BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017194
(375 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9DB94|WDR53_MOUSE WD repeat-containing protein 53 OS=Mus musculus GN=Wdr53 PE=2 SV=1
Length = 358
Score = 115 bits (287), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 163/400 (40%), Gaps = 90/400 (22%)
Query: 13 GHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNED 72
GH ++ C A++D G VAS GE G + + + + G VTS+ F +
Sbjct: 8 GHSSSILCLNANKD--GLVASGGEGGDLVAWGEDGTPLGHMQLEGADDVTSVLFSASCPT 65
Query: 73 IIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDI 132
+Y S G+ + DV L+ ++ N+EEIN + N S LA ADD G +KI+D+
Sbjct: 66 KLYASHGETISVLDVRSLKG--SLDHFHVNEEEINCLSLNETESLLASADDSGAIKILDL 123
Query: 133 RQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPEN 192
+ + +SL+ HS+ICSSV F P +P ++S GLD ++++W K RP I N E
Sbjct: 124 EKKKVTRSLKR-HSNICSSVAFRPQRPQSLVSCGLDMQVMLWSLQKARPVWITNLQEDET 182
Query: 193 N-----GNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSK 247
G+ NPA H++++ I DG V + +
Sbjct: 183 EETEGPQTPGRLLNPALAHSVSVASC------GNIFSCGAEDGKVRIFRVM--------- 227
Query: 248 STTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKY 307
G + + GHT S V F
Sbjct: 228 -----------------------------GVKCERELGFKGHTLGVSQVCFL---PESSL 255
Query: 308 LISGGNDKLVKVWDC-------------------------------SRFQGVQTSINNDL 336
L++GGND +++WD SR G + + +
Sbjct: 256 LLTGGNDGRIRLWDVSGKMEKLQKSPARHIHRKKAKRAACPTQGGNSRAPGAEDEGHAKI 315
Query: 337 LIK-NINLNKKVNWLCTTPTE-SENLVVCDTSKVVKVYSI 374
L K +I +KVNWL +T + +++++V D + V VY +
Sbjct: 316 LPKLDIEHGEKVNWLLSTKIKGNKSILVADQTSCVSVYPL 355
>sp|Q32KQ2|WDR53_BOVIN WD repeat-containing protein 53 OS=Bos taurus GN=WDR53 PE=2 SV=1
Length = 358
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 166/405 (40%), Gaps = 100/405 (24%)
Query: 13 GHKATATCCIASRDRPGFVASSGEDG-CICWFDLRSKDVQLVTDV---GNGPVTSLCFKS 68
GH + C AS++ G VAS E G + W +D L+ G VT++ F
Sbjct: 8 GHSSPILCLNASQE--GLVASGAEGGDLVVW----GEDGTLLGHTCFQGAEDVTNVLFSP 61
Query: 69 GNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVK 128
+Y S G+ + DV + PL+ ++ N+EEIN + N + LA ADD G +K
Sbjct: 62 SCPTKLYASHGETISILDVR--SLKEPLDDFHVNEEEINCLSLNETENLLASADDSGTIK 119
Query: 129 IIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFG 188
I+D+ + +SL+ HS+ICSSV F P +P ++S GLD ++++W+ K RP I N
Sbjct: 120 ILDLENKKISRSLKR-HSNICSSVAFRPQRPQSLVSCGLDMQVMLWNLRKARPLWITNLQ 178
Query: 189 LPENN-----GNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNI 243
E + GQ NPA H++++ + DG V + +
Sbjct: 179 EDETEEMESPQSPGQLLNPALAHSVSVASC------GNVFSCGAEDGKVRIFRVM----- 227
Query: 244 SRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGE 303
G + + GH+ S V F
Sbjct: 228 ---------------------------------GVKCEQELGFKGHSLGVSQVCFL---- 250
Query: 304 RGKY-LISGGNDKLVKVWDCS--------------------------RFQGVQTSINND- 335
R Y L++GGND +K+WD S + G S+ +
Sbjct: 251 RESYLLLTGGNDGKIKLWDVSSEIEKKHKSPTKHTHRKKTKRAAYTKQGGGTHASVTGED 310
Query: 336 ----LLIK-NINLNKKVNWLCTTPTES-ENLVVCDTSKVVKVYSI 374
+L K +I +KVNWL +T + N++V D + + VY +
Sbjct: 311 EHGKILPKLSIEHGEKVNWLLSTKIKGYRNILVADQTSCISVYPL 355
>sp|Q7Z5U6|WDR53_HUMAN WD repeat-containing protein 53 OS=Homo sapiens GN=WDR53 PE=2 SV=1
Length = 358
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 160/402 (39%), Gaps = 92/402 (22%)
Query: 13 GHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNED 72
GH + C AS++ G +AS E G + + + G VTS+ F
Sbjct: 8 GHSSPVLCLNASKE--GLLASGAEGGDLTAWGEDGTPLGHTRFQGADDVTSVLFSPSCPT 65
Query: 73 IIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDI 132
+Y S G+ + DV L+ ++ N+EEIN + N + LA ADD G +KI+D+
Sbjct: 66 KLYASHGETISVLDVRSLKD--SLDHFHVNEEEINCLSLNQTENLLASADDSGAIKILDL 123
Query: 133 RQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPEN 192
+ +SL+ HS+ICSSV F P +P ++S GLD ++++W K RP I N E
Sbjct: 124 ENKKVIRSLKR-HSNICSSVAFRPQRPQSLVSCGLDMQVMLWSLQKARPLWITNLQEDET 182
Query: 193 N-----GNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSK 247
+ GQ NPA H+I++ I DG V + +
Sbjct: 183 EEMEGPQSPGQLLNPALAHSISVASC------GNIFSCGAEDGKVRIFRVM--------- 227
Query: 248 STTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKY 307
G + + GHT+ S V F
Sbjct: 228 -----------------------------GVKCEQELGFKGHTSGVSQVCFL---PESYL 255
Query: 308 LISGGNDKLVKVWD-------------------------CSRFQGVQTSIN--------N 334
L++GGND + +WD C++ QG T+ + N
Sbjct: 256 LLTGGNDGKITLWDANSEVEKKQKSPTKRTHRKKPKRGTCTK-QGGNTNASVTDEEEHGN 314
Query: 335 DLLIKNINLNKKVNWLCTTPTES-ENLVVCDTSKVVKVYSIS 375
L NI +KVNWL T + +N++V D + + VY ++
Sbjct: 315 ILPKLNIEHGEKVNWLLGTKIKGHQNILVADQTSCISVYPLN 356
>sp|Q54BI5|WDR53_DICDI WD repeat-containing protein 53 homolog OS=Dictyostelium discoideum
GN=wdr53 PE=3 SV=1
Length = 368
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 170/392 (43%), Gaps = 75/392 (19%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRS-KDVQLVTDVGNG-PVTSLCFK 67
+L GHK T CI+S ++ +AS +D + +DL + K +Q + + G PV ++CF
Sbjct: 24 KLIGHKDTV-LCISSHNKKEIIASGSDDCTVRIWDLNTNKSIQSIVEGFQGNPVNNVCF- 81
Query: 68 SGNEDIIYVSSGKEVKSFDVHMP-ASWRPLES-YNYNKEEINQIVCNPKSSFLACADDGG 125
+ +Y S + SFD+ P + + Y +N EEINQ+ + K +LA DD G
Sbjct: 82 -DQDFTLYCSYDNIIVSFDLRQPNVILKEFNTQYKFNTEEINQLSFDSKYQYLAACDDSG 140
Query: 126 DVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIV 185
KIID+ ++ L +SL H++I + F P E+I+ +D ++ WDF K +
Sbjct: 141 QTKIIDVTKNKLVESLNKKHTNIATGCVFRPNSKNELITSSMDFSIIHWDFLKAKVLHRD 200
Query: 186 NF---GLPENNGNA----------GQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVV 232
F LP+N + + NP FV ++ + +K ++ GDG +
Sbjct: 201 TFKEGSLPQNISKSQQQQQETTEPNRMLNPPFVTSVDCSN------NSKYVAISMGDGTI 254
Query: 233 DVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAA 292
VIN + + K+N H ++
Sbjct: 255 -VIN---------------EISSFKQYLKIN-----------------------SIHKSS 275
Query: 293 ASCVAFSMFGERG-KYLISGGN-DKLVKVWDCSRFQGVQTSI--------NNDLLIKNIN 342
V + + E + LIS GN DK + +WD S + S NN+ + +
Sbjct: 276 IQQVHYPKYLENNYQRLISFGNYDKKIVIWDVSEDMNTKVSSSLLSNDEKNNERIKTWLE 335
Query: 343 LNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 374
++K+N L T+ ++ + V D S +K+ SI
Sbjct: 336 HSEKINCLTTSNLKNNAIFVADLSNDLKLLSI 367
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 36/225 (16%)
Query: 106 INQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISG 165
+N + + LA D V++ DI K+ + GH+S SV F P + SG
Sbjct: 909 VNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFK-GHTSRVRSVVFSP-NSLMLASG 966
Query: 166 GLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVV 225
D + +WD S G I G+ G Y+ AF D ML
Sbjct: 967 SSDQTVRLWDISSGECLYIFQ-------GHTGWVYSVAFN-----LDGSML-------AT 1007
Query: 226 AKGDGVVDVINIES-------ELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGK 278
GD V + +I S + + S +S G+ S + D + + D S G
Sbjct: 1008 GSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSD--DQTVRLWDISSGN 1065
Query: 279 RLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCS 323
L Y++ GHT SCV +F G L SGG+D++V++WD S
Sbjct: 1066 CL---YTLQGHT---SCVRSVVFSPDGAMLASGGDDQIVRLWDIS 1104
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 131/322 (40%), Gaps = 30/322 (9%)
Query: 11 LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGN 70
L+GH + + + D + S + W ++ S V S+ F
Sbjct: 1196 LQGHTSWVNSVVFNPDGSTLASGSSDQTVRLW-EINSSKCLCTFQGHTSWVNSVVFNPDG 1254
Query: 71 EDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKII 130
+ SS K V+ +D+ +S + L ++ + +N + NP S LA V++
Sbjct: 1255 SMLASGSSDKTVRLWDI---SSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLW 1311
Query: 131 DI-RQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGL 189
+I CL+ GH+S SSV F P + SG D + +W S G + F L
Sbjct: 1312 EISSSKCLHTF--QGHTSWVSSVTFSP-DGTMLASGSDDQTVRLWSISSGEC--LYTF-L 1365
Query: 190 PENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESEL-NISRSKS 248
N ++P AI + D+T ++ ++ G + + + + +I S
Sbjct: 1366 GHTNWVGSVIFSPDG----AILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPD 1421
Query: 249 TTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYL 308
T GS D + + + S G+ L Y++ GH + VAFS G L
Sbjct: 1422 GTLLASGSD--------DQTVRLWNISSGECL---YTLHGHINSVRSVAFS---SDGLIL 1467
Query: 309 ISGGNDKLVKVWDCSRFQGVQT 330
SG +D+ +K+WD + ++T
Sbjct: 1468 ASGSDDETIKLWDVKTGECIKT 1489
Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 130/338 (38%), Gaps = 44/338 (13%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKS 68
+ +GH + + S + +AS D + +D+ S + + G V S+ F
Sbjct: 942 KTFKGHTSRVRSVVFSPNSL-MLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNL 1000
Query: 69 GNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVK 128
+ S + V+ +D+ +S + + + + +V + + LA D V+
Sbjct: 1001 DGSMLATGSGDQTVRLWDI---SSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVR 1057
Query: 129 IIDIRQ-HCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNF 187
+ DI +CLY GH+S SV F P + SGG D + +WD S G
Sbjct: 1058 LWDISSGNCLYT--LQGHTSCVRSVVFSP-DGAMLASGGDDQIVRLWDISSG-------- 1106
Query: 188 GLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSK 247
N Q Y + P+ L D +V + +I S+ + +
Sbjct: 1107 ----NCLYTLQGYTSWVRFLVFSPNGVTLAN-------GSSDQIVRLWDISSKKCLYTLQ 1155
Query: 248 STTK-----PLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFG 302
T +T D + + D S K L Y + GHT+ + V +F
Sbjct: 1156 GHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCL---YILQGHTSWVNSV---VFN 1209
Query: 303 ERGKYLISGGNDKLVKVWDCS------RFQGVQTSINN 334
G L SG +D+ V++W+ + FQG + +N+
Sbjct: 1210 PDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNS 1247
>sp|P0CS35|ERB1_CRYNB Ribosome biogenesis protein ERB1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=ERB1 PE=3 SV=1
Length = 830
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 17/160 (10%)
Query: 27 RPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFD 86
+P F A++ I +DL ++ + G ++S+ SG +++I S K++ FD
Sbjct: 674 KPHFFAATQR--YIRLYDLAAQKLIRTLQSGVKWISSMDVHSGGDNLIIGSYDKKLAWFD 731
Query: 87 VHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKII------DIRQHCLYKS 140
+ + A +P ++ Y+ + + +P A A D G V I D+ Q+ L
Sbjct: 732 MDLSA--KPYKTLRYHNRALRSVAYHPTLPLFASASDDGTVHIFHCTVYTDLMQNPLIVP 789
Query: 141 LR--AGHSSI----CSSVQFIPWKPWEVISGGLDSKLVMW 174
L+ GH I ++++P KPW ++S G D ++ +W
Sbjct: 790 LKILRGHKVIDGIGVLDLRWVPGKPW-LVSSGADGEVRLW 828
>sp|P0CS34|ERB1_CRYNJ Ribosome biogenesis protein ERB1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=ERB1 PE=3 SV=1
Length = 830
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 17/160 (10%)
Query: 27 RPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFD 86
+P F A++ I +DL ++ + G ++S+ SG +++I S K++ FD
Sbjct: 674 KPHFFAATQR--YIRLYDLAAQKLIRTLQSGVKWISSMDVHSGGDNLIIGSYDKKLAWFD 731
Query: 87 VHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKII------DIRQHCLYKS 140
+ + A +P ++ Y+ + + +P A A D G V I D+ Q+ L
Sbjct: 732 MDLSA--KPYKTLRYHNRALRSVAYHPTLPLFASASDDGTVHIFHCTVYTDLMQNPLIVP 789
Query: 141 LR--AGHSSI----CSSVQFIPWKPWEVISGGLDSKLVMW 174
L+ GH I ++++P KPW ++S G D ++ +W
Sbjct: 790 LKILRGHKVIDGIGVLDLRWVPGKPW-LVSSGADGEVRLW 828
>sp|Q10281|GBLP_SCHPO Guanine nucleotide-binding protein subunit beta-like protein
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rkp1 PE=1 SV=3
Length = 314
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 108/244 (44%), Gaps = 19/244 (7%)
Query: 134 QHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPEN- 192
+ + ++ GHS +S+ P P ++SG D +++W+ + VN+G+ +
Sbjct: 3 EQLVLRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDD----VNYGVAQRR 58
Query: 193 -NGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESE-LNISRSKSTT 250
G++ + A + DKT ++ + KG+ + S+ L++S S
Sbjct: 59 LTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNR 118
Query: 251 KPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLIS 310
+ + GS RD ++I + G + + + GGH+ SCV FS + + +S
Sbjct: 119 QVVSGS--------RDKTIKIWNIIGNCKYTI--TDGGHSDWVSCVRFSPNPDNLTF-VS 167
Query: 311 GGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVK 370
G DK VKVWD F + + + + ++ + LC + L++ D ++
Sbjct: 168 AGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGS-LCASGGRDGTLMLWDLNESTH 226
Query: 371 VYSI 374
+YS+
Sbjct: 227 LYSL 230
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 127/347 (36%), Gaps = 76/347 (21%)
Query: 11 LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTD----VGNGPVTSLCF 66
L GH T + + P + S D I ++L DV G+ S C
Sbjct: 11 LEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDC- 69
Query: 67 KSGNEDIIYVSSGKEVKSFDVH--MPASW-RPLESYNYNKEE-----------INQIVCN 112
SFD H + ASW + + ++ K E + + +
Sbjct: 70 ---------------ALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSIS 114
Query: 113 PKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKP--WEVISGGLDSK 170
P + + +KI +I +C Y GHS S V+F P P +S G D
Sbjct: 115 PDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSP-NPDNLTFVSAGWDKA 173
Query: 171 LVMWDFSKGRPNKIVNFGLPENN-GNAGQCYNPAFVHAIAI-PDADMLDKTNKICVVAKG 228
+ +WD F L ++ G+ G +V A+ I PD + C
Sbjct: 174 VKVWDLE--------TFSLRTSHYGHTG------YVSAVTISPDGSL-------CASGGR 212
Query: 229 DGVVDV--INIESELNISRSKSTTKPLKGS--------QSTSKVNIRDAEMEILDQSGGK 278
DG + + +N + L +K+ L S + S + I D E Q
Sbjct: 213 DGTLMLWDLNESTHLYSLEAKANINALVFSPNRYWLCAATGSSIRIFDLET----QEKVD 268
Query: 279 RLHLDY-SVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSR 324
L +D+ VG ++ C++ + + G+ L SG D L++VW ++
Sbjct: 269 ELTVDFVGVGKKSSEPECISLT-WSPDGQTLFSGWTDNLIRVWQVTK 314
>sp|Q6FJZ9|PRP46_CANGA Pre-mRNA-splicing factor PRP46 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=PRP46 PE=3 SV=1
Length = 427
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 125/323 (38%), Gaps = 40/323 (12%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKS 68
R + GH C + + A+ D I ++L S +++ + V L +
Sbjct: 109 RVIHGHHGWVRCIAMDKVDNEWFATGSNDKTIKIWNLASGKLKVTLKAHDMTVRDLAISN 168
Query: 69 GNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVK 128
+ + VS K VK +D+ + + +Y+ + ++ + +P + A VK
Sbjct: 169 RHPYMFSVSEDKTVKCWDLEKNTA---IRNYHGHLSGVHTVDIHPTVDVVVTAGRDSVVK 225
Query: 129 IIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFG 188
+ DIR +L GH + V+ +P P +VIS +D+ + +WD G+ K++
Sbjct: 226 VWDIRTRLPVMTL-PGHKGPITKVRCLPVDP-QVISSSVDASIRLWDLVAGKSMKVLTHH 283
Query: 189 L---------PENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIES 239
P A C N + + +P ++L TN V++ V++ ++I
Sbjct: 284 QRTVRDISVHPSEFSFASACTND--IRSWLLPKGELL--TN---FVSQDLDVINTVSINQ 336
Query: 240 ELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHL--DYSVGGHTAAASCVA 297
+ + GS + S + D G + G + +
Sbjct: 337 DDVL---------FAGSDNGS--------LTFFDYKSGHKYQTFKTKEAPGSPESERGIL 379
Query: 298 FSMFGERGKYLISGGNDKLVKVW 320
S F G L++G D+ +K+W
Sbjct: 380 SSTFDGTGLRLLTGETDRTIKIW 402
>sp|Q3Y8L7|WDR69_CHLRE Outer row dynein assembly protein 16 OS=Chlamydomonas reinhardtii
GN=ODA16 PE=1 SV=1
Length = 446
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 133/324 (41%), Gaps = 35/324 (10%)
Query: 11 LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGN 70
LR H T C ++ F+ S + C W ++V + N V ++ F +
Sbjct: 90 LRAHILPLTNCAFNKSGDRFITGSYDRTCKVWNTFTGEEVFTLEGHKN-VVYAIAFNNPY 148
Query: 71 ED-IIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVC---NPKSSFLACADDGGD 126
D I+ S K K +D + + L+ + +IVC NP+S+ +A
Sbjct: 149 GDKIVTGSFDKTCKLWDAYTGQLYYTLKGHQ------TEIVCLSFNPQSTIIATGSMDNT 202
Query: 127 VKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVN 186
K+ D+ +L AGH + S+ F +++G D +WD G+ +++
Sbjct: 203 AKLWDVETGQERATL-AGHRAEIVSLGFNTGGDL-IVTGSFDHDSRLWDVRTGQCVHVLS 260
Query: 187 FGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGV-VDVINIESELNISR 245
G+ G+ + F +A + + +D T+++ V G + V + + L+++
Sbjct: 261 -------GHRGEVSSTQFNYAGTLVVSGSIDCTSRLWDVRSGRCLSVKQGHTDEVLDVAF 313
Query: 246 SKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERG 305
+ TK + S D + G H ++ GH S VAF+ G R
Sbjct: 314 DAAGTKMVSASA--------DGSARLYHTLTGVCQH---TLVGHEGEISKVAFNPQGTR- 361
Query: 306 KYLISGGNDKLVKVWDCSRFQGVQ 329
LI+ +DK ++WDC + +Q
Sbjct: 362 --LITASSDKTCRLWDCDTGECLQ 383
>sp|Q8N136|WDR69_HUMAN Outer row dynein assembly protein 16 homolog OS=Homo sapiens
GN=WDR69 PE=1 SV=1
Length = 415
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 25/234 (10%)
Query: 99 YNYNKEEINQIVC---NPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFI 155
Y+ + +IVC NP+S+ +A K+ DI+ +LR GHS+ S+ F
Sbjct: 170 YHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLR-GHSAEIISLSFN 228
Query: 156 PWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADM 215
+I+G D +V+WD GR I+ G+ + + +F ++
Sbjct: 229 TSGD-RIITGSFDHTVVVWDADTGRKVNILI-------GHCAEISSASFNWDCSLILTGS 280
Query: 216 LDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQS 275
+DKT K+ G V + + E+ S T K + + + D I +
Sbjct: 281 MDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASA-------DGTARIFSAA 333
Query: 276 GGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQ 329
K + + GH S ++F+ +G +L++G +DK ++WD Q +Q
Sbjct: 334 TRKCI---AKLEGHEGEISKISFN---PQGNHLLTGSSDKTARIWDAQTGQCLQ 381
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 124/326 (38%), Gaps = 38/326 (11%)
Query: 11 LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGN 70
L GH ++ S D + SG+ W D S + G V S+ F
Sbjct: 963 LEGHGSSVLSVAFSPDGQRVASGSGDKTIKIW-DTASGTCTQTLEGHGGSVWSVAFSPDG 1021
Query: 71 EDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKII 130
+ + S K +K +D + LE + + +V +P +A D +KI
Sbjct: 1022 QRVASGSDDKTIKIWDTASGTCTQTLEGHG---GWVQSVVFSPDGQRVASGSDDHTIKIW 1078
Query: 131 DIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLP 190
D ++L GH SV F P V SG +D + +WD + G + +
Sbjct: 1079 DAVSGTCTQTLE-GHGDSVWSVAFSP-DGQRVASGSIDGTIKIWDAASGTCTQTLE---- 1132
Query: 191 ENNGNAGQCYNPAFVHAIAI-PDADM-----LDKTNKICVVAKGDGVVDVINIESELNIS 244
G+ G +VH++A PD +D T KI A G + E +
Sbjct: 1133 ---GHGG------WVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTL-----EGHGG 1178
Query: 245 RSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGER 304
+S G + S + D ++I D + G ++ GH VAFS G+R
Sbjct: 1179 WVQSVAFSPDGQRVASGSS--DKTIKIWDTASGT---CTQTLEGHGGWVQSVAFSPDGQR 1233
Query: 305 GKYLISGGNDKLVKVWDCSRFQGVQT 330
+ SG +D +K+WD + QT
Sbjct: 1234 ---VASGSSDNTIKIWDTASGTCTQT 1256
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 125/325 (38%), Gaps = 36/325 (11%)
Query: 11 LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGN 70
L GH ++ S D VAS +D I +D S + G V S+ F
Sbjct: 837 LEGHGSSVLSVAFSADGQR-VASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDR 895
Query: 71 EDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKII 130
E V+SG + K+ + AS ++ + + + +P +A D +KI
Sbjct: 896 E---RVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIW 952
Query: 131 DIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLP 190
D ++L GH S SV F P V SG D + +WD + G + +
Sbjct: 953 DAASGTCTQTLE-GHGSSVLSVAFSP-DGQRVASGSGDKTIKIWDTASGTCTQTL----- 1005
Query: 191 ENNGNAGQCYNPAFVHAIAIPDADML-----DKTNKICVVAKGDGVVDVINIESELNISR 245
G+ G ++ AF PD + DKT KI A G + E +
Sbjct: 1006 --EGHGGSVWSVAFS-----PDGQRVASGSDDKTIKIWDTASGTCTQTL-----EGHGGW 1053
Query: 246 SKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERG 305
+S G + S + D ++I D G ++ GH + VAFS G+R
Sbjct: 1054 VQSVVFSPDGQRVASGSD--DHTIKIWDAVSGT---CTQTLEGHGDSVWSVAFSPDGQR- 1107
Query: 306 KYLISGGNDKLVKVWDCSRFQGVQT 330
+ SG D +K+WD + QT
Sbjct: 1108 --VASGSIDGTIKIWDAASGTCTQT 1130
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 60/158 (37%), Gaps = 5/158 (3%)
Query: 31 VASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMP 90
VAS DG I +D S + G V S+ F + + S +K +D
Sbjct: 1108 VASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASG 1167
Query: 91 ASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICS 150
+ LE + + + +P +A +KI D ++L GH
Sbjct: 1168 TCTQTLEGHG---GWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLE-GHGGWVQ 1223
Query: 151 SVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFG 188
SV F P V SG D+ + +WD + G + +N G
Sbjct: 1224 SVAFSP-DGQRVASGSSDNTIKIWDTASGTCTQTLNVG 1260
>sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2
SV=2
Length = 405
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 120/320 (37%), Gaps = 76/320 (23%)
Query: 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSL 64
+++ R GHK TC S +AS D + + K V V S+
Sbjct: 51 QSRAYRFTGHKDAVTCVNFS-PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Query: 65 CFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVC---NPKSSFLACA 121
F S + ++ S K VK + H R L S + IN + C +P + A
Sbjct: 110 HFCSDGQSLVTASDDKTVKVWSTHRQ---RFLFSLT---QHINWVRCAKFSPDGRLIVSA 163
Query: 122 DDGGDVKIID-IRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
D VK+ D + C++ H + V F P + + G+D+ + +WD R
Sbjct: 164 SDDKTVKLWDKTSRECIHSYCE--HGGFVTYVDFHPSGTC-IAAAGMDNTVKVWD---AR 217
Query: 181 PNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESE 240
++++ Q Y +H+ A+ N + G+ ++ +
Sbjct: 218 THRLL------------QHYQ---LHSAAV---------NALSFHPSGNYLITASS---- 249
Query: 241 LNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSM 300
D+ ++ILD G+ L Y++ GH A+ VAFS
Sbjct: 250 -------------------------DSTLKILDLMEGRLL---YTLHGHQGPATTVAFSR 281
Query: 301 FGERGKYLISGGNDKLVKVW 320
GE Y SGG+D+ V VW
Sbjct: 282 TGE---YFASGGSDEQVMVW 298
>sp|Q9C4Z6|GPLPB_ARATH Guanine nucleotide-binding protein subunit beta-like protein B
OS=Arabidopsis thaliana GN=RACK1B PE=2 SV=1
Length = 326
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 129/319 (40%), Gaps = 51/319 (15%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKS 68
RR+ GH + S D F S DG + +DL + + V S+ F +
Sbjct: 57 RRMTGHSHFVQDVVLSSDGQ-FALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFST 115
Query: 69 GNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGD-- 126
N I+ S + +K ++ + E+ + +KE ++ + +P + D
Sbjct: 116 DNRQIVSASRDRTIKLWNTLGECKYTISEA-DGHKEWVSCVRFSPNTLVPTIVSASWDKT 174
Query: 127 VKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVN 186
VK+ ++ Q+C ++ AGHS ++V P SGG D +++WD ++G+
Sbjct: 175 VKVWNL-QNCKLRNTLAGHSGYLNTVAVSP-DGSLCASGGKDGVILLWDLAEGKK----L 228
Query: 187 FGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRS 246
+ L + C++P N+ + A + + + ++E S
Sbjct: 229 YSLEAGSIIHSLCFSP-----------------NRYWLCAATENSIRIWDLE-------S 264
Query: 247 KSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGK 306
KS + L KV+++ AE E D S G +G T C + + + G
Sbjct: 265 KSVVEDL-------KVDLK-AEAEKTDGSTG--------IGNKTKVIYCTSLN-WSADGN 307
Query: 307 YLISGGNDKLVKVWDCSRF 325
L SG D +++VW R+
Sbjct: 308 TLFSGYTDGVIRVWGIGRY 326
>sp|A7S338|LIS1_NEMVE Lissencephaly-1 homolog OS=Nematostella vectensis GN=v1g242515 PE=3
SV=1
Length = 409
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 122/306 (39%), Gaps = 30/306 (9%)
Query: 60 PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLA 119
P+T + F ++ S VK +D R L+ + + + + + FLA
Sbjct: 108 PITKVLFHPVYSVMVTSSEDATVKVWDYETGDFERTLKGHT---DAVQDLAFDHTGKFLA 164
Query: 120 CADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179
+ +K+ D + ++L GH SS+ F+P ++S D + MW+ + G
Sbjct: 165 SSSADMTIKLWDFQGFECIRTLH-GHDHNVSSISFLPSGD-HLVSASRDKTIKMWEIATG 222
Query: 180 RPNKI-------VNFGLPENNGNA-GQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGV 231
K V P +G+ C N + + + C + D V
Sbjct: 223 YCVKTFQGHGEWVRRVRPNADGSLIASCSNDQTIRVWVVASRECK------CDLRDHDHV 276
Query: 232 VDVINI--ESELNISRSKSTTKPLKGSQSTSKVNI---RDAEMEILDQSGGKRLHLDYSV 286
++ +N ES + + + K + S + RD ++I D S G L ++
Sbjct: 277 IEDLNWAPESATPVINEAAGVEGGKKAMSPGPFLVSASRDKSIKIWDVSAGVCL---VTL 333
Query: 287 GGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKK 346
GH V MF GK+++S +DK +++WD + +T + ++ + ++ +K
Sbjct: 334 VGHDNWVRAV---MFHPGGKFIVSCSDDKTLRIWDYKNKRCAKTLVAHEHFVTTLDFHKS 390
Query: 347 VNWLCT 352
++ T
Sbjct: 391 APFVAT 396
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 140/340 (41%), Gaps = 50/340 (14%)
Query: 30 FVASSGEDGCI-CWFDLRSKDVQLVTDV-GNGPVTSLCFKSGNEDIIYVSSGKEVKSFDV 87
+A++G DG I W S+D L+ + GN + + F + I ++ K VK + V
Sbjct: 1377 IIATAGADGNIQLW---HSQDGSLLKTLPGNKAIYGISFTPQGDLIASANADKTVKIWRV 1433
Query: 88 HMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSS 147
+ + L ++ E+N++ +P LA A VK+ ++ K+L+ GH+
Sbjct: 1434 RDGKALKTLIGHD---NEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLK-GHTD 1489
Query: 148 ICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHA 207
V F P + S D + +WD G K LP +N V++
Sbjct: 1490 EVFWVSFSP-DGKIIASASADKTIRLWDSFSGNLIK----SLPAHND---------LVYS 1535
Query: 208 IAI-PDADML-----DKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSK 261
+ PD ML DKT K+ G ++ + S + S S S S S
Sbjct: 1536 VNFNPDGSMLASTSADKTVKLWRSHDGH-LLHTFSGHSNVVYSSSFSPDGRYIASAS--- 1591
Query: 262 VNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321
D ++I G HL ++ H A V ++F GK LISG D K+W
Sbjct: 1592 ---EDKTVKIWQIDG----HLLTTLPQHQAG---VMSAIFSPDGKTLISGSLDTTTKIW- 1640
Query: 322 CSRF--QGVQTSINNDLLIKNINLNKKVNWLCTTPTESEN 359
RF Q +TS N L++ N + ++L T P + N
Sbjct: 1641 --RFDSQQAKTSQMNTLVMSACNWLQ--DYLNTNPNVTPN 1676
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 146/386 (37%), Gaps = 73/386 (18%)
Query: 11 LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGP---VTSLCFK 67
L GH A S D A S + W +D +L+ + NG V SL F
Sbjct: 1193 LTGHSAGVITVRFSPDGQTIAAGSEDKTVKLW---HRQDGKLLKTL-NGHQDWVNSLSFS 1248
Query: 68 SGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDV 127
+ + S+ K +K + + + L+ +N + ++N + +A A +
Sbjct: 1249 PDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVN---FSSDGKAIASASRDNTI 1305
Query: 128 KIIDIRQHCLYKSLRAGHSSICSSVQFIP----------------WK-----PWEVISG- 165
K+ + +H + GHS +V F+P W+ P EV++G
Sbjct: 1306 KLWN--RHGIELETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLWQRPLISPLEVLAGN 1363
Query: 166 ------------------GLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHA 207
G D + +W G K LP N G + P
Sbjct: 1364 SGVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKT----LPGNKAIYGISFTPQG-DL 1418
Query: 208 IAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDA 267
IA +AD KT KI V G + +I ++E+N K L + RD
Sbjct: 1419 IASANAD---KTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASAS-------RDN 1468
Query: 268 EMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQG 327
+++ + S GK ++ GHT V+FS GK + S DK +++WD
Sbjct: 1469 TVKLWNVSDGK---FKKTLKGHTDEVFWVSFS---PDGKIIASASADKTIRLWDSFSGNL 1522
Query: 328 VQTSINNDLLIKNINLNKKVNWLCTT 353
+++ ++ L+ ++N N + L +T
Sbjct: 1523 IKSLPAHNDLVYSVNFNPDGSMLAST 1548
Score = 35.8 bits (81), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 43/220 (19%)
Query: 162 VISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADML----- 216
+ SG LD + +W GR + +N G+ Y+ +F PD +
Sbjct: 1087 IASGSLDKTIKLWS-RDGRLFRTLN-------GHEDAVYSVSFS-----PDGQTIASGGS 1133
Query: 217 DKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSG 276
DKT K+ + G + + E +N K L + S D +++ D +
Sbjct: 1134 DKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASS-------DHSIKLWDTTS 1186
Query: 277 GKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDL 336
G+ L ++ GH+A V FS G+ + +G DK VK+W +
Sbjct: 1187 GQLL---MTLTGHSAGVITVRFS---PDGQTIAAGSEDKTVKLWHR----------QDGK 1230
Query: 337 LIKNINLNKK-VNWLCTTPTESENLVVCDTSKVVKVYSIS 375
L+K +N ++ VN L +P + + L K +K++ I+
Sbjct: 1231 LLKTLNGHQDWVNSLSFSP-DGKTLASASADKTIKLWRIA 1269
>sp|Q24572|CAF1_DROME Probable histone-binding protein Caf1 OS=Drosophila melanogaster
GN=Caf1 PE=1 SV=1
Length = 430
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 9/178 (5%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDL-------RSKDVQLVTDVGNGPVT 62
RLRGH+ + + G++ S+ +D IC +D+ R D + + V
Sbjct: 176 RLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVE 235
Query: 63 SLCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF-LAC 120
+ + +E + V+ +++ +D + +P + + + E+N + NP S F LA
Sbjct: 236 DVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILAT 295
Query: 121 ADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
V + D+R L H VQ+ P + S G D +L +WD SK
Sbjct: 296 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353
Score = 33.1 bits (74), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325
D ++ I D ++V HTA +C++F+ + E L +G DK V +WD
Sbjct: 253 DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEF--ILATGSADKTVALWDLRNL 310
Query: 326 Q 326
+
Sbjct: 311 K 311
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 116/320 (36%), Gaps = 76/320 (23%)
Query: 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSL 64
+ + R GHK TC S +AS D + + K V V S+
Sbjct: 51 QTRAYRFAGHKDAVTCVNFS-PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Query: 65 CFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVC---NPKSSFLACA 121
F S + + S K VK + H L + IN + C +P + A
Sbjct: 110 HFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLS------QHINWVRCAKFSPDGRLIVSA 163
Query: 122 DDGGDVKIID-IRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
D VK+ D + C++ H + V F P + + G+D+ + +WD R
Sbjct: 164 SDDKTVKLWDKTSRECVHSYCE--HGGFVTYVDFHPSGTC-IAAAGMDNTVKVWDV---R 217
Query: 181 PNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESE 240
++++ Q Y +H+ A+ N + G+ +V +
Sbjct: 218 THRLL------------QHYQ---LHSAAV---------NALSFHPSGNYLVTASS---- 249
Query: 241 LNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSM 300
D+ ++ILD G+ L Y++ GH A+ VAFS
Sbjct: 250 -------------------------DSTLKILDLMEGRLL---YTLHGHQGPATTVAFSR 281
Query: 301 FGERGKYLISGGNDKLVKVW 320
GE Y SGG+D+ V VW
Sbjct: 282 TGE---YFASGGSDEQVMVW 298
>sp|O22467|MSI1_ARATH Histone-binding protein MSI1 OS=Arabidopsis thaliana GN=MSI1 PE=1
SV=1
Length = 424
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDL------RSKDVQLVTDVGNGPVTS 63
+LRGH + S+ + G + S +D IC +D+ +S D Q + G V
Sbjct: 173 KLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVED 232
Query: 64 LCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF-LACA 121
+ + +E + V + + +D+ P++ +P++S + E+N + NP + + +A
Sbjct: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATG 292
Query: 122 DDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
VK+ D+R+ H V + P + S L +L++WD S+
Sbjct: 293 STDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
Score = 38.5 bits (88), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 26/170 (15%)
Query: 30 FVASSGEDGCICWFDLRS----KDVQLVTDVGNGPVTSLCFKSGNEDIIYV-SSGKEVKS 84
S G+D + +DLRS K VQ V + V L F NE ++ S+ K VK
Sbjct: 242 LFGSVGDDQYLLIWDLRSPSASKPVQSVV-AHSMEVNCLAFNPFNEWVVATGSTDKTVKL 300
Query: 85 FDVHMPASWRPLESYNYNKEEINQIVCNPKS-SFLACADDGGDVKIIDIRQ--------- 134
FD+ ++ L +++ +KEE+ Q+ NPK+ + LA G + + D+ +
Sbjct: 301 FDLRKLST--ALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVED 358
Query: 135 ------HCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
L+ + GH+S S + P + W + S D+ L +W ++
Sbjct: 359 AEDGPPELLF--IHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAE 406
>sp|Q8NBT0|POC1A_HUMAN POC1 centriolar protein homolog A OS=Homo sapiens GN=POC1A PE=1
SV=2
Length = 407
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 122/319 (38%), Gaps = 40/319 (12%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKS 68
R +GH+ TC S + +AS D C+ + ++ + VT + F
Sbjct: 13 RHFKGHRDAVTCVDFSINTKQ-LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 69 GNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQI-VCNPKSSFLACADDGGDV 127
++SG K+ + +P + + + + C+ SF+ +DD V
Sbjct: 72 SGH---LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK-TV 127
Query: 128 KIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNF 187
K+ + SL + H + +F P ++S D + +WD S
Sbjct: 128 KVWATHRQKFLFSL-SQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKS---------- 175
Query: 188 GLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKG-DGVVDVINIESELNISRS 246
+ +C + H + D + C+ A G D V V ++ + +
Sbjct: 176 --------SRECVHSYCEHGGFVTYVDF--HPSGTCIAAAGMDNTVKVWDVRTHRLLQHY 225
Query: 247 KSTTKPLKGSQSTSKVNI-----RDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMF 301
+ + + G N D+ ++ILD G+ L Y++ GH A+ VAFS
Sbjct: 226 QLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLL---YTLHGHQGPATTVAFSRT 282
Query: 302 GERGKYLISGGNDKLVKVW 320
GE Y SGG+D+ V VW
Sbjct: 283 GE---YFASGGSDEQVMVW 298
>sp|Q03897|WDR59_YEAST Maintenance of telomere capping protein 5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MTC5 PE=1
SV=1
Length = 1148
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Query: 27 RPGFVASSGEDGCICWFDLRSKD--VQLVTDVGNGPVTSLCFKSGNEDIIYV-SSGKEVK 83
+P ++ S+ I W +S ++ V + +T + F + D++ S V
Sbjct: 81 KPYWIVSTSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVH 140
Query: 84 SFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRA 143
++D+ P RP S + + +Q+ N K + + G D+ + D+R+
Sbjct: 141 AWDMRSPH--RPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLK 198
Query: 144 GHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
GH S +S+ F +K E++S D + WD+SK
Sbjct: 199 GHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSK 233
>sp|Q5XJS5|THOC6_DANRE THO complex subunit 6 homolog OS=Danio rerio GN=thoc6 PE=2 SV=1
Length = 323
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 13/144 (9%)
Query: 46 RSKDVQLVTDVGNGPVTSLC------FKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESY 99
RS+ L +GPV SL +GN +I S + +K A+W +Y
Sbjct: 48 RSQKPILNFTAHDGPVFSLLSTESHLLSAGNGEISAWSWAELIKK---STKAAWTRKPNY 104
Query: 100 NYNKE--EINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPW 157
+ E EIN ++ NPK + L ++ I+D+ +KS+ GH+ + F
Sbjct: 105 ETSLEIPEINAMIINPKDNNLIVGGGDNNIHIMDMETGT-FKSVLKGHTDYIHCLSFKE- 162
Query: 158 KPWEVISGGLDSKLVMWDFSKGRP 181
+ E++SGG D + +WD RP
Sbjct: 163 REGEILSGGEDGAVRIWDSRTNRP 186
>sp|Q9W7I5|RBBP4_CHICK Histone-binding protein RBBP4 OS=Gallus gallus GN=RBBP4 PE=1 SV=3
Length = 425
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 9/178 (5%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDL-------RSKDVQLVTDVGNGPVT 62
RLRGH+ + + G + S+ +D IC +D+ + D + + V
Sbjct: 172 RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Query: 63 SLCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF-LAC 120
+ + +E + V+ +++ +D + +P S + + E+N + NP S F LA
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 121 ADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
V + D+R L H VQ+ P + S G D +L +WD SK
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325
D ++ I D +SV HTA +C++F+ + E L +G DK V +WD
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF--ILATGSADKTVALWDLRNL 306
Query: 326 Q--------------GVQTSINNDLLIKNINLNKKVN 348
+ VQ S +N+ ++ + ++++N
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
>sp|Q60972|RBBP4_MOUSE Histone-binding protein RBBP4 OS=Mus musculus GN=Rbbp4 PE=1 SV=5
Length = 425
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 9/178 (5%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDL-------RSKDVQLVTDVGNGPVT 62
RLRGH+ + + G + S+ +D IC +D+ + D + + V
Sbjct: 172 RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Query: 63 SLCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF-LAC 120
+ + +E + V+ +++ +D + +P S + + E+N + NP S F LA
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 121 ADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
V + D+R L H VQ+ P + S G D +L +WD SK
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325
D ++ I D +SV HTA +C++F+ + E L +G DK V +WD
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF--ILATGSADKTVALWDLRNL 306
Query: 326 Q--------------GVQTSINNDLLIKNINLNKKVN 348
+ VQ S +N+ ++ + ++++N
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
>sp|Q09028|RBBP4_HUMAN Histone-binding protein RBBP4 OS=Homo sapiens GN=RBBP4 PE=1 SV=3
Length = 425
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 9/178 (5%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDL-------RSKDVQLVTDVGNGPVT 62
RLRGH+ + + G + S+ +D IC +D+ + D + + V
Sbjct: 172 RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Query: 63 SLCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF-LAC 120
+ + +E + V+ +++ +D + +P S + + E+N + NP S F LA
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 121 ADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
V + D+R L H VQ+ P + S G D +L +WD SK
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325
D ++ I D +SV HTA +C++F+ + E L +G DK V +WD
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF--ILATGSADKTVALWDLRNL 306
Query: 326 Q--------------GVQTSINNDLLIKNINLNKKVN 348
+ VQ S +N+ ++ + ++++N
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
>sp|Q3MHL3|RBBP4_BOVIN Histone-binding protein RBBP4 OS=Bos taurus GN=RBBP4 PE=1 SV=3
Length = 425
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 9/178 (5%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDL-------RSKDVQLVTDVGNGPVT 62
RLRGH+ + + G + S+ +D IC +D+ + D + + V
Sbjct: 172 RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Query: 63 SLCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF-LAC 120
+ + +E + V+ +++ +D + +P S + + E+N + NP S F LA
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 121 ADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
V + D+R L H VQ+ P + S G D +L +WD SK
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325
D ++ I D +SV HTA +C++F+ + E L +G DK V +WD
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF--ILATGSADKTVALWDLRNL 306
Query: 326 Q--------------GVQTSINNDLLIKNINLNKKVN 348
+ VQ S +N+ ++ + ++++N
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
>sp|O22466|MSI1_SOLLC WD-40 repeat-containing protein MSI1 OS=Solanum lycopersicum
GN=MSI1 PE=2 SV=1
Length = 424
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDL------RSKDVQLVTDVGNGPVTS 63
RLRGH S+ + G + S +D IC +D+ ++ + + V G V
Sbjct: 173 RLRGHSTEGYGLSWSQFKQGHLLSGSDDSHICLWDINATPKNKALEAMQIFKVHEGVVED 232
Query: 64 LCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF-LACA 121
+ + +E + V + + +D+ P+ +P++S ++ E+N + NP + + +A
Sbjct: 233 VAWHLRHEYLFGSVGDDQYLHVWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATG 292
Query: 122 DDGGDVKIIDIRQHCLYKSLRAGHSSIC--SSVQFIPWKPW-EVISGG--LDSKLVMWDF 176
VK+ D+R K A H+ C V + W P E I L +L++WD
Sbjct: 293 STDKTVKLFDLR-----KISTALHTLDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
Query: 177 SK 178
S+
Sbjct: 348 SR 349
Score = 35.8 bits (81), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 26/170 (15%)
Query: 30 FVASSGEDGCICWFDLRS----KDVQLVTDVGNGPVTSLCFKSGNEDIIYV-SSGKEVKS 84
S G+D + +DLR+ K +Q V V L F NE ++ S+ K VK
Sbjct: 242 LFGSVGDDQYLHVWDLRTPSVTKPIQSVV-AHQSEVNCLAFNPFNEWVVATGSTDKTVKL 300
Query: 85 FDVHMPASWRPLESYNYNKEEINQIVCNPKS-SFLACADDGGDVKIIDIRQ--------- 134
FD+ ++ L + + +KEE+ Q+ NPK+ + LA G + + D+ +
Sbjct: 301 FDLRKIST--ALHTLDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPED 358
Query: 135 ------HCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
L+ + GH+S S + P + W V S D+ L +W ++
Sbjct: 359 AEDGPPELLF--IHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAE 406
>sp|Q7KWL3|DCA13_DICDI DDB1- and CUL4-associated factor 13 OS=Dictyostelium discoideum
GN=wdsof1 PE=3 SV=1
Length = 445
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 126/303 (41%), Gaps = 38/303 (12%)
Query: 31 VASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMP 90
VAS DG I ++L S + NG V L F + ++ K +K + + +P
Sbjct: 82 VASGSCDGVIKLWNLTSLTERTTVQAHNGFVRGLVFTPDGKHMVSCGEDKTIKMWKLDLP 141
Query: 91 ASWRPLESYNYNKEEINQIVCNPKSSFLAC---------ADDG-GDVKIIDIRQHCLYKS 140
Y +N+E I+ + N K++F + A G V+I ++ ++
Sbjct: 142 -------EYTFNQEVIS--IYNGKNAFTSIDHQLNSTTFATSGPTSVEIWKHQRSTPIQT 192
Query: 141 LRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCY 200
L+ GHS+I + V+F P + + S D ++++D + P + + + N + C
Sbjct: 193 LQWGHSTI-TKVKFNPIETHLLASCTTDRDIILYDIRENSPAQKLTTSMRSN--SIAWCP 249
Query: 201 NPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTS 260
+F AIA D ++ I ++K V ++ S L+I S + + + GS
Sbjct: 250 TESFTLAIANEDENVYQY--DIRNLSKA-MTVHRDHVGSVLDIDYSPTGREIVSGSY--- 303
Query: 261 KVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 320
D + I K + Y T + +F ++++SG +D ++VW
Sbjct: 304 -----DKTIRIFPVDSYKSREVYY-----TNRMQRIFSVLFTADSRFILSGSDDMNIRVW 353
Query: 321 DCS 323
+
Sbjct: 354 KAN 356
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 116/274 (42%), Gaps = 28/274 (10%)
Query: 61 VTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLAC 120
++S+ F + + S+ K +K + + R LE + KE I+ I + S +
Sbjct: 49 ISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGH---KEGISDIAWSQDSKLICS 105
Query: 121 ADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
A D +KI D+ + K+L+ GH V F P + ++SG D + +WD + G
Sbjct: 106 ASDDKTIKIWDVESGKMVKTLK-GHKEYVFGVSFNP-QSNLIVSGSFDENVRIWDVNTGE 163
Query: 181 PNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESE 240
K+++ ++ G +N + + D T +I G +++ I+ E
Sbjct: 164 CTKMIS---AHSDPVTGVHFNRDGTLVV----SGSYDGTVRIWDTTTGQ-LLNTISTEDG 215
Query: 241 LNISRSKSTTKP---LKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVA 297
+S K + L G+ D + + + K+ Y+ GH C+
Sbjct: 216 KEVSFVKFSPNGKFVLAGT--------LDNTLRLWSYNNNKKCLKTYT--GHKNEKYCI- 264
Query: 298 FSMFGER-GKYLISGGNDKLVKVWDCSRFQGVQT 330
FS F GK++++G D L+ +++ + VQT
Sbjct: 265 FSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQT 298
>sp|Q5RF92|RBBP4_PONAB Histone-binding protein RBBP4 OS=Pongo abelii GN=RBBP4 PE=2 SV=3
Length = 425
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 9/178 (5%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDL-------RSKDVQLVTDVGNGPVT 62
RLRGH+ + + G + S+ +D IC +D+ + D + + V
Sbjct: 172 RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Query: 63 SLCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF-LAC 120
+ + +E + V+ +++ +D + +P S + + E+N + NP S F LA
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 121 ADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
V + D+R L H VQ+ P + S G D +L +WD SK
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325
D ++ I D +SV HTA +C++F+ + E L +G DK V +WD
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF--ILATGSADKTVALWDLRNL 306
Query: 326 Q--------------GVQTSINNDLLIKNINLNKKVN 348
+ VQ S +N+ ++ + ++++N
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
>sp|P90917|RBA1_CAEEL Probable histone-binding protein rba-1 OS=Caenorhabditis elegans
GN=rba-1 PE=3 SV=1
Length = 412
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 25/192 (13%)
Query: 3 DAEAKPR-RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDV---QLVTDVGN 58
D + +P+ RL+GH+ S R G + ++G+DG IC +D+ + Q+V
Sbjct: 158 DTKFRPQLRLKGHEGEGYGMSWSNTREGHLLTAGDDGMICHWDINANQTISGQIV----- 212
Query: 59 GPVTSLCFKSGN-EDIIY----------VSSGKEVKSFDVHMPASWRPLESYNYNKEEIN 107
P + S N ED+ + V +++ +D+ +P + + E+N
Sbjct: 213 -PQSKFKGHSSNAEDVSFHALHNFVFGSVGDDRKLNLWDLRQS---KPQLTAVGHTAEVN 268
Query: 108 QIVCNPKSSF-LACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGG 166
I NP S + LA V + D+R H+ V F P + S G
Sbjct: 269 CITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSG 328
Query: 167 LDSKLVMWDFSK 178
D ++++WD SK
Sbjct: 329 SDDRVIVWDISK 340
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 288 GHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSI--NNDLLIKNINLNK 345
GHTA +C+ F+ F E L +G DK V +WD + ++ +ND + + ++ +
Sbjct: 262 GHTAEVNCITFNPFSEY--ILATGSVDKTVALWDMRNMRKKMYTLKHHNDEIFQ-VSFSP 318
Query: 346 KVNWLCTTPTESENLVVCDTSKV 368
+ + + ++V D SK+
Sbjct: 319 HYETVLASSGSDDRVIVWDISKI 341
>sp|Q8AVH1|RBBP7_XENLA Histone-binding protein RBBP7 OS=Xenopus laevis GN=rbbp7 PE=2 SV=1
Length = 425
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 9/178 (5%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSK-------DVQLVTDVGNGPVT 62
RLRGH+ + + G + S+ +D +C +D+ + D + V + V
Sbjct: 171 RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVE 230
Query: 63 SLCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF-LAC 120
+ + +E + V+ +++ +D + +P S + + E+N + NP S F LA
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 290
Query: 121 ADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
V + D+R L H V + P + S G D +L +WD SK
Sbjct: 291 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325
D ++ I D +SV HTA +C++F+ + E L +G DK V +WD
Sbjct: 248 DQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEF--ILATGSADKTVALWDLRNL 305
Query: 326 Q 326
+
Sbjct: 306 K 306
>sp|Q75BY3|PRP46_ASHGO Pre-mRNA-splicing factor PRP46 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PRP46
PE=3 SV=2
Length = 425
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 7/179 (3%)
Query: 9 RRLRGHKATATC-CIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFK 67
R + GH C C+ D F S + W DL + +++ V +C
Sbjct: 107 RVINGHTGWVRCVCVDPVDNAWFATGSNDSTIRVW-DLATGKLKVTLQGHIMTVRDICIS 165
Query: 68 SGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDV 127
+ + + S K VK +D+ R ++ ++ + +P + A V
Sbjct: 166 ARHPYMFSASQDKLVKCWDLERNTVVR---DFHGTLSGVHSVDLHPSLDLIVSAGRDSVV 222
Query: 128 KIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVN 186
++ DIR +L AGH + V+ +P P +++S D+ + +WD G+P K +
Sbjct: 223 RVWDIRSRSCVLTL-AGHRGPINKVRCLPVDP-QIVSCSTDATVKLWDLVAGKPMKTLT 279
Score = 38.5 bits (88), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 30 FVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHM 89
+ S+G D + +D+RS+ L GP+ + + I+ S+ VK +D+
Sbjct: 212 LIVSAGRDSVVRVWDIRSRSCVLTLAGHRGPINKVRCLPVDPQIVSCSTDATVKLWDL-- 269
Query: 90 PASWRPLESYNYNKEEINQIVCNPKS-SFL-ACADDGGDVKIID 131
+ +P+++ ++K + + NP SF AC DD K++D
Sbjct: 270 -VAGKPMKTLTHHKRNVRDLAFNPTEFSFASACTDDIRSWKLVD 312
>sp|Q6BK34|HAT2_DEBHA Histone acetyltransferase type B subunit 2 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=HAT2 PE=3 SV=1
Length = 415
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 76 VSSGKEVKSFDVHMPASWRPLESYNYNKEE-INQIVCNPKSSFL-ACADDGGDVKIIDIR 133
VS K FD+ P P+ + + + E IN + +P S +L A + ++ ++D R
Sbjct: 232 VSDDKYFYLFDIRTPG--EPVSKFYHPESEGINSLSFSPFSQYLVATGNANSNISLLDTR 289
Query: 134 QHCLYKSLR-------AGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
+ ++ GHS +S++F P K + SG D +L++WD K
Sbjct: 290 KLSTKSAVSDGLLHTMMGHSDSITSLEFSPHKDGMLASGSQDRRLILWDLFK 341
>sp|O93377|RBP4A_XENLA Histone-binding protein RBBP4-A OS=Xenopus laevis GN=rbbp4-a PE=1
SV=3
Length = 425
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 9/178 (5%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDL-------RSKDVQLVTDVGNGPVT 62
RLRGH+ + + G + S+ +D IC +D+ + D + + V
Sbjct: 172 RLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Query: 63 SLCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF-LAC 120
+ + +E + V+ +++ +D + +P S + + E+N + NP S F LA
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 121 ADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
V + D+R L H VQ+ P + S G D +L +WD SK
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325
D ++ I D +SV HTA +C++F+ + E L +G DK V +WD
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF--ILATGSADKTVALWDLRNL 306
Query: 326 Q--------------GVQTSINNDLLIKNINLNKKVN 348
+ VQ S +N+ ++ + ++++N
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
>sp|O14021|PRW1_SCHPO RbAp48-related WD40 repeat-containing protein prw1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prw1 PE=1 SV=1
Length = 431
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 2 TDAEAKPR-RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKD-------VQLV 53
+++ KP+ RL H T + G + S +D + +DL + + +++
Sbjct: 170 SESPLKPKYRLTKHTQPCTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVH 229
Query: 54 TDVGNGPVTSLCFKSGNEDIIY-VSSGKEVKSFDVHMP-ASWRPLESYNYNKEEINQIVC 111
V+ + F ++D++ VS + + D+ P AS +P S + + I+ +
Sbjct: 230 ISSHEKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAF 289
Query: 112 NPKSSFL--ACADDGG----DVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISG 165
NP + F+ C+ D D++ ++ R H L GH I + + F P + + S
Sbjct: 290 NPHNDFILATCSTDKTIALWDLRNLNQRLHTL-----EGHEDIVTKISFSPHEEPILAST 344
Query: 166 GLDSKLVMWDFSK---GRPNKIVNFGLPE 191
D + ++WD S+ +P + G PE
Sbjct: 345 SADRRTLVWDLSRIGEDQPAEEAQDGPPE 373
>sp|Q6INH0|RBP4B_XENLA Histone-binding protein RBBP4-B OS=Xenopus laevis GN=rbbp4-b PE=1
SV=3
Length = 425
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 9/178 (5%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDL-------RSKDVQLVTDVGNGPVT 62
RLRGH+ + + G + S+ +D IC +D+ + D + + V
Sbjct: 172 RLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Query: 63 SLCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF-LAC 120
+ + +E + V+ +++ +D + +P S + + E+N + NP S F LA
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 121 ADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
V + D+R L H VQ+ P + S G D +L +WD SK
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325
D ++ I D +SV HTA +C++F+ + E L +G DK V +WD
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF--ILATGSADKTVALWDLRNL 306
Query: 326 Q--------------GVQTSINNDLLIKNINLNKKVN 348
+ VQ S +N+ ++ + ++++N
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
>sp|Q6P315|RBBP7_XENTR Histone-binding protein RBBP7 OS=Xenopus tropicalis GN=rbbp7 PE=2
SV=1
Length = 425
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 74/178 (41%), Gaps = 9/178 (5%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSK-------DVQLVTDVGNGPVT 62
RLRGH+ + + G + S+ +D +C +D+ + D + + + V
Sbjct: 171 RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVE 230
Query: 63 SLCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF-LAC 120
+ + +E + V+ +++ +D + +P S + + E+N + NP S F LA
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 290
Query: 121 ADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
V + D+R L H V + P + S G D +L +WD SK
Sbjct: 291 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325
D ++ I D +SV HTA +C++F+ + E L +G DK V +WD
Sbjct: 248 DQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEF--ILATGSADKTVALWDLRNL 305
Query: 326 Q 326
+
Sbjct: 306 K 306
>sp|Q9I8G9|RBBP7_CHICK Histone-binding protein RBBP7 OS=Gallus gallus GN=RBBP7 PE=1 SV=1
Length = 424
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 74/178 (41%), Gaps = 9/178 (5%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSK-------DVQLVTDVGNGPVT 62
RLRGH+ + + G + S+ +D +C +D+ + D + + + V
Sbjct: 170 RLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVE 229
Query: 63 SLCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF-LAC 120
+ + +E + V+ +++ +D + +P S + + E+N + NP S F LA
Sbjct: 230 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 289
Query: 121 ADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
V + D+R L H V + P + S G D +L +WD SK
Sbjct: 290 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 347
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325
D ++ I D +SV HTA +C++F+ + E L +G DK V +WD
Sbjct: 247 DQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEF--ILATGSADKTVALWDLRNL 304
Query: 326 Q 326
+
Sbjct: 305 K 305
>sp|Q54JS5|WDR24_DICDI WD repeat-containing protein 24 homolog OS=Dictyostelium discoideum
GN=wdr24 PE=3 SV=1
Length = 1023
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 30 FVASSGEDGCIC-WFDLR--SKDVQLVTDVGNGPVTSLCFKSGNEDIIYV-SSGKEVKSF 85
+A++ +G + W +R SK V+ V + V L + D I S ++ +
Sbjct: 85 LIATAATNGAVVIWNTVREGSKSVERVFTDHSRAVNKLAWHPEKLDCILTGSQDNTLRMW 144
Query: 86 DVHMPASWRPLESYNYNKEEINQIVCNP-KSSFLACADDGGDVKIIDIRQHCLYKSLRAG 144
D+ A+ + +++ E I + NP +++ A A D G +++ DIR+ +
Sbjct: 145 DIRDSANASKI-TFSPKSESIRDVQFNPSQANQFAAAFDNGTIQLWDIRKPTIAVEKITS 203
Query: 145 HSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180
H + ++ + P + + SGG D + +WDFS G+
Sbjct: 204 HQGLVLTIDWHPEEKNIIASGGRDRAIRVWDFSNGK 239
>sp|Q5M7K4|RBBP4_XENTR Histone-binding protein RBBP4 OS=Xenopus tropicalis GN=rbbp4 PE=2
SV=3
Length = 425
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 9/178 (5%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDL-------RSKDVQLVTDVGNGPVT 62
RLRGH+ + + G + S+ +D IC +D+ + D + + V
Sbjct: 172 RLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Query: 63 SLCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF-LAC 120
+ + +E + V+ +++ +D + +P S + + E+N + NP S F LA
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 121 ADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
V + D+R L H VQ+ P + S G D +L +WD SK
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325
D ++ I D +SV HTA +C++F+ + E L +G DK V +WD
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF--ILATGSADKTVALWDLRNL 306
Query: 326 Q--------------GVQTSINNDLLIKNINLNKKVN 348
+ VQ S +N+ ++ + ++++N
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
>sp|F6ZT52|POC1B_XENTR POC1 centriolar protein homolog B OS=Xenopus tropicalis GN=poc1b
PE=2 SV=1
Length = 470
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 112/322 (34%), Gaps = 80/322 (24%)
Query: 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSL 64
+++ + GHK TC S VASS +D + + K V V +
Sbjct: 50 QSRAYKYPGHKEAVTCVQFSPSG-HLVASSSKDRTVRLWAPNIKGESSVLKAHTAVVRCV 108
Query: 65 CFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYN-KEEINQIVC---NPKSSFLAC 120
F S I S K +K++++H + + Y+ E N + C +P +A
Sbjct: 109 NFSSDGHTFITASDDKSIKAWNLHR-------QRFLYSLTEHTNWVRCARFSPDGRLIAS 161
Query: 121 ADDGGDVKIIDIRQHCLYKSL--RAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
D V+I DI + GHS+ V F P V S G+DS + +WD
Sbjct: 162 CSDDKTVRIWDITNRLCINTFVDYKGHSNY---VDFNPMGTC-VASAGVDSTVKVWDI-- 215
Query: 179 GRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIE 238
R NK++ N G ++P + + A DG V ++++
Sbjct: 216 -RTNKLLQHYQVHNAGVNSLSFHP----------------SGNYLLTASNDGTVKILDL- 257
Query: 239 SELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAF 298
L+G L Y++ GH VAF
Sbjct: 258 --------------LEGR-------------------------LIYTLHGHQGPVLSVAF 278
Query: 299 SMFGERGKYLISGGNDKLVKVW 320
S G++ SG D V VW
Sbjct: 279 SKSGDQ---FASGATDAQVLVW 297
Score = 32.0 bits (71), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 17/92 (18%)
Query: 286 VGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNK 345
+ HTA CV FS G I+ +DK +K W+ R + + + L +
Sbjct: 98 LKAHTAVVRCVNFS---SDGHTFITASDDKSIKAWNLHRQRFLYS------------LTE 142
Query: 346 KVNWL-CTTPTESENLVV-CDTSKVVKVYSIS 375
NW+ C + L+ C K V+++ I+
Sbjct: 143 HTNWVRCARFSPDGRLIASCSDDKTVRIWDIT 174
>sp|Q7ZTY4|RBBP7_DANRE Histone-binding protein RBBP7 OS=Danio rerio GN=rbbp7 PE=2 SV=1
Length = 426
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 9/178 (5%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSK-------DVQLVTDVGNGPVT 62
RLRGH+ + + G + S+ +D IC +D+ D + + V
Sbjct: 172 RLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVE 231
Query: 63 SLCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF-LAC 120
+ + +E + V+ +++ +D + +P S + + E+N + NP S F LA
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 121 ADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178
V + D+R L H VQ+ P + S G D +L +WD SK
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
Query: 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325
D ++ I D +SV HTA +C++F+ + E L +G DK V +WD
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF--ILATGSADKTVALWDLRNL 306
Query: 326 Q--------------GVQTSINNDLLIKNINLNKKVN 348
+ VQ S +N+ ++ + ++++N
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
>sp|A3LTS5|DSE1_PICST Protein DSE1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=DSE1 PE=3 SV=1
Length = 656
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 82 VKSFDVHMPASWRP---LESYNYNKEEINQIVCNPKS-SFLACADDGGDVKIIDIRQHCL 137
V FD+ P P LE + K NQ+ NP + + A A G V++ DIR+
Sbjct: 271 VSLFDLRQPKFTVPPSILEYASKKKLGANQMRWNPNNENVFAAAHRDGVVRLWDIRKQDN 330
Query: 138 YKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK--GRPNKIVNFGLPE 191
+ +L +GH+ SS++ W ++ SG D +V WD + N+ +N GL E
Sbjct: 331 FANL-SGHTDKISSLE---WNDGDLFSGSRDGNIVHWDLTSDLSANNQFMNCGLKE 382
>sp|Q55AR8|SNR40_DICDI U5 small nuclear ribonucleoprotein 40 kDa protein OS=Dictyostelium
discoideum GN=snrnp40 PE=3 SV=1
Length = 355
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 3/127 (2%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKS 68
+R+R H C +R P VAS +D FD RSK + PVTS+CF
Sbjct: 141 KRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSKGSTHLFQ-HKYPVTSVCFSD 199
Query: 69 GNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVK 128
++ +I ++ +D+ PL + +++ I + ++L K
Sbjct: 200 ASDQLITGGIDNVIRVWDIRNQED--PLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCK 257
Query: 129 IIDIRQH 135
I DIR +
Sbjct: 258 IWDIRPY 264
>sp|Q5FVN8|WSDU1_RAT WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus
norvegicus GN=Wdsub1 PE=2 SV=1
Length = 476
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 132/364 (36%), Gaps = 40/364 (10%)
Query: 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTS 63
AE L+ H CC S + S + + W + ++ G PV
Sbjct: 43 AELPHSPLKFHTYAVHCCSFSPSGHVLASCSTDGTTVLWSAHSGHTLTVLEQPGGSPVRV 102
Query: 64 LCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADD 123
CF + D Y++SG S + S++ + + +P L
Sbjct: 103 CCF---SPDSTYLASGAADGSVVLWNAHSYKLYRCGSVKDSSLVACAFSPDGGLLVTGSS 159
Query: 124 GGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIP-------WKPWEVISGGLDSKLVMWDF 176
GGD+ + D R CL+ C S P + + + S G D ++ +W
Sbjct: 160 GGDLTVWDDRMRCLHSEKAHDLGITCCSFSSQPLSGGEHGLQLYRLASCGQDCEIKLWVV 219
Query: 177 SKGRPNKIVNFGLPENNGNAGQC---YNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVD 233
S R ++ F L + +G C AF H + + +DK+ V+ G
Sbjct: 220 SFTR---VLGFELKYRSTLSGHCAPVLACAFSHDGQMLASGSVDKS----VIIYDIGTQS 272
Query: 234 VINIESELNISRSKSTTKP---LKGSQSTSK-VNIRDAEMEILDQSGGKRLHLDYSVGGH 289
V++ ++ + P L + S K VNI ++E Q+G L + +
Sbjct: 273 VLHTLTQHTRYVTTCAFAPNTLLLATGSMDKTVNIWQFDLETPCQAGSVSDQLKHFIEDW 332
Query: 290 TAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQG------VQTSINNDLLIKNINL 343
+ + K+L + G + LV ++ + G + S+ D+ I+++ L
Sbjct: 333 SEE----------DVSKWLRAQGLEDLVDIFRTNNIDGKELLHLTKESLAGDMKIESLGL 382
Query: 344 NKKV 347
KV
Sbjct: 383 RSKV 386
>sp|Q4P9P9|LIS1_USTMA Nuclear distribution protein PAC1 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=PAC1 PE=3 SV=1
Length = 453
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 119/289 (41%), Gaps = 51/289 (17%)
Query: 60 PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF-L 118
PVT + F I S VK +D R L+ + + + + + K ++ L
Sbjct: 124 PVTKVSFHPVFSQIASASEDTTVKLWDWETGDFERTLKGHT---KAVQDVDFDSKGNYVL 180
Query: 119 ACADDGGDVKIIDIRQHCLYKSLRA--GHSSICSSVQFIPWKPWEVISGGLDSKLVMWDF 176
+C+ D +K+ D YK+++ GH SSV+F+P + ++S D + +W+F
Sbjct: 181 SCSSDLS-IKVWDANND--YKNIKTLQGHDHSVSSVRFLPGDDY-IVSASRDKTIKIWEF 236
Query: 177 SKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADML-----DKTNKICVVAKGDGV 231
S G K + Q + AI DA L D+T ++ V+ G+
Sbjct: 237 STGFCTKTL------------QGHAEWVRSAIPSDDAKWLVSCSTDQTARVWDVSSGETK 284
Query: 232 VDVINIESELNIS-----------RSKSTTKPLKGSQSTSKV-------NIRDAEMEILD 273
V++ E + ++ R ++ P +++ + RD + I D
Sbjct: 285 VELRGHEHVVEVAIFAPVASYAAIRQLASLDPNASKDASASMAGQFVATGSRDKTIRIWD 344
Query: 274 QSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDC 322
G+ L ++ GH +AFS GK L+S +DK +++WD
Sbjct: 345 SISGQCLK---TLTGHDNWVRGLAFS---PNGKSLLSVSDDKTMRLWDL 387
>sp|Q5R654|RBBP7_PONAB Histone-binding protein RBBP7 OS=Pongo abelii GN=RBBP7 PE=3 SV=1
Length = 426
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 14/181 (7%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSK-------DVQLVTDVGNGPVT 62
RLRGH+ + + G + S+ +D +C +D+ + D + V + V
Sbjct: 171 RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVE 230
Query: 63 SLCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF-LAC 120
+ + +E + V+ +++ +D + +P + + E+N + NP S F LA
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
Query: 121 ADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWE---VISGGLDSKLVMWDFS 177
V + D+R L L S Q + W P + S G D +L +WD S
Sbjct: 291 GSADKTVALWDLRN--LKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVWDLS 348
Query: 178 K 178
K
Sbjct: 349 K 349
Score = 32.0 bits (71), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 17/78 (21%)
Query: 286 VGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSR---------------FQGVQT 330
V HTA +C++F+ + E L +G DK V +WD FQ V
Sbjct: 268 VDAHTAEVNCLSFNPYSEF--ILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVVHW 325
Query: 331 SINNDLLIKNINLNKKVN 348
S +N+ ++ + ++++N
Sbjct: 326 SPHNETILASSGTDRRLN 343
>sp|P90916|LIN53_CAEEL Probable histone-binding protein lin-53 OS=Caenorhabditis elegans
GN=lin-53 PE=1 SV=2
Length = 417
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 26/185 (14%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFD----------LRSKDV-----QLVT 54
RL+GH + ++ G + S+ +D +C +D L++KDV +V
Sbjct: 167 RLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVE 226
Query: 55 DVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPK 114
DV + F S +D K++ +DV P + + E+N + NP
Sbjct: 227 DVAWHVLHDGVFGSVGDD-------KKLLIWDVRTST---PGHCIDAHSAEVNCLAFNPY 276
Query: 115 SSF-LACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVM 173
S F LA V + D+R + H VQ+ P + S G D +L +
Sbjct: 277 SEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHV 336
Query: 174 WDFSK 178
WD SK
Sbjct: 337 WDLSK 341
Score = 35.4 bits (80), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 78/189 (41%), Gaps = 17/189 (8%)
Query: 11 LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGN 70
+GH++ G S G+D + +D+R+ D + V L F +
Sbjct: 218 FKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYS 277
Query: 71 EDIIYV-SSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKS-SFLACADDGGDVK 128
E I+ S+ K V +D+ L S+ +++EI Q+ +P + + LA + +
Sbjct: 278 EFILATGSADKTVALWDLRNLR--MKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLH 335
Query: 129 IIDIRQHCLYKS-------------LRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWD 175
+ D+ + +S + GH++ S + P +PW V S D+ L +W
Sbjct: 336 VWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQ 395
Query: 176 FSKGRPNKI 184
+ N++
Sbjct: 396 MADNIYNEV 404
>sp|Q9D0I6|WSDU1_MOUSE WD repeat, SAM and U-box domain-containing protein 1 OS=Mus
musculus GN=Wdsub1 PE=2 SV=1
Length = 474
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 89/246 (36%), Gaps = 19/246 (7%)
Query: 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTS 63
AE L+ H CC S + S + + W + ++ G PV
Sbjct: 43 AELPYSPLKFHTYAVHCCCFSPSGHVLASCSTDGTTVLWSSHSGHTLTVLEQPGGSPVRV 102
Query: 64 LCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADD 123
CF + D Y++SG S + +++ + + +P
Sbjct: 103 CCF---SPDSAYLASGAADGSIALWNAQTYKLYRCGSVKDSSLVACAFSPDGGLFVTGSS 159
Query: 124 GGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIP------WKPWEVISGGLDSKLVMWDFS 177
GGD+ + D R CL+ C S P + +++ S G D ++ +W +
Sbjct: 160 GGDLTVWDDRMRCLHSEKAHDLGITCCSFSSQPLSGGEGLQSYQLASCGQDCEIKLWAVT 219
Query: 178 KGRPNKIVNFGLPENNGNAGQC---YNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDV 234
R ++ F L + +G C AF H + + +DK+ V+ G G V
Sbjct: 220 ITR---VLGFELKYKSTLSGHCAPVLACAFSHDGKMLASGSVDKS----VIIHGIGPQSV 272
Query: 235 INIESE 240
++ ++
Sbjct: 273 LHTLTQ 278
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 145,709,316
Number of Sequences: 539616
Number of extensions: 6348690
Number of successful extensions: 18804
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 561
Number of HSP's that attempted gapping in prelim test: 16680
Number of HSP's gapped (non-prelim): 2470
length of query: 375
length of database: 191,569,459
effective HSP length: 119
effective length of query: 256
effective length of database: 127,355,155
effective search space: 32602919680
effective search space used: 32602919680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)