Query 017184
Match_columns 375
No_of_seqs 235 out of 1515
Neff 5.5
Searched_HMMs 46136
Date Fri Mar 29 06:20:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017184.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017184hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02616 tetrahydrofolate dehy 100.0 1E-104 3E-109 785.9 34.6 363 5-375 2-364 (364)
2 PLN02897 tetrahydrofolate dehy 100.0 2E-100 5E-105 752.3 33.4 344 5-373 2-345 (345)
3 COG0190 FolD 5,10-methylene-te 100.0 9.8E-93 2.1E-97 680.8 31.9 282 85-374 1-282 (283)
4 PRK14171 bifunctional 5,10-met 100.0 1.1E-91 2.4E-96 679.2 32.9 282 84-372 2-283 (288)
5 PRK14170 bifunctional 5,10-met 100.0 1.4E-91 3E-96 677.3 32.4 282 84-374 2-283 (284)
6 PRK14185 bifunctional 5,10-met 100.0 1.8E-91 3.9E-96 679.1 32.9 285 85-371 2-290 (293)
7 PLN02516 methylenetetrahydrofo 100.0 3E-91 6.6E-96 679.2 33.9 290 84-373 9-298 (299)
8 PRK14168 bifunctional 5,10-met 100.0 3E-91 6.5E-96 679.1 33.0 293 82-374 1-297 (297)
9 PRK14169 bifunctional 5,10-met 100.0 6.8E-91 1.5E-95 672.3 32.5 280 84-372 1-280 (282)
10 PRK14187 bifunctional 5,10-met 100.0 8.5E-91 1.8E-95 674.7 33.0 286 84-372 2-287 (294)
11 PRK14166 bifunctional 5,10-met 100.0 9.5E-91 2.1E-95 671.3 32.7 280 85-372 2-281 (282)
12 PRK14182 bifunctional 5,10-met 100.0 9.9E-91 2.2E-95 670.8 32.4 279 85-372 2-281 (282)
13 PRK14167 bifunctional 5,10-met 100.0 1.2E-90 2.7E-95 674.7 32.8 287 84-374 2-292 (297)
14 PRK14190 bifunctional 5,10-met 100.0 1.4E-90 3.1E-95 671.0 32.1 283 82-373 1-283 (284)
15 PRK14172 bifunctional 5,10-met 100.0 1.7E-90 3.7E-95 668.4 31.2 277 84-369 2-278 (278)
16 PRK14177 bifunctional 5,10-met 100.0 2.3E-90 5.1E-95 668.8 31.7 279 82-372 1-279 (284)
17 PRK14184 bifunctional 5,10-met 100.0 4.2E-90 9E-95 668.0 31.7 280 85-373 2-285 (286)
18 PRK14180 bifunctional 5,10-met 100.0 6.7E-90 1.5E-94 665.4 32.1 280 85-372 2-281 (282)
19 PRK14186 bifunctional 5,10-met 100.0 1.1E-89 2.4E-94 668.1 32.8 286 84-373 2-287 (297)
20 PRK14183 bifunctional 5,10-met 100.0 1.3E-89 2.8E-94 662.8 32.3 278 85-370 2-279 (281)
21 PRK14181 bifunctional 5,10-met 100.0 1E-89 2.2E-94 665.2 31.5 280 86-371 2-285 (287)
22 PRK10792 bifunctional 5,10-met 100.0 1.6E-89 3.5E-94 663.6 31.9 284 82-373 1-284 (285)
23 PRK14193 bifunctional 5,10-met 100.0 2.1E-89 4.6E-94 662.5 32.2 280 83-372 2-283 (284)
24 PRK14189 bifunctional 5,10-met 100.0 4.3E-89 9.3E-94 661.0 32.7 283 82-373 1-283 (285)
25 PRK14176 bifunctional 5,10-met 100.0 4.1E-89 8.8E-94 661.0 32.4 279 84-371 8-286 (287)
26 PRK14191 bifunctional 5,10-met 100.0 1.2E-88 2.6E-93 657.5 31.8 280 85-372 2-281 (285)
27 PRK14179 bifunctional 5,10-met 100.0 3.4E-88 7.4E-93 654.4 32.4 281 84-372 2-282 (284)
28 PRK14173 bifunctional 5,10-met 100.0 3E-88 6.5E-93 655.3 31.5 280 82-372 1-282 (287)
29 PRK14174 bifunctional 5,10-met 100.0 8.5E-88 1.8E-92 655.0 33.2 288 85-372 2-293 (295)
30 PRK14175 bifunctional 5,10-met 100.0 1.6E-87 3.5E-92 650.6 32.1 284 82-374 1-284 (286)
31 PRK14194 bifunctional 5,10-met 100.0 7.7E-87 1.7E-91 649.2 32.9 286 82-374 2-288 (301)
32 PRK14178 bifunctional 5,10-met 100.0 2.3E-86 4.9E-91 640.0 30.1 273 86-371 2-274 (279)
33 KOG4230 C1-tetrahydrofolate sy 100.0 6.3E-86 1.4E-90 671.6 27.4 291 82-372 1-292 (935)
34 PRK14188 bifunctional 5,10-met 100.0 2.3E-84 5.1E-89 631.7 33.7 287 84-372 2-289 (296)
35 PRK14192 bifunctional 5,10-met 100.0 9.9E-81 2.2E-85 603.6 31.1 282 83-373 2-283 (283)
36 KOG0089 Methylenetetrahydrofol 100.0 1.1E-79 2.5E-84 582.6 26.8 293 83-375 7-309 (309)
37 PF02882 THF_DHG_CYH_C: Tetrah 100.0 4.1E-53 8.9E-58 379.8 14.3 160 205-371 1-160 (160)
38 cd01079 NAD_bind_m-THF_DH NAD 100.0 7E-48 1.5E-52 354.5 15.5 158 197-372 1-196 (197)
39 cd05212 NAD_bind_m-THF_DH_Cycl 100.0 3.9E-41 8.4E-46 296.4 13.9 137 217-368 3-139 (140)
40 cd01080 NAD_bind_m-THF_DH_Cycl 100.0 4.9E-41 1.1E-45 303.8 14.7 168 197-369 1-168 (168)
41 PF00763 THF_DHG_CYH: Tetrahyd 100.0 2.9E-34 6.3E-39 245.3 14.0 117 85-202 1-117 (117)
42 PRK12549 shikimate 5-dehydroge 99.9 1E-22 2.2E-27 197.9 18.2 225 119-374 8-267 (284)
43 PRK12548 shikimate 5-dehydroge 99.9 2.3E-22 4.9E-27 195.6 15.7 222 120-374 13-276 (289)
44 PRK12749 quinate/shikimate deh 99.9 3.2E-22 6.8E-27 195.0 15.6 221 121-374 12-273 (288)
45 PRK00258 aroE shikimate 5-dehy 99.9 3E-22 6.4E-27 193.4 14.8 208 134-374 23-261 (278)
46 PRK12550 shikimate 5-dehydroge 99.9 8.6E-22 1.9E-26 190.6 16.8 225 112-374 6-256 (272)
47 TIGR01809 Shik-DH-AROM shikima 99.9 1.3E-21 2.9E-26 189.7 17.8 223 119-374 8-271 (282)
48 COG0169 AroE Shikimate 5-dehyd 99.9 6.2E-22 1.3E-26 192.6 15.3 209 133-374 23-266 (283)
49 PRK14027 quinate/shikimate deh 99.9 1.2E-21 2.6E-26 190.6 15.0 222 122-374 10-269 (283)
50 TIGR00507 aroE shikimate 5-deh 99.9 2.1E-21 4.5E-26 186.5 14.6 209 133-374 17-254 (270)
51 PLN02520 bifunctional 3-dehydr 99.8 3.3E-19 7.3E-24 186.7 17.1 221 119-374 255-515 (529)
52 PRK09310 aroDE bifunctional 3- 99.8 4.3E-19 9.3E-24 183.8 13.4 219 120-374 219-456 (477)
53 PRK08306 dipicolinate synthase 99.6 5.1E-15 1.1E-19 144.8 11.5 131 224-369 133-286 (296)
54 TIGR02853 spore_dpaA dipicolin 99.5 8.8E-14 1.9E-18 135.8 10.4 129 224-368 132-284 (287)
55 PF01488 Shikimate_DH: Shikima 99.2 2.8E-11 6.1E-16 105.4 4.8 89 231-320 1-115 (135)
56 cd01065 NAD_bind_Shikimate_DH 99.1 9.1E-10 2E-14 95.9 12.8 128 225-373 2-155 (155)
57 cd05191 NAD_bind_amino_acid_DH 99.1 3.2E-10 7E-15 91.3 7.8 78 224-314 1-86 (86)
58 PTZ00075 Adenosylhomocysteinas 99.0 3E-10 6.5E-15 117.8 6.5 116 231-350 243-374 (476)
59 PF00670 AdoHcyase_NAD: S-aden 99.0 7.2E-10 1.6E-14 100.3 7.3 91 227-318 7-114 (162)
60 COG0373 HemA Glutamyl-tRNA red 99.0 9.6E-10 2.1E-14 112.3 7.3 157 141-321 100-281 (414)
61 PRK13940 glutamyl-tRNA reducta 98.9 8E-09 1.7E-13 105.9 9.5 157 141-321 103-280 (414)
62 cd01078 NAD_bind_H4MPT_DH NADP 98.7 9.6E-08 2.1E-12 87.2 11.7 96 225-320 7-135 (194)
63 PRK14982 acyl-ACP reductase; P 98.7 9.6E-08 2.1E-12 95.8 11.5 95 227-321 140-253 (340)
64 PRK00676 hemA glutamyl-tRNA re 98.7 7.4E-08 1.6E-12 96.5 10.0 156 141-321 97-268 (338)
65 cd05311 NAD_bind_2_malic_enz N 98.7 6.6E-08 1.4E-12 91.5 8.9 93 225-320 8-133 (226)
66 PRK05476 S-adenosyl-L-homocyst 98.6 1.1E-07 2.4E-12 97.9 7.8 94 223-317 192-302 (425)
67 PLN00203 glutamyl-tRNA reducta 98.5 3.6E-07 7.8E-12 96.3 8.2 96 225-321 247-376 (519)
68 TIGR00518 alaDH alanine dehydr 98.5 6.9E-07 1.5E-11 90.4 9.5 123 240-368 165-319 (370)
69 TIGR00936 ahcY adenosylhomocys 98.4 7E-07 1.5E-11 91.5 9.0 94 224-318 176-286 (406)
70 PRK00045 hemA glutamyl-tRNA re 98.4 5.1E-07 1.1E-11 92.6 7.9 94 227-321 167-287 (423)
71 TIGR01035 hemA glutamyl-tRNA r 98.4 4.5E-07 9.8E-12 92.9 7.0 95 226-321 164-284 (417)
72 PF02826 2-Hacid_dh_C: D-isome 98.3 1.1E-06 2.3E-11 79.8 6.3 81 235-316 29-129 (178)
73 cd00401 AdoHcyase S-adenosyl-L 98.3 1.7E-06 3.7E-11 88.9 8.2 92 225-317 184-292 (413)
74 PLN02494 adenosylhomocysteinas 98.2 2E-06 4.4E-11 89.5 7.4 90 225-315 236-342 (477)
75 PLN02928 oxidoreductase family 98.2 2.2E-06 4.7E-11 86.1 7.1 134 237-372 154-335 (347)
76 COG0499 SAM1 S-adenosylhomocys 98.2 2.4E-06 5.3E-11 85.9 7.3 89 227-316 193-298 (420)
77 cd05213 NAD_bind_Glutamyl_tRNA 98.2 3.6E-06 7.8E-11 83.0 8.4 93 227-320 163-279 (311)
78 TIGR00561 pntA NAD(P) transhyd 98.1 2.5E-05 5.5E-10 82.3 11.6 90 227-317 139-287 (511)
79 PRK15438 erythronate-4-phospha 98.0 1.1E-05 2.4E-10 82.1 8.0 143 230-373 104-279 (378)
80 PRK00257 erythronate-4-phospha 98.0 5.6E-05 1.2E-09 77.1 13.0 142 231-373 105-279 (381)
81 cd01075 NAD_bind_Leu_Phe_Val_D 98.0 1.5E-05 3.2E-10 74.1 7.8 95 223-319 3-120 (200)
82 PRK13243 glyoxylate reductase; 98.0 1.2E-05 2.6E-10 80.3 7.3 81 237-318 145-244 (333)
83 PRK06436 glycerate dehydrogena 98.0 1.5E-05 3.3E-10 78.8 7.1 80 238-318 118-213 (303)
84 COG0686 Ald Alanine dehydrogen 98.0 6.6E-06 1.4E-10 81.6 4.5 77 240-317 166-271 (371)
85 PRK06932 glycerate dehydrogena 98.0 1.3E-05 2.9E-10 79.4 6.6 80 238-318 143-237 (314)
86 PRK06487 glycerate dehydrogena 97.9 1.7E-05 3.7E-10 78.7 6.8 80 238-318 144-237 (317)
87 PRK08410 2-hydroxyacid dehydro 97.9 2E-05 4.4E-10 78.0 7.2 80 238-318 141-236 (311)
88 PRK15469 ghrA bifunctional gly 97.9 2.1E-05 4.5E-10 78.1 7.0 80 238-318 132-230 (312)
89 PRK07574 formate dehydrogenase 97.9 2E-05 4.2E-10 80.5 7.0 133 238-372 188-357 (385)
90 COG5322 Predicted dehydrogenas 97.9 3.5E-05 7.5E-10 75.2 8.3 94 227-320 152-267 (351)
91 PRK12480 D-lactate dehydrogena 97.9 2.2E-05 4.7E-10 78.4 6.5 80 238-318 142-238 (330)
92 PRK08605 D-lactate dehydrogena 97.9 3.5E-05 7.5E-10 76.9 7.6 81 237-318 141-240 (332)
93 TIGR02992 ectoine_eutC ectoine 97.9 3.8E-05 8.3E-10 76.3 7.6 75 241-316 128-226 (326)
94 COG0111 SerA Phosphoglycerate 97.8 3.8E-05 8.2E-10 76.7 6.9 82 236-318 136-237 (324)
95 PRK15409 bifunctional glyoxyla 97.8 3.7E-05 8.1E-10 76.6 6.7 81 237-318 140-240 (323)
96 PLN02306 hydroxypyruvate reduc 97.8 3.8E-05 8.2E-10 78.4 6.8 80 237-317 160-275 (386)
97 KOG1370 S-adenosylhomocysteine 97.8 3.4E-05 7.4E-10 76.4 6.1 82 235-317 207-304 (434)
98 PRK06718 precorrin-2 dehydroge 97.8 4.3E-05 9.3E-10 71.3 6.2 112 238-365 6-141 (202)
99 PLN03139 formate dehydrogenase 97.8 4.9E-05 1.1E-09 77.6 6.8 133 238-372 195-364 (386)
100 PRK12862 malic enzyme; Reviewe 97.7 0.00022 4.9E-09 78.5 11.8 172 129-318 94-295 (763)
101 PRK11790 D-3-phosphoglycerate 97.7 7.5E-05 1.6E-09 76.7 7.4 79 237-316 146-241 (409)
102 PF01262 AlaDh_PNT_C: Alanine 97.7 2.5E-05 5.4E-10 70.3 3.1 78 239-317 17-142 (168)
103 PRK07232 bifunctional malic en 97.7 0.00029 6.3E-09 77.5 11.8 172 129-318 86-287 (752)
104 TIGR01327 PGDH D-3-phosphoglyc 97.7 8.2E-05 1.8E-09 78.7 7.3 81 237-318 133-233 (525)
105 PRK08291 ectoine utilization p 97.7 0.00016 3.5E-09 71.9 8.8 87 227-316 119-229 (330)
106 PRK13581 D-3-phosphoglycerate 97.7 9.2E-05 2E-09 78.3 7.3 81 237-318 135-234 (526)
107 PRK08618 ornithine cyclodeamin 97.6 0.00032 7E-09 69.6 9.7 74 241-316 126-223 (325)
108 PRK09424 pntA NAD(P) transhydr 97.6 0.00026 5.6E-09 74.8 9.2 90 227-317 140-288 (509)
109 PRK06141 ornithine cyclodeamin 97.5 0.00034 7.3E-09 69.2 9.0 77 239-316 122-221 (314)
110 COG1052 LdhA Lactate dehydroge 97.5 0.00015 3.3E-09 72.4 6.3 81 237-318 141-240 (324)
111 PF03446 NAD_binding_2: NAD bi 97.5 0.00012 2.5E-09 65.4 4.7 74 243-317 2-97 (163)
112 COG0281 SfcA Malic enzyme [Ene 97.5 0.00046 9.9E-09 70.9 9.3 170 127-314 98-300 (432)
113 PRK07340 ornithine cyclodeamin 97.5 0.00068 1.5E-08 66.9 10.2 77 238-316 121-219 (304)
114 PF13241 NAD_binding_7: Putati 97.5 0.00017 3.8E-09 59.9 4.7 60 238-298 3-73 (103)
115 PRK12861 malic enzyme; Reviewe 97.4 0.00078 1.7E-08 74.2 10.0 172 129-318 90-291 (764)
116 PF08501 Shikimate_dh_N: Shiki 97.4 0.00017 3.6E-09 58.1 3.4 48 134-184 14-61 (83)
117 PRK06719 precorrin-2 dehydroge 97.3 0.00033 7.2E-09 62.9 5.4 115 237-367 8-143 (157)
118 PRK14619 NAD(P)H-dependent gly 97.3 0.00047 1E-08 67.7 6.7 73 241-314 3-82 (308)
119 COG2084 MmsB 3-hydroxyisobutyr 97.3 0.00044 9.5E-09 68.1 6.1 73 243-316 1-97 (286)
120 KOG0069 Glyoxylate/hydroxypyru 97.3 0.00045 9.7E-09 69.4 5.9 79 237-316 157-255 (336)
121 PRK11199 tyrA bifunctional cho 97.2 0.00056 1.2E-08 69.4 6.3 75 241-316 97-177 (374)
122 PF01210 NAD_Gly3P_dh_N: NAD-d 97.1 0.00077 1.7E-08 59.9 5.5 69 244-313 1-102 (157)
123 COG2085 Predicted dinucleotide 97.1 0.00081 1.8E-08 63.5 5.3 73 243-318 2-96 (211)
124 PLN02712 arogenate dehydrogena 97.0 0.0012 2.5E-08 72.0 6.9 80 236-316 363-462 (667)
125 TIGR02371 ala_DH_arch alanine 97.0 0.0015 3.2E-08 65.2 7.0 75 241-316 127-224 (325)
126 TIGR01505 tartro_sem_red 2-hyd 97.0 0.0014 3E-08 63.6 6.1 71 244-315 1-94 (291)
127 PRK11559 garR tartronate semia 97.0 0.0018 3.8E-08 62.8 6.8 74 243-317 3-99 (296)
128 PF03807 F420_oxidored: NADP o 97.0 0.00049 1.1E-08 55.4 2.4 70 244-314 1-94 (96)
129 PRK13403 ketol-acid reductoiso 97.0 0.0014 3.1E-08 65.8 6.1 77 239-316 13-109 (335)
130 TIGR01470 cysG_Nterm siroheme 96.9 0.0016 3.5E-08 60.9 6.0 59 238-297 5-81 (205)
131 PRK01438 murD UDP-N-acetylmura 96.9 0.003 6.5E-08 65.4 8.6 129 233-368 7-147 (480)
132 COG1748 LYS9 Saccharopine dehy 96.9 0.0018 3.9E-08 66.3 6.6 111 243-367 2-140 (389)
133 PLN02256 arogenate dehydrogena 96.9 0.0023 5E-08 63.3 7.1 76 239-315 33-128 (304)
134 PRK15461 NADH-dependent gamma- 96.9 0.0017 3.7E-08 63.5 6.0 74 243-317 2-98 (296)
135 PRK13814 pyrB aspartate carbam 96.8 0.18 3.8E-06 50.4 19.6 147 128-291 56-223 (310)
136 PLN02342 ornithine carbamoyltr 96.8 0.12 2.7E-06 52.4 18.2 188 85-293 47-267 (348)
137 COG0287 TyrA Prephenate dehydr 96.7 0.003 6.4E-08 62.1 6.4 74 242-316 3-100 (279)
138 PRK07502 cyclohexadienyl dehyd 96.7 0.0027 6E-08 62.1 6.0 73 242-315 6-101 (307)
139 cd05312 NAD_bind_1_malic_enz N 96.6 0.0038 8.2E-08 61.4 5.9 92 225-318 8-143 (279)
140 PRK06545 prephenate dehydrogen 96.6 0.0035 7.7E-08 63.1 5.9 73 243-316 1-97 (359)
141 PF02423 OCD_Mu_crystall: Orni 96.6 0.0062 1.3E-07 60.4 7.4 74 242-316 128-226 (313)
142 PRK02102 ornithine carbamoyltr 96.6 0.21 4.6E-06 50.3 18.3 157 116-293 47-232 (331)
143 PRK07417 arogenate dehydrogena 96.6 0.002 4.4E-08 62.3 3.8 72 244-316 2-93 (279)
144 PRK06407 ornithine cyclodeamin 96.6 0.0059 1.3E-07 60.4 7.1 76 241-317 116-215 (301)
145 PRK14804 ornithine carbamoyltr 96.6 0.34 7.4E-06 48.3 19.6 148 127-292 53-225 (311)
146 PRK04284 ornithine carbamoyltr 96.5 0.19 4.1E-06 50.7 17.7 154 117-292 47-231 (332)
147 PRK03515 ornithine carbamoyltr 96.5 0.043 9.3E-07 55.3 13.1 146 127-292 55-232 (336)
148 PRK06046 alanine dehydrogenase 96.5 0.0063 1.4E-07 60.6 7.1 74 241-316 128-225 (326)
149 COG1648 CysG Siroheme synthase 96.5 0.005 1.1E-07 58.1 6.0 115 238-367 8-146 (210)
150 PRK12562 ornithine carbamoyltr 96.5 0.23 5E-06 50.1 18.2 148 127-293 55-233 (334)
151 PF07991 IlvN: Acetohydroxy ac 96.5 0.0042 9.1E-08 56.7 5.2 76 240-316 2-98 (165)
152 PRK06823 ornithine cyclodeamin 96.5 0.0062 1.3E-07 60.6 6.9 75 241-316 127-224 (315)
153 TIGR01692 HIBADH 3-hydroxyisob 96.5 0.0045 9.8E-08 60.1 5.8 69 247-316 1-92 (288)
154 TIGR00670 asp_carb_tr aspartat 96.5 0.22 4.8E-06 49.5 17.7 147 128-292 50-223 (301)
155 PRK14031 glutamate dehydrogena 96.5 0.02 4.3E-07 59.8 10.6 52 220-272 202-257 (444)
156 PRK05579 bifunctional phosphop 96.5 0.017 3.7E-07 59.5 10.1 94 224-317 168-305 (399)
157 PRK08818 prephenate dehydrogen 96.5 0.0048 1E-07 62.9 6.0 76 241-316 3-90 (370)
158 cd00762 NAD_bind_malic_enz NAD 96.5 0.004 8.6E-08 60.5 5.1 92 225-318 8-144 (254)
159 PF00056 Ldh_1_N: lactate/mala 96.4 0.0059 1.3E-07 53.7 5.7 53 244-296 2-80 (141)
160 PLN03129 NADP-dependent malic 96.4 0.02 4.3E-07 61.4 10.6 97 220-318 299-439 (581)
161 PRK01713 ornithine carbamoyltr 96.4 0.054 1.2E-06 54.6 13.2 145 128-292 57-232 (334)
162 PRK12490 6-phosphogluconate de 96.4 0.0065 1.4E-07 59.5 6.5 72 244-316 2-96 (299)
163 PRK11064 wecC UDP-N-acetyl-D-m 96.4 0.0048 1.1E-07 63.5 5.8 74 243-317 4-122 (415)
164 PRK02255 putrescine carbamoylt 96.4 0.3 6.5E-06 49.4 18.2 155 116-291 43-228 (338)
165 PRK12491 pyrroline-5-carboxyla 96.4 0.0052 1.1E-07 59.8 5.5 70 243-314 3-97 (272)
166 PRK15059 tartronate semialdehy 96.4 0.0062 1.3E-07 59.7 5.8 72 244-316 2-95 (292)
167 PRK07679 pyrroline-5-carboxyla 96.3 0.0071 1.5E-07 58.5 6.1 72 241-313 2-98 (279)
168 PRK13529 malate dehydrogenase; 96.3 0.029 6.3E-07 60.0 10.9 164 133-314 173-417 (563)
169 TIGR00658 orni_carb_tr ornithi 96.3 0.32 7E-06 48.3 17.4 155 117-292 41-223 (304)
170 PRK11891 aspartate carbamoyltr 96.2 0.092 2E-06 54.7 14.0 150 128-294 137-317 (429)
171 PLN02527 aspartate carbamoyltr 96.2 0.12 2.6E-06 51.5 14.2 148 128-293 50-226 (306)
172 PRK08655 prephenate dehydrogen 96.2 0.0084 1.8E-07 62.2 6.2 71 244-315 2-93 (437)
173 PF03949 Malic_M: Malic enzyme 96.2 0.0057 1.2E-07 59.5 4.6 91 225-317 8-143 (255)
174 TIGR00872 gnd_rel 6-phosphoglu 96.2 0.0082 1.8E-07 58.8 5.6 72 244-316 2-95 (298)
175 PRK14618 NAD(P)H-dependent gly 96.1 0.0098 2.1E-07 58.7 6.0 73 242-315 4-105 (328)
176 PRK14805 ornithine carbamoyltr 96.1 0.58 1.3E-05 46.6 18.5 146 128-293 49-222 (302)
177 PRK00094 gpsA NAD(P)H-dependen 96.1 0.0092 2E-07 58.1 5.7 74 243-317 2-110 (325)
178 PLN02688 pyrroline-5-carboxyla 96.1 0.011 2.3E-07 56.4 6.1 68 244-313 2-94 (266)
179 PRK05479 ketol-acid reductoiso 96.1 0.01 2.2E-07 59.7 6.1 71 239-310 14-104 (330)
180 PRK09599 6-phosphogluconate de 96.1 0.012 2.7E-07 57.5 6.6 72 244-316 2-96 (301)
181 PRK14106 murD UDP-N-acetylmura 96.1 0.011 2.4E-07 60.5 6.5 37 239-276 2-38 (450)
182 PRK08507 prephenate dehydrogen 96.1 0.013 2.8E-07 56.5 6.4 70 244-316 2-93 (275)
183 PRK00856 pyrB aspartate carbam 96.1 0.15 3.3E-06 50.7 14.0 150 128-294 56-222 (305)
184 PF10727 Rossmann-like: Rossma 96.1 0.0082 1.8E-07 52.4 4.5 72 242-314 10-104 (127)
185 PRK09260 3-hydroxybutyryl-CoA 96.1 0.012 2.5E-07 57.2 6.0 72 243-315 2-119 (288)
186 PRK00779 ornithine carbamoyltr 96.0 0.14 3E-06 50.9 13.6 148 127-292 53-224 (304)
187 PRK07589 ornithine cyclodeamin 96.0 0.016 3.4E-07 58.7 6.9 74 242-316 129-227 (346)
188 cd05291 HicDH_like L-2-hydroxy 96.0 0.014 3E-07 57.5 6.3 53 243-296 1-79 (306)
189 cd05313 NAD_bind_2_Glu_DH NAD( 96.0 0.021 4.5E-07 55.5 7.3 55 220-275 12-71 (254)
190 TIGR03026 NDP-sugDHase nucleot 96.0 0.018 3.8E-07 58.9 7.1 72 244-316 2-122 (411)
191 PRK02472 murD UDP-N-acetylmura 95.9 0.017 3.6E-07 59.1 6.8 123 239-368 2-133 (447)
192 TIGR03316 ygeW probable carbam 95.9 0.14 3.1E-06 52.1 13.3 155 128-292 53-252 (357)
193 PRK06949 short chain dehydroge 95.9 0.012 2.6E-07 54.6 5.1 39 238-276 5-43 (258)
194 PRK05562 precorrin-2 dehydroge 95.9 0.014 3E-07 55.7 5.5 60 238-298 21-98 (223)
195 cd01076 NAD_bind_1_Glu_DH NAD( 95.8 0.023 5E-07 54.1 6.7 53 221-274 6-63 (227)
196 PF03721 UDPG_MGDP_dh_N: UDP-g 95.8 0.01 2.2E-07 54.7 4.1 53 243-296 1-87 (185)
197 PRK09414 glutamate dehydrogena 95.8 0.061 1.3E-06 56.2 10.3 51 221-272 207-261 (445)
198 PTZ00317 NADP-dependent malic 95.8 0.071 1.5E-06 57.1 10.9 164 133-314 175-416 (559)
199 TIGR00465 ilvC ketol-acid redu 95.8 0.018 3.9E-07 57.4 6.1 55 240-295 1-69 (314)
200 PRK06398 aldose dehydrogenase; 95.7 0.023 5E-07 53.5 6.4 57 239-295 3-82 (258)
201 PRK06138 short chain dehydroge 95.7 0.019 4.2E-07 52.9 5.7 37 239-275 2-38 (252)
202 PRK07200 aspartate/ornithine c 95.7 0.3 6.4E-06 50.5 14.7 167 116-293 60-270 (395)
203 PRK00421 murC UDP-N-acetylmura 95.7 0.023 5.1E-07 58.7 6.8 120 240-368 5-132 (461)
204 PTZ00117 malate dehydrogenase; 95.7 0.032 6.8E-07 55.5 7.4 56 240-297 3-85 (319)
205 PRK12367 short chain dehydroge 95.7 0.022 4.7E-07 54.1 6.0 57 239-295 11-89 (245)
206 PLN02712 arogenate dehydrogena 95.6 0.018 3.9E-07 62.9 6.0 76 239-315 49-144 (667)
207 PRK06550 fabG 3-ketoacyl-(acyl 95.6 0.027 5.8E-07 51.6 6.2 57 239-295 2-77 (235)
208 PF01118 Semialdhyde_dh: Semia 95.6 0.0073 1.6E-07 51.3 2.3 74 244-317 1-100 (121)
209 PRK14030 glutamate dehydrogena 95.6 0.086 1.9E-06 55.1 10.5 50 221-271 203-256 (445)
210 PRK09072 short chain dehydroge 95.6 0.018 4E-07 54.0 5.1 38 239-276 2-39 (263)
211 PRK08192 aspartate carbamoyltr 95.6 0.2 4.4E-06 50.6 12.8 144 134-294 61-235 (338)
212 TIGR01915 npdG NADPH-dependent 95.6 0.02 4.2E-07 53.6 5.2 69 244-314 2-101 (219)
213 PRK06463 fabG 3-ketoacyl-(acyl 95.6 0.032 7E-07 52.0 6.6 38 238-275 3-40 (255)
214 PRK06199 ornithine cyclodeamin 95.6 0.027 5.8E-07 57.6 6.4 76 241-317 154-262 (379)
215 PRK06523 short chain dehydroge 95.5 0.031 6.7E-07 52.1 6.4 38 238-275 5-42 (260)
216 PRK07856 short chain dehydroge 95.5 0.017 3.8E-07 53.8 4.6 37 239-275 3-39 (252)
217 PLN02350 phosphogluconate dehy 95.5 0.022 4.8E-07 60.2 5.9 73 244-317 8-110 (493)
218 PTZ00142 6-phosphogluconate de 95.5 0.023 5E-07 59.7 5.9 73 243-316 2-103 (470)
219 PRK08293 3-hydroxybutyryl-CoA 95.5 0.029 6.4E-07 54.4 6.2 71 243-314 4-120 (287)
220 PRK07680 late competence prote 95.5 0.022 4.8E-07 54.8 5.3 69 244-314 2-96 (273)
221 PRK00066 ldh L-lactate dehydro 95.5 0.029 6.2E-07 55.8 6.2 55 241-296 5-84 (315)
222 PLN02586 probable cinnamyl alc 95.4 0.055 1.2E-06 54.0 7.9 93 223-316 165-280 (360)
223 cd05211 NAD_bind_Glu_Leu_Phe_V 95.4 0.042 9.1E-07 52.0 6.6 48 228-276 9-57 (217)
224 PRK01710 murD UDP-N-acetylmura 95.3 0.037 8E-07 57.3 6.7 35 240-275 12-46 (458)
225 PF13460 NAD_binding_10: NADH( 95.3 0.03 6.5E-07 49.5 5.3 52 245-296 1-71 (183)
226 PRK11064 wecC UDP-N-acetyl-D-m 95.3 0.3 6.4E-06 50.4 13.3 75 237-312 315-414 (415)
227 PLN02477 glutamate dehydrogena 95.3 0.04 8.7E-07 57.0 6.7 54 221-275 181-239 (410)
228 PRK05866 short chain dehydroge 95.3 0.031 6.8E-07 54.1 5.6 39 237-275 35-73 (293)
229 PRK08862 short chain dehydroge 95.3 0.02 4.2E-07 53.6 4.0 41 239-279 2-42 (227)
230 PRK10637 cysG siroheme synthas 95.2 0.025 5.5E-07 58.9 5.2 113 238-365 8-144 (457)
231 PLN02858 fructose-bisphosphate 95.2 0.027 5.9E-07 66.1 6.0 75 241-316 3-100 (1378)
232 PRK12481 2-deoxy-D-gluconate 3 95.2 0.037 8.1E-07 51.9 5.9 37 239-275 5-41 (251)
233 PRK07424 bifunctional sterol d 95.2 0.039 8.4E-07 56.9 6.4 40 237-276 173-212 (406)
234 PRK12828 short chain dehydroge 95.2 0.027 5.8E-07 51.2 4.6 38 239-276 4-41 (239)
235 COG0771 MurD UDP-N-acetylmuram 95.2 0.07 1.5E-06 55.8 8.1 123 240-369 5-136 (448)
236 PRK07530 3-hydroxybutyryl-CoA 95.1 0.024 5.2E-07 55.0 4.2 70 243-314 5-120 (292)
237 PRK04523 N-acetylornithine car 95.1 0.34 7.4E-06 48.9 12.5 153 127-293 48-252 (335)
238 PRK07523 gluconate 5-dehydroge 95.1 0.028 6E-07 52.4 4.5 38 239-276 7-44 (255)
239 PRK06130 3-hydroxybutyryl-CoA 95.1 0.039 8.4E-07 53.9 5.6 53 243-296 5-90 (311)
240 PF02737 3HCDH_N: 3-hydroxyacy 95.1 0.042 9.2E-07 50.2 5.5 50 244-295 1-88 (180)
241 KOG0068 D-3-phosphoglycerate d 95.1 0.038 8.2E-07 55.9 5.5 78 236-314 140-236 (406)
242 PRK12939 short chain dehydroge 95.1 0.045 9.8E-07 50.3 5.8 37 239-275 4-40 (250)
243 PTZ00082 L-lactate dehydrogena 95.0 0.071 1.5E-06 53.2 7.3 56 240-297 4-86 (321)
244 PLN02353 probable UDP-glucose 95.0 0.31 6.6E-06 51.4 12.4 79 236-314 318-447 (473)
245 PRK00141 murD UDP-N-acetylmura 95.0 0.047 1E-06 56.9 6.3 124 239-368 12-146 (473)
246 PRK03369 murD UDP-N-acetylmura 95.0 0.045 9.8E-07 57.3 6.2 111 240-368 10-142 (488)
247 PRK06124 gluconate 5-dehydroge 95.0 0.025 5.3E-07 52.7 3.8 40 237-276 6-45 (256)
248 PRK09880 L-idonate 5-dehydroge 95.0 0.076 1.7E-06 52.2 7.5 84 231-316 160-268 (343)
249 TIGR00873 gnd 6-phosphoglucona 94.9 0.024 5.3E-07 59.4 4.1 72 244-316 1-100 (467)
250 COG3288 PntA NAD/NADP transhyd 94.9 0.021 4.4E-07 57.1 3.2 136 227-369 139-331 (356)
251 PRK06171 sorbitol-6-phosphate 94.9 0.063 1.4E-06 50.3 6.5 37 239-275 6-42 (266)
252 PRK06476 pyrroline-5-carboxyla 94.9 0.037 8.1E-07 52.7 4.9 70 244-314 2-93 (258)
253 PLN02858 fructose-bisphosphate 94.9 0.036 7.7E-07 65.2 5.6 74 242-316 324-420 (1378)
254 PRK08085 gluconate 5-dehydroge 94.9 0.028 6.1E-07 52.3 4.0 37 239-275 6-42 (254)
255 PLN02253 xanthoxin dehydrogena 94.9 0.051 1.1E-06 51.4 5.7 37 239-275 15-51 (280)
256 TIGR02356 adenyl_thiF thiazole 94.9 0.026 5.5E-07 52.5 3.6 35 239-274 18-53 (202)
257 COG2423 Predicted ornithine cy 94.9 0.082 1.8E-06 53.3 7.4 75 241-316 129-227 (330)
258 PRK07231 fabG 3-ketoacyl-(acyl 94.8 0.039 8.5E-07 50.7 4.8 38 239-276 2-39 (251)
259 PRK08339 short chain dehydroge 94.8 0.034 7.4E-07 52.7 4.5 38 238-275 4-41 (263)
260 TIGR01832 kduD 2-deoxy-D-gluco 94.8 0.046 1E-06 50.5 5.1 37 239-275 2-38 (248)
261 PRK05867 short chain dehydroge 94.8 0.038 8.2E-07 51.5 4.6 37 239-275 6-42 (253)
262 PRK08229 2-dehydropantoate 2-r 94.8 0.061 1.3E-06 53.0 6.3 69 243-313 3-106 (341)
263 PRK07062 short chain dehydroge 94.8 0.033 7E-07 52.2 4.2 38 238-275 4-41 (265)
264 cd00650 LDH_MDH_like NAD-depen 94.8 0.064 1.4E-06 51.5 6.3 53 245-297 1-82 (263)
265 PLN02545 3-hydroxybutyryl-CoA 94.8 0.043 9.3E-07 53.4 5.1 72 243-315 5-121 (295)
266 COG0569 TrkA K+ transport syst 94.8 0.041 9E-07 52.1 4.8 52 243-295 1-76 (225)
267 PLN02968 Probable N-acetyl-gam 94.7 0.035 7.5E-07 56.8 4.5 76 241-318 37-138 (381)
268 TIGR03325 BphB_TodD cis-2,3-di 94.7 0.042 9E-07 51.6 4.7 37 239-275 2-38 (262)
269 TIGR03366 HpnZ_proposed putati 94.7 0.098 2.1E-06 50.0 7.3 92 223-316 103-220 (280)
270 PRK06935 2-deoxy-D-gluconate 3 94.7 0.054 1.2E-06 50.6 5.4 38 238-275 11-48 (258)
271 TIGR00521 coaBC_dfp phosphopan 94.7 0.1 2.2E-06 53.6 7.8 76 223-298 163-278 (390)
272 PRK07063 short chain dehydroge 94.7 0.033 7.2E-07 52.0 3.9 37 239-275 4-40 (260)
273 COG0078 ArgF Ornithine carbamo 94.7 0.14 3.1E-06 51.0 8.4 139 134-293 61-229 (310)
274 PRK01368 murD UDP-N-acetylmura 94.7 0.089 1.9E-06 54.8 7.4 119 241-368 5-129 (454)
275 PRK08213 gluconate 5-dehydroge 94.7 0.039 8.5E-07 51.5 4.3 39 237-275 7-45 (259)
276 cd00757 ThiF_MoeB_HesA_family 94.6 0.027 5.9E-07 53.1 3.2 77 239-316 18-145 (228)
277 PRK06172 short chain dehydroge 94.6 0.034 7.3E-07 51.7 3.8 38 239-276 4-41 (253)
278 PRK05717 oxidoreductase; Valid 94.6 0.039 8.5E-07 51.5 4.3 39 237-275 5-43 (255)
279 PRK08220 2,3-dihydroxybenzoate 94.6 0.08 1.7E-06 48.9 6.3 38 238-275 4-41 (252)
280 PRK08628 short chain dehydroge 94.6 0.053 1.1E-06 50.5 5.1 39 237-275 2-40 (258)
281 PRK08265 short chain dehydroge 94.6 0.042 9.2E-07 51.7 4.5 38 239-276 3-40 (261)
282 COG0677 WecC UDP-N-acetyl-D-ma 94.6 0.62 1.3E-05 48.3 12.9 160 132-314 229-420 (436)
283 PLN00141 Tic62-NAD(P)-related 94.6 0.077 1.7E-06 49.8 6.1 38 238-275 13-50 (251)
284 PRK12937 short chain dehydroge 94.5 0.098 2.1E-06 48.0 6.6 37 239-275 2-38 (245)
285 PRK06129 3-hydroxyacyl-CoA deh 94.5 0.076 1.6E-06 52.2 6.1 53 243-296 3-93 (308)
286 PRK06182 short chain dehydroge 94.5 0.065 1.4E-06 50.6 5.4 35 241-275 2-36 (273)
287 PRK06057 short chain dehydroge 94.5 0.051 1.1E-06 50.7 4.6 37 240-276 5-41 (255)
288 PRK12936 3-ketoacyl-(acyl-carr 94.5 0.072 1.6E-06 48.8 5.5 37 239-275 3-39 (245)
289 PRK06179 short chain dehydroge 94.4 0.047 1E-06 51.3 4.3 35 241-275 3-37 (270)
290 TIGR01763 MalateDH_bact malate 94.4 0.1 2.2E-06 51.7 6.9 53 243-297 2-81 (305)
291 PRK15057 UDP-glucose 6-dehydro 94.4 0.09 1.9E-06 53.9 6.5 71 244-317 2-120 (388)
292 PRK06035 3-hydroxyacyl-CoA deh 94.4 0.059 1.3E-06 52.3 5.0 32 243-275 4-35 (291)
293 TIGR03589 PseB UDP-N-acetylglu 94.4 0.079 1.7E-06 52.1 5.9 56 240-295 2-84 (324)
294 PLN02986 cinnamyl-alcohol dehy 94.4 0.12 2.6E-06 50.1 7.1 36 240-275 3-38 (322)
295 KOG1494 NAD-dependent malate d 94.3 0.047 1E-06 54.1 4.1 58 239-297 25-108 (345)
296 PRK12829 short chain dehydroge 94.3 0.07 1.5E-06 49.5 5.2 37 239-275 8-44 (264)
297 PRK06125 short chain dehydroge 94.3 0.059 1.3E-06 50.4 4.7 38 238-275 3-40 (259)
298 TIGR01963 PHB_DH 3-hydroxybuty 94.3 0.093 2E-06 48.4 5.9 35 242-276 1-35 (255)
299 PRK14874 aspartate-semialdehyd 94.3 0.045 9.7E-07 54.8 4.1 76 242-317 1-97 (334)
300 PRK05872 short chain dehydroge 94.3 0.043 9.4E-07 53.0 3.8 39 238-276 5-43 (296)
301 PRK07097 gluconate 5-dehydroge 94.3 0.048 1.1E-06 51.3 4.1 40 237-276 5-44 (265)
302 PRK09242 tropinone reductase; 94.3 0.042 9.2E-07 51.2 3.6 38 238-275 5-42 (257)
303 TIGR02354 thiF_fam2 thiamine b 94.3 0.079 1.7E-06 49.4 5.4 36 238-274 17-53 (200)
304 PRK07890 short chain dehydroge 94.3 0.056 1.2E-06 50.1 4.4 36 240-275 3-38 (258)
305 PRK06223 malate dehydrogenase; 94.3 0.12 2.6E-06 50.6 6.9 53 243-297 3-82 (307)
306 PRK08703 short chain dehydroge 94.2 0.071 1.5E-06 49.2 5.0 38 239-276 3-40 (239)
307 PRK07060 short chain dehydroge 94.2 0.062 1.3E-06 49.3 4.6 39 238-276 5-43 (245)
308 PRK09291 short chain dehydroge 94.2 0.075 1.6E-06 49.2 5.1 34 242-275 2-35 (257)
309 PRK14806 bifunctional cyclohex 94.2 0.064 1.4E-06 58.7 5.4 73 243-316 4-99 (735)
310 PRK07066 3-hydroxybutyryl-CoA 94.2 0.12 2.5E-06 51.9 6.7 72 243-316 8-120 (321)
311 TIGR02355 moeB molybdopterin s 94.2 0.065 1.4E-06 51.4 4.8 34 239-273 21-55 (240)
312 PRK09186 flagellin modificatio 94.2 0.055 1.2E-06 50.1 4.1 36 240-275 2-37 (256)
313 PLN02514 cinnamyl-alcohol dehy 94.2 0.13 2.7E-06 51.2 7.0 93 223-316 162-277 (357)
314 PRK08993 2-deoxy-D-gluconate 3 94.2 0.12 2.5E-06 48.4 6.3 36 239-274 7-42 (253)
315 TIGR02622 CDP_4_6_dhtase CDP-g 94.2 0.11 2.4E-06 51.2 6.5 36 240-275 2-37 (349)
316 PRK08264 short chain dehydroge 94.1 0.071 1.5E-06 48.9 4.7 38 239-276 3-41 (238)
317 PRK12475 thiamine/molybdopteri 94.1 0.078 1.7E-06 53.4 5.4 36 238-274 20-56 (338)
318 PRK04690 murD UDP-N-acetylmura 94.1 0.12 2.5E-06 54.0 6.8 122 240-368 6-140 (468)
319 PRK07634 pyrroline-5-carboxyla 94.1 0.11 2.3E-06 48.8 6.0 54 241-295 3-76 (245)
320 PRK06841 short chain dehydroge 94.1 0.081 1.8E-06 49.1 5.1 38 238-275 11-48 (255)
321 PRK07774 short chain dehydroge 94.1 0.07 1.5E-06 49.2 4.6 37 239-275 3-39 (250)
322 PRK05854 short chain dehydroge 94.1 0.048 1E-06 53.3 3.7 38 238-275 10-47 (313)
323 PRK07531 bifunctional 3-hydrox 94.1 0.11 2.3E-06 54.9 6.4 53 243-296 5-91 (495)
324 PRK07819 3-hydroxybutyryl-CoA 94.1 0.11 2.4E-06 50.8 6.2 70 243-314 6-121 (286)
325 cd08292 ETR_like_2 2-enoyl thi 94.1 0.21 4.5E-06 47.7 8.0 93 223-316 122-240 (324)
326 TIGR02825 B4_12hDH leukotriene 94.1 0.11 2.4E-06 50.3 6.2 89 227-315 124-238 (325)
327 PTZ00079 NADP-specific glutama 94.0 0.12 2.7E-06 54.1 6.7 53 222-275 213-270 (454)
328 PRK07035 short chain dehydroge 94.0 0.052 1.1E-06 50.4 3.7 38 238-275 4-41 (252)
329 KOG1198 Zinc-binding oxidoredu 94.0 0.28 6E-06 49.7 9.1 85 222-306 132-247 (347)
330 COG0240 GpsA Glycerol-3-phosph 94.0 0.11 2.5E-06 52.2 6.2 71 243-314 2-105 (329)
331 PRK12809 putative oxidoreducta 94.0 0.26 5.6E-06 53.4 9.5 34 241-275 309-342 (639)
332 PRK05225 ketol-acid reductoiso 94.0 0.055 1.2E-06 56.8 4.1 79 239-318 33-136 (487)
333 PLN02989 cinnamyl-alcohol dehy 94.0 0.12 2.6E-06 50.1 6.2 33 241-273 4-36 (325)
334 TIGR01724 hmd_rel H2-forming N 94.0 0.09 2E-06 53.0 5.5 63 255-317 32-119 (341)
335 PRK06196 oxidoreductase; Provi 94.0 0.058 1.3E-06 52.5 4.1 39 237-275 21-59 (315)
336 PRK08416 7-alpha-hydroxysteroi 94.0 0.075 1.6E-06 49.9 4.7 37 238-274 4-40 (260)
337 PRK06180 short chain dehydroge 94.0 0.1 2.2E-06 49.6 5.7 35 241-275 3-37 (277)
338 PRK06728 aspartate-semialdehyd 94.0 0.2 4.2E-06 50.9 7.9 113 241-361 4-139 (347)
339 PRK07478 short chain dehydroge 94.0 0.058 1.3E-06 50.2 3.9 37 239-275 3-39 (254)
340 PRK08277 D-mannonate oxidoredu 94.0 0.053 1.1E-06 51.3 3.6 38 238-275 6-43 (278)
341 PRK01390 murD UDP-N-acetylmura 94.0 0.12 2.6E-06 53.3 6.5 35 240-275 7-41 (460)
342 cd05292 LDH_2 A subgroup of L- 93.9 0.13 2.7E-06 51.0 6.4 52 244-296 2-78 (308)
343 PRK15181 Vi polysaccharide bio 93.9 0.15 3.2E-06 50.5 6.9 39 236-274 9-47 (348)
344 cd05293 LDH_1 A subgroup of L- 93.9 0.15 3.3E-06 50.7 7.0 52 243-296 4-82 (312)
345 PRK07024 short chain dehydroge 93.9 0.083 1.8E-06 49.4 4.9 34 242-275 2-35 (257)
346 PRK06200 2,3-dihydroxy-2,3-dih 93.9 0.058 1.3E-06 50.6 3.8 36 240-275 4-39 (263)
347 PRK08223 hypothetical protein; 93.9 0.11 2.4E-06 51.4 5.9 35 238-273 23-58 (287)
348 PRK12429 3-hydroxybutyrate deh 93.9 0.083 1.8E-06 48.8 4.7 36 240-275 2-37 (258)
349 PRK13394 3-hydroxybutyrate deh 93.9 0.067 1.4E-06 49.6 4.1 37 239-275 4-40 (262)
350 PRK06928 pyrroline-5-carboxyla 93.9 0.11 2.3E-06 50.6 5.6 52 243-295 2-74 (277)
351 PLN02427 UDP-apiose/xylose syn 93.9 0.12 2.7E-06 51.6 6.3 60 236-295 8-96 (386)
352 PRK12826 3-ketoacyl-(acyl-carr 93.9 0.069 1.5E-06 49.0 4.1 36 240-275 4-39 (251)
353 PLN02662 cinnamyl-alcohol dehy 93.9 0.14 3.1E-06 49.2 6.5 34 241-274 3-36 (322)
354 PRK07825 short chain dehydroge 93.9 0.073 1.6E-06 50.2 4.4 37 239-275 2-38 (273)
355 cd08230 glucose_DH Glucose deh 93.9 0.12 2.5E-06 51.1 6.0 77 240-317 171-272 (355)
356 TIGR01850 argC N-acetyl-gamma- 93.9 0.094 2E-06 52.8 5.4 76 243-318 1-103 (346)
357 PRK08589 short chain dehydroge 93.9 0.066 1.4E-06 50.8 4.1 37 239-275 3-39 (272)
358 PRK06500 short chain dehydroge 93.8 0.065 1.4E-06 49.3 3.9 36 240-275 4-39 (249)
359 PRK06194 hypothetical protein; 93.8 0.067 1.5E-06 50.7 4.1 37 239-275 3-39 (287)
360 PRK05876 short chain dehydroge 93.8 0.058 1.2E-06 51.6 3.7 37 239-275 3-39 (275)
361 cd01492 Aos1_SUMO Ubiquitin ac 93.8 0.19 4.2E-06 46.6 7.0 35 239-274 18-53 (197)
362 cd08294 leukotriene_B4_DH_like 93.8 0.17 3.7E-06 48.5 6.9 93 223-315 125-242 (329)
363 COG0039 Mdh Malate/lactate deh 93.8 0.14 3.1E-06 51.3 6.4 52 243-296 1-80 (313)
364 cd05188 MDR Medium chain reduc 93.8 0.31 6.7E-06 44.7 8.3 94 223-317 116-235 (271)
365 PRK07576 short chain dehydroge 93.8 0.08 1.7E-06 50.0 4.5 37 239-275 6-42 (264)
366 PRK08936 glucose-1-dehydrogena 93.8 0.1 2.2E-06 48.9 5.1 37 239-275 4-40 (261)
367 PRK02006 murD UDP-N-acetylmura 93.7 0.16 3.5E-06 53.1 7.1 124 240-368 5-146 (498)
368 PLN02178 cinnamyl-alcohol dehy 93.7 0.18 4E-06 50.8 7.2 93 223-316 159-275 (375)
369 PRK05653 fabG 3-ketoacyl-(acyl 93.7 0.11 2.3E-06 47.4 5.0 38 239-276 2-39 (246)
370 PRK07067 sorbitol dehydrogenas 93.7 0.073 1.6E-06 49.6 4.0 36 240-275 4-39 (257)
371 PRK05565 fabG 3-ketoacyl-(acyl 93.7 0.087 1.9E-06 48.2 4.4 38 239-276 2-40 (247)
372 PRK12743 oxidoreductase; Provi 93.7 0.16 3.5E-06 47.4 6.3 34 241-274 1-34 (256)
373 PRK05786 fabG 3-ketoacyl-(acyl 93.6 0.089 1.9E-06 48.2 4.4 38 239-276 2-39 (238)
374 PRK05690 molybdopterin biosynt 93.6 0.11 2.4E-06 49.9 5.2 34 239-273 29-63 (245)
375 PRK06077 fabG 3-ketoacyl-(acyl 93.6 0.15 3.3E-06 46.9 6.0 36 239-274 3-38 (252)
376 PF13738 Pyr_redox_3: Pyridine 93.6 0.098 2.1E-06 46.9 4.5 37 239-276 164-200 (203)
377 CHL00194 ycf39 Ycf39; Provisio 93.6 0.13 2.8E-06 50.2 5.7 51 244-294 2-73 (317)
378 KOG0725 Reductases with broad 93.6 0.088 1.9E-06 51.3 4.5 39 238-276 4-42 (270)
379 PRK07666 fabG 3-ketoacyl-(acyl 93.6 0.096 2.1E-06 48.2 4.5 38 239-276 4-41 (239)
380 TIGR01214 rmlD dTDP-4-dehydror 93.6 0.15 3.3E-06 48.2 6.0 53 244-296 1-61 (287)
381 PLN02602 lactate dehydrogenase 93.6 0.19 4.2E-06 50.9 7.0 52 243-296 38-116 (350)
382 cd08295 double_bond_reductase_ 93.5 0.2 4.3E-06 49.0 6.9 93 223-315 133-252 (338)
383 PRK06079 enoyl-(acyl carrier p 93.5 0.1 2.2E-06 49.1 4.7 37 239-275 4-42 (252)
384 PRK07814 short chain dehydroge 93.5 0.1 2.2E-06 49.1 4.7 37 239-275 7-43 (263)
385 PRK05808 3-hydroxybutyryl-CoA 93.5 0.089 1.9E-06 50.8 4.4 31 243-274 4-34 (282)
386 TIGR01851 argC_other N-acetyl- 93.5 0.11 2.3E-06 52.0 5.0 74 243-317 2-83 (310)
387 PLN00198 anthocyanidin reducta 93.5 0.2 4.3E-06 49.0 6.8 36 238-273 5-40 (338)
388 PLN02896 cinnamyl-alcohol dehy 93.5 0.14 3E-06 50.6 5.7 60 237-296 5-90 (353)
389 cd00704 MDH Malate dehydrogena 93.4 0.18 3.9E-06 50.4 6.5 54 244-297 2-88 (323)
390 TIGR03376 glycerol3P_DH glycer 93.4 0.13 2.8E-06 51.9 5.5 69 244-313 1-115 (342)
391 PRK15182 Vi polysaccharide bio 93.4 0.16 3.6E-06 52.6 6.4 74 243-318 7-124 (425)
392 smart00859 Semialdhyde_dh Semi 93.4 0.2 4.4E-06 42.2 5.8 74 244-317 1-102 (122)
393 PRK06139 short chain dehydroge 93.4 0.067 1.4E-06 53.2 3.3 38 239-276 4-41 (330)
394 PRK08217 fabG 3-ketoacyl-(acyl 93.3 0.082 1.8E-06 48.5 3.7 37 239-275 2-38 (253)
395 PRK06114 short chain dehydroge 93.3 0.13 2.9E-06 47.9 5.1 39 238-276 4-42 (254)
396 PRK12742 oxidoreductase; Provi 93.3 0.13 2.8E-06 47.1 4.9 36 239-274 3-38 (237)
397 PLN02695 GDP-D-mannose-3',5'-e 93.3 0.15 3.2E-06 51.3 5.6 55 241-295 20-95 (370)
398 PRK10727 DNA-binding transcrip 93.3 4.2 9.2E-05 39.5 15.7 88 85-179 20-122 (343)
399 PRK05557 fabG 3-ketoacyl-(acyl 93.2 0.15 3.2E-06 46.5 5.1 37 239-275 2-38 (248)
400 PRK04308 murD UDP-N-acetylmura 93.2 0.22 4.8E-06 51.2 6.9 121 240-368 3-135 (445)
401 TIGR01202 bchC 2-desacetyl-2-h 93.2 0.23 4.9E-06 48.4 6.7 76 240-316 143-233 (308)
402 cd00300 LDH_like L-lactate deh 93.2 0.18 3.9E-06 49.7 6.0 51 245-297 1-78 (300)
403 PRK07326 short chain dehydroge 93.2 0.095 2.1E-06 47.9 3.8 36 240-275 4-39 (237)
404 COG2910 Putative NADH-flavin r 93.2 0.2 4.3E-06 47.1 5.8 54 243-296 1-73 (211)
405 PLN02657 3,8-divinyl protochlo 93.1 0.17 3.7E-06 51.4 5.9 39 237-275 55-93 (390)
406 cd08293 PTGR2 Prostaglandin re 93.1 0.23 5E-06 48.3 6.6 74 242-315 155-255 (345)
407 PRK07533 enoyl-(acyl carrier p 93.1 0.15 3.2E-06 48.1 5.1 37 238-275 6-45 (258)
408 PF04127 DFP: DNA / pantothena 93.1 0.16 3.5E-06 47.0 5.2 78 240-317 1-121 (185)
409 PRK06198 short chain dehydroge 93.1 0.12 2.6E-06 48.1 4.4 38 239-276 3-41 (260)
410 TIGR03206 benzo_BadH 2-hydroxy 93.1 0.12 2.6E-06 47.6 4.4 36 240-275 1-36 (250)
411 PLN02778 3,5-epimerase/4-reduc 93.1 0.27 5.8E-06 47.9 7.0 54 242-295 9-67 (298)
412 PRK06181 short chain dehydroge 93.0 0.16 3.5E-06 47.4 5.2 34 242-275 1-34 (263)
413 PRK12823 benD 1,6-dihydroxycyc 93.0 0.15 3.3E-06 47.5 5.0 37 239-275 5-41 (260)
414 PRK08644 thiamine biosynthesis 93.0 0.16 3.5E-06 47.7 5.1 36 238-274 24-60 (212)
415 PRK06505 enoyl-(acyl carrier p 93.0 0.14 3.1E-06 48.9 4.9 36 240-275 5-42 (271)
416 PRK08594 enoyl-(acyl carrier p 93.0 0.19 4.1E-06 47.5 5.6 36 239-274 4-41 (257)
417 PRK05875 short chain dehydroge 93.0 0.13 2.9E-06 48.4 4.6 37 239-275 4-40 (276)
418 PF00899 ThiF: ThiF family; I 93.0 0.096 2.1E-06 45.1 3.3 32 242-274 2-34 (135)
419 PRK12921 2-dehydropantoate 2-r 93.0 0.23 5.1E-06 47.9 6.3 69 244-313 2-101 (305)
420 PLN02214 cinnamoyl-CoA reducta 92.9 0.24 5.2E-06 49.0 6.5 35 240-274 8-42 (342)
421 PF05368 NmrA: NmrA-like famil 92.9 0.17 3.6E-06 46.9 5.1 52 245-296 1-75 (233)
422 PRK08040 putative semialdehyde 92.9 0.11 2.3E-06 52.5 4.0 77 241-317 3-100 (336)
423 PRK08762 molybdopterin biosynt 92.9 0.15 3.1E-06 51.9 4.9 35 239-274 132-167 (376)
424 cd08239 THR_DH_like L-threonin 92.9 0.4 8.7E-06 46.6 7.9 92 223-316 146-264 (339)
425 PLN03209 translocon at the inn 92.9 0.17 3.6E-06 54.6 5.6 36 240-275 78-113 (576)
426 PRK06197 short chain dehydroge 92.8 0.091 2E-06 50.7 3.3 37 239-275 13-49 (306)
427 COG0334 GdhA Glutamate dehydro 92.8 0.39 8.5E-06 49.7 7.9 52 221-273 182-237 (411)
428 PF03435 Saccharop_dh: Sacchar 92.8 0.12 2.6E-06 52.0 4.3 111 245-369 1-141 (386)
429 PRK11880 pyrroline-5-carboxyla 92.8 0.23 5E-06 47.3 5.9 52 243-295 3-72 (267)
430 PRK12827 short chain dehydroge 92.8 0.18 3.9E-06 46.2 5.0 36 239-274 3-38 (249)
431 PRK08226 short chain dehydroge 92.8 0.17 3.8E-06 47.1 5.0 37 239-275 3-39 (263)
432 PRK05086 malate dehydrogenase; 92.8 0.3 6.6E-06 48.5 6.9 55 243-297 1-81 (312)
433 PLN02383 aspartate semialdehyd 92.7 0.16 3.5E-06 51.3 5.1 77 241-317 6-103 (344)
434 cd08253 zeta_crystallin Zeta-c 92.7 0.54 1.2E-05 44.1 8.3 94 223-316 126-245 (325)
435 PRK08263 short chain dehydroge 92.7 0.21 4.6E-06 47.2 5.6 35 241-275 2-36 (275)
436 PRK08643 acetoin reductase; Va 92.7 0.16 3.6E-06 47.1 4.7 34 242-275 2-35 (256)
437 PLN00106 malate dehydrogenase 92.7 0.37 7.9E-06 48.4 7.4 56 241-297 17-98 (323)
438 PRK07792 fabG 3-ketoacyl-(acyl 92.7 0.18 4E-06 49.0 5.2 39 237-275 7-45 (306)
439 cd01339 LDH-like_MDH L-lactate 92.7 0.24 5.1E-06 48.6 6.0 51 245-297 1-78 (300)
440 PRK07201 short chain dehydroge 92.6 0.17 3.7E-06 54.0 5.4 37 239-275 368-404 (657)
441 PLN02730 enoyl-[acyl-carrier-p 92.6 0.19 4.2E-06 49.7 5.3 35 237-272 4-41 (303)
442 cd05290 LDH_3 A subgroup of L- 92.6 0.21 4.5E-06 49.7 5.5 53 244-297 1-80 (307)
443 PRK08278 short chain dehydroge 92.6 0.18 4E-06 47.9 5.0 37 239-275 3-39 (273)
444 PRK06444 prephenate dehydrogen 92.6 0.22 4.8E-06 46.6 5.4 58 244-315 2-60 (197)
445 PRK06914 short chain dehydroge 92.6 0.17 3.8E-06 47.7 4.8 35 241-275 2-36 (280)
446 PRK05600 thiamine biosynthesis 92.5 0.19 4.1E-06 51.3 5.2 35 238-273 37-72 (370)
447 TIGR03026 NDP-sugDHase nucleot 92.5 0.37 7.9E-06 49.3 7.3 84 230-313 301-409 (411)
448 PRK09135 pteridine reductase; 92.5 0.2 4.3E-06 45.9 4.9 36 240-275 4-39 (249)
449 PRK05993 short chain dehydroge 92.4 0.16 3.5E-06 48.3 4.4 35 241-275 3-37 (277)
450 PRK06113 7-alpha-hydroxysteroi 92.4 0.18 4E-06 47.0 4.7 37 239-275 8-44 (255)
451 PRK07677 short chain dehydroge 92.4 0.18 3.8E-06 47.0 4.5 34 242-275 1-34 (252)
452 COG0300 DltE Short-chain dehyd 92.4 0.24 5.1E-06 48.6 5.5 37 239-275 3-39 (265)
453 PRK00683 murD UDP-N-acetylmura 92.4 0.32 7E-06 49.7 6.8 105 241-368 2-127 (418)
454 TIGR02279 PaaC-3OHAcCoADH 3-hy 92.4 0.18 3.9E-06 53.4 5.0 32 243-275 6-37 (503)
455 cd05294 LDH-like_MDH_nadp A la 92.3 0.35 7.6E-06 47.9 6.8 54 243-297 1-84 (309)
456 PRK08268 3-hydroxy-acyl-CoA de 92.3 0.19 4.1E-06 53.3 5.1 71 243-315 8-124 (507)
457 PRK08642 fabG 3-ketoacyl-(acyl 92.3 0.23 4.9E-06 45.8 5.1 36 239-274 2-37 (253)
458 PRK05597 molybdopterin biosynt 92.3 0.21 4.6E-06 50.5 5.2 35 238-273 24-59 (355)
459 PRK07806 short chain dehydroge 92.3 0.23 5E-06 45.8 5.1 36 240-275 4-39 (248)
460 PRK08945 putative oxoacyl-(acy 92.3 0.13 2.8E-06 47.7 3.4 37 239-275 9-45 (247)
461 cd08281 liver_ADH_like1 Zinc-d 92.3 0.36 7.9E-06 48.0 6.9 75 241-316 191-292 (371)
462 COG2072 TrkA Predicted flavopr 92.3 0.18 3.9E-06 52.5 4.8 37 238-275 171-207 (443)
463 PRK11303 DNA-binding transcrip 92.3 3 6.6E-05 40.0 13.1 93 85-180 19-125 (328)
464 PRK07109 short chain dehydroge 92.3 0.13 2.7E-06 51.1 3.5 37 239-275 5-41 (334)
465 PRK07577 short chain dehydroge 92.2 0.25 5.5E-06 45.0 5.2 35 241-275 2-36 (234)
466 PRK10538 malonic semialdehyde 92.2 0.24 5.2E-06 46.1 5.2 33 243-275 1-33 (248)
467 COG0604 Qor NADPH:quinone redu 92.2 0.34 7.4E-06 48.3 6.5 93 223-316 124-243 (326)
468 TIGR03466 HpnA hopanoid-associ 92.1 0.25 5.5E-06 47.2 5.4 53 243-295 1-74 (328)
469 TIGR03451 mycoS_dep_FDH mycoth 92.1 0.36 7.8E-06 47.8 6.6 76 240-316 175-278 (358)
470 PRK07984 enoyl-(acyl carrier p 92.1 0.19 4.1E-06 48.0 4.4 36 240-275 4-41 (262)
471 COG0059 IlvC Ketol-acid reduct 92.1 0.27 5.9E-06 49.2 5.5 79 240-319 16-115 (338)
472 PRK07985 oxidoreductase; Provi 92.0 0.24 5.1E-06 48.0 5.1 36 239-274 46-81 (294)
473 TIGR01777 yfcH conserved hypot 92.0 0.34 7.3E-06 45.6 6.0 52 245-296 1-68 (292)
474 PRK06701 short chain dehydroge 92.0 0.24 5.1E-06 47.9 5.0 38 238-275 42-79 (290)
475 PF00070 Pyr_redox: Pyridine n 92.0 0.26 5.6E-06 38.5 4.3 32 244-276 1-32 (80)
476 PRK08267 short chain dehydroge 91.9 0.19 4.1E-06 46.9 4.1 33 243-275 2-34 (260)
477 PRK12744 short chain dehydroge 91.9 0.21 4.5E-06 46.6 4.4 35 239-273 5-39 (257)
478 PRK09620 hypothetical protein; 91.9 0.4 8.7E-06 45.7 6.4 59 240-298 1-100 (229)
479 PRK11863 N-acetyl-gamma-glutam 91.9 0.18 3.8E-06 50.6 4.1 76 243-318 3-85 (313)
480 PRK07831 short chain dehydroge 91.9 0.25 5.3E-06 46.3 4.9 37 239-275 14-51 (262)
481 cd01338 MDH_choloroplast_like 91.9 0.38 8.3E-06 48.1 6.5 55 243-297 3-90 (322)
482 PLN02206 UDP-glucuronate decar 91.9 0.36 7.7E-06 50.2 6.4 58 237-294 114-192 (442)
483 PRK08303 short chain dehydroge 91.9 0.24 5.2E-06 48.5 4.9 37 239-275 5-41 (305)
484 PRK06720 hypothetical protein; 91.8 0.21 4.5E-06 45.2 4.1 41 238-278 12-52 (169)
485 PLN02819 lysine-ketoglutarate 91.8 0.23 5E-06 57.0 5.4 39 279-317 291-341 (1042)
486 cd05282 ETR_like 2-enoyl thioe 91.8 0.59 1.3E-05 44.5 7.4 93 224-316 121-239 (323)
487 PRK12746 short chain dehydroge 91.7 0.21 4.5E-06 46.3 4.1 34 239-272 3-36 (254)
488 PRK06128 oxidoreductase; Provi 91.7 0.27 5.9E-06 47.4 5.0 36 239-274 52-87 (300)
489 PLN02653 GDP-mannose 4,6-dehyd 91.6 0.31 6.7E-06 47.7 5.4 36 239-274 3-38 (340)
490 PRK07791 short chain dehydroge 91.6 0.22 4.8E-06 47.9 4.3 35 240-274 4-38 (286)
491 PTZ00345 glycerol-3-phosphate 91.5 0.37 8E-06 49.2 5.9 72 242-314 11-129 (365)
492 PRK08324 short chain dehydroge 91.5 0.29 6.4E-06 53.4 5.6 37 239-275 419-455 (681)
493 PRK12769 putative oxidoreducta 91.5 0.44 9.5E-06 51.8 6.9 33 241-274 326-358 (654)
494 PLN02260 probable rhamnose bio 91.5 1.5 3.3E-05 47.5 10.9 55 241-295 379-438 (668)
495 PRK06483 dihydromonapterin red 91.5 0.26 5.7E-06 45.3 4.5 35 242-276 2-36 (236)
496 PRK05855 short chain dehydroge 91.4 0.27 5.8E-06 51.0 4.9 38 238-275 311-348 (582)
497 PRK08177 short chain dehydroge 91.4 0.35 7.7E-06 44.2 5.3 34 243-276 2-35 (225)
498 PRK10423 transcriptional repre 91.4 3.2 7E-05 39.7 12.1 88 85-179 17-119 (327)
499 PRK05442 malate dehydrogenase; 91.4 0.45 9.7E-06 47.8 6.3 54 243-296 5-91 (326)
500 PRK07453 protochlorophyllide o 91.3 0.2 4.3E-06 48.8 3.7 37 239-275 3-39 (322)
No 1
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=100.00 E-value=1.3e-104 Score=785.87 Aligned_cols=363 Identities=81% Similarity=1.197 Sum_probs=332.1
Q ss_pred cceeeeccccccccceeccccccccCCCccccccccccccCCCCCCcccccceeeecCCCCCCCcccccccccccccccc
Q 017184 5 RSMIFADCSSSTTARLVPFGRSRLLCGGGALCARRRLHVGVGPSLPASLRTTLTVHSSPSPSLPVMNVSCSATMASEASA 84 (375)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~a 84 (375)
+|++|+|||||+++||+||+|..+ ||+|++..|+.. +...++.+...+.|.+.+++. ..+.+. ..+++||.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~ 73 (364)
T PLN02616 2 ASLMFTDCSSSTTSRLIHFNRIST-PFNGTFLLRRCV--GPLRVRTTASGRGCCINSSSS-PSPVIN----ADTGSEGGA 73 (364)
T ss_pred chhhhccccccchhhhhHHhhccc-ccccccccceec--cccccCccccccccccCCCCC-cchhhh----hhcCccccC
Confidence 679999999999999999999865 899999998732 333344444456777766655 222333 337778778
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017184 85 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 164 (375)
Q Consensus 85 ~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I 164 (375)
++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 74 ~ildGk~iA~~i~~~lk~~v~~lk~~~g~~P~LaiIlvG~dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I 153 (364)
T PLN02616 74 KVIDGKAVAKKIRDEITIEVSRMKESIGVVPGLAVILVGDRKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFI 153 (364)
T ss_pred eEeEhHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 89999999999999999999999988889999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017184 165 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 244 (375)
Q Consensus 165 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~ 244 (375)
++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|++.++|+||||+||+++|++|+++++||+
T Consensus 154 ~~LN~D~~V~GIlVQlPLP~~id~~~i~~aI~P~KDVDGl~p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l~GK~ 233 (364)
T PLN02616 154 SGFNNDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKR 233 (364)
T ss_pred HHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence 99999999999999999999999999999999999999999999999998654678999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCCC
Q 017184 245 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 324 (375)
Q Consensus 245 vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~~ 324 (375)
|+|||||++||||+++||+++|||||+||++|+|+++++++|||||+|+|+|++|+++|||||++|||+|+|++++++++
T Consensus 234 vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~~r~ADIVIsAvGkp~~i~~d~vK~GAvVIDVGIn~~~~~~~~ 313 (364)
T PLN02616 234 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITREADIIISAVGQPNMVRGSWIKPGAVVIDVGINPVEDASSP 313 (364)
T ss_pred EEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHHHHhhCCEEEEcCCCcCcCCHHHcCCCCEEEecccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997654444
Q ss_pred CCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhccC
Q 017184 325 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 375 (375)
Q Consensus 325 ~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~~ 375 (375)
+|+|++|||||+++.++|++||||||||||||++|||+|++++++++.+|+
T Consensus 314 ~g~klvGDVdfe~v~~~as~ITPVPGGVGpmTva~Ll~N~~~aa~~~~~~~ 364 (364)
T PLN02616 314 RGYRLVGDVCYEEACKVASAVTPVPGGVGPMTIAMLLSNTLTSAKRIHNFQ 364 (364)
T ss_pred CCCeEEecCcHHHHHhhccccCCCCCchHHHHHHHHHHHHHHHHHHhhcCC
Confidence 566899999999999999999999999999999999999999999998874
No 2
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=100.00 E-value=2.5e-100 Score=752.35 Aligned_cols=344 Identities=59% Similarity=0.948 Sum_probs=309.0
Q ss_pred cceeeeccccccccceeccccccccCCCccccccccccccCCCCCCcccccceeeecCCCCCCCcccccccccccccccc
Q 017184 5 RSMIFADCSSSTTARLVPFGRSRLLCGGGALCARRRLHVGVGPSLPASLRTTLTVHSSPSPSLPVMNVSCSATMASEASA 84 (375)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~a 84 (375)
+|++|+||||++|+||++|+|....| |+ .+.-.|..|+ +.+ .....+..++|+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~---~~~~~~~~~~-~~~------------~~~~~~~~~~~~~~ 56 (345)
T PLN02897 2 LASAHTKAFRLATRDVHCFSSILVSP---------PL---VSLDLPENWI-PYS------------DPPPPVSFETEQKT 56 (345)
T ss_pred chhhhhhccccchhhhhhhhhhhcCC---------cc---cccccccCCC-ccc------------cccccccccccccc
Confidence 67999999999999999998775533 12 1111122221 111 11111224555667
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017184 85 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 164 (375)
Q Consensus 85 ~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I 164 (375)
++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|
T Consensus 57 ~ildGk~vA~~i~~~lk~~v~~l~~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI~~~~~~l~~~~te~ell~~I 136 (345)
T PLN02897 57 VVIDGNVIAEEIRTKIASEVRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKSLLAELPEDCTEGQILSAL 136 (345)
T ss_pred eEeehHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCCEEEEEECCCCCCHHHHHHHH
Confidence 89999999999999999999999988789999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017184 165 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 244 (375)
Q Consensus 165 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~ 244 (375)
++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|++|+++++|+||||.||+++|++|+++++||+
T Consensus 137 ~~lN~D~~V~GIlVQlPLP~hid~~~i~~~I~p~KDVDGl~p~N~G~L~~~~~~~~~~PCTp~avi~LL~~~~i~l~GK~ 216 (345)
T PLN02897 137 RKFNEDTSIHGILVQLPLPQHLDESKILNMVRLEKDVDGFHPLNVGNLAMRGREPLFVSCTPKGCVELLIRSGVEIAGKN 216 (345)
T ss_pred HHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCccCCCHHHHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCE
Confidence 99999999999999999999999999999999999999999999999988654578999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCCC
Q 017184 245 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 324 (375)
Q Consensus 245 vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~~ 324 (375)
|+|||||++||+|+++||+++|||||+||++|+|+++++++|||||+|+|+|++|+++|||+|++|||||+|+.+++++.
T Consensus 217 vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~~~ADIvIsAvGkp~~v~~d~vk~GavVIDVGin~~~~~~~~ 296 (345)
T PLN02897 217 AVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQITRKADIVIAAAGIPNLVRGSWLKPGAVVIDVGTTPVEDSSCE 296 (345)
T ss_pred EEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEcccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997554444
Q ss_pred CCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017184 325 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 373 (375)
Q Consensus 325 ~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 373 (375)
.|+|++|||||+++.++|++||||||||||||++|||+|+++++++|++
T Consensus 297 ~g~klvGDVdfe~v~~~as~iTPVPGGVGpmTvamLm~N~~~a~~~~~~ 345 (345)
T PLN02897 297 FGYRLVGDVCYEEALGVASAITPVPGGVGPMTITMLLCNTLDAAKRIFL 345 (345)
T ss_pred CCCeeEecccHHHHHhhccccCCCCCchhHHHHHHHHHHHHHHHHHhcC
Confidence 4668999999999999999999999999999999999999999999864
No 3
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=100.00 E-value=9.8e-93 Score=680.79 Aligned_cols=282 Identities=57% Similarity=0.921 Sum_probs=274.4
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017184 85 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 164 (375)
Q Consensus 85 ~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I 164 (375)
++||||++|+++++++++++++++++.++.|+|++|+|||||+|+.|+++|.|+|+++||.++.++||++++++||++.|
T Consensus 1 ~~idGk~lA~~i~~~lk~~v~~~~~~~~~~P~LavilvgddpaS~~YV~~K~k~~~~iGi~~~~~~l~~~~t~~eLl~~I 80 (283)
T COG0190 1 MIIDGKALAEKIREELKEKVEALKAKGGFKPGLAVILVGDDPASQVYVRSKKKAAEEIGIASELYDLPEDITEEELLALI 80 (283)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeeEEEeCCCcCCHHHHHHHH
Confidence 37999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017184 165 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 244 (375)
Q Consensus 165 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~ 244 (375)
++||+|++||||+||+|||+|+|+++++++|+|+||||||||+|.|+|..+ ++.|+||||.|++++|++|+++++||+
T Consensus 81 ~~lN~D~~v~GIlVQlPLp~hld~~~il~~I~p~KDVDG~hp~N~g~L~~~--~~~~~PCTp~gi~~ll~~~~i~l~Gk~ 158 (283)
T COG0190 81 DELNADPEVDGILVQLPLPKHLDEQKLLQAIDPEKDVDGFHPYNLGKLAQG--EPGFLPCTPAGIMTLLEEYGIDLRGKN 158 (283)
T ss_pred HHhcCCCCCcEEEEeCCCCCCCCHHHHHhhcCcCCCccccChhHhcchhcC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999976 788999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCCC
Q 017184 245 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 324 (375)
Q Consensus 245 vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~~ 324 (375)
|+|||||++||||++.+|++.|||||+||++|+|+.+++++|||||+|+|+|+++++||||||++|||||+|++++
T Consensus 159 ~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~~~k~ADIvv~AvG~p~~i~~d~vk~gavVIDVGinrv~~---- 234 (283)
T COG0190 159 VVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLASITKNADIVVVAVGKPHFIKADMVKPGAVVIDVGINRVND---- 234 (283)
T ss_pred EEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHHHhhhCCEEEEecCCccccccccccCCCEEEecCCccccC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred CCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcc
Q 017184 325 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 374 (375)
Q Consensus 325 ~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 374 (375)
+|++|||||+++.++|++||||||||||||++|||+|++++++++.+.
T Consensus 235 --~kl~GDVdf~~v~~~a~~iTPVPGGVGPmTvamLl~Nt~~a~~~~~~~ 282 (283)
T COG0190 235 --GKLVGDVDFDSVKEKASAITPVPGGVGPMTVAMLLENTLKAAERQRGE 282 (283)
T ss_pred --CceEeeccHHHHHHhhcccCCCCCccCHHHHHHHHHHHHHHHHHHhcc
Confidence 289999999999999999999999999999999999999999987653
No 4
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.1e-91 Score=679.17 Aligned_cols=282 Identities=43% Similarity=0.757 Sum_probs=272.8
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017184 84 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 163 (375)
Q Consensus 84 a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~ 163 (375)
+++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|.|+++||+++.++||++++|+||++.
T Consensus 2 ~~il~Gk~iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~ 81 (288)
T PRK14171 2 NNIIDGKALANEILADLKLEIQELKSQTNASPKLAIVLVGDNPASIIYVKNKIKNAHKIGIDTLLVNLSTTIHTNDLISK 81 (288)
T ss_pred CeEeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 57999999999999999999999998878999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017184 164 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 243 (375)
Q Consensus 164 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK 243 (375)
|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|. .++|+||||+||+++|++|+++++||
T Consensus 82 I~~LN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~g~-~~~~~PcTp~av~~lL~~y~i~l~GK 160 (288)
T PRK14171 82 INELNLDNEISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFHPLNVGYLHSGI-SQGFIPCTALGCLAVIKKYEPNLTGK 160 (288)
T ss_pred HHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccccCCccchhhhhcCC-CCCCcCCCHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999763 37899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 323 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~ 323 (375)
+|+|||||++||+|+++||+++|||||+||++|+||++++++|||||+|+|+|++|+++|||+|++|||+|+|+..+
T Consensus 161 ~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~~~~ADIvV~AvGkp~~i~~~~vk~GavVIDvGin~~~~--- 237 (288)
T PRK14171 161 NVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSITSKADIVVAAIGSPLKLTAEYFNPESIVIDVGINRISG--- 237 (288)
T ss_pred EEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCCCccCHHHcCCCCEEEEeeccccCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999743
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017184 324 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 372 (375)
Q Consensus 324 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 372 (375)
| |++|||||+++.++|++||||||||||||++|||+|+++++++.+
T Consensus 238 --g-kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~v~a~~~~~ 283 (288)
T PRK14171 238 --N-KIIGDVDFENVKSKVKYITPVPGGIGPMTIAFLLKNTVKAFKDSL 283 (288)
T ss_pred --C-CeECCccHHHHHhhceEeCCCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 2 899999999999999999999999999999999999999998654
No 5
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.4e-91 Score=677.31 Aligned_cols=282 Identities=51% Similarity=0.895 Sum_probs=274.0
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017184 84 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 163 (375)
Q Consensus 84 a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~ 163 (375)
+++||||++|++|++++++++++|+++ |++|+|++|+||+|++|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~il~Gk~iA~~i~~~ik~~i~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~ 80 (284)
T PRK14170 2 GEIIDGKKLAKEIQEKVTREVAELVKE-GKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSV 80 (284)
T ss_pred CeEEEhHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 579999999999999999999999877 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017184 164 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 243 (375)
Q Consensus 164 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK 243 (375)
|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++||
T Consensus 81 I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~p~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk 158 (284)
T PRK14170 81 VEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFIG--KDSFVPCTPAGIIELIKSTGTQIEGK 158 (284)
T ss_pred HHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcccCChhhhhHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 56899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 323 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~ 323 (375)
+|+|||||++||+|+++||+++|||||+||++|+|+++++++|||||+|+|+|++|+++|||+|++|||+|+|+.++
T Consensus 159 ~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG~~~~i~~~~vk~GavVIDvGin~~~~--- 235 (284)
T PRK14170 159 RAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMDRDEN--- 235 (284)
T ss_pred EEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCcccCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999644
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcc
Q 017184 324 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 374 (375)
Q Consensus 324 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 374 (375)
| |++|||||+++.++|+++|||||||||||++|||+|+++++++++.+
T Consensus 236 --g-kl~GDvdfe~~~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~~ 283 (284)
T PRK14170 236 --N-KLCGDVDFDDVVEEAGFITPVPGGVGPMTITMLLANTLKAAKRIWKM 283 (284)
T ss_pred --C-CeecccchHHHHhhccEecCCCCChHHHHHHHHHHHHHHHHHHHhhc
Confidence 2 89999999999999999999999999999999999999999998765
No 6
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.8e-91 Score=679.08 Aligned_cols=285 Identities=48% Similarity=0.813 Sum_probs=274.0
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017184 85 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 164 (375)
Q Consensus 85 ~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I 164 (375)
++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I 81 (293)
T PRK14185 2 QLIDGKAISAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKV 81 (293)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 58999999999999999999999988789999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017184 165 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 244 (375)
Q Consensus 165 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~ 244 (375)
++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+|+.| .++|+||||+||+++|++|+++++||+
T Consensus 82 ~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~GK~ 159 (293)
T PRK14185 82 RELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGFHPINVGRMSIG--LPCFVSATPNGILELLKRYHIETSGKK 159 (293)
T ss_pred HHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcCCCCHhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999976 578999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHHhhC----CCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCC
Q 017184 245 AVVIGRSNIVGMPAALLLQRE----DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVED 320 (375)
Q Consensus 245 vvVIGrs~~VGkpla~lL~~~----gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~ 320 (375)
|+|||||++||+|+++||+++ |||||+||++|+||.+++++|||||+|+|+|++|+++|||+|++|||+|+|+.++
T Consensus 160 vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~nl~~~~~~ADIvIsAvGkp~~i~~~~vk~gavVIDvGin~~~~ 239 (293)
T PRK14185 160 CVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSKNLKKECLEADIIIAALGQPEFVKADMVKEGAVVIDVGTTRVPD 239 (293)
T ss_pred EEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecCccccc
Confidence 999999999999999999998 7999999999999999999999999999999999999999999999999999755
Q ss_pred CCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHH
Q 017184 321 AKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRV 371 (375)
Q Consensus 321 ~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~ 371 (375)
+++..|+|++|||||+++.++|++||||||||||||++|||+|+++++++.
T Consensus 240 ~~~~~g~klvGDVdf~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~ 290 (293)
T PRK14185 240 ATRKSGFKLTGDVKFDEVAPKCSYITPVPGGVGPMTIVSLMKNTLLAGKKA 290 (293)
T ss_pred ccccCCCeeEcCCCHHHHHhhccEeCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 333345589999999999999999999999999999999999999999764
No 7
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=100.00 E-value=3e-91 Score=679.16 Aligned_cols=290 Identities=64% Similarity=1.080 Sum_probs=278.0
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017184 84 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 163 (375)
Q Consensus 84 a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~ 163 (375)
+++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++++|+++.
T Consensus 9 ~~ildGk~vA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~ 88 (299)
T PLN02516 9 AQIIDGKAIAKAIRSEIAEEVAQLSEKHGKVPGLAVVIVGSRKDSQTYVNMKRKACAEVGIKSFDVDLPENISEAELISK 88 (299)
T ss_pred CeEeehHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEECCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 57999999999999999999999998879999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017184 164 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 243 (375)
Q Consensus 164 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK 243 (375)
|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.++..++|+||||+||+++|++|+++++||
T Consensus 89 I~~lN~D~~V~GIlvq~PlP~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk 168 (299)
T PLN02516 89 VHELNANPDVHGILVQLPLPKHINEEKILNEISLEKDVDGFHPLNIGKLAMKGREPLFLPCTPKGCLELLSRSGIPIKGK 168 (299)
T ss_pred HHHHhCCCCCCeEEEecCCCCCcCHHHHHhccCcccccCccCHhhHhhHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999764457899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 323 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~ 323 (375)
+|+|||||++||||+++||+++|||||+||++|+|+++++++|||||+|+|+|++|+++|||+|++|||+|+|+.+++..
T Consensus 169 ~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~~~~~ADIvv~AvGk~~~i~~~~vk~gavVIDvGin~~~~~~~ 248 (299)
T PLN02516 169 KAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPESIVREADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNAVSDPSK 248 (299)
T ss_pred EEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEeeccccCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999754333
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017184 324 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 373 (375)
Q Consensus 324 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 373 (375)
..|.|++|||||+++.++|+++|||||||||||++|||+|+++++++|+.
T Consensus 249 ~~g~kl~GDvd~e~v~~~a~~iTPVPGGVGp~T~a~L~~N~v~a~~~~~~ 298 (299)
T PLN02516 249 KSGYRLVGDVDFAEVSKVAGWITPVPGGVGPMTVAMLLKNTVDGAKRVFA 298 (299)
T ss_pred cCCCceEcCcChHHhhhhceEecCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence 33558999999999999999999999999999999999999999999975
No 8
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=3e-91 Score=679.06 Aligned_cols=293 Identities=50% Similarity=0.822 Sum_probs=277.1
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017184 82 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 161 (375)
Q Consensus 82 m~a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~ 161 (375)
|.+++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|++
T Consensus 1 m~~~ildGk~iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~ 80 (297)
T PRK14168 1 MSAKIIKGTEIREEILEEIRGEVAELKEKYGKVPGLVTILVGESPASLSYVTLKIKTAHRLGFHEIQDNQSVDITEEELL 80 (297)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 34679999999999999999999999988789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017184 162 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 241 (375)
Q Consensus 162 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~ 241 (375)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|+..++|+||||.||+++|++|+++++
T Consensus 81 ~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~ 160 (297)
T PRK14168 81 ALIDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDPDKDVDGFHPVNVGRLMIGGDEVKFLPCTPAGIQEMLVRSGVETS 160 (297)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccChhhHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999999999999999999998754478999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhC----CCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecC
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQRE----DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINP 317 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~----gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~ 317 (375)
||+|+|||||++||+|+++||+++ |||||+||++|+|+++++++|||||+|+|+|++|+++|||+|++|||+|+|+
T Consensus 161 Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T~~l~~~~~~ADIvVsAvGkp~~i~~~~ik~gavVIDvGin~ 240 (297)
T PRK14168 161 GAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRSKNLARHCQRADILIVAAGVPNLVKPEWIKPGATVIDVGVNR 240 (297)
T ss_pred CCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCCcCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEecCCCc
Confidence 999999999999999999999998 8999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcc
Q 017184 318 VEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 374 (375)
Q Consensus 318 ~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 374 (375)
+.+..+.++++++|||||+++.++|++||||||||||||++|||+|+++++++|++.
T Consensus 241 ~~~~~~~g~~~~~GDVdfe~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~~ 297 (297)
T PRK14168 241 VGTNESTGKAILSGDVDFDAVKEIAGKITPVPGGVGPMTIAMLMRNTLKSAKFHLSL 297 (297)
T ss_pred cCccccCCCcceeccccHHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHhCC
Confidence 632111112249999999999999999999999999999999999999999999863
No 9
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=6.8e-91 Score=672.34 Aligned_cols=280 Identities=48% Similarity=0.813 Sum_probs=271.8
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017184 84 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 163 (375)
Q Consensus 84 a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~ 163 (375)
+++||||++|++|++++++++++|+++ |++|+|++|+||+|++|..|+++|.|+|+++||+++.++||++++|+||++.
T Consensus 1 ~~il~Gk~va~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~ 79 (282)
T PRK14169 1 ATRLDGRAVSKKILADLKQTVAKLAQQ-DVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAK 79 (282)
T ss_pred CeeeehHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 468999999999999999999999877 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017184 164 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 243 (375)
Q Consensus 164 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK 243 (375)
|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.+ .++|+||||+||+++|++|+++++||
T Consensus 80 I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk 157 (282)
T PRK14169 80 VAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWAN--EPTVVASTPYGIMALLDAYDIDVAGK 157 (282)
T ss_pred HHHHhCCCCCCEEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcC--CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 57899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 323 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~ 323 (375)
+|+|||||++||+|+++||+++|||||+||++|+||++++++|||||+|+|+|++|++||||+|++|||+|+|+..+
T Consensus 158 ~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG~p~~i~~~~vk~GavVIDvGin~~~~--- 234 (282)
T PRK14169 158 RVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVAVGVPHFIGADAVKPGAVVIDVGISRGAD--- 234 (282)
T ss_pred EEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCcEEEEeeccccCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999644
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017184 324 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 372 (375)
Q Consensus 324 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 372 (375)
| |++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus 235 --g-kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 280 (282)
T PRK14169 235 --G-KLLGDVDEAAVAPIASAITPVPGGVGPMTIASLMAQTVTLAKRRA 280 (282)
T ss_pred --C-CeeecCcHHHHHhhccEecCCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 2 899999999999999999999999999999999999999998754
No 10
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=8.5e-91 Score=674.65 Aligned_cols=286 Identities=48% Similarity=0.784 Sum_probs=273.8
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017184 84 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 163 (375)
Q Consensus 84 a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~ 163 (375)
+++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~ildGk~va~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~~ 81 (294)
T PRK14187 2 TNIIDGKKIANDITEILATCIDDLKRQHNLFPCLIVILVGDDPASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIEK 81 (294)
T ss_pred cEEeehHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 47899999999999999999999988778999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017184 164 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 243 (375)
Q Consensus 164 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK 243 (375)
|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+|+.|+..++|+||||+||+++|++|+++++||
T Consensus 82 I~~lN~d~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~~~PcTp~avi~lL~~~~i~l~Gk 161 (294)
T PRK14187 82 INELNNDDSVHGILVQLPVPNHIDKNLIINTIDPEKDVDGFHNENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSGS 161 (294)
T ss_pred HHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCCCCCCCccCcCHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999875346899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 323 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~ 323 (375)
+|+|||||++||+|+++||+++|||||+||++|+|+++++++|||||+|+|+|++|+++|||+|++|||+|+|+.+++.
T Consensus 162 ~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~~ADIvVsAvGkp~~i~~~~ik~gaiVIDVGin~~~~~~- 240 (294)
T PRK14187 162 DAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADYCSKADILVAAVGIPNFVKYSWIKKGAIVIDVGINSIEEGG- 240 (294)
T ss_pred EEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccccCCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999964321
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017184 324 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 372 (375)
Q Consensus 324 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 372 (375)
..|++|||||+++.++|+++|||||||||||++|||+|+++++++..
T Consensus 241 --~~kl~GDvd~e~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 287 (294)
T PRK14187 241 --VKKFVGDVDFAEVKKKASAITPVPGGVGPMTIAFLMVNTVIAACNQK 287 (294)
T ss_pred --ccceeCCccHHHHhhhccEecCCCCCChHHHHHHHHHHHHHHHHHhh
Confidence 12799999999999999999999999999999999999999998754
No 11
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=9.5e-91 Score=671.31 Aligned_cols=280 Identities=51% Similarity=0.820 Sum_probs=270.8
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017184 85 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 164 (375)
Q Consensus 85 ~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I 164 (375)
++||||++|++|++++++++++|+++ |++|+|++|+||+||+|..|+++|.|.|+++||+++.++||++++|+|+++.|
T Consensus 2 ~il~Gk~~a~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I 80 (282)
T PRK14166 2 TLLDGKALSAKIKEELKEKNQFLKSK-GIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALI 80 (282)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 58999999999999999999999877 89999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017184 165 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 244 (375)
Q Consensus 165 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~ 244 (375)
++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+|+.|. .++|+||||+||+++|++|+++++||+
T Consensus 81 ~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~-~~~~~PcTp~avi~lL~~y~i~l~Gk~ 159 (282)
T PRK14166 81 NTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGL-ESGFLPCTPLGVMKLLKAYEIDLEGKD 159 (282)
T ss_pred HHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCC-CCCCcCCCHHHHHHHHHHhCCCCCCCE
Confidence 9999999999999999999999999999999999999999999999999763 468999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCCC
Q 017184 245 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 324 (375)
Q Consensus 245 vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~~ 324 (375)
|+|||||.+||||+++||+++|||||+||++|+|+++++++|||||+|+|+|++|+++|||+|++|||+|+|+..+
T Consensus 160 vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDvGin~~~~---- 235 (282)
T PRK14166 160 AVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINRLES---- 235 (282)
T ss_pred EEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEecccccCC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999643
Q ss_pred CCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017184 325 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 372 (375)
Q Consensus 325 ~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 372 (375)
| |++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus 236 -g-kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~v~a~~~~~ 281 (282)
T PRK14166 236 -G-KIVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKSAKNRL 281 (282)
T ss_pred -C-CeeCCCCHHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHhh
Confidence 2 899999999999999999999999999999999999999998754
No 12
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=9.9e-91 Score=670.81 Aligned_cols=279 Identities=52% Similarity=0.866 Sum_probs=270.7
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017184 85 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 164 (375)
Q Consensus 85 ~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I 164 (375)
++||||++|++|++++++++++|+++ |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~ildGk~iA~~i~~~ik~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I 80 (282)
T PRK14182 2 NLIDGKQIAAKVKGEVATEVRALAAR-GVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALI 80 (282)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 58999999999999999999999877 89999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccc-cccCCHHHHHHHHHHhCCCCCCC
Q 017184 165 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPL-FIPCTPKGCIELLHRYGFDIKGK 243 (375)
Q Consensus 165 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~-~~PcT~~gvi~lL~~~~i~l~GK 243 (375)
++||+|++||||+||+|||+|+|+.+++++|+|+|||||+|+.|+|+|+.| ..+ |+||||+||+++|++|+++++||
T Consensus 81 ~~lN~d~~V~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~~PcTp~avi~ll~~~~i~l~Gk 158 (282)
T PRK14182 81 ARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFHPFNVGALSIG--IAGVPRPCTPAGVMRMLDEARVDPKGK 158 (282)
T ss_pred HHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcCCCCHhHHHHHhCC--CCCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999999999999999999999999999999986 345 89999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 323 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~ 323 (375)
+|+|||||++||+|+++||+++|||||+||++|+|+++++++|||||+|+|+|++|+++|||+|++|||+|+|+..+
T Consensus 159 ~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~~~~~~ADIvI~AvGk~~~i~~~~ik~gaiVIDvGin~~~~--- 235 (282)
T PRK14182 159 RALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAGEVGRADILVAAIGKAELVKGAWVKEGAVVIDVGMNRLAD--- 235 (282)
T ss_pred EEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEeeceecCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999644
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017184 324 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 372 (375)
Q Consensus 324 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 372 (375)
| |++|||||+++.++|+++|||||||||||++|||+|+++++++|.
T Consensus 236 --g-kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~~~~~~~ 281 (282)
T PRK14182 236 --G-KLVGDVEFAAAAARASAITPVPGGVGPMTRAMLLVNTVELAKRTA 281 (282)
T ss_pred --C-CeeCCCCHHHHHhhccEecCCCCCChHHHHHHHHHHHHHHHHHhc
Confidence 2 899999999999999999999999999999999999999999884
No 13
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.2e-90 Score=674.73 Aligned_cols=287 Identities=49% Similarity=0.828 Sum_probs=275.1
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017184 84 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 163 (375)
Q Consensus 84 a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~ 163 (375)
+++||||++|+++++++++++++|+++ |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~il~Gk~vA~~i~~~l~~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~ 80 (297)
T PRK14167 2 TEIIDGNAVAAQIRDDLTDAIETLEDA-GVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDT 80 (297)
T ss_pred CeEEeHHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 579999999999999999999999876 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017184 164 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 243 (375)
Q Consensus 164 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK 243 (375)
|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+|+.| ++.|+||||+||+++|++|+++++||
T Consensus 81 I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk 158 (297)
T PRK14167 81 IDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHPENVGRLVAG--DARFKPCTPHGIQKLLAAAGVDTEGA 158 (297)
T ss_pred HHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 57899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHHhhC----CCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCC
Q 017184 244 RAVVIGRSNIVGMPAALLLQRE----DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVE 319 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~----gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~ 319 (375)
+|+|||||++||||+++||+++ |||||+||++|+|+++++++|||||+|+|+|++|+++|||+|++|||+|+|+.+
T Consensus 159 ~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gaiVIDvGin~~~ 238 (297)
T PRK14167 159 DVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDLAAKTRRADIVVAAAGVPELIDGSMLSEGATVIDVGINRVD 238 (297)
T ss_pred EEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEccccccC
Confidence 9999999999999999999998 899999999999999999999999999999999999999999999999999964
Q ss_pred CCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcc
Q 017184 320 DAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 374 (375)
Q Consensus 320 ~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 374 (375)
+. +.+|+|++|||||+++.++|++||||||||||||++|||+|+++++++.+++
T Consensus 239 ~~-~~~g~kl~GDVd~e~v~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~~ 292 (297)
T PRK14167 239 AD-TEKGYELVGDVEFESAKEKASAITPVPGGVGPMTRAMLLYNTVKAASLQEGV 292 (297)
T ss_pred cc-cccCCceeecCcHHHHHhhceEecCCCCCchHHHHHHHHHHHHHHHHHhcCC
Confidence 31 2235589999999999999999999999999999999999999999988765
No 14
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.4e-90 Score=671.02 Aligned_cols=283 Identities=55% Similarity=0.904 Sum_probs=274.2
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017184 82 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 161 (375)
Q Consensus 82 m~a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~ 161 (375)
|++++||||++|++|++++++++++|+++ |++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||+
T Consensus 1 ~~~~il~Gk~vA~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~ 79 (284)
T PRK14190 1 MMAVIIDGKEVAKEKREQLKEEVVKLKEQ-GIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELL 79 (284)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 34679999999999999999999999877 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017184 162 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 241 (375)
Q Consensus 162 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~ 241 (375)
+.|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+|+.| .++|+||||+||+++|++|+++++
T Consensus 80 ~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~ 157 (284)
T PRK14190 80 ALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVDGFHPINVGRMMLG--QDTFLPCTPHGILELLKEYNIDIS 157 (284)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccCHhhHHHHhcC--CCCCCCCCHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 578999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCC
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 321 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~ 321 (375)
||+|+|||||++||+|+++||+++|||||+||++|+++++++++|||||+|+|+|++|+++|||+|++|||+|+|+.++
T Consensus 158 Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~~~~ADIvI~AvG~p~~i~~~~ik~gavVIDvGi~~~~~- 236 (284)
T PRK14190 158 GKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAELTKQADILIVAVGKPKLITADMVKEGAVVIDVGVNRLEN- 236 (284)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeccccCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017184 322 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 373 (375)
Q Consensus 322 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 373 (375)
| |++|||||+++.++|++||||||||||||++|||+|+++++++|.+
T Consensus 237 ----g-kl~GDvd~e~v~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~ 283 (284)
T PRK14190 237 ----G-KLCGDVDFDNVKEKASYITPVPGGVGPMTITMLMHNTVELAKRAGG 283 (284)
T ss_pred ----C-CeeccCcHHHHhhhceEecCCCCCChHHHHHHHHHHHHHHHHHhhc
Confidence 2 8999999999999999999999999999999999999999998865
No 15
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.7e-90 Score=668.40 Aligned_cols=277 Identities=42% Similarity=0.738 Sum_probs=267.8
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017184 84 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 163 (375)
Q Consensus 84 a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~ 163 (375)
+++||||++|+++++++++++++|+++...+|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~ildGk~iA~~i~~~lk~~i~~l~~~g~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~ 81 (278)
T PRK14172 2 GQIINGKEVALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGIDFKKIKLDESISEEDLINE 81 (278)
T ss_pred CeEEeHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 57999999999999999999999987733569999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017184 164 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 243 (375)
Q Consensus 164 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK 243 (375)
|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+++.| .++|+||||+||+++|++|+++++||
T Consensus 82 I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~av~~lL~~~~i~l~Gk 159 (278)
T PRK14172 82 IEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTFISVGKFYKG--EKCFLPCTPNSVITLIKSLNIDIEGK 159 (278)
T ss_pred HHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccCccCHhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999987 57899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 323 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~ 323 (375)
+|+|||||++||+|+++||+++|||||+||++|+||++++++|||||+|+|+|++|+++|||+|++|||+|+|+.++
T Consensus 160 ~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~~~g--- 236 (278)
T PRK14172 160 EVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVAIGRPKFIDEEYVKEGAIVIDVGTSSVNG--- 236 (278)
T ss_pred EEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCcEEEEeeccccCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999642
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHH
Q 017184 324 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAK 369 (375)
Q Consensus 324 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~ 369 (375)
|++|||||+++.++|++||||||||||||++|||+|++++++
T Consensus 237 ----kl~GDvd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~ 278 (278)
T PRK14172 237 ----KITGDVNFDKVIDKASYITPVPGGVGSLTTTLLIKNVCEALK 278 (278)
T ss_pred ----ceeeeccHHHHHhhccEecCCCCCccHHHHHHHHHHHHHhcC
Confidence 899999999999999999999999999999999999999864
No 16
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.3e-90 Score=668.80 Aligned_cols=279 Identities=47% Similarity=0.775 Sum_probs=271.0
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017184 82 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 161 (375)
Q Consensus 82 m~a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~ 161 (375)
|.+++||||++|++|++++++++++|+++.+.+|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++++|++
T Consensus 1 ~~~~ildGk~ia~~i~~~lk~~i~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~ 80 (284)
T PRK14177 1 MSPILLDGKKLSEKIRNEIRETIEERKTKNKRIPKLATILVGNNPASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELL 80 (284)
T ss_pred CCCeEeEhHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 56789999999999999999999999988778899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017184 162 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 241 (375)
Q Consensus 162 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~ 241 (375)
+.|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+|+.| .++|+||||+||+++|++|+++++
T Consensus 81 ~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~ll~~y~i~l~ 158 (284)
T PRK14177 81 GVIDKLNLDPNVDGILLQHPVPSQIDERAAFDRIALEKDVDGVTTLSFGKLSMG--VETYLPCTPYGMVLLLKEYGIDVT 158 (284)
T ss_pred HHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccccCChhhHHHHHcC--CCCCCCCCHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 578999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCC
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 321 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~ 321 (375)
||+|+|||||++||+|+++||+++|||||+||++|+|+++++++|||||+|+|+|+++++||||+|++|||+|+|+
T Consensus 159 Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~~~ADIvIsAvGk~~~i~~~~ik~gavVIDvGin~---- 234 (284)
T PRK14177 159 GKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIVRQADIIVGAVGKPEFIKADWISEGAVLLDAGYNP---- 234 (284)
T ss_pred CCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEeCCCcCccCHHHcCCCCEEEEecCcc----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017184 322 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 372 (375)
Q Consensus 322 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 372 (375)
+++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus 235 ------~~~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 279 (284)
T PRK14177 235 ------GNVGDIEISKAKDKSSFYTPVPGGVGPMTIAVLLLQTLYSFKEHF 279 (284)
T ss_pred ------cccCCcCHHHHhhhccEecCCCCCChHHHHHHHHHHHHHHHHhcc
Confidence 479999999999999999999999999999999999999997654
No 17
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=4.2e-90 Score=668.01 Aligned_cols=280 Identities=52% Similarity=0.837 Sum_probs=272.3
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017184 85 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 164 (375)
Q Consensus 85 ~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I 164 (375)
++||||++|++|+++++++++.|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|
T Consensus 2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I 81 (286)
T PRK14184 2 LLLDGKATAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLI 81 (286)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 58999999999999999999999988789999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017184 165 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 244 (375)
Q Consensus 165 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~ 244 (375)
++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++||+
T Consensus 82 ~~lN~d~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~Gk~ 159 (286)
T PRK14184 82 AELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHPENMGRLALG--LPGFRPCTPAGVMTLLERYGLSPAGKK 159 (286)
T ss_pred HHHhCCCcCceEEEecCCCCCCCHHHHHhccCcccCcccCCHhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999976 578999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHHhh----CCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCC
Q 017184 245 AVVIGRSNIVGMPAALLLQR----EDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVED 320 (375)
Q Consensus 245 vvVIGrs~~VGkpla~lL~~----~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~ 320 (375)
|+|||||++||+|+++||++ +|||||+||++|+++++++++|||||+|+|+|++|+++|+|+|++|||+|+|+.++
T Consensus 160 vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~AvG~p~li~~~~vk~GavVIDVGi~~~~~ 239 (286)
T PRK14184 160 AVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVAIGRPRFVTADMVKPGAVVVDVGINRTDD 239 (286)
T ss_pred EEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeeeccCC
Confidence 99999999999999999999 89999999999999999999999999999999999999999999999999999743
Q ss_pred CCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017184 321 AKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 373 (375)
Q Consensus 321 ~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 373 (375)
+++|||||+++.++|++||||||||||||++|||+|+++++++..|
T Consensus 240 -------~l~GDVdf~~v~~~a~~iTPVPGGVGp~Tva~Ll~N~~~a~~~~~~ 285 (286)
T PRK14184 240 -------GLVGDCDFEGLSDVASAITPVPGGVGPMTIAQLLVNTVQSWKERVG 285 (286)
T ss_pred -------CccCCccHHHHHhhceEecCCCCCChHHHHHHHHHHHHHHHHHhhC
Confidence 6999999999999999999999999999999999999999987665
No 18
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=6.7e-90 Score=665.41 Aligned_cols=280 Identities=46% Similarity=0.795 Sum_probs=271.1
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017184 85 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 164 (375)
Q Consensus 85 ~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I 164 (375)
.+||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++++|+++.|
T Consensus 2 ~ildGk~va~~i~~~lk~~v~~~~~~~g~~P~La~I~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I 81 (282)
T PRK14180 2 ILIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELI 81 (282)
T ss_pred ceeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 48999999999999999999999887789999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017184 165 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 244 (375)
Q Consensus 165 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~ 244 (375)
++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+++.|+ ..+|+||||+||+++|++|+++++||+
T Consensus 82 ~~lN~D~~V~GIivq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~-~~~~~PcTp~aii~lL~~y~i~l~Gk~ 160 (282)
T PRK14180 82 DQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRD-KKCLESCTPKGIMTMLREYGIKTEGAY 160 (282)
T ss_pred HHHhCCCCCCeEEEcCCCCCCCCHHHHHhhcCccccccccChhhHHHHhcCC-CCCcCCCCHHHHHHHHHHhCCCCCCCE
Confidence 9999999999999999999999999999999999999999999999999763 368999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCCC
Q 017184 245 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 324 (375)
Q Consensus 245 vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~~ 324 (375)
|+|||||++||+|+++||.++|||||+||++|+||++++++|||||+|+|+|++++++|||+|++|||+|+|+.++
T Consensus 161 vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~~k~ADIvIsAvGkp~~i~~~~vk~gavVIDvGin~~~g---- 236 (282)
T PRK14180 161 AVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVDG---- 236 (282)
T ss_pred EEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHHhhhcCEEEEccCCcCcCCHHHcCCCcEEEEecccccCC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999632
Q ss_pred CCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017184 325 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 372 (375)
Q Consensus 325 ~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 372 (375)
|++|||||+++.++|+++|||||||||||++|||+|++++++++.
T Consensus 237 ---kl~GDvd~~~v~~~a~~iTPVPGGVGp~T~a~L~~Nl~~a~~~~~ 281 (282)
T PRK14180 237 ---KIVGDVDFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCAQELN 281 (282)
T ss_pred ---ceeCCcCHHHHHhhccEeccCCCChhHHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999999999999999999998764
No 19
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.1e-89 Score=668.10 Aligned_cols=286 Identities=51% Similarity=0.830 Sum_probs=274.1
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017184 84 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 163 (375)
Q Consensus 84 a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~ 163 (375)
+++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~ildGk~iA~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~ 81 (297)
T PRK14186 2 ALILDGKALAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEAL 81 (297)
T ss_pred CEEeehHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 57999999999999999999999988878999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017184 164 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 243 (375)
Q Consensus 164 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK 243 (375)
|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+|+.| ...|+||||.||+++|++|+++++||
T Consensus 82 I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~Gk 159 (297)
T PRK14186 82 IAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPDKDADGLHPLNLGRLVKG--EPGLRSCTPAGVMRLLRSQQIDIAGK 159 (297)
T ss_pred HHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 46799999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 323 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~ 323 (375)
+|+|||||++||+|+++||+++|||||+||++|+|+++++++|||||+|+|+|++++++|||+|++|||+|+|+.+++ +
T Consensus 160 ~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~~~~~-~ 238 (297)
T PRK14186 160 KAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASITREADILVAAAGRPNLIGAEMVKPGAVVVDVGIHRLPSS-D 238 (297)
T ss_pred EEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccccccc-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999996432 1
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017184 324 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 373 (375)
Q Consensus 324 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 373 (375)
.+| |++|||||+++.++|++||||||||||||++|||+|+++++++..+
T Consensus 239 ~~g-kl~GDvd~~~v~~~a~~iTPVPGGVGp~T~a~L~~Nl~~a~~~~~~ 287 (297)
T PRK14186 239 GKT-RLCGDVDFEEVEPVAAAITPVPGGVGPMTVTMLLVNTVLSWQKRHG 287 (297)
T ss_pred cCC-ceeCCccHHHHHhhceEecCCCCCchHHHHHHHHHHHHHHHHHhhC
Confidence 124 8999999999999999999999999999999999999999987653
No 20
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.3e-89 Score=662.82 Aligned_cols=278 Identities=53% Similarity=0.880 Sum_probs=269.9
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017184 85 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 164 (375)
Q Consensus 85 ~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I 164 (375)
++||||++|++|+++++++++.|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I 81 (281)
T PRK14183 2 QILDGKALSDKIKENVKKEVDELKLVKNIVPGLAVILVGDDPASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETI 81 (281)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 68999999999999999999999874489999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017184 165 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 244 (375)
Q Consensus 165 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~ 244 (375)
++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+++.| +++|+||||+||+++|++|+++++||+
T Consensus 82 ~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk~ 159 (281)
T PRK14183 82 AMMNNNPNIDGILVQLPLPKHIDTTKILEAIDPKKDVDGFHPYNVGRLVTG--LDGFVPCTPLGVMELLEEYEIDVKGKD 159 (281)
T ss_pred HHHhCCCccCeEEEeCCCCCCCCHHHHHhccCchhcccccChhhhhHHhcC--CCCCCCCcHHHHHHHHHHcCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999986 578999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCCC
Q 017184 245 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 324 (375)
Q Consensus 245 vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~~ 324 (375)
|+|||||++||+|+++||+++|||||+||++|+||++++++|||||+|+|+|++++++|||+|++|||+|+|+.++
T Consensus 160 vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~~~~ADIvV~AvGkp~~i~~~~vk~gavvIDvGin~~~~---- 235 (281)
T PRK14183 160 VCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAHTKKADIVIVGVGKPNLITEDMVKEGAIVIDIGINRTED---- 235 (281)
T ss_pred EEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEecCcccccCHHHcCCCcEEEEeeccccCC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999644
Q ss_pred CCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHH
Q 017184 325 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKR 370 (375)
Q Consensus 325 ~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~ 370 (375)
| |++|||||+++.+++++||||||||||||++|||+|+++++++
T Consensus 236 -g-kl~GDVd~~~~~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~ 279 (281)
T PRK14183 236 -G-RLVGDVDFENVAKKCSYITPVPGGVGPMTIAMLLSNTLKAAKN 279 (281)
T ss_pred -C-CeECCccHHHHHhhceEecCCCCCChHHHHHHHHHHHHHHHHh
Confidence 2 8999999999999999999999999999999999999999975
No 21
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1e-89 Score=665.21 Aligned_cols=280 Identities=47% Similarity=0.787 Sum_probs=267.8
Q ss_pred eeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHH
Q 017184 86 VIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHIS 165 (375)
Q Consensus 86 ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I~ 165 (375)
+||||++|++|++++++++++| +++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|+
T Consensus 2 ildGk~iA~~i~~~~k~~v~~l----~~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~ 77 (287)
T PRK14181 2 LLKGAPAAEHILATIKENISAS----STAPGLAVVLIGNDPASEVYVGMKVKKATDLGMVSKAHRLPSDATLSDILKLIH 77 (287)
T ss_pred eeeHHHHHHHHHHHHHHHHHHh----CCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHH
Confidence 7999999999999999999988 679999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEE
Q 017184 166 VFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRA 245 (375)
Q Consensus 166 ~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~v 245 (375)
+||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|+ .++|+||||+||+++|++|+++++||+|
T Consensus 78 ~lN~d~~V~GIlvqlPlP~~i~~~~i~~~I~p~KDVDGl~p~n~g~l~~g~-~~~~~PcTp~avi~lL~~~~i~l~Gk~v 156 (287)
T PRK14181 78 RLNNDPNIHGILVQLPLPKHLDAQAILQAISPDKDVDGLHPVNMGKLLLGE-TDGFIPCTPAGIIELLKYYEIPLHGRHV 156 (287)
T ss_pred HHhCCCCCCeEEEcCCCCCCcCHHHHHhccCcccCcccCChhhHHHHhcCC-CCCCCCCCHHHHHHHHHHhCCCCCCCEE
Confidence 999999999999999999999999999999999999999999999999863 4679999999999999999999999999
Q ss_pred EEEcCCcccHHHHHHHHhhC----CCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCC
Q 017184 246 VVIGRSNIVGMPAALLLQRE----DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 321 (375)
Q Consensus 246 vVIGrs~~VGkpla~lL~~~----gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~ 321 (375)
+|||||++||||+++||+++ |||||+||++|+|+++++++|||||+|+|+|++|+++|||+|++|||+|+|++.+.
T Consensus 157 vViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~~~~~~ADIvV~AvG~p~~i~~~~ik~GavVIDvGin~~~~~ 236 (287)
T PRK14181 157 AIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLTEILKTADIIIAAIGVPLFIKEEMIAEKAVIVDVGTSRVPAA 236 (287)
T ss_pred EEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccccccc
Confidence 99999999999999999999 89999999999999999999999999999999999999999999999999996431
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHH
Q 017184 322 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRV 371 (375)
Q Consensus 322 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~ 371 (375)
..+|+|++|||||+++.++|+|+|||||||||||++|||+|++++++++
T Consensus 237 -~~~g~kl~GDVd~e~~~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~ 285 (287)
T PRK14181 237 -NPKGYILVGDVDFNNVVPKCRAITPVPGGVGPMTVAMLMRNTWESYLRH 285 (287)
T ss_pred -cCCCCeeEeccchHHHHhhcccccCCCCchHHHHHHHHHHHHHHHHHhh
Confidence 1224589999999999999999999999999999999999999999865
No 22
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.6e-89 Score=663.59 Aligned_cols=284 Identities=54% Similarity=0.878 Sum_probs=275.0
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017184 82 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 161 (375)
Q Consensus 82 m~a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~ 161 (375)
|.+++||||++|+++++++++++++|+++.+++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||+
T Consensus 1 M~~~ildGk~va~~i~~~lk~~v~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~ 80 (285)
T PRK10792 1 MTAKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSDPASQVYVASKRKACEEVGFVSRSYDLPETTSEAELL 80 (285)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 34679999999999999999999999888788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017184 162 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 241 (375)
Q Consensus 162 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~ 241 (375)
+.|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++
T Consensus 81 ~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~ 158 (285)
T PRK10792 81 ALIDELNADPTIDGILVQLPLPAHIDNVKVLERIHPDKDVDGFHPYNVGRLAQR--IPLLRPCTPRGIMTLLERYGIDTY 158 (285)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccCccChhhHhHHhCC--CCCCCCCCHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 578999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCC
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 321 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~ 321 (375)
||+|+|||||++||+|++++|+++|||||+||++|+||++++++|||||+|+|+|++|+++|+|+|++|||+|+|+.++
T Consensus 159 Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvi~avG~p~~v~~~~vk~gavVIDvGin~~~~- 237 (285)
T PRK10792 159 GLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHHVRNADLLVVAVGKPGFIPGEWIKPGAIVIDVGINRLED- 237 (285)
T ss_pred CCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHHHhhCCEEEEcCCCcccccHHHcCCCcEEEEcccccccC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017184 322 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 373 (375)
Q Consensus 322 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 373 (375)
| |++|||||+++.++|+++|||||||||||++|||+|+++++++|++
T Consensus 238 ----g-k~~GDvd~~~~~~~a~~itPvPGGVGp~T~a~L~~N~~~a~~~~~~ 284 (285)
T PRK10792 238 ----G-KLVGDVEFETAAERASWITPVPGGVGPMTVATLLENTLQACEEYHD 284 (285)
T ss_pred ----C-CcCCCcCHHHHHhhccCcCCCCCCChHHHHHHHHHHHHHHHHHhhc
Confidence 2 7999999999999999999999999999999999999999999975
No 23
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.1e-89 Score=662.52 Aligned_cols=280 Identities=46% Similarity=0.831 Sum_probs=270.1
Q ss_pred cceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHH
Q 017184 83 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLK 162 (375)
Q Consensus 83 ~a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~ 162 (375)
++.+||||++|++|+++++++++.|+++ |++|+||+|+||+|++|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus 2 ~~~il~Gk~va~~i~~~l~~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~ 80 (284)
T PRK14193 2 TAIILDGKATADEIKADLAERVAALKEK-GITPGLGTVLVGDDPGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELNA 80 (284)
T ss_pred CCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 3578999999999999999999999877 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCC
Q 017184 163 HISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKG 242 (375)
Q Consensus 163 ~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~G 242 (375)
.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| ...|+||||+||+++|++|+++++|
T Consensus 81 ~I~~lN~D~~V~GIlvqlPlP~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~G 158 (284)
T PRK14193 81 VIDELNADPACTGYIVQLPLPKHLDENAVLERIDPAKDADGLHPTNLGRLVLN--EPAPLPCTPRGIVHLLRRYDVELAG 158 (284)
T ss_pred HHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcccCccCCChhhhhHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999976 5679999999999999999999999
Q ss_pred CEEEEEcCCcccHHHHHHHHhh--CCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQR--EDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVED 320 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~--~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~ 320 (375)
|+|+|||||++||+|+++||++ +|||||+||++|+|+++++++|||||+|+|+|++|+++|||+|++|||+|+|+..+
T Consensus 159 k~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~~~~k~ADIvV~AvGkp~~i~~~~ik~GavVIDvGin~~~~ 238 (284)
T PRK14193 159 AHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLAAHTRRADIIVAAAGVAHLVTADMVKPGAAVLDVGVSRAGD 238 (284)
T ss_pred CEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHHHHHHhCCEEEEecCCcCccCHHHcCCCCEEEEccccccCC
Confidence 9999999999999999999998 79999999999999999999999999999999999999999999999999999644
Q ss_pred CCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017184 321 AKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 372 (375)
Q Consensus 321 ~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 372 (375)
| |++|||| +++.++|++||||||||||||++|||+|+++++++..
T Consensus 239 -----g-kl~GDvd-~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 283 (284)
T PRK14193 239 -----G-KLVGDVH-PDVWEVAGAVSPNPGGVGPMTRAFLLTNVVERAERRA 283 (284)
T ss_pred -----C-cEEeecC-HhHHhhCCEEeCCCCChhHHHHHHHHHHHHHHHHHhh
Confidence 2 8999999 8899999999999999999999999999999998654
No 24
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=4.3e-89 Score=660.99 Aligned_cols=283 Identities=52% Similarity=0.846 Sum_probs=273.6
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017184 82 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 161 (375)
Q Consensus 82 m~a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~ 161 (375)
|.+++||||++|++|++++++++++|+++ |++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|++
T Consensus 1 M~~~ildGk~va~~i~~~lk~~i~~l~~~-g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~ 79 (285)
T PRK14189 1 MTAQLIDGNALSKQLRAEAAQRAAALTAR-GHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELL 79 (285)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 44679999999999999999999999877 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017184 162 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 241 (375)
Q Consensus 162 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~ 241 (375)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+++.| .++|+||||+||+++|++|+++++
T Consensus 80 ~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~ 157 (285)
T PRK14189 80 ARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTG--QPLFRPCTPYGVMKMLESIGIPLR 157 (285)
T ss_pred HHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCC--CCCCcCCCHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 578999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCC
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 321 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~ 321 (375)
||+|+|||||++||+|++++|.++|||||+||++|+|+++++++|||||+|+|+|++++++|+|+|++|||+|+|+..+
T Consensus 158 Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~avG~~~~i~~~~ik~gavVIDVGin~~~~- 236 (285)
T PRK14189 158 GAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAAVGKRNVLTADMVKPGATVIDVGMNRDDA- 236 (285)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEcCCCcCccCHHHcCCCCEEEEccccccCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999644
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017184 322 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 373 (375)
Q Consensus 322 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 373 (375)
| |++|||||+++.++|+++|||||||||||++|||+|++++++++..
T Consensus 237 ----g-kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~Ll~N~~~a~~~~~~ 283 (285)
T PRK14189 237 ----G-KLCGDVDFAGVKEVAGYITPVPGGVGPMTITMLLVNTIEAAERAAA 283 (285)
T ss_pred ----C-CeeCCccHHHHHhhceEecCCCCCchHHHHHHHHHHHHHHHHHhhc
Confidence 2 8999999999999999999999999999999999999999998764
No 25
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=4.1e-89 Score=661.00 Aligned_cols=279 Identities=48% Similarity=0.813 Sum_probs=271.0
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017184 84 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 163 (375)
Q Consensus 84 a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~ 163 (375)
+++||||++|++|+++++++++.|+++.|++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 8 ~~ildGk~iA~~i~~~l~~~i~~l~~~~g~~P~Laii~vg~d~aS~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~ 87 (287)
T PRK14176 8 SRIIDGKALAKKIEAEVRSGVERLKSNRGITPGLATILVGDDPASKMYVRLKHKACERVGIRAEDQFLPADTTQEELLEL 87 (287)
T ss_pred eEEEEhHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 68999999999999999999999988778999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017184 164 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 243 (375)
Q Consensus 164 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK 243 (375)
|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+|+.| +++|+||||+||+++|++|+++++||
T Consensus 88 I~~LN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g--~~~~~PcTp~av~~ll~~~~i~l~Gk 165 (287)
T PRK14176 88 IDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDPAKDADGFHPYNMGKLMIG--DEGLVPCTPHGVIRALEEYGVDIEGK 165 (287)
T ss_pred HHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCccccccccChhhhhhHhcC--CCCCCCCcHHHHHHHHHHcCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 56899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 323 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~ 323 (375)
+|+|||||++||+|++++|+++|||||+||++|+|+++++++|||||+|+|+|++|+++|+|+|++|||+|+|+.+
T Consensus 166 ~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvv~AvG~p~~i~~~~vk~gavVIDvGin~~~---- 241 (287)
T PRK14176 166 NAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKYTLDADILVVATGVKHLIKADMVKEGAVIFDVGITKEE---- 241 (287)
T ss_pred EEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHHHhhCCEEEEccCCccccCHHHcCCCcEEEEecccccC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999853
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHH
Q 017184 324 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRV 371 (375)
Q Consensus 324 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~ 371 (375)
| |++|||||+.+.++|+++|||||||||||++|||+|+++++++.
T Consensus 242 --g-kl~GDvd~~~~~~~a~~iTPVPGGVGp~T~a~L~~n~~~a~~~~ 286 (287)
T PRK14176 242 --D-KVYGDVDFENVIKKASLITPVPGGVGPLTIAMLMKHVLMCAEKS 286 (287)
T ss_pred --C-CccCCcCHHHHHhhceEcCCCCCCChHHHHHHHHHHHHHHHHhc
Confidence 2 89999999999999999999999999999999999999998754
No 26
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.2e-88 Score=657.52 Aligned_cols=280 Identities=49% Similarity=0.783 Sum_probs=271.9
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017184 85 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 164 (375)
Q Consensus 85 ~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I 164 (375)
++||||++|++|++++++++++|+++.|++|+|++|+||+|++|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~il~Gk~~A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I 81 (285)
T PRK14191 2 VLLDGKALSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLI 81 (285)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 68999999999999999999999877789999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017184 165 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 244 (375)
Q Consensus 165 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~ 244 (375)
++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||+||+++|++|+++++||+
T Consensus 82 ~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk~ 159 (285)
T PRK14191 82 KDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFHPLNIGKLCSQ--LDGFVPATPMGVMRLLKHYHIEIKGKD 159 (285)
T ss_pred HHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcC--CCCCCCCcHHHHHHHHHHhCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999977 578999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCCC
Q 017184 245 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 324 (375)
Q Consensus 245 vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~~ 324 (375)
|+|||||++||+|++++|+++|||||+||++|+||.+++++|||||+|+|+|++++++|||+|++|||+|+|++++
T Consensus 160 vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~~~~~~ADIvV~AvG~p~~i~~~~vk~GavVIDvGi~~~~~---- 235 (285)
T PRK14191 160 VVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLSFYTQNADIVCVGVGKPDLIKASMVKKGAVVVDIGINRLND---- 235 (285)
T ss_pred EEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCEEEEecCCCCcCCHHHcCCCcEEEEeecccccC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017184 325 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 372 (375)
Q Consensus 325 ~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 372 (375)
| |++|||||+++.+++++||||||||||||++|||+|+++++++..
T Consensus 236 -g-klvGDvd~e~v~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~ 281 (285)
T PRK14191 236 -G-RLVGDVDFENVAPKASFITPVPGGVGPMTIVSLLENTLIAAEKRQ 281 (285)
T ss_pred -C-ceeccccHHHHhhhccEEecCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 2 899999999999999999999999999999999999999998654
No 27
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=3.4e-88 Score=654.41 Aligned_cols=281 Identities=52% Similarity=0.885 Sum_probs=273.7
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017184 84 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 163 (375)
Q Consensus 84 a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~ 163 (375)
+++||||++|++|++++|+++++++++.|++|+|++|+||+|++|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~ildGk~ia~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~ 81 (284)
T PRK14179 2 TEIIDGKALAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDL 81 (284)
T ss_pred CeEEEhHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 57999999999999999999999988878999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017184 164 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 243 (375)
Q Consensus 164 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK 243 (375)
|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+|+.| +++|+||||.||+++|++|+++++||
T Consensus 82 I~~lN~d~~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk 159 (284)
T PRK14179 82 IERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSG--RPVMIPCTPAGIMEMFREYNVELEGK 159 (284)
T ss_pred HHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 67899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 323 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~ 323 (375)
+|+|||+|++||+|++++|+++|||||+||++|+++++++++|||||+++|+|++++++|+++|++|||+|+|+..+
T Consensus 160 ~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~avg~~~~v~~~~ik~GavVIDvgin~~~~--- 236 (284)
T PRK14179 160 HAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVAIGRGHFVTKEFVKEGAVVIDVGMNRDEN--- 236 (284)
T ss_pred EEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEecCccccCCHHHccCCcEEEEecceecCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999654
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017184 324 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 372 (375)
Q Consensus 324 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 372 (375)
| |++|||||+++.++|++||||||||||||++|||+|+++++++|.
T Consensus 237 --g-kl~GDVdf~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 282 (284)
T PRK14179 237 --G-KLIGDVDFDEVAEVASYITPVPGGVGPMTITMLMEQTYQAALRSL 282 (284)
T ss_pred --C-CeecCccHHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 2 899999999999999999999999999999999999999999986
No 28
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=3e-88 Score=655.32 Aligned_cols=280 Identities=49% Similarity=0.821 Sum_probs=266.8
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017184 82 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 161 (375)
Q Consensus 82 m~a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~ 161 (375)
|.+++||||++|++|++++++++++| +++|+|++|+||+|++|..|+++|.|+|+++||+++.++||++++|+||+
T Consensus 1 m~~~il~Gk~vA~~i~~~l~~~v~~l----~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~ 76 (287)
T PRK14173 1 MAARELSGPPAAEAVYAELRARLAKL----PFVPHLRVVRLGEDPASVSYVRLKDRQAKALGLRSQVEVLPESTSQEELL 76 (287)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHh----CCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 44579999999999999999999988 47899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017184 162 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 241 (375)
Q Consensus 162 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~ 241 (375)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .+.|+||||+||+++|++|+++++
T Consensus 77 ~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~ 154 (287)
T PRK14173 77 ELIARLNADPEVDGILVQLPLPPHIDFQRVLEAIDPLKDVDGFHPLNVGRLWMG--GEALEPCTPAGVVRLLKHYGIPLA 154 (287)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccChhhhHHHhcC--CCCCCCCCHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 467999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCC
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 321 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~ 321 (375)
||+|+|||||++||+|+++||+++|||||+||++|+|+++++++|||||+|+|+|++++++|||+|++|||+|+|++.+.
T Consensus 155 Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDVGin~~~~~ 234 (287)
T PRK14173 155 GKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAVTRRADVLVVAVGRPHLITPEMVRPGAVVVDVGINRVGGN 234 (287)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999996210
Q ss_pred CCCCCce--eecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017184 322 KSPRGYR--LVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 372 (375)
Q Consensus 322 ~~~~g~k--l~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 372 (375)
+| | ++|||| +++.++|+++|||||||||||++|||+|+++++++..
T Consensus 235 ---~g-k~~l~GDVd-~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 282 (287)
T PRK14173 235 ---GG-RDILTGDVH-PEVAEVAGALTPVPGGVGPMTVAMLMANTVIAALRRR 282 (287)
T ss_pred ---CC-ceeeecccc-HhHHhhCcEEecCCCChhHHHHHHHHHHHHHHHHHHc
Confidence 13 5 999999 6889999999999999999999999999999998654
No 29
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=8.5e-88 Score=655.01 Aligned_cols=288 Identities=54% Similarity=0.876 Sum_probs=274.7
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017184 85 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 164 (375)
Q Consensus 85 ~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I 164 (375)
.+||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~il~Gk~iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I 81 (295)
T PRK14174 2 LIIDGKKVSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKI 81 (295)
T ss_pred EEEeHHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 47999999999999999999999888789999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017184 165 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 244 (375)
Q Consensus 165 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~ 244 (375)
++||+|++||||+||+|||+|+|+.+++++|+|+|||||+|+.|+|+|+.|+..++|+||||+||+++|++|+++++||+
T Consensus 82 ~~lN~D~~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~ 161 (295)
T PRK14174 82 EDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKH 161 (295)
T ss_pred HHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCE
Confidence 99999999999999999999999999999999999999999999999998753478999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHHhh----CCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCC
Q 017184 245 AVVIGRSNIVGMPAALLLQR----EDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVED 320 (375)
Q Consensus 245 vvVIGrs~~VGkpla~lL~~----~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~ 320 (375)
|+|||||++||+|+++||++ +|+||++||++|+++++++++|||||+|+|+|++|+++|+|+|++|||+|+++.++
T Consensus 162 vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~Avg~~~li~~~~vk~GavVIDVgi~~~~~ 241 (295)
T PRK14174 162 CVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAAIGKARFITADMVKPGAVVIDVGINRIED 241 (295)
T ss_pred EEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEecCccCccCHHHcCCCCEEEEeecccccc
Confidence 99999999999999999998 78999999999999999999999999999999999999999999999999999754
Q ss_pred CCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017184 321 AKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 372 (375)
Q Consensus 321 ~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 372 (375)
+++..|+|++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus 242 ~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~Nl~~a~~~~~ 293 (295)
T PRK14174 242 PSTKSGYRLVGDVDYEGVSAKASAITPVPGGVGPMTIAMLLKNTLQSFERVN 293 (295)
T ss_pred ccccCCCceECCcCHHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 3333455899999999999999999999999999999999999999998754
No 30
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.6e-87 Score=650.56 Aligned_cols=284 Identities=51% Similarity=0.840 Sum_probs=273.5
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017184 82 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 161 (375)
Q Consensus 82 m~a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~ 161 (375)
|.+++||||++|++|+++++++++.|+++ |++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|++
T Consensus 1 m~~~il~Gk~ia~~i~~~~~~~v~~l~~~-g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~ 79 (286)
T PRK14175 1 MVAKILDGKQIAKDYRQGLQDQVEALKEK-GFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVL 79 (286)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 34579999999999999999999999877 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017184 162 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 241 (375)
Q Consensus 162 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~ 241 (375)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++
T Consensus 80 ~~I~~lN~d~~V~GIivq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~ai~~ll~~~~i~l~ 157 (286)
T PRK14175 80 NELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDGFHPINIGKLYID--EQTFVPCTPLGIMEILKHADIDLE 157 (286)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCCccchHhHhcC--CCCCCCCcHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 578999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCC
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 321 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~ 321 (375)
||+|+|||||++||+|++++|.++|||||+|||+|+++.+++++|||||+|+|+|++|+++|+|+|++|||+|+++..+
T Consensus 158 Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVIsAvg~p~~i~~~~vk~gavVIDvGi~~~~~- 236 (286)
T PRK14175 158 GKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMASYLKDADVIVSAVGKPGLVTKDVVKEGAVIIDVGNTPDEN- 236 (286)
T ss_pred CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHHHhhCCEEEECCCCCcccCHHHcCCCcEEEEcCCCcCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998544
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcc
Q 017184 322 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 374 (375)
Q Consensus 322 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 374 (375)
| |++|||||+++.++++++|||||||||||++|||+|+++++++..++
T Consensus 237 ----g-kl~GDvd~~~~~~~a~~iTPVPGGVGp~T~a~L~~n~~~a~~~~~~~ 284 (286)
T PRK14175 237 ----G-KLKGDVDYDAVKEIAGAITPVPGGVGPLTITMVLNNTLLAEKMRRGI 284 (286)
T ss_pred ----C-CeecCccHHHHHhhccCcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 3 89999999999999999999999999999999999999999876654
No 31
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=7.7e-87 Score=649.18 Aligned_cols=286 Identities=52% Similarity=0.862 Sum_probs=274.6
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017184 82 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 161 (375)
Q Consensus 82 m~a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~ 161 (375)
|.+++||||++|++|++++++++++|+++ |++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|++
T Consensus 2 m~~~il~Gk~iA~~i~~~lk~~i~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~ 80 (301)
T PRK14194 2 MSAKLIDGKAAAARVLAQVREDVRTLKAA-GIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLL 80 (301)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 44679999999999999999999999877 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017184 162 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 241 (375)
Q Consensus 162 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~ 241 (375)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++
T Consensus 81 ~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~ 158 (301)
T PRK14194 81 ALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQG--RDVLTPCTPSGCLRLLEDTCGDLT 158 (301)
T ss_pred HHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcC--CCCCCCCcHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 578999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCC
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 321 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~ 321 (375)
||+|+|||+|++||+|++.+|+++|++||+|||+|+++++++++|||||+++|.|++++++|+|+|++|||+|+|++.+.
T Consensus 159 Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsavg~~~~v~~~~ik~GaiVIDvgin~~~~~ 238 (301)
T PRK14194 159 GKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAVGRPRLIDADWLKPGAVVIDVGINRIDDD 238 (301)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEecCChhcccHhhccCCcEEEEecccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999996431
Q ss_pred CCCCC-ceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcc
Q 017184 322 KSPRG-YRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 374 (375)
Q Consensus 322 ~~~~g-~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 374 (375)
| +|++|||||+++.++|+++|||||||||||++|||+|+++++++|+..
T Consensus 239 ----g~~kl~GDvdf~~~~~~a~~iTPVPGGVGp~Tva~L~~N~~~a~~~~~~~ 288 (301)
T PRK14194 239 ----GRSRLVGDVDFDSALPVVSAITPVPGGVGPMTIAFLMKNTVTAARLQAHA 288 (301)
T ss_pred ----CCcceecccchHHHHhhcceecCCCCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 2 279999999999999999999999999999999999999999998753
No 32
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.3e-86 Score=640.01 Aligned_cols=273 Identities=51% Similarity=0.847 Sum_probs=265.7
Q ss_pred eeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHH
Q 017184 86 VIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHIS 165 (375)
Q Consensus 86 ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I~ 165 (375)
+||||++|++|+++++++++++ |++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|+
T Consensus 2 il~Gk~~a~~i~~~~~~~v~~l----g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~ 77 (279)
T PRK14178 2 ILDGKAVSEKRLELLKEEIIES----GLYPRLATVIVGDDPASQMYVRMKHRACERVGIGSVGIELPGDATTRTVLERIR 77 (279)
T ss_pred eeeHHHHHHHHHHHHHHHHHHh----CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHH
Confidence 7999999999999999999987 789999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEE
Q 017184 166 VFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRA 245 (375)
Q Consensus 166 ~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~v 245 (375)
+||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.|++++|++|+++++||+|
T Consensus 78 ~lN~D~~V~GIlvqlPLp~~i~~~~v~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~Gk~V 155 (279)
T PRK14178 78 RLNEDPDINGILVQLPLPKGVDTERVIAAILPEKDVDGFHPLNLGRLVSG--LPGFAPCTPNGIMTLLHEYKISIAGKRA 155 (279)
T ss_pred HHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCC--CCCCCCCCHHHHHHHHHHcCCCCCCCEE
Confidence 99999999999999999999999999999999999999999999999976 5789999999999999999999999999
Q ss_pred EEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCC
Q 017184 246 VVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPR 325 (375)
Q Consensus 246 vVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~~~ 325 (375)
+|||||..||+|++++|.++||+||+||++|+++++++++|||||+|+|+|++++++|+|+|++|||+|+++.+
T Consensus 156 ~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~Avgk~~lv~~~~vk~GavVIDVgi~~~~------ 229 (279)
T PRK14178 156 VVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSAAGKAGFITPDMVKPGATVIDVGINQVN------ 229 (279)
T ss_pred EEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEECCCcccccCHHHcCCCcEEEEeeccccC------
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999863
Q ss_pred CceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHH
Q 017184 326 GYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRV 371 (375)
Q Consensus 326 g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~ 371 (375)
| |++|||||+++.++++++|||||||||||++|||+|+++++++.
T Consensus 230 g-kl~GDvdf~~~~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~ 274 (279)
T PRK14178 230 G-KLCGDVDFDAVKEIAGAITPVPGGVGPMTIATLMENTFDAAKMR 274 (279)
T ss_pred C-CCcCCccHHHHHhhccCcCCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 2 89999999999999999999999999999999999999999764
No 33
>KOG4230 consensus C1-tetrahydrofolate synthase [Coenzyme transport and metabolism]
Probab=100.00 E-value=6.3e-86 Score=671.62 Aligned_cols=291 Identities=54% Similarity=0.903 Sum_probs=285.6
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhcc-CCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHH
Q 017184 82 ASAKVIDGKAVAKQIRDEITGEVSRMKDAI-GVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEV 160 (375)
Q Consensus 82 m~a~ildGk~la~~i~~~lk~~v~~l~~~~-g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el 160 (375)
|.+.||+||++|+++|++++++++.+|+.. +++|.|+|||||++++|+.|+|+|.|+++++||++.+++||++++|-||
T Consensus 1 ~~a~IL~Gk~la~kvr~~v~~eI~~ik~~~PnF~p~LaIiQVGnR~DSnvYVrmKlKAA~e~Gid~~~iklPetiTe~el 80 (935)
T KOG4230|consen 1 MVAEILSGKELARKVREDVAEEIQSIKEHHPNFKPVLAIIQVGNREDSNVYVRMKLKAAKEIGIDAKHIKLPETITEGEL 80 (935)
T ss_pred CcchhhccHHHHHHHHHHHHHHHHHHHhhCCCCCceEEEEEecCcCCcceeehhhhhHHHhcCCceEEecCcccccHHHH
Confidence 457899999999999999999999999887 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCC
Q 017184 161 LKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDI 240 (375)
Q Consensus 161 ~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l 240 (375)
+.+|.+||+|+.||||+||+|||.|+|++.+.++|+|+||||||+..|.|+|..++.++.|+||||.|||++|+++++.+
T Consensus 81 l~~I~~lNeD~tvHGiiVQLPLp~hide~~Vt~aI~peKDVDGf~~~NaG~Lak~~g~p~f~PCTPkGcmeLlk~a~v~v 160 (935)
T KOG4230|consen 81 LREIKALNEDPTVHGIIVQLPLPAHIDEDTVTEAIDPEKDVDGFTRINAGRLAKGEGQPTFIPCTPKGCMELLKEAGVFV 160 (935)
T ss_pred HHHHHhccCCCccceEEEeccCccccchhhHhhccCcccccccccccchhhhhccCCCceeeccChHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVED 320 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~ 320 (375)
.||++||+|||.+||.|++.+|.+.|+|||+|||+|+++.+++.+|||||.|+|.|+||+.||+|||++|||||+|++.|
T Consensus 161 ~Gk~aVVlGRS~IVG~Pia~LL~~~NaTVTiCHSKT~~lae~v~~ADIvIvAiG~PefVKgdWiKpGavVIDvGINyvpD 240 (935)
T KOG4230|consen 161 AGKNAVVLGRSKIVGSPIAALLLWANATVTICHSKTRNLAEKVSRADIVIVAIGQPEFVKGDWIKPGAVVIDVGINYVPD 240 (935)
T ss_pred ccceeEEEecccccCChHHHHHHhcCceEEEecCCCccHHHHhccCCEEEEEcCCcceeecccccCCcEEEEccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017184 321 AKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 372 (375)
Q Consensus 321 ~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 372 (375)
+++..|+|++|||||+++.+++++||||||||||||+||||+|++++++|+.
T Consensus 241 ~~Kksg~klvGDVdfe~Akevas~ITPVPGGVGPMTVAMLmqNtveaAKR~r 292 (935)
T KOG4230|consen 241 PSKKSGFKLVGDVDFESAKEVASFITPVPGGVGPMTVAMLMQNTVEAAKRQR 292 (935)
T ss_pred CCCcccceEeeecchHhhhhhhhccccCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999875
No 34
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.3e-84 Score=631.67 Aligned_cols=287 Identities=56% Similarity=0.913 Sum_probs=272.8
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017184 84 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 163 (375)
Q Consensus 84 a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~ 163 (375)
+++||||++|++|++++|+++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~il~Gk~~a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~ 81 (296)
T PRK14188 2 ATIIDGKAFAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLAL 81 (296)
T ss_pred CEEEEHHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 57899999999999999999999987778999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017184 164 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 243 (375)
Q Consensus 164 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK 243 (375)
|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+++.| .++|+||||+||+++|++|+++++||
T Consensus 82 i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~ai~~ll~~~~i~~~Gk 159 (296)
T PRK14188 82 IARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLHVVNAGRLATG--ETALVPCTPLGCMMLLRRVHGDLSGL 159 (296)
T ss_pred HHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCChhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 57899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 323 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~ 323 (375)
+|+|||||+.||+|+|.+|+++|++|++||++|+++++++++|||||+++|.|++++++|+++|++|||+|+|++.+..+
T Consensus 160 ~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsavg~~~~v~~~~lk~GavVIDvGin~~~~~~~ 239 (296)
T PRK14188 160 NAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAAVGRPEMVKGDWIKPGATVIDVGINRIPAPEK 239 (296)
T ss_pred EEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEecCChhhcchheecCCCEEEEcCCcccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999642111
Q ss_pred CCCc-eeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017184 324 PRGY-RLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 372 (375)
Q Consensus 324 ~~g~-kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 372 (375)
..|+ |++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus 240 ~~g~~~l~GDvd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 289 (296)
T PRK14188 240 GEGKTRLVGDVAFAEAAEVAGAITPVPGGVGPMTIACLLANTLTAACRAA 289 (296)
T ss_pred cCCCceeeCCCCHHHHHhhccEecCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence 1133 799999999999999999999999999999999999999998753
No 35
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=9.9e-81 Score=603.62 Aligned_cols=282 Identities=48% Similarity=0.804 Sum_probs=272.1
Q ss_pred cceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHH
Q 017184 83 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLK 162 (375)
Q Consensus 83 ~a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~ 162 (375)
++++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|+++|+++||+++|+.||++++++||++
T Consensus 2 ~~~~l~gk~~a~~i~~~~~~~i~~~~~~~~~~p~L~~i~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~~l~~ 81 (283)
T PRK14192 2 MALVLDGKALAKQIEEELSVRVEALKAKTGRTPILATILVGDDPASATYVRMKGNACRRVGMDSLKVELPQETTTEQLLA 81 (283)
T ss_pred CCeEeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHH
Confidence 35799999999999999999999999887899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCC
Q 017184 163 HISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKG 242 (375)
Q Consensus 163 ~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~G 242 (375)
.|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|.|+++.| ++.|.||||.|++++|++|+++++|
T Consensus 82 ~i~~Ln~d~~v~Gi~VqlPlp~~i~~~~~ld~I~~aKDVdg~n~~n~G~l~~~--~~~~~p~T~~gii~~L~~~~i~l~G 159 (283)
T PRK14192 82 KIEELNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDGVTCLGFGRMAMG--EAAYGSATPAGIMRLLKAYNIELAG 159 (283)
T ss_pred HHHHHhCCCCCCEEEEeCCCccccCHHHHHhccCHHHhcCCCCccccCccccC--CCcccCCcHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999876 5789999999999999999999999
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAK 322 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~ 322 (375)
|+|+|||||++||+|++++|+++||+||+|||++++|.+.+++|||||+|+|+|++++.+|+++|++|||+|||+.++
T Consensus 160 k~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L~~~~~~aDIvI~AtG~~~~v~~~~lk~gavViDvg~n~~~~-- 237 (283)
T PRK14192 160 KHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNLPELVKQADIIVGAVGKPELIKKDWIKQGAVVVDAGFHPRDG-- 237 (283)
T ss_pred CEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhHHHHhccCCEEEEccCCCCcCCHHHcCCCCEEEEEEEeecCC--
Confidence 999999999988999999999999999999999999999999999999999999999999999999999999999753
Q ss_pred CCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017184 323 SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 373 (375)
Q Consensus 323 ~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 373 (375)
+++|||||+++.++++++|||||||||||++|||+|+++++++.+|
T Consensus 238 -----~~~GDvd~~~~~~~a~~itPvPGGVGp~T~a~L~~n~~~~~~~~~~ 283 (283)
T PRK14192 238 -----GGVGDIELQGIEEIASAYTPVPGGVGPMTINTLIRQTVEAAEKALG 283 (283)
T ss_pred -----CCcccccHHHhhccceEeCCCCCcChHHHHHHHHHHHHHHHHHhcC
Confidence 5899999999999999999999999999999999999999988654
No 36
>KOG0089 consensus Methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase [Coenzyme transport and metabolism]
Probab=100.00 E-value=1.1e-79 Score=582.65 Aligned_cols=293 Identities=62% Similarity=0.935 Sum_probs=282.4
Q ss_pred cceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHH
Q 017184 83 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLK 162 (375)
Q Consensus 83 ~a~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~ 162 (375)
.+.+++||.+|+.+++++..+++.+++..|..|+|+.++||+||+|+.|+.+|.|+|+++||.++.+.||+..+++++++
T Consensus 7 ~~~viagk~~a~~i~~~i~~e~~~~~~~~g~~P~L~~~lvg~~pas~~Ya~~k~kac~~vGi~s~~~~l~~~~~~~~l~~ 86 (309)
T KOG0089|consen 7 TAVVIAGKVAATFIRQEIANEVEGMKESNGKVPGLVGFLVGEDPASQMYATNKTKACEEVGIKSFQYELPESESEDELES 86 (309)
T ss_pred ceEEEehhHHHHHHHHHHHHHHHHHHhcCCCCCceeEEEeCCCcchHHHHHHHHHHHHHhhhcccccccccccCHHHHHH
Confidence 36899999999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCC
Q 017184 163 HISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKG 242 (375)
Q Consensus 163 ~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~G 242 (375)
.|.++|+|++||||+||+|+|.|++++.|++.++|+|||||+|+.|.|+|.+.++.+.|+||||.||+|+|+++++.+.|
T Consensus 87 ~i~~~N~d~sV~GilV~~pv~~h~~eq~i~n~Vs~eKDVDgfh~~Nigrl~ld~~~~~~lPcTP~gv~eiL~r~gI~~~G 166 (309)
T KOG0089|consen 87 AIAEANNDPSVHGILVQLPVPQHIQEQYILNAVSPEKDVDGFHPLNIGRLALDGREPLFLPCTPLGVVEILERTGIETYG 166 (309)
T ss_pred HHHHhcCCCceeeEEEEeeccccccHHHHHhhcCcccccccccccchhhhccccccccccCCchHHHHHHHHHhCCeecC
Confidence 99999999999999999999999999999999999999999999999999887777889999999999999999999999
Q ss_pred CEEEEEcCCcccHHHHHHHHhhC--------CCeEEEEcCCCCC--HHhhccCCcEEEEccCCCCcccCCCcCCCcEEEE
Q 017184 243 KRAVVIGRSNIVGMPAALLLQRE--------DATVSIVHSRTKN--PEEITRQADIIISAVGQPNMVRGSWIKPGAVIID 312 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~--------gAtVtv~hs~t~~--L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVID 312 (375)
|+++|+|||++||+|+|++|++. .||||++||.|++ ++.++++|||+|+|+|.|++|+.||+|+|+.|||
T Consensus 167 Kn~VVigRS~iVg~P~A~LL~~dG~~~~~~~datVti~hr~t~~~~lk~ht~~adivi~a~g~p~li~~d~Ik~Ga~vid 246 (309)
T KOG0089|consen 167 KNAVVIGRSKIVGMPLALLLHNDGAHVYSVDDATVTIFHRYTSKPQLKHHTRDADIVISAVGIPNLITSDMIKPGAAVID 246 (309)
T ss_pred ceEEEEcccccccchHHHHHhhcCCcccccCcceEEEEEcCCCchhHHHHHHhcceeehhcCCCcccccceeecCceeEe
Confidence 99999999999999999999998 6899999999965 5899999999999999999999999999999999
Q ss_pred eeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhccC
Q 017184 313 VGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 375 (375)
Q Consensus 313 vgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~~ 375 (375)
+|+|++.++++..++||+|||||+++.++|++||||||||||||+||||+|+++++++.+.++
T Consensus 247 vgin~v~dp~~a~~~klvgdvdFe~~~~kag~itpVPggvGpmTiAMLl~Ntl~~ak~v~~~~ 309 (309)
T KOG0089|consen 247 VGINRVHDPSTAVGIKLVGDVDFEEASKKAGAITPVPGGVGPMTIAMLLRNTLRAAKRVFLSK 309 (309)
T ss_pred cCCCcccccccceeeEEeeeccHHHhhhhcCccccCCCCCCchhHHHHHHHHHHHHHHHhccC
Confidence 999999998877788999999999999999999999999999999999999999999887653
No 37
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=100.00 E-value=4.1e-53 Score=379.83 Aligned_cols=160 Identities=62% Similarity=1.018 Sum_probs=138.9
Q ss_pred ccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhcc
Q 017184 205 HPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITR 284 (375)
Q Consensus 205 ~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~ 284 (375)
||+|+|+|+.| +++|+||||+|++++|++|+++++||+|+|||||++||+|++++|.++|||||+||++|++++++++
T Consensus 1 hp~N~g~l~~~--~~~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~ 78 (160)
T PF02882_consen 1 HPLNLGRLVSG--QPGFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR 78 (160)
T ss_dssp SHHHHHHHHTT--TTSS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT
T ss_pred CcHhHHHHhCC--CCCCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee
Confidence 79999999987 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHH
Q 017184 285 QADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNT 364 (375)
Q Consensus 285 ~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~ 364 (375)
+|||||+|+|+|++|+++|||||++|||+|+++... +++++|||||++++++++++|||||||||||++|||+|+
T Consensus 79 ~ADIVVsa~G~~~~i~~~~ik~gavVIDvG~~~~~~-----~~~~~GDv~~~~~~~~a~~itPvPgGVGplT~a~L~~N~ 153 (160)
T PF02882_consen 79 RADIVVSAVGKPNLIKADWIKPGAVVIDVGINYVPG-----DGKLVGDVDFESVKEKASAITPVPGGVGPLTVAMLMKNL 153 (160)
T ss_dssp TSSEEEE-SSSTT-B-GGGS-TTEEEEE--CEEETT-----TTEEEESB-HHHHHTTCSEEE-SSSSCHHHHHHHHHHHH
T ss_pred eccEEeeeeccccccccccccCCcEEEecCCccccc-----cceeeecccHHHhhccceEEeeCCCCccHHHHHHHHHHH
Confidence 999999999999999999999999999999999821 239999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 017184 365 LTSAKRV 371 (375)
Q Consensus 365 v~a~~~~ 371 (375)
+++++++
T Consensus 154 v~a~~~~ 160 (160)
T PF02882_consen 154 VKAAKRQ 160 (160)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9999874
No 38
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=100.00 E-value=7e-48 Score=354.53 Aligned_cols=158 Identities=34% Similarity=0.483 Sum_probs=145.2
Q ss_pred cccccCccccchhhhcccCCC-------ccccccCCHHHHHHHHHHhCC---------CCCCCEEEEEcCCcccHHHHHH
Q 017184 197 MEKDVDGFHPLNIGRLAMRGR-------EPLFIPCTPKGCIELLHRYGF---------DIKGKRAVVIGRSNIVGMPAAL 260 (375)
Q Consensus 197 p~KDVDGl~~~N~G~l~~g~~-------~~~~~PcT~~gvi~lL~~~~i---------~l~GK~vvVIGrs~~VGkpla~ 260 (375)
|+|||||+|+.|+|+|+.|.. .++|+||||+||+++|++|++ +++||+|+|||||++||+|+++
T Consensus 1 P~KDVDGl~~~n~g~l~~~~~~~~~~~~~~~~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~ 80 (197)
T cd01079 1 PHKDVEGLSHKYIFNLYHNIRFLDPENRKKSILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAA 80 (197)
T ss_pred CCCCcCCCCHHHHHHHhcCCccccccccCCCccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHH
Confidence 789999999999999987631 158999999999999999977 8999999999999999999999
Q ss_pred HHhhCCCeEEEE---------------cCCC--CC----HHhhccCCcEEEEccCCCCc-ccCCCcCCCcEEEEeeecCC
Q 017184 261 LLQREDATVSIV---------------HSRT--KN----PEEITRQADIIISAVGQPNM-VRGSWIKPGAVIIDVGINPV 318 (375)
Q Consensus 261 lL~~~gAtVtv~---------------hs~t--~~----L~~~l~~ADIVIsAvG~p~~-I~~~~vk~gavVIDvgin~~ 318 (375)
||+++|||||+| |++| +| +.+++++|||||+|+|+|++ |++||||+|++|||||++.
T Consensus 81 lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~~- 159 (197)
T cd01079 81 LLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGVPSPNYKVPTELLKDGAICINFASIK- 159 (197)
T ss_pred HHHHCCCEEEEEecCcccccccccccccccccccchhhHHHHHhhhCCEEEEccCCCCCccCHHHcCCCcEEEEcCCCc-
Confidence 999999999999 6777 46 88999999999999999999 9999999999999999874
Q ss_pred CCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017184 319 EDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 372 (375)
Q Consensus 319 ~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 372 (375)
|+| +++.++|+++||| |||||++|||+|+++++++++
T Consensus 160 -------------dvd-~~v~~~as~iTPv---VGpvTva~L~~Nlv~~~~~~~ 196 (197)
T cd01079 160 -------------NFE-PSVKEKASIYVPS---IGKVTIAMLLRNLLRLYHNQH 196 (197)
T ss_pred -------------Ccc-HhHHhhcCEeCCC---cCHHHHHHHHHHHHHHHHHhc
Confidence 455 6789999999998 999999999999999998765
No 39
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=100.00 E-value=3.9e-41 Score=296.39 Aligned_cols=137 Identities=36% Similarity=0.599 Sum_probs=129.9
Q ss_pred CccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCC
Q 017184 217 REPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQP 296 (375)
Q Consensus 217 ~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p 296 (375)
.++.|+||||+|++++|++|+++++||+|+|+|||..+|+|++.+|.++|++|++||++|+++++++++|||||+|+|+|
T Consensus 3 ~~~~~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~v~~ADIVvsAtg~~ 82 (140)
T cd05212 3 CTPLFVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSKVHDADVVVVGSPKP 82 (140)
T ss_pred CCCcccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEecCCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017184 297 NMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSA 368 (375)
Q Consensus 297 ~~I~~~~vk~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~ 368 (375)
++|+++|+|||++|||+|+++. +|+++.++++++|||||||||||++|||+|+++++
T Consensus 83 ~~i~~~~ikpGa~Vidvg~~~~---------------~~~~~~~~a~~~tPvpgGVGp~T~a~L~~n~~~~~ 139 (140)
T cd05212 83 EKVPTEWIKPGATVINCSPTKL---------------SGDDVKESASLYVPMTGGVGKLTVAMRMQNMVRSV 139 (140)
T ss_pred CccCHHHcCCCCEEEEcCCCcc---------------cchhhHhhceEEcCCCCCchHHHHHHHHHHHHHhc
Confidence 9999999999999999998862 14567889999999999999999999999999875
No 40
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=100.00 E-value=4.9e-41 Score=303.80 Aligned_cols=168 Identities=64% Similarity=1.041 Sum_probs=158.0
Q ss_pred cccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 197 MEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 197 p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
|+|||||++..|.|+++.+ ...|+|||+.+++++++++..+++||+|+|||+|+++|++++.+|.++|++|++++|++
T Consensus 1 ~~kdvdg~~~~~~~~~~~~--~~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~ 78 (168)
T cd01080 1 PEKDVDGLHPVNLGRLALG--RPGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT 78 (168)
T ss_pred CCccccCCCccchhhHhcC--CCCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence 6899999999999999865 57899999999999999999999999999999999889999999999999999999999
Q ss_pred CCHHhhccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHH
Q 017184 277 KNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMT 356 (375)
Q Consensus 277 ~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T 356 (375)
.++.+.+++|||||+|+|+|++|+.+|++++.++||++.+++.+ +.+| |++||+||+.+.+++.++||+||||||+|
T Consensus 79 ~~l~~~l~~aDiVIsat~~~~ii~~~~~~~~~viIDla~prdvd--~~~~-~~~G~~d~~~~~~~~~~~~~~pggvgp~t 155 (168)
T cd01080 79 KNLKEHTKQADIVIVAVGKPGLVKGDMVKPGAVVIDVGINRVPD--KSGG-KLVGDVDFESAKEKASAITPVPGGVGPMT 155 (168)
T ss_pred hhHHHHHhhCCEEEEcCCCCceecHHHccCCeEEEEccCCCccc--ccCC-CeeCCcCHHHHHhhccCcCCCCCcChHHH
Confidence 99999999999999999999999999999999999999999765 2234 89999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 017184 357 IAMLLSNTLTSAK 369 (375)
Q Consensus 357 ~amLl~N~v~a~~ 369 (375)
+++||+|++++++
T Consensus 156 ~a~l~~n~~~~~~ 168 (168)
T cd01080 156 VAMLMKNTVEAAK 168 (168)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998763
No 41
>PF00763 THF_DHG_CYH: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; InterPro: IPR020630 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the N-terminal catalytic domain of these enzymes. ; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 2C2X_B 2C2Y_A 1EDZ_A 1EE9_A 4A26_B 3NGL_C 3NGX_A 1B0A_A 1DIA_A 1A4I_B ....
Probab=100.00 E-value=2.9e-34 Score=245.34 Aligned_cols=117 Identities=56% Similarity=0.905 Sum_probs=103.4
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017184 85 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 164 (375)
Q Consensus 85 ~ildGk~la~~i~~~lk~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I 164 (375)
++|+||++|++|+++++++++.|+++ |++|+|++|+||+|++|..|+++|.|.|+++||+++.+.||++++++|+++.|
T Consensus 1 ~iL~Gk~va~~i~~~l~~~i~~l~~~-~~~P~Laii~vg~d~~S~~Y~~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~i 79 (117)
T PF00763_consen 1 KILDGKPVAKEIKEELKEEIEKLKEK-GITPKLAIILVGDDPASISYVRSKQKAAEKLGIEFELIELPEDISEEELLELI 79 (117)
T ss_dssp EE--HHHHHHHHHHHHHHHHHHHHHC-T---EEEEEEES--HHHHHHHHHHHHHHHHHT-EEEEEEE-TTSSHHHHHHHH
T ss_pred CeeeHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEecCCChhHHHHHHHHHHHHHHcCCceEEEECCCCcCHHHHHHHH
Confidence 48999999999999999999999988 99999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccC
Q 017184 165 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 202 (375)
Q Consensus 165 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVD 202 (375)
++||+|++||||+||+|||+|+++.+++++|+|+||||
T Consensus 80 ~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVD 117 (117)
T PF00763_consen 80 EKLNEDPSVHGILVQLPLPKHIDERKILEAIDPEKDVD 117 (117)
T ss_dssp HHHHH-TT-SEEEEESSSSTTSHHHHHHHTS-GGGBTT
T ss_pred HHHhCCCCCCEEEEcCCCCCCccHHHHHhccCcccCCC
Confidence 99999999999999999999999999999999999998
No 42
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=99.90 E-value=1e-22 Score=197.87 Aligned_cols=225 Identities=16% Similarity=0.168 Sum_probs=172.8
Q ss_pred EEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCC---CCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhC
Q 017184 119 VILVGDRKDSATYVRNKKKACQSVGINSFEVHLPED---TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAV 195 (375)
Q Consensus 119 iI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~---vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I 195 (375)
.-++|+.-+--.-=..-+.+++++|+++.|..|+-+ +++++|.+.++.+.. .++.|++|++|++. ...++++.+
T Consensus 8 ~~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~v~~~~l~~~~~~l~~-~~~~G~nVTiP~K~--~v~~~~D~~ 84 (284)
T PRK12549 8 AGLIGAGIQASLSPAMHEAEGDAQGLRYVYRLIDLDALGLTADALPELLDAAER-MGFAGLNITHPCKQ--AVIPHLDEL 84 (284)
T ss_pred EEEECCCcccccCHHHHHHHHHHcCCCeEEEEEeeccccCCHHHHHHHHHHHHh-cCCCEEEECcCCHH--HHHHHhccC
Confidence 345675433333344667899999999999999632 357889999999875 48999999999987 456778888
Q ss_pred Cc-ccccCccccc-h-hhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEE
Q 017184 196 SM-EKDVDGFHPL-N-IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSI 271 (375)
Q Consensus 196 ~p-~KDVDGl~~~-N-~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv 271 (375)
+| .+.+.+++.+ + -|++. |+++|+ .|+++.|+....++++|+|+|||+|++ |++++..|...|+ +|++
T Consensus 85 ~~~A~~iGAvNTv~~~~g~l~-G~NTD~------~G~~~~l~~~~~~~~~k~vlIlGaGGa-araia~aL~~~G~~~I~I 156 (284)
T PRK12549 85 SDDARALGAVNTVVFRDGRRI-GHNTDW------SGFAESFRRGLPDASLERVVQLGAGGA-GAAVAHALLTLGVERLTI 156 (284)
T ss_pred CHHHHHhCCceEEEecCCEEE-EEcCCH------HHHHHHHHhhccCccCCEEEEECCcHH-HHHHHHHHHHcCCCEEEE
Confidence 88 7777776432 3 34443 554544 999999998777899999999999997 9999999999997 7999
Q ss_pred EcCCCC----------------------CHHhhccCCcEEEEccCC-----CC-cccCCCcCCCcEEEEeeecCCCCCCC
Q 017184 272 VHSRTK----------------------NPEEITRQADIIISAVGQ-----PN-MVRGSWIKPGAVIIDVGINPVEDAKS 323 (375)
Q Consensus 272 ~hs~t~----------------------~L~~~l~~ADIVIsAvG~-----p~-~I~~~~vk~gavVIDvgin~~~~~~~ 323 (375)
++|+.. ++.+.++++|+||++++. +. .++.++++++.+|+|+.|+|.+|
T Consensus 157 ~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~P~~T--- 233 (284)
T PRK12549 157 FDVDPARAAALADELNARFPAARATAGSDLAAALAAADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYFPLET--- 233 (284)
T ss_pred ECCCHHHHHHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeCCCCC---
Confidence 998631 223356789999999642 22 36678899999999999999877
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcc
Q 017184 324 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 374 (375)
Q Consensus 324 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 374 (375)
+|+. .++..|+ ++-+|.+ ||++|.+.+++.|+|.
T Consensus 234 ----~ll~------~A~~~G~--~~~~G~~-----ML~~Qa~~~f~~wtg~ 267 (284)
T PRK12549 234 ----ELLR------AARALGC--RTLDGGG-----MAVFQAVDAFELFTGR 267 (284)
T ss_pred ----HHHH------HHHHCCC--eEecCHH-----HHHHHHHHHHHHhcCC
Confidence 4554 3566776 4566777 9999999999999985
No 43
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=99.89 E-value=2.3e-22 Score=195.59 Aligned_cols=222 Identities=20% Similarity=0.284 Sum_probs=170.7
Q ss_pred EEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCc-c
Q 017184 120 ILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-E 198 (375)
Q Consensus 120 I~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~ 198 (375)
-++|+.-+--.-=..-+.+++++|+++.|..|+ +.+++|.+.++.+.. .++.|++|++|||. ...++++.++| .
T Consensus 13 ~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~~~~-~~~~G~nVT~P~K~--~v~~~ld~~~~~A 87 (289)
T PRK12548 13 GLIGSPVGHSGSPAMYNYSFQKAGLDYAYLAFD--IPVDKVPDAIKAIKT-FNMRGANVTMPCKS--EAAKYMDELSPAA 87 (289)
T ss_pred EEEcCCcccccCHHHHHHHHHHcCCCEEEEEEe--cCHHHHHHHHHHHHH-CCCCEEEECccCHH--HHHHHhhcCCHHH
Confidence 356764322222335677899999999999996 678899999999986 47999999999987 55778888888 6
Q ss_pred cccCccccc-h-hhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCe-EEEEcCC
Q 017184 199 KDVDGFHPL-N-IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSR 275 (375)
Q Consensus 199 KDVDGl~~~-N-~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAt-Vtv~hs~ 275 (375)
+-+.+++.+ + -|++. |+++|+ .|+++.|++++.+++||+++|+|+|++ |++++..|...|+. |++++|+
T Consensus 88 ~~iGavNTi~~~~g~l~-G~NTD~------~G~~~~l~~~~~~~~~k~vlI~GAGGa-grAia~~La~~G~~~V~I~~R~ 159 (289)
T PRK12548 88 RIIGAVNTIVNDDGKLT-GHITDG------LGFVRNLREHGVDVKGKKLTVIGAGGA-ATAIQVQCALDGAKEITIFNIK 159 (289)
T ss_pred HHhCceeEEEeECCEEE-EEecCH------HHHHHHHHhcCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCC
Confidence 776666332 2 34543 555554 999999999888999999999999997 99999999999985 9999886
Q ss_pred C---CC---------------------------HHhhccCCcEEEEccC---CCC----cc-cCCCcCCCcEEEEeeecC
Q 017184 276 T---KN---------------------------PEEITRQADIIISAVG---QPN----MV-RGSWIKPGAVIIDVGINP 317 (375)
Q Consensus 276 t---~~---------------------------L~~~l~~ADIVIsAvG---~p~----~I-~~~~vk~gavVIDvgin~ 317 (375)
. .. +.+.+..+|+||++++ .|+ .+ +.+++.++.+|+|+.|+|
T Consensus 160 ~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P 239 (289)
T PRK12548 160 DDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYNP 239 (289)
T ss_pred chHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCCC
Confidence 3 10 1123356899998885 232 24 456889999999999999
Q ss_pred CCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcc
Q 017184 318 VEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 374 (375)
Q Consensus 318 ~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 374 (375)
.+| +|+. .++..|+ ++-+|.+ ||++|.+++++.|+|.
T Consensus 240 ~~T-------~ll~------~A~~~G~--~~~~G~~-----ML~~Qa~~~f~lwtg~ 276 (289)
T PRK12548 240 KKT-------KLLE------DAEAAGC--KTVGGLG-----MLLWQGAEAYKLYTGK 276 (289)
T ss_pred CCC-------HHHH------HHHHCCC--eeeCcHH-----HHHHHHHHHHHHhcCC
Confidence 877 4655 3566776 5667777 9999999999999985
No 44
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=99.88 E-value=3.2e-22 Score=195.01 Aligned_cols=221 Identities=19% Similarity=0.216 Sum_probs=169.6
Q ss_pred EeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCc-cc
Q 017184 121 LVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EK 199 (375)
Q Consensus 121 ~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~K 199 (375)
++|+.-+--.-=..-+.++++.|+++.|..++ +.+++|.+.++.++.. ++.|++|++|+|. ....+++.+++ .|
T Consensus 12 liG~Pi~hSlSP~ihn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~l~~~-~~~G~nVTiP~K~--~~~~~~D~l~~~A~ 86 (288)
T PRK12749 12 LMAYPIRHSLSPEMQNKALEKAGLPFTYMAFE--VDNDSFPGAIEGLKAL-KMRGTGVSMPNKQ--LACEYVDELTPAAK 86 (288)
T ss_pred EECCCcccccCHHHHHHHHHHcCCCeEEEEEe--cCHHHHHHHHHHHHhc-CCCEEEECcCCHH--HHHHHhccCCHHHH
Confidence 45653322223346688999999999999996 7788999999999764 7999999999987 55678888888 77
Q ss_pred ccCccccc-h-hhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcCCC
Q 017184 200 DVDGFHPL-N-IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT 276 (375)
Q Consensus 200 DVDGl~~~-N-~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs~t 276 (375)
.+.+++.+ + -|++. |+++| ..|+++.|++.+++++||+++|+|+|++ +|+++..|...|+ +|+|++|+.
T Consensus 87 ~iGAVNTv~~~~g~l~-G~NTD------~~Gf~~~l~~~~~~~~~k~vlvlGaGGa-arAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 87 LVGAINTIVNDDGYLR-GYNTD------GTGHIRAIKESGFDIKGKTMVLLGAGGA-STAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred HhCceeEEEccCCEEE-EEecC------HHHHHHHHHhcCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCCc
Confidence 77776433 2 34443 55444 4999999999999999999999999998 9999999999996 899999873
Q ss_pred C------CH-----------------------HhhccCCcEEEEccCC---CC----c-ccCCCcCCCcEEEEeeecCCC
Q 017184 277 K------NP-----------------------EEITRQADIIISAVGQ---PN----M-VRGSWIKPGAVIIDVGINPVE 319 (375)
Q Consensus 277 ~------~L-----------------------~~~l~~ADIVIsAvG~---p~----~-I~~~~vk~gavVIDvgin~~~ 319 (375)
. .| .+.++++|+||++++. |+ . ++.++++++.+|+|+.|+|.+
T Consensus 159 ~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~ 238 (288)
T PRK12749 159 EFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHM 238 (288)
T ss_pred cHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEEECCCCCCCCCCCCCCCCcHHHCCCCCEEEEecCCCcc
Confidence 1 01 1134578999998863 32 1 244568899999999999987
Q ss_pred CCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcc
Q 017184 320 DAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 374 (375)
Q Consensus 320 ~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 374 (375)
| +|+. .++..|+ ++-+|.+ ||++|.+++++.|+|.
T Consensus 239 T-------~ll~------~A~~~G~--~~~~Gl~-----ML~~Qa~~~f~lwtg~ 273 (288)
T PRK12749 239 T-------KLLQ------QAQQAGC--KTIDGYG-----MLLWQGAEQFTLWTGK 273 (288)
T ss_pred C-------HHHH------HHHHCCC--eEECCHH-----HHHHHHHHHHHHhcCC
Confidence 7 4665 3566776 4556676 9999999999999985
No 45
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=99.88 E-value=3e-22 Score=193.42 Aligned_cols=208 Identities=19% Similarity=0.291 Sum_probs=166.2
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCccccc-h-hh
Q 017184 134 NKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGFHPL-N-IG 210 (375)
Q Consensus 134 ~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDGl~~~-N-~G 210 (375)
.-+.+++++|+++.|..|. +.+++|.+.++.+... ++.|++|++|++. +..++++.++| .+.+..++.+ + -|
T Consensus 23 ~hn~~~~~~gl~~~y~~~~--v~~~~l~~~~~~~~~~-~~~G~nVT~P~K~--~~~~~~d~~~~~A~~igavNtv~~~~g 97 (278)
T PRK00258 23 IHNAAFKQLGLDGVYLAIL--VPPEDLEDAVKGFFAL-GGRGANVTVPFKE--AAFALADELSERARLIGAVNTLVLEDG 97 (278)
T ss_pred HHHHHHHHcCCCcEEEEEe--cCHHHHHHHHHHHHhC-CCCEEEECcCCHH--HHHHHhhcCCHHHHHhCCceEEEeeCC
Confidence 4588999999999999985 6778999999999875 7999999999987 55778888888 7777776433 3 23
Q ss_pred hcccCCCccccccCCHHHHHHHHHH-hCCCCCCCEEEEEcCCcccHHHHHHHHhhCC-CeEEEEcCCCCC----------
Q 017184 211 RLAMRGREPLFIPCTPKGCIELLHR-YGFDIKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRTKN---------- 278 (375)
Q Consensus 211 ~l~~g~~~~~~~PcT~~gvi~lL~~-~~i~l~GK~vvVIGrs~~VGkpla~lL~~~g-AtVtv~hs~t~~---------- 278 (375)
++. |+ +++..|+++.|++ .+.++++|+|+|+|+|++ |+.++..|...| ++|++++|+...
T Consensus 98 ~l~-G~------NTD~~G~~~~l~~~~~~~~~~k~vlVlGaGg~-a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~ 169 (278)
T PRK00258 98 RLI-GD------NTDGIGFVRALEERLGVDLKGKRILILGAGGA-ARAVILPLLDLGVAEITIVNRTVERAEELAKLFGA 169 (278)
T ss_pred EEE-EE------cccHHHHHHHHHhccCCCCCCCEEEEEcCcHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhh
Confidence 333 44 4455999999986 578999999999999996 999999999999 689999986321
Q ss_pred ---------HHhhccCCcEEEEccCCCC-------cccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchhhhhhhc
Q 017184 279 ---------PEEITRQADIIISAVGQPN-------MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVA 342 (375)
Q Consensus 279 ---------L~~~l~~ADIVIsAvG~p~-------~I~~~~vk~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a 342 (375)
+.+.+.++||||++++... .+..++++++.+|+|+.|+|.++ .|.. .+++.
T Consensus 170 ~~~~~~~~~~~~~~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~T-------~ll~------~A~~~ 236 (278)
T PRK00258 170 LGKAELDLELQEELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPT-------PFLA------WAKAQ 236 (278)
T ss_pred ccceeecccchhccccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCCC-------HHHH------HHHHC
Confidence 1234578999999997431 24557899999999999999766 3443 36677
Q ss_pred ceeccCCCCccHHHHHHHHHHHHHHHHHHhcc
Q 017184 343 SAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 374 (375)
Q Consensus 343 ~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 374 (375)
|+ ++-+|.+ ||++|.+.+++.|+|.
T Consensus 237 G~--~~~~G~~-----Ml~~Qa~~~f~~wtg~ 261 (278)
T PRK00258 237 GA--RTIDGLG-----MLVHQAAEAFELWTGV 261 (278)
T ss_pred cC--eecCCHH-----HHHHHHHHHHHHHcCC
Confidence 87 5667777 9999999999999985
No 46
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=99.88 E-value=8.6e-22 Score=190.63 Aligned_cols=225 Identities=14% Similarity=0.156 Sum_probs=172.8
Q ss_pred CCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHH
Q 017184 112 GVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSI 191 (375)
Q Consensus 112 g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i 191 (375)
+..++|..=++|+. -|.+-. .-+.+++++|+++.|..|+ .++|.+.++.+... ++.|++|++|+++ ....+
T Consensus 6 ~~~~~~~~gliG~P-~~~Sp~-ihn~~f~~~gl~~~Y~~~~----~~~l~~~~~~l~~~-~~~G~nVT~P~K~--~~~~~ 76 (272)
T PRK12550 6 NKDTQLCISLAARP-SNFGTR-FHNYLYEALGLNFLYKAFT----TTDLTAAIGGVRAL-GIRGCAVSMPFKE--AVIPL 76 (272)
T ss_pred CCCceEEEEEEccc-hhcCHH-HHHHHHHHcCCCcEEEecC----HhHHHHHHHHHHhc-CCCEEEECcCCHH--HHHHH
Confidence 34567655667864 566655 7889999999999999995 46788888888763 7999999999987 55778
Q ss_pred HhhCCc-ccccCccccc-h-hhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCC-
Q 017184 192 LNAVSM-EKDVDGFHPL-N-IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA- 267 (375)
Q Consensus 192 ~~~I~p-~KDVDGl~~~-N-~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gA- 267 (375)
++.++| .+.+.+++.+ + -|++. |++ ++..|+++.|++.+.+ .+|+|+|+|+|++ +|+++..|...|+
T Consensus 77 lD~l~~~A~~iGAVNTi~~~~g~l~-G~N------TD~~Gf~~~L~~~~~~-~~~~vlilGaGGa-arAi~~aL~~~g~~ 147 (272)
T PRK12550 77 VDELDPSAQAIESVNTIVNTDGHLK-AYN------TDYIAIAKLLASYQVP-PDLVVALRGSGGM-AKAVAAALRDAGFT 147 (272)
T ss_pred hhcCCHHHHHhCCeeEEEeeCCEEE-EEe------cCHHHHHHHHHhcCCC-CCCeEEEECCcHH-HHHHHHHHHHCCCC
Confidence 888888 7777766332 3 23443 444 4559999999988875 4789999999998 9999999999997
Q ss_pred eEEEEcCCCCC---HH--------hh--ccCCcEEEEccC---CCC------cccCCCcCCCcEEEEeeecCCCCCCCCC
Q 017184 268 TVSIVHSRTKN---PE--------EI--TRQADIIISAVG---QPN------MVRGSWIKPGAVIIDVGINPVEDAKSPR 325 (375)
Q Consensus 268 tVtv~hs~t~~---L~--------~~--l~~ADIVIsAvG---~p~------~I~~~~vk~gavVIDvgin~~~~~~~~~ 325 (375)
+|+|++|+.+. +. +. ...+|+||+|++ .++ .++.++++++.+|+|+.|+|.+|
T Consensus 148 ~i~i~nR~~~~a~~la~~~~~~~~~~~~~~~~dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~P~~T----- 222 (272)
T PRK12550 148 DGTIVARNEKTGKALAELYGYEWRPDLGGIEADILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVALPAET----- 222 (272)
T ss_pred EEEEEeCCHHHHHHHHHHhCCcchhhcccccCCEEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecCCccC-----
Confidence 69999997421 11 11 145899999986 221 26677899999999999999877
Q ss_pred CceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcc
Q 017184 326 GYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 374 (375)
Q Consensus 326 g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 374 (375)
+|.. .++..|+ ++-+|.+ ||++|.+++++.|+|.
T Consensus 223 --~ll~------~A~~~G~--~~i~Gl~-----MLi~Qa~~~f~lwtg~ 256 (272)
T PRK12550 223 --PLIR------YARARGK--TVITGAE-----VIALQAVEQFVLYTGV 256 (272)
T ss_pred --HHHH------HHHHCcC--eEeCCHH-----HHHHHHHHHHHHHhCC
Confidence 4554 3566776 4557777 9999999999999985
No 47
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=99.88 E-value=1.3e-21 Score=189.72 Aligned_cols=223 Identities=16% Similarity=0.215 Sum_probs=167.8
Q ss_pred EEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCc-
Q 017184 119 VILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM- 197 (375)
Q Consensus 119 iI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p- 197 (375)
.-++|+.-+.-.-=..-+.+++++|+++.|+.++. .+.++|.+.++.+.. ++.|++|++|||. ...++++.++|
T Consensus 8 ~~liG~Pi~hS~SP~ihn~~f~~~gl~~~y~~~~~-~~~~~l~~~~~~~~~--~~~G~nVT~P~K~--~~~~~~d~~~~~ 82 (282)
T TIGR01809 8 AFIIGKPIAHSRSPHLHNAGYEILGLPDKTYEFET-CSAEELKEVLSGFGP--QFGGASVTIPLKF--AILRFADEHTDR 82 (282)
T ss_pred EEEEcCCchhccCHHHHHHHHHHcCCCcEEEeeec-CCHHHHHHHHHhcCC--CCcEEEECCCCHH--HHHHHhhcCCHH
Confidence 44677543222223356778999999999999963 245789999998843 7999999999987 55678888888
Q ss_pred ccccCccccc-h--hhhcccCCCccccccCCHHHHHHHHHHhCC--CCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEE
Q 017184 198 EKDVDGFHPL-N--IGRLAMRGREPLFIPCTPKGCIELLHRYGF--DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSI 271 (375)
Q Consensus 198 ~KDVDGl~~~-N--~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i--~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv 271 (375)
.|-+..++.+ + -|++. |+++|+ .|+++.|++.+. +++||+|+|||+|++ ||+++..|...|+ +|+|
T Consensus 83 A~~iGAVNTv~~~~~g~l~-G~NTD~------~G~~~~l~~~~~~~~~~~k~vlvlGaGGa-arai~~aL~~~G~~~i~I 154 (282)
T TIGR01809 83 ASLIGSVNTLLRTQNGIWK-GDNTDW------DGIAGALANIGKFEPLAGFRGLVIGAGGT-SRAAVYALASLGVTDITV 154 (282)
T ss_pred HHHhCceeEEEEcCCCcEE-EecCCH------HHHHHHHHhhCCccccCCceEEEEcCcHH-HHHHHHHHHHcCCCeEEE
Confidence 7777776433 3 24443 555555 999999998874 689999999999997 9999999999997 7999
Q ss_pred EcCCCC----------------------CHHhhccCCcEEEEccCCCCcccCCC------------cCCCcEEEEeeecC
Q 017184 272 VHSRTK----------------------NPEEITRQADIIISAVGQPNMVRGSW------------IKPGAVIIDVGINP 317 (375)
Q Consensus 272 ~hs~t~----------------------~L~~~l~~ADIVIsAvG~p~~I~~~~------------vk~gavVIDvgin~ 317 (375)
++|+.. ++.+.+.++|+||++++....++.+. +.++.+|+|+.|+|
T Consensus 155 ~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g~~~~~~~l~~~~~~~~~~~~~~~~~v~D~vY~P 234 (282)
T TIGR01809 155 INRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPADVPADYVDLFATVPFLLLKRKSSEGIFLDAAYDP 234 (282)
T ss_pred EeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCCCCCCHHHhhhhhhhhccccCCCCcEEEEEeeCC
Confidence 998621 12234577899999998654343322 34678999999999
Q ss_pred CCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcc
Q 017184 318 VEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 374 (375)
Q Consensus 318 ~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 374 (375)
.+| .|+. .++.+|+ ++-+|.+ ||++|.+.+++.|+|.
T Consensus 235 ~~T-------~ll~------~A~~~G~--~~~~Gl~-----MLv~Qa~~~f~lwtg~ 271 (282)
T TIGR01809 235 WPT-------PLVA------IVSAAGW--RVISGLQ-----MLLHQGFAQFEQWTGM 271 (282)
T ss_pred CCC-------HHHH------HHHHCCC--EEECcHH-----HHHHHHHHHHHHHHCC
Confidence 877 4554 3566776 4556777 9999999999999985
No 48
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=99.88 E-value=6.2e-22 Score=192.63 Aligned_cols=209 Identities=20% Similarity=0.333 Sum_probs=167.0
Q ss_pred HHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCcc-ccchh-
Q 017184 133 RNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGF-HPLNI- 209 (375)
Q Consensus 133 ~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDGl-~~~N~- 209 (375)
..-+.+++++|+++.|..|. +..++|.+.|+.+. +..+.|++|++|+++ ....+++.+++ .+-+..+ |.++.
T Consensus 23 ~~Hn~~~~~lGl~~~Y~a~~--v~~~~l~~~v~~~~-~~g~~G~NVTiP~Ke--~~~~~lD~l~~~A~~iGAVNTl~~~~ 97 (283)
T COG0169 23 RMHNAAFRALGLDYVYLAFE--VPPEDLPEAVSGIR-ALGFRGLNVTIPFKE--AALPLLDELSPRARLIGAVNTLVRED 97 (283)
T ss_pred HHHHHHHHHcCCCceEEEee--cCHHHHHHHHHHHH-hcCCCeeEECCccHH--HHHHHHhcCCHHHHHhCCceEEEEcc
Confidence 35678999999999999996 56899999999998 578999999999997 56778888988 7777666 33444
Q ss_pred -hhcccCCCccccccCCHHHHHHHHHHhC--CCCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcCCCCC---HH--
Q 017184 210 -GRLAMRGREPLFIPCTPKGCIELLHRYG--FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRTKN---PE-- 280 (375)
Q Consensus 210 -G~l~~g~~~~~~~PcT~~gvi~lL~~~~--i~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs~t~~---L~-- 280 (375)
|++. |+++|+ .|+.+.|++++ .+.+||+|+|+|+||+ +|+++..|++.|+ +|+|+||+... |.
T Consensus 98 ~g~l~-G~NTD~------~G~~~~L~~~~~~~~~~~~~vlilGAGGA-arAv~~aL~~~g~~~i~V~NRt~~ra~~La~~ 169 (283)
T COG0169 98 DGKLR-GYNTDG------IGFLRALKEFGLPVDVTGKRVLILGAGGA-ARAVAFALAEAGAKRITVVNRTRERAEELADL 169 (283)
T ss_pred CCEEE-EEcCCH------HHHHHHHHhcCCCcccCCCEEEEECCcHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Confidence 5554 666665 99999999987 5677999999999998 9999999999995 79999997421 11
Q ss_pred ----------------hhccCCcEEEEccCC---CC----cccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchhh
Q 017184 281 ----------------EITRQADIIISAVGQ---PN----MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEE 337 (375)
Q Consensus 281 ----------------~~l~~ADIVIsAvG~---p~----~I~~~~vk~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~ 337 (375)
+...++|+||++|+. ++ +++.+.++++.+|+|+.|+|.+| +|+-
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T-------plL~------ 236 (283)
T COG0169 170 FGELGAAVEAAALADLEGLEEADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLET-------PLLR------ 236 (283)
T ss_pred hhhcccccccccccccccccccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCC-------HHHH------
Confidence 111159999999872 22 35568899999999999999988 4554
Q ss_pred hhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcc
Q 017184 338 ACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 374 (375)
Q Consensus 338 v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 374 (375)
.++..|+. +-.|.| ||+.|.+++|+.|+|+
T Consensus 237 ~A~~~G~~--~idGl~-----Mlv~Qaa~aF~lwtg~ 266 (283)
T COG0169 237 EARAQGAK--TIDGLG-----MLVHQAAEAFELWTGV 266 (283)
T ss_pred HHHHcCCe--EECcHH-----HHHHHHHHHHHHHhCC
Confidence 35566664 445676 9999999999999986
No 49
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=99.87 E-value=1.2e-21 Score=190.62 Aligned_cols=222 Identities=14% Similarity=0.148 Sum_probs=170.5
Q ss_pred eCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCC---CCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCc-
Q 017184 122 VGDRKDSATYVRNKKKACQSVGINSFEVHLPED---TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM- 197 (375)
Q Consensus 122 vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~---vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p- 197 (375)
+|+.-+.-..=..-+.++++.|+++.|..|+-. +++++|.+.++.+... ++.|++|++|+|. ....+++.++|
T Consensus 10 iG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~~~~~~l~~~~~~~~~~-~~~G~nVT~P~K~--~~~~~lD~l~~~ 86 (283)
T PRK14027 10 IGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYL-GFNGLNITHPYKQ--AVLPLLDEVSEQ 86 (283)
T ss_pred ECCCccccCCHHHHHHHHHHcCCCeEEEEEecccccCCHHHHHHHHHHHHhc-CCCEEEECccCHH--HHHHHhhhCCHH
Confidence 454322222234567889999999999999622 3467899999998764 8999999999987 56778888988
Q ss_pred ccccCccccc-h--hhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEc
Q 017184 198 EKDVDGFHPL-N--IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVH 273 (375)
Q Consensus 198 ~KDVDGl~~~-N--~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~h 273 (375)
.+.+..++.+ + -|++. |+++|+ .|+++.|++.+.+++||+|+|+|+|++ ||+++..|...|+ +|+|++
T Consensus 87 A~~iGAVNTv~~~~~g~l~-G~NTD~------~Gf~~~L~~~~~~~~~k~vlilGaGGa-arAi~~aL~~~g~~~i~i~n 158 (283)
T PRK14027 87 ATQLGAVNTVVIDATGHTT-GHNTDV------SGFGRGMEEGLPNAKLDSVVQVGAGGV-GNAVAYALVTHGVQKLQVAD 158 (283)
T ss_pred HHHhCCceEEEECCCCcEE-EEcCCH------HHHHHHHHhcCcCcCCCeEEEECCcHH-HHHHHHHHHHCCCCEEEEEc
Confidence 8888777543 3 35544 665665 999999998767889999999999997 9999999999996 799999
Q ss_pred CCCC---CH---------------------HhhccCCcEEEEccCC---CC---cccCCCcCCCcEEEEeeecCCCCCCC
Q 017184 274 SRTK---NP---------------------EEITRQADIIISAVGQ---PN---MVRGSWIKPGAVIIDVGINPVEDAKS 323 (375)
Q Consensus 274 s~t~---~L---------------------~~~l~~ADIVIsAvG~---p~---~I~~~~vk~gavVIDvgin~~~~~~~ 323 (375)
|+.. .| .+.+.++|+||++++. ++ .++.+++.++.+|+|+.|+|.+|
T Consensus 159 R~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaTp~Gm~~~~~~~~~~~~l~~~~~v~D~vY~P~~T--- 235 (283)
T PRK14027 159 LDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIET--- 235 (283)
T ss_pred CCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcCCCCCCCCCCCCCCHHHcCCCcEEEEcccCCCCC---
Confidence 8631 11 1234568999988862 21 25556788899999999999887
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcc
Q 017184 324 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 374 (375)
Q Consensus 324 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 374 (375)
+|+. .++..|+ ++-+|.+ ||++|.+++++.|+|.
T Consensus 236 ----~ll~------~A~~~G~--~~~~Gl~-----MLv~Qa~~~f~lw~G~ 269 (283)
T PRK14027 236 ----ELLK------AARALGC--ETLDGTR-----MAIHQAVDAFRLFTGL 269 (283)
T ss_pred ----HHHH------HHHHCCC--EEEccHH-----HHHHHHHHHHHHHhCC
Confidence 4665 3566787 4557777 9999999999999985
No 50
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=99.86 E-value=2.1e-21 Score=186.53 Aligned_cols=209 Identities=20% Similarity=0.233 Sum_probs=163.4
Q ss_pred HHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCccccc-h-h
Q 017184 133 RNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGFHPL-N-I 209 (375)
Q Consensus 133 ~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDGl~~~-N-~ 209 (375)
..-+.+++++|+++.|..|+ +.+++|.+.++.++.. ++.|++|++|++. +...+++.+++ .+-+.+++.+ + -
T Consensus 17 ~~hn~~~~~~g~~~~y~~~~--v~~~~l~~~~~~~~~~-~~~G~nVT~P~K~--~~~~~~d~~~~~A~~~gavNti~~~~ 91 (270)
T TIGR00507 17 LIHNAFFKQLGLEGPYIAFL--VPPDDLEDALSGFFAL-GFKGANVTSPFKE--EAFQFLDEIDERAKLAGAVNTLKLED 91 (270)
T ss_pred HHHHHHHHHcCCCcEEEEEe--cCHHHHHHHHHHHHhc-CCCEEEECcCCHH--HHHHHhhhCCHHHHHhCCceEEEeeC
Confidence 35578899999999999996 6778899999999864 7999999999987 55678888888 7777776433 3 2
Q ss_pred hhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCH----------
Q 017184 210 GRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP---------- 279 (375)
Q Consensus 210 G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L---------- 279 (375)
|++. |+ +++..|+++.|++.+...++|+++|+|.|++ |++++..|...|+.|++++|+....
T Consensus 92 g~l~-g~------NTD~~G~~~~l~~~~~~~~~k~vliiGaGg~-g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~ 163 (270)
T TIGR00507 92 GKLV-GY------NTDGIGLVSDLERLIPLRPNQRVLIIGAGGA-ARAVALPLLKADCNVIIANRTVSKAEELAERFQRY 163 (270)
T ss_pred CEEE-EE------cCCHHHHHHHHHhcCCCccCCEEEEEcCcHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc
Confidence 3443 44 4555999999998777788999999999985 9999999999999999998863211
Q ss_pred --------Hh-hccCCcEEEEccCC---CC----cccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchhhhhhhcc
Q 017184 280 --------EE-ITRQADIIISAVGQ---PN----MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVAS 343 (375)
Q Consensus 280 --------~~-~l~~ADIVIsAvG~---p~----~I~~~~vk~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~ 343 (375)
.+ ...++|+||++++. +. .+..++++++.+|+|+.|+|.++ .|. ..++..|
T Consensus 164 ~~~~~~~~~~~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T-------~ll------~~A~~~G 230 (270)
T TIGR00507 164 GEIQAFSMDELPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGET-------PFL------AEAKSLG 230 (270)
T ss_pred CceEEechhhhcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCC-------HHH------HHHHHCC
Confidence 11 22578999999985 22 23456789999999999998765 333 3356667
Q ss_pred eeccCCCCccHHHHHHHHHHHHHHHHHHhcc
Q 017184 344 AITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 374 (375)
Q Consensus 344 ~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 374 (375)
+ ++-.|.+ ||++|.+.+++.|+|.
T Consensus 231 ~--~~vdG~~-----Ml~~Qa~~~f~~w~g~ 254 (270)
T TIGR00507 231 T--KTIDGLG-----MLVAQAALAFELWTGV 254 (270)
T ss_pred C--eeeCCHH-----HHHHHHHHHHHHHcCC
Confidence 6 4556777 9999999999999985
No 51
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=99.81 E-value=3.3e-19 Score=186.73 Aligned_cols=221 Identities=21% Similarity=0.306 Sum_probs=167.8
Q ss_pred EEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCc-
Q 017184 119 VILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM- 197 (375)
Q Consensus 119 iI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p- 197 (375)
.-++|+.-+--.-=..-+.+++++|+++.|..|+ + ++|.+.++.++. +++.|++|++|++. ....+++.++|
T Consensus 255 ~~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~--v--~~l~~~~~~l~~-~~~~G~nVTiP~K~--~v~~~lD~~~~~ 327 (529)
T PLN02520 255 YGIIGKPVGHSKSPILHNEAFKSVGFNGVYVHLL--V--DDLAKFLQTYSS-PDFAGFSCTIPHKE--DALKCCDEVDPI 327 (529)
T ss_pred EEEEcCCcccccCHHHHHHHHHHCCCCcEEEEee--h--hhHHHHHHHHhh-CCCCEEEECcCCHH--HHHHHhccCCHH
Confidence 3367864333333346688999999999999996 3 467778887765 57999999999987 55778888888
Q ss_pred ccccCccccc-h---hhhcccCCCccccccCCHHHHHHHHHHh----------CCCCCCCEEEEEcCCcccHHHHHHHHh
Q 017184 198 EKDVDGFHPL-N---IGRLAMRGREPLFIPCTPKGCIELLHRY----------GFDIKGKRAVVIGRSNIVGMPAALLLQ 263 (375)
Q Consensus 198 ~KDVDGl~~~-N---~G~l~~g~~~~~~~PcT~~gvi~lL~~~----------~i~l~GK~vvVIGrs~~VGkpla~lL~ 263 (375)
.+.+.+++.+ + -|++. |+|+|+ .|+++.|++. +.+++||+|+|+|+|++ |++++..|.
T Consensus 328 A~~iGAVNTvv~~~~~g~l~-G~NTD~------~G~~~~l~~~~~~~~~~~~~~~~~~~k~vlIlGaGGa-grAia~~L~ 399 (529)
T PLN02520 328 AKSIGAINTIIRRPSDGKLV-GYNTDY------IGAISAIEDGLRASGSSPASGSPLAGKLFVVIGAGGA-GKALAYGAK 399 (529)
T ss_pred HHHhCCceEEEEeCCCCEEE-EEcccH------HHHHHHHHhhhcccccccccccCCCCCEEEEECCcHH-HHHHHHHHH
Confidence 8888777543 3 25553 655555 9999999852 56789999999999987 999999999
Q ss_pred hCCCeEEEEcCCCCC---H--------------Hhh-ccCCcEEEEccC---CCC----cccCCCcCCCcEEEEeeecCC
Q 017184 264 REDATVSIVHSRTKN---P--------------EEI-TRQADIIISAVG---QPN----MVRGSWIKPGAVIIDVGINPV 318 (375)
Q Consensus 264 ~~gAtVtv~hs~t~~---L--------------~~~-l~~ADIVIsAvG---~p~----~I~~~~vk~gavVIDvgin~~ 318 (375)
++|++|++++|+.+. + .+. ...+||||++++ .|+ .++.++++++.+|+|+.|+|.
T Consensus 400 ~~G~~V~i~nR~~e~a~~la~~l~~~~~~~~~~~~~~~~~~diiINtT~vGm~~~~~~~pl~~~~l~~~~~v~D~vY~P~ 479 (529)
T PLN02520 400 EKGARVVIANRTYERAKELADAVGGQALTLADLENFHPEEGMILANTTSVGMQPNVDETPISKHALKHYSLVFDAVYTPK 479 (529)
T ss_pred HCCCEEEEEcCCHHHHHHHHHHhCCceeeHhHhhhhccccCeEEEecccCCCCCCCCCCcccHhhCCCCCEEEEeccCCC
Confidence 999999999886321 1 111 135789997775 232 256678999999999999998
Q ss_pred CCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcc
Q 017184 319 EDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 374 (375)
Q Consensus 319 ~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 374 (375)
+| .|+. .++.+|+ ++-+|.+ ||++|.+.+++.|+|.
T Consensus 480 ~T-------~ll~------~A~~~G~--~~~~Gl~-----MLv~Qa~~~f~lwtg~ 515 (529)
T PLN02520 480 IT-------RLLR------EAEESGA--IIVSGTE-----MFIRQAYEQFERFTGL 515 (529)
T ss_pred cC-------HHHH------HHHHCCC--eEeCcHH-----HHHHHHHHHHHHHhCC
Confidence 87 4554 3566787 4556776 9999999999999985
No 52
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=99.79 E-value=4.3e-19 Score=183.82 Aligned_cols=219 Identities=18% Similarity=0.236 Sum_probs=166.9
Q ss_pred EEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCc-c
Q 017184 120 ILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-E 198 (375)
Q Consensus 120 I~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~ 198 (375)
-.+|+.-+--.-=..-+.+++++|+++.|..|+ +.++++.+.++.+.. +++.|++|++|++. ....+++.++| .
T Consensus 219 ~liG~pi~hS~SP~~hn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~~~~-~~~~G~nVT~P~K~--~v~~~~d~~~~~A 293 (477)
T PRK09310 219 GLIGDPVDRSISHLSHNPLFSQLSLNCPYIKLP--LTPQELPKFFSTIRD-LPFLGLSVTMPLKT--AVLDFLDKLDPSV 293 (477)
T ss_pred EEECCCcccccCHHHHHHHHHHcCCCcEEEEee--cCHHHHHHHHHHHHh-CCCCEEEECccCHH--HHHHHhccCCHHH
Confidence 367864333333345688999999999999996 677888888888876 47999999999987 55678888888 7
Q ss_pred cccCccccc-h-hhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 199 KDVDGFHPL-N-IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 199 KDVDGl~~~-N-~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
+-+.+++.+ + -|++. |+|+|+ .|+++.|++.+.+++||+++|+|.|++ |++++..|.+.|++|++++++.
T Consensus 294 ~~iGAVNTv~~~~g~l~-G~NTD~------~G~~~~l~~~~~~~~~k~vlIiGaGgi-G~aia~~L~~~G~~V~i~~R~~ 365 (477)
T PRK09310 294 KLCGSCNTLVFRNGKIE-GYNTDG------EGLFSLLKQKNIPLNNQHVAIVGAGGA-AKAIATTLARAGAELLIFNRTK 365 (477)
T ss_pred HHhCcceEEEeeCCEEE-EEecCH------HHHHHHHHhcCCCcCCCEEEEEcCcHH-HHHHHHHHHHCCCEEEEEeCCH
Confidence 777776443 3 34554 555555 999999999999999999999999986 9999999999999999998763
Q ss_pred CCHH--------------h--hccCCcEEEEccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchhhhhh
Q 017184 277 KNPE--------------E--ITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACE 340 (375)
Q Consensus 277 ~~L~--------------~--~l~~ADIVIsAvG~p~~I~~~~vk~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~ 340 (375)
...+ + .+.++|+||++++..-.+.. .+. .+|+|+.|+|.++ .|. ..++
T Consensus 366 ~~~~~la~~~~~~~~~~~~~~~l~~~DiVInatP~g~~~~~-~l~--~~v~D~~Y~P~~T-------~ll------~~A~ 429 (477)
T PRK09310 366 AHAEALASRCQGKAFPLESLPELHRIDIIINCLPPSVTIPK-AFP--PCVVDINTLPKHS-------PYT------QYAR 429 (477)
T ss_pred HHHHHHHHHhccceechhHhcccCCCCEEEEcCCCCCcchh-HHh--hhEEeccCCCCCC-------HHH------HHHH
Confidence 2111 1 14678999999975433432 333 3899999999776 344 3356
Q ss_pred hcceeccCCCCccHHHHHHHHHHHHHHHHHHhcc
Q 017184 341 VASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 374 (375)
Q Consensus 341 ~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 374 (375)
..|+ ++-+|.+ ||+.|.+++++.|+|-
T Consensus 430 ~~G~--~~~~G~~-----Ml~~Qa~~~f~lw~g~ 456 (477)
T PRK09310 430 SQGS--SIIYGYE-----MFAEQALLQFRLWFPT 456 (477)
T ss_pred HCcC--EEECcHH-----HHHHHHHHHHHHHcCC
Confidence 6776 4556777 9999999999999975
No 53
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=99.60 E-value=5.1e-15 Score=144.83 Aligned_cols=131 Identities=26% Similarity=0.366 Sum_probs=106.4
Q ss_pred CCHHH-HHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC----------------CHHhhccCC
Q 017184 224 CTPKG-CIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------------NPEEITRQA 286 (375)
Q Consensus 224 cT~~g-vi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~----------------~L~~~l~~A 286 (375)
.|+.+ +.+.++++++++.|++|+|||.|.+ |++++..|.+.|++|++++++.. ++.+.++++
T Consensus 133 ~~aegav~~a~~~~~~~l~g~kvlViG~G~i-G~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l~~a 211 (296)
T PRK08306 133 PTAEGAIMMAIEHTPITIHGSNVLVLGFGRT-GMTLARTLKALGANVTVGARKSAHLARITEMGLSPFHLSELAEEVGKI 211 (296)
T ss_pred hHHHHHHHHHHHhCCCCCCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHhCCC
Confidence 34455 5677888899999999999999985 99999999999999999988742 456788999
Q ss_pred cEEEEccCCCCcccCC---CcCCCcEEEEeeecCCCCCCCCCCceeecccchhhhhhh---cceeccCCCCccHHHHHHH
Q 017184 287 DIIISAVGQPNMVRGS---WIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEV---ASAITPVPGGVGPMTIAML 360 (375)
Q Consensus 287 DIVIsAvG~p~~I~~~---~vk~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~---a~~iTPVPGGVGp~T~amL 360 (375)
|+||++++.+ +++.+ ++++|++|||+++++ |++||+.+.+. +-+.+++||+|+|+|.+.+
T Consensus 212 DiVI~t~p~~-~i~~~~l~~~~~g~vIIDla~~p-------------ggtd~~~a~~~Gv~~~~~~~lpg~vap~ta~~~ 277 (296)
T PRK08306 212 DIIFNTIPAL-VLTKEVLSKMPPEALIIDLASKP-------------GGTDFEYAEKRGIKALLAPGLPGKVAPKTAGQI 277 (296)
T ss_pred CEEEECCChh-hhhHHHHHcCCCCcEEEEEccCC-------------CCcCeeehhhCCeEEEEECCCCccCCHHHHHHH
Confidence 9999998643 46655 468999999999876 45677554443 4456999999999999999
Q ss_pred HHHHHHHHH
Q 017184 361 LSNTLTSAK 369 (375)
Q Consensus 361 l~N~v~a~~ 369 (375)
+.|.+..+-
T Consensus 278 ~~~~i~~~l 286 (296)
T PRK08306 278 LANVLSQLL 286 (296)
T ss_pred HHHHHHHHH
Confidence 999997763
No 54
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=99.50 E-value=8.8e-14 Score=135.75 Aligned_cols=129 Identities=27% Similarity=0.409 Sum_probs=102.6
Q ss_pred CCHHHH-HHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC----------------CHHhhccCC
Q 017184 224 CTPKGC-IELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------------NPEEITRQA 286 (375)
Q Consensus 224 cT~~gv-i~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~----------------~L~~~l~~A 286 (375)
+|+++. ..+++.++++++||+++|+|.|++ |+.++..|...|++|++++|+.. ++.+.++++
T Consensus 132 ~~Ae~ai~~al~~~~~~l~gk~v~IiG~G~i-G~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l~~a 210 (287)
T TIGR02853 132 PTAEGAIMMAIEHTDFTIHGSNVMVLGFGRT-GMTIARTFSALGARVFVGARSSADLARITEMGLIPFPLNKLEEKVAEI 210 (287)
T ss_pred hHHHHHHHHHHHhcCCCCCCCEEEEEcChHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeeecHHHHHHHhccC
Confidence 556655 566777889999999999999996 99999999999999999988642 356778999
Q ss_pred cEEEEccCCCCcccC---CCcCCCcEEEEeeecCCCCCCCCCCceeecccchhhhhhhcc---eecc-CCCCccHHHHHH
Q 017184 287 DIIISAVGQPNMVRG---SWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVAS---AITP-VPGGVGPMTIAM 359 (375)
Q Consensus 287 DIVIsAvG~p~~I~~---~~vk~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~---~iTP-VPGGVGp~T~am 359 (375)
|+||++++.+ +++. +.+++++++||++++| |.+||+. +++.| ...| .||.|+|.|.+.
T Consensus 211 DiVint~P~~-ii~~~~l~~~k~~aliIDlas~P-------------g~tdf~~-Ak~~G~~a~~~~glPg~~ap~ta~~ 275 (287)
T TIGR02853 211 DIVINTIPAL-VLTADVLSKLPKHAVIIDLASKP-------------GGTDFEY-AKKRGIKALLAPGLPGIVAPKTAGK 275 (287)
T ss_pred CEEEECCChH-HhCHHHHhcCCCCeEEEEeCcCC-------------CCCCHHH-HHHCCCEEEEeCCCCcccCchhHHH
Confidence 9999998754 4444 3578999999999876 4567744 55544 2234 899999999999
Q ss_pred HHHHHHHHH
Q 017184 360 LLSNTLTSA 368 (375)
Q Consensus 360 Ll~N~v~a~ 368 (375)
++.|++...
T Consensus 276 i~~~~~~~~ 284 (287)
T TIGR02853 276 ILANVLSEL 284 (287)
T ss_pred HHHHHHHHH
Confidence 999998653
No 55
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=99.16 E-value=2.8e-11 Score=105.35 Aligned_cols=89 Identities=29% Similarity=0.372 Sum_probs=71.0
Q ss_pred HHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCe-EEEEcCCC--------------------CCHHhhccCCcEE
Q 017184 231 ELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSRT--------------------KNPEEITRQADII 289 (375)
Q Consensus 231 ~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAt-Vtv~hs~t--------------------~~L~~~l~~ADIV 289 (375)
|+.++...+++||+++|||+|++ |++++..|..+|++ |++++|+. .++.+.+.++|+|
T Consensus 1 ~la~~~~~~l~~~~vlviGaGg~-ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~Div 79 (135)
T PF01488_consen 1 ELAKKKFGDLKGKRVLVIGAGGA-ARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIV 79 (135)
T ss_dssp HHHCTHHSTGTTSEEEEESSSHH-HHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEE
T ss_pred ChhHHhcCCcCCCEEEEECCHHH-HHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeE
Confidence 34455556899999999999997 99999999999986 99999872 2455678899999
Q ss_pred EEccCCCCc-ccCCCcCCC----cEEEEeeecCCCC
Q 017184 290 ISAVGQPNM-VRGSWIKPG----AVIIDVGINPVED 320 (375)
Q Consensus 290 IsAvG~p~~-I~~~~vk~g----avVIDvgin~~~~ 320 (375)
|++++.+.. ++.+++++. .+++|+++++.-+
T Consensus 80 I~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~Pr~i~ 115 (135)
T PF01488_consen 80 INATPSGMPIITEEMLKKASKKLRLVIDLAVPRDID 115 (135)
T ss_dssp EE-SSTTSTSSTHHHHTTTCHHCSEEEES-SS-SB-
T ss_pred EEecCCCCcccCHHHHHHHHhhhhceeccccCCCCC
Confidence 999998865 788999887 4999999877544
No 56
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=99.12 E-value=9.1e-10 Score=95.91 Aligned_cols=128 Identities=25% Similarity=0.383 Sum_probs=96.4
Q ss_pred CHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCC-CeEEEEcCCCC-------------------CHHhhcc
Q 017184 225 TPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRTK-------------------NPEEITR 284 (375)
Q Consensus 225 T~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~g-AtVtv~hs~t~-------------------~L~~~l~ 284 (375)
+..|+.+.+++.++++++++++|+|.|++ |+.++..|.+.| ..|++++++.. ++.+.++
T Consensus 2 d~~g~~~a~~~~~~~~~~~~i~iiG~G~~-g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (155)
T cd01065 2 DGLGFVRALEEAGIELKGKKVLILGAGGA-ARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEELLA 80 (155)
T ss_pred CHHHHHHHHHhhCCCCCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhccc
Confidence 34799999999999999999999999875 999999999886 68999876521 2334478
Q ss_pred CCcEEEEccCCCCc------ccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHH
Q 017184 285 QADIIISAVGQPNM------VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIA 358 (375)
Q Consensus 285 ~ADIVIsAvG~p~~------I~~~~vk~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a 358 (375)
++|+||++++.... +....++++.+|+|+++.+..+ .+.+..+..+. .=++| -.
T Consensus 81 ~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~-------------~l~~~~~~~g~-~~v~g------~~ 140 (155)
T cd01065 81 EADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLET-------------PLLKEARALGA-KTIDG------LE 140 (155)
T ss_pred cCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCC-------------HHHHHHHHCCC-ceeCC------HH
Confidence 89999999986542 2334568999999999876421 22233444554 23454 44
Q ss_pred HHHHHHHHHHHHHhc
Q 017184 359 MLLSNTLTSAKRVHN 373 (375)
Q Consensus 359 mLl~N~v~a~~~~~~ 373 (375)
||+.|.+++++.|+|
T Consensus 141 ~~~~q~~~~~~~~~~ 155 (155)
T cd01065 141 MLVYQAAEAFELWTG 155 (155)
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999999986
No 57
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=99.09 E-value=3.2e-10 Score=91.26 Aligned_cols=78 Identities=35% Similarity=0.501 Sum_probs=68.4
Q ss_pred CCHHHHHHHHHHhC----CCCCCCEEEEEcCCcccHHHHHHHHhhC-CCeEEEEcCCCCCHHhhccCCcEEEEccCCCCc
Q 017184 224 CTPKGCIELLHRYG----FDIKGKRAVVIGRSNIVGMPAALLLQRE-DATVSIVHSRTKNPEEITRQADIIISAVGQPNM 298 (375)
Q Consensus 224 cT~~gvi~lL~~~~----i~l~GK~vvVIGrs~~VGkpla~lL~~~-gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~ 298 (375)
||+.++++.|++.. .++++|+++|+|+|.. |++++.+|.+. +.+|++++| ||+|+++|.+++
T Consensus 1 ~t~~~~~~~l~~~~~~~~~~~~~~~v~i~G~G~~-g~~~a~~l~~~~~~~v~v~~r------------di~i~~~~~~~~ 67 (86)
T cd05191 1 ATAAGAVALLKAAGKVTNKSLKGKTVVVLGAGEV-GKGIAKLLADEGGKKVVLCDR------------DILVTATPAGVP 67 (86)
T ss_pred ChhHHHHHHHHHHHHHhCCCCCCCEEEEECCCHH-HHHHHHHHHHcCCCEEEEEcC------------CEEEEcCCCCCC
Confidence 78899888888654 5599999999999775 99999999998 578999987 999999999999
Q ss_pred ccC---CCcCCCcEEEEee
Q 017184 299 VRG---SWIKPGAVIIDVG 314 (375)
Q Consensus 299 I~~---~~vk~gavVIDvg 314 (375)
+.+ .+++++.+|+|+.
T Consensus 68 ~~~~~~~~~~~~~~v~~~a 86 (86)
T cd05191 68 VLEEATAKINEGAVVIDLA 86 (86)
T ss_pred chHHHHHhcCCCCEEEecC
Confidence 876 7889999999973
No 58
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=99.03 E-value=3e-10 Score=117.76 Aligned_cols=116 Identities=21% Similarity=0.246 Sum_probs=88.4
Q ss_pred HHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC-------------CCCHHhhccCCcEEEEccCCCC
Q 017184 231 ELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------TKNPEEITRQADIIISAVGQPN 297 (375)
Q Consensus 231 ~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~-------------t~~L~~~l~~ADIVIsAvG~p~ 297 (375)
.+++..+..+.||+|+|+|.|.+ |+++|..|...|++|+++++. ..++.+.++.|||||+++|.++
T Consensus 243 ~~~R~~~~~LaGKtVgVIG~G~I-Gr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~~leell~~ADIVI~atGt~~ 321 (476)
T PTZ00075 243 GIFRATDVMIAGKTVVVCGYGDV-GKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVVTLEDVVETADIFVTATGNKD 321 (476)
T ss_pred HHHHhcCCCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceeccHHHHHhcCCEEEECCCccc
Confidence 34556689999999999999985 999999999999999999664 2357788999999999999999
Q ss_pred cccCCCc---CCCcEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCC
Q 017184 298 MVRGSWI---KPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPG 350 (375)
Q Consensus 298 ~I~~~~v---k~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPG 350 (375)
+|+.+++ |+|+++|++|....+..- .+-+..+|+|..++++....+| .|.
T Consensus 322 iI~~e~~~~MKpGAiLINvGr~d~Ei~i--~aL~~~~~vdv~evep~v~~~~-~~~ 374 (476)
T PTZ00075 322 IITLEHMRRMKNNAIVGNIGHFDNEIQV--AELEAYPGIEIVEIKPQVDRYT-FPD 374 (476)
T ss_pred ccCHHHHhccCCCcEEEEcCCCchHHhH--HHHHhcCCceeecccCCCCeEE-eCC
Confidence 9987766 999999999987422100 0012345777666666655554 443
No 59
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=99.01 E-value=7.2e-10 Score=100.26 Aligned_cols=91 Identities=29% Similarity=0.450 Sum_probs=65.9
Q ss_pred HHHHHHH-HHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC-------------CCCHHhhccCCcEEEEc
Q 017184 227 KGCIELL-HRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------TKNPEEITRQADIIISA 292 (375)
Q Consensus 227 ~gvi~lL-~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~-------------t~~L~~~l~~ADIVIsA 292 (375)
+.+++-+ +..+..+.||+++|+|.|.+ ||.+|..|...||.|+|+... +..+++.+++|||+|++
T Consensus 7 ~S~~d~i~r~t~~~l~Gk~vvV~GYG~v-G~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~~~~~a~~~adi~vta 85 (162)
T PF00670_consen 7 QSLVDGIMRATNLMLAGKRVVVIGYGKV-GKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVMTLEEALRDADIFVTA 85 (162)
T ss_dssp HHHHHHHHHHH-S--TTSEEEEE--SHH-HHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-HHHHTTT-SEEEE-
T ss_pred hhHHHHHHhcCceeeCCCEEEEeCCCcc-cHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEecCHHHHHhhCCEEEEC
Confidence 3444444 35689999999999999995 999999999999999999765 24688999999999999
Q ss_pred cCCCCcccCCC---cCCCcEEEEeeecCC
Q 017184 293 VGQPNMVRGSW---IKPGAVIIDVGINPV 318 (375)
Q Consensus 293 vG~p~~I~~~~---vk~gavVIDvgin~~ 318 (375)
||..+.++.++ +|+|+++.++|....
T Consensus 86 TG~~~vi~~e~~~~mkdgail~n~Gh~d~ 114 (162)
T PF00670_consen 86 TGNKDVITGEHFRQMKDGAILANAGHFDV 114 (162)
T ss_dssp SSSSSSB-HHHHHHS-TTEEEEESSSSTT
T ss_pred CCCccccCHHHHHHhcCCeEEeccCcCce
Confidence 99998888765 599999999996543
No 60
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=98.97 E-value=9.6e-10 Score=112.34 Aligned_cols=157 Identities=20% Similarity=0.321 Sum_probs=115.1
Q ss_pred HcCCeEEEEeCCCCCCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccc
Q 017184 141 SVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPL 220 (375)
Q Consensus 141 ~~GI~~~~~~l~~~vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~ 220 (375)
..|+++-. +.|.|++..++..-.-..=.|.. . .+-..-+.++|.-.|-|-.-|..|.|.+..
T Consensus 100 AsGLDSmV------lGE~QILGQVK~Ay~~a~~~g~~-----g-~~L~~lFqkAi~~gKrvRseT~I~~~~VSi------ 161 (414)
T COG0373 100 ASGLDSLV------LGETQILGQVKDAYAKAQENGTL-----G-KVLNRLFQKAISVGKRVRSETGIGKGAVSI------ 161 (414)
T ss_pred hccchhhh------cCcHHHHHHHHHHHHHHHHcCCc-----h-HHHHHHHHHHHHHHHHhhcccCCCCCccch------
Confidence 45777643 35567776666543321111111 1 112234556787788877767666555432
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCC-CeEEEEcCCC-----------------CCHHhh
Q 017184 221 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRT-----------------KNPEEI 282 (375)
Q Consensus 221 ~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~g-AtVtv~hs~t-----------------~~L~~~ 282 (375)
+.+++++.++...+|++|+|+|||+|.+ |.-++..|..+| ..|+|+||+- .++.++
T Consensus 162 -----~saAv~lA~~~~~~L~~~~vlvIGAGem-~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~~ 235 (414)
T COG0373 162 -----SSAAVELAKRIFGSLKDKKVLVIGAGEM-GELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLEA 235 (414)
T ss_pred -----HHHHHHHHHHHhcccccCeEEEEcccHH-HHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHHh
Confidence 3788999999999999999999999997 999999999999 5899999972 467889
Q ss_pred ccCCcEEEEccCCCCc-ccCCCcCCC------cEEEEeeecCCCCC
Q 017184 283 TRQADIIISAVGQPNM-VRGSWIKPG------AVIIDVGINPVEDA 321 (375)
Q Consensus 283 l~~ADIVIsAvG~p~~-I~~~~vk~g------avVIDvgin~~~~~ 321 (375)
+.++||||++||.|++ |+.+++... .++||++.+|+-++
T Consensus 236 l~~~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavPRdie~ 281 (414)
T COG0373 236 LAEADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVPRDVEP 281 (414)
T ss_pred hhhCCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCCCCCCc
Confidence 9999999999999997 688777443 69999999997654
No 61
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=98.86 E-value=8e-09 Score=105.92 Aligned_cols=157 Identities=17% Similarity=0.200 Sum_probs=108.2
Q ss_pred HcCCeEEEEeCCCCCCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccc
Q 017184 141 SVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPL 220 (375)
Q Consensus 141 ~~GI~~~~~~l~~~vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~ 220 (375)
..|+++-. +.|.|++..+++.-+...=.|.. ..+-..-+..++.-.|.|---|..+.|..
T Consensus 103 asGLdSmV------lGE~QIlgQVK~A~~~A~~~g~~------g~~L~~lf~~A~~~aKrVrteT~I~~~~v-------- 162 (414)
T PRK13940 103 ACGLESMV------LGEPQILGQVKDSYTLSKKNHAI------GKELDRVFQKVFATAKRVRSETRIGHCPV-------- 162 (414)
T ss_pred Hhccchhh------cCcHHHHHHHHHHHHHHHHcCCc------hHHHHHHHHHHHHHHHHHHhccCCCCCCc--------
Confidence 45777653 35667776666554321111110 01112334446666777654443333222
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcCCC------------------CCHHh
Q 017184 221 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT------------------KNPEE 281 (375)
Q Consensus 221 ~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs~t------------------~~L~~ 281 (375)
.-+...+++.++...++.||+|+|||+|++ |+.++..|..+|+ .+++++|+. .++.+
T Consensus 163 ---Sv~~~Av~la~~~~~~l~~kkvlviGaG~~-a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~ 238 (414)
T PRK13940 163 ---SVAFSAITLAKRQLDNISSKNVLIIGAGQT-GELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQ 238 (414)
T ss_pred ---CHHHHHHHHHHHHhcCccCCEEEEEcCcHH-HHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHH
Confidence 233667899988877899999999999997 9999999999995 799999872 23456
Q ss_pred hccCCcEEEEccCCCCc-ccCCCcCC-CcEEEEeeecCCCCC
Q 017184 282 ITRQADIIISAVGQPNM-VRGSWIKP-GAVIIDVGINPVEDA 321 (375)
Q Consensus 282 ~l~~ADIVIsAvG~p~~-I~~~~vk~-gavVIDvgin~~~~~ 321 (375)
.+.+||+||+||+.|++ |+.++++. ..++||++.+++-+|
T Consensus 239 ~l~~aDiVI~aT~a~~~vi~~~~~~~~~~~~iDLavPRdidp 280 (414)
T PRK13940 239 LIKKADIIIAAVNVLEYIVTCKYVGDKPRVFIDISIPQALDP 280 (414)
T ss_pred HhccCCEEEECcCCCCeeECHHHhCCCCeEEEEeCCCCCCCc
Confidence 78999999999999997 68777753 469999999998764
No 62
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.74 E-value=9.6e-08 Score=87.19 Aligned_cols=96 Identities=33% Similarity=0.394 Sum_probs=71.9
Q ss_pred CHHHHH----HHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC-----------------------
Q 017184 225 TPKGCI----ELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------------------- 277 (375)
Q Consensus 225 T~~gvi----~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~----------------------- 277 (375)
|+.+.+ +.|++++.+++|++++|+|..+-+|+.++..|.+.|+.|+++.|+..
T Consensus 7 ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~ 86 (194)
T cd01078 7 TAAAAVAAAGKALELMGKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETS 86 (194)
T ss_pred HHHHHHHHHHHHHHHhCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCC
Confidence 445544 44555678999999999997455699999999999999999877521
Q ss_pred ---CHHhhccCCcEEEEccCCCC--cccCC-CcCCCcEEEEeeecCCCC
Q 017184 278 ---NPEEITRQADIIISAVGQPN--MVRGS-WIKPGAVIIDVGINPVED 320 (375)
Q Consensus 278 ---~L~~~l~~ADIVIsAvG~p~--~I~~~-~vk~gavVIDvgin~~~~ 320 (375)
++.+.++++|+||++++.+. ....+ ..+++.+|+|+.++|..+
T Consensus 87 ~~~~~~~~~~~~diVi~at~~g~~~~~~~~~~~~~~~vv~D~~~~~~~~ 135 (194)
T cd01078 87 DDAARAAAIKGADVVFAAGAAGVELLEKLAWAPKPLAVAADVNAVPPVG 135 (194)
T ss_pred CHHHHHHHHhcCCEEEECCCCCceechhhhcccCceeEEEEccCCCCCC
Confidence 12356788999999998766 33333 345689999999998754
No 63
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.71 E-value=9.6e-08 Score=95.78 Aligned_cols=95 Identities=21% Similarity=0.303 Sum_probs=77.0
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhC-C-CeEEEEcCCCC---------------CHHhhccCCcEE
Q 017184 227 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRE-D-ATVSIVHSRTK---------------NPEEITRQADII 289 (375)
Q Consensus 227 ~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~-g-AtVtv~hs~t~---------------~L~~~l~~ADIV 289 (375)
.++....+..+.+++||+|+|+|++|.+|+.++..|..+ | ..+++++|+.. ++.+.+.++|+|
T Consensus 140 ~~V~la~~~lg~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~l~~~l~~aDiV 219 (340)
T PRK14982 140 RQVEQNAPRLGIDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILSLEEALPEADIV 219 (340)
T ss_pred HHHHHhHHHhccCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHhHHHHHccCCEE
Confidence 345555556778999999999999877899999999864 5 48999988631 233677899999
Q ss_pred EEccCCCCc--ccCCCcCCCcEEEEeeecCCCCC
Q 017184 290 ISAVGQPNM--VRGSWIKPGAVIIDVGINPVEDA 321 (375)
Q Consensus 290 IsAvG~p~~--I~~~~vk~gavVIDvgin~~~~~ 321 (375)
|++++.|+. +++++++++.++||++++++-++
T Consensus 220 v~~ts~~~~~~I~~~~l~~~~~viDiAvPRDVd~ 253 (340)
T PRK14982 220 VWVASMPKGVEIDPETLKKPCLMIDGGYPKNLDT 253 (340)
T ss_pred EECCcCCcCCcCCHHHhCCCeEEEEecCCCCCCc
Confidence 999998765 78899999999999999987654
No 64
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=98.69 E-value=7.4e-08 Score=96.46 Aligned_cols=156 Identities=13% Similarity=0.071 Sum_probs=100.9
Q ss_pred HcCCeEEEEeCCCCCCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccc
Q 017184 141 SVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPL 220 (375)
Q Consensus 141 ~~GI~~~~~~l~~~vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~ 220 (375)
..|+++-.+ .|.|++..+++.-....=+|-. ...-..-+..++.-.|.|---|..+.|.+
T Consensus 97 asGLDSmVl------GE~QIlGQVK~Ay~~A~~~g~~------g~~L~~lf~~A~~~aKrVRteT~I~~~~v-------- 156 (338)
T PRK00676 97 TSGMDSLIL------GETEIQGQVKRAYLKAARERKL------PFALHFLFQKALKEGKVFRSKGGAPYAEV-------- 156 (338)
T ss_pred hcccchhhc------CcHHHHHHHHHHHHHHHHcCCc------hHHHHHHHHHHHHHHHHHhhhcCCCCCCc--------
Confidence 567887533 5566766666543221111110 00112334446666777654443332221
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcCCC-----CCHH----hhccCCcEEE
Q 017184 221 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT-----KNPE----EITRQADIII 290 (375)
Q Consensus 221 ~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs~t-----~~L~----~~l~~ADIVI 290 (375)
.-+.+++++++.. .+++||+|+|||+|++ |+-++..|.++|+ .|++|||+. .++. ++..++||||
T Consensus 157 ---Sv~s~av~~~~~~-~~l~~k~vLvIGaGem-~~l~a~~L~~~g~~~i~v~nRt~~~~~~~~~~~~~~~~~~~~DvVI 231 (338)
T PRK00676 157 ---TIESVVQQELRRR-QKSKKASLLFIGYSEI-NRKVAYYLQRQGYSRITFCSRQQLTLPYRTVVREELSFQDPYDVIF 231 (338)
T ss_pred ---CHHHHHHHHHHHh-CCccCCEEEEEcccHH-HHHHHHHHHHcCCCEEEEEcCCccccchhhhhhhhhhcccCCCEEE
Confidence 1234467777665 5799999999999997 9999999999995 799999983 2232 5577999999
Q ss_pred Ec---cCCCCc-ccCCCcCCC--cEEEEeeecCCCCC
Q 017184 291 SA---VGQPNM-VRGSWIKPG--AVIIDVGINPVEDA 321 (375)
Q Consensus 291 sA---vG~p~~-I~~~~vk~g--avVIDvgin~~~~~ 321 (375)
++ ++.|+. ++.+++++. -++||++.+++-++
T Consensus 232 s~t~~Tas~~p~i~~~~~~~~~~r~~iDLAvPRdId~ 268 (338)
T PRK00676 232 FGSSESAYAFPHLSWESLADIPDRIVFDFNVPRTFPW 268 (338)
T ss_pred EcCCcCCCCCceeeHHHHhhccCcEEEEecCCCCCcc
Confidence 97 677876 566666432 48999999998664
No 65
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=98.68 E-value=6.6e-08 Score=91.50 Aligned_cols=93 Identities=27% Similarity=0.429 Sum_probs=78.6
Q ss_pred CHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCe---EEEEcCC----CC--------------------
Q 017184 225 TPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDAT---VSIVHSR----TK-------------------- 277 (375)
Q Consensus 225 T~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAt---Vtv~hs~----t~-------------------- 277 (375)
+-.|++..++..+.++++++++|+|+|++ |+.++.+|...|++ |++++|+ ..
T Consensus 8 ~lAG~~~al~~~g~~l~~~rvlvlGAGgA-g~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~ 86 (226)
T cd05311 8 TLAGLLNALKLVGKKIEEVKIVINGAGAA-GIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK 86 (226)
T ss_pred HHHHHHHHHHHhCCCccCCEEEEECchHH-HHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc
Confidence 45788999999999999999999999997 99999999999975 9999987 11
Q ss_pred ---CHHhhccCCcEEEEccCCCCcccCCCcC---CCcEEEEeeecCCCC
Q 017184 278 ---NPEEITRQADIIISAVGQPNMVRGSWIK---PGAVIIDVGINPVED 320 (375)
Q Consensus 278 ---~L~~~l~~ADIVIsAvG~p~~I~~~~vk---~gavVIDvgin~~~~ 320 (375)
++.+.++++|+||++++ ++++++++++ ++.+|+|+. ||.++
T Consensus 87 ~~~~l~~~l~~~dvlIgaT~-~G~~~~~~l~~m~~~~ivf~ls-nP~~e 133 (226)
T cd05311 87 TGGTLKEALKGADVFIGVSR-PGVVKKEMIKKMAKDPIVFALA-NPVPE 133 (226)
T ss_pred ccCCHHHHHhcCCEEEeCCC-CCCCCHHHHHhhCCCCEEEEeC-CCCCc
Confidence 24456677999999999 8888888877 889999987 88654
No 66
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.58 E-value=1.1e-07 Score=97.93 Aligned_cols=94 Identities=24% Similarity=0.332 Sum_probs=79.4
Q ss_pred cCCHHHHHHHHHHh-CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-------------CCHHhhccCCcE
Q 017184 223 PCTPKGCIELLHRY-GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADI 288 (375)
Q Consensus 223 PcT~~gvi~lL~~~-~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-------------~~L~~~l~~ADI 288 (375)
-+|.++++.-+++. ++.+.||+|+|+|.|.+ |+.++..|...|++|+++++.. .++.+.++.+|+
T Consensus 192 ~gt~~s~~~ai~rat~~~l~Gk~VlViG~G~I-G~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~~l~eal~~aDV 270 (425)
T PRK05476 192 YGTGESLLDGIKRATNVLIAGKVVVVAGYGDV-GKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVMTMEEAAELGDI 270 (425)
T ss_pred HHHHhhhHHHHHHhccCCCCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEecCHHHHHhCCCE
Confidence 35778888877766 88899999999999985 9999999999999999997642 246778889999
Q ss_pred EEEccCCCCcccCC---CcCCCcEEEEeeecC
Q 017184 289 IISAVGQPNMVRGS---WIKPGAVIIDVGINP 317 (375)
Q Consensus 289 VIsAvG~p~~I~~~---~vk~gavVIDvgin~ 317 (375)
||+++|.++.++.+ .+|+|++++++|...
T Consensus 271 VI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 271 FVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred EEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 99999998888754 569999999999754
No 67
>PLN00203 glutamyl-tRNA reductase
Probab=98.47 E-value=3.6e-07 Score=96.32 Aligned_cols=96 Identities=14% Similarity=0.187 Sum_probs=76.9
Q ss_pred CHHHHHHHHHHhCC--CCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcCCC--------------------CCHHh
Q 017184 225 TPKGCIELLHRYGF--DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT--------------------KNPEE 281 (375)
Q Consensus 225 T~~gvi~lL~~~~i--~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs~t--------------------~~L~~ 281 (375)
-+.+.+++.++..- ++.+++|+|||+|++ |+.++..|...|+ .|++++++. .++.+
T Consensus 247 v~s~Av~la~~~~~~~~l~~kkVlVIGAG~m-G~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~ 325 (519)
T PLN00203 247 VSSAAVELALMKLPESSHASARVLVIGAGKM-GKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLA 325 (519)
T ss_pred HHHHHHHHHHHhcCCCCCCCCEEEEEeCHHH-HHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHH
Confidence 34567888887654 499999999999886 9999999999997 699998762 13456
Q ss_pred hccCCcEEEEccCCCCc-ccCCCcCC----------CcEEEEeeecCCCCC
Q 017184 282 ITRQADIIISAVGQPNM-VRGSWIKP----------GAVIIDVGINPVEDA 321 (375)
Q Consensus 282 ~l~~ADIVIsAvG~p~~-I~~~~vk~----------gavVIDvgin~~~~~ 321 (375)
.+.+||+||++|+.++. ++++|+++ ..++||++++++-+|
T Consensus 326 al~~aDVVIsAT~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPRdIdp 376 (519)
T PLN00203 326 CAAEADVVFTSTSSETPLFLKEHVEALPPASDTVGGKRLFVDISVPRNVGA 376 (519)
T ss_pred HHhcCCEEEEccCCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCCCCCcc
Confidence 78899999999998885 78887643 259999999997654
No 68
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.45 E-value=6.9e-07 Score=90.39 Aligned_cols=123 Identities=29% Similarity=0.383 Sum_probs=85.8
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC---------------------CCHHhhccCCcEEEEccC---C
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------------KNPEEITRQADIIISAVG---Q 295 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t---------------------~~L~~~l~~ADIVIsAvG---~ 295 (375)
+.+++|+|||+|.+ |+.++..|...|++|++++++. .++.+.+++||+||++++ .
T Consensus 165 l~~~~VlViGaG~v-G~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~ 243 (370)
T TIGR00518 165 VEPGDVTIIGGGVV-GTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA 243 (370)
T ss_pred CCCceEEEEcCCHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence 57889999999885 9999999999999999997641 135667889999999984 3
Q ss_pred --CCcccCCCc---CCCcEEEEeeecCCCCCCCCCCceeecccchhhhhh---hcceeccCCCCccHHHHHHHHHHHHHH
Q 017184 296 --PNMVRGSWI---KPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACE---VASAITPVPGGVGPMTIAMLLSNTLTS 367 (375)
Q Consensus 296 --p~~I~~~~v---k~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~---~a~~iTPVPGGVGp~T~amLl~N~v~a 367 (375)
|.+++.+++ +++.+|||+++.+- +.-. ..+ .+..|++.+.. ..-.+.-.||-+ |.|...++.|.+..
T Consensus 244 ~~p~lit~~~l~~mk~g~vIvDva~d~G--G~~e-~~~-~t~~d~p~~~~~Gv~~~~v~nlP~~~-p~~aS~~~~~~l~~ 318 (370)
T TIGR00518 244 KAPKLVSNSLVAQMKPGAVIVDVAIDQG--GCVE-TSR-PTTHDQPTYAVHDVVHYCVANMPGAV-PKTSTYALTNATMP 318 (370)
T ss_pred CCCcCcCHHHHhcCCCCCEEEEEecCCC--CCcc-CCc-CCCCCCCEEEECCeEEEEeCCccccc-HHHHHHHHHHHHHH
Confidence 556777654 78999999998763 1100 001 12222211111 122455678888 99999999888755
Q ss_pred H
Q 017184 368 A 368 (375)
Q Consensus 368 ~ 368 (375)
+
T Consensus 319 ~ 319 (370)
T TIGR00518 319 Y 319 (370)
T ss_pred H
Confidence 4
No 69
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.43 E-value=7e-07 Score=91.55 Aligned_cols=94 Identities=29% Similarity=0.379 Sum_probs=76.7
Q ss_pred CCHHHHHHHHHH-hCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-------------CCHHhhccCCcEE
Q 017184 224 CTPKGCIELLHR-YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADII 289 (375)
Q Consensus 224 cT~~gvi~lL~~-~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-------------~~L~~~l~~ADIV 289 (375)
+|-+.+++-+.+ .++.+.||+|+|+|.|.+ |+.+++.|...|+.|+++.+.. .++++.++.+|+|
T Consensus 176 g~g~s~~~~i~r~t~~~l~Gk~VvViG~G~I-G~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~~leeal~~aDVV 254 (406)
T TIGR00936 176 GTGQSTIDGILRATNLLIAGKTVVVAGYGWC-GKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKIGDIF 254 (406)
T ss_pred ccchhHHHHHHHhcCCCCCcCEEEEECCCHH-HHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeCCHHHHHhcCCEE
Confidence 455666655544 588899999999999996 9999999999999999986442 2456778999999
Q ss_pred EEccCCCCcccC---CCcCCCcEEEEeeecCC
Q 017184 290 ISAVGQPNMVRG---SWIKPGAVIIDVGINPV 318 (375)
Q Consensus 290 IsAvG~p~~I~~---~~vk~gavVIDvgin~~ 318 (375)
|+++|.++.++. ..+|+|++++.+|....
T Consensus 255 ItaTG~~~vI~~~~~~~mK~GailiN~G~~~~ 286 (406)
T TIGR00936 255 ITATGNKDVIRGEHFENMKDGAIVANIGHFDV 286 (406)
T ss_pred EECCCCHHHHHHHHHhcCCCCcEEEEECCCCc
Confidence 999999988876 46699999999997543
No 70
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.43 E-value=5.1e-07 Score=92.60 Aligned_cols=94 Identities=21% Similarity=0.374 Sum_probs=73.9
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcCCCC-----------------CHHhhccCCcE
Q 017184 227 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRTK-----------------NPEEITRQADI 288 (375)
Q Consensus 227 ~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs~t~-----------------~L~~~l~~ADI 288 (375)
...+++.+....++.|++|+|||+|.+ |+.++..|...|+ .|++++++.. ++.+.+..+|+
T Consensus 167 ~~Av~~a~~~~~~~~~~~vlViGaG~i-G~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDv 245 (423)
T PRK00045 167 SAAVELAKQIFGDLSGKKVLVIGAGEM-GELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPEALAEADI 245 (423)
T ss_pred HHHHHHHHHhhCCccCCEEEEECchHH-HHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhccCCE
Confidence 444566655444789999999999886 9999999999997 7999988621 23456788999
Q ss_pred EEEccCCCCc-ccCCCcCC--------CcEEEEeeecCCCCC
Q 017184 289 IISAVGQPNM-VRGSWIKP--------GAVIIDVGINPVEDA 321 (375)
Q Consensus 289 VIsAvG~p~~-I~~~~vk~--------gavVIDvgin~~~~~ 321 (375)
||+++|.|+. ++.+|+++ +.++||++.++.-++
T Consensus 246 VI~aT~s~~~~i~~~~l~~~~~~~~~~~~vviDla~Prdid~ 287 (423)
T PRK00045 246 VISSTGAPHPIIGKGMVERALKARRHRPLLLVDLAVPRDIEP 287 (423)
T ss_pred EEECCCCCCcEEcHHHHHHHHhhccCCCeEEEEeCCCCCCcc
Confidence 9999998875 78888844 479999998876553
No 71
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.41 E-value=4.5e-07 Score=92.94 Aligned_cols=95 Identities=29% Similarity=0.404 Sum_probs=75.1
Q ss_pred HHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCC-CeEEEEcCCC-----------------CCHHhhccCCc
Q 017184 226 PKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRT-----------------KNPEEITRQAD 287 (375)
Q Consensus 226 ~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~g-AtVtv~hs~t-----------------~~L~~~l~~AD 287 (375)
+.+++++.++...++.|++|+|||.|.+ |+.++..|...| ..|++++++. .++.+.+..+|
T Consensus 164 ~~~Av~la~~~~~~l~~~~VlViGaG~i-G~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~~aD 242 (417)
T TIGR01035 164 SSAAVELAERIFGSLKGKKALLIGAGEM-GELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLAEAD 242 (417)
T ss_pred HHHHHHHHHHHhCCccCCEEEEECChHH-HHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHhhCC
Confidence 3455666766656799999999999886 999999999999 6899998762 13446678999
Q ss_pred EEEEccCCCCc-ccCCCcCC-------CcEEEEeeecCCCCC
Q 017184 288 IIISAVGQPNM-VRGSWIKP-------GAVIIDVGINPVEDA 321 (375)
Q Consensus 288 IVIsAvG~p~~-I~~~~vk~-------gavVIDvgin~~~~~ 321 (375)
+||+++|.|+. ++.+|+++ ..++||++.++.-++
T Consensus 243 vVi~aT~s~~~ii~~e~l~~~~~~~~~~~~viDla~Prdid~ 284 (417)
T TIGR01035 243 IVISSTGAPHPIVSKEDVERALRERTRPLFIIDIAVPRDVDP 284 (417)
T ss_pred EEEECCCCCCceEcHHHHHHHHhcCCCCeEEEEeCCCCCCCh
Confidence 99999998875 78888853 359999998775553
No 72
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=98.31 E-value=1.1e-06 Score=79.81 Aligned_cols=81 Identities=26% Similarity=0.336 Sum_probs=65.0
Q ss_pred HhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-------------CCHHhhccCCcEEEEccCC----CC
Q 017184 235 RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVGQ----PN 297 (375)
Q Consensus 235 ~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-------------~~L~~~l~~ADIVIsAvG~----p~ 297 (375)
..+.++.||+|.|||.|.+ |+.+|.+|..-|++|+.++++. .++++.+++||+|+...+. -+
T Consensus 29 ~~~~~l~g~tvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~plt~~T~~ 107 (178)
T PF02826_consen 29 FPGRELRGKTVGIIGYGRI-GRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLPLTPETRG 107 (178)
T ss_dssp TTBS-STTSEEEEESTSHH-HHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SSSSTTTTT
T ss_pred CCccccCCCEEEEEEEcCC-cCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhccccccce
Confidence 3467899999999999997 9999999999999999998763 4678899999999999883 24
Q ss_pred cccCC---CcCCCcEEEEeeec
Q 017184 298 MVRGS---WIKPGAVIIDVGIN 316 (375)
Q Consensus 298 ~I~~~---~vk~gavVIDvgin 316 (375)
+|+.+ .+|+|+++|+++--
T Consensus 108 li~~~~l~~mk~ga~lvN~aRG 129 (178)
T PF02826_consen 108 LINAEFLAKMKPGAVLVNVARG 129 (178)
T ss_dssp SBSHHHHHTSTTTEEEEESSSG
T ss_pred eeeeeeeeccccceEEEeccch
Confidence 67765 45999999999844
No 73
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=98.30 E-value=1.7e-06 Score=88.93 Aligned_cols=92 Identities=24% Similarity=0.371 Sum_probs=74.8
Q ss_pred CHHHH-HHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-------------CCHHhhccCCcEEE
Q 017184 225 TPKGC-IELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIII 290 (375)
Q Consensus 225 T~~gv-i~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-------------~~L~~~l~~ADIVI 290 (375)
|-+++ -.+++..++.+.|++|+|+|.|.+ |+.++..+...||+|+++.... .++++.++.+|+||
T Consensus 184 ~g~s~~~~i~r~t~~~l~GktVvViG~G~I-G~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~~~e~v~~aDVVI 262 (413)
T cd00401 184 CRESLIDGIKRATDVMIAGKVAVVAGYGDV-GKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMTMEEAVKEGDIFV 262 (413)
T ss_pred hchhhHHHHHHhcCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEccHHHHHcCCCEEE
Confidence 34444 455566789999999999999986 9999999999999999986542 24567788999999
Q ss_pred EccCCCCcccC---CCcCCCcEEEEeeecC
Q 017184 291 SAVGQPNMVRG---SWIKPGAVIIDVGINP 317 (375)
Q Consensus 291 sAvG~p~~I~~---~~vk~gavVIDvgin~ 317 (375)
.++|.++.+.. +++++|.+++.+|...
T Consensus 263 ~atG~~~~i~~~~l~~mk~GgilvnvG~~~ 292 (413)
T cd00401 263 TTTGNKDIITGEHFEQMKDGAIVCNIGHFD 292 (413)
T ss_pred ECCCCHHHHHHHHHhcCCCCcEEEEeCCCC
Confidence 99999887754 5679999999999654
No 74
>PLN02494 adenosylhomocysteinase
Probab=98.25 E-value=2e-06 Score=89.53 Aligned_cols=90 Identities=21% Similarity=0.322 Sum_probs=73.6
Q ss_pred CHHHHHHHHH-HhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-------------CCHHhhccCCcEEE
Q 017184 225 TPKGCIELLH-RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIII 290 (375)
Q Consensus 225 T~~gvi~lL~-~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-------------~~L~~~l~~ADIVI 290 (375)
|-+.+++-+. ..++.+.||+|+|+|.|.+ |+.++..+...|++|+++.+.. .++.+.++.+||||
T Consensus 236 tgqS~~d~i~r~t~i~LaGKtVvViGyG~I-Gr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv~leEal~~ADVVI 314 (477)
T PLN02494 236 CRHSLPDGLMRATDVMIAGKVAVICGYGDV-GKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVLTLEDVVSEADIFV 314 (477)
T ss_pred ccccHHHHHHHhcCCccCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeeccHHHHHhhCCEEE
Confidence 3455555444 4588899999999999986 9999999999999999986542 13567889999999
Q ss_pred EccCCCCcccC---CCcCCCcEEEEeee
Q 017184 291 SAVGQPNMVRG---SWIKPGAVIIDVGI 315 (375)
Q Consensus 291 sAvG~p~~I~~---~~vk~gavVIDvgi 315 (375)
+++|..+++.. +++|+|++++++|.
T Consensus 315 ~tTGt~~vI~~e~L~~MK~GAiLiNvGr 342 (477)
T PLN02494 315 TTTGNKDIIMVDHMRKMKNNAIVCNIGH 342 (477)
T ss_pred ECCCCccchHHHHHhcCCCCCEEEEcCC
Confidence 99999888744 56799999999997
No 75
>PLN02928 oxidoreductase family protein
Probab=98.24 E-value=2.2e-06 Score=86.14 Aligned_cols=134 Identities=22% Similarity=0.296 Sum_probs=89.8
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-------------------------CCHHhhccCCcEEEE
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------------KNPEEITRQADIIIS 291 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-------------------------~~L~~~l~~ADIVIs 291 (375)
+.++.||++.|||.|.+ |+.+|.+|...|++|+.++++. .+|.+.+++||+|+.
T Consensus 154 ~~~l~gktvGIiG~G~I-G~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl 232 (347)
T PLN02928 154 GDTLFGKTVFILGYGAI-GIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVL 232 (347)
T ss_pred ccCCCCCEEEEECCCHH-HHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEE
Confidence 35799999999999996 9999999999999999987641 257789999999999
Q ss_pred ccCC----CCcccCC---CcCCCcEEEEeeecCCCCCC-----CCCCceeec---ccchhh-------hhh-hcceeccC
Q 017184 292 AVGQ----PNMVRGS---WIKPGAVIIDVGINPVEDAK-----SPRGYRLVG---DVCYEE-------ACE-VASAITPV 348 (375)
Q Consensus 292 AvG~----p~~I~~~---~vk~gavVIDvgin~~~~~~-----~~~g~kl~G---DVd~~~-------v~~-~a~~iTPV 348 (375)
+++. .++|+.+ .+|+|+++||+|--.+-+.. -..| ++.| ||-..+ ..+ ..-.+||=
T Consensus 233 ~lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG~lVde~AL~~AL~~g-~i~gAaLDV~~~EP~~~~~pL~~~~nviiTPH 311 (347)
T PLN02928 233 CCTLTKETAGIVNDEFLSSMKKGALLVNIARGGLLDYDAVLAALESG-HLGGLAIDVAWSEPFDPDDPILKHPNVIITPH 311 (347)
T ss_pred CCCCChHhhcccCHHHHhcCCCCeEEEECCCccccCHHHHHHHHHcC-CeeEEEEccCCCCCCCCCChhhcCCCEEECCc
Confidence 9884 3467665 45999999999855432210 0012 4433 552111 111 12357887
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHh
Q 017184 349 PGGVGPMTIAMLLSNTLTSAKRVH 372 (375)
Q Consensus 349 PGGVGp~T~amLl~N~v~a~~~~~ 372 (375)
-||.-.-+..-+...+++..++|.
T Consensus 312 ia~~t~~~~~~~~~~~~~nl~~~~ 335 (347)
T PLN02928 312 VAGVTEYSYRSMGKIVGDAALQLH 335 (347)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHH
Confidence 777665555455555555555554
No 76
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=98.23 E-value=2.4e-06 Score=85.86 Aligned_cols=89 Identities=24% Similarity=0.368 Sum_probs=73.7
Q ss_pred HHHHHHH-HHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-------------CCHHhhccCCcEEEEc
Q 017184 227 KGCIELL-HRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISA 292 (375)
Q Consensus 227 ~gvi~lL-~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-------------~~L~~~l~~ADIVIsA 292 (375)
+..+.-+ +..++-+.||+|||.|.|.+ ||-+|+.|...||.|.|..-.. ..+.+..+.+||+|++
T Consensus 193 qS~~DgI~RaTn~liaGK~vVV~GYG~v-GrG~A~~~rg~GA~ViVtEvDPI~AleA~MdGf~V~~m~~Aa~~gDifiT~ 271 (420)
T COG0499 193 QSLLDGILRATNVLLAGKNVVVAGYGWV-GRGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKTGDIFVTA 271 (420)
T ss_pred hhHHHHHHhhhceeecCceEEEeccccc-chHHHHHhhcCCCeEEEEecCchHHHHHhhcCcEEEEhHHhhhcCCEEEEc
Confidence 4444333 34788899999999999995 9999999999999999986542 2467888999999999
Q ss_pred cCCCCcccCCCc---CCCcEEEEeeec
Q 017184 293 VGQPNMVRGSWI---KPGAVIIDVGIN 316 (375)
Q Consensus 293 vG~p~~I~~~~v---k~gavVIDvgin 316 (375)
+|.-+.|+.+++ |+|+++-+.|.-
T Consensus 272 TGnkdVi~~eh~~~MkDgaIl~N~GHF 298 (420)
T COG0499 272 TGNKDVIRKEHFEKMKDGAILANAGHF 298 (420)
T ss_pred cCCcCccCHHHHHhccCCeEEeccccc
Confidence 999999988765 889999999943
No 77
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.23 E-value=3.6e-06 Score=83.01 Aligned_cols=93 Identities=26% Similarity=0.388 Sum_probs=69.9
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcCCC-----------------CCHHhhccCCcE
Q 017184 227 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT-----------------KNPEEITRQADI 288 (375)
Q Consensus 227 ~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs~t-----------------~~L~~~l~~ADI 288 (375)
...+++.+...-++.|++|+|||.|.+ |+.++..|...|+ .|++++++. .++.+.++++|+
T Consensus 163 ~~Av~~a~~~~~~l~~~~V~ViGaG~i-G~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDv 241 (311)
T cd05213 163 SAAVELAEKIFGNLKGKKVLVIGAGEM-GELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLELLNEADV 241 (311)
T ss_pred HHHHHHHHHHhCCccCCEEEEECcHHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHHHHhcCCE
Confidence 345666666555689999999999886 9999999988774 799998762 124566788999
Q ss_pred EEEccCCCCc---ccC---CCcCCCcEEEEeeecCCCC
Q 017184 289 IISAVGQPNM---VRG---SWIKPGAVIIDVGINPVED 320 (375)
Q Consensus 289 VIsAvG~p~~---I~~---~~vk~gavVIDvgin~~~~ 320 (375)
||+++|.|+. +.. .+-+++.++||++.++.-+
T Consensus 242 Vi~at~~~~~~~~~~~~~~~~~~~~~~viDlavPrdi~ 279 (311)
T cd05213 242 VISATGAPHYAKIVERAMKKRSGKPRLIVDLAVPRDIE 279 (311)
T ss_pred EEECCCCCchHHHHHHHHhhCCCCCeEEEEeCCCCCCc
Confidence 9999998876 221 2223578999999877544
No 78
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.08 E-value=2.5e-05 Score=82.29 Aligned_cols=90 Identities=26% Similarity=0.461 Sum_probs=70.6
Q ss_pred HHHHHHHHHhCC----------CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC---------------C---
Q 017184 227 KGCIELLHRYGF----------DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------N--- 278 (375)
Q Consensus 227 ~gvi~lL~~~~i----------~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~---------------~--- 278 (375)
.|+++..+.++- .+.+.+|+|+|.|.+ |...+..+...|+.|+++.++.. +
T Consensus 139 ~Avi~Aa~~lgr~~~g~~taag~vp~akVlViGaG~i-Gl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e 217 (511)
T TIGR00561 139 RAIIEAAHEFGRFFTGQITAAGKVPPAKVLVIGAGVA-GLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKE 217 (511)
T ss_pred HHHHHHHHHhhhhcCCceecCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccc
Confidence 667777776653 245679999999886 99999999999999998865420 0
Q ss_pred -----------------------HHhhccCCcEEEEcc---C--CCCcccCCCc---CCCcEEEEeeecC
Q 017184 279 -----------------------PEEITRQADIIISAV---G--QPNMVRGSWI---KPGAVIIDVGINP 317 (375)
Q Consensus 279 -----------------------L~~~l~~ADIVIsAv---G--~p~~I~~~~v---k~gavVIDvgin~ 317 (375)
+.++++++||||+++ | .|.+++.+++ |+|.+|||+++.+
T Consensus 218 ~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~ 287 (511)
T TIGR00561 218 EGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQ 287 (511)
T ss_pred cccccccceeecCHHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCC
Confidence 345678999999999 5 4667888765 8999999999865
No 79
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=98.05 E-value=1.1e-05 Score=82.08 Aligned_cols=143 Identities=20% Similarity=0.237 Sum_probs=92.9
Q ss_pred HHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC---------CCCHHhhccCCcEEEEccCC-----
Q 017184 230 IELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR---------TKNPEEITRQADIIISAVGQ----- 295 (375)
Q Consensus 230 i~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~---------t~~L~~~l~~ADIVIsAvG~----- 295 (375)
+.+.++.+.++.||++.|||.|++ |+.++..|...|++|..+++. ..+|++.+++||||+..++-
T Consensus 104 L~l~r~~g~~L~gktvGIIG~G~I-G~~vA~~l~a~G~~V~~~dp~~~~~~~~~~~~~L~ell~~sDiI~lh~PLt~~g~ 182 (378)
T PRK15438 104 LMLAERDGFSLHDRTVGIVGVGNV-GRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQEADILTFHTPLFKDGP 182 (378)
T ss_pred HHHhccCCCCcCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCcccccccccccCCHHHHHhhCCEEEEeCCCCCCcc
Confidence 334456788999999999999996 999999999999999999742 12588999999999977762
Q ss_pred ---CCcccCC---CcCCCcEEEEeeecCCCCCC-----CCCC--ceeecccchh------hhhhhcceeccCCCCccHHH
Q 017184 296 ---PNMVRGS---WIKPGAVIIDVGINPVEDAK-----SPRG--YRLVGDVCYE------EACEVASAITPVPGGVGPMT 356 (375)
Q Consensus 296 ---p~~I~~~---~vk~gavVIDvgin~~~~~~-----~~~g--~kl~GDVd~~------~v~~~a~~iTPVPGGVGp~T 356 (375)
-+++..+ .+|+|+++|++|--.+-|.. -..| ....=||=.. ...+....+||=-+|.-.=+
T Consensus 183 ~~T~~li~~~~l~~mk~gailIN~aRG~vVDe~AL~~aL~~g~~~ga~LDV~e~EP~~~~~Ll~~~~i~TPHiAg~s~e~ 262 (378)
T PRK15438 183 YKTLHLADEKLIRSLKPGAILINACRGAVVDNTALLTCLNEGQKLSVVLDVWEGEPELNVELLKKVDIGTPHIAGYTLEG 262 (378)
T ss_pred cccccccCHHHHhcCCCCcEEEECCCchhcCHHHHHHHHHhCCCcEEEEecCCCCCCCchhhhhcCCEECCccCcCcHHH
Confidence 1356553 56899999999965542210 0001 1234455211 11222337888888876544
Q ss_pred HHHHHHHHHHHHHHHhc
Q 017184 357 IAMLLSNTLTSAKRVHN 373 (375)
Q Consensus 357 ~amLl~N~v~a~~~~~~ 373 (375)
.......++++..++++
T Consensus 263 ~~~~~~~~~~~l~~~~~ 279 (378)
T PRK15438 263 KARGTTQVFEAYSKFIG 279 (378)
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 44434444444444443
No 80
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=98.05 E-value=5.6e-05 Score=77.12 Aligned_cols=142 Identities=20% Similarity=0.232 Sum_probs=94.8
Q ss_pred HHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC---------CCHHhhccCCcEEEEccCC-C----
Q 017184 231 ELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------KNPEEITRQADIIISAVGQ-P---- 296 (375)
Q Consensus 231 ~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t---------~~L~~~l~~ADIVIsAvG~-p---- 296 (375)
.+.++.+.++.||+|.|||.|++ |+.++..|...|++|..++... .++++.+++||||+..++- +
T Consensus 105 ~l~r~~g~~l~gktvGIIG~G~I-G~~va~~l~a~G~~V~~~Dp~~~~~~~~~~~~~l~ell~~aDiV~lh~Plt~~g~~ 183 (381)
T PRK00257 105 TLAEREGVDLAERTYGVVGAGHV-GGRLVRVLRGLGWKVLVCDPPRQEAEGDGDFVSLERILEECDVISLHTPLTKEGEH 183 (381)
T ss_pred HHhcccCCCcCcCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCcccccccCccccCHHHHHhhCCEEEEeCcCCCCccc
Confidence 34456788999999999999996 9999999999999999987431 2578899999999988873 2
Q ss_pred ---CcccCC---CcCCCcEEEEeeecCCCCCCC-----CCC--ceeecccchh------hhhhhcceeccCCCCccHHHH
Q 017184 297 ---NMVRGS---WIKPGAVIIDVGINPVEDAKS-----PRG--YRLVGDVCYE------EACEVASAITPVPGGVGPMTI 357 (375)
Q Consensus 297 ---~~I~~~---~vk~gavVIDvgin~~~~~~~-----~~g--~kl~GDVd~~------~v~~~a~~iTPVPGGVGp~T~ 357 (375)
+++..+ .+|+|+++|+++--.+-+... ..| ....=||=.. ......-.+||=-+|...=+.
T Consensus 184 ~T~~li~~~~l~~mk~gailIN~aRG~vVde~AL~~aL~~g~i~~a~LDV~e~EP~~~~~L~~~nvi~TPHiAg~s~e~~ 263 (381)
T PRK00257 184 PTRHLLDEAFLASLRPGAWLINASRGAVVDNQALREALLSGEDLDAVLDVWEGEPQIDLELADLCTIATPHIAGYSLDGK 263 (381)
T ss_pred cccccCCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCCCCChhhhhCCEEEcCccccCCHHHH
Confidence 467654 569999999999665422100 011 0133455211 122224457887787765555
Q ss_pred HHHHHHHHHHHHHHhc
Q 017184 358 AMLLSNTLTSAKRVHN 373 (375)
Q Consensus 358 amLl~N~v~a~~~~~~ 373 (375)
.-....+++...++++
T Consensus 264 ~r~~~~~~~nl~~~~~ 279 (381)
T PRK00257 264 ARGTAQIYQALCRFFG 279 (381)
T ss_pred HHHHHHHHHHHHHHHc
Confidence 4455555555555554
No 81
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=98.03 E-value=1.5e-05 Score=74.09 Aligned_cols=95 Identities=22% Similarity=0.240 Sum_probs=68.0
Q ss_pred cCCHHHHHHHHH----Hh--CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCH--------------Hhh
Q 017184 223 PCTPKGCIELLH----RY--GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP--------------EEI 282 (375)
Q Consensus 223 PcT~~gvi~lL~----~~--~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L--------------~~~ 282 (375)
|.|.+|+...++ +. +.+++||+++|+|.|+ ||+.++..|.+.|++|++++++...+ .+.
T Consensus 3 ~aTg~Gv~~~~~~~~~~~~~~~~l~gk~v~I~G~G~-vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~~~l 81 (200)
T cd01075 3 PPTAYGVFLGMKAAAEHLLGTDSLEGKTVAVQGLGK-VGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVAPEEI 81 (200)
T ss_pred ChhHHHHHHHHHHHHHHhcCCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcchhh
Confidence 678888755444 43 7899999999999998 59999999999999999987753211 122
Q ss_pred c-cCCcEEEEccCCCCcccCCCcCC--CcEEEEeeecCCC
Q 017184 283 T-RQADIIISAVGQPNMVRGSWIKP--GAVIIDVGINPVE 319 (375)
Q Consensus 283 l-~~ADIVIsAvG~p~~I~~~~vk~--gavVIDvgin~~~ 319 (375)
. .++||+|.++.. +.|+.+.++. ..+|++-+-+|..
T Consensus 82 ~~~~~Dv~vp~A~~-~~I~~~~~~~l~~~~v~~~AN~~~~ 120 (200)
T cd01075 82 YSVDADVFAPCALG-GVINDDTIPQLKAKAIAGAANNQLA 120 (200)
T ss_pred ccccCCEEEecccc-cccCHHHHHHcCCCEEEECCcCccC
Confidence 2 379999966553 3565554432 4578887766553
No 82
>PRK13243 glyoxylate reductase; Reviewed
Probab=98.02 E-value=1.2e-05 Score=80.32 Aligned_cols=81 Identities=23% Similarity=0.371 Sum_probs=67.0
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC------------CCHHhhccCCcEEEEccCCC----Cccc
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVGQP----NMVR 300 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t------------~~L~~~l~~ADIVIsAvG~p----~~I~ 300 (375)
+.++.||++.|||.|.+ |+.+|..|...|++|..++++. .++.+.+++||+|+.+++.. +++.
T Consensus 145 g~~L~gktvgIiG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP~t~~T~~~i~ 223 (333)
T PRK13243 145 GYDVYGKTIGIIGFGRI-GQAVARRAKGFGMRILYYSRTRKPEAEKELGAEYRPLEELLRESDFVSLHVPLTKETYHMIN 223 (333)
T ss_pred ccCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCChhhHHHcCCEecCHHHHHhhCCEEEEeCCCChHHhhccC
Confidence 35789999999999996 9999999999999999987642 25778899999999999853 3565
Q ss_pred C---CCcCCCcEEEEeeecCC
Q 017184 301 G---SWIKPGAVIIDVGINPV 318 (375)
Q Consensus 301 ~---~~vk~gavVIDvgin~~ 318 (375)
. +.+|+|+++||++--..
T Consensus 224 ~~~~~~mk~ga~lIN~aRg~~ 244 (333)
T PRK13243 224 EERLKLMKPTAILVNTARGKV 244 (333)
T ss_pred HHHHhcCCCCeEEEECcCchh
Confidence 4 45699999999996654
No 83
>PRK06436 glycerate dehydrogenase; Provisional
Probab=97.97 E-value=1.5e-05 Score=78.78 Aligned_cols=80 Identities=23% Similarity=0.331 Sum_probs=66.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC---------CCHHhhccCCcEEEEccCCC----CcccC---
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------KNPEEITRQADIIISAVGQP----NMVRG--- 301 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t---------~~L~~~l~~ADIVIsAvG~p----~~I~~--- 301 (375)
..+.||++.|||.|.+ |+++|.+|...|++|+.++++. .++++.+++||+|+..++.. +++..
T Consensus 118 ~~L~gktvgIiG~G~I-G~~vA~~l~afG~~V~~~~r~~~~~~~~~~~~~l~ell~~aDiv~~~lp~t~~T~~li~~~~l 196 (303)
T PRK06436 118 KLLYNKSLGILGYGGI-GRRVALLAKAFGMNIYAYTRSYVNDGISSIYMEPEDIMKKSDFVLISLPLTDETRGMINSKML 196 (303)
T ss_pred CCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCcccCcccccCCHHHHHhhCCEEEECCCCCchhhcCcCHHHH
Confidence 4789999999999996 9999999988899999988642 36888999999999999842 35654
Q ss_pred CCcCCCcEEEEeeecCC
Q 017184 302 SWIKPGAVIIDVGINPV 318 (375)
Q Consensus 302 ~~vk~gavVIDvgin~~ 318 (375)
+.+|+|+++|++|--..
T Consensus 197 ~~mk~ga~lIN~sRG~~ 213 (303)
T PRK06436 197 SLFRKGLAIINVARADV 213 (303)
T ss_pred hcCCCCeEEEECCCccc
Confidence 35699999999997654
No 84
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=97.97 E-value=6.6e-06 Score=81.56 Aligned_cols=77 Identities=36% Similarity=0.538 Sum_probs=64.4
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC---------------------CCCHHhhccCCcEEEEccC----
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR---------------------TKNPEEITRQADIIISAVG---- 294 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~---------------------t~~L~~~l~~ADIVIsAvG---- 294 (375)
+...+|+|||.|- ||.-.|++....||+||+...+ ..++++.+++||+||.|+=
T Consensus 166 V~~~kv~iiGGGv-vgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpga 244 (371)
T COG0686 166 VLPAKVVVLGGGV-VGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGA 244 (371)
T ss_pred CCCccEEEECCcc-ccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCC
Confidence 3456799999866 6999999999999999999754 1367899999999998873
Q ss_pred -CCCcccCCCc---CCCcEEEEeeecC
Q 017184 295 -QPNMVRGSWI---KPGAVIIDVGINP 317 (375)
Q Consensus 295 -~p~~I~~~~v---k~gavVIDvgin~ 317 (375)
.|.+++.+|+ |||+++|||+++.
T Consensus 245 kaPkLvt~e~vk~MkpGsVivDVAiDq 271 (371)
T COG0686 245 KAPKLVTREMVKQMKPGSVIVDVAIDQ 271 (371)
T ss_pred CCceehhHHHHHhcCCCcEEEEEEEcC
Confidence 4778888865 8999999999975
No 85
>PRK06932 glycerate dehydrogenase; Provisional
Probab=97.97 E-value=1.3e-05 Score=79.39 Aligned_cols=80 Identities=26% Similarity=0.410 Sum_probs=66.1
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------CCHHhhccCCcEEEEccCC----CCcccCC---
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------KNPEEITRQADIIISAVGQ----PNMVRGS--- 302 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------~~L~~~l~~ADIVIsAvG~----p~~I~~~--- 302 (375)
.++.||++.|||.|.+ |+.+|.+|..-|++|..+++.. .+|.+.+++||+|+..++. -++|+.+
T Consensus 143 ~~l~gktvgIiG~G~I-G~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~~sDiv~l~~Plt~~T~~li~~~~l~ 221 (314)
T PRK06932 143 TDVRGSTLGVFGKGCL-GTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLKQADIVTLHCPLTETTQNLINAETLA 221 (314)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHHhCCEEEEcCCCChHHhcccCHHHHH
Confidence 4689999999999997 9999999999999998776532 2578999999999999883 2467665
Q ss_pred CcCCCcEEEEeeecCC
Q 017184 303 WIKPGAVIIDVGINPV 318 (375)
Q Consensus 303 ~vk~gavVIDvgin~~ 318 (375)
++|+|+++|++|--.+
T Consensus 222 ~mk~ga~lIN~aRG~~ 237 (314)
T PRK06932 222 LMKPTAFLINTGRGPL 237 (314)
T ss_pred hCCCCeEEEECCCccc
Confidence 5699999999996544
No 86
>PRK06487 glycerate dehydrogenase; Provisional
Probab=97.94 E-value=1.7e-05 Score=78.66 Aligned_cols=80 Identities=20% Similarity=0.297 Sum_probs=66.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-------CCHHhhccCCcEEEEccCC----CCcccCC---C
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------KNPEEITRQADIIISAVGQ----PNMVRGS---W 303 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-------~~L~~~l~~ADIVIsAvG~----p~~I~~~---~ 303 (375)
.++.||++.|||.|.+ |+.+|.+|..-|++|...++.. .+|.+.+++||+|+..++. -++|+.+ .
T Consensus 144 ~~l~gktvgIiG~G~I-G~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lPlt~~T~~li~~~~~~~ 222 (317)
T PRK06487 144 VELEGKTLGLLGHGEL-GGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLPQVDALTLHCPLTEHTRHLIGARELAL 222 (317)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHHhCCEEEECCCCChHHhcCcCHHHHhc
Confidence 4689999999999997 9999999999999998776542 2588999999999999884 2467765 5
Q ss_pred cCCCcEEEEeeecCC
Q 017184 304 IKPGAVIIDVGINPV 318 (375)
Q Consensus 304 vk~gavVIDvgin~~ 318 (375)
+|+|+++|++|--.+
T Consensus 223 mk~ga~lIN~aRG~v 237 (317)
T PRK06487 223 MKPGALLINTARGGL 237 (317)
T ss_pred CCCCeEEEECCCccc
Confidence 699999999996544
No 87
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=97.94 E-value=2e-05 Score=77.95 Aligned_cols=80 Identities=30% Similarity=0.371 Sum_probs=66.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC---------CCHHhhccCCcEEEEccCC----CCcccCC--
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------KNPEEITRQADIIISAVGQ----PNMVRGS-- 302 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t---------~~L~~~l~~ADIVIsAvG~----p~~I~~~-- 302 (375)
.++.||++.|||.|.+ |+.+|.+|..-|++|..+++.. .++++.+++||+|+..++. -++|..+
T Consensus 141 ~~L~gktvGIiG~G~I-G~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~T~~li~~~~~ 219 (311)
T PRK08410 141 GEIKGKKWGIIGLGTI-GKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEKTKNLIAYKEL 219 (311)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCchhhcccCHHHH
Confidence 4789999999999997 9999999999999999887642 2578999999999998883 2467664
Q ss_pred -CcCCCcEEEEeeecCC
Q 017184 303 -WIKPGAVIIDVGINPV 318 (375)
Q Consensus 303 -~vk~gavVIDvgin~~ 318 (375)
.+|+|+++|+++--.+
T Consensus 220 ~~Mk~~a~lIN~aRG~v 236 (311)
T PRK08410 220 KLLKDGAILINVGRGGI 236 (311)
T ss_pred HhCCCCeEEEECCCccc
Confidence 5699999999996654
No 88
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=97.92 E-value=2.1e-05 Score=78.06 Aligned_cols=80 Identities=11% Similarity=0.168 Sum_probs=65.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC------------CCHHhhccCCcEEEEccCCC----CcccC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVGQP----NMVRG 301 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t------------~~L~~~l~~ADIVIsAvG~p----~~I~~ 301 (375)
..++||+|.|||.|.+ |+.+|..|...|++|+.++++. .++.+.+++||+|+...+.. +++..
T Consensus 132 ~~l~g~tvgIvG~G~I-G~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt~~T~~li~~ 210 (312)
T PRK15469 132 YHREDFTIGILGAGVL-GSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNTPETVGIINQ 210 (312)
T ss_pred CCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCCHHHHHHhHH
Confidence 4689999999999996 9999999999999998886542 25788899999999998843 24554
Q ss_pred ---CCcCCCcEEEEeeecCC
Q 017184 302 ---SWIKPGAVIIDVGINPV 318 (375)
Q Consensus 302 ---~~vk~gavVIDvgin~~ 318 (375)
+.+|+|+++|++|--.+
T Consensus 211 ~~l~~mk~ga~lIN~aRG~v 230 (312)
T PRK15469 211 QLLEQLPDGAYLLNLARGVH 230 (312)
T ss_pred HHHhcCCCCcEEEECCCccc
Confidence 35699999999996554
No 89
>PRK07574 formate dehydrogenase; Provisional
Probab=97.92 E-value=2e-05 Score=80.52 Aligned_cols=133 Identities=15% Similarity=0.255 Sum_probs=88.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------CCHHhhccCCcEEEEccCCC----Ccc
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQP----NMV 299 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------~~L~~~l~~ADIVIsAvG~p----~~I 299 (375)
.++.||+|.|||.|.+ |+.+|..|...|++|..++++. .++++.+++||+|+..++.. +++
T Consensus 188 ~~L~gktVGIvG~G~I-G~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li 266 (385)
T PRK07574 188 YDLEGMTVGIVGAGRI-GLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHPETEHLF 266 (385)
T ss_pred eecCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCHHHHHHh
Confidence 4689999999999996 9999999999999999988652 35788899999999999843 356
Q ss_pred cCC---CcCCCcEEEEeeecCCCCCC-----CCCCce---eecccchhhh-------hh-hcceeccCCCCccHHHHHHH
Q 017184 300 RGS---WIKPGAVIIDVGINPVEDAK-----SPRGYR---LVGDVCYEEA-------CE-VASAITPVPGGVGPMTIAML 360 (375)
Q Consensus 300 ~~~---~vk~gavVIDvgin~~~~~~-----~~~g~k---l~GDVd~~~v-------~~-~a~~iTPVPGGVGp~T~amL 360 (375)
+.+ .+|+|+++||++--.+-+.. -..| + ...||=+.+= .+ -.-.+||=-+|.-.=+..-+
T Consensus 267 ~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG-~i~GAaLDV~~~EPlp~d~pL~~~pNvilTPHiag~T~e~~~~~ 345 (385)
T PRK07574 267 DADVLSRMKRGSYLVNTARGKIVDRDAVVRALESG-HLAGYAGDVWFPQPAPADHPWRTMPRNGMTPHISGTTLSAQARY 345 (385)
T ss_pred CHHHHhcCCCCcEEEECCCCchhhHHHHHHHHHhC-CccEEEEecCCCCCCCCCChHHhCCCeEECCccccCcHHHHHHH
Confidence 553 56999999999865432100 0001 2 3456633210 00 12257887777654444444
Q ss_pred HHHHHHHHHHHh
Q 017184 361 LSNTLTSAKRVH 372 (375)
Q Consensus 361 l~N~v~a~~~~~ 372 (375)
...+++..++|+
T Consensus 346 ~~~~~~ni~~~~ 357 (385)
T PRK07574 346 AAGTREILECFF 357 (385)
T ss_pred HHHHHHHHHHHH
Confidence 444444444443
No 90
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=97.92 E-value=3.5e-05 Score=75.23 Aligned_cols=94 Identities=14% Similarity=0.266 Sum_probs=74.1
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC--------------------CHH-hhccC
Q 017184 227 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK--------------------NPE-EITRQ 285 (375)
Q Consensus 227 ~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~--------------------~L~-~~l~~ 285 (375)
.++++-.++.|++++..+|.|+|+-+.+|..++..|..+++...+++|... ++. +++..
T Consensus 152 r~Vl~~~~~lGidlsqatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~i~s~d~~~~~e 231 (351)
T COG5322 152 RQVLKHFAQLGIDLSQATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGKIMSLDYALPQE 231 (351)
T ss_pred HHHHHHHHHhCcCHHHCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCeeeecccccccc
Confidence 345677778899999999999999999999999999999988888875420 122 34444
Q ss_pred CcEEEEccCCCCc-ccCCCcCCCcEEEEeeecCCCC
Q 017184 286 ADIIISAVGQPNM-VRGSWIKPGAVIIDVGINPVED 320 (375)
Q Consensus 286 ADIVIsAvG~p~~-I~~~~vk~gavVIDvgin~~~~ 320 (375)
+|+|.+|+-.++. |.+.++|||++++|-|++.+-+
T Consensus 232 ~i~v~vAs~~~g~~I~pq~lkpg~~ivD~g~P~dvd 267 (351)
T COG5322 232 DILVWVASMPKGVEIFPQHLKPGCLIVDGGYPKDVD 267 (351)
T ss_pred ceEEEEeecCCCceechhhccCCeEEEcCCcCcccc
Confidence 4555577776665 8999999999999999987644
No 91
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=97.89 E-value=2.2e-05 Score=78.44 Aligned_cols=80 Identities=23% Similarity=0.335 Sum_probs=65.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC----------CCHHhhccCCcEEEEccCCC----CcccC--
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------KNPEEITRQADIIISAVGQP----NMVRG-- 301 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t----------~~L~~~l~~ADIVIsAvG~p----~~I~~-- 301 (375)
.++.|+++.|||.|.+ |+++|.+|...|++|+.++++. .++.+.+++||+|+.+++.. +++..
T Consensus 142 ~~l~g~~VgIIG~G~I-G~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~t~~li~~~~ 220 (330)
T PRK12480 142 KPVKNMTVAIIGTGRI-GAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKESYHLFDKAM 220 (330)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHHHHHHHhHHH
Confidence 4689999999999996 9999999999999999987542 36788999999999999854 24433
Q ss_pred -CCcCCCcEEEEeeecCC
Q 017184 302 -SWIKPGAVIIDVGINPV 318 (375)
Q Consensus 302 -~~vk~gavVIDvgin~~ 318 (375)
..+|+|+++|+++--.+
T Consensus 221 l~~mk~gavlIN~aRG~~ 238 (330)
T PRK12480 221 FDHVKKGAILVNAARGAV 238 (330)
T ss_pred HhcCCCCcEEEEcCCccc
Confidence 35689999999986543
No 92
>PRK08605 D-lactate dehydrogenase; Validated
Probab=97.87 E-value=3.5e-05 Score=76.92 Aligned_cols=81 Identities=22% Similarity=0.313 Sum_probs=64.8
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHH-hhCCCeEEEEcCCC-----------CCHHhhccCCcEEEEccCCC----Cccc
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLL-QREDATVSIVHSRT-----------KNPEEITRQADIIISAVGQP----NMVR 300 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL-~~~gAtVtv~hs~t-----------~~L~~~l~~ADIVIsAvG~p----~~I~ 300 (375)
+.++.|++|.|||.|.+ |+.+|..| ...|++|+..+++. .++.+.+++||+|+.+++.. +++.
T Consensus 141 ~~~l~g~~VgIIG~G~I-G~~vA~~L~~~~g~~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvIvl~lP~t~~t~~li~ 219 (332)
T PRK08605 141 SRSIKDLKVAVIGTGRI-GLAVAKIFAKGYGSDVVAYDPFPNAKAATYVDYKDTIEEAVEGADIVTLHMPATKYNHYLFN 219 (332)
T ss_pred cceeCCCEEEEECCCHH-HHHHHHHHHhcCCCEEEEECCCccHhHHhhccccCCHHHHHHhCCEEEEeCCCCcchhhhcC
Confidence 34689999999999996 99999999 55688998887542 36888999999999998853 3454
Q ss_pred C---CCcCCCcEEEEeeecCC
Q 017184 301 G---SWIKPGAVIIDVGINPV 318 (375)
Q Consensus 301 ~---~~vk~gavVIDvgin~~ 318 (375)
. +++|+|+++||++--..
T Consensus 220 ~~~l~~mk~gailIN~sRG~~ 240 (332)
T PRK08605 220 ADLFKHFKKGAVFVNCARGSL 240 (332)
T ss_pred HHHHhcCCCCcEEEECCCCcc
Confidence 3 46799999999986543
No 93
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=97.86 E-value=3.8e-05 Score=76.31 Aligned_cols=75 Identities=17% Similarity=0.333 Sum_probs=62.7
Q ss_pred CCCEEEEEcCCcccHHHHHHHHh-hCC-CeEEEEcCCC---------------------CCHHhhccCCcEEEEccCCCC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQ-RED-ATVSIVHSRT---------------------KNPEEITRQADIIISAVGQPN 297 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~-~~g-AtVtv~hs~t---------------------~~L~~~l~~ADIVIsAvG~p~ 297 (375)
..++++|||.|+. |+..+..|. .++ .+|++++|+. .++++.+++|||||++|+.+.
T Consensus 128 ~~~~v~iiGaG~q-A~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~ 206 (326)
T TIGR02992 128 DSSVVAIFGAGMQ-ARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSET 206 (326)
T ss_pred CCcEEEEECCCHH-HHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCC
Confidence 5789999999997 999988886 466 4799998762 346678899999999999766
Q ss_pred c-ccCCCcCCCcEEEEeeec
Q 017184 298 M-VRGSWIKPGAVIIDVGIN 316 (375)
Q Consensus 298 ~-I~~~~vk~gavVIDvgin 316 (375)
. ++.+|+++|+.|.++|.+
T Consensus 207 p~i~~~~l~~g~~i~~vg~~ 226 (326)
T TIGR02992 207 PILHAEWLEPGQHVTAMGSD 226 (326)
T ss_pred cEecHHHcCCCcEEEeeCCC
Confidence 4 788999999999999964
No 94
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=97.82 E-value=3.8e-05 Score=76.73 Aligned_cols=82 Identities=24% Similarity=0.353 Sum_probs=68.5
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-------------CCHHhhccCCcEEEEccCCC----Cc
Q 017184 236 YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVGQP----NM 298 (375)
Q Consensus 236 ~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-------------~~L~~~l~~ADIVIsAvG~p----~~ 298 (375)
.+.++.||++-|||.|.+ |+.++..|..-|+.|..+++.. .+|.+.+++||||+.-++.. ++
T Consensus 136 ~g~el~gkTvGIiG~G~I-G~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~eT~g~ 214 (324)
T COG0111 136 RGTELAGKTVGIIGLGRI-GRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPETRGL 214 (324)
T ss_pred ccccccCCEEEEECCCHH-HHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcchhcc
Confidence 356889999999999997 9999999999999999998742 35889999999999998842 46
Q ss_pred ccCC---CcCCCcEEEEeeecCC
Q 017184 299 VRGS---WIKPGAVIIDVGINPV 318 (375)
Q Consensus 299 I~~~---~vk~gavVIDvgin~~ 318 (375)
|+.+ .+|+|+++|+++--.+
T Consensus 215 i~~~~~a~MK~gailIN~aRG~v 237 (324)
T COG0111 215 INAEELAKMKPGAILINAARGGV 237 (324)
T ss_pred cCHHHHhhCCCCeEEEECCCcce
Confidence 7664 4699999999985543
No 95
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=97.81 E-value=3.7e-05 Score=76.58 Aligned_cols=81 Identities=20% Similarity=0.315 Sum_probs=65.9
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHh-hCCCeEEEEcCCC------------CCHHhhccCCcEEEEccCC-C---Ccc
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQ-REDATVSIVHSRT------------KNPEEITRQADIIISAVGQ-P---NMV 299 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~-~~gAtVtv~hs~t------------~~L~~~l~~ADIVIsAvG~-p---~~I 299 (375)
+.+|.||++.|||.|.+ |+.++..|. .-|++|...+++. .++.+.+++||+|+..++. | ++|
T Consensus 140 g~~L~gktvGIiG~G~I-G~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~~l~ell~~sDvv~lh~plt~~T~~li 218 (323)
T PRK15409 140 GTDVHHKTLGIVGMGRI-GMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCIILPLTDETHHLF 218 (323)
T ss_pred cCCCCCCEEEEEcccHH-HHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEecCHHHHHHhCCEEEEeCCCChHHhhcc
Confidence 45799999999999997 999999997 7899988776542 2578899999999998884 2 467
Q ss_pred cCC---CcCCCcEEEEeeecCC
Q 017184 300 RGS---WIKPGAVIIDVGINPV 318 (375)
Q Consensus 300 ~~~---~vk~gavVIDvgin~~ 318 (375)
..+ .+|+|+++|+++--.+
T Consensus 219 ~~~~l~~mk~ga~lIN~aRG~v 240 (323)
T PRK15409 219 GAEQFAKMKSSAIFINAGRGPV 240 (323)
T ss_pred CHHHHhcCCCCeEEEECCCccc
Confidence 664 5699999999986554
No 96
>PLN02306 hydroxypyruvate reductase
Probab=97.80 E-value=3.8e-05 Score=78.43 Aligned_cols=80 Identities=24% Similarity=0.295 Sum_probs=64.6
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHh-hCCCeEEEEcCC----------------------------CCCHHhhccCCc
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQ-REDATVSIVHSR----------------------------TKNPEEITRQAD 287 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~-~~gAtVtv~hs~----------------------------t~~L~~~l~~AD 287 (375)
+.++.||++.|||.|.+ |+.+|.+|. .-|++|..++++ ..+|++.+++||
T Consensus 160 g~~L~gktvGIiG~G~I-G~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sD 238 (386)
T PLN02306 160 GNLLKGQTVGVIGAGRI-GSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREAD 238 (386)
T ss_pred CcCCCCCEEEEECCCHH-HHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCC
Confidence 34689999999999997 999999985 789999887642 136889999999
Q ss_pred EEEEccCC----CCcccCC---CcCCCcEEEEeeecC
Q 017184 288 IIISAVGQ----PNMVRGS---WIKPGAVIIDVGINP 317 (375)
Q Consensus 288 IVIsAvG~----p~~I~~~---~vk~gavVIDvgin~ 317 (375)
||+..++. .++|+.+ ++|+|+++|++|--.
T Consensus 239 iV~lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~ 275 (386)
T PLN02306 239 VISLHPVLDKTTYHLINKERLALMKKEAVLVNASRGP 275 (386)
T ss_pred EEEEeCCCChhhhhhcCHHHHHhCCCCeEEEECCCcc
Confidence 99988773 2467664 569999999999544
No 97
>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]
Probab=97.80 E-value=3.4e-05 Score=76.43 Aligned_cols=82 Identities=28% Similarity=0.384 Sum_probs=70.5
Q ss_pred HhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-------------CCHHhhccCCcEEEEccCCCCcccC
Q 017184 235 RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVGQPNMVRG 301 (375)
Q Consensus 235 ~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-------------~~L~~~l~~ADIVIsAvG~p~~I~~ 301 (375)
...+-+.||.+||.|.|. |||-.|..|...|+.|+|..-.. ..+++.++++||+|+++|.-+.|..
T Consensus 207 aTDvM~aGKv~Vv~GYGd-VGKgCaqaLkg~g~~VivTEiDPI~ALQAaMeG~~V~tm~ea~~e~difVTtTGc~dii~~ 285 (434)
T KOG1370|consen 207 ATDVMIAGKVAVVCGYGD-VGKGCAQALKGFGARVIVTEIDPICALQAAMEGYEVTTLEEAIREVDIFVTTTGCKDIITG 285 (434)
T ss_pred hhhheecccEEEEeccCc-cchhHHHHHhhcCcEEEEeccCchHHHHHHhhccEeeeHHHhhhcCCEEEEccCCcchhhH
Confidence 356778999999999999 59999999999999999986442 3578999999999999999999877
Q ss_pred CCc---CCCcEEEEeeecC
Q 017184 302 SWI---KPGAVIIDVGINP 317 (375)
Q Consensus 302 ~~v---k~gavVIDvgin~ 317 (375)
+++ |.+++|.++|+.-
T Consensus 286 ~H~~~mk~d~IvCN~Ghfd 304 (434)
T KOG1370|consen 286 EHFDQMKNDAIVCNIGHFD 304 (434)
T ss_pred HHHHhCcCCcEEecccccc
Confidence 655 7899999999764
No 98
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.78 E-value=4.3e-05 Score=71.26 Aligned_cols=112 Identities=19% Similarity=0.321 Sum_probs=72.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-CCH-----------------HhhccCCcEEEEccCCCCc-
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-KNP-----------------EEITRQADIIISAVGQPNM- 298 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-~~L-----------------~~~l~~ADIVIsAvG~p~~- 298 (375)
++++||+|+|||.|.+ |.-.+..|+..|+.|+++...- +.+ .+.+..+|+||+|++.+.+
T Consensus 6 l~l~~k~vLVIGgG~v-a~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT~d~elN 84 (202)
T PRK06718 6 IDLSNKRVVIVGGGKV-AGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAATNDPRVN 84 (202)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcCCCHHHH
Confidence 5789999999999985 9999999999999999986542 111 2457889999999998764
Q ss_pred --ccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchhhhhhh---cceeccCCCCccHHHHHHHHHHHH
Q 017184 299 --VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEV---ASAITPVPGGVGPMTIAMLLSNTL 365 (375)
Q Consensus 299 --I~~~~vk~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~---a~~iTPVPGGVGp~T~amLl~N~v 365 (375)
|.... +.+. .+++.-++.. +|+-|..+.+. .-+|+ -||.+|..+..|=+++-
T Consensus 85 ~~i~~~a-~~~~-lvn~~d~~~~-----------~~f~~Pa~~~~g~l~iaIs--T~G~sP~la~~lr~~ie 141 (202)
T PRK06718 85 EQVKEDL-PENA-LFNVITDAES-----------GNVVFPSALHRGKLTISVS--TDGASPKLAKKIRDELE 141 (202)
T ss_pred HHHHHHH-HhCC-cEEECCCCcc-----------CeEEEeeEEEcCCeEEEEE--CCCCChHHHHHHHHHHH
Confidence 43333 4454 4444423211 23333332222 22343 47889988877655444
No 99
>PLN03139 formate dehydrogenase; Provisional
Probab=97.76 E-value=4.9e-05 Score=77.63 Aligned_cols=133 Identities=17% Similarity=0.255 Sum_probs=88.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------CCHHhhccCCcEEEEccCCC----Ccc
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQP----NMV 299 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------~~L~~~l~~ADIVIsAvG~p----~~I 299 (375)
.++.||+|.|||.|.+ |+.++..|...|+.|..++++. .++++.++++|+|+..++.. +++
T Consensus 195 ~~L~gktVGIVG~G~I-G~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lPlt~~T~~li 273 (386)
T PLN03139 195 YDLEGKTVGTVGAGRI-GRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMF 273 (386)
T ss_pred cCCCCCEEEEEeecHH-HHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCCCCHHHHHHh
Confidence 4799999999999996 9999999999999999887541 26888999999999998843 256
Q ss_pred cCC---CcCCCcEEEEeeecCCCCCC-----CCCCce---eecccchhhhh-------h-hcceeccCCCCccHHHHHHH
Q 017184 300 RGS---WIKPGAVIIDVGINPVEDAK-----SPRGYR---LVGDVCYEEAC-------E-VASAITPVPGGVGPMTIAML 360 (375)
Q Consensus 300 ~~~---~vk~gavVIDvgin~~~~~~-----~~~g~k---l~GDVd~~~v~-------~-~a~~iTPVPGGVGp~T~amL 360 (375)
+.+ .+|+|+++||++--.+-|.. -..| + ...||=+.+=. . -.-.+||=-+|.-.-+..-+
T Consensus 274 ~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG-~l~GAaLDV~~~EPlp~d~pL~~~pNvilTPHiag~t~~~~~r~ 352 (386)
T PLN03139 274 NKERIAKMKKGVLIVNNARGAIMDTQAVADACSSG-HIGGYGGDVWYPQPAPKDHPWRYMPNHAMTPHISGTTIDAQLRY 352 (386)
T ss_pred CHHHHhhCCCCeEEEECCCCchhhHHHHHHHHHcC-CceEEEEcCCCCCCCCCCChhhcCCCeEEcccccccCHHHHHHH
Confidence 554 56999999999965432200 0011 3 34577432210 0 12357777777654444444
Q ss_pred HHHHHHHHHHHh
Q 017184 361 LSNTLTSAKRVH 372 (375)
Q Consensus 361 l~N~v~a~~~~~ 372 (375)
...+++..++|+
T Consensus 353 ~~~~~~nl~~~~ 364 (386)
T PLN03139 353 AAGVKDMLDRYF 364 (386)
T ss_pred HHHHHHHHHHHH
Confidence 444445445554
No 100
>PRK12862 malic enzyme; Reviewed
Probab=97.73 E-value=0.00022 Score=78.54 Aligned_cols=172 Identities=15% Similarity=0.232 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHHHcC-CeEEEEeCCCCCCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccc
Q 017184 129 ATYVRNKKKACQSVG-INSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPL 207 (375)
Q Consensus 129 ~~Yv~~k~k~a~~~G-I~~~~~~l~~~vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~ 207 (375)
.--...|.-.++.+| |++.-+.+... +.+|+++.++.+- |++-||++.= -..-+--+|++....+-|+.-||.
T Consensus 94 ~pv~egK~~l~~~~~gi~~~~i~~~~~-d~d~~v~~v~~~~--p~f~~i~~ED--~~~~~~f~i~~~~~~~~~ip~f~D- 167 (763)
T PRK12862 94 KPVMEGKAVLFKKFAGIDVFDIELDES-DPDKLVEIVAALE--PTFGGINLED--IKAPECFYIERELRERMKIPVFHD- 167 (763)
T ss_pred cchHHHHHHHHHhhcCCCccccccCCC-CHHHHHHHHHHhC--CCcceeeeec--ccCchHHHHHHHHHhcCCCceEec-
Confidence 444567777777765 88877877643 7799999999987 7788877641 111123455555544445555552
Q ss_pred hhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCC---eEEEEcCC---------
Q 017184 208 NIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA---TVSIVHSR--------- 275 (375)
Q Consensus 208 N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gA---tVtv~hs~--------- 275 (375)
+..+-.-.+..|++..++-.+.+++.-++|+.|+|.. |..++.+|...|. .+++|+++
T Consensus 168 ---------D~~GTa~v~la~l~~a~~~~~~~~~~~~iv~~GaGaa-g~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~ 237 (763)
T PRK12862 168 ---------DQHGTAIIVAAALLNGLKLVGKDIEDVKLVASGAGAA-ALACLDLLVSLGVKRENIWVTDIKGVVYEGRTE 237 (763)
T ss_pred ---------CcccHHHHHHHHHHHHHHHhCCChhhcEEEEEChhHH-HHHHHHHHHHcCCCcccEEEEcCCCeeeCCCCc
Confidence 2333334556788999999999999999999999998 9999999999997 68898754
Q ss_pred --------------CCCHHhhccCCcEEEEccCCCCcccCCCcCC---CcEEEEeeecCC
Q 017184 276 --------------TKNPEEITRQADIIISAVGQPNMVRGSWIKP---GAVIIDVGINPV 318 (375)
Q Consensus 276 --------------t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~---gavVIDvgin~~ 318 (375)
..+|.+.++.+|++|-..+ |+.++++|++. .-+|+=+. ||.
T Consensus 238 ~l~~~~~~~a~~~~~~~l~e~~~~~~v~iG~s~-~g~~~~~~v~~M~~~piifals-NP~ 295 (763)
T PRK12862 238 LMDPWKARYAQKTDARTLAEVIEGADVFLGLSA-AGVLKPEMVKKMAPRPLIFALA-NPT 295 (763)
T ss_pred cccHHHHHHhhhcccCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEeCC-CCc
Confidence 1358899999999998777 89999999854 66777766 443
No 101
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=97.72 E-value=7.5e-05 Score=76.69 Aligned_cols=79 Identities=25% Similarity=0.459 Sum_probs=66.3
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC----------CCHHhhccCCcEEEEccCCC----CcccCC
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------KNPEEITRQADIIISAVGQP----NMVRGS 302 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t----------~~L~~~l~~ADIVIsAvG~p----~~I~~~ 302 (375)
+.+|.||++.|||.|.+ |+.+|.+|...|++|..++++. .++++.+++||+|+..++.. +++..+
T Consensus 146 ~~~L~gktvGIiG~G~I-G~~vA~~~~~fGm~V~~~d~~~~~~~~~~~~~~~l~ell~~sDiVslh~Plt~~T~~li~~~ 224 (409)
T PRK11790 146 SFEVRGKTLGIVGYGHI-GTQLSVLAESLGMRVYFYDIEDKLPLGNARQVGSLEELLAQSDVVSLHVPETPSTKNMIGAE 224 (409)
T ss_pred cccCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCCcccccCCceecCCHHHHHhhCCEEEEcCCCChHHhhccCHH
Confidence 35799999999999997 9999999999999999887542 26899999999999998842 367654
Q ss_pred ---CcCCCcEEEEeeec
Q 017184 303 ---WIKPGAVIIDVGIN 316 (375)
Q Consensus 303 ---~vk~gavVIDvgin 316 (375)
.+|+|+++|+++--
T Consensus 225 ~l~~mk~ga~lIN~aRG 241 (409)
T PRK11790 225 ELALMKPGAILINASRG 241 (409)
T ss_pred HHhcCCCCeEEEECCCC
Confidence 56999999999943
No 102
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.69 E-value=2.5e-05 Score=70.29 Aligned_cols=78 Identities=31% Similarity=0.458 Sum_probs=57.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC----------------C------------------------CC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------T------------------------KN 278 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~----------------t------------------------~~ 278 (375)
.+..++|+|+|.|. ||+.++.+|...|++|++.+.. + ..
T Consensus 17 ~~~p~~vvv~G~G~-vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (168)
T PF01262_consen 17 GVPPAKVVVTGAGR-VGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESN 95 (168)
T ss_dssp EE-T-EEEEESTSH-HHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHH
T ss_pred CCCCeEEEEECCCH-HHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHH
Confidence 34678999999988 5999999999999999998643 1 13
Q ss_pred HHhhccCCcEEEEcc-----CCCCcccCCCc---CCCcEEEEeeecC
Q 017184 279 PEEITRQADIIISAV-----GQPNMVRGSWI---KPGAVIIDVGINP 317 (375)
Q Consensus 279 L~~~l~~ADIVIsAv-----G~p~~I~~~~v---k~gavVIDvgin~ 317 (375)
+.+.++.+|+||+++ ..|.+|+.+++ ++|.+|+|+.+..
T Consensus 96 f~~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~ 142 (168)
T PF01262_consen 96 FAEFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ 142 (168)
T ss_dssp HHHHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred HHHHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence 567889999999654 25778988765 8899999998764
No 103
>PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed
Probab=97.69 E-value=0.00029 Score=77.47 Aligned_cols=172 Identities=16% Similarity=0.245 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHHcC-CeEEEEeCCCCCCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccc
Q 017184 129 ATYVRNKKKACQSVG-INSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPL 207 (375)
Q Consensus 129 ~~Yv~~k~k~a~~~G-I~~~~~~l~~~vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~ 207 (375)
.--.+.|.-.++.+| |++..+.+... +.+|+++.++.+- |++-||++.== ..-+--+|++....+-|+.-||.-
T Consensus 86 ~pv~egK~~l~~~~~gid~~~i~~~~~-d~de~v~~v~~~~--p~~g~i~~ED~--~~p~~f~i~~~~~~~~~ip~f~DD 160 (752)
T PRK07232 86 KPVMEGKGVLFKKFAGIDVFDIEVDEE-DPDKFIEAVAALE--PTFGGINLEDI--KAPECFYIEEKLRERMDIPVFHDD 160 (752)
T ss_pred ccHHHHHHHHHHhhcCCCccccccCCC-CHHHHHHHHHHhC--CCccEEeeeec--CCchHHHHHHHHHHhcCCCeeccc
Confidence 444567777777765 88877777643 6789999998887 77888886411 111234455555444455555532
Q ss_pred hhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCC---eEEEEcCC---------
Q 017184 208 NIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA---TVSIVHSR--------- 275 (375)
Q Consensus 208 N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gA---tVtv~hs~--------- 275 (375)
..+-.-.+..|++..|+-.+.+++.-++++.|+|.. |-.++.+|...|. .+++|+++
T Consensus 161 ----------~~GTa~v~lA~l~na~~~~~~~~~~~~iv~~GaGaa-g~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~ 229 (752)
T PRK07232 161 ----------QHGTAIISAAALLNALELVGKKIEDVKIVVSGAGAA-AIACLNLLVALGAKKENIIVCDSKGVIYKGRTE 229 (752)
T ss_pred ----------cchHHHHHHHHHHHHHHHhCCChhhcEEEEECccHH-HHHHHHHHHHcCCCcccEEEEcCCCeecCCCcc
Confidence 333333455788999999999999999999999997 9999999999987 68898754
Q ss_pred --------------CCCHHhhccCCcEEEEccCCCCcccCCCcCC---CcEEEEeeecCC
Q 017184 276 --------------TKNPEEITRQADIIISAVGQPNMVRGSWIKP---GAVIIDVGINPV 318 (375)
Q Consensus 276 --------------t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~---gavVIDvgin~~ 318 (375)
..+|.+.++.+|++|-..+ |+.++++|++. ..+|+=+. ||.
T Consensus 230 ~~~~~k~~~a~~~~~~~l~~~i~~~~v~iG~s~-~g~~~~~~v~~M~~~piifals-NP~ 287 (752)
T PRK07232 230 GMDEWKAAYAVDTDARTLAEAIEGADVFLGLSA-AGVLTPEMVKSMADNPIIFALA-NPD 287 (752)
T ss_pred cccHHHHHHhccCCCCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEecC-CCC
Confidence 1368899999999997777 89999999854 66777776 443
No 104
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=97.68 E-value=8.2e-05 Score=78.67 Aligned_cols=81 Identities=21% Similarity=0.275 Sum_probs=67.0
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC-------------CCCHHhhccCCcEEEEccCCC----Ccc
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------TKNPEEITRQADIIISAVGQP----NMV 299 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~-------------t~~L~~~l~~ADIVIsAvG~p----~~I 299 (375)
+.++.||++.|||.|.+ |+.+|..|...|++|+.++++ ..++.+.+++||+|+..++.. +++
T Consensus 133 g~~l~gktvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li 211 (525)
T TIGR01327 133 GTELYGKTLGVIGLGRI-GSIVAKRAKAFGMKVLAYDPYISPERAEQLGVELVDDLDELLARADFITVHTPLTPETRGLI 211 (525)
T ss_pred ccccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEcCCHHHHHhhCCEEEEccCCChhhccCc
Confidence 45799999999999996 999999999999999998763 136889999999999999843 356
Q ss_pred cCC---CcCCCcEEEEeeecCC
Q 017184 300 RGS---WIKPGAVIIDVGINPV 318 (375)
Q Consensus 300 ~~~---~vk~gavVIDvgin~~ 318 (375)
..+ .+|+|+++||++--.+
T Consensus 212 ~~~~l~~mk~ga~lIN~aRG~~ 233 (525)
T TIGR01327 212 GAEELAKMKKGVIIVNCARGGI 233 (525)
T ss_pred CHHHHhcCCCCeEEEEcCCCce
Confidence 543 5699999999996554
No 105
>PRK08291 ectoine utilization protein EutC; Validated
Probab=97.67 E-value=0.00016 Score=71.94 Aligned_cols=87 Identities=21% Similarity=0.336 Sum_probs=66.9
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhh-CC-CeEEEEcCC---------------------CCCHHhhc
Q 017184 227 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSR---------------------TKNPEEIT 283 (375)
Q Consensus 227 ~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~-~g-AtVtv~hs~---------------------t~~L~~~l 283 (375)
.+++...... .-..++++|||+|+. |+..+..|.. ++ .+|++++|+ ..++++.+
T Consensus 119 ~~~~a~~~la--~~~~~~v~IiGaG~~-a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~al 195 (330)
T PRK08291 119 AGAVAARHLA--REDASRAAVIGAGEQ-ARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTVARDVHEAV 195 (330)
T ss_pred HHHHHHHHhC--CCCCCEEEEECCCHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEEeCCHHHHH
Confidence 5555555322 335689999999997 9987777764 55 479999876 13566788
Q ss_pred cCCcEEEEccCCCCc-ccCCCcCCCcEEEEeeec
Q 017184 284 RQADIIISAVGQPNM-VRGSWIKPGAVIIDVGIN 316 (375)
Q Consensus 284 ~~ADIVIsAvG~p~~-I~~~~vk~gavVIDvgin 316 (375)
++|||||++++.... ++.+|+++|+.|+.+|.+
T Consensus 196 ~~aDiVi~aT~s~~p~i~~~~l~~g~~v~~vg~d 229 (330)
T PRK08291 196 AGADIIVTTTPSEEPILKAEWLHPGLHVTAMGSD 229 (330)
T ss_pred ccCCEEEEeeCCCCcEecHHHcCCCceEEeeCCC
Confidence 999999999997664 788999999999999865
No 106
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=97.67 E-value=9.2e-05 Score=78.29 Aligned_cols=81 Identities=22% Similarity=0.288 Sum_probs=66.8
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC------------CCHHhhccCCcEEEEccCCC----Cccc
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVGQP----NMVR 300 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t------------~~L~~~l~~ADIVIsAvG~p----~~I~ 300 (375)
+.++.||++.|||.|.+ |+.+|..|...|++|..++++. .++.+.+++||+|+.+++.. +++.
T Consensus 135 g~~l~gktvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDiV~l~lP~t~~t~~li~ 213 (526)
T PRK13581 135 GVELYGKTLGIIGLGRI-GSEVAKRAKAFGMKVIAYDPYISPERAAQLGVELVSLDELLARADFITLHTPLTPETRGLIG 213 (526)
T ss_pred ccccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEEcHHHHHhhCCEEEEccCCChHhhcCcC
Confidence 35689999999999996 9999999999999999987631 15788999999999999853 4565
Q ss_pred CC---CcCCCcEEEEeeecCC
Q 017184 301 GS---WIKPGAVIIDVGINPV 318 (375)
Q Consensus 301 ~~---~vk~gavVIDvgin~~ 318 (375)
.+ .+|+|+++||++--.+
T Consensus 214 ~~~l~~mk~ga~lIN~aRG~~ 234 (526)
T PRK13581 214 AEELAKMKPGVRIINCARGGI 234 (526)
T ss_pred HHHHhcCCCCeEEEECCCCce
Confidence 43 5699999999996544
No 107
>PRK08618 ornithine cyclodeaminase; Validated
Probab=97.60 E-value=0.00032 Score=69.65 Aligned_cols=74 Identities=20% Similarity=0.227 Sum_probs=60.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHHh-hCCC-eEEEEcCCC---------------------CCHHhhccCCcEEEEccCCCC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQ-REDA-TVSIVHSRT---------------------KNPEEITRQADIIISAVGQPN 297 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~-~~gA-tVtv~hs~t---------------------~~L~~~l~~ADIVIsAvG~p~ 297 (375)
..++++|||.|+. |+..+..++ .+++ +|++++++. .++++.++++||||++++.++
T Consensus 126 ~~~~v~iiGaG~~-a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~ 204 (325)
T PRK08618 126 DAKTLCLIGTGGQ-AKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKT 204 (325)
T ss_pred CCcEEEEECCcHH-HHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCC
Confidence 5789999999997 988776654 4564 788887751 346678899999999999877
Q ss_pred c-ccCCCcCCCcEEEEeeec
Q 017184 298 M-VRGSWIKPGAVIIDVGIN 316 (375)
Q Consensus 298 ~-I~~~~vk~gavVIDvgin 316 (375)
. +. +|+++|+.|+-+|.+
T Consensus 205 p~i~-~~l~~G~hV~~iGs~ 223 (325)
T PRK08618 205 PVFS-EKLKKGVHINAVGSF 223 (325)
T ss_pred cchH-HhcCCCcEEEecCCC
Confidence 5 68 999999999999865
No 108
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=97.58 E-value=0.00026 Score=74.78 Aligned_cols=90 Identities=27% Similarity=0.446 Sum_probs=67.5
Q ss_pred HHHHHHHHHhCC----------CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------------
Q 017184 227 KGCIELLHRYGF----------DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------- 276 (375)
Q Consensus 227 ~gvi~lL~~~~i----------~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-------------------- 276 (375)
.++++..++++. ...|.+|+|+|.|.+ |...+..+...||.|+++..+.
T Consensus 140 ~Av~~aa~~~~~~~~g~~taaG~~pg~kVlViGaG~i-GL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e 218 (509)
T PRK09424 140 RAVIEAAHEFGRFFTGQITAAGKVPPAKVLVIGAGVA-GLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEE 218 (509)
T ss_pred HHHHHHHHHhcccCCCceeccCCcCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEecccc
Confidence 677777776653 346899999999886 9999999999999988876541
Q ss_pred -------------CC--------HHhhccCCcEEEEccCCCC-----cccCCC---cCCCcEEEEeeecC
Q 017184 277 -------------KN--------PEEITRQADIIISAVGQPN-----MVRGSW---IKPGAVIIDVGINP 317 (375)
Q Consensus 277 -------------~~--------L~~~l~~ADIVIsAvG~p~-----~I~~~~---vk~gavVIDvgin~ 317 (375)
.+ +.+.++.+|+||.++|.|. +++.++ +|+|.+|+|+|+.+
T Consensus 219 ~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~ 288 (509)
T PRK09424 219 EGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAEN 288 (509)
T ss_pred ccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCC
Confidence 01 0122367999999999744 565554 58999999999863
No 109
>PRK06141 ornithine cyclodeaminase; Validated
Probab=97.55 E-value=0.00034 Score=69.24 Aligned_cols=77 Identities=30% Similarity=0.380 Sum_probs=59.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhh-CC-CeEEEEcCCC--------------------CCHHhhccCCcEEEEccCCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSRT--------------------KNPEEITRQADIIISAVGQP 296 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~-~g-AtVtv~hs~t--------------------~~L~~~l~~ADIVIsAvG~p 296 (375)
....|++.|||.|.. |++.+..+.. ++ .+|++++|+. .++++.+++|||||++++.+
T Consensus 122 ~~~~~~v~iiG~G~~-a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~~aDIVi~aT~s~ 200 (314)
T PRK06141 122 RKDASRLLVVGTGRL-ASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVRQADIISCATLST 200 (314)
T ss_pred CCCCceEEEECCcHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHhcCCEEEEeeCCC
Confidence 346899999999986 9999875543 44 6899998752 24567789999999999987
Q ss_pred Cc-ccCCCcCCCcEEEEeeec
Q 017184 297 NM-VRGSWIKPGAVIIDVGIN 316 (375)
Q Consensus 297 ~~-I~~~~vk~gavVIDvgin 316 (375)
.. ++.+|+++|+.|.=+|.+
T Consensus 201 ~pvl~~~~l~~g~~i~~ig~~ 221 (314)
T PRK06141 201 EPLVRGEWLKPGTHLDLVGNF 221 (314)
T ss_pred CCEecHHHcCCCCEEEeeCCC
Confidence 65 788999999954445543
No 110
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=97.53 E-value=0.00015 Score=72.43 Aligned_cols=81 Identities=25% Similarity=0.403 Sum_probs=66.9
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC------------CCHHhhccCCcEEEEccCC----CCccc
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVGQ----PNMVR 300 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t------------~~L~~~l~~ADIVIsAvG~----p~~I~ 300 (375)
+.+++||++-|||.|.+ |+.+|..+..-|+.|...+++. -++.+.+++||||+..++- -|+|.
T Consensus 141 ~~~l~gktvGIiG~GrI-G~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~ell~~sDii~l~~Plt~~T~hLin 219 (324)
T COG1052 141 GFDLRGKTLGIIGLGRI-GQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVDLDELLAESDIISLHCPLTPETRHLIN 219 (324)
T ss_pred ccCCCCCEEEEECCCHH-HHHHHHHHhcCCCEEEEECCCCChHHHhhcCceeccHHHHHHhCCEEEEeCCCChHHhhhcC
Confidence 46899999999999997 9999999998889999888663 1377999999999988873 24676
Q ss_pred CC---CcCCCcEEEEeeecCC
Q 017184 301 GS---WIKPGAVIIDVGINPV 318 (375)
Q Consensus 301 ~~---~vk~gavVIDvgin~~ 318 (375)
.+ .+|+|+++|++|--.+
T Consensus 220 ~~~l~~mk~ga~lVNtaRG~~ 240 (324)
T COG1052 220 AEELAKMKPGAILVNTARGGL 240 (324)
T ss_pred HHHHHhCCCCeEEEECCCccc
Confidence 65 5699999999985543
No 111
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.51 E-value=0.00012 Score=65.45 Aligned_cols=74 Identities=26% Similarity=0.408 Sum_probs=55.2
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------CCHHhhccCCcEEEEccCCCC----cc-c---
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN----MV-R--- 300 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------~~L~~~l~~ADIVIsAvG~p~----~I-~--- 300 (375)
++|-+||-|.+ |.+++..|++.|.+|++++++. .++.+.++++|+||+++..+. .+ .
T Consensus 2 ~~Ig~IGlG~m-G~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i 80 (163)
T PF03446_consen 2 MKIGFIGLGNM-GSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI 80 (163)
T ss_dssp BEEEEE--SHH-HHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred CEEEEEchHHH-HHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence 58999999986 9999999999999999999873 467788999999999998643 12 2
Q ss_pred CCCcCCCcEEEEeeecC
Q 017184 301 GSWIKPGAVIIDVGINP 317 (375)
Q Consensus 301 ~~~vk~gavVIDvgin~ 317 (375)
...+++|.++||.+...
T Consensus 81 ~~~l~~g~iiid~sT~~ 97 (163)
T PF03446_consen 81 LAGLRPGKIIIDMSTIS 97 (163)
T ss_dssp GGGS-TTEEEEE-SS--
T ss_pred hhccccceEEEecCCcc
Confidence 24568899999998653
No 112
>COG0281 SfcA Malic enzyme [Energy production and conversion]
Probab=97.50 E-value=0.00046 Score=70.94 Aligned_cols=170 Identities=17% Similarity=0.260 Sum_probs=124.3
Q ss_pred chHHHHHHHHHHHHHc-CCeEEEEeCCCCCCHHHHHHHHHHhhcCCCccEEEEeCC-CCCCCCHHHHHhhCCcccccCcc
Q 017184 127 DSATYVRNKKKACQSV-GINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLP-LPCHIDEQSILNAVSMEKDVDGF 204 (375)
Q Consensus 127 aS~~Yv~~k~k~a~~~-GI~~~~~~l~~~vs~~el~~~I~~LN~D~~V~GIlVqlP-Lp~~i~~~~i~~~I~p~KDVDGl 204 (375)
++.--.+.|.-.++++ ||++.-+.++. -+.+|+.+.|+.+. |.+-||+++-= .|+ -..+...+.-+.||.-|
T Consensus 98 ag~pVmeGKa~Lfk~faGid~~pI~ld~-~~~~ei~~~Vkal~--p~FgginLedi~ap~---cf~ie~~lr~~~~IPvF 171 (432)
T COG0281 98 AGKPVMEGKAVLFKAFAGIDVLPIELDV-GTNNEIIEFVKALE--PTFGGINLEDIDAPR---CFAIEERLRYRMNIPVF 171 (432)
T ss_pred cCcchhhhHHHHHHHhcCCCceeeEeeC-CChHHHHHHHHHhh--hcCCCcceeecccch---hhHHHHHHhhcCCCCcc
Confidence 4444566787777775 69999899875 46678999999997 57999998732 122 12344455557777777
Q ss_pred ccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCC---eEEEEcCCC-----
Q 017184 205 HPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA---TVSIVHSRT----- 276 (375)
Q Consensus 205 ~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gA---tVtv~hs~t----- 276 (375)
|.-- .+-.--|..|++..|+-.|.+|+..++++.|+|-. |-.++.+|...|. .|++|+|+-
T Consensus 172 hDDq----------qGTaiv~lA~llnalk~~gk~l~d~kiv~~GAGAA-giaia~~l~~~g~~~~~i~~~D~~G~l~~~ 240 (432)
T COG0281 172 HDDQ----------QGTAIVTLAALLNALKLTGKKLKDQKIVINGAGAA-GIAIADLLVAAGVKEENIFVVDRKGLLYDG 240 (432)
T ss_pred cccc----------cHHHHHHHHHHHHHHHHhCCCccceEEEEeCCcHH-HHHHHHHHHHhCCCcccEEEEecCCcccCC
Confidence 6433 22222345788999999999999999999999987 9999999999997 599998761
Q ss_pred -CCH-------------------HhhccCCcEEEEccCCCCcccCCCcCC---CcEEEEee
Q 017184 277 -KNP-------------------EEITRQADIIISAVGQPNMVRGSWIKP---GAVIIDVG 314 (375)
Q Consensus 277 -~~L-------------------~~~l~~ADIVIsAvG~p~~I~~~~vk~---gavVIDvg 314 (375)
.++ .+.+..||++|...|. +.+++|||+. +.+|+=+.
T Consensus 241 r~~~~~~~~k~~~a~~~~~~~~~~~~~~~adv~iG~S~~-G~~t~e~V~~Ma~~PiIfala 300 (432)
T COG0281 241 REDLTMNQKKYAKAIEDTGERTLDLALAGADVLIGVSGV-GAFTEEMVKEMAKHPIIFALA 300 (432)
T ss_pred CcccccchHHHHHHHhhhccccccccccCCCEEEEcCCC-CCcCHHHHHHhccCCEEeecC
Confidence 110 2346789999988887 8899998854 45666665
No 113
>PRK07340 ornithine cyclodeaminase; Validated
Probab=97.48 E-value=0.00068 Score=66.92 Aligned_cols=77 Identities=13% Similarity=0.125 Sum_probs=62.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhh-CCC-eEEEEcCCC-------------------CCHHhhccCCcEEEEccCCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQR-EDA-TVSIVHSRT-------------------KNPEEITRQADIIISAVGQP 296 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~-~gA-tVtv~hs~t-------------------~~L~~~l~~ADIVIsAvG~p 296 (375)
-+...++++|||.|.. |+..+..+.. ++. +|.+++++. .++++.+++|||||++|+.+
T Consensus 121 a~~~~~~v~IiGaG~q-a~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~~~~~av~~aDiVitaT~s~ 199 (304)
T PRK07340 121 APAPPGDLLLIGTGVQ-ARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPLDGEAIPEAVDLVVTATTSR 199 (304)
T ss_pred CCCCCCEEEEECCcHH-HHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEECCHHHHhhcCCEEEEccCCC
Confidence 3457899999999996 9999888864 554 689888751 25677889999999999988
Q ss_pred Cc-ccCCCcCCCcEEEEeeec
Q 017184 297 NM-VRGSWIKPGAVIIDVGIN 316 (375)
Q Consensus 297 ~~-I~~~~vk~gavVIDvgin 316 (375)
+. ++. |+|||+.|.=+|.+
T Consensus 200 ~Pl~~~-~~~~g~hi~~iGs~ 219 (304)
T PRK07340 200 TPVYPE-AARAGRLVVAVGAF 219 (304)
T ss_pred CceeCc-cCCCCCEEEecCCC
Confidence 76 565 89999999999965
No 114
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.45 E-value=0.00017 Score=59.93 Aligned_cols=60 Identities=30% Similarity=0.520 Sum_probs=46.1
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-----------CCHHhhccCCcEEEEccCCCCc
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-----------KNPEEITRQADIIISAVGQPNM 298 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-----------~~L~~~l~~ADIVIsAvG~p~~ 298 (375)
++++||+|+|||.|.+ |..-+..|++.||+|+++.... +.+++.+..+|+||.|++.+.+
T Consensus 3 l~l~~~~vlVvGgG~v-a~~k~~~Ll~~gA~v~vis~~~~~~~~~i~~~~~~~~~~l~~~~lV~~at~d~~~ 73 (103)
T PF13241_consen 3 LDLKGKRVLVVGGGPV-AARKARLLLEAGAKVTVISPEIEFSEGLIQLIRREFEEDLDGADLVFAATDDPEL 73 (103)
T ss_dssp E--TT-EEEEEEESHH-HHHHHHHHCCCTBEEEEEESSEHHHHTSCEEEESS-GGGCTTESEEEE-SS-HHH
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCchhhhhhHHHHHhhhHHHHHhhheEEEecCCCHHH
Confidence 4789999999999995 9999999999999999997662 3456778899999999987653
No 115
>PRK12861 malic enzyme; Reviewed
Probab=97.38 E-value=0.00078 Score=74.20 Aligned_cols=172 Identities=16% Similarity=0.221 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHHHcC-CeEEEEeCCCCCCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccc
Q 017184 129 ATYVRNKKKACQSVG-INSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPL 207 (375)
Q Consensus 129 ~~Yv~~k~k~a~~~G-I~~~~~~l~~~vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~ 207 (375)
.--.+.|.-.++++| |++..+.+.. -+.+|+++.++.+. |.+-||++. =-..-+--+|++....+=|+.-||.-
T Consensus 90 ~pvmeGK~~L~~~~agid~~di~~~~-~dpd~~v~~v~a~~--~~fg~i~lE--D~~~p~~f~il~~~~~~~~ipvf~DD 164 (764)
T PRK12861 90 KPVMEGKAVLFKKFAGIDVFDIEINE-TDPDKLVDIIAGLE--PTFGGINLE--DIKAPECFTVERKLRERMKIPVFHDD 164 (764)
T ss_pred cchHHHHHHHHhhccCCCccccccCC-CCHHHHHHHHHHHH--hhcCCceee--eccCchHHHHHHHHHhcCCCCeeccc
Confidence 344567777777765 8987777764 56789999998887 467775542 11111233444444332255555532
Q ss_pred hhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCC---eEEEEcCC---------
Q 017184 208 NIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA---TVSIVHSR--------- 275 (375)
Q Consensus 208 N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gA---tVtv~hs~--------- 275 (375)
..+-.-.+..|++..|+-.+.+++.-++|+.|+|-. |..++.+|...|. .+++|+++
T Consensus 165 ----------~qGTa~v~lA~llnal~~~gk~l~d~~iv~~GAGaA-g~~ia~~l~~~G~~~~~i~~~D~~Gli~~~r~~ 233 (764)
T PRK12861 165 ----------QHGTAITVSAAFINGLKVVGKSIKEVKVVTSGAGAA-ALACLDLLVDLGLPVENIWVTDIEGVVYRGRTT 233 (764)
T ss_pred ----------cchHHHHHHHHHHHHHHHhCCChhHcEEEEECHhHH-HHHHHHHHHHcCCChhhEEEEcCCCeeeCCCcc
Confidence 223223455788999999999999999999999998 9999999999998 68999754
Q ss_pred --------------CCCHHhhccCCcEEEEccCCCCcccCCCcCC---CcEEEEeeecCC
Q 017184 276 --------------TKNPEEITRQADIIISAVGQPNMVRGSWIKP---GAVIIDVGINPV 318 (375)
Q Consensus 276 --------------t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~---gavVIDvgin~~ 318 (375)
..+|.+.++.+|++|-..+ |+.+++||++. ..+|+=+. ||.
T Consensus 234 ~l~~~k~~~a~~~~~~~L~eai~~advliG~S~-~g~ft~e~v~~Ma~~PIIFaLs-NPt 291 (764)
T PRK12861 234 LMDPDKERFAQETDARTLAEVIGGADVFLGLSA-GGVLKAEMLKAMAARPLILALA-NPT 291 (764)
T ss_pred cCCHHHHHHHhhcCCCCHHHHHhcCCEEEEcCC-CCCCCHHHHHHhccCCEEEECC-CCC
Confidence 1358899999999997776 89999999854 66777776 554
No 116
>PF08501 Shikimate_dh_N: Shikimate dehydrogenase substrate binding domain; InterPro: IPR013708 This domain is the substrate binding domain of shikimate dehydrogenase []. Shikimate dehydrogenase catalyses the fourth step of the mycobacterial Shikimate pathway, which results in the biosynthesis of chorismate. Chorismate is a precursor of aromatic amino acids, naphthoquinones, menaquinones and mycobactins [, ]. This pathway is an important target for antibacterial agents, especially against Mycobacterium tuberculosis, since it does not occur in mammals.; GO: 0004764 shikimate 3-dehydrogenase (NADP+) activity, 0055114 oxidation-reduction process; PDB: 3U62_A 2EGG_A 1P74_B 1P77_A 3O8Q_A 3TNL_C 3TOZ_G 1NYT_C 1VI2_B 1NPD_A ....
Probab=97.36 E-value=0.00017 Score=58.06 Aligned_cols=48 Identities=13% Similarity=0.354 Sum_probs=40.8
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhhcCCCccEEEEeCCCCC
Q 017184 134 NKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPC 184 (375)
Q Consensus 134 ~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I~~LN~D~~V~GIlVqlPLp~ 184 (375)
.-++.+++.|++..|..++ +.++++.+.++.+.. +++.|++|++|+++
T Consensus 14 ~hn~~f~~~g~~~~Y~~~~--v~~~~l~~~~~~~~~-~~~~G~~VT~P~K~ 61 (83)
T PF08501_consen 14 IHNAAFEALGLDAVYIPFE--VEPEDLEDFLDALRA-PNFRGLNVTMPHKE 61 (83)
T ss_dssp HHHHHHHHTTSSEEEEEEE--TSTTCHHHHHHHHHH-TTESEEEE-TTSTT
T ss_pred HHHHHHHHcCCCcEEEEee--cCHHHHHHHHHHHhc-CCCCeeeecchHHH
Confidence 3468899999999999986 567788888888888 78999999999986
No 117
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.33 E-value=0.00033 Score=62.87 Aligned_cols=115 Identities=20% Similarity=0.215 Sum_probs=71.0
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC-CCCH--------------HhhccCCcEEEEccCCCCc---
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-TKNP--------------EEITRQADIIISAVGQPNM--- 298 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~-t~~L--------------~~~l~~ADIVIsAvG~p~~--- 298 (375)
.++++||+|+|||.|.+ |.-.+..|+..|++|+++... .+++ ++.+.++|+||.+++.+..
T Consensus 8 ~l~l~~~~vlVvGGG~v-a~rka~~Ll~~ga~V~VIsp~~~~~l~~l~~i~~~~~~~~~~dl~~a~lViaaT~d~e~N~~ 86 (157)
T PRK06719 8 MFNLHNKVVVIIGGGKI-AYRKASGLKDTGAFVTVVSPEICKEMKELPYITWKQKTFSNDDIKDAHLIYAATNQHAVNMM 86 (157)
T ss_pred EEEcCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCccCHHHHhccCcEEEecccChhcCCCceEEEECCCCHHHHHH
Confidence 36899999999999995 999999999999999998533 1112 1347889999999997653
Q ss_pred ccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchhhhhh---hcceeccCCCCccHHHHHHHHHHHHHH
Q 017184 299 VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACE---VASAITPVPGGVGPMTIAMLLSNTLTS 367 (375)
Q Consensus 299 I~~~~vk~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~---~a~~iTPVPGGVGp~T~amLl~N~v~a 367 (375)
+. .+-+.+. .+++.-++.. +|+-|....+ ..-+++ -||-+|.-+..|=+++-+.
T Consensus 87 i~-~~a~~~~-~vn~~d~~~~-----------~~f~~pa~v~~~~l~iais--T~G~sP~la~~lr~~ie~~ 143 (157)
T PRK06719 87 VK-QAAHDFQ-WVNVVSDGTE-----------SSFHTPGVIRNDEYVVTIS--TSGKDPSFTKRLKQELTSI 143 (157)
T ss_pred HH-HHHHHCC-cEEECCCCCc-----------CcEEeeeEEEECCeEEEEE--CCCcChHHHHHHHHHHHHH
Confidence 21 1223333 3343322211 2222222111 122343 4788998887776655443
No 118
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.31 E-value=0.00047 Score=67.70 Aligned_cols=73 Identities=21% Similarity=0.304 Sum_probs=59.8
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-CCHHhhccCCcEEEEccCCCCc---c---cCCCcCCCcEEEEe
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-KNPEEITRQADIIISAVGQPNM---V---RGSWIKPGAVIIDV 313 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-~~L~~~l~~ADIVIsAvG~p~~---I---~~~~vk~gavVIDv 313 (375)
.+++|.|||.|.. |.+++..|.+.|.+|++.+|+. .++.+.+++||+||.+++.... + .+..++++.++||.
T Consensus 3 ~~m~I~iiG~G~~-G~~lA~~l~~~G~~V~~~~r~~~~~~~~~~~~advvi~~vp~~~~~~v~~~l~~~~~~~~~ivi~~ 81 (308)
T PRK14619 3 QPKTIAILGAGAW-GSTLAGLASANGHRVRVWSRRSGLSLAAVLADADVIVSAVSMKGVRPVAEQVQALNLPPETIIVTA 81 (308)
T ss_pred CCCEEEEECccHH-HHHHHHHHHHCCCEEEEEeCCCCCCHHHHHhcCCEEEEECChHHHHHHHHHHHHhcCCCCcEEEEe
Confidence 5679999999885 9999999999999999998764 5788889999999999986432 2 22236788999997
Q ss_pred e
Q 017184 314 G 314 (375)
Q Consensus 314 g 314 (375)
.
T Consensus 82 s 82 (308)
T PRK14619 82 T 82 (308)
T ss_pred C
Confidence 5
No 119
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=97.28 E-value=0.00044 Score=68.14 Aligned_cols=73 Identities=25% Similarity=0.426 Sum_probs=59.3
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC---------------CCHHhhccCCcEEEEccCCCCc-----ccCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------KNPEEITRQADIIISAVGQPNM-----VRGS 302 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t---------------~~L~~~l~~ADIVIsAvG~p~~-----I~~~ 302 (375)
.+|..||-|.. |.|+|..|.+.|.+|++.+|+. .+..+..++||+||+.++.+.- ..++
T Consensus 1 ~kIafIGLG~M-G~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~ 79 (286)
T COG2084 1 MKIAFIGLGIM-GSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGEN 79 (286)
T ss_pred CeEEEEcCchh-hHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCcc
Confidence 36899999986 9999999999999999999873 2445789999999999996542 2223
Q ss_pred ----CcCCCcEEEEeeec
Q 017184 303 ----WIKPGAVIIDVGIN 316 (375)
Q Consensus 303 ----~vk~gavVIDvgin 316 (375)
..++|.++||....
T Consensus 80 g~~~~~~~G~i~IDmSTi 97 (286)
T COG2084 80 GLLEGLKPGAIVIDMSTI 97 (286)
T ss_pred chhhcCCCCCEEEECCCC
Confidence 45789999999865
No 120
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=97.25 E-value=0.00045 Score=69.42 Aligned_cols=79 Identities=22% Similarity=0.375 Sum_probs=62.2
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC-------------CHHhhccCCcEEEEccCCC----Ccc
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------NPEEITRQADIIISAVGQP----NMV 299 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~-------------~L~~~l~~ADIVIsAvG~p----~~I 299 (375)
+.+++||+|.|+|.|.+ |+.+|..|..-|+.+.-+.|+.. ++.+.++++|+||.+.+-- +++
T Consensus 157 g~~~~gK~vgilG~G~I-G~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt~~T~~li 235 (336)
T KOG0069|consen 157 GYDLEGKTVGILGLGRI-GKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLTKETRHLI 235 (336)
T ss_pred cccccCCEEEEecCcHH-HHHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCCHHHHHHh
Confidence 56789999999999997 99999999998844444433321 6788999999999998732 356
Q ss_pred cC---CCcCCCcEEEEeeec
Q 017184 300 RG---SWIKPGAVIIDVGIN 316 (375)
Q Consensus 300 ~~---~~vk~gavVIDvgin 316 (375)
.+ ++.|+|+++|+++--
T Consensus 236 Nk~~~~~mk~g~vlVN~aRG 255 (336)
T KOG0069|consen 236 NKKFIEKMKDGAVLVNTARG 255 (336)
T ss_pred hHHHHHhcCCCeEEEecccc
Confidence 55 467999999999844
No 121
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=97.22 E-value=0.00056 Score=69.35 Aligned_cols=75 Identities=17% Similarity=0.277 Sum_probs=59.2
Q ss_pred CCCEEEEEc-CCcccHHHHHHHHhhCCCeEEEEcCCC-CCHHhhccCCcEEEEccCCCC---cccC-CCcCCCcEEEEee
Q 017184 241 KGKRAVVIG-RSNIVGMPAALLLQREDATVSIVHSRT-KNPEEITRQADIIISAVGQPN---MVRG-SWIKPGAVIIDVG 314 (375)
Q Consensus 241 ~GK~vvVIG-rs~~VGkpla~lL~~~gAtVtv~hs~t-~~L~~~l~~ADIVIsAvG~p~---~I~~-~~vk~gavVIDvg 314 (375)
..++|+||| .|. +|..++..|.+.|.+|+++++.. .+..+.+++||+||.+++... ++.. ..+++|++|+|+|
T Consensus 97 ~~~~I~IiGG~Gl-mG~slA~~l~~~G~~V~~~d~~~~~~~~~~~~~aDlVilavP~~~~~~~~~~l~~l~~~~iv~Dv~ 175 (374)
T PRK11199 97 DLRPVVIVGGKGQ-LGRLFAKMLTLSGYQVRILEQDDWDRAEDILADAGMVIVSVPIHLTEEVIARLPPLPEDCILVDLT 175 (374)
T ss_pred ccceEEEEcCCCh-hhHHHHHHHHHCCCeEEEeCCCcchhHHHHHhcCCEEEEeCcHHHHHHHHHHHhCCCCCcEEEECC
Confidence 348899999 666 59999999999999999998754 356778899999999998543 2211 1178999999998
Q ss_pred ec
Q 017184 315 IN 316 (375)
Q Consensus 315 in 316 (375)
..
T Consensus 176 Sv 177 (374)
T PRK11199 176 SV 177 (374)
T ss_pred Cc
Confidence 63
No 122
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=97.13 E-value=0.00077 Score=59.94 Aligned_cols=69 Identities=33% Similarity=0.457 Sum_probs=52.1
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC----------------------------CCCHHhhccCCcEEEEccCC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------------------TKNPEEITRQADIIISAVGQ 295 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~----------------------------t~~L~~~l~~ADIVIsAvG~ 295 (375)
||+|||+|.. |.++|..|..+|.+|++..+. |.|+++.+++||+||.+++.
T Consensus 1 KI~ViGaG~~-G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs 79 (157)
T PF01210_consen 1 KIAVIGAGNW-GTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPS 79 (157)
T ss_dssp EEEEESSSHH-HHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-G
T ss_pred CEEEECcCHH-HHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccH
Confidence 6899999996 999999999999999999654 35788999999999999986
Q ss_pred CCc---cc--CCCcCCCcEEEEe
Q 017184 296 PNM---VR--GSWIKPGAVIIDV 313 (375)
Q Consensus 296 p~~---I~--~~~vk~gavVIDv 313 (375)
-.+ ++ ..+++++..+|-+
T Consensus 80 ~~~~~~~~~l~~~l~~~~~ii~~ 102 (157)
T PF01210_consen 80 QAHREVLEQLAPYLKKGQIIISA 102 (157)
T ss_dssp GGHHHHHHHHTTTSHTT-EEEET
T ss_pred HHHHHHHHHHhhccCCCCEEEEe
Confidence 432 21 2456778777754
No 123
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=97.08 E-value=0.00081 Score=63.53 Aligned_cols=73 Identities=30% Similarity=0.429 Sum_probs=58.2
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC-----------------CHHhhccCCcEEEEccCCCCc---cc--
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------------NPEEITRQADIIISAVGQPNM---VR-- 300 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~-----------------~L~~~l~~ADIVIsAvG~p~~---I~-- 300 (375)
+++.|+|+|++ |..++..|...|.+|++-+|+.+ ..++..+.|||||.|++.... +.
T Consensus 2 ~~~~i~GtGni-G~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~~a~~~v~~~l 80 (211)
T COG2085 2 MIIAIIGTGNI-GSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPFEAIPDVLAEL 80 (211)
T ss_pred cEEEEeccChH-HHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccHHHHHhHHHHH
Confidence 57899999996 99999999999999999977743 345788999999999996553 21
Q ss_pred CCCcCCCcEEEEeeecCC
Q 017184 301 GSWIKPGAVIIDVGINPV 318 (375)
Q Consensus 301 ~~~vk~gavVIDvgin~~ 318 (375)
.+++. |.+|||+. ||.
T Consensus 81 ~~~~~-~KIvID~t-np~ 96 (211)
T COG2085 81 RDALG-GKIVIDAT-NPI 96 (211)
T ss_pred HHHhC-CeEEEecC-CCc
Confidence 24455 89999986 553
No 124
>PLN02712 arogenate dehydrogenase
Probab=97.04 E-value=0.0012 Score=72.01 Aligned_cols=80 Identities=14% Similarity=0.178 Sum_probs=61.0
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC-------------CHHhhcc-CCcEEEEccCCCC---c
Q 017184 236 YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------NPEEITR-QADIIISAVGQPN---M 298 (375)
Q Consensus 236 ~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~-------------~L~~~l~-~ADIVIsAvG~p~---~ 298 (375)
.+.++++++|.|||.|.+ |..++..|.+.|.+|+++++... ++.+.+. .+|+||.+++... +
T Consensus 363 ~~~~~~~~kIgIIGlG~m-G~slA~~L~~~G~~V~~~dr~~~~~~a~~~Gv~~~~~~~el~~~~aDvVILavP~~~~~~v 441 (667)
T PLN02712 363 CVNDGSKLKIAIVGFGNF-GQFLAKTMVKQGHTVLAYSRSDYSDEAQKLGVSYFSDADDLCEEHPEVILLCTSILSTEKV 441 (667)
T ss_pred ccCCCCCCEEEEEecCHH-HHHHHHHHHHCcCEEEEEECChHHHHHHHcCCeEeCCHHHHHhcCCCEEEECCChHHHHHH
Confidence 455778999999999886 99999999999999998887632 3444454 5899999998432 2
Q ss_pred cc---CCCcCCCcEEEEeeec
Q 017184 299 VR---GSWIKPGAVIIDVGIN 316 (375)
Q Consensus 299 I~---~~~vk~gavVIDvgin 316 (375)
+. ...+++|++|+|++..
T Consensus 442 i~~l~~~~lk~g~ivvDv~Sv 462 (667)
T PLN02712 442 LKSLPFQRLKRSTLFVDVLSV 462 (667)
T ss_pred HHHHHHhcCCCCcEEEECCCc
Confidence 22 2357899999999743
No 125
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=97.03 E-value=0.0015 Score=65.15 Aligned_cols=75 Identities=20% Similarity=0.380 Sum_probs=57.8
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhh--CCCeEEEEcCCC--------------------CCHHhhccCCcEEEEccCCCC-
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQR--EDATVSIVHSRT--------------------KNPEEITRQADIIISAVGQPN- 297 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~--~gAtVtv~hs~t--------------------~~L~~~l~~ADIVIsAvG~p~- 297 (375)
.-+++.|||.|.. |+..+..|.. ...+|.+++++. .+.++.+++|||||++++...
T Consensus 127 ~~~~lgiiG~G~q-A~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~eav~~aDiVitaT~s~~P 205 (325)
T TIGR02371 127 DSSVLGIIGAGRQ-AWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPREAVEGCDILVTTTPSRKP 205 (325)
T ss_pred CCCEEEEECCCHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHHHhccCCEEEEecCCCCc
Confidence 4588999999886 8875544433 335788887652 356788999999999998765
Q ss_pred cccCCCcCCCcEEEEeeec
Q 017184 298 MVRGSWIKPGAVIIDVGIN 316 (375)
Q Consensus 298 ~I~~~~vk~gavVIDvgin 316 (375)
++..+|+|||+.|.-+|.+
T Consensus 206 ~~~~~~l~~g~~v~~vGs~ 224 (325)
T TIGR02371 206 VVKADWVSEGTHINAIGAD 224 (325)
T ss_pred EecHHHcCCCCEEEecCCC
Confidence 4789999999999999954
No 126
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=96.97 E-value=0.0014 Score=63.56 Aligned_cols=71 Identities=21% Similarity=0.383 Sum_probs=56.0
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------CCHHhhccCCcEEEEccCCCC----cc-cC---
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN----MV-RG--- 301 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------~~L~~~l~~ADIVIsAvG~p~----~I-~~--- 301 (375)
+|.|||.|.+ |.+++..|++.|.+|++++++. .+..+.++++|+||.+++... .+ ..
T Consensus 1 ~IgvIG~G~m-G~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDivi~~vp~~~~~~~v~~~~~~~ 79 (291)
T TIGR01505 1 KVGFIGLGIM-GSPMSINLAKAGYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPDSPQVEEVAFGENGI 79 (291)
T ss_pred CEEEEEecHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcchH
Confidence 4789999886 9999999999999999998762 356678899999999998542 11 11
Q ss_pred -CCcCCCcEEEEeee
Q 017184 302 -SWIKPGAVIIDVGI 315 (375)
Q Consensus 302 -~~vk~gavVIDvgi 315 (375)
..+++|.++||.+.
T Consensus 80 ~~~~~~g~iivd~st 94 (291)
T TIGR01505 80 IEGAKPGKTLVDMSS 94 (291)
T ss_pred hhcCCCCCEEEECCC
Confidence 24578999999764
No 127
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=96.96 E-value=0.0018 Score=62.78 Aligned_cols=74 Identities=20% Similarity=0.324 Sum_probs=57.9
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------CCHHhhccCCcEEEEccCCCC----cc-c---
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN----MV-R--- 300 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------~~L~~~l~~ADIVIsAvG~p~----~I-~--- 300 (375)
++|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||.+++.+. .+ .
T Consensus 3 ~~IgviG~G~m-G~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~~~~~~e~~~~~d~vi~~vp~~~~~~~v~~~~~~ 81 (296)
T PRK11559 3 MKVGFIGLGIM-GKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAETASTAKAVAEQCDVIITMLPNSPHVKEVALGENG 81 (296)
T ss_pred ceEEEEccCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHcCcch
Confidence 57999999886 9999999999999999988752 356677899999999998433 12 1
Q ss_pred -CCCcCCCcEEEEeeecC
Q 017184 301 -GSWIKPGAVIIDVGINP 317 (375)
Q Consensus 301 -~~~vk~gavVIDvgin~ 317 (375)
...+++|.++||++...
T Consensus 82 ~~~~~~~g~iiid~st~~ 99 (296)
T PRK11559 82 IIEGAKPGTVVIDMSSIA 99 (296)
T ss_pred HhhcCCCCcEEEECCCCC
Confidence 12468899999997543
No 128
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.96 E-value=0.00049 Score=55.40 Aligned_cols=70 Identities=27% Similarity=0.396 Sum_probs=52.3
Q ss_pred EEEEEcCCcccHHHHHHHHhhCC---CeEEEE-cCCC---------------C-CHHhhccCCcEEEEccCCCCc--ccC
Q 017184 244 RAVVIGRSNIVGMPAALLLQRED---ATVSIV-HSRT---------------K-NPEEITRQADIIISAVGQPNM--VRG 301 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~g---AtVtv~-hs~t---------------~-~L~~~l~~ADIVIsAvG~p~~--I~~ 301 (375)
|+.+||.|++ |..++..|.+.| .+|+++ +++. . +..+.+++||+||.++.-..+ +-.
T Consensus 1 kI~iIG~G~m-g~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~advvilav~p~~~~~v~~ 79 (96)
T PF03807_consen 1 KIGIIGAGNM-GSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEAAQEADVVILAVKPQQLPEVLS 79 (96)
T ss_dssp EEEEESTSHH-HHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHHHHHTSEEEE-S-GGGHHHHHH
T ss_pred CEEEECCCHH-HHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCChHHhhccCCEEEEEECHHHHHHHHH
Confidence 5889999996 999999999999 899965 6652 2 567788899999999986543 211
Q ss_pred --CCcCCCcEEEEee
Q 017184 302 --SWIKPGAVIIDVG 314 (375)
Q Consensus 302 --~~vk~gavVIDvg 314 (375)
....++.++||+.
T Consensus 80 ~i~~~~~~~~vis~~ 94 (96)
T PF03807_consen 80 EIPHLLKGKLVISIA 94 (96)
T ss_dssp HHHHHHTTSEEEEES
T ss_pred HHhhccCCCEEEEeC
Confidence 3466788999874
No 129
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=96.96 E-value=0.0014 Score=65.79 Aligned_cols=77 Identities=19% Similarity=0.292 Sum_probs=59.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-------------CCHHhhccCCcEEEEccCCCC---cccC-
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVGQPN---MVRG- 301 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-------------~~L~~~l~~ADIVIsAvG~p~---~I~~- 301 (375)
.|+||+|.|||.|.+ |+++|..|...|.+|++.++.. .++.+.+++||+|+..++.+. ++..
T Consensus 13 ~LkgKtVGIIG~GsI-G~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLPd~~t~~V~~~e 91 (335)
T PRK13403 13 LLQGKTVAVIGYGSQ-GHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLPDEQQAHVYKAE 91 (335)
T ss_pred hhCcCEEEEEeEcHH-HHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCCChHHHHHHHHH
Confidence 468999999999986 9999999999999999986542 157889999999999988533 3432
Q ss_pred --CCcCCCcEE-EEeeec
Q 017184 302 --SWIKPGAVI-IDVGIN 316 (375)
Q Consensus 302 --~~vk~gavV-IDvgin 316 (375)
..+++|+++ +-=|+|
T Consensus 92 il~~MK~GaiL~f~hgfn 109 (335)
T PRK13403 92 VEENLREGQMLLFSHGFN 109 (335)
T ss_pred HHhcCCCCCEEEECCCcc
Confidence 456888754 333444
No 130
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.94 E-value=0.0016 Score=60.93 Aligned_cols=59 Identities=19% Similarity=0.395 Sum_probs=48.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC-CH-----------------HhhccCCcEEEEccCCCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-NP-----------------EEITRQADIIISAVGQPN 297 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~-~L-----------------~~~l~~ADIVIsAvG~p~ 297 (375)
++++||+|+|||.|.+ |..-+..|++.||.|||+..... ++ .+.+..+|+||.|+|.+.
T Consensus 5 l~l~gk~vlVvGgG~v-a~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at~d~~ 81 (205)
T TIGR01470 5 ANLEGRAVLVVGGGDV-ALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDADILEGAFLVIAATDDEE 81 (205)
T ss_pred EEcCCCeEEEECcCHH-HHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECCCCHH
Confidence 5789999999999985 99999999999999999965421 11 234778999999999864
No 131
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.94 E-value=0.003 Score=65.39 Aligned_cols=129 Identities=24% Similarity=0.272 Sum_probs=76.6
Q ss_pred HHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC----CHHhhccCCcEEEEccCC-CCcccCCCcCCC
Q 017184 233 LHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----NPEEITRQADIIISAVGQ-PNMVRGSWIKPG 307 (375)
Q Consensus 233 L~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~----~L~~~l~~ADIVIsAvG~-p~~I~~~~vk~g 307 (375)
|.+.+.+++||+|+|||.|.+ |..+|..|.++|++|+++++... .+.+.+++..|-+-. |. +. .....+
T Consensus 7 ~~~~~~~~~~~~v~viG~G~~-G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~-~~~~~----~~~~~D 80 (480)
T PRK01438 7 LTSWHSDWQGLRVVVAGLGVS-GFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRL-GPGPT----LPEDTD 80 (480)
T ss_pred hhhcccCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEE-CCCcc----ccCCCC
Confidence 456677889999999999996 99999999999999999986542 122334333332211 11 10 112234
Q ss_pred cEEEEeeecCCCCC---CCCCCceeecccchh-hhhh---hcceeccCCCCccHHHHHHHHHHHHHHH
Q 017184 308 AVIIDVGINPVEDA---KSPRGYRLVGDVCYE-EACE---VASAITPVPGGVGPMTIAMLLSNTLTSA 368 (375)
Q Consensus 308 avVIDvgin~~~~~---~~~~g~kl~GDVd~~-~v~~---~a~~iTPVPGGVGp~T~amLl~N~v~a~ 368 (375)
.+|+-.|+.+...- -...|-.+.++.++- ...+ +.-.| -|-|=.|.-|+.-|+.++++..
T Consensus 81 ~Vv~s~Gi~~~~~~~~~a~~~gi~v~~~~e~~~~~~~~~~~~~~I-~VTGTnGKTTTt~mi~~iL~~~ 147 (480)
T PRK01438 81 LVVTSPGWRPDAPLLAAAADAGIPVWGEVELAWRLRDPDRPAPWL-AVTGTNGKTTTVQMLASMLRAA 147 (480)
T ss_pred EEEECCCcCCCCHHHHHHHHCCCeecchHHHHHHhhhccCCCCEE-EEeCCCcHHHHHHHHHHHHHHc
Confidence 45555555543110 011233566766641 1111 11112 2558889999999999998764
No 132
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.91 E-value=0.0018 Score=66.34 Aligned_cols=111 Identities=22% Similarity=0.262 Sum_probs=77.5
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCC-CeEEEEcCCC------------------------CCHHhhccCCcEEEEccCCCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRT------------------------KNPEEITRQADIIISAVGQPN 297 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~g-AtVtv~hs~t------------------------~~L~~~l~~ADIVIsAvG~p~ 297 (375)
++|+|||+|++ |+++|+.|++++ .+|++..|+- +.+.+.+++.|+||++.+...
T Consensus 2 ~~ilviGaG~V-g~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~ 80 (389)
T COG1748 2 MKILVIGAGGV-GSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFV 80 (389)
T ss_pred CcEEEECCchh-HHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchh
Confidence 68999999885 999999999998 7999988761 245688999999999998754
Q ss_pred c--ccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCC-CccHHHHHHHHHHHHHH
Q 017184 298 M--VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPG-GVGPMTIAMLLSNTLTS 367 (375)
Q Consensus 298 ~--I~~~~vk~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPG-GVGp~T~amLl~N~v~a 367 (375)
- +-+..++-|.-++|+.+.... . -++++.+++|+ +|-++| |+-|=-+..+...+++-
T Consensus 81 ~~~i~ka~i~~gv~yvDts~~~~~---------~---~~~~~~a~~Ag-it~v~~~G~dPGi~nv~a~~a~~~ 140 (389)
T COG1748 81 DLTILKACIKTGVDYVDTSYYEEP---------P---WKLDEEAKKAG-ITAVLGCGFDPGITNVLAAYAAKE 140 (389)
T ss_pred hHHHHHHHHHhCCCEEEcccCCch---------h---hhhhHHHHHcC-eEEEcccCcCcchHHHHHHHHHHH
Confidence 3 334567888899999876532 1 12334466677 233432 55555555565555543
No 133
>PLN02256 arogenate dehydrogenase
Probab=96.90 E-value=0.0023 Score=63.33 Aligned_cols=76 Identities=16% Similarity=0.280 Sum_probs=57.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-------------CCHHhhc-cCCcEEEEccCCCC---ccc-
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEIT-RQADIIISAVGQPN---MVR- 300 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-------------~~L~~~l-~~ADIVIsAvG~p~---~I~- 300 (375)
+-+++++.|||.|.+ |..++..|.+.|.+|+++++.. .++.+.+ .++|+||.+++... ++.
T Consensus 33 ~~~~~kI~IIG~G~m-G~slA~~L~~~G~~V~~~d~~~~~~~a~~~gv~~~~~~~e~~~~~aDvVilavp~~~~~~vl~~ 111 (304)
T PLN02256 33 KSRKLKIGIVGFGNF-GQFLAKTFVKQGHTVLATSRSDYSDIAAELGVSFFRDPDDFCEEHPDVVLLCTSILSTEAVLRS 111 (304)
T ss_pred cCCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEEECccHHHHHHHcCCeeeCCHHHHhhCCCCEEEEecCHHHHHHHHHh
Confidence 447889999999886 9999999999898898887653 2344444 46999999998432 232
Q ss_pred --CCCcCCCcEEEEeee
Q 017184 301 --GSWIKPGAVIIDVGI 315 (375)
Q Consensus 301 --~~~vk~gavVIDvgi 315 (375)
...++++++|+|++.
T Consensus 112 l~~~~l~~~~iviDv~S 128 (304)
T PLN02256 112 LPLQRLKRSTLFVDVLS 128 (304)
T ss_pred hhhhccCCCCEEEecCC
Confidence 234688999999996
No 134
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=96.89 E-value=0.0017 Score=63.54 Aligned_cols=74 Identities=18% Similarity=0.330 Sum_probs=58.4
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------CCHHhhccCCcEEEEccCCCC----cccC---
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN----MVRG--- 301 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------~~L~~~l~~ADIVIsAvG~p~----~I~~--- 301 (375)
++|.|||.|.+ |.+++..|++.|.+|++++++. .+..+..+++|+||.+++... .+..
T Consensus 2 ~~Ig~IGlG~m-G~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~~~aDvVi~~vp~~~~~~~vl~~~~~ 80 (296)
T PRK15461 2 AAIAFIGLGQM-GSPMASNLLKQGHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNGDLVRSVLFGENG 80 (296)
T ss_pred CeEEEEeeCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCccc
Confidence 47999999986 9999999999999999998752 355677899999999998653 1221
Q ss_pred --CCcCCCcEEEEeeecC
Q 017184 302 --SWIKPGAVIIDVGINP 317 (375)
Q Consensus 302 --~~vk~gavVIDvgin~ 317 (375)
..+++|.++||.+...
T Consensus 81 i~~~l~~g~lvid~sT~~ 98 (296)
T PRK15461 81 VCEGLSRDALVIDMSTIH 98 (296)
T ss_pred HhhcCCCCCEEEECCCCC
Confidence 1357899999998654
No 135
>PRK13814 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=96.82 E-value=0.18 Score=50.41 Aligned_cols=147 Identities=12% Similarity=0.056 Sum_probs=94.8
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCCC----HHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017184 128 SATYVRNKKKACQSVGINSFEVHLPEDTS----EQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 203 (375)
Q Consensus 128 S~~Yv~~k~k~a~~~GI~~~~~~l~~~vs----~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDG 203 (375)
|..---+=..++.++|-.+.++ ....+ .|-+.+.++-|+.- .+++|.+-.| .|-..+.+.+.+ ..
T Consensus 56 STRTR~SFe~A~~~LGg~~~~~--~~~~s~~~kgEsl~Dtarvls~y-~~D~iv~R~~--~~~~~~~~a~~~------~~ 124 (310)
T PRK13814 56 STRTRNSFEIAAKRLGAMVLNP--NLKISAISKGETLFDTIKTLEAM-GVYFFIVRHS--ENETPEQIAKQL------SS 124 (310)
T ss_pred cchhHHHHHHHHHHhCCeEEEC--CCccccCCCCCCHHHHHHHHHHh-CCCEEEEeCC--chhHHHHHHHhC------CC
Confidence 3333335567888999987664 32211 24566666666552 3468887755 322222232222 12
Q ss_pred cccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCC--cccHHHHHHHHhhCCC-eEEEEcCC-----
Q 017184 204 FHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRS--NIVGMPAALLLQREDA-TVSIVHSR----- 275 (375)
Q Consensus 204 l~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs--~~VGkpla~lL~~~gA-tVtv~hs~----- 275 (375)
+-.+|.| ..+.+.||=+.+=+--++++..+++|++++++|-+ +-|.+.++.++...|. +|++|+-.
T Consensus 125 vPvINag------~g~~~HPtQaLaDl~Ti~e~~g~l~g~~va~vGD~~~~rv~~Sl~~~~a~~g~~~v~~~~P~~~~p~ 198 (310)
T PRK13814 125 GVVINAG------DGNHQHPSQALIDLMTIKQHKPHWNKLCVTIIGDIRHSRVANSLMDGLVTMGVPEIRLVGPSSLLPD 198 (310)
T ss_pred CCeEECC------cCCCCCchHHHHHHHHHHHHhCCcCCcEEEEECCCCCCcHHHHHHHHHHHcCCCEEEEeCCcccCcC
Confidence 3455643 23457799888754444444447999999999985 4569999999999998 89998632
Q ss_pred ---------CCCHHhhccCCcEEEE
Q 017184 276 ---------TKNPEEITRQADIIIS 291 (375)
Q Consensus 276 ---------t~~L~~~l~~ADIVIs 291 (375)
+.|+++.++.||+|.+
T Consensus 199 ~~~~~~~~~~~d~~ea~~~aDvvy~ 223 (310)
T PRK13814 199 KVGNDSIKKFTELKPSLLNSDVIVT 223 (310)
T ss_pred ccccceEEEEcCHHHHhCCCCEEEE
Confidence 2577899999999986
No 136
>PLN02342 ornithine carbamoyltransferase
Probab=96.75 E-value=0.12 Score=52.38 Aligned_cols=188 Identities=13% Similarity=0.113 Sum_probs=118.0
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhcc--C------CCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCC--
Q 017184 85 KVIDGKAVAKQIRDEITGEVSRMKDAI--G------VVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPED-- 154 (375)
Q Consensus 85 ~ildGk~la~~i~~~lk~~v~~l~~~~--g------~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~-- 154 (375)
.+|+-..+.++=.+.|-+...++|+.. + .+-+....++-+ .|..---.=..++.++|.++.++.-...
T Consensus 47 ~~lsi~dls~~ei~~ll~~A~~lk~~~~~~~~~~~~L~gk~va~lF~e--pSTRTR~SFE~A~~~LGg~~i~l~~~~ss~ 124 (348)
T PLN02342 47 HFLHIDDFDKEEILGLLDRAKEVKALLKSGDRSFQPFKGKSMAMIFTK--PSMRTRVSFETGFFLLGGHALYLGPDDIQL 124 (348)
T ss_pred CccchhhCCHHHHHHHHHHHHHHHhhhhcCccccccCCCCEEEEEecC--CCcchHHHHHHHHHHcCCcEEEeCcccccC
Confidence 466666666544445555555554321 1 112233333332 3433334567789999999987642210
Q ss_pred CCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHH-HHHH
Q 017184 155 TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGC-IELL 233 (375)
Q Consensus 155 vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gv-i~lL 233 (375)
...|.+.+.++-|..- +|+|.+-.|-. ..++.+...- .+-.+|.| .+.+.||=+.+= +.+.
T Consensus 125 ~kGESl~DTarvLs~y--~D~IviR~~~~------~~~~~la~~~---~vPVINA~-------~~~~HPtQaLaDl~Ti~ 186 (348)
T PLN02342 125 GKREETRDIARVLSRY--NDIIMARVFAH------QDVLDLAEYS---SVPVINGL-------TDYNHPCQIMADALTII 186 (348)
T ss_pred CCCcCHHHHHHHHHHh--CCEEEEeCCCh------HHHHHHHHhC---CCCEEECC-------CCCCChHHHHHHHHHHH
Confidence 1235677777777664 78999886632 2223332211 23445642 234679987774 4444
Q ss_pred HHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC----------------------CCCHHhhccCCcEEEE
Q 017184 234 HRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------------TKNPEEITRQADIIIS 291 (375)
Q Consensus 234 ~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~----------------------t~~L~~~l~~ADIVIs 291 (375)
++.| +++|++|++||-.+-|.+.++.++...|++|++|+-. +.|+++.++.||+|.+
T Consensus 187 e~~G-~l~glkva~vGD~~nva~Sli~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~~d~~eav~~aDVvy~ 265 (348)
T PLN02342 187 EHIG-RLEGTKVVYVGDGNNIVHSWLLLAAVLPFHFVCACPKGYEPDAKTVEKARAAGISKIEITNDPAEAVKGADVVYT 265 (348)
T ss_pred HHhC-CcCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHHHhCCCcEEEEcCHHHHhCCCCEEEE
Confidence 5555 7999999999998888999999999999999998522 2567889999999997
Q ss_pred cc
Q 017184 292 AV 293 (375)
Q Consensus 292 Av 293 (375)
-.
T Consensus 266 ~~ 267 (348)
T PLN02342 266 DV 267 (348)
T ss_pred CC
Confidence 63
No 137
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=96.75 E-value=0.003 Score=62.06 Aligned_cols=74 Identities=24% Similarity=0.350 Sum_probs=57.6
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC------------------CCH-HhhccCCcEEEEccCCCC---cc
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------------KNP-EEITRQADIIISAVGQPN---MV 299 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t------------------~~L-~~~l~~ADIVIsAvG~p~---~I 299 (375)
-++|+|+|.|.+ |+.++..|..+|..|.++.+.. .+. .+....||+||.+++... ++
T Consensus 3 ~~~v~IvG~Gli-G~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~~~~~aD~VivavPi~~~~~~l 81 (279)
T COG0287 3 SMKVGIVGLGLM-GGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIVAVPIEATEEVL 81 (279)
T ss_pred CcEEEEECCchH-HHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccchhhhhcccCCEEEEeccHHHHHHHH
Confidence 468999999886 9999999999999888886542 122 566788999999999643 22
Q ss_pred cC--CCcCCCcEEEEeeec
Q 017184 300 RG--SWIKPGAVIIDVGIN 316 (375)
Q Consensus 300 ~~--~~vk~gavVIDvgin 316 (375)
.. ..+++|++|.|+|..
T Consensus 82 ~~l~~~l~~g~iv~Dv~S~ 100 (279)
T COG0287 82 KELAPHLKKGAIVTDVGSV 100 (279)
T ss_pred HHhcccCCCCCEEEecccc
Confidence 21 278999999999964
No 138
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.72 E-value=0.0027 Score=62.10 Aligned_cols=73 Identities=26% Similarity=0.354 Sum_probs=56.6
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCC--eEEEEcCCC----------------CCHHhhccCCcEEEEccCCCCc---cc
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT----------------KNPEEITRQADIIISAVGQPNM---VR 300 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gA--tVtv~hs~t----------------~~L~~~l~~ADIVIsAvG~p~~---I~ 300 (375)
.++|.|||.|.+ |..++..|.+.|. .|++++++. .++.+.++++|+||.+++.... +.
T Consensus 6 ~~~I~IIG~G~m-G~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvViiavp~~~~~~v~~ 84 (307)
T PRK07502 6 FDRVALIGIGLI-GSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTTSAAEAVKGADLVILCVPVGASGAVAA 84 (307)
T ss_pred CcEEEEEeeCHH-HHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecCCHHHHhcCCCEEEECCCHHHHHHHHH
Confidence 368999999885 9999999998884 788887652 2456678899999999986431 21
Q ss_pred --CCCcCCCcEEEEeee
Q 017184 301 --GSWIKPGAVIIDVGI 315 (375)
Q Consensus 301 --~~~vk~gavVIDvgi 315 (375)
..+++++.+|+|+|.
T Consensus 85 ~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 85 EIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHhhCCCCCEEEeCcc
Confidence 246789999999985
No 139
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=96.59 E-value=0.0038 Score=61.43 Aligned_cols=92 Identities=18% Similarity=0.334 Sum_probs=74.9
Q ss_pred CHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhC----CC-------eEEEEcCC------------------
Q 017184 225 TPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRE----DA-------TVSIVHSR------------------ 275 (375)
Q Consensus 225 T~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~----gA-------tVtv~hs~------------------ 275 (375)
+-.|++..++-.+.+++.-+++++|+|.. |..++.+|... |. .+++++++
T Consensus 8 ~lAgllnAlk~~g~~l~d~~iv~~GAGsA-g~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a 86 (279)
T cd05312 8 ALAGLLAALRITGKPLSDQRILFLGAGSA-GIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFA 86 (279)
T ss_pred HHHHHHHHHHHhCCChhhcEEEEECcCHH-HHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHH
Confidence 45688999999999999999999999987 99999888775 76 68888765
Q ss_pred --C-----CCHHhhcc--CCcEEEEccCCCCcccCCCcC------CCcEEEEeeecCC
Q 017184 276 --T-----KNPEEITR--QADIIISAVGQPNMVRGSWIK------PGAVIIDVGINPV 318 (375)
Q Consensus 276 --t-----~~L~~~l~--~ADIVIsAvG~p~~I~~~~vk------~gavVIDvgin~~ 318 (375)
+ .+|.+.++ ++|++|-..+.++.+++++|+ +.-+|+=+. ||.
T Consensus 87 ~~~~~~~~~~L~e~i~~v~ptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NPt 143 (279)
T cd05312 87 RKDEEKEGKSLLEVVKAVKPTVLIGLSGVGGAFTEEVVRAMAKSNERPIIFALS-NPT 143 (279)
T ss_pred hhcCcccCCCHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECC-CcC
Confidence 1 25788888 899999999888999998885 356777666 543
No 140
>PRK06545 prephenate dehydrogenase; Validated
Probab=96.59 E-value=0.0035 Score=63.06 Aligned_cols=73 Identities=25% Similarity=0.392 Sum_probs=55.7
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC------------------CCHHhhccCCcEEEEccCCCC---cc--
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------------KNPEEITRQADIIISAVGQPN---MV-- 299 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t------------------~~L~~~l~~ADIVIsAvG~p~---~I-- 299 (375)
++|.|||.|.+ |..++..|.+.|..|.+..+.. .++.+.+++||+||.+++... ++
T Consensus 1 ~~I~iIG~Gli-G~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~aDlVilavP~~~~~~vl~~ 79 (359)
T PRK06545 1 RTVLIVGLGLI-GGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVIDELAADLQRAAAEADLIVLAVPVDATAALLAE 79 (359)
T ss_pred CeEEEEEeCHH-HHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCCcccccCHHHHhcCCCEEEEeCCHHHHHHHHHH
Confidence 47999999986 9999999999998777775431 234566789999999998543 22
Q ss_pred -cCCCcCCCcEEEEeeec
Q 017184 300 -RGSWIKPGAVIIDVGIN 316 (375)
Q Consensus 300 -~~~~vk~gavVIDvgin 316 (375)
.+..++++++|.|+|.-
T Consensus 80 l~~~~l~~~~ivtDv~Sv 97 (359)
T PRK06545 80 LADLELKPGVIVTDVGSV 97 (359)
T ss_pred HhhcCCCCCcEEEeCccc
Confidence 22247889999999854
No 141
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=96.58 E-value=0.0062 Score=60.39 Aligned_cols=74 Identities=26% Similarity=0.359 Sum_probs=43.7
Q ss_pred CCEEEEEcCCcccHHHHHHHHhh-CC-CeEEEEcCCC--------------------CCHHhhccCCcEEEEccCCCC--
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSRT--------------------KNPEEITRQADIIISAVGQPN-- 297 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~-~g-AtVtv~hs~t--------------------~~L~~~l~~ADIVIsAvG~p~-- 297 (375)
-+++.|||.|.- ++.-+..|.. ++ -+|.+.+++. .+.++.+++|||||++|+...
T Consensus 128 ~~~l~viGaG~Q-A~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~~~~~~~av~~aDii~taT~s~~~~ 206 (313)
T PF02423_consen 128 ARTLGVIGAGVQ-ARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVAVDSAEEAVRGADIIVTATPSTTPA 206 (313)
T ss_dssp --EEEEE--SHH-HHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEEESSHHHHHTTSSEEEE----SSEE
T ss_pred CceEEEECCCHH-HHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccceeccchhhhcccCCEEEEccCCCCCC
Confidence 357777777764 6655555443 33 3567666541 367899999999999999766
Q ss_pred -cccCCCcCCCcEEEEeeec
Q 017184 298 -MVRGSWIKPGAVIIDVGIN 316 (375)
Q Consensus 298 -~I~~~~vk~gavVIDvgin 316 (375)
+++.+|+++|+.|+-+|.+
T Consensus 207 P~~~~~~l~~g~hi~~iGs~ 226 (313)
T PF02423_consen 207 PVFDAEWLKPGTHINAIGSY 226 (313)
T ss_dssp ESB-GGGS-TT-EEEE-S-S
T ss_pred ccccHHHcCCCcEEEEecCC
Confidence 5899999999999999975
No 142
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=96.57 E-value=0.21 Score=50.34 Aligned_cols=157 Identities=15% Similarity=0.102 Sum_probs=103.0
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCC---CCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHH
Q 017184 116 GLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPED---TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSIL 192 (375)
Q Consensus 116 ~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~---vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~ 192 (375)
+....++-+ .|..---+=..++.++|.++.+..- .+ ...|.+.+.++-|..- +|+|.+--|-. ..+
T Consensus 47 k~v~~lF~e--pSTRTR~SFe~A~~~LGg~~i~l~~-~~ss~~kgEsl~Dt~rvls~y--~D~iviR~~~~------~~~ 115 (331)
T PRK02102 47 KNIALIFEK--TSTRTRCAFEVAAIDLGAHVTYLGP-NDSQLGKKESIEDTARVLGRM--YDGIEYRGFKQ------EIV 115 (331)
T ss_pred CEEEEEeCC--CChhHHHHHHHHHHHcCCCEEEcCc-ccccCCCCcCHHHHHHHHhhc--CCEEEEECCch------HHH
Confidence 444444443 3444444557789999999875532 11 1235677788877764 88999986532 233
Q ss_pred hhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCC-cccHHHHHHHHhhCCCeEEE
Q 017184 193 NAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRS-NIVGMPAALLLQREDATVSI 271 (375)
Q Consensus 193 ~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs-~~VGkpla~lL~~~gAtVtv 271 (375)
+.+...-+ +-.+|.| .+...||=+.+=+--++++...++|+++++||-+ ..|.+.++.++...|++|++
T Consensus 116 ~~~a~~~~---vPVINa~-------~~~~HPtQaLaDl~Ti~e~~g~l~g~~va~vGd~~~~v~~Sl~~~~~~~g~~v~~ 185 (331)
T PRK02102 116 EELAKYSG---VPVWNGL-------TDEWHPTQMLADFMTMKEHFGPLKGLKLAYVGDGRNNMANSLMVGGAKLGMDVRI 185 (331)
T ss_pred HHHHHhCC---CCEEECC-------CCCCChHHHHHHHHHHHHHhCCCCCCEEEEECCCcccHHHHHHHHHHHcCCEEEE
Confidence 33322222 2345542 2346699888754444444457999999999996 34799999999999999999
Q ss_pred EcCC-------------------------CCCHHhhccCCcEEEEcc
Q 017184 272 VHSR-------------------------TKNPEEITRQADIIISAV 293 (375)
Q Consensus 272 ~hs~-------------------------t~~L~~~l~~ADIVIsAv 293 (375)
++-. +.|+++.++.||+|.+-+
T Consensus 186 ~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~~ 232 (331)
T PRK02102 186 CAPKELWPEEELVALAREIAKETGAKITITEDPEEAVKGADVIYTDV 232 (331)
T ss_pred ECCcccccCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcC
Confidence 8632 246678899999999753
No 143
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=96.56 E-value=0.002 Score=62.33 Aligned_cols=72 Identities=24% Similarity=0.261 Sum_probs=54.6
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCC---------------HHhhccCCcEEEEccCCCCc---cc--CCC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------PEEITRQADIIISAVGQPNM---VR--GSW 303 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~---------------L~~~l~~ADIVIsAvG~p~~---I~--~~~ 303 (375)
+|.|||.|.+ |..++..|.+.|.+|++++++... ..+.+++||+||.+++.... +. ...
T Consensus 2 ~I~IIG~G~m-G~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~aDlVilavp~~~~~~~~~~l~~~ 80 (279)
T PRK07417 2 KIGIVGLGLI-GGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVILALPIGLLLPPSEQLIPA 80 (279)
T ss_pred eEEEEeecHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccccCCHhHhcCCCEEEEcCCHHHHHHHHHHHHHh
Confidence 6899999885 999999999999999999875311 12457899999999984332 21 134
Q ss_pred cCCCcEEEEeeec
Q 017184 304 IKPGAVIIDVGIN 316 (375)
Q Consensus 304 vk~gavVIDvgin 316 (375)
++++.+|.|++.-
T Consensus 81 l~~~~ii~d~~Sv 93 (279)
T PRK07417 81 LPPEAIVTDVGSV 93 (279)
T ss_pred CCCCcEEEeCcch
Confidence 6889999999843
No 144
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=96.56 E-value=0.0059 Score=60.38 Aligned_cols=76 Identities=14% Similarity=0.099 Sum_probs=58.8
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhh-CC-CeEEEEcCCC---------------------CCHHhhccCCcEEEEccCCCC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSRT---------------------KNPEEITRQADIIISAVGQPN 297 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~-~g-AtVtv~hs~t---------------------~~L~~~l~~ADIVIsAvG~p~ 297 (375)
.-+++.|||.|.- |+.-+..+.. ++ -+|.+.+++. .+.++.+++||||+++|+...
T Consensus 116 da~~l~iiGaG~Q-A~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~ 194 (301)
T PRK06407 116 NVENFTIIGSGFQ-AETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDT 194 (301)
T ss_pred CCcEEEEECCcHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCC
Confidence 4688999999886 8866666554 23 3688776551 356788999999999999766
Q ss_pred c-ccCCCcCCCcEEEEeeecC
Q 017184 298 M-VRGSWIKPGAVIIDVGINP 317 (375)
Q Consensus 298 ~-I~~~~vk~gavVIDvgin~ 317 (375)
. ++.+|++||+.|.=+|.+.
T Consensus 195 P~~~~~~l~pg~hV~aiGs~~ 215 (301)
T PRK06407 195 PIFNRKYLGDEYHVNLAGSNY 215 (301)
T ss_pred cEecHHHcCCCceEEecCCCC
Confidence 4 7999999999999999653
No 145
>PRK14804 ornithine carbamoyltransferase; Provisional
Probab=96.55 E-value=0.34 Score=48.33 Aligned_cols=148 Identities=14% Similarity=0.103 Sum_probs=98.4
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCC-CCCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccc
Q 017184 127 DSATYVRNKKKACQSVGINSFEVHLPE-DTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 205 (375)
Q Consensus 127 aS~~Yv~~k~k~a~~~GI~~~~~~l~~-~vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~ 205 (375)
.|..---+=..++.++|-++.++.-.+ +...+.+.+.++-|+. -+|+|.+-.|- +-.... +.... .+-
T Consensus 53 pSTRTR~SFe~A~~~LGg~~i~l~~~~~~~~~~~~~dt~~vls~--~~D~iv~R~~~--~~~~~~----~a~~~---~vP 121 (311)
T PRK14804 53 TSTRTRVSFEVAMTEMGGHGIYLDWMASNFQLSDIDLEARYLSR--NVSVIMARLKK--HEDLLV----MKNGS---QVP 121 (311)
T ss_pred CchhHHHHHHHHHHHcCCeEEEeCCCccccccccHHHHHHHHHh--cCCEEEEeCCC--hHHHHH----HHHHC---CCC
Confidence 344444466788999999998775432 1222344445666665 58999988663 222222 21111 233
Q ss_pred cchhhhcccCCCccccccCCHHHH-HHHHHHhCC-CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC--------
Q 017184 206 PLNIGRLAMRGREPLFIPCTPKGC-IELLHRYGF-DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------- 275 (375)
Q Consensus 206 ~~N~G~l~~g~~~~~~~PcT~~gv-i~lL~~~~i-~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~-------- 275 (375)
.+|.| ...+.||=+.+= +.+.|+.|. +++|++|++||.++-|.+.++.++...|++|++++-.
T Consensus 122 VINag-------~~~~HPtQaL~Dl~Ti~e~~g~~~l~g~~va~vGd~~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~ 194 (311)
T PRK14804 122 VINGC-------DNMFHPCQSLADIMTIALDSPEIPLNQKQLTYIGVHNNVVNSLIGITAALGIHLTLVTPIAAKENIHA 194 (311)
T ss_pred EEECC-------CCCCChHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCCccHHHHH
Confidence 44643 224679988774 455555554 7999999999997778999999999999999998642
Q ss_pred --------------CCCHHhhccCCcEEEEc
Q 017184 276 --------------TKNPEEITRQADIIISA 292 (375)
Q Consensus 276 --------------t~~L~~~l~~ADIVIsA 292 (375)
+.|+++.++.||+|.+-
T Consensus 195 ~~~~~~~~~g~i~~~~d~~~av~~aDvvy~d 225 (311)
T PRK14804 195 QTVERAKKKGTLSWEMNLHKAVSHADYVYTD 225 (311)
T ss_pred HHHHHHHhcCCeEEEeCHHHHhCCCCEEEee
Confidence 24667888999999873
No 146
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=96.54 E-value=0.19 Score=50.68 Aligned_cols=154 Identities=12% Similarity=0.003 Sum_probs=101.3
Q ss_pred EEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCC----HHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHH
Q 017184 117 LAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTS----EQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSIL 192 (375)
Q Consensus 117 LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~vs----~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~ 192 (375)
....++=+ .|..=--+=..++.++|.++.+. +...+ -|.+.+.++-|+.- +|+|.+-.|- + ..+
T Consensus 47 ~l~~lF~e--pSTRTR~SFe~A~~~LGg~~i~l--~~~~ss~~kgEsl~DTarvls~y--~D~iviR~~~--~----~~~ 114 (332)
T PRK04284 47 NIALIFEK--DSTRTRCAFEVAAYDQGAHVTYL--GPTGSQMGKKESTKDTARVLGGM--YDGIEYRGFS--Q----RTV 114 (332)
T ss_pred EEEEEecC--CChhHHHHHHHHHHHcCCeEEEc--CCccccCCCCcCHHHHHHHHHHh--CCEEEEecCc--h----HHH
Confidence 33434443 34333345677889999998754 32222 36677888877774 8899987652 2 223
Q ss_pred hhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHh-CCCCCCCEEEEEcCC-cccHHHHHHHHhhCCCeEE
Q 017184 193 NAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRY-GFDIKGKRAVVIGRS-NIVGMPAALLLQREDATVS 270 (375)
Q Consensus 193 ~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~-~i~l~GK~vvVIGrs-~~VGkpla~lL~~~gAtVt 270 (375)
+.+...-. +-.+|.| .+...||=+.+=+--+.++ ..+++|++|++||-+ +-|.+.++.+|...|++|+
T Consensus 115 ~~~a~~s~---vPVINa~-------~~~~HPtQaL~Dl~Ti~e~~~g~l~g~kia~vGD~~~~v~~Sl~~~~~~~g~~v~ 184 (332)
T PRK04284 115 ETLAEYSG---VPVWNGL-------TDEDHPTQVLADFLTAKEHLKKPYKDIKFTYVGDGRNNVANALMQGAAIMGMDFH 184 (332)
T ss_pred HHHHHhCC---CCEEECC-------CCCCChHHHHHHHHHHHHHhcCCcCCcEEEEecCCCcchHHHHHHHHHHcCCEEE
Confidence 33322112 3345632 2346799888754444444 357999999999975 3479999999999999999
Q ss_pred EEcCC-------------------------CCCHHhhccCCcEEEEc
Q 017184 271 IVHSR-------------------------TKNPEEITRQADIIISA 292 (375)
Q Consensus 271 v~hs~-------------------------t~~L~~~l~~ADIVIsA 292 (375)
+|+-. +.|+++.++.||+|.+-
T Consensus 185 ~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvy~~ 231 (332)
T PRK04284 185 LVCPKELNPDDELLNKCKEIAAETGGKITITDDIDEGVKGSDVIYTD 231 (332)
T ss_pred EECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEC
Confidence 98633 24677889999999975
No 147
>PRK03515 ornithine carbamoyltransferase subunit I; Provisional
Probab=96.53 E-value=0.043 Score=55.35 Aligned_cols=146 Identities=13% Similarity=0.038 Sum_probs=98.8
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCCCC----CHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccC
Q 017184 127 DSATYVRNKKKACQSVGINSFEVHLPEDT----SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 202 (375)
Q Consensus 127 aS~~Yv~~k~k~a~~~GI~~~~~~l~~~v----s~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVD 202 (375)
.|..---+=..++.++|.++.++. .+. ..|.+.+.++-|+.- +|+|.+-.|- |-..+.+.+.. .
T Consensus 55 pSTRTR~SFe~A~~~LGg~~i~l~--~~~s~~~kgEsl~Dtarvls~y--~D~Iv~R~~~--~~~~~~~a~~~----~-- 122 (336)
T PRK03515 55 DSTRTRCSFEVAAYDQGARVTYLG--PSGSQIGHKESIKDTARVLGRM--YDGIQYRGYG--QEIVETLAEYA----G-- 122 (336)
T ss_pred CChhHHHHHHHHHHHcCCcEEEeC--CccccCCCCCCHHHHHHHHHHh--CcEEEEEeCC--hHHHHHHHHhC----C--
Confidence 344444455678899999988753 222 236678888888764 7899998653 22222222221 1
Q ss_pred ccccchhhhcccCCCccccccCCHHH-HHHHHHHhCC-CCCCCEEEEEcCC-cccHHHHHHHHhhCCCeEEEEcCC----
Q 017184 203 GFHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGF-DIKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR---- 275 (375)
Q Consensus 203 Gl~~~N~G~l~~g~~~~~~~PcT~~g-vi~lL~~~~i-~l~GK~vvVIGrs-~~VGkpla~lL~~~gAtVtv~hs~---- 275 (375)
+-.+|.+ .+...||=+.+ ++.+.++.|. +++|+++++||-. .-|.+.+..++...|++|++|+-.
T Consensus 123 -vPVINa~-------~~~~HPtQaLaDl~Ti~e~~g~~~l~g~~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~ 194 (336)
T PRK03515 123 -VPVWNGL-------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLAYAGDARNNMGNSLLEAAALTGLDLRLVAPKACWP 194 (336)
T ss_pred -CCEEECC-------CCCCChHHHHHHHHHHHHHhCCCCcCCCEEEEeCCCcCcHHHHHHHHHHHcCCEEEEECCchhcC
Confidence 3334531 23567998887 4555555553 7999999999975 347999999999999999998632
Q ss_pred ---------------------CCCHHhhccCCcEEEEc
Q 017184 276 ---------------------TKNPEEITRQADIIISA 292 (375)
Q Consensus 276 ---------------------t~~L~~~l~~ADIVIsA 292 (375)
+.|+++.++.||+|.+-
T Consensus 195 ~~~~~~~~~~~~~~~g~~i~~~~d~~ea~~~aDvvytd 232 (336)
T PRK03515 195 EAALVTECRALAQKNGGNITLTEDIAEGVKGADFIYTD 232 (336)
T ss_pred cHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEec
Confidence 24677889999999975
No 148
>PRK06046 alanine dehydrogenase; Validated
Probab=96.52 E-value=0.0063 Score=60.60 Aligned_cols=74 Identities=26% Similarity=0.418 Sum_probs=57.5
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhh-CCC-eEEEEcCCC---------------------CCHHhhccCCcEEEEccCCCC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQR-EDA-TVSIVHSRT---------------------KNPEEITRQADIIISAVGQPN 297 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~-~gA-tVtv~hs~t---------------------~~L~~~l~~ADIVIsAvG~p~ 297 (375)
.-+++.|||.|.. |+..+..|.. .+. .|.+++++. .++++.++ +|+||++++...
T Consensus 128 ~~~~vgiiG~G~q-a~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-aDiVv~aTps~~ 205 (326)
T PRK06046 128 DSKVVGIIGAGNQ-ARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACD-CDILVTTTPSRK 205 (326)
T ss_pred CCCEEEEECCcHH-HHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhh-CCEEEEecCCCC
Confidence 4579999999996 8888877764 344 678887652 24556665 999999999655
Q ss_pred -cccCCCcCCCcEEEEeeec
Q 017184 298 -MVRGSWIKPGAVIIDVGIN 316 (375)
Q Consensus 298 -~I~~~~vk~gavVIDvgin 316 (375)
+++.+|+|+|+.|.-+|.+
T Consensus 206 P~~~~~~l~~g~hV~~iGs~ 225 (326)
T PRK06046 206 PVVKAEWIKEGTHINAIGAD 225 (326)
T ss_pred cEecHHHcCCCCEEEecCCC
Confidence 4789999999999999964
No 149
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=96.52 E-value=0.005 Score=58.10 Aligned_cols=115 Identities=21% Similarity=0.359 Sum_probs=71.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-C-----------------CHHhhccCCcEEEEccCCCCc-
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-K-----------------NPEEITRQADIIISAVGQPNM- 298 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-~-----------------~L~~~l~~ADIVIsAvG~p~~- 298 (375)
++++||+|+|||.|.+ |.-=+.+|++.||+|++..-.. + -..+.+..+++||.||+.+.+
T Consensus 8 ~~l~~k~VlvvGgG~v-a~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt~d~~ln 86 (210)
T COG1648 8 LDLEGKKVLVVGGGSV-ALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLDDAFLVIAATDDEELN 86 (210)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChhhhcCceEEEEeCCCHHHH
Confidence 5789999999999985 9989999999999999985432 1 122455669999999997653
Q ss_pred --ccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchhhhhhh---cceeccCCCCccHHHHHHHHHHHHHH
Q 017184 299 --VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEV---ASAITPVPGGVGPMTIAMLLSNTLTS 367 (375)
Q Consensus 299 --I~~~~vk~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~---a~~iTPVPGGVGp~T~amLl~N~v~a 367 (375)
|-... ++-.+.+++.-.+. .+|+-|....++ .-+|+ -||-+|+.+.++.+.....
T Consensus 87 ~~i~~~a-~~~~i~vNv~D~p~-----------~~~f~~Pa~~~r~~l~iaIs--T~G~sP~la~~ir~~Ie~~ 146 (210)
T COG1648 87 ERIAKAA-RERRILVNVVDDPE-----------LCDFIFPAIVDRGPLQIAIS--TGGKSPVLARLLREKIEAL 146 (210)
T ss_pred HHHHHHH-HHhCCceeccCCcc-----------cCceecceeeccCCeEEEEE--CCCCChHHHHHHHHHHHHH
Confidence 21111 11123344432221 134433333222 22333 3888898888888766544
No 150
>PRK12562 ornithine carbamoyltransferase subunit F; Provisional
Probab=96.51 E-value=0.23 Score=50.11 Aligned_cols=148 Identities=14% Similarity=0.057 Sum_probs=100.4
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCCC---CCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017184 127 DSATYVRNKKKACQSVGINSFEVHLPED---TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 203 (375)
Q Consensus 127 aS~~Yv~~k~k~a~~~GI~~~~~~l~~~---vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDG 203 (375)
.|..---+=..++.++|.++.++.- .+ ...|.+.+.++-|+.- +|+|.+-.|-. ..+..+...-+
T Consensus 55 pSTRTR~SFE~A~~~LGg~~i~l~~-~~s~~~kgEsl~Dtarvls~y--~D~iviR~~~~------~~~~~~a~~~~--- 122 (334)
T PRK12562 55 DSTRTRCSFEVAAYDQGARVTYLGP-SGSQIGHKESIKDTARVLGRM--YDGIQYRGHGQ------EVVETLAEYAG--- 122 (334)
T ss_pred CCchhHHHHHHHHHHcCCeEEEeCC-ccccCCCCcCHHHHHHHHHHh--CCEEEEECCch------HHHHHHHHhCC---
Confidence 3444444567789999999987742 21 1235677788877764 88999986632 23333322222
Q ss_pred cccchhhhcccCCCccccccCCHHHH-HHHHHHhCC-CCCCCEEEEEcCC-cccHHHHHHHHhhCCCeEEEEcCC-----
Q 017184 204 FHPLNIGRLAMRGREPLFIPCTPKGC-IELLHRYGF-DIKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR----- 275 (375)
Q Consensus 204 l~~~N~G~l~~g~~~~~~~PcT~~gv-i~lL~~~~i-~l~GK~vvVIGrs-~~VGkpla~lL~~~gAtVtv~hs~----- 275 (375)
+-.+|.| .+...||=+.+= +.+.++.|. .++|+++++||-. ..|.+.++.++...|++|++|+-.
T Consensus 123 vPVINa~-------~~~~HPtQaLaDl~Ti~e~~g~~~l~gl~va~vGD~~~~v~~S~~~~~~~~G~~v~~~~P~~~~~~ 195 (334)
T PRK12562 123 VPVWNGL-------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPE 195 (334)
T ss_pred CCEEECC-------CCCCChHHHHHHHHHHHHHhCCCCcCCcEEEEECCCCCCHHHHHHHHHHHcCCEEEEECCcccCCc
Confidence 3445642 234669877774 455556554 5899999999975 347999999999999999998632
Q ss_pred --------------------CCCHHhhccCCcEEEEcc
Q 017184 276 --------------------TKNPEEITRQADIIISAV 293 (375)
Q Consensus 276 --------------------t~~L~~~l~~ADIVIsAv 293 (375)
+.|+++.++.||+|.+-.
T Consensus 196 ~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~ 233 (334)
T PRK12562 196 ASLVAECSALAQKHGGKITLTEDIAAGVKGADFIYTDV 233 (334)
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcC
Confidence 256778899999999754
No 151
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=96.51 E-value=0.0042 Score=56.66 Aligned_cols=76 Identities=28% Similarity=0.434 Sum_probs=51.2
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------CCHHhhccCCcEEEEccCC---CCcccC-
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQ---PNMVRG- 301 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------~~L~~~l~~ADIVIsAvG~---p~~I~~- 301 (375)
|+||+|.|||.|.- |+.-|+.|...|.+|++..+.. .+..|.+++||+|+..++- +.+...
T Consensus 2 l~~k~IAViGyGsQ-G~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~~~~eAv~~aDvV~~L~PD~~q~~vy~~~ 80 (165)
T PF07991_consen 2 LKGKTIAVIGYGSQ-GHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVMSVAEAVKKADVVMLLLPDEVQPEVYEEE 80 (165)
T ss_dssp HCTSEEEEES-SHH-HHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECCEHHHHHHC-SEEEE-S-HHHHHHHHHHH
T ss_pred cCCCEEEEECCChH-HHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeeccHHHHHhhCCEEEEeCChHHHHHHHHHH
Confidence 58999999999987 9999999999999999998764 3567899999999999873 222211
Q ss_pred --CCcCCCcEE-EEeeec
Q 017184 302 --SWIKPGAVI-IDVGIN 316 (375)
Q Consensus 302 --~~vk~gavV-IDvgin 316 (375)
..+++|+++ +==|+|
T Consensus 81 I~p~l~~G~~L~fahGfn 98 (165)
T PF07991_consen 81 IAPNLKPGATLVFAHGFN 98 (165)
T ss_dssp HHHHS-TT-EEEESSSHH
T ss_pred HHhhCCCCCEEEeCCcch
Confidence 247888643 333444
No 152
>PRK06823 ornithine cyclodeaminase; Validated
Probab=96.50 E-value=0.0062 Score=60.65 Aligned_cols=75 Identities=16% Similarity=0.275 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhC-C-CeEEEEcCCC--------------------CCHHhhccCCcEEEEccCCCC-
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQRE-D-ATVSIVHSRT--------------------KNPEEITRQADIIISAVGQPN- 297 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~-g-AtVtv~hs~t--------------------~~L~~~l~~ADIVIsAvG~p~- 297 (375)
.-+++.|||.|.- ++.-+..+..- . -+|.+.+++. .+.++.+++||||+++|+...
T Consensus 127 d~~~l~iiG~G~q-A~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIV~taT~s~~P 205 (315)
T PRK06823 127 HVSAIGIVGTGIQ-ARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTTLDAAEVAHAANLIVTTTPSREP 205 (315)
T ss_pred CCCEEEEECCcHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEECCHHHHhcCCCEEEEecCCCCc
Confidence 3466677777664 65555444432 2 3566665441 356788999999999999766
Q ss_pred cccCCCcCCCcEEEEeeec
Q 017184 298 MVRGSWIKPGAVIIDVGIN 316 (375)
Q Consensus 298 ~I~~~~vk~gavVIDvgin 316 (375)
+++.+|++||+.|+=+|.+
T Consensus 206 ~~~~~~l~~G~hi~~iGs~ 224 (315)
T PRK06823 206 LLQAEDIQPGTHITAVGAD 224 (315)
T ss_pred eeCHHHcCCCcEEEecCCC
Confidence 4799999999999999954
No 153
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=96.50 E-value=0.0045 Score=60.12 Aligned_cols=69 Identities=23% Similarity=0.321 Sum_probs=54.7
Q ss_pred EEcCCcccHHHHHHHHhhCCCeEEEEcCC--------------CCCHHhhccCCcEEEEccCCCCc----cc--C---CC
Q 017184 247 VIGRSNIVGMPAALLLQREDATVSIVHSR--------------TKNPEEITRQADIIISAVGQPNM----VR--G---SW 303 (375)
Q Consensus 247 VIGrs~~VGkpla~lL~~~gAtVtv~hs~--------------t~~L~~~l~~ADIVIsAvG~p~~----I~--~---~~ 303 (375)
+||.|.+ |.+++..|++.|.+|++++++ +.+..+.++++|+||.+++.+.. +. . ..
T Consensus 1 ~IGlG~m-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~~~ 79 (288)
T TIGR01692 1 FIGLGNM-GGPMAANLLKAGHPVRVFDLFPDAVEEAVAAGAQAAASPAEAAEGADRVITMLPAGQHVISVYSGDEGILPK 79 (288)
T ss_pred CCcccHh-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHhhc
Confidence 5799885 999999999999999999876 23667788999999999997542 21 1 24
Q ss_pred cCCCcEEEEeeec
Q 017184 304 IKPGAVIIDVGIN 316 (375)
Q Consensus 304 vk~gavVIDvgin 316 (375)
+++|.++||.+..
T Consensus 80 ~~~g~~vid~st~ 92 (288)
T TIGR01692 80 VAKGSLLIDCSTI 92 (288)
T ss_pred CCCCCEEEECCCC
Confidence 5789999999854
No 154
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase. Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.
Probab=96.49 E-value=0.22 Score=49.48 Aligned_cols=147 Identities=15% Similarity=0.182 Sum_probs=98.6
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017184 128 SATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 204 (375)
Q Consensus 128 S~~Yv~~k~k~a~~~GI~~~~~~l~~~v---s~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl 204 (375)
|..---+=..++.++|.++.++.-+.+. ..|.+.+..+-|+.- +|+|.+-.| .|-....+.+.. .+
T Consensus 50 STRTR~SFe~A~~~LGg~~i~l~~~~~s~~~kgEsi~Dta~vls~y--~D~iviR~~--~~~~~~~~a~~s-------~v 118 (301)
T TIGR00670 50 STRTRLSFETAMKRLGGDVVNFSDSETSSVAKGETLADTIKTLSGY--SDAIVIRHP--LEGAARLAAEVS-------EV 118 (301)
T ss_pred CchhHhHHHHHHHHcCCcEEEcCCCCcccCCCCcCHHHHHHHHHHh--CCEEEEECC--chhHHHHHHhhC-------CC
Confidence 4444446678899999998776541221 235566777766664 789998865 332333332222 23
Q ss_pred ccchhhhcccCCCccccccCCHHHH-HHHHHHhCCCCCCCEEEEEcCC--cccHHHHHHHHhhCCCeEEEEcCC------
Q 017184 205 HPLNIGRLAMRGREPLFIPCTPKGC-IELLHRYGFDIKGKRAVVIGRS--NIVGMPAALLLQREDATVSIVHSR------ 275 (375)
Q Consensus 205 ~~~N~G~l~~g~~~~~~~PcT~~gv-i~lL~~~~i~l~GK~vvVIGrs--~~VGkpla~lL~~~gAtVtv~hs~------ 275 (375)
-.+|.|- ...+.||=+.+= +.+.++.| +++|++|+++|-+ +-|.+.++.++...|++|++++-.
T Consensus 119 PVINa~~------g~~~HPtQ~LaDl~Ti~e~~g-~l~g~~va~vGD~~~~~v~~Sl~~~~a~~g~~v~~~~P~~~~~~~ 191 (301)
T TIGR00670 119 PVINAGD------GSNQHPTQTLLDLYTIYEEFG-RLDGLKIALVGDLKYGRTVHSLAEALTRFGVEVYLISPEELRMPK 191 (301)
T ss_pred CEEeCCC------CCCCCcHHHHHHHHHHHHHhC-CCCCCEEEEEccCCCCcHHHHHHHHHHHcCCEEEEECCccccCCH
Confidence 4456421 134679988874 44445555 7999999999996 457999999999999999998633
Q ss_pred ---------------CCCHHhhccCCcEEEEc
Q 017184 276 ---------------TKNPEEITRQADIIISA 292 (375)
Q Consensus 276 ---------------t~~L~~~l~~ADIVIsA 292 (375)
+.|+++.++.||+|.+-
T Consensus 192 ~~~~~~~~~G~~v~~~~d~~~a~~~aDvvyt~ 223 (301)
T TIGR00670 192 EILEELKAKGIKVRETESLEEVIDEADVLYVT 223 (301)
T ss_pred HHHHHHHHcCCEEEEECCHHHHhCCCCEEEEC
Confidence 24667889999998874
No 155
>PRK14031 glutamate dehydrogenase; Provisional
Probab=96.48 E-value=0.02 Score=59.82 Aligned_cols=52 Identities=31% Similarity=0.325 Sum_probs=44.0
Q ss_pred ccccCCHHHHH----HHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEE
Q 017184 220 LFIPCTPKGCI----ELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV 272 (375)
Q Consensus 220 ~~~PcT~~gvi----~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~ 272 (375)
+-.+.|..|+. +.+++.|.+++||+|+|.|.|+ ||..++.+|...||.|+.+
T Consensus 202 ~r~~aTg~Gv~~~~~~~~~~~g~~l~g~rVaVQGfGN-VG~~aA~~L~e~GAkVVaV 257 (444)
T PRK14031 202 IRPEATGYGNIYFLMEMLKTKGTDLKGKVCLVSGSGN-VAQYTAEKVLELGGKVVTM 257 (444)
T ss_pred CCCcccHHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEE
Confidence 34578999875 4555678999999999999998 5999999999999998863
No 156
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=96.47 E-value=0.017 Score=59.46 Aligned_cols=94 Identities=26% Similarity=0.311 Sum_probs=64.3
Q ss_pred CCHHHHHHHHHHhC--CCCCCCEEEEEcC----------------CcccHHHHHHHHhhCCCeEEEEcCCCC--------
Q 017184 224 CTPKGCIELLHRYG--FDIKGKRAVVIGR----------------SNIVGMPAALLLQREDATVSIVHSRTK-------- 277 (375)
Q Consensus 224 cT~~gvi~lL~~~~--i~l~GK~vvVIGr----------------s~~VGkpla~lL~~~gAtVtv~hs~t~-------- 277 (375)
..|.-+++.+++.- -+++||+|+|-|+ |+.+|+.+|..|..+||+|+++++...
T Consensus 168 ~~~~~I~~~~~~~~~~~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~~~~~~ 247 (399)
T PRK05579 168 AEPEEIVAAAERALSPKDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPTPAGVK 247 (399)
T ss_pred CCHHHHHHHHHHHhhhcccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccCCCCcE
Confidence 34566655555432 4689999999998 776799999999999999999876421
Q ss_pred --------CH----HhhccCCcEEEEccCCCCcc----cCCCcCCC--cEEEEeeecC
Q 017184 278 --------NP----EEITRQADIIISAVGQPNMV----RGSWIKPG--AVIIDVGINP 317 (375)
Q Consensus 278 --------~L----~~~l~~ADIVIsAvG~p~~I----~~~~vk~g--avVIDvgin~ 317 (375)
++ .+...+.|++|.++|...+- ...-+|++ ...+.+--||
T Consensus 248 ~~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d~~~~~~~~~Kikk~~~~~~l~L~~~p 305 (399)
T PRK05579 248 RIDVESAQEMLDAVLAALPQADIFIMAAAVADYRPATVAEGKIKKGEGELTLELVPNP 305 (399)
T ss_pred EEccCCHHHHHHHHHHhcCCCCEEEEcccccccccccccccCccCCCCCceEEEEeCc
Confidence 11 23346789999999865442 22335543 3566766555
No 157
>PRK08818 prephenate dehydrogenase; Provisional
Probab=96.47 E-value=0.0048 Score=62.91 Aligned_cols=76 Identities=16% Similarity=0.192 Sum_probs=58.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhC-CCeEEEEcCC---CCCHHhhccCCcEEEEccCCCC---cccC-----CCcCCCc
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQRE-DATVSIVHSR---TKNPEEITRQADIIISAVGQPN---MVRG-----SWIKPGA 308 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~-gAtVtv~hs~---t~~L~~~l~~ADIVIsAvG~p~---~I~~-----~~vk~ga 308 (375)
.-.+|+|||-+|.+|..++..|.+. +.+|+.+.+. ..++.+.+++||+||.|++... ++.. .++++|+
T Consensus 3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~~~~~~~~v~~aDlVilavPv~~~~~~l~~l~~~~~~l~~~~ 82 (370)
T PRK08818 3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPGSLDPATLLQRADVLIFSAPIRHTAALIEEYVALAGGRAAGQ 82 (370)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccccCCHHHHhcCCCEEEEeCCHHHHHHHHHHHhhhhcCCCCCe
Confidence 4578999999444699999999865 7788888653 3457788999999999999543 2321 2379999
Q ss_pred EEEEeeec
Q 017184 309 VIIDVGIN 316 (375)
Q Consensus 309 vVIDvgin 316 (375)
+|.|+|..
T Consensus 83 iVtDVgSv 90 (370)
T PRK08818 83 LWLDVTSI 90 (370)
T ss_pred EEEECCCC
Confidence 99999964
No 158
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=96.46 E-value=0.004 Score=60.49 Aligned_cols=92 Identities=16% Similarity=0.217 Sum_probs=74.2
Q ss_pred CHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCC-----------eEEEEcCC------------------
Q 017184 225 TPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-----------TVSIVHSR------------------ 275 (375)
Q Consensus 225 T~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gA-----------tVtv~hs~------------------ 275 (375)
|-.|++..++-.+.+++.-+++++|+|-. |..++.+|...+. .+++++++
T Consensus 8 ~lAgllnAlk~~g~~l~d~riv~~GAGsA-g~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~ 86 (254)
T cd00762 8 AVAGLLAALKVTKKKISEHKVLFNGAGAA-ALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLA 86 (254)
T ss_pred HHHHHHHHHHHhCCChhhcEEEEECcCHH-HHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHH
Confidence 45678899999999999999999999987 9999998877543 58888765
Q ss_pred --------CCCHHhhcc--CCcEEEEccCCCCcccCCCcC------CCcEEEEeeecCC
Q 017184 276 --------TKNPEEITR--QADIIISAVGQPNMVRGSWIK------PGAVIIDVGINPV 318 (375)
Q Consensus 276 --------t~~L~~~l~--~ADIVIsAvG~p~~I~~~~vk------~gavVIDvgin~~ 318 (375)
..+|.+.++ ++|++|-..+.|+.+++|+++ +.-+|+=+. ||.
T Consensus 87 ~~~~~~~~~~~L~eav~~~kptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NPt 144 (254)
T cd00762 87 RFANPERESGDLEDAVEAAKPDFLIGVSRVGGAFTPEVIRAXAEINERPVIFALS-NPT 144 (254)
T ss_pred HHcCcccccCCHHHHHHhhCCCEEEEeCCCCCCCCHHHHHHHhhcCCCCEEEECC-CcC
Confidence 125778888 999999999999999999885 355776665 443
No 159
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=96.45 E-value=0.0059 Score=53.74 Aligned_cols=53 Identities=26% Similarity=0.481 Sum_probs=43.7
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCC--eEEEEcCCC------------------------CCHHhhccCCcEEEEccCCC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT------------------------KNPEEITRQADIIISAVGQP 296 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gA--tVtv~hs~t------------------------~~L~~~l~~ADIVIsAvG~p 296 (375)
||+|||+++.||..++.+|...+. ++.+++... .+..+.+++|||||.++|.|
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~ 80 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVP 80 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEecccc
Confidence 799999966679999999998873 688887651 24568899999999999976
No 160
>PLN03129 NADP-dependent malic enzyme; Provisional
Probab=96.45 E-value=0.02 Score=61.42 Aligned_cols=97 Identities=18% Similarity=0.246 Sum_probs=77.8
Q ss_pred ccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhh-----CCC-------eEEEEcCC------------
Q 017184 220 LFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQR-----EDA-------TVSIVHSR------------ 275 (375)
Q Consensus 220 ~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~-----~gA-------tVtv~hs~------------ 275 (375)
+---++-.|++..++-.+.+++..+++++|+|.+ |..++.+|.. .|. .+++++++
T Consensus 299 GTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsA-gigia~ll~~~~~~~~Gls~eeA~~~i~~vD~~GLi~~~r~~~l~ 377 (581)
T PLN03129 299 GTAAVALAGLLAALRATGGDLADQRILFAGAGEA-GTGIAELIALAMSRQTGISEEEARKRIWLVDSKGLVTKSRKDSLQ 377 (581)
T ss_pred hHHHHHHHHHHHHHHHhCCchhhceEEEECCCHH-HHHHHHHHHHHHHhhcCCChhhhcCcEEEEcCCCeEeCCCCccCh
Confidence 3345566788999999999999999999999997 9999988876 354 68888764
Q ss_pred ------------CCCHHhhccC--CcEEEEccCCCCcccCCCcC------CCcEEEEeeecCC
Q 017184 276 ------------TKNPEEITRQ--ADIIISAVGQPNMVRGSWIK------PGAVIIDVGINPV 318 (375)
Q Consensus 276 ------------t~~L~~~l~~--ADIVIsAvG~p~~I~~~~vk------~gavVIDvgin~~ 318 (375)
..+|.+.++. +|++|-+.+.++.+++++|+ +.-+|+=+. ||.
T Consensus 378 ~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~~rPIIFaLS-NPt 439 (581)
T PLN03129 378 PFKKPFAHDHEPGASLLEAVKAIKPTVLIGLSGVGGTFTKEVLEAMASLNERPIIFALS-NPT 439 (581)
T ss_pred HHHHHHHhhcccCCCHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC-CCC
Confidence 1367788888 99999999988999999886 566777666 443
No 161
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=96.44 E-value=0.054 Score=54.55 Aligned_cols=145 Identities=14% Similarity=0.117 Sum_probs=98.3
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCC----CHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017184 128 SATYVRNKKKACQSVGINSFEVHLPEDT----SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 203 (375)
Q Consensus 128 S~~Yv~~k~k~a~~~GI~~~~~~l~~~v----s~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDG 203 (375)
|..=--+=..++.++|.++.++ +.+. ..|.+.+.++-|+.- +|+|.+--| .+ ..++.+...-+
T Consensus 57 STRTR~SFe~A~~~LGg~~i~l--~~~~ss~~kgEsl~DTarvls~y--~D~iv~R~~--~~----~~~~~~a~~~~--- 123 (334)
T PRK01713 57 STRTRCAFEVAAYDQGAQVTYI--DPNSSQIGHKESMKDTARVLGRM--YDAIEYRGF--KQ----SIVNELAEYAG--- 123 (334)
T ss_pred CchHHHHHHHHHHHcCCeEEEc--CCccccCCCCcCHHHHHHHHHHh--CCEEEEEcC--ch----HHHHHHHHhCC---
Confidence 4333335567889999998765 3221 235677777777764 889998865 22 22333322112
Q ss_pred cccchhhhcccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC-cccHHHHHHHHhhCCCeEEEEcCC------
Q 017184 204 FHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR------ 275 (375)
Q Consensus 204 l~~~N~G~l~~g~~~~~~~PcT~~g-vi~lL~~~~i~l~GK~vvVIGrs-~~VGkpla~lL~~~gAtVtv~hs~------ 275 (375)
+-.+|.+ .+...||=+.+ ++.+.++.|.+++|+++++||-+ ..|.+.++.++...|++|++|+-.
T Consensus 124 vPVINa~-------~~~~HPtQaL~Dl~Ti~e~~g~~l~gl~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~p~~ 196 (334)
T PRK01713 124 VPVFNGL-------TDEFHPTQMLADVLTMIENCDKPLSEISYVYIGDARNNMGNSLLLIGAKLGMDVRICAPKALLPEA 196 (334)
T ss_pred CCEEECC-------CCCCChHHHHHHHHHHHHHcCCCcCCcEEEEECCCccCHHHHHHHHHHHcCCEEEEECCchhcCCH
Confidence 3444541 23467997777 45566666657999999999986 447999999999999999998632
Q ss_pred -------------------CCCHHhhccCCcEEEEc
Q 017184 276 -------------------TKNPEEITRQADIIISA 292 (375)
Q Consensus 276 -------------------t~~L~~~l~~ADIVIsA 292 (375)
+.|+.+.+++||+|.+-
T Consensus 197 ~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvVyt~ 232 (334)
T PRK01713 197 SLVEMCEKFAKESGARITVTDDIDKAVKGVDFVHTD 232 (334)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 24677889999999974
No 162
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.44 E-value=0.0065 Score=59.49 Aligned_cols=72 Identities=19% Similarity=0.288 Sum_probs=55.5
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------CCHHhhccC---CcEEEEccCCCCc----cc--
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQ---ADIIISAVGQPNM----VR-- 300 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------~~L~~~l~~---ADIVIsAvG~p~~----I~-- 300 (375)
++.+||.|.+ |.+++..|.+.|.+|++++++. .+.++..++ +|+||++++.+.. +.
T Consensus 2 ~Ig~IGlG~m-G~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~~~~~~v~~~i 80 (299)
T PRK12490 2 KLGLIGLGKM-GGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAGEVTESVIKDL 80 (299)
T ss_pred EEEEEcccHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCchHHHHHHHHH
Confidence 5899999986 9999999999999999998762 345566555 6999999997632 21
Q ss_pred CCCcCCCcEEEEeeec
Q 017184 301 GSWIKPGAVIIDVGIN 316 (375)
Q Consensus 301 ~~~vk~gavVIDvgin 316 (375)
...+++|.++||++..
T Consensus 81 ~~~l~~g~ivid~st~ 96 (299)
T PRK12490 81 YPLLSPGDIVVDGGNS 96 (299)
T ss_pred hccCCCCCEEEECCCC
Confidence 1346789999999654
No 163
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=96.42 E-value=0.0048 Score=63.45 Aligned_cols=74 Identities=26% Similarity=0.378 Sum_probs=55.4
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC---------------CHHhh---------------ccCCcEEEEc
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------NPEEI---------------TRQADIIISA 292 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~---------------~L~~~---------------l~~ADIVIsA 292 (375)
++|.|||.|.+ |.|+|..|++.|.+|+.++++.. ++.+. .++||+||.+
T Consensus 4 ~kI~VIGlG~~-G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvii~ 82 (415)
T PRK11064 4 ETISVIGLGYI-GLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFLIA 82 (415)
T ss_pred cEEEEECcchh-hHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEEEE
Confidence 68999999885 99999999999999999987532 22222 2379999999
Q ss_pred cCCC---------Cccc------CCCcCCCcEEEEeeecC
Q 017184 293 VGQP---------NMVR------GSWIKPGAVIIDVGINP 317 (375)
Q Consensus 293 vG~p---------~~I~------~~~vk~gavVIDvgin~ 317 (375)
++.| ..+. ...+++|++||+....+
T Consensus 83 vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~ 122 (415)
T PRK11064 83 VPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSP 122 (415)
T ss_pred cCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCC
Confidence 9986 1221 13568899998876643
No 164
>PRK02255 putrescine carbamoyltransferase; Provisional
Probab=96.40 E-value=0.3 Score=49.37 Aligned_cols=155 Identities=11% Similarity=0.118 Sum_probs=102.8
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHH
Q 017184 116 GLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSIL 192 (375)
Q Consensus 116 ~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~v---s~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~ 192 (375)
+....++=+ .|..=--+=..++.++|-++.++.- .+. ..|.+.+.++-|+.- +|+|.+-.+ .|-. +
T Consensus 43 k~v~~lF~e--pSTRTR~SFe~A~~~LGg~~i~l~~-~~ss~~kgEsl~Dtarvls~y--~D~iviR~~--~~~~----~ 111 (338)
T PRK02255 43 KTLGMIFEQ--SSTRTRVSFETAMTQLGGHAQYLAP-GQIQLGGHESLEDTARVLSRL--VDIIMARVD--RHQT----V 111 (338)
T ss_pred CEEEEEeCC--CCcchHHHHHHHHHHcCCeEEEeCc-ccccCCCCcCHHHHHHHHHHh--CcEEEEecC--ChHH----H
Confidence 344444443 3433333567889999999887752 221 235677777777764 788888765 3222 2
Q ss_pred hhCCcccccCccccchhhhcccCCCccccccCCHHH-HHHHHHHhC--CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeE
Q 017184 193 NAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYG--FDIKGKRAVVIGRSNIVGMPAALLLQREDATV 269 (375)
Q Consensus 193 ~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~g-vi~lL~~~~--i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtV 269 (375)
+.+...- .+-.+|.+ .+...||=+.+ ++.+.++.| -+++|++|++||-..-|.+.++.++...|++|
T Consensus 112 ~~~a~~~---~vPVINa~-------~~~~HPtQaLaDl~Ti~e~~g~g~~l~glkv~~vGD~~~v~~Sl~~~~~~~g~~v 181 (338)
T PRK02255 112 VELAKYA---TVPVINGM-------SDYNHPTQELGDLFTMIEHLPEGKKLEDCKVVFVGDATQVCVSLMFIATKMGMDF 181 (338)
T ss_pred HHHHHhC---CCCEEECC-------CCCCChHHHHHHHHHHHHHhCCCCCCCCCEEEEECCCchHHHHHHHHHHhCCCEE
Confidence 2232211 23445631 23457997777 455556654 36999999999997778999999999999999
Q ss_pred EEEcCC-------------------------CCCHHhhccCCcEEEE
Q 017184 270 SIVHSR-------------------------TKNPEEITRQADIIIS 291 (375)
Q Consensus 270 tv~hs~-------------------------t~~L~~~l~~ADIVIs 291 (375)
++|+-. +.|+++.++.||+|.+
T Consensus 182 ~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~ 228 (338)
T PRK02255 182 VHFGPKGYQLPEEHLAIAEENCEVSGGSVLVTDDVDEAVKDADFVYT 228 (338)
T ss_pred EEECCCccccCHHHHHHHHHHHHhcCCeEEEEcCHHHHhCCCCEEEE
Confidence 998632 2567889999999998
No 165
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.39 E-value=0.0052 Score=59.79 Aligned_cols=70 Identities=20% Similarity=0.359 Sum_probs=52.4
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCC----eEEEEcCCC---------------CCHHhhccCCcEEEEccCCCCcc----
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDA----TVSIVHSRT---------------KNPEEITRQADIIISAVGQPNMV---- 299 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gA----tVtv~hs~t---------------~~L~~~l~~ADIVIsAvG~p~~I---- 299 (375)
+++.+||.|.+ |.+++..|.+.|. +|++++++. .+..+.+++||+||.++. |..+
T Consensus 3 ~~IgfIG~G~M-G~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~~~~~e~~~~aDiIiLavk-P~~~~~vl 80 (272)
T PRK12491 3 KQIGFIGCGNM-GIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITITTNNNEVANSADILILSIK-PDLYSSVI 80 (272)
T ss_pred CeEEEECccHH-HHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEEeCCcHHHHhhCCEEEEEeC-hHHHHHHH
Confidence 47999999986 9999999998773 688887642 234456789999999998 4422
Q ss_pred cC--CCcCCCcEEEEee
Q 017184 300 RG--SWIKPGAVIIDVG 314 (375)
Q Consensus 300 ~~--~~vk~gavVIDvg 314 (375)
.. +.++++.+|||+.
T Consensus 81 ~~l~~~~~~~~lvISi~ 97 (272)
T PRK12491 81 NQIKDQIKNDVIVVTIA 97 (272)
T ss_pred HHHHHhhcCCcEEEEeC
Confidence 11 3467788999985
No 166
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=96.35 E-value=0.0062 Score=59.72 Aligned_cols=72 Identities=21% Similarity=0.304 Sum_probs=55.6
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-------------CCHHhhccCCcEEEEccCCCC----cc-cCC---
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVGQPN----MV-RGS--- 302 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-------------~~L~~~l~~ADIVIsAvG~p~----~I-~~~--- 302 (375)
+|.+||.|.+ |.+++..|++.|.+|++++++. .+..+..+++|+||.++..+. .+ ..+
T Consensus 2 ~Ig~IGlG~M-G~~ma~~L~~~G~~v~v~~~~~~~~~~~~~g~~~~~s~~~~~~~advVi~~v~~~~~v~~v~~~~~g~~ 80 (292)
T PRK15059 2 KLGFIGLGIM-GTPMAINLARAGHQLHVTTIGPVADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCT 80 (292)
T ss_pred eEEEEccCHH-HHHHHHHHHHCCCeEEEEeCCHhHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCCcchh
Confidence 5899999986 9999999999999999987642 245567789999999998653 12 211
Q ss_pred -CcCCCcEEEEeeec
Q 017184 303 -WIKPGAVIIDVGIN 316 (375)
Q Consensus 303 -~vk~gavVIDvgin 316 (375)
.+++|.++||++..
T Consensus 81 ~~~~~g~ivvd~sT~ 95 (292)
T PRK15059 81 KASLKGKTIVDMSSI 95 (292)
T ss_pred ccCCCCCEEEECCCC
Confidence 35789999998854
No 167
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.33 E-value=0.0071 Score=58.48 Aligned_cols=72 Identities=15% Similarity=0.266 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCC----CeEEEEcCCC----------------CCHHhhccCCcEEEEccCCCCc--
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQRED----ATVSIVHSRT----------------KNPEEITRQADIIISAVGQPNM-- 298 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~g----AtVtv~hs~t----------------~~L~~~l~~ADIVIsAvG~p~~-- 298 (375)
++.++.+||.|.+ |.+++..|++.| .+|++++|+. .+..+.++++|+||.++....+
T Consensus 2 ~~mkI~~IG~G~m-G~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~~~~~e~~~~aDvVilav~p~~~~~ 80 (279)
T PRK07679 2 SIQNISFLGAGSI-AEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGTHNKKELLTDANILFLAMKPKDVAE 80 (279)
T ss_pred CCCEEEEECccHH-HHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEeCCHHHHHhcCCEEEEEeCHHHHHH
Confidence 3468999999886 999999999887 5788888742 1344567899999999985432
Q ss_pred -cc--CCCcCCCcEEEEe
Q 017184 299 -VR--GSWIKPGAVIIDV 313 (375)
Q Consensus 299 -I~--~~~vk~gavVIDv 313 (375)
+. .+.++++.+|||+
T Consensus 81 vl~~l~~~~~~~~liIs~ 98 (279)
T PRK07679 81 ALIPFKEYIHNNQLIISL 98 (279)
T ss_pred HHHHHHhhcCCCCEEEEE
Confidence 21 1346788999997
No 168
>PRK13529 malate dehydrogenase; Provisional
Probab=96.31 E-value=0.029 Score=60.02 Aligned_cols=164 Identities=20% Similarity=0.247 Sum_probs=110.7
Q ss_pred HHHHHHHHHc-CCe---EEEEeCCCCCC--------------------------HHHHHHHHHHhhcCCCccEEEEeCCC
Q 017184 133 RNKKKACQSV-GIN---SFEVHLPEDTS--------------------------EQEVLKHISVFNDDPSVHGILVQLPL 182 (375)
Q Consensus 133 ~~k~k~a~~~-GI~---~~~~~l~~~vs--------------------------~~el~~~I~~LN~D~~V~GIlVqlPL 182 (375)
..|.-.+..+ ||+ +.-+.|+..+. -+|+.++++++- |++ +||+==
T Consensus 173 ~GKl~Ly~a~aGI~P~~~lPI~LDvGTnNe~Ll~DP~YlG~r~~R~~g~eY~~f~defv~av~~~~--P~~---~I~~ED 247 (563)
T PRK13529 173 IGKLSLYTACGGIDPARTLPVVLDVGTNNEQLLNDPLYLGWRHPRIRGEEYDEFVDEFVQAVKRRF--PNA---LLQFED 247 (563)
T ss_pred ccHHHHhhccCCCChhheeceEEecCCCchhhccCccccCcCCCCCchHHHHHHHHHHHHHHHHhC--CCe---EEehhh
Confidence 4566666666 688 77677764322 257777777775 553 444321
Q ss_pred CCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHH
Q 017184 183 PCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 262 (375)
Q Consensus 183 p~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL 262 (375)
-..-+.-++++.. .+++-.+| ++..+---+|-.|++..++-.+.+++..++++.|+|.+ |..+|.+|
T Consensus 248 f~~~~af~iL~ry--r~~i~~Fn----------DDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsA-giGia~ll 314 (563)
T PRK13529 248 FAQKNARRILERY--RDEICTFN----------DDIQGTGAVTLAGLLAALKITGEPLSDQRIVFLGAGSA-GCGIADQI 314 (563)
T ss_pred cCCchHHHHHHHh--ccCCCeec----------cccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHH
Confidence 1222334444443 22332222 22334445566788999999999999999999999997 99999988
Q ss_pred hh----CCC-------eEEEEcCC--------------------C------------CCHHhhccCC--cEEEEccCCCC
Q 017184 263 QR----EDA-------TVSIVHSR--------------------T------------KNPEEITRQA--DIIISAVGQPN 297 (375)
Q Consensus 263 ~~----~gA-------tVtv~hs~--------------------t------------~~L~~~l~~A--DIVIsAvG~p~ 297 (375)
.. +|. .+++|+++ + .+|.+.++.+ |++|-..+.|+
T Consensus 315 ~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~l~~~k~~fa~~~~~~~~~~~~~~~~~L~e~v~~~kPtvLIG~S~~~g 394 (563)
T PRK13529 315 VAAMVREGLSEEEARKRFFMVDRQGLLTDDMPDLLDFQKPYARKREELADWDTEGDVISLLEVVRNVKPTVLIGVSGQPG 394 (563)
T ss_pred HHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCcchHHHHHHhhhcccccccccccCCCCHHHHHhccCCCEEEEecCCCC
Confidence 86 576 68888765 0 2578889988 99999999889
Q ss_pred cccCCCcCC------CcEEEEee
Q 017184 298 MVRGSWIKP------GAVIIDVG 314 (375)
Q Consensus 298 ~I~~~~vk~------gavVIDvg 314 (375)
.+++++|+. .-+|+=+.
T Consensus 395 ~Ft~evv~~Ma~~~erPIIFaLS 417 (563)
T PRK13529 395 AFTEEIVKEMAAHCERPIIFPLS 417 (563)
T ss_pred CCCHHHHHHHHhcCCCCEEEECC
Confidence 999988753 45666655
No 169
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=96.26 E-value=0.32 Score=48.30 Aligned_cols=155 Identities=17% Similarity=0.239 Sum_probs=101.7
Q ss_pred EEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCC--CCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhh
Q 017184 117 LAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPED--TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNA 194 (375)
Q Consensus 117 LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~--vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~ 194 (375)
....++=+ .|..=--+=..++.++|.++.++.-... ...|.+.+.+.-|+.- +|+|.+-.|-.. .++.
T Consensus 41 ~v~~lF~e--pSTRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y--~D~iv~R~~~~~------~~~~ 110 (304)
T TIGR00658 41 TLALIFEK--PSTRTRVSFEVAAYQLGGHPLYLNPNDLQLGRGESIKDTARVLSRY--VDGIMARVYKHE------DVEE 110 (304)
T ss_pred EEEEEecC--CCcchHHHHHHHHHHcCCCEEEeCCccccCCCCCCHHHHHHHHHHh--CCEEEEECCChH------HHHH
Confidence 44444433 3433334557889999999887743211 1135677777777764 788998866321 2222
Q ss_pred CCcccccCccccchhhhcccCCCccccccCCHHHH-HHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEc
Q 017184 195 VSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGC-IELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVH 273 (375)
Q Consensus 195 I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gv-i~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~h 273 (375)
+...- .+-.+|.| .....||=+.+= +.+.++.| .++|.+|+++|-..-|.+.++.+|...|++|++++
T Consensus 111 ~a~~~---~vPVINa~-------~~~~HPtQaL~Dl~Ti~e~~g-~l~g~~v~~vGd~~~v~~Sl~~~l~~~g~~v~~~~ 179 (304)
T TIGR00658 111 LAKYA---SVPVINGL-------TDLFHPCQALADLLTIIEHFG-KLKGVKVVYVGDGNNVCNSLMLAGAKLGMDVVVAT 179 (304)
T ss_pred HHHhC---CCCEEECC-------CCCCChHHHHHHHHHHHHHhC-CCCCcEEEEEeCCCchHHHHHHHHHHcCCEEEEEC
Confidence 32211 23445642 134668877774 44445554 59999999999966689999999999999999996
Q ss_pred CC-------------------------CCCHHhhccCCcEEEEc
Q 017184 274 SR-------------------------TKNPEEITRQADIIISA 292 (375)
Q Consensus 274 s~-------------------------t~~L~~~l~~ADIVIsA 292 (375)
-. +.|+++.+++||+|.+-
T Consensus 180 P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvy~~ 223 (304)
T TIGR00658 180 PEGYEPDADIVKKAQEIAKENGGSVELTHDPVEAVKGADVIYTD 223 (304)
T ss_pred CchhcCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 22 24677899999999975
No 170
>PRK11891 aspartate carbamoyltransferase; Provisional
Probab=96.25 E-value=0.092 Score=54.69 Aligned_cols=150 Identities=13% Similarity=0.084 Sum_probs=97.4
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017184 128 SATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 204 (375)
Q Consensus 128 S~~Yv~~k~k~a~~~GI~~~~~~l~~~v---s~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl 204 (375)
|.----+=..++.++|.++.++.=+.+. ..|-+.+...-|+.- +|+|.+-.| .|-..+.+.+.. .+
T Consensus 137 STRTR~SFE~A~~~LGg~~i~l~~~~~ss~~kGESi~DTarvLs~y--~D~IviR~~--~~~~~~e~A~~s-------~v 205 (429)
T PRK11891 137 STRTRVSFGAAFCRLGGSVCDTTGFTFSSMAKGESIYDTSRVMSGY--VDALVIRHP--EQGSVAEFARAT-------NL 205 (429)
T ss_pred CchhHHHHHHHHHHcCCeEEEeCCccccCCCCCCCHHHHHHHHHHh--CCEEEEeCC--chhHHHHHHHhC-------CC
Confidence 4433345677889999998877321111 124566666666654 788888865 322223332221 23
Q ss_pred ccchhhhcccCCCccccccCCHHH-HHHHHHHhCC---CCCCCEEEEEcCC--cccHHHHHHHHhhC-CCeEEEEcCC--
Q 017184 205 HPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGF---DIKGKRAVVIGRS--NIVGMPAALLLQRE-DATVSIVHSR-- 275 (375)
Q Consensus 205 ~~~N~G~l~~g~~~~~~~PcT~~g-vi~lL~~~~i---~l~GK~vvVIGrs--~~VGkpla~lL~~~-gAtVtv~hs~-- 275 (375)
-.+|.| ..+.+.||=+.+ ++.+.++.+. .++|++|+++|-+ +-|.+.++.+|... |++|++++-.
T Consensus 206 PVINAg------dg~~~HPtQaLaDl~Ti~E~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~~~G~~v~l~~P~~~ 279 (429)
T PRK11891 206 PVINGG------DGPGEHPSQALLDLYTIQREFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLALYRGLKFTLVSPPTL 279 (429)
T ss_pred CEEECC------CCCCCCcHHHHHHHHHHHHHhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHHhcCCEEEEECCCcc
Confidence 445642 124567998887 4555566542 4899999999996 34588888887775 9999998632
Q ss_pred -------------------CCCHHhhccCCcEEEEccC
Q 017184 276 -------------------TKNPEEITRQADIIISAVG 294 (375)
Q Consensus 276 -------------------t~~L~~~l~~ADIVIsAvG 294 (375)
+.|+.+.++.||+|.+..+
T Consensus 280 ~~~~~~~~~~~~~G~~v~~~~d~~eav~~ADVVYt~~~ 317 (429)
T PRK11891 280 EMPAYIVEQISRNGHVIEQTDDLAAGLRGADVVYATRI 317 (429)
T ss_pred ccCHHHHHHHHhcCCeEEEEcCHHHHhCCCCEEEEcCc
Confidence 3577889999999998654
No 171
>PLN02527 aspartate carbamoyltransferase
Probab=96.23 E-value=0.12 Score=51.47 Aligned_cols=148 Identities=14% Similarity=0.141 Sum_probs=97.6
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCC-CC---CHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017184 128 SATYVRNKKKACQSVGINSFEVHLPE-DT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 203 (375)
Q Consensus 128 S~~Yv~~k~k~a~~~GI~~~~~~l~~-~v---s~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDG 203 (375)
|..=--+=..++.++|.++.++.-.. +. ..|.+.+.++-|+.- +|+|.+-.|-.. ....+.+.. .
T Consensus 50 StRTR~SFe~A~~~LGg~~i~l~~~~~~s~~~kgEs~~Dta~vls~y--~D~iviR~~~~~--~~~~~a~~~----~--- 118 (306)
T PLN02527 50 STRTRLSFESAMKRLGGEVLTTENAGEFSSAAKGETLEDTIRTVEGY--SDIIVLRHFESG--AARRAAATA----E--- 118 (306)
T ss_pred CchhHHHHHHHHHHcCCCEEEeCCCCCccccCCCcCHHHHHHHHHHh--CcEEEEECCChh--HHHHHHHhC----C---
Confidence 44444466788999999998776431 11 236677777777764 789998866322 223332221 1
Q ss_pred cccchhhhcccCCCccccccCCHHHHH-HHHHHhCCCCCCCEEEEEcCC-c-ccHHHHHHHHhhC-CCeEEEEcCC----
Q 017184 204 FHPLNIGRLAMRGREPLFIPCTPKGCI-ELLHRYGFDIKGKRAVVIGRS-N-IVGMPAALLLQRE-DATVSIVHSR---- 275 (375)
Q Consensus 204 l~~~N~G~l~~g~~~~~~~PcT~~gvi-~lL~~~~i~l~GK~vvVIGrs-~-~VGkpla~lL~~~-gAtVtv~hs~---- 275 (375)
+-.+|.|- .+...||=+.+=+ .+.++.| +++|++|+++|-+ + -|.+.++..|... |++|++++-.
T Consensus 119 vPVINa~~------g~~~HPtQ~LaDl~Ti~e~~g-~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P~~~~~ 191 (306)
T PLN02527 119 IPVINAGD------GPGQHPTQALLDVYTIQREIG-RLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAPDVVKM 191 (306)
T ss_pred CCEEECCC------CCCCChHHHHHHHHHHHHHhC-CcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECCCccCC
Confidence 33445421 2346799888744 4444454 6999999999976 3 2588888887776 8999988532
Q ss_pred -----------------CCCHHhhccCCcEEEEcc
Q 017184 276 -----------------TKNPEEITRQADIIISAV 293 (375)
Q Consensus 276 -----------------t~~L~~~l~~ADIVIsAv 293 (375)
+.|+++.++.||+|.+..
T Consensus 192 ~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~ 226 (306)
T PLN02527 192 KDDIKDYLTSKGVEWEESSDLMEVASKCDVLYQTR 226 (306)
T ss_pred CHHHHHHHHHcCCEEEEEcCHHHHhCCCCEEEECC
Confidence 247789999999999854
No 172
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.21 E-value=0.0084 Score=62.18 Aligned_cols=71 Identities=21% Similarity=0.363 Sum_probs=55.1
Q ss_pred EEEEEcC-CcccHHHHHHHHhhCCCeEEEEcCCC---------------CCHHhhccCCcEEEEccCCCC---ccc--CC
Q 017184 244 RAVVIGR-SNIVGMPAALLLQREDATVSIVHSRT---------------KNPEEITRQADIIISAVGQPN---MVR--GS 302 (375)
Q Consensus 244 ~vvVIGr-s~~VGkpla~lL~~~gAtVtv~hs~t---------------~~L~~~l~~ADIVIsAvG~p~---~I~--~~ 302 (375)
++.|||. |. +|..++..|.+.|.+|+++.++. .+..+.+.++|+||.+++... .+. ..
T Consensus 2 kI~IIGG~G~-mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~~~~~e~~~~aDvVIlavp~~~~~~vl~~l~~ 80 (437)
T PRK08655 2 KISIIGGTGG-LGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYANDNIDAAKDADIVIISVPINVTEDVIKEVAP 80 (437)
T ss_pred EEEEEecCCH-HHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeeccCHHHHhccCCEEEEecCHHHHHHHHHHHHh
Confidence 6899984 55 59999999999999999987652 245567889999999998532 222 24
Q ss_pred CcCCCcEEEEeee
Q 017184 303 WIKPGAVIIDVGI 315 (375)
Q Consensus 303 ~vk~gavVIDvgi 315 (375)
+++++++|+|++.
T Consensus 81 ~l~~~~iViDvsS 93 (437)
T PRK08655 81 HVKEGSLLMDVTS 93 (437)
T ss_pred hCCCCCEEEEccc
Confidence 5789999999995
No 173
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=96.20 E-value=0.0057 Score=59.46 Aligned_cols=91 Identities=22% Similarity=0.325 Sum_probs=70.1
Q ss_pred CHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhC----CC-------eEEEEcCC------------------
Q 017184 225 TPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRE----DA-------TVSIVHSR------------------ 275 (375)
Q Consensus 225 T~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~----gA-------tVtv~hs~------------------ 275 (375)
|-.|++..++-.+.+|+..+++++|+|-. |-.++.+|... |. .+++++++
T Consensus 8 ~lAgll~Al~~~g~~l~d~riv~~GAGsA-g~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a 86 (255)
T PF03949_consen 8 VLAGLLNALRVTGKKLSDQRIVFFGAGSA-GIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFA 86 (255)
T ss_dssp HHHHHHHHHHHHTS-GGG-EEEEEB-SHH-HHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHcEEEEeCCChh-HHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhh
Confidence 34678999999999999999999999987 99998888776 76 48888765
Q ss_pred --------CCCHHhhccCC--cEEEEccCCCCcccCCCcCC------CcEEEEeeecC
Q 017184 276 --------TKNPEEITRQA--DIIISAVGQPNMVRGSWIKP------GAVIIDVGINP 317 (375)
Q Consensus 276 --------t~~L~~~l~~A--DIVIsAvG~p~~I~~~~vk~------gavVIDvgin~ 317 (375)
..+|.+.++.+ |++|-..|.|+.+++|+++. .-+|+=+. ||
T Consensus 87 ~~~~~~~~~~~L~eav~~~kPtvLIG~S~~~g~ft~evv~~Ma~~~erPIIF~LS-NP 143 (255)
T PF03949_consen 87 RKTNPEKDWGSLLEAVKGAKPTVLIGLSGQGGAFTEEVVRAMAKHNERPIIFPLS-NP 143 (255)
T ss_dssp BSSSTTT--SSHHHHHHCH--SEEEECSSSTTSS-HHHHHHCHHHSSSEEEEE-S-SS
T ss_pred ccCcccccccCHHHHHHhcCCCEEEEecCCCCcCCHHHHHHHhccCCCCEEEECC-CC
Confidence 12788999999 99999999999999998853 44666665 44
No 174
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=96.18 E-value=0.0082 Score=58.79 Aligned_cols=72 Identities=14% Similarity=0.174 Sum_probs=54.5
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------CCH---HhhccCCcEEEEccCCCC---ccc--C
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNP---EEITRQADIIISAVGQPN---MVR--G 301 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------~~L---~~~l~~ADIVIsAvG~p~---~I~--~ 301 (375)
+|.|||.|.+ |.+++..|.+.|.+|++.+++. .++ .+.+.++|+||.+++... .+. .
T Consensus 2 ~Ig~IGlG~m-G~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~~~~~v~~~l~ 80 (298)
T TIGR00872 2 QLGLIGLGRM-GANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHGIVDAVLEELA 80 (298)
T ss_pred EEEEEcchHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCchHHHHHHHHHH
Confidence 6899999886 9999999999999999988762 122 334567899999988652 121 1
Q ss_pred CCcCCCcEEEEeeec
Q 017184 302 SWIKPGAVIIDVGIN 316 (375)
Q Consensus 302 ~~vk~gavVIDvgin 316 (375)
..+++|.+|||.+..
T Consensus 81 ~~l~~g~ivid~st~ 95 (298)
T TIGR00872 81 PTLEKGDIVIDGGNS 95 (298)
T ss_pred hhCCCCCEEEECCCC
Confidence 346889999998765
No 175
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.14 E-value=0.0098 Score=58.70 Aligned_cols=73 Identities=22% Similarity=0.272 Sum_probs=56.5
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC----------------------------CCHHhhccCCcEEEEcc
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------------------KNPEEITRQADIIISAV 293 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t----------------------------~~L~~~l~~ADIVIsAv 293 (375)
..+|.|||.|.+ |.+++..|++.|.+|++++++. .++.+.++++|+||.++
T Consensus 4 ~m~I~iIG~G~m-G~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v 82 (328)
T PRK14618 4 GMRVAVLGAGAW-GTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAV 82 (328)
T ss_pred CCeEEEECcCHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEEC
Confidence 357999999885 9999999999999999987641 14556678999999999
Q ss_pred CCCCccc-CCCcCCCcEEEEeee
Q 017184 294 GQPNMVR-GSWIKPGAVIIDVGI 315 (375)
Q Consensus 294 G~p~~I~-~~~vk~gavVIDvgi 315 (375)
....+-. -+.++++.++||+..
T Consensus 83 ~~~~~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 83 PSKALRETLAGLPRALGYVSCAK 105 (328)
T ss_pred chHHHHHHHHhcCcCCEEEEEee
Confidence 8764311 134678889999864
No 176
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=96.14 E-value=0.58 Score=46.56 Aligned_cols=146 Identities=14% Similarity=0.111 Sum_probs=97.3
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017184 128 SATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 204 (375)
Q Consensus 128 S~~Yv~~k~k~a~~~GI~~~~~~l~~~v---s~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl 204 (375)
|..---+=..++.++|.++.++. +.+. .-|.+.+.++-|+.- +|+|.+-.|- | ..++.+...-+ +
T Consensus 49 STRTR~SFE~A~~~LGg~~i~l~-~~~ss~~kgEsl~Dt~~vls~y--~D~iviR~~~--~----~~~~~~a~~~~---v 116 (302)
T PRK14805 49 SLRTRVSFDIGINKLGGHCLYLD-QQNGALGKRESVADFAANLSCW--ADAIVARVFS--H----STIEQLAEHGS---V 116 (302)
T ss_pred CchHHHHHHHHHHHcCCcEEECC-CCcCcCCCCcCHHHHHHHHHHh--CCEEEEeCCC--h----hHHHHHHHhCC---C
Confidence 43333466789999999988764 2221 235677777777764 8899988653 2 22333322222 3
Q ss_pred ccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC---------
Q 017184 205 HPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR--------- 275 (375)
Q Consensus 205 ~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~--------- 275 (375)
-.+|.| .+...||=+.+=+--+++...+++|++|+++|-+..|.+.++.+|...|++|++|+-.
T Consensus 117 PVINa~-------~~~~HPtQaL~Dl~Ti~e~~g~l~g~kva~vGD~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~ 189 (302)
T PRK14805 117 PVINAL-------CDLYHPCQALADFLTLAEQFGDVSKVKLAYVGDGNNVTHSLMYGAAILGATMTVICPPGHFPDGQIV 189 (302)
T ss_pred CEEECC-------CCCCChHHHHHHHHHHHHHhCCcCCcEEEEEcCCCccHHHHHHHHHHcCCEEEEECCchhcCCHHHH
Confidence 455642 2246799888744444444347999999999998889999999999999999999632
Q ss_pred ----------------CCCHHhhccCCcEEEEcc
Q 017184 276 ----------------TKNPEEITRQADIIISAV 293 (375)
Q Consensus 276 ----------------t~~L~~~l~~ADIVIsAv 293 (375)
+.++ +.++.||+|.+-+
T Consensus 190 ~~a~~~~~~~g~~~~~~~d~-~a~~~aDvvy~~~ 222 (302)
T PRK14805 190 AEAQELAAKSGGKLVLTSDI-EAIEGHDAIYTDT 222 (302)
T ss_pred HHHHHHHHHcCCEEEEEcCH-HHHCCCCEEEeec
Confidence 1233 4588999988743
No 177
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=96.14 E-value=0.0092 Score=58.05 Aligned_cols=74 Identities=26% Similarity=0.433 Sum_probs=55.9
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC----------------------------CCHHhhccCCcEEEEccC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------------------KNPEEITRQADIIISAVG 294 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t----------------------------~~L~~~l~~ADIVIsAvG 294 (375)
++|.|||.|.+ |.+++..|++.|.+|+++++.. .+..+.++++|+||.++.
T Consensus 2 mkI~iiG~G~m-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (325)
T PRK00094 2 MKIAVLGAGSW-GTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVP 80 (325)
T ss_pred CEEEEECCCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCC
Confidence 37999999885 9999999999999999987641 134456789999999998
Q ss_pred CCCc---cc--CCCcCCCcEEEEe--eecC
Q 017184 295 QPNM---VR--GSWIKPGAVIIDV--GINP 317 (375)
Q Consensus 295 ~p~~---I~--~~~vk~gavVIDv--gin~ 317 (375)
.... +. ..+++++.+|||+ |+.+
T Consensus 81 ~~~~~~v~~~l~~~~~~~~~vi~~~ngv~~ 110 (325)
T PRK00094 81 SQALREVLKQLKPLLPPDAPIVWATKGIEP 110 (325)
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEEeecccC
Confidence 6431 11 1356788999999 5544
No 178
>PLN02688 pyrroline-5-carboxylate reductase
Probab=96.14 E-value=0.011 Score=56.41 Aligned_cols=68 Identities=24% Similarity=0.386 Sum_probs=50.1
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCC----eEEEE-cCCC--------------CCHHhhccCCcEEEEccCCCCccc----
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDA----TVSIV-HSRT--------------KNPEEITRQADIIISAVGQPNMVR---- 300 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gA----tVtv~-hs~t--------------~~L~~~l~~ADIVIsAvG~p~~I~---- 300 (375)
++.+||.|.+ |.+++..|++.|. +|+++ +++. .+..+.++++|+||.++ .|..+.
T Consensus 2 kI~~IG~G~m-G~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~~~~~e~~~~aDvVil~v-~~~~~~~vl~ 79 (266)
T PLN02688 2 RVGFIGAGKM-AEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTAASNTEVVKSSDVIILAV-KPQVVKDVLT 79 (266)
T ss_pred eEEEECCcHH-HHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEeCChHHHHhcCCEEEEEE-CcHHHHHHHH
Confidence 5899999886 9999999999887 88888 6542 24556778999999999 454221
Q ss_pred --CCCcCCCcEEEEe
Q 017184 301 --GSWIKPGAVIIDV 313 (375)
Q Consensus 301 --~~~vk~gavVIDv 313 (375)
...++++.+||.+
T Consensus 80 ~l~~~~~~~~~iIs~ 94 (266)
T PLN02688 80 ELRPLLSKDKLLVSV 94 (266)
T ss_pred HHHhhcCCCCEEEEe
Confidence 1245677777765
No 179
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=96.13 E-value=0.01 Score=59.69 Aligned_cols=71 Identities=25% Similarity=0.315 Sum_probs=54.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------CCHHhhccCCcEEEEccCCCC---cccC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN---MVRG 301 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------~~L~~~l~~ADIVIsAvG~p~---~I~~ 301 (375)
.++||+|.|||.|.+ |++++..|...|.+|++..+.. .+..+.+++||+|+.+++... ++..
T Consensus 14 ~L~gktIgIIG~Gsm-G~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaVPd~~~~~V~~~ 92 (330)
T PRK05479 14 LIKGKKVAIIGYGSQ-GHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILLPDEVQAEVYEE 92 (330)
T ss_pred hhCCCEEEEEeeHHH-HHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcCCHHHHHHHHHH
Confidence 368999999999986 9999999999999988875531 256678899999999998432 2211
Q ss_pred ---CCcCCCcEE
Q 017184 302 ---SWIKPGAVI 310 (375)
Q Consensus 302 ---~~vk~gavV 310 (375)
..+++|++|
T Consensus 93 ~I~~~Lk~g~iL 104 (330)
T PRK05479 93 EIEPNLKEGAAL 104 (330)
T ss_pred HHHhcCCCCCEE
Confidence 346778766
No 180
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.13 E-value=0.012 Score=57.51 Aligned_cols=72 Identities=21% Similarity=0.296 Sum_probs=54.4
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------CCHHhhccC---CcEEEEccCCCCc----cc--
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQ---ADIIISAVGQPNM----VR-- 300 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------~~L~~~l~~---ADIVIsAvG~p~~----I~-- 300 (375)
+|.|||.|.+ |.+++..|++.|.+|++++++. .+..+..+. +|+||++++.... +.
T Consensus 2 ~Ig~IGlG~M-G~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~~~~~~v~~~l 80 (301)
T PRK09599 2 QLGMIGLGRM-GGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAGEITDATIDEL 80 (301)
T ss_pred EEEEEcccHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCCcHHHHHHHHH
Confidence 6899999986 9999999999999999998762 244455554 6999999886532 11
Q ss_pred CCCcCCCcEEEEeeec
Q 017184 301 GSWIKPGAVIIDVGIN 316 (375)
Q Consensus 301 ~~~vk~gavVIDvgin 316 (375)
.+.+++|.++||.+..
T Consensus 81 ~~~l~~g~ivid~st~ 96 (301)
T PRK09599 81 APLLSPGDIVIDGGNS 96 (301)
T ss_pred HhhCCCCCEEEeCCCC
Confidence 1356788899998654
No 181
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.12 E-value=0.011 Score=60.46 Aligned_cols=37 Identities=27% Similarity=0.534 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
+++||+|+|+|.|. +|+++|..|+++|++|+++.+..
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~ 38 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKE 38 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCc
Confidence 47899999999999 59999999999999999998763
No 182
>PRK08507 prephenate dehydrogenase; Validated
Probab=96.09 E-value=0.013 Score=56.51 Aligned_cols=70 Identities=24% Similarity=0.321 Sum_probs=52.0
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCC--eEEEEcCCC---------------CCHHhhccCCcEEEEccCCCCc---cc--C
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT---------------KNPEEITRQADIIISAVGQPNM---VR--G 301 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gA--tVtv~hs~t---------------~~L~~~l~~ADIVIsAvG~p~~---I~--~ 301 (375)
++.|||.|.+ |.+++..|.+.|. +|++++++. .+..+. .++|+||.+++.... +. .
T Consensus 2 ~I~iIG~G~m-G~sla~~l~~~g~~~~v~~~d~~~~~~~~~~~~g~~~~~~~~~~~-~~aD~Vilavp~~~~~~~~~~l~ 79 (275)
T PRK08507 2 KIGIIGLGLM-GGSLGLALKEKGLISKVYGYDHNELHLKKALELGLVDEIVSFEEL-KKCDVIFLAIPVDAIIEILPKLL 79 (275)
T ss_pred EEEEEccCHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHCCCCcccCCHHHH-hcCCEEEEeCcHHHHHHHHHHHh
Confidence 6899999885 9999999998885 688777642 234443 459999999985432 21 1
Q ss_pred CCcCCCcEEEEeeec
Q 017184 302 SWIKPGAVIIDVGIN 316 (375)
Q Consensus 302 ~~vk~gavVIDvgin 316 (375)
. ++++.+|+|+|..
T Consensus 80 ~-l~~~~iv~d~gs~ 93 (275)
T PRK08507 80 D-IKENTTIIDLGST 93 (275)
T ss_pred c-cCCCCEEEECccc
Confidence 2 7889999999864
No 183
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=96.08 E-value=0.15 Score=50.74 Aligned_cols=150 Identities=13% Similarity=0.215 Sum_probs=98.2
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCC--CCCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccc
Q 017184 128 SATYVRNKKKACQSVGINSFEVHLPE--DTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 205 (375)
Q Consensus 128 S~~Yv~~k~k~a~~~GI~~~~~~l~~--~vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~ 205 (375)
|..=--+=..++.++|-++.++.-.+ -...|-+.+.++-|+.- ++|+|.+-.|-. ..+..+...- .+-
T Consensus 56 STRTR~SFe~A~~~LGg~~i~l~~~~~~~~kgEs~~Dta~vls~y-~~D~iv~R~~~~------~~~~~~a~~~---~vP 125 (305)
T PRK00856 56 STRTRLSFELAAKRLGADVINFSASTSSVSKGETLADTIRTLSAM-GADAIVIRHPQS------GAARLLAESS---DVP 125 (305)
T ss_pred CcchHHHHHHHHHHcCCcEEEeCCCcccCCCCcCHHHHHHHHHhc-CCCEEEEeCCCh------HHHHHHHHHC---CCC
Confidence 54444466788999999987664221 01124456666666542 378888886532 2223332211 234
Q ss_pred cchhhhcccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC--cccHHHHHHHHhhCCCeEEEEcCC-------
Q 017184 206 PLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS--NIVGMPAALLLQREDATVSIVHSR------- 275 (375)
Q Consensus 206 ~~N~G~l~~g~~~~~~~PcT~~g-vi~lL~~~~i~l~GK~vvVIGrs--~~VGkpla~lL~~~gAtVtv~hs~------- 275 (375)
.+|.|- .+...||=+.+ ++.+.++.| +++|++|++||-+ +-|.+.++.++...|++|++|+-.
T Consensus 126 VINa~~------g~~~HPtQ~LaDl~Ti~e~~G-~l~g~kv~~vGD~~~~~v~~Sl~~~~~~~g~~~~~~~P~~~~~~~~ 198 (305)
T PRK00856 126 VINAGD------GSHQHPTQALLDLLTIREEFG-RLEGLKVAIVGDIKHSRVARSNIQALTRLGAEVRLIAPPTLLPEGM 198 (305)
T ss_pred EEECCC------CCCCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEECCcccCcccc
Confidence 455421 13467998887 455555555 6999999999885 446999999999999999999632
Q ss_pred -----CCCHHhhccCCcEEEEccC
Q 017184 276 -----TKNPEEITRQADIIISAVG 294 (375)
Q Consensus 276 -----t~~L~~~l~~ADIVIsAvG 294 (375)
+.|+.+.++.||+|.+...
T Consensus 199 ~~~~~~~d~~ea~~~aDvvyt~~~ 222 (305)
T PRK00856 199 PEYGVHTDLDEVIEDADVVMMLRV 222 (305)
T ss_pred cceEEECCHHHHhCCCCEEEECCc
Confidence 3567899999999998653
No 184
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.07 E-value=0.0082 Score=52.43 Aligned_cols=72 Identities=29% Similarity=0.396 Sum_probs=48.0
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC----------------CCHHhhccCCcEEEEccCCCCc------c
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------KNPEEITRQADIIISAVGQPNM------V 299 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t----------------~~L~~~l~~ADIVIsAvG~p~~------I 299 (375)
--+|.|||+|+ ||..|+..|.+.|..|.-+.+++ .++.+.+++||++|-+++--.+ +
T Consensus 10 ~l~I~iIGaGr-VG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDdaI~~va~~L 88 (127)
T PF10727_consen 10 RLKIGIIGAGR-VGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDDAIAEVAEQL 88 (127)
T ss_dssp --EEEEECTSC-CCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CCHHHHHHHHH
T ss_pred ccEEEEECCCH-HHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechHHHHHHHHHH
Confidence 34899999999 59999999999999988876553 2456789999999999985321 2
Q ss_pred -cCCCcCCCcEEEEee
Q 017184 300 -RGSWIKPGAVIIDVG 314 (375)
Q Consensus 300 -~~~~vk~gavVIDvg 314 (375)
....+++|.+|+=+.
T Consensus 89 a~~~~~~~g~iVvHtS 104 (127)
T PF10727_consen 89 AQYGAWRPGQIVVHTS 104 (127)
T ss_dssp HCC--S-TT-EEEES-
T ss_pred HHhccCCCCcEEEECC
Confidence 223467888887764
No 185
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.06 E-value=0.012 Score=57.17 Aligned_cols=72 Identities=17% Similarity=0.271 Sum_probs=53.9
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC--------------------------------------CCCHHhhcc
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR--------------------------------------TKNPEEITR 284 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~--------------------------------------t~~L~~~l~ 284 (375)
++|.|||.|.+ |.++|..|++.|.+|++++++ +.++++.++
T Consensus 2 ~~V~VIG~G~m-G~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 80 (288)
T PRK09260 2 EKLVVVGAGVM-GRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA 80 (288)
T ss_pred cEEEEECccHH-HHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence 57999999875 999999999999999998654 234557789
Q ss_pred CCcEEEEccCCCCccc-------CCCcCCCcEE-EEeee
Q 017184 285 QADIIISAVGQPNMVR-------GSWIKPGAVI-IDVGI 315 (375)
Q Consensus 285 ~ADIVIsAvG~p~~I~-------~~~vk~gavV-IDvgi 315 (375)
+||+||.+++...-++ .+.+++++++ +|...
T Consensus 81 ~aD~Vi~avpe~~~~k~~~~~~l~~~~~~~~il~~~tSt 119 (288)
T PRK09260 81 DADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTST 119 (288)
T ss_pred CCCEEEEeccCCHHHHHHHHHHHHhhCCCCcEEEEcCCC
Confidence 9999999998653111 1356777755 56554
No 186
>PRK00779 ornithine carbamoyltransferase; Provisional
Probab=96.04 E-value=0.14 Score=50.87 Aligned_cols=148 Identities=14% Similarity=0.137 Sum_probs=98.1
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCCC--CCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017184 127 DSATYVRNKKKACQSVGINSFEVHLPED--TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 204 (375)
Q Consensus 127 aS~~Yv~~k~k~a~~~GI~~~~~~l~~~--vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl 204 (375)
.|..=--+=..++.++|.++.++.-... ...|.+.+.++-|+.- +|+|.+-.|-. ..++.+... -++
T Consensus 53 ~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~~l~~~--~D~iv~R~~~~------~~~~~~a~~---~~v 121 (304)
T PRK00779 53 PSTRTRVSFEVGMAQLGGHAIFLSPRDTQLGRGEPIEDTARVLSRY--VDAIMIRTFEH------ETLEELAEY---STV 121 (304)
T ss_pred CCchHHHHHHHHHHHcCCcEEEECcccccCCCCcCHHHHHHHHHHh--CCEEEEcCCCh------hHHHHHHHh---CCC
Confidence 3444444667899999999887643210 1135577777777764 77888776522 223333221 124
Q ss_pred ccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC---------
Q 017184 205 HPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR--------- 275 (375)
Q Consensus 205 ~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~--------- 275 (375)
-.+|.|. ....||=+.+=+--+++...+++|++++++|-.+-|.+.++.+|...|++|++|+-.
T Consensus 122 PVINag~-------~~~HPtQaL~Dl~Ti~e~~g~l~gl~i~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~ 194 (304)
T PRK00779 122 PVINGLT-------DLSHPCQILADLLTIYEHRGSLKGLKVAWVGDGNNVANSLLLAAALLGFDLRVATPKGYEPDPEIV 194 (304)
T ss_pred CEEeCCC-------CCCChHHHHHHHHHHHHHhCCcCCcEEEEEeCCCccHHHHHHHHHHcCCEEEEECCcccCCCHHHH
Confidence 4567541 235688777644444333346999999999995667999999999999999998632
Q ss_pred -------------CCCHHhhccCCcEEEEc
Q 017184 276 -------------TKNPEEITRQADIIISA 292 (375)
Q Consensus 276 -------------t~~L~~~l~~ADIVIsA 292 (375)
+.|+++.++.||+|.+-
T Consensus 195 ~~~~~~~g~~~~~~~d~~~a~~~aDvvy~~ 224 (304)
T PRK00779 195 EKIAKETGASIEVTHDPKEAVKGADVVYTD 224 (304)
T ss_pred HHHHHHcCCeEEEEcCHHHHhCCCCEEEec
Confidence 24678889999999975
No 187
>PRK07589 ornithine cyclodeaminase; Validated
Probab=96.02 E-value=0.016 Score=58.68 Aligned_cols=74 Identities=19% Similarity=0.293 Sum_probs=52.4
Q ss_pred CCEEEEEcCCcccHHHHHHHHhh-CC-CeEEEEcCC--------------------CCCHHhhccCCcEEEEccCCCC--
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSR--------------------TKNPEEITRQADIIISAVGQPN-- 297 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~-~g-AtVtv~hs~--------------------t~~L~~~l~~ADIVIsAvG~p~-- 297 (375)
-+++.|||.|.- ++.-+..+.. +. -+|++.+++ ..++++.+++||||+++|+...
T Consensus 129 a~~l~iiGaG~Q-A~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIIvtaT~S~~~~ 207 (346)
T PRK07589 129 SRTMALIGNGAQ-SEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIVACRSVAEAVEGADIITTVTADKTNA 207 (346)
T ss_pred CcEEEEECCcHH-HHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCCC
Confidence 466777777764 6554433332 22 356666554 1357789999999999998643
Q ss_pred -cccCCCcCCCcEEEEeeec
Q 017184 298 -MVRGSWIKPGAVIIDVGIN 316 (375)
Q Consensus 298 -~I~~~~vk~gavVIDvgin 316 (375)
+++.+|+|+|+.|.=+|.+
T Consensus 208 Pvl~~~~lkpG~hV~aIGs~ 227 (346)
T PRK07589 208 TILTDDMVEPGMHINAVGGD 227 (346)
T ss_pred ceecHHHcCCCcEEEecCCC
Confidence 5899999999999999854
No 188
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=96.01 E-value=0.014 Score=57.52 Aligned_cols=53 Identities=23% Similarity=0.430 Sum_probs=42.2
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCC--CeEEEEcCCCC------------------------CHHhhccCCcEEEEccCCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQRED--ATVSIVHSRTK------------------------NPEEITRQADIIISAVGQP 296 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~g--AtVtv~hs~t~------------------------~L~~~l~~ADIVIsAvG~p 296 (375)
++|+|||.|+ ||..++..|+.+| .+|++++++.. .-.+.+++||+||.++|.|
T Consensus 1 ~kI~IIGaG~-vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIitag~~ 79 (306)
T cd05291 1 RKVVIIGAGH-VGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVITAGAP 79 (306)
T ss_pred CEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEEccCCC
Confidence 4799999988 5999999999998 37999876421 1124578999999999976
No 189
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=95.98 E-value=0.021 Score=55.54 Aligned_cols=55 Identities=29% Similarity=0.289 Sum_probs=45.4
Q ss_pred ccccCCHHHHHH----HHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEE-EEcCC
Q 017184 220 LFIPCTPKGCIE----LLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVS-IVHSR 275 (375)
Q Consensus 220 ~~~PcT~~gvi~----lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVt-v~hs~ 275 (375)
+--+.|.+|++. ++++.+.+++|++|+|-|.|+ ||..++.+|...|+.|+ |++++
T Consensus 12 gR~~aTg~Gv~~~~~~~~~~~~~~l~g~~vaIqGfGn-VG~~~a~~L~e~GakvvaVsD~~ 71 (254)
T cd05313 12 IRPEATGYGLVYFVEEMLKDRNETLKGKRVAISGSGN-VAQYAAEKLLELGAKVVTLSDSK 71 (254)
T ss_pred CCCchhHHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECCC
Confidence 445789888754 455678999999999999999 59999999999999877 77643
No 190
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=95.96 E-value=0.018 Score=58.93 Aligned_cols=72 Identities=29% Similarity=0.399 Sum_probs=54.5
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC----------------------------------CCHHhhccCCcEE
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------------------------KNPEEITRQADII 289 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t----------------------------------~~L~~~l~~ADIV 289 (375)
+|.|||.|.+ |.++|..|++.|.+|++++++. .++.+.++++|+|
T Consensus 2 kI~vIGlG~~-G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~advv 80 (411)
T TIGR03026 2 KIAVIGLGYV-GLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADVI 80 (411)
T ss_pred EEEEECCCch-hHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCEE
Confidence 6899999885 9999999999999999987642 1234557889999
Q ss_pred EEccCCCCc---------cc------CCCcCCCcEEEEeeec
Q 017184 290 ISAVGQPNM---------VR------GSWIKPGAVIIDVGIN 316 (375)
Q Consensus 290 IsAvG~p~~---------I~------~~~vk~gavVIDvgin 316 (375)
|.+++.|.- +. ...+++|.+|||.+.-
T Consensus 81 ii~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~STv 122 (411)
T TIGR03026 81 IICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLESTV 122 (411)
T ss_pred EEEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCcC
Confidence 999997731 11 1245788899987743
No 191
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.94 E-value=0.017 Score=59.09 Aligned_cols=123 Identities=18% Similarity=0.263 Sum_probs=68.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCC---HHhhccCCcEEEEccCCCCcccCCCcC--CCcEEEEe
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---PEEITRQADIIISAVGQPNMVRGSWIK--PGAVIIDV 313 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~---L~~~l~~ADIVIsAvG~p~~I~~~~vk--~gavVIDv 313 (375)
+++||+++|+|.|+ .|++++..|+++|++|+++.++... ..+.++...+-+. .|. ...+.+. ...+|+--
T Consensus 2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~-~~~---~~~~~~~~~~d~vV~s~ 76 (447)
T PRK02472 2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVI-CGS---HPLELLDEDFDLMVKNP 76 (447)
T ss_pred CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEE-eCC---CCHHHhcCcCCEEEECC
Confidence 36899999999999 5999999999999999999765321 1122222222111 110 0001111 22344444
Q ss_pred eecCCCCCC----CCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017184 314 GINPVEDAK----SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSA 368 (375)
Q Consensus 314 gin~~~~~~----~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~ 368 (375)
|+++.. +. ...|-+++++.++-..... ..+.-|-|-.|.-|+..|+.++++.+
T Consensus 77 gi~~~~-~~~~~a~~~~i~v~~~~el~~~~~~-~~~I~VTGT~GKTTTt~ll~~iL~~~ 133 (447)
T PRK02472 77 GIPYTN-PMVEKALEKGIPIITEVELAYLISE-APIIGITGSNGKTTTTTLIGEMLKAG 133 (447)
T ss_pred CCCCCC-HHHHHHHHCCCcEEeHHHHHHHhcC-CCEEEEeCCCchHHHHHHHHHHHHHC
Confidence 444321 00 0123356777665221111 11223568899999999999998764
No 192
>TIGR03316 ygeW probable carbamoyltransferase YgeW. Members of this protein family include the ygeW gene product of Escherichia coli. The function is unknown. Members show homology to ornithine carbamoyltransferase (TIGR00658) and aspartate carbamoyltransferase (carbamoyltransferase), and therefore may belong to the carbamoyltransferases in function. Members often are found in a large, conserved genomic region associated with purine catabolism.
Probab=95.93 E-value=0.14 Score=52.10 Aligned_cols=155 Identities=17% Similarity=0.153 Sum_probs=96.8
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCCC---HHHHHHHHHHhhcCCCccEEEEeCCCC---CCCCHHHHHhhCC-cccc
Q 017184 128 SATYVRNKKKACQSVGINSFEVHLPEDTS---EQEVLKHISVFNDDPSVHGILVQLPLP---CHIDEQSILNAVS-MEKD 200 (375)
Q Consensus 128 S~~Yv~~k~k~a~~~GI~~~~~~l~~~vs---~~el~~~I~~LN~D~~V~GIlVqlPLp---~~i~~~~i~~~I~-p~KD 200 (375)
|..---+=..++.++|.++.++.- .+.+ -|-+.+.++-|+.- +|+|.+-.|-. .|-..+.+.+... --||
T Consensus 53 STRTR~SFE~A~~~LGg~~i~l~~-~~s~~~kgEsl~Dtarvls~y--~D~Iv~R~~~~~~~~~~~l~~~a~~~~~~~~~ 129 (357)
T TIGR03316 53 STRTRFSFASAMNLLGLHAQDLDE-GKSQIGHGETVRETAEMISFF--ADGIGIRDDMYIGVGNAYMREVAKYVQEGYKD 129 (357)
T ss_pred CcchHHHHHHHHHHcCCcEEEeCC-ccccCCCCCCHHHHHHHHHHh--CcEEEEeCCCccccccHHHHHHHHhhhhcccc
Confidence 433333557789999999988763 2221 35577777777764 78999987642 2111122222211 0122
Q ss_pred -c--CccccchhhhcccCCCccccccCCHHHH-HHHHHHhCC--CCCCCEEEEEcC-------CcccHHHHHHHHhhCCC
Q 017184 201 -V--DGFHPLNIGRLAMRGREPLFIPCTPKGC-IELLHRYGF--DIKGKRAVVIGR-------SNIVGMPAALLLQREDA 267 (375)
Q Consensus 201 -V--DGl~~~N~G~l~~g~~~~~~~PcT~~gv-i~lL~~~~i--~l~GK~vvVIGr-------s~~VGkpla~lL~~~gA 267 (375)
| -.+-.+|.| .+.+.||=+.+= +.+.++.|. +++|++|+++|. ...|.+.++.++...|+
T Consensus 130 ~~~~s~vPVINa~-------~~~~HPtQaLaDl~Ti~e~~G~~~~l~g~kvai~~~~d~~~gr~~~v~~Sl~~~~~~~G~ 202 (357)
T TIGR03316 130 GVLEQRPPLVNLQ-------CDIDHPTQAMADIMTLQEKFGGIENLKGKKFAMTWAYSPSYGKPLSVPQGIIGLMTRFGM 202 (357)
T ss_pred ccccCCCCEEECC-------CCCCCchHHHHHHHHHHHHhCCccccCCCEEEEEeccccccCccchHHHHHHHHHHHcCC
Confidence 0 012334542 234779988874 555556663 489999999963 33567888888888999
Q ss_pred eEEEEcCC-------------------------CCCHHhhccCCcEEEEc
Q 017184 268 TVSIVHSR-------------------------TKNPEEITRQADIIISA 292 (375)
Q Consensus 268 tVtv~hs~-------------------------t~~L~~~l~~ADIVIsA 292 (375)
+|++++-. +.|+.+.+++||+|.+-
T Consensus 203 ~v~~~~P~~~~~~~~~~~~a~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~ 252 (357)
T TIGR03316 203 DVTLAHPEGYHLLPEVIEVAKKNAAENGGKFNIVNSMDEAFKDADIVYPK 252 (357)
T ss_pred EEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEC
Confidence 99999633 24567888999998866
No 193
>PRK06949 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.012 Score=54.57 Aligned_cols=39 Identities=31% Similarity=0.439 Sum_probs=34.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
++++||+++|.|+++-+|+.++..|.++|++|+++.++.
T Consensus 5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~ 43 (258)
T PRK06949 5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRV 43 (258)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 468899999999988899999999999999999887653
No 194
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.87 E-value=0.014 Score=55.68 Aligned_cols=60 Identities=13% Similarity=0.236 Sum_probs=45.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-CCH-----------------HhhccCCcEEEEccCCCCc
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-KNP-----------------EEITRQADIIISAVGQPNM 298 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-~~L-----------------~~~l~~ADIVIsAvG~p~~ 298 (375)
++++|++|+|||.|.+ +.-=+..|++.||.|||+.-.- +++ .+.+..+++||.||+.+.+
T Consensus 21 l~~~~~~VLVVGGG~V-A~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~r~~~~~dl~g~~LViaATdD~~v 98 (223)
T PRK05562 21 LLSNKIKVLIIGGGKA-AFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIKGNYDKEFIKDKHLIVIATDDEKL 98 (223)
T ss_pred EECCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCcEEEECCCCHHH
Confidence 5667999999999996 7766778888999999985431 111 2446789999999997653
No 195
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=95.81 E-value=0.023 Score=54.07 Aligned_cols=53 Identities=28% Similarity=0.372 Sum_probs=44.2
Q ss_pred cccCCHHHHHHHH----HHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEE-EEcC
Q 017184 221 FIPCTPKGCIELL----HRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVS-IVHS 274 (375)
Q Consensus 221 ~~PcT~~gvi~lL----~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVt-v~hs 274 (375)
..+.|.+|+...+ ++.+.+++|++|+|.|.|+ ||+.++.+|.+.|++|+ ++.+
T Consensus 6 ~~~~Tg~Gv~~~~~~~~~~~~~~l~~~~v~I~G~G~-VG~~~a~~L~~~g~~vv~v~D~ 63 (227)
T cd01076 6 REEATGRGVAYATREALKKLGIGLAGARVAIQGFGN-VGSHAARFLHEAGAKVVAVSDS 63 (227)
T ss_pred CCccchHHHHHHHHHHHHhcCCCccCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECC
Confidence 3478888876554 4567789999999999988 59999999999999887 7766
No 196
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=95.81 E-value=0.01 Score=54.69 Aligned_cols=53 Identities=30% Similarity=0.428 Sum_probs=35.2
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC----------------------------------CCCHHhhccCCcE
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------------------------TKNPEEITRQADI 288 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~----------------------------------t~~L~~~l~~ADI 288 (375)
++|+|||.|.+ |.|+|..|++.|.+|+.+..+ +.+..+.+++||+
T Consensus 1 M~I~ViGlGyv-Gl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv 79 (185)
T PF03721_consen 1 MKIAVIGLGYV-GLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV 79 (185)
T ss_dssp -EEEEE--STT-HHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred CEEEEECCCcc-hHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence 47999999885 999999999999999998643 1344566777888
Q ss_pred EEEccCCC
Q 017184 289 IISAVGQP 296 (375)
Q Consensus 289 VIsAvG~p 296 (375)
+|.++|-|
T Consensus 80 ~~I~VpTP 87 (185)
T PF03721_consen 80 VFICVPTP 87 (185)
T ss_dssp EEE----E
T ss_pred EEEecCCC
Confidence 88877755
No 197
>PRK09414 glutamate dehydrogenase; Provisional
Probab=95.80 E-value=0.061 Score=56.23 Aligned_cols=51 Identities=33% Similarity=0.337 Sum_probs=43.3
Q ss_pred cccCCHHHHH----HHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEE
Q 017184 221 FIPCTPKGCI----ELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV 272 (375)
Q Consensus 221 ~~PcT~~gvi----~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~ 272 (375)
-.+.|..|+. +.+++.+.+++|++|+|.|.|+ ||+.+|.+|...|++|+.+
T Consensus 207 r~~aTg~Gv~~~~~~~~~~~~~~l~g~rVaIqGfGn-VG~~~A~~L~~~GakVVav 261 (445)
T PRK09414 207 RTEATGYGLVYFAEEMLKARGDSFEGKRVVVSGSGN-VAIYAIEKAQQLGAKVVTC 261 (445)
T ss_pred CCCcccHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEE
Confidence 4578988875 4555678999999999999998 5999999999999987766
No 198
>PTZ00317 NADP-dependent malic enzyme; Provisional
Probab=95.79 E-value=0.071 Score=57.05 Aligned_cols=164 Identities=18% Similarity=0.186 Sum_probs=107.9
Q ss_pred HHHHHHHHHc-CCe---EEEEeCCCCCC--------------------------HHHHHHHHHHhhcCCCccEEEEeCCC
Q 017184 133 RNKKKACQSV-GIN---SFEVHLPEDTS--------------------------EQEVLKHISVFNDDPSVHGILVQLPL 182 (375)
Q Consensus 133 ~~k~k~a~~~-GI~---~~~~~l~~~vs--------------------------~~el~~~I~~LN~D~~V~GIlVqlPL 182 (375)
..|...+..+ ||+ +.-+.|+..++ -+|+.++++++- |+ .+||+==
T Consensus 175 ~GKl~Ly~a~aGI~P~~~lPI~LDvGTnN~~LL~DPlYlG~r~~R~~g~eY~~f~defv~av~~~~--P~---~~Iq~ED 249 (559)
T PTZ00317 175 IGKLSLYVAGGGINPSRVLPVVLDVGTNNEKLLNDPLYLGLREKRLDDDEYYELLDEFMEAVSSRW--PN---AVVQFED 249 (559)
T ss_pred ccHHHHHHhhcCCChhhccceEEecCCChhhhccCcccccccCCCCChhhHHHHHHHHHHHHHHhC--CC---eEEehhh
Confidence 4566666666 588 66666654332 356666666665 44 2555422
Q ss_pred CCCCCHHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHH
Q 017184 183 PCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 262 (375)
Q Consensus 183 p~~i~~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL 262 (375)
...-+.-++++... +++-.+ | ++..+---++-.|++..++-.+.+++..++++.|+|.+ |..+|.+|
T Consensus 250 f~~~naf~iL~kyr--~~i~~F---n-------DDiQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsA-giGia~ll 316 (559)
T PTZ00317 250 FSNNHCFDLLERYQ--NKYRCF---N-------DDIQGTGAVIAAGFLNALKLSGVPPEEQRIVFFGAGSA-AIGVANNI 316 (559)
T ss_pred cCCccHHHHHHHhc--cCCCEe---c-------ccchhHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHH
Confidence 22223344444432 122221 1 22334445667889999999999999999999999997 99999888
Q ss_pred hh----CCC-------eEEEEcCC-----------------------------CCCHHhhccCC--cEEEEccCCCCccc
Q 017184 263 QR----EDA-------TVSIVHSR-----------------------------TKNPEEITRQA--DIIISAVGQPNMVR 300 (375)
Q Consensus 263 ~~----~gA-------tVtv~hs~-----------------------------t~~L~~~l~~A--DIVIsAvG~p~~I~ 300 (375)
.. .|. .+++++++ ..+|.+.++.+ |++|-+.+.|+.++
T Consensus 317 ~~~m~~~Gls~eeA~~~i~~vD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~~~~~~L~e~v~~~KPtvLIG~S~~~g~Ft 396 (559)
T PTZ00317 317 ADLAAEYGVTREEALKSFYLVDSKGLVTTTRGDKLAKHKVPFARTDISAEDSSLKTLEDVVRFVKPTALLGLSGVGGVFT 396 (559)
T ss_pred HHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCccccHHHHHHhccccccccccCCCHHHHHhccCCCEEEEecCCCCCCC
Confidence 74 665 68887654 12577888888 99999999899999
Q ss_pred CCCcC------CCcEEEEee
Q 017184 301 GSWIK------PGAVIIDVG 314 (375)
Q Consensus 301 ~~~vk------~gavVIDvg 314 (375)
+++|+ +.-+|+=+.
T Consensus 397 ~evv~~Ma~~~~rPIIFaLS 416 (559)
T PTZ00317 397 EEVVKTMASNVERPIIFPLS 416 (559)
T ss_pred HHHHHHHHhcCCCCEEEECC
Confidence 88875 355666655
No 199
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=95.78 E-value=0.018 Score=57.40 Aligned_cols=55 Identities=29% Similarity=0.389 Sum_probs=44.6
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------CCHHhhccCCcEEEEccCC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQ 295 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------~~L~~~l~~ADIVIsAvG~ 295 (375)
|+||++.|||.|.+ |.+++..|.+.|.+|++..+.. .+..+.+++||+||.+++-
T Consensus 1 l~~kkIgiIG~G~m-G~AiA~~L~~sG~~Viv~~~~~~~~~~~a~~~Gv~~~s~~ea~~~ADiVvLaVpp 69 (314)
T TIGR00465 1 LKGKTVAIIGYGSQ-GHAQALNLRDSGLNVIVGLRKGGASWKKATEDGFKVGTVEEAIPQADLIMNLLPD 69 (314)
T ss_pred CCcCEEEEEeEcHH-HHHHHHHHHHCCCeEEEEECcChhhHHHHHHCCCEECCHHHHHhcCCEEEEeCCc
Confidence 58999999999996 9999999999998877653321 1355678999999999984
No 200
>PRK06398 aldose dehydrogenase; Validated
Probab=95.75 E-value=0.023 Score=53.51 Aligned_cols=57 Identities=23% Similarity=0.277 Sum_probs=44.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC----------------CHHh-------hccCCcEEEEccCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------------NPEE-------ITRQADIIISAVGQ 295 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~----------------~L~~-------~l~~ADIVIsAvG~ 295 (375)
+++||+++|.|+++-+|+.++..|+++|++|++..++.. ++++ ....-|+||+.+|.
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~ 82 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGI 82 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 578999999999988999999999999999998765421 1111 22357999998885
No 201
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.019 Score=52.93 Aligned_cols=37 Identities=30% Similarity=0.466 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||+++|.|+++.+|+.++..|+++|++|+++.|+
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~ 38 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRD 38 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCC
Confidence 4789999999999999999999999999999888665
No 202
>PRK07200 aspartate/ornithine carbamoyltransferase family protein; Validated
Probab=95.70 E-value=0.3 Score=50.46 Aligned_cols=167 Identities=17% Similarity=0.207 Sum_probs=103.2
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCC--CCHHHHHHHHHHhhcCCCccEEEEeCCC---CCCCCHHH
Q 017184 116 GLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPED--TSEQEVLKHISVFNDDPSVHGILVQLPL---PCHIDEQS 190 (375)
Q Consensus 116 ~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~--vs~~el~~~I~~LN~D~~V~GIlVqlPL---p~~i~~~~ 190 (375)
++++.++-+ .|..=--+=..++.++|-++.++.-.+. ..-|-+.+.++-|+.- +|+|.+-.|- ..+-..+.
T Consensus 60 ~~~~~lF~e--pSTRTR~SFE~A~~~LGg~~i~l~~~~ss~~kGEsl~DTarvLs~y--~D~IviR~~~~~g~~~~~~~e 135 (395)
T PRK07200 60 GLGISVFRD--NSTRTRFSYASACNLLGLEVQDLDEGKSQIAHGETVRETANMISFM--ADVIGIRDDMYIGKGNAYMRE 135 (395)
T ss_pred CeEEEEEcC--CCchhHHHHHHHHHHcCCCEEEcCCccccCCCCCCHHHHHHHHHHh--CCEEEEecCcccccccHHHHH
Confidence 344434443 3443334567889999999887743210 1125577777777764 8899998774 22211222
Q ss_pred HHhhCCc--cccc-Cccc-cchhhhcccCCCccccccCCHHH-HHHHHHHhCC--CCCCCEEEEEc-------CCcccHH
Q 017184 191 ILNAVSM--EKDV-DGFH-PLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGF--DIKGKRAVVIG-------RSNIVGM 256 (375)
Q Consensus 191 i~~~I~p--~KDV-DGl~-~~N~G~l~~g~~~~~~~PcT~~g-vi~lL~~~~i--~l~GK~vvVIG-------rs~~VGk 256 (375)
+.+...- .++| -..- .+|.+ .+...||=+.+ ++.+.++.|- .++|++|+++| ++..|.+
T Consensus 136 la~~~~~~~~~~~~~~~pPVINa~-------~~~~HPtQaLaDl~TI~E~~G~~~~l~g~kVaivg~~~~~~g~~~~Va~ 208 (395)
T PRK07200 136 VGAAVDDGYKQGVLPQRPTLVNLQ-------CDIDHPTQSMADLLHLIEHFGGLENLKGKKIAMTWAYSPSYGKPLSVPQ 208 (395)
T ss_pred HHHHhhhhcccccccCCCeEEECC-------CCCCCcHHHHHHHHHHHHHhCCCcccCCCEEEEEeccccccCCcchHHH
Confidence 2222110 0111 1222 25642 23567998777 4556566663 38999999985 4456789
Q ss_pred HHHHHHhhCCCeEEEEcCC-------------------------CCCHHhhccCCcEEEEcc
Q 017184 257 PAALLLQREDATVSIVHSR-------------------------TKNPEEITRQADIIISAV 293 (375)
Q Consensus 257 pla~lL~~~gAtVtv~hs~-------------------------t~~L~~~l~~ADIVIsAv 293 (375)
.++.+|...|++|++++-. +.|+++.++.||+|.+-+
T Consensus 209 Sl~~~~~~lG~~v~~~~P~~~~~~~~i~~~a~~~~~~~G~~i~~~~d~~eav~~aDvVYtd~ 270 (395)
T PRK07200 209 GIIGLMTRFGMDVTLAHPEGYDLMPEVVEVAKKNAKASGGSFRQVNSMEEAFKDADIVYPKS 270 (395)
T ss_pred HHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcC
Confidence 9999999999999998633 246778999999999753
No 203
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=95.69 E-value=0.023 Score=58.70 Aligned_cols=120 Identities=23% Similarity=0.183 Sum_probs=73.8
Q ss_pred CCCCEEEEEcCCcccHHH-HHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCc-CCCcEEEEeeecC
Q 017184 240 IKGKRAVVIGRSNIVGMP-AALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWI-KPGAVIIDVGINP 317 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkp-la~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~v-k~gavVIDvgin~ 317 (375)
.++|++.|+|.|+. |+. +|.+|.++|++|++.+.+.....+.+++..+.+.. |.+ .+.+ ....+|+--|+++
T Consensus 5 ~~~~~v~viG~G~s-G~s~~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~-~~~----~~~~~~~d~vv~spgi~~ 78 (461)
T PRK00421 5 RRIKRIHFVGIGGI-GMSGLAEVLLNLGYKVSGSDLKESAVTQRLLELGAIIFI-GHD----AENIKDADVVVYSSAIPD 78 (461)
T ss_pred CCCCEEEEEEEchh-hHHHHHHHHHhCCCeEEEECCCCChHHHHHHHCCCEEeC-CCC----HHHCCCCCEEEECCCCCC
Confidence 47899999999998 999 79999999999999987643222224333443322 221 1122 1245555555554
Q ss_pred CCCCC---CCCCceeecccchhh-hhh--hcceeccCCCCccHHHHHHHHHHHHHHH
Q 017184 318 VEDAK---SPRGYRLVGDVCYEE-ACE--VASAITPVPGGVGPMTIAMLLSNTLTSA 368 (375)
Q Consensus 318 ~~~~~---~~~g~kl~GDVd~~~-v~~--~a~~iTPVPGGVGp~T~amLl~N~v~a~ 368 (375)
....- ...|-+++++.++-. ..+ ..-+ |-|=-|.-|+..|+.++++.+
T Consensus 79 ~~~~~~~a~~~~i~i~~~~e~~~~~~~~~~~I~---ITGTnGKTTTt~ll~~iL~~~ 132 (461)
T PRK00421 79 DNPELVAARELGIPVVRRAEMLAELMRFRTSIA---VAGTHGKTTTTSLLAHVLAEA 132 (461)
T ss_pred CCHHHHHHHHCCCcEEeHHHHHHHHHccCcEEE---EECCCCHHHHHHHHHHHHHhc
Confidence 21000 012336788877632 211 2233 447788999999999999765
No 204
>PTZ00117 malate dehydrogenase; Provisional
Probab=95.68 E-value=0.032 Score=55.55 Aligned_cols=56 Identities=25% Similarity=0.446 Sum_probs=44.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCC-CeEEEEcCC--------------------------CCCHHhhccCCcEEEEc
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSR--------------------------TKNPEEITRQADIIISA 292 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~g-AtVtv~hs~--------------------------t~~L~~~l~~ADIVIsA 292 (375)
++.++|+|||+|. ||..++.+|+..| +++.+++.+ +.+++ .+++||+||.+
T Consensus 3 ~~~~KI~IIGaG~-vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVit 80 (319)
T PTZ00117 3 VKRKKISMIGAGQ-IGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVIT 80 (319)
T ss_pred CCCcEEEEECCCH-HHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEEC
Confidence 4678999999976 5999999999888 788777542 13444 77999999999
Q ss_pred cCCCC
Q 017184 293 VGQPN 297 (375)
Q Consensus 293 vG~p~ 297 (375)
+|.|.
T Consensus 81 ag~~~ 85 (319)
T PTZ00117 81 AGVQR 85 (319)
T ss_pred CCCCC
Confidence 98643
No 205
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.022 Score=54.08 Aligned_cols=57 Identities=19% Similarity=0.248 Sum_probs=44.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-C---------------------CHHhhccCCcEEEEccCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-K---------------------NPEEITRQADIIISAVGQ 295 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-~---------------------~L~~~l~~ADIVIsAvG~ 295 (375)
.++||+++|.|+|+-+|+.++..|+++|++|+++.++. . ++.+...+-|++|+.+|.
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 46899999999988889999999999999998876543 1 122345567888887774
No 206
>PLN02712 arogenate dehydrogenase
Probab=95.64 E-value=0.018 Score=62.89 Aligned_cols=76 Identities=20% Similarity=0.268 Sum_probs=56.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-------------CCHHhhc-cCCcEEEEccCCCC---ccc-
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEIT-RQADIIISAVGQPN---MVR- 300 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-------------~~L~~~l-~~ADIVIsAvG~p~---~I~- 300 (375)
+-+.+++.|||.|.+ |..++..|.+.|.+|++++++. .++.+.+ ++||+||.+++... ++.
T Consensus 49 ~~~~~kIgIIG~G~m-G~slA~~L~~~G~~V~~~dr~~~~~~A~~~Gv~~~~d~~e~~~~~aDvViLavP~~~~~~vl~~ 127 (667)
T PLN02712 49 NTTQLKIAIIGFGNY-GQFLAKTLISQGHTVLAHSRSDHSLAARSLGVSFFLDPHDLCERHPDVILLCTSIISTENVLKS 127 (667)
T ss_pred cCCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHcCCEEeCCHHHHhhcCCCEEEEcCCHHHHHHHHHh
Confidence 345578999999885 9999999999999998887652 2344434 56999999998422 222
Q ss_pred --CCCcCCCcEEEEeee
Q 017184 301 --GSWIKPGAVIIDVGI 315 (375)
Q Consensus 301 --~~~vk~gavVIDvgi 315 (375)
...+++|++|+|++.
T Consensus 128 l~~~~l~~g~iVvDv~S 144 (667)
T PLN02712 128 LPLQRLKRNTLFVDVLS 144 (667)
T ss_pred hhhhcCCCCeEEEECCC
Confidence 235788999999973
No 207
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.62 E-value=0.027 Score=51.61 Aligned_cols=57 Identities=21% Similarity=0.316 Sum_probs=44.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC------------CH----H---hhccCCcEEEEccCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------NP----E---EITRQADIIISAVGQ 295 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~------------~L----~---~~l~~ADIVIsAvG~ 295 (375)
+++||+++|.|+++-+|+.++..|+++|++|+++.++.. |+ + +.....|+||..+|.
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~ 77 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGI 77 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCC
Confidence 478999999999998999999999999999998876421 11 1 123457899988874
No 208
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=95.62 E-value=0.0073 Score=51.32 Aligned_cols=74 Identities=22% Similarity=0.297 Sum_probs=49.6
Q ss_pred EEEEEcCCcccHHHHHHHHhhCC-CeE-EEEcCCC---CCH-------------------HhhccCCcEEEEccCCC--C
Q 017184 244 RAVVIGRSNIVGMPAALLLQRED-ATV-SIVHSRT---KNP-------------------EEITRQADIIISAVGQP--N 297 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~g-AtV-tv~hs~t---~~L-------------------~~~l~~ADIVIsAvG~p--~ 297 (375)
||.|||+.|.+|+-+..+|.++- +++ .++.++. +.+ .+.+.++|+||.|++.- .
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~~~ 80 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGASK 80 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHHHH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhHHH
Confidence 68999988888999999999854 453 3343332 111 13458999999998842 1
Q ss_pred cccCCCcCCCcEEEEeeecC
Q 017184 298 MVRGSWIKPGAVIIDVGINP 317 (375)
Q Consensus 298 ~I~~~~vk~gavVIDvgin~ 317 (375)
-+-+..+++|..|||.+-..
T Consensus 81 ~~~~~~~~~g~~ViD~s~~~ 100 (121)
T PF01118_consen 81 ELAPKLLKAGIKVIDLSGDF 100 (121)
T ss_dssp HHHHHHHHTTSEEEESSSTT
T ss_pred HHHHHHhhCCcEEEeCCHHH
Confidence 12233478899999998554
No 209
>PRK14030 glutamate dehydrogenase; Provisional
Probab=95.62 E-value=0.086 Score=55.14 Aligned_cols=50 Identities=32% Similarity=0.335 Sum_probs=42.8
Q ss_pred cccCCHHHHH----HHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEE
Q 017184 221 FIPCTPKGCI----ELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSI 271 (375)
Q Consensus 221 ~~PcT~~gvi----~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv 271 (375)
-.+.|.+|++ +++++.+.+++||+|+|=|.|+ ||..+|..|.+.||+|+.
T Consensus 203 r~~ATg~Gv~~~~~~~~~~~g~~l~g~~vaIQGfGn-VG~~aA~~L~e~GakvVa 256 (445)
T PRK14030 203 RPEATGFGALYFVHQMLETKGIDIKGKTVAISGFGN-VAWGAATKATELGAKVVT 256 (445)
T ss_pred CCCccHHHHHHHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEE
Confidence 3467999875 5556778999999999999988 599999999999998776
No 210
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.018 Score=53.96 Aligned_cols=38 Identities=29% Similarity=0.377 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
+++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~ 39 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNA 39 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCH
Confidence 46899999999988899999999999999999987653
No 211
>PRK08192 aspartate carbamoyltransferase; Provisional
Probab=95.59 E-value=0.2 Score=50.59 Aligned_cols=144 Identities=15% Similarity=0.081 Sum_probs=91.8
Q ss_pred HHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccchhh
Q 017184 134 NKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIG 210 (375)
Q Consensus 134 ~k~k~a~~~GI~~~~~~l~~~v---s~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~G 210 (375)
+=..++.++|.++.++.=+.+. ..|-+.+.++-|+.- +|+|.+-.|-.. ....+.+.. . +-.+|.|
T Consensus 61 SFe~A~~~LGg~~i~~~~~~~s~~~kgEsl~Dtarvls~y--~D~IviR~~~~~--~~~~~a~~~----~---vPVINa~ 129 (338)
T PRK08192 61 SFGCAFNLLGGHVRETTGMASSSLSKGESLYDTARVLSTY--SDVIAMRHPDAG--SVKEFAEGS----R---VPVINGG 129 (338)
T ss_pred HHHHHHHHcCCcEEeecCcccccCCCCCCHHHHHHHHHHc--CCEEEEeCCchh--HHHHHHHhC----C---CCEEECC
Confidence 5577899999998764211221 235577777777764 789998865322 222222221 1 3345542
Q ss_pred hcccCCCccccccCCHHHH-HHHHHHh---CCCCCCCEEEEEcCC--cccHHHHHHHHhhC-CCeEEEEcCC--------
Q 017184 211 RLAMRGREPLFIPCTPKGC-IELLHRY---GFDIKGKRAVVIGRS--NIVGMPAALLLQRE-DATVSIVHSR-------- 275 (375)
Q Consensus 211 ~l~~g~~~~~~~PcT~~gv-i~lL~~~---~i~l~GK~vvVIGrs--~~VGkpla~lL~~~-gAtVtv~hs~-------- 275 (375)
- .+...||=+.+= +.+.|+. |.+++|+++++||-+ +-|...++.+|... |++|++++-.
T Consensus 130 ~------g~~~HPtQaLaDl~Ti~e~~~~~g~~l~g~kia~vGD~~~~rv~~Sl~~~l~~~~g~~v~~~~P~~~~~~~~~ 203 (338)
T PRK08192 130 D------GSNEHPTQALLDLFTIQKELAHAGRGIDGMHIAMVGDLKFGRTVHSLSRLLCMYKNVSFTLVSPKELAMPDYV 203 (338)
T ss_pred C------CCCCCcHHHHHHHHHHHHHhhccCCCcCCCEEEEECcCCCCchHHHHHHHHHHhcCCEEEEECCccccCCHHH
Confidence 1 135679988874 4554543 347999999999995 33577777666544 8999888532
Q ss_pred -------------CCCHHhhccCCcEEEEccC
Q 017184 276 -------------TKNPEEITRQADIIISAVG 294 (375)
Q Consensus 276 -------------t~~L~~~l~~ADIVIsAvG 294 (375)
+.|+++.+++||+|.+..+
T Consensus 204 ~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~~~ 235 (338)
T PRK08192 204 ISDIENAGHKITITDQLEGNLDKADILYLTRI 235 (338)
T ss_pred HHHHHHcCCeEEEEcCHHHHHccCCEEEEcCc
Confidence 2577899999999998543
No 212
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=95.57 E-value=0.02 Score=53.55 Aligned_cols=69 Identities=22% Similarity=0.324 Sum_probs=49.9
Q ss_pred EEEEEc-CCcccHHHHHHHHhhCCCeEEEEcCCC-------------------------CCHHhhccCCcEEEEccCCCC
Q 017184 244 RAVVIG-RSNIVGMPAALLLQREDATVSIVHSRT-------------------------KNPEEITRQADIIISAVGQPN 297 (375)
Q Consensus 244 ~vvVIG-rs~~VGkpla~lL~~~gAtVtv~hs~t-------------------------~~L~~~l~~ADIVIsAvG~p~ 297 (375)
++.||| .|. +|..++..|.+.|.+|++.+++. .+..+.++++|+||.+++...
T Consensus 2 kI~IIGG~G~-mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~ea~~~aDvVilavp~~~ 80 (219)
T TIGR01915 2 KIAVLGGTGD-QGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGADNAEAAKRADVVILAVPWDH 80 (219)
T ss_pred EEEEEcCCCH-HHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEeChHHHHhcCCEEEEECCHHH
Confidence 689998 566 59999999999999999886642 123456789999999998654
Q ss_pred c---cc--CCCcCCCcEEEEee
Q 017184 298 M---VR--GSWIKPGAVIIDVG 314 (375)
Q Consensus 298 ~---I~--~~~vk~gavVIDvg 314 (375)
+ +. ...++ +.+|||+.
T Consensus 81 ~~~~l~~l~~~l~-~~vvI~~~ 101 (219)
T TIGR01915 81 VLKTLESLRDELS-GKLVISPV 101 (219)
T ss_pred HHHHHHHHHHhcc-CCEEEEec
Confidence 3 21 12233 47899983
No 213
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.55 E-value=0.032 Score=52.04 Aligned_cols=38 Identities=29% Similarity=0.422 Sum_probs=33.2
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
..++||+++|.|+++-+|+.++..|.++|++|.++.++
T Consensus 3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T PRK06463 3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNS 40 (255)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999998889999999999999998877543
No 214
>PRK06199 ornithine cyclodeaminase; Validated
Probab=95.55 E-value=0.027 Score=57.62 Aligned_cols=76 Identities=21% Similarity=0.322 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhh-C-C-CeEEEEcCCC-----------------------CCHHhhccCCcEEEEccC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQR-E-D-ATVSIVHSRT-----------------------KNPEEITRQADIIISAVG 294 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~-~-g-AtVtv~hs~t-----------------------~~L~~~l~~ADIVIsAvG 294 (375)
.-+++.|||.|.- ++.-...+.. + + -+|.+.+++. .+.++.+++|||||++|+
T Consensus 154 da~~l~iiG~G~Q-A~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~ 232 (379)
T PRK06199 154 DSKVVGLLGPGVM-GKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNS 232 (379)
T ss_pred CCCEEEEECCcHH-HHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccC
Confidence 3578888888775 7776666654 2 2 3677776541 346678999999999997
Q ss_pred CC-------CcccCCCcCCCcEEEEeeecC
Q 017184 295 QP-------NMVRGSWIKPGAVIIDVGINP 317 (375)
Q Consensus 295 ~p-------~~I~~~~vk~gavVIDvgin~ 317 (375)
.. -++..+|+|||+.|+=+|...
T Consensus 233 s~~~~~s~~Pv~~~~~lkpG~hv~~ig~~e 262 (379)
T PRK06199 233 GETGDPSTYPYVKREWVKPGAFLLMPAACR 262 (379)
T ss_pred CCCCCCCcCcEecHHHcCCCcEEecCCccc
Confidence 42 257899999999888777543
No 215
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.031 Score=52.12 Aligned_cols=38 Identities=26% Similarity=0.390 Sum_probs=34.2
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARS 42 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999999889999999999999999888764
No 216
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.017 Score=53.76 Aligned_cols=37 Identities=27% Similarity=0.375 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~ 39 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR 39 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999989999999999999999887654
No 217
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=95.52 E-value=0.022 Score=60.20 Aligned_cols=73 Identities=25% Similarity=0.358 Sum_probs=56.1
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC---------------------CHHhhcc---CCcEEEEccCCCCcc
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------------NPEEITR---QADIIISAVGQPNMV 299 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~---------------------~L~~~l~---~ADIVIsAvG~p~~I 299 (375)
+|-+||-|.+ |.++|..|+++|.+|+++||+.. ++++.++ ++|+||+.+.....+
T Consensus 8 ~IG~IGLG~M-G~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v~~~~aV 86 (493)
T PLN02350 8 RIGLAGLAVM-GQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILVKAGAPV 86 (493)
T ss_pred CEEEEeeHHH-HHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEECCCcHHH
Confidence 6899999886 99999999999999999998631 2334444 499999998866532
Q ss_pred c------CCCcCCCcEEEEeeecC
Q 017184 300 R------GSWIKPGAVIIDVGINP 317 (375)
Q Consensus 300 ~------~~~vk~gavVIDvgin~ 317 (375)
+ ...+++|.++||.|...
T Consensus 87 ~~Vi~gl~~~l~~G~iiID~sT~~ 110 (493)
T PLN02350 87 DQTIKALSEYMEPGDCIIDGGNEW 110 (493)
T ss_pred HHHHHHHHhhcCCCCEEEECCCCC
Confidence 1 13468899999999763
No 218
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=95.50 E-value=0.023 Score=59.67 Aligned_cols=73 Identities=19% Similarity=0.270 Sum_probs=54.0
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------------CCHHhhcc---CCcEEEEccCCCCc-
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------KNPEEITR---QADIIISAVGQPNM- 298 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------------~~L~~~l~---~ADIVIsAvG~p~~- 298 (375)
.++.|||.|.. |.++|..|+++|.+|++++++. .++++.+. ++|+||..+..+..
T Consensus 2 ~~IgvIGLG~M-G~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~~v 80 (470)
T PTZ00142 2 SDIGLIGLAVM-GQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGEAV 80 (470)
T ss_pred CEEEEEeEhHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChHHH
Confidence 36899999886 9999999999999999998752 23444454 58988877654432
Q ss_pred ---cc--CCCcCCCcEEEEeeec
Q 017184 299 ---VR--GSWIKPGAVIIDVGIN 316 (375)
Q Consensus 299 ---I~--~~~vk~gavVIDvgin 316 (375)
+. ...+++|.+|||.|..
T Consensus 81 ~~vi~~l~~~L~~g~iIID~gn~ 103 (470)
T PTZ00142 81 DETIDNLLPLLEKGDIIIDGGNE 103 (470)
T ss_pred HHHHHHHHhhCCCCCEEEECCCC
Confidence 21 1357889999999854
No 219
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.49 E-value=0.029 Score=54.43 Aligned_cols=71 Identities=20% Similarity=0.229 Sum_probs=53.0
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC---------------------------------------CCCHHhhc
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR---------------------------------------TKNPEEIT 283 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~---------------------------------------t~~L~~~l 283 (375)
++|.|||.|.+ |..+|..|++.|.+|+++.++ +.++++.+
T Consensus 4 ~kIaViGaG~m-G~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~ 82 (287)
T PRK08293 4 KNVTVAGAGVL-GSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEAV 82 (287)
T ss_pred cEEEEECCCHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHHh
Confidence 58999999775 999999999999999998543 23556678
Q ss_pred cCCcEEEEccCCCC-----ccc--CCCcCCCcEEEEee
Q 017184 284 RQADIIISAVGQPN-----MVR--GSWIKPGAVIIDVG 314 (375)
Q Consensus 284 ~~ADIVIsAvG~p~-----~I~--~~~vk~gavVIDvg 314 (375)
++||+||.|++..- ++. ...+++++++.+..
T Consensus 83 ~~aDlVieavpe~~~~k~~~~~~l~~~~~~~~ii~snt 120 (287)
T PRK08293 83 KDADLVIEAVPEDPEIKGDFYEELAKVAPEKTIFATNS 120 (287)
T ss_pred cCCCEEEEeccCCHHHHHHHHHHHHhhCCCCCEEEECc
Confidence 99999999998531 111 13467777776644
No 220
>PRK07680 late competence protein ComER; Validated
Probab=95.48 E-value=0.022 Score=54.82 Aligned_cols=69 Identities=19% Similarity=0.306 Sum_probs=51.5
Q ss_pred EEEEEcCCcccHHHHHHHHhhCC----CeEEEEcCCC----------------CCHHhhccCCcEEEEccCCCCc----c
Q 017184 244 RAVVIGRSNIVGMPAALLLQRED----ATVSIVHSRT----------------KNPEEITRQADIIISAVGQPNM----V 299 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~g----AtVtv~hs~t----------------~~L~~~l~~ADIVIsAvG~p~~----I 299 (375)
++.|||.|.+ |.+++..|.+.| .+|++++++. .+..+.+.++|+||.++. |.. +
T Consensus 2 ~I~iIG~G~m-G~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~aDiVilav~-p~~~~~vl 79 (273)
T PRK07680 2 NIGFIGTGNM-GTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHVAKTIEEVISQSDLIFICVK-PLDIYPLL 79 (273)
T ss_pred EEEEECccHH-HHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEEECCHHHHHHhCCEEEEecC-HHHHHHHH
Confidence 5899999885 999999999887 3789988752 244566789999999995 332 2
Q ss_pred c--CCCcCCCcEEEEee
Q 017184 300 R--GSWIKPGAVIIDVG 314 (375)
Q Consensus 300 ~--~~~vk~gavVIDvg 314 (375)
+ ...++++.+||++.
T Consensus 80 ~~l~~~l~~~~~iis~~ 96 (273)
T PRK07680 80 QKLAPHLTDEHCLVSIT 96 (273)
T ss_pred HHHHhhcCCCCEEEEEC
Confidence 1 13566788999986
No 221
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=95.47 E-value=0.029 Score=55.81 Aligned_cols=55 Identities=20% Similarity=0.387 Sum_probs=43.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCC--eEEEEcCCCC-----------------------CHHhhccCCcEEEEccCC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRTK-----------------------NPEEITRQADIIISAVGQ 295 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gA--tVtv~hs~t~-----------------------~L~~~l~~ADIVIsAvG~ 295 (375)
.|+||.|||+|. ||..++..|+..|. ++.+++.+.. +-.+.+++|||||.++|.
T Consensus 5 ~~~ki~iiGaG~-vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIitag~ 83 (315)
T PRK00066 5 QHNKVVLVGDGA-VGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVITAGA 83 (315)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEEecCC
Confidence 578999999977 59999999998885 6777765311 123568999999999997
Q ss_pred C
Q 017184 296 P 296 (375)
Q Consensus 296 p 296 (375)
|
T Consensus 84 ~ 84 (315)
T PRK00066 84 P 84 (315)
T ss_pred C
Confidence 5
No 222
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=95.37 E-value=0.055 Score=53.98 Aligned_cols=93 Identities=19% Similarity=0.267 Sum_probs=62.1
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCC---------------------HHh
Q 017184 223 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------------PEE 281 (375)
Q Consensus 223 PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~---------------------L~~ 281 (375)
+|....++..+...+..-.|++|+|.|.|. ||..+++++...|++|+++...... +.+
T Consensus 165 ~~~~~ta~~al~~~~~~~~g~~VlV~G~G~-vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~ 243 (360)
T PLN02586 165 LCAGITVYSPMKYYGMTEPGKHLGVAGLGG-LGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKA 243 (360)
T ss_pred hcchHHHHHHHHHhcccCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHh
Confidence 444444455555555444799999999876 5999999999999987765332211 112
Q ss_pred hccCCcEEEEccCCCCccc--CCCcCCCcEEEEeeec
Q 017184 282 ITRQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 316 (375)
Q Consensus 282 ~l~~ADIVIsAvG~p~~I~--~~~vk~gavVIDvgin 316 (375)
.+..+|+||.++|.+..+. -+.++++..++.+|..
T Consensus 244 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~ 280 (360)
T PLN02586 244 AIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLP 280 (360)
T ss_pred hcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCC
Confidence 2234799999999764332 2467888888889864
No 223
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=95.36 E-value=0.042 Score=51.98 Aligned_cols=48 Identities=21% Similarity=0.270 Sum_probs=39.5
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcCCC
Q 017184 228 GCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT 276 (375)
Q Consensus 228 gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs~t 276 (375)
++.+.+++.+.+++||+|+|.|.|+ ||+.++.+|.++|+ .|.++.++.
T Consensus 9 ~~~~~~~~~~~~l~g~~vaIqGfGn-VG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 9 AMKAAMKHLGDSLEGLTVAVQGLGN-VGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred HHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEEcCCC
Confidence 3455666778899999999999998 59999999999987 577776653
No 224
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.34 E-value=0.037 Score=57.33 Aligned_cols=35 Identities=26% Similarity=0.397 Sum_probs=32.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+.||+|.|+|.|.. |++++.+|.+.|++|+++..+
T Consensus 12 ~~~~~i~v~G~G~s-G~a~a~~L~~~G~~V~~~D~~ 46 (458)
T PRK01710 12 IKNKKVAVVGIGVS-NIPLIKFLVKLGAKVTAFDKK 46 (458)
T ss_pred hcCCeEEEEcccHH-HHHHHHHHHHCCCEEEEECCC
Confidence 46899999999998 999999999999999999865
No 225
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=95.33 E-value=0.03 Score=49.50 Aligned_cols=52 Identities=27% Similarity=0.388 Sum_probs=43.5
Q ss_pred EEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC-------------------CHHhhccCCcEEEEccCCC
Q 017184 245 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------------NPEEITRQADIIISAVGQP 296 (375)
Q Consensus 245 vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~-------------------~L~~~l~~ADIVIsAvG~p 296 (375)
|+|+|+++.+|+.++..|+++|.+|+..-|+.. .+.+.++.+|.||.++|.+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAEDSPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHHCTTEEEEESCTTCHHHHHHHHTTSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcccccccccceeeehhhhhhhhhhhhcchhhhhhhhh
Confidence 689999888999999999999999999877632 2456788999999999843
No 226
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=95.32 E-value=0.3 Score=50.39 Aligned_cols=75 Identities=13% Similarity=0.154 Sum_probs=55.7
Q ss_pred CCCCCCCEEEEEcCC---------cccHHHHHHHHhhCC-CeEEEEcCC-------------CCCHHhhccCCcEEEEcc
Q 017184 237 GFDIKGKRAVVIGRS---------NIVGMPAALLLQRED-ATVSIVHSR-------------TKNPEEITRQADIIISAV 293 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs---------~~VGkpla~lL~~~g-AtVtv~hs~-------------t~~L~~~l~~ADIVIsAv 293 (375)
+.+++||+|.|+|-+ +.-...++..|.++| ++|.+.+-. ..++++.++.||.||..+
T Consensus 315 ~~~~~~~~v~vlGlafK~~t~d~r~Sp~~~l~~~L~~~gg~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t 394 (415)
T PRK11064 315 DKRASEVKIACFGLAFKPNIDDLRESPAMEIAELIAQWHSGETLVVEPNIHQLPKKLDGLVTLVSLDEALATADVLVMLV 394 (415)
T ss_pred ccCcCCCEEEEEeeEECCCCcchhhChHHHHHHHHHhcCCcEEEEECCCCCchhhhccCceeeCCHHHHHhCCCEEEECC
Confidence 677899999999953 223678899999996 999885432 135778899999999999
Q ss_pred CCCCcccCCC--cCCCcEEEE
Q 017184 294 GQPNMVRGSW--IKPGAVIID 312 (375)
Q Consensus 294 G~p~~I~~~~--vk~gavVID 312 (375)
..+.|-..+| ++. -+|||
T Consensus 395 ~~~~~~~~~~~~~~~-~~v~D 414 (415)
T PRK11064 395 DHSQFKAINGDNVHQ-QWVVD 414 (415)
T ss_pred CCHHhccCCHHHhCC-CEEEe
Confidence 9987743332 444 37777
No 227
>PLN02477 glutamate dehydrogenase
Probab=95.27 E-value=0.04 Score=57.01 Aligned_cols=54 Identities=28% Similarity=0.362 Sum_probs=45.2
Q ss_pred cccCCHHHHH----HHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEE-EEcCC
Q 017184 221 FIPCTPKGCI----ELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVS-IVHSR 275 (375)
Q Consensus 221 ~~PcT~~gvi----~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVt-v~hs~ 275 (375)
-.+.|..|+. +.+++++.+++|++|+|.|.|+ ||+.++.+|.++|+.|+ |++++
T Consensus 181 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~VaIqGfGn-VG~~~A~~L~e~GakVVaVsD~~ 239 (410)
T PLN02477 181 REAATGRGVVFATEALLAEHGKSIAGQTFVIQGFGN-VGSWAAQLIHEKGGKIVAVSDIT 239 (410)
T ss_pred CCccchHHHHHHHHHHHHHcCCCccCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEECCC
Confidence 3478888865 5556678999999999999988 59999999999999877 77664
No 228
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.26 E-value=0.031 Score=54.12 Aligned_cols=39 Identities=38% Similarity=0.483 Sum_probs=34.9
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
...++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~ 73 (293)
T PRK05866 35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARR 73 (293)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 456789999999998888999999999999999998775
No 229
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.26 E-value=0.02 Score=53.56 Aligned_cols=41 Identities=17% Similarity=0.251 Sum_probs=36.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCH
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP 279 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L 279 (375)
+++||+++|.|+|.-+|+.++..|+++|++|.+++|+...+
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l 42 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSAL 42 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 57899999999999999999999999999999988765433
No 230
>PRK10637 cysG siroheme synthase; Provisional
Probab=95.25 E-value=0.025 Score=58.90 Aligned_cols=113 Identities=14% Similarity=0.202 Sum_probs=68.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC-CCCH-----------------HhhccCCcEEEEccCCCCc-
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-TKNP-----------------EEITRQADIIISAVGQPNM- 298 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~-t~~L-----------------~~~l~~ADIVIsAvG~p~~- 298 (375)
++++||+|+|||.|.+ +.-=+..|++.||.|||+... ++++ .+.+..+++||.|++.+.+
T Consensus 8 ~~l~~~~vlvvGgG~v-A~rk~~~ll~~ga~v~visp~~~~~~~~l~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~~n 86 (457)
T PRK10637 8 CQLRDRDCLLVGGGDV-AERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDAVN 86 (457)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCEEEEECCCCHHHh
Confidence 6899999999999995 777677888899999998433 1122 2457789999999987653
Q ss_pred --ccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchhhhhhh---cceeccCCCCccHHHHHHHHHHHH
Q 017184 299 --VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEV---ASAITPVPGGVGPMTIAMLLSNTL 365 (375)
Q Consensus 299 --I~~~~vk~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~---a~~iTPVPGGVGp~T~amLl~N~v 365 (375)
|-.+.-+.| +.+++.-++.. +|+-|..+.+. .-+|+ -+|-.|..+..|-+++-
T Consensus 87 ~~i~~~a~~~~-~lvN~~d~~~~-----------~~f~~pa~~~~g~l~iais--T~G~sP~~a~~lr~~ie 144 (457)
T PRK10637 87 QRVSEAAEARR-IFCNVVDAPKA-----------ASFIMPSIIDRSPLMVAVS--SGGTSPVLARLLREKLE 144 (457)
T ss_pred HHHHHHHHHcC-cEEEECCCccc-----------CeEEEeeEEecCCEEEEEE--CCCCCcHHHHHHHHHHH
Confidence 221111223 45555544321 23333332222 22343 37888887776654443
No 231
>PLN02858 fructose-bisphosphate aldolase
Probab=95.23 E-value=0.027 Score=66.14 Aligned_cols=75 Identities=20% Similarity=0.275 Sum_probs=60.4
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------CCHHhhccCCcEEEEccCCCCccc-----C
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPNMVR-----G 301 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------~~L~~~l~~ADIVIsAvG~p~~I~-----~ 301 (375)
.+++|-+||-|.+ |.++|..|++.|.+|++.+++. .+..+..+++|+||+.+..+.-+. .
T Consensus 3 ~~~~IGfIGLG~M-G~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~~~s~~e~a~~advVi~~l~~~~~v~~V~~g~ 81 (1378)
T PLN02858 3 SAGVVGFVGLDSL-SFELASSLLRSGFKVQAFEISTPLMEKFCELGGHRCDSPAEAAKDAAALVVVLSHPDQVDDVFFGD 81 (1378)
T ss_pred CCCeEEEEchhHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEEcCChHHHHHHHhch
Confidence 4678999999986 9999999999999999998862 356688899999999998655221 1
Q ss_pred ----CCcCCCcEEEEeeec
Q 017184 302 ----SWIKPGAVIIDVGIN 316 (375)
Q Consensus 302 ----~~vk~gavVIDvgin 316 (375)
+.+++|.++||.++.
T Consensus 82 ~g~~~~l~~g~iivd~STi 100 (1378)
T PLN02858 82 EGAAKGLQKGAVILIRSTI 100 (1378)
T ss_pred hhHHhcCCCcCEEEECCCC
Confidence 235789999999865
No 232
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.23 E-value=0.037 Score=51.88 Aligned_cols=37 Identities=27% Similarity=0.346 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||.++|.|++.-+|+.++..|+++|++|+++.++
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~ 41 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVA 41 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCc
Confidence 5789999999999999999999999999999887653
No 233
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=95.21 E-value=0.039 Score=56.95 Aligned_cols=40 Identities=28% Similarity=0.402 Sum_probs=35.4
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
...++||+++|.|+++-+|+.++..|.++|++|+++.++.
T Consensus 173 a~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~ 212 (406)
T PRK07424 173 ALSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNS 212 (406)
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3567899999999999999999999999999999887653
No 234
>PRK12828 short chain dehydrogenase; Provisional
Probab=95.18 E-value=0.027 Score=51.22 Aligned_cols=38 Identities=21% Similarity=0.321 Sum_probs=34.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
.++||+++|.|+++.+|+.++..|+++|++|+++.|+.
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~ 41 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGA 41 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCCh
Confidence 46899999999999999999999999999999988754
No 235
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]
Probab=95.17 E-value=0.07 Score=55.85 Aligned_cols=123 Identities=22% Similarity=0.284 Sum_probs=73.5
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCC--HHhhccCCcEEEEccCCCCcccCCCcC-CCcEEEEeeec
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN--PEEITRQADIIISAVGQPNMVRGSWIK-PGAVIIDVGIN 316 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~--L~~~l~~ADIVIsAvG~p~~I~~~~vk-~gavVIDvgin 316 (375)
+.||+|+|+|-|.. |++++..|.++|+.|++++.+... ....-...+-|=...|.- .. +|.. -..+|..=|++
T Consensus 5 ~~~~kv~V~GLG~s-G~a~a~~L~~~G~~v~v~D~~~~~~~~~~~~~~~~~i~~~~g~~-~~--~~~~~~d~vV~SPGi~ 80 (448)
T COG0771 5 FQGKKVLVLGLGKS-GLAAARFLLKLGAEVTVSDDRPAPEGLAAQPLLLEGIEVELGSH-DD--EDLAEFDLVVKSPGIP 80 (448)
T ss_pred ccCCEEEEEecccc-cHHHHHHHHHCCCeEEEEcCCCCccchhhhhhhccCceeecCcc-ch--hccccCCEEEECCCCC
Confidence 45999999999999 999999999999999999865433 111100111111222221 11 2332 25566666665
Q ss_pred CCCCC----CCCCCceeecccchhhhhh--hcceeccCCCCccHHHHHHHHHHHHHHHH
Q 017184 317 PVEDA----KSPRGYRLVGDVCYEEACE--VASAITPVPGGVGPMTIAMLLSNTLTSAK 369 (375)
Q Consensus 317 ~~~~~----~~~~g~kl~GDVd~~~v~~--~a~~iTPVPGGVGp~T~amLl~N~v~a~~ 369 (375)
+.. + -...|-++.||++.-- .. .+-++ -|-|==|.-|+.-|+.++++++-
T Consensus 81 ~~~-p~v~~A~~~gi~i~~dieL~~-r~~~~~p~v-aITGTNGKTTTTsli~~~l~~~G 136 (448)
T COG0771 81 PTH-PLVEAAKAAGIEIIGDIELFY-RLSGEAPIV-AITGTNGKTTTTSLIAHLLKAAG 136 (448)
T ss_pred CCC-HHHHHHHHcCCcEEeHHHHHH-HhcCCCCEE-EEECCCchHHHHHHHHHHHHhcC
Confidence 531 1 0123457899987422 11 12221 23466679999999999998864
No 236
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.08 E-value=0.024 Score=55.05 Aligned_cols=70 Identities=20% Similarity=0.262 Sum_probs=51.0
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------------------------------CCHHhhcc
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------------------KNPEEITR 284 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------------------------------~~L~~~l~ 284 (375)
++|.|||.|.+ |.++|..|+..|.+|++.+++. .++ +.+.
T Consensus 5 ~kI~vIGaG~m-G~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 82 (292)
T PRK07530 5 KKVGVIGAGQM-GNGIAHVCALAGYDVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARISTATDL-EDLA 82 (292)
T ss_pred CEEEEECCcHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEeeCCH-HHhc
Confidence 68999999885 9999999999999999987642 122 3467
Q ss_pred CCcEEEEccCCCCc-----cc--CCCcCCCcEEE-Eee
Q 017184 285 QADIIISAVGQPNM-----VR--GSWIKPGAVII-DVG 314 (375)
Q Consensus 285 ~ADIVIsAvG~p~~-----I~--~~~vk~gavVI-Dvg 314 (375)
+||+||.+++...- +. ...++++++++ +.+
T Consensus 83 ~aD~Vieavpe~~~~k~~~~~~l~~~~~~~~ii~s~ts 120 (292)
T PRK07530 83 DCDLVIEAATEDETVKRKIFAQLCPVLKPEAILATNTS 120 (292)
T ss_pred CCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEEcCC
Confidence 89999999985321 21 13467787776 443
No 237
>PRK04523 N-acetylornithine carbamoyltransferase; Reviewed
Probab=95.08 E-value=0.34 Score=48.86 Aligned_cols=153 Identities=16% Similarity=0.155 Sum_probs=96.5
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCCC--------------CCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCC-----
Q 017184 127 DSATYVRNKKKACQSVGINSFEVHLPED--------------TSEQEVLKHISVFNDDPSVHGILVQLPLPCHID----- 187 (375)
Q Consensus 127 aS~~Yv~~k~k~a~~~GI~~~~~~l~~~--------------vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~----- 187 (375)
.|..---+=..++.++|-++.++.-... ...|.+.+.++-|+.- +|+|.+-.|-. +.+
T Consensus 48 pSTRTR~SFe~A~~~LGg~~i~l~~~~ss~~~e~~~g~~~~~~kgEsl~Dtarvls~~--~D~iv~R~~~~-g~~~~~~~ 124 (335)
T PRK04523 48 PSLRTRTSFELGAFQLGGHAVVLQPGKDAWPIEFELGAVMDGETEEHIREVARVLSRY--VDLIGVRAFPK-FVDWSKDR 124 (335)
T ss_pred CCchhHHHHHHHHHHcCCeEEEeCcccccchhhcccccccCCCCCcCHHHHHHHHHHh--CcEEEEeCCcc-ccccccch
Confidence 3444444567789999999887743321 1236677777777764 78899886522 111
Q ss_pred HHHHHhhCCcccccCccccchhhhcccCCCccccccCCHHHHHHHHHHhCCCC-CCCEEEEEcCC------cccHHHHHH
Q 017184 188 EQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDI-KGKRAVVIGRS------NIVGMPAAL 260 (375)
Q Consensus 188 ~~~i~~~I~p~KDVDGl~~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l-~GK~vvVIGrs------~~VGkpla~ 260 (375)
....++.+...-+ +-.+|. + .. +.||=+.+=+--++++...+ +|++++|++.| .-|.+.++.
T Consensus 125 ~~~~~~~~a~~s~---vPVINa-----~--~~-~HPtQaLaDl~Ti~e~~g~~~~g~ki~i~~~gd~~~~~~~v~~S~~~ 193 (335)
T PRK04523 125 QDQVLNSFAKYST---VPVINM-----E--TI-THPCQELAHALALQEHFGTTLRGKKYVLTWTYHPKPLNTAVANSALL 193 (335)
T ss_pred hHHHHHHHHHhCC---CCEEEC-----C--CC-CChHHHHHHHHHHHHHhCCccCCCEEEEEEeccCcccccHHHHHHHH
Confidence 1223333322222 344453 2 23 77998888544444443468 89999887532 236888888
Q ss_pred HHhhCCCeEEEEcC-C-------------------------CCCHHhhccCCcEEEEcc
Q 017184 261 LLQREDATVSIVHS-R-------------------------TKNPEEITRQADIIISAV 293 (375)
Q Consensus 261 lL~~~gAtVtv~hs-~-------------------------t~~L~~~l~~ADIVIsAv 293 (375)
+|...|++|++|+- . +.|+.+.++.||+|.+-.
T Consensus 194 ~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvy~~~ 252 (335)
T PRK04523 194 IATRLGMDVTLLCPTPDYILDERYMDWAEQNAAESGGSLTVSHDIDSAYAGADVVYAKS 252 (335)
T ss_pred HHHHcCCEEEEECCchhhCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEece
Confidence 89999999999875 2 245678899999998644
No 238
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.08 E-value=0.028 Score=52.41 Aligned_cols=38 Identities=32% Similarity=0.399 Sum_probs=34.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
+++||+++|.|+++-+|+.++..|+++|++|++.+|+.
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~ 44 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDP 44 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 57899999999988899999999999999999887653
No 239
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.06 E-value=0.039 Score=53.92 Aligned_cols=53 Identities=23% Similarity=0.353 Sum_probs=43.5
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC---------------------------------CCHHhhccCCcEE
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------------------------KNPEEITRQADII 289 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t---------------------------------~~L~~~l~~ADIV 289 (375)
++|.|||.|.+ |.+++..|++.|.+|++++++. .++.+.++++|+|
T Consensus 5 ~~I~vIGaG~m-G~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDlV 83 (311)
T PRK06130 5 QNLAIIGAGTM-GSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADLV 83 (311)
T ss_pred cEEEEECCCHH-HHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCEE
Confidence 68999999885 9999999999999999987431 2344567899999
Q ss_pred EEccCCC
Q 017184 290 ISAVGQP 296 (375)
Q Consensus 290 IsAvG~p 296 (375)
|.++...
T Consensus 84 i~av~~~ 90 (311)
T PRK06130 84 IEAVPEK 90 (311)
T ss_pred EEeccCc
Confidence 9999754
No 240
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=95.06 E-value=0.042 Score=50.20 Aligned_cols=50 Identities=30% Similarity=0.474 Sum_probs=38.8
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC--------------------------------------CCCHHhhccC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSR--------------------------------------TKNPEEITRQ 285 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~--------------------------------------t~~L~~~l~~ 285 (375)
+|.|||+|.+ |+.+|.+++..|..|+++..+ +.++++.. +
T Consensus 1 ~V~ViGaG~m-G~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~~~-~ 78 (180)
T PF02737_consen 1 KVAVIGAGTM-GRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFTTDLEEAV-D 78 (180)
T ss_dssp EEEEES-SHH-HHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEESSGGGGC-T
T ss_pred CEEEEcCCHH-HHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccccCHHHHh-h
Confidence 6899999875 999999999999999999754 24666666 9
Q ss_pred CcEEEEccCC
Q 017184 286 ADIIISAVGQ 295 (375)
Q Consensus 286 ADIVIsAvG~ 295 (375)
||+||=++.-
T Consensus 79 adlViEai~E 88 (180)
T PF02737_consen 79 ADLVIEAIPE 88 (180)
T ss_dssp ESEEEE-S-S
T ss_pred hheehhhccc
Confidence 9999988863
No 241
>KOG0068 consensus D-3-phosphoglycerate dehydrogenase, D-isomer-specific 2-hydroxy acid dehydrogenase superfamily [Amino acid transport and metabolism]
Probab=95.05 E-value=0.038 Score=55.94 Aligned_cols=78 Identities=29% Similarity=0.384 Sum_probs=62.7
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC------------CCHHhhccCCcEEEEccCC-C---Ccc
Q 017184 236 YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVGQ-P---NMV 299 (375)
Q Consensus 236 ~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t------------~~L~~~l~~ADIVIsAvG~-p---~~I 299 (375)
.|.++.||+.-|+|.|.+ |.-+|..+...|..|.-.+--+ -.++|.+.+||.|-.-++- | +++
T Consensus 140 ~G~el~GKTLgvlG~GrI-GseVA~r~k~~gm~vI~~dpi~~~~~~~a~gvq~vsl~Eil~~ADFitlH~PLtP~T~~li 218 (406)
T KOG0068|consen 140 LGWELRGKTLGVLGLGRI-GSEVAVRAKAMGMHVIGYDPITPMALAEAFGVQLVSLEEILPKADFITLHVPLTPSTEKLL 218 (406)
T ss_pred eeeEEeccEEEEeecccc-hHHHHHHHHhcCceEEeecCCCchHHHHhccceeeeHHHHHhhcCEEEEccCCCcchhhcc
Confidence 467899999999999996 9999999999998877776443 2578999999999877662 3 356
Q ss_pred cCC---CcCCCcEEEEee
Q 017184 300 RGS---WIKPGAVIIDVG 314 (375)
Q Consensus 300 ~~~---~vk~gavVIDvg 314 (375)
..+ ..|+|..||++.
T Consensus 219 n~~tfA~mKkGVriIN~a 236 (406)
T KOG0068|consen 219 NDETFAKMKKGVRIINVA 236 (406)
T ss_pred CHHHHHHhhCCcEEEEec
Confidence 555 359999999986
No 242
>PRK12939 short chain dehydrogenase; Provisional
Probab=95.05 E-value=0.045 Score=50.28 Aligned_cols=37 Identities=32% Similarity=0.399 Sum_probs=32.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.++||+++|.|+++-+|+.++..|.++|++|+++.++
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~ 40 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGL 40 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCC
Confidence 3679999999998888999999999999998887654
No 243
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=94.99 E-value=0.071 Score=53.23 Aligned_cols=56 Identities=27% Similarity=0.385 Sum_probs=43.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCC-CeEEEEcCC--------------------------CCCHHhhccCCcEEEEc
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSR--------------------------TKNPEEITRQADIIISA 292 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~g-AtVtv~hs~--------------------------t~~L~~~l~~ADIVIsA 292 (375)
++.++|+|||+|. ||..++..|+..| ++|.+.+.. +.++ +.+++||+||.+
T Consensus 4 ~~~~KI~IIGaG~-vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~-~~l~~aDiVI~t 81 (321)
T PTZ00082 4 IKRRKISLIGSGN-IGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY-EDIAGSDVVIVT 81 (321)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH-HHhCCCCEEEEC
Confidence 3557999999977 5999999999888 487777532 2344 578999999999
Q ss_pred cCCCC
Q 017184 293 VGQPN 297 (375)
Q Consensus 293 vG~p~ 297 (375)
+|.|.
T Consensus 82 ag~~~ 86 (321)
T PTZ00082 82 AGLTK 86 (321)
T ss_pred CCCCC
Confidence 98753
No 244
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=94.99 E-value=0.31 Score=51.40 Aligned_cols=79 Identities=18% Similarity=0.134 Sum_probs=56.3
Q ss_pred hCCCCCCCEEEEEcCC---------cccHHHHHHHHhhCCCeEEEEcCCCC-----------------------------
Q 017184 236 YGFDIKGKRAVVIGRS---------NIVGMPAALLLQREDATVSIVHSRTK----------------------------- 277 (375)
Q Consensus 236 ~~i~l~GK~vvVIGrs---------~~VGkpla~lL~~~gAtVtv~hs~t~----------------------------- 277 (375)
..-++.|++|.|+|.+ +.-...++..|.++|++|.+..-.-.
T Consensus 318 l~~~~~~~~VavlGlafK~~tdD~R~Spa~~li~~L~~~G~~V~~~DP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (473)
T PLN02353 318 MFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEEQIQRDLSMNKFDWDHPRHLQPMSPTAV 397 (473)
T ss_pred hhcccCCCEEEEEeeeecCCCCccccChHHHHHHHHHhCCCEEEEECCCCChHHHHHHhhcccccccccccccccccccc
Confidence 3346899999999953 22467899999999999998753310
Q ss_pred -------CHHhhccCCcEEEEccCCCCcccCC------CcCCCcEEEEee
Q 017184 278 -------NPEEITRQADIIISAVGQPNMVRGS------WIKPGAVIIDVG 314 (375)
Q Consensus 278 -------~L~~~l~~ADIVIsAvG~p~~I~~~------~vk~gavVIDvg 314 (375)
++.+.++.||+||.++..+.|-..+ .+++..+|||.-
T Consensus 398 ~~~~~~~~~~~a~~~aD~vvi~t~~~ef~~l~~~~~~~~m~~~~~viD~r 447 (473)
T PLN02353 398 KQVSVVWDAYEATKGAHGICILTEWDEFKTLDYQKIYDNMQKPAFVFDGR 447 (473)
T ss_pred cceeeeCCHHHHhcCCCEEEECCCChHhcccCHHHHHHhccCCCEEEECC
Confidence 2246789999999999988763222 234445899943
No 245
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.98 E-value=0.047 Score=56.95 Aligned_cols=124 Identities=15% Similarity=0.197 Sum_probs=71.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcC-CCcEEEEeeecC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIK-PGAVIIDVGINP 317 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk-~gavVIDvgin~ 317 (375)
.+.+|+|+|+|.|++ |++++.+|.++|++|++++++.....+.+.+..|.+.. |.- ..+++. ...+|+--|+++
T Consensus 12 ~~~~~~v~v~G~G~s-G~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~-~~~---~~~~~~~~d~vV~Spgi~~ 86 (473)
T PRK00141 12 QELSGRVLVAGAGVS-GRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADIS-TAE---ASDQLDSFSLVVTSPGWRP 86 (473)
T ss_pred cccCCeEEEEccCHH-HHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEe-CCC---chhHhcCCCEEEeCCCCCC
Confidence 468899999999997 99999999999999999987533222222222222211 100 011222 234454445543
Q ss_pred CCCCC----CCCCceeecccchhhhhh------hcceeccCCCCccHHHHHHHHHHHHHHH
Q 017184 318 VEDAK----SPRGYRLVGDVCYEEACE------VASAITPVPGGVGPMTIAMLLSNTLTSA 368 (375)
Q Consensus 318 ~~~~~----~~~g~kl~GDVd~~~v~~------~a~~iTPVPGGVGp~T~amLl~N~v~a~ 368 (375)
.. +. ...|-++.|++++..... ....+--|-|=.|.-|+.-|+.++++..
T Consensus 87 ~~-p~~~~a~~~gi~v~~~~el~~~~~~~~~~~~~~~vIaVTGTnGKTTTt~ml~~iL~~~ 146 (473)
T PRK00141 87 DS-PLLVDAQSQGLEVIGDVELAWRLDQAGVFGEPRTWLAVTGTNGKTTTTAMLAAMMQEG 146 (473)
T ss_pred CC-HHHHHHHHCCCceeeHHHHHHHhhhhhccCCCCCEEEEeCCCcHHHHHHHHHHHHHhc
Confidence 21 00 012335777776521110 0111223558889999999999998764
No 246
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.98 E-value=0.045 Score=57.34 Aligned_cols=111 Identities=17% Similarity=0.205 Sum_probs=65.9
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHH----------------hhccCCcEEEEccCCCCcccCCC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPE----------------EITRQADIIISAVGQPNMVRGSW 303 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~----------------~~l~~ADIVIsAvG~p~~I~~~~ 303 (375)
+.||+|+|+|.|.+ |++++.+|.+.|++|+++......++ +.++++|+||...|.|.--+ .
T Consensus 10 ~~~~~v~V~G~G~s-G~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~l~~~D~VV~SpGi~~~~p--~ 86 (488)
T PRK03369 10 LPGAPVLVAGAGVT-GRAVLAALTRFGARPTVCDDDPDALRPHAERGVATVSTSDAVQQIADYALVVTSPGFRPTAP--V 86 (488)
T ss_pred cCCCeEEEEcCCHH-HHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEEcCcchHhHhhcCCEEEECCCCCCCCH--H
Confidence 36899999999997 99999999999999999986532222 12233455554444331100 0
Q ss_pred cCCCcEEEEeeecCCCCCCCCCCceeecccchhhhhhh------cceeccCCCCccHHHHHHHHHHHHHHH
Q 017184 304 IKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEV------ASAITPVPGGVGPMTIAMLLSNTLTSA 368 (375)
Q Consensus 304 vk~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~------a~~iTPVPGGVGp~T~amLl~N~v~a~ 368 (375)
++. -...|-+++|++++-..... ...+--|-|-.|.-|+.-|+.++++.+
T Consensus 87 ~~~---------------a~~~gi~v~~~iel~~~~~~~~~~~~~~~vIgITGTnGKTTTt~li~~iL~~~ 142 (488)
T PRK03369 87 LAA---------------AAAAGVPIWGDVELAWRLDAAGCYGPPRRWLVVTGTNGKTTTTSMLHAMLIAA 142 (488)
T ss_pred HHH---------------HHHCCCcEeeHHHHhhhhhhhhccCCCCCEEEEECCCcHHHHHHHHHHHHHHc
Confidence 000 00112356676665210000 001112558899999999999998764
No 247
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=94.97 E-value=0.025 Score=52.66 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=35.8
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
...++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~ 45 (256)
T PRK06124 6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNA 45 (256)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCH
Confidence 3568999999999999999999999999999999987753
No 248
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=94.97 E-value=0.076 Score=52.20 Aligned_cols=84 Identities=18% Similarity=0.300 Sum_probs=58.2
Q ss_pred HHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcCC-------------------CCCHHhhcc---CCc
Q 017184 231 ELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR-------------------TKNPEEITR---QAD 287 (375)
Q Consensus 231 ~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs~-------------------t~~L~~~l~---~AD 287 (375)
..+++.+. ..|++|+|+|.|. ||..+++++...|+ .|+++.+. ..++.+.++ ..|
T Consensus 160 ~al~~~~~-~~g~~VlV~G~G~-vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~g~~D 237 (343)
T PRK09880 160 HAAHQAGD-LQGKRVFVSGVGP-IGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYFD 237 (343)
T ss_pred HHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccCCCCC
Confidence 33444443 3799999999865 69999999999998 56665432 122333332 379
Q ss_pred EEEEccCCCCcc--cCCCcCCCcEEEEeeec
Q 017184 288 IIISAVGQPNMV--RGSWIKPGAVIIDVGIN 316 (375)
Q Consensus 288 IVIsAvG~p~~I--~~~~vk~gavVIDvgin 316 (375)
+||.++|.+..+ --+.+++|-.++.+|..
T Consensus 238 ~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~ 268 (343)
T PRK09880 238 VSFEVSGHPSSINTCLEVTRAKGVMVQVGMG 268 (343)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEEccC
Confidence 999999986543 23568899999999964
No 249
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=94.95 E-value=0.024 Score=59.45 Aligned_cols=72 Identities=25% Similarity=0.280 Sum_probs=52.9
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC-------------------CHHhh---ccCCcEEEEccCCCCc---
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------------NPEEI---TRQADIIISAVGQPNM--- 298 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~-------------------~L~~~---l~~ADIVIsAvG~p~~--- 298 (375)
++.|||.|.+ |.++|..|+++|.+|++.+++.. ++++. ++++|+||..+.....
T Consensus 1 ~IG~IGLG~M-G~~mA~nL~~~G~~V~v~drt~~~~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~~~~~v~~ 79 (467)
T TIGR00873 1 DIGVIGLAVM-GSNLALNMADHGFTVSVYNRTPEKTDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVKAGAPVDA 79 (467)
T ss_pred CEEEEeeHHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECCCcHHHHH
Confidence 3789999886 99999999999999999987531 22222 3468999988776432
Q ss_pred -cc--CCCcCCCcEEEEeeec
Q 017184 299 -VR--GSWIKPGAVIIDVGIN 316 (375)
Q Consensus 299 -I~--~~~vk~gavVIDvgin 316 (375)
+. ...+++|.+|||.|..
T Consensus 80 Vi~~l~~~L~~g~iIID~gns 100 (467)
T TIGR00873 80 VINQLLPLLEKGDIIIDGGNS 100 (467)
T ss_pred HHHHHHhhCCCCCEEEECCCc
Confidence 21 1357889999999953
No 250
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=94.92 E-value=0.021 Score=57.12 Aligned_cols=136 Identities=22% Similarity=0.349 Sum_probs=82.9
Q ss_pred HHHHHHHHH----------hCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC---------------------
Q 017184 227 KGCIELLHR----------YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR--------------------- 275 (375)
Q Consensus 227 ~gvi~lL~~----------~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~--------------------- 275 (375)
.++++.+.. .+....+.+++++|.|-+ |-.++..-...|+-||-..-+
T Consensus 139 ~aVi~Aa~a~~rffpm~~TAagtv~pA~vlv~G~Gva-gl~aiata~~lG~iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee 217 (356)
T COG3288 139 IAVIGAALAYGRFFPMQITAAGTVSPAKVLVIGAGVA-GLAAIATAVRLGAIVTARDLRMFKKEQVESLGAKFLAVEDEE 217 (356)
T ss_pred HHHHHHHHHhhhcccchhhhcccccchhhhhhhHHHH-HHHHHHHHhhcceEEehhhhhhHHhhhhhhcccccccccccc
Confidence 567777776 446778889999999775 877766656667766654211
Q ss_pred ---------C--------CCHHhhccCCcEEEEcc---C--CCCcccCCCc---CCCcEEEEeeecCCCC-CCCCCCcee
Q 017184 276 ---------T--------KNPEEITRQADIIISAV---G--QPNMVRGSWI---KPGAVIIDVGINPVED-AKSPRGYRL 329 (375)
Q Consensus 276 ---------t--------~~L~~~l~~ADIVIsAv---G--~p~~I~~~~v---k~gavVIDvgin~~~~-~~~~~g~kl 329 (375)
+ +-+.++.++.||||+++ | .|.+|+.+|+ |||.+|||+....--+ ..+..| +.
T Consensus 218 ~~gGYAk~ms~~~~~~q~~~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg-~~ 296 (356)
T COG3288 218 SAGGYAKEMSEEFIAKQAELVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPG-KV 296 (356)
T ss_pred cCCCccccCCHHHHHHHHHHHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCC-eE
Confidence 0 12457899999999887 3 3557999886 9999999998654210 000011 11
Q ss_pred ecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHH
Q 017184 330 VGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAK 369 (375)
Q Consensus 330 ~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~ 369 (375)
+-+ .. .+..| .|-+||-+-.-...+.-+|++...+
T Consensus 297 v~~---~g-V~iig-~~nlp~r~a~~aS~LYa~Nl~~~l~ 331 (356)
T COG3288 297 VTK---NG-VKIIG-YTNLPGRLAAQASQLYATNLVNLLK 331 (356)
T ss_pred EEe---CC-eEEEe-ecCcchhhhhhHHHHHHHHHHHHHH
Confidence 110 00 12233 3456665555555566666665444
No 251
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=94.92 E-value=0.063 Score=50.30 Aligned_cols=37 Identities=24% Similarity=0.317 Sum_probs=33.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||.++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~ 42 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIH 42 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999998889999999999999999887654
No 252
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=94.90 E-value=0.037 Score=52.75 Aligned_cols=70 Identities=20% Similarity=0.303 Sum_probs=49.9
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCC---eEEEEcCCC----------------CCHHhhccCCcEEEEccCCCC---cccC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDA---TVSIVHSRT----------------KNPEEITRQADIIISAVGQPN---MVRG 301 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gA---tVtv~hs~t----------------~~L~~~l~~ADIVIsAvG~p~---~I~~ 301 (375)
++.|||.|.+ |.+++..|.+.|. .+.+++++. .+..+.++++|+||.++.... ++..
T Consensus 2 ~IgiIG~G~m-G~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~aDvVilav~p~~~~~vl~~ 80 (258)
T PRK06476 2 KIGFIGTGAI-TEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVRIAKDNQAVVDRSDVVFLAVRPQIAEEVLRA 80 (258)
T ss_pred eEEEECcCHH-HHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCceEeCCHHHHHHhCCEEEEEeCHHHHHHHHHH
Confidence 5899999886 9999999988774 356676541 245566789999999998322 2232
Q ss_pred CCcCCCcEEEEee
Q 017184 302 SWIKPGAVIIDVG 314 (375)
Q Consensus 302 ~~vk~gavVIDvg 314 (375)
-++++|.+||++.
T Consensus 81 l~~~~~~~vis~~ 93 (258)
T PRK06476 81 LRFRPGQTVISVI 93 (258)
T ss_pred hccCCCCEEEEEC
Confidence 3467788888865
No 253
>PLN02858 fructose-bisphosphate aldolase
Probab=94.90 E-value=0.036 Score=65.20 Aligned_cols=74 Identities=22% Similarity=0.273 Sum_probs=59.0
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------CCHHhhccCCcEEEEccCCCCc----c-cC-
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPNM----V-RG- 301 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------~~L~~~l~~ADIVIsAvG~p~~----I-~~- 301 (375)
.++|.+||-|.+ |.+++..|++.|.+|++++++. .+..+.++++|+||++++.|.- + ..
T Consensus 324 ~~~IGfIGlG~M-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga~~~~s~~e~~~~aDvVi~~V~~~~~v~~Vl~g~~ 402 (1378)
T PLN02858 324 VKRIGFIGLGAM-GFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLAGNSPAEVAKDVDVLVIMVANEVQAENVLFGDL 402 (1378)
T ss_pred CCeEEEECchHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEecCChHHHHHHHhchh
Confidence 378999999986 9999999999999999998752 3556788999999999996652 2 11
Q ss_pred ---CCcCCCcEEEEeeec
Q 017184 302 ---SWIKPGAVIIDVGIN 316 (375)
Q Consensus 302 ---~~vk~gavVIDvgin 316 (375)
+.+++|.++||.+..
T Consensus 403 g~~~~l~~g~ivVd~STv 420 (1378)
T PLN02858 403 GAVSALPAGASIVLSSTV 420 (1378)
T ss_pred hHHhcCCCCCEEEECCCC
Confidence 235789999998763
No 254
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=94.88 E-value=0.028 Score=52.30 Aligned_cols=37 Identities=22% Similarity=0.273 Sum_probs=34.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~ 42 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDIT 42 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCC
Confidence 5789999999999999999999999999999998876
No 255
>PLN02253 xanthoxin dehydrogenase
Probab=94.87 E-value=0.051 Score=51.43 Aligned_cols=37 Identities=30% Similarity=0.422 Sum_probs=33.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~ 51 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQ 51 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 4689999999999989999999999999999888653
No 256
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=94.86 E-value=0.026 Score=52.51 Aligned_cols=35 Identities=31% Similarity=0.549 Sum_probs=30.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 274 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs 274 (375)
.|++++|+|||.|++ |..++..|...|. ++++++.
T Consensus 18 kl~~~~VlviG~Ggl-Gs~ia~~La~~Gv~~i~lvD~ 53 (202)
T TIGR02356 18 RLLNSHVLIIGAGGL-GSPAALYLAGAGVGTIVIVDD 53 (202)
T ss_pred HhcCCCEEEECCCHH-HHHHHHHHHHcCCCeEEEecC
Confidence 468999999999996 9999999999996 7888753
No 257
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=94.86 E-value=0.082 Score=53.26 Aligned_cols=75 Identities=21% Similarity=0.430 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhC-C-CeEEEEcCC---------------------CCCHHhhccCCcEEEEccCCCC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQRE-D-ATVSIVHSR---------------------TKNPEEITRQADIIISAVGQPN 297 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~-g-AtVtv~hs~---------------------t~~L~~~l~~ADIVIsAvG~p~ 297 (375)
.-+...|||.|.- ++.-...+... + -+|.|..++ ..+.++.++.|||||++|....
T Consensus 129 da~~laiIGaG~q-A~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~ 207 (330)
T COG2423 129 DASTLAIIGAGAQ-ARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTE 207 (330)
T ss_pred CCcEEEEECCcHH-HHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCC
Confidence 3467888888775 76665555442 3 367776654 2467889999999999999654
Q ss_pred -cccCCCcCCCcEEEEeeec
Q 017184 298 -MVRGSWIKPGAVIIDVGIN 316 (375)
Q Consensus 298 -~I~~~~vk~gavVIDvgin 316 (375)
+++.+|++||+.|.=+|-+
T Consensus 208 Pil~~~~l~~G~hI~aiGad 227 (330)
T COG2423 208 PVLKAEWLKPGTHINAIGAD 227 (330)
T ss_pred CeecHhhcCCCcEEEecCCC
Confidence 5899999999999999954
No 258
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.85 E-value=0.039 Score=50.73 Aligned_cols=38 Identities=29% Similarity=0.358 Sum_probs=34.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
++++|+++|+|+++-+|+.++..|+++|++|++..|+.
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~ 39 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNE 39 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46899999999999899999999999999999988764
No 259
>PRK08339 short chain dehydrogenase; Provisional
Probab=94.85 E-value=0.034 Score=52.68 Aligned_cols=38 Identities=29% Similarity=0.403 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.+++||.++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~ 41 (263)
T PRK08339 4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRN 41 (263)
T ss_pred cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 45899999999998888999999999999999998765
No 260
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=94.81 E-value=0.046 Score=50.48 Aligned_cols=37 Identities=24% Similarity=0.268 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~ 38 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRS 38 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCc
Confidence 5789999999998889999999999999999887654
No 261
>PRK05867 short chain dehydrogenase; Provisional
Probab=94.80 E-value=0.038 Score=51.52 Aligned_cols=37 Identities=35% Similarity=0.504 Sum_probs=33.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~ 42 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARH 42 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 4789999999998888999999999999999988765
No 262
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=94.80 E-value=0.061 Score=53.01 Aligned_cols=69 Identities=23% Similarity=0.403 Sum_probs=51.7
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC------------------------------CCHHhhccCCcEEEEc
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------------------------KNPEEITRQADIIISA 292 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t------------------------------~~L~~~l~~ADIVIsA 292 (375)
.+|.|||.|.+ |.+++..|.+.|.+|+++.+.. .+. +.++.+|+||.+
T Consensus 3 mkI~IiG~G~m-G~~~A~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vil~ 80 (341)
T PRK08229 3 ARICVLGAGSI-GCYLGGRLAAAGADVTLIGRARIGDELRAHGLTLTDYRGRDVRVPPSAIAFSTDP-AALATADLVLVT 80 (341)
T ss_pred ceEEEECCCHH-HHHHHHHHHhcCCcEEEEecHHHHHHHHhcCceeecCCCcceecccceeEeccCh-hhccCCCEEEEE
Confidence 47999999885 9999999999999999987531 112 345789999999
Q ss_pred cCCCCc---cc--CCCcCCCcEEEEe
Q 017184 293 VGQPNM---VR--GSWIKPGAVIIDV 313 (375)
Q Consensus 293 vG~p~~---I~--~~~vk~gavVIDv 313 (375)
+..+.. +. ...++++.+|+++
T Consensus 81 vk~~~~~~~~~~l~~~~~~~~iii~~ 106 (341)
T PRK08229 81 VKSAATADAAAALAGHARPGAVVVSF 106 (341)
T ss_pred ecCcchHHHHHHHHhhCCCCCEEEEe
Confidence 986543 11 1245778888887
No 263
>PRK07062 short chain dehydrogenase; Provisional
Probab=94.80 E-value=0.033 Score=52.23 Aligned_cols=38 Identities=32% Similarity=0.476 Sum_probs=34.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.+++||.++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~ 41 (265)
T PRK07062 4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRD 41 (265)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 46899999999999889999999999999999988765
No 264
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=94.79 E-value=0.064 Score=51.48 Aligned_cols=53 Identities=26% Similarity=0.346 Sum_probs=41.8
Q ss_pred EEEEcCCcccHHHHHHHHhhCC----CeEEEEcCC-------------------------CCCHHhhccCCcEEEEccCC
Q 017184 245 AVVIGRSNIVGMPAALLLQRED----ATVSIVHSR-------------------------TKNPEEITRQADIIISAVGQ 295 (375)
Q Consensus 245 vvVIGrs~~VGkpla~lL~~~g----AtVtv~hs~-------------------------t~~L~~~l~~ADIVIsAvG~ 295 (375)
++|||+|+.+|..++..|+..| .+|++.+.+ +.|+++.+++||+||.++|.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~ 80 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV 80 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence 5799996678999999998888 578877532 24567889999999999987
Q ss_pred CC
Q 017184 296 PN 297 (375)
Q Consensus 296 p~ 297 (375)
|.
T Consensus 81 ~~ 82 (263)
T cd00650 81 GR 82 (263)
T ss_pred CC
Confidence 54
No 265
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=94.79 E-value=0.043 Score=53.38 Aligned_cols=72 Identities=25% Similarity=0.332 Sum_probs=51.6
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCH-------------------------------------HhhccC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP-------------------------------------EEITRQ 285 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L-------------------------------------~~~l~~ 285 (375)
|+|.|||.|.+ |.++|..|+..|.+|++++++...+ .+.+++
T Consensus 5 ~~V~vIG~G~m-G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (295)
T PLN02545 5 KKVGVVGAGQM-GSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEELRD 83 (295)
T ss_pred CEEEEECCCHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHhCC
Confidence 68999999886 9999999999999999997542111 135788
Q ss_pred CcEEEEccCC-CC----ccc--CCCcCCCcEEE-Eeee
Q 017184 286 ADIIISAVGQ-PN----MVR--GSWIKPGAVII-DVGI 315 (375)
Q Consensus 286 ADIVIsAvG~-p~----~I~--~~~vk~gavVI-Dvgi 315 (375)
||+||.++.. +. ++. .+.++++++++ |.+.
T Consensus 84 aD~Vieav~e~~~~k~~v~~~l~~~~~~~~il~s~tS~ 121 (295)
T PLN02545 84 ADFIIEAIVESEDLKKKLFSELDRICKPSAILASNTSS 121 (295)
T ss_pred CCEEEEcCccCHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 9999999873 22 111 13567777765 5543
No 266
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=94.76 E-value=0.041 Score=52.10 Aligned_cols=52 Identities=25% Similarity=0.423 Sum_probs=42.1
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC-----------------------CHHhh-ccCCcEEEEccCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------------------NPEEI-TRQADIIISAVGQ 295 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~-----------------------~L~~~-l~~ADIVIsAvG~ 295 (375)
++++|+|.|.. |.++|..|..+|.+|++..+... -|++. +.+||++|.++|.
T Consensus 1 m~iiIiG~G~v-G~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 1 MKIIIIGAGRV-GRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred CEEEEECCcHH-HHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence 57999999995 99999999999999999865421 13343 7889999999985
No 267
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=94.75 E-value=0.035 Score=56.83 Aligned_cols=76 Identities=16% Similarity=0.277 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhC-CCeEEEEcCCC---------------C------CHH-hhccCCcEEEEccCCC-
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQRE-DATVSIVHSRT---------------K------NPE-EITRQADIIISAVGQP- 296 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~-gAtVtv~hs~t---------------~------~L~-~~l~~ADIVIsAvG~p- 296 (375)
..++|.|+|+++.+|+-+..+|.++ +.+|+...++. . +++ +.++++|+||.|.|.-
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~~ 116 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHGT 116 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCHHH
Confidence 5579999999999999999999988 67887765431 0 111 1247799999999852
Q ss_pred --CcccCCCcCCCcEEEEeeecCC
Q 017184 297 --NMVRGSWIKPGAVIIDVGINPV 318 (375)
Q Consensus 297 --~~I~~~~vk~gavVIDvgin~~ 318 (375)
++++. + +.|..|||++-...
T Consensus 117 s~~i~~~-~-~~g~~VIDlSs~fR 138 (381)
T PLN02968 117 TQEIIKA-L-PKDLKIVDLSADFR 138 (381)
T ss_pred HHHHHHH-H-hCCCEEEEcCchhc
Confidence 23443 3 67899999996654
No 268
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=94.72 E-value=0.042 Score=51.62 Aligned_cols=37 Identities=22% Similarity=0.316 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 38 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKS 38 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999888999999999999999988765
No 269
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=94.72 E-value=0.098 Score=50.04 Aligned_cols=92 Identities=22% Similarity=0.320 Sum_probs=62.0
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCe-EEEEcCCC-----------------CCH----H
Q 017184 223 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSRT-----------------KNP----E 280 (375)
Q Consensus 223 PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAt-Vtv~hs~t-----------------~~L----~ 280 (375)
+|....++..+++.+. ..|++|+|+|.|. +|..+++++...|++ |+++.+.. .+. .
T Consensus 103 ~~~~~ta~~al~~~~~-~~g~~VlV~G~G~-vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~ 180 (280)
T TIGR03366 103 GCATATVMAALEAAGD-LKGRRVLVVGAGM-LGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEVLAERQG 180 (280)
T ss_pred hhHHHHHHHHHHhccC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchhhHHHHH
Confidence 3433444455555544 3899999999976 699999999899986 77664321 111 1
Q ss_pred hhc--cCCcEEEEccCCCCccc--CCCcCCCcEEEEeeec
Q 017184 281 EIT--RQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 316 (375)
Q Consensus 281 ~~l--~~ADIVIsAvG~p~~I~--~~~vk~gavVIDvgin 316 (375)
+.+ +.+|++|-++|.+..+. -+.++++..++.+|..
T Consensus 181 ~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~ 220 (280)
T TIGR03366 181 GLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSV 220 (280)
T ss_pred HHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccC
Confidence 112 34899999999775432 3577888889999953
No 270
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.70 E-value=0.054 Score=50.63 Aligned_cols=38 Identities=29% Similarity=0.429 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.+++||+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~ 48 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG 48 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999999999999999999999999888654
No 271
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=94.70 E-value=0.1 Score=53.64 Aligned_cols=76 Identities=22% Similarity=0.370 Sum_probs=56.1
Q ss_pred cCCHHHHHHHHHHh---CCCCCCCEEEEEcCC----------------cccHHHHHHHHhhCCCeEEEEcCCC-------
Q 017184 223 PCTPKGCIELLHRY---GFDIKGKRAVVIGRS----------------NIVGMPAALLLQREDATVSIVHSRT------- 276 (375)
Q Consensus 223 PcT~~gvi~lL~~~---~i~l~GK~vvVIGrs----------------~~VGkpla~lL~~~gAtVtv~hs~t------- 276 (375)
++++..++..+.+. +-+++||+|+|-|.+ |-+|.++|..|..+||+|+++++..
T Consensus 163 ~~~~~~i~~~v~~~~~~~~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~~~~ 242 (390)
T TIGR00521 163 LAEPETIVKAAEREFSPKEDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLTPPG 242 (390)
T ss_pred CCCHHHHHHHHHHHHhhccccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCCCCC
Confidence 66777776666643 246999999999873 3469999999999999999987542
Q ss_pred ---------CCH-H----hhccCCcEEEEccCCCCc
Q 017184 277 ---------KNP-E----EITRQADIIISAVGQPNM 298 (375)
Q Consensus 277 ---------~~L-~----~~l~~ADIVIsAvG~p~~ 298 (375)
.++ + +...+.|++|.+++...+
T Consensus 243 ~~~~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~ 278 (390)
T TIGR00521 243 VKSIKVSTAEEMLEAALNELAKDFDIFISAAAVADF 278 (390)
T ss_pred cEEEEeccHHHHHHHHHHhhcccCCEEEEccccccc
Confidence 123 2 233568999999997655
No 272
>PRK07063 short chain dehydrogenase; Provisional
Probab=94.68 E-value=0.033 Score=52.02 Aligned_cols=37 Identities=30% Similarity=0.418 Sum_probs=33.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~ 40 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLD 40 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999889999999999999999988764
No 273
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=94.68 E-value=0.14 Score=50.98 Aligned_cols=139 Identities=21% Similarity=0.280 Sum_probs=92.5
Q ss_pred HHHHHHHHcCCeEEEEeC-----CCCCCHHHHHHHHHHhhcCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccccch
Q 017184 134 NKKKACQSVGINSFEVHL-----PEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLN 208 (375)
Q Consensus 134 ~k~k~a~~~GI~~~~~~l-----~~~vs~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N 208 (375)
+=.-++..+|-+..++.= ...-+-+|-...+.++ +|||++--. .| ..++.+.-.-.| -..|
T Consensus 61 SFeva~~qlGg~~~~l~~~~~Qlgr~Esi~DTArVLsr~-----~D~I~~R~~--~~----~~ve~lA~~s~V---PViN 126 (310)
T COG0078 61 SFEVAATQLGGHAIYLGPGDSQLGRGESIKDTARVLSRM-----VDAIMIRGF--SH----ETLEELAKYSGV---PVIN 126 (310)
T ss_pred hHHHHHHHcCCCeEEeCCCccccCCCCcHHHHHHHHHhh-----hheEEEecc--cH----HHHHHHHHhCCC---ceEc
Confidence 334567889999877652 1111223444444443 889988644 22 222323222122 2223
Q ss_pred hhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC-------------
Q 017184 209 IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR------------- 275 (375)
Q Consensus 209 ~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~------------- 275 (375)
+.++.+.||-..|=+--++++.-.++|++++=+|-|+.|+..+....+..|.+|+++.-+
T Consensus 127 -------gLtD~~HP~Q~LADl~Ti~E~~g~l~g~k~a~vGDgNNv~nSl~~~~a~~G~dv~ia~Pk~~~p~~~~~~~a~ 199 (310)
T COG0078 127 -------GLTDEFHPCQALADLMTIKEHFGSLKGLKLAYVGDGNNVANSLLLAAAKLGMDVRIATPKGYEPDPEVVEKAK 199 (310)
T ss_pred -------ccccccCcHHHHHHHHHHHHhcCcccCcEEEEEcCcchHHHHHHHHHHHhCCeEEEECCCcCCcCHHHHHHHH
Confidence 235678899999965555555555999999999999999999988888899999998532
Q ss_pred ------------CCCHHhhccCCcEEEEcc
Q 017184 276 ------------TKNPEEITRQADIIISAV 293 (375)
Q Consensus 276 ------------t~~L~~~l~~ADIVIsAv 293 (375)
|.|..+.++.||+|.+-+
T Consensus 200 ~~a~~~g~~i~~t~d~~eAv~gADvvyTDv 229 (310)
T COG0078 200 ENAKESGGKITLTEDPEEAVKGADVVYTDV 229 (310)
T ss_pred HHHHhcCCeEEEecCHHHHhCCCCEEEecC
Confidence 458889999999999655
No 274
>PRK01368 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.67 E-value=0.089 Score=54.81 Aligned_cols=119 Identities=15% Similarity=0.130 Sum_probs=68.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCc-CCCcEEEEeeecCCC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWI-KPGAVIIDVGINPVE 319 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~v-k~gavVIDvgin~~~ 319 (375)
.||+|+|+|.|.. |++++.+|. +|++|++.+.+.....+.-+.-+..+ .|. + +.+.+ ....+|+-=|+++..
T Consensus 5 ~~~~v~v~G~G~s-G~a~~~~L~-~g~~v~v~D~~~~~~~~~~~~~~~~~--~~~-~--~~~~~~~~d~vV~SPgI~~~~ 77 (454)
T PRK01368 5 TKQKIGVFGLGKT-GISVYEELQ-NKYDVIVYDDLKANRDIFEELYSKNA--IAA-L--SDSRWQNLDKIVLSPGIPLTH 77 (454)
T ss_pred CCCEEEEEeecHH-HHHHHHHHh-CCCEEEEECCCCCchHHHHhhhcCce--ecc-C--ChhHhhCCCEEEECCCCCCCC
Confidence 5899999999998 999999998 59999999865433221100001111 111 0 01111 223455555555421
Q ss_pred CCC----CCCCceeecccchhh-hhhhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017184 320 DAK----SPRGYRLVGDVCYEE-ACEVASAITPVPGGVGPMTIAMLLSNTLTSA 368 (375)
Q Consensus 320 ~~~----~~~g~kl~GDVd~~~-v~~~a~~iTPVPGGVGp~T~amLl~N~v~a~ 368 (375)
+. ...|-++++++++-. ..+. ..+--|-|--|.-|+.-|+.++++.+
T Consensus 78 -p~~~~a~~~gi~v~~e~el~~~~~~~-~~~IaVTGTnGKTTTt~ll~~iL~~~ 129 (454)
T PRK01368 78 -EIVKIAKNFNIPITSDIDLLFEKSKN-LKFIAITGTNGKSTTTALISHILNSN 129 (454)
T ss_pred -HHHHHHHHCCCceecHHHHHHHHhcC-CCEEEEECCCcHHHHHHHHHHHHHhc
Confidence 10 012336888887631 1111 11223568899999999999998764
No 275
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=94.66 E-value=0.039 Score=51.51 Aligned_cols=39 Identities=33% Similarity=0.434 Sum_probs=34.9
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
..+++||+++|.|+++.+|..++..|+++|++|+++.++
T Consensus 7 ~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~ 45 (259)
T PRK08213 7 LFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARK 45 (259)
T ss_pred hhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 345789999999999999999999999999999998765
No 276
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.65 E-value=0.027 Score=53.12 Aligned_cols=77 Identities=21% Similarity=0.409 Sum_probs=53.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcCC------------------------------------------
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR------------------------------------------ 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs~------------------------------------------ 275 (375)
.|++++|+|+|.|++ |..++..|...|. ++++++..
T Consensus 18 ~L~~~~VlivG~Ggl-Gs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~ 96 (228)
T cd00757 18 KLKNARVLVVGAGGL-GSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY 96 (228)
T ss_pred HHhCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 468899999999996 9999999999996 77777321
Q ss_pred -----CCCHHhhccCCcEEEEccCCCCc---ccCCCcCCCcEEEEeeec
Q 017184 276 -----TKNPEEITRQADIIISAVGQPNM---VRGSWIKPGAVIIDVGIN 316 (375)
Q Consensus 276 -----t~~L~~~l~~ADIVIsAvG~p~~---I~~~~vk~gavVIDvgin 316 (375)
..++.+.++++|+||.++..+.. +..-..+.+.-+|+.|+.
T Consensus 97 ~~~i~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~ip~i~~g~~ 145 (228)
T cd00757 97 NERLDAENAEELIAGYDLVLDCTDNFATRYLINDACVKLGKPLVSGAVL 145 (228)
T ss_pred cceeCHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEEec
Confidence 01234577889999999886542 332223344555666543
No 277
>PRK06172 short chain dehydrogenase; Provisional
Probab=94.65 E-value=0.034 Score=51.67 Aligned_cols=38 Identities=32% Similarity=0.446 Sum_probs=34.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
+++||+++|.|+++-+|+.++..|+++|++|.+..|+.
T Consensus 4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~ 41 (253)
T PRK06172 4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDA 41 (253)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 47899999999999999999999999999999887753
No 278
>PRK05717 oxidoreductase; Validated
Probab=94.64 E-value=0.039 Score=51.46 Aligned_cols=39 Identities=23% Similarity=0.241 Sum_probs=34.7
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
...++||+++|.|.++-+|+.++..|+++|++|+++.+.
T Consensus 5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~ 43 (255)
T PRK05717 5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLD 43 (255)
T ss_pred CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCC
Confidence 467899999999999889999999999999999988543
No 279
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=94.63 E-value=0.08 Score=48.89 Aligned_cols=38 Identities=26% Similarity=0.321 Sum_probs=33.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.++++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~ 41 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA 41 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 45789999999999888999999999999999888654
No 280
>PRK08628 short chain dehydrogenase; Provisional
Probab=94.62 E-value=0.053 Score=50.52 Aligned_cols=39 Identities=26% Similarity=0.354 Sum_probs=34.8
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++++||+++|+|+++-+|+.++..|+++|+.|+++.+.
T Consensus 2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~ 40 (258)
T PRK08628 2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRS 40 (258)
T ss_pred CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCC
Confidence 467899999999999989999999999999998887654
No 281
>PRK08265 short chain dehydrogenase; Provisional
Probab=94.61 E-value=0.042 Score=51.71 Aligned_cols=38 Identities=32% Similarity=0.457 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
+++||+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (261)
T PRK08265 3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDA 40 (261)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 47899999999988889999999999999999987653
No 282
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=94.59 E-value=0.62 Score=48.29 Aligned_cols=160 Identities=21% Similarity=0.280 Sum_probs=100.1
Q ss_pred HHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhhcCCCccEEEEeCCCCC---C---CCHHHHHhhCCcccccCccc
Q 017184 132 VRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPC---H---IDEQSILNAVSMEKDVDGFH 205 (375)
Q Consensus 132 v~~k~k~a~~~GI~~~~~~l~~~vs~~el~~~I~~LN~D~~V~GIlVqlPLp~---~---i~~~~i~~~I~p~KDVDGl~ 205 (375)
++--...|+++||+ +.+.|+..|.-|. +++.+|=|. | +|.-.+ -.-+++..... .
T Consensus 229 aNElali~~~~GId--------------vwevIeaAnt~P~---~~~~~PGpGvGGHCIpvDP~fl-~~ka~~yg~~~-r 289 (436)
T COG0677 229 ANELALICNAMGID--------------VWEVIEAANTKPR---VNIFYPGPGVGGHCIPVDPYFL-TWKAPEYGLPA-R 289 (436)
T ss_pred HHHHHHHHHHhCCc--------------HHHHHHHhccCCc---eeecCCCCCCCCcccccCchhe-eecccccCCch-H
Confidence 44456678888877 4568888998886 778888664 1 222211 11222221110 0
Q ss_pred cchhhhcccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCC---------cccHHHHHHHHhhCCCeEEEEcCC-
Q 017184 206 PLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRS---------NIVGMPAALLLQREDATVSIVHSR- 275 (375)
Q Consensus 206 ~~N~G~l~~g~~~~~~~PcT~~gvi~lL~~~~i~l~GK~vvVIGrs---------~~VGkpla~lL~~~gAtVtv~hs~- 275 (375)
..-+.+.. ++..+.| ...-+.+.|.+.+..++|.+|+|+|-. +.=..-+..+|.+.|++|.++.-+
T Consensus 290 lI~tAreI-N~~mP~~---Vv~~~~~al~~~~k~~~~skIlvlGlayK~dvdD~ReSPa~~ii~~l~~~g~~v~~~DP~v 365 (436)
T COG0677 290 LIRTAREI-NDSMPRH---VVDRVKEALNKAGKPLSGSKILVLGLAYKGDVDDLRESPALDIIELLEEWGGEVLVYDPYV 365 (436)
T ss_pred HHHHHHHH-hccCCHH---HHHHHHHHHHHcCCCCcCceEEEEEeeecCCCcccccCchHHHHHHHHHhCCeEEEECCCC
Confidence 11122222 1112222 123345566689999999999999942 112456788899999999988533
Q ss_pred ------------C-CCHHhhccCCcEEEEccCCCCc--ccCCCcC-CCcEEEEee
Q 017184 276 ------------T-KNPEEITRQADIIISAVGQPNM--VRGSWIK-PGAVIIDVG 314 (375)
Q Consensus 276 ------------t-~~L~~~l~~ADIVIsAvG~p~~--I~~~~vk-~gavVIDvg 314 (375)
+ ..+++.++.+|+||.++-...| ++.+.+. ...+|||.-
T Consensus 366 ~~~~~~~~~~~~~~~~~e~al~~~D~vVi~tDH~~fk~id~~~i~~~~~vivDtr 420 (436)
T COG0677 366 KELPTREDGEGVTLAILEEALKDADAVVIATDHSEFKEIDYEAIGKEAKVIVDTR 420 (436)
T ss_pred CcchhhhhccccchhhHHHHhccCCEEEEEeccHHhhcCCHHHhccCCcEEEECc
Confidence 2 4577899999999999998877 7777664 466889853
No 283
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.57 E-value=0.077 Score=49.84 Aligned_cols=38 Identities=18% Similarity=0.110 Sum_probs=32.2
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
-+.++|+++|+|+++-+|+.++..|+++|++|+...|+
T Consensus 13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~ 50 (251)
T PLN00141 13 ENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRD 50 (251)
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecC
Confidence 34578999999998888999999999999998876543
No 284
>PRK12937 short chain dehydrogenase; Provisional
Probab=94.53 E-value=0.098 Score=47.99 Aligned_cols=37 Identities=24% Similarity=0.280 Sum_probs=32.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||+++|.|.++-+|+.++..|+++|++|+++.++
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~ 38 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAG 38 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCC
Confidence 4689999999998889999999999999998877543
No 285
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=94.50 E-value=0.076 Score=52.16 Aligned_cols=53 Identities=15% Similarity=0.260 Sum_probs=43.4
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------------------------------CCHHhhcc
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------------------KNPEEITR 284 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------------------------------~~L~~~l~ 284 (375)
++|.|||.|. +|.+++..|++.|.+|++++++. .++.+.++
T Consensus 3 ~~V~VIG~G~-mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~~ 81 (308)
T PRK06129 3 GSVAIIGAGL-IGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAVA 81 (308)
T ss_pred cEEEEECccH-HHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhhC
Confidence 4799999877 59999999999999999997642 24456678
Q ss_pred CCcEEEEccCCC
Q 017184 285 QADIIISAVGQP 296 (375)
Q Consensus 285 ~ADIVIsAvG~p 296 (375)
++|+||.+++..
T Consensus 82 ~ad~Vi~avpe~ 93 (308)
T PRK06129 82 DADYVQESAPEN 93 (308)
T ss_pred CCCEEEECCcCC
Confidence 999999998754
No 286
>PRK06182 short chain dehydrogenase; Validated
Probab=94.49 E-value=0.065 Score=50.62 Aligned_cols=35 Identities=31% Similarity=0.254 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
++|+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~ 36 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARR 36 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 58999999998888999999999999999988765
No 287
>PRK06057 short chain dehydrogenase; Provisional
Probab=94.45 E-value=0.051 Score=50.69 Aligned_cols=37 Identities=30% Similarity=0.399 Sum_probs=33.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
++||+++|+|+++-+|+.++..|+++|++|+++.++.
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~ 41 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDP 41 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 7899999999988899999999999999999887653
No 288
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.45 E-value=0.072 Score=48.78 Aligned_cols=37 Identities=35% Similarity=0.531 Sum_probs=32.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
++++|+++|.|+++-+|+.++..|+++|+.|++..++
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~ 39 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTR 39 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence 5689999999998889999999999999988776544
No 289
>PRK06179 short chain dehydrogenase; Provisional
Probab=94.44 E-value=0.047 Score=51.28 Aligned_cols=35 Identities=29% Similarity=0.217 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~ 37 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRN 37 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999999999999999999999999988765
No 290
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=94.44 E-value=0.1 Score=51.66 Aligned_cols=53 Identities=28% Similarity=0.465 Sum_probs=41.5
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcCC--------------------------CCCHHhhccCCcEEEEccCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR--------------------------TKNPEEITRQADIIISAVGQ 295 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs~--------------------------t~~L~~~l~~ADIVIsAvG~ 295 (375)
++|.|||.|. ||..+|..|+.+|. +|++++.. +.++++ +++||+||.++|.
T Consensus 2 ~KV~VIGaG~-vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag~ 79 (305)
T TIGR01763 2 KKISVIGAGF-VGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAGL 79 (305)
T ss_pred CEEEEECcCH-HHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCCC
Confidence 4799999977 59999999998874 78887642 234444 7999999999996
Q ss_pred CC
Q 017184 296 PN 297 (375)
Q Consensus 296 p~ 297 (375)
|.
T Consensus 80 p~ 81 (305)
T TIGR01763 80 PR 81 (305)
T ss_pred CC
Confidence 53
No 291
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=94.38 E-value=0.09 Score=53.87 Aligned_cols=71 Identities=24% Similarity=0.336 Sum_probs=51.0
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------------------------CCHHhhccCCcEEEE
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------------KNPEEITRQADIIIS 291 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------------------------~~L~~~l~~ADIVIs 291 (375)
+|.|||.|.+ |.|+|.+|+ .|.+|+.++++. .+..+..++||+||.
T Consensus 2 kI~VIGlGyv-Gl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vii 79 (388)
T PRK15057 2 KITISGTGYV-GLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVII 79 (388)
T ss_pred EEEEECCCHH-HHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEEE
Confidence 6899999884 999998777 489999997541 123445689999999
Q ss_pred ccCCCC----------ccc------CCCcCCCcEEEEeeecC
Q 017184 292 AVGQPN----------MVR------GSWIKPGAVIIDVGINP 317 (375)
Q Consensus 292 AvG~p~----------~I~------~~~vk~gavVIDvgin~ 317 (375)
+++.|- .+. .. +++|.+||+-.+-+
T Consensus 80 ~Vpt~~~~k~~~~dl~~v~~v~~~i~~-~~~g~lVV~~STv~ 120 (388)
T PRK15057 80 ATPTDYDPKTNYFNTSSVESVIKDVVE-INPYAVMVIKSTVP 120 (388)
T ss_pred eCCCCCccCCCCcChHHHHHHHHHHHh-cCCCCEEEEeeecC
Confidence 999761 111 12 47788888766544
No 292
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=94.38 E-value=0.059 Score=52.34 Aligned_cols=32 Identities=28% Similarity=0.338 Sum_probs=28.9
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
++|.|||.|.+ |.+++..|++.|..|++++++
T Consensus 4 ~~I~ViGaG~m-G~~iA~~la~~G~~V~l~d~~ 35 (291)
T PRK06035 4 KVIGVVGSGVM-GQGIAQVFARTGYDVTIVDVS 35 (291)
T ss_pred cEEEEECccHH-HHHHHHHHHhcCCeEEEEeCC
Confidence 68999999885 999999999999999998754
No 293
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=94.38 E-value=0.079 Score=52.07 Aligned_cols=56 Identities=14% Similarity=0.156 Sum_probs=42.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCC--CeEEEEcCCCC-------------------------CHHhhccCCcEEEEc
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQRED--ATVSIVHSRTK-------------------------NPEEITRQADIIISA 292 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~g--AtVtv~hs~t~-------------------------~L~~~l~~ADIVIsA 292 (375)
++||+++|.|+++.+|+.++..|+++| ++|+++.+... ++.+.+++.|+||..
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~ 81 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHA 81 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence 579999999999999999999999886 68887754321 123445667888877
Q ss_pred cCC
Q 017184 293 VGQ 295 (375)
Q Consensus 293 vG~ 295 (375)
+|.
T Consensus 82 Ag~ 84 (324)
T TIGR03589 82 AAL 84 (324)
T ss_pred ccc
Confidence 764
No 294
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.37 E-value=0.12 Score=50.07 Aligned_cols=36 Identities=25% Similarity=0.117 Sum_probs=31.6
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
-+||+|+|.|+++.+|+.++..|+++|.+|+.+.|+
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRD 38 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 468999999999999999999999999999866443
No 295
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=94.33 E-value=0.047 Score=54.05 Aligned_cols=58 Identities=29% Similarity=0.509 Sum_probs=43.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEE----------------cCCC----------CCHHhhccCCcEEEEc
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV----------------HSRT----------KNPEEITRQADIIISA 292 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~----------------hs~t----------~~L~~~l~~ADIVIsA 292 (375)
.-.+.+|.|+|+++-+|+|++++|. .+--|+-. |-.| +.|++.++.||+||-+
T Consensus 25 ~~~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIP 103 (345)
T KOG1494|consen 25 SQRGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIP 103 (345)
T ss_pred ccCcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEec
Confidence 3467899999999989999998765 44333332 2222 4689999999999999
Q ss_pred cCCCC
Q 017184 293 VGQPN 297 (375)
Q Consensus 293 vG~p~ 297 (375)
+|.|.
T Consensus 104 AGVPR 108 (345)
T KOG1494|consen 104 AGVPR 108 (345)
T ss_pred CCCCC
Confidence 99654
No 296
>PRK12829 short chain dehydrogenase; Provisional
Probab=94.32 E-value=0.07 Score=49.54 Aligned_cols=37 Identities=22% Similarity=0.321 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
++++|+++|+|+++.+|+.++..|+++|++|+++.++
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~ 44 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVS 44 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999999999999999999999888764
No 297
>PRK06125 short chain dehydrogenase; Provisional
Probab=94.31 E-value=0.059 Score=50.38 Aligned_cols=38 Identities=26% Similarity=0.439 Sum_probs=33.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.+++||+++|.|.++-+|+.++..|+++|++|+++.++
T Consensus 3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~ 40 (259)
T PRK06125 3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARD 40 (259)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 35789999999998888999999999999999998765
No 298
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.31 E-value=0.093 Score=48.35 Aligned_cols=35 Identities=31% Similarity=0.420 Sum_probs=31.5
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
||+++|.|+++.+|+.++..|+++|++|+++.|+.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~ 35 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGE 35 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 57899999999999999999999999999987753
No 299
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=94.31 E-value=0.045 Score=54.78 Aligned_cols=76 Identities=20% Similarity=0.212 Sum_probs=51.8
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCC---eEEEEcCCC---------------CCHH-hhccCCcEEEEccCCCC--ccc
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDA---TVSIVHSRT---------------KNPE-EITRQADIIISAVGQPN--MVR 300 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gA---tVtv~hs~t---------------~~L~-~~l~~ADIVIsAvG~p~--~I~ 300 (375)
+++|.|+|+++.+|+-+..+|.+++. ++....+.. .++. ..+..+|+||.|+|.-. -+-
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~~~~~vDvVf~A~g~g~s~~~~ 80 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTFDFSGVDIALFSAGGSVSKKYA 80 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHHHHcCCCEEEECCChHHHHHHH
Confidence 46899999999999999999998764 344443321 0111 22468999999997531 122
Q ss_pred CCCcCCCcEEEEeeecC
Q 017184 301 GSWIKPGAVIIDVGINP 317 (375)
Q Consensus 301 ~~~vk~gavVIDvgin~ 317 (375)
+..++.|++|||.+-.+
T Consensus 81 ~~~~~~G~~VIDlS~~~ 97 (334)
T PRK14874 81 PKAAAAGAVVIDNSSAF 97 (334)
T ss_pred HHHHhCCCEEEECCchh
Confidence 23456789999998654
No 300
>PRK05872 short chain dehydrogenase; Provisional
Probab=94.30 E-value=0.043 Score=52.98 Aligned_cols=39 Identities=26% Similarity=0.329 Sum_probs=34.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
.+++||+++|.|+++-+|+.++..|.++|++|+++.++.
T Consensus 5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~ 43 (296)
T PRK05872 5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEE 43 (296)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 357899999999988899999999999999999887653
No 301
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.29 E-value=0.048 Score=51.25 Aligned_cols=40 Identities=28% Similarity=0.357 Sum_probs=35.4
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
..+++||+++|.|.++-+|+.++..|+.+|++|.+..+..
T Consensus 5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~ 44 (265)
T PRK07097 5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQ 44 (265)
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4578999999999999999999999999999998886653
No 302
>PRK09242 tropinone reductase; Provisional
Probab=94.29 E-value=0.042 Score=51.22 Aligned_cols=38 Identities=26% Similarity=0.366 Sum_probs=34.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.+++||+++|.|+++-+|+.++..|.++|++|+++.++
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~ 42 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARD 42 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 46789999999998888999999999999999988654
No 303
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=94.28 E-value=0.079 Score=49.40 Aligned_cols=36 Identities=17% Similarity=0.268 Sum_probs=31.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 274 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs 274 (375)
-.|+.++|+|+|.|+. |..++..|.+.|. ++++++.
T Consensus 17 ~~L~~~~V~IvG~Ggl-Gs~ia~~La~~Gvg~i~lvD~ 53 (200)
T TIGR02354 17 QKLEQATVAICGLGGL-GSNVAINLARAGIGKLILVDF 53 (200)
T ss_pred HHHhCCcEEEECcCHH-HHHHHHHHHHcCCCEEEEECC
Confidence 3568899999999996 9999999999997 7888853
No 304
>PRK07890 short chain dehydrogenase; Provisional
Probab=94.28 E-value=0.056 Score=50.11 Aligned_cols=36 Identities=31% Similarity=0.335 Sum_probs=32.8
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++|+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~ 38 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAART 38 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 578999999999999999999999999999888654
No 305
>PRK06223 malate dehydrogenase; Reviewed
Probab=94.28 E-value=0.12 Score=50.59 Aligned_cols=53 Identities=28% Similarity=0.424 Sum_probs=41.6
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcCC--------------------------CCCHHhhccCCcEEEEccCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR--------------------------TKNPEEITRQADIIISAVGQ 295 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs~--------------------------t~~L~~~l~~ADIVIsAvG~ 295 (375)
++|.|||+|. ||..++..|+..|. +|.+++.. +.+. +.+++||+||.++|.
T Consensus 3 ~KI~VIGaG~-vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~~ 80 (307)
T PRK06223 3 KKISIIGAGN-VGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAGV 80 (307)
T ss_pred CEEEEECCCH-HHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCCC
Confidence 5899999966 59999999998764 88888643 1234 458999999999987
Q ss_pred CC
Q 017184 296 PN 297 (375)
Q Consensus 296 p~ 297 (375)
|.
T Consensus 81 p~ 82 (307)
T PRK06223 81 PR 82 (307)
T ss_pred CC
Confidence 64
No 306
>PRK08703 short chain dehydrogenase; Provisional
Probab=94.25 E-value=0.071 Score=49.16 Aligned_cols=38 Identities=26% Similarity=0.275 Sum_probs=34.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
+++||+++|.|.++-+|+.++..|+++|++|+++.|+.
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~ 40 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQ 40 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCh
Confidence 47899999999999999999999999999999887764
No 307
>PRK07060 short chain dehydrogenase; Provisional
Probab=94.24 E-value=0.062 Score=49.31 Aligned_cols=39 Identities=31% Similarity=0.455 Sum_probs=34.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
.+++||+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~ 43 (245)
T PRK07060 5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNA 43 (245)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 457899999999988889999999999999999887753
No 308
>PRK09291 short chain dehydrogenase; Provisional
Probab=94.22 E-value=0.075 Score=49.23 Aligned_cols=34 Identities=24% Similarity=0.211 Sum_probs=30.7
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+|+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~ 35 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQI 35 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6889999999999999999999999999887664
No 309
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=94.22 E-value=0.064 Score=58.70 Aligned_cols=73 Identities=32% Similarity=0.373 Sum_probs=55.3
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCC--CeEEEEcCCC----------------CCHHhhccCCcEEEEccCCCCc---cc-
Q 017184 243 KRAVVIGRSNIVGMPAALLLQRED--ATVSIVHSRT----------------KNPEEITRQADIIISAVGQPNM---VR- 300 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~g--AtVtv~hs~t----------------~~L~~~l~~ADIVIsAvG~p~~---I~- 300 (375)
++|.|||.|.+ |..++..|.+.| ..|++++++. .++.+.+.++|+||.+++...+ +.
T Consensus 4 ~~I~IIG~G~m-G~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~~ 82 (735)
T PRK14806 4 GRVVVIGLGLI-GGSFAKALRERGLAREVVAVDRRAKSLELAVSLGVIDRGEEDLAEAVSGADVIVLAVPVLAMEKVLAD 82 (735)
T ss_pred cEEEEEeeCHH-HHHHHHHHHhcCCCCEEEEEECChhHHHHHHHCCCCCcccCCHHHHhcCCCEEEECCCHHHHHHHHHH
Confidence 68999999885 999999999888 4788887652 2455668899999999984321 21
Q ss_pred -CCCcCCCcEEEEeeec
Q 017184 301 -GSWIKPGAVIIDVGIN 316 (375)
Q Consensus 301 -~~~vk~gavVIDvgin 316 (375)
...++++.+|+|++..
T Consensus 83 l~~~~~~~~ii~d~~sv 99 (735)
T PRK14806 83 LKPLLSEHAIVTDVGST 99 (735)
T ss_pred HHHhcCCCcEEEEcCCC
Confidence 1356788999999853
No 310
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.20 E-value=0.12 Score=51.92 Aligned_cols=72 Identities=21% Similarity=0.154 Sum_probs=52.5
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC----------------------------------CCCHHhhccCCcE
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------------------------TKNPEEITRQADI 288 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~----------------------------------t~~L~~~l~~ADI 288 (375)
|+|.|||.|-+ |..+|..++..|.+|++.+.. +.++++.+.+||+
T Consensus 8 ~~VaVIGaG~M-G~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDl 86 (321)
T PRK07066 8 KTFAAIGSGVI-GSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADF 86 (321)
T ss_pred CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCE
Confidence 68999999875 999999999999999998643 2356678899999
Q ss_pred EEEccCCCCcccC-------CCcCCCcEEEEeeec
Q 017184 289 IISAVGQPNMVRG-------SWIKPGAVIIDVGIN 316 (375)
Q Consensus 289 VIsAvG~p~~I~~-------~~vk~gavVIDvgin 316 (375)
||-++...--++. +..++++ ||+--++
T Consensus 87 ViEavpE~l~vK~~lf~~l~~~~~~~a-IlaSnTS 120 (321)
T PRK07066 87 IQESAPEREALKLELHERISRAAKPDA-IIASSTS 120 (321)
T ss_pred EEECCcCCHHHHHHHHHHHHHhCCCCe-EEEECCC
Confidence 9999874221222 2346665 5554433
No 311
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=94.20 E-value=0.065 Score=51.35 Aligned_cols=34 Identities=18% Similarity=0.464 Sum_probs=29.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEc
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVH 273 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~h 273 (375)
.+++++|+|+|.|++ |.+++..|...|. ++++++
T Consensus 21 ~L~~~~VlvvG~Ggl-Gs~va~~La~~Gvg~i~lvD 55 (240)
T TIGR02355 21 ALKASRVLIVGLGGL-GCAASQYLAAAGVGNLTLLD 55 (240)
T ss_pred HHhCCcEEEECcCHH-HHHHHHHHHHcCCCEEEEEe
Confidence 468899999999996 9999999999995 788874
No 312
>PRK09186 flagellin modification protein A; Provisional
Probab=94.18 E-value=0.055 Score=50.12 Aligned_cols=36 Identities=17% Similarity=0.314 Sum_probs=32.6
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~ 37 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADID 37 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecC
Confidence 579999999999889999999999999999888664
No 313
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=94.18 E-value=0.13 Score=51.17 Aligned_cols=93 Identities=22% Similarity=0.292 Sum_probs=62.0
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCC---------------------HHh
Q 017184 223 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------------PEE 281 (375)
Q Consensus 223 PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~---------------------L~~ 281 (375)
+|........+...+....|.+++|.|.|. +|..+++++...|+.|+++.+.... +.+
T Consensus 162 ~~~~~ta~~al~~~~~~~~g~~vlV~G~G~-vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~ 240 (357)
T PLN02514 162 LCAGVTVYSPLSHFGLKQSGLRGGILGLGG-VGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQE 240 (357)
T ss_pred hhhHHHHHHHHHHcccCCCCCeEEEEcccH-HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHH
Confidence 344344445555555555799999999866 6999999999999987665432111 122
Q ss_pred hccCCcEEEEccCCCCccc--CCCcCCCcEEEEeeec
Q 017184 282 ITRQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 316 (375)
Q Consensus 282 ~l~~ADIVIsAvG~p~~I~--~~~vk~gavVIDvgin 316 (375)
.+...|++|.++|.+..+. -+.++++..++.+|..
T Consensus 241 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~ 277 (357)
T PLN02514 241 AADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVI 277 (357)
T ss_pred hcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCC
Confidence 2345799999998654332 2567888888889864
No 314
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=94.17 E-value=0.12 Score=48.42 Aligned_cols=36 Identities=28% Similarity=0.314 Sum_probs=32.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 274 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs 274 (375)
+++||.++|.|.++-+|+.++..|+++|++|..+++
T Consensus 7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~ 42 (253)
T PRK08993 7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINI 42 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecC
Confidence 578999999999988999999999999999887654
No 315
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.16 E-value=0.11 Score=51.19 Aligned_cols=36 Identities=25% Similarity=0.228 Sum_probs=32.1
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
++||+++|.|+++.+|+.++..|+++|++|+++.++
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~ 37 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLD 37 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCC
Confidence 478999999998888999999999999999887643
No 316
>PRK08264 short chain dehydrogenase; Validated
Probab=94.13 E-value=0.071 Score=48.90 Aligned_cols=38 Identities=29% Similarity=0.293 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcCCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT 276 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs~t 276 (375)
++.+|+++|+|+++-+|+.++..|+++|+ +|+++.|..
T Consensus 3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~ 41 (238)
T PRK08264 3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDP 41 (238)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecCh
Confidence 46889999999988899999999999999 999888754
No 317
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=94.13 E-value=0.078 Score=53.36 Aligned_cols=36 Identities=22% Similarity=0.395 Sum_probs=31.2
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 274 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs 274 (375)
-.|++++|+|||.|+. |.+++..|.+.|. ++++++.
T Consensus 20 ~~L~~~~VlIiG~Ggl-Gs~va~~La~aGvg~i~lvD~ 56 (338)
T PRK12475 20 RKIREKHVLIVGAGAL-GAANAEALVRAGIGKLTIADR 56 (338)
T ss_pred HhhcCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEcC
Confidence 4578999999999995 9999999999996 7887754
No 318
>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.12 E-value=0.12 Score=54.00 Aligned_cols=122 Identities=19% Similarity=0.270 Sum_probs=74.0
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC-CHHh--hccCCcEEEEccCCCCcccCCCc-CCCcEEEEeee
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-NPEE--ITRQADIIISAVGQPNMVRGSWI-KPGAVIIDVGI 315 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~-~L~~--~l~~ADIVIsAvG~p~~I~~~~v-k~gavVIDvgi 315 (375)
++||+|+|+|.|.. |++++.+|.++|+.|++...+.. +..+ .+++ ++.....+.. .+.+ ....+|+--|+
T Consensus 6 ~~~~~v~v~G~G~s-G~~~~~~l~~~g~~v~~~d~~~~~~~~~~~~l~~-~~~~~~~~~~----~~~~~~~d~vV~SpgI 79 (468)
T PRK04690 6 LEGRRVALWGWGRE-GRAAYRALRAHLPAQALTLFCNAVEAREVGALAD-AALLVETEAS----AQRLAAFDVVVKSPGI 79 (468)
T ss_pred cCCCEEEEEccchh-hHHHHHHHHHcCCEEEEEcCCCcccchHHHHHhh-cCEEEeCCCC----hHHccCCCEEEECCCC
Confidence 47999999999998 99999999999999999885432 2221 2333 3322222221 1222 23456666666
Q ss_pred cCCCCCC----CCCCceeecccch--hhhhh-h--cceeccCCCCccHHHHHHHHHHHHHHH
Q 017184 316 NPVEDAK----SPRGYRLVGDVCY--EEACE-V--ASAITPVPGGVGPMTIAMLLSNTLTSA 368 (375)
Q Consensus 316 n~~~~~~----~~~g~kl~GDVd~--~~v~~-~--a~~iTPVPGGVGp~T~amLl~N~v~a~ 368 (375)
++.. +. ...|-++++++++ ....+ . ...+--|-|-.|.-|+.-|+.++++.+
T Consensus 80 ~~~~-p~~~~a~~~~i~i~~~~el~~~~~~~~~~~~~~~IaITGTnGKTTTt~ll~~iL~~~ 140 (468)
T PRK04690 80 SPYR-PEALAAAARGTPFIGGTALWFAEHAARDGVVPGTVCVTGTKGKSTTTALLAHLLRAA 140 (468)
T ss_pred CCCC-HHHHHHHHcCCcEEEHHHHHHHHHhhccCCCCCEEEEeCCCCHHHHHHHHHHHHHhc
Confidence 6531 10 0123368888875 11111 0 011223568999999999999998764
No 319
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=94.11 E-value=0.11 Score=48.75 Aligned_cols=54 Identities=17% Similarity=0.197 Sum_probs=41.4
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCC---Ce-EEEEcCC----------------CCCHHhhccCCcEEEEccCC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQRED---AT-VSIVHSR----------------TKNPEEITRQADIIISAVGQ 295 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~g---At-Vtv~hs~----------------t~~L~~~l~~ADIVIsAvG~ 295 (375)
+.+++.|||.|.+ |.+++..|.+.+ .+ +++++++ +.+.++.++++|+||.+++.
T Consensus 3 ~~~kI~iIG~G~m-g~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiViiavp~ 76 (245)
T PRK07634 3 KKHRILFIGAGRM-AEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYNVSTTTDWKQHVTSVDTIVLAMPP 76 (245)
T ss_pred CCCeEEEECcCHH-HHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcCcEEeCChHHHHhcCCEEEEecCH
Confidence 4578999999986 999999988775 23 6666543 13456678899999999984
No 320
>PRK06841 short chain dehydrogenase; Provisional
Probab=94.10 E-value=0.081 Score=49.05 Aligned_cols=38 Identities=34% Similarity=0.522 Sum_probs=34.2
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.+++||+++|.|+++-+|..++..|+++|++|+++.|.
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~ 48 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS 48 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999998889999999999999999988764
No 321
>PRK07774 short chain dehydrogenase; Provisional
Probab=94.09 E-value=0.07 Score=49.23 Aligned_cols=37 Identities=30% Similarity=0.358 Sum_probs=33.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||+++|.|+++-+|+.++..|+++|++|++..|.
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~ 39 (250)
T PRK07774 3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADIN 39 (250)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999998888999999999999999998775
No 322
>PRK05854 short chain dehydrogenase; Provisional
Probab=94.07 E-value=0.048 Score=53.30 Aligned_cols=38 Identities=37% Similarity=0.400 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.+++||+++|.|++.-+|+.++..|+++|++|+++.|+
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~ 47 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRN 47 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 36789999999998889999999999999999988764
No 323
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=94.07 E-value=0.11 Score=54.85 Aligned_cols=53 Identities=23% Similarity=0.190 Sum_probs=44.1
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC----------------------------------CCHHhhccCCcE
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------------------------KNPEEITRQADI 288 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t----------------------------------~~L~~~l~~ADI 288 (375)
++|.|||.|.+ |.++|..|++.|..|++++++. .++.+.+++||+
T Consensus 5 ~kIavIG~G~M-G~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~ 83 (495)
T PRK07531 5 MKAACIGGGVI-GGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADW 83 (495)
T ss_pred CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCE
Confidence 57999999886 9999999999999999986541 245567899999
Q ss_pred EEEccCCC
Q 017184 289 IISAVGQP 296 (375)
Q Consensus 289 VIsAvG~p 296 (375)
||.++...
T Consensus 84 Vieavpe~ 91 (495)
T PRK07531 84 IQESVPER 91 (495)
T ss_pred EEEcCcCC
Confidence 99998754
No 324
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.06 E-value=0.11 Score=50.75 Aligned_cols=70 Identities=20% Similarity=0.286 Sum_probs=50.9
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------------------------------CCHHhhcc
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------------------KNPEEITR 284 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------------------------------~~L~~~l~ 284 (375)
++|.|||.|.+ |.++|..|+..|..|+++++.. .++ +.++
T Consensus 6 ~~V~ViGaG~m-G~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~-~~~~ 83 (286)
T PRK07819 6 QRVGVVGAGQM-GAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDL-GDFA 83 (286)
T ss_pred cEEEEEcccHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCH-HHhC
Confidence 48999999875 9999999999999999986541 233 4478
Q ss_pred CCcEEEEccCCCCcccC-------CCc-CCCcEEEEee
Q 017184 285 QADIIISAVGQPNMVRG-------SWI-KPGAVIIDVG 314 (375)
Q Consensus 285 ~ADIVIsAvG~p~~I~~-------~~v-k~gavVIDvg 314 (375)
+||+||-++..-.-++. .+. ++++++..--
T Consensus 84 ~~d~ViEav~E~~~~K~~l~~~l~~~~~~~~~il~snT 121 (286)
T PRK07819 84 DRQLVIEAVVEDEAVKTEIFAELDKVVTDPDAVLASNT 121 (286)
T ss_pred CCCEEEEecccCHHHHHHHHHHHHHhhCCCCcEEEECC
Confidence 99999999873221221 344 6787776643
No 325
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=94.06 E-value=0.21 Score=47.74 Aligned_cols=93 Identities=18% Similarity=0.190 Sum_probs=60.8
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-------------------CCH----
Q 017184 223 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNP---- 279 (375)
Q Consensus 223 PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-------------------~~L---- 279 (375)
++.+..++..++...+ -.|.+|+|.|.++.+|..+++++...|++|+++.+.. .++
T Consensus 122 ~~~~~ta~~~~~~~~~-~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 200 (324)
T cd08292 122 IAMPLSALMLLDFLGV-KPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKV 200 (324)
T ss_pred cccHHHHHHHHHhhCC-CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHH
Confidence 3334444444544333 3588999999988889999999999999877664321 112
Q ss_pred Hhhc--cCCcEEEEccCCCCcc-cCCCcCCCcEEEEeeec
Q 017184 280 EEIT--RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGIN 316 (375)
Q Consensus 280 ~~~l--~~ADIVIsAvG~p~~I-~~~~vk~gavVIDvgin 316 (375)
.+.+ +..|+|+.++|.+..- --+.++++..+|++|..
T Consensus 201 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (324)
T cd08292 201 REAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGSM 240 (324)
T ss_pred HHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEecC
Confidence 1222 2589999998875321 12456788888998853
No 326
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=94.05 E-value=0.11 Score=50.31 Aligned_cols=89 Identities=17% Similarity=-0.006 Sum_probs=57.9
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------------CCHHhhc---
Q 017184 227 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------KNPEEIT--- 283 (375)
Q Consensus 227 ~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------------~~L~~~l--- 283 (375)
...+..|.+..---.|.+|+|.|+++.||..+++++...|++|+.+.+.. .++.+.+
T Consensus 124 ~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~ 203 (325)
T TIGR02825 124 LTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKA 203 (325)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHh
Confidence 33334443333234689999999877789999999999999877654321 1222221
Q ss_pred --cCCcEEEEccCCCCcc-cCCCcCCCcEEEEeee
Q 017184 284 --RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGI 315 (375)
Q Consensus 284 --~~ADIVIsAvG~p~~I-~~~~vk~gavVIDvgi 315 (375)
+..|+|+.++|.+.+- --++++++..++.+|.
T Consensus 204 ~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~ 238 (325)
T TIGR02825 204 SPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGA 238 (325)
T ss_pred CCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecc
Confidence 2368999888865431 2246788888888885
No 327
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional
Probab=94.04 E-value=0.12 Score=54.11 Aligned_cols=53 Identities=30% Similarity=0.310 Sum_probs=44.9
Q ss_pred ccCCHHHHH----HHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEE-EEcCC
Q 017184 222 IPCTPKGCI----ELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVS-IVHSR 275 (375)
Q Consensus 222 ~PcT~~gvi----~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVt-v~hs~ 275 (375)
.+.|.+|++ ++|++.+.+++||+|+|=|.|+ ||..++..|.+.||+|+ +++++
T Consensus 213 ~eATG~Gv~~~~~~~l~~~~~~l~Gk~VaVqG~Gn-Vg~~aa~~L~e~GakVVavSD~~ 270 (454)
T PTZ00079 213 PEATGYGLVYFVLEVLKKLNDSLEGKTVVVSGSGN-VAQYAVEKLLQLGAKVLTMSDSD 270 (454)
T ss_pred CcccHHHHHHHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEEcCC
Confidence 467888865 5566678999999999999998 59999999999999877 77665
No 328
>PRK07035 short chain dehydrogenase; Provisional
Probab=94.04 E-value=0.052 Score=50.37 Aligned_cols=38 Identities=37% Similarity=0.524 Sum_probs=34.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.++++|+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~ 41 (252)
T PRK07035 4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRK 41 (252)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999999999999999999999999988765
No 329
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=94.03 E-value=0.28 Score=49.67 Aligned_cols=85 Identities=24% Similarity=0.329 Sum_probs=57.7
Q ss_pred ccCCHHHHHHHHHHhC------CCCCCCEEEEEcCCcccHHHHHHHHhhCC-CeEEEEcCC------------------C
Q 017184 222 IPCTPKGCIELLHRYG------FDIKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSR------------------T 276 (375)
Q Consensus 222 ~PcT~~gvi~lL~~~~------i~l~GK~vvVIGrs~~VGkpla~lL~~~g-AtVtv~hs~------------------t 276 (375)
+|+++.-.++.|-+.. -.-+|+.|+|+|+|+.||..+.+++...| +.|+.+.+. +
T Consensus 132 ~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~ 211 (347)
T KOG1198|consen 132 LPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKD 211 (347)
T ss_pred CchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCC
Confidence 4655555555555555 44579999999999999999999999999 565555433 2
Q ss_pred CCHHhhccC-----CcEEEEccCCCCc-ccCCCcCC
Q 017184 277 KNPEEITRQ-----ADIIISAVGQPNM-VRGSWIKP 306 (375)
Q Consensus 277 ~~L~~~l~~-----ADIVIsAvG~p~~-I~~~~vk~ 306 (375)
.|..+.+++ -|+|+-++|.+.+ .....+..
T Consensus 212 ~~~~e~~kk~~~~~~DvVlD~vg~~~~~~~~~~l~~ 247 (347)
T KOG1198|consen 212 ENVVELIKKYTGKGVDVVLDCVGGSTLTKSLSCLLK 247 (347)
T ss_pred HHHHHHHHhhcCCCccEEEECCCCCccccchhhhcc
Confidence 344455554 7999988887543 33334443
No 330
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=94.02 E-value=0.11 Score=52.24 Aligned_cols=71 Identities=27% Similarity=0.349 Sum_probs=55.1
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC----------------------------CCCHHhhccCCcEEEEccC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------------------TKNPEEITRQADIIISAVG 294 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~----------------------------t~~L~~~l~~ADIVIsAvG 294 (375)
++|.|||+|.- |.++|..|.++|..|++-.++ |.|+.+.++.||+||.+++
T Consensus 2 ~kI~ViGaGsw-GTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~avP 80 (329)
T COG0240 2 MKIAVIGAGSW-GTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAVP 80 (329)
T ss_pred ceEEEEcCChH-HHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEECC
Confidence 57999999886 999999999999888886432 4588899999999999999
Q ss_pred CCCc---cc--CCCcCCCcEEEEee
Q 017184 295 QPNM---VR--GSWIKPGAVIIDVG 314 (375)
Q Consensus 295 ~p~~---I~--~~~vk~gavVIDvg 314 (375)
.-.+ ++ +..+++++.++-+.
T Consensus 81 s~~~r~v~~~l~~~l~~~~~iv~~s 105 (329)
T COG0240 81 SQALREVLRQLKPLLLKDAIIVSAT 105 (329)
T ss_pred hHHHHHHHHHHhhhccCCCeEEEEe
Confidence 6432 21 14567777776653
No 331
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.02 E-value=0.26 Score=53.43 Aligned_cols=34 Identities=24% Similarity=0.446 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.||+|+|||+|-+ |...|..|.++|+.|+++.+.
T Consensus 309 ~~kkVaIIG~Gpa-Gl~aA~~L~~~G~~Vtv~e~~ 342 (639)
T PRK12809 309 RSEKVAVIGAGPA-GLGCADILARAGVQVDVFDRH 342 (639)
T ss_pred CCCEEEEECcCHH-HHHHHHHHHHcCCcEEEEeCC
Confidence 5999999999987 999999999999999998644
No 332
>PRK05225 ketol-acid reductoisomerase; Validated
Probab=94.01 E-value=0.055 Score=56.81 Aligned_cols=79 Identities=27% Similarity=0.372 Sum_probs=56.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC-------------------CCCHHhhccCCcEEEEccCCCC--
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------------TKNPEEITRQADIIISAVGQPN-- 297 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~-------------------t~~L~~~l~~ADIVIsAvG~p~-- 297 (375)
.|+||+|+|||.|.. |+.-|..|...|..|++.-|. ..++.+.+++||+|+..++-..
T Consensus 33 ~LkgKtIaIIGyGSq-G~AqAlNLrdSGvnVvvglr~~~id~~~~s~~kA~~dGF~v~~~~Ea~~~ADvVviLlPDt~q~ 111 (487)
T PRK05225 33 YLKGKKIVIVGCGAQ-GLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHS 111 (487)
T ss_pred HhCCCEEEEEccCHH-HHHHhCCCccccceeEEeccccccccccchHHHHHhcCCccCCHHHHHHhCCEEEEcCChHHHH
Confidence 368999999999986 998888888889988855433 1357788999999999998431
Q ss_pred cccC---CCcCCCc-EEEEeeecCC
Q 017184 298 MVRG---SWIKPGA-VIIDVGINPV 318 (375)
Q Consensus 298 ~I~~---~~vk~ga-vVIDvgin~~ 318 (375)
.+-. ..+|+|+ +.+-=|+|-.
T Consensus 112 ~v~~~i~p~LK~Ga~L~fsHGFni~ 136 (487)
T PRK05225 112 DVVRAVQPLMKQGAALGYSHGFNIV 136 (487)
T ss_pred HHHHHHHhhCCCCCEEEecCCceee
Confidence 2222 3567876 3444455543
No 333
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=94.01 E-value=0.12 Score=50.13 Aligned_cols=33 Identities=24% Similarity=0.175 Sum_probs=29.7
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEc
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVH 273 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~h 273 (375)
.||+++|.|+++.+|+.++..|+++|++|+++.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~ 36 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATV 36 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEE
Confidence 489999999998899999999999999987764
No 334
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=94.01 E-value=0.09 Score=53.00 Aligned_cols=63 Identities=14% Similarity=0.137 Sum_probs=46.8
Q ss_pred HHHHHHHHhhCCCeEEEEcCCC-------------------CCHHhhccCCcEEEEccCCCCcc----c--CCCcCCCcE
Q 017184 255 GMPAALLLQREDATVSIVHSRT-------------------KNPEEITRQADIIISAVGQPNMV----R--GSWIKPGAV 309 (375)
Q Consensus 255 Gkpla~lL~~~gAtVtv~hs~t-------------------~~L~~~l~~ADIVIsAvG~p~~I----~--~~~vk~gav 309 (375)
|.|+|..|++.|.+|++.+++. .+..+..+++|+||+.++.++-+ . .+.+++|++
T Consensus 32 GspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~AaS~aEAAa~ADVVIL~LPd~aaV~eVl~GLaa~L~~GaI 111 (341)
T TIGR01724 32 GSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKVVSDDKEAAKHGEIHVLFTPFGKGTFSIARTIIEHVPENAV 111 (341)
T ss_pred HHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCeecCCHHHHHhCCCEEEEecCCHHHHHHHHHHHHhcCCCCCE
Confidence 6777888877788888775431 24668899999999999976532 2 245788999
Q ss_pred EEEeeecC
Q 017184 310 IIDVGINP 317 (375)
Q Consensus 310 VIDvgin~ 317 (375)
|||.++..
T Consensus 112 VID~STIs 119 (341)
T TIGR01724 112 ICNTCTVS 119 (341)
T ss_pred EEECCCCC
Confidence 99998653
No 335
>PRK06196 oxidoreductase; Provisional
Probab=94.00 E-value=0.058 Score=52.47 Aligned_cols=39 Identities=31% Similarity=0.468 Sum_probs=35.4
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
..+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 21 ~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~ 59 (315)
T PRK06196 21 GHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARR 59 (315)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 567899999999998889999999999999999988765
No 336
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.00 E-value=0.075 Score=49.91 Aligned_cols=37 Identities=16% Similarity=0.312 Sum_probs=33.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 274 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs 274 (375)
.+++||+++|.|++.-+|+.++..|+++|++|+++.+
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~ 40 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYN 40 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 3578999999999998999999999999999988754
No 337
>PRK06180 short chain dehydrogenase; Provisional
Probab=94.00 E-value=0.1 Score=49.56 Aligned_cols=35 Identities=17% Similarity=-0.013 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.+|+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~ 37 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRS 37 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCC
Confidence 47899999999999999999999999999988764
No 338
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=93.99 E-value=0.2 Score=50.92 Aligned_cols=113 Identities=22% Similarity=0.282 Sum_probs=68.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhh-CCCe---EEEEcCCC----------C-------CHHhhccCCcEEEEccCCCC--
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQR-EDAT---VSIVHSRT----------K-------NPEEITRQADIIISAVGQPN-- 297 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~-~gAt---Vtv~hs~t----------~-------~L~~~l~~ADIVIsAvG~p~-- 297 (375)
.+.+|.|||+++.||+-+..+|.+ .+.. +..+.+.. + +. +..++.|+++.|+|.--
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~~l~v~~~~~-~~~~~~Divf~a~~~~~s~ 82 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGREIIIQEAKI-NSFEGVDIAFFSAGGEVSR 82 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCcceEEEeCCH-HHhcCCCEEEECCChHHHH
Confidence 456899999999999999999994 5555 54444331 1 22 23478999999997421
Q ss_pred cccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHH
Q 017184 298 MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLL 361 (375)
Q Consensus 298 ~I~~~~vk~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl 361 (375)
-+-+...+.|.+|||.+-.+.-++.-+ =.+-.|..+.+.+..+ +-..|| -.|++|++
T Consensus 83 ~~~~~~~~~G~~VID~Ss~fR~~~~vp---lvvPEvN~e~i~~~~~-iIanPn---C~tt~~~l 139 (347)
T PRK06728 83 QFVNQAVSSGAIVIDNTSEYRMAHDVP---LVVPEVNAHTLKEHKG-IIAVPN---CSALQMVT 139 (347)
T ss_pred HHHHHHHHCCCEEEECchhhcCCCCCC---eEeCCcCHHHHhccCC-EEECCC---CHHHHHHH
Confidence 122233467999999986654332111 2344555455444224 334665 55666663
No 339
>PRK07478 short chain dehydrogenase; Provisional
Probab=93.96 E-value=0.058 Score=50.20 Aligned_cols=37 Identities=38% Similarity=0.517 Sum_probs=33.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||+++|.|+++-+|+.++..|+++|++|++..++
T Consensus 3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~ 39 (254)
T PRK07478 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARR 39 (254)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999889999999999999999888764
No 340
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=93.96 E-value=0.053 Score=51.27 Aligned_cols=38 Identities=37% Similarity=0.553 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.+++||.++|.|+++-+|+.++..|+++|++|++..++
T Consensus 6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~ 43 (278)
T PRK08277 6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRN 43 (278)
T ss_pred eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999998888999999999999999988765
No 341
>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.95 E-value=0.12 Score=53.33 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=32.6
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
++||+|.|+|-|+. |+++|.+|.++|++|++++..
T Consensus 7 ~~~~~i~viG~G~~-G~~~a~~l~~~G~~v~~~D~~ 41 (460)
T PRK01390 7 FAGKTVAVFGLGGS-GLATARALVAGGAEVIAWDDN 41 (460)
T ss_pred cCCCEEEEEeecHh-HHHHHHHHHHCCCEEEEECCC
Confidence 67999999999998 999999999999999999865
No 342
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=93.95 E-value=0.13 Score=50.95 Aligned_cols=52 Identities=17% Similarity=0.302 Sum_probs=41.2
Q ss_pred EEEEEcCCcccHHHHHHHHhhCC--CeEEEEcCCCC-------CH----------------HhhccCCcEEEEccCCC
Q 017184 244 RAVVIGRSNIVGMPAALLLQRED--ATVSIVHSRTK-------NP----------------EEITRQADIIISAVGQP 296 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~g--AtVtv~hs~t~-------~L----------------~~~l~~ADIVIsAvG~p 296 (375)
+|.|||.|. ||.+++..|+.+| .+|.+++++.. ++ .+.+++||+||.++|.|
T Consensus 2 kI~IIGaG~-VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~~~l~~aDiViita~~~ 78 (308)
T cd05292 2 KVAIVGAGF-VGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYADCKGADVVVITAGAN 78 (308)
T ss_pred EEEEECCCH-HHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCHHHhCCCCEEEEccCCC
Confidence 699999976 6999999999998 47888876421 11 24578999999999975
No 343
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=93.94 E-value=0.15 Score=50.50 Aligned_cols=39 Identities=18% Similarity=0.108 Sum_probs=34.1
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcC
Q 017184 236 YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 274 (375)
Q Consensus 236 ~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs 274 (375)
...-+++|+|+|.|++|.+|..++..|+++|.+|+.+.+
T Consensus 9 ~~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~ 47 (348)
T PRK15181 9 TKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDN 47 (348)
T ss_pred hcccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 345678999999999999999999999999999987754
No 344
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=93.94 E-value=0.15 Score=50.68 Aligned_cols=52 Identities=21% Similarity=0.413 Sum_probs=40.2
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCC--eEEEEcCC-------------------------CCCHHhhccCCcEEEEccCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSR-------------------------TKNPEEITRQADIIISAVGQ 295 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gA--tVtv~hs~-------------------------t~~L~~~l~~ADIVIsAvG~ 295 (375)
.||.|||+|. ||..++..|+..|. ++.+++.+ +.+. +.+++|||||.++|.
T Consensus 4 ~Ki~IiGaG~-VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy-~~~~~adivvitaG~ 81 (312)
T cd05293 4 NKVTVVGVGQ-VGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDY-SVTANSKVVIVTAGA 81 (312)
T ss_pred CEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCH-HHhCCCCEEEECCCC
Confidence 4899999977 59999999988873 57777543 1233 458999999999996
Q ss_pred C
Q 017184 296 P 296 (375)
Q Consensus 296 p 296 (375)
|
T Consensus 82 ~ 82 (312)
T cd05293 82 R 82 (312)
T ss_pred C
Confidence 4
No 345
>PRK07024 short chain dehydrogenase; Provisional
Probab=93.93 E-value=0.083 Score=49.43 Aligned_cols=34 Identities=26% Similarity=0.343 Sum_probs=31.0
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~ 35 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARR 35 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999989999999999999999998765
No 346
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=93.92 E-value=0.058 Score=50.56 Aligned_cols=36 Identities=19% Similarity=0.334 Sum_probs=33.0
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERS 39 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 689999999998888999999999999999988765
No 347
>PRK08223 hypothetical protein; Validated
Probab=93.91 E-value=0.11 Score=51.39 Aligned_cols=35 Identities=20% Similarity=0.297 Sum_probs=30.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEc
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVH 273 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~h 273 (375)
-.|+.++|+|||.|+. |-+++..|+..|. ++++++
T Consensus 23 ~kL~~s~VlIvG~GGL-Gs~va~~LA~aGVG~i~lvD 58 (287)
T PRK08223 23 QRLRNSRVAIAGLGGV-GGIHLLTLARLGIGKFTIAD 58 (287)
T ss_pred HHHhcCCEEEECCCHH-HHHHHHHHHHhCCCeEEEEe
Confidence 3468899999999996 9999999999996 788874
No 348
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=93.89 E-value=0.083 Score=48.77 Aligned_cols=36 Identities=39% Similarity=0.542 Sum_probs=32.9
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
++||+++|.|.++-+|+.++..|+++|++|.++.|+
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~ 37 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLN 37 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 578999999999999999999999999999888765
No 349
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=93.89 E-value=0.067 Score=49.63 Aligned_cols=37 Identities=38% Similarity=0.513 Sum_probs=33.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~ 40 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLN 40 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence 4679999999999999999999999999999887654
No 350
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=93.89 E-value=0.11 Score=50.56 Aligned_cols=52 Identities=19% Similarity=0.188 Sum_probs=40.3
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCC----CeEEEEcCCC-----------------CCHHhhccCCcEEEEccCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQRED----ATVSIVHSRT-----------------KNPEEITRQADIIISAVGQ 295 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~g----AtVtv~hs~t-----------------~~L~~~l~~ADIVIsAvG~ 295 (375)
.++.|||.|.+ |.+++..|.+.| .+|++++++. .+..+.++++|+||.+++.
T Consensus 2 ~~I~iIG~G~m-G~ala~~L~~~g~~~~~~V~~~~r~~~~~~~~l~~~~~~~~~~~~~~e~~~~aDvVilavpp 74 (277)
T PRK06928 2 EKIGFIGYGSM-ADMIATKLLETEVATPEEIILYSSSKNEHFNQLYDKYPTVELADNEAEIFTKCDHSFICVPP 74 (277)
T ss_pred CEEEEECccHH-HHHHHHHHHHCCCCCcccEEEEeCCcHHHHHHHHHHcCCeEEeCCHHHHHhhCCEEEEecCH
Confidence 36899999885 999999999887 5788776532 2344567889999999884
No 351
>PLN02427 UDP-apiose/xylose synthase
Probab=93.88 E-value=0.12 Score=51.65 Aligned_cols=60 Identities=22% Similarity=0.222 Sum_probs=45.9
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHHhhC-CCeEEEEcCCCC----------------------------CHHhhccCC
Q 017184 236 YGFDIKGKRAVVIGRSNIVGMPAALLLQRE-DATVSIVHSRTK----------------------------NPEEITRQA 286 (375)
Q Consensus 236 ~~i~l~GK~vvVIGrs~~VGkpla~lL~~~-gAtVtv~hs~t~----------------------------~L~~~l~~A 286 (375)
.|-.++.++|+|.|++|.+|+.++..|+++ |.+|+.+.+... .+.+.++.+
T Consensus 8 ~~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~ 87 (386)
T PLN02427 8 DGKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMA 87 (386)
T ss_pred CCCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcC
Confidence 355677789999999999999999999998 588887764321 134566789
Q ss_pred cEEEEccCC
Q 017184 287 DIIISAVGQ 295 (375)
Q Consensus 287 DIVIsAvG~ 295 (375)
|+||..++.
T Consensus 88 d~ViHlAa~ 96 (386)
T PLN02427 88 DLTINLAAI 96 (386)
T ss_pred CEEEEcccc
Confidence 999977763
No 352
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=93.88 E-value=0.069 Score=49.00 Aligned_cols=36 Identities=28% Similarity=0.404 Sum_probs=32.9
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+.+|+++|.|+++-+|+.++..|+++|++|++..|+
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~ 39 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDIC 39 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999999999999999999999999999888765
No 353
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=93.87 E-value=0.14 Score=49.18 Aligned_cols=34 Identities=26% Similarity=0.227 Sum_probs=30.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 274 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs 274 (375)
+||+++|.|+++.+|+.++..|+++|.+|+++.+
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r 36 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVR 36 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4799999999888999999999999999887654
No 354
>PRK07825 short chain dehydrogenase; Provisional
Probab=93.87 E-value=0.073 Score=50.17 Aligned_cols=37 Identities=27% Similarity=0.375 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||+++|.|+++-+|+.++..|+++|+.|.++.++
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~ 38 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLD 38 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 5789999999999999999999999999999888664
No 355
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=93.87 E-value=0.12 Score=51.09 Aligned_cols=77 Identities=29% Similarity=0.450 Sum_probs=55.1
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC---C------------------CCHH--hhccCCcEEEEccCCC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR---T------------------KNPE--EITRQADIIISAVGQP 296 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~---t------------------~~L~--~~l~~ADIVIsAvG~p 296 (375)
..|++|+|+|.|. +|..+++++...|+.|+++.++ . .++. .....+|+||.++|.+
T Consensus 171 ~~g~~vlI~G~G~-vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 249 (355)
T cd08230 171 WNPRRALVLGAGP-IGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGVP 249 (355)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEecCCccchhhhhhcCCCCEEEECcCCH
Confidence 4799999999865 6999999999999998887652 1 1111 1123579999999987
Q ss_pred Cccc--CCCcCCCcEEEEeeecC
Q 017184 297 NMVR--GSWIKPGAVIIDVGINP 317 (375)
Q Consensus 297 ~~I~--~~~vk~gavVIDvgin~ 317 (375)
..+. -+.++++..++-+|...
T Consensus 250 ~~~~~~~~~l~~~G~~v~~G~~~ 272 (355)
T cd08230 250 PLAFEALPALAPNGVVILFGVPG 272 (355)
T ss_pred HHHHHHHHHccCCcEEEEEecCC
Confidence 5432 24678888888888643
No 356
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=93.87 E-value=0.094 Score=52.82 Aligned_cols=76 Identities=24% Similarity=0.375 Sum_probs=52.6
Q ss_pred CEEEEEcCCcccHHHHHHHHhhC-CCeEE-EEcCCC---C--------------------CHHhhccCCcEEEEccCCCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQRE-DATVS-IVHSRT---K--------------------NPEEITRQADIIISAVGQPN 297 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~-gAtVt-v~hs~t---~--------------------~L~~~l~~ADIVIsAvG~p~ 297 (375)
.+|.|+|++|.+|+-+..+|.++ +.++. ++.++. + +.++...++|+||.|++...
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~~~~~~~~~~DvVf~alP~~~ 80 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPIDEEEIAEDADVVFLALPHGV 80 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecCCHHHhhcCCCEEEECCCchH
Confidence 37999999888999999999877 56766 544331 1 12233457999999998532
Q ss_pred c--ccCCCcCCCcEEEEeeecCC
Q 017184 298 M--VRGSWIKPGAVIIDVGINPV 318 (375)
Q Consensus 298 ~--I~~~~vk~gavVIDvgin~~ 318 (375)
. +-+...+.|..|||.+-...
T Consensus 81 s~~~~~~~~~~G~~VIDlS~~fR 103 (346)
T TIGR01850 81 SAELAPELLAAGVKVIDLSADFR 103 (346)
T ss_pred HHHHHHHHHhCCCEEEeCChhhh
Confidence 1 22234567899999986643
No 357
>PRK08589 short chain dehydrogenase; Validated
Probab=93.86 E-value=0.066 Score=50.82 Aligned_cols=37 Identities=32% Similarity=0.391 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~ 39 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA 39 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 3689999999998888999999999999999988765
No 358
>PRK06500 short chain dehydrogenase; Provisional
Probab=93.85 E-value=0.065 Score=49.29 Aligned_cols=36 Identities=28% Similarity=0.442 Sum_probs=32.6
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
++||+++|.|+++-+|+.++..|+++|++|++..++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~ 39 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRD 39 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCC
Confidence 679999999999999999999999999999887654
No 359
>PRK06194 hypothetical protein; Provisional
Probab=93.85 E-value=0.067 Score=50.72 Aligned_cols=37 Identities=22% Similarity=0.285 Sum_probs=33.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~ 39 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQ 39 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3678999999998888999999999999999988764
No 360
>PRK05876 short chain dehydrogenase; Provisional
Probab=93.84 E-value=0.058 Score=51.64 Aligned_cols=37 Identities=22% Similarity=0.364 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||.++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~ 39 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVD 39 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3789999999999989999999999999999988754
No 361
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=93.81 E-value=0.19 Score=46.62 Aligned_cols=35 Identities=20% Similarity=0.350 Sum_probs=30.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 274 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs 274 (375)
.++.++|+|+|.|+ +|-.++..|...|. ++++++.
T Consensus 18 ~L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~ 53 (197)
T cd01492 18 RLRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDD 53 (197)
T ss_pred HHHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEEC
Confidence 46789999999999 59999999999996 7988853
No 362
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=93.81 E-value=0.17 Score=48.53 Aligned_cols=93 Identities=17% Similarity=0.020 Sum_probs=60.0
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC-------------------CCCHHhhc
Q 017184 223 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------------TKNPEEIT 283 (375)
Q Consensus 223 PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~-------------------t~~L~~~l 283 (375)
|+.....+..|.+...--.|.+|+|.|+++.||..+..++...|++|+.+.+. ..++.+.+
T Consensus 125 ~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v 204 (329)
T cd08294 125 GMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEAL 204 (329)
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHH
Confidence 44444455555443333468999999987778999999999999987765432 12222221
Q ss_pred -----cCCcEEEEccCCCCcc-cCCCcCCCcEEEEeee
Q 017184 284 -----RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGI 315 (375)
Q Consensus 284 -----~~ADIVIsAvG~p~~I-~~~~vk~gavVIDvgi 315 (375)
+..|+|+.++|.+.+- --+.++++..++.+|.
T Consensus 205 ~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~ 242 (329)
T cd08294 205 KEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGS 242 (329)
T ss_pred HHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcc
Confidence 2368888888863321 2245677777888874
No 363
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=93.79 E-value=0.14 Score=51.26 Aligned_cols=52 Identities=29% Similarity=0.454 Sum_probs=40.6
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCC-C-eEEEEcCCC--------------------------CCHHhhccCCcEEEEccC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQRED-A-TVSIVHSRT--------------------------KNPEEITRQADIIISAVG 294 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~g-A-tVtv~hs~t--------------------------~~L~~~l~~ADIVIsAvG 294 (375)
+||+|||+|+ ||.+++++|..++ + ++.+.+... .+ .+.++.|||||-++|
T Consensus 1 ~KVaviGaG~-VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~-y~~~~~aDiVvitAG 78 (313)
T COG0039 1 MKVAVIGAGN-VGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGD-YEDLKGADIVVITAG 78 (313)
T ss_pred CeEEEECCCh-HHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCC-hhhhcCCCEEEEeCC
Confidence 5799999977 5999999998877 4 677775431 12 577999999998888
Q ss_pred CC
Q 017184 295 QP 296 (375)
Q Consensus 295 ~p 296 (375)
.|
T Consensus 79 ~p 80 (313)
T COG0039 79 VP 80 (313)
T ss_pred CC
Confidence 55
No 364
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=93.79 E-value=0.31 Score=44.67 Aligned_cols=94 Identities=30% Similarity=0.418 Sum_probs=63.7
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-------------------CCHHhh-
Q 017184 223 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEEI- 282 (375)
Q Consensus 223 PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-------------------~~L~~~- 282 (375)
|+....++..++....-..|++++|.|.+. +|..++.++...|++|+.+.+.. .+..+.
T Consensus 116 ~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 194 (271)
T cd05188 116 PEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEEL 194 (271)
T ss_pred cCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHH
Confidence 444444555555555445799999999999 89999999999999988775531 111111
Q ss_pred ----ccCCcEEEEccCCCCcc--cCCCcCCCcEEEEeeecC
Q 017184 283 ----TRQADIIISAVGQPNMV--RGSWIKPGAVIIDVGINP 317 (375)
Q Consensus 283 ----l~~ADIVIsAvG~p~~I--~~~~vk~gavVIDvgin~ 317 (375)
-+..|++|.++|.+..+ -.+.++++..++++|...
T Consensus 195 ~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 235 (271)
T cd05188 195 RLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTS 235 (271)
T ss_pred HHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCC
Confidence 24589999888873332 224667788888888543
No 365
>PRK07576 short chain dehydrogenase; Provisional
Probab=93.76 E-value=0.08 Score=50.00 Aligned_cols=37 Identities=27% Similarity=0.443 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~ 42 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRS 42 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999889999999999999999998765
No 366
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=93.76 E-value=0.1 Score=48.90 Aligned_cols=37 Identities=32% Similarity=0.420 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||+++|+|+++-+|+.++..|.++|+.|.++.++
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~ 40 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRS 40 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999999999999999999998887663
No 367
>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.74 E-value=0.16 Score=53.12 Aligned_cols=124 Identities=20% Similarity=0.283 Sum_probs=69.5
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC-CHHhhccCC--cEEEEccCCCCcccCCCc-CCCcEEEEeee
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-NPEEITRQA--DIIISAVGQPNMVRGSWI-KPGAVIIDVGI 315 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~-~L~~~l~~A--DIVIsAvG~p~~I~~~~v-k~gavVIDvgi 315 (375)
+.+|+|.|+|-|+. |+++|.+|.++|+.|++.+.+.. ...+.++.. .+-+. .|. ..++.+ ....+|+.-|+
T Consensus 5 ~~~~~i~v~G~G~s-G~s~a~~L~~~G~~v~~~D~~~~~~~~~~L~~~~~~~~~~-~g~---~~~~~~~~~d~vv~sp~I 79 (498)
T PRK02006 5 LQGPMVLVLGLGES-GLAMARWCARHGARLRVADTREAPPNLAALRAELPDAEFV-GGP---FDPALLDGVDLVALSPGL 79 (498)
T ss_pred cCCCEEEEEeecHh-HHHHHHHHHHCCCEEEEEcCCCCchhHHHHHhhcCCcEEE-eCC---CchhHhcCCCEEEECCCC
Confidence 57899999999997 99999999999999999986532 111223222 11111 110 001112 12456666666
Q ss_pred cCCC-C--CC----CCCCceeecccchh-hhhhh------cceeccCCCCccHHHHHHHHHHHHHHH
Q 017184 316 NPVE-D--AK----SPRGYRLVGDVCYE-EACEV------ASAITPVPGGVGPMTIAMLLSNTLTSA 368 (375)
Q Consensus 316 n~~~-~--~~----~~~g~kl~GDVd~~-~v~~~------a~~iTPVPGGVGp~T~amLl~N~v~a~ 368 (375)
++.. + +. ...|-++++++++- .+.+. ...+--|-|=-|.-|+..|+.++++.+
T Consensus 80 ~~~~~~~~~~~~~a~~~~i~v~~~~e~~~~~~~~l~~~~~~~~~I~VTGTnGKTTTt~ml~~iL~~~ 146 (498)
T PRK02006 80 SPLEAALAPLVAAARERGIPVWGEIELFAQALAALGASGYAPKVLAITGTNGKTTTTALTGLLCERA 146 (498)
T ss_pred CCcccccCHHHHHHHHCCCcEEEHHHHHHHHHhhhccccCCCCEEEEECCCcHHHHHHHHHHHHHHc
Confidence 5431 0 00 01133566666541 11110 001112557788999999999998764
No 368
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=93.71 E-value=0.18 Score=50.76 Aligned_cols=93 Identities=20% Similarity=0.286 Sum_probs=61.8
Q ss_pred cCCHHHHHHHHHHhCCC-CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCC---------------------HH
Q 017184 223 PCTPKGCIELLHRYGFD-IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------------PE 280 (375)
Q Consensus 223 PcT~~gvi~lL~~~~i~-l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~---------------------L~ 280 (375)
+|....++..+...+.. -.|++|+|.|.|. +|..+++++...|++|+++.+.... +.
T Consensus 159 ~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~-vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~ 237 (375)
T PLN02178 159 LCAGITVYSPMKYYGMTKESGKRLGVNGLGG-LGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMK 237 (375)
T ss_pred hccchHHHHHHHHhCCCCCCCCEEEEEcccH-HHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHH
Confidence 44444445555555443 3699999999865 6999999999999987776432111 11
Q ss_pred hhccCCcEEEEccCCCCccc--CCCcCCCcEEEEeeec
Q 017184 281 EITRQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 316 (375)
Q Consensus 281 ~~l~~ADIVIsAvG~p~~I~--~~~vk~gavVIDvgin 316 (375)
+.+..+|+||.++|.+..+. -+.++++..++.+|..
T Consensus 238 ~~~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~ 275 (375)
T PLN02178 238 EAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLP 275 (375)
T ss_pred HhhCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccC
Confidence 22234799999998764322 2467888888889864
No 369
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.70 E-value=0.11 Score=47.35 Aligned_cols=38 Identities=37% Similarity=0.472 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
++.+|+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~ 39 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNE 39 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 35689999999999999999999999999999887763
No 370
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=93.69 E-value=0.073 Score=49.64 Aligned_cols=36 Identities=28% Similarity=0.353 Sum_probs=32.9
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+.+|+++|.|.++-+|+.++..|+++|++|+++.++
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~ 39 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIK 39 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCC
Confidence 678999999998889999999999999999988765
No 371
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.67 E-value=0.087 Score=48.20 Aligned_cols=38 Identities=37% Similarity=0.450 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEE-cCCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV-HSRT 276 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~-hs~t 276 (375)
++.+|+++|+|+++-+|+.++..|+++|++|++. .++.
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~ 40 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINE 40 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 4789999999998889999999999999999888 6653
No 372
>PRK12743 oxidoreductase; Provisional
Probab=93.66 E-value=0.16 Score=47.42 Aligned_cols=34 Identities=24% Similarity=0.344 Sum_probs=30.7
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 274 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs 274 (375)
.+|+++|.|+++-+|+.++..|+++|++|.++.+
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~ 34 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWH 34 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 3689999999999999999999999999988754
No 373
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.64 E-value=0.089 Score=48.16 Aligned_cols=38 Identities=32% Similarity=0.464 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
+++||+++|.|.++-+|..++..|.++|++|++..|+.
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~ 39 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNE 39 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46899999999999999999999999999999887653
No 374
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=93.64 E-value=0.11 Score=49.88 Aligned_cols=34 Identities=26% Similarity=0.505 Sum_probs=29.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEc
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVH 273 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~h 273 (375)
.|+.++|+|||.|++ |.+++..|...|. ++++++
T Consensus 29 ~L~~~~VliiG~Ggl-Gs~va~~La~~Gvg~i~lvD 63 (245)
T PRK05690 29 KLKAARVLVVGLGGL-GCAASQYLAAAGVGTLTLVD 63 (245)
T ss_pred HhcCCeEEEECCCHH-HHHHHHHHHHcCCCEEEEEc
Confidence 568899999999985 9999999999995 788874
No 375
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.63 E-value=0.15 Score=46.92 Aligned_cols=36 Identities=28% Similarity=0.361 Sum_probs=31.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 274 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs 274 (375)
++++|+++|.|+++-+|+.++..|+++|++|++..+
T Consensus 3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~ 38 (252)
T PRK06077 3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAK 38 (252)
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 357899999999999999999999999999876543
No 376
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A ....
Probab=93.62 E-value=0.098 Score=46.88 Aligned_cols=37 Identities=35% Similarity=0.554 Sum_probs=31.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
+++||+|+|||.|.. +--++..|++.|.+|++++|+.
T Consensus 164 ~~~~k~V~VVG~G~S-A~d~a~~l~~~g~~V~~~~R~~ 200 (203)
T PF13738_consen 164 DFKGKRVVVVGGGNS-AVDIAYALAKAGKSVTLVTRSP 200 (203)
T ss_dssp GCTTSEEEEE--SHH-HHHHHHHHTTTCSEEEEEESS-
T ss_pred hcCCCcEEEEcChHH-HHHHHHHHHhhCCEEEEEecCC
Confidence 678999999999998 9899999999999999998864
No 377
>CHL00194 ycf39 Ycf39; Provisional
Probab=93.59 E-value=0.13 Score=50.21 Aligned_cols=51 Identities=18% Similarity=0.145 Sum_probs=41.1
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC---------------------CHHhhccCCcEEEEccC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------------NPEEITRQADIIISAVG 294 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~---------------------~L~~~l~~ADIVIsAvG 294 (375)
+|+|+|++|.+|+.++..|+++|.+|+...|+.. ++.+.++.+|+||.+++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCC
Confidence 7999999999999999999999999998866421 23456777888887765
No 378
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=93.57 E-value=0.088 Score=51.26 Aligned_cols=39 Identities=36% Similarity=0.409 Sum_probs=35.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
..+.||.++|-|++.-+|+++|.+|++.||+|+++.|+.
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~ 42 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSE 42 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 468999999999998899999999999999999998864
No 379
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.57 E-value=0.096 Score=48.18 Aligned_cols=38 Identities=24% Similarity=0.476 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
++++|+++|.|+++-+|+.++..|+++|++|++++|+.
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~ 41 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTE 41 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35789999999999999999999999999999988763
No 380
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=93.55 E-value=0.15 Score=48.16 Aligned_cols=53 Identities=19% Similarity=0.282 Sum_probs=42.7
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCC------HHhhccCC--cEEEEccCCC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN------PEEITRQA--DIIISAVGQP 296 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~------L~~~l~~A--DIVIsAvG~p 296 (375)
+++|+|+++.+|+.++..|+++|.+|+++.|...| +.+.++.. |+||..+|..
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~~d~~~~~~~~~~~~~~~~d~vi~~a~~~ 61 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQLDLTDPEALERLLRAIRPDAVVNTAAYT 61 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcccCCCCHHHHHHHHHhCCCCEEEECCccc
Confidence 48999998889999999999999999998876433 44556655 9999888753
No 381
>PLN02602 lactate dehydrogenase
Probab=93.55 E-value=0.19 Score=50.92 Aligned_cols=52 Identities=25% Similarity=0.423 Sum_probs=40.5
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCC--eEEEEcCCC-------------------------CCHHhhccCCcEEEEccCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT-------------------------KNPEEITRQADIIISAVGQ 295 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gA--tVtv~hs~t-------------------------~~L~~~l~~ADIVIsAvG~ 295 (375)
+||+|||+|. ||..+|..|+.++. ++.+++... .+ .+.+++|||||.++|.
T Consensus 38 ~KI~IIGaG~-VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~d-y~~~~daDiVVitAG~ 115 (350)
T PLN02602 38 TKVSVVGVGN-VGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTD-YAVTAGSDLCIVTAGA 115 (350)
T ss_pred CEEEEECCCH-HHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCC-HHHhCCCCEEEECCCC
Confidence 6999999977 59999999988873 577775431 12 2458999999999997
Q ss_pred C
Q 017184 296 P 296 (375)
Q Consensus 296 p 296 (375)
|
T Consensus 116 ~ 116 (350)
T PLN02602 116 R 116 (350)
T ss_pred C
Confidence 5
No 382
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=93.54 E-value=0.2 Score=48.96 Aligned_cols=93 Identities=15% Similarity=0.035 Sum_probs=59.8
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC---------------------CCHHh
Q 017184 223 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------------KNPEE 281 (375)
Q Consensus 223 PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t---------------------~~L~~ 281 (375)
+|.....+..|.+..---.|.+|+|.|+++.||..+++++...|++|+.+.+.. .++.+
T Consensus 133 ~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~ 212 (338)
T cd08295 133 GMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDA 212 (338)
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHH
Confidence 444445555565443334699999999977789999999999999877654321 12222
Q ss_pred hc-----cCCcEEEEccCCCCcc-cCCCcCCCcEEEEeee
Q 017184 282 IT-----RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGI 315 (375)
Q Consensus 282 ~l-----~~ADIVIsAvG~p~~I-~~~~vk~gavVIDvgi 315 (375)
.+ +..|+|+.++|...+- .-++++++..++.+|.
T Consensus 213 ~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~ 252 (338)
T cd08295 213 ALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGM 252 (338)
T ss_pred HHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEecc
Confidence 11 2468888888753221 2246777777888874
No 383
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.54 E-value=0.1 Score=49.09 Aligned_cols=37 Identities=24% Similarity=0.320 Sum_probs=31.7
Q ss_pred CCCCCEEEEEcCC--cccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRS--NIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs--~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.++||.++|.|++ .-+|+.++..|+++|++|+++.|+
T Consensus 4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~ 42 (252)
T PRK06079 4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN 42 (252)
T ss_pred ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc
Confidence 3789999999997 335999999999999999988654
No 384
>PRK07814 short chain dehydrogenase; Provisional
Probab=93.53 E-value=0.1 Score=49.14 Aligned_cols=37 Identities=27% Similarity=0.314 Sum_probs=33.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||+++|.|.++-+|+.++..|+.+|++|.++.|+
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~ 43 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAART 43 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999989999999999999999888765
No 385
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.52 E-value=0.089 Score=50.81 Aligned_cols=31 Identities=23% Similarity=0.245 Sum_probs=27.9
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHS 274 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs 274 (375)
++|.|||.|.+ |.+++..|++.|.+|++++.
T Consensus 4 ~kI~VIG~G~m-G~~ia~~la~~g~~V~~~d~ 34 (282)
T PRK05808 4 QKIGVIGAGTM-GNGIAQVCAVAGYDVVMVDI 34 (282)
T ss_pred cEEEEEccCHH-HHHHHHHHHHCCCceEEEeC
Confidence 57999999885 99999999999999999874
No 386
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=93.51 E-value=0.11 Score=52.02 Aligned_cols=74 Identities=16% Similarity=0.220 Sum_probs=52.5
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCC-CeEEEEcCCC----CCHHhhccCCcEEEEccCCC---CcccCCCcCCCcEEEEee
Q 017184 243 KRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRT----KNPEEITRQADIIISAVGQP---NMVRGSWIKPGAVIIDVG 314 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~g-AtVtv~hs~t----~~L~~~l~~ADIVIsAvG~p---~~I~~~~vk~gavVIDvg 314 (375)
-+|.|+|++|.+|.-+..+|.++. .++.-..++. .+.++...++|++|.|++.- .++ +...+.|..|||.+
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~~~~~~~~~~~~~~D~vFlalp~~~s~~~~-~~~~~~g~~VIDlS 80 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRRKDAAERAKLLNAADVAILCLPDDAAREAV-SLVDNPNTCIIDAS 80 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccccCcCCHhHhhcCCCEEEECCCHHHHHHHH-HHHHhCCCEEEECC
Confidence 379999999999999999999875 4544443332 24456668899999999742 122 22335689999998
Q ss_pred ecC
Q 017184 315 INP 317 (375)
Q Consensus 315 in~ 317 (375)
-.+
T Consensus 81 adf 83 (310)
T TIGR01851 81 TAY 83 (310)
T ss_pred hHH
Confidence 654
No 387
>PLN00198 anthocyanidin reductase; Provisional
Probab=93.51 E-value=0.2 Score=49.03 Aligned_cols=36 Identities=22% Similarity=0.182 Sum_probs=31.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEc
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVH 273 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~h 273 (375)
.++++|+|+|.|+++-+|+.++..|+++|++|+++.
T Consensus 5 ~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~ 40 (338)
T PLN00198 5 TPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTV 40 (338)
T ss_pred cCCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEE
Confidence 356799999999999999999999999999987653
No 388
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=93.47 E-value=0.14 Score=50.60 Aligned_cols=60 Identities=17% Similarity=0.142 Sum_probs=45.8
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC--------------------------CHHhhccCCcEEE
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK--------------------------NPEEITRQADIII 290 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~--------------------------~L~~~l~~ADIVI 290 (375)
+-+-.+++|+|.|+++.+|+.++..|+++|++|+++.+... .+.+.++..|+||
T Consensus 5 ~~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (353)
T PLN02896 5 GRESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVF 84 (353)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEE
Confidence 34557899999999999999999999999999987654311 1234456789999
Q ss_pred EccCCC
Q 017184 291 SAVGQP 296 (375)
Q Consensus 291 sAvG~p 296 (375)
..++..
T Consensus 85 h~A~~~ 90 (353)
T PLN02896 85 HVAASM 90 (353)
T ss_pred ECCccc
Confidence 877753
No 389
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=93.45 E-value=0.18 Score=50.44 Aligned_cols=54 Identities=17% Similarity=0.356 Sum_probs=40.7
Q ss_pred EEEEEcCCcccHHHHHHHHhhCC-C------eEEEEcCCC--------------------------CCHHhhccCCcEEE
Q 017184 244 RAVVIGRSNIVGMPAALLLQRED-A------TVSIVHSRT--------------------------KNPEEITRQADIII 290 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~g-A------tVtv~hs~t--------------------------~~L~~~l~~ADIVI 290 (375)
+|+|+|+++.||..++..|...+ + ++.+.+.+. .+..+.+++|||||
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVV 81 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVAI 81 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCEEE
Confidence 79999996667999999998765 2 266654432 23457889999999
Q ss_pred EccCCCC
Q 017184 291 SAVGQPN 297 (375)
Q Consensus 291 sAvG~p~ 297 (375)
.++|.|.
T Consensus 82 itAG~~~ 88 (323)
T cd00704 82 LVGAFPR 88 (323)
T ss_pred EeCCCCC
Confidence 9999754
No 390
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=93.42 E-value=0.13 Score=51.94 Aligned_cols=69 Identities=22% Similarity=0.334 Sum_probs=52.2
Q ss_pred EEEEEcCCcccHHHHHHHHhhCC--------CeEEEEcC-----C----------------------------CCCHHhh
Q 017184 244 RAVVIGRSNIVGMPAALLLQRED--------ATVSIVHS-----R----------------------------TKNPEEI 282 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~g--------AtVtv~hs-----~----------------------------t~~L~~~ 282 (375)
+|+|||+|.- |.++|..|.++| .+|++..+ . +.|+++.
T Consensus 1 kI~VIGaG~w-GtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~at~dl~ea 79 (342)
T TIGR03376 1 RVAVVGSGNW-GTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAVPDLVEA 79 (342)
T ss_pred CEEEECcCHH-HHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEEECCHHHH
Confidence 5899999885 999999999888 78888754 1 2467888
Q ss_pred ccCCcEEEEccCCCCc---cc--CCCcCCCcEEEEe
Q 017184 283 TRQADIIISAVGQPNM---VR--GSWIKPGAVIIDV 313 (375)
Q Consensus 283 l~~ADIVIsAvG~p~~---I~--~~~vk~gavVIDv 313 (375)
+++||+||.+++.-.+ +. ..+++++..+|-+
T Consensus 80 l~~ADiIIlAVPs~~i~~vl~~l~~~l~~~~~iVs~ 115 (342)
T TIGR03376 80 AKGADILVFVIPHQFLEGICKQLKGHVKPNARAISC 115 (342)
T ss_pred HhcCCEEEEECChHHHHHHHHHHHhhcCCCCEEEEE
Confidence 9999999999985332 11 1356777777665
No 391
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=93.42 E-value=0.16 Score=52.56 Aligned_cols=74 Identities=19% Similarity=0.273 Sum_probs=54.2
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC-----------------------------CHHhhccCCcEEEEcc
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------------------------NPEEITRQADIIISAV 293 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~-----------------------------~L~~~l~~ADIVIsAv 293 (375)
.+|.|||-|. ||.|+|..|.. +.+|+.++++.. ...+.+++||++|.++
T Consensus 7 mkI~vIGlGy-vGlpmA~~la~-~~~V~g~D~~~~~ve~l~~G~~~~~e~~~~~l~~~g~l~~t~~~~~~~~advvii~V 84 (425)
T PRK15182 7 VKIAIIGLGY-VGLPLAVEFGK-SRQVVGFDVNKKRILELKNGVDVNLETTEEELREARYLKFTSEIEKIKECNFYIITV 84 (425)
T ss_pred CeEEEECcCc-chHHHHHHHhc-CCEEEEEeCCHHHHHHHHCcCCCCCCCCHHHHHhhCCeeEEeCHHHHcCCCEEEEEc
Confidence 6799999988 59999999776 689999875421 1123578999999999
Q ss_pred CCCC---------ccc------CCCcCCCcEEEEeeecCC
Q 017184 294 GQPN---------MVR------GSWIKPGAVIIDVGINPV 318 (375)
Q Consensus 294 G~p~---------~I~------~~~vk~gavVIDvgin~~ 318 (375)
|-|. .+- ...+++|.+|||-.+-+.
T Consensus 85 ptp~~~~~~~dl~~v~~a~~~i~~~l~~g~lVI~~STv~p 124 (425)
T PRK15182 85 PTPINTYKQPDLTPLIKASETVGTVLNRGDIVVYESTVYP 124 (425)
T ss_pred CCCCCCCCCcchHHHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 9772 121 134688999999776543
No 392
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=93.37 E-value=0.2 Score=42.15 Aligned_cols=74 Identities=23% Similarity=0.238 Sum_probs=46.9
Q ss_pred EEEEEcCCcccHHHHHHHHhhC-CCeEEEE-cCCC---CC---------------HH-hhc--cCCcEEEEccCCCCc--
Q 017184 244 RAVVIGRSNIVGMPAALLLQRE-DATVSIV-HSRT---KN---------------PE-EIT--RQADIIISAVGQPNM-- 298 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~-gAtVtv~-hs~t---~~---------------L~-~~l--~~ADIVIsAvG~p~~-- 298 (375)
++.|+|.++.+|+-++..|... +.+++.+ .+.. +. .. +.+ .++|+||.+++....
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~ 80 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFEELAVDIVFLALPHGVSKE 80 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccccCChhhcCCCEEEEcCCcHHHHH
Confidence 4778997777788888877774 6665555 2211 00 00 112 478999999985432
Q ss_pred -cc--CCCcCCCcEEEEeeecC
Q 017184 299 -VR--GSWIKPGAVIIDVGINP 317 (375)
Q Consensus 299 -I~--~~~vk~gavVIDvgin~ 317 (375)
+. ....++|.+|||++...
T Consensus 81 ~~~~~~~~~~~g~~viD~s~~~ 102 (122)
T smart00859 81 IAPLLPKAAEAGVKVIDLSSAF 102 (122)
T ss_pred HHHHHHhhhcCCCEEEECCccc
Confidence 11 22357899999999654
No 393
>PRK06139 short chain dehydrogenase; Provisional
Probab=93.36 E-value=0.067 Score=53.18 Aligned_cols=38 Identities=21% Similarity=0.326 Sum_probs=34.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
++++|+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~ 41 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDE 41 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 47899999999988889999999999999999987753
No 394
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.34 E-value=0.082 Score=48.54 Aligned_cols=37 Identities=24% Similarity=0.383 Sum_probs=32.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||+++|+|.++-+|..++..|.++|++|+++.+.
T Consensus 2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~ 38 (253)
T PRK08217 2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLN 38 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3689999999997778999999999999999888765
No 395
>PRK06114 short chain dehydrogenase; Provisional
Probab=93.33 E-value=0.13 Score=47.94 Aligned_cols=39 Identities=33% Similarity=0.494 Sum_probs=34.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
.+++||.++|.|.++-+|+.++..|+++|++|.++.++.
T Consensus 4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~ 42 (254)
T PRK06114 4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRT 42 (254)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCc
Confidence 357899999999998899999999999999999887653
No 396
>PRK12742 oxidoreductase; Provisional
Probab=93.32 E-value=0.13 Score=47.05 Aligned_cols=36 Identities=22% Similarity=0.356 Sum_probs=31.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 274 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs 274 (375)
.++||+++|.|+++-+|+.++..|+++|++|++..+
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~ 38 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYA 38 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecC
Confidence 368999999999888899999999999999877643
No 397
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=93.26 E-value=0.15 Score=51.33 Aligned_cols=55 Identities=13% Similarity=0.180 Sum_probs=43.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC---------------C------HHhhccCCcEEEEccCC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------N------PEEITRQADIIISAVGQ 295 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~---------------~------L~~~l~~ADIVIsAvG~ 295 (375)
++|+|+|.|+.|-||+.++..|.++|.+|+.+.+... | +.+.++++|+||..++.
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~ 95 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAAD 95 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEcccc
Confidence 6899999999999999999999999999988765310 1 22345678999977753
No 398
>PRK10727 DNA-binding transcriptional regulator GalR; Provisional
Probab=93.26 E-value=4.2 Score=39.54 Aligned_cols=88 Identities=11% Similarity=0.127 Sum_probs=54.2
Q ss_pred eeeecHH-HHHHHHHHHHHHHHHhHhccCCCc-------------eEEEEEeC-CCcchHHHHHHHHHHHHHcCCeEEEE
Q 017184 85 KVIDGKA-VAKQIRDEITGEVSRMKDAIGVVP-------------GLAVILVG-DRKDSATYVRNKKKACQSVGINSFEV 149 (375)
Q Consensus 85 ~ildGk~-la~~i~~~lk~~v~~l~~~~g~~P-------------~LaiI~vG-~d~aS~~Yv~~k~k~a~~~GI~~~~~ 149 (375)
++|+|+. |+++-|+.+.+.+++| |.+| .+++|.-. .++--....+...+.|++.|......
T Consensus 20 rvLn~~~~Vs~~tr~rV~~~a~el----gY~pn~~ar~l~~~~~~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~~~~~~ 95 (343)
T PRK10727 20 RVINNSPKASEASRLAVHSAMESL----SYHPNANARALAQQSTETVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIG 95 (343)
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHH----CCCCCHHHHhhhhCCCCeEEEEeCCCCcchHHHHHHHHHHHHHHcCCEEEEE
Confidence 5677764 6677777776666655 4433 44554422 23333344567788999999887654
Q ss_pred eCCCCCCHHHHHHHHHHhhcCCCccEEEEe
Q 017184 150 HLPEDTSEQEVLKHISVFNDDPSVHGILVQ 179 (375)
Q Consensus 150 ~l~~~vs~~el~~~I~~LN~D~~V~GIlVq 179 (375)
.... +.++..+.++.+.. .+++||++.
T Consensus 96 ~~~~--~~~~~~~~i~~l~~-~~vdgiIi~ 122 (343)
T PRK10727 96 NGYH--NEQKERQAIEQLIR-HRCAALVVH 122 (343)
T ss_pred eCCC--CHHHHHHHHHHHHh-cCCCEEEEe
Confidence 4332 33444566666654 479999996
No 399
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.22 E-value=0.15 Score=46.49 Aligned_cols=37 Identities=32% Similarity=0.353 Sum_probs=32.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
++++|+++|.|.++-+|+.++..|+++|++|++..++
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~ 38 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYAS 38 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5688999999999999999999999999999777554
No 400
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.21 E-value=0.22 Score=51.18 Aligned_cols=121 Identities=17% Similarity=0.272 Sum_probs=67.0
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCC-HHhhccC--CcEEEEccCCCCcccCCCc-CCCcEEEEeee
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN-PEEITRQ--ADIIISAVGQPNMVRGSWI-KPGAVIIDVGI 315 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~-L~~~l~~--ADIVIsAvG~p~~I~~~~v-k~gavVIDvgi 315 (375)
+.||+++|+|.|++ |+.++.+|.++|+.|++.+..... ..+.+++ .-+.+. .|. .+.+.+ ....+|+--|+
T Consensus 3 ~~~~~~~v~G~g~~-G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~-~g~---~~~~~~~~~d~vv~spgi 77 (445)
T PRK04308 3 FQNKKILVAGLGGT-GISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFY-TGR---LKDALDNGFDILALSPGI 77 (445)
T ss_pred CCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEE-eCC---CCHHHHhCCCEEEECCCC
Confidence 57999999999987 999999999999999998754321 1111211 011110 011 000011 22345555555
Q ss_pred cCCCCCC---CCCCceeecccchh-hhh----hhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017184 316 NPVEDAK---SPRGYRLVGDVCYE-EAC----EVASAITPVPGGVGPMTIAMLLSNTLTSA 368 (375)
Q Consensus 316 n~~~~~~---~~~g~kl~GDVd~~-~v~----~~a~~iTPVPGGVGp~T~amLl~N~v~a~ 368 (375)
++....- ...|-.+.++.++- ... ...-+ |-|=-|.-|+..|+.++++..
T Consensus 78 ~~~~p~~~~a~~~~i~v~~~~~~~~~~~~~~~~~~I~---ITGT~GKTTTt~li~~iL~~~ 135 (445)
T PRK04308 78 SERQPDIEAFKQNGGRVLGDIELLADIVNRRGDKVIA---ITGSNGKTTVTSLVGYLCIKC 135 (445)
T ss_pred CCCCHHHHHHHHcCCcEEEhHHHHHHhhhcCCCCEEE---EECCCcHHHHHHHHHHHHHHc
Confidence 4421000 01123566666642 111 12233 447788999999999988764
No 401
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=93.21 E-value=0.23 Score=48.35 Aligned_cols=76 Identities=17% Similarity=0.311 Sum_probs=53.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCe-EEEEcCCCCCHH-----------h-hccCCcEEEEccCCCCccc--CCCc
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSRTKNPE-----------E-ITRQADIIISAVGQPNMVR--GSWI 304 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAt-Vtv~hs~t~~L~-----------~-~l~~ADIVIsAvG~p~~I~--~~~v 304 (375)
..|++++|+|.|. ||..+++++...|++ |.++.++...++ + .-..+|+||-++|.+..+. -+.+
T Consensus 143 ~~~~~vlV~G~G~-vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~~~i~~~~~~~~g~Dvvid~~G~~~~~~~~~~~l 221 (308)
T TIGR01202 143 VKVLPDLIVGHGT-LGRLLARLTKAAGGSPPAVWETNPRRRDGATGYEVLDPEKDPRRDYRAIYDASGDPSLIDTLVRRL 221 (308)
T ss_pred cCCCcEEEECCCH-HHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhccccChhhccCCCCCEEEECCCCHHHHHHHHHhh
Confidence 3688999999876 599999888889997 444543321111 1 1135799999999876543 2678
Q ss_pred CCCcEEEEeeec
Q 017184 305 KPGAVIIDVGIN 316 (375)
Q Consensus 305 k~gavVIDvgin 316 (375)
+++..++-+|..
T Consensus 222 ~~~G~iv~~G~~ 233 (308)
T TIGR01202 222 AKGGEIVLAGFY 233 (308)
T ss_pred hcCcEEEEEeec
Confidence 888888888864
No 402
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=93.19 E-value=0.18 Score=49.65 Aligned_cols=51 Identities=25% Similarity=0.431 Sum_probs=40.6
Q ss_pred EEEEcCCcccHHHHHHHHhhCC--CeEEEEcCCC-------------------------CCHHhhccCCcEEEEccCCCC
Q 017184 245 AVVIGRSNIVGMPAALLLQRED--ATVSIVHSRT-------------------------KNPEEITRQADIIISAVGQPN 297 (375)
Q Consensus 245 vvVIGrs~~VGkpla~lL~~~g--AtVtv~hs~t-------------------------~~L~~~l~~ADIVIsAvG~p~ 297 (375)
+.|||+|. ||.+++..|+..| .++++++.+. .+ .+.+++|||||.++|.|.
T Consensus 1 i~iiGaG~-VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDiVIitag~p~ 78 (300)
T cd00300 1 ITIIGAGN-VGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD-YADAADADIVVITAGAPR 78 (300)
T ss_pred CEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCEEEEcCCCCC
Confidence 47999988 6999999999888 4788886431 12 467899999999999753
No 403
>PRK07326 short chain dehydrogenase; Provisional
Probab=93.16 E-value=0.095 Score=47.93 Aligned_cols=36 Identities=33% Similarity=0.412 Sum_probs=32.6
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+.|++++|+|+++-+|+.++..|+++|++|+++.|+
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~ 39 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARD 39 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCC
Confidence 568999999998889999999999999999998765
No 404
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=93.15 E-value=0.2 Score=47.09 Aligned_cols=54 Identities=20% Similarity=0.200 Sum_probs=44.0
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-------------C------CHHhhccCCcEEEEccCCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------K------NPEEITRQADIIISAVGQP 296 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-------------~------~L~~~l~~ADIVIsAvG~p 296 (375)
+|+.|||+++-+|+-++.-+.++|.+||-.-|+. + .+.+.+..-|+||+|.|.+
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~ 73 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAG 73 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccceeecccccChhhhHhhhcCCceEEEeccCC
Confidence 4799999999999999999999999999886652 1 1335677889999998854
No 405
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=93.14 E-value=0.17 Score=51.44 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=34.4
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+...+|++++|+|+++-+|+.++..|+++|.+|+.+.|.
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~ 93 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVARE 93 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEec
Confidence 456789999999999999999999999999999888664
No 406
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=93.13 E-value=0.23 Score=48.26 Aligned_cols=74 Identities=20% Similarity=0.127 Sum_probs=51.4
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcCCC--------------------CCHHhhc-----cCCcEEEEccCC
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT--------------------KNPEEIT-----RQADIIISAVGQ 295 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs~t--------------------~~L~~~l-----~~ADIVIsAvG~ 295 (375)
|.+|+|.|+++.||..+.+++...|+ .|+.+.++. .++.+.+ +..|+|+.++|.
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~ 234 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGG 234 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCc
Confidence 48999999977789999999999998 787764321 1222222 247899988886
Q ss_pred CCcc-cCCCcCCCcEEEEeee
Q 017184 296 PNMV-RGSWIKPGAVIIDVGI 315 (375)
Q Consensus 296 p~~I-~~~~vk~gavVIDvgi 315 (375)
+.+- .-+.++++..++++|.
T Consensus 235 ~~~~~~~~~l~~~G~iv~~G~ 255 (345)
T cd08293 235 EISDTVISQMNENSHIILCGQ 255 (345)
T ss_pred HHHHHHHHHhccCCEEEEEee
Confidence 5431 1245788888888884
No 407
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.12 E-value=0.15 Score=48.11 Aligned_cols=37 Identities=19% Similarity=0.345 Sum_probs=32.1
Q ss_pred CCCCCCEEEEEcCC---cccHHHHHHHHhhCCCeEEEEcCC
Q 017184 238 FDIKGKRAVVIGRS---NIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 238 i~l~GK~vvVIGrs---~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.+++||.++|.|++ + +|+.++..|+++|++|.++.++
T Consensus 6 ~~~~~k~~lItGas~g~G-IG~a~a~~la~~G~~v~l~~r~ 45 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQS-IAWGCARAFRALGAELAVTYLN 45 (258)
T ss_pred cccCCCEEEEECCCCCCc-HHHHHHHHHHHcCCEEEEEeCC
Confidence 45789999999986 5 5999999999999999888665
No 408
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=93.11 E-value=0.16 Score=47.03 Aligned_cols=78 Identities=26% Similarity=0.386 Sum_probs=47.8
Q ss_pred CCCCEEEEEcC----------------CcccHHHHHHHHhhCCCeEEEEcCCCC--------------------CHHhhc
Q 017184 240 IKGKRAVVIGR----------------SNIVGMPAALLLQREDATVSIVHSRTK--------------------NPEEIT 283 (375)
Q Consensus 240 l~GK~vvVIGr----------------s~~VGkpla~lL~~~gAtVtv~hs~t~--------------------~L~~~l 283 (375)
|+||+|+|-+. ||-.|..+|..+..+||+|+++|..+. .+.+.+
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~p~~~~~i~v~sa~em~~~~~~~~ 80 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPPPPGVKVIRVESAEEMLEAVKELL 80 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----TTEEEEE-SSHHHHHHHHHHHG
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccccccceEEEecchhhhhhhhcccc
Confidence 46888888753 344799999999999999999987631 134567
Q ss_pred cCCcEEEEccCCCCccc----CCCcCC---CcEEEEeeecC
Q 017184 284 RQADIIISAVGQPNMVR----GSWIKP---GAVIIDVGINP 317 (375)
Q Consensus 284 ~~ADIVIsAvG~p~~I~----~~~vk~---gavVIDvgin~ 317 (375)
+++|++|.++-...|-. ..-+|+ ....+.+--+|
T Consensus 81 ~~~Di~I~aAAVsDf~p~~~~~~KIkK~~~~~l~l~L~~~p 121 (185)
T PF04127_consen 81 PSADIIIMAAAVSDFRPEEPAEGKIKKSSGDELTLELKPTP 121 (185)
T ss_dssp GGGSEEEE-SB--SEEESCHHSS-G---TT-CEEEEEEE-G
T ss_pred CcceeEEEecchhheeehhccccccccccCcceEEEEEeCh
Confidence 88999998888766532 244663 35677776555
No 409
>PRK06198 short chain dehydrogenase; Provisional
Probab=93.10 E-value=0.12 Score=48.06 Aligned_cols=38 Identities=24% Similarity=0.327 Sum_probs=33.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCe-EEEEcCCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSRT 276 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAt-Vtv~hs~t 276 (375)
.+++|+++|+|+++-+|+.++..|.++|++ |+++.|+.
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~ 41 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNA 41 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCH
Confidence 368999999999988999999999999998 88887653
No 410
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=93.10 E-value=0.12 Score=47.55 Aligned_cols=36 Identities=25% Similarity=0.346 Sum_probs=32.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
++||+++|.|+++-+|+.++..|+++|++|++..++
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~ 36 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLN 36 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 579999999999999999999999999999887554
No 411
>PLN02778 3,5-epimerase/4-reductase
Probab=93.08 E-value=0.27 Score=47.93 Aligned_cols=54 Identities=17% Similarity=0.198 Sum_probs=41.7
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCC---HHhhcc--CCcEEEEccCC
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---PEEITR--QADIIISAVGQ 295 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~---L~~~l~--~ADIVIsAvG~ 295 (375)
.++++|.|++|.+|..++..|+++|.+|+.....-.+ +...++ +.|+||.+++.
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa~ 67 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDAVKPTHVFNAAGV 67 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHHhcCCCEEEECCcc
Confidence 4789999999999999999999999998865443333 233333 68999987764
No 412
>PRK06181 short chain dehydrogenase; Provisional
Probab=93.04 E-value=0.16 Score=47.35 Aligned_cols=34 Identities=26% Similarity=0.405 Sum_probs=30.5
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~ 34 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARN 34 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999998889999999999999999988765
No 413
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=93.04 E-value=0.15 Score=47.48 Aligned_cols=37 Identities=32% Similarity=0.370 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.++||+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~ 41 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRS 41 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 4789999999999989999999999999999988764
No 414
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=93.03 E-value=0.16 Score=47.74 Aligned_cols=36 Identities=19% Similarity=0.317 Sum_probs=30.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 274 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs 274 (375)
-.|+.++|+|||.|++ |..++..|.+.|. ++++++.
T Consensus 24 ~~L~~~~V~ViG~Ggl-Gs~ia~~La~~Gvg~i~lvD~ 60 (212)
T PRK08644 24 EKLKKAKVGIAGAGGL-GSNIAVALARSGVGNLKLVDF 60 (212)
T ss_pred HHHhCCCEEEECcCHH-HHHHHHHHHHcCCCeEEEEeC
Confidence 3468899999999996 9999999999996 6888753
No 415
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.01 E-value=0.14 Score=48.91 Aligned_cols=36 Identities=22% Similarity=0.383 Sum_probs=31.2
Q ss_pred CCCCEEEEEcCCc--ccHHHHHHHHhhCCCeEEEEcCC
Q 017184 240 IKGKRAVVIGRSN--IVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 240 l~GK~vvVIGrs~--~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
++||.++|.|++. -+|+.+|..|+++|++|+++.++
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~ 42 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQG 42 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCc
Confidence 6899999999983 35999999999999999988654
No 416
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.99 E-value=0.19 Score=47.55 Aligned_cols=36 Identities=22% Similarity=0.302 Sum_probs=30.9
Q ss_pred CCCCCEEEEEcCC--cccHHHHHHHHhhCCCeEEEEcC
Q 017184 239 DIKGKRAVVIGRS--NIVGMPAALLLQREDATVSIVHS 274 (375)
Q Consensus 239 ~l~GK~vvVIGrs--~~VGkpla~lL~~~gAtVtv~hs 274 (375)
+++||.++|.|++ .-+|+.++..|+++|++|+++.+
T Consensus 4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r 41 (257)
T PRK08594 4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYA 41 (257)
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecC
Confidence 5789999999985 23599999999999999998854
No 417
>PRK05875 short chain dehydrogenase; Provisional
Probab=92.99 E-value=0.13 Score=48.38 Aligned_cols=37 Identities=24% Similarity=0.246 Sum_probs=33.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
++++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~ 40 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRN 40 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4789999999998888999999999999999988664
No 418
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=92.98 E-value=0.096 Score=45.07 Aligned_cols=32 Identities=28% Similarity=0.522 Sum_probs=27.5
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcC
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 274 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs 274 (375)
.++|+|+|.|++ |..++..|...|. .+++++.
T Consensus 2 ~~~v~iiG~G~v-Gs~va~~L~~~Gv~~i~lvD~ 34 (135)
T PF00899_consen 2 NKRVLIIGAGGV-GSEVAKNLARSGVGKITLVDD 34 (135)
T ss_dssp T-EEEEESTSHH-HHHHHHHHHHHTTSEEEEEES
T ss_pred CCEEEEECcCHH-HHHHHHHHHHhCCCceeecCC
Confidence 589999999995 9999999999997 7888853
No 419
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=92.97 E-value=0.23 Score=47.88 Aligned_cols=69 Identities=25% Similarity=0.355 Sum_probs=48.8
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------------------CCHHhhccCCcEEEEccCCCC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------KNPEEITRQADIIISAVGQPN 297 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------------------~~L~~~l~~ADIVIsAvG~p~ 297 (375)
+++|||.|.+ |..++..|.+.|.+|+++.+.. .+..+....+|+||.++..+.
T Consensus 2 kI~IiG~G~i-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk~~~ 80 (305)
T PRK12921 2 RIAVVGAGAV-GGTFGGRLLEAGRDVTFLVRPKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVKAYQ 80 (305)
T ss_pred eEEEECCCHH-HHHHHHHHHHCCCceEEEecHHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEecccC
Confidence 6899999885 9999999999999999886610 122334478999999988654
Q ss_pred c---cc--CCCcCCCcEEEEe
Q 017184 298 M---VR--GSWIKPGAVIIDV 313 (375)
Q Consensus 298 ~---I~--~~~vk~gavVIDv 313 (375)
+ +. ..++.++.+||-+
T Consensus 81 ~~~~~~~l~~~~~~~~~ii~~ 101 (305)
T PRK12921 81 LDAAIPDLKPLVGEDTVIIPL 101 (305)
T ss_pred HHHHHHHHHhhcCCCCEEEEe
Confidence 2 11 1245566666655
No 420
>PLN02214 cinnamoyl-CoA reductase
Probab=92.95 E-value=0.24 Score=49.03 Aligned_cols=35 Identities=20% Similarity=0.128 Sum_probs=31.2
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 274 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs 274 (375)
+++|+|+|.|+++.+|+.++..|+++|..|+.+.|
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r 42 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVR 42 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence 57899999999988999999999999999877654
No 421
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=92.94 E-value=0.17 Score=46.87 Aligned_cols=52 Identities=13% Similarity=0.126 Sum_probs=42.4
Q ss_pred EEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-----------------------CCHHhhccCCcEEEEccCCC
Q 017184 245 AVVIGRSNIVGMPAALLLQREDATVSIVHSRT-----------------------KNPEEITRQADIIISAVGQP 296 (375)
Q Consensus 245 vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-----------------------~~L~~~l~~ADIVIsAvG~p 296 (375)
|+|+|+.|.+|++++..|++.+.+|+++.|.. +.|.+.++.+|.||..++..
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~ 75 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPS 75 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcc
Confidence 68999988889999999999889999988763 13556788889998888843
No 422
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=92.91 E-value=0.11 Score=52.48 Aligned_cols=77 Identities=18% Similarity=0.228 Sum_probs=53.8
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhC---CCeEEEEcCCC---------------CCHHhhc-cCCcEEEEccCCCC--cc
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQRE---DATVSIVHSRT---------------KNPEEIT-RQADIIISAVGQPN--MV 299 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~---gAtVtv~hs~t---------------~~L~~~l-~~ADIVIsAvG~p~--~I 299 (375)
++.+|.|||+++.||+-+..+|.++ ..++....+.. .++.+.. .++|+++.|+|.-- -+
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~~~~v~~~~~~~~~~~Dvvf~a~p~~~s~~~ 82 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGGKSVTVQDAAEFDWSQAQLAFFVAGREASAAY 82 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCcceEEEeCchhhccCCCEEEECCCHHHHHHH
Confidence 5678999999999999999999984 35666665431 1222322 67899999997421 12
Q ss_pred cCCCcCCCcEEEEeeecC
Q 017184 300 RGSWIKPGAVIIDVGINP 317 (375)
Q Consensus 300 ~~~~vk~gavVIDvgin~ 317 (375)
-++..+.|+.|||.+-.+
T Consensus 83 ~~~~~~~g~~VIDlS~~f 100 (336)
T PRK08040 83 AEEATNAGCLVIDSSGLF 100 (336)
T ss_pred HHHHHHCCCEEEECChHh
Confidence 233456799999998654
No 423
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=92.87 E-value=0.15 Score=51.85 Aligned_cols=35 Identities=34% Similarity=0.558 Sum_probs=30.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 274 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs 274 (375)
.+++++|+|+|.|++ |..++..|...|. ++++++.
T Consensus 132 ~l~~~~VlvvG~GG~-Gs~ia~~La~~Gvg~i~lvD~ 167 (376)
T PRK08762 132 RLLEARVLLIGAGGL-GSPAALYLAAAGVGTLGIVDH 167 (376)
T ss_pred HHhcCcEEEECCCHH-HHHHHHHHHHcCCCeEEEEeC
Confidence 357899999999996 9999999999997 7888754
No 424
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=92.86 E-value=0.4 Score=46.62 Aligned_cols=92 Identities=25% Similarity=0.318 Sum_probs=61.5
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCe-EEEEcCCC-------------------CC---H
Q 017184 223 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSRT-------------------KN---P 279 (375)
Q Consensus 223 PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAt-Vtv~hs~t-------------------~~---L 279 (375)
+|.....+..+++.++ ..|.+|+|+|.|. +|..+++++...|+. |+++.+.. .+ +
T Consensus 146 ~~~~~ta~~~l~~~~~-~~g~~vlV~G~G~-vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~ 223 (339)
T cd08239 146 LCGIGTAYHALRRVGV-SGRDTVLVVGAGP-VGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEI 223 (339)
T ss_pred cchHHHHHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHH
Confidence 4443444555555544 3599999999865 699999999999998 87765431 11 1
Q ss_pred Hhhcc--CCcEEEEccCCCCccc--CCCcCCCcEEEEeeec
Q 017184 280 EEITR--QADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 316 (375)
Q Consensus 280 ~~~l~--~ADIVIsAvG~p~~I~--~~~vk~gavVIDvgin 316 (375)
.+.+. .+|+||.++|.+..+. -+.++++..++-+|..
T Consensus 224 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 264 (339)
T cd08239 224 RELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEG 264 (339)
T ss_pred HHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCC
Confidence 12222 5899999999765432 2467888788888864
No 425
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=92.85 E-value=0.17 Score=54.64 Aligned_cols=36 Identities=19% Similarity=0.065 Sum_probs=32.1
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.+||.++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn 113 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS 113 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 478999999998888999999999999999987664
No 426
>PRK06197 short chain dehydrogenase; Provisional
Probab=92.84 E-value=0.091 Score=50.74 Aligned_cols=37 Identities=30% Similarity=0.362 Sum_probs=33.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~ 49 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRN 49 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999998888999999999999998887654
No 427
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=92.81 E-value=0.39 Score=49.73 Aligned_cols=52 Identities=37% Similarity=0.353 Sum_probs=43.8
Q ss_pred cccCCHHHHH----HHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEc
Q 017184 221 FIPCTPKGCI----ELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVH 273 (375)
Q Consensus 221 ~~PcT~~gvi----~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~h 273 (375)
-.+.|..|+. +.+++.+.+|+|++|+|=|.|+ ||+-++..|...||.|+.+.
T Consensus 182 r~~aTg~Gv~~~~~~a~~~~g~~l~G~rVaVQG~GN-Vg~~aa~~l~~~GAkvva~s 237 (411)
T COG0334 182 RSEATGYGVFYAIREALKALGDDLEGARVAVQGFGN-VGQYAAEKLHELGAKVVAVS 237 (411)
T ss_pred CCcccceehHHHHHHHHHHcCCCcCCCEEEEECccH-HHHHHHHHHHHcCCEEEEEE
Confidence 3478888864 5556678889999999999999 59999999999999988774
No 428
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=92.80 E-value=0.12 Score=51.99 Aligned_cols=111 Identities=23% Similarity=0.313 Sum_probs=63.7
Q ss_pred EEEEcCCcccHHHHHHHHhhCCC--eEEEEcCCC-------------------------CCHHhhccCCcEEEEccCCCC
Q 017184 245 AVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT-------------------------KNPEEITRQADIIISAVGQPN 297 (375)
Q Consensus 245 vvVIGrs~~VGkpla~lL~~~gA--tVtv~hs~t-------------------------~~L~~~l~~ADIVIsAvG~p~ 297 (375)
|+|+|. |.||+.++..|.+.+- +|++..|+. .+|.+.++++|+||+++|...
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~ 79 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF 79 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence 688999 4569999999988763 788887652 126788999999999998652
Q ss_pred c--ccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCC-CCccHHHHHHHHHHHHHHHH
Q 017184 298 M--VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVP-GGVGPMTIAMLLSNTLTSAK 369 (375)
Q Consensus 298 ~--I~~~~vk~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVP-GGVGp~T~amLl~N~v~a~~ 369 (375)
- +-...++-|.-.||..+-. ...-. +++.++.++. |=++ =|.-|--+.++...+++.+.
T Consensus 80 ~~~v~~~~i~~g~~yvD~~~~~----------~~~~~--l~~~a~~~g~-~~l~~~G~~PGl~~~~a~~~~~~~~ 141 (386)
T PF03435_consen 80 GEPVARACIEAGVHYVDTSYVT----------EEMLA--LDEEAKEAGV-TALPGCGFDPGLSNLLARYAADELD 141 (386)
T ss_dssp HHHHHHHHHHHT-EEEESS-HH----------HHHHH--CHHHHHHTTS-EEE-S-BTTTBHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCCeeccchhH----------HHHHH--HHHHHHhhCC-EEEeCcccccchHHHHHHHHHHHhh
Confidence 1 2233456688888854300 00111 1222333332 1122 25666667777777776554
No 429
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=92.76 E-value=0.23 Score=47.29 Aligned_cols=52 Identities=19% Similarity=0.268 Sum_probs=41.5
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCC---CeEEEEcCCC---------------CCHHhhccCCcEEEEccCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQRED---ATVSIVHSRT---------------KNPEEITRQADIIISAVGQ 295 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~g---AtVtv~hs~t---------------~~L~~~l~~ADIVIsAvG~ 295 (375)
.++.|||.|.+ |..++..|.+.| ..|++++++. .+..+.+.++|+||.++..
T Consensus 3 m~I~iIG~G~m-G~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~~~~~~~~~~advVil~v~~ 72 (267)
T PRK11880 3 KKIGFIGGGNM-ASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKP 72 (267)
T ss_pred CEEEEEechHH-HHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeecCChHHHHhcCCEEEEEcCH
Confidence 47999999886 999999999887 6788887752 2445567899999998864
No 430
>PRK12827 short chain dehydrogenase; Provisional
Probab=92.76 E-value=0.18 Score=46.17 Aligned_cols=36 Identities=22% Similarity=0.385 Sum_probs=31.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 274 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs 274 (375)
++++|+++|.|+++-+|+.++..|+++|++|++..+
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~ 38 (249)
T PRK12827 3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDI 38 (249)
T ss_pred CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcC
Confidence 467899999999999999999999999999888543
No 431
>PRK08226 short chain dehydrogenase; Provisional
Probab=92.76 E-value=0.17 Score=47.14 Aligned_cols=37 Identities=22% Similarity=0.362 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.++||+++|.|.++-+|+.++..|+++|++|+++.|+
T Consensus 3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~ 39 (263)
T PRK08226 3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDIS 39 (263)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 3679999999999999999999999999999988765
No 432
>PRK05086 malate dehydrogenase; Provisional
Probab=92.75 E-value=0.3 Score=48.52 Aligned_cols=55 Identities=22% Similarity=0.384 Sum_probs=39.5
Q ss_pred CEEEEEcCCcccHHHHHHHHhh-CC--CeEEEEcCC-----------------------CCCHHhhccCCcEEEEccCCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQR-ED--ATVSIVHSR-----------------------TKNPEEITRQADIIISAVGQP 296 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~-~g--AtVtv~hs~-----------------------t~~L~~~l~~ADIVIsAvG~p 296 (375)
+|++|||+++.||..++..|.. .+ .+++++.+. ..++.+.++++|+||.++|.+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~~ 80 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGVA 80 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCCC
Confidence 5899999965579999988744 22 356665321 124567789999999999975
Q ss_pred C
Q 017184 297 N 297 (375)
Q Consensus 297 ~ 297 (375)
+
T Consensus 81 ~ 81 (312)
T PRK05086 81 R 81 (312)
T ss_pred C
Confidence 4
No 433
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=92.74 E-value=0.16 Score=51.28 Aligned_cols=77 Identities=19% Similarity=0.264 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCC---eEEEEcCCC---------------CCH-HhhccCCcEEEEccCCCCc--c
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDA---TVSIVHSRT---------------KNP-EEITRQADIIISAVGQPNM--V 299 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gA---tVtv~hs~t---------------~~L-~~~l~~ADIVIsAvG~p~~--I 299 (375)
...+|.|+|+++.+|+-+..+|.+++. ++....+.. .++ .+.+.++|+||.|+|.-.. +
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~~~~~~v~~~~~~~~~~~D~vf~a~p~~~s~~~ 85 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFEGRDYTVEELTEDSFDGVDIALFSAGGSISKKF 85 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeecCceeEEEeCCHHHHcCCCEEEECCCcHHHHHH
Confidence 467899999999999999999998653 443332221 111 1345789999999975311 1
Q ss_pred cCCCcCCCcEEEEeeecC
Q 017184 300 RGSWIKPGAVIIDVGINP 317 (375)
Q Consensus 300 ~~~~vk~gavVIDvgin~ 317 (375)
-++..+.|+.|||.+-.+
T Consensus 86 ~~~~~~~g~~VIDlS~~f 103 (344)
T PLN02383 86 GPIAVDKGAVVVDNSSAF 103 (344)
T ss_pred HHHHHhCCCEEEECCchh
Confidence 122346799999998554
No 434
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=92.74 E-value=0.54 Score=44.09 Aligned_cols=94 Identities=22% Similarity=0.227 Sum_probs=61.9
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-------------------CC----H
Q 017184 223 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KN----P 279 (375)
Q Consensus 223 PcT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-------------------~~----L 279 (375)
++-...++..+.+..---.|++++|.|.++.+|..++.++...|++|++..++. .+ +
T Consensus 126 ~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 205 (325)
T cd08253 126 GIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRI 205 (325)
T ss_pred hhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHH
Confidence 333344555555433334699999999877789999999999999987764421 11 1
Q ss_pred Hhhc--cCCcEEEEccCCCCc-ccCCCcCCCcEEEEeeec
Q 017184 280 EEIT--RQADIIISAVGQPNM-VRGSWIKPGAVIIDVGIN 316 (375)
Q Consensus 280 ~~~l--~~ADIVIsAvG~p~~-I~~~~vk~gavVIDvgin 316 (375)
.+.+ +..|+++.++|.... ...++++++..++++|..
T Consensus 206 ~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~ 245 (325)
T cd08253 206 LAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSG 245 (325)
T ss_pred HHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEEEEeec
Confidence 2222 357888888876543 223566777788888864
No 435
>PRK08263 short chain dehydrogenase; Provisional
Probab=92.72 E-value=0.21 Score=47.23 Aligned_cols=35 Identities=14% Similarity=-0.014 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.+|.++|.|+++-+|+.++..|+++|+.|+++.++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~ 36 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARD 36 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 47899999999999999999999999999988765
No 436
>PRK08643 acetoin reductase; Validated
Probab=92.69 E-value=0.16 Score=47.12 Aligned_cols=34 Identities=29% Similarity=0.338 Sum_probs=31.2
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
||.++|+|+++-+|+.++..|+++|++|.++.++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~ 35 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYN 35 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 7899999999999999999999999999888764
No 437
>PLN00106 malate dehydrogenase
Probab=92.68 E-value=0.37 Score=48.39 Aligned_cols=56 Identities=21% Similarity=0.443 Sum_probs=42.3
Q ss_pred CCCEEEEEcC-CcccHHHHHHHHhhCCC--eEEEEcC-----------------------CCCCHHhhccCCcEEEEccC
Q 017184 241 KGKRAVVIGR-SNIVGMPAALLLQREDA--TVSIVHS-----------------------RTKNPEEITRQADIIISAVG 294 (375)
Q Consensus 241 ~GK~vvVIGr-s~~VGkpla~lL~~~gA--tVtv~hs-----------------------~t~~L~~~l~~ADIVIsAvG 294 (375)
..+||+|||+ |. ||..++..|..++. ++.+++. .+.++.+.+++||+||.++|
T Consensus 17 ~~~KV~IiGaaG~-VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG 95 (323)
T PLN00106 17 PGFKVAVLGAAGG-IGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAG 95 (323)
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCC
Confidence 4579999999 55 69999999986552 5555532 13456788999999999999
Q ss_pred CCC
Q 017184 295 QPN 297 (375)
Q Consensus 295 ~p~ 297 (375)
.|.
T Consensus 96 ~~~ 98 (323)
T PLN00106 96 VPR 98 (323)
T ss_pred CCC
Confidence 653
No 438
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.66 E-value=0.18 Score=49.03 Aligned_cols=39 Identities=38% Similarity=0.384 Sum_probs=35.0
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
..+++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~ 45 (306)
T PRK07792 7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVA 45 (306)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 467899999999999999999999999999999988653
No 439
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=92.66 E-value=0.24 Score=48.55 Aligned_cols=51 Identities=27% Similarity=0.413 Sum_probs=38.7
Q ss_pred EEEEcCCcccHHHHHHHHhhCCC-eEEEEcCC--------------------------CCCHHhhccCCcEEEEccCCCC
Q 017184 245 AVVIGRSNIVGMPAALLLQREDA-TVSIVHSR--------------------------TKNPEEITRQADIIISAVGQPN 297 (375)
Q Consensus 245 vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs~--------------------------t~~L~~~l~~ADIVIsAvG~p~ 297 (375)
|.|||+|. ||..++..|+.+|. +|++++.. +.+. +.+++||+||.++|.|.
T Consensus 1 I~IIGaG~-vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d~-~~l~dADiVIit~g~p~ 78 (300)
T cd01339 1 ISIIGAGN-VGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDY-EDIAGSDVVVITAGIPR 78 (300)
T ss_pred CEEECCCH-HHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCCH-HHhCCCCEEEEecCCCC
Confidence 57899966 59999998887764 88887643 1343 45899999999998663
No 440
>PRK07201 short chain dehydrogenase; Provisional
Probab=92.64 E-value=0.17 Score=53.97 Aligned_cols=37 Identities=27% Similarity=0.382 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~ 404 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARN 404 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 5789999999998888999999999999999998765
No 441
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=92.62 E-value=0.19 Score=49.66 Aligned_cols=35 Identities=29% Similarity=0.427 Sum_probs=31.1
Q ss_pred CCCCCCCEEEEEcC---CcccHHHHHHHHhhCCCeEEEE
Q 017184 237 GFDIKGKRAVVIGR---SNIVGMPAALLLQREDATVSIV 272 (375)
Q Consensus 237 ~i~l~GK~vvVIGr---s~~VGkpla~lL~~~gAtVtv~ 272 (375)
+.+++||.++|-|+ +++ |+.+|..|+++||+|.++
T Consensus 4 ~~~l~gk~alITGa~~s~GI-G~a~A~~la~~Ga~Vv~~ 41 (303)
T PLN02730 4 PIDLRGKRAFIAGVADDNGY-GWAIAKALAAAGAEILVG 41 (303)
T ss_pred CcCCCCCEEEEeCCCCCCcH-HHHHHHHHHHCCCEEEEE
Confidence 46799999999999 565 999999999999999883
No 442
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=92.59 E-value=0.21 Score=49.66 Aligned_cols=53 Identities=21% Similarity=0.265 Sum_probs=39.9
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCC--eEEEEcCCC-------------------C------CHHhhccCCcEEEEccCCC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT-------------------K------NPEEITRQADIIISAVGQP 296 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gA--tVtv~hs~t-------------------~------~L~~~l~~ADIVIsAvG~p 296 (375)
||.|||+|. ||.++|..|+.++. ++.+.+.+. . +-.+.+++|||||.++|.|
T Consensus 1 Ki~IIGaG~-VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDivvitaG~~ 79 (307)
T cd05290 1 KLVVIGAGH-VGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVITAGPS 79 (307)
T ss_pred CEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEEEECCCCC
Confidence 589999977 59999999988773 577665321 0 1247799999999999975
Q ss_pred C
Q 017184 297 N 297 (375)
Q Consensus 297 ~ 297 (375)
.
T Consensus 80 ~ 80 (307)
T cd05290 80 I 80 (307)
T ss_pred C
Confidence 3
No 443
>PRK08278 short chain dehydrogenase; Provisional
Probab=92.58 E-value=0.18 Score=47.90 Aligned_cols=37 Identities=27% Similarity=0.442 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKT 39 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 4689999999999999999999999999999888764
No 444
>PRK06444 prephenate dehydrogenase; Provisional
Probab=92.57 E-value=0.22 Score=46.56 Aligned_cols=58 Identities=16% Similarity=0.294 Sum_probs=43.1
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHHhhccCCcEEEEccCCCCcccCCCcCC-CcEEEEeee
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKP-GAVIIDVGI 315 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~~~l~~ADIVIsAvG~p~~I~~~~vk~-gavVIDvgi 315 (375)
+++|||..|-+|+-++..|.+.|..|+ +++||+||.|++..... +++++ ..+++|+|.
T Consensus 2 ~~~iiG~~G~mG~~~~~~~~~~g~~v~------------~~~~DlVilavPv~~~~--~~i~~~~~~v~Dv~S 60 (197)
T PRK06444 2 MEIIIGKNGRLGRVLCSILDDNGLGVY------------IKKADHAFLSVPIDAAL--NYIESYDNNFVEISS 60 (197)
T ss_pred EEEEEecCCcHHHHHHHHHHhCCCEEE------------ECCCCEEEEeCCHHHHH--HHHHHhCCeEEeccc
Confidence 689999955579999999999999886 47899999999853221 12211 137889885
No 445
>PRK06914 short chain dehydrogenase; Provisional
Probab=92.57 E-value=0.17 Score=47.70 Aligned_cols=35 Identities=26% Similarity=0.258 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
++|.++|.|+++-+|+.++..|+++|+.|+++.|+
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~ 36 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRN 36 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCC
Confidence 57899999999999999999999999999887654
No 446
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=92.53 E-value=0.19 Score=51.28 Aligned_cols=35 Identities=26% Similarity=0.489 Sum_probs=30.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEc
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVH 273 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~h 273 (375)
-.+++++|+|||.|++ |.+++..|...|. ++++++
T Consensus 37 ~~l~~~~VliiG~Ggl-G~~v~~~La~~Gvg~i~ivD 72 (370)
T PRK05600 37 ERLHNARVLVIGAGGL-GCPAMQSLASAGVGTITLID 72 (370)
T ss_pred HHhcCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEe
Confidence 4568899999999996 9999999999995 888875
No 447
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=92.47 E-value=0.37 Score=49.34 Aligned_cols=84 Identities=21% Similarity=0.281 Sum_probs=59.0
Q ss_pred HHHHHHhCCCCCCCEEEEEcCC---------cccHHHHHHHHhhCCCeEEEEcCCC-----------CCHHhhccCCcEE
Q 017184 230 IELLHRYGFDIKGKRAVVIGRS---------NIVGMPAALLLQREDATVSIVHSRT-----------KNPEEITRQADII 289 (375)
Q Consensus 230 i~lL~~~~i~l~GK~vvVIGrs---------~~VGkpla~lL~~~gAtVtv~hs~t-----------~~L~~~l~~ADIV 289 (375)
++.+.++-.+++||+|.|+|-+ +.-...++..|.++|++|.+..-.. .++.+.++.||.|
T Consensus 301 ~~~~~~~l~~~~~~~v~vlGlafK~~t~d~r~sp~~~~~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~ad~~ 380 (411)
T TIGR03026 301 VEKILDLLGPLKGKTVLILGLAFKPNTDDVRESPALDIIELLKEKGAKVKAYDPLVPEEEVKGLPLIDDLEEALKGADAL 380 (411)
T ss_pred HHHHHHHhhcccCCEEEEEeeEecCCCCccccChHHHHHHHHHhCCCEEEEECCCCChhhhhhcccCCCHHHHHhCCCEE
Confidence 3333333246899999999953 2236788999999999999885431 4677889999999
Q ss_pred EEccCCCCcccCC--CcCC---CcEEEEe
Q 017184 290 ISAVGQPNMVRGS--WIKP---GAVIIDV 313 (375)
Q Consensus 290 IsAvG~p~~I~~~--~vk~---gavVIDv 313 (375)
|..+..+.|-..+ .+++ .-+|||.
T Consensus 381 v~~t~~~~~~~~~~~~~~~~~~~~~v~D~ 409 (411)
T TIGR03026 381 VILTDHDEFKDLDLEKIKDLMKGKVVVDT 409 (411)
T ss_pred EEecCCHHHhccCHHHHHHhcCCCEEEeC
Confidence 9999998773322 2322 3478883
No 448
>PRK09135 pteridine reductase; Provisional
Probab=92.46 E-value=0.2 Score=45.90 Aligned_cols=36 Identities=25% Similarity=0.259 Sum_probs=32.6
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 467999999999999999999999999999988764
No 449
>PRK05993 short chain dehydrogenase; Provisional
Probab=92.44 E-value=0.16 Score=48.31 Aligned_cols=35 Identities=20% Similarity=0.177 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~ 37 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRK 37 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 47899999998888999999999999999998775
No 450
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=92.41 E-value=0.18 Score=46.96 Aligned_cols=37 Identities=22% Similarity=0.363 Sum_probs=33.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.++||+++|+|.++-+|+.++..|.++|++|.++.++
T Consensus 8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~ 44 (255)
T PRK06113 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN 44 (255)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 4689999999999999999999999999998877654
No 451
>PRK07677 short chain dehydrogenase; Provisional
Probab=92.39 E-value=0.18 Score=46.98 Aligned_cols=34 Identities=26% Similarity=0.278 Sum_probs=31.1
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
||+++|.|.++-+|+.++..|+++|++|+++.++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~ 34 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRT 34 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 6899999999999999999999999999888765
No 452
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=92.39 E-value=0.24 Score=48.57 Aligned_cols=37 Identities=32% Similarity=0.443 Sum_probs=34.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
...+|+++|-|+|.=+|+.+|..|+++|++|+++.|+
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~ 39 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARR 39 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 4578999999999989999999999999999999886
No 453
>PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=92.38 E-value=0.32 Score=49.74 Aligned_cols=105 Identities=20% Similarity=0.225 Sum_probs=66.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCCHH--------------hhccCCcEEEEccCCCCccc--CCCc
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPE--------------EITRQADIIISAVGQPNMVR--GSWI 304 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~L~--------------~~l~~ADIVIsAvG~p~~I~--~~~v 304 (375)
..++|+|||-|.+ |+.+|.+|.++|++|+.+..+...+. ....++|+||...|.+..-+ .+-.
T Consensus 2 ~~~~i~iiGlG~~-G~slA~~l~~~G~~V~g~D~~~~~~~~~~~~~~~~~~~~~~~~~~~dlvV~s~gi~~~~~~l~~A~ 80 (418)
T PRK00683 2 GLQRVVVLGLGVT-GKSIARFLAQKGVYVIGVDKSLEALQSCPYIHERYLENAEEFPEQVDLVVRSPGIKKEHPWVQAAI 80 (418)
T ss_pred CCCeEEEEEECHH-HHHHHHHHHHCCCEEEEEeCCccccchhHHHhhhhcCCcHHHhcCCCEEEECCCCCCCcHHHHHHH
Confidence 3578999999997 99999999999999999886543211 12356788887777542100 0112
Q ss_pred CCCcEEEEeeecCCCCCCCCCCceeecccchhhhh-----hhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017184 305 KPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEAC-----EVASAITPVPGGVGPMTIAMLLSNTLTSA 368 (375)
Q Consensus 305 k~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~-----~~a~~iTPVPGGVGp~T~amLl~N~v~a~ 368 (375)
+.|+ +++.|.++-... ...-+ |-|=.|.-|+.-|+.++++..
T Consensus 81 ~~g~-------------------~vv~~~~~~~~~~~~~~~~~I~---ITGT~GKTTTt~ml~~iL~~~ 127 (418)
T PRK00683 81 ASHI-------------------PVVTDIQLAFQTPEFTRYPSLG---ITGSTGKTTTILFLEHLLKRL 127 (418)
T ss_pred HCCC-------------------cEEEHHHHHHhhhhcCCCCEEE---EECCCChHHHHHHHHHHHHHc
Confidence 3343 233333321100 01122 458889999999999998764
No 454
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=92.36 E-value=0.18 Score=53.44 Aligned_cols=32 Identities=22% Similarity=0.256 Sum_probs=29.0
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
++|.|||.|.+ |.++|..|++.|..|++.+++
T Consensus 6 ~kV~VIGaG~M-G~gIA~~la~aG~~V~l~d~~ 37 (503)
T TIGR02279 6 VTVAVIGAGAM-GAGIAQVAASAGHQVLLYDIR 37 (503)
T ss_pred cEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCC
Confidence 67999999875 999999999999999999765
No 455
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=92.33 E-value=0.35 Score=47.91 Aligned_cols=54 Identities=30% Similarity=0.496 Sum_probs=41.1
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCC--eEEEEcCCC----------------------------CCHHhhccCCcEEEEc
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT----------------------------KNPEEITRQADIIISA 292 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gA--tVtv~hs~t----------------------------~~L~~~l~~ADIVIsA 292 (375)
++|.|+|+++.||..++..|+..|. +|+.+.+.. .+ .+.+++|||||.+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d-~~~l~~aDiViit 79 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD-LSDVAGSDIVIIT 79 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCC-HHHhCCCCEEEEe
Confidence 4799999955579999999998874 477766421 12 3458999999999
Q ss_pred cCCCC
Q 017184 293 VGQPN 297 (375)
Q Consensus 293 vG~p~ 297 (375)
+|.|.
T Consensus 80 ag~p~ 84 (309)
T cd05294 80 AGVPR 84 (309)
T ss_pred cCCCC
Confidence 99764
No 456
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=92.32 E-value=0.19 Score=53.26 Aligned_cols=71 Identities=17% Similarity=0.286 Sum_probs=51.5
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------------------------------CCHHhhcc
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------------------KNPEEITR 284 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------------------------------~~L~~~l~ 284 (375)
++|.|||.|.+ |.++|..|++.|..|++.+++. .++. .+.
T Consensus 8 ~~V~VIGaG~M-G~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~-~~~ 85 (507)
T PRK08268 8 ATVAVIGAGAM-GAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEALA-DLA 85 (507)
T ss_pred CEEEEECCCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHH-HhC
Confidence 68999999875 9999999999999999997652 1332 357
Q ss_pred CCcEEEEccCCCCcccC-------CCcCCCcEE-EEeee
Q 017184 285 QADIIISAVGQPNMVRG-------SWIKPGAVI-IDVGI 315 (375)
Q Consensus 285 ~ADIVIsAvG~p~~I~~-------~~vk~gavV-IDvgi 315 (375)
+||+||.++....-++. ...++++++ .|...
T Consensus 86 ~aDlViEav~E~~~vK~~vf~~l~~~~~~~ailasntSt 124 (507)
T PRK08268 86 DCDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSS 124 (507)
T ss_pred CCCEEEEcCcccHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 99999999885432322 234677766 35554
No 457
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.31 E-value=0.23 Score=45.81 Aligned_cols=36 Identities=28% Similarity=0.310 Sum_probs=31.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 274 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs 274 (375)
.+++|+++|.|+++-+|+.++..|+++|++|.++.+
T Consensus 2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~ 37 (253)
T PRK08642 2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYH 37 (253)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcC
Confidence 367899999999988999999999999999987644
No 458
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=92.31 E-value=0.21 Score=50.51 Aligned_cols=35 Identities=26% Similarity=0.475 Sum_probs=30.2
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEc
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVH 273 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~h 273 (375)
-.|++++|+|||.|++ |.+++..|...|. ++++++
T Consensus 24 ~~L~~~~VlivG~GGl-Gs~~a~~La~~Gvg~i~lvD 59 (355)
T PRK05597 24 QSLFDAKVAVIGAGGL-GSPALLYLAGAGVGHITIID 59 (355)
T ss_pred HHHhCCeEEEECCCHH-HHHHHHHHHHcCCCeEEEEe
Confidence 3468899999999996 9999999999985 788874
No 459
>PRK07806 short chain dehydrogenase; Provisional
Probab=92.30 E-value=0.23 Score=45.82 Aligned_cols=36 Identities=31% Similarity=0.396 Sum_probs=32.2
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~ 39 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQ 39 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 679999999998878999999999999999887664
No 460
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=92.29 E-value=0.13 Score=47.69 Aligned_cols=37 Identities=30% Similarity=0.358 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.++||+++|.|.++-+|..++..|+++|++|+++.++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~ 45 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRT 45 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCC
Confidence 3689999999999999999999999999999888765
No 461
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=92.29 E-value=0.36 Score=48.03 Aligned_cols=75 Identities=23% Similarity=0.303 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCC-eEEEEcCC-------------------CCCHHh----hcc-CCcEEEEccCC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR-------------------TKNPEE----ITR-QADIIISAVGQ 295 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gA-tVtv~hs~-------------------t~~L~~----~l~-~ADIVIsAvG~ 295 (375)
.|++|+|.|.|. +|..+++++...|+ .|+++.++ ..++.+ .+. .+|+||.++|.
T Consensus 191 ~g~~VlV~G~G~-vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~ 269 (371)
T cd08281 191 PGQSVAVVGLGG-VGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGS 269 (371)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCC
Confidence 589999999765 69999999989998 57766432 112222 221 47999999997
Q ss_pred CCccc--CCCcCCCcEEEEeeec
Q 017184 296 PNMVR--GSWIKPGAVIIDVGIN 316 (375)
Q Consensus 296 p~~I~--~~~vk~gavVIDvgin 316 (375)
+..+. -+.++++..++-+|..
T Consensus 270 ~~~~~~~~~~l~~~G~iv~~G~~ 292 (371)
T cd08281 270 VPALETAYEITRRGGTTVTAGLP 292 (371)
T ss_pred hHHHHHHHHHHhcCCEEEEEccC
Confidence 65433 2467787778888854
No 462
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]
Probab=92.28 E-value=0.18 Score=52.46 Aligned_cols=37 Identities=30% Similarity=0.416 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.+++||+|+|||+|.. |--++..|...|++||+.-|+
T Consensus 171 ~~~~GKrV~VIG~GaS-A~di~~~l~~~ga~vt~~qRs 207 (443)
T COG2072 171 EDLRGKRVLVIGAGAS-AVDIAPELAEVGASVTLSQRS 207 (443)
T ss_pred cccCCCeEEEECCCcc-HHHHHHHHHhcCCeeEEEecC
Confidence 5899999999999998 999999999999999999765
No 463
>PRK11303 DNA-binding transcriptional regulator FruR; Provisional
Probab=92.28 E-value=3 Score=40.04 Aligned_cols=93 Identities=14% Similarity=0.238 Sum_probs=57.2
Q ss_pred eeeecHH----HHHHHHHHHHHHHHHhH-------h--ccCCCceEEEEEeC-CCcchHHHHHHHHHHHHHcCCeEEEEe
Q 017184 85 KVIDGKA----VAKQIRDEITGEVSRMK-------D--AIGVVPGLAVILVG-DRKDSATYVRNKKKACQSVGINSFEVH 150 (375)
Q Consensus 85 ~ildGk~----la~~i~~~lk~~v~~l~-------~--~~g~~P~LaiI~vG-~d~aS~~Yv~~k~k~a~~~GI~~~~~~ 150 (375)
++|+|++ |+++.++.+.+.+++|- . +.+....++++.-. +++--....+...+.|++.|.+.....
T Consensus 19 rvLn~~~~~~~Vs~~tr~rV~~~a~elgY~pn~~a~~l~~~~~~~Igvv~~~~~~~~~~~l~~gi~~~~~~~g~~~~~~~ 98 (328)
T PRK11303 19 YVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGRTRSIGLIIPDLENTSYARIAKYLERQARQRGYQLLIAC 98 (328)
T ss_pred HHHcCCCCCCCcCHHHHHHHHHHHHHhCCCCCHHHHHhhcCCCceEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEEe
Confidence 5688875 88888888877777651 0 01223345555432 233334445678889999999987654
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCccEEEEeC
Q 017184 151 LPEDTSEQEVLKHISVFNDDPSVHGILVQL 180 (375)
Q Consensus 151 l~~~vs~~el~~~I~~LN~D~~V~GIlVql 180 (375)
... +.+...+.++.+.. .+++||++.-
T Consensus 99 ~~~--~~~~~~~~~~~l~~-~~vdgiIi~~ 125 (328)
T PRK11303 99 SDD--QPDNEMRCAEHLLQ-RQVDALIVST 125 (328)
T ss_pred CCC--CHHHHHHHHHHHHH-cCCCEEEEcC
Confidence 432 23334456666654 3799999853
No 464
>PRK07109 short chain dehydrogenase; Provisional
Probab=92.27 E-value=0.13 Score=51.07 Aligned_cols=37 Identities=27% Similarity=0.297 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.+++|+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~ 41 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARG 41 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4689999999998889999999999999999998765
No 465
>PRK07577 short chain dehydrogenase; Provisional
Probab=92.22 E-value=0.25 Score=45.04 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.+|+++|.|.++-+|+.++..|+++|++|+++.|+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~ 36 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARS 36 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 57999999999999999999999999999988775
No 466
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=92.21 E-value=0.24 Score=46.07 Aligned_cols=33 Identities=15% Similarity=0.075 Sum_probs=29.2
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
++++|+|+++-+|+.++..|+++|++|+++.++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~ 33 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRR 33 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 468999998889999999999999999887664
No 467
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=92.18 E-value=0.34 Score=48.30 Aligned_cols=93 Identities=25% Similarity=0.320 Sum_probs=58.0
Q ss_pred cCCHHHHHHHHHH-hCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-------------------CCHHhh
Q 017184 223 PCTPKGCIELLHR-YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEEI 282 (375)
Q Consensus 223 PcT~~gvi~lL~~-~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-------------------~~L~~~ 282 (375)
|++..-.+.+|.. ++... |.+|+|.|+++-||..+.+++...|++|.+.-++. .++.+.
T Consensus 124 ~~~~~TA~~~l~~~~~l~~-g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~ 202 (326)
T COG0604 124 PLAGLTAWLALFDRAGLKP-GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQ 202 (326)
T ss_pred HHHHHHHHHHHHHhcCCCC-CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHH
Confidence 3333444445544 33333 99999999888899999999999996544332221 123333
Q ss_pred ----c--cCCcEEEEccCCCCcc-cCCCcCCCcEEEEeeec
Q 017184 283 ----T--RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGIN 316 (375)
Q Consensus 283 ----l--~~ADIVIsAvG~p~~I-~~~~vk~gavVIDvgin 316 (375)
+ +..|+|+-.+|...+- .-..++++-.++.+|..
T Consensus 203 v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~ 243 (326)
T COG0604 203 VRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGAL 243 (326)
T ss_pred HHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecC
Confidence 3 2578888888865442 23456666667777753
No 468
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=92.15 E-value=0.25 Score=47.23 Aligned_cols=53 Identities=15% Similarity=0.255 Sum_probs=41.6
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC---------------------CHHhhccCCcEEEEccCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------------NPEEITRQADIIISAVGQ 295 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~---------------------~L~~~l~~ADIVIsAvG~ 295 (375)
++++|+|+++.+|+.++..|+++|++|+++.++.. ++.+.++..|+||..++.
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~ 74 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAAD 74 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEecee
Confidence 47999999888999999999999999988866421 234556778999977653
No 469
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=92.14 E-value=0.36 Score=47.76 Aligned_cols=76 Identities=26% Similarity=0.363 Sum_probs=53.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCe-EEEEcCC-------------------CCCH----Hhhc--cCCcEEEEcc
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSR-------------------TKNP----EEIT--RQADIIISAV 293 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAt-Vtv~hs~-------------------t~~L----~~~l--~~ADIVIsAv 293 (375)
-.|++|+|.|.|. +|..+++++...|++ |+.+.+. ..+. .+.+ +..|+||.++
T Consensus 175 ~~g~~VlV~G~g~-vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~ 253 (358)
T TIGR03451 175 KRGDSVAVIGCGG-VGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAV 253 (358)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHHHHHHHhCCCCCCEEEECC
Confidence 3589999999755 699999999899985 7665432 1122 1223 2489999999
Q ss_pred CCCCcccC--CCcCCCcEEEEeeec
Q 017184 294 GQPNMVRG--SWIKPGAVIIDVGIN 316 (375)
Q Consensus 294 G~p~~I~~--~~vk~gavVIDvgin 316 (375)
|.+..+.. ++++++-.++.+|..
T Consensus 254 g~~~~~~~~~~~~~~~G~iv~~G~~ 278 (358)
T TIGR03451 254 GRPETYKQAFYARDLAGTVVLVGVP 278 (358)
T ss_pred CCHHHHHHHHHHhccCCEEEEECCC
Confidence 97654322 467888888888864
No 470
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.11 E-value=0.19 Score=47.99 Aligned_cols=36 Identities=25% Similarity=0.404 Sum_probs=30.9
Q ss_pred CCCCEEEEEcCCc--ccHHHHHHHHhhCCCeEEEEcCC
Q 017184 240 IKGKRAVVIGRSN--IVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 240 l~GK~vvVIGrs~--~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
++||.++|.|+|. -+|++++..|+++|++|+++.++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~ 41 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN 41 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc
Confidence 6899999999872 35999999999999999887654
No 471
>COG0059 IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=92.07 E-value=0.27 Score=49.24 Aligned_cols=79 Identities=25% Similarity=0.328 Sum_probs=58.2
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC--------------CCHHhhccCCcEEEEccCC---CCcccC-
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQ---PNMVRG- 301 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t--------------~~L~~~l~~ADIVIsAvG~---p~~I~~- 301 (375)
|+||+|+|||.|.- |++=++.|...|.+|++--|.- .+..+.+++||+|..-++- +.....
T Consensus 16 LkgK~iaIIGYGsQ-G~ahalNLRDSGlnViiGlr~g~~s~~kA~~dGf~V~~v~ea~k~ADvim~L~PDe~q~~vy~~~ 94 (338)
T COG0059 16 LKGKKVAIIGYGSQ-GHAQALNLRDSGLNVIIGLRKGSSSWKKAKEDGFKVYTVEEAAKRADVVMILLPDEQQKEVYEKE 94 (338)
T ss_pred hcCCeEEEEecChH-HHHHHhhhhhcCCcEEEEecCCchhHHHHHhcCCEeecHHHHhhcCCEEEEeCchhhHHHHHHHH
Confidence 68999999999986 9999999999999999986652 3577999999999999883 222221
Q ss_pred --CCcCCCc-EEEEeeecCCC
Q 017184 302 --SWIKPGA-VIIDVGINPVE 319 (375)
Q Consensus 302 --~~vk~ga-vVIDvgin~~~ 319 (375)
..+++|+ +.+-=|+|...
T Consensus 95 I~p~Lk~G~aL~FaHGfNihf 115 (338)
T COG0059 95 IAPNLKEGAALGFAHGFNIHF 115 (338)
T ss_pred hhhhhcCCceEEeccccceec
Confidence 2456664 44445555543
No 472
>PRK07985 oxidoreductase; Provisional
Probab=92.03 E-value=0.24 Score=47.95 Aligned_cols=36 Identities=33% Similarity=0.457 Sum_probs=32.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 274 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs 274 (375)
.++||+++|.|+++-+|+.++..|+++|++|++..+
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~ 81 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYL 81 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecC
Confidence 589999999999998999999999999999988754
No 473
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=92.02 E-value=0.34 Score=45.58 Aligned_cols=52 Identities=21% Similarity=0.408 Sum_probs=41.8
Q ss_pred EEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCC----------------CHHhhccCCcEEEEccCCC
Q 017184 245 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------------NPEEITRQADIIISAVGQP 296 (375)
Q Consensus 245 vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~----------------~L~~~l~~ADIVIsAvG~p 296 (375)
|+|.|+++-+|..++..|+++|.+|+...|+.. .+.+.+.+.|+||..+|.+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vvh~a~~~ 68 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGYKPWAPLAESEALEGADAVINLAGEP 68 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceeeecccccchhhhcCCCCEEEECCCCC
Confidence 589999999999999999999999998876532 1234567899999888754
No 474
>PRK06701 short chain dehydrogenase; Provisional
Probab=91.97 E-value=0.24 Score=47.87 Aligned_cols=38 Identities=32% Similarity=0.461 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.+++||+++|.|+++-+|..++..|+++|++|+++.++
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~ 79 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLD 79 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999999989999999999999999888664
No 475
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=91.96 E-value=0.26 Score=38.50 Aligned_cols=32 Identities=31% Similarity=0.419 Sum_probs=29.2
Q ss_pred EEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 244 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 244 ~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
+++|||.|.+ |--+|..|.+.|.+||++++..
T Consensus 1 ~vvViGgG~i-g~E~A~~l~~~g~~vtli~~~~ 32 (80)
T PF00070_consen 1 RVVVIGGGFI-GIELAEALAELGKEVTLIERSD 32 (80)
T ss_dssp EEEEESSSHH-HHHHHHHHHHTTSEEEEEESSS
T ss_pred CEEEECcCHH-HHHHHHHHHHhCcEEEEEeccc
Confidence 6899999886 9999999999999999998864
No 476
>PRK08267 short chain dehydrogenase; Provisional
Probab=91.95 E-value=0.19 Score=46.94 Aligned_cols=33 Identities=24% Similarity=0.300 Sum_probs=30.2
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
|+++|+|+++-+|+.++..|+++|++|.++.++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~ 34 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDIN 34 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 789999999999999999999999999988654
No 477
>PRK12744 short chain dehydrogenase; Provisional
Probab=91.93 E-value=0.21 Score=46.63 Aligned_cols=35 Identities=26% Similarity=0.345 Sum_probs=30.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEc
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVH 273 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~h 273 (375)
.++||+++|.|.++-+|+.++..|+++|++|.+++
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~ 39 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIH 39 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEe
Confidence 46899999999999999999999999999955554
No 478
>PRK09620 hypothetical protein; Provisional
Probab=91.92 E-value=0.4 Score=45.74 Aligned_cols=59 Identities=22% Similarity=0.310 Sum_probs=44.0
Q ss_pred CCCCEEEEEcCC----------------cccHHHHHHHHhhCCCeEEEEcCCC----C---------------C----HH
Q 017184 240 IKGKRAVVIGRS----------------NIVGMPAALLLQREDATVSIVHSRT----K---------------N----PE 280 (375)
Q Consensus 240 l~GK~vvVIGrs----------------~~VGkpla~lL~~~gAtVtv~hs~t----~---------------~----L~ 280 (375)
++||+|+|-+.+ |-+|..+|..|+.+|++|++++... . + +.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~ 80 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMK 80 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHH
Confidence 479999998664 6679999999999999999887531 1 1 12
Q ss_pred hhc--cCCcEEEEccCCCCc
Q 017184 281 EIT--RQADIIISAVGQPNM 298 (375)
Q Consensus 281 ~~l--~~ADIVIsAvG~p~~ 298 (375)
+.+ .++|+||-++..+.|
T Consensus 81 ~~~~~~~~D~VIH~AAvsD~ 100 (229)
T PRK09620 81 SIITHEKVDAVIMAAAGSDW 100 (229)
T ss_pred HHhcccCCCEEEECccccce
Confidence 334 358999988876655
No 479
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=91.92 E-value=0.18 Score=50.55 Aligned_cols=76 Identities=14% Similarity=0.182 Sum_probs=51.1
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCC-CeEEEEcCC-CCC---HHhhccCCcEEEEccCCCC--cccCCCcCCCcEEEEeee
Q 017184 243 KRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSR-TKN---PEEITRQADIIISAVGQPN--MVRGSWIKPGAVIIDVGI 315 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~g-AtVtv~hs~-t~~---L~~~l~~ADIVIsAvG~p~--~I~~~~vk~gavVIDvgi 315 (375)
-+|.|||+++.+|.-+..+|.++. .++.-..++ ..+ .++...++|+||.|.+.-. -+-+...+.|..|||.+-
T Consensus 3 ~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~~~~~~~~~~~~~DvvFlalp~~~s~~~~~~~~~~g~~VIDlSa 82 (313)
T PRK11863 3 PKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRKDAAARRELLNAADVAILCLPDDAAREAVALIDNPATRVIDAST 82 (313)
T ss_pred cEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCCcccCchhhhcCCCEEEECCCHHHHHHHHHHHHhCCCEEEECCh
Confidence 479999999999999999998876 243333222 222 2344468999999996321 122233467999999997
Q ss_pred cCC
Q 017184 316 NPV 318 (375)
Q Consensus 316 n~~ 318 (375)
.+.
T Consensus 83 dfR 85 (313)
T PRK11863 83 AHR 85 (313)
T ss_pred hhh
Confidence 654
No 480
>PRK07831 short chain dehydrogenase; Provisional
Probab=91.90 E-value=0.25 Score=46.30 Aligned_cols=37 Identities=24% Similarity=0.210 Sum_probs=31.1
Q ss_pred CCCCCEEEEEcCCc-ccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSN-IVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~-~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.++||+++|.|.++ -+|+.++..|+++|++|+++.++
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~ 51 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIH 51 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCC
Confidence 35789999999853 36999999999999999988654
No 481
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=91.89 E-value=0.38 Score=48.12 Aligned_cols=55 Identities=16% Similarity=0.306 Sum_probs=41.2
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCC-------eEEEEcCC--------------------------CCCHHhhccCCcEE
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDA-------TVSIVHSR--------------------------TKNPEEITRQADII 289 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gA-------tVtv~hs~--------------------------t~~L~~~l~~ADIV 289 (375)
++|.|||+++.||..++..|...|. ++.+.+.+ +.+..+.+++||||
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDiv 82 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDADWA 82 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCCEE
Confidence 5899999955579999999987763 46666542 01335779999999
Q ss_pred EEccCCCC
Q 017184 290 ISAVGQPN 297 (375)
Q Consensus 290 IsAvG~p~ 297 (375)
|.++|.|.
T Consensus 83 vitaG~~~ 90 (322)
T cd01338 83 LLVGAKPR 90 (322)
T ss_pred EEeCCCCC
Confidence 99999753
No 482
>PLN02206 UDP-glucuronate decarboxylase
Probab=91.87 E-value=0.36 Score=50.19 Aligned_cols=58 Identities=28% Similarity=0.298 Sum_probs=44.0
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC----C----------------C-HHhhccCCcEEEEccC
Q 017184 237 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----K----------------N-PEEITRQADIIISAVG 294 (375)
Q Consensus 237 ~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t----~----------------~-L~~~l~~ADIVIsAvG 294 (375)
|..-++++|+|.|++|.||+.++..|+++|.+|+++.+.. . | +...+..+|+||..++
T Consensus 114 ~~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~l~~~D~ViHlAa 192 (442)
T PLN02206 114 GLKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPILLEVDQIYHLAC 192 (442)
T ss_pred ccccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChhhcCCCEEEEeee
Confidence 4455789999999999999999999999999998875321 1 1 1233456899997665
No 483
>PRK08303 short chain dehydrogenase; Provisional
Probab=91.86 E-value=0.24 Score=48.52 Aligned_cols=37 Identities=30% Similarity=0.334 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+++||.++|.|++.-+|+.++..|+++|++|+++.++
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 5789999999998778999999999999999988764
No 484
>PRK06720 hypothetical protein; Provisional
Probab=91.83 E-value=0.21 Score=45.19 Aligned_cols=41 Identities=29% Similarity=0.434 Sum_probs=35.1
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN 278 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~ 278 (375)
..++||.++|.|++.-+|+.++..|.++|++|.++.++.+.
T Consensus 12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~ 52 (169)
T PRK06720 12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQES 52 (169)
T ss_pred cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 45789999999998877999999999999999988765433
No 485
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=91.83 E-value=0.23 Score=56.96 Aligned_cols=39 Identities=18% Similarity=0.329 Sum_probs=31.1
Q ss_pred HHhhccCCcEEEEccC----CCCcccCC-C---cCCCc----EEEEeeecC
Q 017184 279 PEEITRQADIIISAVG----QPNMVRGS-W---IKPGA----VIIDVGINP 317 (375)
Q Consensus 279 L~~~l~~ADIVIsAvG----~p~~I~~~-~---vk~ga----vVIDvgin~ 317 (375)
++++++.||+||+++- .|.+|+.+ + +|+|. +|+||.+..
T Consensus 291 ~~~~~~~advlIn~i~~~~~~P~lvt~~~~~~~mk~G~~~l~vI~DVs~D~ 341 (1042)
T PLN02819 291 HEKIAPYASVIVNCMYWEKRFPRLLTTKQLQDLTRKGGCPLVGVCDITCDI 341 (1042)
T ss_pred HHHhHhhCCEEEeeeecCCCCCceeCHHHHHHhhcCCCccceEEEEEccCC
Confidence 4578899999999983 47789887 3 47787 999998774
No 486
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=91.80 E-value=0.59 Score=44.51 Aligned_cols=93 Identities=19% Similarity=0.209 Sum_probs=62.3
Q ss_pred CCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC-----------------C--C----HH
Q 017184 224 CTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-----------------K--N----PE 280 (375)
Q Consensus 224 cT~~gvi~lL~~~~i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t-----------------~--~----L~ 280 (375)
+.+..++..+.+.+..-.|.+++|.|.++.+|..++.++..+|+.|++..+.. . + +.
T Consensus 121 ~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 200 (323)
T cd05282 121 INPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVK 200 (323)
T ss_pred ccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHH
Confidence 33344444454444445688999999988889999999999999877654321 1 1 12
Q ss_pred hhc--cCCcEEEEccCCCCcc-cCCCcCCCcEEEEeeec
Q 017184 281 EIT--RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGIN 316 (375)
Q Consensus 281 ~~l--~~ADIVIsAvG~p~~I-~~~~vk~gavVIDvgin 316 (375)
+.+ +..|+|+.++|..... -.++++++..++++|..
T Consensus 201 ~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~ 239 (323)
T cd05282 201 EATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLL 239 (323)
T ss_pred HHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccC
Confidence 222 3589999998865432 23567888889998854
No 487
>PRK12746 short chain dehydrogenase; Provisional
Probab=91.74 E-value=0.21 Score=46.30 Aligned_cols=34 Identities=35% Similarity=0.484 Sum_probs=31.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEE
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV 272 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~ 272 (375)
++++|+++|.|+++-+|..++..|+++|++|.++
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~ 36 (254)
T PRK12746 3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIH 36 (254)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence 3678999999999999999999999999998775
No 488
>PRK06128 oxidoreductase; Provisional
Probab=91.67 E-value=0.27 Score=47.44 Aligned_cols=36 Identities=22% Similarity=0.479 Sum_probs=32.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 274 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs 274 (375)
.++||+++|.|+++-+|+.++..|+++|++|++..+
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~ 87 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYL 87 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeC
Confidence 478999999999988999999999999999987643
No 489
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=91.61 E-value=0.31 Score=47.68 Aligned_cols=36 Identities=19% Similarity=0.104 Sum_probs=32.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 274 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs 274 (375)
+++||+|+|.|+++-+|..++..|+++|++|+++.+
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r 38 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIR 38 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEec
Confidence 678999999999998999999999999999887643
No 490
>PRK07791 short chain dehydrogenase; Provisional
Probab=91.60 E-value=0.22 Score=47.91 Aligned_cols=35 Identities=26% Similarity=0.388 Sum_probs=32.1
Q ss_pred CCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcC
Q 017184 240 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 274 (375)
Q Consensus 240 l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs 274 (375)
++||.++|.|++.-+|+.++..|+++|++|+++.+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~ 38 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDI 38 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeC
Confidence 68999999999998999999999999999988754
No 491
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=91.50 E-value=0.37 Score=49.20 Aligned_cols=72 Identities=18% Similarity=0.249 Sum_probs=52.2
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCC-------CeEEEEcCC---------------------------------CCCHHh
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQRED-------ATVSIVHSR---------------------------------TKNPEE 281 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~g-------AtVtv~hs~---------------------------------t~~L~~ 281 (375)
-.+|+|||+|.- |.++|..|.++| .+|++..++ |.|+.+
T Consensus 11 ~~ki~ViGaG~w-GtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~tsdl~e 89 (365)
T PTZ00345 11 PLKVSVIGSGNW-GSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGIKLPDNIVAVSDLKE 89 (365)
T ss_pred CCeEEEECCCHH-HHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCCcCCCceEEecCHHH
Confidence 358999999886 999999999886 578775322 246778
Q ss_pred hccCCcEEEEccCCCCc------ccCC-CcCCCcEEEEee
Q 017184 282 ITRQADIIISAVGQPNM------VRGS-WIKPGAVIIDVG 314 (375)
Q Consensus 282 ~l~~ADIVIsAvG~p~~------I~~~-~vk~gavVIDvg 314 (375)
.+++||+||.+++...+ +.+- .+++++++|-+.
T Consensus 90 av~~aDiIvlAVPsq~l~~vl~~l~~~~~l~~~~~iIS~a 129 (365)
T PTZ00345 90 AVEDADLLIFVIPHQFLESVLSQIKENNNLKKHARAISLT 129 (365)
T ss_pred HHhcCCEEEEEcChHHHHHHHHHhccccccCCCCEEEEEe
Confidence 89999999999986432 3321 456676666653
No 492
>PRK08324 short chain dehydrogenase; Validated
Probab=91.49 E-value=0.29 Score=53.35 Aligned_cols=37 Identities=30% Similarity=0.352 Sum_probs=32.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
.+.||+++|.|+++-+|+.++..|.++|++|+++.++
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~ 455 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLD 455 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCC
Confidence 4578999999987778999999999999999988765
No 493
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=91.46 E-value=0.44 Score=51.76 Aligned_cols=33 Identities=27% Similarity=0.484 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 274 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs 274 (375)
.||+|+|||+|-+ |...|..|.+.|+.|+++.+
T Consensus 326 ~~~~VaIIGaGpA-GLsaA~~L~~~G~~V~V~E~ 358 (654)
T PRK12769 326 SDKRVAIIGAGPA-GLACADVLARNGVAVTVYDR 358 (654)
T ss_pred CCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEec
Confidence 6899999999997 99999999999999999965
No 494
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=91.46 E-value=1.5 Score=47.51 Aligned_cols=55 Identities=15% Similarity=0.206 Sum_probs=40.2
Q ss_pred CCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCCCC---HHhhcc--CCcEEEEccCC
Q 017184 241 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---PEEITR--QADIIISAVGQ 295 (375)
Q Consensus 241 ~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t~~---L~~~l~--~ADIVIsAvG~ 295 (375)
..++|+|.|++|-+|+.++..|..+|.+|++....-.| +...++ +.|+||.+++.
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~ 438 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYGKGRLEDRSSLLADIRNVKPTHVFNAAGV 438 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeEEeeccccccHHHHHHHHHhhCCCEEEECCcc
Confidence 45689999999999999999999999888533322222 233333 68999987763
No 495
>PRK06483 dihydromonapterin reductase; Provisional
Probab=91.45 E-value=0.26 Score=45.27 Aligned_cols=35 Identities=14% Similarity=0.202 Sum_probs=31.5
Q ss_pred CCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 242 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 242 GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
+|+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~ 36 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTH 36 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCc
Confidence 58999999988889999999999999999887764
No 496
>PRK05855 short chain dehydrogenase; Validated
Probab=91.39 E-value=0.27 Score=50.96 Aligned_cols=38 Identities=32% Similarity=0.323 Sum_probs=33.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 238 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 238 i~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
..+++++++|+|+++-+|+.++..|+++|++|+++.|+
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~ 348 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDID 348 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35678999999998889999999999999999988765
No 497
>PRK08177 short chain dehydrogenase; Provisional
Probab=91.39 E-value=0.35 Score=44.24 Aligned_cols=34 Identities=21% Similarity=0.206 Sum_probs=30.6
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCCC
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 276 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~t 276 (375)
|+|+|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~ 35 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGP 35 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCC
Confidence 6899999999999999999999999999887653
No 498
>PRK10423 transcriptional repressor RbsR; Provisional
Probab=91.39 E-value=3.2 Score=39.74 Aligned_cols=88 Identities=16% Similarity=0.340 Sum_probs=57.6
Q ss_pred eeeecHH-HHHHHHHHHHHHHHHhHhccCCCc-------------eEEEEEeC-CCcchHHHHHHHHHHHHHcCCeEEEE
Q 017184 85 KVIDGKA-VAKQIRDEITGEVSRMKDAIGVVP-------------GLAVILVG-DRKDSATYVRNKKKACQSVGINSFEV 149 (375)
Q Consensus 85 ~ildGk~-la~~i~~~lk~~v~~l~~~~g~~P-------------~LaiI~vG-~d~aS~~Yv~~k~k~a~~~GI~~~~~ 149 (375)
++|+|+. ++++.++.+.+.+++| |.+| .+++|.-. +++--..+.+...+.|++.|.+....
T Consensus 17 rvLn~~~~vs~~tr~rV~~~a~~l----gY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~ 92 (327)
T PRK10423 17 HVINKDRFVSEAITAKVEAAIKEL----NYAPSALARSLKLNQTRTIGMLITASTNPFYSELVRGVERSCFERGYSLVLC 92 (327)
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHH----CCCccHHHHHHhhCCCCeEEEEeCCCCCCcHHHHHHHHHHHHHHcCCEEEEE
Confidence 4677764 6677777766666655 4444 45555432 34555666788899999999997765
Q ss_pred eCCCCCCHHHHHHHHHHhhcCCCccEEEEe
Q 017184 150 HLPEDTSEQEVLKHISVFNDDPSVHGILVQ 179 (375)
Q Consensus 150 ~l~~~vs~~el~~~I~~LN~D~~V~GIlVq 179 (375)
... -+.++..+.++.+.+ .+|+||++.
T Consensus 93 ~~~--~~~~~~~~~~~~l~~-~~vdGiI~~ 119 (327)
T PRK10423 93 NTE--GDEQRMNRNLETLMQ-KRVDGLLLL 119 (327)
T ss_pred eCC--CCHHHHHHHHHHHHH-cCCCEEEEe
Confidence 433 244445567777655 479999996
No 499
>PRK05442 malate dehydrogenase; Provisional
Probab=91.36 E-value=0.45 Score=47.77 Aligned_cols=54 Identities=19% Similarity=0.354 Sum_probs=40.0
Q ss_pred CEEEEEcCCcccHHHHHHHHhhCCC-------eEEEEcCC--------------------------CCCHHhhccCCcEE
Q 017184 243 KRAVVIGRSNIVGMPAALLLQREDA-------TVSIVHSR--------------------------TKNPEEITRQADII 289 (375)
Q Consensus 243 K~vvVIGrs~~VGkpla~lL~~~gA-------tVtv~hs~--------------------------t~~L~~~l~~ADIV 289 (375)
.||.|||+++.||..++..|...+. ++.+.+.. +.+..+.+++||||
T Consensus 5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~~daDiV 84 (326)
T PRK05442 5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDPNVAFKDADVA 84 (326)
T ss_pred cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecChHHHhCCCCEE
Confidence 5899999955579999998887652 46665531 12345788999999
Q ss_pred EEccCCC
Q 017184 290 ISAVGQP 296 (375)
Q Consensus 290 IsAvG~p 296 (375)
|.++|.|
T Consensus 85 VitaG~~ 91 (326)
T PRK05442 85 LLVGARP 91 (326)
T ss_pred EEeCCCC
Confidence 9999965
No 500
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=91.31 E-value=0.2 Score=48.80 Aligned_cols=37 Identities=22% Similarity=0.199 Sum_probs=32.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHHhhCCCeEEEEcCC
Q 017184 239 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 275 (375)
Q Consensus 239 ~l~GK~vvVIGrs~~VGkpla~lL~~~gAtVtv~hs~ 275 (375)
+..||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~ 39 (322)
T PRK07453 3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRN 39 (322)
T ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 3579999999998888999999999999999888653
Done!