Your job contains 1 sequence.
>017186
MGSTEGTYGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK
NEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTM
ISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASE
ELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQT
RSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG
VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVGTQ
APVQLGSLRAADGKE
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017186
(375 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2150441 - symbol:GME ""GDP-D-mannose 3',5'-epi... 1855 2.0e-191 1
ZFIN|ZDB-GENE-020419-37 - symbol:uxs1 "UDP-glucuronic aci... 306 2.8e-27 1
TIGR_CMR|GSU_1815 - symbol:GSU_1815 "NAD-dependent epimer... 305 3.5e-27 1
UNIPROTKB|E1BMI4 - symbol:UXS1 "Uncharacterized protein" ... 300 1.2e-26 1
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 300 1.2e-26 1
UNIPROTKB|Q8NBZ7 - symbol:UXS1 "UDP-glucuronic acid decar... 300 1.2e-26 1
UNIPROTKB|F1SU22 - symbol:UXS1 "Uncharacterized protein" ... 300 1.2e-26 1
MGI|MGI:1915133 - symbol:Uxs1 "UDP-glucuronate decarboxyl... 300 1.2e-26 1
RGD|628680 - symbol:Uxs1 "UDP-glucuronate decarboxylase 1... 300 1.2e-26 1
UNIPROTKB|Q5PQX0 - symbol:Uxs1 "UDP-glucuronic acid decar... 300 1.2e-26 1
TAIR|locus:2081675 - symbol:AUD1 "AT3G62830" species:3702... 300 1.4e-26 1
UNIPROTKB|E1BV28 - symbol:UXS1 "Uncharacterized protein" ... 298 1.9e-26 1
UNIPROTKB|F1PU61 - symbol:UXS1 "Uncharacterized protein" ... 295 4.0e-26 1
TIGR_CMR|BA_0507 - symbol:BA_0507 "NAD-dependent epimeras... 288 2.2e-25 1
TIGR_CMR|GSU_0627 - symbol:GSU_0627 "GDP-fucose synthetas... 279 2.0e-24 1
TAIR|locus:2053275 - symbol:UXS6 "UDP-XYL synthase 6" spe... 279 2.0e-24 1
TAIR|locus:2078206 - symbol:UXS5 "UDP-XYL synthase 5" spe... 278 2.6e-24 1
FB|FBgn0035848 - symbol:CG7979 species:7227 "Drosophila m... 278 4.9e-24 1
WB|WBGene00005019 - symbol:sqv-1 species:6239 "Caenorhabd... 276 1.2e-23 1
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 271 1.4e-23 1
TAIR|locus:2168539 - symbol:UXS3 "UDP-glucuronic acid dec... 269 2.3e-23 1
TAIR|locus:2030973 - symbol:GER2 species:3702 "Arabidopsi... 251 1.9e-21 1
UNIPROTKB|P32055 - symbol:fcl "Fcl" species:83333 "Escher... 240 4.0e-20 1
TAIR|locus:2197264 - symbol:GER1 ""GDP-4-keto-6-deoxymann... 239 5.3e-20 1
TIGR_CMR|DET_0204 - symbol:DET_0204 "NAD-dependent epimer... 238 6.9e-20 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 234 2.0e-19 1
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 232 3.5e-19 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 234 2.6e-18 1
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 220 3.7e-16 1
TAIR|locus:2202960 - symbol:RHM1 "rhamnose biosynthesis 1... 216 8.8e-15 1
TAIR|locus:2050921 - symbol:GAE4 "UDP-D-glucuronate 4-epi... 212 9.8e-15 1
TIGR_CMR|CJE_1612 - symbol:CJE_1612 "GDP-L-fucose synthet... 142 1.3e-14 2
TIGR_CMR|CBU_0688 - symbol:CBU_0688 "GDP-fucose synthetas... 205 2.2e-14 1
TAIR|locus:2099372 - symbol:RHM3 "rhamnose biosynthesis 3... 212 2.5e-14 1
UNIPROTKB|Q489C2 - symbol:CPS_0592 "Capsular polysacchari... 192 5.2e-14 2
TIGR_CMR|CPS_0592 - symbol:CPS_0592 "capsular polysacchar... 192 5.2e-14 2
TIGR_CMR|CBU_0844 - symbol:CBU_0844 "capsular polysacchar... 201 7.5e-14 1
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 197 2.7e-13 1
UNIPROTKB|P95780 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 196 3.4e-13 1
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 201 4.5e-13 1
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 191 1.1e-12 1
TAIR|locus:2126846 - symbol:GAE3 "UDP-D-glucuronate 4-epi... 194 1.1e-12 1
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 190 1.5e-12 1
TAIR|locus:2139134 - symbol:GAE5 "UDP-D-glucuronate 4-epi... 193 1.5e-12 1
UNIPROTKB|P29782 - symbol:strE "dTDP-glucose 4,6-dehydrat... 178 1.7e-12 2
UNIPROTKB|Q47WH1 - symbol:CPS_4200 "NAD-dependent epimera... 188 1.8e-12 1
TIGR_CMR|CPS_4200 - symbol:CPS_4200 "NAD-dependent epimer... 188 1.8e-12 1
TAIR|locus:2025472 - symbol:GAE2 "UDP-D-glucuronate 4-epi... 191 2.6e-12 1
WB|WBGene00015298 - symbol:C01F1.3 species:6239 "Caenorha... 190 7.1e-12 1
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 175 7.1e-12 2
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 185 7.1e-12 1
TIGR_CMR|BA_5505 - symbol:BA_5505 "UDP-glucose 4-epimeras... 182 1.2e-11 1
UNIPROTKB|Q8E8H8 - symbol:wcvA "UDP-glucuronate 4-epimera... 181 1.7e-11 1
TIGR_CMR|SO_4686 - symbol:SO_4686 "NAD dependent epimeras... 181 1.7e-11 1
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 180 2.3e-11 1
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 180 2.3e-11 1
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 180 2.6e-11 1
TIGR_CMR|CJE_1287 - symbol:CJE_1287 "ADP-L-glycero-D-mann... 177 4.0e-11 1
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 178 4.6e-11 1
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 177 6.0e-11 1
UNIPROTKB|Q47Y09 - symbol:CPS_3643 "NAD-dependent epimera... 175 9.2e-11 1
TIGR_CMR|CPS_3643 - symbol:CPS_3643 "NAD-dependent epimer... 175 9.2e-11 1
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 173 1.5e-10 1
WB|WBGene00018737 - symbol:F53B1.4 species:6239 "Caenorha... 173 1.5e-10 1
TAIR|locus:2118711 - symbol:GAE1 "UDP-D-glucuronate 4-epi... 174 2.2e-10 1
UNIPROTKB|B4E3U7 - symbol:UXS1 "cDNA FLJ57788, highly sim... 152 2.9e-10 1
UNIPROTKB|C9JE50 - symbol:UXS1 "UDP-glucuronic acid decar... 152 2.9e-10 1
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 170 4.1e-10 1
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 166 1.0e-09 1
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 166 1.1e-09 1
TIGR_CMR|GSU_2240 - symbol:GSU_2240 "UDP-glucose 4-epimer... 165 1.1e-09 1
TAIR|locus:2076066 - symbol:GAE6 "UDP-D-glucuronate 4-epi... 162 5.6e-09 1
UNIPROTKB|B0RVL0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 155 1.9e-08 1
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 149 8.6e-08 1
UNIPROTKB|P0C7J0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 149 9.3e-08 1
UNIPROTKB|C9JCB7 - symbol:UXS1 "UDP-glucuronic acid decar... 129 9.5e-08 1
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 148 1.2e-07 1
UNIPROTKB|A0QSK6 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 145 2.3e-07 1
TAIR|locus:2057786 - symbol:3BETAHSD/D2 "3beta-hydroxyste... 126 4.9e-07 2
UNIPROTKB|Q888H1 - symbol:udh "Uncharacterized protein" s... 140 5.1e-07 1
UNIPROTKB|O06329 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 141 6.4e-07 1
UNIPROTKB|Q48N10 - symbol:PSPPH_0937 "Uncharacterized pro... 139 6.6e-07 1
UNIPROTKB|C9JW33 - symbol:UXS1 "UDP-glucuronic acid decar... 131 6.9e-07 1
UNIPROTKB|Q83DM2 - symbol:CBU_0681 "NAD dependent epimera... 125 1.0e-06 2
TIGR_CMR|CBU_0681 - symbol:CBU_0681 "conserved hypothetic... 125 1.0e-06 2
TIGR_CMR|BA_1230 - symbol:BA_1230 "dTDP-glucose 4,6-dehyd... 139 1.0e-06 1
TIGR_CMR|CJE_1273 - symbol:CJE_1273 "UDP-glucose 4-epimer... 137 1.8e-06 1
WB|WBGene00022498 - symbol:hsd-2 species:6239 "Caenorhabd... 134 1.9e-06 2
CGD|CAL0000450 - symbol:GAL102 species:5476 "Candida albi... 136 2.2e-06 1
UNIPROTKB|Q59VY4 - symbol:TGD99 "Putative uncharacterized... 136 2.2e-06 1
UNIPROTKB|P44914 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 136 2.5e-06 1
TIGR_CMR|SO_3167 - symbol:SO_3167 "dTDP-glucose 4,6-dehyd... 136 2.6e-06 1
ZFIN|ZDB-GENE-050417-317 - symbol:zgc:110348 "zgc:110348"... 135 3.6e-06 1
DICTYBASE|DDB_G0281487 - symbol:DDB_G0281487 "3-beta-hydr... 126 3.7e-06 2
TIGR_CMR|BA_3248 - symbol:BA_3248 "3-beta hydroxysteroid ... 119 4.4e-06 2
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 121 4.8e-06 2
TIGR_CMR|CHY_0545 - symbol:CHY_0545 "UDP-glucose 4-epimer... 133 5.1e-06 1
UNIPROTKB|Q9HTB6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 127 5.1e-06 2
UNIPROTKB|P37761 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 133 5.7e-06 1
CGD|CAL0000448 - symbol:GAL10 species:5476 "Candida albic... 139 6.6e-06 2
WARNING: Descriptions of 43 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2150441 [details] [associations]
symbol:GME ""GDP-D-mannose 3',5'-epimerase"" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0047918 "GDP-mannose 3,5-epimerase activity" evidence=ISS;IDA]
[GO:0019853 "L-ascorbic acid biosynthetic process" evidence=TAS]
[GO:0051287 "NAD binding" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] UniPathway:UPA00990 InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0451 Gene3D:3.40.50.720
GO:GO:0051287 GO:GO:0019853 EMBL:AF272706 EMBL:AY057660
EMBL:AY057694 EMBL:AY116953 IPI:IPI00536932 RefSeq:NP_001190417.1
RefSeq:NP_198236.1 UniGene:At.21733 PDB:2C54 PDB:2C59 PDB:2C5A
PDB:2C5E PDBsum:2C54 PDBsum:2C59 PDBsum:2C5A PDBsum:2C5E
ProteinModelPortal:Q93VR3 SMR:Q93VR3 STRING:Q93VR3 PaxDb:Q93VR3
PRIDE:Q93VR3 EnsemblPlants:AT5G28840.1 EnsemblPlants:AT5G28840.2
GeneID:833002 KEGG:ath:AT5G28840 TAIR:At5g28840
HOGENOM:HOG000168017 InParanoid:Q93VR3 KO:K10046 OMA:RKAQTST
PhylomeDB:Q93VR3 ProtClustDB:PLN02695 BioCyc:ARA:AT5G28840-MONOMER
BioCyc:MetaCyc:AT5G28840-MONOMER EvolutionaryTrace:Q93VR3
Genevestigator:Q93VR3 GermOnline:AT5G28840 GO:GO:0047918
Uniprot:Q93VR3
Length = 377
Score = 1855 (658.1 bits), Expect = 2.0e-191, P = 2.0e-191
Identities = 343/377 (90%), Positives = 365/377 (96%)
Query: 1 MGSTEGT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWK 59
MG+T GT YGAYTY+ELERE YWPSE L+IS+TGAGGFIASHIARRLK EGHY+IASDWK
Sbjct: 1 MGTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWK 60
Query: 60 KNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 119
KNEHMTEDMFC EFHLVDLRVM+NCLKVT+GVDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61 KNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
Query: 120 MISFNMLEASRISGVKRFFYASSACIYPEFKQLET-NVSLKESDAWPAEPQDAYGLEKLA 178
MISFNM+EA+RI+G+KRFFYASSACIYPEFKQLET NVSLKESDAWPAEPQDAYGLEKLA
Sbjct: 121 MISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLA 180
Query: 179 SEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGL 238
+EELCKHY KDFGIECR+GRFHNIYGPFGTWKGGREKAPAAFCRKA TSTD+FEMWGDGL
Sbjct: 181 TEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGL 240
Query: 239 QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP 298
QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAE+VLSFE+KKLPIHHIPGP
Sbjct: 241 QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGP 300
Query: 299 EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVG 358
EGVRGRNSDN LIKEKLGWAP+M+LK+GLRITYFWIKEQIEKEK +G D+S+YGSSKVVG
Sbjct: 301 EGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYGSSKVVG 360
Query: 359 TQAPVQLGSLRAADGKE 375
TQAPVQLGSLRAADGKE
Sbjct: 361 TQAPVQLGSLRAADGKE 377
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 89/325 (27%), Positives = 155/325 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 85 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 144
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 145 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 199
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 200 TSEVYGD-----PEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 254
Query: 198 RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT 257
R N +G GR + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 255 RIFNTFGSRMHMNDGR--VVSNFILQALQG-EALTVYGSGSQTRAFQYVSDLVNGLVSLM 311
Query: 258 KSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLG 316
S+ PVN+G+ E ++ E A+++ S + I +P + + R D K LG
Sbjct: 312 NSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLLG 371
Query: 317 WAPSMKLKDGLRITYFWIKEQIEKE 341
W P + L++GL T + ++E +
Sbjct: 372 WEPVVPLEEGLNKTIQYFSRELEHQ 396
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 93/312 (29%), Positives = 146/312 (46%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASD-WKKNEHMTEDMFCHEFHLVDLRVMDNCL 85
+RI VTG GFI SH+ RL +GH ++ D + D +FH ++ D
Sbjct: 1 MRILVTGGAGFIGSHLCERLLEQGHDVLCLDNFFTGSKRNIDRLM-DFHRFEVIRHDIIE 59
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLE-ASRISGVKRFFYASSAC 144
+ VD ++NLA + + Q N + + M + NML A R+ R AS++
Sbjct: 60 PILLEVDRIYNLACPASPVHY-QYNPVKTIKTSVMGTINMLGLAKRVRA--RILQASTSE 116
Query: 145 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG 204
+Y + + + P + Y K +E L Y + G++ R+ R N YG
Sbjct: 117 VYGD-PTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIARIFNTYG 175
Query: 205 PFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-FRE 263
P GR + F +AL D ++GDG QTRSF ++D+ ++G++ L + D F
Sbjct: 176 PRMAEHDGR--VVSNFVVQALRGED-LTVYGDGSQTRSFCYVDDLLDGLVTLMEHDQFCG 232
Query: 264 PVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP-EGVRGRNSDNTLIKEKLGWAPSMK 322
PVN+G+ E + E A +++ I + P P + R R D TL + LGW P +
Sbjct: 233 PVNLGNPEETPIIEFARRIIAMTGSSSQIIYRPLPSDDPRQRQPDITLARTILGWEPRVS 292
Query: 323 LKDGLR--ITYF 332
L +GL I YF
Sbjct: 293 LDEGLAKTIEYF 304
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 88/323 (27%), Positives = 154/323 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI VTG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILVTGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 202 TSEVYGD-----PEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 198 RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT 257
R N +GP GR + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 257 RIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALM 313
Query: 258 KSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLG 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LG
Sbjct: 314 NSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 317 WAPSMKLKDGLRITYFWIKEQIE 339
W P + L++GL + ++++E
Sbjct: 374 WEPVVPLEEGLNKAIHYFRKELE 396
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 87/323 (26%), Positives = 154/323 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 30 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 89
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 90 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 144
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 145 TSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 199
Query: 198 RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT 257
R N +GP GR + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 200 RIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALM 256
Query: 258 KSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLG 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LG
Sbjct: 257 NSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 316
Query: 317 WAPSMKLKDGLRITYFWIKEQIE 339
W P + L++GL + ++++E
Sbjct: 317 WEPVVPLEEGLNKAIHYFRKELE 339
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 87/323 (26%), Positives = 154/323 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 202 TSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 198 RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT 257
R N +GP GR + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 257 RIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALM 313
Query: 258 KSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLG 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LG
Sbjct: 314 NSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 317 WAPSMKLKDGLRITYFWIKEQIE 339
W P + L++GL + ++++E
Sbjct: 374 WEPVVPLEEGLNKAIHYFRKELE 396
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 87/323 (26%), Positives = 154/323 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 64 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 123
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 124 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 178
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 179 TSEVYGD-----PEVHPQTEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 233
Query: 198 RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT 257
R N +GP GR + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 234 RIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALM 290
Query: 258 KSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLG 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LG
Sbjct: 291 NSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 350
Query: 317 WAPSMKLKDGLRITYFWIKEQIE 339
W P + L++GL + ++++E
Sbjct: 351 WEPVVPLEEGLNKAIHYFRKELE 373
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 87/323 (26%), Positives = 154/323 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 202 TSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 198 RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT 257
R N +GP GR + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 257 RIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALM 313
Query: 258 KSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLG 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LG
Sbjct: 314 NSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 317 WAPSMKLKDGLRITYFWIKEQIE 339
W P + L++GL + ++++E
Sbjct: 374 WEPVVPLEEGLNKAIHYFRKELE 396
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 87/323 (26%), Positives = 154/323 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 202 TSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 198 RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT 257
R N +GP GR + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 257 RIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALM 313
Query: 258 KSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLG 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LG
Sbjct: 314 NSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 317 WAPSMKLKDGLRITYFWIKEQIE 339
W P + L++GL + ++++E
Sbjct: 374 WEPVVPLEEGLNKAIHYFRKELE 396
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 87/323 (26%), Positives = 154/323 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 202 TSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 198 RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT 257
R N +GP GR + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 257 RIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALM 313
Query: 258 KSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLG 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LG
Sbjct: 314 NSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 317 WAPSMKLKDGLRITYFWIKEQIE 339
W P + L++GL + ++++E
Sbjct: 374 WEPVVPLEEGLNKAIHYFRKELE 396
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 300 (110.7 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 90/323 (27%), Positives = 150/323 (46%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASD---WKKNEHMTEDMFCHEFHLVDLRVMDN 83
LR+ VTG GF+ SH+ RL + G +I D + E++ F ++ V++
Sbjct: 119 LRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRHDVVEP 178
Query: 84 CLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143
L VD +++LA + + + N + N + + NML ++ G RF S++
Sbjct: 179 ILLE---VDQIYHLACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS 233
Query: 144 CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIY 203
+Y + Q V + P + Y K +E L Y + +E R+ R N Y
Sbjct: 234 EVYGDPLQ-HPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTY 292
Query: 204 GPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFRE 263
GP GR + F +AL + ++GDG QTRSF F+ + VEG++RL + +
Sbjct: 293 GPRMCIDDGR--VVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVG 349
Query: 264 PVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-VRGRNSDNTLIKEKLGWAPSMK 322
P N+G+ +M E+A++V D I P E R D T KE LGW P +
Sbjct: 350 PFNLGNPGEFTMLELAKVVQETIDPNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVS 409
Query: 323 LKDGLRITYFWIKEQIEKEKTQG 345
L+ GL + ++++ ++ +G
Sbjct: 410 LRQGLPLMVKDFRQRVFGDQKEG 432
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 87/323 (26%), Positives = 153/323 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 88 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 147
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 148 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 202
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 203 TSEVYGD-----PEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 257
Query: 198 RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT 257
R N +GP GR + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 258 RIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGPGTQTRAFQYVSDLVNGLVALM 314
Query: 258 KSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLG 316
S+ PVN+G+ E ++ E A+++ I + + + R D K LG
Sbjct: 315 NSNVSSPVNLGNPEEHTILEFAQLIKKLVGSGSEIQFLSEAQDDPQKRKPDIRKAKLLLG 374
Query: 317 WAPSMKLKDGLRITYFWIKEQIE 339
W P + L++GL + ++++E
Sbjct: 375 WEPVVPLEEGLNKAIHYFRKELE 397
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 86/323 (26%), Positives = 153/323 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 81 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 140
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 141 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 195
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 196 TSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 250
Query: 198 RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT 257
R N +GP GR + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 251 RIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALM 307
Query: 258 KSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLG 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K L
Sbjct: 308 NSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIRKAKMMLA 367
Query: 317 WAPSMKLKDGLRITYFWIKEQIE 339
W P + L++GL + ++++E
Sbjct: 368 WEPVVPLEEGLNKAIHYFRKELE 390
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 89/318 (27%), Positives = 154/318 (48%)
Query: 31 VTGAGGFIASHIARRLKSEGHYI-IASDWKKNEHMTEDMFCHEFHLVDLRVMD-NCL-KV 87
+TG GFI SH+A L G+ + I ++ K ++ D E ++ + V+D N + ++
Sbjct: 7 ITGGAGFIGSHLAEELVGRGYNVTIVDNFYKGKNKYHDELMKEIRVIPISVLDKNSIYEL 66
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147
D VF+LAA +G ++ + +I N N+L+A+ + G K+ +AS++ +Y
Sbjct: 67 VNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTR-NILQAA-LKGKKKVVFASTSEVYG 124
Query: 148 EFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFG 207
+ K + + A ++ + +Y + K E LC Y + G+ + R+ NIYGP
Sbjct: 125 KAKPPFSEEGDRLYGA-TSKIRWSYAICKTLEETLCLGYALE-GLPVTIVRYFNIYGPRA 182
Query: 208 TWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFR-EPVN 266
G F AL D ++GDG QTR FT++ + VE +R E +N
Sbjct: 183 K-DGPYAGVIPRFISAALQGEDIL-VYGDGEQTRCFTYVSDAVEATIRAMDEKVNGEIIN 240
Query: 267 IGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-------GPEGVRGRNSDNTLIKEKLGWAP 319
IGS+ S+ E+AE++ D I +P G E + R D T +K+ + +
Sbjct: 241 IGSENEKSIKEVAEVIKKLTDSSSKIVQVPFEEVYPHGFEEIPNRRPDVTKLKDLVQFQA 300
Query: 320 SMKLKDGLRITYFWIKEQ 337
+ +DGL+ T W +E+
Sbjct: 301 KVTWEDGLKETIKWFREE 318
>TIGR_CMR|GSU_0627 [details] [associations]
symbol:GSU_0627 "GDP-fucose synthetase" species:243231
"Geobacter sulfurreducens PCA" [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 OMA:IHCAGRV RefSeq:NP_951685.1 ProteinModelPortal:Q74FI1
SMR:Q74FI1 GeneID:2685221 KEGG:gsu:GSU0627 PATRIC:22024005
ProtClustDB:CLSK827960 BioCyc:GSUL243231:GH27-626-MONOMER
Uniprot:Q74FI1
Length = 314
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 89/319 (27%), Positives = 143/319 (44%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
RI V G G + S I R+L +EG+ + T E L D +
Sbjct: 6 RIYVAGHRGLVGSAIVRKLTAEGYGNLLL-------RTSG----ELDLRDQAAVA-AFFA 53
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147
+ D+VF AA +GG+ + + +Y+N MI N++ +S +GV + + S CIYP
Sbjct: 54 AEQPDYVFLAAAKVGGIVANNTYPAEFIYDNLMIEANVIHSSYRTGVSKLLFLGSTCIYP 113
Query: 148 EFKQLETNVSLKESDAWPAEP-QDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPF 206
K + + P EP +AY + K+A LC+ Y + +G N+YGP
Sbjct: 114 --KMASQPIREEYLLTGPLEPTNEAYAIAKIAGISLCRSYNRQYGTRFIAAMPTNLYGPN 171
Query: 207 GTWKGGREKAPAAFCRK----ALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKS-DF 261
+ + A RK + +WG G R F +D+ + L L + +
Sbjct: 172 DNFDLEKSHVLPALIRKFHEAKIAGAPTVTVWGTGAPLREFIHVDDVADAALYLMRHHEG 231
Query: 262 REPVNIGSDEMVSMNEMA---EIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWA 318
+ VNIGS E +S+ ++A +IV+ FE + + P+G + SD + + LGW
Sbjct: 232 NDIVNIGSGEEISIRDLALLVKIVVGFEGEL--VFDASKPDGTPRKLSDVSRL-HSLGWR 288
Query: 319 PSMKLKDGLRITYFWIKEQ 337
+ L+DG+R TY W Q
Sbjct: 289 HRIGLEDGVRETYEWFVGQ 307
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 92/317 (29%), Positives = 149/317 (47%)
Query: 16 LEREPYWPSEKLRISVTGAGGFIASHIARRL-KSEGHYIIASD--WKKNEHMTEDMFCH- 71
L ++ S +RI VTG GFI SH+ +L ++E + +I +D + ++ + H
Sbjct: 21 LRNSKFFQSN-MRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLKKWIGHP 79
Query: 72 EFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRI 131
F L+ V + L V VD +++LA + F + N + N + + NML ++
Sbjct: 80 RFELIRHDVTEP-LFVE--VDQIYHLACPASPI-FYKYNPVKTIKTNVIGTLNMLGLAKR 135
Query: 132 SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFG 191
G R S++ +Y + + + P + Y K +E L Y + G
Sbjct: 136 VGA-RILLTSTSEVYGD-PLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 193
Query: 192 IECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVE 251
IE R+ R N YGP GR + F +AL + + G QTRSF ++ + VE
Sbjct: 194 IEIRIARIFNTYGPRMNIDDGR--VVSNFIAQALRG-EALTVQKPGTQTRSFCYVSDMVE 250
Query: 252 GVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG-PEGVRGRNSDNTL 310
G++RL + D P+NIG+ +M E+AE V + I + P+ R R D +
Sbjct: 251 GLMRLMEGDQTGPINIGNPGEFTMVELAETVKELIKPDVEIKMVENTPDDPRQRKPDISK 310
Query: 311 IKEKLGWAPSMKLKDGL 327
KE LGW P +KL++GL
Sbjct: 311 AKEVLGWEPKVKLREGL 327
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 87/306 (28%), Positives = 145/306 (47%)
Query: 27 LRISVTGAGGFIASHIARRL-KSEGHYIIASD--WKKNEHMTEDMFCH-EFHLVDLRVMD 82
+RI ++G GFI SH+ +L ++E + +I +D + ++ + H F L+ V +
Sbjct: 29 MRILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTE 88
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
L VD +++LA + F + N + N + + NML ++ G R S+
Sbjct: 89 PLLIE---VDQIYHLACPASPI-FYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 143
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNI 202
+ +Y + + + P + Y K +E L Y + GIE R+ R N
Sbjct: 144 SEVYGD-PLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 202
Query: 203 YGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFR 262
YGP GR + F +AL + + G QTRSF ++ + V+G++RL + D
Sbjct: 203 YGPRMNIDDGR--VVSNFIAQALRG-EALTVQKPGTQTRSFCYVSDMVDGLMRLMEGDDT 259
Query: 263 EPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPSM 321
P+NIG+ +M E+AE V + + I + P+ R R D T KE LGW P +
Sbjct: 260 GPINIGNPGEFTMVELAETVKELINPSIEIKMVENTPDDPRQRKPDITKAKEVLGWEPKV 319
Query: 322 KLKDGL 327
KL++GL
Sbjct: 320 KLREGL 325
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 278 (102.9 bits), Expect = 4.9e-24, P = 4.9e-24
Identities = 86/318 (27%), Positives = 150/318 (47%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVMDNC 84
RI +TG GF+ SH+ L +GH +I D + + E HE F L+ ++ N
Sbjct: 117 RILITGGAGFVGSHLVDDLMVQGHEVIVVDNFFTGRKRNVEHWLGHENFELIHHDIV-NP 175
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLE-ASRISGVKRFFYASSA 143
L + +D +++LA+ ++ + I NTM + N+L A R+ + + AS++
Sbjct: 176 LFIE--IDEIYHLASPASPPHYMYNPVKTIK-TNTMGTINVLGLAKRV--MAKVLIASTS 230
Query: 144 CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIY 203
+Y + + P P+ Y K SE L Y K ++ RV R N Y
Sbjct: 231 EVYGD-PTVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVARIFNTY 289
Query: 204 GPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFRE 263
GP GR + F +AL + + ++G+G QTRSF ++ + V+G++ L S++ +
Sbjct: 290 GPRMHMNDGR--VVSNFILQALRN-ETITVYGNGKQTRSFQYVSDLVDGMIALMASNYTQ 346
Query: 264 PVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-VRGRNSDNTLIKEKLGWAPSMK 322
PVN+G+ ++ E AEI+ I E + R D T ++ L W P +
Sbjct: 347 PVNLGNPVEQTIGEFAEIIKKLVGGPSVIKQSKAMEDDPQRRKPDITRARQLLHWEPKVP 406
Query: 323 LKDGLRITYFWIKEQIEK 340
L+ GL+ T + + ++ +
Sbjct: 407 LETGLQRTISYFRNELAR 424
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 276 (102.2 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 90/325 (27%), Positives = 153/325 (47%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCH-EFHLVDLRVMDNC 84
RI +TG GF+ SH+ +L +GH +IA D + + E H F +V V+ N
Sbjct: 138 RILITGGAGFVGSHLVDKLMLDGHEVIALDNYFTGRKKNVEHWIGHPNFEMVHHDVV-NP 196
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLE-ASRISGVKRFFYASSA 143
V VD +++LA+ ++ + I NT+ + NML A R+ AS++
Sbjct: 197 YFVE--VDQIYHLASPASPPHYMYNPVKTIK-TNTLGTINMLGLAKRVKAT--VLLASTS 251
Query: 144 CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIY 203
+Y + ++ P+ Y K +E L Y K I+ R+ R N +
Sbjct: 252 EVYGD-PEVHPQPETYWGHVNTIGPRACYDEGKRVAESLMVAYNKQENIKIRIARIFNTF 310
Query: 204 GPFGTWKGGREKAPAAFCRKALTSTDK-FEMWGDGLQTRSFTFIDECVEGVLRLTKSDFR 262
GP GR + F +AL DK ++G+G QTRSF ++ + V+G+++L S++
Sbjct: 311 GPRMHMNDGR--VVSNFIIQALQ--DKPITIYGNGTQTRSFQYVTDLVDGLIKLMNSNYS 366
Query: 263 EPVNIGSDEMVSMNEMAEIVLSF-EDKKLPIHHIPGPEG-VRGRNSDNTLIKEKLGWAPS 320
PVNIG+ E ++ + A I+ I ++ + + R D E++ WAP
Sbjct: 367 LPVNIGNPEEHTIGQFATIIRDLVPGSTSEIVNLESQQDDPQQRRPDIRRAAEQISWAPQ 426
Query: 321 MKLKDGLRITYFWIKEQIEKEKTQG 345
+ +KDGL T + + +I++ K G
Sbjct: 427 VHMKDGLLKTVDYFRAEIDRNKRGG 451
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 88/330 (26%), Positives = 149/330 (45%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIA-SDWKKNE---HMTEDMFCHEFHLV--DLRVMD 82
I VTGA GFI SH+ L +G + A S + H+ + F + +V DLR
Sbjct: 4 ILVTGADGFIGSHLCESLVKKGFKVRALSQYNSFNFWGHLEKSPFLKDMEVVSGDLRDSF 63
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
C K+TK +D +F+L A + + + + + N + NMLEA++ + + F + S+
Sbjct: 64 FCEKITKNIDAIFHLGA-LIAIPYSYTAPQSYVDTNVNGTLNMLEAAKKNEISHFIHTST 122
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNI 202
+ +Y T + + P +PQ Y K+A++ + Y F + + R N
Sbjct: 123 SEVYG------TAFYVPIDEKHPLQPQSPYSASKIAADMMALSYYNSFNLNVNIARPFNT 176
Query: 203 YGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK-SDF 261
YGP + R P + L+ + ++ GD R F+ + EG + L F
Sbjct: 177 YGPR---QSARAIIPTIITQ-ILSGAKEIKL-GDLSPKRDLNFVLDTCEGFISLLNLKHF 231
Query: 262 REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNS-------DNTLIKEK 314
E NIGS SM E+ ++ D K+ I I + +R +NS D +K+
Sbjct: 232 GEVYNIGSGVEYSMQEVLNLIQKILDSKVKI--IQDEQRLRPKNSEVFRLCCDANKLKKA 289
Query: 315 LGWAPSMKLKDGLRITYFWIKEQIEKEKTQ 344
W + L++GLR + + KE +E K++
Sbjct: 290 TNWQSKISLEEGLRQSIEYFKENLENYKSE 319
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 84/306 (27%), Positives = 145/306 (47%)
Query: 27 LRISVTGAGGFIASHIARRL-KSEGHYIIASD--WKKNEHMTEDMFCH-EFHLVDLRVMD 82
+RI ++G GFI SH+ +L ++E + ++ +D + ++ + H F L+ V +
Sbjct: 45 MRILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSKENLKKWIGHPRFELIRHDVTE 104
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
L VD +++LA + F + N + N + + NML ++ G R S+
Sbjct: 105 PLLIE---VDRIYHLACPASPI-FYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 159
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNI 202
+ +Y + + + P + Y K +E L Y + GIE R+ R N
Sbjct: 160 SEVYGD-PLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 218
Query: 203 YGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFR 262
YGP GR + F +AL + + G QTRSF ++ + V+G++RL + +
Sbjct: 219 YGPRMNIDDGR--VVSNFIAQALRG-EALTVQKPGTQTRSFCYVSDMVDGLIRLMEGNDT 275
Query: 263 EPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPSM 321
P+NIG+ +M E+AE V + + I + P+ R R D + KE LGW P +
Sbjct: 276 GPINIGNPGEFTMVELAETVKELINPSIEIKMVENTPDDPRQRKPDISKAKEVLGWEPKV 335
Query: 322 KLKDGL 327
KL++GL
Sbjct: 336 KLREGL 341
>TAIR|locus:2030973 [details] [associations]
symbol:GER2 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0006857 "oligopeptide transport" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AC034106 GO:GO:0016853 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:PLN02725 GO:GO:0050577 GO:GO:0042351 EMBL:AY063880
EMBL:AY096364 IPI:IPI00526329 PIR:B86314 RefSeq:NP_564040.1
UniGene:At.15825 ProteinModelPortal:Q9LMU0 SMR:Q9LMU0 STRING:Q9LMU0
PaxDb:Q9LMU0 PRIDE:Q9LMU0 EnsemblPlants:AT1G17890.1 GeneID:838368
KEGG:ath:AT1G17890 GeneFarm:5163 TAIR:At1g17890 InParanoid:Q9LMU0
OMA:IHCAGRV PhylomeDB:Q9LMU0 Genevestigator:Q9LMU0
GermOnline:AT1G17890 Uniprot:Q9LMU0
Length = 328
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 87/341 (25%), Positives = 150/341 (43%)
Query: 12 TYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCH 71
T E++ + + +I V G G + S I R+L+ +G ++ H
Sbjct: 5 TGSEMKSGSFMLEKSAKIFVAGHRGLVGSAIVRKLQDQGF----TNLVLRTHS------- 53
Query: 72 EFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRI 131
E L +++ K V +V AA +GG+ + + + N I N++ ++
Sbjct: 54 ELDLTSQSDVESFFATEKPV-YVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYT 112
Query: 132 SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA-YGLEKLASEELCKHYTKDF 190
GVK+ + S+CIYP+F S + P EP + Y + K+A ++C+ Y
Sbjct: 113 HGVKKLLFLGSSCIYPKFAPQPIPESALLTG--PLEPTNEWYAIAKIAGIKMCQAYRLQH 170
Query: 191 GIECRVGRFHNIYGPFGTWKGGREKAPAAFCRK----ALTSTDKFEMWGDGLQTRSFTFI 246
+ G N+YG + A R+ + D+ +WG G R F +
Sbjct: 171 QWDAISGMPTNLYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHV 230
Query: 247 DECVEGVLRLTK--SDFREPVNIGSDEMVSMNEMAEIV---LSFEDKKLPIHHIPGPEGV 301
D+ + + L S F E VN+GS V++ E+AE+V + F+ K + P+G
Sbjct: 231 DDLADACVFLMDQYSGF-EHVNVGSGVEVTIKELAELVKEVVGFKGKL--VWDTTKPDGT 287
Query: 302 RGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEK 342
+ D++ + LGW P + LKDGL TY W E + ++K
Sbjct: 288 PRKLMDSSKLAS-LGWTPKISLKDGLSQTYEWYLENVVQKK 327
>UNIPROTKB|P32055 [details] [associations]
symbol:fcl "Fcl" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0009242 "colanic acid biosynthetic
process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 UniPathway:UPA00980
InterPro:IPR016040 GO:GO:0005737 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016853
GO:GO:0009103 HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577
GO:GO:0042351 EMBL:U38473 PIR:C64971 RefSeq:NP_416556.1
RefSeq:YP_490294.1 PDB:1BSV PDB:1BWS PDB:1E6U PDB:1E7Q PDB:1E7R
PDB:1E7S PDB:1FXS PDB:1GFS PDBsum:1BSV PDBsum:1BWS PDBsum:1E6U
PDBsum:1E7Q PDBsum:1E7R PDBsum:1E7S PDBsum:1FXS PDBsum:1GFS
ProteinModelPortal:P32055 SMR:P32055 IntAct:P32055
EnsemblBacteria:EBESCT00000000077 EnsemblBacteria:EBESCT00000014550
GeneID:12930697 GeneID:946563 KEGG:ecj:Y75_p2015 KEGG:eco:b2052
PATRIC:32119437 EchoBASE:EB1736 EcoGene:EG11788 OMA:ASVHVMN
ProtClustDB:CLSK880275 BioCyc:EcoCyc:FCL-MONOMER
BioCyc:ECOL316407:JW2037-MONOMER BioCyc:MetaCyc:FCL-MONOMER
EvolutionaryTrace:P32055 Genevestigator:P32055 GO:GO:0009242
Uniprot:P32055
Length = 321
Score = 240 (89.5 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 81/331 (24%), Positives = 144/331 (43%)
Query: 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCL 85
K R+ + G G + S I R+L+ G + T D E +L+D R + +
Sbjct: 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVL-------RTRD----ELNLLDSRAVHDFF 51
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145
++ +D V+ AA +GG+ + + +Y N MI N++ A+ + V + + S+CI
Sbjct: 52 -ASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCI 110
Query: 146 YPEF-KQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG 204
YP+ KQ L + P + Y + K+A +LC+ Y + +G + R N+YG
Sbjct: 111 YPKLAKQPMAESELLQGTLEPTN--EPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYG 168
Query: 205 PFGTWKGGREKAPAAFCRKALTSTDK----FEMWGDGLQTRSFTFIDECVEG---VLRLT 257
P + A R+ +T + +WG G R F +D+ V+ L
Sbjct: 169 PHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVMELA 228
Query: 258 KSDFRE---P----VNIGSDEMVSMNEMAEIVLSFEDKK-LPIHHIPGPEGVRGRNSDNT 309
+ E P +N+G+ ++ E+A+ + K + P+G + D T
Sbjct: 229 HEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVT 288
Query: 310 LIKEKLGWAPSMKLKDGLRITYFWIKEQIEK 340
+ + LGW + L+ GL TY W E ++
Sbjct: 289 RLHQ-LGWYHEISLEAGLASTYQWFLENQDR 318
>TAIR|locus:2197264 [details] [associations]
symbol:GER1
""GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0006005 "L-fucose biosynthetic process"
evidence=IDA] [GO:0019853 "L-ascorbic acid biosynthetic process"
evidence=IMP] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016853 EMBL:AC010556 EMBL:AK228837 EMBL:BT029480
EMBL:AF045286 EMBL:AB034806 IPI:IPI00540212 PIR:F96758
RefSeq:NP_177468.2 UniGene:At.1531 ProteinModelPortal:O49213
SMR:O49213 STRING:O49213 PaxDb:O49213 PRIDE:O49213
EnsemblPlants:AT1G73250.1 GeneID:843659 KEGG:ath:AT1G73250
GeneFarm:5162 TAIR:At1g73250 HOGENOM:HOG000168011 InParanoid:O49213
KO:K02377 OMA:DFISAMP ProtClustDB:PLN02725
BioCyc:ARA:AT1G73250-MONOMER BioCyc:MetaCyc:AT1G73250-MONOMER
Genevestigator:O49213 GermOnline:AT1G73250 GO:GO:0050577
GO:GO:0042351 GO:GO:0006005 Uniprot:O49213
Length = 323
Score = 239 (89.2 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 86/325 (26%), Positives = 145/325 (44%)
Query: 24 SEK-LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD 82
S+K +I V G G + S I R+L+ +G ++ H E L ++
Sbjct: 13 SDKSAKIFVAGHRGLVGSAIVRKLQEQGF----TNLVLKTHA-------ELDLTRQADVE 61
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
+ K V +V AA +GG+ + + + N I N++ ++ GVK+ + S
Sbjct: 62 SFFSQEKPV-YVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYEHGVKKLLFLGS 120
Query: 143 ACIYPEFK-QLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
+CIYP+F Q +L + P + Y + K+A + C+ Y G + G N
Sbjct: 121 SCIYPKFAPQPIPESALLTASLEPTN--EWYAIAKIAGIKTCQAYRIQHGWDAISGMPTN 178
Query: 202 IYGPFGTWKGGREKAPAAFCRK----ALTSTDKFEMWGDGLQTRSFTFIDECVEG-VLRL 256
+YGP + A R+ + ++ +WG G R F +D+ + V L
Sbjct: 179 LYGPNDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLL 238
Query: 257 TKSDFREPVNIGSDEMVSMNEMAEIV---LSFEDKKLPIHHIPGPEGVRGRNSDNTLIKE 313
+ E VNIGS + V++ E+AE+V + FE K L P+G + D++ +
Sbjct: 239 DRYSGLEHVNIGSGQEVTIRELAELVKEVVGFEGK-LG-WDCTKPDGTPRKLMDSSKLAS 296
Query: 314 KLGWAPSMKLKDGLRITYFWIKEQI 338
LGW P + L+DGL TY W + +
Sbjct: 297 -LGWTPKVSLRDGLSQTYDWYLKNV 320
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 238 (88.8 bits), Expect = 6.9e-20, P = 6.9e-20
Identities = 87/325 (26%), Positives = 148/325 (45%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHE---FHLVDLRVMDNCL 85
+ VTG GFI SH+ L S+G + D N + E++ C + +++ + D L
Sbjct: 4 VLVTGGCGFIGSHLVDALLSQGFKVRVMDNLSNGSL-ENLKCGQRDKLEIINGNLTDKFL 62
Query: 86 --KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143
KG + VF+LAA + + + NNT+ + N+LEA R + V R +ASSA
Sbjct: 63 LDSAVKGCETVFHLAAHANVQNSAKDT-GIDLENNTLATHNLLEAMRRNRVDRLVFASSA 121
Query: 144 CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIY 203
+Y E + +++ + D P P YG KLA E L Y+ +G++ + RF NI
Sbjct: 122 AVYGE-----SGLTVLDEDYGPLLPISLYGASKLAGEGLISAYSHLYGLKATMFRFANIV 176
Query: 204 GPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR-LTKSDFR 262
G G F + + + GDG Q++ + + +CV G+L KS
Sbjct: 177 G--SRRHSG---VIYDFVSRLRQNPSSLLVLGDGSQSKPYLHVSDCVAGMLLGFEKSTKN 231
Query: 263 EPV-NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIK------EKL 315
+ N+G+ + V++ ++A +V S K + G G RG D ++ L
Sbjct: 232 LGLYNLGTPDSVAVRDIACLVASEMGLKNVCYSYSG--GERGWQGDAPQVRFDISRIRTL 289
Query: 316 GWAPSMKLKDGLRITYFWIKEQIEK 340
G+ P +++ IKE +++
Sbjct: 290 GFKPKFTSLQAVKLA---IKETLKE 311
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 234 (87.4 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 88/321 (27%), Positives = 145/321 (45%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYII------ASDWKKNEHMTEDMFCHEFHLVDLRV 80
++I VTG GFI S R+ + II A D ++ E + + + ++ + D
Sbjct: 1 MKILVTGGAGFIGSAFVRKYAYDHELIIVDKLTYAGDLRRIEEVRDRIKFYKADVADKTA 60
Query: 81 MDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN--NTMISFNMLEASRISGVKRFF 138
++ K + V + AA+ IQ I N T + ML+ASR G+++F
Sbjct: 61 IEEIFDKEKP-EAVVHFAAESHVDRSIQDPTPFIETNVKGTQV---MLDASRKYGIEKFV 116
Query: 139 YASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGR 198
+ S+ +Y E + E + +ES P P Y + K A++ L + Y + +G+ V R
Sbjct: 117 HISTDEVYGELGK-EGQFT-EES---PLRPNSPYSVSKAAADMLARAYHRTYGLPVIVAR 171
Query: 199 FHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV-LRLT 257
N YGP W+ + P +KAL + + ++G GL R + ++D+C+E V L L
Sbjct: 172 PCNNYGP---WQYPEKLIPVVI-KKALNN-EPIPVYGQGLNVREWLYVDDCIEAVYLLLQ 226
Query: 258 KSDFREPVNIGSDEMVSMNEMAEIVLSFEDK-KLPIHHIPGPEGVRGRNSDNTL-IKEKL 315
K E NIGS E E+ + +L K + I + G R S N+ IK
Sbjct: 227 KGKPGEAYNIGSGEEKGNIEVVKEILRILGKPESLITFVEDRPGHDFRYSLNSKKIKMNY 286
Query: 316 GWAPSMKLKDGLRITYFWIKE 336
W + +G+R W K+
Sbjct: 287 AWKHKVNFNEGIRFVIDWYKK 307
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 232 (86.7 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 88/322 (27%), Positives = 147/322 (45%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASD-----WKKN-EHMTEDMFCHEFHLVDLRV 80
+R VTGA GFI S + RL ++GH ++ D N EH+ ++ H F D+
Sbjct: 1 MRALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADNS-AHVFVEADIVT 59
Query: 81 MD-NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFY 139
D + + + VF+LAA + + ++ N + + + EA+R +GV++ +
Sbjct: 60 ADLHAILEQHRPEVVFHLAAQIDVRRSV-ADPQFDAAVNVIGTVRLAEAARQTGVRKIVH 118
Query: 140 ASSA-CIY---PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
SS IY PE+ ET P +P Y K+A E + +G++C
Sbjct: 119 TSSGGSIYGTPPEYPTPETA---------PTDPASPYAAGKVAGEIYLNTFRHLYGLDCS 169
Query: 196 VGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 255
N+YGP G E A +AL S ++GDG TR + F+D+ V+ +R
Sbjct: 170 HIAPANVYGPRQDPHG--EAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVVDAFVR 227
Query: 256 LTKSDFREPV--NIGSDEMVSMNEM-AEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIK 312
++ +D + NIG+ + S ++ + + + P H P ++ D L +
Sbjct: 228 VS-ADVGGGLRFNIGTGKETSDRQLHSAVAAAVGGPDDPEFHPPRLGDLKRSCLDIGLAE 286
Query: 313 EKLGWAPSMKLKDGLRIT--YF 332
LGW P ++L DG+R T YF
Sbjct: 287 RVLGWRPQIELADGVRRTVEYF 308
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 234 (87.4 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 90/334 (26%), Positives = 151/334 (45%)
Query: 31 VTGAGGFIASHIARRLKSE--GHYIIASDWKKN--EHMTEDMFCHEFHLVDL----RVMD 82
V G G I SH RL E II ++ + E++ + + + D+ D
Sbjct: 11 VIGGAGLIGSHTVDRLLQEDVAEVIIYDNFVRGTRENLAQALRDPRTKIYDIGGDINQTD 70
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
KGVD VF+ AA + + + S N +FN+LE GVKR ++SS
Sbjct: 71 ILNTALKGVDGVFHFAA-LWLLQCYEYPRSAFQ-TNIQGTFNVLETCVAQGVKRLVFSSS 128
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG-RFHN 201
A +Y + LE ++ +A P + YG K+A E + Y +G+ VG R+ N
Sbjct: 129 ASVYGD--ALEEPMT----EAHPFNSRTFYGATKIAGEAMATAYHHRYGLPF-VGLRYMN 181
Query: 202 IYGPFGTWKGGREKAPAAFCRKALTSTDKFE---MWGDGLQTRSFTFIDECVEGVLRLTK 258
+YGP ++G A A K L + DK + ++GDG Q F ++++C + K
Sbjct: 182 VYGPRQDYRG----AYIAVIMKMLDALDKGQPMTLYGDGSQAYDFVYVEDCAAANICAMK 237
Query: 259 SD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLG 316
+D E N+G+ + S+ E+A+ + I +P G V+ R E++G
Sbjct: 238 ADTVDEYYNVGTGKRTSILELAKEIQKITGTSDNIQFLPQGTTFVKNRIGCPKKAAEQIG 297
Query: 317 WAPSMKLKDGLRITYFWIKEQI-EKEKTQGIDLS 349
+ + L +GL+ W + I E E+ + + +S
Sbjct: 298 FKAEVGLTEGLQRLIEWRRSHIAEVEQRREVAIS 331
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 220 (82.5 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 88/309 (28%), Positives = 133/309 (43%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDL--RVMDNC-LKV 87
VTG GFI SH+ L G + D K H H + DL + D C L
Sbjct: 8 VTGGAGFIGSHMVDLLLDCGFQVRVIDNLKGGHRRN--LEHRANNPDLTFEIKDICELSA 65
Query: 88 T----KGVDHVFNLAADMGGMG-FIQSNHSVIMY--NNTMISFNMLEASRISGVKRFFYA 140
+ VD+VF+ A G+G + S + I Y N M + +LE +R + VK+ YA
Sbjct: 66 PHPLFENVDYVFHFA----GIGDIVPSIENPIDYLQTNVMGTVRVLECARAANVKKLVYA 121
Query: 141 SSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFH 200
+S+ Y +V +E P PQ Y L K EE H+ + +G+ R
Sbjct: 122 ASSSCYGL-----ADVPTREDH--PIAPQYPYALSKYLGEEAAFHWFQVYGLPVNSIRIF 174
Query: 201 NIYGPFGTWKGGREKAPAAFCRKALTSTDK-FEMWGDGLQTRSFTFIDECVEGVLRLTKS 259
N YG G F ++ L DK F + GDG Q R F ++ + L+ ++
Sbjct: 175 NAYGTRVRTTGVYGAVFGVFFKQKLA--DKPFTVVGDGTQRRDFLYVTDVARAFLKAAET 232
Query: 260 -DFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWA 318
E N+G+ S+N + E++ E + +P PG +D + IK LGW
Sbjct: 233 RKVGETWNLGAGNPQSINRLVELI-GGEVEYIPKR--PGEPDCTW--ADISKIKRDLGWE 287
Query: 319 PSMKLKDGL 327
P++ DG+
Sbjct: 288 PTITFADGV 296
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 216 (81.1 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 87/326 (26%), Positives = 145/326 (44%)
Query: 29 ISVTGAGGFIASHIARRL-KSEGHYIIAS----DWKKN-EHMTEDMFCHEFHLV--DLRV 80
I +TGA GFIASH+A RL +S Y I D+ N +++ F V D+
Sbjct: 9 ILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFVKGDIAS 68
Query: 81 MD--NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRF 137
D N L +T+G+D + + AA N NN + +LEA +++G ++RF
Sbjct: 69 ADLVNHLLITEGIDTIMHFAAQTHVDNSF-GNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
Query: 138 FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
+ S+ +Y E + + + +A P + Y K +E L Y + +G+
Sbjct: 128 IHVSTDEVYGE---TDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
Query: 198 RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV-LRL 256
R +N+YGP EK F A+ + GDG RS+ + ++ E + L
Sbjct: 185 RGNNVYGP----NQFPEKLIPKFILLAMRG-QVLPIHGDGSNVRSYLYCEDVAEAFEVVL 239
Query: 257 TKSDFREPVNIGSDEMVSMNEMA-EIVLSFE-DKKLPIHHIPG-PEGVRGRNSDNTLIKE 313
K + NIG+ + +N++A +I F D + I + P + D+ +K
Sbjct: 240 HKGEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLK- 298
Query: 314 KLGWAPSMKLKDGLRITYFWIKEQIE 339
KLGW+ ++GL+ T W + E
Sbjct: 299 KLGWSERTTWEEGLKKTMDWYTQNPE 324
>TAIR|locus:2050921 [details] [associations]
symbol:GAE4 "UDP-D-glucuronate 4-epimerase 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC002387 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376 EMBL:AY594693
EMBL:BT005652 EMBL:BT004225 IPI:IPI00535089 PIR:A84889
RefSeq:NP_182056.1 UniGene:At.66419 ProteinModelPortal:O22141
SMR:O22141 STRING:O22141 PaxDb:O22141 PRIDE:O22141
EnsemblPlants:AT2G45310.1 GeneID:819139 KEGG:ath:AT2G45310
TAIR:At2g45310 InParanoid:O22141 OMA:IFESANH PhylomeDB:O22141
BioCyc:MetaCyc:AT2G45310-MONOMER Genevestigator:O22141
Uniprot:O22141
Length = 437
Score = 212 (79.7 bits), Expect = 9.8e-15, P = 9.8e-15
Identities = 89/339 (26%), Positives = 151/339 (44%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIA----SDW------KKNEHMTE--DMFCHEFH 74
+ + VTGA GF+ +H++ LK G +I +D+ + + E +F E
Sbjct: 97 ITVLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYYDPSLKRARRALLERSGIFIVEGD 156
Query: 75 LVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASR-ISG 133
+ D+ ++ K+ HV +LAA G+ + N S +++N N+LE + ++
Sbjct: 157 INDVELLRKLFKIVS-FTHVMHLAAQ-AGVRYAMENPSSYVHSNIAGFVNLLEICKSVNP 214
Query: 134 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
+ASS+ +Y L T V E D +P Y K A EE+ Y +G+
Sbjct: 215 QPAIVWASSSSVYG----LNTKVPFSEKDKTD-QPASLYAATKKAGEEIAHTYNHIYGLS 269
Query: 194 CRVGRFHNIYGPFGTWKGGREKAPAAFCRKALT--STDKFEMWGDGLQTRSFTFIDECVE 251
RF +YGP W G + A F + L S FE G R FT+ID+ V+
Sbjct: 270 LTGLRFFTVYGP---W-GRPDMAYFFFTKDILKGKSISIFESANHGTVARDFTYIDDIVK 325
Query: 252 GVL-------RLTKSDFRE--PV-----NIGSDEMVSMNEMAEIV---LSFEDKKLPIHH 294
G L + T S ++ P N+G+ V ++++ I+ L + KK I
Sbjct: 326 GCLAALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVRILERQLKVKAKKNLIK- 384
Query: 295 IPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 333
+P V +++ +L + +LG+ P+ L+ GL+ W
Sbjct: 385 MPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 423
>TIGR_CMR|CJE_1612 [details] [associations]
symbol:CJE_1612 "GDP-L-fucose synthetase" species:195099
"Campylobacter jejuni RM1221" [GO:0009242 "colanic acid
biosynthetic process" evidence=ISS] [GO:0050577 "GDP-L-fucose
synthase activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577 OMA:IHCAGRV
GO:GO:0042350 RefSeq:YP_179593.1 ProteinModelPortal:Q5HSZ2
STRING:Q5HSZ2 GeneID:3232240 KEGG:cjr:CJE1612 PATRIC:20045021
BioCyc:CJEJ195099:GJC0-1642-MONOMER Uniprot:Q5HSZ2
Length = 349
Score = 142 (55.0 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 48/181 (26%), Positives = 81/181 (44%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
+I + G G + S I R+LK G+ + +K + E L D + +
Sbjct: 6 KIYIAGHRGLVGSAILRKLKDNGYENLI--YKTHS---------ELDLTDQSAVKFFFEK 54
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147
K D VF AA +GGM + + +Y+N I N++ S I+ VK+ + SS +YP
Sbjct: 55 EKP-DFVFLCAAKLGGMDAHRKFRAEFIYDNLQIQNNVIHQSYINNVKKLLFISSTSVYP 113
Query: 148 EFKQLETNVSLKESDAWPAEPQ---DAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG 204
E L +KE + Q + Y + K+A ++C+ Y+ +G+ +YG
Sbjct: 114 EHASLP----IKEECLLSGKLQYLHEPYAIAKIAGMKMCEAYSDRYGVNFISVCPTTLYG 169
Query: 205 P 205
P
Sbjct: 170 P 170
Score = 113 (44.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 33/120 (27%), Positives = 59/120 (49%)
Query: 229 DKFEMWGDGLQTRSFTFIDE----CVE-----GVLRLTKSDFREP-VNIGSDEMVSMNEM 278
+ E+WG G R F + D+ C+ + + K D P +NIG ++ S+ E+
Sbjct: 227 NSIEIWGSGNPKREFLYSDDLANACIHIMQNINIEHINKIDRDNPHINIGPEKNYSIKEL 286
Query: 279 AEI---VLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIK 335
A + V+ FE + +++ P+G + + IK+ + W KL+DG+R T+ W K
Sbjct: 287 AYLLKTVIQFEGEFR--YNLSKPDGTYEKLTCCDKIKQ-MNWQAYTKLEDGIRSTFHWYK 343
>TIGR_CMR|CBU_0688 [details] [associations]
symbol:CBU_0688 "GDP-fucose synthetase" species:227377
"Coxiella burnetii RSA 493" [GO:0009242 "colanic acid biosynthetic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GenomeReviews:AE016828_GR
GO:GO:0044237 HOGENOM:HOG000168011 HSSP:P32055 EMBL:AF387640
ProteinModelPortal:Q93N55 PATRIC:17930059 ProtClustDB:CLSK914241
BioCyc:CBUR227377:GJ7S-686-MONOMER Uniprot:Q93N55
Length = 332
Score = 205 (77.2 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 92/342 (26%), Positives = 151/342 (44%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT 88
I VTG G S I RRLK +G+ + + + +T EF +NC
Sbjct: 7 IFVTGHRGLAGSAILRRLKKQGYSSLITRTHQELDLTNKEKVFEFFA------NNC---- 56
Query: 89 KGVDHVFNLAADMGGMGFIQSN-HSV-IMYNNTMISFNMLEASRISGVKRFFYASSACIY 146
++VF AA +GG+ SN H V + +N I +N++EAS VKR + S+CIY
Sbjct: 57 --PEYVFLAAARVGGIN--DSNLHPVDFIRDNLAIQWNVIEASFRYKVKRLLFLGSSCIY 112
Query: 147 PEFKQLETNVSLKES--DAWPAEPQD-AYGLEKLASEELCKHYTKDFGIECRVGRFHNIY 203
+ LKE ++ EP + AY K+A E C Y + + + N++
Sbjct: 113 SN----DAPRPLKEIYFNSGKLEPTNRAYSTAKIAGIEHCWAYNRQYKTQYLCAMPTNLF 168
Query: 204 GPFGTWKGGREKAPAAFCRKALTSTDK----FEMWGDGLQTRSFTFIDECVEGVLRL--- 256
GP + A+ K + ++ F +WG G R F + D+ E L
Sbjct: 169 GPNDNYDLENGHVVASLISKIHQAKEQKKPNFVLWGSGKAKREFLYSDDLAEACCHLMNL 228
Query: 257 ----TKSDFRE---P--VNIGSDEMVSMNEMAEIVLSFEDKKLPI-HHIPGPEGVRGRNS 306
KS F + P VNIGS + +S+ E+A ++ + I P+G +
Sbjct: 229 PDDIVKSVFGQDDQPPIVNIGSGKEISIYELALLIQDIIGYQGDIIWDHSKPDGALTKVM 288
Query: 307 DNTLIKEKLGWAPSMKLKDGLRITY-FWIKEQIEKEKTQGID 347
D +L+ + LGW+ L G++ TY +++ + + +GI+
Sbjct: 289 DVSLM-QYLGWSAREGLVSGIKKTYQYYLSYERQAIAIEGIE 329
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 212 (79.7 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 88/326 (26%), Positives = 142/326 (43%)
Query: 29 ISVTGAGGFIASHIARRL-KSEGHYIIAS----DWKKN-EHMTEDMFCHEFHLV--DLRV 80
I +TGA GFIASH+A RL +S Y I D+ N +++ F V D+
Sbjct: 9 ILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIAS 68
Query: 81 MD--NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRF 137
D N L +T+ +D + + AA N NN + +LEA +++G ++RF
Sbjct: 69 ADLVNYLLITEEIDTIMHFAAQTHVDNSF-GNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
Query: 138 FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
+ S+ +Y E + + S+ +A P + Y K +E L Y + +G+
Sbjct: 128 IHVSTDEVYGE---TDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
Query: 198 RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV-LRL 256
R +N+YGP EK F A+ + GDG RS+ + ++ E + L
Sbjct: 185 RGNNVYGP----NQFPEKLIPKFILLAMNGKP-LPIHGDGSNVRSYLYCEDVAEAFEVVL 239
Query: 257 TKSDFREPVNIGSDEMVSMNEMA-EIVLSFE-DKKLPIHHIPG-PEGVRGRNSDNTLIKE 313
K + NIG+ + ++A +I F D I ++ P + D+ +K
Sbjct: 240 HKGEVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLK- 298
Query: 314 KLGWAPSMKLKDGLRITYFWIKEQIE 339
KLGW ++GLR T W E E
Sbjct: 299 KLGWCERTNWEEGLRKTMEWYTENPE 324
>UNIPROTKB|Q489C2 [details] [associations]
symbol:CPS_0592 "Capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 192 (72.6 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 68/242 (28%), Positives = 108/242 (44%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH----MTEDMFC---H-EFHLVDL 78
++ VTGA GFI S + RL + GH ++ D N++ + + H F + +
Sbjct: 1 MKYLVTGAAGFIGSAVVERLCAAGHDVVGID-NINDYYDIALKQARLARIEHASFSFIKM 59
Query: 79 RVMD-NCLK---VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV 134
+ D N + + D V +LAA G+ + N +N + N+LE R + V
Sbjct: 60 DIADRNVMAELFTAQQFDKVVHLAAQ-AGVRYSIENPMAYADSNLIGHLNVLEGCRNNQV 118
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
K YASS+ +Y L V D P Y K ++E + Y+ + I
Sbjct: 119 KHLIYASSSSVYG----LNNKVPFSTKDTVD-HPVSLYAATKKSNELMAHSYSHLYNIPT 173
Query: 195 RVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVL 254
RF +YG +W G + AP F +K L D ++ +G R FT +D+ VEGV+
Sbjct: 174 TGLRFFTVYG---SW-GRPDMAPYIFTKKILNG-DTIDINNNGDMWRDFTHVDDIVEGVI 228
Query: 255 RL 256
R+
Sbjct: 229 RI 230
Score = 47 (21.6 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 17/74 (22%), Positives = 31/74 (41%)
Query: 266 NIGSDEMVSMNEMAEIV---LSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMK 322
NIG +S+ + + + L E KK PG V +D + + + P +
Sbjct: 259 NIGHGSPISLMDFVKAIEDELGIEAKKNFREMQPGD--VYQTYADTQDLFKATNYVPKIS 316
Query: 323 LKDGLRITYFWIKE 336
+K+G+ W K+
Sbjct: 317 VKEGVAELVVWFKD 330
>TIGR_CMR|CPS_0592 [details] [associations]
symbol:CPS_0592 "capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 192 (72.6 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 68/242 (28%), Positives = 108/242 (44%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH----MTEDMFC---H-EFHLVDL 78
++ VTGA GFI S + RL + GH ++ D N++ + + H F + +
Sbjct: 1 MKYLVTGAAGFIGSAVVERLCAAGHDVVGID-NINDYYDIALKQARLARIEHASFSFIKM 59
Query: 79 RVMD-NCLK---VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV 134
+ D N + + D V +LAA G+ + N +N + N+LE R + V
Sbjct: 60 DIADRNVMAELFTAQQFDKVVHLAAQ-AGVRYSIENPMAYADSNLIGHLNVLEGCRNNQV 118
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
K YASS+ +Y L V D P Y K ++E + Y+ + I
Sbjct: 119 KHLIYASSSSVYG----LNNKVPFSTKDTVD-HPVSLYAATKKSNELMAHSYSHLYNIPT 173
Query: 195 RVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVL 254
RF +YG +W G + AP F +K L D ++ +G R FT +D+ VEGV+
Sbjct: 174 TGLRFFTVYG---SW-GRPDMAPYIFTKKILNG-DTIDINNNGDMWRDFTHVDDIVEGVI 228
Query: 255 RL 256
R+
Sbjct: 229 RI 230
Score = 47 (21.6 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 17/74 (22%), Positives = 31/74 (41%)
Query: 266 NIGSDEMVSMNEMAEIV---LSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMK 322
NIG +S+ + + + L E KK PG V +D + + + P +
Sbjct: 259 NIGHGSPISLMDFVKAIEDELGIEAKKNFREMQPGD--VYQTYADTQDLFKATNYVPKIS 316
Query: 323 LKDGLRITYFWIKE 336
+K+G+ W K+
Sbjct: 317 VKEGVAELVVWFKD 330
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 201 (75.8 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 76/254 (29%), Positives = 117/254 (46%)
Query: 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM----------FCH-EFH 74
K+R VTG GFI H+ +RL + G +I+ D N++ ++ F H FH
Sbjct: 5 KMRTLVTGCAGFIGFHLTKRLLARGDHILGLD-NLNDYYDVNLKEARLAQLKEFPHFSFH 63
Query: 75 LVDLRVMDNCLKVTKG--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISF-NMLEASRI 131
+DL + + D V +LAA G+ + +N + +N ++ F ++LE R
Sbjct: 64 KLDLADRQGMTDLFQKHLFDTVVHLAAQ-AGVRYSLTNPYAYVDSN-LVGFAHILEGCRH 121
Query: 132 SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFG 191
VK +ASS+ +Y ++ ESD P Y K A+E + Y F
Sbjct: 122 QSVKHLVFASSSSVYGANEKYP----FSESDNVD-HPIALYAASKKANELMAHSYAHLFQ 176
Query: 192 IECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDK-FEMWGDGLQTRSFTFIDECV 250
+ C RF +YGP W G + A F R L DK +++ G +R FT+ID+ V
Sbjct: 177 LPCTGLRFFTVYGP---W-GRPDMALFKFTRNLLA--DKPIDVYNHGKMSRDFTYIDDIV 230
Query: 251 EGVLRLTKSDFREP 264
+G+L LT EP
Sbjct: 231 DGIL-LTLDHPPEP 243
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 197 (74.4 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 92/346 (26%), Positives = 153/346 (44%)
Query: 19 EPYWPSEKL--RISVTGAGGFIASHIARRLKSE-GHYIIAS----DW---KKNEHMTEDM 68
EP P R+ VTG GFIASH+ L + +Y+I + D+ KN D
Sbjct: 8 EPLGPPNSFAKRVLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLDYCASLKNLETISDK 67
Query: 69 FCHEFHLVDLRVMDNCLKV---TKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFN 124
++F D+ + +K+ T+ +D V + AA + F+++ Y N +
Sbjct: 68 QNYKFIQGDI-CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFE--FTYVNVYGTHV 124
Query: 125 MLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184
+L A+ + V++F Y S+ +Y E + ES P +P + Y K A+E +
Sbjct: 125 LLSAAHEARVEKFIYVSTDEVYGGSLDKEFD----ESS--PKQPTNPYASSKAAAECFVQ 178
Query: 185 HYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 244
Y + + + R N+YGP EK F L K + G GLQTR+F
Sbjct: 179 SYWERYKFPVVITRSSNVYGPHQY----PEKVIPKFI-SLLQHNRKCCIHGSGLQTRNFL 233
Query: 245 FIDECVEGVLR-LTKSDFREPVNIGSDEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEGVR 302
+ + VE L L K E NIG++ +S+ ++A E++ ++ K + V
Sbjct: 234 YATDVVEAFLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETKSESEMENWVDYVN 293
Query: 303 GRNSDNT---LIKEK---LGWAPSMKLKDGLRITYFWIKEQIEKEK 342
R +++ + EK LGW P + K+G++ T W +E K
Sbjct: 294 DRPTNDMRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYRENFHNWK 339
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 196 (74.1 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 84/353 (23%), Positives = 152/353 (43%)
Query: 24 SEKLRISVTGAGGFIAS---HIARRLKSEGHYIIASD--WKKNEHMTEDMFCHEFHLVDL 78
+E I VTG GFI S H + H + + N E++ LV
Sbjct: 2 TEYKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANLEEILGDRVELVVG 61
Query: 79 RVMDNCL--KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKR 136
+ D+ L K+ D + + AA+ ++ + S +Y N + ++ +LEA+R + R
Sbjct: 62 DIADSELVDKLAAKADAIVHYAAESHNDNSLK-DPSPFIYTNFVGTYILLEAARKYDI-R 119
Query: 137 FFYASSACIYPEFKQLETNVSLKES--DAWPAE----PQDAYGLEKLASEELCKHYTKDF 190
F + S+ +Y + E E + + AE P Y K AS+ + K + + F
Sbjct: 120 FHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSF 179
Query: 191 GIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 250
G++ + N YGP+ + + P + S K +++G+G R + ++
Sbjct: 180 GVKATISNCSNNYGPY---QHIEKFIPRQITN--ILSGIKPKLYGEGKNVRDWIHTNDHS 234
Query: 251 EGVLR-LTKSDFREPVNIGSDEMVSMNEMAEIVLS-FEDKKLPIHHIPGPEGVRGRNS-D 307
GV LTK E IG+D + E+ E++L K H+ G R + D
Sbjct: 235 TGVWAILTKGRIGETYLIGADGEKNNKEVLELILEKMSQPKNAYDHVTDRAGHDLRYAID 294
Query: 308 NTLIKEKLGWAPSM-KLKDGLRITYFWIKEQIE--KEKTQGIDLSVYGSSKVV 357
+T ++E+LGW P ++GL T W E + K + + ++ + + K++
Sbjct: 295 STKLREELGWKPQFTNFEEGLEDTIKWYTEHEDWWKAEKEAVEANYAKTQKIL 347
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 201 (75.8 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 85/326 (26%), Positives = 143/326 (43%)
Query: 29 ISVTGAGGFIASHIARRL-KSEGHYIIAS----DWKKNEHMTEDMFCH-EFHLV--DLRV 80
I +TGA GFIASH+A RL ++ Y I D+ + + F F V D+
Sbjct: 11 ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKFVKGDIAS 70
Query: 81 MD--NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRF 137
D N L +T+ +D + + AA N NN + +LEA +++G ++RF
Sbjct: 71 DDLVNYLLITENIDTIMHFAAQTHVDNSF-GNSFEFTKNNIYGTHVLLEACKVTGQIRRF 129
Query: 138 FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
+ S+ +Y E + + ++ +A P + Y K +E L Y + +G+
Sbjct: 130 IHVSTDEVYGE---TDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 186
Query: 198 RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV-LRL 256
R +N+YGP EK F A+ S + GDG RS+ + ++ E + L
Sbjct: 187 RGNNVYGP----NQFPEKMIPKFILLAM-SGKPLPIHGDGSNVRSYLYCEDVAEAFEVVL 241
Query: 257 TKSDFREPVNIGSDEMVSMNEMA-EIVLSF-EDKKLPIHHIPG-PEGVRGRNSDNTLIKE 313
K + N+G+ + ++A +I F +D + I + P + D+ +K
Sbjct: 242 HKGEIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLK- 300
Query: 314 KLGWAPSMKLKDGLRITYFWIKEQIE 339
KLGW +DGL+ T W + E
Sbjct: 301 KLGWQERTNWEDGLKKTMDWYTQNPE 326
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 191 (72.3 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 83/307 (27%), Positives = 137/307 (44%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKK---NEHMTEDMFCH-----EFHLVDL 78
++I VTGA GFI S +A RL EGH + D + + ED +F L +
Sbjct: 1 MKILVTGAAGFIGSEMALRLLKEGHSVTGVDCFTPYYDPQLKEDRAARLTAFDDFRLERI 60
Query: 79 RVMDN-CLKVTKGVDH---VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV 134
R+ D+ ++ D V + AA G+ + + + N + SFN+++ SR G
Sbjct: 61 RIEDSEAMEAVFQRDTPEMVLHFAAQ-AGVRYSLDHPRDFIDANIVGSFNIIDLSRRHGT 119
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
+ AS++ Y ++ +E D+ P P Y KLASE + + +G+
Sbjct: 120 QHLVMASTSSAYGANQKFP----FEERDSAPY-PLTIYAATKLASELIAHSHAHLYGVPT 174
Query: 195 RVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVL 254
V RF ++YGP W G + A F K +++ G R FT+ID+ VE +
Sbjct: 175 TVLRFFSVYGP---W-GRPDMAFFLFTDKIFKG-QPIDVFNHGDLLRDFTYIDDLVEAIR 229
Query: 255 RLTKSDFREPVNIGSDEMV--SMNEMAEIVLSFEDKKLPIH---HIPGPEGVRGRNSDNT 309
RL + PV +G+ + S++ +A L P+ +I EG GR ++
Sbjct: 230 RLMDTP---PV-VGNHIIRGDSLSPVAPYRLVNIGNASPVRLMDYIEAIEGAIGRKAEKN 285
Query: 310 LIKEKLG 316
+I + G
Sbjct: 286 MIDMQPG 292
>TAIR|locus:2126846 [details] [associations]
symbol:GAE3 "UDP-D-glucuronate 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0016020 "membrane" evidence=TAS] [GO:0050378
"UDP-glucuronate 4-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
GO:GO:0032580 GO:GO:0044237 EMBL:AL161471 EMBL:AF069299
HOGENOM:HOG000168000 KO:K08679 ProtClustDB:CLSN2679288
GO:GO:0050378 EMBL:BT026487 IPI:IPI00527699 PIR:T01339
RefSeq:NP_191922.1 UniGene:At.27610 HSSP:Q14376
ProteinModelPortal:O81312 SMR:O81312 STRING:O81312 PaxDb:O81312
PRIDE:O81312 EnsemblPlants:AT4G00110.1 GeneID:828145
KEGG:ath:AT4G00110 TAIR:At4g00110 InParanoid:O81312 OMA:KWWSRVL
PhylomeDB:O81312 Genevestigator:O81312 Uniprot:O81312
Length = 430
Score = 194 (73.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 85/337 (25%), Positives = 148/337 (43%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIA----SDW------KKNEHMTE--DMFCHEFHLV 76
+ VTGA GF+ +H++ LK G ++ +D+ + + + E +F E +
Sbjct: 93 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDIN 152
Query: 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK- 135
D ++ +V HV +LAA G+ + N S +++N N+LE + + +
Sbjct: 153 DAALLKKLFEVVP-FTHVMHLAAQ-AGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQP 210
Query: 136 RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
+ASS+ +Y L T V E D +P Y K A EE+ Y +G+
Sbjct: 211 AIVWASSSSVYG----LNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGLSLT 265
Query: 196 VGRFHNIYGPFGTWKGGREKAPAAFCRKALT--STDKFEMWGDGLQTRSFTFIDECVEGV 253
RF +YGP W G + A F R L + FE G R FT+ID+ V+G
Sbjct: 266 GLRFFTVYGP---W-GRPDMAYFFFTRDILKGKAISIFEGVNHGTVARDFTYIDDIVKGC 321
Query: 254 L-------RLTKSDFREP-------VNIGSDEMVSMNEMAEIV---LSFEDKKLPIHHIP 296
L + T S ++ N+G+ V + ++ I+ L + K+ I +P
Sbjct: 322 LGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVTILERLLKVKAKR-NIMKLP 380
Query: 297 GPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 333
V+ +++ + + +LG+ P+ L+ GL+ W
Sbjct: 381 RNGDVQFTHANISSAQRELGYKPTTDLQTGLKKFARW 417
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 190 (71.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 68/242 (28%), Positives = 105/242 (43%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHE---------FHLVDLR 79
I VTGA GFI H+ +RL G ++ D N++ ++ F V
Sbjct: 4 ILVTGAAGFIGFHLTKRLLDRGDRVVGLD-NLNDYYDVNLKLDRLRQLEGREGFSFVRTS 62
Query: 80 VMDNC----LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISF-NMLEASRISGV 134
+ D L + D V NLAA G I + H+ + ++ ++ F N+LE R GV
Sbjct: 63 LADRPALEDLFAGQRFDVVVNLAAQAGVRYSITNPHAYV--DSNLVGFINILEGCRHHGV 120
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
K YASS+ +Y + ++ D P Y K A+E + Y+ +G+
Sbjct: 121 KHLVYASSSSVYGANTAMPFSIH-HNVD----HPVSLYAATKKANELMAHTYSSLYGLPT 175
Query: 195 RVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVL 254
RF +YGP W GR KA+ +++ G R FT++D+ VEGV
Sbjct: 176 TGLRFFTVYGP---W--GRPDMALFLFTKAILEGRPIDVYNFGKMQRDFTYVDDIVEGVT 230
Query: 255 RL 256
R+
Sbjct: 231 RV 232
>TAIR|locus:2139134 [details] [associations]
symbol:GAE5 "UDP-D-glucuronate 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0042631 "cellular response to water
deprivation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376
EMBL:AY050993 EMBL:AY150403 IPI:IPI00529597 PIR:T48135
RefSeq:NP_192962.1 UniGene:At.48849 UniGene:At.66589
ProteinModelPortal:Q9STI6 SMR:Q9STI6 STRING:Q9STI6 PRIDE:Q9STI6
EnsemblPlants:AT4G12250.1 GeneID:826833 KEGG:ath:AT4G12250
TAIR:At4g12250 InParanoid:Q9STI6 OMA:RAYRQQM PhylomeDB:Q9STI6
Genevestigator:Q9STI6 Uniprot:Q9STI6
Length = 436
Score = 193 (73.0 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 94/361 (26%), Positives = 158/361 (43%)
Query: 8 YGAYTYEELEREPYWPSEK--LRISVTGAGGFIASHIARRLKSEGHYIIASD-------- 57
YG +E+ R+ P L + VTGA GF+ +H++ L+ G ++ D
Sbjct: 75 YGGSHWEKQVRKSARPRSHGGLTVLVTGASGFVGTHVSIALRRRGDGVLGLDNFNRYYDP 134
Query: 58 -WKK-NEHMTE--DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSV 113
K+ + + E +F E + D ++ V HV +LAA G +Q+ S
Sbjct: 135 KLKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVL-FTHVMHLAAQAGVRYAMQNPGSY 193
Query: 114 IMYNNTMISF-NMLEASRISGVK-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA 171
+ N+ + F N+LE S+ + + +ASS+ +Y L + V E D +P
Sbjct: 194 V--NSNIAGFVNLLEVSKSANPQPAIVWASSSSVYG----LNSKVPFSEKDRTD-QPASL 246
Query: 172 YGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALT--STD 229
Y K A E + Y +G+ RF +YGP W G + A F + L +
Sbjct: 247 YAATKKAGEGIAHTYNHIYGLSLTGLRFFTVYGP---W-GRPDMAYFFFTKDILKGKTIT 302
Query: 230 KFEMWGDGLQTRSFTFIDECVEGVL-------RLTKSDFRE--PV-----NIGSDEMVSM 275
FE G R FT+ID+ V+G L + T S ++ P N+G+ V +
Sbjct: 303 VFESPDKGSVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPVPV 362
Query: 276 NEMAEIV---LSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYF 332
++ I+ L + KK I +P V +++ TL + +LG+ P++ L+ GL+
Sbjct: 363 TKLVTILEKLLKMKAKK-KIMPLPRNGDVEFTHANITLAQAELGYKPAVDLETGLKKFVK 421
Query: 333 W 333
W
Sbjct: 422 W 422
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 178 (67.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 68/251 (27%), Positives = 111/251 (44%)
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145
+V G D V +LAA+ + + SV + N + +L+A+ GV F S+ +
Sbjct: 71 RVMAGQDQVVHLAAE-SHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVASFVQVSTDEV 129
Query: 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
Y LE S E + P P Y K + + L + G++ RV R N YGP
Sbjct: 130 YGS---LEHG-SWTEDE--PLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSNNYGP 183
Query: 206 FGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL-TKSDFREP 264
+ EK F L + ++GDGL R + +D+ V G+ + T+
Sbjct: 184 ----RQFPEKLIPRFIT-LLMDGHRVPLYGDGLNVREWLHVDDHVRGIEAVRTRGRAGRV 238
Query: 265 VNIGSDEMVSMNEMAEIVLSFEDKKL-PIHHIPGPEGVRGRNS-DNTLIKEKLGWAPSMK 322
NIG +S E+ ++L + ++ +G R + D+T I+ +LG+AP++
Sbjct: 239 YNIGGGATLSNKELVGLLLEAAGADWGSVEYVEDRKGHDRRYAVDSTRIQRELGFAPAVD 298
Query: 323 LKDGLRITYFW 333
L DGL T W
Sbjct: 299 LADGLAATVAW 309
Score = 49 (22.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 31 VTGAGGFIASHIARRLKSEG 50
VTGA GFI S R L G
Sbjct: 7 VTGAAGFIGSQYVRTLLGPG 26
>UNIPROTKB|Q47WH1 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase family
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 EMBL:CP000083
GenomeReviews:CP000083_GR HOGENOM:HOG000168011 KO:K02377
OMA:ASVHVMN RefSeq:YP_270851.1 ProteinModelPortal:Q47WH1
STRING:Q47WH1 GeneID:3522019 KEGG:cps:CPS_4200 PATRIC:21471263
ProtClustDB:CLSK2768411 BioCyc:CPSY167879:GI48-4210-MONOMER
Uniprot:Q47WH1
Length = 313
Score = 188 (71.2 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 82/329 (24%), Positives = 146/329 (44%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
++I +TGA G + +I +AS K++H +L+D L
Sbjct: 1 MKILLTGANGMVGKNILE---------LAS---KHQHTFLTPSSKVLNLLDAASTQAYL- 47
Query: 87 VTKGVDHVFNLAADMGGMGFIQSN--HSV-IMYNNTMISFNMLEASRISGVKRFFYASSA 143
V D + + A +GG IQ+N H V + +N + N+L +++ G+K+F SS+
Sbjct: 48 VEHKPDMIIHAAGVVGG---IQANMAHPVKFLVDNMQMGLNILNSAKNCGIKQFLNLSSS 104
Query: 144 CIYPE--FKQLETNVSLKESDAWPAEP-QDAYGLEKLASEELCKHYT-KDFGIECRVGRF 199
C+YP L + LK EP + Y L K+AS LC++ + ++ + +
Sbjct: 105 CMYPRDALNPLSEELILKGE----LEPTNEGYALAKIASTRLCEYISHEEPELLYKTIIP 160
Query: 200 HNIYGPFGTWKGGREKAPAAFCRKALTSTDK----FEMWGDGLQTRSFTFIDECVEGVLR 255
N+YG + A RK + + K ++WGDG R F + + + +
Sbjct: 161 CNLYGRHDKFSPHNSHMIPAVIRKVIDAKQKDLTEIDIWGDGKARREFMYAGDLADFIFY 220
Query: 256 LTKSDFREP--VNIGSDEMVSMNE----MAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNT 309
+ R P +N+G E ++N+ +AEI+ F H + P G++ + D+
Sbjct: 221 AIANFSRMPQNLNVGLGEDFTINDYYQRIAEII-GFSGTFK--HDLTKPVGMKQKLIDDN 277
Query: 310 LIKEKLGWAPSMKLKDGLRITY-FWIKEQ 337
+ GW+ L +GL+ T F++ EQ
Sbjct: 278 KLNA-FGWSYKTDLTEGLKNTVQFFLSEQ 305
>TIGR_CMR|CPS_4200 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase
family protein" species:167879 "Colwellia psychrerythraea 34H"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:CP000083 GenomeReviews:CP000083_GR
HOGENOM:HOG000168011 KO:K02377 OMA:ASVHVMN RefSeq:YP_270851.1
ProteinModelPortal:Q47WH1 STRING:Q47WH1 GeneID:3522019
KEGG:cps:CPS_4200 PATRIC:21471263 ProtClustDB:CLSK2768411
BioCyc:CPSY167879:GI48-4210-MONOMER Uniprot:Q47WH1
Length = 313
Score = 188 (71.2 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 82/329 (24%), Positives = 146/329 (44%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
++I +TGA G + +I +AS K++H +L+D L
Sbjct: 1 MKILLTGANGMVGKNILE---------LAS---KHQHTFLTPSSKVLNLLDAASTQAYL- 47
Query: 87 VTKGVDHVFNLAADMGGMGFIQSN--HSV-IMYNNTMISFNMLEASRISGVKRFFYASSA 143
V D + + A +GG IQ+N H V + +N + N+L +++ G+K+F SS+
Sbjct: 48 VEHKPDMIIHAAGVVGG---IQANMAHPVKFLVDNMQMGLNILNSAKNCGIKQFLNLSSS 104
Query: 144 CIYPE--FKQLETNVSLKESDAWPAEP-QDAYGLEKLASEELCKHYT-KDFGIECRVGRF 199
C+YP L + LK EP + Y L K+AS LC++ + ++ + +
Sbjct: 105 CMYPRDALNPLSEELILKGE----LEPTNEGYALAKIASTRLCEYISHEEPELLYKTIIP 160
Query: 200 HNIYGPFGTWKGGREKAPAAFCRKALTSTDK----FEMWGDGLQTRSFTFIDECVEGVLR 255
N+YG + A RK + + K ++WGDG R F + + + +
Sbjct: 161 CNLYGRHDKFSPHNSHMIPAVIRKVIDAKQKDLTEIDIWGDGKARREFMYAGDLADFIFY 220
Query: 256 LTKSDFREP--VNIGSDEMVSMNE----MAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNT 309
+ R P +N+G E ++N+ +AEI+ F H + P G++ + D+
Sbjct: 221 AIANFSRMPQNLNVGLGEDFTINDYYQRIAEII-GFSGTFK--HDLTKPVGMKQKLIDDN 277
Query: 310 LIKEKLGWAPSMKLKDGLRITY-FWIKEQ 337
+ GW+ L +GL+ T F++ EQ
Sbjct: 278 KLNA-FGWSYKTDLTEGLKNTVQFFLSEQ 305
>TAIR|locus:2025472 [details] [associations]
symbol:GAE2 "UDP-D-glucuronate 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC020622 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AF334734 EMBL:AY084754
EMBL:AK228396 IPI:IPI00543208 PIR:A86152 RefSeq:NP_171702.1
UniGene:At.17005 ProteinModelPortal:Q9LPC1 SMR:Q9LPC1 STRING:Q9LPC1
PaxDb:Q9LPC1 PRIDE:Q9LPC1 EnsemblPlants:AT1G02000.1 GeneID:839289
KEGG:ath:AT1G02000 TAIR:At1g02000 InParanoid:Q9LPC1 OMA:LFKFVDA
PhylomeDB:Q9LPC1 Genevestigator:Q9LPC1 Uniprot:Q9LPC1
Length = 434
Score = 191 (72.3 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 84/337 (24%), Positives = 146/337 (43%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIA----SDW------KKNEHMTE--DMFCHEFHLV 76
+ VTGA GF+ +H++ LK G ++ +D+ + + + E +F E +
Sbjct: 94 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGDIN 153
Query: 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK- 135
DL ++ +V HV +LAA G+ + N +++N N+LE + + +
Sbjct: 154 DLSLLKKLFEVVP-FTHVMHLAAQ-AGVRYAMENPGSYVHSNIAGFVNLLEVCKSANPQP 211
Query: 136 RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
+ASS+ +Y L T V E D +P Y K A EE+ Y +G+
Sbjct: 212 AIVWASSSSVYG----LNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGLSLT 266
Query: 196 VGRFHNIYGPFGTWKGGREKAPAAFCRKALT--STDKFEMWGDGLQTRSFTFIDECVEGV 253
RF +YGP W G + A F R L + FE G R FT+ID+ V+G
Sbjct: 267 GLRFFTVYGP---W-GRPDMAYFFFTRDILKGKAISIFEGANHGTVARDFTYIDDIVKGC 322
Query: 254 L-------RLTKSDFREP-------VNIGSDEMVSMNEMAEIV---LSFEDKKLPIHHIP 296
L + T S ++ N+G+ V + ++ I+ L + K+ + +P
Sbjct: 323 LGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVSILERLLKVKAKR-NMMKLP 381
Query: 297 GPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 333
V +++ + + + G+ PS L+ GL+ W
Sbjct: 382 RNGDVPFTHANISSAQREFGYKPSTDLQTGLKKFVRW 418
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 190 (71.9 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 84/354 (23%), Positives = 141/354 (39%)
Query: 29 ISVTGAGGFIASHIARRLKSE---------GHYIIASDWKKNEHMTEDMFCHEFHLVDLR 79
+ +TG GFI S+ + I+ SD + + ++ L D++
Sbjct: 8 VVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKLILNSDTQNVAESVRNSPRYKLVLTDIK 67
Query: 80 VMDNCLKVTKG--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKR 136
L V + +D V + AAD + NN + LE R G +KR
Sbjct: 68 NEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQ-NNVLSFIQFLETVRTYGKIKR 126
Query: 137 FFYASSACIYPEFKQLETNVSLKE-SDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
F + S+ +Y + E E S P P Y K+A E + Y + +
Sbjct: 127 FVHISTDEVYGDSDLSENEQGKVEFSRLVPGNP---YAATKIAGEAYVRAYQTQYNLPIV 183
Query: 196 VGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 255
R +NIYGP W K F A + + + G G Q RS+ F+D+ G+
Sbjct: 184 TARMNNIYGP-NQWD---VKVVPRFIEIAKVRGE-YTIQGSGKQLRSWLFVDDASAGLKA 238
Query: 256 LT-KSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLP-IHHIPGPEGVRGR--NSDNTLI 311
+ K + E N+G+ ++ ++A+ + D +L H P + + R N LI
Sbjct: 239 VCEKGELHEIYNLGTYYEKNVADLAKTIQEEVDLQLGRAHEPPKYKSIPDRPYNDLRYLI 298
Query: 312 -----KEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVGTQ 360
K LGW P+ DG+R T + +++ K + +++YG VG +
Sbjct: 299 SIEKAKNDLGWEPTTSFDDGMRHT---VASALKEHKHVKMHVAIYGGKGYVGQE 349
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 175 (66.7 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 72/275 (26%), Positives = 128/275 (46%)
Query: 28 RISVTGAGGFIASHIA----RRLKSEGHYIIAS-DWKKNEH-----MTEDMF-CHEFHLV 76
+I +TG GFI SH+A ++ K+ ++ D+ N + + E F ++ +++
Sbjct: 11 KILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNIL 70
Query: 77 DLRVMDNCLKVTKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135
D +++N + K +D V +LAA F QS NN + + +LE + +K
Sbjct: 71 DSELLENIFEKEK-IDIVIHLAAYTHVDNSFKQSIK--FTENNILGTHYLLETCKNYKLK 127
Query: 136 RFFYASSACIYPEF---KQLETNVSLKESDAWPA--EPQDAYGLEKLASEELCKHYTKDF 190
+F Y S+ +Y + N S+ +S + P + Y K +E L + Y K F
Sbjct: 128 KFIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSF 187
Query: 191 GIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 250
+ + R +NIYGP K EK F L + K + G G TR++ +ID+ V
Sbjct: 188 KLPVIITRANNIYGP----KQYPEKIIPKFIN-LLLNNKKCTIHGTGKNTRNYLYIDDIV 242
Query: 251 EGV-LRLTKSDFREPVNIGSDEMVSMNEMAEIVLS 284
+ L K + NIG+D +S ++A+ +++
Sbjct: 243 SAFDIILRKGEIGNVYNIGTDFEISNLDVAKKIIN 277
Score = 53 (23.7 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 315 LGWAPSMKLKDGLRITYFWIK 335
LGW S+ ++G+ T+ W K
Sbjct: 343 LGWKKSISWEEGIEKTFIWYK 363
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 185 (70.2 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 89/346 (25%), Positives = 152/346 (43%)
Query: 19 EPYWPSEKL--RISVTGAGGFIASHIARRLKSE-GHYIIAS----DW---KKNEHMTEDM 68
EP P R+ VTG GFIASH+ L + +Y+I + D+ KN +
Sbjct: 8 EPLGPPSSFAKRLLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLETISNK 67
Query: 69 FCHEFHLVDLRVMDNCLKV---TKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFN 124
++F D+ + +K+ T+ +D V + AA + F+++ Y N +
Sbjct: 68 QNYKFIQGDI-CNSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFE--FTYVNVYGTHV 124
Query: 125 MLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184
++ A+ + V++F Y S+ +Y E + ES P +P + Y K A+E +
Sbjct: 125 LVSAAHEARVEKFIYVSTDEVYGGSLDKEFD----ESS--PKQPTNPYASSKAAAECFVQ 178
Query: 185 HYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 244
Y + + + R N+YGP EK F L K + G GLQTR+F
Sbjct: 179 SYWERYKFPAVITRSSNVYGPHQY----PEKVIPKFI-SLLQHNRKCCIHGSGLQTRNFL 233
Query: 245 FIDECVEGVLR-LTKSDFREPVNIGSDEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEGVR 302
+ + VE L L K E NIG++ +S+ ++A E++ ++ + V
Sbjct: 234 YATDVVEAFLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETSSESEMETWVDYVN 293
Query: 303 GRNSDNT---LIKEK---LGWAPSMKLKDGLRITYFWIKEQIEKEK 342
R +++ + EK LGW P + K+G++ T W +E K
Sbjct: 294 DRPTNDMRYPMKSEKIQGLGWRPKVPWKEGIKKTIDWYRENFHNWK 339
>TIGR_CMR|BA_5505 [details] [associations]
symbol:BA_5505 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000168001
OMA:SHPNGYN GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:NP_847665.1 RefSeq:YP_022172.1 RefSeq:YP_031353.1 PDB:2C20
PDBsum:2C20 ProteinModelPortal:Q81K34 SMR:Q81K34 DNASU:1085150
EnsemblBacteria:EBBACT00000011015 EnsemblBacteria:EBBACT00000018769
EnsemblBacteria:EBBACT00000021224 GeneID:1085150 GeneID:2819098
GeneID:2850681 KEGG:ban:BA_5505 KEGG:bar:GBAA_5505 KEGG:bat:BAS5114
ProtClustDB:CLSK917664 BioCyc:BANT260799:GJAJ-5189-MONOMER
BioCyc:BANT261594:GJ7F-5367-MONOMER EvolutionaryTrace:Q81K34
Uniprot:Q81K34
Length = 330
Score = 182 (69.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 77/331 (23%), Positives = 142/331 (42%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCH--EFHLVDLRVMDNCLK 86
I + G G+I SH ++L EG ++ D + H ED +F+ DLR
Sbjct: 4 ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGH--EDAITEGAKFYNGDLRDKAFLRD 61
Query: 87 V--TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI-SFNMLEASRISGVKRFFYASSA 143
V + ++ V + AAD + + + YNN + + +LE V +F ++S+A
Sbjct: 62 VFTQENIEAVMHFAAD--SLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTA 119
Query: 144 CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIY 203
Y E ++ ++ +E+ P + YG KLA E++ Y++ + ++ R+ N+
Sbjct: 120 ATYGE---VDVDLITEET---MTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVA 173
Query: 204 GPFGTWKGGREKAPAAFC-----RKALTSTDKFEMWGDGLQT------RSFTFIDECVE- 251
G G + P + AL +K M+GD T R + +++ V
Sbjct: 174 GATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAA 233
Query: 252 ---GVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRN-SD 307
G+ L + N+G+ S+ E+ + V + ++P P G R +
Sbjct: 234 HFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPARLVAS 293
Query: 308 NTLIKEKLGWAPS-MKLKDGLRITYFWIKEQ 337
+ KEKLGW P + +K + + W ++Q
Sbjct: 294 SQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQ 324
>UNIPROTKB|Q8E8H8 [details] [associations]
symbol:wcvA "UDP-glucuronate 4-epimerase WcvA"
species:211586 "Shewanella oneidensis MR-1" [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 181 (68.8 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 63/243 (25%), Positives = 110/243 (45%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM---------FCHEFHLVD 77
++ VTGA GFI +++++RL + GH ++ D N++ + FH +
Sbjct: 1 MKYLVTGAAGFIGANVSKRLCAMGHEVVGID-NLNDYYDVALKLARLAPLEALSNFHFIK 59
Query: 78 LRVMDN----CLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG 133
L + D L +G V +LAA G+ + N +N + +LE R
Sbjct: 60 LDLADREGIAKLFAQQGFQRVIHLAAQ-AGVRYSLDNPLAYADSNLVGHLTILEGCRHHK 118
Query: 134 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
++ YASS+ +Y L + D+ P Y K A+E + Y+ + +
Sbjct: 119 IEHLVYASSSSVYG----LNQKMPFSTEDSVD-HPISLYAATKKANELMSHTYSHLYQLP 173
Query: 194 CRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV 253
RF +YGP W G + A F KA+ + + +++ G +R FT+ID+ VEG+
Sbjct: 174 TTGLRFFTVYGP---W-GRPDMALFKFT-KAILAGETIDVYNHGDLSRDFTYIDDIVEGI 228
Query: 254 LRL 256
+R+
Sbjct: 229 IRV 231
>TIGR_CMR|SO_4686 [details] [associations]
symbol:SO_4686 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 181 (68.8 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 63/243 (25%), Positives = 110/243 (45%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM---------FCHEFHLVD 77
++ VTGA GFI +++++RL + GH ++ D N++ + FH +
Sbjct: 1 MKYLVTGAAGFIGANVSKRLCAMGHEVVGID-NLNDYYDVALKLARLAPLEALSNFHFIK 59
Query: 78 LRVMDN----CLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG 133
L + D L +G V +LAA G+ + N +N + +LE R
Sbjct: 60 LDLADREGIAKLFAQQGFQRVIHLAAQ-AGVRYSLDNPLAYADSNLVGHLTILEGCRHHK 118
Query: 134 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
++ YASS+ +Y L + D+ P Y K A+E + Y+ + +
Sbjct: 119 IEHLVYASSSSVYG----LNQKMPFSTEDSVD-HPISLYAATKKANELMSHTYSHLYQLP 173
Query: 194 CRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV 253
RF +YGP W G + A F KA+ + + +++ G +R FT+ID+ VEG+
Sbjct: 174 TTGLRFFTVYGP---W-GRPDMALFKFT-KAILAGETIDVYNHGDLSRDFTYIDDIVEGI 228
Query: 254 LRL 256
+R+
Sbjct: 229 IRV 231
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 180 (68.4 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 87/350 (24%), Positives = 152/350 (43%)
Query: 13 YEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASD-----WKKNEHMTED 67
YE++++E S K + +TG GFI S++ +L +I D + N +
Sbjct: 4 YEQIKQE-LLNSPKTWL-ITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQS 61
Query: 68 MFCHE----FHLV--DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI 121
+ E F + D+R C V GVD+V + AA +G + +S I N I
Sbjct: 62 LVTSEQWMRFSFINGDIRDYAICEAVVNGVDYVLHQAA-LGSVP--RSIADPITTNAANI 118
Query: 122 S--FNMLEASRISGVKRFFYASSACIY---PEFKQLETNVSLKESDAWPAEPQDAYGLEK 176
+ NML+A++ + VK F YA+S+ Y P ++E N+ P Y + K
Sbjct: 119 TGFLNMLQAAKEAEVKSFTYAASSSTYGDHPALPKVEQNIG---------NPLSPYAVTK 169
Query: 177 LASEELCKHYTKDFGIECRVG-RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWG 235
+E Y + +G E +G R+ N++G G + + D F + G
Sbjct: 170 YVNELYASVYARTYGFET-IGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIKGEDVF-ING 227
Query: 236 DGLQTRSFTFIDECVE-GVLRLTK-SDFREPV-NIGSDEMVSMNEMAEIVL-SFEDKKLP 291
DG +R F +ID V+ +L T S+ + V N+ + ++N++ + S +
Sbjct: 228 DGETSRDFCYIDNVVQMNILAATAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGIN 287
Query: 292 IHHIPGPEGVRG---RNSDNTLIKE--KLGWAPSMKLKDGLRITYFWIKE 336
++ P R R+S + K +LG+ + K+ +G+ W KE
Sbjct: 288 VNQNPNYRDFRAGDVRHSQADVSKAVTRLGYQYTHKILEGISEAMPWYKE 337
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 180 (68.4 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 87/350 (24%), Positives = 152/350 (43%)
Query: 13 YEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASD-----WKKNEHMTED 67
YE++++E S K + +TG GFI S++ +L +I D + N +
Sbjct: 4 YEQIKQE-LLNSPKTWL-ITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQS 61
Query: 68 MFCHE----FHLV--DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI 121
+ E F + D+R C V GVD+V + AA +G + +S I N I
Sbjct: 62 LVTSEQWMRFSFINGDIRDYAICEAVVNGVDYVLHQAA-LGSVP--RSIADPITTNAANI 118
Query: 122 S--FNMLEASRISGVKRFFYASSACIY---PEFKQLETNVSLKESDAWPAEPQDAYGLEK 176
+ NML+A++ + VK F YA+S+ Y P ++E N+ P Y + K
Sbjct: 119 TGFLNMLQAAKEAEVKSFTYAASSSTYGDHPALPKVEQNIG---------NPLSPYAVTK 169
Query: 177 LASEELCKHYTKDFGIECRVG-RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWG 235
+E Y + +G E +G R+ N++G G + + D F + G
Sbjct: 170 YVNELYASVYARTYGFET-IGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIKGEDVF-ING 227
Query: 236 DGLQTRSFTFIDECVE-GVLRLTK-SDFREPV-NIGSDEMVSMNEMAEIVL-SFEDKKLP 291
DG +R F +ID V+ +L T S+ + V N+ + ++N++ + S +
Sbjct: 228 DGETSRDFCYIDNVVQMNILAATAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGIN 287
Query: 292 IHHIPGPEGVRG---RNSDNTLIKE--KLGWAPSMKLKDGLRITYFWIKE 336
++ P R R+S + K +LG+ + K+ +G+ W KE
Sbjct: 288 VNQNPNYRDFRAGDVRHSQADVSKAVTRLGYQYTHKILEGISEAMPWYKE 337
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 180 (68.4 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 86/335 (25%), Positives = 149/335 (44%)
Query: 28 RISVTGAGGFIASH-IARRLKSEGHYIIAS----DW---KKNEHMTEDMFCHEFHLVDLR 79
R+ VTG GFIASH I ++ +Y+I + D+ KN + ++F D+
Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI- 77
Query: 80 VMDNCLKV---TKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135
+ +K+ T+ +D V + AA + F+++ Y N + ++ A+ + V+
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFE--FTYVNVYGTHVLVSAAHEARVE 135
Query: 136 RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
+F Y S+ +Y E + ES P +P + Y K A+E + Y + +
Sbjct: 136 KFIYVSTDEVYGGSLDKEFD----ESS--PKQPTNPYASSKAAAECFVQSYWEQYKFPVV 189
Query: 196 VGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 255
+ R N+YGP EK F L K + G GLQTR+F + + VE L
Sbjct: 190 ITRSSNVYGPHQY----PEKVIPKFI-SLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLT 244
Query: 256 -LTKSDFREPVNIGSDEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEGVRGRNSDNT---L 310
L K E NIG++ +S+ ++A E++ ++ + V R +++ +
Sbjct: 245 VLKKGKPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPM 304
Query: 311 IKEK---LGWAPSMKLKDGLRITYFWIKEQIEKEK 342
EK LGW P + K+G++ T W +E K
Sbjct: 305 KSEKIHGLGWRPKVPWKEGIKKTIEWYRENFHNWK 339
>TIGR_CMR|CJE_1287 [details] [associations]
symbol:CJE_1287 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 GO:GO:0005975 GO:GO:0050661 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0097171 HOGENOM:HOG000167987
KO:K03274 GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
RefSeq:YP_179275.1 ProteinModelPortal:Q5HTW0 STRING:Q5HTW0
GeneID:3231794 KEGG:cjr:CJE1287 PATRIC:20044370 OMA:GSYQFHT
ProtClustDB:CLSK871664 BioCyc:CJEJ195099:GJC0-1313-MONOMER
Uniprot:Q5HTW0
Length = 317
Score = 177 (67.4 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 87/332 (26%), Positives = 139/332 (41%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEF-HLVDLRVMDNCL 85
+R+++TG GFI S +A L+ E H I+ D ++ E+ F H +L D L
Sbjct: 1 MRVAITGGAGFIGSQLALNLQ-EKHEILIIDKMRSSATFENGNLQSFGHFKNLLEFDGEL 59
Query: 86 --------KVTKGVDH-----VFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRI 131
KV K ++ +F+ AA F Q+ V+ N NT F +E S I
Sbjct: 60 FAGDINDEKVLKKIEDFKPEIIFHQAAISDTTVFDQTK--VLQTNLNTFKDF--IELS-I 114
Query: 132 SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFG 191
+ YASSA +Y + K +T V E EP++ Y KL ++L K Y
Sbjct: 115 DLNAKLIYASSASVYGDAKSPQT-VGKDE------EPKNPYAFSKLMMDKLAKKYYDKAH 167
Query: 192 IECRVG-RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 250
+ VG R+ N+YG +K F + L + G R FT+I + +
Sbjct: 168 L---VGLRYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSDQIYRDFTYIKDVI 224
Query: 251 EGVLRLTKSDFREPV-NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNT 309
L D + V N+GS + + ++ +I+ LP +IP P +
Sbjct: 225 NA--NLIALDSKCGVYNVGSGKARTFQDIVDILQKELKTDLPCEYIPNPYVKSYQFHTEA 282
Query: 310 LIKEKLGWAPSMKLKDGLRITYFWIKEQIEKE 341
+ + + P L++G++ IK EKE
Sbjct: 283 KLDQTWDYQPKFSLEEGIKDYLDEIKRLFEKE 314
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 178 (67.7 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 85/335 (25%), Positives = 147/335 (43%)
Query: 28 RISVTGAGGFIASHIARRLKSE-GHYIIAS----DW---KKNEHMTEDMFCHEF---HLV 76
R+ VTG GFIASH+ L + Y+I + D+ KN + ++F +
Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 78
Query: 77 DLRVMDNCLKVTKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135
D + +V K +D V + AA + F+++ Y N + ++ A+ +GV+
Sbjct: 79 DSHFVKLLFEVEK-IDIVLHFAAQTHVDLSFVRAFE--FTYVNVYGTHVLVNAAYEAGVE 135
Query: 136 RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
+F Y S+ +Y E + ES P +P + Y K A+E + Y + +
Sbjct: 136 KFIYVSTDEVYGGSLDQEFD----ESS--PKQPTNPYASSKAAAECFVQSYWERYKFPVV 189
Query: 196 VGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 255
+ R N+YGP EK F L K + G GLQ R+F + + VE L
Sbjct: 190 ITRSSNVYGPHQY----PEKVIPKFI-SLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLT 244
Query: 256 -LTKSDFREPVNIGSDEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEGVRGRNSDNT---L 310
LTK + E NIG++ +S+ ++A E++ ++ + V R ++ +
Sbjct: 245 VLTKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPM 304
Query: 311 IKEK---LGWAPSMKLKDGLRITYFWIKEQIEKEK 342
EK LGW P + ++G++ T W ++ K
Sbjct: 305 KSEKIHSLGWKPKVPWEEGIKKTVEWYRKNFHNWK 339
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 177 (67.4 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 86/335 (25%), Positives = 149/335 (44%)
Query: 28 RISVTGAGGFIASH-IARRLKSEGHYIIAS----DW---KKNEHMTEDMFCHEFHLVDLR 79
R+ VTG GFIASH I ++ +Y+I + D+ KN + ++F D+
Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI- 77
Query: 80 VMDNCLKV---TKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135
+ +K+ T+ +D V + AA + F+++ Y N + ++ A+ + V+
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFE--FTYVNVYGTHVLVSAAHEARVE 135
Query: 136 RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
+F Y S+ +Y E + ES P +P + Y K A+E + Y + +
Sbjct: 136 KFIYVSTDEVYGGSLDKEFD----ESS--PKQPTNPYASSKAAAECFVQSYWEQYKFPVV 189
Query: 196 VGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 255
+ R N+YGP EK F L K + G GLQTR+F + + VE L
Sbjct: 190 ITRSSNVYGPHQY----PEKVIPKFI-SLLQHNRKCCIHGTGLQTRNFLYATDVVEAFLT 244
Query: 256 -LTKSDFREPVNIGSDEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEGVRGRNSDNT---L 310
L K E NIG++ +S+ ++A E++ ++ + V R +++ +
Sbjct: 245 VLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPM 304
Query: 311 IKEK---LGWAPSMKLKDGLRITYFWIKEQIEKEK 342
EK LGW P + K+G++ T W +E K
Sbjct: 305 KSEKIHGLGWRPKVPWKEGIKKTIEWYRENFHNWK 339
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 175 (66.7 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 79/332 (23%), Positives = 149/332 (44%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCH-------EFHLV--DLR 79
+TG GFI S++ L ++ D ++H +++ F+ V D+R
Sbjct: 20 ITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDIR 79
Query: 80 VMDNC---LKVTK-GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMIS--FNMLEASRISG 133
+++C L K GVD++ + AA +G + +S ++ N+ I+ ML A++ +
Sbjct: 80 QLEDCQTALSHYKSGVDYILHQAA-LGSVP--RSIADPLLTNSANITGFLTMLTAAKETQ 136
Query: 134 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
VK F YA+S+ Y + L K DA +P Y + K +E + K +G+
Sbjct: 137 VKSFVYAASSSTYGDHPALP-----KVEDAI-GKPLSPYAVTKYVNELYADVFHKTYGLN 190
Query: 194 CRVGRFHNIYGPFGTWKGGREKAPAAFCRK---ALTSTDKFEMWGDGLQTRSFTFIDECV 250
C R+ N++G + + A AA K A+ + ++ + GDG +R F F++ V
Sbjct: 191 CTGLRYFNVFGK----RQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAV 246
Query: 251 EG-VLRLTKSDF--REPVNIGSDEMVSMNEM---AEIVLS---FEDKKLPIHHIPGPEGV 301
+ +L T +D + N+ + S+N + ++ L + +K P + V
Sbjct: 247 QANILAATANDAGKNQVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTYQDFRAGDV 306
Query: 302 RGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 333
R +D + K +G+ P K++ G+ W
Sbjct: 307 RHSQADISKAKSLIGFEPEFKIQQGIDKAMPW 338
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 175 (66.7 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 79/332 (23%), Positives = 149/332 (44%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCH-------EFHLV--DLR 79
+TG GFI S++ L ++ D ++H +++ F+ V D+R
Sbjct: 20 ITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDIR 79
Query: 80 VMDNC---LKVTK-GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMIS--FNMLEASRISG 133
+++C L K GVD++ + AA +G + +S ++ N+ I+ ML A++ +
Sbjct: 80 QLEDCQTALSHYKSGVDYILHQAA-LGSVP--RSIADPLLTNSANITGFLTMLTAAKETQ 136
Query: 134 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
VK F YA+S+ Y + L K DA +P Y + K +E + K +G+
Sbjct: 137 VKSFVYAASSSTYGDHPALP-----KVEDAI-GKPLSPYAVTKYVNELYADVFHKTYGLN 190
Query: 194 CRVGRFHNIYGPFGTWKGGREKAPAAFCRK---ALTSTDKFEMWGDGLQTRSFTFIDECV 250
C R+ N++G + + A AA K A+ + ++ + GDG +R F F++ V
Sbjct: 191 CTGLRYFNVFGK----RQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAV 246
Query: 251 EG-VLRLTKSDF--REPVNIGSDEMVSMNEM---AEIVLS---FEDKKLPIHHIPGPEGV 301
+ +L T +D + N+ + S+N + ++ L + +K P + V
Sbjct: 247 QANILAATANDAGKNQVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTYQDFRAGDV 306
Query: 302 RGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 333
R +D + K +G+ P K++ G+ W
Sbjct: 307 RHSQADISKAKSLIGFEPEFKIQQGIDKAMPW 338
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 173 (66.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 76/309 (24%), Positives = 133/309 (43%)
Query: 28 RISVTGAGGFIASHIARRLKSEGH-------YIIASDWKKNEHMTEDMFCH-EFHLVDLR 79
+I VTGA GFI SH+ L G+ Y + W +H+ ++ + D+R
Sbjct: 7 KILVTGADGFIGSHLTEALLMRGYDTRAFVYYNSFNSWGWLDHLDPELLKSLDVFAGDIR 66
Query: 80 VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI--SFNMLEASRISGVKRF 137
+ KG D V +LAA + S HS Y +T + + N+++A+R GV +
Sbjct: 67 DPHGVREAMKGCDVVLHLAALIA---IPYSYHSPDTYVDTNVKGTLNVVQAARELGVAKV 123
Query: 138 FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
+ S++ +Y + V + E P + Q Y K+ ++++ + F +
Sbjct: 124 VHTSTSEVYGTARF----VPITEEH--PLQGQSPYSASKIGADQIAMSFYSSFDTPVAII 177
Query: 198 RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT 257
R N YGP + R P + + S + G TR ++ + V G + +
Sbjct: 178 RPFNTYGPR---QSARAFIPTVITQ--IASGARTLRLGALHPTRDLNYVADTVAGFIAVA 232
Query: 258 KSD--FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKL 315
+S+ E +NIGS+ +SM E A ++ + I + E +R S+ E+L
Sbjct: 233 ESEKSVGEVINIGSNFEISMGETARMIADVMGADVEI--VTDAERLRPDKSE----VERL 286
Query: 316 GWAPSMKLK 324
WA + K K
Sbjct: 287 -WADTSKAK 294
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 173 (66.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 68/265 (25%), Positives = 117/265 (44%)
Query: 91 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFK 150
+ HV +D +G IQ N I+ T++ + S GVK+ + S+ +Y +
Sbjct: 93 ITHVDESYSDR--IGTIQDN---IISTTTLLE--SIVNSPYKGVKKLVHISTDEVYGD-- 143
Query: 151 QLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWK 210
E ES + P P + Y K A E + + Y + + + R +N+YGP +
Sbjct: 144 SFEDTTPKSESASLP-NPTNPYAASKAACEMVIRSYWHSYKLPYVMVRMNNVYGP----R 198
Query: 211 GGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT-KSDFREPVNIGS 269
K F + AL + + GDGL TRS+ ++++C E + R+ + E NIG+
Sbjct: 199 QIHTKLIPKFTKLALDGKP-YPLMGDGLHTRSWMYVEDCSEAITRVALEGTLGEIYNIGT 257
Query: 270 D-EM--VSMNEMAEIVLSFEDKKLP----IHHIPG-PEGVRGRNSDNTLIKEKLGWAPSM 321
D EM + + +M +S + P IP P R D + I+ +GW +
Sbjct: 258 DFEMTNIELTKMIHFTVSKLLNREPTAPTFAPIPDRPYHDRRYYIDFSKIRNAMGWQCTT 317
Query: 322 KLKDGLRITY-FWIKEQIEKEKTQG 345
+GL T +++K + + QG
Sbjct: 318 PFSEGLMKTIDYYVKLHVATARLQG 342
>TAIR|locus:2118711 [details] [associations]
symbol:GAE1 "UDP-D-glucuronate 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161577 EMBL:AY661562 EMBL:AY056303
EMBL:AY099855 EMBL:BT000308 EMBL:AY085505 IPI:IPI00530645
PIR:A85356 RefSeq:NP_194773.1 UniGene:At.20969 UniGene:At.67043
HSSP:P04397 ProteinModelPortal:Q9M0B6 SMR:Q9M0B6 STRING:Q9M0B6
PaxDb:Q9M0B6 PRIDE:Q9M0B6 EnsemblPlants:AT4G30440.1 GeneID:829167
KEGG:ath:AT4G30440 TAIR:At4g30440 HOGENOM:HOG000168000
InParanoid:Q9M0B6 KO:K08679 OMA:DELMSET PhylomeDB:Q9M0B6
ProtClustDB:CLSN2679288 Genevestigator:Q9M0B6 GO:GO:0050378
Uniprot:Q9M0B6
Length = 429
Score = 174 (66.3 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 83/339 (24%), Positives = 144/339 (42%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH------------MTEDMFCHEFH 74
+ + VTGA GF+ SH++ L+ G ++ D N + + +F E
Sbjct: 88 ISVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEGD 147
Query: 75 LVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV 134
L D +++ V HV +LAA G+ + N +++N N+LE + +
Sbjct: 148 LNDAKLLAKLFDVV-AFTHVMHLAAQ-AGVRYALENPQSYVHSNIAGLVNLLEICKAANP 205
Query: 135 K-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
+ +ASS+ +Y L V ESD +P Y K A EE+ Y +G+
Sbjct: 206 QPAIVWASSSSVYG----LNEKVPFSESDRTD-QPASLYAATKKAGEEITHTYNHIYGLA 260
Query: 194 CRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQ--TRSFTFIDECVE 251
RF +YGP W G + A +F R L G R FT+ID+ V+
Sbjct: 261 ITGLRFFTVYGP---W-GRPDMAYFSFTRNILQGKPITIYRGKNRVDLARDFTYIDDIVK 316
Query: 252 GVL-------RLTKSDFRE----PV---NIGSDEMVSMNEMAEIV---LSFEDKKLPIHH 294
G L + T S ++ P N+G+ V++ + +I+ L + K+ +
Sbjct: 317 GCLGSLDSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPILVDILEKHLKVKAKRNFVE- 375
Query: 295 IPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 333
+PG V +++ + + + G+ P+ L+ GL+ W
Sbjct: 376 MPGNGDVPFTHANISSARNEFGYKPTTDLETGLKKFVRW 414
>UNIPROTKB|B4E3U7 [details] [associations]
symbol:UXS1 "cDNA FLJ57788, highly similar to
UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC018878 GO:GO:0048040 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK304872 IPI:IPI00910001 SMR:B4E3U7 STRING:B4E3U7
Ensembl:ENST00000428048 UCSC:uc010ywh.2 Uniprot:B4E3U7
Length = 185
Score = 152 (58.6 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 44/146 (30%), Positives = 68/146 (46%)
Query: 128 ASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELC 183
A R+ R AS++ +Y + V + D W P P+ Y K +E +C
Sbjct: 34 AKRVGA--RLLLASTSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMC 86
Query: 184 KHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSF 243
Y K G+E RV R N +GP GR + F +AL + ++G G QTR+F
Sbjct: 87 YAYMKQEGVEVRVARIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAF 143
Query: 244 TFIDECVEGVLRLTKSDFREPVNIGS 269
++ + V G++ L S+ PVN+ S
Sbjct: 144 QYVSDLVNGLVALMNSNVSSPVNLVS 169
>UNIPROTKB|C9JE50 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 GO:GO:0048040 HGNC:HGNC:17729
IPI:IPI00910001 ProteinModelPortal:C9JE50 SMR:C9JE50 STRING:C9JE50
PRIDE:C9JE50 Ensembl:ENST00000441952 ArrayExpress:C9JE50
Bgee:C9JE50 Uniprot:C9JE50
Length = 171
Score = 152 (58.6 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 44/146 (30%), Positives = 68/146 (46%)
Query: 128 ASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELC 183
A R+ R AS++ +Y + V + D W P P+ Y K +E +C
Sbjct: 34 AKRVGA--RLLLASTSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMC 86
Query: 184 KHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSF 243
Y K G+E RV R N +GP GR + F +AL + ++G G QTR+F
Sbjct: 87 YAYMKQEGVEVRVARIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAF 143
Query: 244 TFIDECVEGVLRLTKSDFREPVNIGS 269
++ + V G++ L S+ PVN+ S
Sbjct: 144 QYVSDLVNGLVALMNSNVSSPVNLVS 169
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 170 (64.9 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 87/341 (25%), Positives = 150/341 (43%)
Query: 23 PSEKLRISVTGAGGFIASHIARRL-KSEGHYIIAS----DW---KKNEHMTEDMFCHEFH 74
P + R+ VTG GFIASH+ L ++ +Y+I + D+ KN + ++F
Sbjct: 19 PRFEKRLLVTGGAGFIASHVVVSLVRNYPNYLIINLDKLDYCASLKNLETVSEKENYKFI 78
Query: 75 LVDLRVMDNCLKV---TKGVDHVFNLAADMG-GMGFIQSNHSV-IMYNNTMISFNMLEAS 129
D+ + +K T+ +D V + AA + F H++ Y N + ++ A+
Sbjct: 79 QGDI-CEPHFIKQLFETEKIDIVLHFAAQTHVDLSFW---HALEFTYVNVYGTNVLVAAA 134
Query: 130 RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD 189
+ V++F Y S+ +Y T+ ES P P + Y K A+E + Y +
Sbjct: 135 HEANVEKFVYVSTDEVYGG----STDQEFDESS--PKCPTNPYASSKAAAECFVQSYWER 188
Query: 190 FGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC 249
+ + R N+YGP EK F L K + G GLQ R+F + +
Sbjct: 189 YQFPVVITRSSNVYGPHQY----PEKVIPKFI-SLLQQNRKCCIHGSGLQRRNFLYATDV 243
Query: 250 VEGVLRLTKSDFR-EPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG-PEGVRGRNSD 307
VE L + K E NIG++ +S+ ++A+ ++ K + + V+ R ++
Sbjct: 244 VEAFLTVLKEGKPGEIYNIGTNFEMSIVQLAKELIHLIKKTSSESEMEHWMDYVKDRPTN 303
Query: 308 NT---LIKEK---LGWAPSMKLKDGLRITYFWIKEQIEKEK 342
+ + EK LGW P + K+G++ T W KE K
Sbjct: 304 DLRYPMSSEKMHNLGWRPKVPWKEGIKKTIEWYKENFHNWK 344
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 166 (63.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 80/333 (24%), Positives = 137/333 (41%)
Query: 24 SEKLRISVTGAGGFIASHIARRLKSE-GHY-IIASD---WKKN-EHMTEDMFCHEFHLVD 77
S++ + VTG GFI SH+ L H+ II D + N +++ + +
Sbjct: 4 SDRRTVLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQYCSNLKNLRSVQASSSYSFIP 63
Query: 78 LRVMDNC----LKVTKGVDHVFNLAADMG-GMGFI-QSNHSVIMYNNTMISFNMLEASRI 131
V D L T+ +D VF+ AA+ F+ S + + T + ++ AS
Sbjct: 64 GDVCDPLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAV---LVRASLE 120
Query: 132 SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFG 191
+ V+RF Y S+ +Y + +V + P P + Y K A+E + Y
Sbjct: 121 ASVQRFIYISTDEVYGD------SVDQPFDELSPKRPTNPYSRSKAAAESIVTSYWLKHK 174
Query: 192 IECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVE 251
+ R N+YGP + EK F L K + G GLQ+R F ++ + +
Sbjct: 175 FPAVITRSSNVYGP----RQHHEKVIPRFL-SLLQQQQKCTIQGSGLQSRHFLYVSDVTD 229
Query: 252 GVLR-LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG-PEGVRGRNSD-- 307
L + K E NIG+ + + ++A ++ K + + E V R
Sbjct: 230 AFLTVMEKGILGEIYNIGTGFEIPIIQLARELVQMTVKSVSAESLDDWLEFVEDRPVTEL 289
Query: 308 ----NTLIKEKLGWAPSMKLKDGLRITYFWIKE 336
N++ +LGW P + +G+R T W +E
Sbjct: 290 RYPMNSVKLHRLGWRPKVAWTEGIRRTVQWYEE 322
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 166 (63.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 83/335 (24%), Positives = 145/335 (43%)
Query: 28 RISVTGAGGFIASHIARRLKSE-GHYIIAS----DW---KKNEHMTEDMFCHEF---HLV 76
R+ VTG GFIASH+ L + +Y+I + D+ KN + ++F +
Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 78
Query: 77 DLRVMDNCLKVTKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135
D + + K +D V + AA + F+++ Y N + ++ + + V+
Sbjct: 79 DSHFVKRLFESEK-IDIVLHFAAQTHVDLSFVRAFE--FTYVNVYGTHVLVNTAYEARVE 135
Query: 136 RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
+F Y S+ +Y E + ES P +P + Y K A+E + Y + +
Sbjct: 136 KFIYVSTDEVYGGSLDQEFD----ESS--PKQPTNPYASSKAAAECFVQSYWERYKFPVV 189
Query: 196 VGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 255
+ R N+YGP EK F L K + G GLQ R+F + + VE L
Sbjct: 190 ITRSSNVYGPHQY----PEKVIPKFI-SLLQHDRKCCIHGSGLQRRNFLYAADVVEAFLT 244
Query: 256 -LTKSDFREPVNIGSDEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEGVRGRNSDNT---L 310
LTK + E NIG++ +S+ ++A E++ ++ + V R ++ +
Sbjct: 245 VLTKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSDSETERWVDYVSDRPHNDMRYPM 304
Query: 311 IKEK---LGWAPSMKLKDGLRITYFWIKEQIEKEK 342
EK LGW P + ++G++ T W +E K
Sbjct: 305 KSEKIHSLGWKPKVPWEEGIKKTVEWYRENFHNWK 339
>TIGR_CMR|GSU_2240 [details] [associations]
symbol:GSU_2240 "UDP-glucose 4-epimerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_953289.1 ProteinModelPortal:Q74AW0
GeneID:2687202 KEGG:gsu:GSU2240 PATRIC:22027335 OMA:VEHARQG
ProtClustDB:CLSK828777 BioCyc:GSUL243231:GH27-2212-MONOMER
Uniprot:Q74AW0
Length = 326
Score = 165 (63.1 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 82/318 (25%), Positives = 133/318 (41%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD----NC 84
+ VTG G+I SH+ R+L G+ ++ D D H LV + D +
Sbjct: 3 VLVTGGAGYIGSHVVRQLSEAGYTVVVYDNLSTGF--PDALVHGERLVTGDLSDTARLDA 60
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMY--NNTMISFNMLEASRISGVKRFFYASS 142
L V G V + AA + +S + + Y NNT + N+L A GV+RF ++S+
Sbjct: 61 LFVEYGFSTVLHFAASIIAP---ESVTAPLKYYGNNTRNTLNLLGACVKHGVERFIFSST 117
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNI 202
A +Y ++ V+ +ES P P YG KL SE + + G+ R+ N+
Sbjct: 118 AAVYGI---PDSGVAAEESATVPINP---YGTSKLMSEWMLRDVCAAHGMRSVALRYFNV 171
Query: 203 YGPFGTWKGGREKAPAAF-----CRKALTSTDKFEMWG------DGLQTRSFTFIDECVE 251
G + G+ A C+ AL DK ++G DG R + +++
Sbjct: 172 AGADPQARMGQRTPEATHLIKVSCQAALGLRDKVCIFGTDYPTPDGTGIRDYIHVEDLAS 231
Query: 252 GVLR----LTKSDFREPVNIGSDEMVSMNEMAEIV-----LSFEDKKLPIHHIPG-PEGV 301
L L K +N+G S+ E+ ++V + F ++ P PG P +
Sbjct: 232 AHLAALSYLEKGGESTRINVGYGSGSSVREVIDMVRRVSGVHFLAEEAPRR--PGDPPSL 289
Query: 302 RGRNSDNTLIKEKLGWAP 319
R +D + LGW P
Sbjct: 290 VAR-ADRA--RTLLGWTP 304
>TAIR|locus:2076066 [details] [associations]
symbol:GAE6 "UDP-D-glucuronate 4-epimerase 6"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006569 "tryptophan catabolic process" evidence=RCA]
[GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AP001297 HSSP:P04397 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AJ879893
EMBL:AF083691 EMBL:AF370210 EMBL:AY056117 EMBL:AY062625
EMBL:AY133771 IPI:IPI00538638 RefSeq:NP_189024.1 UniGene:At.24934
UniGene:At.67131 UniGene:At.71799 ProteinModelPortal:Q9LIS3
SMR:Q9LIS3 IntAct:Q9LIS3 STRING:Q9LIS3 PaxDb:Q9LIS3 PRIDE:Q9LIS3
EnsemblPlants:AT3G23820.1 GeneID:821965 KEGG:ath:AT3G23820
TAIR:At3g23820 InParanoid:Q9LIS3 OMA:NTAMPFS PhylomeDB:Q9LIS3
BRENDA:5.1.3.6 Genevestigator:Q9LIS3 Uniprot:Q9LIS3
Length = 460
Score = 162 (62.1 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 85/364 (23%), Positives = 146/364 (40%)
Query: 3 STEGTYGAYTYEELEREPYWPSEK--LRISVTGAGGFIASHIARRLKSEGHYIIA----S 56
S+ + G +E+ R+ L + VTGA GF+ SH + L+ G ++ +
Sbjct: 86 SSSSSIGGAAWEKRVRQSSTAKRPHGLSVLVTGAAGFVGSHCSLALRKRGDGVLGFDNFN 145
Query: 57 DW------KKNEHMTE--DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQ 108
D+ + + + E +F E L D ++ V H+ +LAA G+ +
Sbjct: 146 DYYDPSLKRARQELLEKQQVFIVEGDLNDGPLLRKLFDVVP-FTHILHLAAQ-AGVRYAM 203
Query: 109 SNHSVIMYNNTMISFNMLEASRISGVK-RFFYASSACIYPEFKQLETNVSLKESDAWPAE 167
N + +N N+LE ++ + + +ASS+ +Y L T E +
Sbjct: 204 KNPQSYIASNIAGFVNLLEVAKAANPQPAIVWASSSSVYG----LNTENPFSEEHRTD-Q 258
Query: 168 PQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAL-- 225
P Y K A EE+ Y +G+ RF +YGP W G + A F + L
Sbjct: 259 PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGP---W-GRPDMAYFFFTKDILHG 314
Query: 226 TSTDKFEMWGDGLQTRSFTFIDECVEGVL-------RLTKSDFREP-------VNIGSDE 271
S D + + R FT+ID+ V+G + + T S ++ N+G+
Sbjct: 315 KSIDIYRTQDNQEVARDFTYIDDIVKGCVGALDTAEKSTGSGGKKRGQAQLRVYNLGNTS 374
Query: 272 MVSMNEMAEIVLSFEDKKLPIHHIPGPEG--VRGRNSDNTLIKEKLGWAPSMKLKDGLRI 329
V + + I+ K H I P V +++ +L + G+ P+ L GLR
Sbjct: 375 PVPVGRLVSILEGLLGTKAKKHLIKMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRK 434
Query: 330 TYFW 333
W
Sbjct: 435 FVKW 438
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 155 (59.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 80/333 (24%), Positives = 135/333 (40%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASD---WKKNEHMTEDMFCHEFHL-VDLRVMDNCLK 86
VTG GFI + S G ++ D + N + + + H+ V + D L
Sbjct: 6 VTGGAGFIGGNFVLEAVSRGIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDGAL- 64
Query: 87 VTKGV-----DHVFNLAAD------MGGMG-FIQSN--HSVIMYNNTMISFNMLEASRIS 132
VT+ + D V N AA+ + G G FIQ+N ++ + + L +R
Sbjct: 65 VTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRRD 124
Query: 133 GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGI 192
RF + S+ +Y ET K ++ P P Y K AS+ L + + +G+
Sbjct: 125 AF-RFLHVSTDEVYGTLG--ETG---KFTETTPYAPNSPYSASKAASDHLVRAFHHTYGL 178
Query: 193 ECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG 252
N YGP+ EK KAL + ++GDG Q R + F+ + E
Sbjct: 179 PVLTTNCSNNYGPYHF----PEKLIPLVIAKALAG-EPLPVYGDGKQVRDWLFVSDHCEA 233
Query: 253 VLR-LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLP----------IHHIPGPEGV 301
+ L K E N+G + E+ + + + D+ P I ++ G
Sbjct: 234 IRTVLAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGH 293
Query: 302 RGRNS-DNTLIKEKLGWAPSMKLKDGLRITYFW 333
R + D + +K++LGW P+ + G+ +T W
Sbjct: 294 DRRYAIDASKLKDELGWEPAYTFEQGIALTVDW 326
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 149 (57.5 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 83/338 (24%), Positives = 139/338 (41%)
Query: 28 RISVTGAGGFIASHIARRL-KSEGHYIIASD---WKKN-EHMTE--DMFCHEFHLVDL-- 78
+I VTG GFI S + R + ++ ++ D + N E +T+ D + F VD+
Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62
Query: 79 RVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASR-----ISG 133
R + + D V +LAA+ I S I N + +FN+LEA+R +
Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQ-TNIVGTFNLLEAARAYRQQMPS 121
Query: 134 VK----RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD 189
K RF + S+ +Y + + L A P P Y K +S+ L + + +
Sbjct: 122 EKHEAFRFHHISTDEVYGDLSGTD---DLFTETA-PYAPSSPYSASKASSDHLVRAWLRT 177
Query: 190 FGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC 249
+G+ V N YGP+ EK AL ++GDG+Q R + F+++
Sbjct: 178 YGLPTIVTNCSNNYGPYHF----PEKLIPLMILNALDGKP-LPVYGDGMQIRDWLFVEDH 232
Query: 250 VEGVLRL-TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLP------------IHHIP 296
+ ++ T+ E NIG + E+ + + + ++ P I +
Sbjct: 233 ARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQ 292
Query: 297 GPEGVRGRNS-DNTLIKEKLGWAPSMKLKDGLRITYFW 333
G R + D I+ LGW P + GLR T W
Sbjct: 293 DRPGHDARYAVDTAKIRRDLGWQPLETFESGLRKTVQW 330
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 149 (57.5 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 80/333 (24%), Positives = 134/333 (40%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASD---WKKNEHMTEDMFCHEFHL-VDLRVMDNCLK 86
VTG GFI + S G ++ D + N + + + H+ V + D L
Sbjct: 6 VTGRAGFIGGNFVLEAVSRGIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDGAL- 64
Query: 87 VTKGV-----DHVFNLAAD------MGGMG-FIQSN--HSVIMYNNTMISFNMLEASRIS 132
VT+ + D V N AA+ + G G FIQ+N ++ + + L +R
Sbjct: 65 VTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRRD 124
Query: 133 GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGI 192
RF + S+ +Y ET K ++ P P Y K AS+ L + + +G+
Sbjct: 125 AF-RFLHVSTDEVYGTLG--ETG---KFTETTPYAPNSPYSASKAASDHLVRAFHHTYGL 178
Query: 193 ECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG 252
N YGP+ EK KAL + ++GDG Q R + F+ + E
Sbjct: 179 PVLTTNCSNNYGPYHF----PEKLIPLVIAKALAG-EPLPVYGDGKQVRDWLFVSDHCEA 233
Query: 253 VLR-LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLP----------IHHIPGPEGV 301
+ L K E N+G + E+ + + + D+ P I ++ G
Sbjct: 234 IRTVLAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGH 293
Query: 302 RGRNS-DNTLIKEKLGWAPSMKLKDGLRITYFW 333
R + D + +K++LGW P+ + G+ T W
Sbjct: 294 DRRYAIDASKLKDELGWEPAYTFEQGIAQTVDW 326
>UNIPROTKB|C9JCB7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004
HGNC:HGNC:17729 IPI:IPI00916638 ProteinModelPortal:C9JCB7
SMR:C9JCB7 STRING:C9JCB7 PRIDE:C9JCB7 Ensembl:ENST00000416298
ArrayExpress:C9JCB7 Bgee:C9JCB7 Uniprot:C9JCB7
Length = 134
Score = 129 (50.5 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 40/133 (30%), Positives = 62/133 (46%)
Query: 118 NTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYG 173
NT+ + NML ++ G R AS++ +Y + V + D W P P+ Y
Sbjct: 11 NTIGTLNMLGLAKRVGA-RLLLASTSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYD 64
Query: 174 LEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEM 233
K +E +C Y K G+E RV R N +GP GR + F +AL + +
Sbjct: 65 EGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTV 121
Query: 234 WGDGLQTRSFTFI 246
+G G QTR+F ++
Sbjct: 122 YGSGSQTRAFQYV 134
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 90/341 (26%), Positives = 142/341 (41%)
Query: 28 RISVTGAGGFIASHIARRL-KSEGHYIIASD---WKKN-EHMTE--DMFCHEFHLVDL-- 78
+I VTG GFI S + R + ++ ++ D + N E +TE D + F VD+
Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLTYAGNLESLTEVADNPRYAFEQVDICD 62
Query: 79 RV-MDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-- 135
R +D + D V +LAA+ I S I N + +FN+LEA+R +
Sbjct: 63 RAELDRVFAQYRP-DAVMHLAAESHVDRSIGSAGEFIQ-TNIVGTFNLLEAARAYWQQMP 120
Query: 136 -------RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTK 188
RF + S+ +Y + + L A P P Y K +S+ L + + +
Sbjct: 121 SEQHEAFRFHHISTDEVYGDLGGTD---DLFTETA-PYAPSSPYSASKASSDHLVRAWLR 176
Query: 189 DFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 248
+G+ V N YGP+ EK AL ++GDG+Q R + F+++
Sbjct: 177 TYGLPTIVTNCSNNYGPYHF----PEKLIPLMILNALDGKP-LPVYGDGMQIRDWLFVED 231
Query: 249 CVEGVLRL-TKSDFREPVNIGSD------EMVS-----MNEMAEI----VLSFEDKKLPI 292
+ ++ T+ E NIG E+V + E+A V +ED +
Sbjct: 232 HARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFV 291
Query: 293 HHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 333
PG + VR D I+ LGW P + GLR T W
Sbjct: 292 QDRPGHD-VRYA-VDAAKIRRDLGWLPLETFESGLRKTVQW 330
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 145 (56.1 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 73/320 (22%), Positives = 132/320 (41%)
Query: 27 LRISVTGAGGFIAS---HIARRLKSEGHYIIASDWKKNEHMTEDM--FCHEFHLVDLRVM 81
+R+ VTG GFI + H+A R ++ I D E + LV +
Sbjct: 1 MRLLVTGGAGFIGANFVHLALR-EARTSSITVLDALTYAGSRESLAPVADRIRLVQGDIT 59
Query: 82 DNCL--KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFY 139
D L + D V + AA+ + ++ +++N + ++ +LEA R V R +
Sbjct: 60 DAALVGDLVAESDAVVHFAAETHVDNAL-ADPEPFLHSNVVGTYTILEAVRRHNV-RLHH 117
Query: 140 ASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRF 199
S+ +Y + LE + + ++ P P Y K A++ L + + + +G+ +
Sbjct: 118 VSTDEVYGD---LELDNPARFNETTPYNPSSPYSSTKAAADLLVRAWVRSYGVRATISNC 174
Query: 200 HNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR-LTK 258
N YGP+ EK LT + +++G G R + +D+ V R LT
Sbjct: 175 SNNYGPYQHV----EKFIPRQITNVLTGR-RPKLYGAGANVRDWIHVDDHNSAVWRILTD 229
Query: 259 SDFREPVNIGSD-EMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNS-DNTLIKEKLG 316
IG++ E ++ M I+ H+ G R + D + ++++LG
Sbjct: 230 GTIGRTYLIGAECERNNLTVMRTILKLMGRDPDDFDHVTDRAGHDLRYAIDPSTLQDELG 289
Query: 317 WAPS-MKLKDGLRITYFWIK 335
WAP + GL T W +
Sbjct: 290 WAPKHTDFEAGLTDTIDWYR 309
>TAIR|locus:2057786 [details] [associations]
symbol:3BETAHSD/D2
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;ISS] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016020
"membrane" evidence=IDA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IGI;IDA]
[GO:0016126 "sterol biosynthetic process" evidence=RCA] [GO:0019745
"pentacyclic triterpenoid biosynthetic process" evidence=RCA]
UniPathway:UPA00770 InterPro:IPR002225 InterPro:IPR003388
Pfam:PF01073 Pfam:PF02453 PROSITE:PS50845 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC004484
GO:GO:0047012 EMBL:DQ302749 EMBL:BX818951 EMBL:AK176177
IPI:IPI00540500 IPI:IPI00657508 IPI:IPI00929941 PIR:C84658
RefSeq:NP_001031422.1 RefSeq:NP_180194.2 UniGene:At.38921
ProteinModelPortal:Q67ZE1 SMR:Q67ZE1 PaxDb:Q67ZE1 PRIDE:Q67ZE1
EnsemblPlants:AT2G26260.1 GeneID:817166 KEGG:ath:AT2G26260
TAIR:At2g26260 InParanoid:Q67ZE1 OMA:DTLLWKD PhylomeDB:Q67ZE1
ProtClustDB:CLSN2716544 Genevestigator:Q67ZE1 Uniprot:Q67ZE1
Length = 564
Score = 126 (49.4 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 61/230 (26%), Positives = 95/230 (41%)
Query: 31 VTGAGGFIASHIAR----------RLKSEGHYIIASDWKKNEHMTEDMFCHEFHLV--DL 78
VTG GF A H+ R+ I+ + N + E + + DL
Sbjct: 14 VTGGRGFAARHLVEMLVRYEMFCVRIADLAPAIMLDPQEGNGVLDEGLRSGRVQYISADL 73
Query: 79 RVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138
R +K +G + VF++AA + Q +SV N + N+++A GVKR
Sbjct: 74 RDKSQVVKAFQGAEVVFHMAAPDSSINNHQLQYSV----NVQGTQNVIDACVDVGVKRLI 129
Query: 139 YASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGI-ECRVG 197
Y SS + F + ++ ES A+P + D+Y K EEL G+ C +
Sbjct: 130 YTSSPSVV--FDGVHGILNGTESMAYPIKHNDSYSATKAEGEELIMKANGRNGLLTCCI- 186
Query: 198 RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFID 247
R +I+GP G R P+ A KF + GDG FT+++
Sbjct: 187 RPSSIFGP-----GDRLLVPSLVAA-ARAGKSKFII-GDGNNLYDFTYVE 229
Score = 64 (27.6 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 12/27 (44%), Positives = 20/27 (74%)
Query: 304 RNSDNTLIKEKLGWAPSMKLKDGLRIT 330
R D+T K++LG+AP + L++G+R T
Sbjct: 328 RTFDSTKAKDRLGYAPVVPLQEGIRRT 354
>UNIPROTKB|Q888H1 [details] [associations]
symbol:udh "Uncharacterized protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE016853 GenomeReviews:AE016853_GR HOGENOM:HOG000129432
OMA:GEDMASF ProtClustDB:CLSK908641 EMBL:EU377538 RefSeq:NP_790889.1
ProteinModelPortal:Q888H1 GeneID:1182687 KEGG:pst:PSPTO_1053
PATRIC:19993323 BioCyc:PSYR223283:GJIX-1075-MONOMER GO:GO:0050388
Uniprot:Q888H1
Length = 275
Score = 140 (54.3 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 49/167 (29%), Positives = 75/167 (44%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
R+ +TGA G + + L+ H + SD + D E + DL D ++
Sbjct: 13 RLLLTGAAGGLGKVLRETLRPYSHILRLSDIAEMAPAVGDH--EEVQVCDLADKDAVHRL 70
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147
+GVD + + GG+ ++ I+ N F++ EA+R GVKR +ASS +
Sbjct: 71 VEGVDAILHF----GGVS-VERPFEEILGANICGVFHIYEAARRHGVKRVIFASSNHVIG 125
Query: 148 EFKQLETNVSLKESDAW-PAEPQDAYGLEKLASEELCKHYTKDFGIE 193
+KQ ET DA P P YGL K E++ Y +GIE
Sbjct: 126 FYKQNET------IDAHSPRRPDSYYGLSKSYGEDMASFYFDRYGIE 166
>UNIPROTKB|O06329 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IGI;IDA] [GO:0019305 "dTDP-rhamnose biosynthetic process"
evidence=IDA] [GO:0040007 "growth" evidence=IDA;IMP] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IGI]
[GO:0070404 "NADH binding" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00124
InterPro:IPR016040 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 EMBL:BX842583 GO:GO:0070404 GO:GO:0045226
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:AYNDARY
PIR:E70566 RefSeq:NP_217981.1 RefSeq:NP_338096.1
RefSeq:YP_006516953.1 HSSP:P95780 ProteinModelPortal:O06329
SMR:O06329 PRIDE:O06329 EnsemblBacteria:EBMYCT00000003518
EnsemblBacteria:EBMYCT00000071206 GeneID:13317071 GeneID:887332
GeneID:926625 KEGG:mtc:MT3570 KEGG:mtu:Rv3464 KEGG:mtv:RVBD_3464
PATRIC:18129579 TubercuList:Rv3464 ProtClustDB:CLSK792508
Uniprot:O06329
Length = 331
Score = 141 (54.7 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 72/321 (22%), Positives = 130/321 (40%)
Query: 27 LRISVTGAGGFIAS---HIARRLKSEGHYII--ASDWKKNEHMTEDMFCHEFHLVDLRVM 81
+R+ VTG GFI + H A R + + A + D+ LV +
Sbjct: 1 MRLLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTYAGRRESLADVE-DAIRLVQGDIT 59
Query: 82 DNCL--KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFY 139
D L ++ D V + AA+ + N ++ N + +F +LEA R GV R +
Sbjct: 60 DAELVSQLVAESDAVVHFAAE-SHVDNALDNPEPFLHTNVIGTFTILEAVRRHGV-RLHH 117
Query: 140 ASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRF 199
S+ +Y + +L+ ES P P Y K ++ L + + + +G+ +
Sbjct: 118 ISTDEVYGDL-ELDDRARFTEST--PYNPSSPYSATKAGADMLVRAWVRSYGVRATISNC 174
Query: 200 HNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR-LTK 258
N YGP+ EK LT + +++G G R + +D+ V R L +
Sbjct: 175 SNNYGPYQHV----EKFIPRQITNVLTGR-RPKLYGAGANVRDWIHVDDHNSAVRRILDR 229
Query: 259 SDFREPVNIGSD-EMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNS-DNTLIKEKLG 316
I S+ E ++ + ++ + H+ G R + D + + ++L
Sbjct: 230 GRIGRTYLISSEGERDNLTVLRTLLRLMDRDPDDFDHVTDRVGHDLRYAIDPSTLYDELC 289
Query: 317 WAPS-MKLKDGLRITYFWIKE 336
WAP ++GLR T W ++
Sbjct: 290 WAPKHTDFEEGLRTTIDWYRD 310
>UNIPROTKB|Q48N10 [details] [associations]
symbol:PSPPH_0937 "Uncharacterized protein" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:CP000058 GenomeReviews:CP000058_GR
RefSeq:YP_273211.1 ProteinModelPortal:Q48N10 STRING:Q48N10
GeneID:3557031 KEGG:psp:PSPPH_0937 PATRIC:19970959
HOGENOM:HOG000129432 OMA:GEDMASF ProtClustDB:CLSK908641
Uniprot:Q48N10
Length = 275
Score = 139 (54.0 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 47/167 (28%), Positives = 77/167 (46%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
R+ +TGA G + + + L+ + + SD + +D E + DL D ++
Sbjct: 13 RLLLTGAAGGLGKVLRKTLRPYANVLRLSDIAEMAPAVDDS--EEVQVCDLADKDAVYRL 70
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147
+GVD + + GG+ ++ I+ N F++ EA+R GVKR +ASS +
Sbjct: 71 IEGVDAIVHF----GGVS-VERPFEEILGANICGVFHIYEAARRHGVKRVIFASSNHVIG 125
Query: 148 EFKQLETNVSLKESDAW-PAEPQDAYGLEKLASEELCKHYTKDFGIE 193
+KQ ET DA P P YGL K E++ Y +GI+
Sbjct: 126 FYKQTET------IDAHSPRRPDSYYGLSKSYGEDMASFYFDRYGIQ 166
>UNIPROTKB|C9JW33 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004 GO:GO:0048040
HGNC:HGNC:17729 IPI:IPI00916527 ProteinModelPortal:C9JW33
SMR:C9JW33 STRING:C9JW33 Ensembl:ENST00000457835
ArrayExpress:C9JW33 Bgee:C9JW33 Uniprot:C9JW33
Length = 190
Score = 131 (51.2 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 45/171 (26%), Positives = 79/171 (46%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 30 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 89
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 90 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 144
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTK 188
++ +Y + V + D W P P+ Y K +E +C Y K
Sbjct: 145 TSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMK 190
>UNIPROTKB|Q83DM2 [details] [associations]
symbol:CBU_0681 "NAD dependent epimerase/dehydratase
family" species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 RefSeq:NP_819711.1
ProteinModelPortal:Q83DM2 GeneID:1208570 KEGG:cbu:CBU_0681
PATRIC:17930045 HOGENOM:HOG000026895 OMA:VSKISHR
ProtClustDB:CLSK914235 BioCyc:CBUR227377:GJ7S-679-MONOMER
Uniprot:Q83DM2
Length = 301
Score = 125 (49.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 50/235 (21%), Positives = 103/235 (43%)
Query: 111 HSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170
++ ++Y N + + E + +++ Y SS +Y + Q T S+ P
Sbjct: 78 NAAMLYRNVRMMNVVCEVLQKQAIQQVIYISSDAVYADSDQPLTETSV-------TAPTS 130
Query: 171 AYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDK 230
+G+ LA E + + + I + R +YG G P F R+ + +
Sbjct: 131 LHGVMHLAREMMLQSVCSENNISLAILRPSLLYGAEDPHNG---YGPNRF-RRLADNHES 186
Query: 231 FEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKL 290
++G+G + R +ID+ E + R+ + R +NI + +++S ++AE V+ + ++
Sbjct: 187 IILFGEGEEQRDHVYIDDVAEIITRVIQRCSRGVLNIATGQVISFKQLAEKVVQLSNNEV 246
Query: 291 PIHHIP--GPEGVRG-RNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEK 342
I P G G R D T ++ ++DGL+ Y +K ++ K++
Sbjct: 247 AIQPSPRQGSMPHNGYRPFDITDCQKAFPDFSYTSIEDGLQ--YSQLKMKVFKKE 299
Score = 53 (23.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 28 RISVTGAGGFIASHIARRLKSE 49
R+ V GA GF+ + +RLK E
Sbjct: 13 RVVVLGANGFVGRALCQRLKQE 34
>TIGR_CMR|CBU_0681 [details] [associations]
symbol:CBU_0681 "conserved hypothetical protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 RefSeq:NP_819711.1
ProteinModelPortal:Q83DM2 GeneID:1208570 KEGG:cbu:CBU_0681
PATRIC:17930045 HOGENOM:HOG000026895 OMA:VSKISHR
ProtClustDB:CLSK914235 BioCyc:CBUR227377:GJ7S-679-MONOMER
Uniprot:Q83DM2
Length = 301
Score = 125 (49.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 50/235 (21%), Positives = 103/235 (43%)
Query: 111 HSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170
++ ++Y N + + E + +++ Y SS +Y + Q T S+ P
Sbjct: 78 NAAMLYRNVRMMNVVCEVLQKQAIQQVIYISSDAVYADSDQPLTETSV-------TAPTS 130
Query: 171 AYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDK 230
+G+ LA E + + + I + R +YG G P F R+ + +
Sbjct: 131 LHGVMHLAREMMLQSVCSENNISLAILRPSLLYGAEDPHNG---YGPNRF-RRLADNHES 186
Query: 231 FEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKL 290
++G+G + R +ID+ E + R+ + R +NI + +++S ++AE V+ + ++
Sbjct: 187 IILFGEGEEQRDHVYIDDVAEIITRVIQRCSRGVLNIATGQVISFKQLAEKVVQLSNNEV 246
Query: 291 PIHHIP--GPEGVRG-RNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEK 342
I P G G R D T ++ ++DGL+ Y +K ++ K++
Sbjct: 247 AIQPSPRQGSMPHNGYRPFDITDCQKAFPDFSYTSIEDGLQ--YSQLKMKVFKKE 299
Score = 53 (23.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 28 RISVTGAGGFIASHIARRLKSE 49
R+ V GA GF+ + +RLK E
Sbjct: 13 RVVVLGANGFVGRALCQRLKQE 34
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 77/328 (23%), Positives = 139/328 (42%)
Query: 27 LRISVTGAGGFIASHIAR-RLKS-EGHYIIASD---WKKNEHMTEDMFCH-EFHLV--DL 78
+ I VTG GFI S+ L+S E + II D + N + + + H ++ V ++
Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60
Query: 79 R---VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI-SFNMLEASRISGV 134
+ ++++ +K + V + N AA+ I++ + Y+ +I + +LE +
Sbjct: 61 QNGELLEHVIK-ERDVQVIVNFAAESHVDRSIEN--PIPFYDTNVIGTVTLLELVKKYPH 117
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
+ S+ +Y + T +E+ P P Y K +++ + Y K + +
Sbjct: 118 IKLVQVSTDEVYGSLGK--TGRFTEET---PLAPNSPYSSSKASADMIALAYYKTYQLPV 172
Query: 195 RVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI-DECVEGV 253
V R N YGP+ EK AL K ++GDGL R + + D C
Sbjct: 173 IVTRCSNNYGPYQY----PEKLIPLMVTNALEGK-KLPLYGDGLNVRDWLHVTDHCSAID 227
Query: 254 LRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDK-KLPIHHIPGPEGVRGRNSDNT-LI 311
+ L K E NIG + + E+ E +++ K K I ++ G R + N +
Sbjct: 228 VVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKM 287
Query: 312 KEKLGWAPSMKLKDGLRITYFWIKEQIE 339
K + W P + GL+ T W ++ E
Sbjct: 288 KNEFDWEPKYTFEQGLQETVQWYEKNEE 315
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 137 (53.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 75/318 (23%), Positives = 129/318 (40%)
Query: 27 LRISVTGAGGFIASHIARR-LKSEGHYIIASDWKKNEHMT-EDMF---CHEFHLVDLRVM 81
++I ++G G+I SH R+ LK++ + + K + ED+ +F DL
Sbjct: 1 MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQKIRAFKFFEQDLSDF 60
Query: 82 D--NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFY 139
L + D + + AA + +Q+ M NNT+ + N++E +GV +F +
Sbjct: 61 QGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYM-NNTVNTTNLIETCLQTGVNKFIF 119
Query: 140 ASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTK---DFGIECRV 196
+S+A Y E +T V S+ P P + YG KL SEE+ + + +F C +
Sbjct: 120 SSTAATYGE---PQTPVV---SETSPLAPINPYGRSKLMSEEVLRDASMANPEFK-HC-I 171
Query: 197 GRFHNIYGPFGTWKGGREKAPAAFCRK-----ALTSTDKFEMWGDGLQTRSFTFIDECVE 251
R+ N+ G + G+ A K A DK ++GD T+ T I + +
Sbjct: 172 LRYFNVAGACMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCIRDFIH 231
Query: 252 ----GVLRLTKSDFREP-----VNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVR 302
L D+ + N+G S+ E+ E + + P G
Sbjct: 232 VDDISSAHLATLDYLQENESNVFNVGYGHGFSVKEVIEAMKKVSGVDFKVELAPRRAGDP 291
Query: 303 G-RNSDNTLIKEKLGWAP 319
SD + I+ W P
Sbjct: 292 SVLISDASKIRNLTSWQP 309
>WB|WBGene00022498 [details] [associations]
symbol:hsd-2 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
HOGENOM:HOG000266975 EMBL:FO081655 PIR:T30003 RefSeq:NP_508851.1
ProteinModelPortal:Q23086 SMR:Q23086 EnsemblMetazoa:ZC8.1
GeneID:191049 KEGG:cel:CELE_ZC8.1 CTD:191049 WormBase:ZC8.1
InParanoid:Q23086 OMA:FERANIT NextBio:947784 Uniprot:Q23086
Length = 374
Score = 134 (52.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 52/183 (28%), Positives = 80/183 (43%)
Query: 31 VTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCL--K 86
+ G GGF+ +H+ L+ G II D E T + + +D+ +
Sbjct: 6 IVGGGGFLGAHVISALQKIGCKERIIVVDPCPQEFKTIKIDKSNISYIKASFLDDKVLEN 65
Query: 87 VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY 146
+ G V +LAA +G G I + + N + +++ + GVKRF YASS +
Sbjct: 66 ILNGASAVVHLAA-VGHTGLIAGDRKSVHNFNVNGTKQLIKQCKALGVKRFLYASSVAVS 124
Query: 147 PEFKQLETNVSLKESDAWPAEPQ---DAYGLEKLASEE-LCKHYTKDFGIECRVGRFHNI 202
+ L+ NV+ E D P +P+ D Y K +E + T DF C RF I
Sbjct: 125 FIGEPLD-NVT--EDDPLP-DPKKYLDFYSASKAEAETYVLSQSTPDFKTVCL--RFRGI 178
Query: 203 YGP 205
YGP
Sbjct: 179 YGP 181
Score = 44 (20.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 212 GREKAPAAF----CRKALTSTDKFEMWGDGLQTRSFTFID 247
GRE A C KA D+ DGL R++ +D
Sbjct: 207 GRESVSCASSGVNCAKAFALADQMLQNPDGLHGRAYYILD 246
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 136 (52.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 69/318 (21%), Positives = 133/318 (41%)
Query: 28 RISVTGAGGFIASH-IARRLKS--EGHY--IIASDWKKNEHMTEDMFCHE-FHLVDLRVM 81
RI V+G GFI H + +K H+ I ++ N E++ F V L +
Sbjct: 8 RIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSNFEFVHLDLS 67
Query: 82 DNC---LKVTKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEASRIS-GVKR 136
DN LK+TK + N AA+ F + NN + + N+LE R++ +
Sbjct: 68 DNLEYLLKITKNTTDIINFAAESSVDRSF--KDPVYFTKNNILATQNLLECHRLNPSIGY 125
Query: 137 FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRV 196
F + S+ +Y + + + KE+ P + Y K A + + K Y + + +
Sbjct: 126 FLHISTDEVYGDVYEGDN----KENAVM--NPTNPYSASKAAIDLIIKSYQYSYKLPITI 179
Query: 197 GRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV--- 253
R +N+YGP + + P + + + G G R + ++ + V +
Sbjct: 180 LRPNNVYGPL---QYPEKIIPLTI--QCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETV 234
Query: 254 -LRLTKSDFREPVNIG-SDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLI 311
++ + + NIG +DE+ +++ + ++++ + I I S +T
Sbjct: 235 WIKNPMTTVNQIYNIGGTDELDNLS-LIKLIMEIFGRG-EIQFIKDRNYNDTNYSIDTTK 292
Query: 312 KEKLGWAPSMKLKDGLRI 329
LGW+P + L GL++
Sbjct: 293 IHNLGWSPKISLVQGLQL 310
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 136 (52.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 69/318 (21%), Positives = 133/318 (41%)
Query: 28 RISVTGAGGFIASH-IARRLKS--EGHY--IIASDWKKNEHMTEDMFCHE-FHLVDLRVM 81
RI V+G GFI H + +K H+ I ++ N E++ F V L +
Sbjct: 8 RIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSNFEFVHLDLS 67
Query: 82 DNC---LKVTKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEASRIS-GVKR 136
DN LK+TK + N AA+ F + NN + + N+LE R++ +
Sbjct: 68 DNLEYLLKITKNTTDIINFAAESSVDRSF--KDPVYFTKNNILATQNLLECHRLNPSIGY 125
Query: 137 FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRV 196
F + S+ +Y + + + KE+ P + Y K A + + K Y + + +
Sbjct: 126 FLHISTDEVYGDVYEGDN----KENAVM--NPTNPYSASKAAIDLIIKSYQYSYKLPITI 179
Query: 197 GRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV--- 253
R +N+YGP + + P + + + G G R + ++ + V +
Sbjct: 180 LRPNNVYGPL---QYPEKIIPLTI--QCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETV 234
Query: 254 -LRLTKSDFREPVNIG-SDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLI 311
++ + + NIG +DE+ +++ + ++++ + I I S +T
Sbjct: 235 WIKNPMTTVNQIYNIGGTDELDNLS-LIKLIMEIFGRG-EIQFIKDRNYNDTNYSIDTTK 292
Query: 312 KEKLGWAPSMKLKDGLRI 329
LGW+P + L GL++
Sbjct: 293 IHNLGWSPKISLVQGLQL 310
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 136 (52.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 73/285 (25%), Positives = 123/285 (43%)
Query: 75 LVDLRVMDNCLKVTKGVDHVFNLAADM-------GGMGFIQSNHSVIMYNNTMISFNM-- 125
+ DL V++N + + D V +LAA+ G F+Q+N V Y ++ N
Sbjct: 60 ICDLNVIENIFEKYQP-DAVMHLAAESHVDRSISGAADFVQTN-IVGTYTLLEVAKNYWH 117
Query: 126 -LEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184
L+ ++ + RF + S+ +Y + E + ++S P P Y K AS L +
Sbjct: 118 TLDEAKKTTF-RFHHISTDEVYGDLSLSEPAFT-EQS---PYHPSSPYSASKAASNHLVQ 172
Query: 185 HYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 244
+ + +G+ + N YG + EK A+ ++GDG Q R +
Sbjct: 173 AWHRTYGLPVIITNSSNNYGAYQH----AEKLIPLMISNAVMGKP-LPIYGDGQQIRDWL 227
Query: 245 FIDECVEG-VLRLTKSDFREPVNIGSD------EMVS-----MNEMAEI----VLSFEDK 288
F+++ V+ L LTK E NIG + E+V + E+A + +ED
Sbjct: 228 FVEDHVQASYLVLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEELAPSKPNHIKYYEDL 287
Query: 289 KLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 333
+ PG + VR + D + I +LGW P + + GLR T W
Sbjct: 288 MTFVKDRPGHD-VR-YSLDCSKIHAELGWQPQITFEQGLRQTVKW 330
Score = 113 (44.8 bits), Expect = 0.00095, P = 0.00095
Identities = 65/283 (22%), Positives = 119/283 (42%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGH-YIIASD---WKKNEHMTEDM-----FCHE-FHLV 76
+ I VTG GFI S + R + + ++I D + N+ ++ + E +
Sbjct: 2 MNILVTGGSGFIGSALIRYIINHTQDFVINIDKLTYAANQSALREVENNPRYVFEKVDIC 61
Query: 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKR 136
DL V++N + + D V +LAA+ I S + + N + ++ +LE + K
Sbjct: 62 DLNVIENIFEKYQP-DAVMHLAAESHVDRSI-SGAADFVQTNIVGTYTLLEVA-----KN 114
Query: 137 FFYASSACIYPEFK--QLETN-----VSLKE---SDAWPAEPQDAYGLEKLASEELCKHY 186
+++ F+ + T+ +SL E ++ P P Y K AS L + +
Sbjct: 115 YWHTLDEAKKTTFRFHHISTDEVYGDLSLSEPAFTEQSPYHPSSPYSASKAASNHLVQAW 174
Query: 187 TKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 246
+ +G+ + N YG + EK A+ ++GDG Q R + F+
Sbjct: 175 HRTYGLPVIITNSSNNYGAYQH----AEKLIPLMISNAVMGKP-LPIYGDGQQIRDWLFV 229
Query: 247 DECVEG-VLRLTKSDFREPVNIGSD-EMVSMNEMAEIVLSFED 287
++ V+ L LTK E NIG + E ++ + I E+
Sbjct: 230 EDHVQASYLVLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEE 272
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 136 (52.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 80/345 (23%), Positives = 138/345 (40%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIAS-D---WKKNEHMTEDMFCHE-FHLVDLRVM 81
+RI VTG GFI S + R L + ++ + D + + + +E +H V +
Sbjct: 1 MRILVTGGAGFIGSALVRMLIEQTESVVLNFDKLTYASHPESLAGVADNERYHFVQADIC 60
Query: 82 DNCL--KVTKGV--DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRI------ 131
D +V + D + +LAA+ I I N + ++ +LEA R
Sbjct: 61 DRARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQ-TNIVGTYTLLEACRSYYQTLG 119
Query: 132 SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFG 191
+R F F L E+ A+ +P Y K +++ L + + + +
Sbjct: 120 QAQQRRFRLHHISTDEVFGSLTETGLFSETSAY--DPSSPYSASKASADHLVRAWHRTYA 177
Query: 192 IECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVE 251
+ + N YGPF EK AL S ++G+G Q R + ++D+ V+
Sbjct: 178 LPIVITNCSNNYGPFQY----PEKLIPLMVSNALQSKP-LPIYGNGQQVRDWLYVDDHVK 232
Query: 252 GV-LRLTKSDFREPVNIG-SDEMVSMNEMAEIVLSFEDKKLPIH---------------- 293
+ L T+ + NIG S E ++ + I S ++ +P H
Sbjct: 233 ALYLVATQGQLGQTYNIGGSCEQTNLTVVRHIC-SLLEELVPTHPQSLAMGNAGFADLIQ 291
Query: 294 HIPGPEGVRGRNS-DNTLIKEKLGWAPSMKLKDGLRITYFWIKEQ 337
++ G R + D + I+ +LGW P + GLR T WI Q
Sbjct: 292 YVVDRPGHDVRYAIDASKIQRELGWRPQESFESGLRKTVEWIINQ 336
>ZFIN|ZDB-GENE-050417-317 [details] [associations]
symbol:zgc:110348 "zgc:110348" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 ZFIN:ZDB-GENE-050417-317
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168011 GeneTree:ENSGT00390000004681
HOVERGEN:HBG000059 OMA:KNTHINI EMBL:BX663521 IPI:IPI00851573
Ensembl:ENSDART00000100262 Uniprot:B0S7C9
Length = 354
Score = 135 (52.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 59/269 (21%), Positives = 112/269 (41%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNC 84
E +R+ VTG G + I R +K EG +W ++ + + R +
Sbjct: 40 EPMRVLVTGGSGLVGRAIERVVKEEGRG--GEEWTFLSSKEANLLSAK----ETRAIFEK 93
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMY-NNTMISFNMLEASRISGVKRFFYASSA 143
+ T HV +LAA +GG+ F ++ + NN I+ N+L+ + GV + S
Sbjct: 94 YRPT----HVIHLAAMVGGL-FRNMRQNLDFWRNNVFINDNVLQTANEFGVVKVVSCLST 148
Query: 144 CIYPEFKQLETNVSLKESDAWPAEPQDA---YGLEKLASEELCKHYTKDFGIECRVGRFH 200
CI+P+ +T + E+ P D+ Y K + + K +G G
Sbjct: 149 CIFPD----KTTYPIDETMIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTAGILT 204
Query: 201 NIYGPFGTWK-GGREKAPAAFCRKALTSTD--KFEMWGDGLQTRSFTF-IDECVEGVLRL 256
N++G + P + L + ++WG G R F + +D + L
Sbjct: 205 NVFGAHDNFNIEDGHVLPGLIHKTYLAKKEGKPLQVWGSGKPLRQFIYSLDLARLFLWVL 264
Query: 257 TKSDFREPV--NIGSDEMVSMNEMAEIVL 283
+ D +P+ ++G ++ +S+ + A+ V+
Sbjct: 265 REYDEVDPIILSVGEEDELSIKDCADAVV 293
>DICTYBASE|DDB_G0281487 [details] [associations]
symbol:DDB_G0281487 "3-beta-hydroxysteroid
dehydrogenase" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 dictyBase:DDB_G0281487 eggNOG:COG0451
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AAFI02000041 KO:K07748 RefSeq:XP_640712.1
ProteinModelPortal:Q54TU9 STRING:Q54TU9 PRIDE:Q54TU9
EnsemblProtists:DDB0233059 GeneID:8623099 KEGG:ddi:DDB_G0281487
InParanoid:Q54TU9 OMA:HIVWGPG ProtClustDB:CLSZ2729041
Uniprot:Q54TU9
Length = 349
Score = 126 (49.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 65/251 (25%), Positives = 110/251 (43%)
Query: 31 VTGAGGFIASHIARRLKSEGHYII-ASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK 89
V G GF+ +I L + G + D +K+ +D FH+ D+R ++ K
Sbjct: 7 VVGGCGFLGRYIVESLLARGEKNVHVFDIRKS--FEDDRVT--FHIGDIRKTEDLESACK 62
Query: 90 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEF 149
G+ VF+ A+ GMG+ +SV N + + ++EA GVK+ Y SS+ +
Sbjct: 63 GITTVFHTASPTHGMGY-DIYYSV----NVIGTERLIEACIKCGVKQLVYTSSSSVVFNG 117
Query: 150 KQLETNVSLKESDAWPAEPQDAYGLEK-LASEELCKHYTKDFGIECRVGRFHNIYGPFGT 208
K + V+ E+ + + D Y K L + K + + C + R I+GP
Sbjct: 118 KDI---VNGDETLPYVDKHIDPYNKTKELGERAVLKAKGSNL-LVCAL-RPAGIFGP--- 169
Query: 209 WKGGRE-KAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG-VLRLTKSDFREPVN 266
RE + F + A +KF M+GDG +T+ID V +L P++
Sbjct: 170 ----REVQGWPQFLKAAKEGKNKF-MFGDGNNLCDWTYIDNVVHAHILAADNMTTNSPIS 224
Query: 267 IGSDEMVSMNE 277
GS ++ +E
Sbjct: 225 -GSVYFITNDE 234
Score = 49 (22.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 312 KEKLGWAPSMKLKDGLRITYFWIKEQ 337
K++L + P + L+DG+ T W +Q
Sbjct: 307 KKELKYKPIVSLRDGMEKTKEWFLQQ 332
>TIGR_CMR|BA_3248 [details] [associations]
symbol:BA_3248 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:198094 "Bacillus
anthracis str. Ames" [GO:0006694 "steroid biosynthetic process"
evidence=ISS] [GO:0030283 "testosterone dehydrogenase [NAD(P)]
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 HOGENOM:HOG000167989 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016853 GO:GO:0044237 OMA:ERFGNKS
RefSeq:NP_845549.1 RefSeq:YP_019886.1 RefSeq:YP_029273.1
ProteinModelPortal:Q81NF3 DNASU:1084046
EnsemblBacteria:EBBACT00000013025 EnsemblBacteria:EBBACT00000016605
EnsemblBacteria:EBBACT00000023035 GeneID:1084046 GeneID:2820109
GeneID:2852271 KEGG:ban:BA_3248 KEGG:bar:GBAA_3248 KEGG:bat:BAS3016
ProtClustDB:CLSK918137 BioCyc:BANT260799:GJAJ-3078-MONOMER
BioCyc:BANT261594:GJ7F-3182-MONOMER Uniprot:Q81NF3
Length = 328
Score = 119 (46.9 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 62/271 (22%), Positives = 113/271 (41%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
+++ VTG GF+ +A RLK+ G+ + A+ K + +F L + L+
Sbjct: 1 MKMLVTGGTGFLGQKLAFRLKNMGYEVTATGRNKTIGKVLEQNGIKFVHCPLEDRERVLQ 60
Query: 87 VTKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYASSACI 145
V K D++F+ A G + YN N + + +++E S+ G+KR + S+ I
Sbjct: 61 VCKDKDYIFHSGAHSSPWGKYED-----FYNANVLGTKHIIEGSQKYGIKRLIHVSTPSI 115
Query: 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
Y + + + V E+ P + Y K +E+ G+ R ++GP
Sbjct: 116 YFYYDERQNVV---ENAKLPDTFVNHYATTKYMAEQAIDQAFAH-GLPVITIRPRALFGP 171
Query: 206 FGTWKGGREKAPAAF--CRK-ALTSTDKFEMWGDGLQTRSFTFIDECVEGVL---RLTKS 259
G P C K AL + D T+++ V+ +L K
Sbjct: 172 -----GDNAILPRLIKVCEKGALPRIGTENVLVD------ITYVENVVDALLLCMHSPKH 220
Query: 260 DFREPVNIGSDEMVSMNEMAEIVLSFEDKKL 290
+ NI +DE +++ E+ E V+ DK++
Sbjct: 221 TLGQKYNITNDERINLYEVIENVMKRLDKEV 251
Score = 55 (24.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 312 KEKLGWAPSMKLKDGLRITYFWIKEQ 337
KE+LG+AP + +++G+ W K Q
Sbjct: 303 KEELGYAPKVSIEEGITKFVDWWKTQ 328
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 121 (47.7 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 54/214 (25%), Positives = 87/214 (40%)
Query: 125 MLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184
+L+A+ + RF + S+ +Y ++T ++ P P Y K S+ L
Sbjct: 111 LLDAALRHHIGRFLHVSTDEVYGS---IDTG---SWAEGHPLAPNSPYAASKAGSDLLAL 164
Query: 185 HYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 244
Y + G++ V R N YGP + EK F + L D ++GDG R +
Sbjct: 165 AYHQTHGMDVVVTRCSNNYGP----RQFPEKMIPLFVTRLLDGLD-VPVYGDGRNIRDWL 219
Query: 245 FI-DECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLP-IHHIPGPEGVR 302
+ D C L L E +IG + E+ EI+L I + +G
Sbjct: 220 HVSDHCRGLALALGAGRAGEVYHIGGGWEATNLELTEILLEACGAPASRISFVTDRKGHD 279
Query: 303 GRNS-DNTLIKEKLGWAPSMKLKDGLRITYFWIK 335
R S D + I +LG+ P + DG+ T W +
Sbjct: 280 RRYSLDYSKIAGELGYRPRVDFTDGIAETVAWYR 313
Score = 52 (23.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 27 LRISVTGAGGFIASHIARRLKS 48
++I VTG GFI SH L S
Sbjct: 1 MKILVTGGAGFIGSHFVTSLIS 22
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 133 (51.9 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 69/327 (21%), Positives = 136/327 (41%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT 88
I VTG G+I SHI R+L + ++ D H + + D + L++
Sbjct: 2 ILVTGGAGYIGSHIVRQLCLKNEKVLVVDNLSKGHKKAVDTRAKLIVGDFGDENLLLEIF 61
Query: 89 KGVD--HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY 146
K D V ++AA +G S N + ++L+ + VK+ ++S+A +Y
Sbjct: 62 KKYDIKAVIHMAAQ-SLVGESMSQPEKYFEENISKTLSLLKVMLKANVKKMVFSSTAAVY 120
Query: 147 PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPF 206
E ++ ++ +P +P + YG KL E+ + Y + G R+ N G
Sbjct: 121 GEPEKWPI------TEDFPQKPTNVYGYSKLVIEQCLEWYRQIHGFNYVSLRYFNAAGAD 174
Query: 207 GTWKGGREKAPAAFC-----RKALTSTDKFEMWG------DGLQTRSFTFIDECVEG-VL 254
+ G + P + L ++ ++G DG R + +++ E +L
Sbjct: 175 PSGDIGEDHNPETHLIPLIFKVILGEQEELTVFGTDYPTPDGTCIRDYIHVNDLAEAHIL 234
Query: 255 RLTKSDFREP--VNIGSDEMVSMNEMAEIVLSFEDKKLPIHH---IPGPEGVRGRNSDNT 309
L K + E N+G+ + S+ E+ ++ K+ + + PG V +S+
Sbjct: 235 ALNKLNKDESGVYNLGNQKGFSVKEIIKVAEEVTGVKVKVRYGQRRPGDPAVLVASSEK- 293
Query: 310 LIKEKLGWAPSM-KLKDGLRITYFWIK 335
I+++L + P +K ++ + W K
Sbjct: 294 -IQKELNFTPKFGDIKTIVQTAWEWHK 319
>UNIPROTKB|Q9HTB6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:208964
"Pseudomonas aeruginosa PAO1" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 PseudoCAP:PA5454
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE004091 GenomeReviews:AE004091_GR GO:GO:0033705 EMBL:AF009955
PIR:H82964 RefSeq:NP_254141.1 HSSP:P27830 ProteinModelPortal:Q9HTB6
SMR:Q9HTB6 GeneID:883037 KEGG:pae:PA5454 PATRIC:19845791
HOGENOM:HOG000167992 OMA:NLLEACA ProtClustDB:CLSK869364
Uniprot:Q9HTB6
Length = 304
Score = 127 (49.8 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 63/234 (26%), Positives = 101/234 (43%)
Query: 118 NTMISFNMLEASRISGVK-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEK 176
N + + N+L+A + G F Y SS +Y + E + + E + P P++ Y + K
Sbjct: 80 NLLGTLNLLQALKARGFSGTFLYISSGDVYGQVA--EAALPIHE-ELIP-HPRNPYAVSK 135
Query: 177 LASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAA--FCR-KALTSTDKFEM 233
LA+E LC + G V R N GP G K A AA R K ++ E+
Sbjct: 136 LAAESLCLQWGITEGWRVLVARPFNHIGP-GQ-KDSFVIASAARQIARMKQGLQANRLEV 193
Query: 234 WGDGLQTRSFTFIDECVEGVLRLTKSDFREPV-NIGSDEMVSMNEMAEIVLSFEDKKLPI 292
GD +R F + + + LRL V N+ S + + E+ E++ +L I
Sbjct: 194 -GDIDVSRDFLDVQDVLSAYLRLLSHGEAGAVYNVCSGQEQKIRELIELLADIAQVELEI 252
Query: 293 HHIPG----PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLR-ITYFWIKEQIEKE 341
P E R R S + + + GW P + +K LR I W + ++ +E
Sbjct: 253 VQDPARMRRAEQRRVRGS-HARLHDTTGWKPEITIKQSLRAILSDW-ESRVREE 304
Score = 44 (20.5 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 28 RISVTGAGGFIASHI 42
R+ VTG GF+ H+
Sbjct: 4 RLFVTGLSGFVGKHL 18
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 133 (51.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 84/341 (24%), Positives = 140/341 (41%)
Query: 26 KLRISVTGAGGFIASHIARRL-KSEGHYIIASD---WKKN-EHMTE--DMFCHEFHLVDL 78
K I VTG GFI S + R + ++ ++ D + N E +T+ D + F VD+
Sbjct: 6 KKNILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDI 65
Query: 79 --RV-MDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASR----- 130
R +D + D V +LAA+ I S I N + +F++LEA+R
Sbjct: 66 CDRAELDRVFAQYRP-DAVMHLAAESHVDRAIGSAGEFIR-TNIVGTFDLLEAARAYWQQ 123
Query: 131 ISGVKR----FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHY 186
+ KR F + S+ +Y + T+ E+ P P Y K A++ L + +
Sbjct: 124 MPSEKREAFRFHHISTDEVYGDLHG--TDDLFTETT--PYAPSSPYSASKAAADHLVRAW 179
Query: 187 TKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 246
+ + + V N YGP + EK AL S ++GDG Q R + F+
Sbjct: 180 QRTYRLPSIVSNCSNNYGP----RQFPEKLIPLMILNAL-SGKPLPVYGDGAQIRDWLFV 234
Query: 247 DECVEGVLRL-TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLP------------IH 293
++ + ++ T+ E NIG + E+ + + + ++ P I
Sbjct: 235 EDHARALYQVVTEGVVGETYNIGGHNEKTNLEVVKTICALLEELAPEKPAGVARYEDLIT 294
Query: 294 HIPGPEGVRGRNS-DNTLIKEKLGWAPSMKLKDGLRITYFW 333
+ G R + D I+ LGW P + GLR T W
Sbjct: 295 FVQDRPGHDARYAVDAAKIRRDLGWLPLETFESGLRKTVQW 335
>CGD|CAL0000448 [details] [associations]
symbol:GAL10 species:5476 "Candida albicans" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0019388
"galactose catabolic process" evidence=IEP;IGI;IMP] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IMP]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042149 "cellular response to glucose starvation" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0060257 "negative regulation of
flocculation" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IEA] [GO:0042125 "protein galactosylation"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000448
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0034599
GO:GO:0030246 GO:GO:0042149 GO:GO:0009272 GO:GO:0044237
SUPFAM:SSF74650 GO:GO:0001403 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AACQ01000118 EMBL:AACQ01000119 Gene3D:2.70.98.10 GO:GO:0019388
GO:GO:0060257 GO:GO:1900429 eggNOG:COG2017 KO:K15917
RefSeq:XP_713732.1 RefSeq:XP_713766.1 ProteinModelPortal:Q59VY6
SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583 GeneID:3644609
KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672 Uniprot:Q59VY6
Length = 675
Score = 139 (54.0 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 52/196 (26%), Positives = 86/196 (43%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKN---EHMTEDMFCHEFHL----VDLRVM 81
I VTG G+I SH L S G+ ++ D N + + F + H+ VD+R
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAVARIEFIVKQHVPFYDVDIRNY 65
Query: 82 DNCLKVTKG--VDHVFNLAADMGGMGFIQSNHSVIMY--NNTMISFNMLEASRISGVKRF 137
+ KV + + V + AA + +G +S + Y NN + N+LE + + VK
Sbjct: 66 EQLNKVFQDYKISGVIHFAA-LKAVG--ESTKIPLAYYDNNVSGTVNLLEVCKANDVKTI 122
Query: 138 FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKH-YTKDFGIECRV 196
++SSA +Y + + N + + P +P + YG K E + K Y D + +
Sbjct: 123 VFSSSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWKVAI 182
Query: 197 GRFHNIYGPFGTWKGG 212
R+ N P G G
Sbjct: 183 LRYFN---PIGAHPSG 195
Score = 41 (19.5 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 350 VYGS-SKVVGTQAPVQLGSLRAAD 372
VY + SKVVG + P ++ RA D
Sbjct: 283 VYHAFSKVVGRELPHEVVGRRAGD 306
>UNIPROTKB|Q59VY6 [details] [associations]
symbol:GAL10 "Putative uncharacterized protein GAL10"
species:237561 "Candida albicans SC5314" [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0019388
"galactose catabolic process" evidence=IGI;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0034599 "cellular response
to oxidative stress" evidence=IMP] [GO:0042149 "cellular response
to glucose starvation" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0060257 "negative regulation of flocculation" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008183
InterPro:IPR011013 InterPro:IPR014718 Pfam:PF01263 Pfam:PF01370
InterPro:IPR016040 CGD:CAL0000448 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0034599 GO:GO:0030246 GO:GO:0042149
GO:GO:0009272 GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0001403
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AACQ01000118 EMBL:AACQ01000119
Gene3D:2.70.98.10 GO:GO:0019388 GO:GO:0060257 GO:GO:1900429
eggNOG:COG2017 KO:K15917 RefSeq:XP_713732.1 RefSeq:XP_713766.1
ProteinModelPortal:Q59VY6 SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583
GeneID:3644609 KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672
Uniprot:Q59VY6
Length = 675
Score = 139 (54.0 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 52/196 (26%), Positives = 86/196 (43%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKN---EHMTEDMFCHEFHL----VDLRVM 81
I VTG G+I SH L S G+ ++ D N + + F + H+ VD+R
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAVARIEFIVKQHVPFYDVDIRNY 65
Query: 82 DNCLKVTKG--VDHVFNLAADMGGMGFIQSNHSVIMY--NNTMISFNMLEASRISGVKRF 137
+ KV + + V + AA + +G +S + Y NN + N+LE + + VK
Sbjct: 66 EQLNKVFQDYKISGVIHFAA-LKAVG--ESTKIPLAYYDNNVSGTVNLLEVCKANDVKTI 122
Query: 138 FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKH-YTKDFGIECRV 196
++SSA +Y + + N + + P +P + YG K E + K Y D + +
Sbjct: 123 VFSSSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWKVAI 182
Query: 197 GRFHNIYGPFGTWKGG 212
R+ N P G G
Sbjct: 183 LRYFN---PIGAHPSG 195
Score = 41 (19.5 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 350 VYGS-SKVVGTQAPVQLGSLRAAD 372
VY + SKVVG + P ++ RA D
Sbjct: 283 VYHAFSKVVGRELPHEVVGRRAGD 306
>GENEDB_PFALCIPARUM|PF10_0137 [details] [associations]
symbol:PF10_0137 "GDP-fucose synthase,
putative" species:5833 "Plasmodium falciparum" [GO:0016491
"oxidoreductase activity" evidence=ISS] [GO:0016857 "racemase and
epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=ISS]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0016491 GO:GO:0006486
EMBL:AE014185 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:CLSZ2431446 GO:GO:0016857 RefSeq:XP_001347422.1
ProteinModelPortal:Q8IJQ5 GeneID:810295 KEGG:pfa:PF10_0137
EuPathDB:PlasmoDB:PF3D7_1014000 OMA:IRETCEW Uniprot:Q8IJQ5
Length = 329
Score = 132 (51.5 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 55/232 (23%), Positives = 98/232 (42%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASDWK----KNEH---MTEDMFCHEFHLVDLRVMDN 83
VTG G + S + +K+E II + + NE+ +T+ +F + DL+ D
Sbjct: 7 VTGGTGLLGSSLREVIKNENKNIIEKENEIIVNSNENKNIITKYIFLSS-EMCDLKDYDK 65
Query: 84 CLKVTKGVDH--VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
V + + + + AA +GG+ ++N+ + NN IS N+++ + R +
Sbjct: 66 SKLVFEKYNFTDIIHFAAHVGGLYANKNNNLDFLINNLEISMNVIKLCHKYSISRGIFTL 125
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE--CRVGRF 199
S CI+P L K D + + Y + K E L + Y + + E C +
Sbjct: 126 STCIFPVNCSLPLTEE-KIHDGKCHQSNEGYSVSKRVLEVLVRFYREKYNYEWICIIPT- 183
Query: 200 HNIYGPFGTWK-GGREKAPAAFCRKALTSTDKFEMW--GDGLQTRSFTF-ID 247
NIYG + + P+ + L + ++ GDG R F + ID
Sbjct: 184 -NIYGKYDNFNLENAHVIPSIIHKMYLAKVNNTNVYLLGDGSAVRQFIYNID 234
>UNIPROTKB|Q8IJQ5 [details] [associations]
symbol:PF10_0137 "GDP-fucose synthase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0006486 "protein
glycosylation" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0016491
GO:GO:0006486 EMBL:AE014185 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:CLSZ2431446 GO:GO:0016857 RefSeq:XP_001347422.1
ProteinModelPortal:Q8IJQ5 GeneID:810295 KEGG:pfa:PF10_0137
EuPathDB:PlasmoDB:PF3D7_1014000 OMA:IRETCEW Uniprot:Q8IJQ5
Length = 329
Score = 132 (51.5 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 55/232 (23%), Positives = 98/232 (42%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASDWK----KNEH---MTEDMFCHEFHLVDLRVMDN 83
VTG G + S + +K+E II + + NE+ +T+ +F + DL+ D
Sbjct: 7 VTGGTGLLGSSLREVIKNENKNIIEKENEIIVNSNENKNIITKYIFLSS-EMCDLKDYDK 65
Query: 84 CLKVTKGVDH--VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
V + + + + AA +GG+ ++N+ + NN IS N+++ + R +
Sbjct: 66 SKLVFEKYNFTDIIHFAAHVGGLYANKNNNLDFLINNLEISMNVIKLCHKYSISRGIFTL 125
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE--CRVGRF 199
S CI+P L K D + + Y + K E L + Y + + E C +
Sbjct: 126 STCIFPVNCSLPLTEE-KIHDGKCHQSNEGYSVSKRVLEVLVRFYREKYNYEWICIIPT- 183
Query: 200 HNIYGPFGTWK-GGREKAPAAFCRKALTSTDKFEMW--GDGLQTRSFTF-ID 247
NIYG + + P+ + L + ++ GDG R F + ID
Sbjct: 184 -NIYGKYDNFNLENAHVIPSIIHKMYLAKVNNTNVYLLGDGSAVRQFIYNID 234
>UNIPROTKB|Q9KV94 [details] [associations]
symbol:VC_0262 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0044237
GO:GO:0003978 GO:GO:0006012 HOGENOM:HOG000167991 OMA:RRFVFIS
PIR:D82345 RefSeq:NP_229918.1 ProteinModelPortal:Q9KV94
DNASU:2614880 GeneID:2614880 KEGG:vch:VC0262 PATRIC:20079564
ProtClustDB:CLSK793549 Uniprot:Q9KV94
Length = 323
Score = 131 (51.2 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 46/180 (25%), Positives = 85/180 (47%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
L+I VTGA GF+ + + ++ G+ ++A + + E + L+D+ + +
Sbjct: 9 LKILVTGASGFVGLRVLTQAQNIGYALVAQSRSQQPYSFEQV------LLDITPNTDWER 62
Query: 87 VTKGVDHVFNLAADMGGMGFIQSNHSVIMYN--NTMISFNMLEASRISGVKRFFYASSAC 144
GVD V + AA + M +++ ++ Y NT + N+ + + +GVKRF + SS
Sbjct: 63 ALVGVDCVVHCAARVHQMQETEAD-ALKAYRDVNTQGTLNLAKQAVSAGVKRFIFLSSIK 121
Query: 145 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG 204
+ E Q + + + D P D YGL K +E+ + G+E + R +YG
Sbjct: 122 VNGE--QTKAGSAFQHDDQHI--PSDPYGLSKYEAEQQLLELAAETGLEVVIIRPPLVYG 177
>TIGR_CMR|VC_0262 [details] [associations]
symbol:VC_0262 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 HOGENOM:HOG000167991 OMA:RRFVFIS PIR:D82345
RefSeq:NP_229918.1 ProteinModelPortal:Q9KV94 DNASU:2614880
GeneID:2614880 KEGG:vch:VC0262 PATRIC:20079564
ProtClustDB:CLSK793549 Uniprot:Q9KV94
Length = 323
Score = 131 (51.2 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 46/180 (25%), Positives = 85/180 (47%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
L+I VTGA GF+ + + ++ G+ ++A + + E + L+D+ + +
Sbjct: 9 LKILVTGASGFVGLRVLTQAQNIGYALVAQSRSQQPYSFEQV------LLDITPNTDWER 62
Query: 87 VTKGVDHVFNLAADMGGMGFIQSNHSVIMYN--NTMISFNMLEASRISGVKRFFYASSAC 144
GVD V + AA + M +++ ++ Y NT + N+ + + +GVKRF + SS
Sbjct: 63 ALVGVDCVVHCAARVHQMQETEAD-ALKAYRDVNTQGTLNLAKQAVSAGVKRFIFLSSIK 121
Query: 145 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG 204
+ E Q + + + D P D YGL K +E+ + G+E + R +YG
Sbjct: 122 VNGE--QTKAGSAFQHDDQHI--PSDPYGLSKYEAEQQLLELAAETGLEVVIIRPPLVYG 177
>UNIPROTKB|P67910 [details] [associations]
symbol:rfaD "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:83333 "Escherichia coli K-12" [GO:0097171
"ADP-L-glycero-beta-D-manno-heptose biosynthetic process"
evidence=IEA] [GO:0070401 "NADP+ binding" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008712 "ADP-glyceromanno-heptose
6-epimerase activity" evidence=IEA;IDA] [GO:0009244
"lipopolysaccharide core region biosynthetic process"
evidence=IEA;IMP] UniPathway:UPA00356 HAMAP:MF_01601
InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 GO:GO:0005829 GO:GO:0006950
GO:GO:0016020 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:U00039
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009244 GO:GO:0070401 GO:GO:0097171
EMBL:M33577 EMBL:X54492 PIR:JU0299 RefSeq:NP_418076.1
RefSeq:YP_491814.1 PDB:1EQ2 PDB:2X6T PDBsum:1EQ2 PDBsum:2X6T
ProteinModelPortal:P67910 SMR:P67910 DIP:DIP-35958N IntAct:P67910
SWISS-2DPAGE:P67910 PaxDb:P67910 PRIDE:P67910
EnsemblBacteria:EBESCT00000000716 EnsemblBacteria:EBESCT00000000717
EnsemblBacteria:EBESCT00000000718 EnsemblBacteria:EBESCT00000000719
EnsemblBacteria:EBESCT00000016472 GeneID:12934299 GeneID:948134
KEGG:ecj:Y75_p3555 KEGG:eco:b3619 PATRIC:32122725 EchoBASE:EB0831
EcoGene:EG10838 HOGENOM:HOG000167987 KO:K03274 OMA:AVNLWFW
ProtClustDB:PRK11150 BioCyc:EcoCyc:EG10838-MONOMER
BioCyc:ECOL316407:JW3594-MONOMER BioCyc:MetaCyc:EG10838-MONOMER
SABIO-RK:P67910 EvolutionaryTrace:P67910 Genevestigator:P67910
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
Uniprot:P67910
Length = 310
Score = 130 (50.8 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 68/286 (23%), Positives = 122/286 (42%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHY-IIASDWKKNEHMTEDMFCHEFHLVD-LRVMDNCLK 86
I VTG GFI S+I + L +G I+ D K+ T+ + + ++ D + D ++
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG--TKFVNLVDLNIADYMDKEDFLIQ 59
Query: 87 VTKG-----VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ G V+ +F+ A + + +M NN S +L + F YAS
Sbjct: 60 IMAGEEFGDVEAIFHEGACSSTTEW---DGKYMMDNNYQYSKELLHYCLEREIP-FLYAS 115
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG-RFH 200
SA Y + + +E + +P + YG K +E + + + VG R+
Sbjct: 116 SAATYGG--RTSDFIESREYE----KPLNVYGYSKFLFDEYVRQILPEANSQI-VGFRYF 168
Query: 201 NIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQT--RSFTFIDECVEGVLRLTK 258
N+YGP KG A AF + + +G + R F ++ + + L +
Sbjct: 169 NVYGPREGHKGSM--ASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLE 226
Query: 259 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGR 304
+ N+G+ S +A+ L++ KK I +IP P+ ++GR
Sbjct: 227 NGVSGIFNLGTGRAESFQAVADATLAYH-KKGQIEYIPFPDKLKGR 271
>TIGR_CMR|CBU_0676 [details] [associations]
symbol:CBU_0676 "NAD dependent epimerase/dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GenomeReviews:AE016828_GR GO:GO:0044237 EMBL:AF387640
ProteinModelPortal:Q93N67 PRIDE:Q93N67 PATRIC:17930035
HOGENOM:HOG000168002 ProtClustDB:CLSK905415
BioCyc:CBUR227377:GJ7S-674-MONOMER Uniprot:Q93N67
Length = 337
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 79/316 (25%), Positives = 132/316 (41%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHE---FHLV--DLRVMD 82
RI VTG G++ S + +L G+ + D +D E ++V D+R +
Sbjct: 7 RILVTGGAGYVGSALVPQLLELGYRVTVYD---TLFFGDDFLPKENPYLNIVEGDIRDTE 63
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
+ K D V +LA F + + ++ N M++A++ +GVKRF YASS
Sbjct: 64 RLKQCFKDADAVISLACISNDASF-ELDETLSTSINLEAFEPMVKAAKAAGVKRFIYASS 122
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELC-KHYTKDFGIECRVGRFHN 201
+ +Y ET +E P P Y K E L KH + +F C R
Sbjct: 123 SSVYGVS---ETKDVTEEH---PLVPLTLYNKYKGMCEPLLFKHQSPEF--VCVTIRPAT 174
Query: 202 IYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI-DECVEGVLRLTKSD 260
+ G + + R + +K ++G G Q R + D C L L D
Sbjct: 175 LCG-YAPRQ--RLDLSVNILTNHAVNNNKITVFG-GSQLRPNLHVQDMCDLYKLLLVVPD 230
Query: 261 FR---EPVNIGSDEMVSMNEMAEIVLSFEDK----KLPIHHIPGP-EGVRGRNSDNTLIK 312
+ E N+G + S+ E+A IV + ++ K PI + P + +R + ++ IK
Sbjct: 231 EKIAGETFNVGYENK-SIMEIAHIVKNIVEEEFPEKAPIDIVTAPTDDIRSYHINSDKIK 289
Query: 313 EKLGWAPSMKLKDGLR 328
LG+ ++D +R
Sbjct: 290 RCLGFEAKYSIEDAVR 305
>ZFIN|ZDB-GENE-061013-348 [details] [associations]
symbol:zgc:153776 "zgc:153776" species:7955 "Danio
rerio" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-061013-348 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOVERGEN:HBG000059
UniGene:Dr.92565 EMBL:BC124732 IPI:IPI00805523
RefSeq:NP_001070752.1 ProteinModelPortal:Q08BG6 PRIDE:Q08BG6
GeneID:768139 KEGG:dre:768139 InParanoid:Q08BG6 NextBio:20918459
Bgee:Q08BG6 Uniprot:Q08BG6
Length = 320
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 66/320 (20%), Positives = 130/320 (40%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNC 84
E +R+ VTG G + I R +K EG +W ++ E + R +
Sbjct: 6 EPMRVLVTGGSGLVGRAIERVVKDEGRE--GEEWTFLSSKDANLLSAE----ETRAIFQK 59
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMY-NNTMISFNMLEASRISGVKRFFYASSA 143
+ T HV +LAA +GG+ F ++ + NN I+ N+L+ + GV + S
Sbjct: 60 YRPT----HVIHLAAMVGGL-FRNMRQNLDFWRNNVFINDNVLQTANEFGVVKVVSCLST 114
Query: 144 CIYPEFKQLETNVSLKESDAWPAEPQDA---YGLEKLASEELCKHYTKDFGIECRVGRFH 200
CI+P+ +T + E+ P D+ Y K + + K +G
Sbjct: 115 CIFPD----KTTYPIDETMIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTSVIPT 170
Query: 201 NIYGPFGTWK-GGREKAPAAFCRKALTSTD--KFEMWGDGLQTRSFTF-IDECVEGVLRL 256
N++G + P + L + ++WG G R F + +D + L
Sbjct: 171 NVFGAHDNFNIDDGHVLPGLIHKTYLAKKEGKPLQVWGSGKPLRQFIYSLDLARLFLWVL 230
Query: 257 TKSDFREPV--NIGSDEMVSMNEMAEIVL-SFEDKKLPIHHIPGPEGVRGRNSDNTLIKE 313
+ D +P+ ++G ++ +S+ + A+ V+ + K I+ +G + + N +++
Sbjct: 231 REYDEVDPIILSVGEEDELSIKDCADAVVDALGFKGDVIYDTSKADGQFKKTASNAKLRQ 290
Query: 314 KLGWAPSMKLKDGLRITYFW 333
L ++ ++ T W
Sbjct: 291 YLPDFQFTPFREAIKETCDW 310
>UNIPROTKB|Q2KIT8 [details] [associations]
symbol:TSTA3 "Tissue specific transplantation antigen P35B"
species:9913 "Bos taurus" [GO:0050577 "GDP-L-fucose synthase
activity" evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0019835 GO:GO:0019673 HOGENOM:HOG000168011
KO:K02377 GO:GO:0050577 OMA:IHCAGRV GeneTree:ENSGT00390000004681
CTD:7264 HOVERGEN:HBG000059 OrthoDB:EOG4VT5XR GO:GO:0042350
EMBL:DAAA02037463 EMBL:BC112514 IPI:IPI00728290
RefSeq:NP_001039604.1 UniGene:Bt.64492 STRING:Q2KIT8
Ensembl:ENSBTAT00000049133 GeneID:513158 KEGG:bta:513158
InParanoid:Q2KIT8 NextBio:20870730 Uniprot:Q2KIT8
Length = 321
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 68/328 (20%), Positives = 127/328 (38%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD 82
P RI VTG G + I +++ +G + DW D+ R +
Sbjct: 4 PRGTRRILVTGGSGLVGRAI-QKVVEDGARLPGEDWVFVSSKDADLT----DAAQTRALF 58
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYAS 141
++ T HV +LAA +GG+ F +++ + N I+ N+L ++ GV++
Sbjct: 59 QQVQPT----HVIHLAAMVGGL-FRNIKYNLDFWRKNIHINDNVLHSAFEVGVRKVVSCL 113
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
S CI+P+ + ++ + P Y K + + Y + G N
Sbjct: 114 STCIFPDKTTYPIDETMIHNGP-PHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTN 172
Query: 202 IYGPFGTWKGGREKAPAAFCRK---ALTSTDKFEMWGDGLQTRSFTF-IDECVEGVLRLT 257
++GP + K A +S +WG G R F + +D + L
Sbjct: 173 VFGPHDNFSIEDGHVLPGLIHKVHLAKSSGSALTVWGTGRPRRQFIYSLDLARLFIWALR 232
Query: 258 KSDFREPV--NIGSDEMVSMNEMAEIVLSFEDKKLPI-HHIPGPEGVRGRNSDNTLIKEK 314
+ D EP+ ++G ++ VS+ E AE V+ D + +G + + N ++
Sbjct: 233 EYDEVEPIILSVGEEDEVSVQEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNAKLRAY 292
Query: 315 LGWAPSMKLKDGLRITYFWIKEQIEKEK 342
L K ++ T W + E+ +
Sbjct: 293 LPDFRFTPFKQAVKETCAWFTDNYEQAR 320
>UNIPROTKB|E2RM30 [details] [associations]
symbol:TSTA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835
GO:GO:0019673 KO:K02377 GO:GO:0050577 OMA:IHCAGRV
GeneTree:ENSGT00390000004681 CTD:7264 GO:GO:0042350
EMBL:AAEX03008935 RefSeq:XP_532346.2 ProteinModelPortal:E2RM30
Ensembl:ENSCAFT00000002068 GeneID:475116 KEGG:cfa:475116
NextBio:20851008 Uniprot:E2RM30
Length = 321
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 62/275 (22%), Positives = 114/275 (41%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD 82
P +RI VTG G + I +++ ++G + DW D+ R +
Sbjct: 4 PGGSVRILVTGGSGLVGRAI-QKVVADGAGLPGEDWVFVSSKDADLT----DAAQTRALF 58
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYAS 141
++ T HV +LAA +GG+ F +++ + N I+ N+L ++ GV++
Sbjct: 59 EKVRPT----HVIHLAAMVGGL-FRNIKYNLDFWRKNVHINDNVLHSAFEVGVRKVVSCL 113
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDA---YGLEKLASEELCKHYTKDFGIECRVGR 198
S CI+P+ +T + E+ P ++ Y K + + Y + G
Sbjct: 114 STCIFPD----KTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVI 169
Query: 199 FHNIYGPFGTWKGGREKAPAAFCRK---ALTSTDKFEMWGDGLQTRSFTF-IDECVEGVL 254
N++GP + K A +S +WG G R F + +D +
Sbjct: 170 PTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGKPRRQFIYSLDLARLFIW 229
Query: 255 RLTKSDFREPV--NIGSDEMVSMNEMAEIVLSFED 287
L + + EP+ ++G ++ VS+ E AE V+ D
Sbjct: 230 VLREYNEVEPIILSVGEEDEVSIQEAAEAVVEAMD 264
>UNIPROTKB|Q13630 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=TAS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=IEA;IDA;TAS]
[GO:0042356 "GDP-4-dehydro-D-rhamnose reductase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IC] [GO:0007159
"leukocyte cell-cell adhesion" evidence=NAS] [GO:0019673
"GDP-mannose metabolic process" evidence=IDA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005737
eggNOG:COG0451 DrugBank:DB00157 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0009055 GO:GO:0050662 GO:GO:0019835 GO:GO:0016853
EMBL:CH471162 GO:GO:0007159 GO:GO:0019673 HOGENOM:HOG000168011
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV EMBL:U58766
EMBL:AK313560 EMBL:BC001941 EMBL:BC093061 IPI:IPI00014361
RefSeq:NP_003304.1 UniGene:Hs.404119 PDB:4B8W PDBsum:4B8W
ProteinModelPortal:Q13630 SMR:Q13630 IntAct:Q13630 STRING:Q13630
PhosphoSite:Q13630 DMDM:13124123 REPRODUCTION-2DPAGE:IPI00014361
PaxDb:Q13630 PeptideAtlas:Q13630 PRIDE:Q13630 DNASU:7264
Ensembl:ENST00000425753 Ensembl:ENST00000529064 GeneID:7264
KEGG:hsa:7264 UCSC:uc003yza.2 CTD:7264 GeneCards:GC08M144694
HGNC:HGNC:12390 HPA:HPA023361 MIM:137020 neXtProt:NX_Q13630
PharmGKB:PA37056 HOVERGEN:HBG000059 InParanoid:Q13630
OrthoDB:EOG4VT5XR PhylomeDB:Q13630 GenomeRNAi:7264 NextBio:28399
ArrayExpress:Q13630 Bgee:Q13630 CleanEx:HS_TSTA3
Genevestigator:Q13630 GermOnline:ENSG00000104522 GO:GO:0042356
Uniprot:Q13630
Length = 321
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 67/331 (20%), Positives = 133/331 (40%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD 82
P +RI VTG G + I +++ ++G + DW D+ R +
Sbjct: 4 PQGSMRILVTGGSGLVGKAI-QKVVADGAGLPGEDWVFVSSKDADLT----DTAQTRALF 58
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYAS 141
++ T HV +LAA +GG+ F +++ + N ++ N+L ++ G ++
Sbjct: 59 EKVQPT----HVIHLAAMVGGL-FRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCL 113
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDA---YGLEKLASEELCKHYTKDFGIECRVGR 198
S CI+P+ +T + E+ P ++ Y K + + Y + +G
Sbjct: 114 STCIFPD----KTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVI 169
Query: 199 FHNIYGPFGTWKGGREKAPAAFCRK---ALTSTDKFEMWGDGLQTRSFTF-IDECVEGVL 254
N++GP + K A +S +WG G R F + +D +
Sbjct: 170 PTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIW 229
Query: 255 RLTKSDFREPV--NIGSDEMVSMNEMAEIVLSFEDKKLPI-HHIPGPEGVRGRNSDNTLI 311
L + + EP+ ++G ++ VS+ E AE V+ D + +G + + N+ +
Sbjct: 230 VLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKL 289
Query: 312 KEKLGWAPSMKLKDGLRITYFWIKEQIEKEK 342
+ L K ++ T W + E+ +
Sbjct: 290 RTYLPDFRFTPFKQAVKETCAWFTDNYEQAR 320
>UNIPROTKB|E9PKL9 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0044237
EMBL:AC067930 HGNC:HGNC:12390 IPI:IPI00981359
ProteinModelPortal:E9PKL9 SMR:E9PKL9 Ensembl:ENST00000529048
ArrayExpress:E9PKL9 Bgee:E9PKL9 Uniprot:E9PKL9
Length = 268
Score = 126 (49.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 60/275 (21%), Positives = 114/275 (41%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD 82
P +RI VTG G + I +++ ++G + DW D+ R +
Sbjct: 4 PQGSMRILVTGGSGLVGKAI-QKVVADGAGLPGEDWVFVSSKDADLT----DTAQTRALF 58
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYAS 141
++ T HV +LAA +GG+ F +++ + N ++ N+L ++ G ++
Sbjct: 59 EKVQPT----HVIHLAAMVGGL-FRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCL 113
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDA---YGLEKLASEELCKHYTKDFGIECRVGR 198
S CI+P+ +T + E+ P ++ Y K + + Y + +G
Sbjct: 114 STCIFPD----KTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVI 169
Query: 199 FHNIYGPFGTWKGGREKAPAAFCRK---ALTSTDKFEMWGDGLQTRSFTF-IDECVEGVL 254
N++GP + K A +S +WG G R F + +D +
Sbjct: 170 PTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIW 229
Query: 255 RLTKSDFREPV--NIGSDEMVSMNEMAEIVLSFED 287
L + + EP+ ++G ++ VS+ E AE V+ D
Sbjct: 230 VLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMD 264
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 128 (50.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 72/338 (21%), Positives = 138/338 (40%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-----TEDMFCHEFHLVDLRVM 81
+ I +TG G+I SH L + + II D N + +++ +F V+
Sbjct: 1 MAILITGGAGYIGSHTCVELLNNNYKIIVVDNLSNSSIESLNRVKEITGKQFEFYKENVL 60
Query: 82 D----NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRF 137
+ N + + ++ V + A +G + YNN + + + + + VK F
Sbjct: 61 NREKMNEIFLENNIEAVIHFAG-FKAVGESTTTPLAYYYNNIISAIVLCDVMQKHNVKNF 119
Query: 138 FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTK-DFGIECRV 196
++SSA +Y K L ++ +P + YG KL E++ + K D +
Sbjct: 120 IFSSSATVYGIPKTLPI------TEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEWSIAL 173
Query: 197 GRFHNIYGPFGTWKGGR-EKAPAAF--------CRKALTSTDKFEMWG------DGLQTR 241
R+ N PFG + GR + P + A+ + ++G DG R
Sbjct: 174 LRYFN---PFGAHQSGRIGEDPNGIPNNLMPYVTQVAVGKLKELNIFGNDYPTKDGTGVR 230
Query: 242 SFTFIDECVEGVLR----LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG 297
+ + + +G ++ + K+ E N+G+ + S+ EM + KK+P + + G
Sbjct: 231 DYIHVVDLAKGHVKALEKVLKTKGIEAYNLGTGKGYSVLEMVKAFEKVSGKKIP-YKVIG 289
Query: 298 --PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 333
P V +D + K +LGW L++ ++ W
Sbjct: 290 RRPGDVAICFADVSKAKRELGWEAEYGLEEMCVDSWRW 327
>UNIPROTKB|Q6T1X6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:143495
"Aneurinibacillus thermoaerophilus" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AY442352
PDB:2PK3 PDBsum:2PK3 ProteinModelPortal:Q6T1X6 SMR:Q6T1X6
BRENDA:1.1.1.281 EvolutionaryTrace:Q6T1X6 GO:GO:0033705
Uniprot:Q6T1X6
Length = 309
Score = 126 (49.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 66/310 (21%), Positives = 125/310 (40%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDN--C 84
+R +TG GF+ ++A L + + + + NE ++ ++ L +MD+
Sbjct: 1 MRALITGVAGFVGKYLANHLTEQNVEVFGTS-RNNEAKLPNV-----EMISLDIMDSQRV 54
Query: 85 LKVTKGV--DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYAS 141
KV + D++F+LAA + N N + ++L+A R S + R
Sbjct: 55 KKVISDIKPDYIFHLAAK-SSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIG 113
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
S+ Y E+ VS +E+ P P YG+ K + L + Y K +G++ R N
Sbjct: 114 SSEEYGMILPEESPVS-EENQLRPMSP---YGVSKASVGMLARQYVKAYGMDIIHTRTFN 169
Query: 202 IYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF 261
GP + + + + G+ R FT + + V+ L++
Sbjct: 170 HIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGK 229
Query: 262 REPV-NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP---GPEGVRGRNSDNTLIKEKLGW 317
V N+ S + ++ +++L+ + K+ P P V N +K+ GW
Sbjct: 230 TGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNKRLKDSTGW 289
Query: 318 APSMKLKDGL 327
P + L+ L
Sbjct: 290 KPRIPLEKSL 299
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 127 (49.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 77/340 (22%), Positives = 137/340 (40%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE-----HMTEDMFC-H----EFHLVDL 78
+ V+G G+I SH +L G+ ++ D N + + H FH VDL
Sbjct: 6 VLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVDL 65
Query: 79 R---VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI-SFNMLEASRISGV 134
R ++ TK D V + A + +G ++ YNN ++ + +LE G
Sbjct: 66 RDRSALEKIFSETK-FDAVIHFAG-LKAVGE-SVEKPLLYYNNNLVGTITLLEVMAQHGC 122
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKH-YTKDFGIE 193
K ++SSA +Y K++ ++ +P + YG KL EE+C+ Y D +
Sbjct: 123 KNLVFSSSATVYGSPKEVPC------TEEFPISALNPYGRTKLFIEEICRDVYGSDPEWK 176
Query: 194 CRVGRFHNIYG--PFGTWKGGREKAP---AAFCRK-ALTSTDKFEMWG------DGLQTR 241
+ R+ N G P G P F ++ A+ ++G DG R
Sbjct: 177 IILLRYFNPVGAHPSGDIGEDPRGIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVR 236
Query: 242 SFTFIDECVEG-VLRLTK-SDFR---EPVNIGSDEMVSMNEMAEIVLSFEDKKLPI---H 293
+ + + +G + L K D + E N+G+ S+ EM + KK+P+
Sbjct: 237 DYIHVIDLADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMVDAFEKASGKKIPLVIAG 296
Query: 294 HIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 333
PG V +++ + +L W +++ R + W
Sbjct: 297 RRPGDAEVVYASTERA--ESELNWKAKYGIEEMCRDLWNW 334
>UNIPROTKB|G4MX57 [details] [associations]
symbol:MGG_08012 "UDP-glucose 4-epimerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:CM001232 KO:K01784 RefSeq:XP_003714962.1
ProteinModelPortal:G4MX57 SMR:G4MX57 EnsemblFungi:MGG_08012T0
GeneID:2678278 KEGG:mgr:MGG_08012 Uniprot:G4MX57
Length = 369
Score = 87 (35.7 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 39/195 (20%), Positives = 76/195 (38%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE----DMFCHE---FHLVDLR-- 79
+ +TG G+I S + L + ++ D N ++ C + FH VD+
Sbjct: 6 VLITGGTGYIGSFTSLALLENDYDVVIVDNLYNSSAVAIDRIELICGKRPAFHNVDITDE 65
Query: 80 -VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI--SFNMLEASRISGVKR 136
+D +D V + AA + +G +S + Y + S ++L + + V
Sbjct: 66 AALDKVFDAHPEIDSVIHFAA-LKAVG--ESGEIPLEYYRVNVGGSISLLRSMQKHNVCN 122
Query: 137 FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRV 196
++SSA +Y + ++ + + E P P + YG K E++ + + +
Sbjct: 123 IVFSSSATVYGDATRVPNMIPIPEH--CPIGPTNTYGRTKSTIEDVISDH-----VNAQR 175
Query: 197 GRFHNIYGPFGTWKG 211
PF W G
Sbjct: 176 NNLKKADKPFDMWNG 190
Score = 81 (33.6 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 25/106 (23%), Positives = 48/106 (45%)
Query: 236 DGLQTRSFTFIDECVEGVLRLTK--SDFREPV---NIGSDEMVSMNEMAEIVLSFEDKKL 290
DG R + + + +G L D + V N+GS ++ EM + S + L
Sbjct: 244 DGTAIRDYIHVLDLAKGHLAALNYLRDNKPGVKAWNLGSGRGSTVFEMIKAFSSVVGRDL 303
Query: 291 PIHHIPGPEG-VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIK 335
P +P +G V ++ L ++LGW ++++D + + W+K
Sbjct: 304 PYEVVPRRQGDVLDLTANPALANKELGWKTELRMEDACQDLWKWVK 349
>ZFIN|ZDB-GENE-071004-107 [details] [associations]
symbol:zgc:173683 "zgc:173683" species:7955 "Danio
rerio" [GO:0044237 "cellular metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-071004-107 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:BC153420 IPI:IPI00997417
RefSeq:NP_001103317.1 UniGene:Dr.92565 ProteinModelPortal:A8E513
GeneID:100126119 KEGG:dre:100126119 NextBio:20788981 Uniprot:A8E513
Length = 320
Score = 123 (48.4 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 58/269 (21%), Positives = 111/269 (41%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNC 84
E +R+ VTG G + I R +K EG +W ++ + + R +
Sbjct: 6 EPMRVLVTGGSGLVGRAIERVVKEEGRE--GEEWTFLSSKEANLLSAK----ETRAIFEK 59
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMY-NNTMISFNMLEASRISGVKRFFYASSA 143
+ T HV +LAA +GG+ F ++ + NN I+ N+L+ + GV + S
Sbjct: 60 YRPT----HVIHLAAMVGGL-FRNMRQNLDFWRNNVFINDNVLQTANEFGVVKVVSCLST 114
Query: 144 CIYPEFKQLETNVSLKESDAWPAEPQDA---YGLEKLASEELCKHYTKDFGIECRVGRFH 200
CI+P+ +T + E+ P D+ Y K + + K +G
Sbjct: 115 CIFPD----KTTYPIDETMIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTAVIPT 170
Query: 201 NIYGPFGTWK-GGREKAPAAFCRKALTSTD--KFEMWGDGLQTRSFTF-IDECVEGVLRL 256
N++G + P + L + ++WG G R F + +D + L
Sbjct: 171 NVFGAHDNFNIEDGHVLPGLIHKTYLAKKEGKPLQVWGSGKPLRQFIYSLDLARLFLWVL 230
Query: 257 TKSDFREPV--NIGSDEMVSMNEMAEIVL 283
+ D +P+ ++G ++ +S+ + A+ V+
Sbjct: 231 REYDEVDPIILSVGEEDELSIKDCADAVV 259
>TAIR|locus:2041974 [details] [associations]
symbol:AXS1 "UDP-D-apiose/UDP-D-xylose synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=IDA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA]
[GO:0051287 "NAD binding" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005829 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.40.50.720 GO:GO:0051287 EMBL:AC005824 GO:GO:0048040
KO:K12449 ProtClustDB:PLN02427 EMBL:AF361574 EMBL:AY086830
EMBL:BT001016 EMBL:AY442191 EMBL:AY735589 EMBL:AY924751
IPI:IPI00541963 PIR:G84677 RefSeq:NP_180353.1 UniGene:At.23574
ProteinModelPortal:Q9ZUY6 SMR:Q9ZUY6 STRING:Q9ZUY6 PRIDE:Q9ZUY6
EnsemblPlants:AT2G27860.1 GeneID:817332 KEGG:ath:AT2G27860
TAIR:At2g27860 HOGENOM:HOG000261188 InParanoid:Q9ZUY6 OMA:EYKENAQ
PhylomeDB:Q9ZUY6 BioCyc:ARA:AT2G27860-MONOMER
BioCyc:MetaCyc:AT2G27860-MONOMER ArrayExpress:Q9ZUY6
Genevestigator:Q9ZUY6 GO:GO:0009226 Uniprot:Q9ZUY6
Length = 389
Score = 92 (37.4 bits), Expect = 8.0e-05, Sum P(3) = 8.0e-05
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEG-HYIIASDW--KKNEHMTEDMFCH-----EFH 74
P + L I + GAGGFI SH+ +L +E H ++A D K +H+ E +FH
Sbjct: 14 PIQPLTICMIGAGGFIGSHLCEKLLTETPHKVLALDVYNDKIKHLLEPDTVEWSGRIQFH 73
Query: 75 LVDLRVMDNCLK-VTKGVDHVFNLAA 99
++++ D+ L+ + K D + NLAA
Sbjct: 74 RINIK-HDSRLEGLVKMADLIINLAA 98
Score = 59 (25.8 bits), Expect = 8.0e-05, Sum P(3) = 8.0e-05
Identities = 28/122 (22%), Positives = 53/122 (43%)
Query: 171 AYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTW----KGGREKAPAAF-C-RKA 224
+Y K E L + G+E + R N GP + G E P C
Sbjct: 184 SYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243
Query: 225 LTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREP---VNIGS-DEMVSMNEMAE 280
L + ++ G R+F +I++ +E VL + ++ R N+G+ + V++ ++AE
Sbjct: 244 LLRREPLKLVDGGESQRTFVYINDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQLAE 303
Query: 281 IV 282
++
Sbjct: 304 MM 305
Score = 52 (23.4 bits), Expect = 8.0e-05, Sum P(3) = 8.0e-05
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 304 RNSDNTLIKEKLGWAPSMKLKDGLRIT 330
R D T+I +LGW P L D L T
Sbjct: 341 RIPDMTIINRQLGWNPKTSLWDLLEST 367
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 114 (45.2 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 63/268 (23%), Positives = 116/268 (43%)
Query: 91 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRI--SGVK-------RFFYAS 141
+D V +LAA+ I + + + N + ++ +LEA+R SG+ RF + S
Sbjct: 74 LDAVMHLAAESHVDRSI-TGPAAFIETNIVGTYVLLEAARNYWSGLDDEKKKNFRFHHIS 132
Query: 142 SACIY---PEFKQLETNVSLK---ESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
+ +Y P ++ +N +L+ E+ A+ P Y K +S+ L + + + +G+
Sbjct: 133 TDEVYGDLPHPDEVNSNETLQLFTETTAYA--PSSPYSASKASSDHLVRAWKRTYGLPTI 190
Query: 196 VGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 255
V N YGP+ EK AL ++G G Q R + ++++ +
Sbjct: 191 VSNCSNNYGPYHF----PEKLIPLVILNALEGK-ALPIYGKGDQIRDWLYVEDHARALYT 245
Query: 256 L-TKSDFREPVNIGS-------DEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEGVRGRNS 306
+ T+ E NIG D + ++ ++ EIV + + I ++ G R +
Sbjct: 246 VVTEGKAGETYNIGGHNEKKNIDVVFTICDLLDEIVPKEKSYREQITYVADRPGHDRRYA 305
Query: 307 -DNTLIKEKLGWAPSMKLKDGLRITYFW 333
D I +LGW P + G+R T W
Sbjct: 306 IDADKISRELGWKPQETFESGIRKTVEW 333
Score = 49 (22.3 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 27 LRISVTGAGGFIASHIARRL 46
++I VTG GFI S + R +
Sbjct: 1 MKILVTGGAGFIGSAVVRHI 20
>UNIPROTKB|C9JFU6 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HGNC:HGNC:17729
IPI:IPI00916816 ProteinModelPortal:C9JFU6 SMR:C9JFU6 STRING:C9JFU6
Ensembl:ENST00000444193 ArrayExpress:C9JFU6 Bgee:C9JFU6
Uniprot:C9JFU6
Length = 121
Score = 101 (40.6 bits), Expect = 0.00010, P = 0.00010
Identities = 31/100 (31%), Positives = 45/100 (45%)
Query: 118 NTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYG 173
NT+ + NML ++ G R AS++ +Y + V + D W P P+ Y
Sbjct: 11 NTIGTLNMLGLAKRVGA-RLLLASTSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYD 64
Query: 174 LEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGR 213
K +E +C Y K G+E RV R N +GP GR
Sbjct: 65 EGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGR 104
>MGI|MGI:98857 [details] [associations]
symbol:Tsta3 "tissue specific transplantation antigen P35B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016853 "isomerase
activity" evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=ISO] [GO:0019835 "cytolysis" evidence=IMP] [GO:0042351
"'de novo' GDP-L-fucose biosynthetic process" evidence=ISO]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 MGI:MGI:98857 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835
GO:GO:0016853 GO:GO:0019673 HOGENOM:HOG000168011 KO:K02377
GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV CTD:7264 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:X53620 EMBL:X53621 EMBL:X53622 EMBL:X53623
EMBL:X53624 EMBL:X53625 EMBL:X53626 EMBL:X53627 EMBL:X53628
EMBL:M30127 EMBL:M30128 EMBL:AK029632 IPI:IPI00133690 PIR:S12516
RefSeq:NP_112478.1 UniGene:Mm.22596 ProteinModelPortal:P23591
SMR:P23591 STRING:P23591 PhosphoSite:P23591 PaxDb:P23591
PRIDE:P23591 Ensembl:ENSMUST00000023231 GeneID:22122 KEGG:mmu:22122
InParanoid:P23591 NextBio:301985 Bgee:P23591 CleanEx:MM_TSTA3
Genevestigator:P23591 GermOnline:ENSMUSG00000022570 Uniprot:P23591
Length = 321
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 65/328 (19%), Positives = 126/328 (38%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD 82
P +RI VTG G + I +++ ++G + +W D L D
Sbjct: 4 PHGSMRILVTGGSGLVGRAI-QKVVADGAGLPGEEWVFVSSKDAD-------LTDAAQTQ 55
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYAS 141
+ + HV +LAA +GG+ F +++ + N I+ N+L ++ G ++
Sbjct: 56 ALFQKVQPT-HVIHLAAMVGGL-FRNIKYNLDFWRKNVHINDNVLHSAFEVGARKVVSCL 113
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
S CI+P+ + ++ + P Y K + + Y + G N
Sbjct: 114 STCIFPDKTTYPIDETMIHNGP-PHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTN 172
Query: 202 IYGPFGTWKGGREKAPAAFCRK---ALTSTDKFEMWGDGLQTRSFTF-IDECVEGVLRLT 257
++GP+ + K A +S +WG G R F + +D + L
Sbjct: 173 VFGPYDNFNIEDGHVLPGLIHKVHLAKSSDSALTVWGTGKPRRQFIYSLDLARLFIWVLR 232
Query: 258 KSDFREPV--NIGSDEMVSMNEMAEIVLSFEDKKLPI-HHIPGPEGVRGRNSDNTLIKEK 314
+ EP+ ++G ++ VS+ E AE V+ D + +G + + N ++
Sbjct: 233 EYSEVEPIILSVGEEDEVSIKEAAEAVVEAMDFNGEVTFDSTKSDGQYKKTASNGKLRSY 292
Query: 315 LGWAPSMKLKDGLRITYFWIKEQIEKEK 342
L K ++ T W + E+ +
Sbjct: 293 LPDFRFTPFKQAVKETCTWFTDNYEQAR 320
>RGD|1307028 [details] [associations]
symbol:Tsta3 "tissue specific transplantation antigen P35B"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA;ISO] [GO:0019835 "cytolysis" evidence=IEA;ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IEA;ISO] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 RGD:1307028
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:CH473950 KO:K02377 OMA:IHCAGRV
GeneTree:ENSGT00390000004681 CTD:7264 RefSeq:NP_001120927.1
RefSeq:NP_001257718.1 UniGene:Rn.6606 Ensembl:ENSRNOT00000012306
GeneID:300036 KEGG:rno:300036 NextBio:646179 Uniprot:G3V762
Length = 321
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 66/328 (20%), Positives = 127/328 (38%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD 82
P +RI VTG G + I +++ ++G + +W D L D
Sbjct: 4 PHGSMRILVTGGSGLVGRAI-QKVVADGAGLPGEEWVFVSSKDAD-------LTDAAQTQ 55
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYAS 141
+ + HV +LAA +GG+ F +++ + N I+ N+L ++ G ++
Sbjct: 56 ALFQKVQPT-HVIHLAAMVGGL-FRNIKYNLDFWRKNVHINDNVLHSAFEVGTRKVVSCL 113
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
S CI+P+ + ++ + P Y K + + Y + G N
Sbjct: 114 STCIFPDKTTYPIDETMIHNGP-PHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTSVIPTN 172
Query: 202 IYGPFGTWKGGREKAPAAFCRK---ALTSTDKFEMWGDGLQTRSFTF-IDECVEGVLRLT 257
++GP+ + K A +S +WG G R F + +D + L
Sbjct: 173 VFGPYDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGKPRRQFIYSLDLARLFIWVLR 232
Query: 258 KSDFREPV--NIGSDEMVSMNEMAEIVLSFEDKKLPI-HHIPGPEGVRGRNSDNTLIKEK 314
+ + EP+ ++G ++ VS+ E AE V+ D + +G + + N ++
Sbjct: 233 EYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFSGEVTFDSTKSDGQYKKTASNGKLRSY 292
Query: 315 LGWAPSMKLKDGLRITYFWIKEQIEKEK 342
L K ++ T W E E+ +
Sbjct: 293 LPDFCFTPFKQAVKETCAWFTENYEQAR 320
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 48/183 (26%), Positives = 80/183 (43%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCH-EFHLVD-LRVMDNC 84
+++ +TGAGG + SH+A L + GH + A+ + ++ F E + D V D+
Sbjct: 1 MKVWITGAGGMMGSHLAEMLLAAGHDVYATYCRPTIDPSDLQFNGAEVDITDWCSVYDSI 60
Query: 85 LKVTKGVDHVFNLAADM-GGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYASS 142
T D VF+LAA + + + ++ T I F L R+ + A S
Sbjct: 61 --ATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALR--RVRPHAKIIVAGS 116
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNI 202
+ Y E ++ + + P P YG+ K A++ L Y K +G+ V R N
Sbjct: 117 SAEYGFVDPSEVPIN-ERRELRPLHP---YGVSKAATDMLAYQYHKSYGMHTVVARIFNC 172
Query: 203 YGP 205
GP
Sbjct: 173 TGP 175
>TAIR|locus:2203771 [details] [associations]
symbol:3BETAHSD/D1
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;ISS] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0047012
"sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
activity" evidence=IGI;IDA] [GO:0006084 "acetyl-CoA metabolic
process" evidence=RCA] [GO:0016126 "sterol biosynthetic process"
evidence=RCA] [GO:0016132 "brassinosteroid biosynthetic process"
evidence=RCA] [GO:0019745 "pentacyclic triterpenoid biosynthetic
process" evidence=RCA] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 PROSITE:PS50845 InterPro:IPR016040 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC015449
KO:K07748 GO:GO:0047012 EMBL:AY957470 EMBL:AK117478 EMBL:BT005166
EMBL:AY085272 IPI:IPI00543327 IPI:IPI00545978 PIR:F96513
RefSeq:NP_564502.1 RefSeq:NP_849779.1 UniGene:At.38654
ProteinModelPortal:Q9FX01 SMR:Q9FX01 IntAct:Q9FX01 PaxDb:Q9FX01
PRIDE:Q9FX01 EnsemblPlants:AT1G47290.2 GeneID:841132
KEGG:ath:AT1G47290 TAIR:At1g47290 InParanoid:Q9FX01 OMA:YLVELAY
PhylomeDB:Q9FX01 ProtClustDB:CLSN2688501 Genevestigator:Q9FX01
Uniprot:Q9FX01
Length = 439
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 59/233 (25%), Positives = 96/233 (41%)
Query: 31 VTGAGGFIASHIARRL-KSEGHYIIASDWKK----NEHMTEDMFCH-------EFHLVDL 78
VTG GF A H+ L + + ++ +D N H + ++ DL
Sbjct: 14 VTGGRGFAARHLVEMLVRYQMFHVRIADLAPAIVLNPHEETGILGEAIRSGRVQYVSADL 73
Query: 79 RVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138
R +K +G + VF++AA + Q +SV + T N+++A GVKR
Sbjct: 74 RNKTQVVKGFQGAEVVFHMAAPDSSINNHQLQYSVNVQGTT----NVIDACIEVGVKRLI 129
Query: 139 YASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGI-ECRVG 197
Y SS + F + ++ ES +P + D+Y K E L G+ C +
Sbjct: 130 YTSSPSVV--FDGVHGTLNADESLPYPPKHNDSYSATKAEGEALILKANGRSGLLTCCI- 186
Query: 198 RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 250
R +I+GP G + P+ A KF + GDG FT+++ V
Sbjct: 187 RPSSIFGP-----GDKLMVPS-LVTAARAGKSKFII-GDGSNFYDFTYVENVV 232
>TAIR|locus:2014235 [details] [associations]
symbol:RHD1 "ROOT HAIR DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0010053 "root epidermal cell differentiation" evidence=IMP]
[GO:0009832 "plant-type cell wall biogenesis" evidence=TAS]
[GO:0009969 "xyloglucan biosynthetic process" evidence=IMP]
[GO:0010246 "rhamnogalacturonan I biosynthetic process"
evidence=IMP] [GO:0010306 "rhamnogalacturonan II biosynthetic
process" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005795 GO:GO:0009832 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GO:GO:0010053 EMBL:AC066689 GO:GO:0009969 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:BT011226 EMBL:BT012154 IPI:IPI00537209
RefSeq:NP_176625.1 UniGene:At.25758 ProteinModelPortal:Q9C7W7
SMR:Q9C7W7 STRING:Q9C7W7 PaxDb:Q9C7W7 PRIDE:Q9C7W7
EnsemblPlants:AT1G64440.1 GeneID:842752 KEGG:ath:AT1G64440
TAIR:At1g64440 InParanoid:Q9C7W7 OMA:HVAGYKY PhylomeDB:Q9C7W7
Genevestigator:Q9C7W7 Uniprot:Q9C7W7
Length = 348
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 75/342 (21%), Positives = 138/342 (40%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-----EDMFC-H----EFHLVDL 78
I VTG G+I SH +L G+ + D N + +D+ H H VDL
Sbjct: 5 ILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRVKDLAGDHGQNLTVHQVDL 64
Query: 79 R---VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMIS-FNMLEASRISGV 134
R ++ TK D V + A + +G + ++ YNN +I+ +LE G
Sbjct: 65 RDKPALEKVFSETK-FDAVMHFAG-LKAVGESVAK-PLLYYNNNLIATITLLEVMAAHGC 121
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
K+ ++SSA +Y K++ +ES P YG KL E++C+ + E
Sbjct: 122 KKLVFSSSATVYGWPKEVPCT---EES---PLSGMSPYGRTKLFIEDICRDVQRG-DPEW 174
Query: 195 RVGRFHNIYGPFGTWKGGR-EKAPAA-------FCRKALTST-DKFEMWG------DGLQ 239
R+ + P G GR + P + ++ + +++G DG
Sbjct: 175 RIIMLR-YFNPVGAHPSGRIGEDPCGTPNNLMPYVQQVVVGRLPNLKIYGTDYTTKDGTG 233
Query: 240 TRSFTFIDECVEG-VLRLTKSDFRE----PVNIGSDEMVSMNEMAEIVLSFEDKKLPIHH 294
R + + + +G + L K D E N+G+ + ++ EM + K+P+
Sbjct: 234 VRDYIHVVDLADGHICALQKLDDTEIGCEVYNLGTGKGTTVLEMVDAFEKASGMKIPLVK 293
Query: 295 I---PGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 333
+ PG +++ + +L W + +++ R + W
Sbjct: 294 VGRRPGDAETVYASTEKA--ERELNWKANFGIEEMCRDQWNW 333
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 111 (44.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 42/183 (22%), Positives = 72/183 (39%)
Query: 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAF 220
++ P P Y K +S+ L + + + +G V N YGP+ EK
Sbjct: 174 TETTPYTPSSPYSASKASSDHLVRAWLRTYGFPTIVTNCSNNYGPYHF----PEKLIPLV 229
Query: 221 CRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL-TKSDFREPVNIGSDEMVSMNEMA 279
AL ++G G Q R + ++++ + ++ T+ E NIG E+
Sbjct: 230 ILNALEGKP-LPIYGKGDQIRDWLYVEDHARALFKVVTEGKVGETYNIGGHNEKRNLEVV 288
Query: 280 EIVLSFEDKKLP--------IHHIPGPEGVRGRNS-DNTLIKEKLGWAPSMKLKDGLRIT 330
+ + S D +P I ++ G R + D T + +L W P + GLR T
Sbjct: 289 QTICSILDSLVPKNTPYAEQIAYVADRPGHDRRYAIDATKMSAELDWQPQETFETGLRKT 348
Query: 331 YFW 333
W
Sbjct: 349 VEW 351
Score = 49 (22.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 27 LRISVTGAGGFIASHIARRL 46
++I VTG GFI S + R +
Sbjct: 1 MKILVTGGAGFIGSAVVRHI 20
>FB|FBgn0034794 [details] [associations]
symbol:Gmer "GDP-4-keto-6-deoxy-D-mannose
3,5-epimerase/4-reductase" species:7227 "Drosophila melanogaster"
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0042356 "GDP-4-dehydro-D-rhamnose reductase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0033227
"dsRNA transport" evidence=IMP] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:AE013599 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
GO:GO:0033227 KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
EMBL:AM231688 EMBL:AY060873 EMBL:AY119148 RefSeq:NP_611734.1
UniGene:Dm.739 ProteinModelPortal:Q9W1X8 SMR:Q9W1X8 STRING:Q9W1X8
PaxDb:Q9W1X8 PRIDE:Q9W1X8 EnsemblMetazoa:FBtr0071905 GeneID:37638
KEGG:dme:Dmel_CG3495 CTD:37638 FlyBase:FBgn0034794
GeneTree:ENSGT00390000004681 InParanoid:Q9W1X8 OrthoDB:EOG4XWDDK
PhylomeDB:Q9W1X8 GenomeRNAi:37638 NextBio:804682 Bgee:Q9W1X8
GermOnline:CG3495 Uniprot:Q9W1X8
Length = 321
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 47/204 (23%), Positives = 92/204 (45%)
Query: 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQL 152
HV +LAA +GG+ +N+ + NN +I+ N+L+ + G + S CI+P+
Sbjct: 58 HVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDKTSY 117
Query: 153 ETNVSLKESDAWPAEPQD-AYGLEKLASEELCKHYTKDFG------IECRVGRFHNIYGP 205
+ ++ + P P + Y K + Y +G I C + H+ Y P
Sbjct: 118 PIDETMVHNG--PPHPSNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDNYNP 175
Query: 206 FGTW--KGGREKAPAAFCRKA-LTSTDK-FEMWGDGLQTRSFTFIDECVEGVLRLTKS-D 260
+ G + K + DK F ++G G+ R F + + E ++ + ++ +
Sbjct: 176 EVSHVIPGMIYRMHQLVTEKTDVPENDKVFTVFGSGMPLRQFVYSRDLAELMIWVLRNYE 235
Query: 261 FREPVNIGSDEM--VSMNEMAEIV 282
EP+ + +DE+ V++ E+A+ V
Sbjct: 236 SVEPIILSADEVQEVTIFEVAQAV 259
>UNIPROTKB|Q48FN6 [details] [associations]
symbol:PSPPH_3658 "UDP-glucose 4-epimerase, putative"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS]
[GO:0006012 "galactose metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:CP000058 GenomeReviews:CP000058_GR GO:GO:0003978 GO:GO:0006012
HOGENOM:HOG000167991 RefSeq:YP_275800.1 ProteinModelPortal:Q48FN6
STRING:Q48FN6 GeneID:3557056 KEGG:psp:PSPPH_3658 PATRIC:19976742
OMA:LEGWCAM ProtClustDB:CLSK458037 Uniprot:Q48FN6
Length = 326
Score = 118 (46.6 bits), Expect = 0.00025, P = 0.00025
Identities = 43/179 (24%), Positives = 74/179 (41%)
Query: 29 ISVTGAGGFIASHIARRL-KSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
+++TGA GF+ S + RRL K GH + + + + + L + +
Sbjct: 8 VAITGATGFVGSAVVRRLIKHTGHSVRVA--VRGAYSCSSERINVVSAESLAPDNQWSDL 65
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYASSACIY 146
G V + AA + + + N + N+ E + +GV+RF + SS
Sbjct: 66 VTGAHVVIHCAARVHVLNETADEPDQEYFRANVTATLNLAEQAAAAGVRRFIFLSSIKAN 125
Query: 147 PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
EF + D P P DAYG+ K +EE + + G++ + R +YGP
Sbjct: 126 GEFTH--PGAPFRADD--PCNPLDAYGVSKQKAEEGLRELSARSGMQVVIIRPVLVYGP 180
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 118 (46.6 bits), Expect = 0.00027, P = 0.00027
Identities = 43/165 (26%), Positives = 71/165 (43%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-----EDMFCHEFHLVDLRVM 81
+R+ VTG G+I SH +L GH +I D N + E + V+ +
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFI-QSNHSVIMY--NNTMISFNMLEASRISGVKRFF 138
+ L DH + G+ + +S + Y NN + ++ A R + VK F
Sbjct: 61 NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 139 YASSACIYPEFKQLETNVSLKESDAWPA-EPQDAYGLEKLASEEL 182
++SSA +Y + + + ES +P PQ YG KL E++
Sbjct: 121 FSSSATVYGD----QPKIPYVES--FPTGTPQSPYGKSKLMVEQI 159
>TIGR_CMR|CBU_0689 [details] [associations]
symbol:CBU_0689 "GDP-mannose 4,6-dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GenomeReviews:AE016828_GR GO:GO:0019673 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P93031 EMBL:AF387640
ProteinModelPortal:Q93N54 SMR:Q93N54 PRIDE:Q93N54 PATRIC:17930061
ProtClustDB:CLSK914242 BioCyc:CBUR227377:GJ7S-687-MONOMER
Uniprot:Q93N54
Length = 348
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 63/286 (22%), Positives = 116/286 (40%)
Query: 56 SDWKKNEHMTED-MFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVI 114
SD + +H +F H + D V++ + K + V+NLAA ++ + +
Sbjct: 45 SDIYEEKHKENARLFLHYGDITDGLVLNKLIHEIKPHE-VYNLAAQ----SHVRVSFDIP 99
Query: 115 MYNNTMI---SFNMLEASR-ISGVK--RFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168
+Y I + N+LEA + K RF+ ASS+ +Y + K S+ ++++ P P
Sbjct: 100 VYTMETIGLGTLNILEAIKNADNAKEIRFYQASSSEMYGDVK------SVPQTESTPFNP 153
Query: 169 QDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTST 228
+ Y K+ + +Y + +G+ G N P K + K L
Sbjct: 154 RSPYACAKVFAHYQTINYRESYGLHASTGILFNHESPRRGETFVTRKITSGIA-KILAGL 212
Query: 229 DKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDK 288
+K G+ R + + + VE + + + D + I + E S+ E+ E + +
Sbjct: 213 EKKIYLGNLEAKRDWGYAKDYVEAMWLMLQQDTPDDYVIATGETWSVKELLEYSFNLVNL 272
Query: 289 KLPIHHIPGPEGVRGRNSDNTL-----IKEKLGWAPSMKLKDGLRI 329
+ P+ R D L KEKLGW P+ ++I
Sbjct: 273 NWRDFVVIDPKYYRPAEVDLLLGEPKKAKEKLGWQPNTSFHKLIKI 318
>WB|WBGene00022616 [details] [associations]
symbol:hsd-3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
EMBL:FO081547 RefSeq:NP_508852.3 ProteinModelPortal:A4UVJ7
EnsemblMetazoa:ZC449.6 GeneID:260026 KEGG:cel:CELE_ZC449.6
CTD:260026 WormBase:ZC449.6 HOGENOM:HOG000266975 InParanoid:A4UVJ7
OMA:IVVDPNP NextBio:952782 Uniprot:A4UVJ7
Length = 359
Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
Identities = 50/189 (26%), Positives = 80/189 (42%)
Query: 31 VTGAGGFIASHIARRLKSEGHY---IIASDWKKNEHMTE---DMFCHEFH---LVDLRVM 81
+TG GGF+ +H+ L+ G I+ + H + D E+ +D +V+
Sbjct: 9 ITGGGGFLGAHLIAALQKNGDRTKCIVVDPNPRLSHFSAIDFDKSLVEYEKGSFLDRKVL 68
Query: 82 DNCLKVTKGVDHVFNLAA--DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFY 139
+ +V VF+L A G G + V +N T F ++E + GV RF Y
Sbjct: 69 E---RVLPNAITVFHLCAIGHTGWFGAQKHREYVYAFNVTGTKF-LIEKCKFFGVPRFIY 124
Query: 140 ASSACIYPEFKQLETNVSLKESDAWPAEPQ--DAYGLEKLASEELCKHY-TKDFGIECRV 196
+SS + K + + ES+ +P + + D Y K +E + T F C
Sbjct: 125 SSSIAVVFVGKPI---YNCDESEPYPLKSEYLDIYSSSKAEAEAFVRSQSTIQFKTTCL- 180
Query: 197 GRFHNIYGP 205
RF IYGP
Sbjct: 181 -RFRAIYGP 188
>UNIPROTKB|Q6A1A4 [details] [associations]
symbol:galE "UDP-galactose 4-epimerase" species:644
"Aeromonas hydrophila" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0006012 "galactose metabolic process"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AJ785765 ProteinModelPortal:Q6A1A4 SMR:Q6A1A4 Uniprot:Q6A1A4
Length = 338
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 42/165 (25%), Positives = 71/165 (43%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-----EDMFCHEFHLVDLRVM 81
+R+ VTG G+I SH +L GH ++ D N + E + + V+ +
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQSGHDVVILDNLCNSKRSVLPVIERLSGKQPTFVEGDIR 60
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFI-QSNHSVIMY--NNTMISFNMLEASRISGVKRFF 138
+ L DH G+ + +S + Y NN + ++ A R + VK F
Sbjct: 61 NEALMTEILHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 139 YASSACIYPEFKQLETNVSLKESDAWPA-EPQDAYGLEKLASEEL 182
++SSA +Y + + + ES +P PQ YG KL E++
Sbjct: 121 FSSSATVYGD----QPKIPYVES--FPTGTPQSPYGKSKLMVEQI 159
>UNIPROTKB|P77398 [details] [associations]
symbol:arnA "fused UDP-L-Ara4N formyltransferase and
UDP-GlcA C-4''-decarboxylase" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0046677
"response to antibiotic" evidence=IEA;IDA] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=IEA;IDA] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IDA]
[GO:0009245 "lipid A biosynthetic process" evidence=IEA;IDA]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR SUPFAM:SSF50486 GO:GO:0046677 GO:GO:0009245
GO:GO:0016616 GO:GO:0016742 GO:GO:0008168 Gene3D:3.10.25.10
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103 EMBL:AY057445
PIR:E64996 RefSeq:NP_416758.1 RefSeq:YP_490494.1 PDB:1U9J PDB:1YRW
PDB:1Z73 PDB:1Z74 PDB:1Z75 PDB:1Z7B PDB:1Z7E PDB:2BLL PDB:2BLN
PDBsum:1U9J PDBsum:1YRW PDBsum:1Z73 PDBsum:1Z74 PDBsum:1Z75
PDBsum:1Z7B PDBsum:1Z7E PDBsum:2BLL PDBsum:2BLN
ProteinModelPortal:P77398 SMR:P77398 DIP:DIP-11961N IntAct:P77398
MINT:MINT-1257581 PaxDb:P77398 PRIDE:P77398
EnsemblBacteria:EBESCT00000003653 EnsemblBacteria:EBESCT00000017866
GeneID:12931503 GeneID:947683 KEGG:ecj:Y75_p2218 KEGG:eco:b2255
PATRIC:32119875 EchoBASE:EB3844 EcoGene:EG14091
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
BioCyc:EcoCyc:G7168-MONOMER BioCyc:ECOL316407:JW2249-MONOMER
BioCyc:MetaCyc:G7168-MONOMER SABIO-RK:P77398
EvolutionaryTrace:P77398 Genevestigator:P77398 Uniprot:P77398
Length = 660
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 69/311 (22%), Positives = 127/311 (40%)
Query: 7 TYGAYTYEELEREPYWPSEK-LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT 65
T G L +P + + R+ + G GFI +H+ RL E HY + ++ ++
Sbjct: 295 TLGLVQGSRLNSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS 354
Query: 66 EDMFCHEFHLV--DLRVMDNCLKV-TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMIS 122
+ FH V D+ + ++ K D V L A + + ++ V + +
Sbjct: 355 RFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE-N 413
Query: 123 FNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA-EPQDAYGLEKLASEE 181
++ + KR + S++ +Y + P +P+ Y + K +
Sbjct: 414 LRIIRYC-VKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDR 472
Query: 182 LCKHYTKDFGIECRVGRFHNIYGP-FGTWKGGREKAPAAFCRKALTSTD--KFEMWGDGL 238
+ Y + G++ + R N GP R + A + L + ++ G
Sbjct: 473 VIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGK 532
Query: 239 QTRSFTFIDECVEGVLRLTKSDFR----EPVNIGSDEM-VSMNEMAEIVL-SFEDKKLPI 292
Q R FT I + +E + R+ ++ E +NIG+ E S+ E+ E++L SFE K P+
Sbjct: 533 QKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE--KHPL 590
Query: 293 -HHIPGPEGVR 302
HH P G R
Sbjct: 591 RHHFPPFAGFR 601
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 106 (42.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 46/170 (27%), Positives = 71/170 (41%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE----DMFCHE------FHLVDL 78
+ VTG G+I SH +L G+ + D N E FH VDL
Sbjct: 5 VLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVDL 64
Query: 79 R---VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI-SFNMLEASRISGV 134
R ++ TK D V + A + +G ++ YNN ++ + +LE G
Sbjct: 65 RDRPALEKIFSETK-FDAVIHFAG-LKAVGE-SVEKPLLYYNNNIVGTVTLLEVMAQYGC 121
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184
K ++SSA +Y K++ +ES P + YG KL EE+C+
Sbjct: 122 KNLVFSSSATVYGWPKEVPCT---EES---PISATNPYGRTKLFIEEICR 165
Score = 51 (23.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 23/106 (21%), Positives = 43/106 (40%)
Query: 236 DGLQTRSFTFIDECVEG-VLRLTK-SDFR---EPVNIGSDEMVSMNEMAEIVLSFEDKKL 290
DG R + + + +G + L K D + E N+G+ S+ EM KK+
Sbjct: 230 DGTGVRDYIHVMDLADGHIAALRKLDDLKISCEVYNLGTGNGTSVLEMVAAFEKASGKKI 289
Query: 291 PI---HHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 333
P+ PG V +++ + +L W +++ R + W
Sbjct: 290 PLVMAGRRPGDAEVVYASTEKA--ERELNWKAKNGIEEMCRDLWNW 333
>TAIR|locus:2200018 [details] [associations]
symbol:AXS2 "UDP-D-apiose/UDP-D-xylose synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=ISS]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=ISS]
[GO:0048046 "apoplast" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
EMBL:CP002684 GO:GO:0005829 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0048046 GO:GO:0044237
EMBL:AC011438 EMBL:BT001220 IPI:IPI00543705 PIR:C86216
RefSeq:NP_563807.1 UniGene:At.20110 ProteinModelPortal:Q9SGE0
SMR:Q9SGE0 STRING:Q9SGE0 PRIDE:Q9SGE0 ProMEX:Q9SGE0
EnsemblPlants:AT1G08200.1 GeneID:837341 KEGG:ath:AT1G08200
TAIR:At1g08200 InParanoid:Q9SGE0 KO:K12449 OMA:RAFTDID
PhylomeDB:Q9SGE0 ProtClustDB:PLN02427 Genevestigator:Q9SGE0
Uniprot:Q9SGE0
Length = 389
Score = 86 (35.3 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEG-HYIIASDW--KKNEHMTEDMFCH-----EFH 74
P + + I + GAGGFI SH+ +L +E H ++A D K +H+ E +FH
Sbjct: 14 PIKPMTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVQWAGRIQFH 73
Query: 75 LVDLRVMDNCLK-VTKGVDHVFNLAA 99
++++ D+ L+ + K D NLAA
Sbjct: 74 RINIK-HDSRLEGLIKMADLTINLAA 98
Score = 58 (25.5 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 35/147 (23%), Positives = 62/147 (42%)
Query: 147 PEFKQLETNVSLKESDAWPAEPQD-AYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
PEF L+ ++S E Q +Y K E L + G+E + R N GP
Sbjct: 161 PEFYVLKEDIS--PCIFGSIEKQRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGP 218
Query: 206 FGTW----KGGREKAPAAF-C-RKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKS 259
+ G E P C L + ++ G R+F +I + +E VL + ++
Sbjct: 219 RMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIEN 278
Query: 260 DFREP---VNIGS-DEMVSMNEMAEIV 282
R N+G+ + V++ ++AE++
Sbjct: 279 PERANGHIFNVGNPNNEVTVRQLAEMM 305
Score = 52 (23.4 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 304 RNSDNTLIKEKLGWAPSMKLKDGLRIT 330
R D T+I +LGW P L D L T
Sbjct: 341 RIPDMTIINRQLGWNPKTSLWDLLEST 367
>UNIPROTKB|Q81V79 [details] [associations]
symbol:BA_0621 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 GenomeReviews:AE016879_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000034276
OMA:DYAVEIF RefSeq:NP_843152.1 RefSeq:YP_017248.1
ProteinModelPortal:Q81V79 SMR:Q81V79 DNASU:1087994
EnsemblBacteria:EBBACT00000011110 EnsemblBacteria:EBBACT00000017957
GeneID:1087994 GeneID:2814938 KEGG:ban:BA_0621 KEGG:bar:GBAA_0621
PATRIC:18778842 ProtClustDB:CLSK865117
BioCyc:BANT261594:GJ7F-674-MONOMER Uniprot:Q81V79
Length = 317
Score = 115 (45.5 bits), Expect = 0.00051, P = 0.00051
Identities = 60/270 (22%), Positives = 113/270 (41%)
Query: 28 RISVTGAGGFIASHIARRLKSE--GHYIIASDWKK--NEHMTEDMFCHEFHLVDLRVMDN 83
+I VTG+ G I S + +L+ +IA+D ++ +E +T F + D + + +
Sbjct: 3 KILVTGSLGQIGSELVMKLRDVYGASNVIATDIRETDSEVVTSGPF-ETLDVTDGQKLHD 61
Query: 84 CLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISF-NMLEASRISGVKRFFYASS 142
K + VD + +LAA + + + +N M N LEA+R K F +S
Sbjct: 62 IAKRNE-VDTIIHLAALLSATA---EKNPLFAWNLNMGGLVNALEAARELNCKFFTPSSI 117
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNI 202
P + T + P YG+ K+A E LC +Y + FG++ R RF +
Sbjct: 118 GAFGPSTPKDNTPQDTIQ------RPTTMYGVNKVAGELLCDYYHQKFGVDTRGVRFPGL 171
Query: 203 YGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFR 262
GG +A+ +G ++ + ++ ++ L ++D
Sbjct: 172 ISYVAPPGGGTTDYAVEIYYEAIKKGTYTSYIAEGTYM-DMMYMPDALQAIISLMEADPS 230
Query: 263 EPVNIGSDEMVSMN-EMAEIVLSFEDKKLP 291
+ V+ + + +M+ E +I S K +P
Sbjct: 231 KLVHRNAFNITAMSFEPEQIAASIR-KHIP 259
>TIGR_CMR|BA_0621 [details] [associations]
symbol:BA_0621 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
GO:GO:0044237 HOGENOM:HOG000034276 OMA:DYAVEIF RefSeq:NP_843152.1
RefSeq:YP_017248.1 ProteinModelPortal:Q81V79 SMR:Q81V79
DNASU:1087994 EnsemblBacteria:EBBACT00000011110
EnsemblBacteria:EBBACT00000017957 GeneID:1087994 GeneID:2814938
KEGG:ban:BA_0621 KEGG:bar:GBAA_0621 PATRIC:18778842
ProtClustDB:CLSK865117 BioCyc:BANT261594:GJ7F-674-MONOMER
Uniprot:Q81V79
Length = 317
Score = 115 (45.5 bits), Expect = 0.00051, P = 0.00051
Identities = 60/270 (22%), Positives = 113/270 (41%)
Query: 28 RISVTGAGGFIASHIARRLKSE--GHYIIASDWKK--NEHMTEDMFCHEFHLVDLRVMDN 83
+I VTG+ G I S + +L+ +IA+D ++ +E +T F + D + + +
Sbjct: 3 KILVTGSLGQIGSELVMKLRDVYGASNVIATDIRETDSEVVTSGPF-ETLDVTDGQKLHD 61
Query: 84 CLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISF-NMLEASRISGVKRFFYASS 142
K + VD + +LAA + + + +N M N LEA+R K F +S
Sbjct: 62 IAKRNE-VDTIIHLAALLSATA---EKNPLFAWNLNMGGLVNALEAARELNCKFFTPSSI 117
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNI 202
P + T + P YG+ K+A E LC +Y + FG++ R RF +
Sbjct: 118 GAFGPSTPKDNTPQDTIQ------RPTTMYGVNKVAGELLCDYYHQKFGVDTRGVRFPGL 171
Query: 203 YGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFR 262
GG +A+ +G ++ + ++ ++ L ++D
Sbjct: 172 ISYVAPPGGGTTDYAVEIYYEAIKKGTYTSYIAEGTYM-DMMYMPDALQAIISLMEADPS 230
Query: 263 EPVNIGSDEMVSMN-EMAEIVLSFEDKKLP 291
+ V+ + + +M+ E +I S K +P
Sbjct: 231 KLVHRNAFNITAMSFEPEQIAASIR-KHIP 259
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 108 (43.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 51/214 (23%), Positives = 91/214 (42%)
Query: 136 RFFYASSACIY---PEFKQLETNVSLK---ESDAWPAEPQDAYGLEKLASEELCKHYTKD 189
RF + S+ +Y P ++E +V+L E+ A+ P Y K +S+ L + + +
Sbjct: 127 RFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYA--PSSPYSASKASSDHLVRAWRRT 184
Query: 190 FGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC 249
+G+ V N YGP+ EK AL ++G G Q R + ++++
Sbjct: 185 YGLPTIVTNCSNNYGPYHF----PEKLIPLVILNALEGKP-LPIYGKGDQIRDWLYVEDH 239
Query: 250 VEGV-LRLTKSDFREPVNIGS-------DEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEG 300
+ + +T+ E NIG D + ++ ++ EIV + I ++ G
Sbjct: 240 ARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPG 299
Query: 301 VRGRNS-DNTLIKEKLGWAPSMKLKDGLRITYFW 333
R + D I +LGW P + G+R T W
Sbjct: 300 HDRRYAIDAGKISRELGWKPLETFESGIRKTVEW 333
Score = 48 (22.0 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 27 LRISVTGAGGFIASHIARRL 46
++I +TG GFI S + R +
Sbjct: 1 MKILITGGAGFIGSAVVRHI 20
>UNIPROTKB|Q06963 [details] [associations]
symbol:hldD "ADP-L-glycero-D-manno-heptose-6-epimerase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008712 "ADP-glyceromanno-heptose 6-epimerase activity"
evidence=ISS] [GO:0009244 "lipopolysaccharide core region
biosynthetic process" evidence=ISS] UniPathway:UPA00356
HAMAP:MF_01601 InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0050661 GO:GO:0009244 EMBL:X59554 GO:GO:0097171 KO:K03274
OMA:AVNLWFW ProtClustDB:PRK11150 GO:GO:0008712
PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547 EMBL:U47542
EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 114 (45.2 bits), Expect = 0.00064, P = 0.00064
Identities = 70/293 (23%), Positives = 116/293 (39%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHY-IIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCL-K 86
I VTG G I S+I + L G I+ D KN +++ + + D D+ L +
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGITDILVVDHLKNGRKFKNLV--DLQIADYMDRDDFLAQ 59
Query: 87 VTKGVDHVFNLAADMGGM--GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144
+ G D F A G + + +M NN S +L + F YASSA
Sbjct: 60 IMAGDDFGFIDAIFHEGACSATTEWDGKYVMLNNYEYSKELLHYCLDREIP-FLYASSAA 118
Query: 145 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHY-----TKDFGIECRVG-R 198
Y E T+ ++E A + YG K + + D + G R
Sbjct: 119 TYGE-----TDTFIEEPQYEGA--LNVYGYSKQQFDNYVRRLWLDAKQHDETLSQITGFR 171
Query: 199 FHNIYGPFGTWKGGREKAPAAF-CRKALTSTDKFEMW-GDGLQTRSFTFIDECVEGVLRL 256
+ N+YGP KG A AF + + + +++ G R F ++ + L
Sbjct: 172 YFNVYGPREQHKGSM--ASVAFHLNNQMNAGENPKLFAGSENFKRDFVYVGDVAAVNLWF 229
Query: 257 TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNT 309
N G+ + S NE+A+ V++F + + IP P+ ++G + T
Sbjct: 230 LDHGVSGIFNCGTGKAESFNEVAKAVIAFHGRG-EVETIPFPDHLKGAYQEFT 281
>TIGR_CMR|VC_0240 [details] [associations]
symbol:VC_0240 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 HAMAP:MF_01601 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 UniPathway:UPA00958
InterPro:IPR016040 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0050661 GO:GO:0009244 EMBL:X59554
GO:GO:0097171 KO:K03274 OMA:AVNLWFW ProtClustDB:PRK11150
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547
EMBL:U47542 EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 114 (45.2 bits), Expect = 0.00064, P = 0.00064
Identities = 70/293 (23%), Positives = 116/293 (39%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHY-IIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCL-K 86
I VTG G I S+I + L G I+ D KN +++ + + D D+ L +
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGITDILVVDHLKNGRKFKNLV--DLQIADYMDRDDFLAQ 59
Query: 87 VTKGVDHVFNLAADMGGM--GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144
+ G D F A G + + +M NN S +L + F YASSA
Sbjct: 60 IMAGDDFGFIDAIFHEGACSATTEWDGKYVMLNNYEYSKELLHYCLDREIP-FLYASSAA 118
Query: 145 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHY-----TKDFGIECRVG-R 198
Y E T+ ++E A + YG K + + D + G R
Sbjct: 119 TYGE-----TDTFIEEPQYEGA--LNVYGYSKQQFDNYVRRLWLDAKQHDETLSQITGFR 171
Query: 199 FHNIYGPFGTWKGGREKAPAAF-CRKALTSTDKFEMW-GDGLQTRSFTFIDECVEGVLRL 256
+ N+YGP KG A AF + + + +++ G R F ++ + L
Sbjct: 172 YFNVYGPREQHKGSM--ASVAFHLNNQMNAGENPKLFAGSENFKRDFVYVGDVAAVNLWF 229
Query: 257 TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNT 309
N G+ + S NE+A+ V++F + + IP P+ ++G + T
Sbjct: 230 LDHGVSGIFNCGTGKAESFNEVAKAVIAFHGRG-EVETIPFPDHLKGAYQEFT 281
>ASPGD|ASPL0000003882 [details] [associations]
symbol:AN6398 species:162425 "Emericella nidulans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:BN001301
GO:GO:0044237 ProteinModelPortal:C8V0N8
EnsemblFungi:CADANIAT00006581 OMA:KEEHDWR Uniprot:C8V0N8
Length = 280
Score = 113 (44.8 bits), Expect = 0.00065, P = 0.00065
Identities = 45/182 (24%), Positives = 76/182 (41%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDL-RVMDNCL 85
++I++TGA G + + GH + D + E + E D+ D +
Sbjct: 1 MKIAITGARGTVGRACVKLCSKAGHATVQID--RTEQDFDGTPNSEMRTADVANDYDAVV 58
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA-- 143
K KG D + +LAA +G + ++ NN +FN A+ G+ R YASS
Sbjct: 59 KAFKGCDALIHLAALPDPVG---KDDWMVHNNNVNAAFNGFHAAATLGINRVCYASSVNA 115
Query: 144 --CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF-GIECRVGRFH 200
Y + L+ + + +A P P D+Y L K +E + + F G+ R H
Sbjct: 116 VGLAYAN-RPLKFDYLPLDEEA-PQRPTDSYALAKEEAEAQARSFVNWFPGMNIACLRIH 173
Query: 201 NI 202
+
Sbjct: 174 EV 175
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 106 (42.4 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 62/267 (23%), Positives = 113/267 (42%)
Query: 92 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASR-----ISGVK----RFFYASS 142
D V +LAA+ I + + + N + ++ +LEA+R ++ K RF + S+
Sbjct: 75 DAVMHLAAESHVDRSI-TGPAAFIETNIVGTYVLLEAARNYWSALNDEKKKSFRFHHIST 133
Query: 143 ACIY---PEFKQLETNVSLK---ESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRV 196
+Y P + N +L E+ A+ P Y K +S+ L + + + +G+ V
Sbjct: 134 DEVYGDLPHPDEANNNEALPLFTETTAYA--PSSPYSASKASSDHLVRAWKRTYGLPTIV 191
Query: 197 GRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 256
N YGP+ EK AL ++G G Q R + ++++ + +
Sbjct: 192 TNCSNNYGPYHF----PEKLIPLVILNALEGK-ALPIYGKGDQIRDWLYVEDHARALYTV 246
Query: 257 -TKSDFREPVNIGS-------DEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEGVRGRNS- 306
T+ E NIG D ++++ ++ EIV + + I ++ G R +
Sbjct: 247 VTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAI 306
Query: 307 DNTLIKEKLGWAPSMKLKDGLRITYFW 333
D I +LGW P + G+R T W
Sbjct: 307 DADKISRELGWKPQETFESGIRKTVEW 333
Score = 49 (22.3 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 27 LRISVTGAGGFIASHIARRL 46
++I VTG GFI S + R +
Sbjct: 1 MKILVTGGAGFIGSAVVRHI 20
>ZFIN|ZDB-GENE-040722-1 [details] [associations]
symbol:tsta3 "tissue specific transplantation antigen
P35B" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-040722-1 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 GeneTree:ENSGT00390000004681 CTD:7264 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:AL929003 OMA:IRETCEW EMBL:BC086741
IPI:IPI00509474 RefSeq:NP_001008620.1 UniGene:Dr.83537
STRING:Q5SPD5 Ensembl:ENSDART00000057980 GeneID:494077
KEGG:dre:494077 InParanoid:Q5SPD5 NextBio:20865585 Uniprot:Q5SPD5
Length = 318
Score = 113 (44.8 bits), Expect = 0.00085, P = 0.00085
Identities = 63/315 (20%), Positives = 128/315 (40%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
+R+ VTG G + I R +K EG +W ++ E + + + +
Sbjct: 5 MRVLVTGGSGLVGRAIERVVK-EGEGREGEEWIFLSSKDANLLSPE----ETKAVFEKHR 59
Query: 87 VTKGVDHVFNLAADMGGMGFIQSNHSVIMY-NNTMISFNMLEASRISGVKRFFYASSACI 145
T HV +LAA +GG+ F ++ + +N I+ N+L+A+ SGV + S CI
Sbjct: 60 PT----HVIHLAAMVGGL-FRNMRQNLDFWRSNVFINDNVLQAAHDSGVVKVVSCLSTCI 114
Query: 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
+P+ + ++ + P E Y K + + + + F N++G
Sbjct: 115 FPDKTTYPIDETMIHNGP-PHESNFGYAYAKRMIDVQNRAFFQQFNRRYTAVIPTNVFGC 173
Query: 206 FGTWK-GGREKAPAAFCRKALTSTD--KFEMWGDGLQTRSFTF-IDECVEGVLRLTKSDF 261
+ P + + + +WG G R F + +D V L + D
Sbjct: 174 HDNFNIEDGHVLPGLIHKTYIAKKEGKPLVVWGSGRPLRQFIYSLDLARLFVWVLREYDE 233
Query: 262 REPV--NIGSDEMVSMNEMAEIVL-SFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWA 318
EP+ ++G ++ +S+ + A+ V+ + E I+ +G + + N +++ L
Sbjct: 234 VEPIILSVGEEDELSIKDAADAVVEALEFTGDVIYDTSKADGQFKKTASNAKLRKYLPDF 293
Query: 319 PSMKLKDGLRITYFW 333
++ ++ T W
Sbjct: 294 KFTPFREAIKETCDW 308
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 375 375 0.00088 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 143
No. of states in DFA: 620 (66 KB)
Total size of DFA: 267 KB (2141 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 29.97u 0.09s 30.06t Elapsed: 00:00:14
Total cpu time: 30.01u 0.09s 30.10t Elapsed: 00:00:15
Start: Fri May 10 20:01:18 2013 End: Fri May 10 20:01:33 2013
WARNINGS ISSUED: 1