Your job contains 1 sequence.
>017194
MTDAEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGP
VTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLAC
ADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR
PNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESE
LNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSM
FGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENL
VVCDTSKVVKVYSIS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017194
(375 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2171953 - symbol:AT5G45760 "AT5G45760" species... 1008 1.1e-101 1
MGI|MGI:1916230 - symbol:Wdr53 "WD repeat domain 53" spec... 278 6.8e-30 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 115 3.0e-10 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 99 1.4e-07 2
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 97 1.5e-07 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 95 3.4e-07 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 97 3.6e-07 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 118 4.1e-07 2
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 99 4.4e-07 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 99 5.8e-07 2
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 97 6.1e-07 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 98 7.6e-07 2
POMBASE|SPAC6B12.15 - symbol:cpc2 "RACK1 ortholog Cpc2" s... 139 8.7e-07 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 103 3.6e-06 2
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 103 3.6e-06 2
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 108 6.8e-06 2
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 107 8.0e-06 2
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 108 9.1e-06 2
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 108 9.1e-06 2
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 108 9.1e-06 2
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 108 9.3e-06 2
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 108 9.4e-06 2
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 88 1.1e-05 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 112 1.1e-05 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 101 1.3e-05 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 90 2.8e-05 2
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 125 3.2e-05 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 90 3.5e-05 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 90 3.5e-05 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 90 3.5e-05 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 90 3.5e-05 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 90 3.5e-05 2
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 109 3.7e-05 2
TAIR|locus:2194060 - symbol:ATARCA "AT1G18080" species:37... 116 5.4e-05 2
DICTYBASE|DDB_G0287817 - symbol:wdr24 "WD40 repeat-contai... 121 5.4e-05 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 90 5.6e-05 2
ZFIN|ZDB-GENE-041111-211 - symbol:wdfy2 "WD repeat and FY... 108 6.4e-05 2
FB|FBgn0263933 - symbol:ebi "ebi" species:7227 "Drosophil... 73 0.00011 3
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 97 0.00011 2
RGD|1307480 - symbol:Wdr3 "WD repeat domain 3" species:10... 95 0.00012 3
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 90 0.00014 2
DICTYBASE|DDB_G0278285 - symbol:copB2 "coatomer protein c... 95 0.00016 2
MGI|MGI:2443143 - symbol:Wdr3 "WD repeat domain 3" specie... 97 0.00018 3
UNIPROTKB|I3LI24 - symbol:GNB2L1 "Guanine nucleotide-bind... 112 0.00022 2
WB|WBGene00006773 - symbol:unc-37 species:6239 "Caenorhab... 102 0.00023 2
UNIPROTKB|O02482 - symbol:unc-37 "Transcription factor un... 102 0.00023 2
UNIPROTKB|G4MNI3 - symbol:MGG_05616 "Pre-mRNA-splicing fa... 99 0.00024 2
UNIPROTKB|E1BM03 - symbol:WDR3 "Uncharacterized protein" ... 92 0.00025 3
UNIPROTKB|E1BV27 - symbol:TBL1X "Uncharacterized protein"... 84 0.00025 3
UNIPROTKB|B8YE10 - symbol:TBL1Y "Transducin (Beta)-like 1... 81 0.00027 3
TAIR|locus:2161253 - symbol:MSI1 "MULTICOPY SUPRESSOR OF ... 119 0.00028 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 95 0.00028 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 85 0.00029 2
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 99 0.00033 2
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 100 0.00033 2
FB|FBgn0030365 - symbol:Tango4 "Transport and Golgi organ... 99 0.00033 2
UNIPROTKB|D6RFX4 - symbol:GNB2L1 "Guanine nucleotide-bind... 111 0.00034 1
UNIPROTKB|G8JKX8 - symbol:COPB2 "Coatomer subunit beta'" ... 96 0.00037 2
FB|FBgn0263979 - symbol:Caf1 "Chromatin assembly factor 1... 113 0.00037 2
UNIPROTKB|E1BQV9 - symbol:KATNB1 "Katanin p80 WD40 repeat... 111 0.00038 2
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 100 0.00043 2
FB|FBgn0036354 - symbol:Poc1 "Proteome of centrioles 1" s... 81 0.00044 2
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 118 0.00045 1
MGI|MGI:1354962 - symbol:Copb2 "coatomer protein complex,... 96 0.00050 2
RGD|628746 - symbol:Copb2 "coatomer protein complex, subu... 96 0.00050 2
UNIPROTKB|P35605 - symbol:COPB2 "Coatomer subunit beta'" ... 96 0.00050 2
UNIPROTKB|E2R667 - symbol:COPB2 "Uncharacterized protein"... 96 0.00050 2
UNIPROTKB|P35606 - symbol:COPB2 "Coatomer subunit beta'" ... 96 0.00050 2
UNIPROTKB|F1SL54 - symbol:COPB2 "Uncharacterized protein"... 96 0.00050 2
UNIPROTKB|Q7ZYQ6 - symbol:dcaf13 "DDB1- and CUL4-associat... 114 0.00050 2
UNIPROTKB|E1C016 - symbol:COPB2 "Uncharacterized protein"... 96 0.00051 2
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 99 0.00055 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 99 0.00055 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 99 0.00055 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 99 0.00055 2
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 99 0.00055 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 99 0.00055 2
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 99 0.00055 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 99 0.00055 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 99 0.00055 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 99 0.00055 2
UNIPROTKB|B4DZI8 - symbol:COPB2 "Coatomer protein complex... 96 0.00059 2
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 110 0.00060 2
ZFIN|ZDB-GENE-041010-198 - symbol:thoc6 "THO complex 6 ho... 114 0.00063 1
UNIPROTKB|F1P0F4 - symbol:KATNB1 "Katanin p80 WD40 repeat... 109 0.00063 2
UNIPROTKB|F1SAY9 - symbol:WDR3 "Uncharacterized protein" ... 89 0.00066 3
UNIPROTKB|C9JYB3 - symbol:WDHD1 "WD repeat and HMG-box DN... 106 0.00066 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 114 0.00067 1
UNIPROTKB|F1P0W9 - symbol:NEDD1 "Uncharacterized protein"... 118 0.00070 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 114 0.00072 1
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 109 0.00077 2
MGI|MGI:1913972 - symbol:Spag16 "sperm associated antigen... 92 0.00077 2
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 109 0.00079 2
UNIPROTKB|Q5R654 - symbol:RBBP7 "Histone-binding protein ... 109 0.00079 2
POMBASE|SPAC29A4.18 - symbol:prw1 "Clr6 histone deacetyla... 115 0.00080 1
ZFIN|ZDB-GENE-040426-1851 - symbol:wdr61 "WD repeat domai... 102 0.00082 2
SGD|S000002535 - symbol:MTC5 "Subunit of the SEA (Seh1-as... 120 0.00082 1
TAIR|locus:2008159 - symbol:RACK1B_AT "AT1G48630" species... 113 0.00082 1
SGD|S000006072 - symbol:PRP46 "Member of the NineTeen Com... 104 0.00082 2
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 113 0.00096 1
WARNING: Descriptions of 10 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2171953 [details] [associations]
symbol:AT5G45760 "AT5G45760" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 IPI:IPI00524851 RefSeq:NP_568648.1
UniGene:At.29996 ProteinModelPortal:F4KEM4 SMR:F4KEM4
EnsemblPlants:AT5G45760.1 GeneID:834615 KEGG:ath:AT5G45760
OMA:HTSICSS Uniprot:F4KEM4
Length = 360
Score = 1008 (359.9 bits), Expect = 1.1e-101, P = 1.1e-101
Identities = 191/279 (68%), Positives = 227/279 (81%)
Query: 1 MTDAEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGP 60
M A +PR+LRGHK+TATCCIASRDRPG V +SGEDGCICWFDLR KDVQ + DVG P
Sbjct: 1 MATAMEEPRKLRGHKSTATCCIASRDRPGIVLTSGEDGCICWFDLRCKDVQFIIDVGTEP 60
Query: 61 VTSLCFKSGNEDIIYVSSGKEVKSFDVHM--PASWRPLESYNYNKEEINQIVCNPKSSFL 118
V+SLCFK+GNE+I+Y S G E+KSFDVH SW+PLESYNYNK+E+NQ+VCN +SSFL
Sbjct: 61 VSSLCFKTGNENILYASCGNEIKSFDVHTLSATSWKPLESYNYNKDEVNQVVCNGRSSFL 120
Query: 119 ACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
A ADD GDVKIID+ Q CLYK+LRAGH+SICSSVQFIPW+PWEVI+GGLDSKLV+WDFSK
Sbjct: 121 ASADDSGDVKIIDLGQKCLYKTLRAGHTSICSSVQFIPWRPWEVITGGLDSKLVLWDFSK 180
Query: 179 GRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIE 238
GR KI++FG NN N+GQC NPAFVH+IAIP+ DM+DK +KIC VA+GDG+V++INIE
Sbjct: 181 GRSQKIIDFGSDTNN-NSGQCLNPAFVHSIAIPEMDMVDKLDKICAVARGDGIVNLINIE 239
Query: 239 SELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGG 277
SEL SR K T+ KGS S+S N+ + LD S G
Sbjct: 240 SEL--SR-KGTSS--KGSSSSSSNNV--VKRVCLDYSVG 271
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 67/144 (46%), Positives = 86/144 (59%)
Query: 234 VIN-IESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAA 292
++N I E +SR K T+ KGS S+S N+ KR+ LDYSVGGH +A
Sbjct: 232 IVNLINIESELSR-KGTSS--KGSSSSSSNNVV------------KRVCLDYSVGGHNSA 276
Query: 293 ASCVAFSMFGERGKYLISGGNDKLVKVWDCSR-FQGVQTSXXXXXXXXXXXXXXXXXWLC 351
SCVAFS+F E+G++LISGGNDK VK+WDC + + WLC
Sbjct: 277 VSCVAFSLFQEKGRFLISGGNDKTVKIWDCFKCLDPNNNNNNSDLLHLNINLSKKVNWLC 336
Query: 352 TTPTESENLVVCDTSKVVKVYSIS 375
T ++SENLVVCDT++VVKVYSIS
Sbjct: 337 TNQSDSENLVVCDTTRVVKVYSIS 360
>MGI|MGI:1916230 [details] [associations]
symbol:Wdr53 "WD repeat domain 53" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916230 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AK005105
EMBL:BC028850 IPI:IPI00119193 RefSeq:NP_001172091.1
RefSeq:NP_081174.1 UniGene:Mm.159860 ProteinModelPortal:Q9DB94
SMR:Q9DB94 STRING:Q9DB94 PRIDE:Q9DB94 Ensembl:ENSMUST00000023474
Ensembl:ENSMUST00000178573 GeneID:68980 KEGG:mmu:68980
UCSC:uc007yym.2 CTD:348793 GeneTree:ENSGT00390000011073
HOGENOM:HOG000036744 HOVERGEN:HBG056769 InParanoid:Q9DB94
OMA:VAFRPQR OrthoDB:EOG4J3WH7 NextBio:328343 Bgee:Q9DB94
CleanEx:MM_WDR53 Genevestigator:Q9DB94
GermOnline:ENSMUSG00000022787 Uniprot:Q9DB94
Length = 358
Score = 278 (102.9 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 69/204 (33%), Positives = 108/204 (52%)
Query: 13 GHKATATCCIASRDRPGFVASSGEDG-CICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNE 71
GH ++ C A++D G VAS GE G + W + + + + G VTS+ F +
Sbjct: 8 GHSSSILCLNANKD--GLVASGGEGGDLVAWGEDGTPLGHMQLE-GADDVTSVLFSASCP 64
Query: 72 DIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIID 131
+Y S G+ + DV L+ ++ N+EEIN + N S LA ADD G +KI+D
Sbjct: 65 TKLYASHGETISVLDVRSLKG--SLDHFHVNEEEINCLSLNETESLLASADDSGAIKILD 122
Query: 132 IRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFG--- 188
+ + + +SL+ HS+ICSSV F P +P ++S GLD ++++W K RP I N
Sbjct: 123 LEKKKVTRSLKR-HSNICSSVAFRPQRPQSLVSCGLDMQVMLWSLQKARPVWITNLQEDE 181
Query: 189 LPENNG--NAGQCYNPAFVHAIAI 210
E G G+ NPA H++++
Sbjct: 182 TEETEGPQTPGRLLNPALAHSVSV 205
Score = 68 (29.0 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 277 GKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCS-RFQGVQTS 331
G + + GHT S V F L++GGND +++WD S + + +Q S
Sbjct: 228 GVKCERELGFKGHTLGVSQVCFL---PESSLLLTGGNDGRIRLWDVSGKMEKLQKS 280
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 115 (45.5 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 44/174 (25%), Positives = 69/174 (39%)
Query: 11 LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGN 70
L GHK A C+ VAS D +C + K V V S+ F S
Sbjct: 58 LVGHK-DAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDG 116
Query: 71 EDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVC---NPKSSFLACADDGGDV 127
+ ++ S K +K + VH + L S + + IN + C +P +A A D V
Sbjct: 117 QSLVTASDDKTIKVWTVHRQ---KFLFSLS---QHINWVRCARFSPDGRLIASASDDKTV 170
Query: 128 KIID-IRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
K+ D + C++ H + V+F P + + G D + +WD R
Sbjct: 171 KLWDKTSRECIHSFCE--HGGFANHVEFHPSGTC-IAAAGTDKTVKVWDVRMNR 221
Score = 99 (39.9 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 320
D+ ++ILD G+ L Y++ GH A+CVAFS G+ + SGG+D+ V VW
Sbjct: 251 DSTLKILDLLEGRLL---YTLHGHQGPATCVAFSRTGD---FFASGGSDEQVMVW 299
Score = 62 (26.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 279 RLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
RL Y V HTAA + ++F G YLI+ ND +K+ D
Sbjct: 221 RLLQHYQV--HTAAVNSLSFH---PSGNYLITASNDSTLKILD 258
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 99 (39.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 27/63 (42%), Positives = 36/63 (57%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325
D+ ++ILD G+ L Y++ GH A+ VAFS GE Y SGG+D+ V VW S F
Sbjct: 250 DSTLKILDLMEGRLL---YTLHGHQGPATTVAFSRTGE---YFASGGSDEQVMVWK-SNF 302
Query: 326 QGV 328
V
Sbjct: 303 DTV 305
Score = 91 (37.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 43/176 (24%), Positives = 68/176 (38%)
Query: 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCI-CWFDLRSKDVQLVTDVGNGPVTS 63
+++ R GHK TC S +AS D + W K V V S
Sbjct: 51 QSRAYRFTGHKDAVTCVNFSPSGH-LLASGSRDKTVRIWVP-NVKGESTVFRAHTATVRS 108
Query: 64 LCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVC---NPKSSFLAC 120
+ F S + ++ S K VK + H R L S + IN + C +P +
Sbjct: 109 VHFCSDGQLLVTASDDKTVKVWSTHRQ---RFLFSLT---QHINWVRCAKFSPDGRLIVS 162
Query: 121 ADDGGDVKIID-IRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWD 175
A D VK+ D + C++ H + V F P + + G+D+ + +WD
Sbjct: 163 ASDDKTVKLWDKTSRECVHSYCE--HGGFVTYVDFHPSGTC-IAAAGMDNTVKVWD 215
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 97 (39.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 320
D+ ++ILD G+ L Y++ GH A+ VAFS GE Y SGG+D+ V VW
Sbjct: 250 DSTLKILDLMEGRLL---YTLHGHQGPATTVAFSRTGE---YFASGGSDEQVMVW 298
Score = 96 (38.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 43/176 (24%), Positives = 68/176 (38%)
Query: 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCI-CWFDLRSKDVQLVTDVGNGPVTS 63
+++ R GHK TC S +AS D + W K V V S
Sbjct: 51 QSRAYRFTGHKDAVTCVNFSPSGH-LLASGSRDKTVRIWVP-NVKGESTVFRAHTATVRS 108
Query: 64 LCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVC---NPKSSFLAC 120
+ F S + ++ S K VK + H R L S + IN + C +P +
Sbjct: 109 VHFCSDGQSLVTASDDKTVKVWSTHRQ---RFLFSLT---QHINWVRCAKFSPDGRLIVS 162
Query: 121 ADDGGDVKIID-IRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWD 175
A D VK+ D + C++ H + V F P + + G+D+ + +WD
Sbjct: 163 ASDDKTVKLWDKTSRECIHSYCE--HGGFVTYVDFHPSGTC-IAAAGMDNTVKVWD 215
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 95 (38.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325
D+ ++ILD G+ L Y++ GH +ASCV+FS G++ S G+D+ V VW + F
Sbjct: 249 DSTLKILDLLEGRLL---YTLHGHQGSASCVSFSRSGDQ---FASAGSDQQVMVWR-TNF 301
Query: 326 QGVQTS 331
V S
Sbjct: 302 DSVDYS 307
Score = 95 (38.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 39/176 (22%), Positives = 68/176 (38%)
Query: 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSL 64
+++ R GHK TC + +ASS D + + K ++ G V S+
Sbjct: 50 QSRAYRFTGHKDAVTC-VQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSV 108
Query: 65 CFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVC---NPKSSFLACA 121
CF + + ++ S + +K + VH L +N N + C +P +
Sbjct: 109 CFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHN------NWVRCARFSPDGQLMVSV 162
Query: 122 DDGGDVKIIDIRQHCLYKSL--RAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWD 175
D VK+ D L + G+SS V F P + + D+ + +WD
Sbjct: 163 SDDRTVKLWDASSRQLIHTFCEPGGYSSY---VDFHPSSTC-IATASSDNTVRVWD 214
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 97 (39.2 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 320
D+ ++ILD G+ L Y++ GH A+ VAFS GE Y SGG+D+ V VW
Sbjct: 281 DSTLKILDLMEGRLL---YTLHGHQGPATTVAFSRTGE---YFASGGSDEQVMVW 329
Score = 91 (37.1 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 42/176 (23%), Positives = 68/176 (38%)
Query: 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCI-CWFDLRSKDVQLVTDVGNGPVTS 63
+++ R GHK TC S +AS D + W K V V S
Sbjct: 82 QSRAYRFTGHKDAVTCVNFSPSGH-LLASGSRDKTVRIWVP-NIKGESTVFRAHTATVRS 139
Query: 64 LCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVC---NPKSSFLAC 120
+ F S + + S K +K + H + L S + + IN + C +P +
Sbjct: 140 VHFCSDGQSFVTASDDKTIKVWSTHRQ---KFLFSLS---QHINWVRCAKFSPDGRLIVS 193
Query: 121 ADDGGDVKIID-IRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWD 175
A D VK+ D + C++ H + V F P V + G+D+ + +WD
Sbjct: 194 ASDDKTVKLWDKTSRECVHSYCE--HGGFVTYVDFHPSGTC-VAAAGMDNTVKVWD 246
Score = 67 (28.6 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 37/170 (21%), Positives = 70/170 (41%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFK- 67
R +GH+ TC S + +AS D C+ + ++ + VT + F
Sbjct: 44 RHFKGHRDAVTCVDFSFNMKQ-LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP 102
Query: 68 SGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQI-VCNPKSSFLACADDGGD 126
SG+ ++SG K+ + +P + + + + C+ SF+ +DD
Sbjct: 103 SGH----LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK-T 157
Query: 127 VKIIDI-RQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWD 175
+K+ RQ L+ SL + H + +F P ++S D + +WD
Sbjct: 158 IKVWSTHRQKFLF-SL-SQHINWVRCAKFSP-DGRLIVSASDDKTVKLWD 204
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 118 (46.6 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 30/131 (22%), Positives = 65/131 (49%)
Query: 58 NGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHM---PASWRPLESYNYNKEEINQIVCNPK 114
N V+S+ F S + S+ K ++++ ++ P + P++ + ++ I+ + +
Sbjct: 24 NRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIA-EPVQEFTGHENGISDVAFSSD 82
Query: 115 SSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMW 174
+ F+ A D +K+ D+ L K+L GH++ V F P ++SG D + +W
Sbjct: 83 ARFIVSASDDKTLKLWDVETGSLIKTL-IGHTNYAFCVNFNPQSNM-IVSGSFDETVRIW 140
Query: 175 DFSKGRPNKIV 185
D + G+ K++
Sbjct: 141 DVTTGKCLKVL 151
Score = 65 (27.9 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 288 GHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
GH A C++ + GK ++SG D V +W+
Sbjct: 238 GHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWE 271
Score = 56 (24.8 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 296 VAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 330
V+F F GK+++ G D +++W+ S + ++T
Sbjct: 201 VSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKT 235
Score = 39 (18.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 288 GHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 320
GHT VA + SG DK V++W
Sbjct: 283 GHTETVMNVACH---PTENLIASGSLDKTVRIW 312
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 99 (39.9 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 32/104 (30%), Positives = 49/104 (47%)
Query: 223 CVVAKG-DGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNI-----RDAEMEILDQSG 276
C+ A G D V V ++ + + + + + G N D+ ++ILD
Sbjct: 163 CIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLME 222
Query: 277 GKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 320
G+ L Y++ GH A+ VAFS GE Y SGG+D+ V VW
Sbjct: 223 GRLL---YTLHGHQGPATTVAFSRTGE---YFASGGSDEQVMVW 260
Score = 88 (36.0 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 42/176 (23%), Positives = 68/176 (38%)
Query: 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCI-CWFDLRSKDVQLVTDVGNGPVTS 63
+++ R GHK TC S +AS D + W K V V S
Sbjct: 13 QSRAYRFTGHKDAVTCVNFSPSGH-LLASGSRDKTVRIWVP-NVKGESTVFRAHTATVRS 70
Query: 64 LCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVC---NPKSSFLAC 120
+ F S + + S K VK + H + L S + + IN + C +P +
Sbjct: 71 VHFCSDGQSFVTASDDKTVKVWATHRQ---KFLFSLS---QHINWVRCAKFSPDGRLIVS 124
Query: 121 ADDGGDVKIID-IRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWD 175
A D VK+ D + C++ H + V F P + + G+D+ + +WD
Sbjct: 125 ASDDKTVKLWDKSSRECVHSYCE--HGGFVTYVDFHPSGTC-IAAAGMDNTVKVWD 177
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 99 (39.9 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 32/104 (30%), Positives = 49/104 (47%)
Query: 223 CVVAKG-DGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNI-----RDAEMEILDQSG 276
C+ A G D V V ++ + + + + + G N D+ ++ILD
Sbjct: 201 CIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLME 260
Query: 277 GKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 320
G+ L Y++ GH A+ VAFS GE Y SGG+D+ V VW
Sbjct: 261 GRLL---YTLHGHQGPATTVAFSRTGE---YFASGGSDEQVMVW 298
Score = 88 (36.0 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 42/176 (23%), Positives = 68/176 (38%)
Query: 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCI-CWFDLRSKDVQLVTDVGNGPVTS 63
+++ R GHK TC S +AS D + W K V V S
Sbjct: 51 QSRAYRFTGHKDAVTCVNFSPSGH-LLASGSRDKTVRIWVP-NVKGESTVFRAHTATVRS 108
Query: 64 LCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVC---NPKSSFLAC 120
+ F S + + S K VK + H + L S + + IN + C +P +
Sbjct: 109 VHFCSDGQSFVTASDDKTVKVWATHRQ---KFLFSLS---QHINWVRCAKFSPDGRLIVS 162
Query: 121 ADDGGDVKIID-IRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWD 175
A D VK+ D + C++ H + V F P + + G+D+ + +WD
Sbjct: 163 ASDDKTVKLWDKSSRECVHSYCE--HGGFVTYVDFHPSGTC-IAAAGMDNTVKVWD 215
Score = 68 (29.0 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 39/172 (22%), Positives = 71/172 (41%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFK- 67
R +GH+ TC S + +AS D C+ + ++ + VT + F
Sbjct: 13 RHFKGHRDAVTCVDFSINTKQ-LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 68 SGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQI-VCNPKSSFLACADDGGD 126
SG+ ++SG K+ + +P + + + + C+ SF+ +DD
Sbjct: 72 SGH----LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK-T 126
Query: 127 VKI-IDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFS 177
VK+ RQ L+ SL + H + +F P ++S D + +WD S
Sbjct: 127 VKVWATHRQKFLF-SL-SQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKS 175
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 97 (39.2 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 320
D+ ++ILD G+ L Y++ GH A+ VAFS GE Y SGG+D+ V VW
Sbjct: 250 DSTLKILDLMEGRLL---YTLHGHQGPATTVAFSRTGE---YFASGGSDEQVMVW 298
Score = 90 (36.7 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 42/176 (23%), Positives = 67/176 (38%)
Query: 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCI-CWFDLRSKDVQLVTDVGNGPVTS 63
+ + R GHK TC S +AS D + W K V V S
Sbjct: 51 QTRAYRFAGHKDAVTCVNFSPSGH-LLASGSRDKTVRIWVP-NVKGESTVFRAHTATVRS 108
Query: 64 LCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVC---NPKSSFLAC 120
+ F S + + S K VK + H + L S + + IN + C +P +
Sbjct: 109 VHFCSDGQSFVTASDDKTVKVWSTHRQ---KFLFSLS---QHINWVRCAKFSPDGRLIVS 162
Query: 121 ADDGGDVKIID-IRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWD 175
A D VK+ D + C++ H + V F P + + G+D+ + +WD
Sbjct: 163 ASDDKTVKLWDKTSRECVHSYCE--HGGFVTYVDFHPSGTC-IAAAGMDNTVKVWD 215
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 98 (39.6 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 27/63 (42%), Positives = 36/63 (57%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325
D+ ++ILD G+ L Y++ GH A+ VAFS GE Y SGG+D+ V VW S F
Sbjct: 250 DSTLKILDLMEGRLL---YTLHGHQGPATTVAFSRTGE---YFASGGSDEQVMVWK-SNF 302
Query: 326 QGV 328
V
Sbjct: 303 DVV 305
Score = 88 (36.0 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 41/176 (23%), Positives = 68/176 (38%)
Query: 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCI-CWFDLRSKDVQLVTDVGNGPVTS 63
+++ R GHK TC S +AS D + W K V V S
Sbjct: 51 QSRAYRFAGHKDAVTCVNFSPSGH-LLASGSRDKTVRIWIP-NVKGESTVFRAHTATVRS 108
Query: 64 LCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVC---NPKSSFLAC 120
+ F S + ++ S K VK + H + L S + + IN + C +P +
Sbjct: 109 VHFCSDGQSLVTASDDKTVKVWSTHRQ---KFLFSLS---QHINWVRCARFSPDGRLIVS 162
Query: 121 ADDGGDVKIID-IRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWD 175
A D VK+ D + C++ H + V F P + + +D+ + +WD
Sbjct: 163 ASDDKTVKLWDKTSRECVHSYCE--HGGFVTYVDFHPSGTC-IAAASMDNTVKVWD 215
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 139 (54.0 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 56/234 (23%), Positives = 101/234 (43%)
Query: 144 GHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENN--GNAGQCYN 201
GHS +S+ P P ++SG D +++W+ + VN+G+ + G++ +
Sbjct: 13 GHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDD----VNYGVAQRRLTGHSHFVSD 68
Query: 202 PAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESE-LNISRSKSTTKPLKGSQSTS 260
A + DKT ++ + KG+ + S+ L++S S + + GS
Sbjct: 69 CALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGS---- 124
Query: 261 KVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 320
RD ++I + G + + + GGH+ SCV FS + + +S G DK VKVW
Sbjct: 125 ----RDKTIKIWNIIGNCKYTI--TDGGHSDWVSCVRFSPNPDNLTF-VSAGWDKAVKVW 177
Query: 321 DCSRFQGVQTSXXXXXXXXXXXXXXXXXWLCTTPTESENLVVCDTSKVVKVYSI 374
D F ++TS LC + L++ D ++ +YS+
Sbjct: 178 DLETFS-LRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSL 230
Score = 122 (48.0 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 71/328 (21%), Positives = 131/328 (39%)
Query: 11 LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQL-VTD---VGNGPVTSLCF 66
L GH T + + P + S D I ++L DV V G+ S C
Sbjct: 11 LEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCA 70
Query: 67 KSGNEDIIYVSS-GKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGG 125
S + +S K ++ +D+ + ++ + +P + +
Sbjct: 71 LSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHT---SDVLSVSISPDNRQVVSGSRDK 127
Query: 126 DVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEV--ISGGLDSKLVMWDFSKGRPNK 183
+KI +I +C Y GHS S V+F P P + +S G D + +WD
Sbjct: 128 TIKIWNIIGNCKYTITDGGHSDWVSCVRFSP-NPDNLTFVSAGWDKAVKVWDLE------ 180
Query: 184 IVNFGLPENN-GNAGQCYNPAFVHAIAI-PDADMLDKTNKICVVAKGD--GVVDVINIES 239
F L ++ G+ G +V A+ I PD + + + D + ++E+
Sbjct: 181 --TFSLRTSHYGHTG------YVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEA 232
Query: 240 ELNISRSK-STTKPLKGSQSTSKVNIRDAE-MEILDQSGGKRLHLDY-SVGGHTAAASCV 296
+ NI+ S + + + S + I D E E +D+ L +D+ VG ++ C+
Sbjct: 233 KANINALVFSPNRYWLCAATGSSIRIFDLETQEKVDE-----LTVDFVGVGKKSSEPECI 287
Query: 297 AFSMFGERGKYLISGGNDKLVKVWDCSR 324
+ + + G+ L SG D L++VW ++
Sbjct: 288 SLT-WSPDGQTLFSGWTDNLIRVWQVTK 314
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 103 (41.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 42/175 (24%), Positives = 75/175 (42%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKS 68
R L GHK S D V S+ +D + F++ + + N V F
Sbjct: 123 RTLTGHKLGVNDIAWSSDSR-CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNP 181
Query: 69 GNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVK 128
+ ++ S + V+ +DV + L +++ + ++ + N S +A G V+
Sbjct: 182 QSSLVVSGSFDESVRIWDVKTGMCIKTLPAHS---DPVSAVSFNRDGSLIASGSYDGLVR 238
Query: 129 IIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNK 183
I D K+L + + V+F P + +++ LDS L +WDFSKG+ K
Sbjct: 239 IWDTANGQCIKTLVDDENPPVAFVKFSPNGKY-ILASNLDSTLKLWDFSKGKTLK 292
Score = 75 (31.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVA--FSMFGERGKYLISGGNDKLVKVWDCS 323
D+ +++ D S GK L Y+ GH + C+ FS+ G GK++ISG D + +W+
Sbjct: 277 DSTLKLWDFSKGKTLK-QYT--GHENSKYCIFANFSVTG--GKWIISGSEDCKIYIWNLQ 331
Query: 324 RFQGVQ 329
+ VQ
Sbjct: 332 TREIVQ 337
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 103 (41.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 42/175 (24%), Positives = 75/175 (42%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKS 68
R L GHK S D V S+ +D + F++ + + N V F
Sbjct: 123 RTLTGHKLGVNDIAWSSDSR-CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNP 181
Query: 69 GNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVK 128
+ ++ S + V+ +DV + L +++ + ++ + N S +A G V+
Sbjct: 182 QSSLVVSGSFDESVRIWDVKTGMCIKTLPAHS---DPVSAVSFNRDGSLIASGSYDGLVR 238
Query: 129 IIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNK 183
I D K+L + + V+F P + +++ LDS L +WDFSKG+ K
Sbjct: 239 IWDTANGQCIKTLVDDENPPVAFVKFSPNGKY-ILASNLDSTLKLWDFSKGKTLK 292
Score = 75 (31.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVA--FSMFGERGKYLISGGNDKLVKVWDCS 323
D+ +++ D S GK L Y+ GH + C+ FS+ G GK++ISG D + +W+
Sbjct: 277 DSTLKLWDFSKGKTLK-QYT--GHENSKYCIFANFSVTG--GKWIISGSEDCKIYIWNLQ 331
Query: 324 RFQGVQ 329
+ VQ
Sbjct: 332 TREIVQ 337
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 108 (43.1 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 36/181 (19%), Positives = 76/181 (41%)
Query: 1 MTDAEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGP 60
+T K + + H + + + + +A+ G+D + + + + + P
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 61 VTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLAC 120
V S+ + E I+ S ++ +D+ R L + N I + +P F+A
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKAN---ICSLDFHPYGEFVAS 122
Query: 121 ADDGGDVKIIDIRQH-CLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
++K+ DIR+ C+++ GHS ++F P W + S D + +WD + G
Sbjct: 123 GSQDTNIKLWDIRRKGCVFRY--RGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAG 179
Query: 180 R 180
+
Sbjct: 180 K 180
Score = 72 (30.4 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLI-SGGNDKLVKVWDCSR 324
D +++ D + GK + GHT + V F +YL+ SG +D+ ++ WD +
Sbjct: 168 DHTVKLWDLTAGKMMS---EFPGHTGPVNVVEF----HPNEYLLASGSSDRTIRFWDLEK 220
Query: 325 FQGV 328
FQ V
Sbjct: 221 FQVV 224
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 107 (42.7 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 56/216 (25%), Positives = 87/216 (40%)
Query: 14 HKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDI 73
H C S D + +S +DGC+ + +S + GPV S CF I
Sbjct: 25 HHGEVNCSAFSPDGRTLLTAS-DDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLI 83
Query: 74 IYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIR 133
SS ++ +DV L+ + + E ++ +P S LA G D + I
Sbjct: 84 ASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVS---FSPDSKQLASG--GWDKRAIVWE 138
Query: 134 -QHCLYKSLRAGHSSICSSVQFIPWKPWE--VISGGLDSKLVMWDFSKGRPNKIVNF-GL 189
Q L GH C S+Q + P + +G DS + +WD P +V++ L
Sbjct: 139 VQSGRRVHLLVGH---CDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTP--VVSYHNL 193
Query: 190 PENNGNAG-QCYNPAFVHAIAIPDADMLDKTNKICV 224
+ GN CY+ + + A + DKT ICV
Sbjct: 194 EGHTGNISCLCYSASGLLA-----SGSWDKT--ICV 222
Score = 64 (27.6 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 281 HLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDC 322
+L + GHT + +AFS + K L S G + VKVWDC
Sbjct: 229 NLPLQLKGHTIWVNSLAFSP--DELK-LASAGYSRTVKVWDC 267
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 108 (43.1 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 36/181 (19%), Positives = 76/181 (41%)
Query: 1 MTDAEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGP 60
+T K + + H + + + + +A+ G+D + + + + + P
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 61 VTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLAC 120
V S+ + E I+ S ++ +D+ R L + N I + +P F+A
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKAN---ICSLDFHPYGEFVAS 122
Query: 121 ADDGGDVKIIDIRQH-CLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
++K+ DIR+ C+++ GHS ++F P W + S D + +WD + G
Sbjct: 123 GSQDTNIKLWDIRRKGCVFRY--RGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAG 179
Query: 180 R 180
+
Sbjct: 180 K 180
Score = 72 (30.4 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLI-SGGNDKLVKVWDCSR 324
D +++ D + GK + GHT + V F +YL+ SG +D+ ++ WD +
Sbjct: 168 DHTVKLWDLTAGKMMS---EFPGHTGPVNVVEF----HPNEYLLASGSSDRTIRFWDLEK 220
Query: 325 FQGV 328
FQ V
Sbjct: 221 FQVV 224
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 108 (43.1 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 36/181 (19%), Positives = 76/181 (41%)
Query: 1 MTDAEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGP 60
+T K + + H + + + + +A+ G+D + + + + + P
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 61 VTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLAC 120
V S+ + E I+ S ++ +D+ R L + N I + +P F+A
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKAN---ICSLDFHPYGEFVAS 122
Query: 121 ADDGGDVKIIDIRQH-CLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
++K+ DIR+ C+++ GHS ++F P W + S D + +WD + G
Sbjct: 123 GSQDTNIKLWDIRRKGCVFRY--RGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAG 179
Query: 180 R 180
+
Sbjct: 180 K 180
Score = 72 (30.4 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLI-SGGNDKLVKVWDCSR 324
D +++ D + GK + GHT + V F +YL+ SG +D+ ++ WD +
Sbjct: 168 DHTVKLWDLTAGKMMS---EFPGHTGPVNVVEF----HPNEYLLASGSSDRTIRFWDLEK 220
Query: 325 FQGV 328
FQ V
Sbjct: 221 FQVV 224
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 108 (43.1 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 36/181 (19%), Positives = 76/181 (41%)
Query: 1 MTDAEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGP 60
+T K + + H + + + + +A+ G+D + + + + + P
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 61 VTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLAC 120
V S+ + E I+ S ++ +D+ R L + N I + +P F+A
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKAN---ICSLDFHPYGEFVAS 122
Query: 121 ADDGGDVKIIDIRQH-CLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
++K+ DIR+ C+++ GHS ++F P W + S D + +WD + G
Sbjct: 123 GSQDTNIKLWDIRRKGCVFRY--RGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAG 179
Query: 180 R 180
+
Sbjct: 180 K 180
Score = 72 (30.4 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLI-SGGNDKLVKVWDCSR 324
D +++ D + GK + GHT + V F +YL+ SG +D+ ++ WD +
Sbjct: 168 DHTVKLWDLTAGKMMS---EFPGHTGPVNVVEF----HPNEYLLASGSSDRTIRFWDLEK 220
Query: 325 FQGV 328
FQ V
Sbjct: 221 FQVV 224
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 108 (43.1 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 36/181 (19%), Positives = 76/181 (41%)
Query: 1 MTDAEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGP 60
+T K + + H + + + + +A+ G+D + + + + + P
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 61 VTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLAC 120
V S+ + E I+ S ++ +D+ R L + N I + +P F+A
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKAN---ICSLDFHPYGEFVAS 122
Query: 121 ADDGGDVKIIDIRQH-CLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
++K+ DIR+ C+++ GHS ++F P W + S D + +WD + G
Sbjct: 123 GSQDTNIKLWDIRRKGCVFRY--RGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAG 179
Query: 180 R 180
+
Sbjct: 180 K 180
Score = 72 (30.4 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLI-SGGNDKLVKVWDCSR 324
D +++ D + GK + GHT + V F +YL+ SG +D+ ++ WD +
Sbjct: 168 DHTVKLWDLTAGKMMS---EFPGHTGPVNVVEF----HPNEYLLASGSSDRTIRFWDLEK 220
Query: 325 FQGV 328
FQ V
Sbjct: 221 FQVV 224
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 108 (43.1 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 36/181 (19%), Positives = 76/181 (41%)
Query: 1 MTDAEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGP 60
+T K + + H + + + + +A+ G+D + + + + + P
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 61 VTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLAC 120
V S+ + E I+ S ++ +D+ R L + N I + +P F+A
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKAN---ICSLDFHPYGEFVAS 122
Query: 121 ADDGGDVKIIDIRQH-CLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
++K+ DIR+ C+++ GHS ++F P W + S D + +WD + G
Sbjct: 123 GSQDTNIKLWDIRRKGCVFRY--RGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAG 179
Query: 180 R 180
+
Sbjct: 180 K 180
Score = 72 (30.4 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLI-SGGNDKLVKVWDCSR 324
D +++ D + GK + GHT + V F +YL+ SG +D+ ++ WD +
Sbjct: 168 DHTVKLWDLTAGKMMS---EFPGHTGPVNVVEF----HPNEYLLASGSSDRTIRFWDLEK 220
Query: 325 FQGV 328
FQ V
Sbjct: 221 FQVV 224
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 88 (36.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 29/119 (24%), Positives = 53/119 (44%)
Query: 65 CFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDG 124
C K N+ + S+ + K+ + ++ + Y + I+ + + S + A D
Sbjct: 48 CVKFSNDGNLLASASVD-KTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDD 106
Query: 125 GDVKIIDIRQ--HCLYKSLRAGHSSICSSVQFIPWKPWE-VISGGLDSKLVMWDFSKGR 180
++I D R CL K LR GH++ V F P P ++SG D + +W+ G+
Sbjct: 107 CTLRIWDARSPYECL-KVLR-GHTNFVFCVNFNP--PSNLIVSGSFDETIRIWEVKTGK 161
Score = 85 (35.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
D+ +++ + + GK L + Y+ GHT C+ + GKY++SG D V +WD
Sbjct: 234 DSTLKLSNYATGKFLKV-YT--GHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWD 286
Score = 75 (31.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 35/174 (20%), Positives = 65/174 (37%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKS 68
+ L GH A +C S D ++S + I W + +G ++ L + S
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSG-ISDLAWSS 95
Query: 69 GNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVC---NPKSSFLACADDGG 125
+ S ++ +D P E + N + C NP S+ +
Sbjct: 96 DSHYTCSASDDCTLRIWDARSP-----YECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDE 150
Query: 126 DVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
++I +++ + ++A HS SSV F ++S D +WD +G
Sbjct: 151 TIRIWEVKTGKCVRMIKA-HSMPISSVHFNRDGSL-IVSASHDGSCKIWDAKEG 202
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 112 (44.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 44/174 (25%), Positives = 74/174 (42%)
Query: 6 AKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLC 65
A+ + L H + S D V+ S +D W D + ++ D +G V SL
Sbjct: 741 AEQQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIW-DPATGELLQTLDGHSGTVESLA 799
Query: 66 FKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGG 125
F + ++SG + D+ A+ L+++ + I + P LA A D
Sbjct: 800 FSPDGK---LLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDS 856
Query: 126 DVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
+KI D+ L ++L + HS SV F P + S LDS + +W+ + G
Sbjct: 857 TIKIWDLATGELQQTLDS-HSQSVRSVAFSPDGKL-LASSSLDSTIKVWNPATG 908
Score = 74 (31.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 255 GSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGND 314
G Q S + D +++ + + G+ L + GH VAFS GK+L+SG +D
Sbjct: 972 GKQLASSSS--DTTIKLWNSTTGE---LQQTFKGHDLWIRAVAFS---PDGKHLVSGSDD 1023
Query: 315 KLVKVWD 321
+K+WD
Sbjct: 1024 NTIKLWD 1030
Score = 72 (30.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 33/127 (25%), Positives = 53/127 (41%)
Query: 205 VHAIAI-PDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVN 263
VHA+A PD L ++ + D + E + +S T G S N
Sbjct: 1047 VHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLAS--N 1104
Query: 264 IRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCS 323
D +++ + G+ L ++ G + VAFS GK L SG D +K+WD +
Sbjct: 1105 SYDGTIKLWNPLTGE---LQQTLTGRSDWVDSVAFS---PDGKQLASGYYDSTIKLWDSA 1158
Query: 324 RFQGVQT 330
+ +QT
Sbjct: 1159 TGELLQT 1165
Score = 67 (28.6 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
D+ +++ D + G+ L ++ GH+ V FS GK L SG D+ K+WD
Sbjct: 1149 DSTIKLWDSATGELLQ---TLEGHSDRIQSVVFS---PDGKLLASGSYDQTAKLWD 1198
Score = 60 (26.2 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 288 GHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 330
GH+ + VAFS GK L S +D +K+W+ + + QT
Sbjct: 958 GHSQSVRSVAFS---PDGKQLASSSSDTTIKLWNSTTGELQQT 997
Score = 55 (24.4 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
D ++ D + G+ L + GH+ VAFS GK L S + +K+WD
Sbjct: 1191 DQTAKLWDPATGELLQI---FEGHSKWVESVAFS---PDGKLLASSSYGETIKLWD 1240
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 101 (40.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 45/180 (25%), Positives = 79/180 (43%)
Query: 3 DAEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVT 62
D K + L GH + S D V++S + W D+RS L T G+
Sbjct: 70 DGNCK-KTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVW-DMRSGKC-LKTLKGHSDFV 126
Query: 63 SLC-FKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACA 121
C F + I+ S + VK ++V + + L++ + + + I+ + N S +
Sbjct: 127 FCCDFNPPSNLIVSGSFDESVKIWEVK---TGKCLKTLSAHSDPISAVNFNCNGSLIVSG 183
Query: 122 DDGGDVKIIDIRQ-HCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
G +I D CL G+ + S V+F P + +++ LD+ L +WD+S+GR
Sbjct: 184 SYDGLCRIWDAASGQCLRTLADEGNPPV-SFVKFSPNGKY-ILTATLDNTLKLWDYSRGR 241
Score = 70 (29.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERG-KYLISGGNDKLVKVWDCSR 324
D +++ D S G+ L Y+ GH C+ F+ F G K+++SG D +V +W+
Sbjct: 229 DNTLKLWDYSRGRCLKT-YT--GHKNEKYCL-FASFSVTGRKWVVSGSEDNMVYIWNLQT 284
Query: 325 FQGVQ 329
+ VQ
Sbjct: 285 KEIVQ 289
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 90 (36.7 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 42/174 (24%), Positives = 77/174 (44%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLC-FK 67
+ + GHK + S D V++S + W D+ S L T G+ C F
Sbjct: 55 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW-DVSSGKC-LKTLKGHSNYVFCCNFN 112
Query: 68 SGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDV 127
+ I+ S + V+ +DV + L +++ + ++ + N S + + G
Sbjct: 113 PQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS---DPVSAVHFNRDGSLIVSSSYDGLC 169
Query: 128 KIIDIRQ-HCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
+I D CL K+L + S V+F P + +++ LD+ L +WD+SKG+
Sbjct: 170 RIWDTASGQCL-KTLIDDDNPPVSFVKFSPNGKY-ILAATLDNTLKLWDYSKGK 221
Score = 78 (32.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVA--FSMFGERGKYLISGGNDKLVKVWDCS 323
D +++ D S GK L Y+ GH C+ FS+ G GK+++SG D LV +W+
Sbjct: 209 DNTLKLWDYSKGKCLKT-YT--GHKNEKYCIFANFSVTG--GKWIVSGSEDNLVYIWNLQ 263
Query: 324 RFQGVQ 329
+ VQ
Sbjct: 264 TKEIVQ 269
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 125 (49.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 35/168 (20%), Positives = 79/168 (47%)
Query: 14 HKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGN-GPVTSLCFKSGNED 72
H C + + + G+D + + + K ++ G+ PV S+ F S
Sbjct: 14 HSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSI-GKTTSPMSLCGHTSPVDSVAFNSEEVL 72
Query: 73 IIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDI 132
++ +S +K +D+ + + ++ ++ + + +P FLA ++++ D
Sbjct: 73 VLAGASSGVIKLWDLEES---KMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDT 129
Query: 133 RQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
R+ ++ + GH+ S+++F P W V+SGGLD+ + +WD + G+
Sbjct: 130 RKKGCIQTYK-GHTRGISTIEFSPDGRW-VVSGGLDNVVKVWDLTAGK 175
Score = 53 (23.7 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 17/67 (25%), Positives = 33/67 (49%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGN-DKLVKVWDCSR 324
D +++ D + GK LH ++ H + F ++L++ G+ D+ VK WD
Sbjct: 163 DNVVKVWDLTAGKLLH-EFKC--HEGPIRSLDFHPL----EFLLATGSADRTVKFWDLET 215
Query: 325 FQGVQTS 331
F+ + T+
Sbjct: 216 FELIGTT 222
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 90 (36.7 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 42/174 (24%), Positives = 77/174 (44%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLC-FK 67
+ + GHK + S D V++S + W D+ S L T G+ C F
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW-DVSSGKC-LKTLKGHSNYVFCCNFN 138
Query: 68 SGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDV 127
+ I+ S + V+ +DV + L +++ + ++ + N S + + G
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS---DPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 128 KIIDIRQ-HCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
+I D CL K+L + S V+F P + +++ LD+ L +WD+SKG+
Sbjct: 196 RIWDTASGQCL-KTLIDDDNPPVSFVKFSPNGKY-ILAATLDNTLKLWDYSKGK 247
Score = 78 (32.5 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVA--FSMFGERGKYLISGGNDKLVKVWDCS 323
D +++ D S GK L Y+ GH C+ FS+ G GK+++SG D LV +W+
Sbjct: 235 DNTLKLWDYSKGKCLKT-YT--GHKNEKYCIFANFSVTG--GKWIVSGSEDNLVYIWNLQ 289
Query: 324 RFQGVQ 329
+ VQ
Sbjct: 290 TKEIVQ 295
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 90 (36.7 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 42/174 (24%), Positives = 77/174 (44%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLC-FK 67
+ + GHK + S D V++S + W D+ S L T G+ C F
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW-DVSSGKC-LKTLKGHSNYVFCCNFN 138
Query: 68 SGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDV 127
+ I+ S + V+ +DV + L +++ + ++ + N S + + G
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS---DPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 128 KIIDIRQ-HCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
+I D CL K+L + S V+F P + +++ LD+ L +WD+SKG+
Sbjct: 196 RIWDTASGQCL-KTLIDDDNPPVSFVKFSPNGKY-ILAATLDNTLKLWDYSKGK 247
Score = 78 (32.5 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVA--FSMFGERGKYLISGGNDKLVKVWDCS 323
D +++ D S GK L Y+ GH C+ FS+ G GK+++SG D LV +W+
Sbjct: 235 DNTLKLWDYSKGKCLKT-YT--GHKNEKYCIFANFSVTG--GKWIVSGSEDNLVYIWNLQ 289
Query: 324 RFQGVQ 329
+ VQ
Sbjct: 290 TKEIVQ 295
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 90 (36.7 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 42/174 (24%), Positives = 77/174 (44%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLC-FK 67
+ + GHK + S D V++S + W D+ S L T G+ C F
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW-DVSSGKC-LKTLKGHSNYVFCCNFN 138
Query: 68 SGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDV 127
+ I+ S + V+ +DV + L +++ + ++ + N S + + G
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS---DPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 128 KIIDIRQ-HCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
+I D CL K+L + S V+F P + +++ LD+ L +WD+SKG+
Sbjct: 196 RIWDTASGQCL-KTLIDDDNPPVSFVKFSPNGKY-ILAATLDNTLKLWDYSKGK 247
Score = 78 (32.5 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVA--FSMFGERGKYLISGGNDKLVKVWDCS 323
D +++ D S GK L Y+ GH C+ FS+ G GK+++SG D LV +W+
Sbjct: 235 DNTLKLWDYSKGKCLKT-YT--GHKNEKYCIFANFSVTG--GKWIVSGSEDNLVYIWNLQ 289
Query: 324 RFQGVQ 329
+ VQ
Sbjct: 290 TKEIVQ 295
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 90 (36.7 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 42/174 (24%), Positives = 77/174 (44%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLC-FK 67
+ + GHK + S D V++S + W D+ S L T G+ C F
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW-DVSSGKC-LKTLKGHSNYVFCCNFN 138
Query: 68 SGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDV 127
+ I+ S + V+ +DV + L +++ + ++ + N S + + G
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS---DPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 128 KIIDIRQ-HCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
+I D CL K+L + S V+F P + +++ LD+ L +WD+SKG+
Sbjct: 196 RIWDTASGQCL-KTLIDDDNPPVSFVKFSPNGKY-ILAATLDNTLKLWDYSKGK 247
Score = 78 (32.5 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVA--FSMFGERGKYLISGGNDKLVKVWDCS 323
D +++ D S GK L Y+ GH C+ FS+ G GK+++SG D LV +W+
Sbjct: 235 DNTLKLWDYSKGKCLKT-YT--GHKNEKYCIFANFSVTG--GKWIVSGSEDNLVYIWNLQ 289
Query: 324 RFQGVQ 329
+ VQ
Sbjct: 290 TKEIVQ 295
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 90 (36.7 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 42/174 (24%), Positives = 77/174 (44%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLC-FK 67
+ + GHK + S D V++S + W D+ S L T G+ C F
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW-DVSSGKC-LKTLKGHSNYVFCCNFN 138
Query: 68 SGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDV 127
+ I+ S + V+ +DV + L +++ + ++ + N S + + G
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS---DPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 128 KIIDIRQ-HCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
+I D CL K+L + S V+F P + +++ LD+ L +WD+SKG+
Sbjct: 196 RIWDTASGQCL-KTLIDDDNPPVSFVKFSPNGKY-ILAATLDNTLKLWDYSKGK 247
Score = 78 (32.5 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVA--FSMFGERGKYLISGGNDKLVKVWDCS 323
D +++ D S GK L Y+ GH C+ FS+ G GK+++SG D LV +W+
Sbjct: 235 DNTLKLWDYSKGKCLKT-YT--GHKNEKYCIFANFSVTG--GKWIVSGSEDNLVYIWNLQ 289
Query: 324 RFQGVQ 329
+ VQ
Sbjct: 290 TKEIVQ 295
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 109 (43.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 39/182 (21%), Positives = 77/182 (42%)
Query: 1 MTDAEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCI-CWFDLRSKDVQLVTDVGNG 59
+T K + + H + + + + +A+ G+D + W + V +T
Sbjct: 6 VTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTG-HTT 64
Query: 60 PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLA 119
P+ SL + E I+ S ++ +D+ R L + N I + +P SF+A
Sbjct: 65 PIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKAN---ICSLDFHPYGSFVA 121
Query: 120 CADDGGDVKIIDIRQH-CLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
D+K+ D+R+ C++K H+ ++F P W + S D + +WD +
Sbjct: 122 SGSLDTDIKLWDVRRKGCIFKY--KSHTQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA 178
Query: 179 GR 180
G+
Sbjct: 179 GK 180
Score = 65 (27.9 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLI-SGGNDKLVKVWDCSR 324
D +++ D + GK + + GH+ + V F +YL+ SG +D+ ++ WD +
Sbjct: 168 DHTVKLWDLTAGKVM---FEFTGHSGPVNVVEF----HPSEYLLASGSSDRTIRFWDLEK 220
Query: 325 FQGV 328
F V
Sbjct: 221 FHVV 224
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 116 (45.9 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 48/197 (24%), Positives = 87/197 (44%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGP-VTSLCFK 67
RRL GH + S D F S DG + +DL + V VG+ V S+ F
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQ-FALSGSWDGELRLWDLAA-GVSTRRFVGHTKDVLSVAFS 114
Query: 68 SGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKS--SFLACADDGG 125
N I+ S + +K ++ + E +++ ++ + +P + + A
Sbjct: 115 LDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK 174
Query: 126 DVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIV 185
VK+ ++ +C +S AGH+ S+V P SGG D +++WD ++G+ K+
Sbjct: 175 TVKVWNL-SNCKLRSTLAGHTGYVSTVAVSPDGSL-CASGGKDGVVLLWDLAEGK--KL- 229
Query: 186 NFGLPENNGNAGQCYNP 202
+ L N+ C++P
Sbjct: 230 -YSLEANSVIHALCFSP 245
Score = 47 (21.6 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 295 CVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325
C + + + G L SG D +++VW R+
Sbjct: 298 CTSLNWSAD-GSTLFSGYTDGVIRVWGIGRY 327
>DICTYBASE|DDB_G0287817 [details] [associations]
symbol:wdr24 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005053 "peroxisome matrix targeting
signal-2 binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0287817 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 GO:GO:0016558 GO:GO:0005053 PANTHER:PTHR22850:SF4
RefSeq:XP_637077.1 ProteinModelPortal:Q54JS5
EnsemblProtists:DDB0304352 GeneID:8626332 KEGG:ddi:DDB_G0287817
OMA:NEPCKGL Uniprot:Q54JS5
Length = 1023
Score = 121 (47.7 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 37/155 (23%), Positives = 73/155 (47%)
Query: 31 VASSGEDGCIC-WFDLR--SKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSS-GKEVKSFD 86
+A++ +G + W +R SK V+ V + V L + D I S ++ +D
Sbjct: 86 IATAATNGAVVIWNTVREGSKSVERVFTDHSRAVNKLAWHPEKLDCILTGSQDNTLRMWD 145
Query: 87 VHMPASWRPLESYNYNKEEINQIVCNP-KSSFLACADDGGDVKIIDIRQHCLYKSLRAGH 145
+ A+ + +++ E I + NP +++ A A D G +++ DIR+ + H
Sbjct: 146 IRDSANASKI-TFSPKSESIRDVQFNPSQANQFAAAFDNGTIQLWDIRKPTIAVEKITSH 204
Query: 146 SSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
+ ++ + P + + SGG D + +WDFS G+
Sbjct: 205 QGLVLTIDWHPEEKNIIASGGRDRAIRVWDFSNGK 239
Score = 55 (24.4 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 10/46 (21%), Positives = 25/46 (54%)
Query: 220 NKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIR 265
++ C + + V ++++ + +++ R KST + + S VNI+
Sbjct: 635 DQFCNILSAEAVTPLVSLPTSISLERQKSTDN-ISDNNSNVHVNIK 679
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 90 (36.7 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 42/174 (24%), Positives = 76/174 (43%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLC-FK 67
+ + GHK + S D V+ S + W +L S L T G+ C F
Sbjct: 108 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVW-EL-STGKSLKTLKGHSNYVFCCNFN 165
Query: 68 SGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDV 127
+ I+ S + V+ +DV + L +++ + ++ + N S + + G
Sbjct: 166 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS---DPVSAVHFNRDGSLIVSSSYDGLC 222
Query: 128 KIIDIRQ-HCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
+I D CL K+L + S V+F P + +++ LD+ L +WD+SKG+
Sbjct: 223 RIWDTASGQCL-KTLIDDDNPPVSFVKFSPNGKY-ILAATLDNTLKLWDYSKGK 274
Score = 77 (32.2 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVA--FSMFGERGKYLISGGNDKLVKVWDCS 323
D +++ D S GK L Y+ GH C+ FS+ G GK+++SG D +V +W+
Sbjct: 262 DNTLKLWDYSKGKCLKT-YT--GHKNEKYCIFANFSVTG--GKWIVSGSEDNMVYIWNLQ 316
Query: 324 RFQGVQ 329
+ VQ
Sbjct: 317 SKEVVQ 322
>ZFIN|ZDB-GENE-041111-211 [details] [associations]
symbol:wdfy2 "WD repeat and FYVE domain containing
2" species:7955 "Danio rerio" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR000306 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF01363 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00064 SMART:SM00320
ZFIN:ZDB-GENE-041111-211 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 GeneTree:ENSGT00670000098022 EMBL:CR533429
HOVERGEN:HBG054128 OMA:FVLEMEW CTD:115825 EMBL:AY394954
IPI:IPI00483648 RefSeq:NP_991308.1 UniGene:Dr.86865 STRING:Q6TLF1
Ensembl:ENSDART00000059209 GeneID:492636 KEGG:dre:492636
InParanoid:Q6TLF1 NextBio:20865169 Uniprot:Q6TLF1
Length = 400
Score = 108 (43.1 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 48/198 (24%), Positives = 83/198 (41%)
Query: 14 HKATATC-CIASRDRPGFVASSGEDGCICWFDLRSKDVQLVT-----DVGNGPVTSLCFK 67
H C C++ ++ E+G + F L S+D +T G VT + F
Sbjct: 65 HTMPVACSCMSFNPETRRISVGLENGTVSEFVL-SEDYNQMTPARTYQAHQGGVTVVLFV 123
Query: 68 SGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDV 127
E ++ S+G++ KSF H S + L +Y ++ + + ++ D G V
Sbjct: 124 LEMEWVL--STGQD-KSFTWHCSESGQQLGTYR-TTAWVSGLQFDVETRHAFVGDHSGQV 179
Query: 128 KIIDIRQ-HCLYKSLRAGHSSICSSVQFIPWKPWE--VISGGLDSKLVMWDFSKGRPNKI 184
I+ + Q +C + GH+ +V + W P + + SG D ++MWD GR
Sbjct: 180 TILKLEQDNCSLVTTFKGHTG---NVTALCWDPVQRVLFSGSSDHSIIMWDIG-GRKGTA 235
Query: 185 VNFGLPENNGNAGQCYNP 202
+ N+ G CY P
Sbjct: 236 IELQ-GHNDKVQGLCYAP 252
Score = 58 (25.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 289 HTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
H + S V RG +L++ G DK++K+WD
Sbjct: 363 HDSKHSIVHMQYEPTRG-WLLTSGTDKVIKLWD 394
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 73 (30.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 24/94 (25%), Positives = 43/94 (45%)
Query: 95 PLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDI-RQHCLYKSLRAGHSSICSSVQ 153
P++++ + E+N I P+ LA D +KI + R C + L+A HS +++
Sbjct: 526 PIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCH-DLQA-HSKEIYTIK 583
Query: 154 FIPWKPWE--------VISGGLDSKLVMWDFSKG 179
+ P P + S DS + +WD +G
Sbjct: 584 WSPTGPGTNNPNTNLILASASFDSTVRLWDVERG 617
Score = 71 (30.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 26/96 (27%), Positives = 39/96 (40%)
Query: 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSL 64
E+K R LRGH++ C + R + SG+ W D+ + N V
Sbjct: 345 ESKARVLRGHESEVFICAWNPSRDLLASGSGDSTARIW-DMSDANTN-----SNQLVLRH 398
Query: 65 CFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYN 100
C + G + V S K+V S D + S SY+
Sbjct: 399 CIQKGGAE---VPSNKDVTSLDWNCDGSLLATGSYD 431
Score = 68 (29.0 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325
D+ + + D G +H ++ HT VAFS GK+L SG DK V +W
Sbjct: 606 DSTVRLWDVERGSCIH---TLTKHTEPVYSVAFS---PDGKHLASGSFDKCVHIWSTQTG 659
Query: 326 QGVQT 330
Q V +
Sbjct: 660 QLVHS 664
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 97 (39.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 55/233 (23%), Positives = 94/233 (40%)
Query: 11 LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVT-SLCFKSG 69
L+ H T ++ F+ S + C W D S + +L T G+ V ++ F +
Sbjct: 88 LKAHILPLTNVALNKSGSCFITGSYDRTCKLW-DTASGE-ELNTLEGHRNVVYAIAFNNP 145
Query: 70 NEDIIYVSS-GKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVK 128
D I S K K + V + + EI + NP+S+ +A K
Sbjct: 146 YGDKIATGSFDKTCKLWSVETGKCYHTFRGHT---AEIVCLSFNPQSTLVATGSMDTTAK 202
Query: 129 IIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFG 188
+ DI+ +LR GHS+ S+ F +I+G D +V+WD GR VN
Sbjct: 203 LWDIQNGEEVYTLR-GHSAEIISLSFNTSGD-RIITGSFDHTVVVWDADTGRK---VNIL 257
Query: 189 LPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESEL 241
+ G+ + + +F ++ +DKT K+ G V + + E+
Sbjct: 258 I----GHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEI 306
Score = 68 (29.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 288 GHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQ 329
GH S ++F+ +G +L++G +DK ++WD Q +Q
Sbjct: 343 GHEGEISKISFN---PQGNHLLTGSSDKTARIWDAQTGQCLQ 381
>RGD|1307480 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0031965 "nuclear membrane"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307480 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH474015 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD
CTD:10885 OrthoDB:EOG412M4S IPI:IPI00201140 RefSeq:NP_001101175.1
UniGene:Rn.12973 Ensembl:ENSRNOT00000026726 GeneID:310720
KEGG:rno:310720 NextBio:662507 Uniprot:D4A106
Length = 942
Score = 95 (38.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 44/169 (26%), Positives = 74/169 (43%)
Query: 11 LRGHKATATCCIASRDRPGFVASSG-EDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSG 69
L+G K TC S D G + G EDG I F L S + + + VTSL +
Sbjct: 61 LQGLKQEVTCLCPSPD--GLHLAVGYEDGAIRVFSLLSGEGNITFNGHRAAVTSLKYDQL 118
Query: 70 NEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKI 129
+ S +V +DV + L+ + K+ + Q + + + L + VK
Sbjct: 119 GGRLASGSKDTDVIIWDVINESGLYRLKGH---KDAVTQALFLRERNLLVTSGKDTMVKW 175
Query: 130 IDI-RQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFS 177
D+ QHC +K++ GH + + + + +I+G DS+L WD +
Sbjct: 176 WDLDNQHC-FKTM-VGHRTEVWGLVLVS-EETRLITGAADSELRAWDIA 221
Score = 66 (28.3 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 262 VNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
+ + M++ D + G L ++ H A ++ S +RG ++GG DK VK WD
Sbjct: 470 IGTKTGNMQLYDLASGNLLE---TIAAHDGALWSMSLSP-DQRG--FVTGGADKAVKFWD 523
Score = 60 (26.2 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 281 HLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSR 324
H+ ++ GH C+A S G+ Y++S +DK +++W+ +R
Sbjct: 666 HIQ-TLEGHHQEIWCLAVSPSGD---YVVSASHDKSLRLWERTR 705
Score = 53 (23.7 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 216 LDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAE 268
+DKT +I D V++V I S+ + K K LK ++ +++N + E
Sbjct: 287 VDKTGRILACHGTDSVLEVFCILSKAEVQ--KKMDKKLKKARKKARLNSANEE 337
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 90 (36.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 42/174 (24%), Positives = 77/174 (44%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLC-FK 67
+ + GHK + S D V++S + W D+ S L T G+ C F
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW-DVSSGKC-LKTLKGHSNYVFCCNFN 138
Query: 68 SGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDV 127
+ I+ S + V+ +DV + L +++ + ++ + N S + + G
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS---DPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 128 KIIDIRQ-HCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
+I D CL K+L + S V+F P + +++ LD+ L +WD+SKG+
Sbjct: 196 RIWDTASGQCL-KTLIDDDNPPVSFVKFSPNGKY-ILAATLDNTLKLWDYSKGK 247
Score = 72 (30.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVA--FSMFGERGKYLISGGNDKLVKVWDCS 323
D +++ D S GK L Y+ H C+ FS+ G GK+++SG D LV +W+
Sbjct: 235 DNTLKLWDYSKGKCLKT-YTC--HKNEKYCIFANFSVTG--GKWIVSGSEDNLVYIWNLQ 289
Query: 324 RFQGVQ 329
+ VQ
Sbjct: 290 TKEVVQ 295
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 95 (38.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 281 HLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 330
H +++ GH + V + GE+ YLISG +DKLVK+WD VQT
Sbjct: 177 HPHFTLEGHEKGINSVEYFSGGEK-PYLISGADDKLVKIWDYQSKTCVQT 225
Score = 78 (32.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 26/154 (16%), Positives = 69/154 (44%)
Query: 30 FVASSGEDGCICWFDLRSKDVQLVTDVG-NGPVTSLCFKSGNEDIIYVSSGKEVKSFDVH 88
++ +S DG + ++ ++++ +V N PV + F + + I+ S ++ ++ +
Sbjct: 29 WILASLYDGNVYIWNYETQNMVKSFEVSPNNPVRTARFIAKKQWIVTGSDDTYIRVYNYN 88
Query: 89 MPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSI 148
+ ++S+ + + I I+ +P ++ + D +K+ D + + GHS
Sbjct: 89 ---TMEKIKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDYEKGWSNTQVFEGHSHY 145
Query: 149 CSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPN 182
S+ + P + + LD + +W + P+
Sbjct: 146 VMSIAWNPKDTNQFATASLDKTVKVWSINSPHPH 179
>MGI|MGI:2443143 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524
KO:K14556 OMA:SIFAHDD HSSP:Q02793 CTD:10885 HOVERGEN:HBG013192
OrthoDB:EOG412M4S EMBL:AK050738 EMBL:AK050797 EMBL:BC063100
IPI:IPI00221822 RefSeq:NP_780761.1 UniGene:Mm.24591
ProteinModelPortal:Q8BHB4 SMR:Q8BHB4 STRING:Q8BHB4
PhosphoSite:Q8BHB4 PaxDb:Q8BHB4 PRIDE:Q8BHB4
Ensembl:ENSMUST00000052120 GeneID:269470 KEGG:mmu:269470
UCSC:uc008qqo.2 InParanoid:Q8BHB4 NextBio:392854 Bgee:Q8BHB4
Genevestigator:Q8BHB4 Uniprot:Q8BHB4
Length = 942
Score = 97 (39.2 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 44/167 (26%), Positives = 74/167 (44%)
Query: 11 LRGHKATATCCIASRDRPGFVASSG-EDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSG 69
L+G+K TC S D G + G EDG I F L S + + + VTSL +
Sbjct: 61 LQGNKQEVTCLCPSPD--GLHLAVGYEDGAIRIFSLLSGEGNITFNGHKAAVTSLKYDQL 118
Query: 70 NEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKI 129
+ S +V +DV + L+ + K+ + Q + + + L + VK
Sbjct: 119 GGRLASGSKDTDVIIWDVINESGLYRLKGH---KDAVTQALFLRERNLLVTSGKDTMVKW 175
Query: 130 IDI-RQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWD 175
D+ QHC +K++ GH + + + + +I+G DS+L WD
Sbjct: 176 WDLDNQHC-FKTM-VGHRTEVWGLVLVSEEK-RLITGAADSELRAWD 219
Score = 62 (26.9 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 262 VNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
+ + +++ D + G L ++ H A ++ S +RG ++GG DK VK WD
Sbjct: 470 IGTKTGNLQLYDLASGTLLE---TIAAHDGALWSMSLSP-DQRG--FVTGGADKAVKFWD 523
Score = 60 (26.2 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 281 HLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSR 324
H+ ++ GH C+A S G+ Y++S +DK +++W+ +R
Sbjct: 666 HIQ-TLEGHHQEIWCLAVSPSGD---YVVSASHDKSLRLWERTR 705
Score = 59 (25.8 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 296 VAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 330
V + F + + G D +K WD +F+ +QT
Sbjct: 635 VMYLRFVPKSHLFFTAGKDHKIKQWDADKFEHIQT 669
Score = 53 (23.7 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 216 LDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAE 268
+DKT +I D V++V I S+ + K K LK ++ +++N + E
Sbjct: 287 VDKTGRILACHGTDSVLEVFCILSKAEVQ--KKMDKKLKKARKKARLNSANEE 337
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 112 (44.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 55/221 (24%), Positives = 99/221 (44%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGP-VTSLCFK 67
R LRGH + + S D F S DG + +DL + VG+ V S+ F
Sbjct: 57 RALRGHSHFVSDVVISSDGQ-FALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFS 114
Query: 68 SGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDV 127
S N I+ S K +K ++ + ++ +++ E ++ + +P SS G D
Sbjct: 115 SDNRQIVSGSRDKTIKLWNTLGVCKYT-VQDESHS-EWVSCVRFSPNSSNPIIVSCGWD- 171
Query: 128 KIIDIRQ--HCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIV 185
K++++ +C K+ GH+ ++V P SGG D + ++WD ++G+ +
Sbjct: 172 KLVNVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL-CASGGKDGQAMLWDLNEGKHLYTL 230
Query: 186 NFGLPENNGNAGQCYNPA--FVHAIAIPDADMLDKTNKICV 224
+ G + NA C++P ++ A P + D KI V
Sbjct: 231 DGG---DIINA-LCFSPNRYWLCAATGPSIKIWDLEGKIIV 267
Score = 45 (20.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 295 CVAFSMFGERGKYLISGGNDKLVKVW 320
C + + + G+ L +G D LV+VW
Sbjct: 286 CTSLAWSAD-GQTLFAGYTDNLVRVW 310
>WB|WBGene00006773 [details] [associations]
symbol:unc-37 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035046 "pronuclear migration" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0001505 "regulation
of neurotransmitter levels" evidence=IDA] [GO:0007268 "synaptic
transmission" evidence=IMP] [GO:0050803 "regulation of synapse
structure and activity" evidence=IMP] [GO:0050770 "regulation of
axonogenesis" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR005617
InterPro:IPR009146 InterPro:IPR015943 Pfam:PF00400 Pfam:PF03920
PRINTS:PR01850 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0035046
GO:GO:0003714 GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0050803
GO:GO:0040011 GO:GO:0048477 GO:GO:0006351 GO:GO:0050770
GO:GO:0040035 GO:GO:0001505 EMBL:FO081084
GeneTree:ENSGT00550000074465 HOGENOM:HOG000293211 EMBL:U89245
EMBL:AF001271 EMBL:AF001272 PIR:T15211 RefSeq:NP_491932.1
UniGene:Cel.7359 ProteinModelPortal:O02482 SMR:O02482
DIP:DIP-27333N IntAct:O02482 MINT:MINT-1056160 STRING:O02482
PaxDb:O02482 EnsemblMetazoa:W02D3.9.1 EnsemblMetazoa:W02D3.9.2
GeneID:172394 KEGG:cel:CELE_W02D3.9 UCSC:W02D3.9.2 CTD:172394
WormBase:W02D3.9 InParanoid:O02482 OMA:FDDSLIV NextBio:875325
Uniprot:O02482
Length = 612
Score = 102 (41.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 51/217 (23%), Positives = 87/217 (40%)
Query: 21 CIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSL-CFKSGN-------ED 72
C A+ R +G GC+ +D++ D+ T V P+ SL C K ED
Sbjct: 326 CAATISRDNSRVYTGGKGCVKIWDVKESDISGATVVNRPPIASLDCLKENYIRSCKLFED 385
Query: 73 ---IIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFL-ACADDGGDVK 128
++ V +D+ LE+ + + + +P L AC DG ++
Sbjct: 386 GNTLLIGGEASTVALWDLTTETKTLDLET---DSQACYALAMSPDEKLLFACLADG-NIL 441
Query: 129 IIDIRQHCLYKSLRAGHS--SICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVN 186
I DI +L GH + C + K W SGGLD+ + WD ++ + ++
Sbjct: 442 IYDIHNKVKVGTL-PGHQDGASCLDLSKDGTKLW---SGGLDNSVRCWDLAQRK--EVAK 495
Query: 187 FGLPENNGNAGQCYNPAFVHAIAIPD--ADMLDKTNK 221
+ G C N +V A+ + + ++L T K
Sbjct: 496 HDFASQVFSLGCCPNDEWV-AVGMENNYVEVLSTTGK 531
Score = 64 (27.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 262 VNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 320
V + + +E+L +G ++ L T SCV F GK+ IS G D + W
Sbjct: 516 VGMENNYVEVLSTTGKEKYQL-------TQHESCVLSLKFAHSGKFFISTGKDNALNAW 567
>UNIPROTKB|O02482 [details] [associations]
symbol:unc-37 "Transcription factor unc-37" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR005617 InterPro:IPR009146 InterPro:IPR015943
Pfam:PF00400 Pfam:PF03920 PRINTS:PR01850 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0009792
GO:GO:0002009 GO:GO:0035046 GO:GO:0003714 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0050803 GO:GO:0040011 GO:GO:0048477
GO:GO:0006351 GO:GO:0050770 GO:GO:0040035 GO:GO:0001505
EMBL:FO081084 GeneTree:ENSGT00550000074465 HOGENOM:HOG000293211
EMBL:U89245 EMBL:AF001271 EMBL:AF001272 PIR:T15211
RefSeq:NP_491932.1 UniGene:Cel.7359 ProteinModelPortal:O02482
SMR:O02482 DIP:DIP-27333N IntAct:O02482 MINT:MINT-1056160
STRING:O02482 PaxDb:O02482 EnsemblMetazoa:W02D3.9.1
EnsemblMetazoa:W02D3.9.2 GeneID:172394 KEGG:cel:CELE_W02D3.9
UCSC:W02D3.9.2 CTD:172394 WormBase:W02D3.9 InParanoid:O02482
OMA:FDDSLIV NextBio:875325 Uniprot:O02482
Length = 612
Score = 102 (41.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 51/217 (23%), Positives = 87/217 (40%)
Query: 21 CIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSL-CFKSGN-------ED 72
C A+ R +G GC+ +D++ D+ T V P+ SL C K ED
Sbjct: 326 CAATISRDNSRVYTGGKGCVKIWDVKESDISGATVVNRPPIASLDCLKENYIRSCKLFED 385
Query: 73 ---IIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFL-ACADDGGDVK 128
++ V +D+ LE+ + + + +P L AC DG ++
Sbjct: 386 GNTLLIGGEASTVALWDLTTETKTLDLET---DSQACYALAMSPDEKLLFACLADG-NIL 441
Query: 129 IIDIRQHCLYKSLRAGHS--SICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVN 186
I DI +L GH + C + K W SGGLD+ + WD ++ + ++
Sbjct: 442 IYDIHNKVKVGTL-PGHQDGASCLDLSKDGTKLW---SGGLDNSVRCWDLAQRK--EVAK 495
Query: 187 FGLPENNGNAGQCYNPAFVHAIAIPD--ADMLDKTNK 221
+ G C N +V A+ + + ++L T K
Sbjct: 496 HDFASQVFSLGCCPNDEWV-AVGMENNYVEVLSTTGK 531
Score = 64 (27.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 262 VNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 320
V + + +E+L +G ++ L T SCV F GK+ IS G D + W
Sbjct: 516 VGMENNYVEVLSTTGKEKYQL-------TQHESCVLSLKFAHSGKFFISTGKDNALNAW 567
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 99 (39.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 38/172 (22%), Positives = 67/172 (38%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKS 68
R + GH D F + +G+ W DL S ++L V L
Sbjct: 195 RVISGHLGWVRALAVEPDNKWFASGAGDRTIKIW-DLASGRLRLTLTGHISTVRGLAVSP 253
Query: 69 GNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVK 128
+ + + K VK +D+ + + Y+ + + + +P L G +
Sbjct: 254 RHPYLFSCAEDKMVKCWDLETN---KVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVAR 310
Query: 129 IIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
+ D+R L +GH+ S + P +VI+G LDS + MWD + G+
Sbjct: 311 VWDMRTRSNIHVL-SGHTGTVSELVCQEADP-QVITGSLDSTVRMWDLAAGK 360
Score = 65 (27.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 19/57 (33%), Positives = 25/57 (43%)
Query: 266 DAEMEILDQSGGKRLH-LDYSVG-GHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 320
+ M D G R LD + G A S + S F + G LI G DK +K+W
Sbjct: 430 NGSMSFWDWKTGHRFQSLDTTAQPGSLQAESGIFTSTFDQSGSRLICGEADKTIKIW 486
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 92 (37.4 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 44/169 (26%), Positives = 74/169 (43%)
Query: 11 LRGHKATATCCIASRDRPGFVASSG-EDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSG 69
L+G K TC S D G + G EDG I F L S + + + +TSL +
Sbjct: 61 LQGLKHEVTCLCPSPD--GLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITSLKYDQL 118
Query: 70 NEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKI 129
+ S ++ +DV + L+ + K+ I Q + + + L + VK
Sbjct: 119 GGRLASGSKDTDIIVWDVINESGLYRLKGH---KDAITQALFLREKNLLVTSGKDTMVKW 175
Query: 130 IDI-RQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFS 177
D+ QHC +K++ GH + + + + +I+G DS+L WD S
Sbjct: 176 WDLDTQHC-FKTM-VGHRTEVWGLVLVSEEK-RLITGASDSELRAWDIS 221
Score = 62 (26.9 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 296 VAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 330
V + F + + G D+ +K WD +F+ +QT
Sbjct: 636 VMYLRFVPKSHLFFTAGKDRKIKQWDADKFEHIQT 670
Score = 60 (26.2 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 281 HLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSR 324
H+ ++ GH C+A S G+ Y++S +DK +++W+ +R
Sbjct: 667 HIQ-TLEGHHQEIWCLAVSPSGD---YVVSSSHDKSLRLWERTR 706
Score = 57 (25.1 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 216 LDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILD 273
+DKT +I D V++V I S+ I K K +K ++ +K+N + E E L+
Sbjct: 287 VDKTGRILACHGTDSVLEVFCILSKEEIQ--KKMDKKMKKAKKKAKLNSCNEEEEDLE 342
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 84 (34.6 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 24/94 (25%), Positives = 43/94 (45%)
Query: 94 RPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQ 153
RP++++ + E+N I +P LA D +KI ++Q L+A HS +++
Sbjct: 349 RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQA-HSKEIYTIK 407
Query: 154 FIPWKPWE--------VISGGLDSKLVMWDFSKG 179
+ P P + S DS + +WD +G
Sbjct: 408 WSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRG 441
Score = 65 (27.9 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
D+ + + D G +H ++ H VAFS GKYL SG DK V +W+
Sbjct: 430 DSTVRLWDVDRGVCIH---TLTKHQEPVYSVAFS---PDGKYLASGSFDKCVHIWN 479
Score = 54 (24.1 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 25/101 (24%), Positives = 38/101 (37%)
Query: 3 DAEAKPRR---LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNG 59
D E P + LRGH++ C + + SG+ W +L T +
Sbjct: 163 DVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIW-NLNENSNSGSTQL--- 218
Query: 60 PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYN 100
V C + G D V S K+V S D + + SY+
Sbjct: 219 -VLRHCIREGGHD---VPSNKDVTSLDWNSDGTLLATGSYD 255
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 81 (33.6 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 23/94 (24%), Positives = 43/94 (45%)
Query: 94 RPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQ 153
RP++++ + E+N I +P LA D +KI ++Q +L+A H +++
Sbjct: 346 RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQA-HRKEIYTIK 404
Query: 154 FIPWKPWE--------VISGGLDSKLVMWDFSKG 179
+ P P + S DS + +WD +G
Sbjct: 405 WSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQG 438
Score = 64 (27.6 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
D+ + + D G H ++ H VAFS GKYL SG DK V +W+
Sbjct: 427 DSTVRLWDMEQGVCTH---TLRKHQEPVYSVAFS---PDGKYLASGSFDKCVHIWN 476
Score = 58 (25.5 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 25/101 (24%), Positives = 39/101 (38%)
Query: 3 DAEAKPRR---LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNG 59
D E P + LRGH++ C + + SG+ W +L + T +
Sbjct: 160 DVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIW-NLNENGSRASTQL--- 215
Query: 60 PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYN 100
V C + G D V S K+V S D + + SY+
Sbjct: 216 -VLRHCIREGGHD---VPSNKDVTSLDWNSDGTLLATGSYD 252
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 119 (46.9 bits), Expect = 0.00028, P = 0.00028
Identities = 46/188 (24%), Positives = 84/188 (44%)
Query: 3 DAEAKPR-RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDL------RSKDVQLVTD 55
D P +LRGH + S+ + G + S +D IC +D+ +S D Q +
Sbjct: 165 DGACNPDLKLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFK 224
Query: 56 VGNGPVTSLCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPK 114
G V + + +E + V + + +D+ P++ +P++S + E+N + NP
Sbjct: 225 AHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPF 284
Query: 115 SSFL-ACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPW-EVISGG--LDSK 170
+ ++ A VK+ D+R+ L +L S V + W P E I L +
Sbjct: 285 NEWVVATGSTDKTVKLFDLRK--LSTALHT-FDSHKEEVFQVGWNPKNETILASCCLGRR 341
Query: 171 LVMWDFSK 178
L++WD S+
Sbjct: 342 LMVWDLSR 349
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 95 (38.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 43/179 (24%), Positives = 70/179 (39%)
Query: 2 TDAEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPV 61
T+ + L GH I S D +AS+ + W D + +Q + V
Sbjct: 325 TETGSLQHTLEGHSDLVRSVIFSHDSR-LLASASDSTVKIW-DTGTGSLQHTLEGHRDWV 382
Query: 62 TSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACA 121
S+ F ++ + S VK +D + LE + ++ + ++ + S LA A
Sbjct: 383 RSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGH---RDWVRSVIFSHDSQLLASA 439
Query: 122 DDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLV-MWDFSKG 179
D VKI D L +L GH SV F +++ D + V +WD KG
Sbjct: 440 SDDSTVKIWDTGTGSLQHTLE-GHRDWVRSVIFS--HDSRLLASASDDRTVRIWDTEKG 495
Score = 70 (29.7 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
D + I D G H ++ GH++ + V+FS + L S ND+ V++WD
Sbjct: 484 DRTVRIWDTEKGSHKH---TLEGHSSLVTSVSFS---HDSRLLASASNDQTVRIWD 533
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 85 (35.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 42/171 (24%), Positives = 74/171 (43%)
Query: 11 LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVT-SLCFKSG 69
LR H T ++ F+ S + C W D S + +L T G+ V ++ F +
Sbjct: 88 LRAHILPLTNVALNKAGSCFITGSYDRTCKVW-DTASGE-ELHTLEGHRNVVYAIAFNNP 145
Query: 70 NEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKI 129
D I ++G K+ + + + ++ + EI + NP+S+ +A K+
Sbjct: 146 YGDKI--ATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKL 203
Query: 130 IDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
DI+ +L GH + S+ F +I+G D +V+WD S GR
Sbjct: 204 WDIQSGEEVVTL-TGHLAEIISLSF-DTSGDRIITGSFDHTVVVWDASTGR 252
Score = 77 (32.2 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 35/137 (25%), Positives = 53/137 (38%)
Query: 193 NGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKP 252
+ +G+C H I D+ D T K+ A DG V N + K TK
Sbjct: 289 DATSGKCVATLTGHDDEILDS-CFDYTGKLIATASADGTARVYNATTR------KCITK- 340
Query: 253 LKGSQST-SKVNIRDAEMEILDQSGGKRLHL-DYSVG-------GHTAAASCVAFSMFGE 303
L+G + SK++ +L S K + D G GHT AF+
Sbjct: 341 LEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNY--- 397
Query: 304 RGKYLISGGNDKLVKVW 320
+G +I+G D ++W
Sbjct: 398 KGNIVITGSKDNSCRIW 414
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 99 (39.9 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 62/275 (22%), Positives = 108/275 (39%)
Query: 60 PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLA 119
PVT + F ++ S +K +D R L+ + + + I + LA
Sbjct: 45 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT---DSVQDISFDHSGKLLA 101
Query: 120 CADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
+K+ D + +++ GH SSV +P ++S D + MW+ G
Sbjct: 102 SCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTG 159
Query: 180 RPNKI-------VNFGLPENNGNA-GQCYNPAFVHA--IAIPD--ADMLDKTNKI-CVVA 226
K V P +G C N V +A + A++ + + + C+
Sbjct: 160 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 219
Query: 227 KGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSV 286
+ I SE S +K + KP S S RD +++ D S G L ++
Sbjct: 220 APESSYSSI---SEATGSETKKSGKPGPFLLSGS----RDKTIKMWDVSTGMCL---MTL 269
Query: 287 GGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
GH + V +F GK+++S +DK ++VWD
Sbjct: 270 VGHD---NWVRGVLFHSGGKFILSCADDKTLRVWD 301
Score = 59 (25.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 301 FGERGKYLISGGNDKLVKVWDC 322
F + Y+++G D+ VKVW+C
Sbjct: 323 FHKTAPYVVTGSVDQTVKVWEC 344
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 100 (40.3 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 31/121 (25%), Positives = 60/121 (49%)
Query: 61 VTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLAC 120
VT+L S ++ +I + + +++ P S R ++S ++ + + +P ++ LA
Sbjct: 64 VTALAITSDSKKLIAAFRSRLLTIYEI--P-SGRRIKSMKAHETPVITMTIDPTNTLLAT 120
Query: 121 ADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWK-PWEVISGGLDSKLVMWDFSKG 179
G VK+ DI + S R GH + S++ F + W + SG DS++ +WD +
Sbjct: 121 GGAEGLVKVWDIAGAYVTHSFR-GHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSS 179
Query: 180 R 180
R
Sbjct: 180 R 180
Score = 67 (28.6 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 288 GHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 330
GH++ + F G +L+SG DK V+VW+ + V+T
Sbjct: 187 GHSSVIRGLTFE---PTGSFLLSGSRDKTVQVWNIKKRSAVRT 226
Score = 64 (27.6 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 265 RDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSR 324
+D +++ D S G+ + + + GH +F+ F + L SG D+ +++W+
Sbjct: 485 QDKTIKLWDSSTGEVVGV---LRGHRRGVWACSFNPFSRQ---LASGSGDRTIRIWNVDT 538
Query: 325 FQGVQT 330
Q VQT
Sbjct: 539 QQCVQT 544
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 99 (39.9 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 35/172 (20%), Positives = 69/172 (40%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKS 68
R + GH C F +G+ W DL S ++L V + +
Sbjct: 166 RVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIW-DLASGKLKLSLTGHVSTVRGVAVST 224
Query: 69 GNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVK 128
+ + ++VK +D+ + + Y+ + + + +P LA + +
Sbjct: 225 KHPYLFSCGEDRQVKCWDLEYN---KVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTAR 281
Query: 129 IIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
I D+R +L GH++ +SV P ++I+G DS + +WD + G+
Sbjct: 282 IWDMRTKANVHTL-TGHTNTVASVVAQATNP-QIITGSHDSTVRLWDLAAGK 331
Score = 63 (27.2 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 20/88 (22%), Positives = 35/88 (39%)
Query: 285 SVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSXXXXXXXXXXXXX 344
++ GHT+ +C+A + G L+SGG++ + WD Q
Sbjct: 376 NISGHTSIVNCMAANSEG----VLVSGGDNGTMFFWDWRTGYNFQRFQAPVQPGSMDSEA 431
Query: 345 XXXXWLCTTPTESENLVVCDTSKVVKVY 372
+C + S L+ + K +KVY
Sbjct: 432 GIFA-MCFDQSGSR-LITAEADKTIKVY 457
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 111 (44.1 bits), Expect = 0.00034, P = 0.00034
Identities = 45/175 (25%), Positives = 80/175 (45%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGP-VTSLCFK 67
R LRGH + + S D F S DG + +DL + VG+ V S+ F
Sbjct: 16 RALRGHSHFVSDVVISSDGQ-FALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFS 73
Query: 68 SGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGD- 126
S N I+ S K +K ++ + ++ +++ E ++ + +P SS G D
Sbjct: 74 SDNRQIVSGSRDKTIKLWNTLGVCKYT-VQDESHS-EWVSCVRFSPNSSNPIIVSCGWDK 131
Query: 127 -VKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
VK+ ++ +C K+ GH+ ++V P SGG D + ++WD ++G+
Sbjct: 132 LVKVWNLA-NCKLKTNHIGHTGYLNTVTVSPDGSL-CASGGKDGQAMLWDLNEGK 184
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 96 (38.9 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 283 DYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 330
++++ GH +C+ + G++ YLISG +D+LVK+WD VQT
Sbjct: 149 NFTLEGHEKGVNCIDYYSGGDK-PYLISGADDRLVKIWDYQNKTCVQT 195
Score = 70 (29.7 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 23/146 (15%), Positives = 59/146 (40%)
Query: 37 DGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPL 96
+G +C ++ ++ + +V + PV + F + ++ + +++ F+ + + +
Sbjct: 7 NGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYN---TLERV 63
Query: 97 ESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIP 156
+ + + I I +P F+ + D +K+ D + + GH+ + P
Sbjct: 64 HMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINP 123
Query: 157 WKPWEVISGGLDSKLVMWDFSKGRPN 182
+ S LD + +W PN
Sbjct: 124 KDNNQFASASLDRTIKVWQLGSSSPN 149
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 113 (44.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 45/184 (24%), Positives = 79/184 (42%)
Query: 5 EAKPR-RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQ-LVTDVGN---- 58
E +P RLRGH+ + + G++ S+ +D IC +D+ + + V D N
Sbjct: 170 ECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTG 229
Query: 59 --GPVTSLCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKS 115
V + + +E + V+ +++ +D + +P + + + E+N + NP S
Sbjct: 230 HTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYS 289
Query: 116 SF-LACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMW 174
F LA V + D+R L H VQ+ P + S G D +L +W
Sbjct: 290 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 349
Query: 175 DFSK 178
D SK
Sbjct: 350 DLSK 353
Score = 46 (21.3 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 308 LISGGNDKLVKVWDCSRFQGVQTS 331
L S G D+ + VWD S+ Q++
Sbjct: 337 LASSGTDRRLHVWDLSKIGEEQST 360
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 111 (44.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 42/184 (22%), Positives = 80/184 (43%)
Query: 1 MTDAEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNG- 59
+T K + + H + + + + +A+ G+D C ++ S QL D+ G
Sbjct: 6 VTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDD---CRVNVWSV-AQLRHDLLTGH 61
Query: 60 --PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF 117
P+ SL + E I+ S ++ +D+ R L + N I + +P SF
Sbjct: 62 TTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKAN---ICSLDFHPYGSF 118
Query: 118 LACADDGGDVKIIDIRQH-CLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDF 176
+A D+K+ D+R+ C++K H+ ++F P W + S D + +WD
Sbjct: 119 VASGSLDTDIKLWDVRRKGCIFKY--KSHTQAVRCLRFSPDGKW-LASAADDHTVKLWDL 175
Query: 177 SKGR 180
+ G+
Sbjct: 176 TAGK 179
Score = 53 (23.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 16/64 (25%), Positives = 30/64 (46%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKL-VKVWDCSR 324
D +++ D + GK + + GH + V F E YL++ G+ + ++ WD +
Sbjct: 167 DHTVKLWDLTAGKVM---FEFTGHYGPVNVVEFHPSIE---YLLASGSSSMTIRFWDLEK 220
Query: 325 FQGV 328
F V
Sbjct: 221 FHVV 224
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 100 (40.3 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 63/275 (22%), Positives = 110/275 (40%)
Query: 60 PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLA 119
PVT + F ++ S +K +D R L+ + + E+I+ + LA
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDIS---FDHSGKLLA 166
Query: 120 CADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
+K+ D + +++ GH SSV +P ++S D + MW+ G
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTG 224
Query: 180 RPNKI-------VNFGLPENNGNA-GQCYNPAFVHA--IAIPD--ADMLDKTNKI-CVVA 226
K V P +G C N V +A + A++ + + + C+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 227 KGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSV 286
+ I SE S +K + KP S S RD +++ D S G L ++
Sbjct: 285 APESSYSSI---SEATGSETKKSGKPGPFLLSGS----RDKTIKMWDVSTGMCL---MTL 334
Query: 287 GGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
GH + V +F GK+++S +DK ++VWD
Sbjct: 335 VGHD---NWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 59 (25.8 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 301 FGERGKYLISGGNDKLVKVWDC 322
F + Y+++G D+ VKVW+C
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWEC 409
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 81 (33.6 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 320
D + ILD G+ + Y++ GHT A + VAFS G++ +GG+D+ + VW
Sbjct: 249 DRTIRILDLLEGRPI---YTLTGHTDAVNAVAFSRDGDK---FATGGSDRQLLVW 297
Score = 79 (32.9 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 32/124 (25%), Positives = 54/124 (43%)
Query: 58 NGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF 117
N V S F + + S K V+ +DV S + ++ + Q+ +P +
Sbjct: 144 NNWVRSAKFSPNGKLVATASDDKSVRIYDVD---SGECVRTFTEERAAPRQLAWHPWGNM 200
Query: 118 LACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFS 177
LA A +KI D+ L + L HS+ + V F P + ++SG D + + D
Sbjct: 201 LAVALGCNRIKIFDVSGSQLLQ-LYVVHSAPVNDVAFHPSGHF-LLSGSDDRTIRILDLL 258
Query: 178 KGRP 181
+GRP
Sbjct: 259 EGRP 262
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 41/166 (24%), Positives = 72/166 (43%)
Query: 11 LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKD-VQLVTDVGNGPVTSLCFKSG 69
L H C S D +AS G+D + +D S + + TD G G T + F S
Sbjct: 140 LNRHTNWVRCARFSPDGR-LIASCGDDRTVRLWDTSSHQCINIFTDYG-GSATFVDFNSS 197
Query: 70 NEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKI 129
I + +K +D+ + ++ Y + +N +P ++L +KI
Sbjct: 198 GTCIASSGADNTIKIWDIRTN---KLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKI 254
Query: 130 IDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVI-SGGLDSKLVMW 174
+D+ + L +L GH +V F + ++ SGG DS+++MW
Sbjct: 255 LDLLEGRLIYTLH-GHKGPVLTVTFS--RDGDLFASGGADSQVLMW 297
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 96 (38.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 283 DYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 330
++++ GH +C+ + G++ YLISG +D+LVK+WD VQT
Sbjct: 178 NFTLEGHEKGVNCIDYYSGGDK-PYLISGADDRLVKIWDYQNKTCVQT 224
Score = 71 (30.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 26/155 (16%), Positives = 63/155 (40%)
Query: 28 PGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDV 87
P +AS +G +C ++ ++ + +V + PV + F + ++ + +++ F+
Sbjct: 28 PWMLASL-YNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNY 86
Query: 88 HMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSS 147
+ + + + + + I I +P F+ + D +K+ D + + GH+
Sbjct: 87 N---TLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTH 143
Query: 148 ICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPN 182
+ P + S LD + +W PN
Sbjct: 144 YVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPN 178
>RGD|628746 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISO] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:628746
GO:GO:0006886 GO:GO:0000139 GO:GO:0030117 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 CTD:9276 HOVERGEN:HBG051076
InterPro:IPR016453 PIRSF:PIRSF005567 GO:GO:0030663 EMBL:AF002705
IPI:IPI00231953 RefSeq:NP_068533.1 UniGene:Rn.37178
ProteinModelPortal:O35142 IntAct:O35142 PRIDE:O35142 GeneID:60384
KEGG:rno:60384 NextBio:612083 Genevestigator:O35142 Uniprot:O35142
Length = 905
Score = 96 (38.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 283 DYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 330
++++ GH +C+ + G++ YLISG +D+LVK+WD VQT
Sbjct: 178 NFTLEGHEKGVNCIDYYSGGDK-PYLISGADDRLVKIWDYQNKTCVQT 224
Score = 71 (30.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 26/155 (16%), Positives = 63/155 (40%)
Query: 28 PGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDV 87
P +AS +G +C ++ ++ + +V + PV + F + ++ + +++ F+
Sbjct: 28 PWMLASL-YNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNY 86
Query: 88 HMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSS 147
+ + + + + + I I +P F+ + D +K+ D + + GH+
Sbjct: 87 N---TLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTH 143
Query: 148 ICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPN 182
+ P + S LD + +W PN
Sbjct: 144 YVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPN 178
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 96 (38.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 283 DYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 330
++++ GH +C+ + G++ YLISG +D+LVK+WD VQT
Sbjct: 178 NFTLEGHEKGVNCIDYYSGGDK-PYLISGADDRLVKIWDYQNKTCVQT 224
Score = 71 (30.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 26/155 (16%), Positives = 63/155 (40%)
Query: 28 PGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDV 87
P +AS +G +C ++ ++ + +V + PV + F + ++ + +++ F+
Sbjct: 28 PWMLASL-YNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNY 86
Query: 88 HMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSS 147
+ + + + + + I I +P F+ + D +K+ D + + GH+
Sbjct: 87 N---TLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTH 143
Query: 148 ICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPN 182
+ P + S LD + +W PN
Sbjct: 144 YVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPN 178
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 96 (38.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 283 DYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 330
++++ GH +C+ + G++ YLISG +D+LVK+WD VQT
Sbjct: 178 NFTLEGHEKGVNCIDYYSGGDK-PYLISGADDRLVKIWDYQNKTCVQT 224
Score = 71 (30.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 26/155 (16%), Positives = 63/155 (40%)
Query: 28 PGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDV 87
P +AS +G +C ++ ++ + +V + PV + F + ++ + +++ F+
Sbjct: 28 PWMLASL-YNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNY 86
Query: 88 HMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSS 147
+ + + + + + I I +P F+ + D +K+ D + + GH+
Sbjct: 87 N---TLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTH 143
Query: 148 ICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPN 182
+ P + S LD + +W PN
Sbjct: 144 YVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPN 178
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 96 (38.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 283 DYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 330
++++ GH +C+ + G++ YLISG +D+LVK+WD VQT
Sbjct: 178 NFTLEGHEKGVNCIDYYSGGDK-PYLISGADDRLVKIWDYQNKTCVQT 224
Score = 71 (30.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 26/155 (16%), Positives = 63/155 (40%)
Query: 28 PGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDV 87
P +AS +G +C ++ ++ + +V + PV + F + ++ + +++ F+
Sbjct: 28 PWMLASL-YNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNY 86
Query: 88 HMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSS 147
+ + + + + + I I +P F+ + D +K+ D + + GH+
Sbjct: 87 N---TLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTH 143
Query: 148 ICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPN 182
+ P + S LD + +W PN
Sbjct: 144 YVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPN 178
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 96 (38.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 283 DYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 330
++++ GH +C+ + G++ YLISG +D+LVK+WD VQT
Sbjct: 178 NFTLEGHEKGVNCIDYYSGGDK-PYLISGADDRLVKIWDYQNKTCVQT 224
Score = 71 (30.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 26/155 (16%), Positives = 63/155 (40%)
Query: 28 PGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDV 87
P +AS +G +C ++ ++ + +V + PV + F + ++ + +++ F+
Sbjct: 28 PWMLASL-YNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNY 86
Query: 88 HMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSS 147
+ + + + + + I I +P F+ + D +K+ D + + GH+
Sbjct: 87 N---TLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTH 143
Query: 148 ICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPN 182
+ P + S LD + +W PN
Sbjct: 144 YVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPN 178
>UNIPROTKB|Q7ZYQ6 [details] [associations]
symbol:dcaf13 "DDB1- and CUL4-associated factor 13"
species:8355 "Xenopus laevis" [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0030529 GO:GO:0006364 GO:GO:0080008 CTD:25879
HOVERGEN:HBG056998 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:BC042261 RefSeq:NP_001080629.1 UniGene:Xl.21976
ProteinModelPortal:Q7ZYQ6 GeneID:380321 KEGG:xla:380321
Xenbase:XB-GENE-5791341 Uniprot:Q7ZYQ6
Length = 445
Score = 114 (45.2 bits), Expect = 0.00051, Sum P(2) = 0.00050
Identities = 59/212 (27%), Positives = 86/212 (40%)
Query: 6 AKP--RRLRGHKATATCCIASRDRPGFVASSGE-DGCICWFDLRSKDVQLVTDVGNGPVT 62
AKP L GH+ C IA + SG DG + ++L ++ +G V
Sbjct: 55 AKPFIASLDGHRDGVNC-IAKHPKSLSTVLSGACDGEVKIWNLTKRECSRTIQAHDGFVR 113
Query: 63 SLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYN--YNKEEINQIVCNPKSS-FLA 119
LC + V K VK + + P +E K I + K + F
Sbjct: 114 GLCVRFCGTSFFTVGDDKTVKQWAMESPGYGEKVEPMRTILGKTVFTGIDHHVKDAVFAT 173
Query: 120 CADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
C G V I D ++ +S G SI SSV+F P + + S G D +V++D K
Sbjct: 174 C---GQQVDIWDEQRSAPMRSYAWGVDSI-SSVRFNPVETHILSSCGTDRSIVLYDKRKP 229
Query: 180 RPNKIVNFGLPENNGNAGQCYNP--AFVHAIA 209
P K + + E NA C+NP AF+ A
Sbjct: 230 TPLKKI---ILEMRTNA-LCWNPMEAFIFTAA 257
Score = 44 (20.5 bits), Expect = 0.00051, Sum P(2) = 0.00050
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 281 HLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 320
++D V H S V + GK L+S DK ++++
Sbjct: 270 YMDSPVKVHMDHVSAVLDVDYSPTGKELVSASFDKSIRIF 309
Score = 42 (19.8 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 7/32 (21%), Positives = 15/32 (46%)
Query: 289 HTAAASCVAFSMFGERGKYLISGGNDKLVKVW 320
HT V + KY++ G ++ +++W
Sbjct: 321 HTKRMQHVTCVRWSADNKYVLCGSDEMNIRIW 352
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 96 (38.9 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 283 DYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 330
++++ GH +C+ + G++ YLISG +D+LVK+WD VQT
Sbjct: 178 NFTLEGHEKGVNCIDYYSGGDK-PYLISGADDRLVKIWDYQNKTCVQT 224
Score = 71 (30.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 26/155 (16%), Positives = 63/155 (40%)
Query: 28 PGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDV 87
P +AS +G +C ++ ++ + +V + PV + F + ++ + +++ F+
Sbjct: 28 PWMLASL-YNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNY 86
Query: 88 HMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSS 147
+ + + + + + I I +P F+ + D +K+ D + + GH+
Sbjct: 87 N---TLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTH 143
Query: 148 ICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPN 182
+ P + S LD + +W PN
Sbjct: 144 YVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPN 178
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 99 (39.9 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 62/275 (22%), Positives = 108/275 (39%)
Query: 60 PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLA 119
PVT + F ++ S +K +D R L+ + + + I + LA
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT---DSVQDISFDHTGKLLA 166
Query: 120 CADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
+K+ D + +++ GH SSV +P ++S D + MW+ G
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTG 224
Query: 180 RPNKI-------VNFGLPENNGNA-GQCYNPAFVHA--IAIPD--ADMLDKTNKI-CVVA 226
K V P +G C N V +A + A++ + + + C+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 227 KGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSV 286
+ I SE S +K + KP S S RD +++ D S G L ++
Sbjct: 285 APESSYSTI---SEATGSETKKSGKPGPFLLSGS----RDKTIKMWDISTGMCL---MTL 334
Query: 287 GGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
GH + V +F GK+++S +DK ++VWD
Sbjct: 335 VGHD---NWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 59 (25.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 301 FGERGKYLISGGNDKLVKVWDC 322
F + Y+++G D+ VKVW+C
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWEC 409
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 99 (39.9 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 62/275 (22%), Positives = 108/275 (39%)
Query: 60 PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLA 119
PVT + F ++ S +K +D R L+ + + + I + LA
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT---DSVQDISFDHSGKLLA 166
Query: 120 CADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
+K+ D + +++ GH SSV +P ++S D + MW+ G
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTG 224
Query: 180 RPNKI-------VNFGLPENNGNA-GQCYNPAFVHA--IAIPD--ADMLDKTNKI-CVVA 226
K V P +G C N V +A + A++ + + + C+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 227 KGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSV 286
+ I SE S +K + KP S S RD +++ D S G L ++
Sbjct: 285 APESSYSSI---SEATGSETKKSGKPGPFLLSGS----RDKTIKMWDVSTGMCL---MTL 334
Query: 287 GGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
GH + V +F GK+++S +DK ++VWD
Sbjct: 335 VGHD---NWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 59 (25.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 301 FGERGKYLISGGNDKLVKVWDC 322
F + Y+++G D+ VKVW+C
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWEC 409
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 99 (39.9 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 62/275 (22%), Positives = 108/275 (39%)
Query: 60 PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLA 119
PVT + F ++ S +K +D R L+ + + + I + LA
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT---DSVQDISFDHSGKLLA 166
Query: 120 CADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
+K+ D + +++ GH SSV +P ++S D + MW+ G
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTG 224
Query: 180 RPNKI-------VNFGLPENNGNA-GQCYNPAFVHA--IAIPD--ADMLDKTNKI-CVVA 226
K V P +G C N V +A + A++ + + + C+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 227 KGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSV 286
+ I SE S +K + KP S S RD +++ D S G L ++
Sbjct: 285 APESSYSSI---SEATGSETKKSGKPGPFLLSGS----RDKTIKMWDVSTGMCL---MTL 334
Query: 287 GGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
GH + V +F GK+++S +DK ++VWD
Sbjct: 335 VGHD---NWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 59 (25.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 301 FGERGKYLISGGNDKLVKVWDC 322
F + Y+++G D+ VKVW+C
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWEC 409
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 99 (39.9 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 62/275 (22%), Positives = 108/275 (39%)
Query: 60 PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLA 119
PVT + F ++ S +K +D R L+ + + + I + LA
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT---DSVQDISFDHSGKLLA 166
Query: 120 CADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
+K+ D + +++ GH SSV +P ++S D + MW+ G
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTG 224
Query: 180 RPNKI-------VNFGLPENNGNA-GQCYNPAFVHA--IAIPD--ADMLDKTNKI-CVVA 226
K V P +G C N V +A + A++ + + + C+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 227 KGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSV 286
+ I SE S +K + KP S S RD +++ D S G L ++
Sbjct: 285 APESSYSSI---SEATGSETKKSGKPGPFLLSGS----RDKTIKMWDVSTGMCL---MTL 334
Query: 287 GGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
GH + V +F GK+++S +DK ++VWD
Sbjct: 335 VGHD---NWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 59 (25.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 301 FGERGKYLISGGNDKLVKVWDC 322
F + Y+++G D+ VKVW+C
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWEC 409
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 99 (39.9 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 62/275 (22%), Positives = 108/275 (39%)
Query: 60 PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLA 119
PVT + F ++ S +K +D R L+ + + + I + LA
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT---DSVQDISFDHSGKLLA 166
Query: 120 CADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
+K+ D + +++ GH SSV +P ++S D + MW+ G
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTG 224
Query: 180 RPNKI-------VNFGLPENNGNA-GQCYNPAFVHA--IAIPD--ADMLDKTNKI-CVVA 226
K V P +G C N V +A + A++ + + + C+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 227 KGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSV 286
+ I SE S +K + KP S S RD +++ D S G L ++
Sbjct: 285 APESSYSSI---SEATGSETKKSGKPGPFLLSGS----RDKTIKMWDVSTGMCL---MTL 334
Query: 287 GGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
GH + V +F GK+++S +DK ++VWD
Sbjct: 335 VGHD---NWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 59 (25.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 301 FGERGKYLISGGNDKLVKVWDC 322
F + Y+++G D+ VKVW+C
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWEC 409
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 99 (39.9 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 62/275 (22%), Positives = 108/275 (39%)
Query: 60 PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLA 119
PVT + F ++ S +K +D R L+ + + + I + LA
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT---DSVQDISFDHSGKLLA 166
Query: 120 CADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
+K+ D + +++ GH SSV +P ++S D + MW+ G
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTG 224
Query: 180 RPNKI-------VNFGLPENNGNA-GQCYNPAFVHA--IAIPD--ADMLDKTNKI-CVVA 226
K V P +G C N V +A + A++ + + + C+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 227 KGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSV 286
+ I SE S +K + KP S S RD +++ D S G L ++
Sbjct: 285 APESSYSSI---SEATGSETKKSGKPGPFLLSGS----RDKTIKMWDVSTGMCL---MTL 334
Query: 287 GGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
GH + V +F GK+++S +DK ++VWD
Sbjct: 335 VGHD---NWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 59 (25.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 301 FGERGKYLISGGNDKLVKVWDC 322
F + Y+++G D+ VKVW+C
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWEC 409
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 99 (39.9 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 62/275 (22%), Positives = 108/275 (39%)
Query: 60 PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLA 119
PVT + F ++ S +K +D R L+ + + + I + LA
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT---DSVQDISFDHSGKLLA 166
Query: 120 CADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
+K+ D + +++ GH SSV +P ++S D + MW+ G
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMP-NGDHIVSAARDKTIKMWEVQTG 224
Query: 180 RPNKI-------VNFGLPENNGNA-GQCYNPAFVHA--IAIPD--ADMLDKTNKI-CVVA 226
K V P +G C N V +A + A++ + + + C+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 227 KGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSV 286
+ I SE S +K + KP S S RD +++ D S G L ++
Sbjct: 285 APESSYSSI---SEATGSETKKSGKPGPFLLSGS----RDKTIKMWDVSTGMCL---MTL 334
Query: 287 GGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
GH + V +F GK+++S +DK ++VWD
Sbjct: 335 VGHD---NWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 59 (25.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 301 FGERGKYLISGGNDKLVKVWDC 322
F + Y+++G D+ VKVW+C
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWEC 409
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 99 (39.9 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 62/275 (22%), Positives = 108/275 (39%)
Query: 60 PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLA 119
PVT + F ++ S +K +D R L+ + + + I + LA
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT---DSVQDISFDHSGKLLA 166
Query: 120 CADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
+K+ D + +++ GH SSV +P ++S D + MW+ G
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTG 224
Query: 180 RPNKI-------VNFGLPENNGNA-GQCYNPAFVHA--IAIPD--ADMLDKTNKI-CVVA 226
K V P +G C N V +A + A++ + + + C+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 227 KGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSV 286
+ I SE S +K + KP S S RD +++ D S G L ++
Sbjct: 285 APESSYSSI---SEATGSETKKSGKPGPFLLSGS----RDKTIKMWDVSTGMCL---MTL 334
Query: 287 GGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
GH + V +F GK+++S +DK ++VWD
Sbjct: 335 VGHD---NWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 59 (25.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 301 FGERGKYLISGGNDKLVKVWDC 322
F + Y+++G D+ VKVW+C
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWEC 409
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 99 (39.9 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 62/275 (22%), Positives = 108/275 (39%)
Query: 60 PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLA 119
PVT + F ++ S +K +D R L+ + + + I + LA
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT---DSVQDISFDHSGKLLA 166
Query: 120 CADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
+K+ D + +++ GH SSV +P ++S D + MW+ G
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTG 224
Query: 180 RPNKI-------VNFGLPENNGNA-GQCYNPAFVHA--IAIPD--ADMLDKTNKI-CVVA 226
K V P +G C N V +A + A++ + + + C+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 227 KGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSV 286
+ I SE S +K + KP S S RD +++ D S G L ++
Sbjct: 285 APESSYSSI---SEATGSETKKSGKPGPFLLSGS----RDKTIKMWDVSTGMCL---MTL 334
Query: 287 GGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
GH + V +F GK+++S +DK ++VWD
Sbjct: 335 VGHD---NWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 59 (25.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 301 FGERGKYLISGGNDKLVKVWDC 322
F + Y+++G D+ VKVW+C
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWEC 409
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 99 (39.9 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 62/275 (22%), Positives = 108/275 (39%)
Query: 60 PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLA 119
PVT + F ++ S +K +D R L+ + + + I + LA
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT---DSVQDISFDHSGKLLA 166
Query: 120 CADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
+K+ D + +++ GH SSV +P ++S D + MW+ G
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTG 224
Query: 180 RPNKI-------VNFGLPENNGNA-GQCYNPAFVHA--IAIPD--ADMLDKTNKI-CVVA 226
K V P +G C N V +A + A++ + + + C+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 227 KGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSV 286
+ I SE S +K + KP S S RD +++ D S G L ++
Sbjct: 285 APESSYSSI---SEATGSETKKSGKPGPFLLSGS----RDKTIKMWDVSTGMCL---MTL 334
Query: 287 GGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
GH + V +F GK+++S +DK ++VWD
Sbjct: 335 VGHD---NWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 59 (25.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 301 FGERGKYLISGGNDKLVKVWDC 322
F + Y+++G D+ VKVW+C
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWEC 409
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 96 (38.9 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 283 DYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 330
++++ GH +C+ + G++ YLISG +D+LVK+WD VQT
Sbjct: 149 NFTLEGHEKGVNCIDYYSGGDK-PYLISGADDRLVKIWDYQNKTCVQT 195
Score = 70 (29.7 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 23/146 (15%), Positives = 59/146 (40%)
Query: 37 DGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPL 96
+G +C ++ ++ + +V + PV + F + ++ + +++ F+ + + +
Sbjct: 7 NGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYN---TLERV 63
Query: 97 ESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIP 156
+ + + I I +P F+ + D +K+ D + + GH+ + P
Sbjct: 64 HMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINP 123
Query: 157 WKPWEVISGGLDSKLVMWDFSKGRPN 182
+ S LD + +W PN
Sbjct: 124 KDNNQFASASLDRTIKVWQLGSSSPN 149
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 110 (43.8 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 44/184 (23%), Positives = 79/184 (42%)
Query: 5 EAKPR-RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRS--KDVQLVTD----VG 57
E P RLRGH+ + + G + S+ +D +C +D+ + K+ ++V G
Sbjct: 164 ECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTG 223
Query: 58 NGPVTS-LCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKS 115
+ V + + +E + V+ +++ +D + +P S + + E+N + NP S
Sbjct: 224 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYS 283
Query: 116 SF-LACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMW 174
F LA V + D+R L H V + P + S G D +L +W
Sbjct: 284 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 343
Query: 175 DFSK 178
D SK
Sbjct: 344 DLSK 347
Score = 47 (21.6 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 308 LISGGNDKLVKVWDCSRFQGVQTS 331
L S G D+ + VWD S+ Q++
Sbjct: 331 LASSGTDRRLNVWDLSKIGEEQSA 354
>ZFIN|ZDB-GENE-041010-198 [details] [associations]
symbol:thoc6 "THO complex 6 homolog (Drosophila)"
species:7955 "Danio rerio" [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041010-198 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 KO:K13175 EMBL:BC083222
IPI:IPI00502677 RefSeq:NP_001006095.1 UniGene:Dr.77715
ProteinModelPortal:Q5XJS5 STRING:Q5XJS5 PRIDE:Q5XJS5
GeneID:100004014 KEGG:dre:100004014 CTD:79228 HOGENOM:HOG000008085
HOVERGEN:HBG079643 InParanoid:Q5XJS5 OrthoDB:EOG42V8GK
NextBio:20786086 ArrayExpress:Q5XJS5 Uniprot:Q5XJS5
Length = 323
Score = 114 (45.2 bits), Expect = 0.00063, P = 0.00063
Identities = 37/132 (28%), Positives = 61/132 (46%)
Query: 58 NGPVTSLC------FKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKE--EINQI 109
+GPV SL +GN +I S + +K A+W +Y + E EIN +
Sbjct: 60 DGPVFSLLSTESHLLSAGNGEISAWSWAELIKK---STKAAWTRKPNYETSLEIPEINAM 116
Query: 110 VCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDS 169
+ NPK + L ++ I+D+ +KS+ GH+ + F + E++SGG D
Sbjct: 117 IINPKDNNLIVGGGDNNIHIMDMETGT-FKSVLKGHTDYIHCLSFKE-REGEILSGGEDG 174
Query: 170 KLVMWDFSKGRP 181
+ +WD RP
Sbjct: 175 AVRIWDSRTNRP 186
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 109 (43.4 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 39/182 (21%), Positives = 77/182 (42%)
Query: 1 MTDAEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCI-CWFDLRSKDVQLVTDVGNG 59
+T K + + H + + + + +A+ G+D + W + V +T
Sbjct: 6 VTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTG-HTT 64
Query: 60 PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLA 119
P+ SL + E I+ S ++ +D+ R L + N I + +P SF+A
Sbjct: 65 PIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKAN---ICSLDFHPYGSFVA 121
Query: 120 CADDGGDVKIIDIRQH-CLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
D+K+ D+R+ C++K H+ ++F P W + S D + +WD +
Sbjct: 122 SGSLDTDIKLWDVRRKGCIFKY--KSHTQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA 178
Query: 179 GR 180
G+
Sbjct: 179 GK 180
Score = 53 (23.7 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 16/64 (25%), Positives = 30/64 (46%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKL-VKVWDCSR 324
D +++ D + GK + + GH + V F E YL++ G+ + ++ WD +
Sbjct: 168 DHTVKLWDLTAGKVM---FEFTGHYGPVNVVEFHPSIE---YLLASGSSSMTIRFWDLEK 221
Query: 325 FQGV 328
F V
Sbjct: 222 FHVV 225
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 89 (36.4 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 44/169 (26%), Positives = 74/169 (43%)
Query: 11 LRGHKATATCCIASRDRPGFVASSG-EDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSG 69
L+G K TC S D G + G EDG I F L S + + + VTSL +
Sbjct: 61 LQGLKHEVTCLCPSPD--GLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAVTSLKYDQL 118
Query: 70 NEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKI 129
+ S ++ +DV + L+ + K+ I Q + + + L + VK
Sbjct: 119 GGRLASGSKDTDIIVWDVINESGLYRLKGH---KDAITQALFLREKNLLVSSGKDTMVKW 175
Query: 130 IDI-RQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFS 177
D+ QHC +K++ GH + + + + +I+G DS+L WD +
Sbjct: 176 WDLDTQHC-FKTV-VGHRTEVWGLVLVSEEK-RLITGASDSELRAWDIA 221
Score = 63 (27.2 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 296 VAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 330
V + F + + G D+ +K WD +F+ VQT
Sbjct: 636 VMYLKFVPKSHLFFTAGKDRKIKQWDADKFEHVQT 670
Score = 55 (24.4 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 216 LDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQS 275
+D+T +I D V++V + S I K K LK ++ +K+N E E L+ S
Sbjct: 287 VDRTGRILACHGTDSVLEVFRVLSIEEIQ--KKMDKKLKKARKKAKLNSGKEEEEDLEVS 344
>UNIPROTKB|C9JYB3 [details] [associations]
symbol:WDHD1 "WD repeat and HMG-box DNA-binding protein 1"
species:9606 "Homo sapiens" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0033044 "regulation of chromosome
organization" evidence=IEA] [GO:0070063 "RNA polymerase binding"
evidence=IEA] [GO:0070829 "heterochromatin maintenance"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 HGNC:HGNC:23170
EMBL:AL160471 HOGENOM:HOG000170076 IPI:IPI00879598
ProteinModelPortal:C9JYB3 SMR:C9JYB3 STRING:C9JYB3
Ensembl:ENST00000455555 ArrayExpress:C9JYB3 Bgee:C9JYB3
Uniprot:C9JYB3
Length = 168
Score = 106 (42.4 bits), Expect = 0.00067, P = 0.00066
Identities = 49/176 (27%), Positives = 73/176 (41%)
Query: 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCI-CWFDLRSKDVQLVTDVGNGPVT 62
A KP R GH T + D F+ + G DG + W DL D + + +VG
Sbjct: 3 ATRKPMRY-GHTEGHTE-VCFDDSGSFIVTCGSDGDVRIWEDLDDDDPKFI-NVGE-KAY 58
Query: 63 SLCFKSGNEDIIYVSSGK-EVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACA 121
S KSG + VS+ +V +F +P L + N N +V N + +A
Sbjct: 59 SCALKSGKL-VTAVSNNTIQVHTFPEGVPDGI--LTRFTTNA---NHVVFNGDGTKIAAG 112
Query: 122 DDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFS 177
VKI+D+ K+ R GH + S+ F P K + S D + +W S
Sbjct: 113 SSDFLVKIVDVMDSSQQKTFR-GHDAPVLSLSFDP-KDIFLASASCDGSVRVWQIS 166
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 114 (45.2 bits), Expect = 0.00067, P = 0.00067
Identities = 32/126 (25%), Positives = 58/126 (46%)
Query: 61 VTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLAC 120
++S+ F + + S+ K +K + + R LE + KE I+ I + S +
Sbjct: 49 ISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGH---KEGISDIAWSQDSKLICS 105
Query: 121 ADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
A D +KI D+ + K+L+ GH V F P ++SG D + +WD + G
Sbjct: 106 ASDDKTIKIWDVESGKMVKTLK-GHKEYVFGVSFNPQSNL-IVSGSFDENVRIWDVNTGE 163
Query: 181 PNKIVN 186
K+++
Sbjct: 164 CTKMIS 169
>UNIPROTKB|F1P0W9 [details] [associations]
symbol:NEDD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000242 "pericentriolar material" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0045177 "apical part of cell" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0045177
GO:GO:0005932 GO:GO:0000242 GO:GO:0000922
GeneTree:ENSGT00390000001561 OMA:FSPIRDD EMBL:AADN02005960
EMBL:AADN02005961 EMBL:AADN02005962 IPI:IPI00592551
Ensembl:ENSGALT00000018716 Uniprot:F1P0W9
Length = 671
Score = 118 (46.6 bits), Expect = 0.00070, P = 0.00070
Identities = 37/159 (23%), Positives = 69/159 (43%)
Query: 21 CIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGK 80
C++ +VAS G D + +DL+S+ V VT + + N + Y++SG
Sbjct: 82 CVSLSSSSLYVASGGLDSTVHIWDLKSRRVHRSLKDHKDEVTCVAY---NWNDCYIASGS 138
Query: 81 EVKSFDVHMPASWRPLESYNYNKEE-INQIVCNP-KSSFLACADDGGDVKIIDIRQHCLY 138
+H + + YN + I + + K S L D G+V + D+ Y
Sbjct: 139 LSGEIILHSVTTNLSSTPFGYNSSQPIRHLKYSSFKKSLLGSVSDSGNVTLWDVNTQNPY 198
Query: 139 KSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFS 177
++ H + S + F P +++ GLD ++ ++D S
Sbjct: 199 RNFENTHKAPASEICFSPVNELLLVTVGLDKRINLYDTS 237
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 114 (45.2 bits), Expect = 0.00072, P = 0.00072
Identities = 43/196 (21%), Positives = 80/196 (40%)
Query: 7 KPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCF 66
+ RR +GH SR + S +D I +D R K + VT++CF
Sbjct: 132 RQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLE-SPFQVTAVCF 190
Query: 67 KSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGD 126
E +I EVK +D+ A L ++ + I + +P+ F+
Sbjct: 191 GDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHS---DTITGMSLSPEGDFILTNAMDNT 247
Query: 127 VKIIDIR-----QHCLYKSLRAGHSSICSSVQFIPWKPW--EVISGGLDSKLVMWDFSKG 179
+++ D+R + C+ K + + ++ W P ++ SG D + +WD +
Sbjct: 248 LRVWDVRPYAPGERCV-KVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTR 306
Query: 180 RPNKIVNFGLPENNGN 195
R + + LP +NG+
Sbjct: 307 R----ILYKLPGHNGS 318
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 109 (43.4 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 46/184 (25%), Positives = 80/184 (43%)
Query: 5 EAKPR-RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRS--KDVQLVTD----VG 57
E P RLRGH+ + + G + S+ +D IC +D+ + K+ ++V G
Sbjct: 131 ECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTG 190
Query: 58 NGPVTS-LCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKS 115
+ V + + +E + V+ +++ +D + +P S + + E+N + NP S
Sbjct: 191 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 250
Query: 116 SF-LACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMW 174
F LA V + D+R L H VQ+ P + S G D +L +W
Sbjct: 251 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 310
Query: 175 DFSK 178
D SK
Sbjct: 311 DLSK 314
Score = 46 (21.3 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 308 LISGGNDKLVKVWDCSR 324
L S G D+ + VWD S+
Sbjct: 298 LASSGTDRRLNVWDLSK 314
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 92 (37.4 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 39/171 (22%), Positives = 69/171 (40%)
Query: 12 RGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGP-VTSLCFKSGN 70
R H+ +C + R ++ S ED L +V L+T G+ ++ CF
Sbjct: 357 RLHELPVSCIVMHPCRD-YLISCSEDRLWKMVGLPQGNV-LLTGSGHTDWLSGCCFHPSG 414
Query: 71 EDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKII 130
+ S +K +D++ LE +N+ C F+A A KI
Sbjct: 415 SKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCG---DFVASASLDMTSKIW 471
Query: 131 DIR-QHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
D+ + C Y GH+ +S++F P+ +++ D L +WD G+
Sbjct: 472 DVNSERCRYTLY--GHTDSVNSIEFFPFSNI-LLTASADKTLSVWDARTGK 519
Score = 70 (29.7 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 31/132 (23%), Positives = 56/132 (42%)
Query: 193 NGNAGQCYNPAFVHAIAIPDADMLDKTNKICVV-AKG-DGVVDVINIESELNISRSKSTT 250
+ G+C + H ++ DA + + I A+G + D + ++I S+
Sbjct: 514 DARTGKCEQSLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSG 573
Query: 251 KPLKGSQSTSKVNIRDAE--MEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYL 308
+ QS + A + +LD G+ +H + GH + V FS GE L
Sbjct: 574 NEVNFDQSGRVLAQASANGIIHLLDLKSGQ-IH---KLVGHESEVHSVVFSHLGEN---L 626
Query: 309 ISGGNDKLVKVW 320
SGG+D +++W
Sbjct: 627 YSGGSDGTIRLW 638
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 109 (43.4 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 44/184 (23%), Positives = 79/184 (42%)
Query: 5 EAKPR-RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRS--KDVQLVTD----VG 57
E P RLRGH+ + + G + S+ +D +C +D+ + K+ ++V G
Sbjct: 165 ECSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTG 224
Query: 58 NGPVTS-LCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKS 115
+ V + + +E + V+ +++ +D + +P S + + E+N + NP S
Sbjct: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYS 284
Query: 116 SF-LACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMW 174
F LA V + D+R L H V + P + S G D +L +W
Sbjct: 285 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 344
Query: 175 DFSK 178
D SK
Sbjct: 345 DLSK 348
Score = 47 (21.6 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 308 LISGGNDKLVKVWDCSRFQGVQTS 331
L S G D+ + VWD S+ Q++
Sbjct: 332 LASSGTDRRLNVWDLSKIGEEQSA 355
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 109 (43.4 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 47/187 (25%), Positives = 81/187 (43%)
Query: 5 EAKPR-RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRS--KDVQLVTD----VG 57
E P RLRGH+ + + G + S+ +D +C +D+ + K+ ++V G
Sbjct: 165 ECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTG 224
Query: 58 NGPVTS-LCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKS 115
+ V + + +E + V+ +++ +D + +P + + E+N + NP S
Sbjct: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYS 284
Query: 116 SF-LACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPW-EVI--SGGLDSKL 171
F LA V + D+R L L S Q + W P E I S G D +L
Sbjct: 285 EFILATGSADKTVALWDLRN--LKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRL 342
Query: 172 VMWDFSK 178
+WD SK
Sbjct: 343 NVWDLSK 349
Score = 47 (21.6 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 308 LISGGNDKLVKVWDCSRFQGVQTS 331
L S G D+ + VWD S+ Q++
Sbjct: 333 LASSGTDRRLNVWDLSKIGEEQSA 356
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 115 (45.5 bits), Expect = 0.00080, P = 0.00080
Identities = 52/208 (25%), Positives = 92/208 (44%)
Query: 2 TDAEAKPR-RLRGHKATATCCIASRDRPGFVASSGEDGCI-CWFDLRS---KDVQLVTDV 56
+++ KP+ RL H T + G + S +D + CW DL + D V V
Sbjct: 170 SESPLKPKYRLTKHTQPCTSVCWNFLSKGTLVSGSQDATLSCW-DLNAYNESDSASVLKV 228
Query: 57 G----NGPVTSLCFKSGNEDIIY-VSSGKEVKSFDVHMP-ASWRPLESYNYNKEEINQIV 110
V+ + F ++D++ VS + + D+ P AS +P S + + I+ +
Sbjct: 229 HISSHEKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVA 288
Query: 111 CNPKSSFL--ACADDGGDVKIIDIRQHCLYKSLRA--GHSSICSSVQFIPWKPWEVISGG 166
NP + F+ C+ D + + D+R L + L GH I + + F P + + S
Sbjct: 289 FNPHNDFILATCSTDK-TIALWDLRN--LNQRLHTLEGHEDIVTKISFSPHEEPILASTS 345
Query: 167 LDSKLVMWDFSK-G--RPNKIVNFGLPE 191
D + ++WD S+ G +P + G PE
Sbjct: 346 ADRRTLVWDLSRIGEDQPAEEAQDGPPE 373
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 102 (41.0 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 35/148 (23%), Positives = 61/148 (41%)
Query: 30 FVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHM 89
++A+ G + F + S + D + S+ + + Y++SG ++
Sbjct: 120 YIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGK---YLASGAIDGIINIFD 176
Query: 90 PASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSIC 149
A+ + L + + I + +P S L A D G +KI D+ QH +GH S
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV-QHANLAGTLSGHGSWV 235
Query: 150 SSVQFIPWKPWEVISGGLDSKLVMWDFS 177
SV F P +S D + +WD S
Sbjct: 236 LSVAFSP-DDTHFVSSSSDKSIKVWDTS 262
Score = 50 (22.7 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 301 FGERGKYLISGGNDKLVKVWDC 322
+ G ++S G+D+ + ++DC
Sbjct: 282 YNPTGSKIVSAGDDRAIHIYDC 303
>SGD|S000002535 [details] [associations]
symbol:MTC5 "Subunit of the SEA (Seh1-associated) complex"
species:4932 "Saccharomyces cerevisiae" [GO:0000329 "fungal-type
vacuole membrane" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005774 "vacuolar membrane" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IDA] [GO:0097042 "extrinsic to
fungal-type vacuolar membrane" evidence=IDA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005773 "vacuole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006575 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50908 SMART:SM00320 SMART:SM00591
SGD:S000002535 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319 EMBL:BK006938
EMBL:Z48179 GO:GO:0097042 GO:GO:0035859
GeneTree:ENSGT00650000093352 OMA:INPSGRD OrthoDB:EOG43BQX2
PIR:S51855 RefSeq:NP_010413.3 RefSeq:NP_010417.3
ProteinModelPortal:Q03897 SMR:Q03897 DIP:DIP-1825N IntAct:Q03897
MINT:MINT-402415 STRING:Q03897 PaxDb:Q03897 PeptideAtlas:Q03897
EnsemblFungi:YDR128W GeneID:851706 GeneID:851710 KEGG:sce:YDR128W
KEGG:sce:YDR132C CYGD:YDR128w NextBio:969389 Genevestigator:Q03897
GermOnline:YDR128W Uniprot:Q03897
Length = 1148
Score = 120 (47.3 bits), Expect = 0.00082, P = 0.00082
Identities = 36/155 (23%), Positives = 69/155 (44%)
Query: 27 RPGFVASSGEDGCICWFDLRSKD--VQLVTDVGNGPVTSLCFKSGNEDIIYVSS-GKEVK 83
+P ++ S+ I W +S ++ V + +T + F + D++ S V
Sbjct: 81 KPYWIVSTSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVH 140
Query: 84 SFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRA 143
++D+ P RP S + + +Q+ N K + + G D+ + D+R+
Sbjct: 141 AWDMRSPH--RPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLK 198
Query: 144 GHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
GH S +S+ F +K E++S D + WD+SK
Sbjct: 199 GHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSK 233
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 113 (44.8 bits), Expect = 0.00082, P = 0.00082
Identities = 43/175 (24%), Positives = 79/175 (45%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGP-VTSLCFK 67
RR+ GH + S D F S DG + +DL + + VG+ V S+ F
Sbjct: 57 RRMTGHSHFVQDVVLSSDGQ-FALSGSWDGELRLWDLATGE-STRRFVGHTKDVLSVAFS 114
Query: 68 SGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGD- 126
+ N I+ S + +K ++ + E+ + KE ++ + +P + D
Sbjct: 115 TDNRQIVSASRDRTIKLWNTLGECKYTISEADGH-KEWVSCVRFSPNTLVPTIVSASWDK 173
Query: 127 -VKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
VK+ ++ Q+C ++ AGHS ++V P SGG D +++WD ++G+
Sbjct: 174 TVKVWNL-QNCKLRNTLAGHSGYLNTVAVSPDGSL-CASGGKDGVILLWDLAEGK 226
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 104 (41.7 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 41/179 (22%), Positives = 73/179 (40%)
Query: 9 RRLRGHKATATC-CIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNG-PVTSLCF 66
R + GH C I D F+ S + W DL + ++ T G+ V +
Sbjct: 133 RVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVW-DLATGKLK-TTLAGHVMTVRDVAV 190
Query: 67 KSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGD 126
+ + VS K VK +D+ + + Y + + + +P +A A
Sbjct: 191 SDRHPYLFSVSEDKTVKCWDLEKN---QIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSV 247
Query: 127 VKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIV 185
+K+ D+R +L GH + VQ P P +V+S D+ + +WD G+ K++
Sbjct: 248 IKLWDMRTRIPVITL-VGHKGPINQVQCTPVDP-QVVSSSTDATVRLWDVVAGKTMKVL 304
Score = 53 (23.7 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 296 VAFSMFGERGKYLISGGNDKLVKVW 320
V S F + G LI+G DK +K+W
Sbjct: 402 VLCSTFDKTGLRLITGEADKSIKIW 426
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 113 (44.8 bits), Expect = 0.00096, P = 0.00096
Identities = 43/201 (21%), Positives = 81/201 (40%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKS 68
+R+R H C +R P VAS +D FD RSK + PVTS+CF
Sbjct: 141 KRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSKGSTHLFQ-HKYPVTSVCFSD 199
Query: 69 GNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVK 128
++ +I ++ +D+ PL + +++ I + ++L K
Sbjct: 200 ASDQLITGGIDNVIRVWDIRNQED--PLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCK 257
Query: 129 IIDIRQHCL----YKSLRAGHSSICSSVQFIPWK--PWEVISGGLDSKLVMWDFSKGRPN 182
I DIR + K+ ++ ++ W + G D ++ +WD +
Sbjct: 258 IWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCGSSDRQVYIWDTN----T 313
Query: 183 KIVNFGLPENNGNAGQC-YNP 202
K + + LP ++G + ++P
Sbjct: 314 KQLQYCLPGHSGTVNEVTFHP 334
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 95 (38.5 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 41/171 (23%), Positives = 75/171 (43%)
Query: 11 LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVG-NGPVTSLCFKSG 69
L GH S DR ++ SS EDG + + L++ LV G N PV F
Sbjct: 299 LYGHSGPVYGASFSPDR-NYLLSSSEDGTVRLWSLQTFTC-LVGYKGHNYPVWDTQFSPY 356
Query: 70 NEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKI 129
+VS G + + + ++PL + + ++N +P S+++A V++
Sbjct: 357 G--YYFVSGGHD-RVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 413
Query: 130 IDIRQ-HCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
D+ +C+ + GH S+ F P + + +G D ++++WD G
Sbjct: 414 WDVLNGNCV--RIFTGHKGPIHSLTFSPNGRF-LATGATDGRVLLWDIGHG 461
Score = 64 (27.6 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 288 GHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSR-FQGVQT 330
GHT + FS GE L SG D V++WD + F+ ++T
Sbjct: 469 GHTDTVCSLRFSRDGE---ILASGSMDNTVRLWDAVKAFEDLET 509
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 109 (43.4 bits), Expect = 0.0010, Sum P(2) = 0.00099
Identities = 46/184 (25%), Positives = 80/184 (43%)
Query: 5 EAKPR-RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRS--KDVQLVTD----VG 57
E P RLRGH+ + + G + S+ +D IC +D+ + K+ ++V G
Sbjct: 166 ECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTG 225
Query: 58 NGPVTS-LCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKS 115
+ V + + +E + V+ +++ +D + +P S + + E+N + NP S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 116 SF-LACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMW 174
F LA V + D+R L H VQ+ P + S G D +L +W
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Query: 175 DFSK 178
D SK
Sbjct: 346 DLSK 349
Score = 46 (21.3 bits), Expect = 0.0010, Sum P(2) = 0.00099
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 308 LISGGNDKLVKVWDCSR 324
L S G D+ + VWD S+
Sbjct: 333 LASSGTDRRLNVWDLSK 349
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 109 (43.4 bits), Expect = 0.0010, Sum P(2) = 0.00099
Identities = 46/184 (25%), Positives = 80/184 (43%)
Query: 5 EAKPR-RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRS--KDVQLVTD----VG 57
E P RLRGH+ + + G + S+ +D IC +D+ + K+ ++V G
Sbjct: 166 ECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTG 225
Query: 58 NGPVTS-LCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKS 115
+ V + + +E + V+ +++ +D + +P S + + E+N + NP S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 116 SF-LACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMW 174
F LA V + D+R L H VQ+ P + S G D +L +W
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Query: 175 DFSK 178
D SK
Sbjct: 346 DLSK 349
Score = 46 (21.3 bits), Expect = 0.0010, Sum P(2) = 0.00099
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 308 LISGGNDKLVKVWDCSR 324
L S G D+ + VWD S+
Sbjct: 333 LASSGTDRRLNVWDLSK 349
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 109 (43.4 bits), Expect = 0.0010, Sum P(2) = 0.00099
Identities = 46/184 (25%), Positives = 80/184 (43%)
Query: 5 EAKPR-RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRS--KDVQLVTD----VG 57
E P RLRGH+ + + G + S+ +D IC +D+ + K+ ++V G
Sbjct: 166 ECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTG 225
Query: 58 NGPVTS-LCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKS 115
+ V + + +E + V+ +++ +D + +P S + + E+N + NP S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 116 SF-LACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMW 174
F LA V + D+R L H VQ+ P + S G D +L +W
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Query: 175 DFSK 178
D SK
Sbjct: 346 DLSK 349
Score = 46 (21.3 bits), Expect = 0.0010, Sum P(2) = 0.00099
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 308 LISGGNDKLVKVWDCSR 324
L S G D+ + VWD S+
Sbjct: 333 LASSGTDRRLNVWDLSK 349
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 109 (43.4 bits), Expect = 0.0010, Sum P(2) = 0.00099
Identities = 46/184 (25%), Positives = 80/184 (43%)
Query: 5 EAKPR-RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRS--KDVQLVTD----VG 57
E P RLRGH+ + + G + S+ +D IC +D+ + K+ ++V G
Sbjct: 166 ECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTG 225
Query: 58 NGPVTS-LCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKS 115
+ V + + +E + V+ +++ +D + +P S + + E+N + NP S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 116 SF-LACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMW 174
F LA V + D+R L H VQ+ P + S G D +L +W
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Query: 175 DFSK 178
D SK
Sbjct: 346 DLSK 349
Score = 46 (21.3 bits), Expect = 0.0010, Sum P(2) = 0.00099
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 308 LISGGNDKLVKVWDCSR 324
L S G D+ + VWD S+
Sbjct: 333 LASSGTDRRLNVWDLSK 349
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 109 (43.4 bits), Expect = 0.0010, Sum P(2) = 0.00099
Identities = 46/184 (25%), Positives = 80/184 (43%)
Query: 5 EAKPR-RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRS--KDVQLVTD----VG 57
E P RLRGH+ + + G + S+ +D IC +D+ + K+ ++V G
Sbjct: 166 ECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTG 225
Query: 58 NGPVTS-LCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKS 115
+ V + + +E + V+ +++ +D + +P S + + E+N + NP S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 116 SF-LACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMW 174
F LA V + D+R L H VQ+ P + S G D +L +W
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Query: 175 DFSK 178
D SK
Sbjct: 346 DLSK 349
Score = 46 (21.3 bits), Expect = 0.0010, Sum P(2) = 0.00099
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 308 LISGGNDKLVKVWDCSR 324
L S G D+ + VWD S+
Sbjct: 333 LASSGTDRRLNVWDLSK 349
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 109 (43.4 bits), Expect = 0.0010, Sum P(2) = 0.00099
Identities = 46/184 (25%), Positives = 80/184 (43%)
Query: 5 EAKPR-RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRS--KDVQLVTD----VG 57
E P RLRGH+ + + G + S+ +D IC +D+ + K+ ++V G
Sbjct: 166 ECNPNLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTG 225
Query: 58 NGPVTS-LCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKS 115
+ V + + +E + V+ +++ +D + +P S + + E+N + NP S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 116 SF-LACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMW 174
F LA V + D+R L H VQ+ P + S G D +L +W
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Query: 175 DFSK 178
D SK
Sbjct: 346 DLSK 349
Score = 46 (21.3 bits), Expect = 0.0010, Sum P(2) = 0.00099
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 308 LISGGNDKLVKVWDCSR 324
L S G D+ + VWD S+
Sbjct: 333 LASSGTDRRLNVWDLSK 349
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 109 (43.4 bits), Expect = 0.0010, Sum P(2) = 0.00099
Identities = 46/184 (25%), Positives = 80/184 (43%)
Query: 5 EAKPR-RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRS--KDVQLVTD----VG 57
E P RLRGH+ + + G + S+ +D IC +D+ + K+ ++V G
Sbjct: 166 ECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTG 225
Query: 58 NGPVTS-LCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKS 115
+ V + + +E + V+ +++ +D + +P S + + E+N + NP S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 116 SF-LACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMW 174
F LA V + D+R L H VQ+ P + S G D +L +W
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Query: 175 DFSK 178
D SK
Sbjct: 346 DLSK 349
Score = 46 (21.3 bits), Expect = 0.0010, Sum P(2) = 0.00099
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 308 LISGGNDKLVKVWDCSR 324
L S G D+ + VWD S+
Sbjct: 333 LASSGTDRRLNVWDLSK 349
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 109 (43.4 bits), Expect = 0.0010, Sum P(2) = 0.00099
Identities = 46/184 (25%), Positives = 80/184 (43%)
Query: 5 EAKPR-RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRS--KDVQLVTD----VG 57
E P RLRGH+ + + G + S+ +D IC +D+ + K+ ++V G
Sbjct: 166 ECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTG 225
Query: 58 NGPVTS-LCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKS 115
+ V + + +E + V+ +++ +D + +P S + + E+N + NP S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 116 SF-LACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMW 174
F LA V + D+R L H VQ+ P + S G D +L +W
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Query: 175 DFSK 178
D SK
Sbjct: 346 DLSK 349
Score = 46 (21.3 bits), Expect = 0.0010, Sum P(2) = 0.00099
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 308 LISGGNDKLVKVWDCSR 324
L S G D+ + VWD S+
Sbjct: 333 LASSGTDRRLNVWDLSK 349
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 109 (43.4 bits), Expect = 0.0010, Sum P(2) = 0.00099
Identities = 46/184 (25%), Positives = 80/184 (43%)
Query: 5 EAKPR-RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRS--KDVQLVTD----VG 57
E P RLRGH+ + + G + S+ +D IC +D+ + K+ ++V G
Sbjct: 166 ECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTG 225
Query: 58 NGPVTS-LCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKS 115
+ V + + +E + V+ +++ +D + +P S + + E+N + NP S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 116 SF-LACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMW 174
F LA V + D+R L H VQ+ P + S G D +L +W
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Query: 175 DFSK 178
D SK
Sbjct: 346 DLSK 349
Score = 46 (21.3 bits), Expect = 0.0010, Sum P(2) = 0.00099
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 308 LISGGNDKLVKVWDCSR 324
L S G D+ + VWD S+
Sbjct: 333 LASSGTDRRLNVWDLSK 349
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 375 358 0.00081 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 110
No. of states in DFA: 620 (66 KB)
Total size of DFA: 259 KB (2137 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.40u 0.12s 30.52t Elapsed: 00:00:01
Total cpu time: 30.42u 0.12s 30.54t Elapsed: 00:00:01
Start: Fri May 10 20:36:08 2013 End: Fri May 10 20:36:09 2013
WARNINGS ISSUED: 1