BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017186
(375 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A3C4S4|GME1_ORYSJ GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. japonica
GN=GME-1 PE=1 SV=1
Length = 378
Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/378 (93%), Positives = 366/378 (96%), Gaps = 3/378 (0%)
Query: 1 MGSTE--GT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASD 57
MGS+E GT YG YTY ELERE YWPSEKLRIS+TGAGGFI SHIARRLKSEGHYIIASD
Sbjct: 1 MGSSEKNGTAYGEYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHYIIASD 60
Query: 58 WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN 117
WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT GVDHVFNLAADMGGMGFIQSNHSVIMYN
Sbjct: 61 WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNGVDHVFNLAADMGGMGFIQSNHSVIMYN 120
Query: 118 NTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL 177
NTMISFNMLEA+RI+GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL
Sbjct: 121 NTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL 180
Query: 178 ASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDG 237
A+EELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKA TSTD+FEMWGDG
Sbjct: 181 ATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDG 240
Query: 238 LQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG 297
LQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEI+LSFED++LPIHHIPG
Sbjct: 241 LQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPG 300
Query: 298 PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVV 357
PEGVRGRNSDNTLIKEKLGWAP+MKLKDGLR TYFWIKEQIEKEKTQG+D++ YGSSKVV
Sbjct: 301 PEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKTQGVDIAGYGSSKVV 360
Query: 358 GTQAPVQLGSLRAADGKE 375
TQAPVQLGSLRAADGKE
Sbjct: 361 STQAPVQLGSLRAADGKE 378
>sp|A2Z7B3|GME1_ORYSI GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. indica
GN=OsI_032456 PE=2 SV=1
Length = 378
Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/378 (93%), Positives = 365/378 (96%), Gaps = 3/378 (0%)
Query: 1 MGSTE--GT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASD 57
MGS+E GT YG YTY ELERE YWPSEKLRIS+TGAGGFI SHIARRLKSEGHYIIASD
Sbjct: 1 MGSSEKNGTAYGEYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHYIIASD 60
Query: 58 WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN 117
WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT VDHVFNLAADMGGMGFIQSNHSVIMYN
Sbjct: 61 WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNSVDHVFNLAADMGGMGFIQSNHSVIMYN 120
Query: 118 NTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL 177
NTMISFNMLEA+RI+GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL
Sbjct: 121 NTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL 180
Query: 178 ASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDG 237
A+EELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKA TSTD+FEMWGDG
Sbjct: 181 ATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDG 240
Query: 238 LQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG 297
LQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEI+LSFED++LPIHHIPG
Sbjct: 241 LQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPG 300
Query: 298 PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVV 357
PEGVRGRNSDNTLIKEKLGWAP+MKLKDGLR TYFWIKEQIEKEKTQG+D++ YGSSKVV
Sbjct: 301 PEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKTQGVDIAGYGSSKVV 360
Query: 358 GTQAPVQLGSLRAADGKE 375
TQAPVQLGSLRAADGKE
Sbjct: 361 STQAPVQLGSLRAADGKE 378
>sp|Q2R1V8|GME2_ORYSJ GDP-mannose 3,5-epimerase 2 OS=Oryza sativa subsp. japonica
GN=GME-2 PE=2 SV=2
Length = 371
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/365 (94%), Positives = 358/365 (98%)
Query: 11 YTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFC 70
YTY ELE+EPYWP EKLRIS+TGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFC
Sbjct: 7 YTYVELEKEPYWPFEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFC 66
Query: 71 HEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASR 130
HEFHLVDLRVMDNCLKVT GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEA+R
Sbjct: 67 HEFHLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAAR 126
Query: 131 ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF 190
I+GVKRFFYASSACIYPEFKQL+T VSLKESDAWPAEPQDAYGLEKLA+EELCKHYTKDF
Sbjct: 127 INGVKRFFYASSACIYPEFKQLDTVVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF 186
Query: 191 GIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 250
GIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTD+FEMWGDGLQTRSFTFIDECV
Sbjct: 187 GIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDRFEMWGDGLQTRSFTFIDECV 246
Query: 251 EGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTL 310
EGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFE+K+LPIHHIPGPEGVRGRNSDNTL
Sbjct: 247 EGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKQLPIHHIPGPEGVRGRNSDNTL 306
Query: 311 IKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVGTQAPVQLGSLRA 370
IKEKLGWAP+M+LKDGLRITYFWIKEQ+EKEK +G+DLS YGSSKVV TQAPVQLGSLRA
Sbjct: 307 IKEKLGWAPTMRLKDGLRITYFWIKEQLEKEKAEGVDLSAYGSSKVVQTQAPVQLGSLRA 366
Query: 371 ADGKE 375
ADGKE
Sbjct: 367 ADGKE 371
>sp|Q93VR3|GME_ARATH GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana GN=At5g28840 PE=1
SV=1
Length = 377
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/377 (90%), Positives = 365/377 (96%), Gaps = 2/377 (0%)
Query: 1 MGSTEGT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWK 59
MG+T GT YGAYTY+ELERE YWPSE L+IS+TGAGGFIASHIARRLK EGHY+IASDWK
Sbjct: 1 MGTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWK 60
Query: 60 KNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 119
KNEHMTEDMFC EFHLVDLRVM+NCLKVT+GVDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61 KNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
Query: 120 MISFNMLEASRISGVKRFFYASSACIYPEFKQLET-NVSLKESDAWPAEPQDAYGLEKLA 178
MISFNM+EA+RI+G+KRFFYASSACIYPEFKQLET NVSLKESDAWPAEPQDAYGLEKLA
Sbjct: 121 MISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLA 180
Query: 179 SEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGL 238
+EELCKHY KDFGIECR+GRFHNIYGPFGTWKGGREKAPAAFCRKA TSTD+FEMWGDGL
Sbjct: 181 TEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGL 240
Query: 239 QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP 298
QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAE+VLSFE+KKLPIHHIPGP
Sbjct: 241 QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGP 300
Query: 299 EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVG 358
EGVRGRNSDN LIKEKLGWAP+M+LK+GLRITYFWIKEQIEKEK +G D+S+YGSSKVVG
Sbjct: 301 EGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYGSSKVVG 360
Query: 359 TQAPVQLGSLRAADGKE 375
TQAPVQLGSLRAADGKE
Sbjct: 361 TQAPVQLGSLRAADGKE 377
>sp|Q6GMI9|UXS1_DANRE UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2
SV=2
Length = 418
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 155/327 (47%), Gaps = 25/327 (7%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 85 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 144
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 145 E---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 199
Query: 142 SACIY--PEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
++ +Y PE V + D W P P+ Y K +E +C Y K G+E R
Sbjct: 200 TSEVYGDPE-------VHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 252
Query: 196 VGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 255
V R N +G GR + F +AL + ++G G QTR+F ++ + V G++
Sbjct: 253 VARIFNTFGSRMHMNDGR--VVSNFILQALQG-EALTVYGSGSQTRAFQYVSDLVNGLVS 309
Query: 256 LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEK 314
L S+ PVN+G+ E ++ E A+++ S + I +P + + R D K
Sbjct: 310 LMNSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLL 369
Query: 315 LGWAPSMKLKDGLRITYFWIKEQIEKE 341
LGW P + L++GL T + ++E +
Sbjct: 370 LGWEPVVPLEEGLNKTIQYFSRELEHQ 396
>sp|Q5PQX0|UXS1_RAT UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1
PE=1 SV=1
Length = 420
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 154/325 (47%), Gaps = 25/325 (7%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 E---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIY--PEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
++ +Y PE V + D W P P+ Y K +E +C Y K G+E R
Sbjct: 202 TSEVYGDPE-------VHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 254
Query: 196 VGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 255
V R N +GP GR + F +AL + ++G G QTR+F ++ + V G++
Sbjct: 255 VARIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVA 311
Query: 256 LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEK 314
L S+ PVN+G+ E ++ E A+++ + I + + + R D K
Sbjct: 312 LMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLM 371
Query: 315 LGWAPSMKLKDGLRITYFWIKEQIE 339
LGW P + L++GL + ++++E
Sbjct: 372 LGWEPVVPLEEGLNKAIHYFRKELE 396
>sp|Q8NBZ7|UXS1_HUMAN UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1
SV=1
Length = 420
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 154/325 (47%), Gaps = 25/325 (7%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 E---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIY--PEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
++ +Y PE V + D W P P+ Y K +E +C Y K G+E R
Sbjct: 202 TSEVYGDPE-------VHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 254
Query: 196 VGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 255
V R N +GP GR + F +AL + ++G G QTR+F ++ + V G++
Sbjct: 255 VARIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVA 311
Query: 256 LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEK 314
L S+ PVN+G+ E ++ E A+++ + I + + + R D K
Sbjct: 312 LMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLM 371
Query: 315 LGWAPSMKLKDGLRITYFWIKEQIE 339
LGW P + L++GL + ++++E
Sbjct: 372 LGWEPVVPLEEGLNKAIHYFRKELE 396
>sp|Q91XL3|UXS1_MOUSE UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2
SV=1
Length = 420
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 154/325 (47%), Gaps = 25/325 (7%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 E---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIY--PEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
++ +Y PE V + D W P P+ Y K +E +C Y K G+E R
Sbjct: 202 TSEVYGDPE-------VHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 254
Query: 196 VGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 255
V R N +GP GR + F +AL + ++G G QTR+F ++ + V G++
Sbjct: 255 VARIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVA 311
Query: 256 LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEK 314
L S+ PVN+G+ E ++ E A+++ + I + + + R D K
Sbjct: 312 LMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLM 371
Query: 315 LGWAPSMKLKDGLRITYFWIKEQIE 339
LGW P + L++GL + ++++E
Sbjct: 372 LGWEPVVPLEEGLNKAIHYFRKELE 396
>sp|Q5R885|UXS1_PONAB UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2
SV=1
Length = 420
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 154/325 (47%), Gaps = 25/325 (7%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 E---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIY--PEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
++ +Y PE V + D W P P+ Y K +E +C Y K G+E R
Sbjct: 202 TSEVYGDPE-------VHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 254
Query: 196 VGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 255
V R N +GP GR + F +AL + ++G G QTR+F ++ + V G++
Sbjct: 255 VARIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVA 311
Query: 256 LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEK 314
L S+ PVN+G+ E ++ E A+++ + I + + + R D K
Sbjct: 312 LMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLM 371
Query: 315 LGWAPSMKLKDGLRITYFWIKEQIE 339
LGW P + L++GL + ++++E
Sbjct: 372 LGWEPVVPLEEGLNKAIHYFRKELE 396
>sp|Q6DF08|UXS1_XENTR UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1
PE=2 SV=1
Length = 421
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 155/327 (47%), Gaps = 25/327 (7%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 88 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 147
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 148 E---PLYIEVDQIYHLASPASPPNYM-YNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 202
Query: 142 SACIY--PEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
++ +Y PE V + + W P P+ Y K +E +C Y K G+E R
Sbjct: 203 TSEVYGDPE-------VHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 255
Query: 196 VGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 255
V R N +GP GR + F +AL ++ ++G G QTR+F ++ + V G++
Sbjct: 256 VARIFNTFGPRMHMNDGR--VVSNFILQALQG-EQLTVYGSGEQTRAFQYVSDLVNGLVA 312
Query: 256 LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEK 314
L S+ PVN+G+ + S+ + A ++ I + + + R D K
Sbjct: 313 LMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSEAQDDPQRRKPDIRKAKLL 372
Query: 315 LGWAPSMKLKDGLRITYFWIKEQIEKE 341
LGW P + L++GL T + ++++E +
Sbjct: 373 LGWEPVVPLEEGLNKTIHYFRKELEHQ 399
>sp|O34886|YTCB_BACSU Uncharacterized UDP-glucose epimerase YtcB OS=Bacillus subtilis
(strain 168) GN=ytcB PE=3 SV=1
Length = 316
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 144/320 (45%), Gaps = 37/320 (11%)
Query: 27 LRISVTGAGGFIASHIARRL-KSEGHYIIASD------------WKKNEHMTEDMFCHEF 73
++I VTGA GFI SH+ L K + H +I D + E F F
Sbjct: 1 MKILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKNLLPEKRFT--F 58
Query: 74 HLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG 133
+L D + +GVD +F+LAA G ++ +N +LEA R
Sbjct: 59 IKENLLTAD-LASLLEGVDVIFHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEACREHS 117
Query: 134 VKRFFYASSACIYPEFK-QLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGI 192
++ F +AS++ +Y E + ++ N SL P YG+ KL E+LC Y + FGI
Sbjct: 118 IQTFVFASTSSVYGEKQGKVSENTSL--------SPLSPYGVTKLTGEKLCHVYKQSFGI 169
Query: 193 ECRVGRFHNIYGPFGTWKGGREKAPAAFCR--KALTSTDKFEMWGDGLQTRSFTFIDECV 250
+ RF +YGP R++ AF R K ++GDG Q+R FT+I +CV
Sbjct: 170 PIVILRFFTVYGP-------RQRPDMAFHRLIKQHLQQKPLTIFGDGQQSRDFTYISDCV 222
Query: 251 EGVLRLTKSD--FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRN-SD 307
+G+ + E VNIG E S+ ++ ++ +K +H G +D
Sbjct: 223 KGITAVLGKPHLIGETVNIGGAERASVLKVVSLIEDISGRKATLHFSDKIAGEPSNTWAD 282
Query: 308 NTLIKEKLGWAPSMKLKDGL 327
+ K+ L + P+ LKDGL
Sbjct: 283 ISKAKQLLHYDPATSLKDGL 302
>sp|P55353|Y4AF_RHISN Uncharacterized protein y4aF OS=Rhizobium sp. (strain NGR234)
GN=NGR_a00420 PE=3 SV=1
Length = 314
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 142/321 (44%), Gaps = 27/321 (8%)
Query: 20 PYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLR 79
P + + RI V G G + S I R L SE +I +D +K + +T +F L
Sbjct: 2 PMYLLDGKRIWVAGHKGMVGSAIIRSLASEDCEVIVADRQKLD-LTRQEEVEKFLL---- 56
Query: 80 VMDNCLKVTKGVDH-VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138
K H V AA +GG+ + + +Y N ++ N++E S SGV++
Sbjct: 57 ---------KEKPHAVIMAAAKVGGILANDTMPADFIYQNLIMEANVIEGSFRSGVEKLL 107
Query: 139 YASSACIYPEFKQLETNVSLKESDAWPAEPQDA-YGLEKLASEELCKHYTKDFGIECRVG 197
+ S+CIYP++ + + P EP + Y + K+A +LC+ Y K +G
Sbjct: 108 FLGSSCIYPKYAA--QPIREEALLTGPLEPTNEWYAIAKIAGIKLCQAYRKQYGANFISA 165
Query: 198 RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDK----FEMWGDGLQTRSFTFIDECVEGV 253
N+YGP + A RKA + K +WG G TR F + ++C + +
Sbjct: 166 MPTNLYGPRDKFDLNSSHVVPALIRKAHEAKIKDLGCLSIWGSGTPTRDFLYSEDCSDAL 225
Query: 254 LRLTKS-DFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPI-HHIPGPEGV-RGRNSDNTL 310
+ L K E +NIGS +S+ E+A IV K I P+G R S L
Sbjct: 226 VFLLKHYSETEHINIGSGGEISIIELAHIVCRVVGFKGDIVFDTSKPDGTPRKLLSSERL 285
Query: 311 IKEKLGWAPSMKLKDGLRITY 331
+ +GW P L+ GL +Y
Sbjct: 286 V--SMGWRPKTSLELGLAKSY 304
>sp|Q57664|GALE_METJA Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0211 PE=3 SV=1
Length = 305
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 144/317 (45%), Gaps = 24/317 (7%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT 88
I VTG GFI SHI +L + +I D + EF D+R D K+
Sbjct: 2 ILVTGGAGFIGSHIVDKLIENNYDVIILDNLTTGNKNNINPKAEFVNADIRDKDLDEKIN 61
Query: 89 -KGVDHVFNLAADMGGMGFIQSNHSVIMYN---NTMISFNMLEASRISGVKRFFYASSA- 143
K V+ V + AA + +++ +Y+ N + + N+LE R + + +ASS
Sbjct: 62 FKDVEVVIHQAAQINVRNSVENP----VYDGDINVLGTINILEMMRKYDIDKIVFASSGG 117
Query: 144 CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIY 203
+Y E L + + P P YGL K EE K Y + +GIE + R+ N+Y
Sbjct: 118 AVYGEPNYLPVD------ENHPINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNVY 171
Query: 204 GPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFRE 263
G K G + F K L + ++GDG QTR F ++ + + L + + E
Sbjct: 172 GERQDPK-GEAGVISIFIDKMLKNQSPI-IFGDGNQTRDFVYVGDVAKANL-MALNWKNE 228
Query: 264 PVNIGSDEMVSMNEMAEIV---LSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPS 320
VNIG+ + S+NE+ +I+ + F + I+ P EG R + E LGW P
Sbjct: 229 IVNIGTGKETSVNELFDIIKHEIGFRGE--AIYDKP-REGEVYRIYLDIKKAESLGWKPE 285
Query: 321 MKLKDGLRITYFWIKEQ 337
+ LK+G++ W+K
Sbjct: 286 IDLKEGIKRVVNWMKNN 302
>sp|Q67WR5|FCL2_ORYSJ Putative GDP-L-fucose synthase 2 OS=Oryza sativa subsp. japonica
GN=Os06g0652300 PE=3 SV=1
Length = 347
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 123/253 (48%), Gaps = 10/253 (3%)
Query: 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRFFYASSACIYPEFKQ 151
+V AA +GG+ + + + N I+ N+++A+R G V++ +S+ IYP
Sbjct: 89 YVILAAAKVGGVHASSAAPAEYLTENLRITVNVVDAARRCGSVRKLLVLASSTIYPADAP 148
Query: 152 LETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG 211
T S + PAE + Y + K+A ++C+ ++G++ +N+YGP +
Sbjct: 149 QPTPESALLTGP-PAEGSEWYAIPKIAGIKMCQAVRAEYGLDAIAAAPNNLYGPRHPFPP 207
Query: 212 GREKAPAA----FCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT-KSDFREPVN 266
A F R L + +WG G R FT +D+ E V+ L + E VN
Sbjct: 208 EHSHVIPALIRRFHRAKLEGAGEVAVWGSGAAAREFTHVDDLAEAVVVLMERYSGEEHVN 267
Query: 267 IGSDEMVSMNEMAEIVLSFEDKKLPIH-HIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKD 325
+GS E V++ E+AE V + + PEGV R D+ ++ KLGW P + L+D
Sbjct: 268 VGSGEEVTVRELAEAVRGVVGYEGVVAWDAARPEGVARRVVDSGRMR-KLGWEPRVALRD 326
Query: 326 GLRITY-FWIKEQ 337
G++ Y F+++ +
Sbjct: 327 GIQDLYRFYLRHE 339
>sp|Q9LMU0|FCL2_ARATH Putative GDP-L-fucose synthase 2 OS=Arabidopsis thaliana GN=GER2
PE=2 SV=1
Length = 328
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 145/340 (42%), Gaps = 26/340 (7%)
Query: 12 TYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCH 71
T E++ + + +I V G G + S I R+L+ +G + +T
Sbjct: 5 TGSEMKSGSFMLEKSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLRTHSELDLTSQSDVE 64
Query: 72 EFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRI 131
F + V +V AA +GG+ + + + N I N++ ++
Sbjct: 65 SFFATEKPV------------YVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYT 112
Query: 132 SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA-YGLEKLASEELCKHYTKDF 190
GVK+ + S+CIYP+F S + P EP + Y + K+A ++C+ Y
Sbjct: 113 HGVKKLLFLGSSCIYPKFAPQPIPESALLTG--PLEPTNEWYAIAKIAGIKMCQAYRLQH 170
Query: 191 GIECRVGRFHNIYGPFGTWKGGREKAPAAFCRK----ALTSTDKFEMWGDGLQTRSFTFI 246
+ G N+YG + A R+ + D+ +WG G R F +
Sbjct: 171 QWDAISGMPTNLYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHV 230
Query: 247 DECVEG-VLRLTKSDFREPVNIGSDEMVSMNEMAEIV---LSFEDKKLPIHHIPGPEGVR 302
D+ + V + + E VN+GS V++ E+AE+V + F+ K + P+G
Sbjct: 231 DDLADACVFLMDQYSGFEHVNVGSGVEVTIKELAELVKEVVGFKGKL--VWDTTKPDGTP 288
Query: 303 GRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEK 342
+ D++ + LGW P + LKDGL TY W E + ++K
Sbjct: 289 RKLMDSSKLAS-LGWTPKISLKDGLSQTYEWYLENVVQKK 327
>sp|O49213|FCL1_ARATH GDP-L-fucose synthase 1 OS=Arabidopsis thaliana GN=GER1 PE=1 SV=3
Length = 323
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 138/325 (42%), Gaps = 36/325 (11%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
+I V G G + S I R+L+ +G + +T F + V
Sbjct: 18 KIFVAGHRGLVGSAIVRKLQEQGFTNLVLKTHAELDLTRQADVESFFSQEKPV------- 70
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147
+V AA +GG+ + + + N I N++ ++ GVK+ + S+CIYP
Sbjct: 71 -----YVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYEHGVKKLLFLGSSCIYP 125
Query: 148 EF------KQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
+F + SL+ ++ W Y + K+A + C+ Y G + G N
Sbjct: 126 KFAPQPIPESALLTASLEPTNEW-------YAIAKIAGIKTCQAYRIQHGWDAISGMPTN 178
Query: 202 IYGPFGTWKGGREKAPAAFCRK----ALTSTDKFEMWGDGLQTRSFTFIDECVEG-VLRL 256
+YGP + A R+ + ++ +WG G R F +D+ + V L
Sbjct: 179 LYGPNDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLL 238
Query: 257 TKSDFREPVNIGSDEMVSMNEMAEI---VLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKE 313
+ E VNIGS + V++ E+AE+ V+ FE K P+G + D++ +
Sbjct: 239 DRYSGLEHVNIGSGQEVTIRELAELVKEVVGFEGKLG--WDCTKPDGTPRKLMDSSKLA- 295
Query: 314 KLGWAPSMKLKDGLRITYFWIKEQI 338
LGW P + L+DGL TY W + +
Sbjct: 296 SLGWTPKVSLRDGLSQTYDWYLKNV 320
>sp|Q331Q7|GERKI_STRSQ dTDP-4-dehydro-6-deoxyglucose reductase OS=Streptomyces sp.
GN=gerKI PE=1 SV=1
Length = 326
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 139/318 (43%), Gaps = 17/318 (5%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIA-SDWKKNEHMTEDMFCHEFHLVDLRVMDNC--- 84
+ VTGA GFI SH R+L + G ++A ++ E E + LV + D
Sbjct: 11 VLVTGALGFIGSHFVRQLDARGAEVLALYRTERPEIQAELAALNRVRLVRTELRDESDVR 70
Query: 85 ---LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ +D V + AA G F + I+ +N N+L R GV S
Sbjct: 71 GAFKYLAPSIDTVVHCAAMDGNAQFKLERSAEILDSNQRTISNLLNCVRDFGVGEVVVMS 130
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQ---DAYGLEKLASEELCKHYTKDFGIECRVGR 198
S+ +Y V+ +E D + + + Y L K E L + + + FG + R
Sbjct: 131 SSELY----SASPTVAAREEDDFRRSMRYTDNGYVLSKTYGEILARLHREQFGTNVFLVR 186
Query: 199 FHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 258
N+YGP + R + + KA + ++ E+WGDG QTRSF + + V LRL +
Sbjct: 187 PGNVYGPGDGFDCSRGRVIPSMLAKA-DAGEEIEIWGDGSQTRSFVHVADLVRASLRLLE 245
Query: 259 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG-PEGVRGRNSDNTLIKEKLGW 317
+ +N+ E VS+ E+A +V++ + I P P G R D + + E + +
Sbjct: 246 TGKYPEMNVAGAEQVSILELAGMVMAVLGRPERIRLDPSRPVGAPSRLLDLSRMSEVIDF 305
Query: 318 APSMKLKDGLRITYFWIK 335
P L+ GL T W +
Sbjct: 306 DPQ-PLRAGLEETARWYR 322
>sp|P32055|FCL_ECOLI GDP-L-fucose synthase OS=Escherichia coli (strain K12) GN=fcl PE=1
SV=2
Length = 321
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 140/331 (42%), Gaps = 31/331 (9%)
Query: 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCL 85
K R+ + G G + S I R+L+ G + + ++ + H+F
Sbjct: 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFF----------- 51
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145
++ +D V+ AA +GG+ + + +Y N MI N++ A+ + V + + S+CI
Sbjct: 52 -ASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCI 110
Query: 146 YPEF-KQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG 204
YP+ KQ L + P + Y + K+A +LC+ Y + +G + R N+YG
Sbjct: 111 YPKLAKQPMAESELLQGTLEPT--NEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYG 168
Query: 205 PFGTWKGGREKAPAAFCRKALTSTDK----FEMWGDGLQTRSFTFIDECVEG---VLRLT 257
P + A R+ +T + +WG G R F +D+ V+ L
Sbjct: 169 PHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVMELA 228
Query: 258 KSDFREP-------VNIGSDEMVSMNEMAEIVLSFED-KKLPIHHIPGPEGVRGRNSDNT 309
+ E +N+G+ ++ E+A+ + K + P+G + D T
Sbjct: 229 HEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVT 288
Query: 310 LIKEKLGWAPSMKLKDGLRITYFWIKEQIEK 340
+ +LGW + L+ GL TY W E ++
Sbjct: 289 RL-HQLGWYHEISLEAGLASTYQWFLENQDR 318
>sp|Q67WR2|FCL1_ORYSJ Probable GDP-L-fucose synthase 1 OS=Oryza sativa subsp. japonica
GN=Os06g0652400 PE=2 SV=1
Length = 328
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 142/327 (43%), Gaps = 31/327 (9%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
++ V G G + S I R L S G + +T F +L
Sbjct: 20 KVFVAGHRGLVGSAILRHLVSLGFTNVVVRTHAELDLTRQSDVEAFFAAELP-------- 71
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRFFYASSACIY 146
+V AA +GG+ + + + N I N+++A+ G V++ + S+CIY
Sbjct: 72 ----RYVVLAAAKVGGIHANSTFPADFIAANLQIQTNVVDAALKCGSVRKLLFLGSSCIY 127
Query: 147 PEF--KQLETNVSLKESDAWPAEPQDA-YGLEKLASEELCKHYTKDFGIECRVGRFHNIY 203
P+F + + N L + P EP + Y + K+A ++C+ Y G + N+Y
Sbjct: 128 PKFAPQPIPENSLL----SGPLEPTNEWYAVAKIAGIKMCQAYRIQHGFDAISAMPTNLY 183
Query: 204 GPFGTWKGGREKAPAAFCRK----ALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKS 259
GP + A R+ ++ + +WG G R F +D+ + V+ L
Sbjct: 184 GPQDNFHPENSHVLPALIRRFHEAKASNAAEVVVWGTGSPLREFLHVDDLADAVIFLMDH 243
Query: 260 -DFREPVNIGSDEMVSMNEMAEIV---LSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKL 315
E VN+GS V++ E+AE+V + F+ K + P+G + D++ I+E +
Sbjct: 244 YSGLEHVNVGSGSEVTIKELAELVKEVVGFQGKL--VWDSSKPDGTPRKLMDSSKIQE-M 300
Query: 316 GWAPSMKLKDGLRITYFWIKEQIEKEK 342
GW P + LK+GL TY W E + K
Sbjct: 301 GWKPKVPLKEGLVETYKWYVENVISAK 327
>sp|P39858|CAPI_STAAU Protein CapI OS=Staphylococcus aureus GN=capI PE=3 SV=1
Length = 334
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 114/244 (46%), Gaps = 24/244 (9%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH---MTEDMF------CHEFHLVD 77
++I +TG GFI SH+A++L +GHY+I D + + + ED F+ V
Sbjct: 1 MKILITGTAGFIGSHLAKKLIKQGHYVIGVDSINDYYSVSLKEDRLKSIGKENFTFNKVK 60
Query: 78 LRVMDNCLK--VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISF-NMLEASRISGV 134
L D+ K V + + V NLAA G I++ + I ++ ++ F N+LE SR +
Sbjct: 61 LENYDDLSKVFVDEQPEVVVNLAAQAGVRYSIENPRTYI--DSNIVGFMNILECSRHFNI 118
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
+ YASS+ +Y T+ SD P Y K ++E + Y+ + +
Sbjct: 119 QNLIYASSSSVY----GANTSKPFSTSDNI-DHPLSLYAATKKSNELMAHTYSHLYNLPT 173
Query: 195 RVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVL 254
RF +YGP W GR KA+ + +++ G R FT++D+ VE +
Sbjct: 174 TGLRFFTVYGP---W--GRPDMALFKFTKAIVNDQAIDVYNHGNMMRDFTYVDDIVEAIS 228
Query: 255 RLTK 258
RL K
Sbjct: 229 RLVK 232
>sp|O22141|GAE4_ARATH UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1
SV=1
Length = 437
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 155/368 (42%), Gaps = 58/368 (15%)
Query: 7 TYGAYTYEELEREPYWPSEKLRIS--------VTGAGGFIASHIARRLKSEGHYIIASD- 57
TYG +E+ R S ++R S VTGA GF+ +H++ LK G +I D
Sbjct: 73 TYGGPAWEKRLRS----SARIRTSTNNGITVLVTGAAGFVGTHVSAALKRRGDGVIGLDN 128
Query: 58 ---------WKKNEHMTE--DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGF 106
+ + E +F E + D+ ++ K+ HV +LAA G+ +
Sbjct: 129 FNDYYDPSLKRARRALLERSGIFIVEGDINDVELLRKLFKIV-SFTHVMHLAAQ-AGVRY 186
Query: 107 IQSNHSVIMYNNTMISFNMLEASR-ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWP 165
N S +++N N+LE + ++ +ASS+ +Y L T V E D
Sbjct: 187 AMENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASSSSVY----GLNTKVPFSEKDK-T 241
Query: 166 AEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAL 225
+P Y K A EE+ Y +G+ RF +YGP W GR F K +
Sbjct: 242 DQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGP---W--GRPDMAYFFFTKDI 296
Query: 226 ---TSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKS---------DFREPV-----NIG 268
S FE G R FT+ID+ V+G L + R P N+G
Sbjct: 297 LKGKSISIFESANHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGGKKRGPAQLRVFNLG 356
Query: 269 SDEMVSMNEMAEIV---LSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKD 325
+ V ++++ I+ L + KK I +P V +++ +L + +LG+ P+ L+
Sbjct: 357 NTSPVPVSDLVRILERQLKVKAKKNLI-KMPRNGDVPFTHANISLAQRELGYKPTTDLQT 415
Query: 326 GLRITYFW 333
GL+ W
Sbjct: 416 GLKKFVRW 423
>sp|Q04871|YCL2_ECO11 Uncharacterized 37.6 kDa protein in cld 5'region OS=Escherichia
coli O111:H- PE=3 SV=1
Length = 334
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 145/347 (41%), Gaps = 54/347 (15%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASD-----------WKKNEHMTEDMFCHEFHL 75
++ VTGA GFI H+++RL GH ++ D + E + + F +FH
Sbjct: 1 MKYLVTGAAGFIGFHVSKRLLEAGHQVVGIDNLNDYYDVSLKQARLELLAQPGF--QFHK 58
Query: 76 VDLRVMDNC--LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG 133
+DL + L + + VF + +++ H+ N T N+LE R +
Sbjct: 59 IDLADREGMTDLFASGHFERVFISPHRLAVRYSLENPHAYADSNLTGF-LNILEGCRHNK 117
Query: 134 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
++ YASS+ +Y +++ + +D P Y K A+E + Y+ +G+
Sbjct: 118 IQHLLYASSSSVYGLNRKMPFS-----TDDSVDHPVSLYAATKKANELMAHTYSHLYGLP 172
Query: 194 CRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV 253
RF +YGP W GR KA+ +++ G R FT+ID+ E +
Sbjct: 173 ATGLRFFTVYGP---W--GRPDMALFKFTKAMLEGKSIDVYNYGKMKRDFTYIDDIAEAI 227
Query: 254 LRL----------------TKSDFREP---VNIGSD---EMVSMNEMAEIVLSFEDKK-- 289
+RL T + P NIG+ E++ + E L E KK
Sbjct: 228 IRLQDVIPHADTQWTVETGTPAASIAPYRVYNIGNSSPVELMDYIQALEDALGIEAKKNM 287
Query: 290 LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKE 336
LP+ P V ++D + E +G+ P +KDG++ W ++
Sbjct: 288 LPLQ----PGDVLETSADTKALYEVIGFTPETTVKDGVKNFVNWYRD 330
>sp|O54067|LPSL_RHIME UDP-glucuronate 5'-epimerase OS=Rhizobium meliloti (strain 1021)
GN=lspL PE=3 SV=2
Length = 341
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 143/352 (40%), Gaps = 48/352 (13%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASD---------WKKNEHM----TEDMFCHEF 73
+R +TG GFI H+A+RL EGH+++ D K+ H +
Sbjct: 1 MRYLITGTAGFIGFHVAKRLIDEGHFVVGFDGMTPYYDVTLKERRHAILQRSNGFKAVTA 60
Query: 74 HLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG 133
L D +D ++ + + + +LAA G+ + N + N + S+NMLE ++
Sbjct: 61 MLEDRAALDRAAELAEP-EVIIHLAAQ-AGVRYSLENPKAYVDANLVGSWNMLELAKAIA 118
Query: 134 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
K AS++ IY + E+D EP Y K + E + Y + +
Sbjct: 119 PKHLMLASTSSIY----GANEKIPFAEADR-ADEPMTLYAATKKSMELMAHSYAHLYKVP 173
Query: 194 CRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV 253
RF +YGP W GR A+ + +++G+G +R FT+ID+ VE +
Sbjct: 174 TTSFRFFTVYGP---W--GRPDMALFKFVDAIHNGRPIDIYGEGRMSRDFTYIDDLVESI 228
Query: 254 LRLT---------------------KSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPI 292
+RL+ + FR VN G + V + E V +
Sbjct: 229 VRLSHVPPSEENRVAPEKATDTLSRHAPFRV-VNTGGGQPVELMTFVETVEKAVGRPAIH 287
Query: 293 HHIPGPEGVRGRN-SDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKT 343
+ +P +G R + L++ G+ PS+ +++G+ W + + T
Sbjct: 288 NMLPMQQGDVPRTFASPDLLEALTGFKPSVSVEEGVARFVEWYDQNYRRAHT 339
>sp|Q58455|Y1055_METJA Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1055 PE=3 SV=1
Length = 326
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 148/326 (45%), Gaps = 29/326 (8%)
Query: 29 ISVTGAGGFIASHIARRLKSE-------------GHYIIASDWKKNEHMTEDMFCHEFHL 75
I VTG+ GFI H+++ L +Y K+NE + ++ + F
Sbjct: 6 ILVTGSAGFIGFHLSKYLMDNYEDLKVIGIDNLNNYYNPVLKEKRNE-ILKNYENYTFIK 64
Query: 76 VDLRVMDNCLKVTKG--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG 133
+D D+ ++ K +D + +L A G +Q+ + I +N M + N+ E +R
Sbjct: 65 LDFSDWDDLVENLKDKEIDLIVHLGAQAGVRYSLQNPWAYIK-SNEMGTLNIFEFARRFD 123
Query: 134 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
+++ YASS+ +Y ++ + E D +P Y K ++E + Y +GI+
Sbjct: 124 IEKVVYASSSSVYGGNRK----IPFSEDDR-VDKPISLYASTKRSNELMAHVYHHLYGIK 178
Query: 194 CRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV 253
RF +YG +G + A F + L + E++ G R FT+I + V+G+
Sbjct: 179 MIGLRFFTVYGEYGR----PDMAYFKFAKNILLGKE-IEVYNYGNMERDFTYISDVVDGI 233
Query: 254 LRLTKSDF-REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIK 312
LR K DF E N+G+ + V + E++ + +KK +P +G R +
Sbjct: 234 LRAIKKDFDYEIFNLGNSKPVKLMYFIELIEKYLNKKAKKKFLPMQDGDVLRTYADLSKS 293
Query: 313 EK-LGWAPSMKLKDGLRITYFWIKEQ 337
EK LG+ P + +++GL+ W E
Sbjct: 294 EKLLGYKPKVTIEEGLKRFCNWFLEN 319
>sp|A0R5C5|GALE_MYCS2 UDP-glucose 4-epimerase OS=Mycobacterium smegmatis (strain ATCC
700084 / mc(2)155) GN=MSMEG_6142 PE=1 SV=2
Length = 313
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 140/322 (43%), Gaps = 20/322 (6%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASD-----WKKNEHMTEDMFCHEFHLVDLRVM 81
+R VTGA GFI S + RL ++GH ++ D +N H E+ EF D+
Sbjct: 1 MRTLVTGAAGFIGSTLVDRLLADGHGVVGLDDLSSGRAENLHSAENSDKFEFVKADIVDA 60
Query: 82 D-NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYA 140
D L + +F+LAA + + + N + + + EA+R++GV++ +
Sbjct: 61 DLTGLLAEFKPEVIFHLAAQISVKRSVD-DPPFDATVNVVGTVRLAEAARLAGVRKVVHT 119
Query: 141 SS-ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRF 199
SS +Y T + S+ P P Y K+A E Y + ++C
Sbjct: 120 SSGGSVY------GTPPAYPTSEDMPVNPASPYAAGKVAGEVYLNMYRNLYDLDCSHIAP 173
Query: 200 HNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL-TK 258
N+YGP G E A +AL + +++GDG TR + F+D+ V+ +R
Sbjct: 174 ANVYGPRQDPHG--EAGVVAIFSEALLAGRTTKIFGDGSDTRDYVFVDDVVDAFVRAGGP 231
Query: 259 SDFREPVNIGSDEMVSMNEM-AEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGW 317
+ + N+G+ S E+ I + P H P +R DNT +E LGW
Sbjct: 232 AGGGQRFNVGTGVETSTRELHTAIAGAVGAPDEPEFHPPRLGDLRRSRLDNTRAREVLGW 291
Query: 318 APSMKLKDGLRIT--YFWIKEQ 337
P + L +G+ T +F K Q
Sbjct: 292 QPQVALAEGIAKTVEFFRNKSQ 313
>sp|O81312|GAE3_ARATH UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2
SV=1
Length = 430
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 144/336 (42%), Gaps = 42/336 (12%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASD----------WKKNEHMTE--DMFCHEFHLV 76
+ VTGA GF+ +H++ LK G ++ D + + + E +F E +
Sbjct: 93 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDIN 152
Query: 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK- 135
D ++ +V HV +LAA G+ + N S +++N N+LE + + +
Sbjct: 153 DAALLKKLFEVVP-FTHVMHLAAQ-AGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQP 210
Query: 136 RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
+ASS+ +Y L T V E D +P Y K A EE+ Y +G+
Sbjct: 211 AIVWASSSSVY----GLNTKVPFSEKDR-TDQPASLYAATKKAGEEIAHTYNHIYGLSLT 265
Query: 196 VGRFHNIYGPFGTWKGGREKAPAAFCRKAL--TSTDKFEMWGDGLQTRSFTFIDECVEGV 253
RF +YGP+G + A F R L + FE G R FT+ID+ V+G
Sbjct: 266 GLRFFTVYGPWGR----PDMAYFFFTRDILKGKAISIFEGVNHGTVARDFTYIDDIVKGC 321
Query: 254 L-------RLTKSDFREP-------VNIGSDEMVSMNEMAEIV--LSFEDKKLPIHHIPG 297
L + T S ++ N+G+ V + ++ I+ L K I +P
Sbjct: 322 LGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVTILERLLKVKAKRNIMKLPR 381
Query: 298 PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 333
V+ +++ + + +LG+ P+ L+ GL+ W
Sbjct: 382 NGDVQFTHANISSAQRELGYKPTTDLQTGLKKFARW 417
>sp|Q9LPC1|GAE2_ARATH UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2
SV=1
Length = 434
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 142/338 (42%), Gaps = 42/338 (12%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------------DMFCHEFH 74
+ + VTGA GF+ +H++ LK G ++ D + + T +F E
Sbjct: 92 VSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGD 151
Query: 75 LVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV 134
+ DL ++ +V HV +LAA G+ + N +++N N+LE + +
Sbjct: 152 INDLSLLKKLFEVVP-FTHVMHLAAQ-AGVRYAMENPGSYVHSNIAGFVNLLEVCKSANP 209
Query: 135 K-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
+ +ASS+ +Y L T V E D +P Y K A EE+ Y +G+
Sbjct: 210 QPAIVWASSSSVY----GLNTKVPFSEKDR-TDQPASLYAATKKAGEEIAHTYNHIYGLS 264
Query: 194 CRVGRFHNIYGPFGTWKGGREKAPAAFCRKAL--TSTDKFEMWGDGLQTRSFTFIDECVE 251
RF +YGP+G + A F R L + FE G R FT+ID+ V+
Sbjct: 265 LTGLRFFTVYGPWGR----PDMAYFFFTRDILKGKAISIFEGANHGTVARDFTYIDDIVK 320
Query: 252 GVL-------RLTKSDFRE-------PVNIGSDEMVSMNEMAEIV--LSFEDKKLPIHHI 295
G L + T S ++ N+G+ V + ++ I+ L K + +
Sbjct: 321 GCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVSILERLLKVKAKRNMMKL 380
Query: 296 PGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 333
P V +++ + + + G+ PS L+ GL+ W
Sbjct: 381 PRNGDVPFTHANISSAQREFGYKPSTDLQTGLKKFVRW 418
>sp|Q6MWV3|GALE_MYCTU UDP-glucose 4-epimerase OS=Mycobacterium tuberculosis GN=galE1 PE=3
SV=1
Length = 314
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 143/336 (42%), Gaps = 50/336 (14%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASD------WKKNEHMTEDMFCHEFHLVDLRV 80
+R VTGA GFI S + RL ++GH ++ D EH+ D H F D+
Sbjct: 1 MRALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLA-DNSAHVFVEADIVT 59
Query: 81 MD-NCLKVTKGVDHVFNLAADMG---GMGFIQSNHSVIMYNNTMISFNMLEASRISGVKR 136
D + + + VF+LAA + + Q + +V N + + + EA+R +GV++
Sbjct: 60 ADLHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAV----NVIGTVRLAEAARQTGVRK 115
Query: 137 FFYASS-ACIY---PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGI 192
+ SS IY PE+ ET P +P Y K+A E + +G+
Sbjct: 116 IVHTSSGGSIYGTPPEYPTPET---------APTDPASPYAAGKVAGEIYLNTFRHLYGL 166
Query: 193 ECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC--- 249
+C N+YGP G E A +AL S ++GDG TR + F+D+
Sbjct: 167 DCSHIAPANVYGPRQDPHG--EAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVVDA 224
Query: 250 -------VEGVLRLTKSDFREPVNIGSDEMVSMNEM-AEIVLSFEDKKLPIHHIPGPEGV 301
V G LR NIG+ + S ++ + + + P H P +
Sbjct: 225 FVRVSADVGGGLRF---------NIGTGKETSDRQLHSAVAAAVGGPDDPEFHPPRLGDL 275
Query: 302 RGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQ 337
+ D L + LGW P ++L DG+R T + + +
Sbjct: 276 KRSCLDIGLAERVLGWRPQIELADGVRRTVEYFRHK 311
>sp|Q9SYM5|RHM1_ARATH Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana
GN=RHM1 PE=1 SV=1
Length = 669
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 144/326 (44%), Gaps = 25/326 (7%)
Query: 29 ISVTGAGGFIASHIARRL-KSEGHYIIAS----DWKKN-EHMTEDMFCHEFHLV--DLRV 80
I +TGA GFIASH+A RL +S Y I D+ N +++ F V D+
Sbjct: 9 ILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFVKGDIAS 68
Query: 81 MD--NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRF 137
D N L +T+G+D + + AA N NN + +LEA +++G ++RF
Sbjct: 69 ADLVNHLLITEGIDTIMHFAAQTHVDNSF-GNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
Query: 138 FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
+ S+ +Y E + + + +A P + Y K +E L Y + +G+
Sbjct: 128 IHVSTDEVYGE---TDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
Query: 198 RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV-LRL 256
R +N+YGP EK F A+ + GDG RS+ + ++ E + L
Sbjct: 185 RGNNVYGP----NQFPEKLIPKFILLAMRG-QVLPIHGDGSNVRSYLYCEDVAEAFEVVL 239
Query: 257 TKSDFREPVNIGSDEMVSMNEMAEIVLSF--EDKKLPIHHIPG-PEGVRGRNSDNTLIKE 313
K + NIG+ + +N++A+ + D + I + P + D+ +K
Sbjct: 240 HKGEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLK- 298
Query: 314 KLGWAPSMKLKDGLRITYFWIKEQIE 339
KLGW+ ++GL+ T W + E
Sbjct: 299 KLGWSERTTWEEGLKKTMDWYTQNPE 324
>sp|Q9LH76|RHM3_ARATH Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana
GN=RHM3 PE=1 SV=1
Length = 664
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 141/326 (43%), Gaps = 25/326 (7%)
Query: 29 ISVTGAGGFIASHIARRL-KSEGHYIIAS----DWKKN-EHMTEDMFCHEFHLV--DLRV 80
I +TGA GFIASH+A RL +S Y I D+ N +++ F V D+
Sbjct: 9 ILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIAS 68
Query: 81 MD--NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRF 137
D N L +T+ +D + + AA N NN + +LEA +++G ++RF
Sbjct: 69 ADLVNYLLITEEIDTIMHFAAQTHVDNSF-GNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
Query: 138 FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
+ S+ +Y E + + S+ +A P + Y K +E L Y + +G+
Sbjct: 128 IHVSTDEVYGE---TDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
Query: 198 RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV-LRL 256
R +N+YGP EK F A+ + GDG RS+ + ++ E + L
Sbjct: 185 RGNNVYGP----NQFPEKLIPKFILLAMNGK-PLPIHGDGSNVRSYLYCEDVAEAFEVVL 239
Query: 257 TKSDFREPVNIGSDEMVSMNEMAEIV--LSFEDKKLPIHHIPG-PEGVRGRNSDNTLIKE 313
K + NIG+ + ++A + L D I ++ P + D+ +K
Sbjct: 240 HKGEVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLK- 298
Query: 314 KLGWAPSMKLKDGLRITYFWIKEQIE 339
KLGW ++GLR T W E E
Sbjct: 299 KLGWCERTNWEEGLRKTMEWYTENPE 324
>sp|Q9STI6|GAE5_ARATH UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana GN=GAE5 PE=2
SV=1
Length = 436
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 152/361 (42%), Gaps = 48/361 (13%)
Query: 8 YGAYTYEELEREPYWPSEK--LRISVTGAGGFIASHIARRLKSEGHYIIASD-------- 57
YG +E+ R+ P L + VTGA GF+ +H++ L+ G ++ D
Sbjct: 75 YGGSHWEKQVRKSARPRSHGGLTVLVTGASGFVGTHVSIALRRRGDGVLGLDNFNRYYDP 134
Query: 58 --WKKNEHMTE--DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSV 113
+ + + E +F E + D ++ V HV +LAA G +Q+ S
Sbjct: 135 KLKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVL-FTHVMHLAAQAGVRYAMQNPGSY 193
Query: 114 IMYNNTMISF-NMLEASRISGVK-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA 171
+ N+ + F N+LE S+ + + +ASS+ +Y L + V E D +P
Sbjct: 194 V--NSNIAGFVNLLEVSKSANPQPAIVWASSSSVY----GLNSKVPFSEKDR-TDQPASL 246
Query: 172 YGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAL---TST 228
Y K A E + Y +G+ RF +YGP+ GR F K + +
Sbjct: 247 YAATKKAGEGIAHTYNHIYGLSLTGLRFFTVYGPW-----GRPDMAYFFFTKDILKGKTI 301
Query: 229 DKFEMWGDGLQTRSFTFIDECVEGVL-------RLTKSDFREP-------VNIGSDEMVS 274
FE G R FT+ID+ V+G L + T S ++ N+G+ V
Sbjct: 302 TVFESPDKGSVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPVP 361
Query: 275 MNEMAEIVLSFEDKKLPIHHIPGPEG--VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYF 332
+ ++ I+ K +P P V +++ TL + +LG+ P++ L+ GL+
Sbjct: 362 VTKLVTILEKLLKMKAKKKIMPLPRNGDVEFTHANITLAQAELGYKPAVDLETGLKKFVK 421
Query: 333 W 333
W
Sbjct: 422 W 422
>sp|Q9LIS3|GAE6_ARATH UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1
SV=1
Length = 460
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 145/360 (40%), Gaps = 52/360 (14%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASD----------WKKNEHMTE--DMFCHEFH 74
L + VTGA GF+ SH + L+ G ++ D + + + E +F E
Sbjct: 112 LSVLVTGAAGFVGSHCSLALRKRGDGVLGFDNFNDYYDPSLKRARQELLEKQQVFIVEGD 171
Query: 75 LVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV 134
L D ++ V H+ +LAA G+ + N + +N N+LE ++ +
Sbjct: 172 LNDGPLLRKLFDVVP-FTHILHLAAQ-AGVRYAMKNPQSYIASNIAGFVNLLEVAKAANP 229
Query: 135 K-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
+ +ASS+ +Y L T E + +P Y K A EE+ Y +G+
Sbjct: 230 QPAIVWASSSSVY----GLNTENPFSE-EHRTDQPASLYAATKKAGEEIAHTYNHIYGLS 284
Query: 194 CRVGRFHNIYGPFGTWKGGREKAPAAFCRKAL---TSTDKFEMWGDGLQTRSFTFIDECV 250
RF +YGP W GR F K + S D + + R FT+ID+ V
Sbjct: 285 LTGLRFFTVYGP---W--GRPDMAYFFFTKDILHGKSIDIYRTQDNQEVARDFTYIDDIV 339
Query: 251 EGVL---------------RLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHI 295
+G + + ++ R N+G+ V + + I+ K H I
Sbjct: 340 KGCVGALDTAEKSTGSGGKKRGQAQLRV-YNLGNTSPVPVGRLVSILEGLLGTKAKKHLI 398
Query: 296 PGPEG--VRGRNSDNTLIKEKLGWAPSMKLKDGLR------ITYFWIKEQIEKEKTQGID 347
P V +++ +L + G+ P+ L GLR + Y+ I+ +++KE + D
Sbjct: 399 KMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVGYYGIQPRVKKETSHAED 458
>sp|Q9LPG6|RHM2_ARATH Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana
GN=RHM2 PE=1 SV=1
Length = 667
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 141/329 (42%), Gaps = 31/329 (9%)
Query: 29 ISVTGAGGFIASHIARRL-KSEGHYIIA--------SDWKKNEHMTEDMFCHEFHLV--D 77
I +TGA GFIASH+A RL ++ Y I SD K ++ F V D
Sbjct: 11 ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLK---NLDPSFSSPNFKFVKGD 67
Query: 78 LRVMD--NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-V 134
+ D N L +T+ +D + + AA N NN + +LEA +++G +
Sbjct: 68 IASDDLVNYLLITENIDTIMHFAAQTHVDNSF-GNSFEFTKNNIYGTHVLLEACKVTGQI 126
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
+RF + S+ +Y E + + ++ +A P + Y K +E L Y + +G+
Sbjct: 127 RRFIHVSTDEVYGE---TDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 183
Query: 195 RVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV- 253
R +N+YGP EK F A+ S + GDG RS+ + ++ E
Sbjct: 184 ITTRGNNVYGP----NQFPEKMIPKFILLAM-SGKPLPIHGDGSNVRSYLYCEDVAEAFE 238
Query: 254 LRLTKSDFREPVNIGSDEMVSMNEMAEIVLSF--EDKKLPIHHIPG-PEGVRGRNSDNTL 310
+ L K + N+G+ + ++A + +D + I + P + D+
Sbjct: 239 VVLHKGEIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQK 298
Query: 311 IKEKLGWAPSMKLKDGLRITYFWIKEQIE 339
+K KLGW +DGL+ T W + E
Sbjct: 299 LK-KLGWQERTNWEDGLKKTMDWYTQNPE 326
>sp|P29782|RMLB_STRGR dTDP-glucose 4,6-dehydratase OS=Streptomyces griseus GN=strE PE=1
SV=1
Length = 328
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 129/319 (40%), Gaps = 32/319 (10%)
Query: 31 VTGAGGFIASHIARRLKSEGH----YIIASDWKKNEHMTEDMFCHEFH-LVDLRVMDNC- 84
VTGA GFI S R L G + A D +++ H D C
Sbjct: 7 VTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGDICD 66
Query: 85 ---LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+V G D V +LAA+ + + SV + N + +L+A+ GV F S
Sbjct: 67 APGRRVMAGQDQVVHLAAE-SHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVASFVQVS 125
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
+ +Y E +W P P Y K + + L + G++ RV
Sbjct: 126 TDEVYGSL----------EHGSWTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVT 175
Query: 198 RFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL- 256
R N YGP + EK F L + ++GDGL R + +D+ V G+ +
Sbjct: 176 RCSNNYGP----RQFPEKLIPRFI-TLLMDGHRVPLYGDGLNVREWLHVDDHVRGIEAVR 230
Query: 257 TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKL-PIHHIPGPEGVRGRNS-DNTLIKEK 314
T+ NIG +S E+ ++L + ++ +G R + D+T I+ +
Sbjct: 231 TRGRAGRVYNIGGGATLSNKELVGLLLEAAGADWGSVEYVEDRKGHDRRYAVDSTRIQRE 290
Query: 315 LGWAPSMKLKDGLRITYFW 333
LG+AP++ L DGL T W
Sbjct: 291 LGFAPAVDLADGLAATVAW 309
>sp|O95455|TGDS_HUMAN dTDP-D-glucose 4,6-dehydratase OS=Homo sapiens GN=TGDS PE=2 SV=1
Length = 350
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 146/342 (42%), Gaps = 46/342 (13%)
Query: 28 RISVTGAGGFIASH-IARRLKSEGHYIIAS----DW------------KKNEHMTEDMFC 70
R+ VTG GFIASH I ++ +Y+I + D+ K+N + C
Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78
Query: 71 HEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEAS 129
+ H V L L T+ +D V + AA + F+++ Y N + ++ A+
Sbjct: 79 -DSHFVKL------LFETEKIDIVLHFAAQTHVDLSFVRAFE--FTYVNVYGTHVLVSAA 129
Query: 130 RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD 189
+ V++F Y S+ +Y ++ + ++ P +P + Y K A+E + Y +
Sbjct: 130 HEARVEKFIYVSTDEVY------GGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWEQ 183
Query: 190 FGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC 249
+ + R N+YGP EK F L K + G GLQTR+F + +
Sbjct: 184 YKFPVVITRSSNVYGPHQY----PEKVIPKFI-SLLQHNRKCCIHGSGLQTRNFLYATDV 238
Query: 250 VEGVLR-LTKSDFREPVNIGSDEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEGVRGRNSD 307
VE L L K E NIG++ +S+ ++A E++ ++ + V R ++
Sbjct: 239 VEAFLTVLKKGKPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTN 298
Query: 308 NTLIKEK------LGWAPSMKLKDGLRITYFWIKEQIEKEKT 343
+ K LGW P + K+G++ T W +E K
Sbjct: 299 DMRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYRENFHNWKN 340
>sp|Q04973|VIPB_SALTI Vi polysaccharide biosynthesis protein VipB/TviC OS=Salmonella
typhi GN=vipB PE=3 SV=1
Length = 348
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 143/348 (41%), Gaps = 42/348 (12%)
Query: 13 YEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKN--EHMTEDMFC 70
YEEL + + R +TG GFI S + L +I D +H +D+
Sbjct: 4 YEELRTKLVLAPK--RWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRT 61
Query: 71 H-------EFHLV--DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI 121
F + D+R +C K K VD+V + AA +G + +S I N+ I
Sbjct: 62 SVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAA-LGSVP--RSLKDPIATNSANI 118
Query: 122 S--FNMLEASRISGVKRFFYASSACIY---PEFKQLETNVSLKESDAWPAEPQDAYGLEK 176
NML A+R + V F YA+S+ Y P+ ++E + P Y + K
Sbjct: 119 DGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERI---------GRPLSPYAVTK 169
Query: 177 LASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGD 236
+E + + + R+ N++G G + +L + + GD
Sbjct: 170 YVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWIL-SLLKDEPIYINGD 228
Query: 237 GLQTRSFTFIDECVEG-VLRLTKSDF---REPVNIGSDEMVSMNEMAEIV---LSF---- 285
G +R F +I+ ++ +L T +D + N+ + S+NE+ ++ L+
Sbjct: 229 GSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNE 288
Query: 286 EDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 333
+ + PI+ V+ +D T IK L + P +K+GL+ T W
Sbjct: 289 QSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKW 336
>sp|Q9M0B6|GAE1_ARATH UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1
SV=1
Length = 429
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 143/343 (41%), Gaps = 46/343 (13%)
Query: 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH------------MTEDMFCH 71
S + + VTGA GF+ SH++ L+ G ++ D N + + +F
Sbjct: 85 SGGISVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRGIFVV 144
Query: 72 EFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRI 131
E L D +++ V HV +LAA G+ + N +++N N+LE +
Sbjct: 145 EGDLNDAKLLAKLFDVV-AFTHVMHLAAQ-AGVRYALENPQSYVHSNIAGLVNLLEICKA 202
Query: 132 SGVK-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF 190
+ + +ASS+ +Y L V ESD +P Y K A EE+ Y +
Sbjct: 203 ANPQPAIVWASSSSVY----GLNEKVPFSESDR-TDQPASLYAATKKAGEEITHTYNHIY 257
Query: 191 GIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGL--QTRSFTFIDE 248
G+ RF +YGP+G + A +F R L G R FT+ID+
Sbjct: 258 GLAITGLRFFTVYGPWGR----PDMAYFSFTRNILQGKPITIYRGKNRVDLARDFTYIDD 313
Query: 249 CVEGVL---------------RLTKSDFREPVNIGSDEMVSMNEMAEIV---LSFEDKKL 290
V+G L + + +R N+G+ V++ + +I+ L + K+
Sbjct: 314 IVKGCLGSLDSSGKSTGSGGKKRGAAPYRI-FNLGNTSPVTVPILVDILEKHLKVKAKRN 372
Query: 291 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 333
+ +PG V +++ + + + G+ P+ L+ GL+ W
Sbjct: 373 FV-EMPGNGDVPFTHANISSARNEFGYKPTTDLETGLKKFVRW 414
>sp|A6QLW2|TGDS_BOVIN dTDP-D-glucose 4,6-dehydratase OS=Bos taurus GN=TGDS PE=2 SV=1
Length = 355
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 146/342 (42%), Gaps = 46/342 (13%)
Query: 28 RISVTGAGGFIASH-IARRLKSEGHYIIAS----DW------------KKNEHMTEDMFC 70
R+ VTG GFIASH I ++ +Y+I + D+ K+N + C
Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78
Query: 71 HEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEAS 129
+ H V L L T+ +D V + AA + F+++ Y N + ++ A+
Sbjct: 79 -DSHFVKL------LFETEKIDIVLHFAAQTHVDLSFVRAFE--FTYVNVYGTHVLVSAA 129
Query: 130 RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD 189
+ V++F Y S+ +Y ++ + ++ P +P + Y K A+E + Y +
Sbjct: 130 HEARVEKFIYVSTDEVY------GGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWEQ 183
Query: 190 FGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC 249
+ + R N+YGP EK F L K + G GLQTR+F + +
Sbjct: 184 YKFPVVITRSSNVYGPHQY----PEKVIPKFI-SLLQHNRKCCIHGTGLQTRNFLYATDV 238
Query: 250 VEGVLR-LTKSDFREPVNIGSDEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEGVRGRNSD 307
VE L L K E NIG++ +S+ ++A E++ ++ + V R ++
Sbjct: 239 VEAFLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTN 298
Query: 308 NTLIKEK------LGWAPSMKLKDGLRITYFWIKEQIEKEKT 343
+ K LGW P + K+G++ T W +E K
Sbjct: 299 DMRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYRENFHNWKN 340
>sp|Q59083|EXOB_AZOBR UDP-glucose 4-epimerase OS=Azospirillum brasilense GN=exoB PE=3
SV=1
Length = 348
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 141/347 (40%), Gaps = 49/347 (14%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASD---WKKNEHMTEDMFCHEFHLVDLRVMDNC 84
R+ VTG G+I SH+ L G + D + E + + E + ++D
Sbjct: 10 RVLVTGGAGYIGSHVLHALTDAGIPAVTIDDLSAGRREAIPAAVPLVEGDIGSAELLDRV 69
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVI-----MYNNTMISFNMLEASRISGVKRFFY 139
++ + VD V + A G I SV+ NNT S +L A +G+ + +
Sbjct: 70 MRDHR-VDAVMHFA------GSIVVPESVVKPLDYYRNNTANSLTLLGACLRAGIDKVVF 122
Query: 140 ASSACIY--PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
+S+A +Y PE +V ++E DA P P + YG KL +E++ + G+ +
Sbjct: 123 SSTAAVYGAPE------SVPIRE-DA-PTVPINPYGASKLMTEQMLRDAGAAHGLRSVIL 174
Query: 198 RFHNIYGPFGTWKGGREKAPAAF-----CRKALTSTDKFEMWG------DGLQTRSFTFI 246
R+ N+ G + G+ A C+ L ++G DG R + +
Sbjct: 175 RYFNVAGADPAGRTGQATPVATHLIKVACQALLGRRPPLAIFGTDYDTPDGTCIRDYIHV 234
Query: 247 ----DECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLP---IHHIPG-- 297
D V +L L + +N G S+ E+ + +++P PG
Sbjct: 235 SDLADAHVLALLHLRRGGGSLLMNCGYGRGASVREVVRTLEEVSGEQVPATFADRRPGDP 294
Query: 298 PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQ 344
P+ V G + I+E+LGW P DG+ + + +E+ Q
Sbjct: 295 PQLVAGADR----IREQLGWVPKHDRLDGIVRSALSWERSLEQSVGQ 337
>sp|P95780|RMLB_STRMU dTDP-glucose 4,6-dehydratase OS=Streptococcus mutans serotype c
(strain ATCC 700610 / UA159) GN=rmlB PE=1 SV=2
Length = 348
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 142/334 (42%), Gaps = 30/334 (8%)
Query: 24 SEKLRISVTGAGGFIAS---HIARRLKSEGHYIIASD--WKKNEHMTEDMFCHEFHLVDL 78
+E I VTG GFI S H + H + + N E++ LV
Sbjct: 2 TEYKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANLEEILGDRVELVVG 61
Query: 79 RVMDNCL--KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKR 136
+ D+ L K+ D + + AA+ ++ + S +Y N + ++ +LEA+R + R
Sbjct: 62 DIADSELVDKLAAKADAIVHYAAESHNDNSLK-DPSPFIYTNFVGTYILLEAARKYDI-R 119
Query: 137 FFYASSACIYPEFKQLETNVSLKES--DAWPAE----PQDAYGLEKLASEELCKHYTKDF 190
F + S+ +Y + E E + + AE P Y K AS+ + K + + F
Sbjct: 120 FHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSF 179
Query: 191 GIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALT---STDKFEMWGDGLQTRSFTFID 247
G++ + N YGP+ + F + +T S K +++G+G R + +
Sbjct: 180 GVKATISNCSNNYGPY--------QHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTN 231
Query: 248 ECVEGVLR-LTKSDFREPVNIGSDEMVSMNEMAEIVL-SFEDKKLPIHHIPGPEGVRGRN 305
+ GV LTK E IG+D + E+ E++L K H+ G R
Sbjct: 232 DHSTGVWAILTKGRIGETYLIGADGEKNNKEVLELILEKMSQPKNAYDHVTDRAGHDLRY 291
Query: 306 S-DNTLIKEKLGWAPSM-KLKDGLRITYFWIKEQ 337
+ D+T ++E+LGW P ++GL T W E
Sbjct: 292 AIDSTKLREELGWKPQFTNFEEGLEDTIKWYTEH 325
>sp|Q3J7X9|HLDD_NITOC ADP-L-glycero-D-manno-heptose-6-epimerase OS=Nitrosococcus oceani
(strain ATCC 19707 / NCIMB 11848) GN=hldD PE=3 SV=1
Length = 317
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 128/320 (40%), Gaps = 23/320 (7%)
Query: 29 ISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
I VTG GFI S+I + L G ++ D + E + + C + D + +K
Sbjct: 2 IIVTGGAGFIGSNIIKALNQGGREDILVVDDLTQGEKFSNLIDCEIWDYWDKQPFLQAIK 61
Query: 87 VTKGVDHVFNLAADMGGM-GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145
+ H + G + N +M NN S +L + F YASSA +
Sbjct: 62 AGEEFPHPVDAFIHQGACSATTEWNGRYMMENNFYYSKRLLHYCLERRIP-FLYASSAAV 120
Query: 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
Y ++ +E + A P++ YG K ++ + Y + R+ NIYGP
Sbjct: 121 YG------CGLTFQEHREFEA-PRNVYGYSKWLFDQYVRRYLPTASSQIVGLRYFNIYGP 173
Query: 206 FGTWKGGREK-APAAFCRKALTSTDKFEMWGDGL----QTRSFTFI-DECVEGVLRLTKS 259
KG A A C+ T K DG Q R F + D + L
Sbjct: 174 REAHKGAMASVAYHAHCQLKETGRIKLFEGCDGYEHGEQRRDFVSVADAAAVNLWFLEHP 233
Query: 260 DFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGR-----NSDNTLIKEK 314
+ N+G+ + + NE+A+ VL+F I +IP P+ +RGR +D ++E
Sbjct: 234 NQSGIFNVGTGQAQTFNEVAQAVLAFHGHG-EIEYIPFPDHLRGRYQSFTQADIHALREA 292
Query: 315 LGWAPSMKLKDGLRITYFWI 334
P ++ G++ W+
Sbjct: 293 GYAEPFALVEKGVKTYLDWL 312
>sp|Q0A4T8|HLDD_ALHEH ADP-L-glycero-D-manno-heptose-6-epimerase OS=Alkalilimnicola
ehrlichei (strain MLHE-1) GN=hldD PE=3 SV=1
Length = 320
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 116/292 (39%), Gaps = 33/292 (11%)
Query: 29 ISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
I VTG GFI S++ L G I+ + + E C D ++
Sbjct: 2 IIVTGGAGFIGSNLVHELNRRGRTDVIVVDNLTRGEKALNLADCVIADYYDKDDFITLIE 61
Query: 87 VTKG---VDHVFNLAADMGGMGFIQSNHSVIMYNNTMIS---FNMLEASRISGVKRFFYA 140
+G V+ VF+L A + + +M NN S F+ + RI F YA
Sbjct: 62 ADEGLGPVEAVFHLGA---CSATTEWDGRYMMRNNFEYSRALFHWCQDRRIP----FIYA 114
Query: 141 SSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFH 200
SSA +Y S+ P + YG KLA ++ + Y D + R+
Sbjct: 115 SSAAVY-------GGNSVFTEHPEHERPLNVYGYSKLAFDQYLRRYLDDLSAQVVGLRYF 167
Query: 201 NIYGPFGTWKGGREKAPAAFCRKALTST-----DKFEMWGDGLQTRSFTFIDECVEGVLR 255
N+YGP KGG F R+ S + + + DG Q R F + +CV L+
Sbjct: 168 NVYGPREQHKGGMASVVHHFSRQLRESGQVRLFEGSDGYADGEQRRDFVDVSDCVR--LK 225
Query: 256 LTKSDFREP---VNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGR 304
L D E N G+ + N MA V+ + I +IP PE ++GR
Sbjct: 226 LWLLDHPEVSGIYNCGTGRARTFNAMAHAVIDWFGHG-EIEYIPFPEHLKGR 276
>sp|Q8VDR7|TGDS_MOUSE dTDP-D-glucose 4,6-dehydratase OS=Mus musculus GN=Tgds PE=2 SV=2
Length = 355
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 145/342 (42%), Gaps = 46/342 (13%)
Query: 28 RISVTGAGGFIASHIARRLKSE-GHYIIAS----DW------------KKNEHMTEDMFC 70
R+ VTG GFIASH+ L + Y+I + D+ K+N + C
Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 78
Query: 71 HEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEAS 129
+ H V L L + +D V + AA + F+++ Y N + ++ A+
Sbjct: 79 -DSHFVKL------LFEVEKIDIVLHFAAQTHVDLSFVRAFE--FTYVNVYGTHVLVNAA 129
Query: 130 RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD 189
+GV++F Y S+ +Y ++ + ++ P +P + Y K A+E + Y +
Sbjct: 130 YEAGVEKFIYVSTDEVY------GGSLDQEFDESSPKQPTNPYASSKAAAECFVQSYWER 183
Query: 190 FGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC 249
+ + R N+YGP EK F L K + G GLQ R+F + +
Sbjct: 184 YKFPVVITRSSNVYGPHQY----PEKVIPKFI-SLLQHNRKCCIHGSGLQRRNFLYAADV 238
Query: 250 VEGVLR-LTKSDFREPVNIGSDEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEGVRGRNSD 307
VE L LTK + E NIG++ +S+ ++A E++ ++ + V R +
Sbjct: 239 VEAFLTVLTKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHN 298
Query: 308 NTLIKEK------LGWAPSMKLKDGLRITYFWIKEQIEKEKT 343
+ K LGW P + ++G++ T W ++ K
Sbjct: 299 DMRYPMKSEKIHSLGWKPKVPWEEGIKKTVEWYRKNFHNWKN 340
>sp|Q46Y59|HLDD_CUPPJ ADP-L-glycero-D-manno-heptose-6-epimerase OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=hldD PE=3
SV=1
Length = 331
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 158/352 (44%), Gaps = 64/352 (18%)
Query: 27 LRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDMFCHEFH-LVDLRVMDNC 84
+ I VTGA GFI S++ + L + G ++I+A D N H + +FH LVD + D
Sbjct: 1 MTIIVTGAAGFIGSNLVKGLNARGENHIVAVD---NLHRAD-----KFHNLVDCEIRDYL 52
Query: 85 LK------VTKG----VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV 134
K +G V VF+L A M + + +M NN S ++E ++
Sbjct: 53 DKDDFLSRFERGEFGRVRAVFHLGACTDTM---EQDGRYLMENNYRYSKTLMELC-LAQD 108
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
+F YASSA +Y E + S +E+ + P YG K ++ ++ D +
Sbjct: 109 TQFIYASSAAVYGE------SHSFREAREYE-RPLSVYGYSKFLFDQAVRNRL-DGALSQ 160
Query: 195 RVG-RFHNIYGPFGTWKGGREKAPAAFCRK--ALTSTDKFEMWGD------GLQTRSFTF 245
VG R+ N+YGP + + + + C++ + +++G+ G Q+ F
Sbjct: 161 VVGLRYFNVYGP---GEAHKARMASIVCQQFEQFRAEGTVKLFGEHGGHGPGCQSHDFVS 217
Query: 246 IDECVEGVLRLTKSDFREPV-NIGSDEMVSMNEMAEIV---LSFEDKKLP---------- 291
ID+ V+ L R + N+GS S N++A +V L + K P
Sbjct: 218 IDDVVKVNLFFLDHPRRSGIFNVGSGHARSFNDVACVVVNTLRAAEDKPPLALEELVQEG 277
Query: 292 -IHHIPGPEGVRGR-----NSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQ 337
+ ++ P+ +RGR SD++ ++E AP + +++G+ W+ E+
Sbjct: 278 LLEYLRFPDALRGRYQSFTQSDSSRLREAGYTAPFVAMEEGVARYCQWLLER 329
>sp|Q9KDV3|GALE_BACHD UDP-glucose 4-epimerase OS=Bacillus halodurans (strain ATCC BAA-125
/ DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=galE PE=3
SV=1
Length = 334
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 145/349 (41%), Gaps = 45/349 (12%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH--MTEDMFCHEFHLVDLRVMDNC 84
+ I VTG G+I SH L +G +I D + H D+ + + D +++D
Sbjct: 1 MAILVTGGAGYIGSHTVLFLLEQGEQVIVLDNLQKGHAGALSDVTFYHGDIRDDQLLDTI 60
Query: 85 LKVTKGVDHVFNLAAD-MGGMGFIQSNHSVIMY--NNTMISFNMLEASRISGVKRFFYAS 141
T +D V + AA+ + G Q I Y NN + + +L+ VK+ ++S
Sbjct: 61 F-TTHSIDTVIHFAANSLVGESVKQP----IEYYENNVIGTHTLLKKMLEHDVKKIVFSS 115
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
+A Y E Q + ++ESD P P + YG KLA E++ + +G++ R+ N
Sbjct: 116 TAATYGEPVQ----IPIQESD--PTIPTNPYGETKLAIEKMFHWCQEAYGLQYVCLRYFN 169
Query: 202 IYGPFGTWKGGREKAPAA-----FCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 256
G + G + +P + + AL ++ ++GD QT + I + + V+ L
Sbjct: 170 AAGADPNGRIGEDHSPESHLIPIVLQVALGQRERVAIFGDDYQTEDGSCIRDYIH-VMDL 228
Query: 257 TKSDFRE-----------PVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRN 305
+ + N+G+ + S+ E+ E+ +++ H IP R
Sbjct: 229 ANAHYLACEHLRKDGQSGSFNLGNGKGFSVKEVIEVC-----RQVTGHPIPAEIAPRRSG 283
Query: 306 SDNTLIKEK------LGWAPSM-KLKDGLRITYFWIKEQIEKEKTQGID 347
+LI LGW P L+ + + W KE T+ D
Sbjct: 284 DPASLIASSEKAQTILGWEPKYPSLETMVEHAWNWHKEHPHGYSTENKD 332
>sp|O84903|GALE_LACCA UDP-glucose 4-epimerase OS=Lactobacillus casei GN=galE PE=3 SV=1
Length = 331
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 129/320 (40%), Gaps = 41/320 (12%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
+ I+V G G+I SH ++L + G ++ D H F+ D+R +
Sbjct: 1 MTIAVLGGAGYIGSHTVKQLLAAGEDVVVLDNLITGHRKAVDPRARFYQGDIRDYHFLSQ 60
Query: 87 V--TKGVDHVFNLAADMGGMGFI-QSNHSVIMY--NNTMISFNMLEASRISGVKRFFYAS 141
V + +D + + AA + +S + Y NNT +LEA G+K+ ++S
Sbjct: 61 VFSQEKIDGIVHFAA----FSIVPESMKDPLKYFDNNTGGMITLLEAMNQFGIKKIVFSS 116
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
+A Y E KQ V +KE+D P P + YG KLA E++ +G++ R+ N
Sbjct: 117 TAATYGEPKQ----VPIKETD--PQVPTNPYGESKLAMEKIMHWADVAYGLKFVALRYFN 170
Query: 202 IYGPFGTWKGGREKAPAA-----FCRKALTSTDKFEMWGDGLQTRSFTFI---------- 246
+ G G + P + A + +++GD T+ T +
Sbjct: 171 VAGAMPDGSIGEDHHPETHIVPIILQVAAGTRTGLQIYGDDYPTKDGTNVRDYVHVVDLA 230
Query: 247 DECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNS 306
D + + L + NIGS S E+ +K+ IP G R
Sbjct: 231 DAHILALKYLDAGNKSSAFNIGSAHGFSNLEILNAA-----RKVTGQEIPATMGPRRAGD 285
Query: 307 DNTLI------KEKLGWAPS 320
+TLI ++ LGW P+
Sbjct: 286 PSTLIASSEKARDILGWKPN 305
>sp|B4EB34|HLDD_BURCJ ADP-L-glycero-D-manno-heptose-6-epimerase OS=Burkholderia cepacia
(strain J2315 / LMG 16656) GN=hldD PE=3 SV=1
Length = 330
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 150/355 (42%), Gaps = 68/355 (19%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHY-IIASDWKKNEHMTE-DMFCHEFHLVDLRVMDNC 84
+ + VTGA GFI ++I + L G IIA D ++T D F + LVD + D+
Sbjct: 1 MTLIVTGAAGFIGANIVKALNERGETRIIAVD-----NLTRADKFRN---LVDCEI-DDY 51
Query: 85 LKVTKGVDH-----------VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG 133
L T+ V+ VF+ A M +++ +M NN S +L+ + G
Sbjct: 52 LDKTEFVERFARGDFGKVRAVFHEGACSDTM---ETDGRYMMDNNFRYSRAVLDTCLMQG 108
Query: 134 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
+ F YASSA IY + ++E D P + YG K +++ + +
Sbjct: 109 TQ-FLYASSAAIYGGSTRF-----VEERDV--EAPLNVYGYSKFLFDQVIRRVLPSAKSQ 160
Query: 194 CRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGD------GLQTRSFTFID 247
R+ N+YGP T K GR + A + K +++G+ G QTR F
Sbjct: 161 IAGFRYFNVYGPRETHK-GRMASVAFHNFNQFRAEGKVKLFGEYNGYAPGEQTRDFV--- 216
Query: 248 ECVEGVLRLTKSDFREP-----VNIGSDEMVSMNEMAEIV---LSFEDKKLP-------- 291
VE V ++ F P N+G+ N++A V L D + P
Sbjct: 217 -SVEDVTKVNLFFFDHPEKSGIFNLGTGRAQPFNDIASTVVNTLRALDNQPPLTLAQQVE 275
Query: 292 ---IHHIPGPEGVRGR-----NSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQI 338
I ++P P+ +RG+ +D T ++ AP + +++G+ W+ Q+
Sbjct: 276 QGLIEYVPFPDALRGKYQCFTQADQTKLRAAGYDAPFLTVQEGVDRYVRWLSGQV 330
>sp|Q45291|GALE_CORGL UDP-glucose 4-epimerase OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=galE PE=3 SV=2
Length = 329
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 128/316 (40%), Gaps = 40/316 (12%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASD---WKKNEHMTEDMFCHEFHLVDLRVMDN 83
+++ VTG G++ S A L GH + D E + D E + D V++
Sbjct: 1 MKLLVTGGAGYVGSVAAAVLLEHGHDVTIIDNFSTGNREAVPADARLIEGDVND--VVEE 58
Query: 84 CLKVTKGVDHVFNLAA-DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
L G + V + AA + G + N ++N + + +L+A R GV ++S+
Sbjct: 59 VLS-EGGFEGVVHFAARSLVGESVEKPNE--YWHDNVVTALTLLDAMRAHGVNNLVFSST 115
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNI 202
A Y E + ++ P +P +AYG KL+ + Y FG+ R+ N+
Sbjct: 116 AATYGEPDVVPI------TEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFNV 169
Query: 203 YGPFGTWKGGREKAP---AAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKS 259
G +G RE + A +K M+GD T T + + + +L L K+
Sbjct: 170 AGAYGNIGENREVETHLIPLVLQVATGHREKTFMFGDDWPTPDGTAVRDYIH-ILDLAKA 228
Query: 260 DF----------REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNT 309
N+GS + S+ ++ E+ +++ H IP R T
Sbjct: 229 HVLALESNEAGKHRIFNLGSGDGYSVKQVVEMC-----REVTGHPIPAEVAPRRAGDPAT 283
Query: 310 LI------KEKLGWAP 319
LI K++LGW P
Sbjct: 284 LIASSEKAKQELGWTP 299
>sp|Q54WS6|TGDS_DICDI dTDP-D-glucose 4,6-dehydratase OS=Dictyostelium discoideum GN=tgds
PE=3 SV=1
Length = 434
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 26/275 (9%)
Query: 28 RISVTGAGGFIASHIARRL--KSEGHYIIASDWKKNEHMTEDMFC---------HEFHLV 76
+I +TG GFI SH+A L K + II D ++ C ++ +++
Sbjct: 11 KILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNIL 70
Query: 77 DLRVMDNCLKVTKGVDHVFNLAA-DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135
D +++N + K +D V +LAA F QS NN + + +LE + +K
Sbjct: 71 DSELLENIFEKEK-IDIVIHLAAYTHVDNSFKQS--IKFTENNILGTHYLLETCKNYKLK 127
Query: 136 RFFYASSACIY-----PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF 190
+F Y S+ +Y + +++ ++ P + Y K +E L + Y K F
Sbjct: 128 KFIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSF 187
Query: 191 GIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 250
+ + R +NIYGP K EK F L + K + G G TR++ +ID+ V
Sbjct: 188 KLPVIITRANNIYGP----KQYPEKIIPKFIN-LLLNNKKCTIHGTGKNTRNYLYIDDIV 242
Query: 251 EGV-LRLTKSDFREPVNIGSDEMVSMNEMAEIVLS 284
+ L K + NIG+D +S ++A+ +++
Sbjct: 243 SAFDIILRKGEIGNVYNIGTDFEISNLDVAKKIIN 277
>sp|Q21Y60|HLDD_RHOFD ADP-L-glycero-D-manno-heptose-6-epimerase OS=Rhodoferax
ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)
GN=hldD PE=3 SV=1
Length = 340
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 147/358 (41%), Gaps = 70/358 (19%)
Query: 28 RISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDMFCHEFHL-----VDLRVM 81
RI VTGA GFI S+I + L + G + IIA D + D F + HL VD V
Sbjct: 3 RIVVTGAAGFIGSNIIQGLNARGLNDIIAID----DLTQGDKFRNLAHLKISDYVDASVF 58
Query: 82 DNCLK--VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFY 139
+ ++ VF+ A M +SN +M NN S N+ +A + G R Y
Sbjct: 59 YDLFANGAYGQIEAVFHEGACSDTM---ESNGKYMMDNNYATSVNLFQACQKRGA-RLLY 114
Query: 140 ASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA-SEELCKHYTKDF--GIECRV 196
ASSA Y + + +E A+ P + YG KL + + + DF + +
Sbjct: 115 ASSAATYG------GSDTFREDPAFE-RPLNVYGYSKLLFDQRMRRECGNDFRRSVAGKT 167
Query: 197 G-----RFHNIYGPFGTWKGGREKAPAAFCR-KALTSTDKFEMWGD------GLQTRSFT 244
G R+ N+YGP KG A AF + + K +++ D G Q R F
Sbjct: 168 GQVVGFRYFNVYGPHEQHKG--RMASVAFHQFHQFQAEGKVKLFADYGGYAAGAQMRDFI 225
Query: 245 FIDECVEGVLRLTKSDFREP-----VNIGSDEMVSMNEMAEIVL---------------S 284
FID+ V L F P N+G+ N++A V+ +
Sbjct: 226 FIDDVVAVNLWF----FDHPGVSGIFNLGTGRAQPFNDVASSVVNALRGLSGQTALGLEA 281
Query: 285 FEDKKLPIHHIPGPEGVRGR-----NSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQ 337
+ L I +IP P+ +RG+ +D + ++ P ++ G+ W+ +Q
Sbjct: 282 LTEAGL-IEYIPFPDALRGKYQSYTQADLSALRATGCDHPFADVQTGVSNYVQWLAQQ 338
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 146,127,385
Number of Sequences: 539616
Number of extensions: 6324813
Number of successful extensions: 14818
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 276
Number of HSP's that attempted gapping in prelim test: 14422
Number of HSP's gapped (non-prelim): 393
length of query: 375
length of database: 191,569,459
effective HSP length: 119
effective length of query: 256
effective length of database: 127,355,155
effective search space: 32602919680
effective search space used: 32602919680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)