..||+++|++
T Consensus 127 ~~~~~~eq~~~~L~~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~-~~~~-~~~~gdg~VlnG~K~~iT~a~~Ad~~lV~a 204 (515)
T 3hwc_A 127 EGRNLTQNIHNFLKLLREKDLNCPLNFVDPQTDRSSDAAQARSP-NLRI-VEKTDDGIIVNGVKAVGTGIAFGDYMHIGC 204 (515)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCCCCEECCCCCCCCCSCTTTSCCS-BCEE-EEECSSEEEEEEEEEEEESGGGCSEEEECC
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEEEEeeCCCCCcccccccCCCc-ceEE-EEEECCEEEEEEEEEEECCccccCEEEEEE
Confidence 554 478899999999999999999999986 4676 4433 345688999999999999999999999999
Q ss_pred Ee-CCC--CCeEEEEEeCCCCCeeeccccccccc-----c-----cccceeEEEcceecCCCCCc--CCC-CcHHHHHHH
Q 017183 157 RN-TTT--NQINGYLVKKDAPGLTVTKIENKIGL-----R-----IVQNGDILLKKVFVPDEDRL--PGV-NSFQDTSKV 220 (376)
Q Consensus 157 ~~-~~~--~~~~~flV~~~~~Gv~~~~~~~~~G~-----~-----~~~~~~v~f~~v~Vp~~~~l--g~~-~~~~~~~~~ 220 (376)
++ ++. +.+++|+||.+.|||++...|...|. + +..++.|.||||+||++++| |+. .++......
T Consensus 205 ~t~~~~~~~~~s~FlVp~d~pGv~v~~~~~~~G~~~~d~~ls~~~~~~~a~v~FddV~VP~e~vl~~Ge~g~g~~~~~~~ 284 (515)
T 3hwc_A 205 LYRPGIPGEQVIFAAIPTNTPGVTVFCRESTVKNDPAEHPLASQGDELDSTTVFDNVFIPWEQVFHIGNPEHAKLYPQRI 284 (515)
T ss_dssp CCCTTCCGGGCEEEEEETTCTTEEEEECCCCCCSCTTTCTTTTSCCCCEEEEEEEEEEEEGGGEEEESCTTGGGTHHHHH
T ss_pred EecCCCCCCeEEEEEEECCCCCeEEeecccccCccccccccccccCCceEEEEECceEECHHHccCCCCccHHHHHHHHH
Confidence 98 322 23899999999999999877766663 2 23488999999999999999 665 344444333
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CC--CCh
Q 017183 221 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEK---GA--MTP 295 (376)
Q Consensus 221 ~~~~rl~~aa~~lG~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~---~~--~~~ 295 (376)
+...+.......+|.+..++..+..++.. + +|.++|.||++|++|.+.++++|++++++++..+. +. +..
T Consensus 285 ~~~~~r~~~~~~~~~a~~~lG~A~~~~e~---~--gI~~fQ~Vq~kLAem~~~lEaaR~l~~~Aa~~~d~~~~G~~~p~~ 359 (515)
T 3hwc_A 285 FDWVHYHILIRQVLRAELIVGLAILITEH---I--GTSKLPTVSARVAKLVAFHLAMQAHLIASEETGFHTKGGRYKPNP 359 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H--TCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---c--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCH
Confidence 33332111233344455555444444332 2 38999999999999999999999999999988765 32 445
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhCCccccC
Q 017183 296 GHASLGKSWITARARETVALGRELLGGNGILS 327 (376)
Q Consensus 296 ~~~~~~K~~~~~~a~~~~~~~~~~~Gg~g~~~ 327 (376)
..++++|.++++.+.++++.++|++||.+++.
T Consensus 360 ~~as~AK~~ase~~~rv~~~a~qi~GG~~i~~ 391 (515)
T 3hwc_A 360 LIYDFGRAHFLQNQMSVMYELLDLAGRSSLMI 391 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGGTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeC
Confidence 66899999999999999999999999999974
No 41
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=99.95 E-value=1.4e-26 Score=225.11 Aligned_cols=242 Identities=13% Similarity=0.087 Sum_probs=189.5
Q ss_pred HHHHhhhHHhhcCcceeEEEeeCCCCC-----CCcCCCeeEEE-EeCCEEEEeeeeecccCCCCCCEEEEEEEeCCC---
Q 017183 91 EQKQKYLPSLAQLNTIACWALTEPAYG-----SDASALNTTAT-KVEGGWILEGQKRWIGNSTFADVLVIFARNTTT--- 161 (376)
Q Consensus 91 ~q~~~~l~~~~~g~~~~~~a~te~~~g-----~~~~~~~~~a~-~~~~g~~l~G~k~~~s~~~~ad~~~v~a~~~~~--- 161 (376)
+....|+..+.++++..+.++++|... +...++..+.+ +++|||+|||.|.|+||+..||+++|++++.+.
T Consensus 134 ~n~~~y~~~~~~~DL~~~~a~~dPk~dRs~~~~~q~d~~l~Vve~~~dGiVVnGaK~~~T~a~~Ad~i~V~a~t~~~~~~ 213 (517)
T 4g5e_A 134 KNIVDFVNFAKKHDLNCAPQFVDPQMDRSNPDAQQRSPGLRVIEKNDKGIVVSGVKAIGTGVAFADWIHIGVFFRPGIPG 213 (517)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCCCC-----------CBCEEEEECSSEEEEEEEEEEEESGGGCSEEEECCCCCTTCCG
T ss_pred HHHHHHHHHHHhcCceeeeeeeCCCCCCCCCchhcCCCceEEEEEcCCeEEEeeEehhhcCccccCEEEEEeecCCCCCc
Confidence 455789999999999999999999632 11123334554 578899999999999999999999999988533
Q ss_pred CCeEEEEEeCCCCCeeecccccccccccc----------cceeEEEcceecCCCCCc--CCCC-cHHHHHHHhhHhHHHH
Q 017183 162 NQINGYLVKKDAPGLTVTKIENKIGLRIV----------QNGDILLKKVFVPDEDRL--PGVN-SFQDTSKVLAVSRVMV 228 (376)
Q Consensus 162 ~~~~~flV~~~~~Gv~~~~~~~~~G~~~~----------~~~~v~f~~v~Vp~~~~l--g~~~-~~~~~~~~~~~~rl~~ 228 (376)
++.+.|+||.+.|||++.......+.+.. .++.|.||||+||+++++ |+.. +.......+...+...
T Consensus 214 d~~~~F~VP~dtPGv~~i~r~~~~~~~~~d~pl~~r~~e~da~vvFDdV~VP~e~Vf~~Ge~~~~~~~~~~~~~~~~~~~ 293 (517)
T 4g5e_A 214 DQIIFAATPVNTPGVTIVCRESVVKEDPIEHPLASQGDELDGMTVFDNVFIPWSHVFHLGNPEHAKLYPQRVFDWLHYHA 293 (517)
T ss_dssp GGCEEEEEETTCTTEEEEECCCCCCSCTTTCTTGGGCCCCEEEEEEEEEEEEGGGEEEESCTTHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEecCCCCeEEEecccccCCCccccccccccCCcceEEEecceeccHHHccccCChhHHHHHHHHHHHHHHHHH
Confidence 45788999999999998544444333322 347899999999999987 5543 4455666777888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCChhhhhhHHH
Q 017183 229 AWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKG-----AMTPGHASLGKS 303 (376)
Q Consensus 229 aa~~lG~~~~~l~~~~~~~~~r~~~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~-----~~~~~~~~~~K~ 303 (376)
++..+|.++.++..+..+++.. | +.++|+||++|++|...+++++++++.++...... .++...++++|.
T Consensus 294 ~~~~~~~~~~~~g~a~~~ae~~---G--i~~fq~Vq~kLaEm~~~~E~~ral~~aaa~~a~~~~~G~~~P~~~~a~~aK~ 368 (517)
T 4g5e_A 294 LIRQSVRAELMAGLAILITEHI---G--TNKIPAVQTRVAKLIGFHQAMLAHIVASEELGFHTPGGAYKPNILIYDFGRA 368 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---T--CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh---C--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcCcCHHHHHHHHH
Confidence 8888888998998888888654 2 78999999999999999999999999887643332 245567899999
Q ss_pred HHHHHHHHHHHHHHHHhCCccccCcCcHHHHhhhhc
Q 017183 304 WITARARETVALGRELLGGNGILSDFLVAKAFCDIE 339 (376)
Q Consensus 304 ~~~~~a~~~~~~~~~~~Gg~g~~~~~~~~r~~rd~~ 339 (376)
++++...+++..++|++||.|++ .|-++.|+|..
T Consensus 369 ~a~~~~~rv~~eaiqi~GG~g~~--~Pse~d~~~~~ 402 (517)
T 4g5e_A 369 LYLENFSQMIYELVDLSGRSALI--FASEDQWNDEA 402 (517)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTTC--CCCHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHhCCcccc--CCCHHHhcChh
Confidence 99999999999999999999998 34455555543
No 42
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=94.72 E-value=0.24 Score=48.96 Aligned_cols=110 Identities=12% Similarity=0.046 Sum_probs=86.9
Q ss_pred cCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCC-hhhhhhHHHHHHHHHHHHHHHHHHHhCCccccCcCc
Q 017183 253 FGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEK-GAMT-PGHASLGKSWITARARETVALGRELLGGNGILSDFL 330 (376)
Q Consensus 253 ~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~-~~~~-~~~~~~~K~~~~~~a~~~~~~~~~~~Gg~g~~~~~~ 330 (376)
+|+.+.+.|.+..+++++.++++++.+.+.++...++. +.+. .....++++|+.+...++-..+.++. .++.++..
T Consensus 482 ~~~~~~~~q~~l~~~ad~~~~~y~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 559 (597)
T 3owa_A 482 YGKALDKEQEILVNIADIVSNLYAMESAVLRTEKAIKTTGLEKNKQKVLYTEVFCQEAFNEIEAHAKETL--IAVENGDM 559 (597)
T ss_dssp HGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHCCHHH
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhccchH
Confidence 57889999999999999999999999999999998886 6544 45678999999999999999998888 66666666
Q ss_pred HHHHhhhhcCcccccchH-HHHHHHHHHHHhcccC
Q 017183 331 VAKAFCDIEPIYTYEGTY-DINTLVTGREVTGIAS 364 (376)
Q Consensus 331 ~~r~~rd~~~~~~~~g~~-~~~~~~i~~~~l~~~~ 364 (376)
+..+...++-+..+...+ .-.+..|++.++....
T Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 594 (597)
T 3owa_A 560 LRMMLSSLRKLTRHTPLNVIPKKREIAAKILEDER 594 (597)
T ss_dssp HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHccC
Confidence 666666665555444444 5667889988875544
No 43
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=84.39 E-value=18 Score=35.62 Aligned_cols=97 Identities=14% Similarity=0.077 Sum_probs=73.1
Q ss_pred cCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCh-hhhhhHHHHHHHHHHHHHHHHHHHhCCccccCcCcH
Q 017183 253 FGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTP-GHASLGKSWITARARETVALGRELLGGNGILSDFLV 331 (376)
Q Consensus 253 ~g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~K~~~~~~a~~~~~~~~~~~Gg~g~~~~~~~ 331 (376)
.|..+.+.+.+..+|+++...+..+.+.+.++.+.++.+.+.. ....+++.++.+...++-..+.++..+.
T Consensus 506 ~~~~~~~~~~~~~rl~d~~~~~y~~~~~l~r~~~~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-------- 577 (607)
T 2uxw_A 506 HKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEKMLCDTWCIEAAARIREGMAALQSDP-------- 577 (607)
T ss_dssp HGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCT--------
T ss_pred hCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------
Confidence 4678888899999999999999999999999887777775543 3478899999998888888887733220
Q ss_pred HHHhhhhcCcccccchHHHHHHHHHHHHhcccCCCCcc
Q 017183 332 AKAFCDIEPIYTYEGTYDINTLVTGREVTGIASFKPVA 369 (376)
Q Consensus 332 ~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~~~~~~~ 369 (376)
...+.+-.+..|++.++....+...+
T Consensus 578 ------------~~~~~~~~~~~ia~~~~~~~~y~~~~ 603 (607)
T 2uxw_A 578 ------------WQQELYRNFKSISKALVERGGVVTSN 603 (607)
T ss_dssp ------------THHHHHHHHHHHHHHHHHHTSCCSCC
T ss_pred ------------CCCChHHHHHHHHHHHHHcCCEeccC
Confidence 11245667888899988776664443
No 44
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=72.48 E-value=71 Score=31.02 Aligned_cols=104 Identities=12% Similarity=0.042 Sum_probs=72.5
Q ss_pred CcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhhhhHHHHHHHHHHHHHHHHHHHhCCccccCcCcHHH
Q 017183 254 GAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGKSWITARARETVALGRELLGGNGILSDFLVAK 333 (376)
Q Consensus 254 g~~i~~~~~v~~~la~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~a~~~~~~~~~~~Gg~g~~~~~~~~r 333 (376)
+..+.+.|.+..+++++.+.+..+++.+.++.+. .+. ...+++.++.+...++...+.+++ .++.++.+...
T Consensus 469 ~~~l~~~q~~l~~lad~~~~~~~~~~~l~r~~~~--~~~----~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 540 (577)
T 2z1q_A 469 GQGVEEEQEVLGAVADILIDAYAAESALLRARRL--GGL----APVLARIYLAQALDRAQAGALSVL--PRLVEGDEARV 540 (577)
T ss_dssp GGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHH--CTT----HHHHHHHHHHHHHHHHHHHHHHHG--GGTCCTTTTHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCc----HHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCCchhH
Confidence 5566677889999999999999999998887765 222 678899999999999888877766 33444433322
Q ss_pred HhhhhcC-cccccchHHHHHHHHHHHHhcccCC
Q 017183 334 AFCDIEP-IYTYEGTYDINTLVTGREVTGIASF 365 (376)
Q Consensus 334 ~~rd~~~-~~~~~g~~~~~~~~i~~~~l~~~~~ 365 (376)
+...++. ......+++-++..|++.++....+
T Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~y 573 (577)
T 2z1q_A 541 VYSAARRLTKREPGDLVALRRQAAEAVLEAGGY 573 (577)
T ss_dssp HHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHhcccCCCChHHHHHHHHHHHHhcCCc
Confidence 2222221 2344456788899999999865443
Done!