Query 017191
Match_columns 375
No_of_seqs 167 out of 1802
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 06:24:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017191.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017191hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 7.7E-39 1.7E-43 300.6 31.2 316 4-327 9-335 (358)
2 PRK11272 putative DMT superfam 100.0 3.5E-33 7.7E-38 258.0 30.4 280 8-323 8-288 (292)
3 PRK11453 O-acetylserine/cystei 100.0 4.8E-32 1E-36 251.3 28.8 280 9-323 5-290 (299)
4 PRK15430 putative chlorampheni 100.0 4.3E-32 9.3E-37 251.1 25.6 282 1-320 1-285 (296)
5 PRK11689 aromatic amino acid e 100.0 1.3E-31 2.8E-36 247.8 26.2 285 6-323 2-290 (295)
6 PRK10532 threonine and homoser 100.0 6.5E-31 1.4E-35 242.9 29.6 278 6-326 10-287 (293)
7 TIGR00950 2A78 Carboxylate/Ami 100.0 8.2E-31 1.8E-35 238.5 27.5 259 20-316 1-260 (260)
8 TIGR00817 tpt Tpt phosphate/ph 100.0 6.1E-30 1.3E-34 237.7 26.3 286 11-327 5-300 (302)
9 TIGR03340 phn_DUF6 phosphonate 100.0 1.1E-27 2.3E-32 220.3 23.6 275 10-317 3-280 (281)
10 PF06027 DUF914: Eukaryotic pr 100.0 1.1E-26 2.5E-31 213.8 28.0 298 7-326 12-311 (334)
11 PTZ00343 triose or hexose phos 100.0 1.2E-26 2.6E-31 219.0 28.6 284 6-321 47-349 (350)
12 TIGR00688 rarD rarD protein. T 99.9 1.5E-25 3.3E-30 203.3 26.4 249 8-295 2-255 (256)
13 COG0697 RhaT Permeases of the 99.9 8.7E-24 1.9E-28 195.0 29.9 284 4-321 3-288 (292)
14 COG5006 rhtA Threonine/homoser 99.9 8.2E-23 1.8E-27 174.5 24.8 275 9-325 13-287 (292)
15 COG2962 RarD Predicted permeas 99.9 1.6E-22 3.5E-27 177.5 25.0 281 4-322 3-285 (293)
16 TIGR00776 RhaT RhaT L-rhamnose 99.9 2.7E-21 5.8E-26 178.0 24.0 275 9-321 2-289 (290)
17 KOG4510 Permease of the drug/m 99.9 1.2E-24 2.7E-29 186.8 1.5 294 6-325 36-330 (346)
18 PF08449 UAA: UAA transporter 99.8 2.1E-18 4.5E-23 160.2 25.8 279 24-325 16-302 (303)
19 KOG2765 Predicted membrane pro 99.8 2E-19 4.3E-24 162.2 17.3 302 5-326 11-396 (416)
20 KOG1441 Glucose-6-phosphate/ph 99.8 4.9E-18 1.1E-22 154.7 10.7 285 13-327 22-314 (316)
21 KOG2766 Predicted membrane pro 99.7 6.9E-18 1.5E-22 144.5 4.6 266 22-319 32-298 (336)
22 COG2510 Predicted membrane pro 99.7 2.2E-16 4.7E-21 121.3 10.3 135 9-151 4-138 (140)
23 KOG2234 Predicted UDP-galactos 99.6 5.8E-13 1.3E-17 120.8 27.1 299 8-324 15-326 (345)
24 KOG1580 UDP-galactose transpor 99.6 9.2E-15 2E-19 123.9 12.4 255 38-318 54-311 (337)
25 PF04142 Nuc_sug_transp: Nucle 99.6 1E-13 2.3E-18 123.7 19.9 232 68-311 12-244 (244)
26 COG2510 Predicted membrane pro 99.6 4.2E-14 9E-19 108.8 12.0 136 182-320 4-139 (140)
27 KOG1444 Nucleotide-sugar trans 99.6 7.9E-13 1.7E-17 118.3 21.8 289 7-326 11-306 (314)
28 PF00892 EamA: EamA-like trans 99.5 4.3E-14 9.3E-19 113.4 9.6 125 18-151 1-125 (126)
29 KOG1581 UDP-galactose transpor 99.5 1.1E-12 2.4E-17 115.8 16.7 265 36-324 50-317 (327)
30 KOG1443 Predicted integral mem 99.5 3.2E-12 7E-17 112.9 19.3 253 37-318 45-313 (349)
31 PF00892 EamA: EamA-like trans 99.5 2E-13 4.3E-18 109.5 9.2 125 191-319 1-125 (126)
32 PF06800 Sugar_transport: Suga 99.3 9.6E-10 2.1E-14 98.0 23.2 251 36-317 11-268 (269)
33 TIGR00950 2A78 Carboxylate/Ami 99.3 6.6E-11 1.4E-15 107.5 15.8 134 5-148 125-260 (260)
34 KOG3912 Predicted integral mem 99.3 2.7E-10 5.9E-15 99.5 17.1 280 21-319 16-333 (372)
35 PF13536 EmrE: Multidrug resis 99.2 4.1E-11 8.9E-16 94.4 8.6 104 42-152 2-106 (113)
36 COG5070 VRG4 Nucleotide-sugar 99.2 1.7E-10 3.8E-15 97.4 9.9 290 7-326 8-302 (309)
37 PRK13499 rhamnose-proton sympo 99.1 3.9E-08 8.5E-13 91.3 25.2 300 5-321 4-342 (345)
38 PRK10532 threonine and homoser 99.1 1.9E-09 4.2E-14 99.7 16.2 136 6-152 146-281 (293)
39 PRK11272 putative DMT superfam 99.1 2.2E-09 4.7E-14 99.3 16.3 138 6-152 148-285 (292)
40 KOG4314 Predicted carbohydrate 99.1 3.5E-10 7.6E-15 93.9 9.4 218 77-323 57-279 (290)
41 PF03151 TPT: Triose-phosphate 99.1 1.2E-09 2.5E-14 91.0 12.6 138 182-320 1-153 (153)
42 PRK15430 putative chlorampheni 99.1 9.7E-10 2.1E-14 101.8 13.4 139 178-320 5-145 (296)
43 TIGR03340 phn_DUF6 phosphonate 99.1 2.3E-09 4.9E-14 98.6 13.7 134 183-321 3-136 (281)
44 KOG1442 GDP-fucose transporter 99.1 1.5E-10 3.3E-15 100.8 5.1 274 25-325 45-332 (347)
45 TIGR00688 rarD rarD protein. T 99.0 2.5E-09 5.5E-14 97.0 12.5 137 181-320 2-142 (256)
46 KOG1582 UDP-galactose transpor 99.0 9.4E-09 2E-13 89.6 15.1 274 23-326 58-338 (367)
47 PRK11689 aromatic amino acid e 99.0 5.9E-09 1.3E-13 96.6 14.9 133 7-152 155-287 (295)
48 PLN00411 nodulin MtN21 family 99.0 9.1E-09 2E-13 97.3 16.2 137 7-152 188-328 (358)
49 PF05653 Mg_trans_NIPA: Magnes 99.0 1.9E-08 4E-13 92.7 15.6 278 5-324 4-296 (300)
50 PRK02971 4-amino-4-deoxy-L-ara 98.9 1.5E-08 3.2E-13 81.2 11.5 123 181-324 2-126 (129)
51 PRK11453 O-acetylserine/cystei 98.9 7.3E-08 1.6E-12 89.5 16.4 140 7-152 142-287 (299)
52 TIGR00803 nst UDP-galactose tr 98.9 2.8E-08 6.1E-13 88.1 11.9 203 101-318 5-222 (222)
53 TIGR00817 tpt Tpt phosphate/ph 98.8 4.6E-08 9.9E-13 91.0 12.1 141 6-152 143-293 (302)
54 KOG1583 UDP-N-acetylglucosamin 98.8 1.9E-08 4.2E-13 88.0 8.2 237 66-320 60-314 (330)
55 PF13536 EmrE: Multidrug resis 98.8 2.4E-08 5.1E-13 78.6 8.0 108 216-324 3-110 (113)
56 COG4975 GlcU Putative glucose 98.8 1.4E-09 2.9E-14 93.6 0.7 278 9-320 3-285 (288)
57 PF03151 TPT: Triose-phosphate 98.8 2.1E-07 4.6E-12 77.3 13.9 135 9-150 1-151 (153)
58 PTZ00343 triose or hexose phos 98.6 1.2E-06 2.5E-11 83.1 16.2 140 6-151 192-347 (350)
59 COG0697 RhaT Permeases of the 98.6 2.6E-06 5.7E-11 78.2 15.7 134 7-152 153-287 (292)
60 TIGR00776 RhaT RhaT L-rhamnose 98.5 1.9E-06 4.2E-11 79.5 14.4 129 7-151 151-287 (290)
61 PRK15051 4-amino-4-deoxy-L-ara 98.5 2E-06 4.4E-11 67.1 11.9 69 77-151 40-108 (111)
62 PRK15051 4-amino-4-deoxy-L-ara 98.5 4.4E-07 9.5E-12 70.9 8.0 67 253-319 42-108 (111)
63 PRK02971 4-amino-4-deoxy-L-ara 98.5 3.7E-06 8E-11 67.3 12.3 118 8-151 2-121 (129)
64 COG2962 RarD Predicted permeas 98.4 1.9E-06 4.1E-11 76.7 10.6 139 180-321 6-145 (293)
65 PF06027 DUF914: Eukaryotic pr 98.3 1.5E-05 3.2E-10 74.2 14.0 142 4-153 164-306 (334)
66 COG5006 rhtA Threonine/homoser 98.3 1.9E-05 4.1E-10 68.7 12.2 134 5-148 145-278 (292)
67 KOG2922 Uncharacterized conser 98.2 3.2E-06 7E-11 76.1 6.8 277 5-323 18-309 (335)
68 PRK10452 multidrug efflux syst 98.1 7.6E-06 1.7E-10 64.3 6.3 70 254-323 36-106 (120)
69 PF04657 DUF606: Protein of un 97.9 0.00034 7.4E-09 56.8 12.4 132 182-317 2-138 (138)
70 PF08449 UAA: UAA transporter 97.8 0.00062 1.3E-08 63.3 14.4 138 8-152 154-297 (303)
71 PRK09541 emrE multidrug efflux 97.8 0.00018 4E-09 55.8 9.0 69 254-322 36-105 (110)
72 PF05653 Mg_trans_NIPA: Magnes 97.8 0.00015 3.3E-09 66.9 9.7 121 177-321 3-123 (300)
73 COG3238 Uncharacterized protei 97.7 0.001 2.2E-08 54.1 12.6 139 180-321 4-147 (150)
74 PF06800 Sugar_transport: Suga 97.7 0.00062 1.3E-08 61.1 12.2 116 5-129 135-250 (269)
75 PF06379 RhaT: L-rhamnose-prot 97.7 0.018 3.9E-07 53.1 21.2 302 6-321 5-341 (344)
76 PRK10650 multidrug efflux syst 97.7 0.00078 1.7E-08 52.1 10.5 65 81-151 42-107 (109)
77 COG2076 EmrE Membrane transpor 97.6 0.00017 3.7E-09 54.8 6.1 66 256-321 38-104 (106)
78 PRK10650 multidrug efflux syst 97.6 0.0007 1.5E-08 52.3 9.5 64 256-319 43-107 (109)
79 PRK11431 multidrug efflux syst 97.5 0.00031 6.8E-09 53.9 6.5 66 255-320 36-102 (105)
80 PF10639 UPF0546: Uncharacteri 97.5 0.00037 8E-09 54.0 6.6 110 14-150 2-112 (113)
81 KOG4510 Permease of the drug/m 97.4 9.5E-05 2.1E-09 65.0 3.1 137 6-152 189-325 (346)
82 PRK10452 multidrug efflux syst 97.4 0.0011 2.4E-08 52.2 8.7 68 79-152 35-103 (120)
83 PRK09541 emrE multidrug efflux 97.4 0.0021 4.6E-08 49.9 9.4 67 80-152 36-103 (110)
84 KOG2765 Predicted membrane pro 97.3 0.0013 2.9E-08 60.7 9.3 141 5-152 244-390 (416)
85 PF00893 Multi_Drug_Res: Small 97.3 0.0014 3.1E-08 49.4 7.8 56 256-311 37-93 (93)
86 PF04657 DUF606: Protein of un 97.3 0.0062 1.3E-07 49.5 11.9 130 10-149 3-138 (138)
87 KOG1441 Glucose-6-phosphate/ph 97.3 0.00088 1.9E-08 61.8 7.6 139 6-152 161-307 (316)
88 COG2076 EmrE Membrane transpor 97.3 0.0023 5E-08 48.7 8.5 67 80-152 36-103 (106)
89 PRK11431 multidrug efflux syst 97.3 0.0033 7.1E-08 48.3 9.5 65 81-151 36-101 (105)
90 PF04142 Nuc_sug_transp: Nucle 97.3 0.00072 1.6E-08 60.6 6.6 79 246-325 16-94 (244)
91 PRK13499 rhamnose-proton sympo 97.1 0.0023 5.1E-08 59.8 8.7 136 179-320 5-153 (345)
92 PF07857 DUF1632: CEO family ( 97.0 0.018 3.9E-07 51.5 12.8 186 9-206 1-208 (254)
93 PF00893 Multi_Drug_Res: Small 96.8 0.013 2.9E-07 44.0 8.8 57 80-142 35-92 (93)
94 PF10639 UPF0546: Uncharacteri 96.6 0.0083 1.8E-07 46.5 6.7 109 188-318 3-112 (113)
95 PF07857 DUF1632: CEO family ( 96.6 0.0068 1.5E-07 54.2 7.0 133 182-326 1-140 (254)
96 KOG1581 UDP-galactose transpor 96.5 0.031 6.7E-07 50.5 10.7 141 5-152 169-313 (327)
97 COG4975 GlcU Putative glucose 96.2 0.0043 9.4E-08 54.2 3.1 133 182-324 3-140 (288)
98 TIGR00803 nst UDP-galactose tr 96.0 0.035 7.7E-07 49.0 8.4 65 78-149 157-221 (222)
99 KOG2234 Predicted UDP-galactos 95.9 0.17 3.7E-06 46.9 12.5 142 181-323 15-167 (345)
100 COG3238 Uncharacterized protei 95.7 0.35 7.6E-06 39.5 12.0 138 6-151 3-145 (150)
101 KOG1444 Nucleotide-sugar trans 95.6 0.14 3E-06 46.8 10.5 139 7-152 156-300 (314)
102 KOG2922 Uncharacterized conser 95.6 0.0065 1.4E-07 55.2 2.0 126 177-326 17-142 (335)
103 KOG1580 UDP-galactose transpor 95.6 0.08 1.7E-06 46.1 8.3 140 7-153 171-314 (337)
104 KOG4314 Predicted carbohydrate 95.4 0.015 3.3E-07 49.0 3.4 66 260-325 65-130 (290)
105 COG5070 VRG4 Nucleotide-sugar 95.3 0.11 2.4E-06 44.8 8.2 137 9-152 156-296 (309)
106 PF06379 RhaT: L-rhamnose-prot 94.6 0.19 4.1E-06 46.6 8.3 140 178-321 4-154 (344)
107 PRK02237 hypothetical protein; 93.1 1.1 2.4E-05 34.1 8.6 53 94-152 51-105 (109)
108 KOG1443 Predicted integral mem 92.4 3.6 7.9E-05 37.6 12.4 138 6-150 162-313 (349)
109 PF02694 UPF0060: Uncharacteri 92.0 0.96 2.1E-05 34.4 7.0 53 94-152 50-103 (107)
110 KOG4831 Unnamed protein [Funct 91.8 2.5 5.4E-05 32.0 8.9 113 11-151 6-124 (125)
111 KOG2766 Predicted membrane pro 91.6 0.082 1.8E-06 46.7 1.1 109 207-323 45-153 (336)
112 PRK02237 hypothetical protein; 91.4 0.93 2E-05 34.5 6.4 48 276-323 61-108 (109)
113 PF02694 UPF0060: Uncharacteri 91.2 0.95 2.1E-05 34.4 6.3 48 276-323 59-106 (107)
114 PF07168 Ureide_permease: Urei 90.7 0.11 2.5E-06 47.0 1.2 134 187-323 2-149 (336)
115 COG1742 Uncharacterized conser 89.7 1.8 3.9E-05 32.7 6.6 47 100-152 57-104 (109)
116 KOG1582 UDP-galactose transpor 89.2 2.9 6.3E-05 37.5 8.7 140 6-152 188-332 (367)
117 KOG3912 Predicted integral mem 88.2 0.71 1.5E-05 41.5 4.3 65 257-321 95-159 (372)
118 PRK12650 putative monovalent c 83.9 70 0.0015 34.8 21.8 37 71-109 620-656 (962)
119 KOG1442 GDP-fucose transporter 83.8 2.3 4.9E-05 38.3 5.1 144 6-156 183-331 (347)
120 PRK06638 NADH:ubiquinone oxido 83.0 28 0.0006 30.1 11.6 33 289-321 133-167 (198)
121 COG1742 Uncharacterized conser 82.2 5.4 0.00012 30.2 5.8 48 276-323 60-107 (109)
122 PF15102 TMEM154: TMEM154 prot 80.9 1.3 2.8E-05 35.8 2.3 24 305-328 66-89 (146)
123 PF04342 DUF486: Protein of un 78.6 2.3 5E-05 32.2 2.9 31 289-319 77-107 (108)
124 PF03547 Mem_trans: Membrane t 74.6 36 0.00077 32.5 10.8 8 257-264 72-79 (385)
125 KOG4831 Unnamed protein [Funct 74.6 6.7 0.00015 29.8 4.4 60 260-319 64-124 (125)
126 KOG1583 UDP-N-acetylglucosamin 71.6 41 0.00089 30.6 9.3 135 7-152 163-314 (330)
127 TIGR02865 spore_II_E stage II 70.4 52 0.0011 34.9 11.5 45 100-150 10-54 (764)
128 COG3169 Uncharacterized protei 70.4 8 0.00017 28.9 3.9 32 289-320 84-115 (116)
129 PRK13108 prolipoprotein diacyl 69.0 1.2E+02 0.0027 29.9 16.2 50 277-326 226-280 (460)
130 PF06570 DUF1129: Protein of u 63.4 1E+02 0.0022 26.7 11.4 32 70-102 143-174 (206)
131 PF07168 Ureide_permease: Urei 57.3 4.9 0.00011 36.7 1.0 113 13-128 1-126 (336)
132 PF03348 Serinc: Serine incorp 50.6 2.5E+02 0.0055 27.5 19.8 59 253-324 249-307 (429)
133 PF05297 Herpes_LMP1: Herpesvi 50.3 5.3 0.00011 36.0 0.0 51 95-151 44-96 (381)
134 PF11044 TMEMspv1-c74-12: Plec 47.3 9.9 0.00021 23.8 0.9 17 300-316 2-18 (49)
135 PF06570 DUF1129: Protein of u 45.2 2E+02 0.0044 24.8 9.6 24 180-203 178-201 (206)
136 PF04342 DUF486: Protein of un 43.5 1.5E+02 0.0032 22.7 8.0 31 113-149 75-105 (108)
137 COG3086 RseC Positive regulato 43.2 13 0.00028 30.1 1.2 44 268-312 68-111 (150)
138 PF15345 TMEM51: Transmembrane 41.6 9.8 0.00021 33.3 0.3 23 306-328 67-89 (233)
139 PF15099 PIRT: Phosphoinositid 40.7 13 0.00028 29.2 0.8 15 250-264 59-73 (129)
140 PF05977 MFS_3: Transmembrane 40.6 4E+02 0.0086 26.9 19.3 15 281-295 353-367 (524)
141 PF06084 Cytomega_TRL10: Cytom 40.1 58 0.0013 25.0 4.2 25 301-325 61-85 (150)
142 PF06123 CreD: Inner membrane 38.3 4E+02 0.0086 26.2 12.1 27 181-207 351-377 (430)
143 PF03595 SLAC1: Voltage-depend 38.1 3.3E+02 0.0071 25.2 10.2 78 136-230 6-91 (330)
144 PF09656 PGPGW: Putative trans 35.6 1.3E+02 0.0029 19.9 5.0 45 136-206 5-49 (53)
145 MTH00057 ND6 NADH dehydrogenas 34.4 2.9E+02 0.0063 23.5 11.5 33 289-321 132-166 (186)
146 TIGR00905 2A0302 transporter, 34.3 4.6E+02 0.01 25.8 17.1 43 281-324 395-438 (473)
147 PF08693 SKG6: Transmembrane a 33.8 35 0.00076 21.1 1.8 19 306-324 21-39 (40)
148 PRK05122 major facilitator sup 33.8 4.1E+02 0.0088 25.0 11.7 32 288-319 355-386 (399)
149 TIGR01299 synapt_SV2 synaptic 32.9 6.2E+02 0.013 26.8 12.1 18 108-125 340-357 (742)
150 PF05297 Herpes_LMP1: Herpesvi 32.4 14 0.0003 33.4 -0.2 25 258-282 118-142 (381)
151 PHA03049 IMV membrane protein; 31.2 29 0.00062 23.9 1.2 19 304-322 6-24 (68)
152 COG3086 RseC Positive regulato 29.8 85 0.0018 25.5 3.8 27 95-121 69-95 (150)
153 PF11714 Inhibitor_I53: Thromb 28.8 73 0.0016 22.1 2.8 18 310-327 10-27 (78)
154 PF10754 DUF2569: Protein of u 28.7 3.2E+02 0.007 22.2 7.6 29 178-206 118-146 (149)
155 TIGR01167 LPXTG_anchor LPXTG-m 27.6 56 0.0012 18.8 2.0 17 301-317 11-27 (34)
156 PF04246 RseC_MucC: Positive r 27.6 28 0.0006 27.9 0.8 28 272-300 65-92 (135)
157 PF11381 DUF3185: Protein of u 26.6 32 0.00068 23.3 0.8 21 304-324 1-21 (59)
158 PLN00028 nitrate transmembrane 26.1 4.8E+02 0.01 25.6 9.5 15 305-319 417-431 (476)
159 PRK10862 SoxR reducing system 25.7 98 0.0021 25.5 3.7 26 96-121 70-95 (154)
160 KOG4455 Uncharacterized conser 25.5 3.1E+02 0.0068 21.0 6.1 24 71-95 83-106 (110)
161 PRK11715 inner membrane protei 24.7 6.8E+02 0.015 24.6 11.6 25 182-206 358-382 (436)
162 PF01102 Glycophorin_A: Glycop 23.5 33 0.00072 27.1 0.5 14 307-320 76-89 (122)
163 PF15048 OSTbeta: Organic solu 23.5 25 0.00055 27.6 -0.1 26 293-318 25-54 (125)
164 PF06123 CreD: Inner membrane 23.1 7.2E+02 0.016 24.4 12.5 46 181-230 300-345 (430)
165 PRK09776 putative diguanylate 23.1 1E+03 0.022 26.1 17.3 20 184-203 73-92 (1092)
166 PF05961 Chordopox_A13L: Chord 22.9 50 0.0011 22.9 1.2 20 304-323 6-25 (68)
167 TIGR00939 2a57 Equilibrative N 22.5 5.8E+02 0.013 25.0 9.1 13 306-318 180-192 (437)
168 PF04246 RseC_MucC: Positive r 22.5 82 0.0018 25.1 2.7 23 99-121 66-88 (135)
169 PRK09556 uhpT sugar phosphate 21.9 7.4E+02 0.016 24.0 10.5 9 268-276 374-382 (467)
170 KOG1623 Multitransmembrane pro 21.8 3.1E+02 0.0068 24.5 6.3 31 177-207 124-154 (243)
171 COG4147 DhlC Predicted symport 21.4 6E+02 0.013 25.4 8.5 139 181-325 361-511 (529)
172 COG3476 Tryptophan-rich sensor 20.4 3.2E+02 0.007 22.7 5.7 62 258-319 61-123 (161)
173 TIGR00881 2A0104 phosphoglycer 20.3 6.6E+02 0.014 22.8 10.0 17 191-207 41-57 (379)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=7.7e-39 Score=300.57 Aligned_cols=316 Identities=27% Similarity=0.509 Sum_probs=254.6
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHH
Q 017191 4 LRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLG 83 (375)
Q Consensus 4 ~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 83 (375)
+|+.+.+..|++..+.++...++.|.+++.+++|..+.++|+.+++++++++.+.++++++.++.+++++..+.+.|+++
T Consensus 9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g 88 (358)
T PLN00411 9 RREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG 88 (358)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999998766543221445688899999999999
Q ss_pred HHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHh------hccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCc
Q 017191 84 VTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIV------GLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPK 157 (375)
Q Consensus 84 ~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~------~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~ 157 (375)
++.+.+++.|++|++++.++++.+++|+++.++++++ +|||++++ +++|++++++|++++...+++.
T Consensus 89 -~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~------~~~G~~l~~~Gv~ll~~~~g~~ 161 (358)
T PLN00411 89 -SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVA------KVMGTILSLIGALVVIFYHGPR 161 (358)
T ss_pred -HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHH------HHHHHHHHHHHHHHHHHccCcc
Confidence 7888899999999999999999999999999999999 58888888 9999999999999988644432
Q ss_pred ccCcC-C-Cccc-cccc-cCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcC
Q 017191 158 LLNTE-F-LPEK-SFLF-RSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTE 233 (375)
Q Consensus 158 ~~~~~-~-~~~~-~~~~-~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 233 (375)
....+ + ..+. .... .......+..|+++++.++++|++|++++|+..+++++....++++..++.+...++....+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~ 241 (358)
T PLN00411 162 VFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVE 241 (358)
T ss_pred cccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHc
Confidence 11000 0 0000 0000 00112334679999999999999999999999888865667778888888777777666654
Q ss_pred CC-CcccccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHH
Q 017191 234 PD-PEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVI 312 (375)
Q Consensus 234 ~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil 312 (375)
.. ...|.......+..+++.+++ +.++|.+|++++++.||++++++.+++|+++++++++++||++++.+++|+++|+
T Consensus 242 ~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl 320 (358)
T PLN00411 242 KNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILIT 320 (358)
T ss_pred cCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 32 233322222344557777764 6789999999999999999999999999999999999999999999999999999
Q ss_pred hhhhheeeccccccc
Q 017191 313 LGLYAVLWGKAKDHF 327 (375)
Q Consensus 313 ~g~~l~~~~~~~~~~ 327 (375)
.|+++..+.|+|+.|
T Consensus 321 ~Gv~l~~~~~~~~~~ 335 (358)
T PLN00411 321 LGFYAVMWGKANEEK 335 (358)
T ss_pred HHHHHHHhhhhhhhh
Confidence 999999887666543
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=3.5e-33 Score=257.97 Aligned_cols=280 Identities=14% Similarity=0.145 Sum_probs=234.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHH
Q 017191 8 KPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTIN 87 (375)
Q Consensus 8 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 87 (375)
.-.+..++..++||.+++++|...+ +++|..++++|+.++.++++++...++++. .+++++......|.++...+
T Consensus 8 ~~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~ 82 (292)
T PRK11272 8 PLFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLRGHPL----PTLRQWLNAALIGLLLLAVG 82 (292)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHhCCCC----CcHHHHHHHHHHHHHHHHHH
Confidence 3356678899999999999998876 599999999999999999888865544321 35678888888998886778
Q ss_pred HHHHHhhh-cccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCcc
Q 017191 88 QNTYFEGL-YLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPE 166 (375)
Q Consensus 88 ~~~~~~al-~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~ 166 (375)
+.+++.+. ++++++.++++.++.|+++.+++.+ +|||++++ +++|++++++|+.++.. ++.
T Consensus 83 ~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~--~~~--------- 144 (292)
T PRK11272 83 NGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNS--GGN--------- 144 (292)
T ss_pred HHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhc--Ccc---------
Confidence 88999999 9999999999999999999999986 69999999 99999999999988762 110
Q ss_pred ccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchh
Q 017191 167 KSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLE 246 (375)
Q Consensus 167 ~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 246 (375)
.+....|++++++++++||.|.+..|+..++ ++...+.+++..+.+.+.+.....+.+.. ..++...
T Consensus 145 ---------~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 211 (292)
T PRK11272 145 ---------LSGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLT--ALPTLSG 211 (292)
T ss_pred ---------cccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCccc--ccCCHHH
Confidence 1123479999999999999999999987643 34566778888888887777665432211 1124467
Q ss_pred hHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccc
Q 017191 247 IFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKA 323 (375)
Q Consensus 247 ~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~ 323 (375)
|..+++.+++++.+++.+|++++|+.+++.++.+.+++|+++.+++++++||+++..+++|+++++.|+++..+.++
T Consensus 212 ~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 212 FLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999876544
No 3
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=100.00 E-value=4.8e-32 Score=251.28 Aligned_cols=280 Identities=16% Similarity=0.213 Sum_probs=220.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017191 9 PAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQ 88 (375)
Q Consensus 9 g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 88 (375)
..++.++++++||.+++++|..+++ ++|..+.++|+.++.+.+.++. ++++ .++ ......|++.....+
T Consensus 5 ~~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~--~~~~-----~~~---~~~~~~g~~~~~~~~ 73 (299)
T PRK11453 5 DGVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFV--ARPK-----VPL---NLLLGYGLTISFGQF 73 (299)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHh--cCCC-----Cch---HHHHHHHHHHHHHHH
Confidence 3466889999999999999998865 9999999999999877665543 2211 122 234455665545666
Q ss_pred HHHHhhhcc-cchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccc
Q 017191 89 NTYFEGLYL-ASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEK 167 (375)
Q Consensus 89 ~~~~~al~~-~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~ 167 (375)
.+++.++++ .+++.++++.+++|+++.+++++++|||++++ ++++++++++|+.++.. +. .
T Consensus 74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~--~~-~--------- 135 (299)
T PRK11453 74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIE--DS-L--------- 135 (299)
T ss_pred HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhcc--cc-C---------
Confidence 788899998 58899999999999999999999999999999 99999999999998872 11 0
Q ss_pred cccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCC--cHHHHHHHHHHHHHHHHHHHHHhcCCCC---cccccc
Q 017191 168 SFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYP--DHLSLSAWMCFLATLQSATFAIFTEPDP---EAWNLH 242 (375)
Q Consensus 168 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~ 242 (375)
++......|+.+++.++++|+.|.++.|+..++.+ +......+.+..+.+.........+++. ..+...
T Consensus 136 ------~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (299)
T PRK11453 136 ------NGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTI 209 (299)
T ss_pred ------CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccC
Confidence 11122357999999999999999999999866543 2234455556555554444444333321 112223
Q ss_pred cchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeecc
Q 017191 243 SSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGK 322 (375)
Q Consensus 243 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~ 322 (375)
+...|..++++++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|++++++|+++..+.+
T Consensus 210 ~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 210 DMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL 289 (299)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999887766
Q ss_pred c
Q 017191 323 A 323 (375)
Q Consensus 323 ~ 323 (375)
+
T Consensus 290 ~ 290 (299)
T PRK11453 290 R 290 (299)
T ss_pred h
Confidence 5
No 4
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=100.00 E-value=4.3e-32 Score=251.12 Aligned_cols=282 Identities=10% Similarity=0.068 Sum_probs=213.3
Q ss_pred CCcccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhcccc-CC-CCCHHHHHHHHH
Q 017191 1 MSSLRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYK-SS-SMGLRSFSLIFF 78 (375)
Q Consensus 1 m~~~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~-~~-~~~~~~~~~~~~ 78 (375)
|+|+++.+|++++++++++||..+++.|.. .+++|.++.++|+.++.+++.++...++++.. ++ ..+++++.. ..
T Consensus 1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~--~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 77 (296)
T PRK15430 1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI--YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-LA 77 (296)
T ss_pred CCchhhhhHHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-HH
Confidence 788889999999999999999999999975 35999999999999999888877655432211 01 113444433 33
Q ss_pred HHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcc
Q 017191 79 IALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKL 158 (375)
Q Consensus 79 ~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~ 158 (375)
.+.++.+.++.++++|+++++++.++++.++.|+++.+++++++|||++++ +++|++++++|+.++.. +.
T Consensus 78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~---~~- 147 (296)
T PRK15430 78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLW---TF- 147 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHH---Hc-
Confidence 566665889999999999999999999999999999999999999999999 99999999999999872 20
Q ss_pred cCcCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-cHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 017191 159 LNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYP-DHLSLSAWMCFLATLQSATFAIFTEPDPE 237 (375)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 237 (375)
. +. ..+.++++++||.|.+..|+..++.. +....+.+....+.....+. ......
T Consensus 148 ---------------~--~~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 203 (296)
T PRK15430 148 ---------------G--SL----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSSTS 203 (296)
T ss_pred ---------------C--Cc----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCCcc
Confidence 0 01 14578899999999999998753321 22333344444443332211 111111
Q ss_pred ccccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhh
Q 017191 238 AWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYA 317 (375)
Q Consensus 238 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l 317 (375)
.+...+...+..+...|+ .+.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+.+
T Consensus 204 ~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v 282 (296)
T PRK15430 204 HMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAI 282 (296)
T ss_pred cccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 111111112333344454 6889999999999999999999999999999999999999999999999999999888777
Q ss_pred eee
Q 017191 318 VLW 320 (375)
Q Consensus 318 ~~~ 320 (375)
...
T Consensus 283 ~~~ 285 (296)
T PRK15430 283 FVM 285 (296)
T ss_pred HHH
Confidence 654
No 5
>PRK11689 aromatic amino acid exporter; Provisional
Probab=100.00 E-value=1.3e-31 Score=247.77 Aligned_cols=285 Identities=15% Similarity=0.084 Sum_probs=215.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH
Q 017191 6 DYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVT 85 (375)
Q Consensus 6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 85 (375)
+.+++++++++.++||.+++..|...++ ++|..+.++|+.++.+++.++. ++++ .+++ .+...+.+.+...
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~--~~~~-----~~~~-~~~~~~~~~l~~~ 72 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTV--GFPR-----LRQF-PKRYLLAGGLLFV 72 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHc--cccc-----cccc-cHHHHHHHhHHHH
Confidence 4567889999999999999999998865 9999999999999999888663 1111 1111 2223344555557
Q ss_pred HHHHHHHhhhcc----cchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCc
Q 017191 86 INQNTYFEGLYL----ASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNT 161 (375)
Q Consensus 86 ~~~~~~~~al~~----~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~ 161 (375)
.+..+++.++++ .+++.++++.+++|+++.+++++++|||++++ +++|++++++|++++... ++.....
T Consensus 73 ~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~~-~~~~~~~ 145 (295)
T PRK11689 73 SYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLGG-DNGLSLA 145 (295)
T ss_pred HHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheecC-Cccchhh
Confidence 788888877764 57788899999999999999999999999999 999999999999998731 1101000
Q ss_pred CCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc
Q 017191 162 EFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNL 241 (375)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 241 (375)
+ . ..+......|+.+++.+++|||+|+++.|+..++. ++..... ..+.+.+.+.....+ +. .. .
T Consensus 146 ~---~------~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~~~---~~~~~~l~~~~~~~~-~~-~~-~ 209 (295)
T PRK11689 146 E---L------INNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITLFF---ILTALALWIKYFLSP-QP-AM-V 209 (295)
T ss_pred h---h------hhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhHHH---HHHHHHHHHHHHHhc-Cc-cc-c
Confidence 0 0 00111234699999999999999999999987776 4554422 223333333333322 21 11 1
Q ss_pred ccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeec
Q 017191 242 HSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWG 321 (375)
Q Consensus 242 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~ 321 (375)
.+...|..+++.++ +++++|.+|++++|+.++++++.+.+++|+++.+++++++||+++..+++|+++|+.|+++....
T Consensus 210 ~~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 210 FSLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred CCHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 23456777777775 79999999999999999999999999999999999999999999999999999999999887654
Q ss_pred cc
Q 017191 322 KA 323 (375)
Q Consensus 322 ~~ 323 (375)
++
T Consensus 289 ~~ 290 (295)
T PRK11689 289 TR 290 (295)
T ss_pred Hh
Confidence 43
No 6
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=100.00 E-value=6.5e-31 Score=242.91 Aligned_cols=278 Identities=10% Similarity=0.093 Sum_probs=224.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH
Q 017191 6 DYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVT 85 (375)
Q Consensus 6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 85 (375)
...++.+++++.++|+.++.+.|.+.++ ++|..+.++|++++.++++++...++ .+.++++++..+..|.+. +
T Consensus 10 ~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~~~-----~~~~~~~~~~~~~~g~~~-~ 82 (293)
T PRK10532 10 VWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKPWR-----LRFAKEQRLPLLFYGVSL-G 82 (293)
T ss_pred cchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhHHh-----ccCCHHHHHHHHHHHHHH-H
Confidence 5789999999999999999999999876 99999999999999988887643211 123678888888888876 7
Q ss_pred HHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCc
Q 017191 86 INQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLP 165 (375)
Q Consensus 86 ~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~ 165 (375)
..+.++++++++++++.++++..+.|+++.+++. |++. +..++.++++|+.++.. .+.
T Consensus 83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--------~~~~~~i~~~Gv~li~~-~~~--------- 140 (293)
T PRK10532 83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--------DFVWVVLAVLGLWFLLP-LGQ--------- 140 (293)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--------HHHHHHHHHHHHheeee-cCC---------
Confidence 8888999999999999999999999999988763 4433 44556788999988762 111
Q ss_pred cccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccch
Q 017191 166 EKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSL 245 (375)
Q Consensus 166 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 245 (375)
+.......|+++.+.++++|+.|.+..|+..++. ++... .+....+.+++.++....+... . .+..
T Consensus 141 --------~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~~~~-~---~~~~ 206 (293)
T PRK10532 141 --------DVSHVDLTGAALALGAGACWAIYILSGQRAGAEH-GPATV-AIGSLIAALIFVPIGALQAGEA-L---WHWS 206 (293)
T ss_pred --------CcccCChHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHH-HHHHHHHHHHHHHHHHHccCcc-c---CCHH
Confidence 1112235799999999999999999999988776 46655 4555666676666666443211 1 1233
Q ss_pred hhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccccc
Q 017191 246 EIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKD 325 (375)
Q Consensus 246 ~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~~ 325 (375)
.|..++++|++++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++|++|++...+.++||
T Consensus 207 ~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~ 286 (293)
T PRK10532 207 ILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRRE 286 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 55667899999999999999999999999999999999999999999999999999999999999999999987766554
Q ss_pred c
Q 017191 326 H 326 (375)
Q Consensus 326 ~ 326 (375)
.
T Consensus 287 ~ 287 (293)
T PRK10532 287 P 287 (293)
T ss_pred C
Confidence 4
No 7
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=100.00 E-value=8.2e-31 Score=238.52 Aligned_cols=259 Identities=17% Similarity=0.242 Sum_probs=221.3
Q ss_pred HHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 017191 20 YAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLAS 99 (375)
Q Consensus 20 ~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~ 99 (375)
||.+++..|..++++.++....+.|++++.+++.++...+ .+++++.+....|.++..+++.++++|+++++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~ 72 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR--------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLP 72 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc--------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8999999999988778999999999999988887765332 14566778888888888999999999999999
Q ss_pred hhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccccccccCCCCCch
Q 017191 100 SSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENW 179 (375)
Q Consensus 100 ~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (375)
+++++++.++.|+++.+++.+++|||++++ +++|++++++|+.++.. ++ +.+..
T Consensus 73 ~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~--~~------------------~~~~~ 126 (260)
T TIGR00950 73 VGEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLS--DG------------------NLSIN 126 (260)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhcc--CC------------------ccccc
Confidence 999999999999999999999999999999 99999999999999872 11 11234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhCC-cHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhh
Q 017191 180 LLGCLFLFASACCWSLWLILQVPVSASYP-DHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGS 258 (375)
Q Consensus 180 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 258 (375)
..|+++++.++++|+.+.+..|+..++.+ ++.....+.+..+.+.+.+.....+++. .+ +...|..+++.+++++
T Consensus 127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~ 202 (260)
T TIGR00950 127 PAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLGLIGT 202 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHHHHHH
Confidence 67999999999999999999999887763 2345555778888888877776543322 11 4457778889999999
Q ss_pred hHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhh
Q 017191 259 GVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLY 316 (375)
Q Consensus 259 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~ 316 (375)
.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++++.|+.
T Consensus 203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999863
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.97 E-value=6.1e-30 Score=237.73 Aligned_cols=286 Identities=15% Similarity=0.089 Sum_probs=223.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017191 11 MAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNT 90 (375)
Q Consensus 11 l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 90 (375)
++.++...+-....+..|.+++.-..|..++++|+.++.+.+.+.... +.+++ ++.++++++..+..|++. +++..+
T Consensus 5 ~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~g~~~-~~~~~~ 81 (302)
T TIGR00817 5 LLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSS-GLPKR-LKISSALLKLLLPVAIVH-TIGHVT 81 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHh-CCCCC-CCCCHHHHHHHHHHHHHH-HHHHHH
Confidence 344455555555667899998653669999999999887776555221 12222 456889999999999998 899999
Q ss_pred HHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCcccccc
Q 017191 91 YFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFL 170 (375)
Q Consensus 91 ~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~ 170 (375)
.+.|++|++++.++++.++.|+++++++++++|||++++ ++++++++++|+++.. ..
T Consensus 82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~---~~-------------- 138 (302)
T TIGR00817 82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALAS---DT-------------- 138 (302)
T ss_pred HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhc---CC--------------
Confidence 999999999999999999999999999999999999999 9999999999998754 11
Q ss_pred ccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhh--hCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcc---ccc----
Q 017191 171 FRSSGGENWLLGCLFLFASACCWSLWLILQVPVSA--SYPDHLSLSAWMCFLATLQSATFAIFTEPDPEA---WNL---- 241 (375)
Q Consensus 171 ~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~---- 241 (375)
+.+....|++++++++++|++|.+..|+..+ +. |+.....+++..+.+.+.|+....++.... +..
T Consensus 139 ----~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~ 213 (302)
T TIGR00817 139 ----ELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISG 213 (302)
T ss_pred ----cccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcc
Confidence 1122357999999999999999999999887 66 689999999999999999888765432110 100
Q ss_pred -ccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheee
Q 017191 242 -HSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLW 320 (375)
Q Consensus 242 -~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~ 320 (375)
.....+...++.+..+....+.++++++++.++++.+++.+++|++++++|++++||+++..+++|++++++|++++.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 214 VNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 0011121122223222333334566899999999999999999999999999999999999999999999999999987
Q ss_pred ccccccc
Q 017191 321 GKAKDHF 327 (375)
Q Consensus 321 ~~~~~~~ 327 (375)
.|+||++
T Consensus 294 ~k~~~~~ 300 (302)
T TIGR00817 294 VKAQKPK 300 (302)
T ss_pred HhccCcC
Confidence 7665543
No 9
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.96 E-value=1.1e-27 Score=220.32 Aligned_cols=275 Identities=12% Similarity=0.129 Sum_probs=202.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017191 10 AMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQN 89 (375)
Q Consensus 10 ~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 89 (375)
.++.++++++|+...+..|...++ -++ ..+++.....+++.++...+..+...+..+++ ++.....+.++...++.
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 78 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPAT-FWLLLAISAVANMVYFL 78 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchh-hHHHHHHHHHHHHHHHH
Confidence 567899999999999999966544 334 34777777777777776654212110222334 44444444444489999
Q ss_pred HHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccccc
Q 017191 90 TYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSF 169 (375)
Q Consensus 90 ~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~ 169 (375)
++++|+++.+++.++++.++.|+++.+++++++|||++++ +++|+.+++.|++++.. ++.
T Consensus 79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~---~~~----------- 138 (281)
T TIGR03340 79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGL---SRF----------- 138 (281)
T ss_pred HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhc---ccc-----------
Confidence 9999999999999999999999999999999999999999 99999999999998872 211
Q ss_pred cccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCc---HHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchh
Q 017191 170 LFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPD---HLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLE 246 (375)
Q Consensus 170 ~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 246 (375)
. .....|+.++++++++|+.|.+..|+..++.++ ......+.+..+.+.........+.. .+. .....
T Consensus 139 -----~-~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~ 209 (281)
T TIGR03340 139 -----A-QHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGR--SMF-PYARQ 209 (281)
T ss_pred -----c-ccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhcc--chh-hhHHH
Confidence 1 112358888999999999999999876544421 11122233322212222222211111 111 12234
Q ss_pred hHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhh
Q 017191 247 IFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYA 317 (375)
Q Consensus 247 ~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l 317 (375)
++.+++.+.+++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|++++++|+++
T Consensus 210 ~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 210 ILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 55667788889999999999999999999999999999999999999999999999999999999999876
No 10
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.96 E-value=1.1e-26 Score=213.81 Aligned_cols=298 Identities=13% Similarity=0.101 Sum_probs=236.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH
Q 017191 7 YKPAMAMLALQFSYAVVALSTRAALLQGMN-PRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVT 85 (375)
Q Consensus 7 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 85 (375)
++..++.=..+++-..+...+....+.+.+ |....++.++.-.++..+....+++++...+.-+++|++.++.+++- .
T Consensus 12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D-v 90 (334)
T PF06027_consen 12 WIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD-V 90 (334)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH-H
Confidence 455566666777778888888888776676 88888888887777777766555443221233456778888889999 8
Q ss_pred HHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCc
Q 017191 86 INQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLP 165 (375)
Q Consensus 86 ~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~ 165 (375)
.++.+.+.|++|++.+.++++..+..+++++++++++|+|.++. +++|+++++.|+.++...+.....
T Consensus 91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~~~------ 158 (334)
T PF06027_consen 91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLSGS------ 158 (334)
T ss_pred HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeecccccc------
Confidence 99999999999999999999999999999999999999999999 999999999999998853222111
Q ss_pred cccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCC-Ccccccccc
Q 017191 166 EKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPD-PEAWNLHSS 244 (375)
Q Consensus 166 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~ 244 (375)
++.+.++..+|+++++.++++||+++++.++..++. +......+..+++.++..+.....|.+ .....+. .
T Consensus 159 ------~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~-~ 230 (334)
T PF06027_consen 159 ------DSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILERSGIESIHWT-S 230 (334)
T ss_pred ------cCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCC-h
Confidence 012345678999999999999999999999999988 588888999999999988887766543 2222221 2
Q ss_pred hhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeecccc
Q 017191 245 LEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAK 324 (375)
Q Consensus 245 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~ 324 (375)
..+..++. ..++...-|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++|++|.+++...+++
T Consensus 231 ~~~~~~v~-~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~ 309 (334)
T PF06027_consen 231 QVIGLLVG-YALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP 309 (334)
T ss_pred hhHHHHHH-HHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence 22322222 33366777888889999999999999999999999999999999999999999999999999999887665
Q ss_pred cc
Q 017191 325 DH 326 (375)
Q Consensus 325 ~~ 326 (375)
.+
T Consensus 310 ~~ 311 (334)
T PF06027_consen 310 EE 311 (334)
T ss_pred cc
Confidence 44
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.96 E-value=1.2e-26 Score=219.00 Aligned_cols=284 Identities=16% Similarity=0.131 Sum_probs=225.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccccCCCC--CHHHHHHHHHHHHH
Q 017191 6 DYKPAMAMLALQFSYAVVALSTRAALLQGMN-PRVFVVYRQAIATLFMAPMAYLSSRKYKSSSM--GLRSFSLIFFIALL 82 (375)
Q Consensus 6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~ 82 (375)
+.+..++.+....+-.......|..++. ++ |..++++|+++++++....+....+++ ++. .+++++.++..|++
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~llp~gl~ 123 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATGFRKI--PRIKSLKLFLKNFLPQGLC 123 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhCCCCC--CCCCCHHHHHHHHHHHHHH
Confidence 4566677777777778888999999876 99 999999999999887655543322222 333 34578899999999
Q ss_pred HHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcC
Q 017191 83 GVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTE 162 (375)
Q Consensus 83 ~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~ 162 (375)
+. ..+...+.|+++++++.++++..+.|+++++++++++|||++++ +++++++++.|+++... .
T Consensus 124 ~~-~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~---~------ 187 (350)
T PTZ00343 124 HL-FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASV---K------ 187 (350)
T ss_pred HH-HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheec---c------
Confidence 94 44666779999999999999999999999999999999999999 99999999999999872 1
Q ss_pred CCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCC------cHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 017191 163 FLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYP------DHLSLSAWMCFLATLQSATFAIFTEPDP 236 (375)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 236 (375)
+.+....|++++++++++|+++++..|+..++.+ ++.....+....+.++++|+....|...
T Consensus 188 ------------~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~ 255 (350)
T PTZ00343 188 ------------ELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKK 255 (350)
T ss_pred ------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 1122467999999999999999999999876541 3555666668889988888887554321
Q ss_pred --cccc----cccchhhHHHHhhhhhhhhHhHHHHHH----HhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhh
Q 017191 237 --EAWN----LHSSLEIFCCFFSGAIGSGVSFCVQAW----CISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLV 306 (375)
Q Consensus 237 --~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~----a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~i 306 (375)
..+. ......+..+++ .++.+++++++|+. +++++++...++..+++|++++++|++++||+++..+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~i 334 (350)
T PTZ00343 256 WVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYL 334 (350)
T ss_pred HHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHH
Confidence 1110 001112233444 34568899999985 999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhhheeec
Q 017191 307 GAIGVILGLYAVLWG 321 (375)
Q Consensus 307 G~~lil~g~~l~~~~ 321 (375)
|++++++|++++.+-
T Consensus 335 G~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 335 GMAVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999998754
No 12
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.95 E-value=1.5e-25 Score=203.29 Aligned_cols=249 Identities=13% Similarity=0.072 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccc----cCCCCCHHH-HHHHHHHHHH
Q 017191 8 KPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKY----KSSSMGLRS-FSLIFFIALL 82 (375)
Q Consensus 8 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~----~~~~~~~~~-~~~~~~~g~~ 82 (375)
+|++++++++++||.++++.|. .. +++|.+++++|++++.+++.++...+++++ +.++.++++ +......|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LK-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hc-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 5889999999999999999998 44 499999999999999988877664443221 101122333 4456677777
Q ss_pred HHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcC
Q 017191 83 GVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTE 162 (375)
Q Consensus 83 ~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~ 162 (375)
. +.++.++++|++++++++++++.++.|+++++++++++|||++++ ++++++++++|++++.. +.
T Consensus 80 ~-~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~---~~----- 144 (256)
T TIGR00688 80 I-GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIV---LK----- 144 (256)
T ss_pred H-HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHH---Hc-----
Confidence 5 899999999999999999999999999999999999999999999 99999999999998863 10
Q ss_pred CCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccc
Q 017191 163 FLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLH 242 (375)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 242 (375)
++. . .+++.++++|+.|.+..|+..++ +.......... ......+..... ........+
T Consensus 145 ------------~~~-~----~~~l~aa~~~a~~~i~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~ 203 (256)
T TIGR00688 145 ------------GSL-P----WEALVLAFSFTAYGLIRKALKNT--DLAGFCLETLS-LMPVAIYYLLQT-DFATVQQTN 203 (256)
T ss_pred ------------CCc-h----HHHHHHHHHHHHHHHHHhhcCCC--CcchHHHHHHH-HHHHHHHHHHHh-ccCcccccC
Confidence 000 1 35688999999999999987543 23222221111 111111111111 111101111
Q ss_pred cchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHH
Q 017191 243 SSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALL 295 (375)
Q Consensus 243 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~ 295 (375)
+...|..+++.|++ +.++|.++++++|+.++++++.+.|++|+++.+++++.
T Consensus 204 ~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 204 PFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred chhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 22367788888875 88999999999999999999999999999999999864
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.94 E-value=8.7e-24 Score=194.96 Aligned_cols=284 Identities=24% Similarity=0.314 Sum_probs=219.9
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHH
Q 017191 4 LRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLG 83 (375)
Q Consensus 4 ~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 83 (375)
++...+....++..+.|+......|...+...++....+.|...+.++..+.....+.... ...+.++...+.+.+.
T Consensus 3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 79 (292)
T COG0697 3 RALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLR---PALRPWLLLLLLALLG 79 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhccccc---ccccchHHHHHHHHHH
Confidence 4456778888999999999999999886543667777777999888874434322211111 1222255666666677
Q ss_pred HHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHH-HhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcC
Q 017191 84 VTINQNTYFEGLYLASSSMASAMGNLIPAITFVMAS-IVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTE 162 (375)
Q Consensus 84 ~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~-l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~ 162 (375)
...++.+++.++++++++.++++.++.|+++.+++. +++|||++++ +++++.+++.|++++.. ++..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~---~~~~--- 147 (292)
T COG0697 80 LALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILL---GGGG--- 147 (292)
T ss_pred HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheec---CCCc---
Confidence 699999999999999999999999999999999997 7679999999 99999999999999983 2111
Q ss_pred CCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHH-HHHHHHHHHHHHHHHhcCCCCccccc
Q 017191 163 FLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSA-WMCFLATLQSATFAIFTEPDPEAWNL 241 (375)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~ 241 (375)
...+ ...|+.+.++++++|+++.+..|+.. +. ++..... +.+........+... ...+ ..
T Consensus 148 -----------~~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~ 208 (292)
T COG0697 148 -----------GGIL-SLLGLLLALAAALLWALYTALVKRLS-RL-GPVTLALLLQLLLALLLLLLFFL-SGFG----AP 208 (292)
T ss_pred -----------chhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ChHHHHHHHHHHHHHHHHHHHHh-cccc----cc
Confidence 0111 56899999999999999999999887 44 3555555 343322222222222 1111 12
Q ss_pred ccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeec
Q 017191 242 HSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWG 321 (375)
Q Consensus 242 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~ 321 (375)
.....+..+.+.|++++++++.++.+++++.++...+.+.+++|+++.++++++++|+++..+++|+++++.|+.+...+
T Consensus 209 ~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 209 ILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 24457888899999888899999999999999999999999999999999999999999999999999999999998776
No 14
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.92 E-value=8.2e-23 Score=174.52 Aligned_cols=275 Identities=13% Similarity=0.093 Sum_probs=230.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017191 9 PAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQ 88 (375)
Q Consensus 9 g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 88 (375)
+++.++.+...--....+.|..+.. ++|..++.+|..++.++++++.. .++ .+.+++++..+...|+.. ..-|
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~R--Pwr---~r~~~~~~~~~~~yGvsL-g~MN 85 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFR--PWR---RRLSKPQRLALLAYGVSL-GGMN 85 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhh--HHH---hccChhhhHHHHHHHHHH-HHHH
Confidence 5788888888888888899988865 99999999999999999988753 222 346889999999999999 8889
Q ss_pred HHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCcccc
Q 017191 89 NTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKS 168 (375)
Q Consensus 89 ~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~ 168 (375)
.+||.+++.+|.+.+..+.++.|+.+.+++.- +.+ +.+.+.+++.|+.++.. .++
T Consensus 86 l~FY~si~riPlGiAVAiEF~GPL~vA~~~sR------r~~------d~vwvaLAvlGi~lL~p-~~~------------ 140 (292)
T COG5006 86 LLFYLSIERIPLGIAVAIEFTGPLAVALLSSR------RLR------DFVWVALAVLGIWLLLP-LGQ------------ 140 (292)
T ss_pred HHHHHHHHhccchhhhhhhhccHHHHHHHhcc------chh------hHHHHHHHHHHHHhhee-ccC------------
Confidence 99999999999999999999999998887542 445 77788899999998872 122
Q ss_pred ccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhH
Q 017191 169 FLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIF 248 (375)
Q Consensus 169 ~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (375)
+..+.+..|..+++.++.||+.|.+..+|..+.. +..+-....+..++++..|+.....+. ...++..+.
T Consensus 141 -----~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~-~g~~g~a~gm~vAaviv~Pig~~~ag~----~l~~p~ll~ 210 (292)
T COG5006 141 -----SVWSLDPVGVALALGAGACWALYIVLGQRAGRAE-HGTAGVAVGMLVAALIVLPIGAAQAGP----ALFSPSLLP 210 (292)
T ss_pred -----CcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccC-CCchHHHHHHHHHHHHHhhhhhhhcch----hhcChHHHH
Confidence 3345568999999999999999999999988665 577788888999999999988854322 112344566
Q ss_pred HHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccccc
Q 017191 249 CCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKD 325 (375)
Q Consensus 249 ~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~~ 325 (375)
.-+..+++++.+.|.+-..++++.+....+.+..++|.++.+.|++++||++|+.||.|+++|+.+..-..+..+|+
T Consensus 211 laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~ 287 (292)
T COG5006 211 LALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKP 287 (292)
T ss_pred HHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCC
Confidence 66888999999999999999999999999999999999999999999999999999999999999987666654443
No 15
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.92 E-value=1.6e-22 Score=177.46 Aligned_cols=281 Identities=13% Similarity=0.094 Sum_probs=223.4
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhcccc--CCCCCHHHHHHHHHHHH
Q 017191 4 LRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYK--SSSMGLRSFSLIFFIAL 81 (375)
Q Consensus 4 ~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~ 81 (375)
++..+|+++.+.+.++||..+...|.. +..++.++...|..-+.+++..+....++++. .-..++|.+....+.++
T Consensus 3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll--~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~ 80 (293)
T COG2962 3 KDSRKGILLALLAYLLWGLLPLYFKLL--EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTAL 80 (293)
T ss_pred CcccchhHHHHHHHHHHHHHHHHHHHH--ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHH
Confidence 556789999999999999999999976 45999999999999999988887766554433 11235566777777777
Q ss_pred HHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCc
Q 017191 82 LGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNT 161 (375)
Q Consensus 82 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~ 161 (375)
.. ..++..|.+|......-++++=++.+|++.++++.+|+|||+++. |++++.++.+||.......|.
T Consensus 81 li-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g~----- 148 (293)
T COG2962 81 LI-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLGS----- 148 (293)
T ss_pred HH-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcCC-----
Confidence 77 899999999999999999999999999999999999999999999 999999999999999863222
Q ss_pred CCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc
Q 017191 162 EFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNL 241 (375)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 241 (375)
.. ..++.-++.|++|...-|+. +. |+.+-...-+..-........+..+...+....
T Consensus 149 ----------------lp----wval~la~sf~~Ygl~RK~~--~v-~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~ 205 (293)
T COG2962 149 ----------------LP----WVALALALSFGLYGLLRKKL--KV-DALTGLTLETLLLLPVALIYLLFLADSGQFLQQ 205 (293)
T ss_pred ----------------Cc----HHHHHHHHHHHHHHHHHHhc--CC-chHHhHHHHHHHHhHHHHHHHHHHhcCchhhhc
Confidence 11 23455688999999886654 33 344444444444444444444433322211222
Q ss_pred ccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeec
Q 017191 242 HSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWG 321 (375)
Q Consensus 242 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~ 321 (375)
.+...+..+...|. .|.++..++..+.|+++-+..+.++|.+|..-.+++++++||+++..+++..++|-+|++++...
T Consensus 206 ~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d 284 (293)
T COG2962 206 NANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSID 284 (293)
T ss_pred CCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34556667777777 69999999999999999999999999999999999999999999999999999999999998764
Q ss_pred c
Q 017191 322 K 322 (375)
Q Consensus 322 ~ 322 (375)
.
T Consensus 285 ~ 285 (293)
T COG2962 285 G 285 (293)
T ss_pred H
Confidence 3
No 16
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.89 E-value=2.7e-21 Score=178.00 Aligned_cols=275 Identities=15% Similarity=0.093 Sum_probs=208.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017191 9 PAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQ 88 (375)
Q Consensus 9 g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 88 (375)
++++.++++++||...+..|... +.++.++. |..++.+++..+....+.++ ...++.+..-++.|++. ..++
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~~---~~~~~~~~~g~l~G~~w-~ig~ 73 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLPE---FWALSIFLVGLLSGAFW-ALGQ 73 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCCc---ccccHHHHHHHHHHHHH-Hhhh
Confidence 47889999999999999999763 57777765 77777777766655543211 11245555566666665 8999
Q ss_pred HHHHhhhcccchhhHhhhhh-hhHHHHHHHHHHhhccccCCCccchhhh----hhhHHHHhhhHhHHhhhcCCcccCcCC
Q 017191 89 NTYFEGLYLASSSMASAMGN-LIPAITFVMASIVGLEKIDLGSVRSVAK----ILGTIFCVGGAISMALLRGPKLLNTEF 163 (375)
Q Consensus 89 ~~~~~al~~~~~~~a~~l~~-~~pi~~~ll~~l~~~e~~~~~~~~~~~~----~~g~~l~~~Gv~l~~~~~~~~~~~~~~ 163 (375)
.+|+.++++.+.+.+..+.+ +.+++..+++.+++|||.+++ + ++|++++++|++++...++++..
T Consensus 74 ~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~~~---- 143 (290)
T TIGR00776 74 INQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKSAG---- 143 (290)
T ss_pred hhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEeccccccc----
Confidence 99999999999999999987 999999999999999999999 8 99999999998888632111000
Q ss_pred CccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHH---HHHHHHHHHHHHhcCCCCcccc
Q 017191 164 LPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMC---FLATLQSATFAIFTEPDPEAWN 240 (375)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~ 240 (375)
+.+..+...|..++++++++|+.|.+..|+. ++ ++.+..+.+. ..++.+...... .. ..+
T Consensus 144 ---------~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~~---~~-~~~- 206 (290)
T TIGR00776 144 ---------IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAIGMVIGGIIFNLGHI---LA-KPL- 206 (290)
T ss_pred ---------cccccchhhHHHHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHHHHHHHHHHHHHHHh---cc-cch-
Confidence 0000234679999999999999999999976 35 5777744443 334333332221 00 111
Q ss_pred cccchhhHHHHhhhhhhhhHhHHHHHHHhc-cCCcchhhhhhhHHHHHHHHHHHHHhcccccchhh----hhHHHHHhhh
Q 017191 241 LHSSLEIFCCFFSGAIGSGVSFCVQAWCIS-KRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSL----VGAIGVILGL 315 (375)
Q Consensus 241 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~-~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~----iG~~lil~g~ 315 (375)
.+...+..++ .|++ .++++.+|..+.+ +.+++.++.+.+.+|+.+.+++++++||+.+..++ +|+++++.|+
T Consensus 207 -~~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~ 283 (290)
T TIGR00776 207 -KKYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAA 283 (290)
T ss_pred -HHHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHH
Confidence 1223344444 7886 7999999999999 99999999999999999999999999999999999 9999999999
Q ss_pred hheeec
Q 017191 316 YAVLWG 321 (375)
Q Consensus 316 ~l~~~~ 321 (375)
.+....
T Consensus 284 ~l~~~~ 289 (290)
T TIGR00776 284 NILGIG 289 (290)
T ss_pred HHHhcc
Confidence 886543
No 17
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.89 E-value=1.2e-24 Score=186.75 Aligned_cols=294 Identities=15% Similarity=0.060 Sum_probs=221.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH
Q 017191 6 DYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVT 85 (375)
Q Consensus 6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 85 (375)
..+|.++..++.+.-..+.+..| .+ + .+|.+..-.|++..+++-.|....++.... .+....+++++.|..+ .
T Consensus 36 p~~gl~l~~vs~ff~~~~vv~t~-~~-e-~~p~e~a~~r~l~~mlit~pcliy~~~~v~---gp~g~R~~LiLRg~mG-~ 108 (346)
T KOG4510|consen 36 PNLGLLLLTVSYFFNSCMVVSTK-VL-E-NDPMELASFRLLVRMLITYPCLIYYMQPVI---GPEGKRKWLILRGFMG-F 108 (346)
T ss_pred CccCceehhhHHHHhhHHHhhhh-hh-c-cChhHhhhhhhhhehhhhheEEEEEeeeee---cCCCcEEEEEeehhhh-h
Confidence 45677777777555444444444 43 3 799999999988777777766554444321 2333455788899999 7
Q ss_pred HHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCc
Q 017191 86 INQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLP 165 (375)
Q Consensus 86 ~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~ 165 (375)
.+....|||++|.+.++++++..+.|+++.+++++++||+.++. +.++..+.+.|+++++ +.|.+.++..+.
T Consensus 109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~------eaL~s~itl~GVVLIv--RPpFlFG~~t~g 180 (346)
T KOG4510|consen 109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKF------EALGSLITLLGVVLIV--RPPFLFGDTTEG 180 (346)
T ss_pred hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHH------HHHHHHHhhheEEEEe--cCCcccCCCccc
Confidence 77788889999999999999999999999999999999999999 9999999999999998 344433221111
Q ss_pred cccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccc-cc
Q 017191 166 EKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLH-SS 244 (375)
Q Consensus 166 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~ 244 (375)
+ +++..+....|.+.++.+.++.|-..++.|+..++.+ ..-...+..+.+.+......... + .+.++ ..
T Consensus 181 ~-----~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h-~~msvsyf~~i~lV~s~I~~~~i-g---~~~lP~cg 250 (346)
T KOG4510|consen 181 E-----DSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAH-AIMSVSYFSLITLVVSLIGCASI-G---AVQLPHCG 250 (346)
T ss_pred c-----ccccccccCCchHHHHHhHhhhhhHHHHHHHhhcccc-EEEEehHHHHHHHHHHHHHHhhc-c---ceecCccc
Confidence 1 1122344567888889999999999999999988873 33333444444444443333322 1 33333 45
Q ss_pred hhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeecccc
Q 017191 245 LEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAK 324 (375)
Q Consensus 245 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~ 324 (375)
.+|+.++.+|+ .+.+++.+...++++..+...+++.+++.+++.+++++++|+.|+++.|+|+++++.+.+....+|..
T Consensus 251 kdr~l~~~lGv-fgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kwa 329 (346)
T KOG4510|consen 251 KDRWLFVNLGV-FGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKWA 329 (346)
T ss_pred cceEEEEEehh-hhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHHh
Confidence 67788888898 68899999999999999999999999999999999999999999999999999999998887766554
Q ss_pred c
Q 017191 325 D 325 (375)
Q Consensus 325 ~ 325 (375)
+
T Consensus 330 ~ 330 (346)
T KOG4510|consen 330 G 330 (346)
T ss_pred c
Confidence 4
No 18
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.83 E-value=2.1e-18 Score=160.21 Aligned_cols=279 Identities=11% Similarity=0.083 Sum_probs=216.1
Q ss_pred HHHHHHHHH-CCCC--hHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccch
Q 017191 24 ALSTRAALL-QGMN--PRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASS 100 (375)
Q Consensus 24 ~~~~k~~~~-~~~~--p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~ 100 (375)
.++...... .... |..+++..++...++..+.....+++ +.++..++..+..+++. .++..+-+.|++|++.
T Consensus 16 g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~ 90 (303)
T PF08449_consen 16 GILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP----KSRKIPLKKYAILSFLF-FLASVLSNAALKYISY 90 (303)
T ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc----CCCcChHHHHHHHHHHH-HHHHHHHHHHHHhCCh
Confidence 344444443 2233 78888998888887766665444422 22445566777788888 8899999999999999
Q ss_pred hhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccccccccCCCCCchH
Q 017191 101 SMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWL 180 (375)
Q Consensus 101 ~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (375)
+.-.++....|+++++++.+++|+|.+++ ++.++++..+|+++....+..+..+. ......+.
T Consensus 91 p~~~~~ks~~~i~vmi~~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~~~~-----------~~~~~~~~ 153 (303)
T PF08449_consen 91 PTQIVFKSSKPIPVMILGVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSSSSS-----------NSSSFSSA 153 (303)
T ss_pred HHHHHHhhhHHHHHHHHHHHhcCccccHH------HHHHHHHHHhhHheeeeccccccccc-----------ccccccch
Confidence 99999999999999999999999999999 99999999999999986332221110 11222334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCC-cHHHHHHHHHHHHHHHHHHHHHh--cCCCCccc--ccccchhhHHHHhhhh
Q 017191 181 LGCLFLFASACCWSLWLILQVPVSASYP-DHLSLSAWMCFLATLQSATFAIF--TEPDPEAW--NLHSSLEIFCCFFSGA 255 (375)
Q Consensus 181 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~g~ 255 (375)
.|+++.+++.++.|+..+.+++..++++ ++....++...++.+...+.... .++....+ ....+..+..++...+
T Consensus 154 ~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~ 233 (303)
T PF08449_consen 154 LGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL 233 (303)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH
Confidence 5999999999999999999999987665 67888999999988888777776 22211111 1122334555555555
Q ss_pred hhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccccc
Q 017191 256 IGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKD 325 (375)
Q Consensus 256 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~~ 325 (375)
++.++.....+..++.++...+++..++-+++++++++++++++++.+|+|+++++.|..+..+.|+|+
T Consensus 234 -~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 234 -TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred -HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 677888888899999999999999999999999999999999999999999999999999999888765
No 19
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.83 E-value=2e-19 Score=162.16 Aligned_cols=302 Identities=16% Similarity=0.201 Sum_probs=224.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHCCC--ChHHHHHHHHHHHHHHHHHHH-------HHhhcccc-C---------
Q 017191 5 RDYKPAMAMLALQFSYAVVALSTRAALLQGM--NPRVFVVYRQAIATLFMAPMA-------YLSSRKYK-S--------- 65 (375)
Q Consensus 5 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~--~p~~~~~~r~~~~~~~l~~~~-------~~~~~~~~-~--------- 65 (375)
|...|++++++..++|-.+.-+.+..++.+- .|+..++.....-.+.+.++. ...+|.++ .
T Consensus 11 r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~d~ 90 (416)
T KOG2765|consen 11 RWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEADA 90 (416)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhhhh
Confidence 3678999999999999999999999987533 377776654433333333211 11111000 0
Q ss_pred -------------------------------------------------CCCCH------------HHHHHHHHHHHHHH
Q 017191 66 -------------------------------------------------SSMGL------------RSFSLIFFIALLGV 84 (375)
Q Consensus 66 -------------------------------------------------~~~~~------------~~~~~~~~~g~~~~ 84 (375)
+...+ +..+..+....+.
T Consensus 91 e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~lW- 169 (416)
T KOG2765|consen 91 EGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPLW- 169 (416)
T ss_pred hccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHHH-
Confidence 00111 2233444455555
Q ss_pred HHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCC
Q 017191 85 TINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFL 164 (375)
Q Consensus 85 ~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~ 164 (375)
++++.+++.|+.+++++..+++..+..+|+..++.+|.+||+++. +++++.+++.|++++...+... .
T Consensus 170 F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~~~s~~-~----- 237 (416)
T KOG2765|consen 170 FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTMGDSKQ-N----- 237 (416)
T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEeccccc-c-----
Confidence 899999999999999999999999999999999999999999999 9999999999999998632221 1
Q ss_pred ccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHH---HHHHHHHHHHHHHHHhcC-CCCcccc
Q 017191 165 PEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSA---WMCFLATLQSATFAIFTE-PDPEAWN 240 (375)
Q Consensus 165 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~-~~~~~~~ 240 (375)
++........|+++++++++.||+|.++.|+...++.+.+.+.. +..++..+++.|..++.. -....++
T Consensus 238 -------~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~ 310 (416)
T KOG2765|consen 238 -------SDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFE 310 (416)
T ss_pred -------ccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCccc
Confidence 01345566899999999999999999999998766632333332 333333444443333211 1223455
Q ss_pred cccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheee
Q 017191 241 LHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLW 320 (375)
Q Consensus 241 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~ 320 (375)
.+.......+++.++++++++-++|.+|.-.++|..+++-+.++.+.+++.+.++-|.++++.+++|...|++|.+.++.
T Consensus 311 lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~ 390 (416)
T KOG2765|consen 311 LPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNI 390 (416)
T ss_pred CCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheec
Confidence 56666777788889999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cccccc
Q 017191 321 GKAKDH 326 (375)
Q Consensus 321 ~~~~~~ 326 (375)
..+...
T Consensus 391 ~~~~~~ 396 (416)
T KOG2765|consen 391 SSENSK 396 (416)
T ss_pred cccccc
Confidence 765443
No 20
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.75 E-value=4.9e-18 Score=154.73 Aligned_cols=285 Identities=12% Similarity=0.066 Sum_probs=223.9
Q ss_pred HHHHHHHHHHHHHHHHHHHH--CCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017191 13 MLALQFSYAVVALSTRAALL--QGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNT 90 (375)
Q Consensus 13 ~l~~~~~~~~~~~~~k~~~~--~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 90 (375)
.....++--......|..++ ..--|..++..+...+.+.+.....++..+.. +..++..+..++.+|++. +++..+
T Consensus 22 ~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~-~~~~~~~~~~llpl~~~~-~~~~v~ 99 (316)
T KOG1441|consen 22 FAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPS-KISSKLPLRTLLPLGLVF-CISHVL 99 (316)
T ss_pred HHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCC-ccccccchHHHHHHHHHH-HHHHHh
Confidence 33344444445567788887 33348888888888877777776655555443 333556788999999999 999999
Q ss_pred HHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCcccccc
Q 017191 91 YFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFL 170 (375)
Q Consensus 91 ~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~ 170 (375)
-+.++.+.+++.++.+..++|++++++++++.+|+.++. .+..++....|+.+...
T Consensus 100 ~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~------------------ 155 (316)
T KOG1441|consen 100 GNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASV------------------ 155 (316)
T ss_pred cchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeee------------------
Confidence 999999999999999999999999999999999999999 99999999999999883
Q ss_pred ccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhh--hCC-cHHHHHHHHHHHHHHHHH-HHHHhcCCCCc-c-cccccc
Q 017191 171 FRSSGGENWLLGCLFLFASACCWSLWLILQVPVSA--SYP-DHLSLSAWMCFLATLQSA-TFAIFTEPDPE-A-WNLHSS 244 (375)
Q Consensus 171 ~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~--~~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~-~-~~~~~~ 244 (375)
.+.+.+..|...++++.+..+..+++.|+..+ +++ |++++..++.-.+.+.++ |+....+++.. . ......
T Consensus 156 ---~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~ 232 (316)
T KOG1441|consen 156 ---TELSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWF 232 (316)
T ss_pred ---ccccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccc
Confidence 23345578999999999999999999999984 222 799999999999999888 77776655432 0 010111
Q ss_pred hhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeecccc
Q 017191 245 LEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAK 324 (375)
Q Consensus 245 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~ 324 (375)
......++.. ++..+-+...+..+.+++|...++.+...-++.++.|+++|+++.++.+..|+++.++|++++.+.|.+
T Consensus 233 ~~~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~ 311 (316)
T KOG1441|consen 233 VTFLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLK 311 (316)
T ss_pred hhhHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhh
Confidence 1222333333 345555566678899999999999999999999999999999999999999999999999999988876
Q ss_pred ccc
Q 017191 325 DHF 327 (375)
Q Consensus 325 ~~~ 327 (375)
+++
T Consensus 312 ~~~ 314 (316)
T KOG1441|consen 312 EKK 314 (316)
T ss_pred hhc
Confidence 553
No 21
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.71 E-value=6.9e-18 Score=144.46 Aligned_cols=266 Identities=13% Similarity=0.147 Sum_probs=209.6
Q ss_pred HHHHHHHHHHHCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccch
Q 017191 22 VVALSTRAALLQGMN-PRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASS 100 (375)
Q Consensus 22 ~~~~~~k~~~~~~~~-p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~ 100 (375)
.....+......++| |...+|+.+..-+++..++..+|+. . -...|...++++++. +=++.+...|.||++.
T Consensus 32 ~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~-~-----~~~~~~hYilla~~D-VEaNy~vV~AyQyTsm 104 (336)
T KOG2766|consen 32 STAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRK-Y-----IKAKWRHYILLAFVD-VEANYFVVKAYQYTSM 104 (336)
T ss_pred cchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhH-H-----HHHHHHHhhheeEEe-ecccEEEeeehhhcch
Confidence 333344444444454 8888999999999999988876663 2 224466688888888 7788888899999999
Q ss_pred hhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccccccccCCCCCchH
Q 017191 101 SMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWL 180 (375)
Q Consensus 101 ~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (375)
+.++++..-..+.+.+++|+|+|.|.++. ++.|+.+|++|+.+++..+-.. . ++.++++..
T Consensus 105 tSi~lLDcwaip~v~~lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~sDV~a-g------------d~aggsnp~ 165 (336)
T KOG2766|consen 105 TSIMLLDCWAIPCVLVLSWFFLKTRYRLM------KISGVVICIVGVVMVVFSDVHA-G------------DRAGGSNPV 165 (336)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhhh------eeeeEEeEecceEEEEEeeecc-c------------cccCCCCCc
Confidence 99999999888899999999999999999 9999999999999998533222 1 135567788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhH
Q 017191 181 LGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGV 260 (375)
Q Consensus 181 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 260 (375)
+|+++.++++-+||+.++..+.+.++. |...++....++|+++...-......+.....+. ......+. ..++.++
T Consensus 166 ~GD~lvi~GATlYaVSNv~EEflvkn~-d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~w~--~~i~~yl~-f~L~MFl 241 (336)
T KOG2766|consen 166 KGDFLVIAGATLYAVSNVSEEFLVKNA-DRVELMGFLGLFGAIISAIQFIFERHHVSTLHWD--SAIFLYLR-FALTMFL 241 (336)
T ss_pred cCcEEEEecceeeeeccccHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHhhhccceeeEeeh--HHHHHHHH-HHHHHHH
Confidence 999999999999999999999999998 6999999999999999888844333332222211 22222222 3346667
Q ss_pred hHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhhee
Q 017191 261 SFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVL 319 (375)
Q Consensus 261 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~ 319 (375)
-|.+.-..+|.-+++..++-..++-.++.++ ..||-+.+|...+..+.+..|.+++.
T Consensus 242 lYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs 298 (336)
T KOG2766|consen 242 LYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYS 298 (336)
T ss_pred HHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEee
Confidence 7777788899999999999999999999998 56788899999999999999998873
No 22
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.69 E-value=2.2e-16 Score=121.30 Aligned_cols=135 Identities=16% Similarity=0.272 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017191 9 PAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQ 88 (375)
Q Consensus 9 g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 88 (375)
..++.++++++||...++.|..++ ++||...++.|..+..+++..+++..++.......++|.|..+.+.|+.+ ++++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-glsw 81 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLSW 81 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHHH
Confidence 567899999999999999999984 59999999999999999888888777665442346889999999999887 9999
Q ss_pred HHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHh
Q 017191 89 NTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMA 151 (375)
Q Consensus 89 ~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 151 (375)
.+||+|++...++.+..+..+.|+++++++++|+|||++.. +|+|+++..+|++++.
T Consensus 82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailvs 138 (140)
T COG2510 82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeEe
Confidence 99999999999999999999999999999999999999999 9999999999998775
No 23
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.63 E-value=5.8e-13 Score=120.83 Aligned_cols=299 Identities=12% Similarity=0.080 Sum_probs=212.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC---CChHHHHHHHHHHHHHHHHHHHHHhhcc---ccC------CCCCHHHHHH
Q 017191 8 KPAMAMLALQFSYAVVALSTRAALLQG---MNPRVFVVYRQAIATLFMAPMAYLSSRK---YKS------SSMGLRSFSL 75 (375)
Q Consensus 8 ~g~l~~l~~~~~~~~~~~~~k~~~~~~---~~p~~~~~~r~~~~~~~l~~~~~~~~~~---~~~------~~~~~~~~~~ 75 (375)
.-.+.++...+-++...+..|+.-..+ ..|-..++.--.+-.++.....+...++ +.. ....+++...
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 456677778888899999999886554 5566666665555555555554444211 110 1235556777
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcC
Q 017191 76 IFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRG 155 (375)
Q Consensus 76 ~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~ 155 (375)
+.+.+++. ++.+.++|.++.+.+++..++.+++..+.|+++.++++++|++++ ||.+..+.++|+.++.....
T Consensus 95 ~~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 95 VSVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhccCC
Confidence 88888888 787889999999999999999999999999999999999999999 99999999999999983111
Q ss_pred CcccCcCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHH-HHHHHHHHHHHHHHHhcCC
Q 017191 156 PKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSA-WMCFLATLQSATFAIFTEP 234 (375)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~ 234 (375)
+ .....+ .....+...|....+.+.++-++..++.++..|+.+.+..+.- ...++|.+..+...+..+.
T Consensus 168 ~---~~~a~~-------~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~ 237 (345)
T KOG2234|consen 168 S---PTGAKS-------ESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDG 237 (345)
T ss_pred C---CCCccC-------CCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 1 110000 1334566789999999999999999999999977654444443 4444444444444444433
Q ss_pred CCcccccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhh
Q 017191 235 DPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILG 314 (375)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g 314 (375)
+...|.. .-..|-...+..++..+++-.+....+|+.+-..=.....+..+++.+.++.+++-+||....+|+.+++.+
T Consensus 238 ~~i~~~g-ff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~S 316 (345)
T KOG2234|consen 238 EAINEYG-FFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILS 316 (345)
T ss_pred cccccCC-ccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHH
Confidence 3222211 111222233333344555556666778888888888888899999999999999999999999999999999
Q ss_pred hhheeecccc
Q 017191 315 LYAVLWGKAK 324 (375)
Q Consensus 315 ~~l~~~~~~~ 324 (375)
+.++...+.+
T Consensus 317 i~lY~~~P~~ 326 (345)
T KOG2234|consen 317 IFLYSLYPAR 326 (345)
T ss_pred HHHhhcCCcc
Confidence 9999855443
No 24
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.61 E-value=9.2e-15 Score=123.94 Aligned_cols=255 Identities=13% Similarity=0.099 Sum_probs=197.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHH
Q 017191 38 RVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVM 117 (375)
Q Consensus 38 ~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll 117 (375)
..+++.++.+-.++.-++..+++.. +.+....+....+++.. .++...-+.|+|+.+=....+-.+-.|+-++++
T Consensus 54 laLVf~qC~~N~vfAkvl~~ir~~~----~~D~t~~~~YaAcs~sY-LlAMVssN~Alq~vpYPTqVlgKScKPIPVMil 128 (337)
T KOG1580|consen 54 LALVFFQCTANTVFAKVLFLIRKKT----EIDNTPTKMYAACSASY-LLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL 128 (337)
T ss_pred HHHHHHHHHHHHHHHHhheeecccc----cccCCcchHHHHHHHHH-HHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence 4455666666665554443333321 22333344556666655 788889999999999887778889999999999
Q ss_pred HHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHH
Q 017191 118 ASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWL 197 (375)
Q Consensus 118 ~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~ 197 (375)
++++.+++.+|+ +..++++.++|+++... +..... +.++.....|.++.+++-..-++..
T Consensus 129 GVl~~~KsY~w~------kY~cVL~IV~GValFmY-K~~Kv~-------------g~e~~t~g~GElLL~lSL~mDGlTg 188 (337)
T KOG1580|consen 129 GVLFAHKSYHWR------KYCCVLMIVVGVALFMY-KENKVG-------------GAEDKTFGFGELLLILSLAMDGLTG 188 (337)
T ss_pred ehhhhcccccHH------HHHHHHHHHHHHHHhhc-cccccC-------------CCcccccchHHHHHHHHHHhcccch
Confidence 999999999999 99999999999999984 322222 1334455789999999999999999
Q ss_pred HHHHHhhhhCC-cHHHHHHHHHHHHHHHHHHHHHhcCCC--CcccccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCc
Q 017191 198 ILQVPVSASYP-DHLSLSAWMCFLATLQSATFAIFTEPD--PEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGP 274 (375)
Q Consensus 198 v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~ 274 (375)
..+.+..+.+. ..-..+++..+.+.+.+..-.+++.+- +..+..-.+..|+.+..+++ ++++++++.+..+...||
T Consensus 189 ~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~FgP 267 (337)
T KOG1580|consen 189 SIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEFGP 267 (337)
T ss_pred hHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHhCC
Confidence 99888776653 456778888888888777666554321 11222335667888888888 899999999999999999
Q ss_pred chhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhhe
Q 017191 275 LFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAV 318 (375)
Q Consensus 275 ~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~ 318 (375)
..-|++..+.-.|+++.++++++..++..||+|..+++.|+..=
T Consensus 268 LtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 268 LTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD 311 (337)
T ss_pred eeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence 99999999999999999999999999999999999999997764
No 25
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.61 E-value=1e-13 Score=123.74 Aligned_cols=232 Identities=13% Similarity=0.071 Sum_probs=171.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhH
Q 017191 68 MGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGA 147 (375)
Q Consensus 68 ~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv 147 (375)
.++|+...+.+.+++. .+.+.+.+.++++.+++..+++.++..+++++++++++|+|++++ ||+++.+.++|+
T Consensus 12 ~~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv 84 (244)
T PF04142_consen 12 KSPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGV 84 (244)
T ss_pred HhHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHH
Confidence 3678888899999998 899999999999999999999999999999999999999999999 999999999999
Q ss_pred hHHhhhcCCcccCcCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-cHHHHHHHHHHHHHHHHH
Q 017191 148 ISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYP-DHLSLSAWMCFLATLQSA 226 (375)
Q Consensus 148 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~ 226 (375)
.++...+.......+. ++ . ..+........|.++.++++++-++..++.++..|+.+ +....+......|.+..+
T Consensus 85 ~lv~~~~~~~~~~~~~-~~--~-~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~ 160 (244)
T PF04142_consen 85 VLVQLSSSQSSDNSSS-SS--V-HHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNL 160 (244)
T ss_pred heeecCCccccccccc-cc--c-ccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHH
Confidence 9987522221100000 00 0 00112345679999999999999999999999988864 344555556666666655
Q ss_pred HHHHhcCCCCcccccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhh
Q 017191 227 TFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLV 306 (375)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~i 306 (375)
+.....+.+.. .+......+-...+..++...++-.+....+|+.+...=+.....+.+++.++++++++.+++....+
T Consensus 161 ~~~~~~~~~~~-~~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~l 239 (244)
T PF04142_consen 161 LALLLSDGSAI-SESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLL 239 (244)
T ss_pred HHHhccccccc-ccCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhh
Confidence 55444332110 11111111112223333455556677788999999999999999999999999999999999999999
Q ss_pred hHHHH
Q 017191 307 GAIGV 311 (375)
Q Consensus 307 G~~li 311 (375)
|+.++
T Consensus 240 g~~~V 244 (244)
T PF04142_consen 240 GAALV 244 (244)
T ss_pred heecC
Confidence 98753
No 26
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.57 E-value=4.2e-14 Score=108.82 Aligned_cols=136 Identities=15% Similarity=0.112 Sum_probs=118.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhHh
Q 017191 182 GCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVS 261 (375)
Q Consensus 182 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 261 (375)
..++++++++++++..+..|--.++. ||...++.+.....+.+..+.+.+.+ .......++..|..+...|+ .++++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~-~~~~~~~~~k~~lflilSGl-a~gls 80 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGN-WQAGGEIGPKSWLFLILSGL-AGGLS 80 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCc-eecccccCcceehhhhHHHH-HHHHH
Confidence 56889999999999999999888888 79999999999988888877776543 22222236778888888886 89999
Q ss_pred HHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheee
Q 017191 262 FCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLW 320 (375)
Q Consensus 262 ~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~ 320 (375)
..+|++|+|...++.+..+.-++|+++.+++++++||+++..+++|+.+|++|.+++.+
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999999999999999999999999999999999988654
No 27
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.57 E-value=7.9e-13 Score=118.25 Aligned_cols=289 Identities=13% Similarity=0.101 Sum_probs=215.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHH--HHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHH
Q 017191 7 YKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVV--YRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGV 84 (375)
Q Consensus 7 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~--~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 84 (375)
..+.+..+.-.++--...+..|..+.+---|..+.. ++.+.+.+.+...-..+--+. +..+++..+..+...++.
T Consensus 11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~--~~l~~~~~kk~~P~~~lf- 87 (314)
T KOG1444|consen 11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNF--RPLDLRTAKKWFPVSLLF- 87 (314)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeec--CCcChHHHHHHccHHHHH-
Confidence 344445555555555566777888764222444444 777777666655533332232 567889999999999988
Q ss_pred HHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCC
Q 017191 85 TINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFL 164 (375)
Q Consensus 85 ~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~ 164 (375)
.+...+--.+++|.+....+++.+..|+++++...+++|.|++.. .+.++...++|..+...
T Consensus 88 ~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~------------ 149 (314)
T KOG1444|consen 88 VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAF------------ 149 (314)
T ss_pred HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhcc------------
Confidence 788888889999999999999999999999999999999999998 99999988888887763
Q ss_pred ccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-cHHHHHHHHHHHHHHHHHHHHHhcCCCC----ccc
Q 017191 165 PEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYP-DHLSLSAWMCFLATLQSATFAIFTEPDP----EAW 239 (375)
Q Consensus 165 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~~~ 239 (375)
.+......|..+++...++-+.+.+..|+..+..+ +.....++..+.+........+++++.. ..-
T Consensus 150 ---------~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~ 220 (314)
T KOG1444|consen 150 ---------TDLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFD 220 (314)
T ss_pred ---------ccceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcc
Confidence 22223345899999999999999999998765543 4556777888888777777776664311 111
Q ss_pred ccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhhee
Q 017191 240 NLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVL 319 (375)
Q Consensus 240 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~ 319 (375)
+......+..+...++++-++.| +-.++.+..+++..++++..+-..+.+...++++++.++...+|..+-++|.+++.
T Consensus 221 ~~~~~~~~~~~~lScv~gf~isy-~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~ 299 (314)
T KOG1444|consen 221 NWSDSSVLVVMLLSCVMGFGISY-TSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYS 299 (314)
T ss_pred cccchhHHHHHHHHHHHHHHHHH-HHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHh
Confidence 12234456666666775555555 45689999999999999988888888888888888999999999999999999998
Q ss_pred ecccccc
Q 017191 320 WGKAKDH 326 (375)
Q Consensus 320 ~~~~~~~ 326 (375)
+.+.+++
T Consensus 300 ~~~~~~k 306 (314)
T KOG1444|consen 300 YATFRKK 306 (314)
T ss_pred hhhhhhc
Confidence 8776554
No 28
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.53 E-value=4.3e-14 Score=113.37 Aligned_cols=125 Identities=22% Similarity=0.388 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 017191 18 FSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYL 97 (375)
Q Consensus 18 ~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~ 97 (375)
++||...++.|...++ .+|....++|+..+.+ +.++....+++.. ...+++++...+..+.++..+++.++++++++
T Consensus 1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 77 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPF-KNLSPRQWLWLLFLGLLGTALAYLLYFYALKY 77 (126)
T ss_pred ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccc-cCCChhhhhhhhHhhccceehHHHHHHHHHHh
Confidence 4799999999999866 9999999999999998 6665555554433 45688888899999998669999999999999
Q ss_pred cchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHh
Q 017191 98 ASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMA 151 (375)
Q Consensus 98 ~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 151 (375)
.+++.++++.++.|+++.+++++++||+++++ +++|+++++.|++++.
T Consensus 78 ~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 78 ISASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLIS 125 (126)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 9999999999999875
No 29
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.50 E-value=1.1e-12 Score=115.83 Aligned_cols=265 Identities=15% Similarity=0.136 Sum_probs=205.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHH
Q 017191 36 NPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITF 115 (375)
Q Consensus 36 ~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ 115 (375)
++....+.+.+.+.++-.... ..++. ....++.|..+...++.+ .++..|.+.|++|++=-...+-...-.+-++
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l--~~~k~--~~~~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVm 124 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAML--KWWKK--ELSGVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVM 124 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHH--hcccc--cCCCCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHH
Confidence 456666777767666654333 33333 233556678888888888 8899999999999998888888888888899
Q ss_pred HHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccccccccCCCCCchHHHHHHHHHHHHHHHH
Q 017191 116 VMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSL 195 (375)
Q Consensus 116 ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~ 195 (375)
+++.++.|.|.+.+ +.+...+.-.|+.+..+.+..+..+ ..+..+...|..+....-++-++
T Consensus 125 lmg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~s~~------------~~g~~ns~~G~~Ll~~~L~fDgf 186 (327)
T KOG1581|consen 125 LMGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSDSSS------------KSGRENSPIGILLLFGYLLFDGF 186 (327)
T ss_pred HHHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCCCcc------------ccCCCCchHhHHHHHHHHHHHhh
Confidence 99999999999999 9999999999999888643222110 13334567899999999999999
Q ss_pred HHHHHHHhhhhCC-cHHHHHHHHHHHHHHHHHHHHHhcCCCCc--ccccccchhhHHHHhhhhhhhhHhHHHHHHHhccC
Q 017191 196 WLILQVPVSASYP-DHLSLSAWMCFLATLQSATFAIFTEPDPE--AWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKR 272 (375)
Q Consensus 196 ~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~ 272 (375)
.+..+.++.+++. ++...++...+++.+......+....... .+-...+..+.-++.... ++.+++.+.++-+++.
T Consensus 187 Tn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~~F 265 (327)
T KOG1581|consen 187 TNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIERF 265 (327)
T ss_pred HHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHhhc
Confidence 9999999887654 68888999999888877766443222111 111123445556666666 6889999999999999
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeecccc
Q 017191 273 GPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAK 324 (375)
Q Consensus 273 ~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~ 324 (375)
|+...+.++.+.-++++.++.+.+|.+++..||+|..+++.|+.+-...|++
T Consensus 266 Gslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 266 GSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999987666555
No 30
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.50 E-value=3.2e-12 Score=112.88 Aligned_cols=253 Identities=13% Similarity=0.109 Sum_probs=185.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccc--CCCCCHHHHH-HHHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHH
Q 017191 37 PRVFVVYRQAIATLFMAPMAYLSSRKYK--SSSMGLRSFS-LIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAI 113 (375)
Q Consensus 37 p~~~~~~r~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~ 113 (375)
|..++..++++-.++-......++++.. +-..+|++.. ++...++.. ++.-.+-+++++|++.+..++..+..++|
T Consensus 45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~yVtlSlYTM~KSSsi~F 123 (349)
T KOG1443|consen 45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-ALDIGLSNWSLEYVTLSLYTMTKSSSILF 123 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-hcccccccceeeeeeeeeeeeccccHHHH
Confidence 7888888887777666665555544332 1346677654 555666666 89999999999999999999999999999
Q ss_pred HHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccccccccCCCCCchHHHHHHHHHHHHHH
Q 017191 114 TFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCW 193 (375)
Q Consensus 114 ~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~ 193 (375)
+.+++.+|.-||+++. -..-+++..+|+++... +. .+....|.++.++++++-
T Consensus 124 IllFs~if~lEk~~w~------L~l~v~lI~~Glflft~-Ks--------------------Tqf~i~Gf~lv~~aS~~s 176 (349)
T KOG1443|consen 124 ILLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFTY-KS--------------------TQFNIEGFFLVLAASLLS 176 (349)
T ss_pred HHHHHHHHHhHHHHHH------HHHHHHHHhhheeEEEe-cc--------------------cceeehhHHHHHHHHHhh
Confidence 9999999999999998 88888888888888874 11 223456877777777666
Q ss_pred HHHHHHHHHhhhhC----CcHHHHHHHHHHHHHHHHHHHHHhcCCCCc-----ccccccc-hhhHHHHhhhhhhhhHhHH
Q 017191 194 SLWLILQVPVSASY----PDHLSLSAWMCFLATLQSATFAIFTEPDPE-----AWNLHSS-LEIFCCFFSGAIGSGVSFC 263 (375)
Q Consensus 194 a~~~v~~k~~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~g~~~~~~~~~ 263 (375)
++-....+..+++. ++|....+...-...+.+.+..+.+|+... .+...++ ..+..+..++. ++..++.
T Consensus 177 GlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~ 255 (349)
T KOG1443|consen 177 GLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFL 255 (349)
T ss_pred hhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHH
Confidence 65555544444443 267777887777778888888888776421 1222222 22333333332 3444443
Q ss_pred HH---HHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhhe
Q 017191 264 VQ---AWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAV 318 (375)
Q Consensus 264 ~~---~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~ 318 (375)
+- +....+++....++.+...-+.+.+++..+.+|+++...|+|..+.+.|+.+.
T Consensus 256 l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 256 LEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 32 34477888889999999999999999999999999999999999999999997
No 31
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.47 E-value=2e-13 Score=109.49 Aligned_cols=125 Identities=17% Similarity=0.357 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhHhHHHHHHHhc
Q 017191 191 CCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCIS 270 (375)
Q Consensus 191 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~ 270 (375)
++||.+.+..|+..++. |+....++++..+.+ ..+.....+... ....+...+...++.+++++.+++.+++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 47899999999999988 699999999999987 666665544332 23335567778888888889999999999999
Q ss_pred cCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhhee
Q 017191 271 KRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVL 319 (375)
Q Consensus 271 ~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~ 319 (375)
+.+++.++.+.+++|+++.++++++++|+++..+++|++++++|+++..
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988753
No 32
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.32 E-value=9.6e-10 Score=98.02 Aligned_cols=251 Identities=17% Similarity=0.156 Sum_probs=172.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCC--HHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhhhh-hhhHH
Q 017191 36 NPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMG--LRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMG-NLIPA 112 (375)
Q Consensus 36 ~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~-~~~pi 112 (375)
+|..-.+-- .++++++..+..+..+ |..+ .+.+...++.|++. .+++...+.+.++.+.+.+.++. .++-+
T Consensus 11 ~~~~Q~lG~-t~Gali~alv~~~~~~----p~~~~~~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLv 84 (269)
T PF06800_consen 11 KPANQILGT-TIGALIFALVVFLFRQ----PAFSMSGTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLV 84 (269)
T ss_pred cHHHHHHHH-HHHHHHHHHHHHHHhC----CCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHH
Confidence 344443332 3344444444444433 3344 48888889999998 99999999999999999999996 68888
Q ss_pred HHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccccccccCCCCCchHHHHHHHHHHHHH
Q 017191 113 ITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACC 192 (375)
Q Consensus 113 ~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~ 192 (375)
.+.++++++++|.-+.. .-.-..+++++.++|+.+....++.+.. .+++.+...|....+.+.+.
T Consensus 85 g~sl~gv~~fgEW~~~~--~~~~G~~Al~liiiGv~lts~~~~~~~~-------------~~~~~~~~kgi~~Ll~stig 149 (269)
T PF06800_consen 85 GTSLIGVLFFGEWTTTT--QKIIGFLALVLIIIGVILTSYQDKKSDK-------------SSSKSNMKKGILALLISTIG 149 (269)
T ss_pred HHHHHHHhhcCCCCCcc--hHHHHHHHHHHHHHHHHHhccccccccc-------------cccccchhhHHHHHHHHHHH
Confidence 99999999999998876 1111234777888888887742222110 01244567899999999999
Q ss_pred HHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhHhHHHHHHHhccC
Q 017191 193 WSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKR 272 (375)
Q Consensus 193 ~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~ 272 (375)
|..|.+..|.. +. ++....+-+...-.+....+....++. .. ....|.. +..|+ .-.++..++..+.++.
T Consensus 150 y~~Y~~~~~~~--~~-~~~~~~lPqaiGm~i~a~i~~~~~~~~--~~---~k~~~~n-il~G~-~w~ignl~~~is~~~~ 219 (269)
T PF06800_consen 150 YWIYSVIPKAF--HV-SGWSAFLPQAIGMLIGAFIFNLFSKKP--FF---EKKSWKN-ILTGL-IWGIGNLFYLISAQKN 219 (269)
T ss_pred HHHHHHHHHhc--CC-ChhHhHHHHHHHHHHHHHHHhhccccc--cc---ccchHHh-hHHHH-HHHHHHHHHHHhHHhc
Confidence 99999998853 34 566666655443333333333322111 11 1122323 22344 4567788889999999
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHhcccccchh----hhhHHHHHhhhhh
Q 017191 273 GPLFSAMFNPLCTVIVTILAALLLHEEIYTGS----LVGAIGVILGLYA 317 (375)
Q Consensus 273 ~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~----~iG~~lil~g~~l 317 (375)
|.+..=.+..+.++++.+.+.+++||+=+..+ ++|.++++.|.++
T Consensus 220 G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 220 GVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred cchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999877654 4688888888764
No 33
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.31 E-value=6.6e-11 Score=107.49 Aligned_cols=134 Identities=15% Similarity=0.272 Sum_probs=115.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHCCCCh--HHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHH
Q 017191 5 RDYKPAMAMLALQFSYAVVALSTRAALLQGMNP--RVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALL 82 (375)
Q Consensus 5 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p--~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 82 (375)
...+|.+++++++++|+...+..|...++ .++ .....+++.++.+++.++....++.. ..+.+++...+..+++
T Consensus 125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 200 (260)
T TIGR00950 125 INPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPNP---QALSLQWGALLYLGLI 200 (260)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCCC---CcchHHHHHHHHHHHH
Confidence 34679999999999999999999998654 664 45555789999998888876654332 2367788888889998
Q ss_pred HHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHh
Q 017191 83 GVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAI 148 (375)
Q Consensus 83 ~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ 148 (375)
+..+++.+|++++++.+++.++.+.++.|+++.++++++++|++++. +++|..+.+.|+.
T Consensus 201 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~~ 260 (260)
T TIGR00950 201 GTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhcC
Confidence 87899999999999999999999999999999999999999999999 9999999998863
No 34
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.29 E-value=2.7e-10 Score=99.52 Aligned_cols=280 Identities=14% Similarity=0.083 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHH---CCC----ChHHHHHHHHHHHHHHHHHHHHHhhccccC---C-------CC--CHHHHHHHHHHHH
Q 017191 21 AVVALSTRAALL---QGM----NPRVFVVYRQAIATLFMAPMAYLSSRKYKS---S-------SM--GLRSFSLIFFIAL 81 (375)
Q Consensus 21 ~~~~~~~k~~~~---~~~----~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~---~-------~~--~~~~~~~~~~~g~ 81 (375)
..+.+.+|.+=+ ++. .|+.....-++.-..+++.+.+++.+...+ . .. +.+ ....+..++
T Consensus 16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~-p~lfl~Pal 94 (372)
T KOG3912|consen 16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN-PVLFLPPAL 94 (372)
T ss_pred cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC-cceecChHH
Confidence 345667776622 222 255555555555567777776666543220 0 00 111 223344777
Q ss_pred HHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCc
Q 017191 82 LGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNT 161 (375)
Q Consensus 82 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~ 161 (375)
+- ..+..+.|.|+.+++++.-+.+.....+|+.+++.-+++.+++.+ +|+|+.....|++++...+-. .+.
T Consensus 95 ~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~d~~--~~~ 165 (372)
T KOG3912|consen 95 CD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSLDVH--LVT 165 (372)
T ss_pred HH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeeeecc--ccc
Confidence 77 677778889999999999999999999999999999999999999 999999999999998742111 111
Q ss_pred CCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-cHHHHHHHHHHHHHHHHHHHHHhc----CCCC
Q 017191 162 EFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYP-DHLSLSAWMCFLATLQSATFAIFT----EPDP 236 (375)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~----~~~~ 236 (375)
++ -.+-++...|+++.+.+-+.-|+.+++-+|..++.+ +|.....|..++|..++..++... .++.
T Consensus 166 ~p---------~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~s 236 (372)
T KOG3912|consen 166 DP---------YTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDS 236 (372)
T ss_pred CC---------ccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCc
Confidence 00 122355678999999999999999999999887765 799999999999966554444321 1111
Q ss_pred c------cccc-------ccchhhHHHHhhhhhhhhHh-HHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccc
Q 017191 237 E------AWNL-------HSSLEIFCCFFSGAIGSGVS-FCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYT 302 (375)
Q Consensus 237 ~------~~~~-------~~~~~~~~~~~~g~~~~~~~-~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~ 302 (375)
. .|.. ........+...|...+..- .+.-.+-.|..+++.-.++-.+...+--+++.....|.+..
T Consensus 237 fS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~l 316 (372)
T KOG3912|consen 237 FSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHL 316 (372)
T ss_pred CcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHH
Confidence 1 0110 01111222233333222111 11122346778888888999999999999999999999999
Q ss_pred hhhhhHHHHHhhhhhee
Q 017191 303 GSLVGAIGVILGLYAVL 319 (375)
Q Consensus 303 ~~~iG~~lil~g~~l~~ 319 (375)
.|+.|.++.+.|+++++
T Consensus 317 lqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 317 LQILGFLILIMGIILYN 333 (372)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999975
No 35
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.23 E-value=4.1e-11 Score=94.44 Aligned_cols=104 Identities=18% Similarity=0.308 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcccc-CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHH
Q 017191 42 VYRQAIATLFMAPMAYLSSRKYK-SSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASI 120 (375)
Q Consensus 42 ~~r~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l 120 (375)
.+|++.+.+++..+...+++.+. .+..+++.+.+.+..|+++...++.++++|+++.+ +.++++.+++|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 57888998888888776554322 12234455677778888885699999999999999 58889999999999999999
Q ss_pred hhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 121 VGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 121 ~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
++|||++++ ++.+++++++|++++..
T Consensus 81 ~~~er~~~~------~~~a~~l~~~Gv~li~~ 106 (113)
T PF13536_consen 81 FFKERLSPR------RWLAILLILIGVILIAW 106 (113)
T ss_pred HhcCCCCHH------HHHHHHHHHHHHHHHhh
Confidence 999999999 99999999999999984
No 36
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.17 E-value=1.7e-10 Score=97.44 Aligned_cols=290 Identities=13% Similarity=0.104 Sum_probs=195.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH-CCCC-hHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHH
Q 017191 7 YKPAMAMLALQFSYAVVALSTRAALL-QGMN-PRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGV 84 (375)
Q Consensus 7 ~~g~l~~l~~~~~~~~~~~~~k~~~~-~~~~-p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 84 (375)
....+--+.+.++. .+..|..++ .|++ -+.+.+.+.+...+-+..+-..+-.+. +.++.+..+..+.+.
T Consensus 8 ~~~~lsYc~sSIlm---TltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~f-----R~t~aK~WfpiSfLL- 78 (309)
T COG5070 8 LTASLSYCFSSILM---TLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEF-----RLTKAKKWFPISFLL- 78 (309)
T ss_pred chHHHHHHHHHHHH---HHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhe-----ehhhhhhhcCHHHHH-
Confidence 33344444444443 333455443 2333 245556666665555554433332222 223333333444444
Q ss_pred HHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCC
Q 017191 85 TINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFL 164 (375)
Q Consensus 85 ~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~ 164 (375)
..-...-..+++|.+....+++.++..+.++....+++|.|++-. +....++.+..-+.....+.+..
T Consensus 79 v~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl------~l~SFilMvlSS~va~w~D~q~~------ 146 (309)
T COG5070 79 VVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSL------ELLSFILMVLSSVVATWGDQQAS------ 146 (309)
T ss_pred HHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchh------hHHHHHHHHHHHHHhccchhhHH------
Confidence 344445568999999999999999999999999999999999999 99888888777666653111100
Q ss_pred ccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-cHHHHHHHHHHHHHHHHHHHHHhcCCCCcc--ccc
Q 017191 165 PEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYP-DHLSLSAWMCFLATLQSATFAIFTEPDPEA--WNL 241 (375)
Q Consensus 165 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~ 241 (375)
+-..+..+.|.+++..-.+.-+.|....|+..+-.+ .....+++..+.+.-++..+.+.+|..... -+.
T Consensus 147 --------~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~ann 218 (309)
T COG5070 147 --------AFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANN 218 (309)
T ss_pred --------HHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcC
Confidence 011224467999999999999999999887653321 356778889999888888888877643221 111
Q ss_pred ccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeec
Q 017191 242 HSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWG 321 (375)
Q Consensus 242 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~ 321 (375)
.+...+.++...|+ +++.--++-.|+++.++.+..++++.++-.-..+.|.++++|+.+..++..+.+-..+..++...
T Consensus 219 l~~d~l~am~ISgl-~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYava 297 (309)
T COG5070 219 LSVDSLMAMFISGL-CSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVA 297 (309)
T ss_pred CChHHHHHHHHHHH-HHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 22334555666666 44444457789999999999999999999999999999999999999999998888887777776
Q ss_pred ccccc
Q 017191 322 KAKDH 326 (375)
Q Consensus 322 ~~~~~ 326 (375)
|++++
T Consensus 298 ks~k~ 302 (309)
T COG5070 298 KSKKQ 302 (309)
T ss_pred HHHHH
Confidence 65543
No 37
>PRK13499 rhamnose-proton symporter; Provisional
Probab=99.15 E-value=3.9e-08 Score=91.28 Aligned_cols=300 Identities=13% Similarity=0.015 Sum_probs=185.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHH-HHHHHHHHHHHH-HHHhhcccc--CCCCCHHHHHHHHHHH
Q 017191 5 RDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVY-RQAIATLFMAPM-AYLSSRKYK--SSSMGLRSFSLIFFIA 80 (375)
Q Consensus 5 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~-r~~~~~~~l~~~-~~~~~~~~~--~~~~~~~~~~~~~~~g 80 (375)
+...|++..+++.++||+..+-.|.. +..+- +.... -.+++.++.-.. ..+..+... ....+.+.+...++.|
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~~--k~w~w-E~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G 80 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKKV--KKWSW-ETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG 80 (345)
T ss_pred hhHHHHHHHHHHHHHhhccccccccc--CCCch-hHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence 45789999999999999999999974 32332 22111 111111111100 111111100 1224677888888999
Q ss_pred HHHHHHHHHHHHhhhcccchhhHhhh-hhhhHHHHHHHHHHhhcccc---CCCccchhhhhhhHHHHhhhHhHHhhhcCC
Q 017191 81 LLGVTINQNTYFEGLYLASSSMASAM-GNLIPAITFVMASIVGLEKI---DLGSVRSVAKILGTIFCVGGAISMALLRGP 156 (375)
Q Consensus 81 ~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~pi~~~ll~~l~~~e~~---~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~ 156 (375)
++. ..++..++.++++.+.+.+..+ ..++-++..++..++++|-. +. .-+....+|+++.++|+++...-+..
T Consensus 81 ~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t--~~g~~~~~gv~liliGi~l~s~Ag~~ 157 (345)
T PRK13499 81 ALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLAT--NGGRMTLLGVLVALIGVAIVGRAGQL 157 (345)
T ss_pred HHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHcccccccccc--chHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 998 9999999999999999999988 47999999999999998764 32 23444778999999999998852111
Q ss_pred cccCcCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHH-------HHHHHhh-hhCCcHHHHHHHHHH---HHHHHH
Q 017191 157 KLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWL-------ILQVPVS-ASYPDHLSLSAWMCF---LATLQS 225 (375)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~-------v~~k~~~-~~~~~~~~~~~~~~~---~~~i~~ 225 (375)
...+. ++ +..++.+..+|..+++++.+.++.|+ ...+... ... ++.....-+.. .+.++.
T Consensus 158 k~~~~---~~-----~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~-~~~~~~lp~~~~~~~G~~~~ 228 (345)
T PRK13499 158 KERKM---GI-----KKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGV-DPLYAALPSYVVIMGGGAIT 228 (345)
T ss_pred ccccc---cc-----ccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCC-CchHHHHHHHHHHHHHHHHH
Confidence 10000 00 00234566899999999999999999 4433211 122 33333333333 444433
Q ss_pred HH-HHHh---cCCCCccccc-cc-----chhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhh---h-hhHHHHHHHHH
Q 017191 226 AT-FAIF---TEPDPEAWNL-HS-----SLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAM---F-NPLCTVIVTIL 291 (375)
Q Consensus 226 ~~-~~~~---~~~~~~~~~~-~~-----~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~---~-~~~~pv~~~~~ 291 (375)
.. +... ..++...... .. ..........|+ .=.+++.++..+.++.+...... + +.+..+++.+.
T Consensus 229 n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistlw 307 (345)
T PRK13499 229 NLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLW 307 (345)
T ss_pred HHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHh
Confidence 32 2221 2121111111 11 123333334444 56677778888888876654433 3 47788999999
Q ss_pred HHHHhccccc------chhhhhHHHHHhhhhheeec
Q 017191 292 AALLLHEEIY------TGSLVGAIGVILGLYAVLWG 321 (375)
Q Consensus 292 ~~l~~~e~~~------~~~~iG~~lil~g~~l~~~~ 321 (375)
|.+ +||.=+ ..-++|.+++++|..+....
T Consensus 308 Gi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 308 GLV-LKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred hhh-hhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 994 899766 55578999999998887654
No 38
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.14 E-value=1.9e-09 Score=99.71 Aligned_cols=136 Identities=18% Similarity=0.168 Sum_probs=113.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH
Q 017191 6 DYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVT 85 (375)
Q Consensus 6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 85 (375)
...|.++.++++++|+...+..|...+ +.++..... -.+++.+++.++...... . ...+...+...+..|+++..
T Consensus 146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~-~~~~~~~~~-~~~~~~~~l~~~~~~~~~-~--~~~~~~~~~~~l~lgv~~t~ 220 (293)
T PRK10532 146 DLTGAALALGAGACWAIYILSGQRAGA-EHGPATVAI-GSLIAALIFVPIGALQAG-E--ALWHWSILPLGLAVAILSTA 220 (293)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHH-HHHHHHHHHHHHHHHccC-c--ccCCHHHHHHHHHHHHHHHH
Confidence 356899999999999999999998854 477777644 445666666666554332 1 23455666667789999889
Q ss_pred HHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 86 INQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 86 ~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
+++.+|++++++.+++.++++.+++|++..++++++++|+++.. +++|..+.+.|++....
T Consensus 221 ~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 221 LPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999 99999999999998874
No 39
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.13 E-value=2.2e-09 Score=99.30 Aligned_cols=138 Identities=15% Similarity=0.122 Sum_probs=116.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH
Q 017191 6 DYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVT 85 (375)
Q Consensus 6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 85 (375)
...|.++.++++++|+......|... . -++....++++.++.+.+.++......... ...+.+.|..++..++++..
T Consensus 148 ~~~G~l~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~i~~s~ 224 (292)
T PRK11272 148 NPWGAILILIASASWAFGSVWSSRLP-L-PVGMMAGAAEMLAAGVVLLIASLLSGERLT-ALPTLSGFLALGYLAVFGSI 224 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcC-C-CcchHHHHHHHHHHHHHHHHHHHHcCCccc-ccCCHHHHHHHHHHHHHHHH
Confidence 35799999999999999999999863 2 345666778888888887777654433221 12356788888999999888
Q ss_pred HHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 86 INQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 86 ~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
+++.+|++++++.+++.++++..+.|++++++++++++|++++. +++|..+.+.|+.+...
T Consensus 225 ~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 225 IAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999 99999999999998864
No 40
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.12 E-value=3.5e-10 Score=93.86 Aligned_cols=218 Identities=17% Similarity=0.104 Sum_probs=160.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCC
Q 017191 77 FFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGP 156 (375)
Q Consensus 77 ~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~ 156 (375)
....++. .+.+..|..+++..+++.++.+..-.-.|+.+++++++|+|+... ++++.++++.|++++...+
T Consensus 57 aPF~i~W-t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay~D-- 127 (290)
T KOG4314|consen 57 APFSIFW-TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAYAD-- 127 (290)
T ss_pred cceEEEE-ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEecc--
Confidence 3344455 788999999999999999999999999999999999999999999 9999999999999987421
Q ss_pred cccCcCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHH----HHHH-HHHh
Q 017191 157 KLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATL----QSAT-FAIF 231 (375)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i----~~~~-~~~~ 231 (375)
........|+.+++.+++..|+|-++.|....+.+ --....++..+|.. ...+ +.+.
T Consensus 128 -----------------N~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn-~Gdaa~FmS~LGF~NL~~~~~~~lIL~ 189 (290)
T KOG4314|consen 128 -----------------NEHADEIIGIACAVGSAFMAALYKVLFKMFIGNAN-FGDAAHFMSCLGFFNLCFISFPALILA 189 (290)
T ss_pred -----------------chhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCc-chhHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 11223468999999999999999999998765542 22222222222222 1111 1122
Q ss_pred cCCCCcccccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHH
Q 017191 232 TEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGV 311 (375)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~li 311 (375)
.+ ....|+......|..++..+.+.. .-.++.+.++....|...|+-+.+..+-....+.++-+-..+...+.|.+++
T Consensus 190 ~T-~VE~~qsFA~~PWG~l~G~A~L~l-AFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI 267 (290)
T KOG4314|consen 190 FT-GVEHLQSFAAAPWGCLCGAAGLSL-AFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCII 267 (290)
T ss_pred Hh-chHHHHHHhhCCchhhhhHHHHHH-HHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 222343333446667666665433 3345667888899999999999999999999999887767899999999999
Q ss_pred Hhhhhheeeccc
Q 017191 312 ILGLYAVLWGKA 323 (375)
Q Consensus 312 l~g~~l~~~~~~ 323 (375)
+.|.++......
T Consensus 268 ~i~FiLiiiP~d 279 (290)
T KOG4314|consen 268 CIGFILIIIPED 279 (290)
T ss_pred HHhHHheecccc
Confidence 999988876544
No 41
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.12 E-value=1.2e-09 Score=91.01 Aligned_cols=138 Identities=16% Similarity=0.165 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh------CCcHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc---c------cchh
Q 017191 182 GCLFLFASACCWSLWLILQVPVSAS------YPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNL---H------SSLE 246 (375)
Q Consensus 182 G~~~~l~a~~~~a~~~v~~k~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~------~~~~ 246 (375)
|.++++.+.++.+++.++.|+..++ ..++.....+....+.+.+.+..+..|........ . ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 6788999999999999999998776 22899999999999999999998887654311110 0 2234
Q ss_pred hHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheee
Q 017191 247 IFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLW 320 (375)
Q Consensus 247 ~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~ 320 (375)
+..++..|+ ...+.....+..+++.+|...++...+..+...++|++++||+++..+++|.++.++|.+++.|
T Consensus 81 ~~~~~~~~~-~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGL-LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 444455555 5566677788999999999999999999999999999999999999999999999999998764
No 42
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.12 E-value=9.7e-10 Score=101.83 Aligned_cols=139 Identities=12% Similarity=0.150 Sum_probs=110.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccc--cccchhhHHHHhhhh
Q 017191 178 NWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWN--LHSSLEIFCCFFSGA 255 (375)
Q Consensus 178 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~ 255 (375)
+...|..++++++++|+...+..|.. .+. ++.+..++++..+.+.+.+...... +..... ..+...+ .....+.
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~-~~~~~~~~R~~~a~~~l~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~ 80 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYV-PADEILTHRVIWSFFFMVVLMSICR-QWSYLKTLIQTPQKI-FMLAVSA 80 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cCC-CHHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHcCHHHH-HHHHHHH
Confidence 34679999999999999999999865 566 6999999999999887776655432 111100 0112222 2233555
Q ss_pred hhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheee
Q 017191 256 IGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLW 320 (375)
Q Consensus 256 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~ 320 (375)
++.++.+.++++++++.+++.++++.++.|+++.++++++++|+++..+++|+++.++|+.+...
T Consensus 81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~ 145 (296)
T PRK15430 81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW 145 (296)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 67788899999999999999999999999999999999999999999999999999999888653
No 43
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.07 E-value=2.3e-09 Score=98.62 Aligned_cols=134 Identities=14% Similarity=0.176 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhHhH
Q 017191 183 CLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSF 262 (375)
Q Consensus 183 ~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 262 (375)
.++.++++++||...+..|+..++. ++. .++.+..+.+.+.++...... ...|..... .++..+..+.++....+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~-~~~--~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKE-PDF--LWWALLAHSVLLTPYGLWYLA-QVGWSRLPA-TFWLLLAISAVANMVYF 77 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCch-hHH--HHHHHHHHHHHHHHHHHHhcc-cCCCCCcch-hhHHHHHHHHHHHHHHH
Confidence 4677899999999999999877765 343 355555566666666554211 123333222 33334444555788889
Q ss_pred HHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeec
Q 017191 263 CVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWG 321 (375)
Q Consensus 263 ~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~ 321 (375)
.++++++++.+++.++++.+++|+++.+++++++||+++..+++|++++++|+++....
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~ 136 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS 136 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999887653
No 44
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.06 E-value=1.5e-10 Score=100.77 Aligned_cols=274 Identities=16% Similarity=0.111 Sum_probs=192.9
Q ss_pred HHHHHHHHC---CC-ChHHHHHHHHHHHHHHHHHHHHHhhcccc-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 017191 25 LSTRAALLQ---GM-NPRVFVVYRQAIATLFMAPMAYLSSRKYK-----SSSMGLRSFSLIFFIALLGVTINQNTYFEGL 95 (375)
Q Consensus 25 ~~~k~~~~~---~~-~p~~~~~~r~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al 95 (375)
+..|+.++. .. .|..+++.++++...+...+.....+-.. ..+++.+....+...++.. .+...+-++++
T Consensus 45 f~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL 123 (347)
T KOG1442|consen 45 FLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCL 123 (347)
T ss_pred hhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceeh
Confidence 345666542 12 37888888888877666655433222111 1235566667777777777 67777888999
Q ss_pred cccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccccccccCCC
Q 017191 96 YLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSG 175 (375)
Q Consensus 96 ~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (375)
+|.+++...+=..+.-+|+++++++++|+|-+.. -..+..+.+.|-.+=+ +.+ +..
T Consensus 124 ~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~------~~~~C~lIi~GF~lGv---dqE---------------~~~ 179 (347)
T KOG1442|consen 124 KYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFF------ALGCCLLIILGFGLGV---DQE---------------GST 179 (347)
T ss_pred hhcceEEEEeccchhhhHHHHhHHhhcccccccc------cceeehhheehheecc---ccc---------------ccc
Confidence 9999999999999999999999999999999987 5555555555443332 111 122
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCcc-cc---cccchhhHHH
Q 017191 176 GENWLLGCLFLFASACCWSLWLILQVPVSASYPD-HLSLSAWMCFLATLQSATFAIFTEPDPEA-WN---LHSSLEIFCC 250 (375)
Q Consensus 176 ~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~---~~~~~~~~~~ 250 (375)
+...+.|.++.+.++++-|+..+..|+......| -..++++....+.++..|...+. ++.+. +. .+....|..+
T Consensus 180 ~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~ln-ge~~~v~~~~~l~a~~Fw~~m 258 (347)
T KOG1442|consen 180 GTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILN-GEFQAVVGFPHLPAIKFWILM 258 (347)
T ss_pred CccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHc-chHHHHcCcccchHHHHHHHH
Confidence 3445789999999999999999999976554433 45667777888877777777654 33321 11 1233455555
Q ss_pred HhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccccc
Q 017191 251 FFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKD 325 (375)
Q Consensus 251 ~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~~ 325 (375)
...|+++-.++| .-.+=+|.++|..-.+-....-..-.++++.+++|.-+..-|-|-++++.|-..+++.|.++
T Consensus 259 tLsglfgF~mgy-vTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~e 332 (347)
T KOG1442|consen 259 TLSGLFGFAMGY-VTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHE 332 (347)
T ss_pred HHHHHHHHHhhh-eeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHH
Confidence 555554443333 22344888999988888888889999999999999999999999999999999998876543
No 45
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.04 E-value=2.5e-09 Score=96.97 Aligned_cols=137 Identities=10% Similarity=0.101 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCC---cccccccchh-hHHHHhhhhh
Q 017191 181 LGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDP---EAWNLHSSLE-IFCCFFSGAI 256 (375)
Q Consensus 181 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~g~~ 256 (375)
.|..+.++++++|+...+..|. ..+. ++.+..+++++.+.+.+.+......+.. ..++...... +..+...|+
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~- 78 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL- 78 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH-
Confidence 4888999999999999999997 4456 6999999999999887766554332110 1111111222 333444555
Q ss_pred hhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheee
Q 017191 257 GSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLW 320 (375)
Q Consensus 257 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~ 320 (375)
..++.+.+++++++++++..++.+.++.|+++.++++++++|+++..+++|.++.++|+.+...
T Consensus 79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~ 142 (256)
T TIGR00688 79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV 142 (256)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 4778889999999999999999999999999999999999999999999999999999887643
No 46
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.04 E-value=9.4e-09 Score=89.60 Aligned_cols=274 Identities=12% Similarity=0.089 Sum_probs=190.2
Q ss_pred HHHHHHHHHH-CCCCh--HHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 017191 23 VALSTRAALL-QGMNP--RVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLAS 99 (375)
Q Consensus 23 ~~~~~k~~~~-~~~~p--~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~ 99 (375)
....-.+..+ +++.| +.+++.++++-..+.+.-+...+.++ +..+ |+....++.+. .....+-+-++.|.+
T Consensus 58 yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~--r~iP---~rtY~~la~~t-~gtmGLsn~SlgYLN 131 (367)
T KOG1582|consen 58 YGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKR--RVIP---WRTYVILAFLT-VGTMGLSNGSLGYLN 131 (367)
T ss_pred HHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccc--eecc---hhHhhhhHhhh-hhccccCcCcccccc
Confidence 3334443333 45665 45566666554443333222222222 2234 44455555555 556666677777776
Q ss_pred hhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccccccccCCCCCch
Q 017191 100 SSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENW 179 (375)
Q Consensus 100 ~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (375)
=..-.++....-+-+.+.+.++-+.|..+. +.++..+...|.++..+.+.. ...+.+
T Consensus 132 YPtQviFKccKliPVmiggifIqGkRY~v~------d~~aA~lm~lGli~FTLADs~-----------------~sPNF~ 188 (367)
T KOG1582|consen 132 YPTQVIFKCCKLIPVMIGGIFIQGKRYGVH------DYIAAMLMSLGLIWFTLADSQ-----------------TSPNFN 188 (367)
T ss_pred CcHHHHHHhhhhhhhhheeeeeccccccHH------HHHHHHHHHHHHHhhhhcccc-----------------cCCCcc
Confidence 555556777777777888888899998888 999999999999998863332 233445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhCC-cHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc---ccchhhHHHHhhhh
Q 017191 180 LLGCLFLFASACCWSLWLILQVPVSASYP-DHLSLSAWMCFLATLQSATFAIFTEPDPEAWNL---HSSLEIFCCFFSGA 255 (375)
Q Consensus 180 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~ 255 (375)
..|.+++-.+-++-|+-.-++++..+..+ +.....++....|...++..+..+.+-...|.. .+.......++...
T Consensus 189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~ 268 (367)
T KOG1582|consen 189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL 268 (367)
T ss_pred eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH
Confidence 68999988888999988888888877655 456667788888888777777766544444532 22223344344443
Q ss_pred hhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeecccccc
Q 017191 256 IGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKDH 326 (375)
Q Consensus 256 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~~~ 326 (375)
.+.++.......++..|+..+..+....--+++++++++|..++|....-|..+++.|+++..+.|+.+.
T Consensus 269 -~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~nk~ 338 (367)
T KOG1582|consen 269 -AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRNKI 338 (367)
T ss_pred -HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCCCC
Confidence 5666666667778999999999999999999999999999999999999999999999999998885443
No 47
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.04 E-value=5.9e-09 Score=96.57 Aligned_cols=133 Identities=13% Similarity=0.141 Sum_probs=105.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHH
Q 017191 7 YKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTI 86 (375)
Q Consensus 7 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 86 (375)
..|.+++++++++|+...+..|... ++.++....+ ....+.+.+........ . ...+...+..++..++.. .+
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~~-~~~~~~~~~~---~~~~~~l~~~~~~~~~~-~-~~~~~~~~~~l~~~~~~t-~~ 227 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKYA-RGKNGITLFF---ILTALALWIKYFLSPQP-A-MVFSLPAIIKLLLAAAAM-GF 227 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcc-CCCCchhHHH---HHHHHHHHHHHHHhcCc-c-ccCCHHHHHHHHHHHHHH-HH
Confidence 4588999999999999999999875 3477765432 22333333333332221 1 235667787777777544 88
Q ss_pred HHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 87 NQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 87 ~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
++.+|++++++.+++.++.+.++.|++..++++++++|+++.. +++|.++.+.|+.+...
T Consensus 228 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 228 GYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHhh
Confidence 9999999999999999999999999999999999999999999 99999999999988864
No 48
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.03 E-value=9.1e-09 Score=97.27 Aligned_cols=137 Identities=9% Similarity=0.055 Sum_probs=105.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHCCCCh-HHHHHHHHHHHHHHHHHHHHHhhcc-cc--CCCCCHHHHHHHHHHHHH
Q 017191 7 YKPAMAMLALQFSYAVVALSTRAALLQGMNP-RVFVVYRQAIATLFMAPMAYLSSRK-YK--SSSMGLRSFSLIFFIALL 82 (375)
Q Consensus 7 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p-~~~~~~r~~~~~~~l~~~~~~~~~~-~~--~~~~~~~~~~~~~~~g~~ 82 (375)
..|..++++++++|+.+.++.|....+ .++ ...+++...++.+.+.+......+. .. ....+.. ...++..+++
T Consensus 188 ~lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~ 265 (358)
T PLN00411 188 LIGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII 265 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH
Confidence 448899999999999999999988665 654 4566677766666665555443321 11 0112222 2223444554
Q ss_pred HHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 83 GVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 83 ~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
. .+++.+|++++++.+++.++++.++.|++++++++++++|++++. +++|.++.+.|++++..
T Consensus 266 t-~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~ 328 (358)
T PLN00411 266 T-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMW 328 (358)
T ss_pred H-HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHh
Confidence 4 678999999999999999999999999999999999999999999 99999999999999875
No 49
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.98 E-value=1.9e-08 Score=92.70 Aligned_cols=278 Identities=15% Similarity=0.158 Sum_probs=156.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHH-HHHHHHHHHHH
Q 017191 5 RDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRS-FSLIFFIALLG 83 (375)
Q Consensus 5 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~ 83 (375)
+...|.++.+.++++-+....+.|....+ .+. ...+.....++. ....++.|...
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~-----------------------~~~~~~~~~~~~l~~~~W~~G~~~ 59 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR-----------------------GSLRAGSGGRSYLRRPLWWIGLLL 59 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc-----------------------ccccccchhhHHHhhHHHHHHHHH
Confidence 45679999999999999999888877533 110 000000001111 12345555666
Q ss_pred HHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCC
Q 017191 84 VTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEF 163 (375)
Q Consensus 84 ~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~ 163 (375)
..++..+.+.|+.+.|++.++.+..+.-++.++++..++|||++++ ++.|..+++.|..++.... |+..+..
T Consensus 60 ~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~~~-~~~~~~~- 131 (300)
T PF05653_consen 60 MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVIFA-PKEEPIH- 131 (300)
T ss_pred HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEEeC-CCCCCcC-
Confidence 6778888999999999999999999999999999999999999999 9999999999998877543 3211110
Q ss_pred CccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHH-------HHHHHHhcCCCC
Q 017191 164 LPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQ-------SATFAIFTEPDP 236 (375)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~-------~~~~~~~~~~~~ 236 (375)
..++-.. .-.+............ ++..+.....+|..++ +...........|+.. ...+....+++
T Consensus 132 t~~~l~~---~~~~~~fl~y~~~~~~-~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~- 204 (300)
T PF05653_consen 132 TLDELIA---LLSQPGFLVYFILVLV-LILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILIKLTFSGD- 204 (300)
T ss_pred CHHHHHH---HhcCcceehhHHHHHH-HHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHHHHHhcCc-
Confidence 0000000 0000001111111111 1222222222222222 1110000011111110 00111111111
Q ss_pred cccccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhH-HHHHHHHHHHHHhccc--ccc----hhhhhHH
Q 017191 237 EAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPL-CTVIVTILAALLLHEE--IYT----GSLVGAI 309 (375)
Q Consensus 237 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~-~pv~~~~~~~l~~~e~--~~~----~~~iG~~ 309 (375)
.....+..|..++.+ +.+........++++++.+++.+.++.+. -...+++-|.++++|. .+. ....|..
T Consensus 205 --~~f~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~ 281 (300)
T PF05653_consen 205 --NQFTYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFL 281 (300)
T ss_pred --hhhhhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHH
Confidence 111233344444333 33556667778999999999988876554 4556666678888874 344 3346888
Q ss_pred HHHhhhhheeecccc
Q 017191 310 GVILGLYAVLWGKAK 324 (375)
Q Consensus 310 lil~g~~l~~~~~~~ 324 (375)
+++.|+++....|.+
T Consensus 282 ~ii~GV~lL~~~~~~ 296 (300)
T PF05653_consen 282 IIIIGVFLLSSSKDK 296 (300)
T ss_pred HHHHhhheeeccCch
Confidence 899999988765543
No 50
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.94 E-value=1.5e-08 Score=81.18 Aligned_cols=123 Identities=18% Similarity=0.125 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhH
Q 017191 181 LGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGV 260 (375)
Q Consensus 181 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 260 (375)
.|.++++.+.++-+...++.|+-.++.+ ....... . + ...... . .+ ...+++|++++++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~~~-~----~-~~~~~~-~----------~p---~~~i~lgl~~~~l 60 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLP-LLSHAWD-F----I-AALLAF-G----------LA---LRAVLLGLAGYAL 60 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCC-CccchhH-H----H-HHHHHH-h----------cc---HHHHHHHHHHHHH
Confidence 3778889999999999999999887763 2221111 0 0 000111 0 01 1245678889999
Q ss_pred hHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHH--HhcccccchhhhhHHHHHhhhhheeecccc
Q 017191 261 SFCVQAWCISKRGPLFSAMFNPLCTVIVTILAAL--LLHEEIYTGSLVGAIGVILGLYAVLWGKAK 324 (375)
Q Consensus 261 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l--~~~e~~~~~~~iG~~lil~g~~l~~~~~~~ 324 (375)
++.+|.+++++.+.+.+..+....+++..+.++. ++||++|+.+++|+++|++|+++..+.+++
T Consensus 61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~ 126 (129)
T PRK02971 61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK 126 (129)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999999999999999999999998888888885 899999999999999999999998765443
No 51
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.89 E-value=7.3e-08 Score=89.45 Aligned_cols=140 Identities=14% Similarity=0.199 Sum_probs=108.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHCCCCh--HHHHHHHHHHHHHHHHHHHHHhhcccc----CCCCCHHHHHHHHHHH
Q 017191 7 YKPAMAMLALQFSYAVVALSTRAALLQGMNP--RVFVVYRQAIATLFMAPMAYLSSRKYK----SSSMGLRSFSLIFFIA 80 (375)
Q Consensus 7 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p--~~~~~~r~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~g 80 (375)
..|.+++++++++|+...+..|...+++-++ ....++-.+.+.+.+.......+.... ....+.+.+..++..+
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 221 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA 221 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence 4699999999999999999999875331122 233344444444333333222222110 0234678899999999
Q ss_pred HHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 81 LLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 81 ~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
++...+++.+|+.++++.+++.++.+..+.|++..++++++++|+++.. +++|.++.+.|+++...
T Consensus 222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~------~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL------QFLGAVLIMAGLYINVF 287 (299)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHHHhc
Confidence 9998999999999999999999999999999999999999999999999 99999999999988763
No 52
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.86 E-value=2.8e-08 Score=88.07 Aligned_cols=203 Identities=8% Similarity=0.022 Sum_probs=126.9
Q ss_pred hhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcc-----------cCcCCCccccc
Q 017191 101 SMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKL-----------LNTEFLPEKSF 169 (375)
Q Consensus 101 ~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~-----------~~~~~~~~~~~ 169 (375)
.....+.+..++++++..+.+.++|.++. ++++.++...|++.....+.+.. ...+...
T Consensus 5 Pa~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~---- 74 (222)
T TIGR00803 5 PIHIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSS---- 74 (222)
T ss_pred cchHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCC----
Confidence 34456677889999999998899998888 99999998888876443221110 0000000
Q ss_pred cccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHH-HHHHHHHHHHHHHHHHHhcCCCC-cccc--cccch
Q 017191 170 LFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSL-SAWMCFLATLQSATFAIFTEPDP-EAWN--LHSSL 245 (375)
Q Consensus 170 ~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~-~~~~--~~~~~ 245 (375)
...........|....+.+.++-++..+++++..++.+..... +.....++.+.........+.+. ..+. ...+.
T Consensus 75 -~~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (222)
T TIGR00803 75 -AKTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPT 153 (222)
T ss_pred -ccccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCch
Confidence 0001112446777778888888888888888876654212222 12222222221111111111111 0111 01111
Q ss_pred hhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhhe
Q 017191 246 EIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAV 318 (375)
Q Consensus 246 ~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~ 318 (375)
..+. .++...++..+..+.+|+.++...+....++++++.+++++++||+++..+++|+.+++.|++++
T Consensus 154 ~~~~----~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 154 AVWI----VGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHH----HHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 1112 22345566677889999999999999999999999999999999999999999999999998753
No 53
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.81 E-value=4.6e-08 Score=90.96 Aligned_cols=141 Identities=11% Similarity=0.171 Sum_probs=108.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHC-CCChHHHHHHHHHHHHHHHHHHHHHhhccccCC-C-------CCHHH-HHH
Q 017191 6 DYKPAMAMLALQFSYAVVALSTRAALLQ-GMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSS-S-------MGLRS-FSL 75 (375)
Q Consensus 6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~-~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~-~-------~~~~~-~~~ 75 (375)
...|.++.++++++|+...+..|...++ +.+|...+++....+.+.+.|+....+.....+ . ..... +..
T Consensus 143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (302)
T TIGR00817 143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV 222 (302)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence 4569999999999999999999988651 489999999999999999998876543211000 0 01011 111
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 76 IFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 76 ~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
.+..+.......+.+++.++++++++.+++...+.|+++.++++++++|+++.. +++|..+.+.|+.+...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------QVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------HHHHHHHHHHHHHHHHH
Confidence 223333232344467778999999999999999999999999999999999999 99999999999999874
No 54
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=98.79 E-value=1.9e-08 Score=87.97 Aligned_cols=237 Identities=13% Similarity=0.052 Sum_probs=158.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccc-chhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHh
Q 017191 66 SSMGLRSFSLIFFIALLGVTINQNTYFEGLYLA-SSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCV 144 (375)
Q Consensus 66 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~-~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~ 144 (375)
++.+.|++.... . .....+.+-++++++- +...=.++..-.++.++++++++.|+|.+.+ |+.++.+.-
T Consensus 60 ~kiplk~Y~i~V---~-mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~------Qy~Sv~~iT 129 (330)
T KOG1583|consen 60 PKIPLKDYAITV---A-MFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLR------QYSSVLMIT 129 (330)
T ss_pred CCCchhhhheeh---h-eeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehh------hhhhHHhhh
Confidence 556666654332 2 2256777788888876 4445556678899999999999999999999 999999999
Q ss_pred hhHhHHhhhcCCcccC-cCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-cHHHHHHHHHHHHH
Q 017191 145 GGAISMALLRGPKLLN-TEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYP-DHLSLSAWMCFLAT 222 (375)
Q Consensus 145 ~Gv~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~ 222 (375)
+|+++..+.+.+.... .+..+ .++...+...|..|+.+...+.+.-|...+.++..-+++. ++-+..++.-.++.
T Consensus 130 iGiiIcTl~s~~d~~~~~~~l~---~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsL 206 (330)
T KOG1583|consen 130 IGIIICTLFSSKDGRSKLSGLD---SGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSL 206 (330)
T ss_pred hhheeEEeecCcchhhhhcccc---cCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhcc
Confidence 9999988654443332 11111 1111233445789999988899988888888887766654 56677777666543
Q ss_pred HHHHHHHHhcCCC------------Cccccc---ccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHH
Q 017191 223 LQSATFAIFTEPD------------PEAWNL---HSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVI 287 (375)
Q Consensus 223 i~~~~~~~~~~~~------------~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~ 287 (375)
- ..++...+ ....+. .-+..|..+++-.+ ....+.-..+..-...++..+++...+.-.+
T Consensus 207 P----~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L-~Qy~CikgVy~L~te~~sLTVTlvltlRKFv 281 (330)
T KOG1583|consen 207 P----LFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVL-TQYFCIKGVYILTTETSSLTVTLVLTLRKFV 281 (330)
T ss_pred c----hHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHH-HHHHHHHhhhhhhceecceEEEEeeeHHHHH
Confidence 2 22222111 000111 12334444443333 2222222233345566777889999999999
Q ss_pred HHHHHHHHhcccccchhhhhHHHHHhhhhheee
Q 017191 288 VTILAALLLHEEIYTGSLVGAIGVILGLYAVLW 320 (375)
Q Consensus 288 ~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~ 320 (375)
+.++|.+.|+..++++.|+|.+++..|.+++..
T Consensus 282 SLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 282 SLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred HHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888743
No 55
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.79 E-value=2.4e-08 Score=78.65 Aligned_cols=108 Identities=12% Similarity=0.269 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHH
Q 017191 216 WMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALL 295 (375)
Q Consensus 216 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~ 295 (375)
++...+.+..........+-...++......+..++..|+++...++.++.++.++.+ ..++.+..++|+++.+++.++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555544322111122222345556666677667789999999999999 588899999999999999999
Q ss_pred hcccccchhhhhHHHHHhhhhheeecccc
Q 017191 296 LHEEIYTGSLVGAIGVILGLYAVLWGKAK 324 (375)
Q Consensus 296 ~~e~~~~~~~iG~~lil~g~~l~~~~~~~ 324 (375)
++|+++..+++|++++++|+++..+.+.+
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999998876543
No 56
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.78 E-value=1.4e-09 Score=93.61 Aligned_cols=278 Identities=16% Similarity=0.146 Sum_probs=187.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017191 9 PAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQ 88 (375)
Q Consensus 9 g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 88 (375)
.++.+++-++.||+.+.+.... +-.|.+.+.-- .++++++....++..+ |..+.+.+..-++.|.+. ..++
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGt-T~GALifaiiv~~~~~----p~~T~~~~iv~~isG~~W-s~GQ 73 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGT-TLGALIFAIIVFLFVS----PELTLTIFIVGFISGAFW-SFGQ 73 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec---CCChhHhhhhc-cHHHHHHHHHHheeec----CccchhhHHHHHHhhhHh-hhhh
Confidence 5778899999999998887644 35676665543 3444444444444433 567888888888889888 8999
Q ss_pred HHHHhhhcccchhhHhhhh-hhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccc
Q 017191 89 NTYFEGLYLASSSMASAMG-NLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEK 167 (375)
Q Consensus 89 ~~~~~al~~~~~~~a~~l~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~ 167 (375)
...+.|+++.+++.+..+. .++-+-+.+++++.++|..+.. .-....+++++.++|+.+....+.. ++.
T Consensus 74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~--~~IlG~iAliliviG~~lTs~~~~~--nk~------ 143 (288)
T COG4975 74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPT--QIILGFIALILIVIGIYLTSKQDRN--NKE------ 143 (288)
T ss_pred hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcch--hHHHHHHHHHHHHHhheEeeeeccc--ccc------
Confidence 9999999999999999995 6999999999999999998877 1111224455555666655531111 000
Q ss_pred cccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhh
Q 017191 168 SFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEI 247 (375)
Q Consensus 168 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 247 (375)
.++.++.-.|....+.+.+.|-.|.++.+... . |..+...-+..-..+....+....+ +. .. ....|
T Consensus 144 -----~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v-~g~saiLPqAiGMv~~ali~~~~~~-~~-~~---~K~t~ 210 (288)
T COG4975 144 -----EENPSNLKKGIVILLISTLGYVGYVVLFQLFD--V-DGLSAILPQAIGMVIGALILGFFKM-EK-RF---NKYTW 210 (288)
T ss_pred -----ccChHhhhhheeeeeeeccceeeeEeeecccc--c-cchhhhhHHHHHHHHHHHHHhhccc-cc-ch---HHHHH
Confidence 13444567899899999999999999888654 3 3344433333322222222222211 11 11 11222
Q ss_pred HHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhh----hhHHHHHhhhhheee
Q 017191 248 FCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSL----VGAIGVILGLYAVLW 320 (375)
Q Consensus 248 ~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~----iG~~lil~g~~l~~~ 320 (375)
.. +..|+ .=+++...+.++.++.|.+..=.+..+..+++.+-+.++++|+=|..++ +|+++++.|..+.-.
T Consensus 211 ~n-ii~G~-~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~ 285 (288)
T COG4975 211 LN-IIPGL-IWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI 285 (288)
T ss_pred HH-HhhHH-HHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence 22 23344 3456777788888888888777788888999999999999999888765 688888888776544
No 57
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.78 E-value=2.1e-07 Score=77.29 Aligned_cols=135 Identities=21% Similarity=0.242 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC------CCChHHHHHHHHHHHHHHHHHHHHHhhccccCC-----CC-----CHHH
Q 017191 9 PAMAMLALQFSYAVVALSTRAALLQ------GMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSS-----SM-----GLRS 72 (375)
Q Consensus 9 g~l~~l~~~~~~~~~~~~~k~~~~~------~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~-----~~-----~~~~ 72 (375)
|.++++.+.++.+...+..|..+++ +.++..+..+....+.+++.+.....+.....+ .. ..+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 5678999999999999999998876 689999999999999999999887766543100 00 2345
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHH
Q 017191 73 FSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISM 150 (375)
Q Consensus 73 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~ 150 (375)
+..++..|++. ...+.+.+..++++++...++......+++.++++++++|+++.. +++|+.+++.|+++-
T Consensus 81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhee
Confidence 66666777777 889999999999999999999999999999999999999999999 999999999998753
No 58
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.65 E-value=1.2e-06 Score=83.15 Aligned_cols=140 Identities=11% Similarity=0.120 Sum_probs=102.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHC------CCChHHHHHHHHHHHHHHHHHHHHHhhccc-cC---------CCCC
Q 017191 6 DYKPAMAMLALQFSYAVVALSTRAALLQ------GMNPRVFVVYRQAIATLFMAPMAYLSSRKY-KS---------SSMG 69 (375)
Q Consensus 6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~------~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~-~~---------~~~~ 69 (375)
...|.+++++++++|+...++.|..+++ ..++.....+-..++.++++|+....+... .. ....
T Consensus 192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~ 271 (350)
T PTZ00343 192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYT 271 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence 4579999999999999999999998753 255666666667888888888876432210 00 0001
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhH
Q 017191 70 LRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAIS 149 (375)
Q Consensus 70 ~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 149 (375)
.......++.+.+...+.+.+.+++++++++...++...+.|+++.++++++++|+++.. +++|.++.+.|+++
T Consensus 272 ~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~------~~iG~~lii~Gv~l 345 (350)
T PTZ00343 272 KGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL------GYLGMAVAILGALL 345 (350)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH------hHHHHHHHHHHHHH
Confidence 111111222222222444444557999999999999999999999999999999999999 99999999999988
Q ss_pred Hh
Q 017191 150 MA 151 (375)
Q Consensus 150 ~~ 151 (375)
..
T Consensus 346 Ys 347 (350)
T PTZ00343 346 YS 347 (350)
T ss_pred Hh
Confidence 65
No 59
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.56 E-value=2.6e-06 Score=78.17 Aligned_cols=134 Identities=15% Similarity=0.239 Sum_probs=107.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHH-HHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH
Q 017191 7 YKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVV-YRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVT 85 (375)
Q Consensus 7 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~-~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 85 (375)
..|.++.+++++.|+...+..|... ..++..... +..........+.. ..... .....+.+......|++...
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~g~~~~~ 226 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLLFF--LSGFG--APILSRAWLLLLYLGVFSTG 226 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHH--hcccc--ccCCHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999775 366766666 33332222222221 11111 13467889999999999966
Q ss_pred HHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 86 INQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 86 ~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
.++.+++++++..+++.++.+..+.|++..++++++++|+++.. +++|..+.+.|+.+...
T Consensus 227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~------~~~G~~li~~g~~l~~~ 287 (292)
T COG0697 227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA------QLLGAALVVLGVLLASL 287 (292)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHhc
Confidence 89999999999999999999999999999999999999999999 99999999999988873
No 60
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.55 E-value=1.9e-06 Score=79.47 Aligned_cols=129 Identities=15% Similarity=0.106 Sum_probs=103.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHH---HHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHH
Q 017191 7 YKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQA---IATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLG 83 (375)
Q Consensus 7 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 83 (375)
.+|+++.+++++.++......|.. +.+|...++.... ++..++.... + +. + +. ..+.....++.|++.
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~--~-~~-~-~~-~~~~~~~~~~~Gi~~ 221 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH--I-LA-K-PL-KKYAILLNILPGLMW 221 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH--h-cc-c-ch-HHHHHHHHHHHHHHH
Confidence 689999999999999999999965 3888888555544 3333333222 1 11 1 32 334445556688885
Q ss_pred HHHHHHHHHhhhc-ccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhh----hhHHHHhhhHhHHh
Q 017191 84 VTINQNTYFEGLY-LASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKI----LGTIFCVGGAISMA 151 (375)
Q Consensus 84 ~~~~~~~~~~al~-~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~----~g~~l~~~Gv~l~~ 151 (375)
.+++.+|+.+.+ +.+++.++++.+..|+...+++++++||+.+++ ++ +|.++.+.|+.++.
T Consensus 222 -~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 222 -GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILG 287 (290)
T ss_pred -HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHh
Confidence 999999999999 999999999999999999999999999999999 99 99999999998875
No 61
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.53 E-value=2e-06 Score=67.10 Aligned_cols=69 Identities=17% Similarity=0.132 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHh
Q 017191 77 FFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMA 151 (375)
Q Consensus 77 ~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 151 (375)
...+++++.+++.++..+++..|.+.+..+.++.++++.+++++++|||++++ +++|+.+.+.|++++.
T Consensus 40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence 34444666889999999999999999999999999999999999999999999 9999999999998875
No 62
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.52 E-value=4.4e-07 Score=70.88 Aligned_cols=67 Identities=18% Similarity=0.105 Sum_probs=61.8
Q ss_pred hhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhhee
Q 017191 253 SGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVL 319 (375)
Q Consensus 253 ~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~ 319 (375)
.++++.++++.++.+++++.+.+++-.+.++.++++.+.+++++||+++..+++|.+++++|+++..
T Consensus 42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4445778899999999999999999999999999999999999999999999999999999988754
No 63
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.47 E-value=3.7e-06 Score=67.34 Aligned_cols=118 Identities=19% Similarity=0.108 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHH
Q 017191 8 KPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTIN 87 (375)
Q Consensus 8 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 87 (375)
.++++++++.++-+...++.|..+++ .+....... . ...+. .. . .....+..|++.++++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~-~~~~~--~~-------~--------~p~~~i~lgl~~~~la 61 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-F-IAALL--AF-------G--------LALRAVLLGLAGYALS 61 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-H-HHHHH--HH-------h--------ccHHHHHHHHHHHHHH
Confidence 37888899999999999999999765 444332211 1 00000 00 0 0112577888888999
Q ss_pred HHHHHhhhcccchhhHhhhhhhhHHHHHHHHHH--hhccccCCCccchhhhhhhHHHHhhhHhHHh
Q 017191 88 QNTYFEGLYLASSSMASAMGNLIPAITFVMASI--VGLEKIDLGSVRSVAKILGTIFCVGGAISMA 151 (375)
Q Consensus 88 ~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l--~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 151 (375)
+.++.+++++.+++.+..+....++++.+.++. +++|++++. +++|+.+.++|+.++.
T Consensus 62 ~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 62 MLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhc
Confidence 999999999999999999999999888888885 799999999 9999999999999987
No 64
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.43 E-value=1.9e-06 Score=76.72 Aligned_cols=139 Identities=12% Similarity=0.126 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccc-cccchhhHHHHhhhhhhh
Q 017191 180 LLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWN-LHSSLEIFCCFFSGAIGS 258 (375)
Q Consensus 180 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~ 258 (375)
..|.++++.+-+.|+..-.+.|-+ +.. ++..+..++...+......+.....+....++ ...+..+..+...++ -.
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~-~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~-li 82 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLL-EPL-PATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTAL-LI 82 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHH-ccC-CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHH-HH
Confidence 469999999999999999998854 555 58899999999988877766665533322222 234556666666666 46
Q ss_pred hHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeec
Q 017191 259 GVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWG 321 (375)
Q Consensus 259 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~ 321 (375)
....++|.++.++....++|.-.+.+|.+.+++|.++++|+++..|++..++..+|+....+.
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 688999999999999999999999999999999999999999999999999999998887653
No 65
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.31 E-value=1.5e-05 Score=74.23 Aligned_cols=142 Identities=12% Similarity=-0.053 Sum_probs=112.5
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhcccc-CCCCCHHHHHHHHHHHHH
Q 017191 4 LRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYK-SSSMGLRSFSLIFFIALL 82 (375)
Q Consensus 4 ~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~ 82 (375)
.+..+|-++++++++++|.+.++-+..+.+ .++.++..+-.+.+.++..+.....+++.. ....+.+.....+..++.
T Consensus 164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~ 242 (334)
T PF06027_consen 164 SNPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALC 242 (334)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHH
Confidence 356899999999999999999999998855 888888888888888888877766555443 123455555444444444
Q ss_pred HHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhh
Q 017191 83 GVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALL 153 (375)
Q Consensus 83 ~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~ 153 (375)
. ...+.+.-..+++.+++...+=.-+..++..+++.+++++++++. .++|.++.++|.++....
T Consensus 243 l-f~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l------y~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 243 L-FLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL------YILAFALIIIGFVVYNLA 306 (334)
T ss_pred H-HHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH------HHHHHHHHHHHhheEEcc
Confidence 4 556666677888999987777778889999999999999999999 999999999999998753
No 66
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.25 E-value=1.9e-05 Score=68.74 Aligned_cols=134 Identities=14% Similarity=0.070 Sum_probs=114.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHH
Q 017191 5 RDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGV 84 (375)
Q Consensus 5 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 84 (375)
-+..|..+.+.+..+|+.+.+..|..-. ..+--.-+..-+.++.++.+|+....... ...++......+..++++.
T Consensus 145 lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~-~~~g~~g~a~gm~vAaviv~Pig~~~ag~---~l~~p~ll~laLgvavlSS 220 (292)
T COG5006 145 LDPVGVALALGAGACWALYIVLGQRAGR-AEHGTAGVAVGMLVAALIVLPIGAAQAGP---ALFSPSLLPLALGVAVLSS 220 (292)
T ss_pred CCHHHHHHHHHHhHHHHHHHHHcchhcc-cCCCchHHHHHHHHHHHHHhhhhhhhcch---hhcChHHHHHHHHHHHHhc
Confidence 3678999999999999999999998753 35556667788899999999987543322 2346677788888999999
Q ss_pred HHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHh
Q 017191 85 TINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAI 148 (375)
Q Consensus 85 ~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ 148 (375)
.+.+.+--.+++..+...-+++.++.|.+.++.++++++|+++.. ||.++...+.+.+
T Consensus 221 alPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsa 278 (292)
T COG5006 221 ALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASA 278 (292)
T ss_pred ccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 9999988877655
No 67
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.21 E-value=3.2e-06 Score=76.13 Aligned_cols=277 Identities=15% Similarity=0.196 Sum_probs=160.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHH
Q 017191 5 RDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGV 84 (375)
Q Consensus 5 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 84 (375)
+..+|.++.+.+.+.-|.+..+-|....+ ... .-.|-.+. +....++ +.+..|++.+
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r-----------~~~--------~~~ra~~g--g~~yl~~--~~Ww~G~ltm 74 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKR-----------AGA--------SGLRAGEG--GYGYLKE--PLWWAGMLTM 74 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHH-----------Hhh--------hcccccCC--Ccchhhh--HHHHHHHHHH
Confidence 34567777777888888888877766543 100 00011111 1112233 5567788888
Q ss_pred HHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCc-CC
Q 017191 85 TINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNT-EF 163 (375)
Q Consensus 85 ~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~-~~ 163 (375)
.++...-|.|..+.|++.++.+..+..++.++++..+++||+++. ..+|..++++|-.+++.. .|+..+. +.
T Consensus 75 ~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~h-aP~e~~i~t~ 147 (335)
T KOG2922|consen 75 IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVIH-APKEQEIESV 147 (335)
T ss_pred HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEEe-cCcccccccH
Confidence 899999999999999999999999999999999999999999999 999999999998888753 2321111 00
Q ss_pred CccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHH-H----HHH--HhcCCCC
Q 017191 164 LPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQS-A----TFA--IFTEPDP 236 (375)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~-~----~~~--~~~~~~~ 236 (375)
++. . .--.+...+.....++..++.=++.+.-|+ .+. +.+.........|.... . ..+ ....++.
T Consensus 148 ~el--~---~~~~~~~Fliy~~~iil~~~il~~~~~p~~-g~t--nilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ 219 (335)
T KOG2922|consen 148 EEV--W---ELATEPGFLVYVIIIILIVLILIFFYAPRY-GQT--NILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNN 219 (335)
T ss_pred HHH--H---HHhcCccHHHHHHHHHHHHHHHheeecccc-ccc--ceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCc
Confidence 000 0 000000112222222222222222221111 111 22222222222221110 0 011 1111111
Q ss_pred cccccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhh-HHHHHHHHHHHHHhcccc--cc----hhhhhHH
Q 017191 237 EAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNP-LCTVIVTILAALLLHEEI--YT----GSLVGAI 309 (375)
Q Consensus 237 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~-~~pv~~~~~~~l~~~e~~--~~----~~~iG~~ 309 (375)
+...+..|..++.... +...-..-.++|++..+++.++.+.+ .-..++++-|.++|+|-- +. ..+.|..
T Consensus 220 ---ql~~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ 295 (335)
T KOG2922|consen 220 ---QLFYPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFV 295 (335)
T ss_pred ---ccccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHH
Confidence 1223345555444444 44455556789999999998887654 456777788999999843 33 3457888
Q ss_pred HHHhhhhheeeccc
Q 017191 310 GVILGLYAVLWGKA 323 (375)
Q Consensus 310 lil~g~~l~~~~~~ 323 (375)
.++.|+++....|.
T Consensus 296 ti~~G~flL~~~kd 309 (335)
T KOG2922|consen 296 TIFLGIFLLHRTKD 309 (335)
T ss_pred HhhheeeEeeeecc
Confidence 99999998855444
No 68
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=98.11 E-value=7.6e-06 Score=64.31 Aligned_cols=70 Identities=13% Similarity=0.242 Sum_probs=60.0
Q ss_pred hhhhhhHhHHHHHHHhccCCcchhhh-hhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccc
Q 017191 254 GAIGSGVSFCVQAWCISKRGPLFSAM-FNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKA 323 (375)
Q Consensus 254 g~~~~~~~~~~~~~a~~~~~~~~~s~-~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~ 323 (375)
.+++.+++++++.+++|+++...+=. ...+..+.+.+.+++++||++++.+++|++++++|++......+
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~ 106 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR 106 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence 44467889999999999999875544 46789999999999999999999999999999999998865544
No 69
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.89 E-value=0.00034 Score=56.81 Aligned_cols=132 Identities=9% Similarity=0.035 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhHh
Q 017191 182 GCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVS 261 (375)
Q Consensus 182 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 261 (375)
..+++++++++-++......++.++..++...+++.+..+.+.+........+. .+.......|+.. +|-+.+.+.
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~--lGG~lG~~~ 77 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAY--LGGLLGVFF 77 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHh--ccHHHHHHH
Confidence 356788899999999999999888875699999999999999988888776543 2222223344442 344456677
Q ss_pred HHHHHHHhccCCcchhhhh-hhHHHHHHHHHHHH----HhcccccchhhhhHHHHHhhhhh
Q 017191 262 FCVQAWCISKRGPLFSAMF-NPLCTVIVTILAAL----LLHEEIYTGSLVGAIGVILGLYA 317 (375)
Q Consensus 262 ~~~~~~a~~~~~~~~~s~~-~~~~pv~~~~~~~l----~~~e~~~~~~~iG~~lil~g~~l 317 (375)
..+..+..++.|++....+ ..-+.+.+.++|.+ .-++++++.+++|.+++++|+++
T Consensus 78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 7788899999999866664 56677777888885 23467899999999999999864
No 70
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.80 E-value=0.00062 Score=63.28 Aligned_cols=138 Identities=12% Similarity=0.150 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-CCCChHHHHHHHHHHHHHHHHHHHHH--hhcccc---CCCCCHHHHHHHHHHHH
Q 017191 8 KPAMAMLALQFSYAVVALSTRAALL-QGMNPRVFVVYRQAIATLFMAPMAYL--SSRKYK---SSSMGLRSFSLIFFIAL 81 (375)
Q Consensus 8 ~g~l~~l~~~~~~~~~~~~~k~~~~-~~~~p~~~~~~r~~~~~~~l~~~~~~--~~~~~~---~~~~~~~~~~~~~~~g~ 81 (375)
.|+++++++.++-|......+..++ .+.++.+..++-...+.++..+.... .+.... ....++..+..++...+
T Consensus 154 ~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~ 233 (303)
T PF08449_consen 154 LGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL 233 (303)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH
Confidence 3999999999999999999999985 56889999999999998888877665 221111 01123345666677777
Q ss_pred HHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 82 LGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 82 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
.+ ..++.+.+...+..++...+++..+--+++.+++.+++++++++. +|+|+.+.+.|..+-..
T Consensus 234 ~~-~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~------~~~G~~lv~~g~~~~~~ 297 (303)
T PF08449_consen 234 TG-ALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPL------QWIGIVLVFAGIFLYSY 297 (303)
T ss_pred HH-HHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChH------HHHHHHHhHHHHHHHHH
Confidence 77 777778888899999999999999999999999999999999999 99999999999998874
No 71
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.80 E-value=0.00018 Score=55.76 Aligned_cols=69 Identities=13% Similarity=0.168 Sum_probs=58.9
Q ss_pred hhhhhhHhHHHHHHHhccCCcchh-hhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeecc
Q 017191 254 GAIGSGVSFCVQAWCISKRGPLFS-AMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGK 322 (375)
Q Consensus 254 g~~~~~~~~~~~~~a~~~~~~~~~-s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~ 322 (375)
.+++.++++.++..++|+++...+ ++...+..+.+.+.++++++|++++.+++|++++++|++......
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 344677889999999999998754 444678899999999999999999999999999999999986544
No 72
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.78 E-value=0.00015 Score=66.92 Aligned_cols=121 Identities=19% Similarity=0.171 Sum_probs=88.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhh
Q 017191 177 ENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAI 256 (375)
Q Consensus 177 ~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 256 (375)
..+..|..++++++++.+....++|+...+.+ ......-. . .... + ..+..|. |++
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~-~~~~~~~~---~-----~~~~--------l--~~~~W~~-----G~~ 58 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLP-RGSLRAGS---G-----GRSY--------L--RRPLWWI-----GLL 58 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccccccc---h-----hhHH--------H--hhHHHHH-----HHH
Confidence 34678999999999999999999998766642 10000000 0 0000 0 0112222 333
Q ss_pred hhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeec
Q 017191 257 GSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWG 321 (375)
Q Consensus 257 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~ 321 (375)
...++..+...++...+.+.++++..+..++..+++..+++|+++..+++|+++++.|..+....
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~ 123 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF 123 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence 34455567778899999999999999999999999999999999999999999999998876543
No 73
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.74 E-value=0.001 Score=54.14 Aligned_cols=139 Identities=11% Similarity=0.055 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhh
Q 017191 180 LLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSG 259 (375)
Q Consensus 180 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 259 (375)
.+..+.+++++++-.+......++.+..++|...+++.+..|.+.+..+.+..++.. .+.......|+..+. |+ .+.
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~-~~a~~~~~pwW~~~G-G~-lGa 80 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHP-GLAAVASAPWWAWIG-GL-LGA 80 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCC-chhhccCCchHHHHc-cc-hhh
Confidence 456788899999999999999988888877999999999999999888888754432 232223334444222 33 344
Q ss_pred HhHHHHHHHhccCCcc-hhhhhhhHHHHHHHHHHHHHhc----ccccchhhhhHHHHHhhhhheeec
Q 017191 260 VSFCVQAWCISKRGPL-FSAMFNPLCTVIVTILAALLLH----EEIYTGSLVGAIGVILGLYAVLWG 321 (375)
Q Consensus 260 ~~~~~~~~a~~~~~~~-~~s~~~~~~pv~~~~~~~l~~~----e~~~~~~~iG~~lil~g~~l~~~~ 321 (375)
+--+.......+.|++ .......-+.+.+.++|.+=+. .+++..+++|++++++|+++..+.
T Consensus 81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~ 147 (150)
T COG3238 81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF 147 (150)
T ss_pred hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence 4444556677788876 4555677788888888887654 578999999999999996665443
No 74
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.71 E-value=0.00062 Score=61.14 Aligned_cols=116 Identities=17% Similarity=0.059 Sum_probs=88.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHH
Q 017191 5 RDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGV 84 (375)
Q Consensus 5 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 84 (375)
+..++++.++++++.+..+..+.|.. +++|....+=. .++.++-..+.....++ ....|...+-++.|++.
T Consensus 135 ~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPq-aiGm~i~a~i~~~~~~~----~~~~k~~~~nil~G~~w- 205 (269)
T PF06800_consen 135 NMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQ-AIGMLIGAFIFNLFSKK----PFFEKKSWKNILTGLIW- 205 (269)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHH-HHHHHHHHHHHhhcccc----cccccchHHhhHHHHHH-
Confidence 34679999999999999999998864 47887776644 34333333333222221 12334455557788888
Q ss_pred HHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCC
Q 017191 85 TINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLG 129 (375)
Q Consensus 85 ~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~ 129 (375)
..++.+++.+.+..+.+.+-.+..+.+++..+.+.+++||+-+++
T Consensus 206 ~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k 250 (269)
T PF06800_consen 206 GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK 250 (269)
T ss_pred HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence 899999999999999999999999999999999999999998888
No 75
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=97.68 E-value=0.018 Score=53.09 Aligned_cols=302 Identities=13% Similarity=0.076 Sum_probs=180.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHH-Hhhcccc--CCCCCHHHHHHHHHHHHH
Q 017191 6 DYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAY-LSSRKYK--SSSMGLRSFSLIFFIALL 82 (375)
Q Consensus 6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~-~~~~~~~--~~~~~~~~~~~~~~~g~~ 82 (375)
-..|+++..+..++-|+..+-.|.. ++.+-...=....+++.+++=.+.- +.-.... ....+........+.|++
T Consensus 5 ii~Gii~h~iGg~~~~sfy~P~kkv--k~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~l 82 (344)
T PF06379_consen 5 IILGIIFHAIGGFASGSFYVPFKKV--KGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVL 82 (344)
T ss_pred HHHHHHHHHHHHHHhhhhccchhhc--CCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHH
Confidence 4678999999999999999888877 4455544444444555444333221 1111110 122345567777888888
Q ss_pred HHHHHHHHHHhhhcccchhhHhhh-hhhhHHHHHHHHHHhhcccc-CCCccchhhhhhhHHHHhhhHhHHhhhcCCcccC
Q 017191 83 GVTINQNTYFEGLYLASSSMASAM-GNLIPAITFVMASIVGLEKI-DLGSVRSVAKILGTIFCVGGAISMALLRGPKLLN 160 (375)
Q Consensus 83 ~~~~~~~~~~~al~~~~~~~a~~l-~~~~pi~~~ll~~l~~~e~~-~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~ 160 (375)
. .++...|-.+++|++.+...-+ ..+.-++-.++-.++.++-- -..++-+...++|++++++|+++...-+.. +
T Consensus 83 W-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~---K 158 (344)
T PF06379_consen 83 W-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSM---K 158 (344)
T ss_pred H-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHh---h
Confidence 8 8999999999999999877654 56777777777666644310 011233445899999999999999742111 1
Q ss_pred cCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhh--------hhCC---cHHHHHHHHHHHHHHHHHHHH
Q 017191 161 TEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVS--------ASYP---DHLSLSAWMCFLATLQSATFA 229 (375)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~--------~~~~---~~~~~~~~~~~~~~i~~~~~~ 229 (375)
+..+. .+..+.+..+|.++++++++.-|.+++-...-. ...+ .........+.-|.+.-...+
T Consensus 159 e~~~~------~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc 232 (344)
T PF06379_consen 159 EKELG------EEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYC 232 (344)
T ss_pred hhhhc------cchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHH
Confidence 11111 112345567999999999998888877655321 0011 011122233344444444454
Q ss_pred Hhc---CCCCc---cccc---ccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcc----hhhhhhhHHHHHHHHHHHHHh
Q 017191 230 IFT---EPDPE---AWNL---HSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPL----FSAMFNPLCTVIVTILAALLL 296 (375)
Q Consensus 230 ~~~---~~~~~---~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~----~~s~~~~~~pv~~~~~~~l~~ 296 (375)
++. .++.. +... ....++...+..|+ .=...++.|..+-.+.+.. --.+.+.+..+++-+.+.+ +
T Consensus 233 ~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~-lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~-l 310 (344)
T PF06379_consen 233 LILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGV-LWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI-L 310 (344)
T ss_pred HHHHhhcCCCccccccccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH-H
Confidence 432 12221 1111 11234444455555 4556777788887777743 3445678888888888886 4
Q ss_pred ccc------ccchhhhhHHHHHhhhhheeec
Q 017191 297 HEE------IYTGSLVGAIGVILGLYAVLWG 321 (375)
Q Consensus 297 ~e~------~~~~~~iG~~lil~g~~l~~~~ 321 (375)
+|- .-..-++|+++++.++.++-++
T Consensus 311 kEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G 341 (344)
T PF06379_consen 311 KEWKGASKKTIRVLVLGIAVLILSVVIVGYG 341 (344)
T ss_pred HHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence 773 2233467888888887776443
No 76
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.66 E-value=0.00078 Score=52.07 Aligned_cols=65 Identities=17% Similarity=0.170 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHhhhcccchhhHhhh-hhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHh
Q 017191 81 LLGVTINQNTYFEGLYLASSSMASAM-GNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMA 151 (375)
Q Consensus 81 ~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 151 (375)
+.++..++.+...++++.|.+.+-.+ ....-+.+.+++++++||++++. +++|+.+.+.|++.+-
T Consensus 42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhc
Confidence 33447888999999999999988766 46888999999999999999999 9999999999998763
No 77
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.62 E-value=0.00017 Score=54.80 Aligned_cols=66 Identities=20% Similarity=0.297 Sum_probs=58.7
Q ss_pred hhhhHhHHHHHHHhccCCcc-hhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeec
Q 017191 256 IGSGVSFCVQAWCISKRGPL-FSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWG 321 (375)
Q Consensus 256 ~~~~~~~~~~~~a~~~~~~~-~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~ 321 (375)
++..++|.+...++|+++.. -.++..-...+.+.+.++++|+|+++..+++|..++++|++.....
T Consensus 38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 35678999999999999986 5677888999999999999999999999999999999999887654
No 78
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.60 E-value=0.0007 Score=52.32 Aligned_cols=64 Identities=8% Similarity=0.104 Sum_probs=56.9
Q ss_pred hhhhHhHHHHHHHhccCCcc-hhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhhee
Q 017191 256 IGSGVSFCVQAWCISKRGPL-FSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVL 319 (375)
Q Consensus 256 ~~~~~~~~~~~~a~~~~~~~-~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~ 319 (375)
++..+++++...++|+++.. ..++..-...+.+.+.+++++||++++.+++|++++++|++...
T Consensus 43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 35678999999999999986 45667888999999999999999999999999999999998764
No 79
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.52 E-value=0.00031 Score=53.93 Aligned_cols=66 Identities=18% Similarity=0.206 Sum_probs=58.3
Q ss_pred hhhhhHhHHHHHHHhccCCcc-hhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheee
Q 017191 255 AIGSGVSFCVQAWCISKRGPL-FSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLW 320 (375)
Q Consensus 255 ~~~~~~~~~~~~~a~~~~~~~-~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~ 320 (375)
+++.++++++...++|+++.. ..++..-+..+.+.+.|++++||++++.+++|+.++++|++....
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 446788999999999999986 556778899999999999999999999999999999999988753
No 80
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.49 E-value=0.00037 Score=53.96 Aligned_cols=110 Identities=17% Similarity=0.131 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 017191 14 LALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFE 93 (375)
Q Consensus 14 l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 93 (375)
++..++||...++.|..... .++..-.. +..-.... +++ +++ +.+ .=+++ -.+...|++
T Consensus 2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~-----Ll~---------n~~---y~i-pf~lN-q~GSv~f~~ 60 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKF-----LLL---------NPK---YII-PFLLN-QSGSVLFFL 60 (113)
T ss_pred eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHH-----HHH---------hHH---HHH-HHHHH-HHHHHHHHH
Confidence 45689999999999998653 54444331 21111111 000 222 222 22334 577788999
Q ss_pred hhcccchhhHhhh-hhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHH
Q 017191 94 GLYLASSSMASAM-GNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISM 150 (375)
Q Consensus 94 al~~~~~~~a~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~ 150 (375)
.+...+.+.+..+ +++.=++|++.++++.+|..+++ .++|+.+.+.|+.+.
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVALC 112 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeeee
Confidence 9999999999998 57899999999988888888888 999999999998764
No 81
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.44 E-value=9.5e-05 Score=64.96 Aligned_cols=137 Identities=15% Similarity=0.042 Sum_probs=109.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH
Q 017191 6 DYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVT 85 (375)
Q Consensus 6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 85 (375)
+..+.+..+.+++.-+...++.|..- +..+....+.+-.+++.+.-...+..-+... ....+|+|+.+..+|+++ .
T Consensus 189 ~~~gt~aai~s~lf~asvyIilR~iG-k~~h~~msvsyf~~i~lV~s~I~~~~ig~~~--lP~cgkdr~l~~~lGvfg-f 264 (346)
T KOG4510|consen 189 DIPGTVAAISSVLFGASVYIILRYIG-KNAHAIMSVSYFSLITLVVSLIGCASIGAVQ--LPHCGKDRWLFVNLGVFG-F 264 (346)
T ss_pred cCCchHHHHHhHhhhhhHHHHHHHhh-ccccEEEEehHHHHHHHHHHHHHHhhcccee--cCccccceEEEEEehhhh-h
Confidence 34567788888888888888888663 4477766666666676666555544333222 335788999999999999 8
Q ss_pred HHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 86 INQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 86 ~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
+++.+...|+|.--++-++++.++..++..++..+|+++.++++ .|.|+++.+...+.+..
T Consensus 265 igQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~w------s~~Ga~~vvsS~v~~a~ 325 (346)
T KOG4510|consen 265 IGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIW------SWVGAVMVVSSTVWVAL 325 (346)
T ss_pred HHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHH------HhhceeeeehhHHHHHH
Confidence 99999999999999999999999999999999999999999999 99998877776666654
No 82
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.43 E-value=0.0011 Score=52.16 Aligned_cols=68 Identities=15% Similarity=0.083 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHhhhcccchhhHhhhh-hhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 79 IALLGVTINQNTYFEGLYLASSSMASAMG-NLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 79 ~g~~~~~~~~~~~~~al~~~~~~~a~~l~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
..+..++.++.++..++++.|.+.+-.+. .+.-+.+.++++++++|++++. +++|+.+.++|++.+-.
T Consensus 35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhhc
Confidence 44555588999999999999999998875 6999999999999999999999 99999999999988864
No 83
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.36 E-value=0.0021 Score=49.87 Aligned_cols=67 Identities=13% Similarity=0.168 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHhhhcccchhhHhhh-hhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 80 ALLGVTINQNTYFEGLYLASSSMASAM-GNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 80 g~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
.+.++.+++.++..++++.|.+.+-.+ ..+.-+.+.++++++++|++++. +++|+.+.++|++.+-.
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence 455557889999999999999999877 56889999999999999999999 99999999999999864
No 84
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=97.33 E-value=0.0013 Score=60.67 Aligned_cols=141 Identities=15% Similarity=0.193 Sum_probs=113.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHCC---CChHHHHHHHHHHHHHHHHHHHHHh---hccccCCCCCHHHHHHHHH
Q 017191 5 RDYKPAMAMLALQFSYAVVALSTRAALLQG---MNPRVFVVYRQAIATLFMAPMAYLS---SRKYKSSSMGLRSFSLIFF 78 (375)
Q Consensus 5 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~---~~p~~~~~~r~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~ 78 (375)
|...|-++.+++++++|...++.|.-.++. ++--.+-.+-.++..++++|...+- +.++. ..++..+...++.
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F-~lP~~~q~~~vv~ 322 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERF-ELPSSTQFSLVVF 322 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcc-cCCCCceeEeeeH
Confidence 457899999999999999999999887632 4444444444566666777554332 33332 3446667778889
Q ss_pred HHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 79 IALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 79 ~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
.++++.+++..+|..|.-.+++-.+++-..++....++...++.+.++++. .++|.+..++|-+++..
T Consensus 323 ~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~------~iiGsi~Ifv~Fv~vn~ 390 (416)
T KOG2765|consen 323 NNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL------YIIGSIPIFVGFVIVNI 390 (416)
T ss_pred hhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHhheec
Confidence 999999999999999999999999999999888889999999899999999 99999999999998875
No 85
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.31 E-value=0.0014 Score=49.37 Aligned_cols=56 Identities=21% Similarity=0.304 Sum_probs=35.5
Q ss_pred hhhhHhHHHHHHHhccCCcchh-hhhhhHHHHHHHHHHHHHhcccccchhhhhHHHH
Q 017191 256 IGSGVSFCVQAWCISKRGPLFS-AMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGV 311 (375)
Q Consensus 256 ~~~~~~~~~~~~a~~~~~~~~~-s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~li 311 (375)
.+.++++.++.+++|+.+.+.+ .+...+..+.+.+.|.+++||++++.+++|+.+|
T Consensus 37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3678889999999999999876 5566799999999999999999999999999876
No 86
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.29 E-value=0.0062 Score=49.47 Aligned_cols=130 Identities=12% Similarity=0.090 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017191 10 AMAMLALQFSYAVVALSTRAALLQGMN-PRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQ 88 (375)
Q Consensus 10 ~l~~l~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 88 (375)
.++.+++..+-+....+.-..-+. .+ |...+++-+..+.+++..+....+++.. ...+ +..++....|+++ ...-
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~-~~~~-~~p~w~~lGG~lG-~~~V 78 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSL-ASLS-SVPWWAYLGGLLG-VFFV 78 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhccccc-chhc-cCChHHhccHHHH-HHHH
Confidence 455666666667777666666444 55 9999999999999999888877776422 2222 2234455588888 8888
Q ss_pred HHHHhhhcccchhhHhhhh-hhhHHHHHHHHHH----hhccccCCCccchhhhhhhHHHHhhhHhH
Q 017191 89 NTYFEGLYLASSSMASAMG-NLIPAITFVMASI----VGLEKIDLGSVRSVAKILGTIFCVGGAIS 149 (375)
Q Consensus 89 ~~~~~al~~~~~~~a~~l~-~~~pi~~~ll~~l----~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 149 (375)
.+..+.....+++.+..+. .-+-+...++..+ .-+++++++ +++|+++.++|+.+
T Consensus 79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLR------RILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHH------HHHHHHHHHHHHhC
Confidence 8899999999999888764 4566666777774 357788888 99999999999864
No 87
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=97.28 E-value=0.00088 Score=61.81 Aligned_cols=139 Identities=12% Similarity=0.181 Sum_probs=112.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHH---CCCChHHHHHHHHHHHHHHHH-HHHHHhhcccc---CC-CCCHHHHHHHH
Q 017191 6 DYKPAMAMLALQFSYAVVALSTRAALL---QGMNPRVFVVYRQAIATLFMA-PMAYLSSRKYK---SS-SMGLRSFSLIF 77 (375)
Q Consensus 6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~---~~~~p~~~~~~r~~~~~~~l~-~~~~~~~~~~~---~~-~~~~~~~~~~~ 77 (375)
++.|.+..+++.+..+...++.|..+. +.++++....+-.-++.+.++ |+....+.... .. ..+.. .....
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence 578999999999999999999999983 458999998888888888888 87665443221 11 23334 33334
Q ss_pred HHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 78 FIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 78 ~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
+.+++. ...+...|..+..+++-.-++...+-=+++...+++++++++++. +..|..++++|+.+-..
T Consensus 240 ~~sv~~-f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~------n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 240 LNSVLA-FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFL------NALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHHH-HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchh------hHHHHHHHHHHHHHHHH
Confidence 444666 777888899999999999999999999999999999999999999 99999999999998873
No 88
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.28 E-value=0.0023 Score=48.71 Aligned_cols=67 Identities=19% Similarity=0.195 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHhhhcccchhhHhhh-hhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 80 ALLGVTINQNTYFEGLYLASSSMASAM-GNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 80 g~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
.++++..++.+...++++.|.+.+-.+ ...-.+.+++.++++++|+.+.. +++++.+.++|++.+-.
T Consensus 36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHhhh
Confidence 344447889999999999999988766 57899999999999999999999 99999999999998753
No 89
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.28 E-value=0.0033 Score=48.31 Aligned_cols=65 Identities=11% Similarity=0.076 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHhhhcccchhhHhhh-hhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHh
Q 017191 81 LLGVTINQNTYFEGLYLASSSMASAM-GNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMA 151 (375)
Q Consensus 81 ~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 151 (375)
+.++..++.+...+++..|.+.+-.+ ....-+.+.+++++++||++++. +++++.+.+.|++.+-
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhhh
Confidence 44557899999999999999988766 46999999999999999999999 9999999999999875
No 90
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.25 E-value=0.00072 Score=60.58 Aligned_cols=79 Identities=10% Similarity=0.104 Sum_probs=68.3
Q ss_pred hhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccccc
Q 017191 246 EIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKD 325 (375)
Q Consensus 246 ~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~~ 325 (375)
+...+..-++ ...+...+.++++++.+|+...++..+..+++.++++++++.+++..||++..+..+|+.+........
T Consensus 16 ~~~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 16 DTLKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 3444444455 467788889999999999999999999999999999999999999999999999999999988766544
No 91
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.12 E-value=0.0023 Score=59.78 Aligned_cols=136 Identities=13% Similarity=0.136 Sum_probs=90.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHH--HHH--HHHhcCCCC-cccccccchhhHHHHhh
Q 017191 179 WLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQ--SAT--FAIFTEPDP-EAWNLHSSLEIFCCFFS 253 (375)
Q Consensus 179 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~--~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~ 253 (375)
...|.++.+++++||+.+.+-+|+ .++.+ .+.. |. ..+.+. +.+ ......++. ......+...+......
T Consensus 5 ~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~--wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~ 79 (345)
T PRK13499 5 IILGIIWHLIGGASSGSFYAPFKK-VKKWS--WETM-WS-VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLF 79 (345)
T ss_pred hHHHHHHHHHHHHHhhcccccccc-cCCCc--hhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHH
Confidence 468999999999999999999998 44542 2222 33 222211 111 111111221 12222234445554555
Q ss_pred hhhhhhHhHHHHHHHhccCCcchhhhh-hhHHHHHHHHHHHHHhcccc---c----chhhhhHHHHHhhhhheee
Q 017191 254 GAIGSGVSFCVQAWCISKRGPLFSAMF-NPLCTVIVTILAALLLHEEI---Y----TGSLVGAIGVILGLYAVLW 320 (375)
Q Consensus 254 g~~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pv~~~~~~~l~~~e~~---~----~~~~iG~~lil~g~~l~~~ 320 (375)
|+ .=.+++..+..++|+.|.+....+ .-++-+.+.+++.+++||-. + ...++|.+++++|+.+..+
T Consensus 80 G~-~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~ 153 (345)
T PRK13499 80 GA-LWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR 153 (345)
T ss_pred HH-HHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 55 567899999999999999977765 67889999999999999754 2 2456899999999999877
No 92
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.99 E-value=0.018 Score=51.51 Aligned_cols=186 Identities=6% Similarity=-0.028 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017191 9 PAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQ 88 (375)
Q Consensus 9 g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 88 (375)
|++..+.+.+++|++++-.|.. +. -|++.+-++.+....+.-+.+..+++. + +-+.+.++.|.+. +.++
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~-~~-gDg~~fQw~~~~~i~~~g~~v~~~~~~----p----~f~p~amlgG~lW-~~gN 69 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF-DT-GDGFFFQWVMCSGIFLVGLVVNLILGF----P----PFYPWAMLGGALW-ATGN 69 (254)
T ss_pred CchhHHHHHHHhcccceeeEec-cC-CCcHHHHHHHHHHHHHHHHHHHHhcCC----C----cceeHHHhhhhhh-hcCc
Confidence 4678899999999999999966 33 577777766665555555555444332 1 2245667777777 8999
Q ss_pred HHHHhhhcccchhhHhhhhhhhHHHH-HHHHHH-hhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCc---CC
Q 017191 89 NTYFEGLYLASSSMASAMGNLIPAIT-FVMASI-VGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNT---EF 163 (375)
Q Consensus 89 ~~~~~al~~~~~~~a~~l~~~~pi~~-~ll~~l-~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~---~~ 163 (375)
.+-.-.++..+.+....+.++.-+++ -..+++ +++++... ........+|++++++|..+...-+.+...+. +.
T Consensus 70 ~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~-~~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~ 148 (254)
T PF07857_consen 70 ILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQV-PSSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEE 148 (254)
T ss_pred eeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccc-cchhHHHHHHHHHHHHHHHheeeecCCCCCccccccc
Confidence 99999999999999999877644444 444443 45544332 23456688999999999888865433321110 00
Q ss_pred ---Ccc-------ccccc--cCC-----CCCchHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 017191 164 ---LPE-------KSFLF--RSS-----GGENWLLGCLFLFASACCWSLWLILQVPVSAS 206 (375)
Q Consensus 164 ---~~~-------~~~~~--~~~-----~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~ 206 (375)
..+ ++..+ ++. ..+....|+.+++++++.|+...+=..+..++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 149 TPLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred cccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence 000 00000 000 01135689999999999999877766655444
No 93
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.78 E-value=0.013 Score=44.04 Aligned_cols=57 Identities=21% Similarity=0.074 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHhhhcccchhhHhhh-hhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHH
Q 017191 80 ALLGVTINQNTYFEGLYLASSSMASAM-GNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIF 142 (375)
Q Consensus 80 g~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l 142 (375)
.+..+.+++.++..++++.|.+.+-.+ ..+..+.+.+.+.+++||+++.. ++.|+.+
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~l 92 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheee
Confidence 344557899999999999999999766 46999999999999999999999 9998875
No 94
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.61 E-value=0.0083 Score=46.49 Aligned_cols=109 Identities=11% Similarity=0.031 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhHhHHHHHH
Q 017191 188 ASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAW 267 (375)
Q Consensus 188 ~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 267 (375)
+-+++|+..+-+.|+..+..+ +..-.. +..-. ... ++. .|-.. ..++....+-..|++
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~-~~~~~~-~~~~~-~~~----Ll~-------------n~~y~--ipf~lNq~GSv~f~~ 60 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLE-KVKASL-QLLQE-IKF----LLL-------------NPKYI--IPFLLNQSGSVLFFL 60 (113)
T ss_pred eehHHhcCchHHHHHHHhhcC-CccchH-HHHHH-HHH----HHH-------------hHHHH--HHHHHHHHHHHHHHH
Confidence 457899999999999887763 222221 21111 111 111 11111 133345566678889
Q ss_pred HhccCCcchhhhh-hhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhhe
Q 017191 268 CISKRGPLFSAMF-NPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAV 318 (375)
Q Consensus 268 a~~~~~~~~~s~~-~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~ 318 (375)
.+++.+.+.+.++ +.+.-+++++.++++.+|..+...++|++++++|+.+.
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 9999999999888 59999999999988877777888999999999998764
No 95
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.60 E-value=0.0068 Score=54.23 Aligned_cols=133 Identities=10% Similarity=0.011 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhHh
Q 017191 182 GCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVS 261 (375)
Q Consensus 182 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 261 (375)
|.+.+++|+++++...+=.|+.... |.+...++++....+......+..+.. .+ ..+.++. |. .-+.+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~p--~f------~p~amlg-G~-lW~~g 68 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGFP--PF------YPWAMLG-GA-LWATG 68 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCCC--cc------eeHHHhh-hh-hhhcC
Confidence 4567788999999999988987654 677777777776655555555543221 11 1111111 11 22334
Q ss_pred HHHHHHHhccCCcchhhhh-hhHHHHHHHHHHHH-Hhcccc-----cchhhhhHHHHHhhhhheeecccccc
Q 017191 262 FCVQAWCISKRGPLFSAMF-NPLCTVIVTILAAL-LLHEEI-----YTGSLVGAIGVILGLYAVLWGKAKDH 326 (375)
Q Consensus 262 ~~~~~~a~~~~~~~~~s~~-~~~~pv~~~~~~~l-~~~e~~-----~~~~~iG~~lil~g~~l~~~~~~~~~ 326 (375)
..+-.-.+|.+|-...-.+ ...+.+.+...+-+ +||++. .+..++|++++++|..+...-|.+.+
T Consensus 69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~ 140 (254)
T PF07857_consen 69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEK 140 (254)
T ss_pred ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCC
Confidence 4445566777777655554 45577777777654 555433 55678999999999999887766554
No 96
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.54 E-value=0.031 Score=50.52 Aligned_cols=141 Identities=9% Similarity=0.039 Sum_probs=111.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChHHHHHHHHHHHHHHHHHHHHHhhcccc---CCCCCHHHHHHHHHHH
Q 017191 5 RDYKPAMAMLALQFSYAVVALSTRAALL-QGMNPRVFVVYRQAIATLFMAPMAYLSSRKYK---SSSMGLRSFSLIFFIA 80 (375)
Q Consensus 5 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~-~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~g 80 (375)
+...|+.++....+.-|.....-..... ..+++..+.+.-.+...+.-..-....+.... .-..+++.++.+++.+
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s 248 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYS 248 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHH
Confidence 4678999999998888888877776655 45888888888777776665544322221111 0234667788999999
Q ss_pred HHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 81 LLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 81 ~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
.++ ++++.+.|+-++.-++-.-+.+..+-=++..+++.+.++.++++. ||+|+.+.+.|+.+=..
T Consensus 249 ~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~------q~~g~~iVFg~i~l~~~ 313 (327)
T KOG1581|consen 249 TCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSE------QWLGVLIVFGGIFLEIL 313 (327)
T ss_pred Hhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchh------hccCeeeehHHHHHHHH
Confidence 999 899999999999888888888889999999999999999999999 99999999999887654
No 97
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.16 E-value=0.0043 Score=54.17 Aligned_cols=133 Identities=14% Similarity=0.107 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhHh
Q 017191 182 GCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVS 261 (375)
Q Consensus 182 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 261 (375)
+.+++++=++.|+..-....|... +|.+... .+.+|+++.....+++..+.. +...+..-+..|. .=.++
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~GG---~p~qQ~l-GtT~GALifaiiv~~~~~p~~-----T~~~~iv~~isG~-~Ws~G 72 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFGG---KPYQQTL-GTTLGALIFAIIVFLFVSPEL-----TLTIFIVGFISGA-FWSFG 72 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecCC---ChhHhhh-hccHHHHHHHHHHheeecCcc-----chhhHHHHHHhhh-Hhhhh
Confidence 567788889999987776665432 2444433 334445544444443322111 1122222233333 45678
Q ss_pred HHHHHHHhccCCcchhhhh-hhHHHHHHHHHHHHHhcccccchhhh----hHHHHHhhhhheeecccc
Q 017191 262 FCVQAWCISKRGPLFSAMF-NPLCTVIVTILAALLLHEEIYTGSLV----GAIGVILGLYAVLWGKAK 324 (375)
Q Consensus 262 ~~~~~~a~~~~~~~~~s~~-~~~~pv~~~~~~~l~~~e~~~~~~~i----G~~lil~g~~l~~~~~~~ 324 (375)
+..++++++..+.+++.++ .-.+-+-+.+++++.|||..+..+.+ ..++++.|+++..+.++.
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~ 140 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRN 140 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccc
Confidence 8899999999999999997 55778888999999999999887764 567788888887776553
No 98
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.01 E-value=0.035 Score=48.98 Aligned_cols=65 Identities=15% Similarity=0.025 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhH
Q 017191 78 FIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAIS 149 (375)
Q Consensus 78 ~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 149 (375)
...+.+ ..+..+..+.+++.++...+....+.++++.+++.++++|+++.. +++|+.+.+.|+.+
T Consensus 157 ~~~~~~-a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~l 221 (222)
T TIGR00803 157 IVGLLN-VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATFL 221 (222)
T ss_pred HHHHHH-HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeEe
Confidence 333444 677778889999999999999999999999999999999999999 99999999988654
No 99
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=95.95 E-value=0.17 Score=46.94 Aligned_cols=142 Identities=11% Similarity=-0.010 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCC---cHHHHHHHHHHHHHHHHHHHHHhcCCC--------CcccccccchhhHH
Q 017191 181 LGCLFLFASACCWSLWLILQVPVSASYP---DHLSLSAWMCFLATLQSATFAIFTEPD--------PEAWNLHSSLEIFC 249 (375)
Q Consensus 181 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 249 (375)
.=....++..+-++......|+..++.. .+.+..+..-..-.+++....+..++. ...+-...+....-
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 3445555566667777777776554431 355666666666666666666654311 01111112222333
Q ss_pred HHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccc
Q 017191 250 CFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKA 323 (375)
Q Consensus 250 ~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~ 323 (375)
+..-++ ...+-..+++.+..+.+++..++...+..+.+.++.+++++++++..||...++...|+.+......
T Consensus 95 ~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 95 VSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCC
Confidence 333333 3556667889999999999999999999999999999999999999999999999999999885443
No 100
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.69 E-value=0.35 Score=39.49 Aligned_cols=138 Identities=10% Similarity=0.016 Sum_probs=86.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH
Q 017191 6 DYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVT 85 (375)
Q Consensus 6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 85 (375)
.....+..+.+..+-.....+.-.+....-+|..-.+..+..+.+++..+..+..++.. .....+..++.+..|+++ +
T Consensus 3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~-~a~~~~~pwW~~~GG~lG-a 80 (150)
T COG3238 3 MYLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPG-LAAVASAPWWAWIGGLLG-A 80 (150)
T ss_pred cHHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCc-hhhccCCchHHHHccchh-h
Confidence 34455566666666666666666554442359999999999999998888877433322 222234455666677776 5
Q ss_pred HHHHHHHhhhcccchhhHhhh-hhhhHHHHHHHHHHh----hccccCCCccchhhhhhhHHHHhhhHhHHh
Q 017191 86 INQNTYFEGLYLASSSMASAM-GNLIPAITFVMASIV----GLEKIDLGSVRSVAKILGTIFCVGGAISMA 151 (375)
Q Consensus 86 ~~~~~~~~al~~~~~~~a~~l-~~~~pi~~~ll~~l~----~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 151 (375)
..-..-.......+++....+ ..-+-+...++..+= -+.+++.. +++|+++.++|++++.
T Consensus 81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~------r~lgi~L~l~gil~~~ 145 (150)
T COG3238 81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLP------RILGILLVLAGILLAR 145 (150)
T ss_pred hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHH------HHHHHHHHHHHHHHhc
Confidence 555555555666665555443 455555556655532 23556666 9999999999955554
No 101
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.62 E-value=0.14 Score=46.80 Aligned_cols=139 Identities=11% Similarity=0.129 Sum_probs=110.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChHHHHHHHHHHHHHHHHHHHHHhhccc----cC-CCCCHHHHHHHHHHH
Q 017191 7 YKPAMAMLALQFSYAVVALSTRAALL-QGMNPRVFVVYRQAIATLFMAPMAYLSSRKY----KS-SSMGLRSFSLIFFIA 80 (375)
Q Consensus 7 ~~g~l~~l~~~~~~~~~~~~~k~~~~-~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~----~~-~~~~~~~~~~~~~~g 80 (375)
..|+.+++...+.-+...+..|+..+ .+.+-+.++++..+.+.+.+....+..+... .. .......+..+.+.+
T Consensus 156 ~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lSc 235 (314)
T KOG1444|consen 156 LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSC 235 (314)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHH
Confidence 45788999999999999999999887 3477888999999999888888776555311 00 122345567777888
Q ss_pred HHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 81 LLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 81 ~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
+++ .+-..+-+++.+..++...++.....-..+.+...++.+++.++. .++|+.+++.|.++-..
T Consensus 236 v~g-f~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~------n~~gll~~~~ggv~Y~~ 300 (314)
T KOG1444|consen 236 VMG-FGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFL------NVIGLLVGFFGGVLYSY 300 (314)
T ss_pred HHH-HHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechh------hhHHHHHHhhhhhHHhh
Confidence 888 677777889999999998888887777777788888889999999 99999999999888763
No 102
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.61 E-value=0.0065 Score=55.22 Aligned_cols=126 Identities=13% Similarity=0.160 Sum_probs=92.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhh
Q 017191 177 ENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAI 256 (375)
Q Consensus 177 ~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 256 (375)
..+..|.++++.+++..+...++.|+..++.. . ... ..++. .....-...|+ .|++
T Consensus 17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~-~---~~~---------------ra~~g-g~~yl~~~~Ww----~G~l 72 (335)
T KOG2922|consen 17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAG-A---SGL---------------RAGEG-GYGYLKEPLWW----AGML 72 (335)
T ss_pred cCceeeeeehhhccEEEeeehhhhHHHHHHHh-h---hcc---------------cccCC-CcchhhhHHHH----HHHH
Confidence 45678999999999999999999998776641 1 000 10111 11111111222 4666
Q ss_pred hhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeecccccc
Q 017191 257 GSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKDH 326 (375)
Q Consensus 257 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~~~ 326 (375)
...++-.+.+.+....+++.++++..++.+.+.+++..+++|++++...+|+++.++|-.++...-.+++
T Consensus 73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~ 142 (335)
T KOG2922|consen 73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQ 142 (335)
T ss_pred HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccc
Confidence 6667777777888888999999999999999999999999999999999999999999888766554444
No 103
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.55 E-value=0.08 Score=46.07 Aligned_cols=140 Identities=9% Similarity=0.027 Sum_probs=96.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChHHHHHHHHHHHHHHHHHHHHHhhcccc---CCCCCHHHHHHHHHHHHH
Q 017191 7 YKPAMAMLALQFSYAVVALSTRAALL-QGMNPRVFVVYRQAIATLFMAPMAYLSSRKYK---SSSMGLRSFSLIFFIALL 82 (375)
Q Consensus 7 ~~g~l~~l~~~~~~~~~~~~~k~~~~-~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~ 82 (375)
-.|-++++++...-|.....--..-. .+-+.-.+.+.-.+-+.+.+..-.++.+.-.. .....+..|..+.+.++.
T Consensus 171 g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~ 250 (337)
T KOG1580|consen 171 GFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIA 250 (337)
T ss_pred chHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHH
Confidence 35677777777777776665433311 11223334444444444443332221111000 001134567888889999
Q ss_pred HHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhh
Q 017191 83 GVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALL 153 (375)
Q Consensus 83 ~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~ 153 (375)
+ ++++.|.|.-+.+-+|-..+++..+--+|+.++++++++..++.+ ||+|..+.+.|...-..+
T Consensus 251 s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D~~~ 314 (337)
T KOG1580|consen 251 S-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTADVVD 314 (337)
T ss_pred H-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhHhhc
Confidence 9 999999999999999999999999999999999999999999999 999999999998877653
No 104
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=95.41 E-value=0.015 Score=48.99 Aligned_cols=66 Identities=15% Similarity=0.139 Sum_probs=60.7
Q ss_pred HhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccccc
Q 017191 260 VSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKD 325 (375)
Q Consensus 260 ~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~~ 325 (375)
.+.++|..++++++++.++.+...+-.+..+++++.+|+++...+++.+++.+.|+++..+..+..
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~ 130 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH 130 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh
Confidence 355789999999999999999999999999999999999999999999999999999988876644
No 105
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=95.30 E-value=0.11 Score=44.85 Aligned_cols=137 Identities=12% Similarity=0.076 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-CCCChHHHHHHHHHHHHHHHHHHHHHhhcccc---CCCCCHHHHHHHHHHHHHHH
Q 017191 9 PAMAMLALQFSYAVVALSTRAALL-QGMNPRVFVVYRQAIATLFMAPMAYLSSRKYK---SSSMGLRSFSLIFFIALLGV 84 (375)
Q Consensus 9 g~l~~l~~~~~~~~~~~~~k~~~~-~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~ 84 (375)
|++.|....+.-+..-...|.-.+ .+...+...++.-+++.+++..+.++.+.+.. .-..+.....+.++.|++.
T Consensus 156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s- 234 (309)
T COG5070 156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS- 234 (309)
T ss_pred ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH-
Confidence 455555555555555556665544 33667888999999999999998877765443 1234455566788888888
Q ss_pred HHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 85 TINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 85 ~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
++-..+--++++-++.+..+.+..+.-.-.++-+.++++|+.+.. .+.++.+++...++-..
T Consensus 235 vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~------si~sillGflsg~iYav 296 (309)
T COG5070 235 VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL------SIFSILLGFLSGAIYAV 296 (309)
T ss_pred hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH------HHHHHHHHHHHHHHHHH
Confidence 677778889999999999999999999999999999999999999 99999999887766653
No 106
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=94.56 E-value=0.19 Score=46.57 Aligned_cols=140 Identities=14% Similarity=0.145 Sum_probs=87.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHH--hcCCCCc-ccccccchhhHHHHhhh
Q 017191 178 NWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAI--FTEPDPE-AWNLHSSLEIFCCFFSG 254 (375)
Q Consensus 178 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~g 254 (375)
....|+++..+++++.+.+.+=.||.. +.+ -.+.=..+.+++-+ ..|... ..-++.. .....+...++...+.|
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk-~Ws-WEs~Wlv~gi~swl-i~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G 80 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKVK-GWS-WESYWLVQGIFSWL-IVPWLWALLAIPDFFSIYSATPASTLFWTFLFG 80 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhcC-Ccc-HHHHHHHHHHHHHH-HHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence 346899999999999999999999754 442 22222223333333 333222 2223321 12223344555556666
Q ss_pred hhhhhHhHHHHHHHhccCCcch-hhhhhhHHHHHHHHHHHHHhcc-------cccchhhhhHHHHHhhhhheeec
Q 017191 255 AIGSGVSFCVQAWCISKRGPLF-SAMFNPLCTVIVTILAALLLHE-------EIYTGSLVGAIGVILGLYAVLWG 321 (375)
Q Consensus 255 ~~~~~~~~~~~~~a~~~~~~~~-~s~~~~~~pv~~~~~~~l~~~e-------~~~~~~~iG~~lil~g~~l~~~~ 321 (375)
+ .=+++-..|..++|++|.+. .++..-+..+++.++--++.|+ +-....++|.++.++|+.+.-+.
T Consensus 81 ~-lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A 154 (344)
T PF06379_consen 81 V-LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA 154 (344)
T ss_pred H-HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence 6 46677788899999999874 4455666666776665555432 22346788999999999998664
No 107
>PRK02237 hypothetical protein; Provisional
Probab=93.09 E-value=1.1 Score=34.08 Aligned_cols=53 Identities=17% Similarity=0.098 Sum_probs=40.9
Q ss_pred hhcc-cchhhHhhhh-hhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 94 GLYL-ASSSMASAMG-NLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 94 al~~-~~~~~a~~l~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
.++- .+.+.+-..+ ....+...+..+.+-++|++++ +++|..++++|+.++..
T Consensus 51 Tl~p~~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~------D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 51 TLQPDAAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRW------DWIGAAICLVGMAVIMY 105 (109)
T ss_pred hcCCchhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChh------HHHhHHHHHHhHHHhee
Confidence 3543 3445555444 4666667789999999999999 99999999999998864
No 108
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=92.36 E-value=3.6 Score=37.60 Aligned_cols=138 Identities=21% Similarity=0.173 Sum_probs=93.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHCC----CChHHHHHHHHHHHHHHHHHHHHHhhccccC----------CCCCHH
Q 017191 6 DYKPAMAMLALQFSYAVVALSTRAALLQG----MNPRVFVVYRQAIATLFMAPMAYLSSRKYKS----------SSMGLR 71 (375)
Q Consensus 6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~----~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~----------~~~~~~ 71 (375)
...|..+...+..+-|.-+.+.+..+.++ -+|+...+.-.-...+.++|..+..+..... +..-.+
T Consensus 162 ~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~r 241 (349)
T KOG1443|consen 162 NIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILR 241 (349)
T ss_pred eehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHH
Confidence 45789999999999999999999998742 2466666665555666666665554432210 111233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHH
Q 017191 72 SFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISM 150 (375)
Q Consensus 72 ~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~ 150 (375)
....+.+.|... ++--.+-+.=+..++.-..++..--.=+.+.+++....+++++.. .|.|..++..|+.+-
T Consensus 242 v~g~i~l~g~la-F~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~l------N~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 242 VIGLISLGGLLA-FLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLL------NWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHHHHHH-HHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhh------HHHHHHHHHHHHHHh
Confidence 344444555555 222233334455556555666666777888999999999999999 999999999999887
No 109
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=91.97 E-value=0.96 Score=34.37 Aligned_cols=53 Identities=15% Similarity=0.131 Sum_probs=42.3
Q ss_pred hhcccchhhHhhhh-hhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 94 GLYLASSSMASAMG-NLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 94 al~~~~~~~a~~l~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
.++-.+.+.+-..+ ....+...+..+.+-++|++++ +++|..+|++|+.++..
T Consensus 50 Tl~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~------D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 50 TLQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRW------DWIGAAICLVGVAIILF 103 (107)
T ss_pred hcCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChH------HHHhHHHHHHhHHheEe
Confidence 35555555555444 4677778889999999999999 99999999999999874
No 110
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=91.76 E-value=2.5 Score=32.02 Aligned_cols=113 Identities=18% Similarity=0.164 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---CCCCh--HHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH
Q 017191 11 MAMLALQFSYAVVALSTRAALL---QGMNP--RVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVT 85 (375)
Q Consensus 11 l~~l~~~~~~~~~~~~~k~~~~---~~~~p--~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 85 (375)
.-+++..++||...++.|.... +--++ ....+.|-... -..+++++.. -+++ -
T Consensus 6 ~~lvaVgllWG~Tnplirrgs~g~~~v~~~~~k~~~~lqe~~t-----------------l~l~w~Y~iP----FllN-q 63 (125)
T KOG4831|consen 6 DKLVAVGLLWGATNPLIRRGSLGWDKVKSSSRKIMIALQEMKT-----------------LFLNWEYLIP----FLLN-Q 63 (125)
T ss_pred HHHHHHHHHHccccHHHHHHHhhHhhccCchHHHHHHHHHHHH-----------------HHHhHHHHHH----HHHH-H
Confidence 3567889999999999997732 11111 12222222111 1112233222 2234 3
Q ss_pred HHHHHHHhhhcccchhhHhhhh-hhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHh
Q 017191 86 INQNTYFEGLYLASSSMASAMG-NLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMA 151 (375)
Q Consensus 86 ~~~~~~~~al~~~~~~~a~~l~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 151 (375)
.+..+||.-++..+.+.+..+. ++.-.|+.+.+..+..|-...+ .++|..+.++|+.+.+
T Consensus 64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~------a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGL------ALLGTSLIVFGIWLCI 124 (125)
T ss_pred hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccce------eehhhhHHhhhhhhee
Confidence 5567888999999999999885 5788888888888555555566 8889999999877643
No 111
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=91.55 E-value=0.082 Score=46.66 Aligned_cols=109 Identities=10% Similarity=0.018 Sum_probs=84.5
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHH
Q 017191 207 YPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTV 286 (375)
Q Consensus 207 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv 286 (375)
.+.|...++.....-+++-.+...+..+.. ..-|-..+.+++ ..+=+.++...|.++++-+.++.+..-..+
T Consensus 45 iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~-------~~~~~hYilla~-~DVEaNy~vV~AyQyTsmtSi~lLDcwaip 116 (336)
T KOG2766|consen 45 INAPTSQTFLNYVLLALVYGPIMLFRRKYI-------KAKWRHYILLAF-VDVEANYFVVKAYQYTSMTSIMLLDCWAIP 116 (336)
T ss_pred CCCccHHHHHHHHHHHHHHhhHHHhhhHHH-------HHHHHHhhheeE-EeecccEEEeeehhhcchHHHHHHHHhhhH
Confidence 335777777777777777777777654221 112333445555 455666777899999999999999999999
Q ss_pred HHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccc
Q 017191 287 IVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKA 323 (375)
Q Consensus 287 ~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~ 323 (375)
...+++|++++.+-.+.++.|.++.+.|+.++....-
T Consensus 117 ~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV 153 (336)
T KOG2766|consen 117 CVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDV 153 (336)
T ss_pred HHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeee
Confidence 9999999999999999999999999999998877544
No 112
>PRK02237 hypothetical protein; Provisional
Probab=91.39 E-value=0.93 Score=34.52 Aligned_cols=48 Identities=8% Similarity=0.076 Sum_probs=41.4
Q ss_pred hhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccc
Q 017191 276 FSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKA 323 (375)
Q Consensus 276 ~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~ 323 (375)
..+.+.-.-.+.+++.++.+-|++|+...++|.++.++|+.++.+..|
T Consensus 61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR 108 (109)
T PRK02237 61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR 108 (109)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence 455667777888999999999999999999999999999988876554
No 113
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=91.19 E-value=0.95 Score=34.39 Aligned_cols=48 Identities=15% Similarity=0.137 Sum_probs=42.1
Q ss_pred hhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccc
Q 017191 276 FSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKA 323 (375)
Q Consensus 276 ~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~ 323 (375)
..+.+.-.-.+.+++.++.+-|++|+...++|.++.++|+.++.+..|
T Consensus 59 vYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 59 VYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred HHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 455667778889999999999999999999999999999999887654
No 114
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=90.72 E-value=0.11 Score=46.95 Aligned_cols=134 Identities=13% Similarity=0.096 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCc-----------ccccccchhhHHHHhhhh
Q 017191 187 FASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPE-----------AWNLHSSLEIFCCFFSGA 255 (375)
Q Consensus 187 l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~g~ 255 (375)
+++.+||+-+-..+|-..++.. ..+...|=+..+.++...+..++-+... +....++..+...+..|+
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR-~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv 80 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGR-LPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV 80 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCC-ccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence 4567888888888886655432 2234555555555554444433322211 111122223333333344
Q ss_pred hhhhHhHHHHHHHhccCCcchhhhhh-hHHHHHHHHHHHHHhccccc--chhhhhHHHHHhhhhheeeccc
Q 017191 256 IGSGVSFCVQAWCISKRGPLFSAMFN-PLCTVIVTILAALLLHEEIY--TGSLVGAIGVILGLYAVLWGKA 323 (375)
Q Consensus 256 ~~~~~~~~~~~~a~~~~~~~~~s~~~-~~~pv~~~~~~~l~~~e~~~--~~~~iG~~lil~g~~l~~~~~~ 323 (375)
.--++..+..+++...|-+++-++. .+..+++.++.|+. ..+.. ..-..|++++++++++-....+
T Consensus 81 -vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~~n~a~iLF~GV~cf~iAI~lga~ah~ 149 (336)
T PF07168_consen 81 -VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPKINRAEILFPGVACFLIAIILGAAAHK 149 (336)
T ss_pred -hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCCCCCceEEEccHHHHHHHHHHHHHHHh
Confidence 5567888888999888887766653 33444556666643 45543 3556799999999888654433
No 115
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=89.70 E-value=1.8 Score=32.66 Aligned_cols=47 Identities=15% Similarity=0.145 Sum_probs=37.6
Q ss_pred hhhHhhhh-hhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 100 SSMASAMG-NLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 100 ~~~a~~l~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
.+.+-.-+ ....+...+..+++-|.+++++ +++|..+|++|+.++..
T Consensus 57 ~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~------D~~Ga~icl~G~~vil~ 104 (109)
T COG1742 57 FGRVYAAYGGVYIAASLAWLWVVDGVRPDRY------DWIGAAICLAGVAVILF 104 (109)
T ss_pred hhhHHHHhcchHHHHHHHHHHHHcCcCCcHH------HhhhHHHHHhceeeeEe
Confidence 44444333 4667777888889999999999 99999999999888874
No 116
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=89.24 E-value=2.9 Score=37.53 Aligned_cols=140 Identities=14% Similarity=0.181 Sum_probs=98.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChHHHHHHHHHHHHHHHHHHHHHhhccccC----CCCCHHHHHHHHHHH
Q 017191 6 DYKPAMAMLALQFSYAVVALSTRAALL-QGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKS----SSMGLRSFSLIFFIA 80 (375)
Q Consensus 6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~-~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~g 80 (375)
+..|+..+-.+.+.-+...-+-...+. ..-+..+++++...++.++++..+.+.+.-.+. .+.+.|...+.++.+
T Consensus 188 ~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s 267 (367)
T KOG1582|consen 188 NLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFS 267 (367)
T ss_pred ceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHH
Confidence 345555555555555554444444443 234568888888889988888877655432220 234667777888888
Q ss_pred HHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191 81 LLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL 152 (375)
Q Consensus 81 ~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 152 (375)
..+ .++..+...=++..++..++.+...--..+.+++++++.++++-. -.-+.++.+.|+.+=..
T Consensus 268 ~~g-ylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~q------y~~~gllv~lgI~Ln~y 332 (367)
T KOG1582|consen 268 LAG-YLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQ------YVWSGLLVVLGIYLNMY 332 (367)
T ss_pred HHh-HhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHH------HhhhhHHHHHHHHhhcc
Confidence 777 566666555566667888888888888899999999999999988 88888899999888774
No 117
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=88.23 E-value=0.71 Score=41.49 Aligned_cols=65 Identities=15% Similarity=0.088 Sum_probs=58.6
Q ss_pred hhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeec
Q 017191 257 GSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWG 321 (375)
Q Consensus 257 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~ 321 (375)
+-..+-.+.+.++..++++...++.-...+|+.+++.-+++.+++..||.|+..+.+|+..+-..
T Consensus 95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 55566678889999999999999999999999999999999999999999999999998887543
No 118
>PRK12650 putative monovalent cation/H+ antiporter subunit A; Reviewed
Probab=83.87 E-value=70 Score=34.82 Aligned_cols=37 Identities=8% Similarity=0.204 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhh
Q 017191 71 RSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNL 109 (375)
Q Consensus 71 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~ 109 (375)
++...++..|+.+...+ ..|.-+.--+.+.+++..-+
T Consensus 620 ~rl~av~~~g~~G~~~a--l~f~~~~APDvAlTq~~Vet 656 (962)
T PRK12650 620 TRLAAVVLVGVVGVGVT--LQMLTLGAPDVALTQLLVEA 656 (962)
T ss_pred HHHHHHHHHHHHHHHHH--HHHHHhCCcHHHHHHHHHHH
Confidence 34667777788774443 33444555566666666544
No 119
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=83.84 E-value=2.3 Score=38.26 Aligned_cols=144 Identities=15% Similarity=0.104 Sum_probs=99.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHCC-CChHHHHHHHHHHHHHHHHHHHHHhhcccc----CCCCCHHHHHHHHHHH
Q 017191 6 DYKPAMAMLALQFSYAVVALSTRAALLQG-MNPRVFVVYRQAIATLFMAPMAYLSSRKYK----SSSMGLRSFSLIFFIA 80 (375)
Q Consensus 6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~-~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~g 80 (375)
.+.|.++.+++.+.-+...+..|..+..- -.-+.++++..+.+.++++|...+.+.-.. ......+-|..+.+.|
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg 262 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG 262 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence 46899999999999999999999665431 124677888889999999998876553211 1223666777888888
Q ss_pred HHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCC
Q 017191 81 LLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGP 156 (375)
Q Consensus 81 ~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~ 156 (375)
+++...++.. .+=++.++|-.--+=...-...=.++++.+++|..+.. .|-+.++.++|-..-...++.
T Consensus 263 lfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~l------wwtsn~~vLvgs~~YT~vk~~ 331 (347)
T KOG1442|consen 263 LFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGL------WWTSNIVVLVGSLAYTLVKEH 331 (347)
T ss_pred HHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhh------eeeeeEEEEehhHHHHHHHHH
Confidence 8885555443 23445555433222222334445678888999999988 999999999998877654443
No 120
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=83.03 E-value=28 Score=30.10 Aligned_cols=33 Identities=12% Similarity=0.193 Sum_probs=22.2
Q ss_pred HHHHHHHhcccccchhhhhHHHHHh--hhhheeec
Q 017191 289 TILAALLLHEEIYTGSLVGAIGVIL--GLYAVLWG 321 (375)
Q Consensus 289 ~~~~~l~~~e~~~~~~~iG~~lil~--g~~l~~~~ 321 (375)
-.+|..++.+-.-+.+++|..+.++ |.+...++
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~~ 167 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLARR 167 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 4457777788888888888877664 54444443
No 121
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=82.20 E-value=5.4 Score=30.16 Aligned_cols=48 Identities=13% Similarity=0.092 Sum_probs=41.2
Q ss_pred hhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccc
Q 017191 276 FSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKA 323 (375)
Q Consensus 276 ~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~ 323 (375)
..+...-.-.+.+.+..++.-|.+|+.+.++|.++.++|..++....+
T Consensus 60 vYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR 107 (109)
T COG1742 60 VYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR 107 (109)
T ss_pred HHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence 445566777888999999999999999999999999999888887755
No 122
>PF15102 TMEM154: TMEM154 protein family
Probab=80.95 E-value=1.3 Score=35.80 Aligned_cols=24 Identities=13% Similarity=0.087 Sum_probs=14.8
Q ss_pred hhhHHHHHhhhhheeecccccccc
Q 017191 305 LVGAIGVILGLYAVLWGKAKDHFD 328 (375)
Q Consensus 305 ~iG~~lil~g~~l~~~~~~~~~~~ 328 (375)
++++++++..++++.+.|||+.|+
T Consensus 66 VLLvlLLl~vV~lv~~~kRkr~K~ 89 (146)
T PF15102_consen 66 VLLVLLLLSVVCLVIYYKRKRTKQ 89 (146)
T ss_pred HHHHHHHHHHHHheeEEeecccCC
Confidence 344555666677777766666654
No 123
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=78.55 E-value=2.3 Score=32.23 Aligned_cols=31 Identities=13% Similarity=0.210 Sum_probs=26.5
Q ss_pred HHHHHHHhcccccchhhhhHHHHHhhhhhee
Q 017191 289 TILAALLLHEEIYTGSLVGAIGVILGLYAVL 319 (375)
Q Consensus 289 ~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~ 319 (375)
..+++++++|++++..+.|.++++++++.+.
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF 107 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFIF 107 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence 3457889999999999999999999977654
No 124
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=74.61 E-value=36 Score=32.51 Aligned_cols=8 Identities=0% Similarity=-0.301 Sum_probs=3.1
Q ss_pred hhhHhHHH
Q 017191 257 GSGVSFCV 264 (375)
Q Consensus 257 ~~~~~~~~ 264 (375)
...+++.+
T Consensus 72 ~~~~~~~~ 79 (385)
T PF03547_consen 72 IFILGLLL 79 (385)
T ss_pred HHHHHHHH
Confidence 34444333
No 125
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=74.57 E-value=6.7 Score=29.76 Aligned_cols=60 Identities=13% Similarity=0.159 Sum_probs=46.5
Q ss_pred HhHHHHHHHhccCCcchhhhh-hhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhhee
Q 017191 260 VSFCVQAWCISKRGPLFSAMF-NPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVL 319 (375)
Q Consensus 260 ~~~~~~~~a~~~~~~~~~s~~-~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~ 319 (375)
.+-.+|+..+++.+-+.+..+ +.+.-.++.+.|..+-.|......+.|..++++|+.+..
T Consensus 64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 344566777888888877665 566888899999987555667888899999999988753
No 126
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=71.59 E-value=41 Score=30.57 Aligned_cols=135 Identities=12% Similarity=0.111 Sum_probs=85.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChHHHHHHHHHHHHHHHHHHHH--------Hhhcccc-CCCCC---HHHH
Q 017191 7 YKPAMAMLALQFSYAVVALSTRAALL-QGMNPRVFVVYRQAIATLFMAPMAY--------LSSRKYK-SSSMG---LRSF 73 (375)
Q Consensus 7 ~~g~l~~l~~~~~~~~~~~~~k~~~~-~~~~p~~~~~~r~~~~~~~l~~~~~--------~~~~~~~-~~~~~---~~~~ 73 (375)
..|+.++.++.+.-+...+.-...++ .|-++-+..|+-.+...+.++...- .+..+.- .|... +..|
T Consensus 163 ~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~ 242 (330)
T KOG1583|consen 163 LIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMW 242 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHH
Confidence 46677777777777777777776665 4678999999999998887776421 1111100 01111 1223
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc----cchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhH
Q 017191 74 SLIFFIALLGVTINQNTYFEGLYL----ASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAIS 149 (375)
Q Consensus 74 ~~~~~~g~~~~~~~~~~~~~al~~----~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 149 (375)
.+++ ++ ++.+.+=..+... .++-.+++...+-=.+..+++.+.++..++++ .|+|.++.+.|.++
T Consensus 243 ~yLl----~n-~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~------h~lGa~lVF~Gt~~ 311 (330)
T KOG1583|consen 243 VYLL----FN-VLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPW------HWLGAALVFFGTLL 311 (330)
T ss_pred HHHH----HH-HHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHH------HHHHHHHHHHHHHH
Confidence 3322 22 2322222222221 12334456667778889999999999999999 99999999999988
Q ss_pred Hhh
Q 017191 150 MAL 152 (375)
Q Consensus 150 ~~~ 152 (375)
...
T Consensus 312 fa~ 314 (330)
T KOG1583|consen 312 FAN 314 (330)
T ss_pred HHH
Confidence 874
No 127
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=70.42 E-value=52 Score=34.85 Aligned_cols=45 Identities=18% Similarity=0.114 Sum_probs=31.1
Q ss_pred hhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHH
Q 017191 100 SSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISM 150 (375)
Q Consensus 100 ~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~ 150 (375)
.+.+.++..+.|+-.+.++.+...+|.+.. .+.+.+-.++|.+-+
T Consensus 10 lgRa~il~~l~PFg~af~~a~~~~~~~~~~------~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 10 LGRAVIVSPMAPFGIAFLAAVLLAKKGGDK------AFFSALGVLLGAISI 54 (764)
T ss_pred HhHHHHhcCCCchHHHHHHHHHHhhcccch------HHHHHHHHHHHHHHh
Confidence 456778888999999988888776665444 555555555555544
No 128
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=70.36 E-value=8 Score=28.89 Aligned_cols=32 Identities=13% Similarity=0.180 Sum_probs=27.9
Q ss_pred HHHHHHHhcccccchhhhhHHHHHhhhhheee
Q 017191 289 TILAALLLHEEIYTGSLVGAIGVILGLYAVLW 320 (375)
Q Consensus 289 ~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~ 320 (375)
..+++++++|++.+..+.|..++.+|+.++.+
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 34689999999999999999999999887654
No 129
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=68.97 E-value=1.2e+02 Score=29.86 Aligned_cols=50 Identities=8% Similarity=-0.007 Sum_probs=29.8
Q ss_pred hhhhhhHHHHHHHHHHHHHhcc-----cccchhhhhHHHHHhhhhheeecccccc
Q 017191 277 SAMFNPLCTVIVTILAALLLHE-----EIYTGSLVGAIGVILGLYAVLWGKAKDH 326 (375)
Q Consensus 277 ~s~~~~~~pv~~~~~~~l~~~e-----~~~~~~~iG~~lil~g~~l~~~~~~~~~ 326 (375)
..++..+.-+.=+++..+--.+ .++..|++.+.++++|++++.+.+++++
T Consensus 226 f~lYli~Ygi~RF~iEflR~d~~~~~~gl~~~Q~lSl~~il~gl~~~~~~~~~~~ 280 (460)
T PRK13108 226 FGFYVAFYCAGRFCVELLRDDPATLIAGIRINSFTSTFVFIGAVVYIILAPKGRE 280 (460)
T ss_pred HHHHHHHHHHHHHHhhhhccCchhhhcCccHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 3444444444444444331111 2788999999999999887765444333
No 130
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=63.40 E-value=1e+02 Score=26.74 Aligned_cols=32 Identities=13% Similarity=0.053 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccchhh
Q 017191 70 LRSFSLIFFIALLGVTINQNTYFEGLYLASSSM 102 (375)
Q Consensus 70 ~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~ 102 (375)
++.++..++.++.. .+.+...+...+..++..
T Consensus 143 r~~~~k~~~~~~~~-~~~w~~~~~~~~~lp~~i 174 (206)
T PF06570_consen 143 RPSWWKYILISVLA-MVLWIVIFVLTSFLPPVI 174 (206)
T ss_pred ccHHHHHHHHHHHH-HHHHHHHHHHHHHccccC
Confidence 33444444444444 344444444555555553
No 131
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=57.30 E-value=4.9 Score=36.73 Aligned_cols=113 Identities=12% Similarity=0.044 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHh-hcc------cc-----CCCCCHHHHHHHHHHH
Q 017191 13 MLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLS-SRK------YK-----SSSMGLRSFSLIFFIA 80 (375)
Q Consensus 13 ~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~-~~~------~~-----~~~~~~~~~~~~~~~g 80 (375)
|+++.++||+.....|.+-.+ --..+...+-+.++.++..++.-+. ++- .+ ....++......+..|
T Consensus 1 M~itmlcwGSW~nt~kL~~r~-gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAERR-GRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHHHhc-CCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 467789999999999988543 2333446666666666555544221 111 11 1234666677777888
Q ss_pred HHHHHHHHHHHHhhhcccchhhHhhhhh-hhHHHHHHHHHHhhccccCC
Q 017191 81 LLGVTINQNTYFEGLYLASSSMASAMGN-LIPAITFVMASIVGLEKIDL 128 (375)
Q Consensus 81 ~~~~~~~~~~~~~al~~~~~~~a~~l~~-~~pi~~~ll~~l~~~e~~~~ 128 (375)
++. .+++.+..+|+.+.+.+.+-++.. +.-++-+.+.++ +..|.++
T Consensus 80 vvf-nlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~ 126 (336)
T PF07168_consen 80 VVF-NLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINR 126 (336)
T ss_pred Hhh-hhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCC
Confidence 887 889999999999999998877753 333334444443 4556553
No 132
>PF03348 Serinc: Serine incorporator (Serinc); InterPro: IPR005016 This is a family of proteins which display differential expression in various tumour and cell lines. The function of these proteins is unknown. ; GO: 0016020 membrane
Probab=50.55 E-value=2.5e+02 Score=27.46 Aligned_cols=59 Identities=8% Similarity=-0.075 Sum_probs=35.4
Q ss_pred hhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeecccc
Q 017191 253 SGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAK 324 (375)
Q Consensus 253 ~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~ 324 (375)
.+++.....|.+| -|+...+...-+.. -.--+..-+...++|.++.++.+.....+...
T Consensus 249 ssvv~~Y~~yL~~-SAlss~P~~~CNp~------------~~~~~~~~~~~~iig~i~~~~~v~yss~ra~~ 307 (429)
T PF03348_consen 249 SSVVSLYTTYLTW-SALSSEPDKECNPS------------GSRSGSWNTWQSIIGLIFTFVSVLYSSFRASS 307 (429)
T ss_pred HHHHHHHHHHHHH-HHHHcCCCcccCCc------------ccccCCcchHHHHHHHHHHHHHHHHhcccccc
Confidence 4554555566666 66766664443333 00123345677789999999998777665543
No 133
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=50.33 E-value=5.3 Score=36.00 Aligned_cols=51 Identities=4% Similarity=-0.034 Sum_probs=0.0
Q ss_pred hcccchhhHhhhhhhhHHHHHHHH--HHhhccccCCCccchhhhhhhHHHHhhhHhHHh
Q 017191 95 LYLASSSMASAMGNLIPAITFVMA--SIVGLEKIDLGSVRSVAKILGTIFCVGGAISMA 151 (375)
Q Consensus 95 l~~~~~~~a~~l~~~~pi~~~ll~--~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 151 (375)
++-.+-+..+++++...+.++++- .+|.|+-+-+. ..+++++.++-.++..
T Consensus 44 msd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPL------GlLCiilimi~lLv~~ 96 (381)
T PF05297_consen 44 MSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPL------GLLCIILIMIVLLVSM 96 (381)
T ss_dssp -----------------------------------------------------------
T ss_pred HhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcc------hHHHHHHHHHHHHHHH
Confidence 333344444555554444433333 33334434455 6667666665444443
No 134
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=47.32 E-value=9.9 Score=23.75 Aligned_cols=17 Identities=18% Similarity=0.241 Sum_probs=8.7
Q ss_pred ccchhhhhHHHHHhhhh
Q 017191 300 IYTGSLVGAIGVILGLY 316 (375)
Q Consensus 300 ~~~~~~iG~~lil~g~~ 316 (375)
|+|..++=.++|+.|++
T Consensus 2 p~wlt~iFsvvIil~If 18 (49)
T PF11044_consen 2 PTWLTTIFSVVIILGIF 18 (49)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 44555555555555543
No 135
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=45.20 E-value=2e+02 Score=24.79 Aligned_cols=24 Identities=13% Similarity=0.271 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 017191 180 LLGCLFLFASACCWSLWLILQVPV 203 (375)
Q Consensus 180 ~~G~~~~l~a~~~~a~~~v~~k~~ 203 (375)
..+....++++++++++..+.||.
T Consensus 178 l~~~~~iiig~i~~~~~~~lkkk~ 201 (206)
T PF06570_consen 178 LPPWVYIIIGVIAFALRFYLKKKY 201 (206)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHh
Confidence 346677788888888888777765
No 136
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=43.53 E-value=1.5e+02 Score=22.73 Aligned_cols=31 Identities=6% Similarity=0.006 Sum_probs=22.8
Q ss_pred HHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhH
Q 017191 113 ITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAIS 149 (375)
Q Consensus 113 ~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 149 (375)
.-+.++.+++||++++. ...|..+.+.++..
T Consensus 75 vF~~Fsv~~l~E~l~~n------~l~af~~i~~av~f 105 (108)
T PF04342_consen 75 VFAPFSVFYLGEPLKWN------YLWAFLCILGAVYF 105 (108)
T ss_pred eeHHHHHHHhCCCccHH------HHHHHHHHHHhhhe
Confidence 33677888999999998 77777766555443
No 137
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=43.25 E-value=13 Score=30.09 Aligned_cols=44 Identities=20% Similarity=0.322 Sum_probs=28.4
Q ss_pred HhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHH
Q 017191 268 CISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVI 312 (375)
Q Consensus 268 a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil 312 (375)
++..-+...++.+.|+.|.++++++.+. -+.+...+.+-++.++
T Consensus 68 Gi~EkslL~sA~LvYi~PL~~l~v~~~L-a~~L~~~e~~~~~~~~ 111 (150)
T COG3086 68 GIEEKSLLKSALLVYIFPLVGLFLGAIL-AQYLFFSELIVIFGAF 111 (150)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhhHHHHHHHH
Confidence 3455567788999999999999998876 3333333333333333
No 138
>PF15345 TMEM51: Transmembrane protein 51
Probab=41.64 E-value=9.8 Score=33.29 Aligned_cols=23 Identities=13% Similarity=0.205 Sum_probs=17.4
Q ss_pred hhHHHHHhhhhheeecccccccc
Q 017191 306 VGAIGVILGLYAVLWGKAKDHFD 328 (375)
Q Consensus 306 iG~~lil~g~~l~~~~~~~~~~~ 328 (375)
.|+++.++++++-.+.|+|++..
T Consensus 67 ~Gv~LLLLSICL~IR~KRr~rq~ 89 (233)
T PF15345_consen 67 SGVALLLLSICLSIRDKRRRRQG 89 (233)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Confidence 58888889999888877765543
No 139
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=40.67 E-value=13 Score=29.18 Aligned_cols=15 Identities=13% Similarity=0.474 Sum_probs=8.8
Q ss_pred HHhhhhhhhhHhHHH
Q 017191 250 CFFSGAIGSGVSFCV 264 (375)
Q Consensus 250 ~~~~g~~~~~~~~~~ 264 (375)
++..|++.++++|.+
T Consensus 59 ili~GvvvT~vays~ 73 (129)
T PF15099_consen 59 ILIAGVVVTAVAYSF 73 (129)
T ss_pred HHHHhhHhheeeEee
Confidence 345566666666644
No 140
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=40.62 E-value=4e+02 Score=26.86 Aligned_cols=15 Identities=7% Similarity=-0.259 Sum_probs=7.8
Q ss_pred hhHHHHHHHHHHHHH
Q 017191 281 NPLCTVIVTILAALL 295 (375)
Q Consensus 281 ~~~~pv~~~~~~~l~ 295 (375)
....|+=+.+.|.+.
T Consensus 353 ~g~~~lGsll~G~la 367 (524)
T PF05977_consen 353 FGGMPLGSLLWGFLA 367 (524)
T ss_pred HHHHHHHHHHHHHHH
Confidence 344555555556543
No 141
>PF06084 Cytomega_TRL10: Cytomegalovirus TRL10 protein; InterPro: IPR009284 This family consists of several Cytomegalovirus TRL10 proteins. TRL10 represents a structural component of the virus particle and like the other HCMV envelope glycoproteins, is present in a disulphide-linked complex [].
Probab=40.13 E-value=58 Score=25.01 Aligned_cols=25 Identities=16% Similarity=0.526 Sum_probs=16.3
Q ss_pred cchhhhhHHHHHhhhhheeeccccc
Q 017191 301 YTGSLVGAIGVILGLYAVLWGKAKD 325 (375)
Q Consensus 301 ~~~~~iG~~lil~g~~l~~~~~~~~ 325 (375)
+...++...+++.-++.+.+.+.+.
T Consensus 61 gagsfiatliillviffviy~re~~ 85 (150)
T PF06084_consen 61 GAGSFIATLIILLVIFFVIYSREEE 85 (150)
T ss_pred ccchHHHHHHHHHHHhheeEecccc
Confidence 4456677777777777777655443
No 142
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=38.30 E-value=4e+02 Score=26.16 Aligned_cols=27 Identities=22% Similarity=0.379 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhC
Q 017191 181 LGCLFLFASACCWSLWLILQVPVSASY 207 (375)
Q Consensus 181 ~G~~~~l~a~~~~a~~~v~~k~~~~~~ 207 (375)
.+..+.+.++.|-++-..+.+...++.
T Consensus 351 F~~AYliAa~a~i~Li~~Y~~~vl~~~ 377 (430)
T PF06123_consen 351 FNLAYLIAALACIGLISLYLSSVLKSW 377 (430)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 344555666666666666666655543
No 143
>PF03595 SLAC1: Voltage-dependent anion channel; InterPro: IPR004695 Two members of the Tellurite-Resistance/Dicarboxylate Transporter (TDT) family have been functionally characterised. One is the TehA protein of Escherichia coli which has been implicated in resistance to tellurite; the other is the Mae1 protein of Schizosaccharomyces pombe which functions in the uptake of malate and other dicarboxylates by a proton symport mechanism. These proteins exhibit 10 putative transmembrane a-helical spanners (TMSs).; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3M76_A 3M7C_A 3M7E_A 3M74_A 3M7B_A 3M71_A 3M72_A 3M77_A 3M7L_A 3M75_A ....
Probab=38.12 E-value=3.3e+02 Score=25.20 Aligned_cols=78 Identities=15% Similarity=0.110 Sum_probs=43.7
Q ss_pred hhhhHHHHhhhHhHHhhhcCCcccCcCCCccccccccCCCCCchHHHHHHHHHHHHHHHH-------HHHHHHH-hhhhC
Q 017191 136 KILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSL-------WLILQVP-VSASY 207 (375)
Q Consensus 136 ~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~-------~~v~~k~-~~~~~ 207 (375)
.+.++.++..|+..+.. .-+. ........|..+..++.+.|.. -.+..++ ..++.
T Consensus 6 ~~f~~~mGtg~l~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~el 68 (330)
T PF03595_consen 6 AWFGMVMGTGGLSNLLY-LLPY----------------HFGGLAILSEVLFILALILFLVLLVLYLLRWIRYPKAFKAEL 68 (330)
T ss_dssp GGGHHHHHHHHHHHHHH-TTTT----------------TSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHH----------------hccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 78899999999888873 1110 2233345677776666666666 2222222 22333
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHH
Q 017191 208 PDHLSLSAWMCFLATLQSATFAI 230 (375)
Q Consensus 208 ~~~~~~~~~~~~~~~i~~~~~~~ 230 (375)
.|+....++.....+...+....
T Consensus 69 ~~p~~~~f~~t~~m~~~~l~~~~ 91 (330)
T PF03595_consen 69 RHPVRSSFFPTFPMALMLLAAFI 91 (330)
T ss_dssp HSTTGGGGGGHHHHHHHHHHHHH
T ss_pred cCCcccchHHHHHHHHHHHHHHH
Confidence 36667666666655555544444
No 144
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=35.56 E-value=1.3e+02 Score=19.86 Aligned_cols=45 Identities=24% Similarity=0.391 Sum_probs=32.9
Q ss_pred hhhhHHHHhhhHhHHhhhcCCcccCcCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 017191 136 KILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSAS 206 (375)
Q Consensus 136 ~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~ 206 (375)
.++|..+.++|++++.+ .|| |....+++-...+......|+..+.
T Consensus 5 ~v~G~~lv~~Gii~~~l-PGp-------------------------G~l~i~~GL~iLa~ef~wArr~l~~ 49 (53)
T PF09656_consen 5 GVLGWVLVVAGIIMLPL-PGP-------------------------GLLVIFLGLAILATEFPWARRLLRR 49 (53)
T ss_pred hhHHHHHHHHHHHhhcC-CCC-------------------------cHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 67888999999988874 122 6667777777888887777776544
No 145
>MTH00057 ND6 NADH dehydrogenase subunit 6; Provisional
Probab=34.37 E-value=2.9e+02 Score=23.49 Aligned_cols=33 Identities=18% Similarity=0.217 Sum_probs=22.7
Q ss_pred HHHHHHHhcccccchhhhhHHHHHh--hhhheeec
Q 017191 289 TILAALLLHEEIYTGSLVGAIGVIL--GLYAVLWG 321 (375)
Q Consensus 289 ~~~~~l~~~e~~~~~~~iG~~lil~--g~~l~~~~ 321 (375)
-.+|..++.|-.-+.++.|..+.++ |.+...++
T Consensus 132 ~~iG~~Lyt~Y~l~fe~~s~lLLvAmIGAIvLa~~ 166 (186)
T MTH00057 132 EVLGRVLYTDYYYLFILASFILLVAMIGAIVLTHD 166 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4457778888888888888887764 44444443
No 146
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=34.35 E-value=4.6e+02 Score=25.77 Aligned_cols=43 Identities=16% Similarity=0.132 Sum_probs=23.5
Q ss_pred hhHHHHHHHHHHHHH-hcccccchhhhhHHHHHhhhhheeecccc
Q 017191 281 NPLCTVIVTILAALL-LHEEIYTGSLVGAIGVILGLYAVLWGKAK 324 (375)
Q Consensus 281 ~~~~pv~~~~~~~l~-~~e~~~~~~~iG~~lil~g~~l~~~~~~~ 324 (375)
...-++++.++..+. ....+ .....|.+++++|+.++.+.+++
T Consensus 395 ~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~y~~~~~~ 438 (473)
T TIGR00905 395 ALIVGVIACVYSIWLLYAAGL-KYLLLGFILYAPGIIFYGRARKE 438 (473)
T ss_pred HHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHHh
Confidence 334444554443333 33222 34557888888998776664443
No 147
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=33.82 E-value=35 Score=21.07 Aligned_cols=19 Identities=37% Similarity=0.819 Sum_probs=11.6
Q ss_pred hhHHHHHhhhhheeecccc
Q 017191 306 VGAIGVILGLYAVLWGKAK 324 (375)
Q Consensus 306 iG~~lil~g~~l~~~~~~~ 324 (375)
+|.++++.+.+++.+.+++
T Consensus 21 V~vI~~vl~~~l~~~~rR~ 39 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYRRK 39 (40)
T ss_pred hHHHHHHHHHHhheEEecc
Confidence 4566666777776555543
No 148
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=33.79 E-value=4.1e+02 Score=24.97 Aligned_cols=32 Identities=16% Similarity=0.052 Sum_probs=13.2
Q ss_pred HHHHHHHHhcccccchhhhhHHHHHhhhhhee
Q 017191 288 VTILAALLLHEEIYTGSLVGAIGVILGLYAVL 319 (375)
Q Consensus 288 ~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~ 319 (375)
..+.+++.-.-......+++.++.++++++..
T Consensus 355 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (399)
T PRK05122 355 GPLAGLVASWFGYPSIFLAAALAALLGLALTW 386 (399)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 33444443222233333444444455544443
No 149
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=32.91 E-value=6.2e+02 Score=26.84 Aligned_cols=18 Identities=17% Similarity=0.039 Sum_probs=8.5
Q ss_pred hhhHHHHHHHHHHhhccc
Q 017191 108 NLIPAITFVMASIVGLEK 125 (375)
Q Consensus 108 ~~~pi~~~ll~~l~~~e~ 125 (375)
...|.+..++..+++.|.
T Consensus 340 ~~lp~ll~ll~~~~lPES 357 (742)
T TIGR01299 340 CAFPCVFAIGALTFMPES 357 (742)
T ss_pred HHHHHHHHHHHHHHcCCC
Confidence 334555555544444444
No 150
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=32.39 E-value=14 Score=33.44 Aligned_cols=25 Identities=12% Similarity=0.284 Sum_probs=0.0
Q ss_pred hhHhHHHHHHHhccCCcchhhhhhh
Q 017191 258 SGVSFCVQAWCISKRGPLFSAMFNP 282 (375)
Q Consensus 258 ~~~~~~~~~~a~~~~~~~~~s~~~~ 282 (375)
-+++.++|.+.+++.+++.-+++.+
T Consensus 118 LaL~vW~Ym~lLr~~GAs~WtiLaF 142 (381)
T PF05297_consen 118 LALGVWFYMWLLRELGASFWTILAF 142 (381)
T ss_dssp -------------------------
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 3455677777899999987776543
No 151
>PHA03049 IMV membrane protein; Provisional
Probab=31.24 E-value=29 Score=23.90 Aligned_cols=19 Identities=32% Similarity=0.100 Sum_probs=12.8
Q ss_pred hhhhHHHHHhhhhheeecc
Q 017191 304 SLVGAIGVILGLYAVLWGK 322 (375)
Q Consensus 304 ~~iG~~lil~g~~l~~~~~ 322 (375)
-+++++++++|.+++-...
T Consensus 6 ~l~iICVaIi~lIvYgiYn 24 (68)
T PHA03049 6 ILVIICVVIIGLIVYGIYN 24 (68)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 3567788888877764433
No 152
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=29.77 E-value=85 Score=25.51 Aligned_cols=27 Identities=11% Similarity=0.213 Sum_probs=20.5
Q ss_pred hcccchhhHhhhhhhhHHHHHHHHHHh
Q 017191 95 LYLASSSMASAMGNLIPAITFVMASIV 121 (375)
Q Consensus 95 l~~~~~~~a~~l~~~~pi~~~ll~~l~ 121 (375)
+.--+.-.++.+.++.|+++.+++.++
T Consensus 69 i~EkslL~sA~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 69 IEEKSLLKSALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 344456678888999999998888765
No 153
>PF11714 Inhibitor_I53: Thrombin inhibitor Madanin ; InterPro: IPR021716 Members of this family are the peptidase inhibitor madanin proteins. These proteins were isolated from tick saliva [].
Probab=28.80 E-value=73 Score=22.13 Aligned_cols=18 Identities=6% Similarity=0.084 Sum_probs=8.3
Q ss_pred HHHhhhhheeeccccccc
Q 017191 310 GVILGLYAVLWGKAKDHF 327 (375)
Q Consensus 310 lil~g~~l~~~~~~~~~~ 327 (375)
.++++..+..+..+++.+
T Consensus 10 avVaSAvVMAyPe~dsAk 27 (78)
T PF11714_consen 10 AVVASAVVMAYPERDSAK 27 (78)
T ss_pred HHHHHHHHHhccccchhh
Confidence 344444444555444433
No 154
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=28.67 E-value=3.2e+02 Score=22.19 Aligned_cols=29 Identities=14% Similarity=0.203 Sum_probs=23.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 017191 178 NWLLGCLFLFASACCWSLWLILQVPVSAS 206 (375)
Q Consensus 178 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~ 206 (375)
......+..++++..|.-|...+||..+.
T Consensus 118 ~~i~~l~~~li~a~IwipYf~~S~RVK~T 146 (149)
T PF10754_consen 118 EAIRELLRSLIAAAIWIPYFLRSKRVKNT 146 (149)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHhhhh
Confidence 34567788899999999999999986543
No 155
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=27.61 E-value=56 Score=18.81 Aligned_cols=17 Identities=24% Similarity=0.045 Sum_probs=8.9
Q ss_pred cchhhhhHHHHHhhhhh
Q 017191 301 YTGSLVGAIGVILGLYA 317 (375)
Q Consensus 301 ~~~~~iG~~lil~g~~l 317 (375)
....++|.+++..+.++
T Consensus 11 ~~~~~~G~~l~~~~~~~ 27 (34)
T TIGR01167 11 SLLLLLGLLLLGLGGLL 27 (34)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44556677455444443
No 156
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=27.56 E-value=28 Score=27.89 Aligned_cols=28 Identities=21% Similarity=0.202 Sum_probs=20.6
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHhcccc
Q 017191 272 RGPLFSAMFNPLCTVIVTILAALLLHEEI 300 (375)
Q Consensus 272 ~~~~~~s~~~~~~pv~~~~~~~l~~~e~~ 300 (375)
-.....+.+.|+-|++.++++.++ +..+
T Consensus 65 ~~~~~aa~l~Y~lPll~li~g~~l-~~~~ 92 (135)
T PF04246_consen 65 SSLLKAAFLVYLLPLLALIAGAVL-GSYL 92 (135)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 344567888999999999998865 4443
No 157
>PF11381 DUF3185: Protein of unknown function (DUF3185); InterPro: IPR021521 Some members in this bacterial family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=26.63 E-value=32 Score=23.33 Aligned_cols=21 Identities=14% Similarity=0.374 Sum_probs=16.9
Q ss_pred hhhhHHHHHhhhhheeecccc
Q 017191 304 SLVGAIGVILGLYAVLWGKAK 324 (375)
Q Consensus 304 ~~iG~~lil~g~~l~~~~~~~ 324 (375)
+++|.++++.|+.+..++-+.
T Consensus 1 kiigi~Llv~GivLl~~G~~~ 21 (59)
T PF11381_consen 1 KIIGIALLVGGIVLLYFGYQA 21 (59)
T ss_pred CeeeehHHHHHHHHHHhhhhh
Confidence 468999999999998887543
No 158
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=26.11 E-value=4.8e+02 Score=25.56 Aligned_cols=15 Identities=20% Similarity=0.292 Sum_probs=7.6
Q ss_pred hhhHHHHHhhhhhee
Q 017191 305 LVGAIGVILGLYAVL 319 (375)
Q Consensus 305 ~iG~~lil~g~~l~~ 319 (375)
+.|+++++++++...
T Consensus 417 ~~~~~~~i~~~~~~~ 431 (476)
T PLN00028 417 LMGVMIIACTLPVAF 431 (476)
T ss_pred HHHHHHHHHHHHHHh
Confidence 445555555544443
No 159
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=25.75 E-value=98 Score=25.51 Aligned_cols=26 Identities=8% Similarity=0.118 Sum_probs=18.6
Q ss_pred cccchhhHhhhhhhhHHHHHHHHHHh
Q 017191 96 YLASSSMASAMGNLIPAITFVMASIV 121 (375)
Q Consensus 96 ~~~~~~~a~~l~~~~pi~~~ll~~l~ 121 (375)
.....-.++.+.++.|++..+.+..+
T Consensus 70 ~e~~llkaa~lvYllPLl~li~ga~l 95 (154)
T PRK10862 70 AEGSLLRSALLVYMTPLVGLFLGAAL 95 (154)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445567788888999888877654
No 160
>KOG4455 consensus Uncharacterized conserved protein [Function unknown]
Probab=25.46 E-value=3.1e+02 Score=20.99 Aligned_cols=24 Identities=21% Similarity=0.261 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
Q 017191 71 RSFSLIFFIALLGVTINQNTYFEGL 95 (375)
Q Consensus 71 ~~~~~~~~~g~~~~~~~~~~~~~al 95 (375)
+.+..-++.|+.++++.+.++ +++
T Consensus 83 ~~f~~~f~~Gl~tyVl~Wtf~-Y~l 106 (110)
T KOG4455|consen 83 NLFTESFLGGLTTYVLAWTFF-YGL 106 (110)
T ss_pred HHHHHHHhchHHHHHHHHHHH-hhh
Confidence 556777888888866666654 454
No 161
>PRK11715 inner membrane protein; Provisional
Probab=24.67 E-value=6.8e+02 Score=24.62 Aligned_cols=25 Identities=24% Similarity=0.206 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh
Q 017191 182 GCLFLFASACCWSLWLILQVPVSAS 206 (375)
Q Consensus 182 G~~~~l~a~~~~a~~~v~~k~~~~~ 206 (375)
+..+++.|+.|-..-..+.....++
T Consensus 358 ~~AYliAa~a~v~li~~Y~~~vl~~ 382 (436)
T PRK11715 358 TLAYLIAALACVLLIGFYLSAVLRS 382 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4444455555555555555544444
No 162
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=23.49 E-value=33 Score=27.06 Aligned_cols=14 Identities=36% Similarity=0.570 Sum_probs=5.4
Q ss_pred hHHHHHhhhhheee
Q 017191 307 GAIGVILGLYAVLW 320 (375)
Q Consensus 307 G~~lil~g~~l~~~ 320 (375)
|++++++.+.+..+
T Consensus 76 GvIg~Illi~y~ir 89 (122)
T PF01102_consen 76 GVIGIILLISYCIR 89 (122)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44444443333333
No 163
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=23.46 E-value=25 Score=27.57 Aligned_cols=26 Identities=4% Similarity=0.160 Sum_probs=12.5
Q ss_pred HHHhcccccchhh----hhHHHHHhhhhhe
Q 017191 293 ALLLHEEIYTGSL----VGAIGVILGLYAV 318 (375)
Q Consensus 293 ~l~~~e~~~~~~~----iG~~lil~g~~l~ 318 (375)
|+|--|..+.+.+ +.++++++|+++.
T Consensus 25 W~fR~ED~tpWNysiL~Ls~vvlvi~~~LL 54 (125)
T PF15048_consen 25 WFFRVEDATPWNYSILALSFVVLVISFFLL 54 (125)
T ss_pred HheecCCCCCcchHHHHHHHHHHHHHHHHH
Confidence 3444566665544 2333444555554
No 164
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=23.09 E-value=7.2e+02 Score=24.38 Aligned_cols=46 Identities=13% Similarity=0.099 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHH
Q 017191 181 LGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAI 230 (375)
Q Consensus 181 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 230 (375)
.|.+++.+.-+++-+.-++.| .+. ||++.....+......++.+++
T Consensus 300 YgiLFI~LTF~~fflfE~~~~---~~i-HpiQY~LVGlAl~lFYlLLLSl 345 (430)
T PF06123_consen 300 YGILFIGLTFLAFFLFELLSK---LRI-HPIQYLLVGLALVLFYLLLLSL 345 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHhc---Ccc-cHHHHHHHHHHHHHHHHHHHHH
Confidence 677776555555555555444 355 7888888777776666666666
No 165
>PRK09776 putative diguanylate cyclase; Provisional
Probab=23.06 E-value=1e+03 Score=26.12 Aligned_cols=20 Identities=5% Similarity=-0.140 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 017191 184 LFLFASACCWSLWLILQVPV 203 (375)
Q Consensus 184 ~~~l~a~~~~a~~~v~~k~~ 203 (375)
.+++...+...+...+.++.
T Consensus 73 ~~~~~~~~~~~~~~~ll~~~ 92 (1092)
T PRK09776 73 TWTTINLVEAVVGAVLLRKL 92 (1092)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 33333333333344444443
No 166
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=22.92 E-value=50 Score=22.86 Aligned_cols=20 Identities=20% Similarity=0.004 Sum_probs=13.8
Q ss_pred hhhhHHHHHhhhhheeeccc
Q 017191 304 SLVGAIGVILGLYAVLWGKA 323 (375)
Q Consensus 304 ~~iG~~lil~g~~l~~~~~~ 323 (375)
-+++++++++|.+++-...+
T Consensus 6 iLi~ICVaii~lIlY~iYnr 25 (68)
T PF05961_consen 6 ILIIICVAIIGLILYGIYNR 25 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 46788888888887654333
No 167
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=22.54 E-value=5.8e+02 Score=24.98 Aligned_cols=13 Identities=0% Similarity=0.051 Sum_probs=5.5
Q ss_pred hhHHHHHhhhhhe
Q 017191 306 VGAIGVILGLYAV 318 (375)
Q Consensus 306 iG~~lil~g~~l~ 318 (375)
++++++++.++++
T Consensus 180 ~a~~v~l~~i~~~ 192 (437)
T TIGR00939 180 TPCVVQLICIVCY 192 (437)
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444443
No 168
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=22.52 E-value=82 Score=25.12 Aligned_cols=23 Identities=17% Similarity=0.340 Sum_probs=17.0
Q ss_pred chhhHhhhhhhhHHHHHHHHHHh
Q 017191 99 SSSMASAMGNLIPAITFVMASIV 121 (375)
Q Consensus 99 ~~~~a~~l~~~~pi~~~ll~~l~ 121 (375)
....++++.+..|++..+++.++
T Consensus 66 ~~~~aa~l~Y~lPll~li~g~~l 88 (135)
T PF04246_consen 66 SLLKAAFLVYLLPLLALIAGAVL 88 (135)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567778888888888877764
No 169
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=21.88 E-value=7.4e+02 Score=24.04 Aligned_cols=9 Identities=0% Similarity=-0.289 Sum_probs=4.0
Q ss_pred HhccCCcch
Q 017191 268 CISKRGPLF 276 (375)
Q Consensus 268 a~~~~~~~~ 276 (375)
.....++..
T Consensus 374 ~~~~~p~~~ 382 (467)
T PRK09556 374 AVGFVPKKA 382 (467)
T ss_pred HHhhcchhh
Confidence 344454433
No 170
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=21.80 E-value=3.1e+02 Score=24.49 Aligned_cols=31 Identities=13% Similarity=0.021 Sum_probs=23.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhhhC
Q 017191 177 ENWLLGCLFLFASACCWSLWLILQVPVSASY 207 (375)
Q Consensus 177 ~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~ 207 (375)
.....|.+++....+.||.=....|+..+..
T Consensus 124 ~~~~lG~vc~~~nI~~~~sPL~~m~~VIktk 154 (243)
T KOG1623|consen 124 RVSVLGIVCAVFNISMFAAPLSVIRKVIKTK 154 (243)
T ss_pred eeeeeehhhhhhhHHhhhccHHhhhhheecC
Confidence 3556899999999988888777777665554
No 171
>COG4147 DhlC Predicted symporter [General function prediction only]
Probab=21.39 E-value=6e+02 Score=25.36 Aligned_cols=139 Identities=12% Similarity=0.114 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhH
Q 017191 181 LGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGV 260 (375)
Q Consensus 181 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 260 (375)
.|..+...+++..=+|.-..|+-..+. +++...-+......++...+....+ . +...-..|...+..+...-++
T Consensus 361 aGL~l~iasavsHDiY~~vik~~ase~-~~v~vaRi~~v~~~vva~~lgi~~~----g-nVaflVa~AF~lAaSa~fPvi 434 (529)
T COG4147 361 AGLLLVIASAVSHDLYAMVIKKGATEK-KEVRVARIAVVILGVVAILLGILPP----G-NVAFLVALAFALAASANFPVI 434 (529)
T ss_pred hhHHHHHHHHHHhHHHHHHhCCCCCcc-ceehhHHHHHHHHHHHHHHheecCC----c-cHHHHHHHHHHHHHHcccchh
Confidence 344455555555556665555544333 4555555555444444333333211 1 111111222222222222333
Q ss_pred hHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHh------------cccccchhhhhHHHHHhhhhheeeccccc
Q 017191 261 SFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLL------------HEEIYTGSLVGAIGVILGLYAVLWGKAKD 325 (375)
Q Consensus 261 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~------------~e~~~~~~~iG~~lil~g~~l~~~~~~~~ 325 (375)
-+.+|-+-..+.++..-........+.-++++-.++ +-+++.....|+.+-+.+.++...-.+..
T Consensus 435 vlglfWKr~n~~GAi~G~~~GL~~tlv~i~l~~~i~~~~~~~~~~~~~~~~~~~~g~~sipv~F~~~~ivSllt~~~ 511 (529)
T COG4147 435 VLGLFWKRLNTAGAIAGMLLGLIVTLVLIILSPTIWVVILGHPGFGWAGFPYEGPGLFSIPVGFLGAWIVSLLTKPP 511 (529)
T ss_pred hHHHHHhhccHHhHHHHHHHHHHHHHHHHHhCccccccccCccccccccCCCCCcchhhhhHHHHHhHheeccCCCC
Confidence 344455555555655555555555555555544332 34567778888888888877776654433
No 172
>COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) [Signal transduction mechanisms]
Probab=20.44 E-value=3.2e+02 Score=22.71 Aligned_cols=62 Identities=6% Similarity=-0.034 Sum_probs=41.6
Q ss_pred hhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcc-cccchhhhhHHHHHhhhhhee
Q 017191 258 SGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHE-EIYTGSLVGAIGVILGLYAVL 319 (375)
Q Consensus 258 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e-~~~~~~~iG~~lil~g~~l~~ 319 (375)
+.-++..|...-....+-....+..++-+.....+.+++++ .+..-.++|..+-++.+++..
T Consensus 61 ~iSa~lvW~~~~~~~~~~~~~~ly~~ql~ln~awspiff~l~~l~~a~i~~lll~~~vl~l~i 123 (161)
T COG3476 61 GISAYLVWEKGPGQGTSWLLMFLYLLQLILNFAWSPIFFGLRSLGAALIIILLLWIAVLVLTI 123 (161)
T ss_pred HHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHH
Confidence 34456666555444444444555568999999999999998 677777777777666655543
No 173
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=20.31 E-value=6.6e+02 Score=22.84 Aligned_cols=17 Identities=12% Similarity=0.069 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHhhhhC
Q 017191 191 CCWSLWLILQVPVSASY 207 (375)
Q Consensus 191 ~~~a~~~v~~k~~~~~~ 207 (375)
+.+.+......+..++.
T Consensus 41 ~~~~~~~~~~g~l~dr~ 57 (379)
T TIGR00881 41 IAYGISKFVMGSVSDRS 57 (379)
T ss_pred HHHHhhhhhhhHHHHhh
Confidence 33333333333344343
Done!