BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017187
(375 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8R2R6|MTG1_MOUSE Mitochondrial GTPase 1 OS=Mus musculus GN=Mtg1 PE=2 SV=2
Length = 326
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 170/351 (48%), Gaps = 71/351 (20%)
Query: 27 WFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKDLAN 86
WFPGHMA + ++ LK D VIEV D+RIP S +P Q L K ++ LNK DLA+
Sbjct: 29 WFPGHMAKGLKKMQSSLKSVDCVIEVHDARIPFSGRNPLFQELLGLKPHLLVLNKMDLAD 88
Query: 87 PNILNKWVRH----------FDSCKQDYIAINAHSRSSVQKLLELVELKLKEVISREPTL 136
K V+ F +C +D + + V K++EL+ + + P
Sbjct: 89 LTEQQKIVQRLEEKGLSNVLFTNCVKD-----ENIKQIVPKVMELIRCSYRYHRAETPEY 143
Query: 137 LVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAG-FKIAHRPSI 195
+MVVGVPNVGKS+LINS+ + L K A VG PG+T+ + ++ RP +
Sbjct: 144 CIMVVGVPNVGKSSLINSLRRQHL------RTGKAARVGGEPGITRAVTSRIQVCERPLV 197
Query: 196 YVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVLNTRGTPLHWRHLNN 255
++LDTPGVL P I +ETGLKLAL G++ D +VGEE +A YLL LN G + +H
Sbjct: 198 FLLDTPGVLAPRIESVETGLKLALCGTVLDHLVGEETMADYLLYTLNRHGLFGYVQHYAL 257
Query: 256 RTEVSQSETENKHEYNLKDLRPKRRKPPNASDVTYIEDLVTGVQRALHVSLSEFDGNVED 315
+ Q E+ LK++ K RK T ++TG GNV
Sbjct: 258 ASACDQI------EWVLKNVAIKLRK-------TRKVKVLTGT------------GNV-- 290
Query: 316 ENDLESLIEQQFEVLQRALKIPHKASEARLMVSKKFLTLFRTGKLGPFILD 366
V+Q P A M ++ FL FR+G LG +LD
Sbjct: 291 ------------NVIQ-----PDYA-----MAARDFLRTFRSGLLGQVMLD 319
>sp|Q9BT17|MTG1_HUMAN Mitochondrial GTPase 1 OS=Homo sapiens GN=MTG1 PE=1 SV=2
Length = 334
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 133/226 (58%), Gaps = 20/226 (8%)
Query: 27 WFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKDLAN 86
WFPGHMA + ++ LK+ D +IEV D+RIPLS +P Q L K ++ LNK DLA+
Sbjct: 30 WFPGHMAKGLKKMQSSLKLVDCIIEVHDARIPLSGRNPLFQETLGLKPHLLVLNKMDLAD 89
Query: 87 PNILNKWVRHFDS-CKQDYIAINAHSRSSVQKLLELVELKLKEVISREP--------TLL 137
K ++H + ++ I N +V++++ +V E+I R
Sbjct: 90 LTEQQKIMQHLEGEGLKNVIFTNCVKDENVKQIIPMV----TELIGRSHRYHRKENLEYC 145
Query: 138 VMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDI-AGFKIAHRPSIY 196
+MV+GVPNVGKS+LINS+ + L K K VG PG+T+ + + +++ RP ++
Sbjct: 146 IMVIGVPNVGKSSLINSLRRQHL------RKGKATRVGGEPGITRAVMSKIQVSERPLMF 199
Query: 197 VLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVLN 242
+LDTPGVL P I +ETGLKLAL G++ D +VGEE +A YLL LN
Sbjct: 200 LLDTPGVLAPRIESVETGLKLALCGTVLDHLVGEETMADYLLYTLN 245
>sp|Q4PS77|MTG1_BOVIN Mitochondrial GTPase 1 OS=Bos taurus GN=MTG1 PE=2 SV=2
Length = 332
Score = 152 bits (384), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 128/227 (56%), Gaps = 22/227 (9%)
Query: 27 WFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKDLAN 86
WFPGHMA + ++ L++ D +IEV D++IPLS +P Q L K ++ LNK DLA+
Sbjct: 30 WFPGHMAKGLKKMQSSLRLVDCIIEVHDAQIPLSGRNPLFQETLGLKPHLLVLNKMDLAD 89
Query: 87 PNILNKWVRH----------FDSCKQDYIAINAHSRSSVQKLLELVELKLKEVISREPTL 136
K ++H F +C +D + + + + ELV +
Sbjct: 90 LKEQQKIIQHLEREGIKHVVFTNCVKD-----ENVKQVIPTVTELVGSSYRYHRGEHVEY 144
Query: 137 LVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAG-FKIAHRPSI 195
+MV+GVPNVGKS+LINS+ + L K K VG PG+T+ + ++ RP +
Sbjct: 145 CIMVIGVPNVGKSSLINSLRRQHL------RKGKATRVGGEPGITRAVMSRIQVCERPLM 198
Query: 196 YVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVLN 242
++LDTPGVL P IP +ETGLKLAL G++ D +VGEE +A +LL LN
Sbjct: 199 FLLDTPGVLAPRIPSVETGLKLALCGTVLDHLVGEETLADFLLYTLN 245
>sp|B7GGD6|RBGA_ANOFW Ribosome biogenesis GTPase A OS=Anoxybacillus flavithermus (strain
DSM 21510 / WK1) GN=rbgA PE=3 SV=1
Length = 284
Score = 148 bits (374), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 132/226 (58%), Gaps = 21/226 (9%)
Query: 24 NINWFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKD 83
I WFPGHMA A R + +LK+ D+V E+ D+RIP+SS +P + ++ K R+I LNK D
Sbjct: 5 TIQWFPGHMAKAKREVTEKLKLIDIVFELVDARIPMSSRNPLIDEIVANKPRIILLNKAD 64
Query: 84 LANPNILNKWVRHFDSCKQDYIAINAHSRSSVQKLLELVELKLK--------EVISREPT 135
+A+P++ +WV F + + D IAI++ S + V++++ + + KL+ + + R
Sbjct: 65 MADPDVTKQWVDFFAAQQIDAIAIDSQSGTGVKQMVAVAKEKLRSKFEKMMAKGMKRPRA 124
Query: 136 LLVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSI 195
+ ++VG+PNVGKS LIN + +++ G PGVT+ K+ +
Sbjct: 125 MRALIVGIPNVGKSTLINRLAGKHIAK-----------TGDTPGVTKAQQWIKVGK--EL 171
Query: 196 YVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVL 241
+LDTPG+L P D E G KLA +G+IKD+++ + +A Y L L
Sbjct: 172 ELLDTPGILWPKFEDEEVGYKLATTGAIKDTILNLQDVAVYALRFL 217
>sp|A9JTX2|MTG1_XENTR Mitochondrial GTPase 1 OS=Xenopus tropicalis GN=mtg1 PE=2 SV=1
Length = 311
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 143/275 (52%), Gaps = 28/275 (10%)
Query: 1 MGLKRIIKKGLGLGEMGFTKGGGNINWFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLS 60
M L +++K GE +WFPGHMA + +K +LK D ++EV D+RIPLS
Sbjct: 1 MRLSWLLRKSFDFGEREVA------HWFPGHMAKGLKQMKTKLKNLDCIVEVHDARIPLS 54
Query: 61 SAHPGLQPQLSAKRRVIALNKKDLAN----PNILNKWVRH------FDSCKQDYIAINAH 110
+P Q L K ++ LNK DLA+ IL + + F C +D +
Sbjct: 55 GRNPIFQDSLGMKPHLLILNKMDLADLTQKKRILAQLKQQGVGNVIFTDCVKD-----QN 109
Query: 111 SRSSVQKLLELVELKLKEVISREPTLLVMVVGVPNVGKSALINSIHQIALSRFPVQEKTK 170
+ V + ELV + +MV+GVPNVGKS+LIN++ ++ L K K
Sbjct: 110 IKHVVPVISELVGCSQRFHREENTETCIMVIGVPNVGKSSLINALRRMHL------RKGK 163
Query: 171 RATVGPLPGVTQDI-AGFKIAHRPSIYVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVG 229
+ VG PG+T+ + +++ P I++ DTPGVL P I +ETG+KLAL G+I D +VG
Sbjct: 164 ASRVGAEPGITRSVLTKIQVSESPLIFLFDTPGVLSPRIESVETGMKLALCGTILDHLVG 223
Query: 230 EERIAQYLLAVLNTRGTPLHWRHLNNRTEVSQSET 264
E+ +A YLL +LN + + H + ET
Sbjct: 224 EDIMADYLLYILNQQMQHRYVEHYGLEKPCADIET 258
>sp|E3TDS3|MTG1_ICTPU Mitochondrial GTPase 1 OS=Ictalurus punctatus GN=mtg1 PE=2 SV=1
Length = 320
Score = 145 bits (365), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 134/231 (58%), Gaps = 26/231 (11%)
Query: 26 NWFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKDLA 85
+WFPGHMA + ++ + D VIE+ D+RIP S +P Q L + ++ LNK DLA
Sbjct: 27 HWFPGHMAKGLKQMRASPRKVDCVIEIHDARIPFSGRNPLFQENLDVRPHLLILNKMDLA 86
Query: 86 NPN----ILNKWVRHFDSCKQDYIAINAHSR-SSVQKLLELVELKLKEVISREP------ 134
+ + IL + R D K + R +SV+K++ LV ++I P
Sbjct: 87 DTSDKMSILKQLER--DGVKNVLLTDCLKQRDTSVKKIIPLVT----DLIENAPRFHREE 140
Query: 135 --TLLVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDI-AGFKIAH 191
+ +MV+GVPNVGKS+LIN+I + L +K K + VG PG+T+ + ++
Sbjct: 141 NRSYCLMVIGVPNVGKSSLINAIRRTNL------KKGKASRVGGEPGITKAVLTKIQVCE 194
Query: 192 RPSIYVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVLN 242
RP I++LDTPGVL P I +IETG+KLAL G+I D +VGE+ IA YLL LN
Sbjct: 195 RPVIHLLDTPGVLPPKIENIETGMKLALCGTILDHLVGEDIIADYLLFSLN 245
>sp|C5D8U8|RBGA_GEOSW Ribosome biogenesis GTPase A OS=Geobacillus sp. (strain WCH70)
GN=rbgA PE=3 SV=1
Length = 283
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 129/226 (57%), Gaps = 21/226 (9%)
Query: 24 NINWFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKD 83
I WFPGHMA A R ++ +LK+ D+V E+ D+RIPLSS +P + L K R++ LNK D
Sbjct: 4 TIQWFPGHMAKAKREVQEKLKLIDIVFELLDARIPLSSRNPMIHEILGNKPRIVLLNKAD 63
Query: 84 LANPNILNKWVRHFDSCKQDYIAINAHSRSSVQKLLELVELKLKEVISREPT-------- 135
+A+ + +W+ +F+ + +AI+A + + +++++ + LK+ ++
Sbjct: 64 MADETVTEQWIAYFERQQLHALAIDAQTGTGIRQIVSAAKEMLKDKFAKMAAKGIKNPRP 123
Query: 136 LLVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSI 195
+ ++VG+PNVGKS LIN + +++ G PGVT+ K+ +
Sbjct: 124 MRALIVGIPNVGKSTLINRLAGRNIAK-----------TGDKPGVTKAQQWIKVGK--EM 170
Query: 196 YVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVL 241
+LDTPG+L P D E GLKLA +G+IKD+++ + +A Y L L
Sbjct: 171 ELLDTPGILWPKFEDEEVGLKLATTGAIKDTILNLQDVAVYALNFL 216
>sp|Q17EJ1|MTG1_AEDAE Mitochondrial GTPase 1 OS=Aedes aegypti GN=AAEL003813 PE=3 SV=1
Length = 316
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 135/244 (55%), Gaps = 39/244 (15%)
Query: 25 INWFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSA-KRRVIALNKKD 83
+NWFPGHM + ++ +LK D VIEV D+RIPLS + + +S K ++ LNKKD
Sbjct: 17 LNWFPGHMGKGMKQMQQKLKQVDCVIEVHDARIPLSGRNSEFRYTISGVKPHILVLNKKD 76
Query: 84 LANPNILNKWV----------RH--FDSCKQDYIAINAHSRSSVQKLLELVELKLKEVI- 130
+ + + V RH F +CK S + ++K++ L + ++I
Sbjct: 77 KIDRRLQGRVVDRLQQEDSEARHILFTNCKD-------QSCNGIRKVMPLAQ----DLIL 125
Query: 131 -------SREPTLLVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQD 183
+ + +M++GVPNVGKS+LIN + L+ K + VG + G+T+
Sbjct: 126 SSNRFNRADQKEYCIMIIGVPNVGKSSLINVLRNRHLN------KKGASQVGAVAGITRS 179
Query: 184 IAG-FKIAHRPSIYVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVLN 242
+ KI+ P +Y+LDTPG+L P+I D ETGL+LAL ++D +VGEE IA YLL +LN
Sbjct: 180 VLNKIKISEDPLVYLLDTPGILKPNIADTETGLRLALVSCLQDHLVGEELIADYLLYLLN 239
Query: 243 TRGT 246
RG
Sbjct: 240 KRGN 243
>sp|A8FD69|RBGA_BACP2 Ribosome biogenesis GTPase A OS=Bacillus pumilus (strain SAFR-032)
GN=rbgA PE=3 SV=1
Length = 282
Score = 139 bits (349), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 124/225 (55%), Gaps = 20/225 (8%)
Query: 24 NINWFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKD 83
I WFPGHMA A R + +LK+ D+V E+ D+RIP+SS +P ++ L K +++ LNK D
Sbjct: 2 TIQWFPGHMAKARREVTEKLKLIDIVFELTDARIPMSSRNPMIEEILQNKPKIMLLNKAD 61
Query: 84 LANPNILNKWVRHFDSCKQDYIAINAHSRSSVQKLLELVELKLKEVISR------EP-TL 136
A+P + +W HF+ +AIN+ + +++ + LKE R +P +
Sbjct: 62 KADPRVTKEWQAHFEQQGVRSLAINSVDGQGLNQIITTSKEILKEKFDRMKAKGVKPRAI 121
Query: 137 LVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIY 196
+++G+PNVGKS LIN + K A G PG+T K+ +
Sbjct: 122 RALIIGIPNVGKSTLINRLA-----------KKNIAKTGDRPGITTSQQWVKVGK--EME 168
Query: 197 VLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVL 241
+LDTPG+L P D + GL+LA++G+IKDS++ + +A Y L L
Sbjct: 169 LLDTPGILWPKFEDEKVGLRLAVTGAIKDSIINLQDVAVYGLRFL 213
>sp|Q819W8|RBGA_BACCR Ribosome biogenesis GTPase A OS=Bacillus cereus (strain ATCC 14579
/ DSM 31) GN=rbgA PE=3 SV=1
Length = 296
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 122/221 (55%), Gaps = 20/221 (9%)
Query: 25 INWFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKDL 84
I WFPGHMA A R + +LK+ D+VIE+ D+R+PLSS +P + ++ K R++ LNK D+
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 85 ANPNILNKWVRHFDSCKQDYIAINAHSRSSVQKLLELVELKLKEVIS-------REPTLL 137
A+ + +W+ +F I+INA + ++++ ++ +KE R +
Sbjct: 63 ADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 138 VMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIYV 197
++VG+PNVGKS LIN + K A G PGVT K+ + +
Sbjct: 123 ALIVGIPNVGKSTLINKLA-----------KKNIAKTGDRPGVTTAQQWIKVGK--EMEL 169
Query: 198 LDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLL 238
LDTPG+L P D GL+LA +G+IKDS++ + +A Y L
Sbjct: 170 LDTPGILWPKFEDQLVGLRLATTGAIKDSILNLQDVAVYAL 210
>sp|D5DJL5|RBGA_BACMD Ribosome biogenesis GTPase A OS=Bacillus megaterium (strain DSM
319) GN=rbgA PE=3 SV=1
Length = 288
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 132/250 (52%), Gaps = 22/250 (8%)
Query: 24 NINWFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKD 83
I WFPGHMA A R + +LK+ D+V E+ D+RIP SS +P + + K R++ LNK D
Sbjct: 2 TIQWFPGHMAKARRQVTEKLKLIDIVYELVDARIPQSSRNPMIDEIIVNKPRIVLLNKVD 61
Query: 84 LANPNILNKWVRHFDSCKQDYIAINAHSRSSVQKLL----ELVELKLKEV----ISREPT 135
A+P + +W+ ++ +AI+A + +++++ EL++ K + + +
Sbjct: 62 KADPRVTQQWLDYYKEQGIYALAIDAQAGKGMKQIVSSSKELLQEKFDRMRAKGVKKPRA 121
Query: 136 LLVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSI 195
+ M+VG+PNVGKS LIN + K A G PGVTQ K+ + +
Sbjct: 122 IRAMIVGIPNVGKSTLINRLAS-----------KKIAKTGDRPGVTQAQQWIKVGN--EL 168
Query: 196 YVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVLNTRGTPLHWRHLNN 255
+LDTPG+L P D G KLA +G+IKD+++ + +A Y L L T P + N
Sbjct: 169 ELLDTPGILWPKFEDETVGYKLATTGAIKDTILNMQDVAVYALRFL-TSHYPEQLKQRYN 227
Query: 256 RTEVSQSETE 265
E+ + E
Sbjct: 228 LNEIPEDIVE 237
>sp|Q65JP4|RBGA_BACLD Ribosome biogenesis GTPase A OS=Bacillus licheniformis (strain DSM
13 / ATCC 14580) GN=rbgA PE=3 SV=1
Length = 283
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 127/224 (56%), Gaps = 20/224 (8%)
Query: 25 INWFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKDL 84
I WFPGHMA A R + +LK+ D+V E+ D+RIP+SS +P ++ L K R++ LNK D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
Query: 85 ANPNILNKWVRHFDSCKQDYIAINAHSRSSVQKLL----ELVELKLKEVISR--EP-TLL 137
A+ ++ W +HF+ +AIN+ + + ++L EL++ K ++ ++ +P +
Sbjct: 63 ADSSVTKAWKQHFEKDGIPTLAINSVNGQGLNQILPASKELLKEKFDKMKAKGVKPRAIR 122
Query: 138 VMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIYV 197
++VG+PNVGKS LIN + K A G PGVT K+ + +
Sbjct: 123 ALIVGIPNVGKSTLINRLA-----------KKNIAKTGDRPGVTTAQQWVKVGK--ELEL 169
Query: 198 LDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVL 241
LDTPG+L P D GL+LA +G+IKDS++ + +A Y L L
Sbjct: 170 LDTPGILWPKFEDELVGLRLAATGAIKDSIINLQDVAVYGLRFL 213
>sp|Q29AU5|MTG1_DROPS Mitochondrial GTPase 1 OS=Drosophila pseudoobscura pseudoobscura
GN=GA14342 PE=3 SV=2
Length = 320
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 164/360 (45%), Gaps = 78/360 (21%)
Query: 25 INWFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSA---KRRVIALNK 81
INWFPGHM R I+ +L+ D ++E+ DSRIPL+ + ++ K ++ LNK
Sbjct: 20 INWFPGHMNKGMRQIQQKLRNVDCIVEIHDSRIPLAGRNSQFFDTITGSGVKPHILVLNK 79
Query: 82 KDLANP----NILNKWVRH--------FDSCKQDYIAINAHSRSSVQKL-LELVELKLKE 128
DL P ++L + R F +CK H + L +LV +
Sbjct: 80 VDLLGPKQQRSVLQQLRRQQPELKNILFTNCKDQ----RNHGVLDILPLATQLVGDSSRY 135
Query: 129 VISREPTLLVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAG-F 187
++ +M++GVPNVGKS++IN + + L +K A VG GVT+ +
Sbjct: 136 NRAQSAEHNIMIIGVPNVGKSSIINVLRNVHL------KKRSAARVGAEAGVTRAVGERI 189
Query: 188 KIAHRPSIYVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVLNTRGTP 247
KI +P++Y++DTPG+L PS+ D E G+KLAL G + D +VGE+ IA YLL LN
Sbjct: 190 KIQEKPAVYMIDTPGILQPSVTDDEMGMKLALVGCLPDHIVGEDLIADYLLYWLN----- 244
Query: 248 LHWRHLNNRTEVSQSETENKHEYNLKDLRPKRRKPPNASDVTYIEDLVTGVQRALHVSLS 307
++EY ++ L N S V G+ H +
Sbjct: 245 ----------------KHRRYEY-VEKLSLSSGPSDNISAVLAEYAQTHGM---FH-RVK 283
Query: 308 EFDGNVEDENDLESLIEQQFEVLQRALKIPHKASEARLMVSKKFLTLFRTGKLGPFILDD 367
++DG VE +L L ++KF+ FRTG+LG LD+
Sbjct: 284 QYDGQVEVMTNL-------------------------LAAARKFIQFFRTGQLGSINLDE 318
>sp|O31743|RBGA_BACSU Ribosome biogenesis GTPase A OS=Bacillus subtilis (strain 168)
GN=rbgA PE=1 SV=1
Length = 282
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 124/225 (55%), Gaps = 20/225 (8%)
Query: 24 NINWFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKD 83
I WFPGHMA A R + +LK+ D+V E+ D+RIP+SS +P ++ L K R++ LNK D
Sbjct: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
Query: 84 LANPNILNKWVRHFDSCKQDYIAINAHSRSSVQKLLELVELKLKEVISR------EP-TL 136
A+ + +W HF++ ++IN+ + + +++ + L+E R +P +
Sbjct: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
Query: 137 LVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIY 196
+++G+PNVGKS LIN + K A G PG+T K+ +
Sbjct: 122 RALIIGIPNVGKSTLINRLA-----------KKNIAKTGDRPGITTSQQWVKVGK--ELE 168
Query: 197 VLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVL 241
+LDTPG+L P D GL+LA++G+IKDS++ + +A + L L
Sbjct: 169 LLDTPGILWPKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFL 213
>sp|E0TTS5|RBGA_BACPZ Ribosome biogenesis GTPase A OS=Bacillus subtilis subsp. spizizenii
(strain ATCC 23059 / NRRL B-14472 / W23) GN=rbgA PE=3
SV=1
Length = 282
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 124/225 (55%), Gaps = 20/225 (8%)
Query: 24 NINWFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKD 83
I WFPGHMA A R + +LK+ D+V E+ D+RIP+SS +P ++ L K R++ LNK D
Sbjct: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
Query: 84 LANPNILNKWVRHFDSCKQDYIAINAHSRSSVQKLLELVELKLKEVISR------EP-TL 136
A+ + +W HF++ ++IN+ + + +++ + L+E R +P +
Sbjct: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
Query: 137 LVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIY 196
+++G+PNVGKS LIN + K A G PG+T K+ +
Sbjct: 122 RALIIGIPNVGKSTLINRLA-----------KKNIAKTGDRPGITTSQQWVKVGK--ELE 168
Query: 197 VLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVL 241
+LDTPG+L P D GL+LA++G+IKDS++ + +A + L L
Sbjct: 169 LLDTPGILWPKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFL 213
>sp|Q9VCU5|MTG1_DROME Mitochondrial GTPase 1 OS=Drosophila melanogaster GN=CG17141 PE=1
SV=2
Length = 323
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 161/363 (44%), Gaps = 84/363 (23%)
Query: 25 INWFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSA---KRRVIALNK 81
INWFPGHM R I+ +L+ D ++E+ D+RIPL+ + ++ K ++ LNK
Sbjct: 20 INWFPGHMTKGMRQIQQKLRNVDCIVEIHDARIPLAGRNSQFFDTITGSGVKPHILVLNK 79
Query: 82 KDL----ANPNILNKWVRH--------FDSCKQDYIAINAHSRSSVQKLLELVELKLKEV 129
DL ++L + R F +CK + V +L L + E
Sbjct: 80 VDLLGAKQQKSVLQQLRRQQPELQHILFTNCKD-------QRNNGVLDILPLATRLVSES 132
Query: 130 ISREPTLL----VMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIA 185
T +M++GVPNVGKS++IN + + L +K A VG G+T+ +
Sbjct: 133 SRFNRTQAAEHNLMIIGVPNVGKSSVINVLRNVHL------KKKSAARVGAEAGITRSVG 186
Query: 186 G-FKIAHRPSIYVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVLNTR 244
KI P +Y++DTPG+L PSI D E G+KLAL G + D +VGE+ IA YLL LN+
Sbjct: 187 ERIKIQENPPVYMIDTPGILQPSIKDDEMGMKLALVGCLPDHIVGEDLIADYLLYWLNSH 246
Query: 245 GTPLHWRHLNNRTEVSQSETENKHEYNLKDLRPKRRKPPNASDVTYIEDLVTGVQRALHV 304
+Y+ ++ P + D++ + + H
Sbjct: 247 -----------------------RKYDYVEMLKLSSGP--SDDISAVLAEYAHREELFH- 280
Query: 305 SLSEFDGNVEDENDLESLIEQQFEVLQRALKIPHKASEARLMVSKKFLTLFRTGKLGPFI 364
+ ++DG VE +L L ++KF+ FR+G+LG
Sbjct: 281 KVKQYDGRVEVMTNL-------------------------LAAARKFIHFFRSGQLGHMN 315
Query: 365 LDD 367
LD+
Sbjct: 316 LDE 318
>sp|O74776|MTG1_SCHPO Mitochondrial GTPase 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=mtg1 PE=3 SV=1
Length = 328
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 126/238 (52%), Gaps = 29/238 (12%)
Query: 27 WFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKDLAN 86
W+PGHM + +K+ +D+ +EVRD+RIPL+S + ++ L+ K R+I NK DLA+
Sbjct: 17 WYPGHMNKTLKRLKNLTSSNDIFVEVRDARIPLTSRNYVMEDFLNKKNRIIVYNKCDLAD 76
Query: 87 P---------NILNKWVRHFDSCKQDYIAINAHSRSSV------------QKLLELVELK 125
+ + + F + + + + +S+ ++LL L+
Sbjct: 77 TFHTKAKVSKHRIQNLAQQFQNVECWFKETSTPEKSAFITPYVSKAPYFAKELLRLIR-T 135
Query: 126 LKEVISREPTLLVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIA 185
L + S + V VG+PN GKS+++NS+ +AL K+K A VG PGVT+ I+
Sbjct: 136 LVDQASANGRVYVYFVGMPNTGKSSILNSLRNVAL------RKSKSAIVGNYPGVTKRIS 189
Query: 186 GF-KIAHRPSIYVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVLN 242
++ + +Y+LDTPG++ PSI E LKL+L G +K+ +V + YLL LN
Sbjct: 190 EIVRLFNDMDVYMLDTPGIMTPSITKPEDMLKLSLVGCVKEGIVHPVTVVDYLLFHLN 247
>sp|B6JW87|MTG1_SCHJY Mitochondrial GTPase 1 OS=Schizosaccharomyces japonicus (strain
yFS275 / FY16936) GN=mtg1 PE=3 SV=1
Length = 328
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 128/245 (52%), Gaps = 42/245 (17%)
Query: 27 WFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKDLAN 86
WFPGHM + ++ + +D+++EVRD+RIPLSS +P L+ + ++RV+ NK DLA
Sbjct: 4 WFPGHMKTTLKRLRDSVSKNDVIVEVRDARIPLSSRNPALETLAANRKRVVVYNKCDLAF 63
Query: 87 PNILNKWVRHFDSCKQDYI-AINAHSRSSVQKL--LELVELKLKEV--ISREP------- 134
P+ D CK + ++ A + V+ L E ++ + V +S P
Sbjct: 64 PSA-------GDLCKTRALNSVRAFEETYVETLARWETIQTLRRYVGTVSNVPECIKRLL 116
Query: 135 ----------------TLLVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLP 178
T+ V VVG+PNVGKS+++N++ +L R V A VG P
Sbjct: 117 QLLQKLTYSDHAASNRTVKVFVVGMPNVGKSSVMNALRHASLHRRKV------AVVGSHP 170
Query: 179 GVTQDIAG-FKIAHRPSIYVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYL 237
GVT+++ ++ ++Y++DTPG+++P+I E +K AL ++KD + + YL
Sbjct: 171 GVTRNVGEVVRLFEGKNVYMVDTPGIMLPTILQPEDAIKFALVHAMKDGRLHNAVVVDYL 230
Query: 238 LAVLN 242
L LN
Sbjct: 231 LYRLN 235
>sp|Q9WZM6|RBGA_THEMA Ribosome biogenesis GTPase A OS=Thermotoga maritima (strain ATCC
43589 / MSB8 / DSM 3109 / JCM 10099) GN=rbgA PE=1 SV=1
Length = 262
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 114/218 (52%), Gaps = 27/218 (12%)
Query: 25 INWFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKDL 84
++W+PGH+ A R IK L++ + V+EVRD+R P +++ G+ S K +I LNK D+
Sbjct: 1 MSWYPGHIEKAKRQIKDLLRLVNTVVEVRDARAPFATSAYGV--DFSRKETIILLNKVDI 58
Query: 85 ANPNILNKWVRHFDSCKQDYIAINAHSRSSVQKLLELVELKLKEVISREPTLLVMVVGVP 144
A+ KWV F KQ I H + LL+ + + ++R V++VGVP
Sbjct: 59 ADEKTTKKWVEFFK--KQGKRVITTHKGEPRKVLLKKLSF---DRLAR-----VLIVGVP 108
Query: 145 NVGKSALINSIHQIALSRFPVQEKTKRA-TVGPLPGVTQDIAGFKIAHRPSIYVLDTPGV 203
N GKS +IN + K KRA +VG PG+T+ I F + + + +LDTPG+
Sbjct: 109 NTGKSTIINKL------------KGKRASSVGAQPGITKGIQWFSLEN--GVKILDTPGI 154
Query: 204 LVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVL 241
L +I + KL L GS+ + ++RI + +
Sbjct: 155 LYKNIFSEDLAAKLLLVGSLPVERIEDQRIFERAFEIF 192
>sp|Q03151|MTG1_YEAST Mitochondrial GTPase 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=MTG1 PE=1 SV=1
Length = 367
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 116/232 (50%), Gaps = 17/232 (7%)
Query: 28 FPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIAL---NKKDL 84
F GH A + + L +++IE+RD R PLS+ + + V+ L +KDL
Sbjct: 34 FKGHQVKALKTFEKLLPQMNMIIELRDIRAPLSTRNVVFDRIARKEHDVMKLVVYTRKDL 93
Query: 85 --ANPNILNKWVRHFDSCKQDYIAINAHSRSSVQKLLELVELKLKEVISREPTL----LV 138
N + K + + +I ++ +++ V+ LL+++E + E+ + L
Sbjct: 94 MPGNKPYIGKLKNWHEELGEKFILLDCRNKTDVRNLLKILEWQNYELETNGGYLPMGYRA 153
Query: 139 MVVGVPNVGKSALINSIHQIALSRFPVQEKTKR-ATVGPLPGVTQ------DIAGFKIAH 191
++ G+PNVGKS LINS+ I ++ + K K+ A G GVT+ +
Sbjct: 154 LITGMPNVGKSTLINSLRTIFHNQVNMGRKFKKVAKTGAEAGVTRATSEVIRVTSRNTES 213
Query: 192 RPSIYVLDTPGVLVPS-IPDIETGLKLALSGSIKDSVVGEERIAQYLLAVLN 242
R IY++DTPG+ VP + D L LAL GS+K+++V A YLL ++N
Sbjct: 214 RNEIYLIDTPGIGVPGRVSDHNRMLGLALCGSVKNNLVDPIFQADYLLYLMN 265
>sp|P75135|RBGA_MYCPN Probable ribosome biogenesis GTPase A OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=rbgA PE=1 SV=1
Length = 271
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 25 INWFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKDL 84
INWFPGHM +K D VIEV D+R P + +P + + K ++ K DL
Sbjct: 10 INWFPGHMKKTHDQLKKLASSLDGVIEVVDARAPTLTQNPEITAYFTNKPKLTLALKADL 69
Query: 85 ----ANPNILNKWVRHFDSCKQDYIAINAHSRSSVQKLLELVELKLKEVISREPTLLV-- 138
AN NIL + + KQ R ++KL L + K ++ + LLV
Sbjct: 70 AQTVANSNIL------WGTLKQGL----QLKRLVIKKLQTLFQAKKNQL--KAKGLLVHQ 117
Query: 139 ---MVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSI 195
V+G+PNVGKS+LIN + L++ +Q V GVT+ ++ +I+
Sbjct: 118 FRLAVIGMPNVGKSSLIN----LLLNKNHLQ-------VANRAGVTKSMSWNQIS--SEF 164
Query: 196 YVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVLNTRGTPLHWRHLNN 255
Y+ DTPGV I ++ G KL L+ IK VV E + + L+ H+ L
Sbjct: 165 YLSDTPGVFFKRIDEMAVGYKLVLTNVIKREVVPLEDVGAFAFCYLSK-----HYPQLLP 219
Query: 256 RTEVSQSETENKHEYNLKDLRPKRRKPPNASDVTYIEDLVTG 297
+E +K + K L+ + N + ++ +L+ G
Sbjct: 220 YEGTDFTEFLHKFAISRKLLQKSNQLNINLACELFVSELING 261
>sp|Q49435|RBGA_MYCGE Probable ribosome biogenesis GTPase A OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=rbgA PE=3
SV=1
Length = 270
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 105/240 (43%), Gaps = 31/240 (12%)
Query: 19 TKGGGNINWFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIA 78
T INWFPGHM +K D +IE+ D+R P + + + K ++I
Sbjct: 3 TYTSAKINWFPGHMKKIHDQLKKLSSQIDGIIEIVDARAPTLTHNSEIISYFLNKPKLIL 62
Query: 79 LNKKDLA----NPNILNKWVRHFDSCKQDYIAINAHSRSSVQKLL-ELVELKLKEVISRE 133
K DLA N IL F S K+ + ++ + +LK K ++ ++
Sbjct: 63 ALKTDLAQYKPNKKIL------FGSLKEPFKLKKKVLKTLTTLFANKRQQLKAKGLLIKQ 116
Query: 134 PTLLVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRP 193
L V+G+PNVGKS+LIN + V G+T+ + +I+ P
Sbjct: 117 FRL--AVIGMPNVGKSSLINLLIN-----------KNHLKVANRAGITKSLNWIQIS--P 161
Query: 194 SIYVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVLNTRGTPLHWRHL 253
+ + DTPGV + I +I+ G KL L+ I+ VV E + + L H++ L
Sbjct: 162 ELLLSDTPGVFLKRIDEIQIGYKLVLTNVIRREVVNIEEVGMFAFNYLKK-----HYKQL 216
>sp|Q21086|GNL3_CAEEL Guanine nucleotide-binding protein-like 3 homolog OS=Caenorhabditis
elegans GN=nst-1 PE=3 SV=1
Length = 556
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 109/215 (50%), Gaps = 36/215 (16%)
Query: 32 MAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQL--SAKRRVIALNKKDLANPNI 89
+ A ++ ++I+D++I+V D+R PL S ++ Q+ KR V+ LNK DL
Sbjct: 134 IKAYASEVRKTVEIADVIIQVLDARDPLGSRSKSVEDQVLKGGKRLVLLLNKIDLVPREN 193
Query: 90 LNKWVRH---------FDSCKQDYIAINAHSRSSVQKLLELVELKLKEVISR-------- 132
+ KW+ + F + Q+ + S++ E + +++ +
Sbjct: 194 VQKWLEYLRGQFPTIAFKASTQEQKSNIGRFNSAILNNTETSKCVGADIVMKILANYCRN 253
Query: 133 ---EPTLLVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFKI 189
+ ++ V VVG PNVGKS++INS+ ++ K VG LPG+T++I ++
Sbjct: 254 KDIKTSIRVGVVGFPNVGKSSVINSL-----------KRRKACNVGNLPGITKEIQEVEL 302
Query: 190 AHRPSIYVLDTPGVLVPSIPDIETGLKLALSGSIK 224
+I ++D+PGV++ S D++ +++AL +I+
Sbjct: 303 DK--NIRLIDSPGVILVSQKDLDP-IEVALKNAIR 334
>sp|Q6C036|NOG2_YARLI Nucleolar GTP-binding protein 2 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=NOG2 PE=3 SV=1
Length = 509
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 106/227 (46%), Gaps = 41/227 (18%)
Query: 46 SDLVIEVRDSRIPL----SSAHPGLQPQLSAKRRVIALNKKDLANPNILNKWVRHFDSCK 101
SD+VI V D+R PL +S ++ + K + LNK DL + WV+H
Sbjct: 214 SDVVIHVLDARDPLGTRCTSVEQYIKKEAPHKHLIFVLNKCDLVPTWVAAAWVKHLS--- 270
Query: 102 QDY--IAINAHSRSSVQKLLELVELKLKEVISREP---TLLVMVVGVPNVGKSALINSIH 156
QDY +A +A +S K L++L L++ + P + V +G PN GKS++IN++
Sbjct: 271 QDYPTLAFHASITNSFGKG-SLIQL-LRQYSALHPDRQQISVGFIGYPNTGKSSIINTLR 328
Query: 157 QIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIYVLDTPGVLVPSIPDIETGLK 216
K K P+PG T+ + R I+++D PG++ PS D ET +
Sbjct: 329 -----------KKKVCKTAPIPGETKVWQYITLMKR--IFLIDCPGIVPPSQKDSETDI- 374
Query: 217 LALSGSIKDSVVGEERIA---QYLLAVLNTRGTPLHWRHLNNRTEVS 260
+ VV E ++ QY+ A+L T +HL EVS
Sbjct: 375 ------LFRGVVRVEHVSYPEQYIPALLERCET----KHLERTYEVS 411
>sp|J9VQ03|NOG2_CRYNH Nucleolar GTP-binding protein 2 OS=Cryptococcus neoformans var.
grubii serotype A (strain H99 / ATCC 208821 / CBS 10515
/ FGSC 9487) GN=NOG2 PE=3 SV=2
Length = 720
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 21/177 (11%)
Query: 43 LKISDLVIEVRDSRIPLSS-AHP---GLQPQLSAKRRVIALNKKDLANPNILNKWVRHFD 98
L SD+VI V D+R PL + P L+ + + K V LNK DL + +WV+H
Sbjct: 232 LDSSDVVIHVLDARDPLGTRCKPVVEYLRKEKAHKHLVYVLNKVDLVPTWVTARWVKHL- 290
Query: 99 SCKQDYIAINAHSRSSVQK--LLELVELKLKEVISREPTLLVMVVGVPNVGKSALINSIH 156
S IA +A +S K L++L+ + + S + + V +G PN GKS++IN++
Sbjct: 291 SLSAPTIAFHASINNSFGKGSLIQLLR-QFSVLHSDKKQISVGFIGYPNTGKSSIINTL- 348
Query: 157 QIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIYVLDTPGVLVPSIPDIET 213
+K K TV P+PG T+ + R IY++D PG++ S D +T
Sbjct: 349 ----------KKKKVCTVAPIPGETKVWQYITLMRR--IYLIDCPGIVPVSAKDSDT 393
>sp|P0CS94|NOG2_CRYNV Nucleolar GTP-binding protein 2 OS=Cryptococcus neoformans var.
grubii GN=NOG2 PE=3 SV=1
Length = 693
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 21/177 (11%)
Query: 43 LKISDLVIEVRDSRIPLSS-AHP---GLQPQLSAKRRVIALNKKDLANPNILNKWVRHFD 98
L SD+VI V D+R PL + P L+ + + K V LNK DL + +WV+H
Sbjct: 205 LDSSDVVIHVLDARDPLGTRCKPVVEYLRKEKAHKHLVYVLNKVDLVPTWVTARWVKHL- 263
Query: 99 SCKQDYIAINAHSRSSVQK--LLELVELKLKEVISREPTLLVMVVGVPNVGKSALINSIH 156
S IA +A +S K L++L+ + + S + + V +G PN GKS++IN++
Sbjct: 264 SLSAPTIAFHASINNSFGKGSLIQLLR-QFSVLHSDKKQISVGFIGYPNTGKSSIINTL- 321
Query: 157 QIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIYVLDTPGVLVPSIPDIET 213
+K K TV P+PG T+ + R IY++D PG++ S D +T
Sbjct: 322 ----------KKKKVCTVAPIPGETKVWQYITLMRR--IYLIDCPGIVPVSAKDSDT 366
>sp|Q6FWS1|NOG2_CANGA Nucleolar GTP-binding protein 2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=NOG2 PE=3 SV=1
Length = 494
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 35/224 (15%)
Query: 46 SDLVIEVRDSRIPL----SSAHPGLQPQLSAKRRVIALNKKDLANPNILNKWVRHFDSCK 101
SD+VI V D+R PL S ++ + K + LNK DL + WV+H S
Sbjct: 222 SDVVIHVLDARDPLGTRCKSVEEYMKKETPHKHLIYVLNKCDLVPTWVAAAWVKHL-SKD 280
Query: 102 QDYIAINAHSRSSVQK--LLELVELKLKEVISREPTLLVMVVGVPNVGKSALINSIHQIA 159
+ +A +A +S K L++L+ + ++ + + V +G PN GKS++IN++
Sbjct: 281 RPTLAFHASITNSFGKGSLIQLLR-QFSQLHTDRKQISVGFIGYPNTGKSSIINTLR--- 336
Query: 160 LSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIYVLDTPGVLVPSIPDIETGLKLAL 219
K K V P+PG T+ + R I+++D PG++ PS D E +
Sbjct: 337 --------KKKVCQVAPIPGETKVWQYITLMKR--IFLIDCPGIVPPSTKDSEEDILFR- 385
Query: 220 SGSIKDSVVGEERIA---QYLLAVLNTRGTPLHWRHLNNRTEVS 260
VV E ++ QY+ VL T +HL E+S
Sbjct: 386 ------GVVRVEHVSHPEQYIPGVLKRCQT----KHLERTYEIS 419
>sp|P53742|NOG2_YEAST Nucleolar GTP-binding protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=NOG2 PE=1 SV=1
Length = 486
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 4 KRIIKKGLGL------GEMGFTKGGGNINWFPGHMAAATRAIKHRLKISDLVIEVRDSRI 57
K+++ LGL E G+T + G + + SD+VI V D+R
Sbjct: 174 KQVLDATLGLMGNQEDKENGWTSAAKEAIFSKGQSKRIWNELYKVIDSSDVVIHVLDARD 233
Query: 58 PLS----SAHPGLQPQLSAKRRVIALNKKDLANPNILNKWVRHFDSCKQDYIAINAHSRS 113
PL S ++ + K + LNK DL + WV+H S ++ +A +A +
Sbjct: 234 PLGTRCKSVEEYMKKETPHKHLIYVLNKCDLVPTWVAAAWVKHL-SKERPTLAFHASITN 292
Query: 114 SVQK--LLELVELKLKEVISREPTLLVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKR 171
S K L++L+ + ++ + + V +G PN GKS++IN++ K K
Sbjct: 293 SFGKGSLIQLLR-QFSQLHTDRKQISVGFIGYPNTGKSSIINTLR-----------KKKV 340
Query: 172 ATVGPLPGVTQDIAGFKIAHRPSIYVLDTPGVLVPSIPDIE 212
V P+PG T+ + R I+++D PG++ PS D E
Sbjct: 341 CQVAPIPGETKVWQYITLMKR--IFLIDCPGIVPPSSKDSE 379
>sp|Q75DA4|NOG2_ASHGO Nucleolar GTP-binding protein 2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NOG2
PE=3 SV=1
Length = 502
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 29/221 (13%)
Query: 46 SDLVIEVRDSRIPLS----SAHPGLQPQLSAKRRVIALNKKDLANPNILNKWVRHFDSCK 101
SD+VI V D+R PL S ++ + K + LNK DL + WV+H S
Sbjct: 221 SDVVIHVLDARDPLGTRCKSVEEYMKKETPHKHLIYVLNKCDLVPTWLAAAWVKHL-SKD 279
Query: 102 QDYIAINAHSRSSVQK--LLELVELKLKEVISREPTLLVMVVGVPNVGKSALINSIHQIA 159
+ +A +A +S K L++L+ + ++ + V +G PN GKS++IN++
Sbjct: 280 RPTLAFHASITNSFGKGSLIQLLR-QFSQLHKDRQQISVGFIGYPNTGKSSIINTLR--- 335
Query: 160 LSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIYVLDTPGVLVPSIPDIETGLKLAL 219
K K V P+PG T+ + R I+++D PG++ PS D E +
Sbjct: 336 --------KKKVCQVAPIPGETKVWQYITLMKR--IFLIDCPGIVPPSAKDTEED--ILF 383
Query: 220 SGSIKDSVVGEERIAQYLLAVLNTRGTPLHWRHLNNRTEVS 260
G ++ V QY+ AVL R H HL E+S
Sbjct: 384 RGVVRVEHVSHPE--QYIPAVL--RRCKRH--HLERTYEIS 418
>sp|P40010|NUG1_YEAST Nuclear GTP-binding protein NUG1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NUG1 PE=1 SV=1
Length = 520
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 27/191 (14%)
Query: 34 AATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQP---QLSAKRRVIALNKKDLANPNIL 90
A + K + SD+++ V D+R P S+ ++ Q KR ++ LNK DL P++L
Sbjct: 164 AYDKIFKSVIDASDVILYVLDARDPESTRSRKVEEAVLQSQGKRLILILNKVDLIPPHVL 223
Query: 91 NKWVRHFDSC------KQDYIAINAHS-------RSSVQKLLELVELKLKEVISR-EPTL 136
+W+ + S + A+N S ++ LLE LK S + ++
Sbjct: 224 EQWLNYLKSSFPTIPLRASSGAVNGTSFNRKLSQTTTASALLE--SLKTYSNNSNLKRSI 281
Query: 137 LVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIY 196
+V V+G PNVGKS++IN++ L+R Q +K VG GVT + KI ++ +
Sbjct: 282 VVGVIGYPNVGKSSVINAL----LARRGGQ--SKACPVGNEAGVTTSLREIKIDNK--LK 333
Query: 197 VLDTPGVLVPS 207
+LD+PG+ PS
Sbjct: 334 ILDSPGICFPS 344
>sp|Q7SHR8|NOG2_NEUCR Nucleolar GTP-binding protein 2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=nog-2 PE=3 SV=1
Length = 619
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 93/205 (45%), Gaps = 29/205 (14%)
Query: 46 SDLVIEVRDSRIPLSSAHPGLQPQLSA----KRRVIALNKKDLANPNILNKWVRHFD--- 98
SD+++ V D+R PL + ++ L+ K + LNK DL W+R
Sbjct: 232 SDVILHVIDARDPLGTRCRHVEKYLATEAPHKHLIFVLNKIDLVPSKTAAAWIRVLQKDH 291
Query: 99 -SCKQDYIAINAHSRSSVQKLLELVELKLKEVISREPTLLVMVVGVPNVGKSALINSIHQ 157
+C N R S+ LL + K+ + V +VG PNVGKS++IN
Sbjct: 292 PTCAMRSSIKNPFGRGSLIDLLRQFSILHKD----RKQISVGLVGYPNVGKSSIIN---- 343
Query: 158 IALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIYVLDTPGVLVPSIPDIETGLKL 217
AL PV A V P+PG T+ + R IY++D PG++ P+ D T L
Sbjct: 344 -ALRGKPV------AKVAPIPGETKVWQYVTLMRR--IYLIDCPGIVPPNQND--TPQDL 392
Query: 218 ALSGSIKDSVVGEERIAQYLLAVLN 242
L G ++ V + QY+ AVLN
Sbjct: 393 LLRGVVR--VENVDNPEQYIPAVLN 415
>sp|Q6CSP9|NOG2_KLULA Nucleolar GTP-binding protein 2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=NOG2 PE=3 SV=1
Length = 513
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 15 EMGFTKGGGNINWFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSA-- 72
E G+T+ + G + + SD+VI V D+R PL + + ++
Sbjct: 190 EDGWTQAAKEAIFHKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVTDYMTNET 249
Query: 73 --KRRVIALNKKDLANPNILNKWVRHFDSCKQDYIAINAHSRSSVQK--LLELVELKLKE 128
K + LNK DL + WV+H S ++ +A +A +S K L++L+ + +
Sbjct: 250 PHKHLIYVLNKCDLVPTWVAAAWVKHL-SKERPTLAFHASITNSFGKGSLIQLLR-QFSQ 307
Query: 129 VISREPTLLVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFK 188
+ + V +G PN GKS++IN++ K K V P+PG T+
Sbjct: 308 LHKDRHQISVGFIGYPNTGKSSIINTLR-----------KKKVCQVAPIPGETKVWQYIT 356
Query: 189 IAHRPSIYVLDTPGVLVPSIPDIE 212
+ R I+++D PG++ PS D E
Sbjct: 357 LMKR--IFLIDCPGIVPPSSKDSE 378
>sp|Q3T0J9|GNL3L_BOVIN Guanine nucleotide-binding protein-like 3-like protein OS=Bos
taurus GN=GNL3L PE=2 SV=1
Length = 575
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 50/224 (22%)
Query: 25 INWFPGHMAAATRAIKHR-----LKISDLVIEVRDSRIPLSSAHPGLQPQL----SAKRR 75
+N FP ATR ++ ++ SD+++EV DSR PL ++ + K+
Sbjct: 102 LNMFPQLDDEATRKAYYKEFHKVVEYSDVILEVLDSRDPLGCRCFQMEETVLRAEGNKKL 161
Query: 76 VIALNKKDLANPNILNKWVRHFDSCKQDYIAINAHSRSSVQKLLELVE---------LKL 126
V+ LNK DL ++ KW+ + + + +A A ++ V+ L LK
Sbjct: 162 VLVLNKIDLVPKEVVEKWLEYLRN-ELPTVAFKASTQHQVKNLNRCSVPVDQASESLLKS 220
Query: 127 KEVISREPTLLVM----------------VVGVPNVGKSALINSIHQIALSRFPVQEKTK 170
K E + V+ VVG+PNVGKS+LINS+ ++++
Sbjct: 221 KACFGAENLMRVLGNYCRLGEVRTHIRVGVVGLPNVGKSSLINSL-----------KRSR 269
Query: 171 RATVGPLPGVTQDIAGFKIAHRPSIYVLDTPGVLVPSIPDIETG 214
+VG +PGVT+ + ++ I +LD PG+ VP P+ E G
Sbjct: 270 ACSVGAVPGVTKFMQ--EVYLDKFIRLLDAPGI-VPG-PNSEVG 309
>sp|O74791|GRN1_SCHPO GTPase grn1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=grn1 PE=1 SV=1
Length = 470
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 111/231 (48%), Gaps = 33/231 (14%)
Query: 34 AATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSA-----KRRVIALNKKDLANPN 88
A + K ++ SD+++ V D+R P + ++ Q+ A KR + +NK DL
Sbjct: 151 AYDKEFKKVVEASDVILYVLDARDPEGTRSKDVERQVLASSAEEKRLIFVINKIDLVPSE 210
Query: 89 ILNKWV---RHF----------DSCKQDYIAINAHSRSSVQKLLELVELKLKEVISRE-- 133
+LNKWV R+F S + +A + S++ LL+ LK +++
Sbjct: 211 VLNKWVTYLRNFFPTIPMRSASGSGNSNLKHQSASASSTISNLLK----SLKSYSAKKKL 266
Query: 134 -PTLLVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHR 192
+L V V+G PNVGKS++IN AL ++ G + G+T + K+ ++
Sbjct: 267 KSSLTVGVIGYPNVGKSSVIN-----ALVNRSANGRSAPCPAGNVAGMTTSLREVKLDNK 321
Query: 193 PSIYVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEE-RIAQYLLAVLN 242
+ ++D+PG++ PS + +L + ++ + V + +A Y+L L+
Sbjct: 322 --LRLVDSPGIVFPSSDSKDDLYRLVMLNAVSSTKVDDPVAVASYILQFLS 370
>sp|Q9C3Z4|NOG2_PNECA Nucleolar GTP-binding protein 2 OS=Pneumocystis carinii GN=NOG2
PE=2 SV=1
Length = 483
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 107/231 (46%), Gaps = 39/231 (16%)
Query: 46 SDLVIEVRDSRIPLSSAHPGLQPQLSA----KRRVIALNKKDLANPNILNKWVRHFDSCK 101
SD++I++ D+R PL + ++ L K ++ LNK DL +W++
Sbjct: 199 SDVIIQLLDARNPLGTRCKHVEEYLKKEKPHKHMILLLNKCDLIPTWCTREWIKQLS--- 255
Query: 102 QDYIAINAHS-------RSSVQKLLELVELKLKEVISREPTLLVMVVGVPNVGKSALINS 154
++Y + H+ + S+ +LL + ++ S + V +G PN GKS++IN+
Sbjct: 256 KEYPTLAFHASINNPFGKGSLIQLLR----QFSKLHSNRRQISVGFIGYPNTGKSSVINT 311
Query: 155 IHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIYVLDTPGVLVPSIPDIETG 214
+ K P+PG T+ ++ + I+++D PG++ P+ D ET
Sbjct: 312 LRS-----------KKVCNTAPIPGETKVWQYVRMTSK--IFMIDCPGIVPPNSNDSET- 357
Query: 215 LKLALSGSIKDSVVGEERIAQYLLAVLNTRGTPLHWRHLNNRTEVSQSETE 265
++ + G+++ V QY+ A+LN T +HL ++S E +
Sbjct: 358 -EIIIKGALRIEKVSNPE--QYIHAILNLCET----KHLERTYQISGWEND 401
>sp|Q58859|Y1464_METJA Uncharacterized GTP-binding protein MJ1464 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1464 PE=3 SV=1
Length = 373
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 25/181 (13%)
Query: 46 SDLVIEVRDSRIPLSSAHPGLQPQLSAKRR--VIALNKKDLANPNILNKWVRHFDSCKQD 103
D+++ V D+R P + + L+ ++ AK + + LNK DL +IL KW F ++
Sbjct: 24 CDVILLVLDARDPEMTRNRELEKKIKAKGKKLIYVLNKADLVPKDILEKWKEVFG---EN 80
Query: 104 YIAINAHSRSSVQKLLELVELKLKEVISREPTLLVMVVGVPNVGKSALINSIHQIALSRF 163
+ ++A R + L E+++ LKE+ +E V +VG PNVGKS++IN++
Sbjct: 81 TVFVSAKRRLGTKILREMIKQSLKEMGKKEGK--VGIVGYPNVGKSSIINALTG------ 132
Query: 164 PVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIYVLDTPGVLVPSIPDIETGLKLALSGSI 223
++A G + G+T+ ++ +I ++DTPGVL D L +SG++
Sbjct: 133 -----KRKALTGSVAGLTKGEQWVRLTK--NIKLMDTPGVLEMRDED-----DLVISGAL 180
Query: 224 K 224
+
Sbjct: 181 R 181
>sp|Q6TGJ8|NOG2_CRYGA Nucleolar GTP-binding protein 2 OS=Cryptococcus gattii GN=NOG2 PE=3
SV=1
Length = 731
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 33/189 (17%)
Query: 43 LKISDLVIEVRDSRIPLSS-AHP---GLQPQLSAKRRVIALNKKDL------------AN 86
L SD+VI V D+R PL + P L+ + + K V LNK DL A
Sbjct: 230 LDSSDVVIHVLDARDPLGTRCKPVVEYLRKEKAHKHLVYVLNKVDLVPTWVTSGPYAYAY 289
Query: 87 PNILNKWVRHFDSCKQDYIAINAHSRSSVQK--LLELVELKLKEVISREPTLLVMVVGVP 144
N +WV+H S IA +A +S K L++L+ + + S + + V +G P
Sbjct: 290 ANGPARWVKHL-SLSAPTIAFHASINNSFGKGSLIQLLR-QFSVLHSDKKQISVGFIGYP 347
Query: 145 NVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIYVLDTPGVL 204
N GKS++IN++ +K K TV P+PG T+ + R IY++D PG++
Sbjct: 348 NTGKSSIINTL-----------KKKKVCTVAPIPGETKVWQYITLMRR--IYLIDCPGIV 394
Query: 205 VPSIPDIET 213
S D +T
Sbjct: 395 PVSAKDSDT 403
>sp|Q8MT06|GNL3_DROME Guanine nucleotide-binding protein-like 3 homolog OS=Drosophila
melanogaster GN=ns1 PE=1 SV=2
Length = 581
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 42/190 (22%)
Query: 46 SDLVIEVRDSRIPLSSAHPGLQPQLSA----KRRVIALNKKDLANPNILNKWVRHFDSCK 101
+D+V+EV D+R PL + ++ + KR V+ LNK DL LN W+++F
Sbjct: 151 ADVVLEVVDARDPLGTRCNEVERAVRGAPGNKRLVLVLNKADLVPRENLNNWIKYFRRSG 210
Query: 102 QDYIAINAHSRSSVQKL--LELVELKLKEVISR----------------------EPTLL 137
A A ++ +L +L E+K ++ + + ++
Sbjct: 211 P-VTAFKASTQDQANRLGRRKLREMKTEKAMQGSVCIGAELLMSMLGNYCRNKGIKTSIR 269
Query: 138 VMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIYV 197
V VVG+PNVGKS++INS+ + + VG PGVT+ + ++ + I +
Sbjct: 270 VGVVGIPNVGKSSIINSLT-----------RGRSCMVGSTPGVTKSMQEVELDSK--IKL 316
Query: 198 LDTPGVLVPS 207
+D PG++ S
Sbjct: 317 IDCPGIVFTS 326
>sp|O14236|NOG2_SCHPO Nucleolar GTP-binding protein 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nog2 PE=1 SV=1
Length = 537
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 25/180 (13%)
Query: 46 SDLVIEVRDSRIPLSS----AHPGLQPQLSAKRRVIALNKKDLANPNILNKWVRHFDSCK 101
SD++I+V D+R P+ + L+ + S K ++ LNK DL ++ WV+
Sbjct: 217 SDVLIQVLDARDPVGTRCGTVERYLRNEASHKHMILVLNKVDLVPTSVAAAWVKIL---A 273
Query: 102 QDY--IAINAHSRSSVQK--LLELVELKLKEVISREPTLLVMVVGVPNVGKSALINSIHQ 157
++Y IA +A +S K L++++ + + S + + V ++G PN GKS++IN++
Sbjct: 274 KEYPTIAFHASINNSFGKGSLIQILR-QFASLHSDKKQISVGLIGFPNAGKSSIINTLR- 331
Query: 158 IALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIYVLDTPGVLVPSIPDIETGLKL 217
K K V P+PG T+ + R I+++D PG++ PS D + L L
Sbjct: 332 ----------KKKVCNVAPIPGETKVWQYVALMKR--IFLIDCPGIVPPSSNDSDAELLL 379
>sp|Q6PGG6|GNL3L_MOUSE Guanine nucleotide-binding protein-like 3-like protein OS=Mus
musculus GN=Gnl3l PE=1 SV=1
Length = 577
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 51/225 (22%)
Query: 25 INWFPGHMAAATRAIKHR-----LKISDLVIEVRDSRIPLSSAHPGLQPQL----SAKRR 75
+N FP ATR ++ ++ SD+++EV D+R PL ++ + K+
Sbjct: 102 LNMFPQLDDEATRKAYYKEFRKVVEYSDVILEVLDARDPLGCRCFQMEETVLRAEGNKKL 161
Query: 76 VIALNKKDLANPNILNKWVRH---------FDSCKQDYIAIN-AHSRSSVQKLLELVELK 125
V+ LNK DL I+ KW+ + F + Q + N + V + E + LK
Sbjct: 162 VLVLNKIDLVPKEIVEKWLEYLLNELPTVAFKASTQHHQVKNLTRCKVPVDQASESL-LK 220
Query: 126 LKEVISREPTLLVM----------------VVGVPNVGKSALINSIHQIALSRFPVQEKT 169
+ E + V+ VVG+PNVGKS+LINS+ +++
Sbjct: 221 SRACFGAENLMRVLGNYCRLGEVRGHIRVGVVGLPNVGKSSLINSL-----------KRS 269
Query: 170 KRATVGPLPGVTQDIAGFKIAHRPSIYVLDTPGVLVPSIPDIETG 214
+ +VG +PGVT+ + ++ I +LD PG+ VP P+ E G
Sbjct: 270 RACSVGAVPGVTKFMQ--EVYLDKFIRLLDAPGI-VPG-PNSEVG 310
>sp|Q9NVN8|GNL3L_HUMAN Guanine nucleotide-binding protein-like 3-like protein OS=Homo
sapiens GN=GNL3L PE=1 SV=1
Length = 582
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 50/224 (22%)
Query: 25 INWFPGHMAAATRAIKHR-----LKISDLVIEVRDSRIPLSSAHPGLQPQL----SAKRR 75
+N FP ATR ++ ++ SD+++EV D+R PL ++ + K+
Sbjct: 109 LNMFPQLDDEATRKAYYKEFRKVVEYSDVILEVLDARDPLGCRCFQMEEAVLRAQGNKKL 168
Query: 76 VIALNKKDLANPNILNKWVRHFDSCKQDYIAINAHSRSSVQKLLELVE---------LKL 126
V+ LNK DL ++ KW+ + + + +A A ++ V+ L LK
Sbjct: 169 VLVLNKIDLVPKEVVEKWLDYLRN-ELPTVAFKASTQHQVKNLNRCSVPVDQASESLLKS 227
Query: 127 KEVISREPTLLVM----------------VVGVPNVGKSALINSIHQIALSRFPVQEKTK 170
K E + V+ VVG+PNVGKS+LINS+ ++++
Sbjct: 228 KACFGAENLMRVLGNYCRLGEVRTHIRVGVVGLPNVGKSSLINSL-----------KRSR 276
Query: 171 RATVGPLPGVTQDIAGFKIAHRPSIYVLDTPGVLVPSIPDIETG 214
+VG +PG+T+ + ++ I +LD PG+ VP P+ E G
Sbjct: 277 ACSVGAVPGITKFMQ--EVYLDKFIRLLDAPGI-VPG-PNSEVG 316
>sp|Q99LH1|NOG2_MOUSE Nucleolar GTP-binding protein 2 OS=Mus musculus GN=Gnl2 PE=2 SV=2
Length = 728
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 36/185 (19%)
Query: 46 SDLVIEVRDSRIPLSSAHPGLQPQLSA----KRRVIALNKKDLANPNILNKWVRHFDSCK 101
SD+V++V D+R P+ + P ++ L K + LNK DL +WV
Sbjct: 217 SDVVVQVLDARDPMGTRSPHIEAYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLS--- 273
Query: 102 QDYIAINAHSR--------SSVQKLLELVELKL-KEVISREPTLLVMVVGVPNVGKSALI 152
QDY + H+ + +Q L + +L K+ IS V +G PNVGKS++I
Sbjct: 274 QDYPTLAFHASLTNPFGKGAFIQLLRQFGKLHTDKKQIS------VGFIGYPNVGKSSVI 327
Query: 153 NSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIYVLDTPGVLVPSIPDIE 212
N++ K V P+ G T+ + R I+++D PGV+ PS D E
Sbjct: 328 NTLRS-----------KKVCNVAPIAGETKVWQYITLMRR--IFLIDCPGVVYPS-EDSE 373
Query: 213 TGLKL 217
T + L
Sbjct: 374 TDIVL 378
>sp|Q13823|NOG2_HUMAN Nucleolar GTP-binding protein 2 OS=Homo sapiens GN=GNL2 PE=1 SV=1
Length = 731
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 36/185 (19%)
Query: 46 SDLVIEVRDSRIPLSSAHPGLQPQLSA----KRRVIALNKKDLANPNILNKWVRHFDSCK 101
SD+V++V D+R P+ + P ++ L K + LNK DL +WV
Sbjct: 217 SDVVVQVLDARDPMGTRSPHIETYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLS--- 273
Query: 102 QDYIAINAHSR--------SSVQKLLELVELKL-KEVISREPTLLVMVVGVPNVGKSALI 152
QDY + H+ + +Q L + +L K+ IS V +G PNVGKS++I
Sbjct: 274 QDYPTLAFHASLTNPFGKGAFIQLLRQFGKLHTDKKQIS------VGFIGYPNVGKSSVI 327
Query: 153 NSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIYVLDTPGVLVPSIPDIE 212
N++ K V P+ G T+ + R I+++D PGV+ PS D E
Sbjct: 328 NTLRS-----------KKVCNVAPIAGETKVWQYITLMRR--IFLIDCPGVVYPS-EDSE 373
Query: 213 TGLKL 217
T + L
Sbjct: 374 TDIVL 378
>sp|Q6DRP2|GNL3_DANRE Guanine nucleotide-binding protein-like 3 OS=Danio rerio GN=gnl3
PE=2 SV=1
Length = 561
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 52/197 (26%)
Query: 43 LKISDLVIEVRDSRIPLSSAHPGLQPQL----SAKRRVIALNKKDLANPNILNKWVRHFD 98
++ SD+++EV D+R PL P L+ + K+ + LNK DL + L KW+ +
Sbjct: 140 IEASDVIVEVLDARDPLGCRCPQLEEMVLKHEGKKKLLFILNKIDLVPKDNLEKWLHFLE 199
Query: 99 S-C------------------KQDYIAINA---HSRSS--------VQKLLELVELKLKE 128
+ C K+ NA HSR++ +Q L +L K E
Sbjct: 200 AECPTFLFKSSMQLKDRTVQQKRQQRGTNAVLDHSRAASCFGKDFLLQTLNDLANKKEGE 259
Query: 129 VISREPTLLVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFK 188
+ L V VVG PNVGKS++INS+ ++ VQ G+T+ +
Sbjct: 260 TM-----LKVGVVGFPNVGKSSIINSLKEMRACNAGVQR-----------GLTRCMQEVH 303
Query: 189 IAHRPSIYVLDTPGVLV 205
I + + ++D+PG+L
Sbjct: 304 ITKK--VKMIDSPGILA 318
>sp|A8F7S2|DER_THELT GTPase Der OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385
/ TMO) GN=der PE=3 SV=1
Length = 435
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 28/216 (12%)
Query: 2 GLKRIIKKGLGL-GEMGF----TKGGGNINWFPGHMAAATRAIKHRLKISDLVIEVRDSR 56
G+ R I KGL + E F T G P +A +A + + +DL++ V D R
Sbjct: 34 GVTRDIIKGLVVYNETSFLLYDTCGVFESTRDPVLLAMRDKAFEA-FRKADLILFVVDGR 92
Query: 57 IPLSSAHPGLQPQLS--AKRRVIALNKKDLANPNILNKWVRHFDSCK-QDYIAINAHSRS 113
++S + QL AK+ ++ +NK + N +++ K + +YI ++A +
Sbjct: 93 SGITSEDEYVAQQLRKIAKKVLMVINKSE--NMSVVEKNLPDIMKLGFAEYIPVSAQHGN 150
Query: 114 SVQKLLELVELKLKE-----VISREPTLLVMVVGVPNVGKSALINSIHQIALSRFPVQEK 168
++ +LL+ + L+E ++ +E + + +VG PNVGKS+L N++ +
Sbjct: 151 NIDELLDKITNLLRESGEKSMLFKESSPKIAIVGKPNVGKSSLFNALLNM---------- 200
Query: 169 TKRATVGPLPGVTQDIAGFKIAHRPSIYVL-DTPGV 203
RATV P+PG T+D I Y+L DT G+
Sbjct: 201 -DRATVTPVPGTTRDPVDEMIEINGKKYILVDTAGM 235
>sp|Q6MB45|DER_PARUW GTPase Der OS=Protochlamydia amoebophila (strain UWE25) GN=der PE=3
SV=1
Length = 487
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 28/172 (16%)
Query: 46 SDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVI---------ALNKKD-LANPNILNKWVR 95
+++ IE D+ + + AH GL RV+ A+NK D L+ ++++++
Sbjct: 78 AEIAIEEADTIVQVVDAHVGLTELDKEVARVLLRTKKPVCLAVNKIDNLSQTSLMHQF-- 135
Query: 96 HFDSCKQDYIAINAHSRSSVQKLLELVELKL-KEVISRE--PTLLVMVVGVPNVGKSALI 152
H KQ I ++A + +LLE K+ +E+ S+E ++ V +VG NVGKS+L+
Sbjct: 136 HSLGIKQ-MIPVSAAQGWQIAELLETAFEKISREIESQETFSSIKVAIVGRANVGKSSLV 194
Query: 153 NSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIYVL-DTPGV 203
N + R V P+PG T+D H+ Y L DT G+
Sbjct: 195 NYLLD-----------EDRCIVSPIPGTTRDSVDISFTHKDECYTLIDTAGI 235
>sp|B2A4M9|DER_NATTJ GTPase Der OS=Natranaerobius thermophilus (strain ATCC BAA-1301 /
DSM 18059 / JW/NM-WN-LF) GN=der PE=3 SV=1
Length = 440
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 27/208 (12%)
Query: 46 SDLVIEVRDSRIPLSSAHPGLQPQLSAKRR--VIALNKKDLANPNILNKWVRHFDSCKQD 103
+D+++ V D R ++ A + L ++ ++A+NK + N + + +
Sbjct: 84 ADVIVFVTDGRDGITPADEEVAATLRKTKKPVLVAVNK---SEGNYDQYAMEFYQLGFEQ 140
Query: 104 YIAINA-HSRSSVQKLLELVEL----KLKEVISREPTLLVMVVGVPNVGKSALINSIHQI 158
I+I+A H ++ Q L E+VEL + +E+ E +++ V+G PNVGKS+LIN I
Sbjct: 141 VISISALHGTNTGQLLDEIVELLPEQEYEELNYHEDDIMLSVIGRPNVGKSSLINKILN- 199
Query: 159 ALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIYV-LDTPGVLVPSIPDIETGLKL 217
+R V +PG T+D I YV +DT G+ S D E K
Sbjct: 200 ----------KERLIVSNMPGTTRDAIDTVIEREDQKYVFIDTAGLRKKSKID-ERLEKY 248
Query: 218 ALSGSIKDSVVGEERIAQYLLAVLNTRG 245
++ SIK G ER LL + T+G
Sbjct: 249 SVIRSIK----GMERSNIALLLIDVTKG 272
>sp|Q10190|LSG1_SCHPO Large subunit GTPase 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=lsg1 PE=3 SV=1
Length = 616
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 95/246 (38%), Gaps = 61/246 (24%)
Query: 46 SDLVIEVRDSRIPLSSAHPGLQPQLS----AKRRVIALNKKDLANPNILNKWVRHFDSCK 101
SD+V+++ D+R PL L+ + +K+ + +NK D+ N W +F+
Sbjct: 171 SDVVVQIVDARNPLFFRSAHLEQYVKEVGPSKKNFLLVNKADMLTEEQRNYWSSYFNENN 230
Query: 102 QDYIAINAH------------------------------------SRSSVQKLLELVELK 125
++ +A SR + K+LE + K
Sbjct: 231 IPFLFFSARMAAEANERGEDLETYESTSSNEIPESLQADENDVHSSRIATLKVLEGIFEK 290
Query: 126 LKEVISREPTLLVM-VVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDI 184
+ T + +VG PNVGKS+ IN++ +K+ +V PG T+
Sbjct: 291 FASTLPDGKTKMTFGLVGYPNVGKSSTINAL-----------VGSKKVSVSSTPGKTKHF 339
Query: 185 AGFKIAHRPSIYVLDTPGVLVPSIPDIETGLKL-------ALSGSIKDSVVGEERIAQYL 237
++ + S+ LD PG++ PS + L L L S + ERI + +
Sbjct: 340 QTINLSEKVSL--LDCPGLVFPSFATTQADLVLDGVLPIDQLREYTGPSALMAERIPKEV 397
Query: 238 LAVLNT 243
L L T
Sbjct: 398 LETLYT 403
>sp|Q3AAU6|DER_CARHZ GTPase Der OS=Carboxydothermus hydrogenoformans (strain Z-2901 /
DSM 6008) GN=der PE=3 SV=1
Length = 440
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 39 IKHRLKISDLVIEVRDSRIPLSSAHPGLQPQL--SAKRRVIALNKKDLANPNILNKWVRH 96
I+ + +DL++ V DSR ++S + L S K ++ NK D + LN
Sbjct: 76 IEKAINEADLILFVCDSREGITSTDEAVAKNLRKSDKPVILVANKVD----DYLNPPANF 131
Query: 97 FDSCK---QDYIAINAHSRSSVQKLLELVELKL---KEVISREPTLLVMVVGVPNVGKSA 150
+D + + ++A + ++V LL+LV KL ++ P + + VVG PNVGKS+
Sbjct: 132 YDLYRLGLGEPFPVSAANGTNVGDLLDLVISKLNFPEDYEDENPVVKIAVVGRPNVGKSS 191
Query: 151 LINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIAGFKIAHRPSIYVL-DTPGV 203
L+N++ +R V +PG T+D + ++ Y+L DT G+
Sbjct: 192 LVNALL-----------GEERVVVSDIPGTTRDAIDTPMWYQGKPYLLIDTAGM 234
>sp|Q9H089|LSG1_HUMAN Large subunit GTPase 1 homolog OS=Homo sapiens GN=LSG1 PE=1 SV=2
Length = 658
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 17/109 (15%)
Query: 114 SVQKLLELV-ELKLKEVISREPTLLVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRA 172
S Q+LLEL EL + ++ L V +VG PNVGKS+ IN+I K+
Sbjct: 365 SKQELLELFKELHTGRKV-KDGQLTVGLVGYPNVGKSSTINTIM-----------GNKKV 412
Query: 173 TVGPLPGVTQDIAGFKIAHRPSIYVLDTPGVLVPSIPDIETGLKLALSG 221
+V PG T+ + P + + D PG+++PS + T ++ SG
Sbjct: 413 SVSATPGHTKHFQTLYV--EPGLCLCDCPGLVMPSF--VSTKAEMTCSG 457
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,667,631
Number of Sequences: 539616
Number of extensions: 5617117
Number of successful extensions: 22771
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 988
Number of HSP's that attempted gapping in prelim test: 21954
Number of HSP's gapped (non-prelim): 1647
length of query: 375
length of database: 191,569,459
effective HSP length: 119
effective length of query: 256
effective length of database: 127,355,155
effective search space: 32602919680
effective search space used: 32602919680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)