Query 017194
Match_columns 375
No_of_seqs 696 out of 1557
Neff 12.1
Searched_HMMs 29240
Date Mon Mar 25 10:28:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017194.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017194hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1.1E-54 3.9E-59 373.9 38.8 296 8-375 101-410 (410)
2 2ynn_A Coatomer subunit beta'; 100.0 3.6E-53 1.2E-57 350.3 39.9 296 5-374 3-300 (304)
3 3ow8_A WD repeat-containing pr 100.0 9E-54 3.1E-58 356.0 35.5 292 7-375 24-320 (321)
4 1got_B GT-beta; complex (GTP-b 100.0 4E-53 1.4E-57 355.7 39.2 295 5-373 45-340 (340)
5 1nr0_A Actin interacting prote 100.0 6.2E-53 2.1E-57 381.1 39.6 348 5-375 137-610 (611)
6 2pbi_B Guanine nucleotide-bind 100.0 5.5E-52 1.9E-56 350.2 40.2 295 6-373 55-354 (354)
7 4g56_B MGC81050 protein; prote 100.0 1.4E-52 4.8E-57 354.1 34.3 293 11-375 38-342 (357)
8 4gqb_B Methylosome protein 50; 100.0 3.1E-52 1.1E-56 349.1 34.3 290 12-375 27-330 (344)
9 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.4E-52 1.5E-56 349.9 34.8 324 1-375 1-334 (345)
10 3iz6_a 40S ribosomal protein R 100.0 4.5E-52 1.5E-56 354.5 32.9 307 6-375 57-374 (380)
11 4ery_A WD repeat-containing pr 100.0 7.9E-51 2.7E-55 338.1 37.8 294 6-375 14-311 (312)
12 3frx_A Guanine nucleotide-bind 100.0 1.3E-49 4.4E-54 331.2 38.6 299 5-374 7-315 (319)
13 2hes_X YDR267CP; beta-propelle 100.0 1.2E-49 4.2E-54 332.9 36.6 308 4-375 3-327 (330)
14 1nr0_A Actin interacting prote 100.0 2.3E-49 7.9E-54 357.9 40.5 337 4-374 48-395 (611)
15 1erj_A Transcriptional repress 100.0 3.4E-49 1.2E-53 338.2 37.4 303 13-375 62-388 (393)
16 2ymu_A WD-40 repeat protein; u 100.0 1E-48 3.6E-53 352.7 39.4 324 4-373 251-577 (577)
17 4aow_A Guanine nucleotide-bind 100.0 4.2E-48 1.4E-52 325.8 39.2 306 1-375 24-336 (340)
18 2xzm_R RACK1; ribosome, transl 100.0 1.9E-48 6.4E-53 327.8 35.3 300 6-375 12-339 (343)
19 2ymu_A WD-40 repeat protein; u 100.0 8.3E-47 2.8E-51 340.3 39.5 325 4-374 210-537 (577)
20 1gxr_A ESG1, transducin-like e 100.0 3E-46 1E-50 314.0 37.5 285 10-374 46-335 (337)
21 3zwl_B Eukaryotic translation 100.0 5E-46 1.7E-50 316.6 38.5 289 7-375 24-345 (369)
22 1r5m_A SIR4-interacting protei 100.0 1.1E-46 3.7E-51 326.8 34.7 335 8-375 36-424 (425)
23 3odt_A Protein DOA1; ubiquitin 100.0 7.8E-46 2.7E-50 308.3 37.6 287 5-375 8-295 (313)
24 3ei3_B DNA damage-binding prot 100.0 1.9E-46 6.5E-51 320.8 33.8 310 5-375 63-381 (383)
25 1k8k_C P40, ARP2/3 complex 41 100.0 4.1E-46 1.4E-50 317.6 34.5 299 10-374 3-359 (372)
26 3gre_A Serine/threonine-protei 100.0 9.9E-47 3.4E-51 328.2 30.7 332 4-373 51-437 (437)
27 3dwl_C Actin-related protein 2 100.0 1.8E-47 6.2E-52 326.5 25.5 318 8-374 4-377 (377)
28 1sq9_A Antiviral protein SKI8; 100.0 2.4E-46 8.1E-51 321.9 32.2 308 7-375 8-394 (397)
29 3dm0_A Maltose-binding peripla 100.0 1.2E-45 4.2E-50 338.8 37.9 300 8-375 375-692 (694)
30 3i2n_A WD repeat-containing pr 100.0 9E-46 3.1E-50 313.7 32.9 307 9-375 12-352 (357)
31 1vyh_C Platelet-activating fac 100.0 1.1E-45 3.7E-50 318.1 33.7 253 3-323 138-410 (410)
32 3ow8_A WD repeat-containing pr 100.0 2.5E-45 8.5E-50 305.2 34.6 248 8-323 73-320 (321)
33 2ynn_A Coatomer subunit beta'; 100.0 1.8E-45 6.2E-50 304.2 32.9 255 49-375 4-258 (304)
34 3k26_A Polycomb protein EED; W 100.0 7.1E-46 2.4E-50 315.4 30.9 317 11-375 14-365 (366)
35 2pm9_A Protein WEB1, protein t 100.0 2.6E-46 9E-51 323.6 28.1 300 13-375 65-413 (416)
36 4e54_B DNA damage-binding prot 100.0 8.5E-46 2.9E-50 321.6 30.3 313 7-375 111-429 (435)
37 3sfz_A APAF-1, apoptotic pepti 100.0 2.2E-44 7.5E-49 351.1 40.9 351 8-375 608-1033(1249)
38 4gqb_B Methylosome protein 50; 100.0 2.3E-44 7.7E-49 301.5 34.9 246 12-325 79-332 (344)
39 4h5i_A Guanine nucleotide-exch 100.0 4.7E-45 1.6E-49 308.9 29.9 299 4-375 3-342 (365)
40 3vl1_A 26S proteasome regulato 100.0 2.4E-45 8.3E-50 317.9 26.9 339 17-375 58-418 (420)
41 2j04_B YDR362CP, TAU91; beta p 100.0 4.1E-45 1.4E-49 320.6 27.7 302 10-375 129-516 (524)
42 2oaj_A Protein SNI1; WD40 repe 100.0 3.1E-44 1.1E-48 335.5 34.8 348 11-374 13-517 (902)
43 1pgu_A Actin interacting prote 100.0 1.3E-43 4.4E-48 321.9 38.0 354 4-375 149-613 (615)
44 2pm9_A Protein WEB1, protein t 100.0 3.8E-45 1.3E-49 316.3 26.4 295 14-375 11-336 (416)
45 1got_B GT-beta; complex (GTP-b 100.0 1.4E-43 4.8E-48 297.6 34.6 251 4-321 86-340 (340)
46 3mkq_A Coatomer beta'-subunit; 100.0 2.8E-43 9.7E-48 329.6 38.0 295 5-374 3-300 (814)
47 1pgu_A Actin interacting prote 100.0 7.1E-43 2.4E-47 317.0 39.2 330 6-375 54-571 (615)
48 3frx_A Guanine nucleotide-bind 100.0 2.5E-43 8.4E-48 293.3 33.1 256 7-325 57-318 (319)
49 4a11_B DNA excision repair pro 100.0 4.4E-43 1.5E-47 302.6 35.3 312 4-375 32-364 (408)
50 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.5E-43 8.5E-48 296.6 32.1 271 12-326 58-337 (345)
51 2pm7_B Protein transport prote 100.0 6.8E-43 2.3E-47 287.8 33.9 256 8-324 2-285 (297)
52 2oaj_A Protein SNI1; WD40 repe 100.0 8.3E-43 2.8E-47 325.9 37.7 347 13-374 56-659 (902)
53 4aez_A CDC20, WD repeat-contai 100.0 8.3E-43 2.9E-47 299.8 34.6 286 12-375 88-379 (401)
54 3sfz_A APAF-1, apoptotic pepti 100.0 1.7E-43 5.7E-48 344.9 33.4 349 4-375 688-1157(1249)
55 2pm7_B Protein transport prote 100.0 1.5E-42 5E-47 285.8 33.7 264 52-375 3-284 (297)
56 1gxr_A ESG1, transducin-like e 100.0 5.5E-43 1.9E-47 294.1 31.8 284 14-375 8-295 (337)
57 2hes_X YDR267CP; beta-propelle 100.0 5.5E-43 1.9E-47 292.6 31.3 255 8-324 49-328 (330)
58 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.3E-41 4.4E-46 296.5 40.4 320 6-375 109-441 (445)
59 2pbi_B Guanine nucleotide-bind 100.0 4.6E-42 1.6E-46 289.6 35.4 252 4-321 95-354 (354)
60 2xzm_R RACK1; ribosome, transl 100.0 6.4E-42 2.2E-46 287.9 34.2 261 7-325 68-341 (343)
61 4g56_B MGC81050 protein; prote 100.0 2.2E-42 7.6E-47 291.8 30.7 251 8-325 87-344 (357)
62 3bg1_A Protein SEC13 homolog; 100.0 5.3E-43 1.8E-47 290.9 26.1 254 9-324 7-293 (316)
63 3v7d_B Cell division control p 100.0 1.6E-41 5.3E-46 297.8 36.5 282 7-375 113-420 (464)
64 3mmy_A MRNA export factor; mRN 100.0 2.1E-42 7.2E-47 294.1 30.0 307 4-373 28-343 (368)
65 1yfq_A Cell cycle arrest prote 100.0 4.3E-42 1.5E-46 289.4 31.1 283 9-368 5-315 (342)
66 4gga_A P55CDC, cell division c 100.0 4.9E-41 1.7E-45 290.4 38.0 275 18-374 108-393 (420)
67 1erj_A Transcriptional repress 100.0 1.4E-41 4.9E-46 291.0 33.8 255 17-325 125-390 (393)
68 3dw8_B Serine/threonine-protei 100.0 3.2E-42 1.1E-46 300.8 29.9 304 14-373 27-443 (447)
69 3bg1_A Protein SEC13 homolog; 100.0 1.5E-42 5.1E-47 288.2 24.4 263 53-374 8-291 (316)
70 3iz6_a 40S ribosomal protein R 100.0 4.9E-42 1.7E-46 292.6 27.5 268 4-325 97-376 (380)
71 1p22_A F-BOX/WD-repeat protein 100.0 3.2E-41 1.1E-45 293.0 33.1 281 12-375 130-413 (435)
72 4ery_A WD repeat-containing pr 100.0 1.2E-40 4.1E-45 276.8 34.8 256 4-323 54-311 (312)
73 3v7d_B Cell division control p 100.0 8.9E-41 3E-45 293.0 35.1 286 4-372 151-459 (464)
74 4ggc_A P55CDC, cell division c 100.0 1.3E-40 4.6E-45 277.4 34.3 280 18-375 28-314 (318)
75 3mkq_A Coatomer beta'-subunit; 100.0 9.8E-41 3.4E-45 312.4 37.3 342 4-374 44-458 (814)
76 3jrp_A Fusion protein of prote 100.0 1.4E-40 4.9E-45 284.0 34.9 263 5-324 1-287 (379)
77 2j04_B YDR362CP, TAU91; beta p 100.0 1.7E-41 5.8E-46 297.6 28.4 289 9-325 201-518 (524)
78 3f3f_A Nucleoporin SEH1; struc 100.0 1.8E-40 6.1E-45 280.1 32.5 296 8-326 4-339 (351)
79 4aez_A CDC20, WD repeat-contai 100.0 5.4E-40 1.9E-44 282.3 33.9 255 5-326 123-382 (401)
80 3dm0_A Maltose-binding peripla 100.0 2.9E-40 9.8E-45 303.3 33.5 270 7-324 422-693 (694)
81 3jrp_A Fusion protein of prote 100.0 4.1E-40 1.4E-44 281.2 31.5 269 48-374 1-285 (379)
82 2aq5_A Coronin-1A; WD40 repeat 100.0 1E-40 3.5E-45 287.0 27.8 286 17-374 36-340 (402)
83 3f3f_A Nucleoporin SEH1; struc 100.0 9E-40 3.1E-44 275.8 30.0 277 52-375 5-336 (351)
84 4aow_A Guanine nucleotide-bind 100.0 7.5E-39 2.6E-43 269.3 33.4 260 7-326 78-339 (340)
85 4gga_A P55CDC, cell division c 100.0 8.6E-39 2.9E-43 276.4 34.4 253 4-325 134-396 (420)
86 3k26_A Polycomb protein EED; W 100.0 1E-39 3.5E-44 277.4 28.2 250 14-324 68-366 (366)
87 1r5m_A SIR4-interacting protei 100.0 2.5E-39 8.6E-44 280.5 29.9 312 38-374 25-359 (425)
88 1k8k_C P40, ARP2/3 complex 41 100.0 3.7E-39 1.3E-43 274.6 29.5 287 7-326 44-363 (372)
89 3zwl_B Eukaryotic translation 100.0 4.4E-38 1.5E-42 267.6 35.2 255 4-325 63-347 (369)
90 3vl1_A 26S proteasome regulato 100.0 2.7E-38 9.2E-43 273.8 33.0 267 4-324 128-419 (420)
91 1sq9_A Antiviral protein SKI8; 100.0 3E-38 1E-42 271.4 32.2 288 7-325 54-396 (397)
92 2xyi_A Probable histone-bindin 100.0 2.5E-38 8.7E-43 274.1 31.4 268 9-325 122-411 (430)
93 3jro_A Fusion protein of prote 100.0 4.7E-39 1.6E-43 296.7 28.4 260 8-324 2-285 (753)
94 3i2n_A WD repeat-containing pr 100.0 3.2E-38 1.1E-42 267.3 30.6 273 12-325 62-354 (357)
95 3dwl_C Actin-related protein 2 100.0 2.5E-39 8.6E-44 276.1 24.0 268 53-374 6-279 (377)
96 2xyi_A Probable histone-bindin 100.0 6.2E-38 2.1E-42 271.7 32.8 297 16-375 46-409 (430)
97 2j04_A TAU60, YPL007P, hypothe 100.0 1E-38 3.5E-43 273.5 25.5 268 13-374 13-295 (588)
98 3gre_A Serine/threonine-protei 100.0 3.5E-39 1.2E-43 280.7 23.1 283 23-375 35-358 (437)
99 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.2E-37 4E-42 271.7 32.6 310 15-374 4-389 (450)
100 3vu4_A KMHSV2; beta-propeller 100.0 3.3E-37 1.1E-41 260.1 31.7 290 4-374 8-334 (355)
101 3jro_A Fusion protein of prote 100.0 6.8E-38 2.3E-42 289.0 28.3 267 51-375 2-284 (753)
102 4a11_B DNA excision repair pro 100.0 1.7E-36 6E-41 261.3 33.7 288 13-375 97-404 (408)
103 3ei3_B DNA damage-binding prot 100.0 3.1E-37 1.1E-41 263.7 28.1 255 46-375 61-338 (383)
104 3lrv_A PRE-mRNA-splicing facto 100.0 9.3E-38 3.2E-42 262.7 23.7 271 23-372 44-329 (343)
105 4ggc_A P55CDC, cell division c 100.0 8.7E-36 3E-40 248.2 35.1 253 4-325 54-316 (318)
106 2aq5_A Coronin-1A; WD40 repeat 100.0 6.2E-37 2.1E-41 263.4 28.7 256 7-327 73-345 (402)
107 4gq1_A NUP37; propeller, trans 100.0 1.3E-37 4.5E-42 266.2 23.7 318 16-374 16-387 (393)
108 4e54_B DNA damage-binding prot 100.0 4.5E-37 1.5E-41 266.8 27.3 255 9-326 158-432 (435)
109 4h5i_A Guanine nucleotide-exch 100.0 5.9E-37 2E-41 259.3 26.8 244 10-325 68-344 (365)
110 1p22_A F-BOX/WD-repeat protein 100.0 1.3E-36 4.3E-41 264.1 29.5 255 4-326 162-416 (435)
111 1yfq_A Cell cycle arrest prote 100.0 5.3E-37 1.8E-41 258.3 25.5 250 53-375 6-281 (342)
112 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.8E-35 6.2E-40 257.7 35.3 282 4-325 148-443 (445)
113 3dw8_B Serine/threonine-protei 100.0 8.8E-37 3E-41 266.4 27.0 263 57-375 27-372 (447)
114 2j04_A TAU60, YPL007P, hypothe 100.0 1.3E-36 4.3E-41 260.6 26.1 272 7-364 44-349 (588)
115 3bws_A Protein LP49; two-domai 100.0 8.1E-36 2.8E-40 259.2 31.8 285 8-375 116-431 (433)
116 3odt_A Protein DOA1; ubiquitin 100.0 3.1E-35 1.1E-39 244.3 33.3 247 4-326 48-298 (313)
117 1l0q_A Surface layer protein; 100.0 1.1E-34 3.6E-39 248.8 34.7 266 28-375 2-274 (391)
118 2w18_A PALB2, fancn, partner a 100.0 2.7E-35 9.1E-40 237.3 28.3 297 7-375 27-356 (356)
119 3mmy_A MRNA export factor; mRN 100.0 1E-34 3.5E-39 246.7 30.7 259 43-375 24-303 (368)
120 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.2E-34 7.4E-39 251.1 32.7 264 11-324 98-391 (450)
121 1l0q_A Surface layer protein; 100.0 1.3E-33 4.4E-38 242.0 36.4 252 4-328 21-279 (391)
122 3vu4_A KMHSV2; beta-propeller 100.0 1.8E-34 6.2E-39 243.3 26.3 260 42-375 3-270 (355)
123 3lrv_A PRE-mRNA-splicing facto 100.0 1.2E-34 4.1E-39 243.7 21.9 230 65-374 43-290 (343)
124 4gq1_A NUP37; propeller, trans 100.0 3.4E-34 1.2E-38 245.1 21.3 248 22-323 96-388 (393)
125 1nir_A Nitrite reductase; hemo 100.0 1.1E-31 3.6E-36 237.6 33.2 325 22-375 144-513 (543)
126 3bws_A Protein LP49; two-domai 100.0 1.2E-31 4.1E-36 233.0 32.3 244 10-324 164-432 (433)
127 2w18_A PALB2, fancn, partner a 100.0 1.9E-31 6.4E-36 215.1 25.9 252 6-323 77-356 (356)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.9E-31 6.5E-36 229.3 23.5 279 15-375 62-386 (415)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.7E-30 9.1E-35 222.1 25.3 269 3-354 103-407 (415)
130 2ecf_A Dipeptidyl peptidase IV 100.0 6.1E-29 2.1E-33 230.2 32.3 320 15-374 36-457 (741)
131 3u4y_A Uncharacterized protein 100.0 1.3E-27 4.3E-32 200.1 33.6 292 22-375 4-303 (331)
132 1xfd_A DIP, dipeptidyl aminope 100.0 6.5E-29 2.2E-33 229.5 26.7 318 16-363 17-427 (723)
133 1k32_A Tricorn protease; prote 100.0 4E-28 1.4E-32 232.1 30.0 338 5-375 42-460 (1045)
134 1nir_A Nitrite reductase; hemo 100.0 3.2E-27 1.1E-31 208.9 32.5 301 3-327 167-517 (543)
135 1ri6_A Putative isomerase YBHE 100.0 4.7E-27 1.6E-31 197.5 31.3 277 29-374 6-306 (343)
136 2ojh_A Uncharacterized protein 100.0 1.6E-27 5.4E-32 196.1 25.2 259 33-367 17-293 (297)
137 1pby_B Quinohemoprotein amine 100.0 4.1E-27 1.4E-31 197.4 25.4 267 29-375 2-309 (337)
138 3vgz_A Uncharacterized protein 100.0 6.9E-26 2.4E-30 191.2 33.1 278 14-366 39-334 (353)
139 1k32_A Tricorn protease; prote 100.0 7.6E-27 2.6E-31 223.2 28.8 319 5-375 235-636 (1045)
140 2z3z_A Dipeptidyl aminopeptida 100.0 1.3E-26 4.4E-31 213.5 27.7 311 17-375 27-434 (706)
141 3u4y_A Uncharacterized protein 100.0 2.4E-25 8.2E-30 186.2 29.7 258 4-325 29-305 (331)
142 1ri6_A Putative isomerase YBHE 100.0 3.8E-25 1.3E-29 185.9 29.3 255 13-323 35-307 (343)
143 3hfq_A Uncharacterized protein 99.9 1.1E-24 3.9E-29 183.3 29.8 272 36-374 14-315 (347)
144 3o4h_A Acylamino-acid-releasin 99.9 1.1E-25 3.7E-30 202.6 23.9 269 14-374 20-313 (582)
145 2oit_A Nucleoporin 214KDA; NH2 99.9 1.3E-24 4.5E-29 187.3 27.8 209 15-240 36-279 (434)
146 2ojh_A Uncharacterized protein 99.9 1.6E-25 5.6E-30 184.0 20.8 241 7-315 33-293 (297)
147 2ecf_A Dipeptidyl peptidase IV 99.9 1.7E-25 5.8E-30 207.3 22.5 292 58-374 36-411 (741)
148 2z3z_A Dipeptidyl aminopeptida 99.9 1.2E-24 4.2E-29 200.3 27.7 284 16-326 82-437 (706)
149 1z68_A Fibroblast activation p 99.9 1.8E-24 6E-29 199.7 28.4 324 20-374 20-441 (719)
150 1jmx_B Amine dehydrogenase; ox 99.9 1.7E-24 6E-29 182.3 25.7 287 21-375 5-324 (349)
151 3hfq_A Uncharacterized protein 99.9 5.6E-24 1.9E-28 179.1 28.7 261 12-326 36-321 (347)
152 3scy_A Hypothetical bacterial 99.9 2.8E-23 9.7E-28 175.7 32.5 279 29-374 14-335 (361)
153 1pby_B Quinohemoprotein amine 99.9 4.8E-24 1.6E-28 178.7 24.4 250 4-326 20-312 (337)
154 3pe7_A Oligogalacturonate lyas 99.9 7E-24 2.4E-28 181.3 23.4 294 3-374 18-380 (388)
155 3vgz_A Uncharacterized protein 99.9 1.4E-22 4.7E-27 171.0 30.9 241 4-314 78-334 (353)
156 3scy_A Hypothetical bacterial 99.9 2.9E-22 1E-26 169.5 32.1 273 14-353 48-360 (361)
157 1xfd_A DIP, dipeptidyl aminope 99.9 2.8E-23 9.5E-28 191.9 24.4 293 4-326 46-445 (723)
158 3o4h_A Acylamino-acid-releasin 99.9 2.1E-23 7.2E-28 187.7 21.3 232 58-374 21-274 (582)
159 2oit_A Nucleoporin 214KDA; NH2 99.9 5.6E-22 1.9E-26 170.9 27.3 160 14-179 91-279 (434)
160 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.9E-21 6.6E-26 164.5 26.5 280 31-374 5-339 (365)
161 1jof_A Carboxy-CIS,CIS-muconat 99.9 3.4E-21 1.2E-25 163.0 23.9 261 15-325 39-342 (365)
162 3c5m_A Oligogalacturonate lyas 99.9 4E-22 1.4E-26 170.9 17.8 290 3-374 18-380 (396)
163 2oiz_A Aromatic amine dehydrog 99.9 1.3E-20 4.6E-25 158.6 24.3 272 36-375 29-333 (361)
164 4a5s_A Dipeptidyl peptidase 4 99.9 5.8E-21 2E-25 176.3 23.7 207 15-241 16-296 (740)
165 3fvz_A Peptidyl-glycine alpha- 99.9 2.1E-19 7.3E-24 149.6 30.1 257 15-324 23-322 (329)
166 1jmx_B Amine dehydrogenase; ox 99.9 1.6E-20 5.6E-25 158.0 23.6 212 4-244 30-330 (349)
167 3azo_A Aminopeptidase; POP fam 99.9 1.2E-20 4E-25 172.6 24.2 296 8-372 16-363 (662)
168 1z68_A Fibroblast activation p 99.9 2.6E-21 8.7E-26 178.6 18.0 278 63-374 20-344 (719)
169 2oiz_A Aromatic amine dehydrog 99.9 1.4E-19 4.7E-24 152.4 25.6 280 3-358 39-360 (361)
170 1q7f_A NHL, brain tumor CG1071 99.9 1.1E-18 3.8E-23 142.5 28.7 241 57-374 28-278 (286)
171 3azo_A Aminopeptidase; POP fam 99.9 2.8E-19 9.4E-24 163.5 26.7 217 6-239 58-325 (662)
172 1qks_A Cytochrome CD1 nitrite 99.9 9.6E-18 3.3E-22 148.1 35.3 319 28-374 167-536 (567)
173 1q7f_A NHL, brain tumor CG1071 99.9 3.2E-18 1.1E-22 139.8 30.2 245 13-325 27-281 (286)
174 2dg1_A DRP35, lactonase; beta 99.9 7.5E-19 2.6E-23 146.9 26.9 276 16-366 6-300 (333)
175 3fvz_A Peptidyl-glycine alpha- 99.9 6.2E-19 2.1E-23 146.8 25.9 253 58-374 23-320 (329)
176 3pe7_A Oligogalacturonate lyas 99.9 2.9E-19 9.9E-24 152.7 23.8 259 41-375 13-328 (388)
177 4a5s_A Dipeptidyl peptidase 4 99.8 2.4E-19 8.1E-24 165.6 24.3 288 60-374 18-351 (740)
178 3e5z_A Putative gluconolactona 99.8 4.1E-18 1.4E-22 139.8 28.4 249 4-325 16-287 (296)
179 2gop_A Trilobed protease; beta 99.8 3.6E-18 1.2E-22 143.5 25.5 257 16-374 15-329 (347)
180 2xdw_A Prolyl endopeptidase; a 99.8 1.1E-17 3.8E-22 153.9 30.1 248 14-326 123-416 (710)
181 3dsm_A Uncharacterized protein 99.8 1.4E-17 4.8E-22 138.4 27.5 257 36-375 15-301 (328)
182 2dg1_A DRP35, lactonase; beta 99.8 1.1E-16 3.8E-21 133.7 32.1 214 9-238 38-262 (333)
183 2z2n_A Virginiamycin B lyase; 99.8 8.4E-16 2.9E-20 126.2 36.6 283 11-374 10-293 (299)
184 2bkl_A Prolyl endopeptidase; m 99.8 9E-18 3.1E-22 154.0 23.0 249 13-327 118-400 (695)
185 3c5m_A Oligogalacturonate lyas 99.8 2.2E-18 7.6E-23 147.5 17.8 255 41-375 13-328 (396)
186 3no2_A Uncharacterized protein 99.8 1.4E-16 4.8E-21 128.5 26.6 190 28-245 5-201 (276)
187 3e5z_A Putative gluconolactona 99.8 1.3E-16 4.5E-21 130.9 26.8 240 49-368 18-279 (296)
188 2xdw_A Prolyl endopeptidase; a 99.8 7.2E-17 2.5E-21 148.5 27.7 273 25-374 81-412 (710)
189 2bkl_A Prolyl endopeptidase; m 99.8 6E-17 2.1E-21 148.6 26.4 274 24-375 76-396 (695)
190 1rwi_B Serine/threonine-protei 99.8 2.6E-16 9.1E-21 127.2 26.2 240 17-325 25-265 (270)
191 3dsm_A Uncharacterized protein 99.8 4.7E-16 1.6E-20 129.2 28.2 240 17-326 45-303 (328)
192 2mad_H Methylamine dehydrogena 99.8 2.6E-15 8.7E-20 126.4 32.0 284 22-375 27-349 (373)
193 1qks_A Cytochrome CD1 nitrite 99.8 9.2E-15 3.2E-19 129.2 36.5 299 4-327 186-541 (567)
194 1rwi_B Serine/threonine-protei 99.8 3.7E-16 1.3E-20 126.4 25.7 238 60-375 25-263 (270)
195 2qc5_A Streptogramin B lactona 99.8 2.6E-14 9E-19 117.3 35.7 279 14-374 18-298 (300)
196 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 7.8E-15 2.7E-19 121.4 29.9 251 9-325 11-300 (314)
197 3no2_A Uncharacterized protein 99.7 2E-15 6.7E-20 121.8 24.9 223 69-363 4-230 (276)
198 2gop_A Trilobed protease; beta 99.7 1.5E-15 5.2E-20 127.5 24.7 223 16-323 59-330 (347)
199 3c75_H MADH, methylamine dehyd 99.7 3E-15 1E-19 126.6 24.5 267 38-375 99-401 (426)
200 3sjl_D Methylamine dehydrogena 99.7 7.4E-15 2.5E-19 121.9 25.5 286 21-375 38-362 (386)
201 1yr2_A Prolyl oligopeptidase; 99.7 3E-15 1E-19 138.2 25.8 245 14-326 161-443 (741)
202 1yr2_A Prolyl oligopeptidase; 99.7 6.5E-15 2.2E-19 136.0 27.0 272 24-374 115-439 (741)
203 3hrp_A Uncharacterized protein 99.7 9.5E-14 3.3E-18 118.5 30.3 265 16-322 131-408 (409)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 5.2E-14 1.8E-18 116.4 28.0 246 57-375 16-298 (314)
205 2z2n_A Virginiamycin B lyase; 99.7 3E-13 1E-17 110.9 31.5 240 57-374 13-253 (299)
206 3g4e_A Regucalcin; six bladed 99.7 4.1E-13 1.4E-17 109.9 29.9 206 11-240 8-230 (297)
207 2mad_H Methylamine dehydrogena 99.7 1.2E-12 4.2E-17 110.1 32.0 257 4-326 56-352 (373)
208 3hrp_A Uncharacterized protein 99.7 3.9E-13 1.3E-17 114.8 28.7 267 59-375 131-409 (409)
209 3iuj_A Prolyl endopeptidase; h 99.6 1.6E-13 5.6E-18 125.6 25.7 201 13-239 126-359 (693)
210 3g4e_A Regucalcin; six bladed 99.6 2.6E-12 8.8E-17 105.2 29.7 233 57-364 11-260 (297)
211 3dr2_A Exported gluconolactona 99.6 1.3E-12 4.6E-17 107.3 27.0 207 6-239 35-267 (305)
212 2qc5_A Streptogramin B lactona 99.6 7.6E-12 2.6E-16 102.5 31.3 240 57-374 18-258 (300)
213 2ghs_A AGR_C_1268P; regucalcin 99.6 3.9E-12 1.3E-16 105.5 29.0 196 17-238 50-259 (326)
214 3sjl_D Methylamine dehydrogena 99.6 4.3E-13 1.5E-17 111.4 22.6 258 4-326 68-365 (386)
215 2qe8_A Uncharacterized protein 99.6 1.2E-13 4E-18 115.6 18.5 280 7-365 8-310 (343)
216 1mda_H Methylamine dehydrogena 99.6 2.8E-13 9.7E-18 112.7 19.6 271 29-375 33-345 (368)
217 1xip_A Nucleoporin NUP159; bet 99.6 2.2E-13 7.5E-18 113.6 18.8 182 17-227 39-232 (388)
218 1xip_A Nucleoporin NUP159; bet 99.6 3.2E-13 1.1E-17 112.7 18.6 180 104-362 38-230 (388)
219 3iuj_A Prolyl endopeptidase; h 99.5 1.4E-12 4.9E-17 119.4 23.5 240 57-374 127-403 (693)
220 3dr2_A Exported gluconolactona 99.5 7.6E-12 2.6E-16 102.8 25.5 242 50-374 36-304 (305)
221 2ghs_A AGR_C_1268P; regucalcin 99.5 5.6E-11 1.9E-15 98.5 28.8 226 60-364 50-290 (326)
222 3c75_H MADH, methylamine dehyd 99.5 2.4E-12 8.2E-17 108.9 19.9 259 3-326 107-404 (426)
223 2ece_A 462AA long hypothetical 99.5 1.1E-11 3.7E-16 103.7 22.8 208 25-239 93-352 (462)
224 3q7m_A Lipoprotein YFGL, BAMB; 99.5 5.9E-11 2E-15 100.6 28.0 261 28-373 103-375 (376)
225 1kb0_A Quinohemoprotein alcoho 99.5 3.2E-11 1.1E-15 109.6 26.3 160 28-188 128-356 (677)
226 2hz6_A Endoplasmic reticulum t 99.5 1.1E-13 3.7E-18 116.7 8.1 186 28-242 9-195 (369)
227 1yiq_A Quinohemoprotein alcoho 99.4 5.8E-11 2E-15 108.1 25.2 160 28-188 121-348 (689)
228 1kb0_A Quinohemoprotein alcoho 99.4 2.9E-11 1E-15 109.8 22.2 203 29-247 78-354 (677)
229 3hxj_A Pyrrolo-quinoline quino 99.4 1.3E-11 4.3E-16 102.8 18.3 298 19-374 23-322 (330)
230 3q7m_A Lipoprotein YFGL, BAMB; 99.4 1.1E-09 3.8E-14 92.8 29.8 269 28-374 53-335 (376)
231 2qe8_A Uncharacterized protein 99.4 4E-11 1.4E-15 100.2 19.4 238 59-374 17-276 (343)
232 2ece_A 462AA long hypothetical 99.4 7.3E-10 2.5E-14 92.8 25.8 246 68-364 93-399 (462)
233 1mda_H Methylamine dehydrogena 99.4 1.5E-11 5.3E-16 102.3 14.7 251 3-326 54-348 (368)
234 1npe_A Nidogen, entactin; glyc 99.3 6.4E-09 2.2E-13 83.5 28.8 223 16-263 36-262 (267)
235 1yiq_A Quinohemoprotein alcoho 99.3 3.3E-10 1.1E-14 103.2 23.0 211 37-268 182-534 (689)
236 1fwx_A Nitrous oxide reductase 99.3 4.1E-10 1.4E-14 97.7 21.6 277 31-364 18-406 (595)
237 2hz6_A Endoplasmic reticulum t 99.3 1.2E-12 4.2E-17 110.3 4.3 180 114-374 8-190 (369)
238 1fwx_A Nitrous oxide reductase 99.3 9.5E-11 3.3E-15 101.6 15.4 187 26-239 100-361 (595)
239 2iwa_A Glutamine cyclotransfer 99.3 3.5E-09 1.2E-13 83.4 22.5 216 7-239 11-237 (266)
240 1npe_A Nidogen, entactin; glyc 99.3 5E-08 1.7E-12 78.3 29.5 186 30-239 3-198 (267)
241 3hxj_A Pyrrolo-quinoline quino 99.2 1.6E-09 5.3E-14 90.0 20.8 218 29-325 108-325 (330)
242 2iwa_A Glutamine cyclotransfer 99.2 1.9E-08 6.4E-13 79.3 24.0 206 106-374 23-235 (266)
243 2fp8_A Strictosidine synthase; 99.2 6.8E-08 2.3E-12 79.8 28.5 242 16-325 19-314 (322)
244 3nol_A Glutamine cyclotransfer 99.2 2.3E-08 7.8E-13 77.8 23.5 193 106-364 45-243 (262)
245 3nol_A Glutamine cyclotransfer 99.2 7E-09 2.4E-13 80.6 20.3 198 14-229 39-245 (262)
246 3mbr_X Glutamine cyclotransfer 99.2 3.9E-08 1.3E-12 75.8 23.6 194 105-363 22-222 (243)
247 3nok_A Glutaminyl cyclase; bet 99.2 3.3E-08 1.1E-12 76.8 22.1 193 106-364 57-254 (268)
248 3nok_A Glutaminyl cyclase; bet 99.1 3.1E-08 1.1E-12 77.0 21.4 190 18-227 57-253 (268)
249 1kv9_A Type II quinohemoprotei 99.1 2E-08 6.8E-13 91.3 23.3 202 29-246 67-340 (668)
250 2fp8_A Strictosidine synthase; 99.1 6.3E-08 2.2E-12 80.0 23.7 238 59-374 19-311 (322)
251 3qqz_A Putative uncharacterize 99.1 5.3E-07 1.8E-11 70.6 26.4 215 10-237 21-251 (255)
252 1kv9_A Type II quinohemoprotei 99.1 1.1E-07 3.8E-12 86.4 25.8 159 28-188 117-343 (668)
253 4a2l_A BT_4663, two-component 99.1 1.8E-06 6.1E-11 80.6 34.7 292 15-373 214-523 (795)
254 4a2l_A BT_4663, two-component 99.1 2.4E-06 8.3E-11 79.7 34.7 292 18-374 175-478 (795)
255 3mbr_X Glutamine cyclotransfer 99.1 4.9E-07 1.7E-11 69.7 24.6 199 13-228 16-223 (243)
256 2ad6_A Methanol dehydrogenase 99.0 9.8E-08 3.4E-12 85.0 23.3 159 28-188 115-345 (571)
257 1k3i_A Galactose oxidase precu 99.0 3E-08 1E-12 90.3 20.1 115 20-136 190-325 (656)
258 2p4o_A Hypothetical protein; p 99.0 4.4E-07 1.5E-11 74.3 25.2 225 16-268 32-274 (306)
259 2ad6_A Methanol dehydrogenase 99.0 2.2E-07 7.4E-12 82.8 24.2 202 29-246 63-342 (571)
260 3v65_B Low-density lipoprotein 99.0 1.8E-06 6.2E-11 73.0 28.3 208 15-246 115-325 (386)
261 1w6s_A Methanol dehydrogenase 99.0 7.8E-07 2.7E-11 79.2 26.8 205 29-247 63-350 (599)
262 3v64_C Agrin; beta propeller, 99.0 6.6E-06 2.3E-10 68.5 31.0 198 15-239 33-234 (349)
263 3v64_C Agrin; beta propeller, 99.0 3.6E-06 1.2E-10 70.1 29.4 206 16-245 73-281 (349)
264 3v9f_A Two-component system se 99.0 5.4E-06 1.8E-10 77.2 33.5 320 16-373 211-565 (781)
265 3v65_B Low-density lipoprotein 99.0 5.3E-06 1.8E-10 70.1 30.1 196 17-239 78-277 (386)
266 2p4o_A Hypothetical protein; p 98.9 1.8E-06 6.1E-11 70.7 25.9 239 59-365 32-277 (306)
267 1flg_A Protein (quinoprotein e 98.9 1.7E-06 5.7E-11 77.2 25.9 161 28-188 117-365 (582)
268 1ijq_A LDL receptor, low-densi 98.9 1.5E-05 5.3E-10 65.4 31.5 179 38-239 10-195 (316)
269 1ijq_A LDL receptor, low-densi 98.9 1.9E-05 6.6E-10 64.8 30.5 207 15-243 29-242 (316)
270 2xbg_A YCF48-like protein; pho 98.9 2.3E-05 8E-10 64.6 32.4 280 15-373 35-319 (327)
271 3p5b_L Low density lipoprotein 98.8 2.6E-05 8.9E-10 66.2 30.4 209 14-244 110-325 (400)
272 1flg_A Protein (quinoprotein e 98.8 1.3E-06 4.3E-11 78.0 22.9 214 30-267 170-544 (582)
273 3p5b_L Low density lipoprotein 98.8 3.3E-05 1.1E-09 65.6 31.6 188 30-239 85-277 (400)
274 2xe4_A Oligopeptidase B; hydro 98.8 4.6E-07 1.6E-11 83.7 20.3 156 17-178 175-354 (751)
275 3v9f_A Two-component system se 98.8 9.2E-05 3.1E-09 69.0 37.6 328 16-373 163-521 (781)
276 4hw6_A Hypothetical protein, I 98.8 8.4E-06 2.9E-10 69.9 26.3 156 17-177 140-303 (433)
277 4hw6_A Hypothetical protein, I 98.8 5E-06 1.7E-10 71.3 24.6 261 60-375 140-432 (433)
278 3tc9_A Hypothetical hydrolase; 98.8 3.9E-06 1.3E-10 72.0 23.9 155 60-239 138-301 (430)
279 3tc9_A Hypothetical hydrolase; 98.8 1.1E-05 3.7E-10 69.2 26.7 155 17-178 138-301 (430)
280 1w6s_A Methanol dehydrogenase 98.8 2.4E-06 8.2E-11 76.1 23.2 210 36-267 180-531 (599)
281 3qqz_A Putative uncharacterize 98.7 2.4E-05 8.2E-10 61.3 24.7 171 54-239 22-204 (255)
282 3m0c_C LDL receptor, low-densi 98.7 7.9E-05 2.7E-09 68.6 31.4 188 30-239 397-589 (791)
283 3sov_A LRP-6, low-density lipo 98.7 7E-05 2.4E-09 61.4 28.2 181 37-239 12-197 (318)
284 3sov_A LRP-6, low-density lipo 98.7 7.4E-05 2.5E-09 61.2 28.4 204 17-244 36-243 (318)
285 1k3i_A Galactose oxidase precu 98.7 2.3E-06 7.9E-11 77.9 20.2 201 18-240 245-498 (656)
286 3kya_A Putative phosphatase; s 98.6 0.00013 4.3E-09 62.9 27.5 156 18-177 141-340 (496)
287 3m0c_C LDL receptor, low-densi 98.6 0.00024 8E-09 65.5 30.9 210 14-245 422-638 (791)
288 3amr_A 3-phytase; beta-propell 98.6 5.7E-05 2E-09 61.5 22.6 188 29-238 41-262 (355)
289 1n7d_A LDL receptor, low-densi 98.5 2.7E-06 9.2E-11 77.6 15.9 183 37-239 385-571 (699)
290 1n7d_A LDL receptor, low-densi 98.5 2.7E-06 9.2E-11 77.6 15.4 208 17-246 407-621 (699)
291 2xe4_A Oligopeptidase B; hydro 98.5 3E-05 1E-09 71.7 21.6 113 105-240 175-305 (751)
292 3s94_A LRP-6, low-density lipo 98.5 0.00066 2.2E-08 61.0 36.6 202 16-241 40-245 (619)
293 2p9w_A MAL S 1 allergenic prot 98.5 9.2E-05 3.1E-09 59.7 21.1 165 12-178 9-215 (334)
294 3kya_A Putative phosphatase; s 98.4 0.00092 3.2E-08 57.7 27.9 158 61-238 141-340 (496)
295 2vpj_A Kelch-like protein 12; 98.3 0.00072 2.4E-08 54.9 24.1 186 28-240 15-232 (301)
296 3amr_A 3-phytase; beta-propell 98.3 0.00033 1.1E-08 57.1 20.5 191 70-323 40-262 (355)
297 2p9w_A MAL S 1 allergenic prot 98.2 0.0014 4.9E-08 52.9 22.7 173 105-325 14-216 (334)
298 2xbg_A YCF48-like protein; pho 98.2 0.0017 5.7E-08 53.5 26.5 190 15-232 79-272 (327)
299 2xn4_A Kelch-like protein 2; s 98.2 0.0018 6E-08 52.7 23.1 185 28-240 16-230 (302)
300 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0039 1.3E-07 56.1 30.9 185 30-239 8-197 (628)
301 3ii7_A Kelch-like protein 7; p 98.1 0.0023 7.7E-08 52.1 23.4 184 29-240 13-226 (306)
302 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0053 1.8E-07 55.3 38.7 200 16-241 37-239 (628)
303 3s94_A LRP-6, low-density lipo 98.1 0.0059 2E-07 54.9 34.6 164 16-185 84-250 (619)
304 1zgk_A Kelch-like ECH-associat 98.0 0.004 1.4E-07 50.7 22.2 185 28-240 25-241 (308)
305 2ism_A Putative oxidoreductase 98.0 0.0049 1.7E-07 51.2 26.8 144 15-164 30-219 (352)
306 2ism_A Putative oxidoreductase 98.0 0.0054 1.9E-07 51.0 24.8 103 59-166 31-153 (352)
307 2xn4_A Kelch-like protein 2; s 98.0 0.0048 1.6E-07 50.1 22.6 104 71-181 17-136 (302)
308 2vpj_A Kelch-like protein 12; 97.9 0.0049 1.7E-07 49.9 23.2 145 70-240 15-185 (301)
309 3ei3_A DNA damage-binding prot 97.9 0.018 6.3E-07 55.6 34.3 178 15-212 553-746 (1158)
310 3a9g_A Putative uncharacterize 97.9 0.0072 2.4E-07 50.3 25.4 103 59-166 29-153 (354)
311 3ei3_A DNA damage-binding prot 97.9 0.022 7.7E-07 55.1 28.6 146 115-324 844-999 (1158)
312 3a9g_A Putative uncharacterize 97.9 0.0081 2.8E-07 49.9 27.3 145 15-164 28-214 (354)
313 2xzh_A Clathrin heavy chain 1; 97.9 0.0067 2.3E-07 48.7 29.4 201 21-243 72-294 (365)
314 3ii7_A Kelch-like protein 7; p 97.8 0.0096 3.3E-07 48.3 24.1 104 71-181 13-130 (306)
315 4asc_A Kelch repeat and BTB do 97.8 0.011 3.8E-07 48.2 22.4 183 30-240 7-222 (315)
316 2xzh_A Clathrin heavy chain 1; 97.8 0.01 3.5E-07 47.7 29.8 233 36-328 47-294 (365)
317 1bpo_A Protein (clathrin); cla 97.7 0.019 6.7E-07 48.1 31.6 202 20-243 70-293 (494)
318 3sre_A PON1, serum paraoxonase 97.7 0.018 6.1E-07 47.6 25.4 157 17-178 51-252 (355)
319 1zgk_A Kelch-like ECH-associat 97.6 0.017 5.7E-07 47.0 21.7 105 69-180 24-148 (308)
320 1bpo_A Protein (clathrin); cla 97.6 0.022 7.5E-07 47.8 29.1 234 36-328 46-293 (494)
321 2g8s_A Glucose/sorbosone dehyd 97.6 0.024 8.1E-07 47.1 24.2 140 16-159 18-210 (353)
322 2uvk_A YJHT; unknown function, 97.6 0.0099 3.4E-07 49.5 18.4 66 69-136 19-97 (357)
323 4asc_A Kelch repeat and BTB do 97.5 0.024 8.3E-07 46.2 21.8 100 73-180 8-128 (315)
324 2be1_A Serine/threonine-protei 97.5 0.021 7.2E-07 46.7 18.7 201 29-244 11-236 (339)
325 3das_A Putative oxidoreductase 97.5 0.028 9.7E-07 46.2 29.3 149 9-159 25-214 (347)
326 3pbp_A Nucleoporin NUP82; beta 97.5 0.033 1.1E-06 46.7 20.0 160 67-238 29-211 (452)
327 3pbp_A Nucleoporin NUP82; beta 97.4 0.023 7.9E-07 47.6 18.0 159 168-371 40-207 (452)
328 3sre_A PON1, serum paraoxonase 97.4 0.038 1.3E-06 45.6 23.3 157 60-239 51-252 (355)
329 2woz_A Kelch repeat and BTB do 97.4 0.04 1.4E-06 45.0 24.6 184 29-240 17-232 (318)
330 2g8s_A Glucose/sorbosone dehyd 97.4 0.048 1.6E-06 45.3 28.2 106 59-166 18-148 (353)
331 2woz_A Kelch repeat and BTB do 97.1 0.077 2.6E-06 43.2 21.3 95 81-181 25-139 (318)
332 1xi4_A Clathrin heavy chain; a 97.1 0.17 5.8E-06 49.4 21.9 132 37-179 47-189 (1630)
333 1tl2_A L10, protein (tachylect 97.1 0.033 1.1E-06 42.0 13.9 146 16-171 41-203 (236)
334 3das_A Putative oxidoreductase 97.1 0.096 3.3E-06 43.1 28.2 108 57-166 30-158 (347)
335 1xi4_A Clathrin heavy chain; a 97.0 0.16 5.6E-06 49.5 20.9 201 22-244 72-294 (1630)
336 2uvk_A YJHT; unknown function, 97.0 0.11 3.6E-06 43.2 18.3 93 28-124 20-128 (357)
337 1tl2_A L10, protein (tachylect 97.0 0.073 2.5E-06 40.2 14.9 107 104-233 41-157 (236)
338 2be1_A Serine/threonine-protei 96.8 0.13 4.5E-06 42.0 16.4 113 71-188 11-140 (339)
339 1cru_A Protein (soluble quinop 96.4 0.4 1.4E-05 41.3 20.2 106 59-166 27-162 (454)
340 2zwa_A Leucine carboxyl methyl 96.3 0.63 2.1E-05 42.6 19.3 150 28-180 398-579 (695)
341 3ott_A Two-component system se 95.9 1.1 3.8E-05 41.5 35.4 319 17-373 192-542 (758)
342 2zwa_A Leucine carboxyl methyl 95.7 0.98 3.4E-05 41.4 17.9 109 113-240 396-523 (695)
343 3sbq_A Nitrous-oxide reductase 95.6 0.44 1.5E-05 41.5 14.0 107 105-228 324-454 (638)
344 3uc1_A DNA gyrase subunit A; D 95.5 0.82 2.8E-05 37.3 25.5 197 28-239 3-228 (327)
345 3s25_A Hypothetical 7-bladed b 95.1 1.1 3.6E-05 36.2 21.2 138 24-181 22-179 (302)
346 3ott_A Two-component system se 95.0 2.3 7.8E-05 39.4 35.8 193 16-241 63-262 (758)
347 3sbq_A Nitrous-oxide reductase 94.9 1.8 6.3E-05 37.9 20.5 94 73-167 73-196 (638)
348 1cru_A Protein (soluble quinop 94.8 1.7 6E-05 37.3 31.1 112 10-122 21-162 (454)
349 3b7f_A Glycosyl hydrolase, BNR 93.4 3.1 0.0001 34.9 23.7 156 15-174 54-258 (394)
350 3s25_A Hypothetical 7-bladed b 93.1 2.9 9.8E-05 33.6 21.9 141 21-180 58-218 (302)
351 3qhy_B Beta-lactamase inhibito 93.0 2.8 9.6E-05 33.3 20.7 183 17-239 25-207 (282)
352 3b7f_A Glycosyl hydrolase, BNR 92.7 3.9 0.00014 34.2 29.1 193 29-230 23-254 (394)
353 2wg3_C Hedgehog-interacting pr 91.0 7.1 0.00024 33.6 27.6 107 16-123 14-158 (463)
354 2wg3_C Hedgehog-interacting pr 90.8 7.3 0.00025 33.5 15.4 108 59-167 14-158 (463)
355 3qhy_B Beta-lactamase inhibito 90.3 5.8 0.0002 31.5 23.5 143 60-239 25-168 (282)
356 4hvt_A Ritya.17583.B, post-pro 89.7 12 0.00041 34.3 18.6 194 20-240 133-382 (711)
357 3q6k_A 43.2 kDa salivary prote 89.0 9.1 0.00031 31.9 17.1 71 169-246 123-197 (381)
358 3no0_A DNA gyrase subunit A; D 88.7 7.6 0.00026 30.7 22.6 157 58-239 23-196 (276)
359 4gq2_M Nucleoporin NUP120; bet 88.1 16 0.00054 35.0 14.8 36 59-94 236-271 (950)
360 3uc1_A DNA gyrase subunit A; D 87.9 9.8 0.00034 30.9 21.9 160 15-178 94-279 (327)
361 4gq2_M Nucleoporin NUP120; bet 87.5 18 0.00061 34.6 14.8 35 292-329 237-271 (950)
362 1zi0_A DNA gyrase subunit A; b 83.1 17 0.00057 29.3 28.2 189 28-239 3-226 (307)
363 3q6k_A 43.2 kDa salivary prote 83.0 19 0.00066 30.0 21.9 136 39-178 124-306 (381)
364 3no0_A DNA gyrase subunit A; D 82.9 16 0.00054 28.9 21.8 205 8-239 13-246 (276)
365 1suu_A DNA gyrase subunit A; t 76.6 28 0.00096 28.0 25.8 201 68-325 6-232 (312)
366 1suu_A DNA gyrase subunit A; t 76.5 28 0.00096 28.0 29.2 191 25-239 6-231 (312)
367 3zwu_A Alkaline phosphatase PH 76.5 11 0.00037 33.6 8.2 58 107-164 479-548 (592)
368 3l6v_A GYRA, DNA gyrase subuni 76.1 32 0.0011 28.5 28.2 149 23-177 3-179 (370)
369 1wp5_A Topoisomerase IV; broke 75.3 31 0.0011 27.9 28.6 191 25-239 3-225 (323)
370 1wp5_A Topoisomerase IV; broke 73.6 35 0.0012 27.7 24.2 152 68-239 3-174 (323)
371 3f7f_A Nucleoporin NUP120; nuc 72.4 33 0.0011 31.3 10.2 37 149-188 224-260 (729)
372 3l6v_A GYRA, DNA gyrase subuni 68.3 50 0.0017 27.4 24.5 154 66-239 3-180 (370)
373 4fhn_B Nucleoporin NUP120; pro 68.2 32 0.0011 33.7 10.1 38 105-142 239-276 (1139)
374 4a9v_A PHOX; hydrolase, beta-p 68.1 41 0.0014 29.8 9.6 65 105-169 477-553 (592)
375 1sqj_A OXG-RCBH, oligoxylogluc 67.0 83 0.0028 29.3 26.0 152 15-168 14-190 (789)
376 1zvt_A Topoisomerase IV subuni 65.9 45 0.0015 25.9 14.7 145 29-178 3-163 (256)
377 1zi0_A DNA gyrase subunit A; b 65.8 50 0.0017 26.4 25.8 201 68-325 1-227 (307)
378 3kci_A Probable E3 ubiquitin-p 65.4 59 0.002 27.1 28.6 152 70-239 62-241 (389)
379 4fhn_B Nucleoporin NUP120; pro 64.7 6.5 0.00022 38.4 4.6 38 17-55 239-276 (1139)
380 3zwu_A Alkaline phosphatase PH 62.9 37 0.0013 30.3 8.6 57 19-76 479-548 (592)
381 3f7f_A Nucleoporin NUP120; nuc 55.7 23 0.0008 32.3 6.1 36 105-142 223-258 (729)
382 4a9v_A PHOX; hydrolase, beta-p 55.7 79 0.0027 28.1 9.2 62 148-228 477-550 (592)
383 2cn3_A Xyloglucanase, beta-1,4 45.1 1.9E+02 0.0064 26.7 28.3 107 17-124 24-153 (737)
384 2cn3_A Xyloglucanase, beta-1,4 39.8 2.3E+02 0.0078 26.1 25.0 108 60-168 24-153 (737)
385 1sqj_A OXG-RCBH, oligoxylogluc 37.3 2.6E+02 0.0089 26.1 23.8 157 58-229 14-190 (789)
386 3kci_A Probable E3 ubiquitin-p 33.1 2.1E+02 0.0071 23.7 27.7 189 30-239 64-293 (389)
387 4hvt_A Ritya.17583.B, post-pro 25.8 3.9E+02 0.013 24.5 22.8 115 61-177 131-277 (711)
388 3al9_A Plexin-A2; beta-propell 25.7 1.9E+02 0.0064 25.5 6.9 69 149-234 402-476 (539)
389 3al9_A Plexin-A2; beta-propell 25.3 2.2E+02 0.0076 25.0 7.3 69 60-129 401-476 (539)
390 3a0f_A Xyloglucanase; beta-pro 25.2 4.1E+02 0.014 24.6 18.4 155 16-173 21-208 (763)
391 4h3o_A Lectin; cadmium, plant 25.0 1.4E+02 0.0048 19.1 10.5 46 63-121 54-99 (105)
392 1q47_A Semaphorin 3A; beta pro 24.0 2.6E+02 0.0089 24.3 7.4 68 17-84 405-487 (495)
393 1q47_A Semaphorin 3A; beta pro 24.0 2.5E+02 0.0085 24.4 7.3 69 60-129 405-487 (495)
394 4gz8_A Semaphorin-3A; multi-do 23.9 2E+02 0.0068 26.2 6.8 57 72-129 431-495 (667)
395 1zvu_A Topoisomerase IV subuni 22.8 4.5E+02 0.015 24.2 14.0 146 25-178 470-633 (716)
396 3ol2_B Plexin-B1; beta-propell 22.6 3.2E+02 0.011 24.0 7.7 68 149-234 389-461 (528)
397 1olz_A Semaphorin 4D; developm 21.2 3E+02 0.01 25.1 7.4 58 72-129 417-477 (663)
398 4gz8_A Semaphorin-3A; multi-do 20.3 4.1E+02 0.014 24.2 8.1 28 289-319 468-495 (667)
399 3mez_B Mannose-specific lectin 20.2 1.9E+02 0.0064 18.8 10.5 13 224-236 93-105 (113)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-54 Score=373.95 Aligned_cols=296 Identities=16% Similarity=0.212 Sum_probs=266.7
Q ss_pred CeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEEC
Q 017194 8 PRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDV 87 (375)
Q Consensus 8 ~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~ 87 (375)
...+.+|.++|++++|+|+ +.+|++|+.||+|+|||+.+++....+.+|...|.+++|+|++++|++|+.|++|++||+
T Consensus 101 ~~~l~gh~~~V~~~~~~p~-~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp SCEEECCSSCEEEEEECSS-SSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred eEeecccCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence 5678999999999999999 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeec
Q 017194 88 HMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGL 167 (375)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 167 (375)
.+. ..+..+.+|...|.+++|+|++++|++|+.|+.|++||+++++.+..+. +|...|.++.++|++. ++++++.
T Consensus 180 ~~~---~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~g~-~l~s~s~ 254 (410)
T 1vyh_C 180 QGF---ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGT-LIASCSN 254 (410)
T ss_dssp TSS---CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTSS-EEEEEET
T ss_pred CCC---ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe-CCCccEEEEEECCCCC-EEEEEcC
Confidence 865 3455667789999999999999999999999999999999999999999 9999999999999998 8999999
Q ss_pred CCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccc--------------cCCCCEEEEEecCCcEE
Q 017194 168 DSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADML--------------DKTNKICVVAKGDGVVD 233 (375)
Q Consensus 168 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--------------~~~~~~l~~~~~dg~i~ 233 (375)
|+.|++||+++++....+.. |...|.+++|+|...+ ...+.+|++|+.|+.|+
T Consensus 255 D~~v~vwd~~~~~~~~~~~~-------------h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~ 321 (410)
T 1vyh_C 255 DQTVRVWVVATKECKAELRE-------------HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK 321 (410)
T ss_dssp TSCEEEEETTTCCEEEEECC-------------CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEE
T ss_pred CCeEEEEECCCCceeeEecC-------------CCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEE
Confidence 99999999999888777753 4678999999984110 01267899999999999
Q ss_pred EEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecC
Q 017194 234 VINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGN 313 (375)
Q Consensus 234 i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~ 313 (375)
+||++++ .++..+.+|...|.+++|+ |++++|++|+.
T Consensus 322 iwd~~~~----------------------------------------~~~~~~~~h~~~v~~v~~~---~~g~~l~s~s~ 358 (410)
T 1vyh_C 322 MWDVSTG----------------------------------------MCLMTLVGHDNWVRGVLFH---SGGKFILSCAD 358 (410)
T ss_dssp EEETTTT----------------------------------------EEEEEEECCSSCEEEEEEC---SSSSCEEEEET
T ss_pred EEECCCC----------------------------------------ceEEEEECCCCcEEEEEEc---CCCCEEEEEeC
Confidence 9999874 4455778999999999999 99999999999
Q ss_pred CCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 314 DKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 314 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
||.|++||+.++ +.+..+.+|...|++++|+| ++.+|++|+.||.|++|++.
T Consensus 359 D~~i~vwd~~~~---------~~~~~~~~h~~~v~~l~~~~-~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 359 DKTLRVWDYKNK---------RCMKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp TTEEEEECCTTS---------CCCEEEECCSSCEEEEEECS-SSSCEEEEETTSEEEEEC--
T ss_pred CCeEEEEECCCC---------ceEEEEcCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEeCC
Confidence 999999999987 66677889999999999999 99999999999999999863
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.6e-53 Score=350.34 Aligned_cols=296 Identities=17% Similarity=0.239 Sum_probs=259.2
Q ss_pred CCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEE
Q 017194 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKS 84 (375)
Q Consensus 5 ~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~i 84 (375)
.+..++|++|.+.|++++|+|+ +++|++|+.||+|++||+++++.+..+..|..+|.+++|+|++++|++++.|+.|++
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~-~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~v 81 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPT-EPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRV 81 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred ceeEEeecCCCCceEEEEECCC-CCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEE
Confidence 3456789999999999999999 899999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCc-eeeeeEecCcccceeEEEEeeCCCcEEE
Q 017194 85 FDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQH-CLYKSLRAGHSSICSSVQFIPWKPWEVI 163 (375)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 163 (375)
||+.+++ .+..+.+|...|.+++|+|++++|++|+.|++|++||++++ .....+. +|...|.+++|+|.+..+|+
T Consensus 82 wd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~ 157 (304)
T 2ynn_A 82 FNYNTGE---KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE-GHEHFVMCVAFNPKDPSTFA 157 (304)
T ss_dssp EETTTCC---EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEEC-CCCSCEEEEEECTTCTTEEE
T ss_pred EECCCCc---EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhc-ccCCcEEEEEECCCCCCEEE
Confidence 9999764 34556678999999999999999999999999999999877 4556777 99999999999995444899
Q ss_pred EeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCccee
Q 017194 164 SGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNI 243 (375)
Q Consensus 164 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 243 (375)
+|+.|++|++||++++.....+..+ +...+..+.+.| .+++.+|++++.|+.|++||++++
T Consensus 158 sgs~D~~v~iwd~~~~~~~~~~~~~------------~~~~v~~~~~~~----~~~~~~l~s~s~D~~i~iWd~~~~--- 218 (304)
T 2ynn_A 158 SGCLDRTVKVWSLGQSTPNFTLTTG------------QERGVNYVDYYP----LPDKPYMITASDDLTIKIWDYQTK--- 218 (304)
T ss_dssp EEETTSEEEEEETTCSSCSEEEECC------------CTTCEEEEEECC----STTCCEEEEEETTSEEEEEETTTT---
T ss_pred EEeCCCeEEEEECCCCCccceeccC------------CcCcEEEEEEEE----cCCCCEEEEEcCCCeEEEEeCCCC---
Confidence 9999999999999988887777654 456788999987 346789999999999999999874
Q ss_pred ecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCC
Q 017194 244 SRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCS 323 (375)
Q Consensus 244 ~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~ 323 (375)
+++..+.+|...|.+++|+ |++++|++|+.||.|++||+.
T Consensus 219 -------------------------------------~~~~~~~~h~~~v~~~~~~---p~~~~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 219 -------------------------------------SCVATLEGHMSNVSFAVFH---PTLPIIISGSEDGTLKIWNSS 258 (304)
T ss_dssp -------------------------------------EEEEEEECCSSCEEEEEEC---SSSSEEEEEETTSCEEEEETT
T ss_pred -------------------------------------ccceeeCCCCCCEEEEEEC---CCCCEEEEEcCCCeEEEEECC
Confidence 4556788999999999999 999999999999999999999
Q ss_pred CceeeeecchhhhhhhhcccccceeeeeecCCCCCc-EEEeeCCCeEEEEec
Q 017194 324 RFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESEN-LVVCDTSKVVKVYSI 374 (375)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-l~s~~~dg~v~iw~~ 374 (375)
++ +++..+..|...+.+++++|.+++. +++|+.| .+.+|++
T Consensus 259 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~ 300 (304)
T 2ynn_A 259 TY---------KVEKTLNVGLERSWCIATHPTGRKNYIASGFDN-GFTVLSL 300 (304)
T ss_dssp TC---------CEEEEECCSSSSEEEEEECTTCGGGCEEEEETT-EEEEEEC
T ss_pred CC---------ceeeeccCCCccEEEEEECCCCCceEEEEecCC-ceEEEEe
Confidence 98 5666777889999999999944444 6666555 4777765
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=9e-54 Score=356.03 Aligned_cols=292 Identities=16% Similarity=0.218 Sum_probs=259.8
Q ss_pred CCeeeecCCCceeEEEEecC---CCCEEEEeCCCCcEEEEecccCce--eeEeeecCccEEEEEEeCCCCeEEEEcCCCe
Q 017194 7 KPRRLRGHKATATCCIASRD---RPGFVASSGEDGCICWFDLRSKDV--QLVTDVGNGPVTSLCFKSGNEDIIYVSSGKE 81 (375)
Q Consensus 7 ~~~~l~~h~~~i~~~~~~~~---~~~~l~s~~~d~~i~iw~~~~~~~--~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~ 81 (375)
..+.+++|.++|++++|+|+ ++.+|+||+.|++|+||++.+++. ...+.+|...|.+++|++++..+++++.|++
T Consensus 24 ~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~ 103 (321)
T 3ow8_A 24 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAH 103 (321)
T ss_dssp EEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSE
T ss_pred eeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCc
Confidence 34667899999999999985 257899999999999999987654 4567899999999999999999999999999
Q ss_pred EEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcE
Q 017194 82 VKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWE 161 (375)
Q Consensus 82 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 161 (375)
|++||+.+++.. ..+..|...+.+++|+|++++|++++.||.|++||+++++....+. .|...+.+++|+|+++ +
T Consensus 104 i~lWd~~~~~~~---~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~-~~~~~v~~~~~spdg~-~ 178 (321)
T 3ow8_A 104 IRLWDLENGKQI---KSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD-TRGKFILSIAYSPDGK-Y 178 (321)
T ss_dssp EEEEETTTTEEE---EEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEE-CSSSCEEEEEECTTSS-E
T ss_pred EEEEECCCCCEE---EEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEec-CCCceEEEEEECCCCC-E
Confidence 999999976543 4445567889999999999999999999999999999999988888 8999999999999998 7
Q ss_pred EEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcc
Q 017194 162 VISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESEL 241 (375)
Q Consensus 162 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 241 (375)
|++++.|+.|++||+++++.+..+.. |...|.+++|+| ++++|++++.||.|++||+++.
T Consensus 179 lasg~~dg~i~iwd~~~~~~~~~~~~-------------h~~~v~~l~~sp------d~~~l~s~s~dg~i~iwd~~~~- 238 (321)
T 3ow8_A 179 LASGAIDGIINIFDIATGKLLHTLEG-------------HAMPIRSLTFSP------DSQLLVTASDDGYIKIYDVQHA- 238 (321)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECC-------------CSSCCCEEEECT------TSCEEEEECTTSCEEEEETTTC-
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEcc-------------cCCceeEEEEcC------CCCEEEEEcCCCeEEEEECCCc-
Confidence 99999999999999999988887763 467899999999 8999999999999999999864
Q ss_pred eeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEe
Q 017194 242 NISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWD 321 (375)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd 321 (375)
.....+.+|...|.+++|+ |++++|++++.|+.|++||
T Consensus 239 ---------------------------------------~~~~~~~~h~~~v~~~~~s---p~~~~l~s~s~D~~v~iwd 276 (321)
T 3ow8_A 239 ---------------------------------------NLAGTLSGHASWVLNVAFC---PDDTHFVSSSSDKSVKVWD 276 (321)
T ss_dssp ---------------------------------------CEEEEECCCSSCEEEEEEC---TTSSEEEEEETTSCEEEEE
T ss_pred ---------------------------------------ceeEEEcCCCCceEEEEEC---CCCCEEEEEeCCCcEEEEe
Confidence 3345778999999999999 9999999999999999999
Q ss_pred CCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 322 CSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
+.++ +.+..+.+|...|.+++|+| ++++|++++.||.|++||++
T Consensus 277 ~~~~---------~~~~~~~~h~~~v~~v~~s~-~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 277 VGTR---------TCVHTFFDHQDQVWGVKYNG-NGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp TTTT---------EEEEEECCCSSCEEEEEECT-TSSEEEEEETTCCEEEEECC
T ss_pred CCCC---------EEEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEeCC
Confidence 9998 55667788999999999999 99999999999999999975
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4e-53 Score=355.65 Aligned_cols=295 Identities=15% Similarity=0.214 Sum_probs=261.8
Q ss_pred CCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEE
Q 017194 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKS 84 (375)
Q Consensus 5 ~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~i 84 (375)
....++|++|.++|++++|+|+ +++|++|+.||+|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.+++
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d-~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~i 123 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTD-SRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI 123 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTT-SSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred chhheeecCCCCceEEEEECCC-CCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEE
Confidence 3445689999999999999999 899999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCCc-ccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEE
Q 017194 85 FDVHMPAS-WRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVI 163 (375)
Q Consensus 85 wd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 163 (375)
|++.+... ......+.+|...|.++.|++++ .+++++.|+.|++||+++++.+..+. +|...|.+++|+|++. +++
T Consensus 124 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~~~-~l~ 200 (340)
T 1got_B 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFT-GHTGDVMSLSLAPDTR-LFV 200 (340)
T ss_dssp EETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSS-EEE
T ss_pred EECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEc-CCCCceEEEEECCCCC-EEE
Confidence 99986532 23445667889999999999887 48899999999999999999999999 9999999999999998 899
Q ss_pred EeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCccee
Q 017194 164 SGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNI 243 (375)
Q Consensus 164 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 243 (375)
+|+.|+.|++||++++++...+.. |...|.+++|+| ++++|++|+.||.|++||+++....
T Consensus 201 sg~~d~~v~~wd~~~~~~~~~~~~-------------h~~~v~~v~~~p------~~~~l~s~s~d~~v~iwd~~~~~~~ 261 (340)
T 1got_B 201 SGACDASAKLWDVREGMCRQTFTG-------------HESDINAICFFP------NGNAFATGSDDATCRLFDLRADQEL 261 (340)
T ss_dssp EEETTSCEEEEETTTCSEEEEECC-------------CSSCEEEEEECT------TSSEEEEEETTSCEEEEETTTTEEE
T ss_pred EEeCCCcEEEEECCCCeeEEEEcC-------------CcCCEEEEEEcC------CCCEEEEEcCCCcEEEEECCCCcEE
Confidence 999999999999999988877763 467899999999 7999999999999999999874221
Q ss_pred ecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCC
Q 017194 244 SRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCS 323 (375)
Q Consensus 244 ~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~ 323 (375)
. ......+...|.+++|+ |+|++|++|+.||.|++||+.
T Consensus 262 ~--------------------------------------~~~~~~~~~~v~~~~~s---~~g~~l~~g~~d~~i~vwd~~ 300 (340)
T 1got_B 262 M--------------------------------------TYSHDNIICGITSVSFS---KSGRLLLAGYDDFNCNVWDAL 300 (340)
T ss_dssp E--------------------------------------EECCTTCCSCEEEEEEC---TTSSEEEEEETTSEEEEEETT
T ss_pred E--------------------------------------EEccCCcccceEEEEEC---CCCCEEEEECCCCeEEEEEcc
Confidence 1 11122344579999999 999999999999999999999
Q ss_pred CceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEe
Q 017194 324 RFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYS 373 (375)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~ 373 (375)
+. +.+..+.+|...|.+++|+| ++++|++|+.||.|++||
T Consensus 301 ~~---------~~~~~~~~h~~~v~~~~~s~-dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 301 KA---------DRAGVLAGHDNRVSCLGVTD-DGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TC---------CEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEEC
T ss_pred cC---------cEeeEeecCCCcEEEEEEcC-CCCEEEEEcCCccEEecC
Confidence 87 55567789999999999999 999999999999999997
No 5
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.2e-53 Score=381.12 Aligned_cols=348 Identities=15% Similarity=0.139 Sum_probs=274.4
Q ss_pred CCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEE
Q 017194 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKS 84 (375)
Q Consensus 5 ~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~i 84 (375)
+.....+.+|.+.|++++|+|++...|++|+.|++|++||..+++....+.+|...|.+++|+|++++|++++.|++|++
T Consensus 137 ~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~l 216 (611)
T 1nr0_A 137 GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVL 216 (611)
T ss_dssp CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEE
Confidence 45567789999999999999994346999999999999999999989999999999999999999999999999999999
Q ss_pred EECCCCCccccccc----ccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeee---------------------
Q 017194 85 FDVHMPASWRPLES----YNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYK--------------------- 139 (375)
Q Consensus 85 wd~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--------------------- 139 (375)
||+.+++....+.. ..+|...|.+++|+|++++|++++.|++|++||+++++.+.
T Consensus 217 wd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (611)
T 1nr0_A 217 YNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA 296 (611)
T ss_dssp EETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSC
T ss_pred EECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCE
Confidence 99987765443321 12689999999999999999999999999999998765543
Q ss_pred ----------------------eEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCC------
Q 017194 140 ----------------------SLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPE------ 191 (375)
Q Consensus 140 ----------------------~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~------ 191 (375)
.+. +|...|++++|+|+++ +|++++.|++|++||+.+++....+...+..
T Consensus 297 l~s~s~d~~i~~~~~~~~~~~~~~~-gh~~~v~~l~~spdg~-~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~ 374 (611)
T 1nr0_A 297 LVSISANGFINFVNPELGSIDQVRY-GHNKAITALSSSADGK-TLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 374 (611)
T ss_dssp EEEEETTCCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEE
T ss_pred EEEEeCCCcEEEEeCCCCCcceEEc-CCCCCEEEEEEeCCCC-EEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEE
Confidence 234 7889999999999998 7999999999999999876543321000000
Q ss_pred -------------------------CCC------------------CC--------------------CcccCCCceeEE
Q 017194 192 -------------------------NNG------------------NA--------------------GQCYNPAFVHAI 208 (375)
Q Consensus 192 -------------------------~~~------------------~~--------------------~~~~~~~~v~~~ 208 (375)
... .. ....+...+.++
T Consensus 375 ~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~v 454 (611)
T 1nr0_A 375 TTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCV 454 (611)
T ss_dssp ECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEE
T ss_pred ECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEE
Confidence 000 00 000123456788
Q ss_pred eecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeee------eeecCCcceeEe
Q 017194 209 AIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEME------ILDQSGGKRLHL 282 (375)
Q Consensus 209 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~------~~~~~~~~~~~~ 282 (375)
+|+| ++++|++|+.|+.|++||+.+..............+.+++|+|||+++++.+ .++.... .++
T Consensus 455 a~sp------dg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~--~~~ 526 (611)
T 1nr0_A 455 ALSN------DKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANN--FEL 526 (611)
T ss_dssp EECT------TSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGT--TEE
T ss_pred EEeC------CCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCC--Cce
Confidence 8888 8999999999999999999875432211233456788999999999998632 2332221 222
Q ss_pred eee--ecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhh-hhhccc-ccceeeeeecCCCCC
Q 017194 283 DYS--VGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLL-IKNINL-NKKVNWLCTTPTESE 358 (375)
Q Consensus 283 ~~~--~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~-~~~v~~~~~~~~~~~ 358 (375)
... +.+|...|.+++|+ |||++|++|+.|++|++||+..+. ... ..+.+| ...|.+++|+| +++
T Consensus 527 ~~~~~~~~H~~~V~~v~fs---pdg~~lasgs~D~~v~lW~~~~~~--------~~~~~~~~~h~~~~v~~v~fs~-d~~ 594 (611)
T 1nr0_A 527 AHTNSWTFHTAKVACVSWS---PDNVRLATGSLDNSVIVWNMNKPS--------DHPIIIKGAHAMSSVNSVIWLN-ETT 594 (611)
T ss_dssp SCCCCCCCCSSCEEEEEEC---TTSSEEEEEETTSCEEEEETTCTT--------SCCEEETTSSTTSCEEEEEEEE-TTE
T ss_pred eeeeeeeecccceeEEEEC---CCCCEEEEEECCCcEEEEECCCcc--------cccchhhccCcccCeeEEEEcC-CCE
Confidence 222 34599999999999 999999999999999999998863 122 456688 89999999999 887
Q ss_pred cEEEeeCCCeEEEEecC
Q 017194 359 NLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 359 ~l~s~~~dg~v~iw~~~ 375 (375)
|++++.|++|++|+++
T Consensus 595 -l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 595 -IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp -EEEEETTSCEEEEECC
T ss_pred -EEEecCCCCEEEEecc
Confidence 9999999999999974
No 6
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.5e-52 Score=350.22 Aligned_cols=295 Identities=17% Similarity=0.263 Sum_probs=260.4
Q ss_pred CCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEE
Q 017194 6 AKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSF 85 (375)
Q Consensus 6 ~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iw 85 (375)
+..++|++|.++|++++|+|+ +++|+||+.||+|++||..+++....+..|...|.+++|+|++.++++++.|+.+++|
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d-~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~ 133 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKD-KRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVY 133 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCC-CCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEE
Confidence 456789999999999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCCc---ccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeC--CCc
Q 017194 86 DVHMPAS---WRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPW--KPW 160 (375)
Q Consensus 86 d~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~ 160 (375)
++..... ......+..|...|.+++|+|++..|++++.|++|++||+++++.+..+. +|...|.+++|+|+ +.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~g~- 211 (354)
T 2pbi_B 134 PLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH-GHGADVLCLDLAPSETGN- 211 (354)
T ss_dssp ECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECCCSSCC-
T ss_pred EEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc-CCCCCeEEEEEEeCCCCC-
Confidence 9875321 23344556789999999999999999999999999999999999999999 99999999999885 45
Q ss_pred EEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCc
Q 017194 161 EVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESE 240 (375)
Q Consensus 161 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 240 (375)
+|++|+.||.|++||+++++++..+.. |...|.+++|+| ++.+|++++.|+.|++||+++.
T Consensus 212 ~l~sgs~Dg~v~~wd~~~~~~~~~~~~-------------h~~~v~~v~~~p------~~~~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 212 TFVSGGCDKKAMVWDMRSGQCVQAFET-------------HESDVNSVRYYP------SGDAFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECC-------------CSSCEEEEEECT------TSSEEEEEETTSCEEEEETTTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecC-------------CCCCeEEEEEeC------CCCEEEEEeCCCeEEEEECCCC
Confidence 899999999999999999998887763 468899999999 7999999999999999999864
Q ss_pred ceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEE
Q 017194 241 LNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 320 (375)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iw 320 (375)
... .......+...+.+++|+ |++++|++|+.|+.|++|
T Consensus 273 ~~~--------------------------------------~~~~~~~~~~~~~~~~~s---~~g~~l~~g~~d~~i~vw 311 (354)
T 2pbi_B 273 REV--------------------------------------AIYSKESIIFGASSVDFS---LSGRLLFAGYNDYTINVW 311 (354)
T ss_dssp EEE--------------------------------------EEECCTTCCSCEEEEEEC---TTSSEEEEEETTSCEEEE
T ss_pred cEE--------------------------------------EEEcCCCcccceeEEEEe---CCCCEEEEEECCCcEEEE
Confidence 211 111122334578999999 999999999999999999
Q ss_pred eCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEe
Q 017194 321 DCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYS 373 (375)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~ 373 (375)
|+.++ ..+..+.+|...|.+++|+| ++++|++++.||.|++|+
T Consensus 312 d~~~~---------~~~~~l~~h~~~v~~l~~sp-dg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 312 DVLKG---------SRVSILFGHENRVSTLRVSP-DGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ETTTC---------SEEEEECCCSSCEEEEEECT-TSSCEEEEETTSEEEEEC
T ss_pred ECCCC---------ceEEEEECCCCcEEEEEECC-CCCEEEEEcCCCCEEecC
Confidence 99887 45566789999999999999 999999999999999996
No 7
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.4e-52 Score=354.07 Aligned_cols=293 Identities=16% Similarity=0.200 Sum_probs=242.2
Q ss_pred eecCCCceeEEEEecCCCCEEEEeCC------CCcEEEEecccCce----eeEeeecCccEEEEEEeCCCCeEEEEcCCC
Q 017194 11 LRGHKATATCCIASRDRPGFVASSGE------DGCICWFDLRSKDV----QLVTDVGNGPVTSLCFKSGNEDIIYVSSGK 80 (375)
Q Consensus 11 l~~h~~~i~~~~~~~~~~~~l~s~~~------d~~i~iw~~~~~~~----~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~ 80 (375)
...|++.|++++|+|| |++||+|+. |+.|++|+..++.. ......|...|.+++|+|++. +++++.||
T Consensus 38 p~~H~~~V~~v~fSpD-G~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg 115 (357)
T 4g56_B 38 PACMEVQIGAVRYRRD-GALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSG 115 (357)
T ss_dssp --CCCSEEEEEEECSS-SCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTS
T ss_pred cccccCCEEEEEECCC-CCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCC
Confidence 4569999999999999 899999997 77899999877654 334456889999999999986 55678899
Q ss_pred eEEEEECCCCCcccccc-cccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCC
Q 017194 81 EVKSFDVHMPASWRPLE-SYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKP 159 (375)
Q Consensus 81 ~i~iwd~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 159 (375)
+|++||+.+++...... ...+|...|.+++|+|++++|++++.|+.|++||+++++.+..+. +|...|++++|+|+++
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~-~h~~~v~~v~~s~~~~ 194 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYN-AHSSEVNCVAACPGKD 194 (357)
T ss_dssp CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTCS
T ss_pred EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc-CCCCCEEEEEEccCCC
Confidence 99999998765433322 344788999999999999999999999999999999999999999 9999999999999987
Q ss_pred cEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCC
Q 017194 160 WEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIES 239 (375)
Q Consensus 160 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 239 (375)
.++++++.|+.|++||++++++...+.... +...+.+++|+|. ++.+|++|+.|+.|++||+++
T Consensus 195 ~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~-----------~~~~v~~v~~sp~-----~~~~la~g~~d~~i~~wd~~~ 258 (357)
T 4g56_B 195 TIFLSCGEDGRILLWDTRKPKPATRIDFCA-----------SDTIPTSVTWHPE-----KDDTFACGDETGNVSLVNIKN 258 (357)
T ss_dssp SCEEEEETTSCEEECCTTSSSCBCBCCCTT-----------CCSCEEEEEECTT-----STTEEEEEESSSCEEEEESSC
T ss_pred ceeeeeccCCceEEEECCCCceeeeeeecc-----------ccccccchhhhhc-----ccceEEEeecccceeEEECCC
Confidence 679999999999999999988776654321 4567999999984 467899999999999999987
Q ss_pred cceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCC-cEEEEecCCCeEE
Q 017194 240 ELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERG-KYLISGGNDKLVK 318 (375)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-~~l~s~~~dg~i~ 318 (375)
+ +.+..+.+|...|++++|+ |++ ++|++|+.|++|+
T Consensus 259 ~----------------------------------------~~~~~~~~~~~~v~~l~~s---p~~~~~lasgs~D~~i~ 295 (357)
T 4g56_B 259 P----------------------------------------DSAQTSAVHSQNITGLAYS---YHSSPFLASISEDCTVA 295 (357)
T ss_dssp G----------------------------------------GGCEEECCCSSCEEEEEEC---SSSSCCEEEEETTSCEE
T ss_pred C----------------------------------------cEeEEEeccceeEEEEEEc---CCCCCEEEEEeCCCEEE
Confidence 4 2334677899999999999 776 6899999999999
Q ss_pred EEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 319 VWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 319 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
|||+++++ ++ ...+|.+.|++++|+|.++++|++++.||+|++|+++
T Consensus 296 iwd~~~~~---------~~-~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 296 VLDADFSE---------VF-RDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp EECTTSCE---------EE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred EEECCCCc---------Ee-EECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECC
Confidence 99999873 33 3348999999999999789999999999999999984
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.1e-52 Score=349.10 Aligned_cols=290 Identities=14% Similarity=0.138 Sum_probs=242.3
Q ss_pred ecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccC-----------ceeeEeeecCccEEEEEEeCCCCeEEEEcCCC
Q 017194 12 RGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSK-----------DVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGK 80 (375)
Q Consensus 12 ~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~-----------~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~ 80 (375)
..|...|.+++|+|| |++|++++ |+++++||.... ........+...|.+++|+|++ .|++++.||
T Consensus 27 ~~~~~~v~~~~fs~d-G~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg 103 (344)
T 4gqb_B 27 ACMERQLEAARYRSD-GALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSG 103 (344)
T ss_dssp SSCCSEEEEEEECTT-SCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTS
T ss_pred ccccCCEEEEEECCC-CCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCC
Confidence 457788999999999 89998887 678888873211 1122223467889999999985 688999999
Q ss_pred eEEEEECCCCCcccccc-cccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCC
Q 017194 81 EVKSFDVHMPASWRPLE-SYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKP 159 (375)
Q Consensus 81 ~i~iwd~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 159 (375)
+|++||+++++...... ...+|...|.+++|+|++++|++|+.|++|++||+++++.+..+. +|...|.+++|+|++.
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~-~h~~~V~~~~~~~~~~ 182 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYR-AHAAQVTCVAASPHKD 182 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECSSCT
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc-CcCCceEEEEecCCCC
Confidence 99999999876544433 345789999999999999999999999999999999999999999 9999999999999987
Q ss_pred cEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCC
Q 017194 160 WEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIES 239 (375)
Q Consensus 160 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 239 (375)
.+|++++.|++|++||++++++...+.... +...+.+++|+|. ++++|++|+.||.|++||+++
T Consensus 183 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-----------~~~~~~~~~~~p~-----~~~~l~sg~~dg~v~~wd~~~ 246 (344)
T 4gqb_B 183 SVFLSCSEDNRILLWDTRCPKPASQIGCSA-----------PGYLPTSLAWHPQ-----QSEVFVFGDENGTVSLVDTKS 246 (344)
T ss_dssp TEEEEEETTSCEEEEETTSSSCEEECC---------------CCCEEEEEECSS-----CTTEEEEEETTSEEEEEESCC
T ss_pred Cceeeeccccccccccccccceeeeeecce-----------eeccceeeeecCC-----CCcceEEeccCCcEEEEECCC
Confidence 689999999999999999998887765331 3456899999985 677899999999999999987
Q ss_pred cceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCC-cEEEEecCCCeEE
Q 017194 240 ELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERG-KYLISGGNDKLVK 318 (375)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-~~l~s~~~dg~i~ 318 (375)
+ +++..+.+|...|++++|+ |++ ++|++|+.|++|+
T Consensus 247 ~----------------------------------------~~~~~~~~h~~~v~~v~fs---p~g~~~lasgs~D~~i~ 283 (344)
T 4gqb_B 247 T----------------------------------------SCVLSSAVHSQCVTGLVFS---PHSVPFLASLSEDCSLA 283 (344)
T ss_dssp ------------------------------------------CCEEEECCSSCEEEEEEC---SSSSCCEEEEETTSCEE
T ss_pred C----------------------------------------cEEEEEcCCCCCEEEEEEc---cCCCeEEEEEeCCCeEE
Confidence 4 4455788999999999999 887 5899999999999
Q ss_pred EEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCC-cEEEeeCCCeEEEEecC
Q 017194 319 VWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESE-NLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 319 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~dg~v~iw~~~ 375 (375)
|||+.++ +++ .+.+|.+.|.+++|+| +++ +|++++.|++|++|+++
T Consensus 284 vwd~~~~---------~~~-~~~~H~~~V~~v~~sp-~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 284 VLDSSLS---------ELF-RSQAHRDFVRDATWSP-LNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp EECTTCC---------EEE-EECCCSSCEEEEEECS-SSTTEEEEEETTSCEEEEECC
T ss_pred EEECCCC---------cEE-EEcCCCCCEEEEEEeC-CCCeEEEEEcCCCeEEEEECC
Confidence 9999987 332 4578999999999999 665 56789999999999974
No 9
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.4e-52 Score=349.85 Aligned_cols=324 Identities=13% Similarity=0.135 Sum_probs=256.5
Q ss_pred CCcCCCCCeeeecCCC-ceeEEEEecCCCCEEEEeCCCCcEEEEecccCceee---EeeecCccEEEEEEeCCCCeEEEE
Q 017194 1 MTDAEAKPRRLRGHKA-TATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQL---VTDVGNGPVTSLCFKSGNEDIIYV 76 (375)
Q Consensus 1 m~~~~~~~~~l~~h~~-~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~---~~~~~~~~v~~l~~~~~~~~l~~~ 76 (375)
|.+....+.++++|.+ .|++++|+|+ +++||+|+.|++|+|||+.++.... ...+|...|.+++|+|++++|+++
T Consensus 1 ~~~~~~~~~~~~~h~~~~v~~l~~sp~-g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~ 79 (345)
T 3fm0_A 1 MKDSLVLLGRVPAHPDSRCWFLAWNPA-GTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASA 79 (345)
T ss_dssp ---CEEEEEEECCSTTSCEEEEEECTT-SSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEE
T ss_pred CCccEEEeeeecCCCCCcEEEEEECCC-CCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEE
Confidence 5667778889999998 9999999999 8999999999999999998876432 235799999999999999999999
Q ss_pred cCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCc---eeeeeEecCcccceeEEE
Q 017194 77 SSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQH---CLYKSLRAGHSSICSSVQ 153 (375)
Q Consensus 77 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~v~~~~ 153 (375)
+.|+.+++|++.++. ...+..+.+|...|.+++|+|++++|++++.|+.|++||++++ +.+..+. +|...|.+++
T Consensus 80 s~D~~v~iw~~~~~~-~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-~h~~~v~~~~ 157 (345)
T 3fm0_A 80 SFDATTCIWKKNQDD-FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLN-SHTQDVKHVV 157 (345)
T ss_dssp ETTSCEEEEEECCC--EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEEC-CCCSCEEEEE
T ss_pred ECCCcEEEEEccCCC-eEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEec-CcCCCeEEEE
Confidence 999999999988643 3456677889999999999999999999999999999999865 3456677 8999999999
Q ss_pred EeeCCCcEEEEeecCCeEEEeeCCCCCcc--eEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCc
Q 017194 154 FIPWKPWEVISGGLDSKLVMWDFSKGRPN--KIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGV 231 (375)
Q Consensus 154 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~ 231 (375)
|+|+++ +|++++.|+.|++||.++++.. ..+. + |...|.+++|+| ++++|++++.|+.
T Consensus 158 ~~p~~~-~l~s~s~d~~i~~w~~~~~~~~~~~~~~-~------------h~~~v~~l~~sp------~g~~l~s~s~D~~ 217 (345)
T 3fm0_A 158 WHPSQE-LLASASYDDTVKLYREEEDDWVCCATLE-G------------HESTVWSLAFDP------SGQRLASCSDDRT 217 (345)
T ss_dssp ECSSSS-CEEEEETTSCEEEEEEETTEEEEEEEEC-C------------CSSCEEEEEECT------TSSEEEEEETTSC
T ss_pred ECCCCC-EEEEEeCCCcEEEEEecCCCEEEEEEec-C------------CCCceEEEEECC------CCCEEEEEeCCCe
Confidence 999998 7999999999999999877543 3333 2 578899999999 8999999999999
Q ss_pred EEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecC-CCccEEEEEEeecCCCCcEEEE
Q 017194 232 VDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGG-HTAAASCVAFSMFGERGKYLIS 310 (375)
Q Consensus 232 i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~~~l~s 310 (375)
|++||........... ... ......++..+.+ |...|.+++|+ |++..|++
T Consensus 218 v~iW~~~~~~~~~~~~--------~~~-----------------~~~~~~~~~~~~~~h~~~v~~v~~~---~~~~~l~s 269 (345)
T 3fm0_A 218 VRIWRQYLPGNEQGVA--------CSG-----------------SDPSWKCICTLSGFHSRTIYDIAWC---QLTGALAT 269 (345)
T ss_dssp EEEEEEECTTCTTCCC--------CC--------------------CEEEEEEEECSSCSSCEEEEEEC---TTTCCEEE
T ss_pred EEEeccccCCCCccce--------eec-----------------cCCccceeEEecCCCCCcEEEEEEe---cCCCEEEE
Confidence 9999975321110000 000 0112244445555 88999999999 99999999
Q ss_pred ecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 311 GGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 311 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
++.|+.|++|+....................+|...|.+++|+|.+..+|++|+.||.|++|++.
T Consensus 270 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~ 334 (345)
T 3fm0_A 270 ACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQ 334 (345)
T ss_dssp EETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEEC
T ss_pred EeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEec
Confidence 99999999999876531100000001122457999999999999333689999999999999974
No 10
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.5e-52 Score=354.49 Aligned_cols=307 Identities=15% Similarity=0.191 Sum_probs=256.4
Q ss_pred CCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEE
Q 017194 6 AKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSF 85 (375)
Q Consensus 6 ~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iw 85 (375)
...++|++|.++|++++|+|+ +++|++|+.||+|+|||+.+++....+..|...|.+++|+|++++|++++.|+.+++|
T Consensus 57 ~~~~~l~gH~~~V~~~~~sp~-~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 57 VCCRTLQGHSGKVYSLDWTPE-KNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIF 135 (380)
T ss_dssp EEEEEECCCSSCEEEEEECTT-SSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEE
T ss_pred EEeecccccccEEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEE
Confidence 345789999999999999998 8999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCC----cccccccccCCCcceeEEEEcCC-CCeEEEEeCCCcEEEEeCcCceeeeeE-----ecCcccceeEEEEe
Q 017194 86 DVHMPA----SWRPLESYNYNKEEINQIVCNPK-SSFLACADDGGDVKIIDIRQHCLYKSL-----RAGHSSICSSVQFI 155 (375)
Q Consensus 86 d~~~~~----~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~-----~~~~~~~v~~~~~~ 155 (375)
++.+.. .......+.+|.+.|.++.|.|+ +..|++|+.|++|++||+++++.+..+ . +|...|.+++|+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~ 214 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPS-GHTADVLSLSIN 214 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSS-SCCSCEEEEEEC
T ss_pred ECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCC-CCccCeEEEEee
Confidence 997532 22344567789999999999996 457999999999999999999888777 4 789999999998
Q ss_pred eCCCcEEEEeecCCeEEEeeCCC-CCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEE
Q 017194 156 PWKPWEVISGGLDSKLVMWDFSK-GRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDV 234 (375)
Q Consensus 156 ~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 234 (375)
+.+..+|++|+.|++|++||++. ++.+..+. + |...|.+++|+| ++++|++|+.||.|++
T Consensus 215 ~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~-~------------h~~~v~~v~~~p------~~~~l~s~s~D~~i~l 275 (380)
T 3iz6_a 215 SLNANMFISGSCDTTVRLWDLRITSRAVRTYH-G------------HEGDINSVKFFP------DGQRFGTGSDDGTCRL 275 (380)
T ss_dssp SSSCCEEEEEETTSCEEEEETTTTCCCCEEEC-C------------CSSCCCEEEECT------TSSEEEEECSSSCEEE
T ss_pred cCCCCEEEEEECCCeEEEEECCCCCcceEEEC-C------------cCCCeEEEEEec------CCCeEEEEcCCCeEEE
Confidence 84333899999999999999984 45555554 3 578899999999 8999999999999999
Q ss_pred EeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCC
Q 017194 235 INIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGND 314 (375)
Q Consensus 235 ~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~d 314 (375)
||++++.......... .....+...|.+++|+ |+|++|++|+.|
T Consensus 276 wd~~~~~~~~~~~~~~---------------------------------~~~~~~~~~v~~~~~s---~~g~~l~~g~~d 319 (380)
T 3iz6_a 276 FDMRTGHQLQVYNREP---------------------------------DRNDNELPIVTSVAFS---ISGRLLFAGYSN 319 (380)
T ss_dssp EETTTTEEEEEECCCC---------------------------------SSSCCSSCSCSEEEEC---SSSSEEEEECTT
T ss_pred EECCCCcEEEEecccc---------------------------------cccccccCceEEEEEC---CCCCEEEEEECC
Confidence 9999864332211100 0111233458899999 999999999999
Q ss_pred CeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 315 KLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 315 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
|.|++||+..++... .+.....+|.+.|.+++|+| ++++|++|+.||.|++|+++
T Consensus 320 g~i~vwd~~~~~~~~-----~~~~~~~~h~~~v~~l~~s~-dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 320 GDCYVWDTLLAEMVL-----NLGTLQNSHEGRISCLGLSS-DGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp SCEEEEETTTCCEEE-----EECCSCSSCCCCCCEEEECS-SSSEEEEECTTSCEEEEECC
T ss_pred CCEEEEECCCCceEE-----EEecccCCCCCceEEEEECC-CCCEEEEeeCCCCEEEEecC
Confidence 999999998874321 11112257999999999999 99999999999999999974
No 11
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7.9e-51 Score=338.14 Aligned_cols=294 Identities=20% Similarity=0.258 Sum_probs=257.8
Q ss_pred CCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEE
Q 017194 6 AKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSF 85 (375)
Q Consensus 6 ~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iw 85 (375)
....++.+|.++|++++|+|+ +++|++|+.||.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~-~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW 92 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eeEEEEcccCCcEEEEEECCC-CCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE
Confidence 345678899999999999998 8999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEe
Q 017194 86 DVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISG 165 (375)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 165 (375)
|+++++ .+..+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+. .|...|.+++|+|+++ +|+++
T Consensus 93 d~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~ 167 (312)
T 4ery_A 93 DVSSGK---CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDPVSAVHFNRDGS-LIVSS 167 (312)
T ss_dssp ETTTCC---EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSS-EEEEE
T ss_pred ECCCCc---EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec-CCCCcEEEEEEcCCCC-EEEEE
Confidence 998764 344566788999999999999999999999999999999999999998 8999999999999998 79999
Q ss_pred ecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeec
Q 017194 166 GLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISR 245 (375)
Q Consensus 166 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 245 (375)
+.|+.|++||+++++.+..+... +...+..++|+| ++++|++++.||.|++||+++++
T Consensus 168 ~~d~~i~~wd~~~~~~~~~~~~~------------~~~~~~~~~~~~------~~~~l~~~~~d~~i~iwd~~~~~---- 225 (312)
T 4ery_A 168 SYDGLCRIWDTASGQCLKTLIDD------------DNPPVSFVKFSP------NGKYILAATLDNTLKLWDYSKGK---- 225 (312)
T ss_dssp ETTSCEEEEETTTCCEEEEECCS------------SCCCEEEEEECT------TSSEEEEEETTTEEEEEETTTTE----
T ss_pred eCCCcEEEEECCCCceeeEEecc------------CCCceEEEEECC------CCCEEEEEcCCCeEEEEECCCCc----
Confidence 99999999999998887776543 456789999999 79999999999999999998752
Q ss_pred ccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEE--EEEeecCCCCcEEEEecCCCeEEEEeCC
Q 017194 246 SKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASC--VAFSMFGERGKYLISGGNDKLVKVWDCS 323 (375)
Q Consensus 246 ~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~s~~~~~~~~l~s~~~dg~i~iwd~~ 323 (375)
.+..+.+|...+.. ..+++ +++.+|++|+.||.|++||+.
T Consensus 226 ------------------------------------~~~~~~~~~~~~~~~~~~~~~--~~~~~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 226 ------------------------------------CLKTYTGHKNEKYCIFANFSV--TGGKWIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp ------------------------------------EEEEECSSCCSSSCCCEEEEC--SSSCEEEECCTTSCEEEEETT
T ss_pred ------------------------------------EEEEEEecCCceEEEEEEEEe--CCCcEEEEECCCCEEEEEECC
Confidence 33345555443222 23332 678999999999999999999
Q ss_pred CceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEee--CCCeEEEEecC
Q 017194 324 RFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCD--TSKVVKVYSIS 375 (375)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~--~dg~v~iw~~~ 375 (375)
++ +++..+.+|...|.+++|+| ++++|++++ .|+.|++|+..
T Consensus 268 ~~---------~~~~~~~~h~~~v~~~~~~p-~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 268 TK---------EIVQKLQGHTDVVISTACHP-TENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp TC---------CEEEEECCCSSCEEEEEECS-SSSEEEEEECTTTCCEEEEECC
T ss_pred Cc---------hhhhhhhccCCcEEEEeecC-cCCceEEEEccCCccEEEecCC
Confidence 98 66677889999999999999 889999987 69999999863
No 12
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.3e-49 Score=331.16 Aligned_cols=299 Identities=16% Similarity=0.212 Sum_probs=249.6
Q ss_pred CCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccC-----ceeeEeeecCccEEEEEEeCCCCeEEEEcCC
Q 017194 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSK-----DVQLVTDVGNGPVTSLCFKSGNEDIIYVSSG 79 (375)
Q Consensus 5 ~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~-----~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d 79 (375)
.....+|++|.++|++++|+|+++++|++|+.|++|++|++... .++..+.+|...|.+++|+|++++|++++.|
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D 86 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWD 86 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCC
Confidence 34556899999999999999975689999999999999998643 3467788999999999999999999999999
Q ss_pred CeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCC
Q 017194 80 KEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKP 159 (375)
Q Consensus 80 ~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 159 (375)
++|++||+++++ .+..+.+|...|.+++|+|++++|++++.|+.|++||++ ++.+..+. +|...|.+++|.|...
T Consensus 87 ~~v~~wd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~-~h~~~v~~~~~~~~~~ 161 (319)
T 3frx_A 87 KTLRLWDVATGE---TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLL-GHNDWVSQVRVVPNEK 161 (319)
T ss_dssp SEEEEEETTTTE---EEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEEC-CCSSCEEEEEECCC--
T ss_pred CEEEEEECCCCC---eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEe-ccCCcEEEEEEccCCC
Confidence 999999999764 445667789999999999999999999999999999996 55667787 8999999999998532
Q ss_pred -----cEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEE
Q 017194 160 -----WEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDV 234 (375)
Q Consensus 160 -----~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 234 (375)
..+++++.|+.|++||+++.+....+. + |...|.+++|+| ++++|++++.||.|++
T Consensus 162 ~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-~------------h~~~v~~~~~sp------~g~~l~s~~~dg~i~i 222 (319)
T 3frx_A 162 ADDDSVTIISAGNDKMVKAWNLNQFQIEADFI-G------------HNSNINTLTASP------DGTLIASAGKDGEIML 222 (319)
T ss_dssp ----CCEEEEEETTSCEEEEETTTTEEEEEEC-C------------CCSCEEEEEECT------TSSEEEEEETTCEEEE
T ss_pred CCCCccEEEEEeCCCEEEEEECCcchhheeec-C------------CCCcEEEEEEcC------CCCEEEEEeCCCeEEE
Confidence 269999999999999999887766665 3 578999999999 8999999999999999
Q ss_pred EeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCC
Q 017194 235 INIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGND 314 (375)
Q Consensus 235 ~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~d 314 (375)
||+.+. +.+..+.. ...|.+++|+ |++.+|++++.+
T Consensus 223 wd~~~~----------------------------------------~~~~~~~~-~~~v~~~~~s---p~~~~la~~~~~ 258 (319)
T 3frx_A 223 WNLAAK----------------------------------------KAMYTLSA-QDEVFSLAFS---PNRYWLAAATAT 258 (319)
T ss_dssp EETTTT----------------------------------------EEEEEEEC-CSCEEEEEEC---SSSSEEEEEETT
T ss_pred EECCCC----------------------------------------cEEEEecC-CCcEEEEEEc---CCCCEEEEEcCC
Confidence 999974 22334443 4679999999 999999988765
Q ss_pred CeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEec
Q 017194 315 KLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 315 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
.+++|++........... ........|...+.+++|+| +|++|++|+.||.|++|++
T Consensus 259 -~i~v~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~sp-dg~~l~sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 259 -GIKVFSLDPQYLVDDLRP-EFAGYSKAAEPHAVSLAWSA-DGQTLFAGYTDNVIRVWQV 315 (319)
T ss_dssp -EEEEEEETTEEEEEEECC-CCTTCCGGGCCCEEEEEECT-TSSEEEEEETTSCEEEEEE
T ss_pred -CcEEEEeCcCeeeeccCc-cccccccCcCcceeEEEECC-CCCEEEEeecCceEEEEEE
Confidence 599999988643321110 11112235677899999999 9999999999999999997
No 13
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-49 Score=332.89 Aligned_cols=308 Identities=14% Similarity=0.116 Sum_probs=240.5
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCc--eeeEe-ee-cCccEEEEEEeCCCCeEEEEcCC
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKD--VQLVT-DV-GNGPVTSLCFKSGNEDIIYVSSG 79 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~--~~~~~-~~-~~~~v~~l~~~~~~~~l~~~~~d 79 (375)
+.+.+++|++|.++|++++|+|+ +||+|+.|++|++||+..+. ....+ .. |...|.+++|+|++++|++++.|
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~---~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D 79 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQG---ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD 79 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETT---EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT
T ss_pred ccccceeeccCCCceeeeccCCC---EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC
Confidence 45567889999999999999975 99999999999999998753 34455 34 99999999999999999999999
Q ss_pred CeEEEEECCCCC----cccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcC----ceeeeeEecCcccceeE
Q 017194 80 KEVKSFDVHMPA----SWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQ----HCLYKSLRAGHSSICSS 151 (375)
Q Consensus 80 ~~i~iwd~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~~v~~ 151 (375)
++|++||++... ....+..+.+|...|.+++|+|++++|++++.|+.|++||++. .+.+..+. +|...|.+
T Consensus 80 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~-~h~~~v~~ 158 (330)
T 2hes_X 80 STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ-EHSQDVKH 158 (330)
T ss_dssp SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC-CCSSCEEE
T ss_pred CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec-cCCCceEE
Confidence 999999986432 2244566778999999999999999999999999999999943 24567788 89999999
Q ss_pred EEEeeCCCcEEEEeecCCeEEEeeCCCC--CcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecC
Q 017194 152 VQFIPWKPWEVISGGLDSKLVMWDFSKG--RPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGD 229 (375)
Q Consensus 152 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~d 229 (375)
++|+|++. +|++++.|++|++||..++ +++..+. + |...|.+++|+|. .++.+|++++.|
T Consensus 159 v~~~p~~~-~l~s~s~D~~i~iW~~~~~~~~~~~~~~-~------------h~~~v~~~~~~~~----~~~~~l~s~s~D 220 (330)
T 2hes_X 159 VIWHPSEA-LLASSSYDDTVRIWKDYDDDWECVAVLN-G------------HEGTVWSSDFDKT----EGVFRLCSGSDD 220 (330)
T ss_dssp EEECSSSS-EEEEEETTSCEEEEEEETTEEEEEEEEC-C------------CSSCEEEEEECCS----SSSCEEEEEETT
T ss_pred EEECCCCC-EEEEEcCCCeEEEEECCCCCeeEEEEcc-C------------CCCcEEEEEecCC----CCeeEEEEEeCC
Confidence 99999998 8999999999999998766 4455554 3 5789999999991 126789999999
Q ss_pred CcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecC-CCccEEEEEEeecCCCCcEE
Q 017194 230 GVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGG-HTAAASCVAFSMFGERGKYL 308 (375)
Q Consensus 230 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~~~l 308 (375)
+.|++||+.+..... .....+...+.+ |...|.+++|+ +++ +|
T Consensus 221 ~~v~iw~~~~~~~~~--------------------------------~~~~~~~~~~~~~h~~~v~~v~~s---~~~-~l 264 (330)
T 2hes_X 221 STVRVWKYMGDDEDD--------------------------------QQEWVCEAILPDVHKRQVYNVAWG---FNG-LI 264 (330)
T ss_dssp SCEEEEEEEEECTTS--------------------------------CEEEEEEEECCSCCSSCEEEEEEC---TTS-CE
T ss_pred CeEEEEEecCCCccc--------------------------------cceeEEeeecccccccceEEEEEc---CCC-EE
Confidence 999999987531100 111233344544 89999999998 665 89
Q ss_pred EEecCCCeEEEEeCCCceeeeecchhhhhhhhccccc-ceeeeeecCC-CCCcEEEeeCCCeEEEEecC
Q 017194 309 ISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNK-KVNWLCTTPT-ESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 309 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~-~~~~l~s~~~dg~v~iw~~~ 375 (375)
++++.||.|++||..+++.. .......+|.. .|.+++|+|. ++++|++++.||.|++|+++
T Consensus 265 ~s~~~dg~v~iw~~~~~~~~------~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 265 ASVGADGVLAVYEEVDGEWK------VFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp EEEETTSCEEEEEEETTEEE------EEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred EEEeCCCEEEEEEcCCCceE------EEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 99999999999998775311 11123356776 8999999985 57899999999999999974
No 14
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.3e-49 Score=357.85 Aligned_cols=337 Identities=16% Similarity=0.160 Sum_probs=269.9
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCc--eeeEeeecCccEEEEEEeCCCCeEEEEcCC--
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKD--VQLVTDVGNGPVTSLCFKSGNEDIIYVSSG-- 79 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-- 79 (375)
+++....|.+|.+.|++++|+|+ +++||+|+.|++|+|||+.+++ ....+..|..+|.+++|+|++++|++++.+
T Consensus 48 ~~~~~~~~~~h~~~v~~~~~spd-g~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~ 126 (611)
T 1nr0_A 48 SLTDTEIYTEHSHQTTVAKTSPS-GYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE 126 (611)
T ss_dssp CSSCCEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSS
T ss_pred CcccCeEecCCCCceEEEEECCC-CcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCC
Confidence 45677889999999999999999 8999999999999999997554 355778899999999999999999998865
Q ss_pred --CeEEEEECCCCCcccccccccCCCcceeEEEEcCCCC-eEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEee
Q 017194 80 --KEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSS-FLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIP 156 (375)
Q Consensus 80 --~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 156 (375)
+.|++||.. .....+.+|...|.+++|+|++. .|++++.|++|++||..+++.+..+. +|...|.+++|+|
T Consensus 127 ~~~~v~~wd~~-----~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~-~H~~~V~~v~fsp 200 (611)
T 1nr0_A 127 RFGHVFLFDTG-----TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG-EHTKFVHSVRYNP 200 (611)
T ss_dssp CSEEEEETTTC-----CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC-CCSSCEEEEEECT
T ss_pred ceeEEEEeeCC-----CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeec-cccCceEEEEECC
Confidence 378888743 23455678999999999999987 59999999999999999999999999 9999999999999
Q ss_pred CCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEe
Q 017194 157 WKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVIN 236 (375)
Q Consensus 157 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d 236 (375)
+++ +|++++.|++|++||+.+++....+... ......|...|.+++|+| ++++|++++.|+.|++||
T Consensus 201 dg~-~las~s~D~~i~lwd~~~g~~~~~~~~~------~~~~~~h~~~V~~v~~sp------dg~~l~s~s~D~~v~lWd 267 (611)
T 1nr0_A 201 DGS-LFASTGGDGTIVLYNGVDGTKTGVFEDD------SLKNVAHSGSVFGLTWSP------DGTKIASASADKTIKIWN 267 (611)
T ss_dssp TSS-EEEEEETTSCEEEEETTTCCEEEECBCT------TSSSCSSSSCEEEEEECT------TSSEEEEEETTSEEEEEE
T ss_pred CCC-EEEEEECCCcEEEEECCCCcEeeeeccc------cccccccCCCEEEEEECC------CCCEEEEEeCCCeEEEEe
Confidence 998 8999999999999999998877766321 000112678999999999 899999999999999999
Q ss_pred CCCcceeecccccCCCCCCceeecccccceeeee---eeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecC
Q 017194 237 IESELNISRSKSTTKPLKGSQSTSKVNIRDAEME---ILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGN 313 (375)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~ 313 (375)
+.+++.................+..++..++... ....++.........+.+|...|.+++|+ |+|++|++++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~s---pdg~~l~s~s~ 344 (611)
T 1nr0_A 268 VATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSS---ADGKTLFSADA 344 (611)
T ss_dssp TTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEC---TTSSEEEEEET
T ss_pred CCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEe---CCCCEEEEEeC
Confidence 9987665544322211122222333555554421 11111222223556778999999999999 99999999999
Q ss_pred CCeEEEEeCCCceeeeecchhhhhhh-hcccccceeeeeecCCCCCcEEEeeCCCeEEEEec
Q 017194 314 DKLVKVWDCSRFQGVQTSINNDLLIK-NINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 314 dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
|+.|++||+.+++. ... ..+|...|.+++|++ ++ .|++++.|+.+++|++
T Consensus 345 D~~v~~Wd~~~~~~---------~~~~~~~h~~~v~~~~~s~-~~-~l~s~s~d~~v~~w~~ 395 (611)
T 1nr0_A 345 EGHINSWDISTGIS---------NRVFPDVHATMITGIKTTS-KG-DLFTVSWDDHLKVVPA 395 (611)
T ss_dssp TSCEEEEETTTCCE---------EECSSCSCSSCEEEEEECT-TS-CEEEEETTTEEEEECS
T ss_pred CCcEEEEECCCCce---------eeecccCCcceEEEEEECC-CC-cEEEEEcCCceEEeec
Confidence 99999999998742 222 257999999999997 65 7899999999999985
No 15
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.4e-49 Score=338.23 Aligned_cols=303 Identities=16% Similarity=0.192 Sum_probs=249.1
Q ss_pred cCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecC------------------ccEEEEEEeCCCCeEE
Q 017194 13 GHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGN------------------GPVTSLCFKSGNEDII 74 (375)
Q Consensus 13 ~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~------------------~~v~~l~~~~~~~~l~ 74 (375)
+|.+.|++++|+|+ +++||+|+ ++++++|++.+++.+..+..|. ..|.+++|+|++++|+
T Consensus 62 ~h~~~V~~v~fspd-g~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 62 DHTSVVCCVKFSND-GEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp ECSSCCCEEEECTT-SSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred CCCCEEEEEEECCC-CCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 69999999999999 89999987 6899999999999887776543 2499999999999999
Q ss_pred EEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEE
Q 017194 75 YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQF 154 (375)
Q Consensus 75 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 154 (375)
+++.|+.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.|+.|++||+++++....+. +...+.+++|
T Consensus 140 s~~~d~~i~iwd~~~~~---~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~--~~~~v~~~~~ 214 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRK---IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS--IEDGVTTVAV 214 (393)
T ss_dssp EEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEE
T ss_pred EEcCCCeEEEEECCCCc---EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE--cCCCcEEEEE
Confidence 99999999999998653 445567789999999999999999999999999999999999888887 6678999999
Q ss_pred ee-CCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEE
Q 017194 155 IP-WKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVD 233 (375)
Q Consensus 155 ~~-~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 233 (375)
+| ++. +|++++.|+.|++||+++++.+..+.... .....|...|.+++|+| ++++|++++.||.|+
T Consensus 215 ~~~~~~-~l~~~s~d~~v~iwd~~~~~~~~~~~~~~------~~~~~h~~~v~~v~~~~------~g~~l~s~s~d~~v~ 281 (393)
T 1erj_A 215 SPGDGK-YIAAGSLDRAVRVWDSETGFLVERLDSEN------ESGTGHKDSVYSVVFTR------DGQSVVSGSLDRSVK 281 (393)
T ss_dssp CSTTCC-EEEEEETTSCEEEEETTTCCEEEEEC------------CCCSSCEEEEEECT------TSSEEEEEETTSEEE
T ss_pred ECCCCC-EEEEEcCCCcEEEEECCCCcEEEeecccc------cCCCCCCCCEEEEEECC------CCCEEEEEeCCCEEE
Confidence 99 666 89999999999999999988777664210 00112567899999999 799999999999999
Q ss_pred EEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecC
Q 017194 234 VINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGN 313 (375)
Q Consensus 234 i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~ 313 (375)
+||+++......... .....+...+.+|...|.+++|+ |++++|++|+.
T Consensus 282 ~wd~~~~~~~~~~~~----------------------------~~~~~~~~~~~~h~~~v~~~~~~---~~~~~l~sgs~ 330 (393)
T 1erj_A 282 LWNLQNANNKSDSKT----------------------------PNSGTCEVTYIGHKDFVLSVATT---QNDEYILSGSK 330 (393)
T ss_dssp EEEC-------------------------------------------CEEEEEECCSSCEEEEEEC---GGGCEEEEEET
T ss_pred EEECCCCCCcccccC----------------------------CCCCcceEEEecccCcEEEEEEC---CCCCEEEEEeC
Confidence 999986432211100 01123445677999999999999 89999999999
Q ss_pred CCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecC-----CCCCcEEEeeCCCeEEEEecC
Q 017194 314 DKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTP-----TESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 314 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~l~s~~~dg~v~iw~~~ 375 (375)
|+.|++||+.++ +.+..+.+|...|.+++|++ +++++|++|+.||.|++|+++
T Consensus 331 D~~v~iwd~~~~---------~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 331 DRGVLFWDKKSG---------NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp TSEEEEEETTTC---------CEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred CCeEEEEECCCC---------eEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 999999999998 55567789999999999886 267899999999999999973
No 16
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1e-48 Score=352.67 Aligned_cols=324 Identities=19% Similarity=0.257 Sum_probs=277.0
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEE
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVK 83 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~ 83 (375)
+++.+..+.+|...|++++|+|+ ++.|++++.|+.|++|+.. ++....+.+|...|.+++|+|+++.|++++.|+.|+
T Consensus 251 ~~~~~~~~~~~~~~v~~v~~~~d-~~~l~~~~~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~ 328 (577)
T 2ymu_A 251 NGQLLQTLTGHSSSVNGVAFRPD-GQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVK 328 (577)
T ss_dssp TSCEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCEEEEEecCCCCEEEEEEcCC-CCEEEEEeCCCEEEEEeCC-CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEE
Confidence 44567788999999999999999 8999999999999999964 677888899999999999999999999999999999
Q ss_pred EEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEE
Q 017194 84 SFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVI 163 (375)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 163 (375)
+||... ..+..+.+|...+.+++|+|++++|++++.|+.|++||. +++.+..+. +|...|++++|+|+++ +|+
T Consensus 329 ~w~~~~----~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~-~~~~~v~~~~~s~dg~-~l~ 401 (577)
T 2ymu_A 329 LWNRNG----QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT-GHSSSVRGVAFSPDGQ-TIA 401 (577)
T ss_dssp EEETTS----CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEE-CCSSCEEEEEECTTSS-CEE
T ss_pred EEeCCC----CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEec-CCCCCeEEEEECCCCC-EEE
Confidence 999874 234456678899999999999999999999999999995 677788888 9999999999999998 799
Q ss_pred EeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCccee
Q 017194 164 SGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNI 243 (375)
Q Consensus 164 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 243 (375)
+++.|+.|++||. +++.+..+.. |...|.+++|+| ++++|++++.|+.|++||.... ..
T Consensus 402 ~~~~d~~v~~~~~-~~~~~~~~~~-------------~~~~v~~~~~s~------d~~~l~~~~~d~~v~~w~~~~~-~~ 460 (577)
T 2ymu_A 402 SASDDKTVKLWNR-NGQLLQTLTG-------------HSSSVWGVAFSP------DDQTIASASDDKTVKLWNRNGQ-LL 460 (577)
T ss_dssp EEETTSEEEEECT-TCCEEEEEEC-------------CSSCEEEEEECT------TSSEEEEEETTSEEEEEETTSC-EE
T ss_pred EEeCCCEEEEEeC-CCCEEEEecC-------------CCCCeEEEEECC------CCCEEEEEcCCCEEEEEECCCC-EE
Confidence 9999999999995 4666666653 468899999999 8999999999999999997543 32
Q ss_pred ecccccCCCCCCceeecccccceeeee---eeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEE
Q 017194 244 SRSKSTTKPLKGSQSTSKVNIRDAEME---ILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 320 (375)
Q Consensus 244 ~~~~~~~~~~~~~~~~s~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iw 320 (375)
... ......+.+++|+|+++++++.+ ....++ ...+++..+.+|...|++++|+ |++++|++++.||.|++|
T Consensus 461 ~~~-~~~~~~v~~~~~spd~~~las~~~d~~i~iw~-~~~~~~~~~~~h~~~v~~l~~s---~dg~~l~s~~~dg~v~lw 535 (577)
T 2ymu_A 461 QTL-TGHSSSVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFS---PDGQTIASASDDKTVKLW 535 (577)
T ss_dssp EEE-ECCSSCEEEEEECTTSCEEEEEETTSEEEEEE-TTSCEEEEEECCSSCEEEEEEC---TTSSCEEEEETTSEEEEE
T ss_pred EEE-cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEc-CCCCEEEEEeCCCCCEEEEEEc---CCCCEEEEEECcCEEEEE
Confidence 222 23446678899999999998632 111121 2235567888999999999999 999999999999999999
Q ss_pred eCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEe
Q 017194 321 DCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYS 373 (375)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~ 373 (375)
|.. + +.+..+.+|.+.|++++|+| |+++|+|++.|++|++||
T Consensus 536 d~~-~---------~~~~~~~~h~~~v~~~~fs~-dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 536 NRN-G---------QLLQTLTGHSSSVWGVAFSP-DGQTIASASSDKTVKLWN 577 (577)
T ss_dssp CTT-S---------CEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEEC
T ss_pred eCC-C---------CEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCEEEEeC
Confidence 964 3 55667889999999999999 999999999999999997
No 17
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.2e-48 Score=325.83 Aligned_cols=306 Identities=15% Similarity=0.235 Sum_probs=249.8
Q ss_pred CCcCCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCc-----eeeEeeecCccEEEEEEeCCCCeEEE
Q 017194 1 MTDAEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKD-----VQLVTDVGNGPVTSLCFKSGNEDIIY 75 (375)
Q Consensus 1 m~~~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~-----~~~~~~~~~~~v~~l~~~~~~~~l~~ 75 (375)
|++++....+|+||++.|++++|+|+++++||||+.|++|+|||+.+.+ +...+.+|...|.+++|+|++++|++
T Consensus 24 ~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s 103 (340)
T 4aow_A 24 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 103 (340)
T ss_dssp --CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred cCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEE
Confidence 3456666678999999999999999867899999999999999987654 35677889999999999999999999
Q ss_pred EcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeee-eEecCcccceeEEEE
Q 017194 76 VSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYK-SLRAGHSSICSSVQF 154 (375)
Q Consensus 76 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~~v~~~~~ 154 (375)
++.|+.|++|+....... .....+...+....+++++++|++++.|+.+++||+....... .+. +|...+..++|
T Consensus 104 ~~~d~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~-~~~~~v~~~~~ 179 (340)
T 4aow_A 104 GSWDGTLRLWDLTTGTTT---RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDE-SHSEWVSCVRF 179 (340)
T ss_dssp EETTSEEEEEETTTTEEE---EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSS-SCSSCEEEEEE
T ss_pred EcccccceEEeeccccee---eeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEec-cccCcccceEE
Confidence 999999999999865432 3333456788899999999999999999999999997665433 344 78999999999
Q ss_pred eeCCC-cEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEE
Q 017194 155 IPWKP-WEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVD 233 (375)
Q Consensus 155 ~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 233 (375)
++++. .++++++.|+.|++||+++++....+.. |...|++++|+| ++++|++|+.||.|+
T Consensus 180 ~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~-------------h~~~v~~~~~s~------~~~~l~s~s~Dg~i~ 240 (340)
T 4aow_A 180 SPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIG-------------HTGYLNTVTVSP------DGSLCASGGKDGQAM 240 (340)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTTTEEEEEECC-------------CSSCEEEEEECT------TSSEEEEEETTCEEE
T ss_pred ccCCCCcEEEEEcCCCEEEEEECCCCceeeEecC-------------CCCcEEEEEECC------CCCEEEEEeCCCeEE
Confidence 98764 3678999999999999999888777753 468899999999 899999999999999
Q ss_pred EEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecC
Q 017194 234 VINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGN 313 (375)
Q Consensus 234 i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~ 313 (375)
+||+++.+ .+..+.. ...|.++.|+ |++. +++++.
T Consensus 241 iwd~~~~~----------------------------------------~~~~~~~-~~~v~~~~~~---~~~~-~~~~~~ 275 (340)
T 4aow_A 241 LWDLNEGK----------------------------------------HLYTLDG-GDIINALCFS---PNRY-WLCAAT 275 (340)
T ss_dssp EEETTTTE----------------------------------------EEEEEEC-SSCEEEEEEC---SSSS-EEEEEE
T ss_pred EEEeccCc----------------------------------------eeeeecC-CceEEeeecC---CCCc-eeeccC
Confidence 99999742 2333433 4579999999 7765 556667
Q ss_pred CCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 314 DKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 314 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
|+.|++||++..................+|...|++++|+| ++++|++|+.||.|+|||++
T Consensus 276 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 276 GPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA-DGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp TTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECT-TSSEEEEEETTSCEEEEEEE
T ss_pred CCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEeCC
Confidence 99999999998765544433344455678999999999999 99999999999999999974
No 18
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.9e-48 Score=327.76 Aligned_cols=300 Identities=18% Similarity=0.212 Sum_probs=240.1
Q ss_pred CCCeeeecCCCceeEEEE-----ecCCCCEEEEeCCCCcEEEEecccC-------ceeeEeeecCccEEEEEEeCCCCeE
Q 017194 6 AKPRRLRGHKATATCCIA-----SRDRPGFVASSGEDGCICWFDLRSK-------DVQLVTDVGNGPVTSLCFKSGNEDI 73 (375)
Q Consensus 6 ~~~~~l~~h~~~i~~~~~-----~~~~~~~l~s~~~d~~i~iw~~~~~-------~~~~~~~~~~~~v~~l~~~~~~~~l 73 (375)
.....|++|.+.|++++| ++.++++|++|+.|++|++||+.+. .+...+.+|...|.+++|+|++.++
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence 456689999999999999 7733899999999999999998754 3466788999999999999999999
Q ss_pred EEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeE--ecCcccceeE
Q 017194 74 IYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSL--RAGHSSICSS 151 (375)
Q Consensus 74 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~~v~~ 151 (375)
++++.|++|++||+++++ .+..+.+|...|.+++|+|++++|++++.|+.|++||+......... . .|...|.+
T Consensus 92 ~s~s~D~~v~lwd~~~~~---~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~v~~ 167 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGT---TYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKE-NHSDWVSC 167 (343)
T ss_dssp EEEETTSEEEEEETTSSC---EEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTT-SCSSCEEE
T ss_pred EEEcCCCcEEEEECCCCc---EEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeeccc-CCCceeee
Confidence 999999999999999764 44556678999999999999999999999999999999744332221 2 58889999
Q ss_pred EEEeeCC----------CcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCC
Q 017194 152 VQFIPWK----------PWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNK 221 (375)
Q Consensus 152 ~~~~~~~----------~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 221 (375)
++|+|++ + +|++++.|+.|++||. ..+....+. . |...|.+++|+| +++
T Consensus 168 ~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~-~~~~~~~~~-~------------h~~~v~~~~~s~------~g~ 226 (343)
T 2xzm_R 168 VRYSPIMKSANKVQPFAP-YFASVGWDGRLKVWNT-NFQIRYTFK-A------------HESNVNHLSISP------NGK 226 (343)
T ss_dssp EEECCCCCSCSCCCSSCC-EEEEEETTSEEEEEET-TTEEEEEEE-C------------CSSCEEEEEECT------TSS
T ss_pred eeeccccccccccCCCCC-EEEEEcCCCEEEEEcC-CCceeEEEc-C------------ccccceEEEECC------CCC
Confidence 9999987 4 7999999999999994 344555554 2 568899999999 899
Q ss_pred EEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeec
Q 017194 222 ICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMF 301 (375)
Q Consensus 222 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 301 (375)
+|++|+.||.|++||+...... ...+ .+...|.+++|+
T Consensus 227 ~l~sgs~dg~v~iwd~~~~~~~---------------------------------------~~~~-~~~~~v~~v~~s-- 264 (343)
T 2xzm_R 227 YIATGGKDKKLLIWDILNLTYP---------------------------------------QREF-DAGSTINQIAFN-- 264 (343)
T ss_dssp EEEEEETTCEEEEEESSCCSSC---------------------------------------SEEE-ECSSCEEEEEEC--
T ss_pred EEEEEcCCCeEEEEECCCCccc---------------------------------------ceee-cCCCcEEEEEEC--
Confidence 9999999999999999542100 0111 234569999999
Q ss_pred CCCCcEEEEecCCCeEEEEeCCCceeee--ecc--hhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 302 GERGKYLISGGNDKLVKVWDCSRFQGVQ--TSI--NNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 302 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
|++++++++ .|+.|++||+.+.+... ... .........+|...|.+++|+| ++++|++|+.||.|++|+++
T Consensus 265 -p~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 265 -PKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNA-LGKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp -SSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECS-SSCCEEEEETTSEEEEEEEE
T ss_pred -CCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECC-CCCeEEEecCCceEEEEEEE
Confidence 899887655 57889999998764321 100 0011112347888999999999 99999999999999999973
No 19
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=8.3e-47 Score=340.29 Aligned_cols=325 Identities=19% Similarity=0.254 Sum_probs=275.5
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEE
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVK 83 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~ 83 (375)
+++.+..+.+|...|.+++|+|+ +++|++++.|+.|++||. +++.+..+.+|...|.+++|+|+++.|++++.|+.|+
T Consensus 210 ~~~~~~~~~~~~~~v~~~~~s~d-g~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~ 287 (577)
T 2ymu_A 210 NGQLLQTLTGHSSSVRGVAFSPD-GQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVK 287 (577)
T ss_dssp TSCEEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEECT-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCcEEEEEecCCCCEEEEEECCC-CCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEE
Confidence 45567788999999999999999 899999999999999996 4677888999999999999999999999999999999
Q ss_pred EEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEE
Q 017194 84 SFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVI 163 (375)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 163 (375)
+||... +.+..+.+|...|.+++|+|++++|++++.|+.|++||... +.+..+. +|...+.+++|+|+++ .++
T Consensus 288 ~w~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~-~~~~~~~-~~~~~v~~~~~s~~g~-~l~ 360 (577)
T 2ymu_A 288 LWNRNG----QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QHLQTLT-GHSSSVWGVAFSPDGQ-TIA 360 (577)
T ss_dssp EEETTS----CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEEEEEC-CCSSCEEEEEECTTSS-EEE
T ss_pred EEeCCC----cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-CeeEEEe-CCCCCEEEEEECCCCC-EEE
Confidence 999753 34556677899999999999999999999999999999754 4556777 8999999999999998 799
Q ss_pred EeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCccee
Q 017194 164 SGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNI 243 (375)
Q Consensus 164 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 243 (375)
+++.|+.|++||. +++.+..+.. |...|.+++|+| ++++|++++.|+.|++||... +..
T Consensus 361 ~~~~dg~v~~~~~-~~~~~~~~~~-------------~~~~v~~~~~s~------dg~~l~~~~~d~~v~~~~~~~-~~~ 419 (577)
T 2ymu_A 361 SASDDKTVKLWNR-NGQLLQTLTG-------------HSSSVRGVAFSP------DGQTIASASDDKTVKLWNRNG-QLL 419 (577)
T ss_dssp EEETTSEEEEEET-TCCEEEEEEC-------------CSSCEEEEEECT------TSSCEEEEETTSEEEEECTTC-CEE
T ss_pred EEeCCCEEEEEcC-CCCEEEEecC-------------CCCCeEEEEECC------CCCEEEEEeCCCEEEEEeCCC-CEE
Confidence 9999999999995 4666666653 467899999999 899999999999999999653 332
Q ss_pred ecccccCCCCCCceeecccccceeeee---eeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEE
Q 017194 244 SRSKSTTKPLKGSQSTSKVNIRDAEME---ILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 320 (375)
Q Consensus 244 ~~~~~~~~~~~~~~~~s~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iw 320 (375)
... ......+..++|+||++++++.+ ....++ ...+.+..+.+|...|.+++|+ |++++|++++.|+.|++|
T Consensus 420 ~~~-~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~-~~~~~~~~~~~~~~~v~~~~~s---pd~~~las~~~d~~i~iw 494 (577)
T 2ymu_A 420 QTL-TGHSSSVWGVAFSPDDQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFS---PDGQTIASASDDKTVKLW 494 (577)
T ss_dssp EEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEE-TTSCEEEEEECCSSCEEEEEEC---TTSCEEEEEETTSEEEEE
T ss_pred EEe-cCCCCCeEEEEECCCCCEEEEEcCCCEEEEEE-CCCCEEEEEcCCCCCEEEEEEc---CCCCEEEEEeCCCEEEEE
Confidence 222 23445677899999999988632 111111 1234556788999999999999 999999999999999999
Q ss_pred eCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEec
Q 017194 321 DCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
|... +.+..+.+|...|++++|+| ++++|++++.||.|++||.
T Consensus 495 ~~~~----------~~~~~~~~h~~~v~~l~~s~-dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 495 NRNG----------QLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp ETTS----------CEEEEEECCSSCEEEEEECT-TSSCEEEEETTSEEEEECT
T ss_pred cCCC----------CEEEEEeCCCCCEEEEEEcC-CCCEEEEEECcCEEEEEeC
Confidence 9644 55667789999999999999 9999999999999999986
No 20
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3e-46 Score=314.03 Aligned_cols=285 Identities=17% Similarity=0.279 Sum_probs=251.4
Q ss_pred eeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCcee---eEee--ecCccEEEEEEeCCCCeEEEEcCCCeEEE
Q 017194 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQ---LVTD--VGNGPVTSLCFKSGNEDIIYVSSGKEVKS 84 (375)
Q Consensus 10 ~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~---~~~~--~~~~~v~~l~~~~~~~~l~~~~~d~~i~i 84 (375)
...+|.++|++++|+|+ +++|++++ ||.|++||+.+++.. ..+. .|...|.+++|+|++++|++++.|+.|++
T Consensus 46 ~~~~h~~~v~~~~~~~~-~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 123 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNP-TRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSI 123 (337)
T ss_dssp EEECCSSCCCEEEECSS-SSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEE
T ss_pred eeccCCCceEEEEEecC-CcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 34579999999999999 89999999 999999999877643 3333 68999999999999999999999999999
Q ss_pred EECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEE
Q 017194 85 FDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVIS 164 (375)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 164 (375)
||+.+++. .....+..|...|.+++|+|+++++++++.||.|++||+++++.+..+. .|...+.+++|+|+++ .+++
T Consensus 124 ~d~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~-~l~~ 200 (337)
T 1gxr_A 124 WDLAAPTP-RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISNDGT-KLWT 200 (337)
T ss_dssp EECCCC---EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSS-EEEE
T ss_pred EECCCCCc-ceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeee-cccCceEEEEECCCCC-EEEE
Confidence 99987642 3445566778899999999999999999999999999999999999998 8999999999999998 7999
Q ss_pred eecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceee
Q 017194 165 GGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNIS 244 (375)
Q Consensus 165 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 244 (375)
++.|+.|++||+++++.+..+. +...+.+++|+| +++++++++.++.|++||+++..
T Consensus 201 ~~~dg~i~~~d~~~~~~~~~~~--------------~~~~v~~~~~s~------~~~~l~~~~~~~~i~~~~~~~~~--- 257 (337)
T 1gxr_A 201 GGLDNTVRSWDLREGRQLQQHD--------------FTSQIFSLGYCP------TGEWLAVGMESSNVEVLHVNKPD--- 257 (337)
T ss_dssp EETTSEEEEEETTTTEEEEEEE--------------CSSCEEEEEECT------TSSEEEEEETTSCEEEEETTSSC---
T ss_pred EecCCcEEEEECCCCceEeeec--------------CCCceEEEEECC------CCCEEEEEcCCCcEEEEECCCCC---
Confidence 9999999999999998887776 347899999999 79999999999999999998742
Q ss_pred cccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCC
Q 017194 245 RSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSR 324 (375)
Q Consensus 245 ~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~ 324 (375)
...+..|...|.+++|+ |++++|++++.||.|++||+.+
T Consensus 258 --------------------------------------~~~~~~~~~~v~~~~~~---~~~~~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 258 --------------------------------------KYQLHLHESCVLSLKFA---YCGKWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp --------------------------------------EEEECCCSSCEEEEEEC---TTSSEEEEEETTSEEEEEETTT
T ss_pred --------------------------------------eEEEcCCccceeEEEEC---CCCCEEEEecCCCcEEEEECCC
Confidence 12566788999999999 9999999999999999999999
Q ss_pred ceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEec
Q 017194 325 FQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
++. + ....|...+.+++|+| ++++|++++.||.|++|++
T Consensus 297 ~~~---------~-~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 297 GAS---------I-FQSKESSSVLSCDISV-DDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp CCE---------E-EEEECSSCEEEEEECT-TSCEEEEEETTSCEEEEEE
T ss_pred CeE---------E-EEecCCCcEEEEEECC-CCCEEEEecCCCeEEEEEE
Confidence 742 2 3346889999999999 9999999999999999996
No 21
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-46 Score=316.63 Aligned_cols=289 Identities=11% Similarity=0.142 Sum_probs=253.2
Q ss_pred CCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEE
Q 017194 7 KPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFD 86 (375)
Q Consensus 7 ~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd 86 (375)
....|.+|.+.|++++|+|+ +++|++++.||.|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.|++||
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 102 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKE-GDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWD 102 (369)
T ss_dssp EEEEEECCSSCEEEEEECTT-SCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred ccEEEEEeeceEEEEEEcCC-CCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 34568999999999999998 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCC-----CcEEEEeCcCce-----------eeeeEecCccc--c
Q 017194 87 VHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDG-----GDVKIIDIRQHC-----------LYKSLRAGHSS--I 148 (375)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~-----------~~~~~~~~~~~--~ 148 (375)
+.+++....+. +...+.+++|+|+++++++++.+ +.|++||+.... ....+. .|.. .
T Consensus 103 ~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 177 (369)
T 3zwl_B 103 VSNGQCVATWK----SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKII-THEGLDA 177 (369)
T ss_dssp TTTCCEEEEEE----CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEE-CCTTCCC
T ss_pred CCCCcEEEEee----cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeecc-CCcCccc
Confidence 99876544443 57899999999999999999998 999999998653 333444 5555 8
Q ss_pred eeEEEEeeCCCcEEEEeecCCeEEEeeCCC-CCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe
Q 017194 149 CSSVQFIPWKPWEVISGGLDSKLVMWDFSK-GRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK 227 (375)
Q Consensus 149 v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~ 227 (375)
+.+++|+|+++ .+++++.||.|++||+++ ++.+..+.. +...|.+++|+| ++++|++++
T Consensus 178 ~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------------~~~~v~~~~~~~------~~~~l~~~~ 237 (369)
T 3zwl_B 178 ATVAGWSTKGK-YIIAGHKDGKISKYDVSNNYEYVDSIDL-------------HEKSISDMQFSP------DLTYFITSS 237 (369)
T ss_dssp EEEEEECGGGC-EEEEEETTSEEEEEETTTTTEEEEEEEC-------------CSSCEEEEEECT------TSSEEEEEE
T ss_pred eeEEEEcCCCC-EEEEEcCCCEEEEEECCCCcEeEEEEec-------------CCCceeEEEECC------CCCEEEEec
Confidence 99999999998 799999999999999998 566666653 467899999999 799999999
Q ss_pred cCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcE
Q 017194 228 GDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKY 307 (375)
Q Consensus 228 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~ 307 (375)
.||.|++||+++.. ....+. +...+..++|+ |++++
T Consensus 238 ~d~~i~v~d~~~~~----------------------------------------~~~~~~-~~~~~~~~~~~---~~~~~ 273 (369)
T 3zwl_B 238 RDTNSFLVDVSTLQ----------------------------------------VLKKYE-TDCPLNTAVIT---PLKEF 273 (369)
T ss_dssp TTSEEEEEETTTCC----------------------------------------EEEEEE-CSSCEEEEEEC---SSSSE
T ss_pred CCceEEEEECCCCc----------------------------------------eeeeec-CCCCceeEEec---CCCce
Confidence 99999999998742 222232 57789999999 99999
Q ss_pred EEEecCCC--------------eEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEe
Q 017194 308 LISGGNDK--------------LVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYS 373 (375)
Q Consensus 308 l~s~~~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~ 373 (375)
+++++.++ .+++||..++ +.+..+.+|...|.+++|+| ++++|++++.||.|++|+
T Consensus 274 l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~---------~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~v~iw~ 343 (369)
T 3zwl_B 274 IILGGGQEAKDVTTTSANEGKFEARFYHKIFE---------EEIGRVQGHFGPLNTVAISP-QGTSYASGGEDGFIRLHH 343 (369)
T ss_dssp EEEEECCC-------------CEEEEEETTTC---------CEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEE
T ss_pred EEEeecCCCceEEEEecCCCcceeEEEecCCC---------cchhheecccCcEEEEEECC-CCCEEEEEcCCCeEEEEE
Confidence 99999888 8999999998 55667788999999999999 999999999999999999
Q ss_pred cC
Q 017194 374 IS 375 (375)
Q Consensus 374 ~~ 375 (375)
++
T Consensus 344 ~~ 345 (369)
T 3zwl_B 344 FE 345 (369)
T ss_dssp EC
T ss_pred Cc
Confidence 74
No 22
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-46 Score=326.77 Aligned_cols=335 Identities=11% Similarity=0.058 Sum_probs=269.5
Q ss_pred Ceeee--cCCCceeEEEEecCCCC-EEEEeCCCCcEEEEec----ccCc------eeeEeee----------cCccEEEE
Q 017194 8 PRRLR--GHKATATCCIASRDRPG-FVASSGEDGCICWFDL----RSKD------VQLVTDV----------GNGPVTSL 64 (375)
Q Consensus 8 ~~~l~--~h~~~i~~~~~~~~~~~-~l~s~~~d~~i~iw~~----~~~~------~~~~~~~----------~~~~v~~l 64 (375)
.+.+. .|.++|++++|+|+ ++ +||+|+.||.|++|++ .+++ ....+.. |...|.++
T Consensus 36 ~~~~~~~~~~~~v~~~~~s~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (425)
T 1r5m_A 36 VKILKEIVKLDNIVSSTWNPL-DESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCL 114 (425)
T ss_dssp CEECEEEEECSCCSEEEECSS-CTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEE
T ss_pred hhheeeeeccCceEEEEECCC-CCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEE
Confidence 34444 45699999999999 77 9999999999999999 8887 4555544 67899999
Q ss_pred EEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecC
Q 017194 65 CFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAG 144 (375)
Q Consensus 65 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 144 (375)
+|+|++++|++++.|+.|++||.. + ..+..+..|...|.+++|+|++++|++++.|+.|++||+.+++.+..+. .
T Consensus 115 ~~s~~~~~l~~~~~dg~i~i~~~~-~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~ 189 (425)
T 1r5m_A 115 AWSHDGNSIVTGVENGELRLWNKT-G---ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFE-L 189 (425)
T ss_dssp EECTTSSEEEEEETTSCEEEEETT-S---CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEEC-C
T ss_pred EEcCCCCEEEEEeCCCeEEEEeCC-C---CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEee-c
Confidence 999999999999999999999933 3 4455566789999999999999999999999999999999999988888 6
Q ss_pred cccc---------------eeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEe
Q 017194 145 HSSI---------------CSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIA 209 (375)
Q Consensus 145 ~~~~---------------v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 209 (375)
+... +.+++|+|++ .+++++.++.|++||+++++.+..+.. +...+.+++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~~~~~~~~-------------~~~~i~~~~ 254 (425)
T 1r5m_A 190 KETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKTPTGKLIG-------------HHGPISVLE 254 (425)
T ss_dssp C---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSSCSEEECC-------------CSSCEEEEE
T ss_pred cccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCceeeeecc-------------CCCceEEEE
Confidence 7666 9999999986 689999999999999999988877763 467899999
Q ss_pred ecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeee---eeeecCCcceeEeeeee
Q 017194 210 IPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEM---EILDQSGGKRLHLDYSV 286 (375)
Q Consensus 210 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~---~~~~~~~~~~~~~~~~~ 286 (375)
|+| ++++|++++.||.|++||+++.+....... ....+..+.++|++ .+++. +....++....+.+..+
T Consensus 255 ~~~------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~ 326 (425)
T 1r5m_A 255 FND------TNKLLLSASDDGTLRIWHGGNGNSQNCFYG-HSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALS 326 (425)
T ss_dssp EET------TTTEEEEEETTSCEEEECSSSBSCSEEECC-CSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ECC------CCCEEEEEcCCCEEEEEECCCCccceEecC-CCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEec
Confidence 999 799999999999999999998765554432 34567889999999 55542 22223333344566677
Q ss_pred cCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeee-----------cchhhhhhhhccccc--ceeeeeec
Q 017194 287 GGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT-----------SINNDLLIKNINLNK--KVNWLCTT 353 (375)
Q Consensus 287 ~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-----------~~~~~~~~~~~~~~~--~v~~~~~~ 353 (375)
..|...|.+++|+ |++++|++++.||.|++||+.+...... ....+.+..+.+|.. .|.+++|+
T Consensus 327 ~~~~~~i~~~~~s---~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 403 (425)
T 1r5m_A 327 IVDGVPIFAGRIS---QDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWN 403 (425)
T ss_dssp ECTTCCEEEEEEC---TTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEEC
T ss_pred ccCCccEEEEEEc---CCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEcc
Confidence 8899999999999 9999999999999999999988631000 000015566777866 99999999
Q ss_pred CCCCCcEEEeeCCCeEEEEecC
Q 017194 354 PTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 354 ~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
| ++++|++++.||.|++|+++
T Consensus 404 ~-~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 404 C-AGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp T-TSSEEEEEESSSCCEEEECC
T ss_pred C-CCceEEEEecCceEEEEeec
Confidence 9 99999999999999999985
No 23
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-46 Score=308.29 Aligned_cols=287 Identities=15% Similarity=0.282 Sum_probs=252.7
Q ss_pred CCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEE
Q 017194 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKS 84 (375)
Q Consensus 5 ~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~i 84 (375)
.+..+.+++|.+.|++++| |+ +++|++|+.||.|++||+.+++....+..|...|.+++|+|++++|++++.|+.|++
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~-~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VD-DSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING 85 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EE-TTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred HHHHHHhhCCCCCcEEEEe-cC-CCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence 3567789999999999999 87 789999999999999999999989999999999999999999999999999999999
Q ss_pred EECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEee-CCCcEEE
Q 017194 85 FDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIP-WKPWEVI 163 (375)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~ 163 (375)
|++........+..+..|...|.++.| +++++++++.|+.|++|| .++....+. .|...+.+++|.| +++ .++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~-~~~~~v~~~~~~~~~~~-~l~ 159 (313)
T 3odt_A 86 VPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQ-AHNASVWDAKVVSFSEN-KFL 159 (313)
T ss_dssp EETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEE-CCSSCEEEEEEEETTTT-EEE
T ss_pred EEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecc-cCCCceeEEEEccCCCC-EEE
Confidence 999876666677778889999999999 577999999999999999 677788888 8999999999999 666 899
Q ss_pred EeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCccee
Q 017194 164 SGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNI 243 (375)
Q Consensus 164 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 243 (375)
+++.|+.|++|| ..+....+... +...+.+++++| ++. +++++.||.|++||++++
T Consensus 160 ~~~~d~~i~i~d--~~~~~~~~~~~------------~~~~i~~~~~~~------~~~-~~~~~~dg~i~i~d~~~~--- 215 (313)
T 3odt_A 160 TASADKTIKLWQ--NDKVIKTFSGI------------HNDVVRHLAVVD------DGH-FISCSNDGLIKLVDMHTG--- 215 (313)
T ss_dssp EEETTSCEEEEE--TTEEEEEECSS------------CSSCEEEEEEEE------TTE-EEEEETTSEEEEEETTTC---
T ss_pred EEECCCCEEEEe--cCceEEEEecc------------CcccEEEEEEcC------CCe-EEEccCCCeEEEEECCch---
Confidence 999999999999 34555555543 467899999999 566 999999999999999874
Q ss_pred ecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCC
Q 017194 244 SRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCS 323 (375)
Q Consensus 244 ~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~ 323 (375)
+.+..+.+|...|.+++|+ |++ .|++++.||.|++||+.
T Consensus 216 -------------------------------------~~~~~~~~~~~~i~~~~~~---~~~-~l~~~~~dg~v~iwd~~ 254 (313)
T 3odt_A 216 -------------------------------------DVLRTYEGHESFVYCIKLL---PNG-DIVSCGEDRTVRIWSKE 254 (313)
T ss_dssp -------------------------------------CEEEEEECCSSCEEEEEEC---TTS-CEEEEETTSEEEEECTT
T ss_pred -------------------------------------hhhhhhhcCCceEEEEEEe---cCC-CEEEEecCCEEEEEECC
Confidence 3445677899999999999 888 68999999999999999
Q ss_pred CceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 324 RFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
++ +.+..+..|...|.+++|+| +++ +++++.||.|++|+++
T Consensus 255 ~~---------~~~~~~~~~~~~i~~~~~~~-~~~-~~~~~~dg~i~iw~~~ 295 (313)
T 3odt_A 255 NG---------SLKQVITLPAISIWSVDCMS-NGD-IIVGSSDNLVRIFSQE 295 (313)
T ss_dssp TC---------CEEEEEECSSSCEEEEEECT-TSC-EEEEETTSCEEEEESC
T ss_pred CC---------ceeEEEeccCceEEEEEEcc-CCC-EEEEeCCCcEEEEeCC
Confidence 98 55567778889999999999 877 7789999999999974
No 24
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.9e-46 Score=320.84 Aligned_cols=310 Identities=10% Similarity=0.053 Sum_probs=248.2
Q ss_pred CCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEee--ecCccEEEEEEeC-CCCeEEEEcCCCe
Q 017194 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTD--VGNGPVTSLCFKS-GNEDIIYVSSGKE 81 (375)
Q Consensus 5 ~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~l~~~~-~~~~l~~~~~d~~ 81 (375)
....+.+.+|.+.|++++|+|++.++|++|+.||.|++||+.+++....+. +|...|.+++|+| ++++|++++.|+.
T Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~ 142 (383)
T 3ei3_B 63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGA 142 (383)
T ss_dssp CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTE
T ss_pred cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCE
Confidence 345668889999999999999933899999999999999999888777765 5999999999999 7799999999999
Q ss_pred EEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcE
Q 017194 82 VKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWE 161 (375)
Q Consensus 82 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 161 (375)
|++||+.+ .....+.....|...|.+++|+|++++|++++.|+.|++||+ +++.+..+. +|...|.+++|+|+++++
T Consensus 143 i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~-~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 143 TTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEK-LHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp EEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEE-CSSSCEEEEEECSSCTTE
T ss_pred EEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEec-cCCCcEEEEEECCCCCCE
Confidence 99999985 344555555556688999999999999999999999999999 577888888 899999999999999867
Q ss_pred EEEeecCCeEEEeeCCC----CCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeC
Q 017194 162 VISGGLDSKLVMWDFSK----GRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINI 237 (375)
Q Consensus 162 l~~~~~d~~i~~wd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 237 (375)
+++++.|+.|++||+++ +..+..+. +...+.+++|+|. ++++|++++.|+.|++||+
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--------------~~~~v~~~~~s~~-----~~~~l~~~~~d~~i~iwd~ 280 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSYIAEMP--------------HEKPVNAAYFNPT-----DSTKLLTTDQRNEIRVYSS 280 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCEEEEEE--------------CSSCEEEEEECTT-----TSCEEEEEESSSEEEEEET
T ss_pred EEEEeCCCEEEEEeCCCCCcccceEEEec--------------CCCceEEEEEcCC-----CCCEEEEEcCCCcEEEEEC
Confidence 99999999999999998 44444443 5689999999883 5899999999999999999
Q ss_pred CCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeE
Q 017194 238 ESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLV 317 (375)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i 317 (375)
++................ ....+...-.....+..++|+ |++++ +++.||.|
T Consensus 281 ~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~p~~~~~~~~~s---~dg~~--s~s~d~~i 332 (383)
T 3ei3_B 281 YDWSKPDQIIIHPHRQFQ-----------------------HLTPIKATWHPMYDLIVAGRY---PDDQL--LLNDKRTI 332 (383)
T ss_dssp TBTTSCSEEEECCBCCCT-----------------------TSCCCCCEECSSSSEEEEECB---CCTTT--CTTCCCCE
T ss_pred CCCccccccccccccccc-----------------------cccceEEeccCCCCceEEEec---CCccc--ccCCCCeE
Confidence 986544322211100000 000000000113456668888 88888 89999999
Q ss_pred EEEeCCCceeeeecchhhhhhhhcc--cccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 318 KVWDCSRFQGVQTSINNDLLIKNIN--LNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 318 ~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
++||+.++ +.+..+.+ |...+..++|+| ++++|++++ ||.|++|+++
T Consensus 333 ~iwd~~~~---------~~~~~l~~~~~~~~~~~~~~s~-~g~~l~s~s-d~~i~iw~~~ 381 (383)
T 3ei3_B 333 DIYDANSG---------GLVHQLRDPNAAGIISLNKFSP-TGDVLASGM-GFNILIWNRE 381 (383)
T ss_dssp EEEETTTC---------CEEEEECBTTBCSCCCEEEECT-TSSEEEEEE-TTEEEEEECC
T ss_pred EEEecCCC---------ceeeeecCCCCCceEEEEEEec-CccEEEEec-CCcEEEEecC
Confidence 99999998 44445554 567777789999 999999997 9999999985
No 25
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.1e-46 Score=317.56 Aligned_cols=299 Identities=10% Similarity=0.079 Sum_probs=247.5
Q ss_pred eeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCc--eeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEEC
Q 017194 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKD--VQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDV 87 (375)
Q Consensus 10 ~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~ 87 (375)
.+..|.++|++++|+|+ +++|++++.|+.|++||+.+++ .+..+..|...|.+++|+|++++|++++.|+.|++||+
T Consensus 3 ~~~~~~~~i~~~~~s~~-~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKD-RTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 81 (372)
T ss_dssp EEESCSSCCCEEEECTT-SSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred eecccCCCeEEEEECCC-CCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEEC
Confidence 45679999999999999 8999999999999999999887 78889999999999999999999999999999999999
Q ss_pred CCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCcee---eeeEecCcccceeEEEEeeCCCcEEEE
Q 017194 88 HMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCL---YKSLRAGHSSICSSVQFIPWKPWEVIS 164 (375)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~ 164 (375)
++++. ........|...|.+++|+|++++|++++.|+.|++||++.++. ...+...|...|.+++|+|++. +|++
T Consensus 82 ~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~ 159 (372)
T 1k8k_C 82 KGRTW-KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV-LLAA 159 (372)
T ss_dssp ETTEE-EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS-EEEE
T ss_pred CCCee-eeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC-EEEE
Confidence 86542 22333455788999999999999999999999999999987752 3344337889999999999998 7999
Q ss_pred eecCCeEEEeeCC------------------CCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEE
Q 017194 165 GGLDSKLVMWDFS------------------KGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVA 226 (375)
Q Consensus 165 ~~~d~~i~~wd~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~ 226 (375)
++.|+.|++||++ .++.+..+. . +...+.+++|+| ++++|+++
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------------~~~~v~~~~~~~------~~~~l~~~ 220 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-S------------SCGWVHGVCFSA------NGSRVAWV 220 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-C------------CSSCEEEEEECS------SSSEEEEE
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecC-C------------CCCeEEEEEECC------CCCEEEEE
Confidence 9999999999965 344444443 2 567899999999 79999999
Q ss_pred ecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCc
Q 017194 227 KGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGK 306 (375)
Q Consensus 227 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~ 306 (375)
+.||.|++||++++ +.+..+..|..+|.+++|+ |+++
T Consensus 221 ~~d~~i~i~d~~~~----------------------------------------~~~~~~~~~~~~v~~~~~~---~~~~ 257 (372)
T 1k8k_C 221 SHDSTVCLADADKK----------------------------------------MAVATLASETLPLLAVTFI---TESS 257 (372)
T ss_dssp ETTTEEEEEEGGGT----------------------------------------TEEEEEECSSCCEEEEEEE---ETTE
T ss_pred eCCCEEEEEECCCC----------------------------------------ceeEEEccCCCCeEEEEEe---cCCC
Confidence 99999999999864 2344667888899999999 8999
Q ss_pred EEEEecCCCeEEEEeCCC--ceeee--ec---------------------chhhh-------hhhhcccccceeeeeecC
Q 017194 307 YLISGGNDKLVKVWDCSR--FQGVQ--TS---------------------INNDL-------LIKNINLNKKVNWLCTTP 354 (375)
Q Consensus 307 ~l~s~~~dg~i~iwd~~~--~~~~~--~~---------------------~~~~~-------~~~~~~~~~~v~~~~~~~ 354 (375)
+|++| .|+.|++|++.. ++... .. ..... .....+|...|++++|++
T Consensus 258 ~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 336 (372)
T 1k8k_C 258 LVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLS 336 (372)
T ss_dssp EEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEE
T ss_pred EEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEec
Confidence 88888 899999999988 42110 00 00001 112248999999999887
Q ss_pred CCC---CcEEEeeCCCeEEEEec
Q 017194 355 TES---ENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 355 ~~~---~~l~s~~~dg~v~iw~~ 374 (375)
.+| ++|++++.||.|++|++
T Consensus 337 ~~g~~~~~l~s~~~Dg~i~~W~~ 359 (372)
T 1k8k_C 337 GGKAKCSQFCTTGMDGGMSIWDV 359 (372)
T ss_dssp STTTSCSEEEEEETTSEEEEEEH
T ss_pred CCCcceeeEEEecCCCceEEEEe
Confidence 687 99999999999999997
No 26
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.9e-47 Score=328.24 Aligned_cols=332 Identities=16% Similarity=0.186 Sum_probs=259.3
Q ss_pred CCCCCeee-ecCCCceeEEEEec-CCCCEEEEeCCCCcEEEEeccc---Cce---eeEeeecCccEEEEEEeCCCCeEEE
Q 017194 4 AEAKPRRL-RGHKATATCCIASR-DRPGFVASSGEDGCICWFDLRS---KDV---QLVTDVGNGPVTSLCFKSGNEDIIY 75 (375)
Q Consensus 4 ~~~~~~~l-~~h~~~i~~~~~~~-~~~~~l~s~~~d~~i~iw~~~~---~~~---~~~~~~~~~~v~~l~~~~~~~~l~~ 75 (375)
+++.+.++ ++|.++|++++|+| + +++||+|+.||+|+|||+.+ +.. ...+ .|...|.+++|+|++++|++
T Consensus 51 ~g~~~~~~~~~h~~~V~~~~~s~~~-~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s 128 (437)
T 3gre_A 51 RGKLIATLMENEPNSITSSAVSPGE-TPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAV 128 (437)
T ss_dssp CCCEEEEECTTTTSCEEEEEEECSS-SCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEE
T ss_pred cceEEeeeccCCCCceEEEEECCCC-CCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEE
Confidence 45667788 89999999999999 7 89999999999999999987 432 2233 58999999999999999999
Q ss_pred EcCCCeEEEEECC---CCCccccc-----cccc--C--CCcceeEEE--EcCCCCeEEEEeCCCcEEEEeCcCceeeeeE
Q 017194 76 VSSGKEVKSFDVH---MPASWRPL-----ESYN--Y--NKEEINQIV--CNPKSSFLACADDGGDVKIIDIRQHCLYKSL 141 (375)
Q Consensus 76 ~~~d~~i~iwd~~---~~~~~~~~-----~~~~--~--~~~~v~~~~--~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 141 (375)
++.|+.|++||++ +++..... ..+. . +...+.++. +++++++|++++.|+.|++||+++++.+..+
T Consensus 129 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 208 (437)
T 3gre_A 129 SSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQII 208 (437)
T ss_dssp EETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEE
Confidence 9999999999995 33222111 1111 1 345666666 5678999999999999999999999999999
Q ss_pred ecC--cccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCC
Q 017194 142 RAG--HSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKT 219 (375)
Q Consensus 142 ~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 219 (375)
. . |...|++++|+|++. +|++++.||.|++||+++++++..+... +...|.+++++|. ++++
T Consensus 209 ~-~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~------------~~~~v~~~~~~~~--~s~~ 272 (437)
T 3gre_A 209 E-NSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRFNVLIRSWSFG------------DHAPITHVEVCQF--YGKN 272 (437)
T ss_dssp E-CCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTTTEEEEEEBCT------------TCEEEEEEEECTT--TCTT
T ss_pred c-cCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCCccEEEEEecC------------CCCceEEEEeccc--cCCC
Confidence 8 7 889999999999998 7999999999999999999888887654 4578999977652 2237
Q ss_pred CCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecC--CCccEEEEE
Q 017194 220 NKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGG--HTAAASCVA 297 (375)
Q Consensus 220 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~ 297 (375)
+.+|++++.||.|++||+++++........ ...+..+.++|+++.+.. ..+.+ |...|.+++
T Consensus 273 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~---------------~~~~~~~~~~~v~~l~ 336 (437)
T 3gre_A 273 SVIVVGGSSKTFLTIWNFVKGHCQYAFINS-DEQPSMEHFLPIEKGLEE---------------LNFCGIRSLNALSTIS 336 (437)
T ss_dssp EEEEEEESTTEEEEEEETTTTEEEEEEESS-SSCCCGGGGSCBCSSGGG---------------CCCCCCCSGGGGCCEE
T ss_pred ccEEEEEcCCCcEEEEEcCCCcEEEEEEcC-CCCCccceeccccccccc---------------ceecccccCCceEEEE
Confidence 889999999999999999987766554433 345666778888876521 12444 889999999
Q ss_pred EeecCCCCcEEEEecCCCeEEEEeCCCceeeeecc----------------------------hhhhhhhhcccccceee
Q 017194 298 FSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSI----------------------------NNDLLIKNINLNKKVNW 349 (375)
Q Consensus 298 ~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~v~~ 349 (375)
|+ ++++|++|+.||.|++||+.+++...... ..........|...|++
T Consensus 337 ~~----~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~ 412 (437)
T 3gre_A 337 VS----NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINS 412 (437)
T ss_dssp EE----TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEE
T ss_pred EC----CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceee
Confidence 98 56899999999999999999885432110 01111223348999999
Q ss_pred eeecCC-CCCcEEEeeCCCeEEEEe
Q 017194 350 LCTTPT-ESENLVVCDTSKVVKVYS 373 (375)
Q Consensus 350 ~~~~~~-~~~~l~s~~~dg~v~iw~ 373 (375)
++|++. ++.+|++|+.||.|+||+
T Consensus 413 i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 413 ISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEESSSSEEEEEEETTSCEEEEC
T ss_pred EeeeccCCceEEEEEcCCceEEEeC
Confidence 999983 277999999999999995
No 27
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-47 Score=326.54 Aligned_cols=318 Identities=9% Similarity=0.041 Sum_probs=238.5
Q ss_pred CeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccC--ceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEE
Q 017194 8 PRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSK--DVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSF 85 (375)
Q Consensus 8 ~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~--~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iw 85 (375)
...++.|.++|++++|+|+ +++||+|+.|+.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 4 ~~~~~~~~~~v~~~~~s~~-g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vw 82 (377)
T 3dwl_C 4 SQVLHILPKPSYEHAFNSQ-RTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVY 82 (377)
T ss_dssp EEEEEECSSCCSCCEECSS-SSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC
T ss_pred ceeEecCCCcEEEEEECCC-CCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 3456668899999999998 899999999999999999988 7788899999999999999999999999999999999
Q ss_pred ECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCce---eeeeEecC-cccceeEEEEeeCCCcE
Q 017194 86 DVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHC---LYKSLRAG-HSSICSSVQFIPWKPWE 161 (375)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~-~~~~v~~~~~~~~~~~~ 161 (375)
|+.+++.......+..|...|.+++|+|++++|++++.|+.|++||+++++ ....+. . |...|.+++|+|+++ +
T Consensus 83 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~-~ 160 (377)
T 3dwl_C 83 EKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLK-RPLRSTILSLDWHPNNV-L 160 (377)
T ss_dssp ------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEEC-SSCCSCEEEEEECTTSS-E
T ss_pred EcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEee-cccCCCeEEEEEcCCCC-E
Confidence 999766445566677789999999999999999999999999999999876 467777 6 999999999999998 7
Q ss_pred EEEeecCCeEEEeeCCCCCcceEEecCCCCCC---C-CCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeC
Q 017194 162 VISGGLDSKLVMWDFSKGRPNKIVNFGLPENN---G-NAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINI 237 (375)
Q Consensus 162 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 237 (375)
|++++.|+.|++||++..+............. . ......|...|.+++|+| ++++|++++.||.|++||+
T Consensus 161 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp------~~~~l~~~~~d~~i~iwd~ 234 (377)
T 3dwl_C 161 LAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSP------SGNALAYAGHDSSVTIAYP 234 (377)
T ss_dssp EEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECT------TSSCEEEEETTTEEC-CEE
T ss_pred EEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECC------CCCEEEEEeCCCcEEEEEC
Confidence 99999999999999964331110000000000 0 000002678899999999 7999999999999999999
Q ss_pred CCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeE
Q 017194 238 ESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLV 317 (375)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i 317 (375)
.++... ...+..+.+|...|.+++|+ |++++|++++.|+.+
T Consensus 235 ~~~~~~------------------------------------~~~~~~~~~~~~~v~~~~~s---~~~~~l~~~~~~~~~ 275 (377)
T 3dwl_C 235 SAPEQP------------------------------------PRALITVKLSQLPLRSLLWA---NESAIVAAGYNYSPI 275 (377)
T ss_dssp CSTTSC------------------------------------EEECCCEECSSSCEEEEEEE---ETTEEEEEESSSSEE
T ss_pred CCCCCc------------------------------------ceeeEeecCCCCceEEEEEc---CCCCEEEEEcCCcEE
Confidence 975321 12355778899999999999 899999999887766
Q ss_pred EEEeCCCcee-ee-ecc------h-------------h---------h-------------hhhhhcccccceeeeeecC
Q 017194 318 KVWDCSRFQG-VQ-TSI------N-------------N---------D-------------LLIKNINLNKKVNWLCTTP 354 (375)
Q Consensus 318 ~iwd~~~~~~-~~-~~~------~-------------~---------~-------------~~~~~~~~~~~v~~~~~~~ 354 (375)
+|+...... .. ... . . . .......|...|+++++.+
T Consensus 276 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~ 354 (377)
T 3dwl_C 276 -LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYA 354 (377)
T ss_dssp -EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEE
T ss_pred -EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccC
Confidence 666552210 00 000 0 0 0 0011223999999999877
Q ss_pred CCCC---cEEEeeCCCeEEEEec
Q 017194 355 TESE---NLVVCDTSKVVKVYSI 374 (375)
Q Consensus 355 ~~~~---~l~s~~~dg~v~iw~~ 374 (375)
.++. .|+|++.||.|++||+
T Consensus 355 ~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 355 GTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp EETTEEEEEEEEETTSEEEEECC
T ss_pred CCCCceEEEEeecCCCcEEEecC
Confidence 4444 6999999999999986
No 28
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.4e-46 Score=321.89 Aligned_cols=308 Identities=14% Similarity=0.135 Sum_probs=248.9
Q ss_pred CCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCc------eeeEeeecCccEEEEEEeCC----C---CeE
Q 017194 7 KPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKD------VQLVTDVGNGPVTSLCFKSG----N---EDI 73 (375)
Q Consensus 7 ~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~------~~~~~~~~~~~v~~l~~~~~----~---~~l 73 (375)
..+.+++|.++|++++|+| ++|++|+.||.|++|++.+++ .+..+..|...|.+++|+|+ + ++|
T Consensus 8 ~~~~~~~h~~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEEESSCSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC---CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEE
Confidence 4567789999999999987 599999999999999999988 78888899999999999999 9 999
Q ss_pred EEEcCCCeEEEEECCCCCccc--ccccccCC-----CcceeEEEEc----CCCCe-EEEEeCCCcEEEEeCcC------c
Q 017194 74 IYVSSGKEVKSFDVHMPASWR--PLESYNYN-----KEEINQIVCN----PKSSF-LACADDGGDVKIIDIRQ------H 135 (375)
Q Consensus 74 ~~~~~d~~i~iwd~~~~~~~~--~~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~dg~i~iwd~~~------~ 135 (375)
++++.|+.|++||+.+++... .+..+..| ...|.+++|+ |++++ |++++.||.|++||+++ +
T Consensus 85 ~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 85 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 999999999999998755310 14445555 5899999999 99999 99999999999999998 7
Q ss_pred eeee-----eEe------cCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccC---
Q 017194 136 CLYK-----SLR------AGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYN--- 201 (375)
Q Consensus 136 ~~~~-----~~~------~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~--- 201 (375)
+.+. .+. ..|...|.+++|+|++ ++++++.|+.|++||+++++.+..+... ..|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~----------~~h~~~ 232 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQ----------HSMINN 232 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEECC----------C---CC
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEEecc----------cccccc
Confidence 6666 664 1488999999999998 6999999999999999999888887640 002
Q ss_pred CCceeEEeecCCccccCCCCEEEEEecC---CcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcc
Q 017194 202 PAFVHAIAIPDADMLDKTNKICVVAKGD---GVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGK 278 (375)
Q Consensus 202 ~~~v~~~~~~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~ 278 (375)
...+.+++|+| ++++|++++.| |.|++||+++++.......+...
T Consensus 233 ~~~i~~i~~~~------~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~-------------------------- 280 (397)
T 1sq9_A 233 SNSIRSVKFSP------QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHS-------------------------- 280 (397)
T ss_dssp CCCEEEEEECS------STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC-----------------------------
T ss_pred CCccceEEECC------CCCEEEEEecCCCCceEEEEECCCCcccceeccCccc--------------------------
Confidence 47899999999 79999999999 99999999975332211110000
Q ss_pred eeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhc------cc---------
Q 017194 279 RLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNI------NL--------- 343 (375)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~------~~--------- 343 (375)
.........|...|.+++|+ |++++|++++.||.|++||+.+++.. ..+. +|
T Consensus 281 -~~~~~~~~~~~~~v~~~~~~---~~~~~l~~~~~dg~i~iwd~~~~~~~---------~~~~~~~~~~~~~~~~~~g~~ 347 (397)
T 1sq9_A 281 -SQASLGEFAHSSWVMSLSFN---DSGETLCSAGWDGKLRFWDVKTKERI---------TTLNMHCDDIEIEEDILAVDE 347 (397)
T ss_dssp ------CCBSBSSCEEEEEEC---SSSSEEEEEETTSEEEEEETTTTEEE---------EEEECCGGGCSSGGGCCCBCT
T ss_pred -ccccccccccCCcEEEEEEC---CCCCEEEEEeCCCeEEEEEcCCCcee---------EEEecccCcccchhhhhcccc
Confidence 00000111288999999999 99999999999999999999998543 3333 45
Q ss_pred ------ccceeeeeecCCCC----------CcEEEeeCCCeEEEEecC
Q 017194 344 ------NKKVNWLCTTPTES----------ENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 344 ------~~~v~~~~~~~~~~----------~~l~s~~~dg~v~iw~~~ 375 (375)
...|.+++|+| ++ ++|++++.||.|++|+++
T Consensus 348 ~~~~~~~~~v~~~~~~~-~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 348 HGDSLAEPGVFDVKFLK-KGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp TSCBCSSCCEEEEEEEC-TTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred ccccccCCceeEEEecc-ccccccccccccceEEEecCCCcEEEEEcC
Confidence 89999999999 77 799999999999999973
No 29
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.2e-45 Score=338.80 Aligned_cols=300 Identities=17% Similarity=0.260 Sum_probs=242.3
Q ss_pred CeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCc-----eeeEeeecCccEEEEEEeCCCCeEEEEcCCCeE
Q 017194 8 PRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKD-----VQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEV 82 (375)
Q Consensus 8 ~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~-----~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i 82 (375)
...+++|++.|++++|+|+++++|+||+.|++|++|++.+.. ....+.+|...|.+++|+|++++|++++.|+.|
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL 454 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence 456899999999999999867899999999999999997643 356788999999999999999999999999999
Q ss_pred EEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEe--cCcccceeEEEEeeCCC-
Q 017194 83 KSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLR--AGHSSICSSVQFIPWKP- 159 (375)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~- 159 (375)
++||+.++. ....+.+|...|.+++|+|++++|++++.|++|++||+.......... .+|...|.+++|+|++.
T Consensus 455 ~vwd~~~~~---~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 531 (694)
T 3dm0_A 455 RLWDLAAGV---STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ 531 (694)
T ss_dssp EEEETTTTE---EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSS
T ss_pred EEEECCCCc---ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCc
Confidence 999998754 345566789999999999999999999999999999986554332221 16888999999999873
Q ss_pred cEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCC
Q 017194 160 WEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIES 239 (375)
Q Consensus 160 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 239 (375)
..+++++.|++|++||+++++....+. + |...|.+++|+| ++++|++++.||.|++||+++
T Consensus 532 ~~l~s~s~d~~v~vwd~~~~~~~~~~~-~------------h~~~v~~v~~sp------dg~~l~sg~~Dg~i~iwd~~~ 592 (694)
T 3dm0_A 532 PTIVSASWDKTVKVWNLSNCKLRSTLA-G------------HTGYVSTVAVSP------DGSLCASGGKDGVVLLWDLAE 592 (694)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEEC-C------------CSSCEEEEEECT------TSSEEEEEETTSBCEEEETTT
T ss_pred ceEEEEeCCCeEEEEECCCCcEEEEEc-C------------CCCCEEEEEEeC------CCCEEEEEeCCCeEEEEECCC
Confidence 379999999999999999988777765 3 578899999999 899999999999999999997
Q ss_pred cceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEE
Q 017194 240 ELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKV 319 (375)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~i 319 (375)
++ .+..+.. ...|.+++|+ |++.+|++++ |+.|++
T Consensus 593 ~~----------------------------------------~~~~~~~-~~~v~~~~~s---p~~~~l~~~~-~~~i~i 627 (694)
T 3dm0_A 593 GK----------------------------------------KLYSLEA-NSVIHALCFS---PNRYWLCAAT-EHGIKI 627 (694)
T ss_dssp TE----------------------------------------EEECCBC-SSCEEEEEEC---SSSSEEEEEE-TTEEEE
T ss_pred Cc----------------------------------------eEEEecC-CCcEEEEEEc---CCCcEEEEEc-CCCEEE
Confidence 52 2223333 4579999999 8988887765 566999
Q ss_pred EeCCCceeeeecchhh-h---------hhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 320 WDCSRFQGVQTSINND-L---------LIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 320 wd~~~~~~~~~~~~~~-~---------~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
||+.++.......... . ......+...+++++|+| ++++|++|+.||.|++|++.
T Consensus 628 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sp-dg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 628 WDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSA-DGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EETTTTEEEEEECCCCC----------------CCCCEEEEEECT-TSSEEEEEETTSEEEEEEC-
T ss_pred EECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcC-CCCEEEEEcCCCeEEEEecc
Confidence 9999986542211000 0 000111223478899999 99999999999999999974
No 30
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=9e-46 Score=313.69 Aligned_cols=307 Identities=16% Similarity=0.181 Sum_probs=245.8
Q ss_pred eeeecCCCceeEEEEecCCCCEEEEeCC---CCcEEEEecccCceeeEe-eecCccEEEEEEeCC---CCeEEEEcCCCe
Q 017194 9 RRLRGHKATATCCIASRDRPGFVASSGE---DGCICWFDLRSKDVQLVT-DVGNGPVTSLCFKSG---NEDIIYVSSGKE 81 (375)
Q Consensus 9 ~~l~~h~~~i~~~~~~~~~~~~l~s~~~---d~~i~iw~~~~~~~~~~~-~~~~~~v~~l~~~~~---~~~l~~~~~d~~ 81 (375)
..+++|.+.|++++|+|++..++++|+. |+.|++||+.+++..... ..|...|.+++|+|+ +++|++++.|+.
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 4557899999999999994456677776 999999999988865443 368999999999998 699999999999
Q ss_pred EEEEECCCCCcccccccccCCCcceeEEE------EcCCCCeEEEEeCCCcEEEEeCcCce-eeeeEecCccc----cee
Q 017194 82 VKSFDVHMPASWRPLESYNYNKEEINQIV------CNPKSSFLACADDGGDVKIIDIRQHC-LYKSLRAGHSS----ICS 150 (375)
Q Consensus 82 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~------~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~----~v~ 150 (375)
|++||+.+++ ..+..+.+|...|.++. |+|++++|++++.||.|++||+++++ .+..+. .|.. .+.
T Consensus 92 i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~~~~~~v~ 168 (357)
T 3i2n_A 92 LHIWNLEAPE--MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANME-PVQGENKRDCW 168 (357)
T ss_dssp EEEECTTSCS--SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEEC-CCTTSCCCCEE
T ss_pred EEEEeCCCCC--ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecc-ccCCCCCCceE
Confidence 9999998754 24556678899999995 57899999999999999999999886 677776 5544 788
Q ss_pred EEE----EeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEE
Q 017194 151 SVQ----FIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVA 226 (375)
Q Consensus 151 ~~~----~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~ 226 (375)
+++ |+|++. ++++++.|+.|++||+++++...... +...+.+++|+|. ..++.+++++
T Consensus 169 ~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~--------------~~~~v~~~~~~~~---~~~~~~l~~~ 230 (357)
T 3i2n_A 169 TVAFGNAYNQEER-VVCAGYDNGDIKLFDLRNMALRWETN--------------IKNGVCSLEFDRK---DISMNKLVAT 230 (357)
T ss_dssp EEEEECCCC-CCC-EEEEEETTSEEEEEETTTTEEEEEEE--------------CSSCEEEEEESCS---SSSCCEEEEE
T ss_pred EEEEEeccCCCCC-EEEEEccCCeEEEEECccCceeeecC--------------CCCceEEEEcCCC---CCCCCEEEEE
Confidence 888 678888 79999999999999999988755544 4578999999972 1138899999
Q ss_pred ecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCc
Q 017194 227 KGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGK 306 (375)
Q Consensus 227 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~ 306 (375)
+.||.|++||+++...... .....+.+|...|.+++|+ |+++
T Consensus 231 ~~dg~i~i~d~~~~~~~~~-----------------------------------~~~~~~~~~~~~v~~~~~~---~~~~ 272 (357)
T 3i2n_A 231 SLEGKFHVFDMRTQHPTKG-----------------------------------FASVSEKAHKSTVWQVRHL---PQNR 272 (357)
T ss_dssp ESTTEEEEEEEEEEETTTE-----------------------------------EEEEEEECCSSCEEEEEEE---TTEE
T ss_pred CCCCeEEEEeCcCCCcccc-----------------------------------eeeeccCCCcCCEEEEEEC---CCCC
Confidence 9999999999986421100 1112455899999999999 8988
Q ss_pred -EEEEecCCCeEEEEeCCCceeeeec----------chhhhhhhhcccccceeeeeecCCCCCcEE-EeeCCCeEEEEec
Q 017194 307 -YLISGGNDKLVKVWDCSRFQGVQTS----------INNDLLIKNINLNKKVNWLCTTPTESENLV-VCDTSKVVKVYSI 374 (375)
Q Consensus 307 -~l~s~~~dg~i~iwd~~~~~~~~~~----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~dg~v~iw~~ 374 (375)
+|++++.||.|++||+......... ...+.+..+.+|...|.+++|+| ++++|+ +++.||.|++|++
T Consensus 273 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~s~~~d~~i~iw~~ 351 (357)
T 3i2n_A 273 ELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSP-DKRGLCVCSSFDQTVRVLIV 351 (357)
T ss_dssp EEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECS-SSTTEEEEEETTSEEEEEEE
T ss_pred cEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcC-CCCeEEEEecCCCcEEEEEC
Confidence 8999999999999999875322100 00124556778999999999999 899998 8999999999997
Q ss_pred C
Q 017194 375 S 375 (375)
Q Consensus 375 ~ 375 (375)
+
T Consensus 352 ~ 352 (357)
T 3i2n_A 352 T 352 (357)
T ss_dssp C
T ss_pred C
Confidence 4
No 31
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-45 Score=318.07 Aligned_cols=253 Identities=19% Similarity=0.331 Sum_probs=230.5
Q ss_pred cCCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeE
Q 017194 3 DAEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEV 82 (375)
Q Consensus 3 ~~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i 82 (375)
.+++..+++++|.+.|++++|+|+ +++|++|+.|++|++||+.+++++..+.+|...|.+++|+|++++|++++.|++|
T Consensus 138 ~~~~~~~~l~~h~~~V~~v~~~~~-~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i 216 (410)
T 1vyh_C 138 ETGDFERTLKGHTDSVQDISFDHS-GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTI 216 (410)
T ss_dssp TTCCCCEEECCCSSCEEEEEECTT-SSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred CCCcEEEEEeccCCcEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeE
Confidence 356778899999999999999998 8999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeC-----
Q 017194 83 KSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPW----- 157 (375)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~----- 157 (375)
++||++++.. +..+.+|...|.++.++|++++|++++.|+.|++||+.+++....+. +|...|.+++|+|+
T Consensus 217 ~~wd~~~~~~---~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~ 292 (410)
T 1vyh_C 217 KMWEVQTGYC---VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EHRHVVECISWAPESSYSS 292 (410)
T ss_dssp EEEETTTCCE---EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECCSCGGGG
T ss_pred EEEECCCCcE---EEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEec-CCCceEEEEEEcCcccccc
Confidence 9999997643 45566789999999999999999999999999999999999999999 99999999999996
Q ss_pred ---------------CCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCE
Q 017194 158 ---------------KPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKI 222 (375)
Q Consensus 158 ---------------~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 222 (375)
+. +|++|+.|+.|++||+++++++..+.. |...|.+++|+| ++++
T Consensus 293 ~~~~~~~~~~~~~~~g~-~l~sgs~D~~i~iwd~~~~~~~~~~~~-------------h~~~v~~v~~~~------~g~~ 352 (410)
T 1vyh_C 293 ISEATGSETKKSGKPGP-FLLSGSRDKTIKMWDVSTGMCLMTLVG-------------HDNWVRGVLFHS------GGKF 352 (410)
T ss_dssp GGGCCSCC-------CC-EEEEEETTSEEEEEETTTTEEEEEEEC-------------CSSCEEEEEECS------SSSC
T ss_pred hhhhccccccccCCCCC-EEEEEeCCCeEEEEECCCCceEEEEEC-------------CCCcEEEEEEcC------CCCE
Confidence 44 799999999999999999998888763 568899999999 7999
Q ss_pred EEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecC
Q 017194 223 CVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFG 302 (375)
Q Consensus 223 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 302 (375)
|++++.||.|++||+.++ +++..+.+|...|.+++|+
T Consensus 353 l~s~s~D~~i~vwd~~~~----------------------------------------~~~~~~~~h~~~v~~l~~~--- 389 (410)
T 1vyh_C 353 ILSCADDKTLRVWDYKNK----------------------------------------RCMKTLNAHEHFVTSLDFH--- 389 (410)
T ss_dssp EEEEETTTEEEEECCTTS----------------------------------------CCCEEEECCSSCEEEEEEC---
T ss_pred EEEEeCCCeEEEEECCCC----------------------------------------ceEEEEcCCCCcEEEEEEc---
Confidence 999999999999999864 3345678899999999999
Q ss_pred CCCcEEEEecCCCeEEEEeCC
Q 017194 303 ERGKYLISGGNDKLVKVWDCS 323 (375)
Q Consensus 303 ~~~~~l~s~~~dg~i~iwd~~ 323 (375)
|++.+|++|+.||.|++|+++
T Consensus 390 ~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 390 KTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp SSSSCEEEEETTSEEEEEC--
T ss_pred CCCCEEEEEeCCCcEEEEeCC
Confidence 999999999999999999864
No 32
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.5e-45 Score=305.20 Aligned_cols=248 Identities=21% Similarity=0.277 Sum_probs=227.4
Q ss_pred CeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEEC
Q 017194 8 PRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDV 87 (375)
Q Consensus 8 ~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~ 87 (375)
...+.+|...|.+++|+|+ +.++++++.|++|++||+.+++.+..+..|...+.+++|+|++++|++++.++.|++|++
T Consensus 73 ~~~l~gh~~~v~~~~~~~~-~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~ 151 (321)
T 3ow8_A 73 QWSLEGHQLGVVSVDISHT-LPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGV 151 (321)
T ss_dssp EEEECCCSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEET
T ss_pred eeeeccCCCCEEEEEECCC-CCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEc
Confidence 3468899999999999999 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeec
Q 017194 88 HMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGL 167 (375)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 167 (375)
++++.. ..+..|...|.+++|+|++++|++++.||.|++||+++++.+..+. +|..+|.+++|+|+++ +|++++.
T Consensus 152 ~~~~~~---~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~spd~~-~l~s~s~ 226 (321)
T 3ow8_A 152 ESGKKE---YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQ-LLVTASD 226 (321)
T ss_dssp TTCSEE---EEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCCCEEEECTTSC-EEEEECT
T ss_pred CCCcee---EEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc-ccCCceeEEEEcCCCC-EEEEEcC
Confidence 976543 3344567889999999999999999999999999999999999999 9999999999999998 7999999
Q ss_pred CCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeeccc
Q 017194 168 DSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSK 247 (375)
Q Consensus 168 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 247 (375)
|+.|++||+++++....+. + |...|.+++|+| ++++|++++.|+.|++||+.++
T Consensus 227 dg~i~iwd~~~~~~~~~~~-~------------h~~~v~~~~~sp------~~~~l~s~s~D~~v~iwd~~~~------- 280 (321)
T 3ow8_A 227 DGYIKIYDVQHANLAGTLS-G------------HASWVLNVAFCP------DDTHFVSSSSDKSVKVWDVGTR------- 280 (321)
T ss_dssp TSCEEEEETTTCCEEEEEC-C------------CSSCEEEEEECT------TSSEEEEEETTSCEEEEETTTT-------
T ss_pred CCeEEEEECCCcceeEEEc-C------------CCCceEEEEECC------CCCEEEEEeCCCcEEEEeCCCC-------
Confidence 9999999999988877765 3 567899999999 7999999999999999999874
Q ss_pred ccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCC
Q 017194 248 STTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCS 323 (375)
Q Consensus 248 ~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~ 323 (375)
+++..+.+|...|.+++|+ |++++|++++.||.|++||..
T Consensus 281 ---------------------------------~~~~~~~~h~~~v~~v~~s---~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 281 ---------------------------------TCVHTFFDHQDQVWGVKYN---GNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp ---------------------------------EEEEEECCCSSCEEEEEEC---TTSSEEEEEETTCCEEEEECC
T ss_pred ---------------------------------EEEEEEcCCCCcEEEEEEC---CCCCEEEEEeCCCeEEEEeCC
Confidence 4556788999999999999 999999999999999999974
No 33
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.8e-45 Score=304.19 Aligned_cols=255 Identities=14% Similarity=0.202 Sum_probs=221.1
Q ss_pred ceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEE
Q 017194 49 DVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVK 128 (375)
Q Consensus 49 ~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 128 (375)
+..+++.+|.+.|.+++|+|++++|++++.|+.|++||++++. .+..+..|..+|.+++|+|++++|++|+.|+.|+
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV---EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE---EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc---eeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEE
Confidence 4467789999999999999999999999999999999998754 3445566789999999999999999999999999
Q ss_pred EEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEE
Q 017194 129 IIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAI 208 (375)
Q Consensus 129 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 208 (375)
+||+++++.+..+. +|...|.+++|+|+++ +|++|+.|++|++||++++........+ |...|.++
T Consensus 81 vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~~~------------h~~~v~~v 146 (304)
T 2ynn_A 81 VFNYNTGEKVVDFE-AHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALEQTFEG------------HEHFVMCV 146 (304)
T ss_dssp EEETTTCCEEEEEE-CCSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTTEEEEEECC------------CCSCEEEE
T ss_pred EEECCCCcEEEEEe-CCCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCcchhhhhcc------------cCCcEEEE
Confidence 99999999999999 9999999999999998 7999999999999999887554433334 57889999
Q ss_pred eecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecC
Q 017194 209 AIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGG 288 (375)
Q Consensus 209 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (375)
+|+|. ++.+|++|+.|+.|++||+++.... .....+
T Consensus 147 ~~~p~-----~~~~l~sgs~D~~v~iwd~~~~~~~---------------------------------------~~~~~~ 182 (304)
T 2ynn_A 147 AFNPK-----DPSTFASGCLDRTVKVWSLGQSTPN---------------------------------------FTLTTG 182 (304)
T ss_dssp EECTT-----CTTEEEEEETTSEEEEEETTCSSCS---------------------------------------EEEECC
T ss_pred EECCC-----CCCEEEEEeCCCeEEEEECCCCCcc---------------------------------------ceeccC
Confidence 99984 5789999999999999999864211 112235
Q ss_pred CCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCe
Q 017194 289 HTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKV 368 (375)
Q Consensus 289 ~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~ 368 (375)
|...+..+.|+|. +++.+|++|+.|+.|++||++++ +++..+.+|...|.+++|+| ++++|++++.||.
T Consensus 183 ~~~~v~~~~~~~~-~~~~~l~s~s~D~~i~iWd~~~~---------~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~Dg~ 251 (304)
T 2ynn_A 183 QERGVNYVDYYPL-PDKPYMITASDDLTIKIWDYQTK---------SCVATLEGHMSNVSFAVFHP-TLPIIISGSEDGT 251 (304)
T ss_dssp CTTCEEEEEECCS-TTCCEEEEEETTSEEEEEETTTT---------EEEEEEECCSSCEEEEEECS-SSSEEEEEETTSC
T ss_pred CcCcEEEEEEEEc-CCCCEEEEEcCCCeEEEEeCCCC---------ccceeeCCCCCCEEEEEECC-CCCEEEEEcCCCe
Confidence 6678999999842 47889999999999999999998 55667889999999999999 8899999999999
Q ss_pred EEEEecC
Q 017194 369 VKVYSIS 375 (375)
Q Consensus 369 v~iw~~~ 375 (375)
|++||++
T Consensus 252 i~iWd~~ 258 (304)
T 2ynn_A 252 LKIWNSS 258 (304)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 9999974
No 34
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7.1e-46 Score=315.37 Aligned_cols=317 Identities=10% Similarity=0.107 Sum_probs=251.1
Q ss_pred eecCCCceeEEEEecC---CCCEEEEeCCCCcEEEEecccCceeeEeee-----cCccEEEEEEeCC----CCeEEEEcC
Q 017194 11 LRGHKATATCCIASRD---RPGFVASSGEDGCICWFDLRSKDVQLVTDV-----GNGPVTSLCFKSG----NEDIIYVSS 78 (375)
Q Consensus 11 l~~h~~~i~~~~~~~~---~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~-----~~~~v~~l~~~~~----~~~l~~~~~ 78 (375)
..+|.++|++++|+|+ +...+++++.++.|++||+.+++.+..+.. |...|.+++|+|+ +++|++++.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 4589999999999983 345666666677999999998888777764 4578999999998 678999999
Q ss_pred CCeEEEEECCCCCcccccccccCCCcceeEEEEcC-CCCeEEEEeCCCcEEEEeCcCceeeeeE---ecCcccceeEEEE
Q 017194 79 GKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNP-KSSFLACADDGGDVKIIDIRQHCLYKSL---RAGHSSICSSVQF 154 (375)
Q Consensus 79 d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~~v~~~~~ 154 (375)
|+.|++||+.+++. +..+.+|...|.+++|+| ++++|++++.||.|++||+++++.+..+ . .|...|.+++|
T Consensus 94 dg~i~v~d~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~ 169 (366)
T 3k26_A 94 RGIIRIINPITMQC---IKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVE-GHRDEVLSADY 169 (366)
T ss_dssp TCEEEEECTTTCCE---EEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTT-SCSSCEEEEEE
T ss_pred CCEEEEEEchhceE---eeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccc-cccCceeEEEE
Confidence 99999999987543 445667899999999999 8999999999999999999999988888 5 79999999999
Q ss_pred eeCCCcEEEEeecCCeEEEeeCCCCCcceEEecC---CCCCC------------CCCCcccCCCceeEEeecCCccccCC
Q 017194 155 IPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFG---LPENN------------GNAGQCYNPAFVHAIAIPDADMLDKT 219 (375)
Q Consensus 155 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~---~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~~~~ 219 (375)
+|++. .|++++.||.|++||+++++....+... .++.. .......+...|.+++|+
T Consensus 170 ~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-------- 240 (366)
T 3k26_A 170 DLLGE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-------- 240 (366)
T ss_dssp CTTSS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--------
T ss_pred CCCCC-EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--------
Confidence 99998 7999999999999999987654433210 00000 000011156789999995
Q ss_pred CCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEe
Q 017194 220 NKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFS 299 (375)
Q Consensus 220 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 299 (375)
++++++++.||.|++||+.+........... ......+..+..|...|.+++|+
T Consensus 241 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~v~~~~~s 294 (366)
T 3k26_A 241 GDLILSKSCENAIVCWKPGKMEDDIDKIKPS--------------------------ESNVTILGRFDYSQCDIWYMRFS 294 (366)
T ss_dssp TTEEEEECSSSEEEEEEESSTTCCGGGCCTT--------------------------CCCEEEEEEEECSSCCSSCCCCE
T ss_pred CCEEEEEecCCEEEEEeCCCccccccccccC--------------------------CcchheeccccccCCcEEEEEEc
Confidence 5699999999999999998764432221110 12235566788899999999999
Q ss_pred ecCCC--CcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhccc--ccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 300 MFGER--GKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINL--NKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 300 ~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
|+ +++|++|+.||.|++||+.+++... .....+.+| ...|.+++|+| ++++|++++.||.|++||+.
T Consensus 295 ---~~~~~~~l~~~~~dg~i~vwd~~~~~~~~-----~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 295 ---MDFWQKMLALGNQVGKLYVWDLEVEDPHK-----AKCTTLTHHKCGAAIRQTSFSR-DSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp ---ECTTSSEEEEECTTSCEEEEECCSSSGGG-----CEEEEECCTTCCSCEEEEEECT-TSSEEEEEETTSEEEEEEC-
T ss_pred ---CCCCCcEEEEEecCCcEEEEECCCCCCcc-----ccceEEcccccCCceEEEEeCC-CCCeEEEEeCCCEEEEEEec
Confidence 78 9999999999999999999873210 112245566 79999999999 99999999999999999974
No 35
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-46 Score=323.58 Aligned_cols=300 Identities=11% Similarity=0.070 Sum_probs=251.5
Q ss_pred cCCCceeEEEEecCCCCEEEEeCCCCcEEEEeccc----CceeeEeeecCccEEEEEEeCC-CCeEEEEcCCCeEEEEEC
Q 017194 13 GHKATATCCIASRDRPGFVASSGEDGCICWFDLRS----KDVQLVTDVGNGPVTSLCFKSG-NEDIIYVSSGKEVKSFDV 87 (375)
Q Consensus 13 ~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~----~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~d~~i~iwd~ 87 (375)
.|...|++++|+|+ +++|++|+.||.|++|++.+ .+.+..+..|...|.+++|+|+ +++|++++.|+.|++||+
T Consensus 65 ~~~~~v~~~~~s~~-~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 65 QVDSKFNDLDWSHN-NKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CCSSCEEEEEECSS-SSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred ecCCceEEEEECCC-CCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 58899999999999 89999999999999999987 4578888899999999999998 899999999999999999
Q ss_pred CCCC------cccccccccCCCcceeEEEEcCC-CCeEEEEeCCCcEEEEeCcCceeeeeEecCc------ccceeEEEE
Q 017194 88 HMPA------SWRPLESYNYNKEEINQIVCNPK-SSFLACADDGGDVKIIDIRQHCLYKSLRAGH------SSICSSVQF 154 (375)
Q Consensus 88 ~~~~------~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------~~~v~~~~~ 154 (375)
.+++ ....+.....|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+. .+ ...|.+++|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-~~~~~~~~~~~v~~~~~ 222 (416)
T 2pm9_A 144 NKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLS-YTSPNSGIKQQLSVVEW 222 (416)
T ss_dssp TTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEEC-CCCCSSCCCCCEEEEEE
T ss_pred CCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEe-ccccccccCCceEEEEE
Confidence 9765 33344445678899999999998 7899999999999999999999988887 55 789999999
Q ss_pred eeCCCcEEEEeecCC---eEEEeeCCCC-CcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCC
Q 017194 155 IPWKPWEVISGGLDS---KLVMWDFSKG-RPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDG 230 (375)
Q Consensus 155 ~~~~~~~l~~~~~d~---~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg 230 (375)
+|++..++++++.|+ .|++||++++ ++...+... |...|.+++|+|. ++++|++++.||
T Consensus 223 ~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~------------~~~~v~~~~~s~~-----~~~~l~s~~~dg 285 (416)
T 2pm9_A 223 HPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQG------------HQKGILSLDWCHQ-----DEHLLLSSGRDN 285 (416)
T ss_dssp CSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSC------------CSSCEEEEEECSS-----CSSCEEEEESSS
T ss_pred CCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecC------------ccCceeEEEeCCC-----CCCeEEEEeCCC
Confidence 999865899999998 9999999986 444444312 5688999999984 689999999999
Q ss_pred cEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCC-cEEE
Q 017194 231 VVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERG-KYLI 309 (375)
Q Consensus 231 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-~~l~ 309 (375)
.|++||++++ +.+..+.+|...|.+++|+ |++ .+|+
T Consensus 286 ~v~~wd~~~~----------------------------------------~~~~~~~~~~~~v~~~~~s---~~~~~~l~ 322 (416)
T 2pm9_A 286 TVLLWNPESA----------------------------------------EQLSQFPARGNWCFKTKFA---PEAPDLFA 322 (416)
T ss_dssp EEEEECSSSC----------------------------------------CEEEEEECSSSCCCCEEEC---TTCTTEEE
T ss_pred CEEEeeCCCC----------------------------------------ccceeecCCCCceEEEEEC---CCCCCEEE
Confidence 9999999874 3445677899999999999 888 8999
Q ss_pred EecCCCeEEEEeCCCceeeeecch--------hhhh------------------hhhcccccceeeeeecCCCCCcEEEe
Q 017194 310 SGGNDKLVKVWDCSRFQGVQTSIN--------NDLL------------------IKNINLNKKVNWLCTTPTESENLVVC 363 (375)
Q Consensus 310 s~~~dg~i~iwd~~~~~~~~~~~~--------~~~~------------------~~~~~~~~~v~~~~~~~~~~~~l~s~ 363 (375)
+++.||.|++||+.+......... ...+ .....|..++.+++|+| +|++|+++
T Consensus 323 s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~la~~ 401 (416)
T 2pm9_A 323 CASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAF-GGKLVQIT 401 (416)
T ss_dssp ECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEET-TTEEECBC
T ss_pred EEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEee-CCeEEEEe
Confidence 999999999999988753211100 0000 01112677888999999 99999999
Q ss_pred eCCCeEEEEecC
Q 017194 364 DTSKVVKVYSIS 375 (375)
Q Consensus 364 ~~dg~v~iw~~~ 375 (375)
+.|+.|+||+++
T Consensus 402 ~~d~~v~~w~~~ 413 (416)
T 2pm9_A 402 PDGKGVSITNPK 413 (416)
T ss_dssp TTSSCBCCBCCC
T ss_pred CCCCeEEEEEec
Confidence 999999999974
No 36
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=8.5e-46 Score=321.59 Aligned_cols=313 Identities=13% Similarity=0.099 Sum_probs=236.8
Q ss_pred CCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCcee--eEeeecCccEEEEEEeC-CCCeEEEEcCCCeEE
Q 017194 7 KPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQ--LVTDVGNGPVTSLCFKS-GNEDIIYVSSGKEVK 83 (375)
Q Consensus 7 ~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~--~~~~~~~~~v~~l~~~~-~~~~l~~~~~d~~i~ 83 (375)
......+|...|+||+|+|.++++||+|+.||+|+|||+.+++.. ..+.+|...|++|+|+| ++++|++++.|++|+
T Consensus 111 ~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 111 ILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp SCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEE
T ss_pred ecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE
Confidence 445677899999999999976789999999999999999877654 34567999999999998 688999999999999
Q ss_pred EEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEE
Q 017194 84 SFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVI 163 (375)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 163 (375)
+||++++. ...+.....+...+.+++|+|++++|++|+.||.|++||++ ++.+..+. +|...|.+++|+|+++.+++
T Consensus 191 iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~-~h~~~v~~v~~~p~~~~~~~ 267 (435)
T 4e54_B 191 LQDFKGNI-LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLR-MHKKKVTHVALNPCCDWFLA 267 (435)
T ss_dssp EEETTSCE-EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSB-CCSSCEEEEEECTTCSSEEE
T ss_pred EeeccCCc-eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEe-cccceEEeeeecCCCceEEE
Confidence 99998543 33333344445678899999999999999999999999986 45667788 89999999999999987899
Q ss_pred EeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCccee
Q 017194 164 SGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNI 243 (375)
Q Consensus 164 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 243 (375)
+++.|+.|++||+++.+....+... ..|...|++++|+| ++++|++++.||.|++||+.++...
T Consensus 268 s~s~d~~v~iwd~~~~~~~~~~~~~----------~~h~~~v~~~~~sp------dg~~l~s~~~D~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 268 TASVDQTVKIWDLRQVRGKASFLYS----------LPHRHPVNAACFSP------DGARLLTTDQKSEIRVYSASQWDCP 331 (435)
T ss_dssp EEETTSBCCEEETTTCCSSSCCSBC----------CBCSSCEEECCBCT------TSSEEEEEESSSCEEEEESSSSSSE
T ss_pred EecCcceeeEEecccccccceEEEe----------eeccccccceeECC------CCCeeEEEcCCCEEEEEECCCCccc
Confidence 9999999999999987655433211 11568899999999 8999999999999999999986554
Q ss_pred ecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEec-CCCeEEEEeC
Q 017194 244 SRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGG-NDKLVKVWDC 322 (375)
Q Consensus 244 ~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~-~dg~i~iwd~ 322 (375)
............. ...+.........+..+.++ +++..++.++ .++.|++||.
T Consensus 332 ~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~~i~iwd~ 385 (435)
T 4e54_B 332 LGLIPHPHRHFQH-----------------------LTPIKAAWHPRYNLIVVGRY---PDPNFKSCTPYELRTIDVFDG 385 (435)
T ss_dssp EEECCCCCCCCSS-----------------------SCCCBCEECSSSSCEEEECC---CCTTSCCSSTTCCCCEEEECS
T ss_pred eEEeccccccccc-----------------------ceeEEEEEcCCCCEEEEEEc---CCCCeEEEEecCCCEEEEEEC
Confidence 4332221100000 00000001112233444555 5665555444 4568999999
Q ss_pred CCceeeeecchhhhhhh-hcccccceeee-eecCCCCCcEEEeeCCCeEEEEecC
Q 017194 323 SRFQGVQTSINNDLLIK-NINLNKKVNWL-CTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 323 ~~~~~~~~~~~~~~~~~-~~~~~~~v~~~-~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
.+++ .+.. ..+|...|.++ +|+| +|++|++|+ |+.|+||+++
T Consensus 386 ~~g~---------~~~~l~~~~~~~v~s~~~fsp-dg~~lasg~-d~~i~iW~~~ 429 (435)
T 4e54_B 386 NSGK---------MMCQLYDPESSGISSLNEFNP-MGDTLASAM-GYHILIWSQQ 429 (435)
T ss_dssp SSCC---------EEEEECCSSCCCCCCEEEECT-TSSCEEEEC-SSEEEECCCC
T ss_pred CCCc---------EEEEEeCCCCCcEEEEEEECC-CCCEEEEEc-CCcEEEEECC
Confidence 9984 3333 34688889888 5888 999999876 7899999974
No 37
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.2e-44 Score=351.07 Aligned_cols=351 Identities=17% Similarity=0.189 Sum_probs=289.2
Q ss_pred CeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEEC
Q 017194 8 PRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDV 87 (375)
Q Consensus 8 ~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~ 87 (375)
...+.+|.+.|++++|+|+ +++|++|+.||+|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 608 ~~~~~~h~~~v~~~~~s~~-~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~ 686 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQD-GQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDS 686 (1249)
T ss_dssp SEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEEecccccEEEEEECCC-CCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEEC
Confidence 4467899999999999999 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccccccCCCcceeEEEEcC--CCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEe
Q 017194 88 HMPASWRPLESYNYNKEEINQIVCNP--KSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISG 165 (375)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 165 (375)
.+++ .+..+.+|...|.+++|+| ++.++++|+.|+.|++||+++++.+..+. +|...|.+++|+|+++ .++++
T Consensus 687 ~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~-~h~~~v~~~~~sp~~~-~l~s~ 761 (1249)
T 3sfz_A 687 ATGK---LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF-GHTNSVNHCRFSPDDE-LLASC 761 (1249)
T ss_dssp TTCC---EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEEC-CCSSCEEEEEECSSTT-EEEEE
T ss_pred CCCc---eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheec-CCCCCEEEEEEecCCC-EEEEE
Confidence 9764 4455667899999999999 55689999999999999999999999999 9999999999999998 79999
Q ss_pred ecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeec
Q 017194 166 GLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISR 245 (375)
Q Consensus 166 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 245 (375)
+.||.|++||+++++....+...................+.+++|+| +++.+++++ ++.+.+||+.++.....
T Consensus 762 s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~------dg~~l~~~~-~~~v~~~d~~~~~~~~~ 834 (1249)
T 3sfz_A 762 SADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSA------DGDKIIVAA-KNKVLLFDIHTSGLLAE 834 (1249)
T ss_dssp ESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCT------TSSEEEEEE-TTEEEEEETTTCCEEEE
T ss_pred ECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECC------CCCEEEEEc-CCcEEEEEecCCCceeE
Confidence 99999999999998877776543111111111111234688899998 799998887 68999999999888777
Q ss_pred ccccCCCCCCceeecccccceeeee---eeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeC
Q 017194 246 SKSTTKPLKGSQSTSKVNIRDAEME---ILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDC 322 (375)
Q Consensus 246 ~~~~~~~~~~~~~~s~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~ 322 (375)
........+.+++++|++..+++.+ ....++.........+.+|...|.+++|+ |++++|++++.||.|++|++
T Consensus 835 ~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~s---pdg~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 835 IHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFS---PDGSSFLTASDDQTIRVWET 911 (1249)
T ss_dssp EECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEEC---TTSSEEEEEETTSCEEEEEH
T ss_pred EcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEEC---CCCCEEEEEeCCCeEEEEEc
Confidence 7767778899999999999988632 22233333445667888999999999999 99999999999999999996
Q ss_pred CCceee----------------------------------------------------------------------eecc
Q 017194 323 SRFQGV----------------------------------------------------------------------QTSI 332 (375)
Q Consensus 323 ~~~~~~----------------------------------------------------------------------~~~~ 332 (375)
...... ....
T Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~ 991 (1249)
T 3sfz_A 912 KKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELP 991 (1249)
T ss_dssp HHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETT
T ss_pred cccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcC
Confidence 531000 0011
Q ss_pred hhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 333 NNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 333 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
.........+|...|.+++|+| ++++|++++.||.|++|++.
T Consensus 992 ~~~~~~~~~~h~~~v~~l~~s~-dg~~l~s~~~dg~i~vwd~~ 1033 (1249)
T 3sfz_A 992 NNRVFSSGVGHKKAVRHIQFTA-DGKTLISSSEDSVIQVWNWQ 1033 (1249)
T ss_dssp TTSCEEECCCCSSCCCCEEECS-SSSCEEEECSSSBEEEEETT
T ss_pred CCceeeecccCCCceEEEEECC-CCCEEEEEcCCCEEEEEECC
Confidence 1233345567999999999999 99999999999999999974
No 38
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.3e-44 Score=301.48 Aligned_cols=246 Identities=11% Similarity=0.109 Sum_probs=209.4
Q ss_pred ecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeE----eeecCccEEEEEEeCCCCeEEEEcCCCeEEEEEC
Q 017194 12 RGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLV----TDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDV 87 (375)
Q Consensus 12 ~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~----~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~ 87 (375)
..|...|++++|+|+ ..|++|+.||+|+|||+++++.+.. +.+|...|++++|+|++++|++++.|++|++||+
T Consensus 79 ~~~~~~v~~~~~s~d--~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 79 VQTEAGVADLTWVGE--RGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp EEESSCEEEEEEETT--TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eccCCCEEEEEEeCC--CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 346788999999998 4788999999999999999876544 3479999999999999999999999999999999
Q ss_pred CCCCcccccccccCCCcceeEEEEcCCCC-eEEEEeCCCcEEEEeCcCceeeeeEec-CcccceeEEEEeeCCCcEEEEe
Q 017194 88 HMPASWRPLESYNYNKEEINQIVCNPKSS-FLACADDGGDVKIIDIRQHCLYKSLRA-GHSSICSSVQFIPWKPWEVISG 165 (375)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~ 165 (375)
+++ +.+..+.+|...|.+++|+|++. +|++++.|+.|++||+++++....+.. .|...+.+++|+|++..+|++|
T Consensus 157 ~~~---~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg 233 (344)
T 4gqb_B 157 AQQ---VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFG 233 (344)
T ss_dssp TTT---EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEE
T ss_pred CCC---cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEe
Confidence 975 44566778899999999999874 688999999999999999988776641 4556789999999776689999
Q ss_pred ecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCC-CEEEEEecCCcEEEEeCCCcceee
Q 017194 166 GLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTN-KICVVAKGDGVVDVINIESELNIS 244 (375)
Q Consensus 166 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~ 244 (375)
+.||.|++||+++++++..+.. |...|++++|+| ++ ++|++|+.|+.|++||+.+++
T Consensus 234 ~~dg~v~~wd~~~~~~~~~~~~-------------h~~~v~~v~fsp------~g~~~lasgs~D~~i~vwd~~~~~--- 291 (344)
T 4gqb_B 234 DENGTVSLVDTKSTSCVLSSAV-------------HSQCVTGLVFSP------HSVPFLASLSEDCSLAVLDSSLSE--- 291 (344)
T ss_dssp ETTSEEEEEESCC--CCEEEEC-------------CSSCEEEEEECS------SSSCCEEEEETTSCEEEECTTCCE---
T ss_pred ccCCcEEEEECCCCcEEEEEcC-------------CCCCEEEEEEcc------CCCeEEEEEeCCCeEEEEECCCCc---
Confidence 9999999999999999988874 478899999999 56 689999999999999998641
Q ss_pred cccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCc-EEEEecCCCeEEEEeCC
Q 017194 245 RSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGK-YLISGGNDKLVKVWDCS 323 (375)
Q Consensus 245 ~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~-~l~s~~~dg~i~iwd~~ 323 (375)
+..+.+|...|++++|+ |+++ +|++++.|++|++|++.
T Consensus 292 --------------------------------------~~~~~~H~~~V~~v~~s---p~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 292 --------------------------------------LFRSQAHRDFVRDATWS---PLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp --------------------------------------EEEECCCSSCEEEEEEC---SSSTTEEEEEETTSCEEEEECC
T ss_pred --------------------------------------EEEEcCCCCCEEEEEEe---CCCCeEEEEEcCCCeEEEEECC
Confidence 23567999999999999 8876 67799999999999998
Q ss_pred Cc
Q 017194 324 RF 325 (375)
Q Consensus 324 ~~ 325 (375)
+.
T Consensus 331 ~~ 332 (344)
T 4gqb_B 331 TE 332 (344)
T ss_dssp C-
T ss_pred CC
Confidence 85
No 39
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.7e-45 Score=308.88 Aligned_cols=299 Identities=9% Similarity=0.034 Sum_probs=228.1
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCC-------cEEEEecccCce----------eeEeeecCccEEEEEE
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDG-------CICWFDLRSKDV----------QLVTDVGNGPVTSLCF 66 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~-------~i~iw~~~~~~~----------~~~~~~~~~~v~~l~~ 66 (375)
.|+....-..-.-||+|++|+|+ +++|++||.+. .|++|++..+.. ...+..|...|.++++
T Consensus 3 ~m~~~~~~~~~g~PV~sv~fs~d-g~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~ 81 (365)
T 4h5i_A 3 SMKFVTASYNVGYPAYGAKFLNN-DTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDA 81 (365)
T ss_dssp -CCCCEEEEECSSCEEEEEEEET-TEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEE
T ss_pred cccceeeecCCCCCEEEEEEeCC-CcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEe
Confidence 34433333333468999999999 89999987543 599999875542 1235567788888876
Q ss_pred eCCCCeEEEEc-----------CCCeEEEEECCCCCcc-ccc-----ccccCCCcceeEEEEcCCCCeEEEEe--CCCcE
Q 017194 67 KSGNEDIIYVS-----------SGKEVKSFDVHMPASW-RPL-----ESYNYNKEEINQIVCNPKSSFLACAD--DGGDV 127 (375)
Q Consensus 67 ~~~~~~l~~~~-----------~d~~i~iwd~~~~~~~-~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i 127 (375)
+ ++.+++++ .|+.+++|++.+.... ... .....+...+..++|+|||+++++++ .|++|
T Consensus 82 ~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i 159 (365)
T 4h5i_A 82 S--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIM 159 (365)
T ss_dssp E--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEE
T ss_pred C--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEE
Confidence 5 45566553 4678999998754321 111 11223345688999999999987554 78999
Q ss_pred EEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeE
Q 017194 128 KIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHA 207 (375)
Q Consensus 128 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 207 (375)
++||+++++.+..+. |...|.+++|+|+|+ ++++++.+ .+++|+..+++.+...... .+...+.+
T Consensus 160 ~iwd~~~~~~~~~~~--~~~~V~~v~fspdg~-~l~s~s~~-~~~~~~~~~~~~~~~~~~~-----------~~~~~v~~ 224 (365)
T 4h5i_A 160 RIIDPSDLTEKFEIE--TRGEVKDLHFSTDGK-VVAYITGS-SLEVISTVTGSCIARKTDF-----------DKNWSLSK 224 (365)
T ss_dssp EEEETTTTEEEEEEE--CSSCCCEEEECTTSS-EEEEECSS-CEEEEETTTCCEEEEECCC-----------CTTEEEEE
T ss_pred EEeECCCCcEEEEeC--CCCceEEEEEccCCc-eEEeccce-eEEEEEeccCcceeeeecC-----------CCCCCEEE
Confidence 999999999988887 778899999999998 78888755 5667777777665443321 14678999
Q ss_pred EeecCCccccCCCCEEEEEecCC----cEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEee
Q 017194 208 IAIPDADMLDKTNKICVVAKGDG----VVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLD 283 (375)
Q Consensus 208 ~~~~~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~ 283 (375)
++|+| +++++++++.|+ .+++|++.... ......
T Consensus 225 v~fsp------dg~~l~~~s~d~~~~~~i~~~~~~~~~------------------------------------~~~~~~ 262 (365)
T 4h5i_A 225 INFIA------DDTVLIAASLKKGKGIVLTKISIKSGN------------------------------------TSVLRS 262 (365)
T ss_dssp EEEEE------TTEEEEEEEESSSCCEEEEEEEEETTE------------------------------------EEEEEE
T ss_pred EEEcC------CCCEEEEEecCCcceeEEeecccccce------------------------------------ecceee
Confidence 99999 899999999887 57888877531 112334
Q ss_pred eeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhh-hcccccceeeeeecCCCCCcEEE
Q 017194 284 YSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIK-NINLNKKVNWLCTTPTESENLVV 362 (375)
Q Consensus 284 ~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s 362 (375)
..+.+|...|++++|+ |+|++||+|+.|++|+|||+.++ +++.. +.+|...|++++|+| ||++|||
T Consensus 263 ~~~~~~~~~V~~~~~S---pdg~~lasgs~D~~V~iwd~~~~---------~~~~~~~~gH~~~V~~v~fSp-dg~~laS 329 (365)
T 4h5i_A 263 KQVTNRFKGITSMDVD---MKGELAVLASNDNSIALVKLKDL---------SMSKIFKQAHSFAITEVTISP-DSTYVAS 329 (365)
T ss_dssp EEEESSCSCEEEEEEC---TTSCEEEEEETTSCEEEEETTTT---------EEEEEETTSSSSCEEEEEECT-TSCEEEE
T ss_pred eeecCCCCCeEeEEEC---CCCCceEEEcCCCEEEEEECCCC---------cEEEEecCcccCCEEEEEECC-CCCEEEE
Confidence 5677899999999999 99999999999999999999998 44444 578999999999999 9999999
Q ss_pred eeCCCeEEEEecC
Q 017194 363 CDTSKVVKVYSIS 375 (375)
Q Consensus 363 ~~~dg~v~iw~~~ 375 (375)
++.|++|+||+++
T Consensus 330 ~S~D~tvrvw~ip 342 (365)
T 4h5i_A 330 VSAANTIHIIKLP 342 (365)
T ss_dssp EETTSEEEEEECC
T ss_pred EeCCCeEEEEEcC
Confidence 9999999999984
No 40
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.4e-45 Score=317.94 Aligned_cols=339 Identities=15% Similarity=0.132 Sum_probs=264.7
Q ss_pred ceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCccccc
Q 017194 17 TATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPL 96 (375)
Q Consensus 17 ~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 96 (375)
.+++++|+|+ +++|++++.|+.|++||+.+++....+..| ..+....|+|++++|++++.|+.|++||+.+++ ..
T Consensus 58 ~~~~~~~s~~-g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~ 132 (420)
T 3vl1_A 58 AGKGNTFEKV-GSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL---QR 132 (420)
T ss_dssp CCTTCEEEEE-ETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCE---EE
T ss_pred cccceeeeec-CCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcc---ee
Confidence 3557899999 899999999999999999988877777665 445556789999999999999999999998653 34
Q ss_pred ccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeC
Q 017194 97 ESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDF 176 (375)
Q Consensus 97 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~ 176 (375)
..+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+. +|...|.+++|+|+++ +|++++.|+.|++||+
T Consensus 133 ~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~ 210 (420)
T 3vl1_A 133 EIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI-GHRATVTDIAIIDRGR-NVLSASLDGTIRLWEC 210 (420)
T ss_dssp EETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE-CCSSCEEEEEEETTTT-EEEEEETTSCEEEEET
T ss_pred eecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc-CCCCcEEEEEEcCCCC-EEEEEcCCCcEEEeEC
Confidence 4556789999999999999999999999999999999999999999 9999999999999998 7999999999999999
Q ss_pred CCCCcceEEecCCCCCCC-----------CCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeec
Q 017194 177 SKGRPNKIVNFGLPENNG-----------NAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISR 245 (375)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 245 (375)
++++.+..+......... ......+...+.+++|+| ++++|++++.||.|++||++++.....
T Consensus 211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~------~~~~l~~~~~dg~i~i~d~~~~~~~~~ 284 (420)
T 3vl1_A 211 GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT------YGKYVIAGHVSGVITVHNVFSKEQTIQ 284 (420)
T ss_dssp TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC------TTEEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC------CCCEEEEEcCCCeEEEEECCCCceeEE
Confidence 999888877643110000 000011234455555666 899999999999999999999887777
Q ss_pred ccccCCCCCCceeeccccc-ceeeee------eeecCCcceeEeeeeecC-CCccEEEEEEeecCCCCcEEEEecCCCeE
Q 017194 246 SKSTTKPLKGSQSTSKVNI-RDAEME------ILDQSGGKRLHLDYSVGG-HTAAASCVAFSMFGERGKYLISGGNDKLV 317 (375)
Q Consensus 246 ~~~~~~~~~~~~~~s~~g~-~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~~~l~s~~~dg~i 317 (375)
........+.+++++|++. ++++.+ .++..... ..+..+.. |...|.++.+ +++++|++++.|+.|
T Consensus 285 ~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~--~~~~~~~~~~~~~v~~~~~----~~~~~l~s~~~d~~v 358 (420)
T 3vl1_A 285 LPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPE--CPVGEFLINEGTPINNVYF----AAGALFVSSGFDTSI 358 (420)
T ss_dssp ECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT--SCSEEEEESTTSCEEEEEE----ETTEEEEEETTTEEE
T ss_pred cccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc--CchhhhhccCCCCceEEEe----CCCCEEEEecCCccE
Confidence 7666667888999999999 665522 23333222 12334444 6778888865 578899999999999
Q ss_pred EEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCC---cEEEeeCCCeEEEEecC
Q 017194 318 KVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESE---NLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 318 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~l~s~~~dg~v~iw~~~ 375 (375)
++|++....................|.+.|.+++|+| +++ .|++++.+|.+.+|+++
T Consensus 359 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~~g~l~a~g~~g~~~~~~~~ 418 (420)
T 3vl1_A 359 KLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVS-DDESNGEVLEVGKNNFCALYNLS 418 (420)
T ss_dssp EEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEEC-CSSSSCEEEEEETTTEEEEEESC
T ss_pred EEEeccCCCCCccceeccCccEEccCCcceEEEEEcc-CCCCcceEEEEcCCceEEEEecc
Confidence 9999987432211111122224567889999999999 888 78888889999999985
No 41
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-45 Score=320.56 Aligned_cols=302 Identities=11% Similarity=0.084 Sum_probs=230.5
Q ss_pred eeecCCCceeEEEEecCC-C-------CEEEE-------------------eCCCCcEEEEecccCcee----eEeeecC
Q 017194 10 RLRGHKATATCCIASRDR-P-------GFVAS-------------------SGEDGCICWFDLRSKDVQ----LVTDVGN 58 (375)
Q Consensus 10 ~l~~h~~~i~~~~~~~~~-~-------~~l~s-------------------~~~d~~i~iw~~~~~~~~----~~~~~~~ 58 (375)
.+. +.+.|.+|+|+|++ + ++||+ ++.|++|+||++.+++.. ..+..|.
T Consensus 129 ~~~-~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~ 207 (524)
T 2j04_B 129 IYN-VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSF 207 (524)
T ss_dssp EEE-CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECC
T ss_pred EEE-CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecC
Confidence 444 67899999999983 1 56655 557889999999887652 3466788
Q ss_pred ccEEEEEEeCC------CCeEEEEcCCCeEEEEECCCCCcc--------cccccccCCCcceeEEEEcCCCCeEEEEeCC
Q 017194 59 GPVTSLCFKSG------NEDIIYVSSGKEVKSFDVHMPASW--------RPLESYNYNKEEINQIVCNPKSSFLACADDG 124 (375)
Q Consensus 59 ~~v~~l~~~~~------~~~l~~~~~d~~i~iwd~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 124 (375)
+.|.+++|+|+ +.+|++++.|++|++||+.++... .+...+.+|...|.+++|++++ .|++|+.|
T Consensus 208 ~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~D 286 (524)
T 2j04_B 208 GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKN 286 (524)
T ss_dssp CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETT
T ss_pred CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCC
Confidence 99999999996 579999999999999999865422 1233567788999999999864 89999999
Q ss_pred CcEEEEeCcCce-eeeeEecCcccceeEE--EEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccC
Q 017194 125 GDVKIIDIRQHC-LYKSLRAGHSSICSSV--QFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYN 201 (375)
Q Consensus 125 g~i~iwd~~~~~-~~~~~~~~~~~~v~~~--~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (375)
|+|++||+++++ ....+. +|...|+++ .|+|++..+|++++.|++|++||++++++...+.... .
T Consensus 287 gtV~lWD~~~~~~~~~~~~-~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~-----------~ 354 (524)
T 2j04_B 287 GFVAEFDLTDPEVPSFYDQ-VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRF-----------R 354 (524)
T ss_dssp SEEEEEETTBCSSCSEEEE-CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEEC-----------S
T ss_pred CEEEEEECCCCCCceEEee-cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccc-----------c
Confidence 999999998764 455678 899999999 5677762389999999999999999888776665220 1
Q ss_pred CCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeE
Q 017194 202 PAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLH 281 (375)
Q Consensus 202 ~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~ 281 (375)
...+.+++|+| +++.+++++.|+.|++||++++.
T Consensus 355 ~~~v~~v~fsp------~~~~l~s~~~d~tv~lwd~~~~~---------------------------------------- 388 (524)
T 2j04_B 355 GSNLVPVVYCP------QIYSYIYSDGASSLRAVPSRAAF---------------------------------------- 388 (524)
T ss_dssp CCSCCCEEEET------TTTEEEEECSSSEEEEEETTCTT----------------------------------------
T ss_pred cCcccceEeCC------CcCeEEEeCCCCcEEEEECcccc----------------------------------------
Confidence 13478899999 79999999999999999998742
Q ss_pred eeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCce--------------ee-e---ec------------
Q 017194 282 LDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQ--------------GV-Q---TS------------ 331 (375)
Q Consensus 282 ~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~--------------~~-~---~~------------ 331 (375)
+...+.+|...|++++|+ |+|++|++|+.||+|++||+.... .+ . ..
T Consensus 389 ~~~~l~gH~~~V~sva~S---p~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~ 465 (524)
T 2j04_B 389 AVHPLVSRETTITAIGVS---RLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYE 465 (524)
T ss_dssp CCEEEEECSSCEEEEECC---SSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCC
T ss_pred cceeeecCCCceEEEEeC---CCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCce
Confidence 223566899999999999 999999999999999999964320 00 0 00
Q ss_pred -----chhhhhhhhcccccceeeeeecCCCC---CcEEEeeCCCeEEEEecC
Q 017194 332 -----INNDLLIKNINLNKKVNWLCTTPTES---ENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 332 -----~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~s~~~dg~v~iw~~~ 375 (375)
..+..+..+.+|...|.+++|+| ++ ..|++|+.||.|+||++.
T Consensus 466 ~~~~~~~g~~~~~l~gh~~~V~~Vafsp-~~~~~~~lAsg~~~g~vrlw~l~ 516 (524)
T 2j04_B 466 VYPLTVNDVSKAKIDAHGINITCTKWNE-TSAGGKCYAFSNSAGLLTLEYLS 516 (524)
T ss_dssp CCC-------------CCCSCCCEEECC-STTTTTEEEEECTTSEEEEEECS
T ss_pred ecccccCCcceeeecCCCceEEEEECCC-CCCccHHHHhhccCceEEEEEcc
Confidence 01344566778999999999999 64 589999999999999974
No 42
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-44 Score=335.50 Aligned_cols=348 Identities=11% Similarity=0.045 Sum_probs=250.4
Q ss_pred eecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCC
Q 017194 11 LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMP 90 (375)
Q Consensus 11 l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~ 90 (375)
..+|.+.|++++|+|+ +++||+|+.||+|+||+..+.+....+. |..+|.+++|+| +++|++++.|++|++||++++
T Consensus 13 ~~gh~~~V~~lafspd-g~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~ 89 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFT-QNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQ 89 (902)
T ss_dssp EEECSSCEEEEEEETT-TTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTC
T ss_pred ccCCCCCcEEEEECCC-CCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCC
Confidence 4589999999999999 8999999999999999998777655544 788999999999 889999999999999999987
Q ss_pred CcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceee-----------eeEecCcccceeEEEEeeCCC
Q 017194 91 ASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLY-----------KSLRAGHSSICSSVQFIPWKP 159 (375)
Q Consensus 91 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~ 159 (375)
+....+. |...|++++|+|++++|++|+.||.|++||+++++.. ..+. +|...|.+++|+|++.
T Consensus 90 ~~~~~~~----~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~-~h~~~V~sl~~sp~~~ 164 (902)
T 2oaj_A 90 KVLTTVF----VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPA-ARLSPIVSIQWNPRDI 164 (902)
T ss_dssp SEEEEEE----CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSS-SCCCCCCEEEEETTEE
T ss_pred cEEEEEc----CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccc-cCCCCeEEEEEccCCC
Confidence 6544442 4678999999999999999999999999999987653 2335 7889999999999754
Q ss_pred cEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCC-----CCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEE
Q 017194 160 WEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGN-----AGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDV 234 (375)
Q Consensus 160 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 234 (375)
..+++|+.|+.| +||+++++.+..+....+..... .....|...|.+++|+| ++++|++++.||.|++
T Consensus 165 ~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp------dg~~lasgs~Dg~i~l 237 (902)
T 2oaj_A 165 GTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP------NSLHIITIHEDNSLVF 237 (902)
T ss_dssp EEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT------TSSEEEEEETTCCEEE
T ss_pred CEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC------CCCEEEEEECCCeEEE
Confidence 479999999999 99999998887776331110000 00112346799999999 8999999999999999
Q ss_pred EeCCCcceeec--cc----c-----------cCCCCCCceeec----ccccceeeeeeeec---------CC--------
Q 017194 235 INIESELNISR--SK----S-----------TTKPLKGSQSTS----KVNIRDAEMEILDQ---------SG-------- 276 (375)
Q Consensus 235 ~d~~~~~~~~~--~~----~-----------~~~~~~~~~~~s----~~g~~~~~~~~~~~---------~~-------- 276 (375)
||+++++.... .. . .....+..++|+ |++..+++.+..+. ..
T Consensus 238 Wd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~ 317 (902)
T 2oaj_A 238 WDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYS 317 (902)
T ss_dssp EETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGG
T ss_pred EECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCcc
Confidence 99998765432 10 0 012235566664 44333322221100 00
Q ss_pred ----------------------------------------------c---------ceeEee---------------eee
Q 017194 277 ----------------------------------------------G---------KRLHLD---------------YSV 286 (375)
Q Consensus 277 ----------------------------------------------~---------~~~~~~---------------~~~ 286 (375)
. ..+... ..+
T Consensus 318 ~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l 397 (902)
T 2oaj_A 318 ITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNL 397 (902)
T ss_dssp GCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGG
T ss_pred ccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcc
Confidence 0 000000 011
Q ss_pred cCCCccEEEEEEee-------------------------------cCCCCcEEEEecCCCeEEEEeCCCceeeeec-chh
Q 017194 287 GGHTAAASCVAFSM-------------------------------FGERGKYLISGGNDKLVKVWDCSRFQGVQTS-INN 334 (375)
Q Consensus 287 ~~~~~~v~~~~~s~-------------------------------~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~ 334 (375)
..|...|+++++++ +.|++++|++|+.|++|++||+.++...... ...
T Consensus 398 ~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~ 477 (902)
T 2oaj_A 398 SWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEV 477 (902)
T ss_dssp TTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEE
T ss_pred cccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEe
Confidence 22334455555421 1278999999999999999999887310000 000
Q ss_pred hh-hhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEec
Q 017194 335 DL-LIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 335 ~~-~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
.. .....+|...|.+++|+| ++++||+|+.||+|+||++
T Consensus 478 ~l~~~~~~~h~~~V~svafsp-dg~~LAsgs~DgtV~lwd~ 517 (902)
T 2oaj_A 478 NLSRTLNKAKELAVDKISFAA-ETLELAVSIETGDVVLFKY 517 (902)
T ss_dssp EHHHHTTCSSSCCEEEEEEET-TTTEEEEEETTSCEEEEEE
T ss_pred echhhcCCCCCCceeEEEecC-CCCeEEEEecCcEEEEEEe
Confidence 00 000127889999999999 9999999999999999997
No 43
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.3e-43 Score=321.87 Aligned_cols=354 Identities=12% Similarity=0.103 Sum_probs=272.9
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCC-EEEEeCCCCcEEEEecccCceeeEeeecCc---cEEEEEEeCC-CCeEEEEcC
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPG-FVASSGEDGCICWFDLRSKDVQLVTDVGNG---PVTSLCFKSG-NEDIIYVSS 78 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~---~v~~l~~~~~-~~~l~~~~~ 78 (375)
+++.+..+.+|.+.|++++|+|+ ++ ++++++.|+.|++||+.+++.+..+..|.. .|.+++|+|+ +++|++++.
T Consensus 149 ~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 227 (615)
T 1pgu_A 149 SGNSLGEVSGHSQRINACHLKQS-RPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS 227 (615)
T ss_dssp TCCEEEECCSCSSCEEEEEECSS-SSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET
T ss_pred CCCcceeeecCCccEEEEEECCC-CCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeC
Confidence 34566788899999999999999 55 899999999999999999999999999999 9999999999 999999999
Q ss_pred CCeEEEEECCCCCccccc-ccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCc----ccceeEEE
Q 017194 79 GKEVKSFDVHMPASWRPL-ESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGH----SSICSSVQ 153 (375)
Q Consensus 79 d~~i~iwd~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----~~~v~~~~ 153 (375)
|+.|++||+.+++....+ .....|...|.+++|+ ++++|++++.|+.|++||+++++.+..+. .+ ...+.++.
T Consensus 228 dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~ 305 (615)
T 1pgu_A 228 DRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWT-LDKQQLGNQQVGVV 305 (615)
T ss_dssp TCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEE-CCTTCGGGCEEEEE
T ss_pred CCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEc-CCCCcccCceeEEE
Confidence 999999999876544433 2111678999999999 99999999999999999999999988888 55 46788888
Q ss_pred EeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCC------------CCC--------cccCCCceeEEeecCC
Q 017194 154 FIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNG------------NAG--------QCYNPAFVHAIAIPDA 213 (375)
Q Consensus 154 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~------------~~~--------~~~~~~~v~~~~~~~~ 213 (375)
|. ++. .+++++.|+.|++||+++++.+..+..+...... ..- ...|...|.++++.+.
T Consensus 306 ~~-~~~-~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~ 383 (615)
T 1pgu_A 306 AT-GNG-RIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKA 383 (615)
T ss_dssp EE-ETT-EEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCST
T ss_pred eC-CCC-eEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCC
Confidence 86 666 7999999999999999987666555422100000 000 0113344445554221
Q ss_pred cc------------cc----------------CC--------------------------------------CCEEEEEe
Q 017194 214 DM------------LD----------------KT--------------------------------------NKICVVAK 227 (375)
Q Consensus 214 ~~------------~~----------------~~--------------------------------------~~~l~~~~ 227 (375)
.. ++ ++ ++++++++
T Consensus 384 ~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 463 (615)
T 1pgu_A 384 QEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGL 463 (615)
T ss_dssp TCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEE
T ss_pred cEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEee
Confidence 00 00 00 55677777
Q ss_pred c-CCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeee---eeecCCcceeEeeeeecC-CCccEEEEEEeecC
Q 017194 228 G-DGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEME---ILDQSGGKRLHLDYSVGG-HTAAASCVAFSMFG 302 (375)
Q Consensus 228 ~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~ 302 (375)
. ||.|++||+.+..............+.+++++|+|+++++.+ ....++....+.+..+.+ |...|.+++|+
T Consensus 464 ~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~s--- 540 (615)
T 1pgu_A 464 EEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWK--- 540 (615)
T ss_dssp TTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEEC---
T ss_pred cCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEc---
Confidence 7 788888888765443222333456778899999999998742 233333334455667777 99999999999
Q ss_pred C----------CCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEE
Q 017194 303 E----------RGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVY 372 (375)
Q Consensus 303 ~----------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw 372 (375)
| ++++|++++.||.|++||+.++. +.+..+.+|...|.+++|+| +++ |++++.||.|++|
T Consensus 541 p~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--------~~~~~~~~h~~~v~~l~~s~-~~~-l~s~~~d~~v~iw 610 (615)
T 1pgu_A 541 PAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM--------KIIKALNAHKDGVNNLLWET-PST-LVSSGADACIKRW 610 (615)
T ss_dssp CCC------CCSCCEEEEEETTSCEEEEESSCTT--------CCEEETTSSTTCEEEEEEEE-TTE-EEEEETTSCEEEE
T ss_pred CccccccccccCCCEEEEEcCCCcEEEEECCCCc--------eechhhhcCccceEEEEEcC-CCC-eEEecCCceEEEE
Confidence 8 99999999999999999999863 34456788999999999999 888 9999999999999
Q ss_pred ecC
Q 017194 373 SIS 375 (375)
Q Consensus 373 ~~~ 375 (375)
+++
T Consensus 611 ~~~ 613 (615)
T 1pgu_A 611 NVV 613 (615)
T ss_dssp EEC
T ss_pred eee
Confidence 985
No 44
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-45 Score=316.33 Aligned_cols=295 Identities=13% Similarity=0.164 Sum_probs=246.7
Q ss_pred CCCceeEEEEecCCCCEEEEe----------CCCCcEEEEecccCc---eeeEeeecCccEEEEEEeCCCCeEEEEcCCC
Q 017194 14 HKATATCCIASRDRPGFVASS----------GEDGCICWFDLRSKD---VQLVTDVGNGPVTSLCFKSGNEDIIYVSSGK 80 (375)
Q Consensus 14 h~~~i~~~~~~~~~~~~l~s~----------~~d~~i~iw~~~~~~---~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~ 80 (375)
+...|.+++|+|++..+|++| +.|+.|++||+.+++ .+..+ .|...|.+++|+|++++|++++.|+
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg 89 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNG 89 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSS
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCC
Confidence 346799999999933499999 899999999999876 33334 4889999999999999999999999
Q ss_pred eEEEEECCCCCc-ccccccccCCCcceeEEEEcCC-CCeEEEEeCCCcEEEEeCcCce------eeee---EecCcccce
Q 017194 81 EVKSFDVHMPAS-WRPLESYNYNKEEINQIVCNPK-SSFLACADDGGDVKIIDIRQHC------LYKS---LRAGHSSIC 149 (375)
Q Consensus 81 ~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~------~~~~---~~~~~~~~v 149 (375)
.|++||+.+... ...+..+.+|...|.+++|+|+ +++|++++.|+.|++||+++++ .... +. .|...|
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~v 168 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSM-SSVDEV 168 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSC-CSSCCC
T ss_pred eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccccccc-CCCCCe
Confidence 999999986322 2356667788999999999998 8999999999999999999876 3222 34 788999
Q ss_pred eEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCC-CEEEEEec
Q 017194 150 SSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTN-KICVVAKG 228 (375)
Q Consensus 150 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~l~~~~~ 228 (375)
.+++|+|++..+|++++.|+.|++||+++++.+..+....+ ...+...+.+++|+| ++ .++++++.
T Consensus 169 ~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-------~~~~~~~v~~~~~~~------~~~~~l~~~~~ 235 (416)
T 2pm9_A 169 ISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSP-------NSGIKQQLSVVEWHP------KNSTRVATATG 235 (416)
T ss_dssp CEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCC-------SSCCCCCEEEEEECS------SCTTEEEEEEC
T ss_pred eEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecccc-------ccccCCceEEEEECC------CCCCEEEEEEC
Confidence 99999999544899999999999999999988877764310 001257899999999 55 68999999
Q ss_pred CC---cEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeec-CCCccEEEEEEeecCC-
Q 017194 229 DG---VVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVG-GHTAAASCVAFSMFGE- 303 (375)
Q Consensus 229 dg---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~- 303 (375)
|+ .|++||+++.. .....+. +|...|.+++|+ |
T Consensus 236 d~~~~~i~~~d~~~~~---------------------------------------~~~~~~~~~~~~~v~~~~~s---~~ 273 (416)
T 2pm9_A 236 SDNDPSILIWDLRNAN---------------------------------------TPLQTLNQGHQKGILSLDWC---HQ 273 (416)
T ss_dssp CSSSCCCCEEETTSTT---------------------------------------SCSBCCCSCCSSCEEEEEEC---SS
T ss_pred CCCCceEEEEeCCCCC---------------------------------------CCcEEeecCccCceeEEEeC---CC
Confidence 98 99999999742 1223555 789999999999 7
Q ss_pred CCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCC-CcEEEeeCCCeEEEEecC
Q 017194 304 RGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTES-ENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 304 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~s~~~dg~v~iw~~~ 375 (375)
++++|++++.||.|++||+.++ +.+..+.+|...|.+++|+| ++ ++|++++.||.|++|+++
T Consensus 274 ~~~~l~s~~~dg~v~~wd~~~~---------~~~~~~~~~~~~v~~~~~s~-~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 274 DEHLLLSSGRDNTVLLWNPESA---------EQLSQFPARGNWCFKTKFAP-EAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp CSSCEEEEESSSEEEEECSSSC---------CEEEEEECSSSCCCCEEECT-TCTTEEEECCSSSEEEEEESC
T ss_pred CCCeEEEEeCCCCEEEeeCCCC---------ccceeecCCCCceEEEEECC-CCCCEEEEEecCCcEEEEEcc
Confidence 9999999999999999999998 55667778999999999999 76 899999999999999974
No 45
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.4e-43 Score=297.59 Aligned_cols=251 Identities=15% Similarity=0.275 Sum_probs=222.4
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCc----eeeEeeecCccEEEEEEeCCCCeEEEEcCC
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKD----VQLVTDVGNGPVTSLCFKSGNEDIIYVSSG 79 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~----~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d 79 (375)
+++.+..+..|...|.+++|+|+ +++|++|+.|+.|++|++.+++ ....+.+|...|.++.|++++. +++++.|
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d 163 (340)
T 1got_B 86 TTNKVHAIPLRSSWVMTCAYAPS-GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGD 163 (340)
T ss_dssp TCCEEEEEECSSSCEEEEEECTT-SSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETT
T ss_pred CCCcceEeecCCccEEEEEECCC-CCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECC
Confidence 45567788899999999999999 8999999999999999998753 4566788999999999998875 8899999
Q ss_pred CeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCC
Q 017194 80 KEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKP 159 (375)
Q Consensus 80 ~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 159 (375)
+.|++||+++++ .+..+.+|...|.+++|+|+++++++|+.|+.|++||+++++.+..+. +|...|.+++|+|+++
T Consensus 164 ~~i~~wd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~p~~~ 239 (340)
T 1got_B 164 TTCALWDIETGQ---QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT-GHESDINAICFFPNGN 239 (340)
T ss_dssp SCEEEEETTTTE---EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC-CCSSCEEEEEECTTSS
T ss_pred CcEEEEECCCCc---EEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEc-CCcCCEEEEEEcCCCC
Confidence 999999998754 445567789999999999999999999999999999999999999999 9999999999999998
Q ss_pred cEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCC
Q 017194 160 WEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIES 239 (375)
Q Consensus 160 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 239 (375)
+|++++.|++|++||+++++.+..+.... +...|.+++|+| ++++|++|+.||.|++||+.+
T Consensus 240 -~l~s~s~d~~v~iwd~~~~~~~~~~~~~~-----------~~~~v~~~~~s~------~g~~l~~g~~d~~i~vwd~~~ 301 (340)
T 1got_B 240 -AFATGSDDATCRLFDLRADQELMTYSHDN-----------IICGITSVSFSK------SGRLLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp -EEEEEETTSCEEEEETTTTEEEEEECCTT-----------CCSCEEEEEECT------TSSEEEEEETTSEEEEEETTT
T ss_pred -EEEEEcCCCcEEEEECCCCcEEEEEccCC-----------cccceEEEEECC------CCCEEEEECCCCeEEEEEccc
Confidence 79999999999999999888776664220 234799999999 899999999999999999986
Q ss_pred cceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEE
Q 017194 240 ELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKV 319 (375)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~i 319 (375)
. .....+.+|...|.+++|+ |+|++|++|+.|+.|+|
T Consensus 302 ~----------------------------------------~~~~~~~~h~~~v~~~~~s---~dg~~l~s~s~D~~i~i 338 (340)
T 1got_B 302 A----------------------------------------DRAGVLAGHDNRVSCLGVT---DDGMAVATGSWDSFLKI 338 (340)
T ss_dssp C----------------------------------------CEEEEEECCSSCEEEEEEC---TTSSCEEEEETTSCEEE
T ss_pred C----------------------------------------cEeeEeecCCCcEEEEEEc---CCCCEEEEEcCCccEEe
Confidence 4 2344678999999999999 99999999999999999
Q ss_pred Ee
Q 017194 320 WD 321 (375)
Q Consensus 320 wd 321 (375)
||
T Consensus 339 Wd 340 (340)
T 1got_B 339 WN 340 (340)
T ss_dssp EC
T ss_pred cC
Confidence 97
No 46
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.8e-43 Score=329.60 Aligned_cols=295 Identities=16% Similarity=0.233 Sum_probs=260.8
Q ss_pred CCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEE
Q 017194 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKS 84 (375)
Q Consensus 5 ~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~i 84 (375)
.+..+.+++|.+.|.+++|+|+ +++||+++.||.|+|||+.+++.+..+..|..+|.+++|+|++++|++++.|+.|++
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp~-~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 81 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHPT-EPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRV 81 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred cccceeeecCCCceEEEEECCC-CCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEE
Confidence 4566889999999999999999 899999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCc-eeeeeEecCcccceeEEEEee-CCCcEE
Q 017194 85 FDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQH-CLYKSLRAGHSSICSSVQFIP-WKPWEV 162 (375)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~~l 162 (375)
||+.+++. +..+.+|...|.+++|+|++++|++++.||.|++||++++ .....+. +|...|.+++|+| ++. .+
T Consensus 82 w~~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~-~l 156 (814)
T 3mkq_A 82 FNYNTGEK---VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE-GHEHFVMCVAFNPKDPS-TF 156 (814)
T ss_dssp EETTTCCE---EEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE-CCSSCEEEEEEETTEEE-EE
T ss_pred EECCCCcE---EEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc-CCCCcEEEEEEEcCCCC-EE
Confidence 99987643 4455668899999999999999999999999999999987 6677788 8999999999999 666 89
Q ss_pred EEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcce
Q 017194 163 ISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELN 242 (375)
Q Consensus 163 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 242 (375)
++++.||.|++||+++++....+..+ +...+..++|+| .+++.++++++.||.|++||+.++
T Consensus 157 ~~~~~dg~v~vwd~~~~~~~~~~~~~------------~~~~v~~~~~~~----~~~~~~l~~~~~dg~i~~~d~~~~-- 218 (814)
T 3mkq_A 157 ASGCLDRTVKVWSLGQSTPNFTLTTG------------QERGVNYVDYYP----LPDKPYMITASDDLTIKIWDYQTK-- 218 (814)
T ss_dssp EEEETTSEEEEEETTCSSCSEEEECC------------CTTCCCEEEECC----STTCCEEEEECTTSEEEEEETTTT--
T ss_pred EEEeCCCeEEEEECCCCcceeEEecC------------CCCCEEEEEEEE----CCCCCEEEEEeCCCEEEEEECCCC--
Confidence 99999999999999998888887755 457899999988 346899999999999999999864
Q ss_pred eecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeC
Q 017194 243 ISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDC 322 (375)
Q Consensus 243 ~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~ 322 (375)
..+..+.+|...|.+++|+ |++++|++++.||.|++||+
T Consensus 219 --------------------------------------~~~~~~~~~~~~v~~~~~~---~~~~~l~~~~~dg~v~vwd~ 257 (814)
T 3mkq_A 219 --------------------------------------SCVATLEGHMSNVSFAVFH---PTLPIIISGSEDGTLKIWNS 257 (814)
T ss_dssp --------------------------------------EEEEEEECCSSCEEEEEEC---SSSSEEEEEETTSCEEEEET
T ss_pred --------------------------------------cEEEEEcCCCCCEEEEEEc---CCCCEEEEEeCCCeEEEEEC
Confidence 3445677899999999999 99999999999999999999
Q ss_pred CCceeeeecchhhhhhhhcccccceeeeeecCCCCCc-EEEeeCCCeEEEEec
Q 017194 323 SRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESEN-LVVCDTSKVVKVYSI 374 (375)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-l~s~~~dg~v~iw~~ 374 (375)
.++ ..+..+..|...+.+++|+| ++.. +++++.|+.+.+|++
T Consensus 258 ~~~---------~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 300 (814)
T 3mkq_A 258 STY---------KVEKTLNVGLERSWCIATHP-TGRKNYIASGFDNGFTVLSL 300 (814)
T ss_dssp TTC---------SEEEEECCSSSSEEEEEECT-TCGGGEEEEEETTEEEEEEC
T ss_pred CCC---------cEEEEeecCCCcEEEEEEcc-CCCceEEEEEeCCCEEEEEc
Confidence 998 55566778889999999999 6653 366666777888875
No 47
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=7.1e-43 Score=317.04 Aligned_cols=330 Identities=16% Similarity=0.166 Sum_probs=261.6
Q ss_pred CCCeeeecCCCc-eeEEEEec--CCCCEEEEeCCCCcEEEEecccC--------ceeeEeeecCccEEEEEEeCCCCeEE
Q 017194 6 AKPRRLRGHKAT-ATCCIASR--DRPGFVASSGEDGCICWFDLRSK--------DVQLVTDVGNGPVTSLCFKSGNEDII 74 (375)
Q Consensus 6 ~~~~~l~~h~~~-i~~~~~~~--~~~~~l~s~~~d~~i~iw~~~~~--------~~~~~~~~~~~~v~~l~~~~~~~~l~ 74 (375)
+.+..+.+|.+. |++++|+| + +++|++|+.||.|++||+.++ +....+..|..+|.+++|+|++++|+
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~-~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 132 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKG-SQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLC 132 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTT-CCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred ccceEEecCCCceEEEEEECcCCC-CCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEE
Confidence 677889999999 99999999 8 899999999999999999755 66778888999999999999999999
Q ss_pred EEcCC----CeEEEEECCCCCcccccccccCCCcceeEEEEcCCCC-eEEEEeCCCcEEEEeCcCceeeeeEecCccc--
Q 017194 75 YVSSG----KEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSS-FLACADDGGDVKIIDIRQHCLYKSLRAGHSS-- 147 (375)
Q Consensus 75 ~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-- 147 (375)
+++.+ +.|++||.. ..+..+.+|...|.+++|+|+++ .+++++.|+.|++||+.+++.+..+. +|..
T Consensus 133 ~~~~~~~~~~~v~~~d~~-----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~-~~~~~~ 206 (615)
T 1pgu_A 133 VVGEGRDNFGVFISWDSG-----NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR-THHKQG 206 (615)
T ss_dssp EEECCSSCSEEEEETTTC-----CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEEC-SSSCTT
T ss_pred EeccCCCCccEEEEEECC-----CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeec-ccCCCC
Confidence 99987 688888832 34556677899999999999998 79999999999999999999999999 8998
Q ss_pred -ceeEEEEeeC-CCcEEEEeecCCeEEEeeCCCCCcceEEec---CCCCCCCCCCcccCCCceeEEeecCCccccCCCCE
Q 017194 148 -ICSSVQFIPW-KPWEVISGGLDSKLVMWDFSKGRPNKIVNF---GLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKI 222 (375)
Q Consensus 148 -~v~~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 222 (375)
.|.+++|+|+ ++ ++++++.|+.|++||+++++.+..+.. . |...|.+++|+ . +++
T Consensus 207 ~~v~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~------------~~~~v~~~~~~-~------~~~ 266 (615)
T 1pgu_A 207 SFVRDVEFSPDSGE-FVITVGSDRKISCFDGKSGEFLKYIEDDQEP------------VQGGIFALSWL-D------SQK 266 (615)
T ss_dssp CCEEEEEECSTTCC-EEEEEETTCCEEEEETTTCCEEEECCBTTBC------------CCSCEEEEEES-S------SSE
T ss_pred ceEEEEEECCCCCC-EEEEEeCCCeEEEEECCCCCEeEEecccccc------------cCCceEEEEEc-C------CCE
Confidence 9999999999 87 799999999999999999988877732 3 56789999997 3 778
Q ss_pred EEEEecCCcEEEEeCCCcceeeccccc--------------------------------------------C--------
Q 017194 223 CVVAKGDGVVDVINIESELNISRSKST--------------------------------------------T-------- 250 (375)
Q Consensus 223 l~~~~~dg~i~i~d~~~~~~~~~~~~~--------------------------------------------~-------- 250 (375)
|++++.||.|++||+++++........ .
T Consensus 267 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~ 346 (615)
T 1pgu_A 267 FATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALT 346 (615)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEE
Confidence 888888888888888765433322111 0
Q ss_pred -------------------------CCCCCceeecccccceeeee------eee--------------------------
Q 017194 251 -------------------------KPLKGSQSTSKVNIRDAEME------ILD-------------------------- 273 (375)
Q Consensus 251 -------------------------~~~~~~~~~s~~g~~~~~~~------~~~-------------------------- 273 (375)
...+.++++ +++..+++.+ .++
T Consensus 347 ~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 425 (615)
T 1pgu_A 347 VNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTN 425 (615)
T ss_dssp TTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEET
T ss_pred ecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeC
Confidence 011111222 1122222210 000
Q ss_pred ---------------------------------------------cCCcceeEee-eeecCCCccEEEEEEeecCCCCcE
Q 017194 274 ---------------------------------------------QSGGKRLHLD-YSVGGHTAAASCVAFSMFGERGKY 307 (375)
Q Consensus 274 ---------------------------------------------~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~~~~ 307 (375)
.++....... ..+.+|...|.+++|+ |++++
T Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s---~~g~~ 502 (615)
T 1pgu_A 426 DDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISIS---PSETY 502 (615)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEEC---TTSSE
T ss_pred CCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEEC---CCCCE
Confidence 0000011111 5567789999999999 99999
Q ss_pred EEEecCCCeEEEEeCCCceeeeecchhhhhhhhcc-cccceeeeeecCC---------CCCcEEEeeCCCeEEEEecC
Q 017194 308 LISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNIN-LNKKVNWLCTTPT---------ESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 308 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~---------~~~~l~s~~~dg~v~iw~~~ 375 (375)
|++++.||.|++||+.++ +.+..+.+ |...|++++|+|. ++++|++++.||.|++|+++
T Consensus 503 l~~~~~dg~i~iw~~~~~---------~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 571 (615)
T 1pgu_A 503 IAAGDVMGKILLYDLQSR---------EVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVK 571 (615)
T ss_dssp EEEEETTSCEEEEETTTT---------EEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESS
T ss_pred EEEcCCCCeEEEeeCCCC---------cceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECC
Confidence 999999999999999998 44555666 9999999999984 78999999999999999974
No 48
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.5e-43 Score=293.32 Aligned_cols=256 Identities=17% Similarity=0.249 Sum_probs=221.2
Q ss_pred CCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEE
Q 017194 7 KPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFD 86 (375)
Q Consensus 7 ~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd 86 (375)
.++.+++|...|.+++|+|+ +++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|++|++||
T Consensus 57 ~~~~~~~h~~~v~~~~~s~d-g~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd 135 (319)
T 3frx_A 57 PVRSFKGHSHIVQDCTLTAD-GAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWT 135 (319)
T ss_dssp EEEEEECCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred cceEEeCCcccEEEEEECCC-CCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 46678999999999999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccccccCCCcceeEEEEcCC------CCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCc
Q 017194 87 VHMPASWRPLESYNYNKEEINQIVCNPK------SSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPW 160 (375)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 160 (375)
++. ..+..+.+|...|.++.|.|. +..+++++.|+.|++||+++.+....+. +|...|.+++|+|+++
T Consensus 136 ~~~----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~sp~g~- 209 (319)
T 3frx_A 136 IKG----QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI-GHNSNINTLTASPDGT- 209 (319)
T ss_dssp TTS----CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEEC-CCCSCEEEEEECTTSS-
T ss_pred CCC----CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeec-CCCCcEEEEEEcCCCC-
Confidence 973 345566778999999999985 4489999999999999999999988998 9999999999999998
Q ss_pred EEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCc
Q 017194 161 EVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESE 240 (375)
Q Consensus 161 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 240 (375)
+|++++.|+.|++||+++++.+..+.. ...+.+++|+| ++.++++++.+ .+++|++...
T Consensus 210 ~l~s~~~dg~i~iwd~~~~~~~~~~~~--------------~~~v~~~~~sp------~~~~la~~~~~-~i~v~~~~~~ 268 (319)
T 3frx_A 210 LIASAGKDGEIMLWNLAAKKAMYTLSA--------------QDEVFSLAFSP------NRYWLAAATAT-GIKVFSLDPQ 268 (319)
T ss_dssp EEEEEETTCEEEEEETTTTEEEEEEEC--------------CSCEEEEEECS------SSSEEEEEETT-EEEEEEETTE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecC--------------CCcEEEEEEcC------CCCEEEEEcCC-CcEEEEeCcC
Confidence 799999999999999999988888773 36899999999 79998888765 5999999864
Q ss_pred ceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEE
Q 017194 241 LNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 320 (375)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iw 320 (375)
......... .......|...+.+++|+ |+|++|++|+.||.|++|
T Consensus 269 ~~~~~~~~~--------------------------------~~~~~~~~~~~v~~~~~s---pdg~~l~sg~~Dg~i~vW 313 (319)
T 3frx_A 269 YLVDDLRPE--------------------------------FAGYSKAAEPHAVSLAWS---ADGQTLFAGYTDNVIRVW 313 (319)
T ss_dssp EEEEEECCC--------------------------------CTTCCGGGCCCEEEEEEC---TTSSEEEEEETTSCEEEE
T ss_pred eeeeccCcc--------------------------------ccccccCcCcceeEEEEC---CCCCEEEEeecCceEEEE
Confidence 322111100 000123456789999999 999999999999999999
Q ss_pred eCCCc
Q 017194 321 DCSRF 325 (375)
Q Consensus 321 d~~~~ 325 (375)
|+.+.
T Consensus 314 d~~t~ 318 (319)
T 3frx_A 314 QVMTA 318 (319)
T ss_dssp EEEEC
T ss_pred EEeec
Confidence 98764
No 49
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.4e-43 Score=302.55 Aligned_cols=312 Identities=13% Similarity=0.120 Sum_probs=245.9
Q ss_pred CCCCCeeeecCCCceeEEEEec-CCCCEEEEeCCCCcEEEEecccCceeeEee-------------ecCccEEEEEEeC-
Q 017194 4 AEAKPRRLRGHKATATCCIASR-DRPGFVASSGEDGCICWFDLRSKDVQLVTD-------------VGNGPVTSLCFKS- 68 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~-~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~-------------~~~~~v~~l~~~~- 68 (375)
+.+....+++|.++|++++|+| + +++|++|+.||.|++||+.+++....+. +|...|.+++|+|
T Consensus 32 ~~~~~~~~~~h~~~v~~~~~s~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 110 (408)
T 4a11_B 32 LNKDRDVERIHGGGINTLDIEPVE-GRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPH 110 (408)
T ss_dssp ECTTEEECCCCSSCEEEEEECTTT-CCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTT
T ss_pred cCcceeeeeccCCcEEEEEEecCC-CCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccC
Confidence 3455677889999999999999 7 8999999999999999999887655543 4899999999999
Q ss_pred CCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCC---CCeEEEEeCCCcEEEEeCcCceeeeeEecCc
Q 017194 69 GNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPK---SSFLACADDGGDVKIIDIRQHCLYKSLRAGH 145 (375)
Q Consensus 69 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 145 (375)
++.+|++++.|+.|++||+.+++....+. +...+.++.++|. +.++++++.++.|++||+++++.+..+. .|
T Consensus 111 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~ 185 (408)
T 4a11_B 111 DTGMFTSSSFDKTLKVWDTNTLQTADVFN----FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ-GH 185 (408)
T ss_dssp CTTCEEEEETTSEEEEEETTTTEEEEEEE----CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC-CC
T ss_pred CCcEEEEEeCCCeEEEeeCCCCccceecc----CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec-CC
Confidence 77899999999999999999765443333 3678999999984 4599999999999999999999999999 99
Q ss_pred ccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCC-cceEEecCCCCCCC--CCCcccCCCceeEEeecCCccccCCCCE
Q 017194 146 SSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR-PNKIVNFGLPENNG--NAGQCYNPAFVHAIAIPDADMLDKTNKI 222 (375)
Q Consensus 146 ~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 222 (375)
...|.+++|+|++++++++++.||.|++||++++. .+..+......... ......+...|.+++|+| ++++
T Consensus 186 ~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~ 259 (408)
T 4a11_B 186 RQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS------DGLH 259 (408)
T ss_dssp CSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT------TSSE
T ss_pred CCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC------CCCE
Confidence 99999999999998679999999999999998876 34443221111000 111223678899999999 7999
Q ss_pred EEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecC
Q 017194 223 CVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFG 302 (375)
Q Consensus 223 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 302 (375)
|++++.||.|++||+.+++........ ........+......
T Consensus 260 l~~~~~dg~i~vwd~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~--- 301 (408)
T 4a11_B 260 LLTVGTDNRMRLWNSSNGENTLVNYGK-----------------------------------VCNNSKKGLKFTVSC--- 301 (408)
T ss_dssp EEEEETTSCEEEEETTTCCBCCCCCCC-----------------------------------CCCCCSSCCCCEECC---
T ss_pred EEEecCCCeEEEEECCCCccceecccc-----------------------------------ccccccccceeEEec---
Confidence 999999999999999986433221111 000001111111112
Q ss_pred CCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 303 ERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 303 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
..+..+++++.|+.|++||+.++ +.+..+.+|...|.+++|+| ++++|++++.||.|++|+++
T Consensus 302 ~~~~~~~~~~~~~~i~v~d~~~~---------~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~ 364 (408)
T 4a11_B 302 GCSSEFVFVPYGSTIAVYTVYSG---------EQITMLKGHYKTVDCCVFQS-NFQELYSGSRDCNILAWVPS 364 (408)
T ss_dssp SSSSCEEEEEETTEEEEEETTTC---------CEEEEECCCSSCEEEEEEET-TTTEEEEEETTSCEEEEEEC
T ss_pred CCCceEEEEecCCEEEEEECcCC---------cceeeeccCCCeEEEEEEcC-CCCEEEEECCCCeEEEEeCC
Confidence 34556777788999999999998 56667788999999999999 99999999999999999974
No 50
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-43 Score=296.57 Aligned_cols=271 Identities=18% Similarity=0.233 Sum_probs=217.2
Q ss_pred ecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCc--eeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCC
Q 017194 12 RGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKD--VQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHM 89 (375)
Q Consensus 12 ~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~ 89 (375)
.+|.+.|++++|+|+ +++|++|+.|++|++|++.++. .+..+.+|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 58 ~~h~~~v~~~~~sp~-g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPC-GNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp SSCSSCEEEEEECTT-SSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECT
T ss_pred cccCCcEEEEEECCC-CCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCC
Confidence 689999999999999 8999999999999999988764 5678889999999999999999999999999999999987
Q ss_pred CCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCce--eeeeEecCcccceeEEEEeeCCCcEEEEeec
Q 017194 90 PASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHC--LYKSLRAGHSSICSSVQFIPWKPWEVISGGL 167 (375)
Q Consensus 90 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 167 (375)
+.....+..+..|...|.+++|+|++++|++++.|+.|++||.++++ ....+. +|...|.+++|+|+++ +|++++.
T Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~-~h~~~v~~l~~sp~g~-~l~s~s~ 214 (345)
T 3fm0_A 137 EDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLE-GHESTVWSLAFDPSGQ-RLASCSD 214 (345)
T ss_dssp TSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECTTSS-EEEEEET
T ss_pred CCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEec-CCCCceEEEEECCCCC-EEEEEeC
Confidence 76666677778899999999999999999999999999999998775 456778 9999999999999998 7999999
Q ss_pred CCeEEEeeCCCCCcceEEecCCCCCCC---CCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceee
Q 017194 168 DSKLVMWDFSKGRPNKIVNFGLPENNG---NAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNIS 244 (375)
Q Consensus 168 d~~i~~wd~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 244 (375)
|++|++||.........+......... ......|...|.+++|+| ++..|++++.|+.|++|+........
T Consensus 215 D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~------~~~~l~s~~~d~~i~vw~~~~~~~~~ 288 (345)
T 3fm0_A 215 DRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQ------LTGALATACGDDAIRVFQEDPNSDPQ 288 (345)
T ss_dssp TSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECT------TTCCEEEEETTSCEEEEEECTTSCTT
T ss_pred CCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEec------CCCEEEEEeCCCeEEEEEeCCCCCcc
Confidence 999999997433211100000000000 000012567899999999 79999999999999999987532110
Q ss_pred cccccCCCCCCceeecccccceeeeeeeecCCccee-EeeeeecCCCccEEEEEEeecCCCC-cEEEEecCCCeEEEEeC
Q 017194 245 RSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRL-HLDYSVGGHTAAASCVAFSMFGERG-KYLISGGNDKLVKVWDC 322 (375)
Q Consensus 245 ~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~-~~l~s~~~dg~i~iwd~ 322 (375)
. ... .......+|...|++++|+ |++ .+||+|+.||.|++|++
T Consensus 289 ~--------------------------------~~~~~~~~~~~~h~~~V~~v~~~---p~~~~~laS~s~Dg~v~~W~~ 333 (345)
T 3fm0_A 289 Q--------------------------------PTFSLTAHLHQAHSQDVNCVAWN---PKEPGLLASCSDDGEVAFWKY 333 (345)
T ss_dssp S--------------------------------CCEEEEEEETTSSSSCEEEEEEC---SSSTTEEEEEETTSCEEEEEE
T ss_pred e--------------------------------eeEEEEeeecccccCcEeEeEEe---CCCceEEEEcCCCCcEEEEEe
Confidence 0 001 1123456899999999999 877 59999999999999999
Q ss_pred CCce
Q 017194 323 SRFQ 326 (375)
Q Consensus 323 ~~~~ 326 (375)
.+.+
T Consensus 334 ~~~~ 337 (345)
T 3fm0_A 334 QRPE 337 (345)
T ss_dssp CC--
T ss_pred cCCC
Confidence 9874
No 51
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=6.8e-43 Score=287.76 Aligned_cols=256 Identities=14% Similarity=0.215 Sum_probs=213.2
Q ss_pred CeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEeccc--CceeeEeeecCccEEEEEEeCC--CCeEEEEcCCCeEE
Q 017194 8 PRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRS--KDVQLVTDVGNGPVTSLCFKSG--NEDIIYVSSGKEVK 83 (375)
Q Consensus 8 ~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~--~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~d~~i~ 83 (375)
+..+.+|.+.|++++|+|+ +++||+|+.|++|+|||+.. .+.+..+.+|..+|.+++|+++ +++|++++.|++|+
T Consensus 2 ~~~~~~h~~~V~~~~~s~~-g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYY-GKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp CEECCSCSSCEEEEEECTT-SSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred ceeccCCcCceEEEEECCC-CCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence 4567899999999999999 89999999999999999974 3667889999999999999863 88999999999999
Q ss_pred EEECCCCCcccccccccCCCcceeEEEEcCC--CCeEEEEeCCCcEEEEeCcCce--eeeeEecCcccceeEEEEeeC--
Q 017194 84 SFDVHMPASWRPLESYNYNKEEINQIVCNPK--SSFLACADDGGDVKIIDIRQHC--LYKSLRAGHSSICSSVQFIPW-- 157 (375)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~-- 157 (375)
+||+++++ ...+..+..|...|.+++|+|+ +.+|++++.|+.|++||++++. ....+. +|...|.+++|+|+
T Consensus 81 iWd~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~ 158 (297)
T 2pm7_B 81 IWKEENGR-WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIID-AHAIGVNSASWAPATI 158 (297)
T ss_dssp EEEBSSSC-BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEE-CCSSCEEEEEECCCC-
T ss_pred EEEcCCCc-eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeee-cccCccceEeecCCcc
Confidence 99998653 2344556678999999999997 8899999999999999998753 245567 89999999999997
Q ss_pred -----------CCcEEEEeecCCeEEEeeCCCCCc----ceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCC---
Q 017194 158 -----------KPWEVISGGLDSKLVMWDFSKGRP----NKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKT--- 219 (375)
Q Consensus 158 -----------~~~~l~~~~~d~~i~~wd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--- 219 (375)
++ +|++|+.|++|++||+++++. ...+. + |...|.+++|+| +
T Consensus 159 ~~~~~~~~~~~~~-~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~-~------------H~~~V~~v~~sp------~~~~ 218 (297)
T 2pm7_B 159 EEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLE-G------------HSDWVRDVAWSP------TVLL 218 (297)
T ss_dssp -----------CC-EEEEEETTSCEEEEEEETTTTEEEEEEEEC-C------------CSSCEEEEEECC------CCSS
T ss_pred cccccCCCCCCcc-eEEEEcCCCcEEEEEEcCCCceEEEEEEec-C------------CCCceEEEEECC------CCCC
Confidence 34 799999999999999987763 23333 2 578999999999 5
Q ss_pred CCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEe
Q 017194 220 NKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFS 299 (375)
Q Consensus 220 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 299 (375)
+.+|++++.|+.|++||+.+.... ..........|...|.+++|+
T Consensus 219 ~~~las~s~D~~v~iWd~~~~~~~-----------------------------------~~~~~~~~~~~~~~v~~~~~s 263 (297)
T 2pm7_B 219 RSYMASVSQDRTCIIWTQDNEQGP-----------------------------------WKKTLLKEEKFPDVLWRASWS 263 (297)
T ss_dssp SEEEEEEETTSCEEEEEESSTTSC-----------------------------------CEEEESSSSCCSSCEEEEEEC
T ss_pred ceEEEEEECCCcEEEEEeCCCCCc-----------------------------------cceeeeecccCCCcEEEEEEC
Confidence 489999999999999998763110 001111224678899999999
Q ss_pred ecCCCCcEEEEecCCCeEEEEeCCC
Q 017194 300 MFGERGKYLISGGNDKLVKVWDCSR 324 (375)
Q Consensus 300 ~~~~~~~~l~s~~~dg~i~iwd~~~ 324 (375)
|++++|++++.||.|++|+...
T Consensus 264 ---~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 264 ---LSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp ---SSSCCEEEEETTSCEEEEEECT
T ss_pred ---CCCCEEEEEcCCCcEEEEEECC
Confidence 9999999999999999999764
No 52
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-43 Score=325.91 Aligned_cols=347 Identities=11% Similarity=0.041 Sum_probs=260.7
Q ss_pred cCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCc
Q 017194 13 GHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPAS 92 (375)
Q Consensus 13 ~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 92 (375)
.|..+|.+++|+| +++|++++.|++|++||+.+++.+..+. |...|++++|+|++++|++|+.||.|++||+++++.
T Consensus 56 ~~~~~V~~l~fsp--g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 56 EDRSAIKEMRFVK--GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQL 132 (902)
T ss_dssp SSCCCEEEEEEET--TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEE
T ss_pred CCCCCEEEEEEcC--CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 4788999999999 4699999999999999999999888886 678999999999999999999999999999987653
Q ss_pred cc-cc-------ccccCCCcceeEEEEcCC-CCeEEEEeCCCcEEEEeCcCceeeeeEecCc------------------
Q 017194 93 WR-PL-------ESYNYNKEEINQIVCNPK-SSFLACADDGGDVKIIDIRQHCLYKSLRAGH------------------ 145 (375)
Q Consensus 93 ~~-~~-------~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------------------ 145 (375)
.. .+ ....+|.++|.+++|+|+ +..+++|+.||.| +||+++++.+..+. .|
T Consensus 133 ~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~h 210 (902)
T 2oaj_A 133 SSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFI-YELPPFAPGGDFSEKTNEKR 210 (902)
T ss_dssp EEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEEC-CCBCTTCCCSTTCCCTTSCB
T ss_pred ccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEe-cccCCcCCCccccccccccc
Confidence 20 00 334678899999999996 4789999999999 99999999888886 55
Q ss_pred ccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEec-----C--------------------------CCCC--
Q 017194 146 SSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNF-----G--------------------------LPEN-- 192 (375)
Q Consensus 146 ~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-----~--------------------------~~~~-- 192 (375)
...|++++|+|++. +|++++.|+.|++||+++++++....+ + .|+.
T Consensus 211 ~~~V~~v~fspdg~-~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ 289 (902)
T 2oaj_A 211 TPKVIQSLYHPNSL-HIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTS 289 (902)
T ss_dssp CCCEEEEEECTTSS-EEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEE
T ss_pred CCCeEEEEEcCCCC-EEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCE
Confidence 47799999999998 799999999999999987765432100 0 0000
Q ss_pred ------CCC-----C-----------------------------Cc----------------------------------
Q 017194 193 ------NGN-----A-----------------------------GQ---------------------------------- 198 (375)
Q Consensus 193 ------~~~-----~-----------------------------~~---------------------------------- 198 (375)
... . ..
T Consensus 290 ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~ 369 (902)
T 2oaj_A 290 LLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILL 369 (902)
T ss_dssp EEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEE
T ss_pred EEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEE
Confidence 000 0 00
Q ss_pred -----------------c-----------cCCCceeEEeecCC----------------------------ccccCCCCE
Q 017194 199 -----------------C-----------YNPAFVHAIAIPDA----------------------------DMLDKTNKI 222 (375)
Q Consensus 199 -----------------~-----------~~~~~v~~~~~~~~----------------------------~~~~~~~~~ 222 (375)
+ .+...|+++++++. ..+.+++++
T Consensus 370 ~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~ 449 (902)
T 2oaj_A 370 ILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTA 449 (902)
T ss_dssp EETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEE
T ss_pred EcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcE
Confidence 0 00011222222110 011357889
Q ss_pred EEEEecCCcEEEEeCCCcceeec--cc--------ccCCCCCCceeecccccceeeee------eeecCCcc--------
Q 017194 223 CVVAKGDGVVDVINIESELNISR--SK--------STTKPLKGSQSTSKVNIRDAEME------ILDQSGGK-------- 278 (375)
Q Consensus 223 l~~~~~dg~i~i~d~~~~~~~~~--~~--------~~~~~~~~~~~~s~~g~~~~~~~------~~~~~~~~-------- 278 (375)
|++|+.|++|++||+.++..... .. ......+.+++|+|||+++++.+ .|+.....
T Consensus 450 laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~ 529 (902)
T 2oaj_A 450 FITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRP 529 (902)
T ss_dssp EEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC-------
T ss_pred EEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccC
Confidence 99999999999999987642110 00 13345688999999999998732 23322110
Q ss_pred ----------------------------------eeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCC
Q 017194 279 ----------------------------------RLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSR 324 (375)
Q Consensus 279 ----------------------------------~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~ 324 (375)
.++++..+.+|...|++++|| ||| +||+|+.|++|+|||+++
T Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafS---pdG-~lAsgs~D~tv~lwd~~~ 605 (902)
T 2oaj_A 530 ESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNS---NIG-FVGIAYAAGSLMLIDRRG 605 (902)
T ss_dssp --------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEEC---BTS-EEEEEETTSEEEEEETTT
T ss_pred CCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEec---CCc-EEEEEeCCCcEEEEECCC
Confidence 124567888999999999999 999 999999999999999988
Q ss_pred ceeeeecchhhhhhhhc-ccccceeeeeec-----CCCC---CcEEEeeCCCeEEEEec
Q 017194 325 FQGVQTSINNDLLIKNI-NLNKKVNWLCTT-----PTES---ENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 325 ~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~-----~~~~---~~l~s~~~dg~v~iw~~ 374 (375)
...... ..+..+. +|...|++++|+ | || ++|++++.|++|++|++
T Consensus 606 ~~~~~~----~~~~~~~~gh~~~V~sv~Fs~~~~~~-Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 606 PAIIYM----ENIREISGAQSACVTCIEFVIMEYGD-DGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp TEEEEE----EEGGGTCSSCCCCEEEEEEEEEECTT-SSSEEEEEEEEETTSEEEEEEE
T ss_pred CeEEEE----eehhHhccccccceEEEEEEEEecCC-CCCcceEEEEEecCCcEEEEEE
Confidence 643211 0113454 899999999999 8 64 89999999999999997
No 53
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.3e-43 Score=299.76 Aligned_cols=286 Identities=15% Similarity=0.177 Sum_probs=236.9
Q ss_pred ecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeee-cCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCC
Q 017194 12 RGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDV-GNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMP 90 (375)
Q Consensus 12 ~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~ 90 (375)
.+|...+.+..+.++ +..+++++.|+.|++||+.+++....+.. |...|.+++|+|++++|++++.||.|++||+.++
T Consensus 88 ~~~~~~~~~~~~~~s-~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~ 166 (401)
T 4aez_A 88 PGIIDDYYLNLLDWS-NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ 166 (401)
T ss_dssp TTCCCCTTCBCEEEC-TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCCcCCceEEEEeec-CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC
Confidence 366666444334433 34577888999999999999998877776 7899999999999999999999999999999876
Q ss_pred CcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCc-CceeeeeEecCcccceeEEEEeeCCCcEEEEeecCC
Q 017194 91 ASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIR-QHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDS 169 (375)
Q Consensus 91 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 169 (375)
+ .+..+.+|...|.+++| +++++++++.||.|++||++ ....+..+. +|...|.+++|+|++. +|++++.|+
T Consensus 167 ~---~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~s~~~d~ 239 (401)
T 4aez_A 167 T---KLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQ-GHSSEVCGLAWRSDGL-QLASGGNDN 239 (401)
T ss_dssp C---EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred e---EEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEc-CCCCCeeEEEEcCCCC-EEEEEeCCC
Confidence 4 34455578999999999 45799999999999999998 566778888 8999999999999998 799999999
Q ss_pred eEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe--cCCcEEEEeCCCcceeeccc
Q 017194 170 KLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK--GDGVVDVINIESELNISRSK 247 (375)
Q Consensus 170 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~ 247 (375)
.|++||+++++....+.. +...|.+++|+|. ...++++++ .|+.|++||+.++.
T Consensus 240 ~v~iwd~~~~~~~~~~~~-------------~~~~v~~~~~~p~-----~~~ll~~~~gs~d~~i~i~d~~~~~------ 295 (401)
T 4aez_A 240 VVQIWDARSSIPKFTKTN-------------HNAAVKAVAWCPW-----QSNLLATGGGTMDKQIHFWNAATGA------ 295 (401)
T ss_dssp CEEEEETTCSSEEEEECC-------------CSSCCCEEEECTT-----STTEEEEECCTTTCEEEEEETTTCC------
T ss_pred eEEEccCCCCCccEEecC-------------CcceEEEEEECCC-----CCCEEEEecCCCCCEEEEEECCCCC------
Confidence 999999999888777653 4678999999993 345666655 79999999998742
Q ss_pred ccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEE--ecCCCeEEEEeCCCc
Q 017194 248 STTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLIS--GGNDKLVKVWDCSRF 325 (375)
Q Consensus 248 ~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s--~~~dg~i~iwd~~~~ 325 (375)
.+..+. +...|.+++|+ |++++|++ |+.||.|++||+.++
T Consensus 296 ----------------------------------~~~~~~-~~~~v~~~~~s---~~~~~l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 296 ----------------------------------RVNTVD-AGSQVTSLIWS---PHSKEIMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp ----------------------------------EEEEEE-CSSCEEEEEEC---SSSSEEEEEECTTTCEEEEEEEETT
T ss_pred ----------------------------------EEEEEe-CCCcEEEEEEC---CCCCeEEEEeecCCCcEEEEecCCc
Confidence 222332 45789999999 99999998 558999999999986
Q ss_pred eeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 326 QGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
.. .....+.+|...|.+++|+| ++++|++++.||.|++|++.
T Consensus 338 ~~-------~~~~~~~~h~~~v~~~~~s~-dg~~l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 338 GL-------TKQVDIPAHDTRVLYSALSP-DGRILSTAASDENLKFWRVY 379 (401)
T ss_dssp EE-------EEEEEEECCSSCCCEEEECT-TSSEEEEECTTSEEEEEECC
T ss_pred cc-------eeEEEecCCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECC
Confidence 43 22234568999999999999 99999999999999999974
No 54
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.7e-43 Score=344.90 Aligned_cols=349 Identities=15% Similarity=0.136 Sum_probs=282.6
Q ss_pred CCCCCeeeecCCCceeEEEEecC-CCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeE
Q 017194 4 AEAKPRRLRGHKATATCCIASRD-RPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEV 82 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i 82 (375)
+++.+..+.+|...|.+++|+|+ ++.++++|+.|+.|++||+.+++....+.+|...|.+++|+|+++++++++.||.|
T Consensus 688 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v 767 (1249)
T 3sfz_A 688 TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTL 767 (1249)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEE
T ss_pred CCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeE
Confidence 56778889999999999999995 25689999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCCCcccccc----------------------------------------------------cccCCCcceeEEE
Q 017194 83 KSFDVHMPASWRPLE----------------------------------------------------SYNYNKEEINQIV 110 (375)
Q Consensus 83 ~iwd~~~~~~~~~~~----------------------------------------------------~~~~~~~~v~~~~ 110 (375)
++||+.+++....+. ...+|...|.+++
T Consensus 768 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~ 847 (1249)
T 3sfz_A 768 RLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCD 847 (1249)
T ss_dssp EEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEE
T ss_pred EEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEE
Confidence 999987653222111 0125778899999
Q ss_pred EcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCc---------
Q 017194 111 CNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRP--------- 181 (375)
Q Consensus 111 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--------- 181 (375)
|+|+++++++++.||.|++||+.+++.+..+. +|...|.+++|+|+++ .+++++.|+.|++||+.+...
T Consensus 848 ~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~h~~~v~~v~~spdg~-~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~ 925 (1249)
T 3sfz_A 848 FSPYDHLAVIALSQYCVELWNIDSRLKVADCR-GHLSWVHGVMFSPDGS-SFLTASDDQTIRVWETKKVCKNSAIVLKQE 925 (1249)
T ss_dssp ECSSTTEEEEECSSSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSS-EEEEEETTSCEEEEEHHHHHSCCSSSEEEE
T ss_pred EcCCCCEEEEEeCCCeEEEEEcCCCceeeecC-CCccceEEEEECCCCC-EEEEEeCCCeEEEEEccccceeeeecccce
Confidence 99999999999999999999999999999999 9999999999999998 799999999999999653100
Q ss_pred --------------------------------------ceEEecCC-------------------CCCCCCCCcccCCCc
Q 017194 182 --------------------------------------NKIVNFGL-------------------PENNGNAGQCYNPAF 204 (375)
Q Consensus 182 --------------------------------------~~~~~~~~-------------------~~~~~~~~~~~~~~~ 204 (375)
+..+.+.. +..........|...
T Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~ 1005 (1249)
T 3sfz_A 926 IDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKA 1005 (1249)
T ss_dssp EEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSC
T ss_pred eeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCc
Confidence 00000000 000000111236678
Q ss_pred eeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceee--eeeeecCCcceeEe
Q 017194 205 VHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAE--MEILDQSGGKRLHL 282 (375)
Q Consensus 205 v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~--~~~~~~~~~~~~~~ 282 (375)
|.+++|+| +++++++++.||.|++||+.++...... .....+..+.++|++..+.. .+....++....+.
T Consensus 1006 v~~l~~s~------dg~~l~s~~~dg~i~vwd~~~~~~~~~~--~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~ 1077 (1249)
T 3sfz_A 1006 VRHIQFTA------DGKTLISSSEDSVIQVWNWQTGDYVFLQ--AHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRI 1077 (1249)
T ss_dssp CCCEEECS------SSSCEEEECSSSBEEEEETTTTEEECCB--CCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCC
T ss_pred eEEEEECC------CCCEEEEEcCCCEEEEEECCCCceEEEe--cCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCce
Confidence 88999988 8999999999999999999987665332 34466778889998876654 12222223333345
Q ss_pred eeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEE
Q 017194 283 DYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVV 362 (375)
Q Consensus 283 ~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 362 (375)
...+.+|...|.+++|+ |++++|++++.||.|++||+.++ ..+..+.+|.+.|.+++|+| ++++|++
T Consensus 1078 ~~~~~~~~~~v~~~~~s---~d~~~l~s~s~d~~v~iwd~~~~---------~~~~~l~~h~~~v~~~~~s~-dg~~lat 1144 (1249)
T 3sfz_A 1078 ERDFTCHQGTVLSCAIS---SDATKFSSTSADKTAKIWSFDLL---------SPLHELKGHNGCVRCSAFSL-DGILLAT 1144 (1249)
T ss_dssp CEEEECCSSCCCCEEEC---SSSSSCEEECCSSCCCEECSSSS---------SCSBCCCCCSSCEEEEEECS-SSSEEEE
T ss_pred eEEEcccCCcEEEEEEC---CCCCEEEEEcCCCcEEEEECCCc---------ceeeeeccCCCcEEEEEECC-CCCEEEE
Confidence 56788899999999999 99999999999999999999988 66677889999999999999 9999999
Q ss_pred eeCCCeEEEEecC
Q 017194 363 CDTSKVVKVYSIS 375 (375)
Q Consensus 363 ~~~dg~v~iw~~~ 375 (375)
++.||.|++||++
T Consensus 1145 ~~~dg~i~vwd~~ 1157 (1249)
T 3sfz_A 1145 GDDNGEIRIWNVS 1157 (1249)
T ss_dssp EETTSCCCEEESS
T ss_pred EeCCCEEEEEECC
Confidence 9999999999974
No 55
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.5e-42 Score=285.77 Aligned_cols=264 Identities=17% Similarity=0.237 Sum_probs=212.5
Q ss_pred eEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCC--CCeEEEEeCCCcEEE
Q 017194 52 LVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPK--SSFLACADDGGDVKI 129 (375)
Q Consensus 52 ~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i 129 (375)
..+.+|...|.+++|+|+|++|++++.|++|++||+.... .+.+..+.+|..+|.+++|+++ +++|++++.|++|++
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~-~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET-HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC-BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC-cEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 4567899999999999999999999999999999997432 3456778899999999999874 889999999999999
Q ss_pred EeCcCce--eeeeEecCcccceeEEEEeeC--CCcEEEEeecCCeEEEeeCCCCCcc--eEEecCCCCCCCCCCcccCCC
Q 017194 130 IDIRQHC--LYKSLRAGHSSICSSVQFIPW--KPWEVISGGLDSKLVMWDFSKGRPN--KIVNFGLPENNGNAGQCYNPA 203 (375)
Q Consensus 130 wd~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 203 (375)
||+++++ .+..+. +|...|.+++|+|+ +. +|++++.|+.|++||++++... ..+. . |..
T Consensus 82 Wd~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~~~~~-~------------h~~ 146 (297)
T 2pm7_B 82 WKEENGRWSQIAVHA-VHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTSPIIID-A------------HAI 146 (297)
T ss_dssp EEBSSSCBCCCEEEC-CCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBCCEEEE-C------------CSS
T ss_pred EEcCCCceEEEEEee-cCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCceeeeeee-c------------ccC
Confidence 9998774 456677 89999999999997 66 7999999999999999876422 2332 3 567
Q ss_pred ceeEEeecCCccc-------cCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCC
Q 017194 204 FVHAIAIPDADML-------DKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSG 276 (375)
Q Consensus 204 ~v~~~~~~~~~~~-------~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~ 276 (375)
.|.+++|+|.... .+++++|++|+.|+.|++||+++..
T Consensus 147 ~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~----------------------------------- 191 (297)
T 2pm7_B 147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA----------------------------------- 191 (297)
T ss_dssp CEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTT-----------------------------------
T ss_pred ccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCC-----------------------------------
Confidence 8999999983100 0125799999999999999998642
Q ss_pred cceeEeeeeecCCCccEEEEEEeecCCC---CcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeec
Q 017194 277 GKRLHLDYSVGGHTAAASCVAFSMFGER---GKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTT 353 (375)
Q Consensus 277 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 353 (375)
....+...+.+|...|.+++|+ |+ +.+|++++.|++|++||++....... ..+.....|...|.+++|+
T Consensus 192 -~~~~~~~~l~~H~~~V~~v~~s---p~~~~~~~las~s~D~~v~iWd~~~~~~~~~----~~~~~~~~~~~~v~~~~~s 263 (297)
T 2pm7_B 192 -QTYVLESTLEGHSDWVRDVAWS---PTVLLRSYMASVSQDRTCIIWTQDNEQGPWK----KTLLKEEKFPDVLWRASWS 263 (297)
T ss_dssp -TEEEEEEEECCCSSCEEEEEEC---CCCSSSEEEEEEETTSCEEEEEESSTTSCCE----EEESSSSCCSSCEEEEEEC
T ss_pred -ceEEEEEEecCCCCceEEEEEC---CCCCCceEEEEEECCCcEEEEEeCCCCCccc----eeeeecccCCCcEEEEEEC
Confidence 1223455788999999999999 77 48999999999999999987421000 0111124678899999999
Q ss_pred CCCCCcEEEeeCCCeEEEEecC
Q 017194 354 PTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 354 ~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
| ++++|++++.||.|++|+.+
T Consensus 264 ~-~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 264 L-SGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp S-SSCCEEEEETTSCEEEEEEC
T ss_pred C-CCCEEEEEcCCCcEEEEEEC
Confidence 9 99999999999999999863
No 56
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.5e-43 Score=294.13 Aligned_cols=284 Identities=12% Similarity=0.104 Sum_probs=244.1
Q ss_pred CCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcc
Q 017194 14 HKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASW 93 (375)
Q Consensus 14 h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 93 (375)
|.++|.+++|+|+ +++++++..++.+.+|.............|...|.+++|+|++++|++++ |+.|++||+.+++..
T Consensus 8 ~~~~v~~~~~s~d-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~ 85 (337)
T 1gxr_A 8 GSKPAYSFHVTAD-GQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK 85 (337)
T ss_dssp EEEECCEEEECSS-SCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC
T ss_pred cCCceeEEEECCC-CCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCce
Confidence 5678999999999 89999888887777776655555555557999999999999999999998 999999999887655
Q ss_pred ccccccc--CCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCce--eeeeEecCcccceeEEEEeeCCCcEEEEeecCC
Q 017194 94 RPLESYN--YNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHC--LYKSLRAGHSSICSSVQFIPWKPWEVISGGLDS 169 (375)
Q Consensus 94 ~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 169 (375)
..+..+. .|...|.+++|+|++++|++++.|+.|++||+++++ ....+. .|...+.+++|+|+++ ++++++.|+
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~-~l~~~~~dg 163 (337)
T 1gxr_A 86 SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELT-SSAPACYALAISPDSK-VCFSCCSDG 163 (337)
T ss_dssp SCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEE-CSSSCEEEEEECTTSS-EEEEEETTS
T ss_pred eeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecc-cCCCceEEEEECCCCC-EEEEEeCCC
Confidence 5555444 678999999999999999999999999999999876 566777 8999999999999998 799999999
Q ss_pred eEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeeccccc
Q 017194 170 KLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKST 249 (375)
Q Consensus 170 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 249 (375)
.|++||+++++.+..+.. |...+.+++|+| +++++++++.||.|++||+++++.
T Consensus 164 ~v~~~d~~~~~~~~~~~~-------------~~~~i~~~~~~~------~~~~l~~~~~dg~i~~~d~~~~~~------- 217 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQG-------------HTDGASCIDISN------DGTKLWTGGLDNTVRSWDLREGRQ------- 217 (337)
T ss_dssp CEEEEETTTTEEEEEECC-------------CSSCEEEEEECT------TSSEEEEEETTSEEEEEETTTTEE-------
T ss_pred cEEEEeCCCCceeeeeec-------------ccCceEEEEECC------CCCEEEEEecCCcEEEEECCCCce-------
Confidence 999999999888777763 467899999999 799999999999999999997421
Q ss_pred CCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeee
Q 017194 250 TKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQ 329 (375)
Q Consensus 250 ~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 329 (375)
...+ .+...+.+++|+ |++++|++++.|+.|++||+.+.+
T Consensus 218 ---------------------------------~~~~-~~~~~v~~~~~s---~~~~~l~~~~~~~~i~~~~~~~~~--- 257 (337)
T 1gxr_A 218 ---------------------------------LQQH-DFTSQIFSLGYC---PTGEWLAVGMESSNVEVLHVNKPD--- 257 (337)
T ss_dssp ---------------------------------EEEE-ECSSCEEEEEEC---TTSSEEEEEETTSCEEEEETTSSC---
T ss_pred ---------------------------------Eeee-cCCCceEEEEEC---CCCCEEEEEcCCCcEEEEECCCCC---
Confidence 1122 356789999999 999999999999999999999863
Q ss_pred ecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 330 TSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 330 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
. .....|...|.+++|+| ++++|++++.||.|++|+++
T Consensus 258 ------~-~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~ 295 (337)
T 1gxr_A 258 ------K-YQLHLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTP 295 (337)
T ss_dssp ------E-EEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETT
T ss_pred ------e-EEEcCCccceeEEEECC-CCCEEEEecCCCcEEEEECC
Confidence 2 24567899999999999 99999999999999999974
No 57
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-43 Score=292.60 Aligned_cols=255 Identities=16% Similarity=0.205 Sum_probs=203.0
Q ss_pred Ceee-ec-CCCceeEEEEecCCCCEEEEeCCCCcEEEEeccc-------CceeeEeeecCccEEEEEEeCCCCeEEEEcC
Q 017194 8 PRRL-RG-HKATATCCIASRDRPGFVASSGEDGCICWFDLRS-------KDVQLVTDVGNGPVTSLCFKSGNEDIIYVSS 78 (375)
Q Consensus 8 ~~~l-~~-h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~-------~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~ 78 (375)
+..+ .+ |.+.|++++|+|+ +++|++|+.|++|+|||+.. .+.+..+.+|...|.+++|+|++++|++++.
T Consensus 49 ~~~~~~~~h~~~v~~v~~sp~-~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~ 127 (330)
T 2hes_X 49 IDVLDETAHKKAIRSVAWRPH-TSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSR 127 (330)
T ss_dssp EEEECTTCCCSCEEEEEECTT-SSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEET
T ss_pred EEEEecCCccCCEEEEEECCC-CCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeC
Confidence 3445 34 9999999999999 89999999999999999853 3456778899999999999999999999999
Q ss_pred CCeEEEEECCC-CCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCc--eeeeeEecCcccceeEEEEe
Q 017194 79 GKEVKSFDVHM-PASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQH--CLYKSLRAGHSSICSSVQFI 155 (375)
Q Consensus 79 d~~i~iwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~v~~~~~~ 155 (375)
|++|++||+.. +...+.+..+.+|...|.+++|+|++++|++++.|++|++||..++ +.+..+. +|...|.+++|+
T Consensus 128 D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~-~h~~~v~~~~~~ 206 (330)
T 2hes_X 128 DKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLN-GHEGTVWSSDFD 206 (330)
T ss_dssp TSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEEC
T ss_pred CCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEcc-CCCCcEEEEEec
Confidence 99999999953 3334556677889999999999999999999999999999998766 6778888 999999999999
Q ss_pred eC--CCcEEEEeecCCeEEEeeCCCCCc--------ceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEE
Q 017194 156 PW--KPWEVISGGLDSKLVMWDFSKGRP--------NKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVV 225 (375)
Q Consensus 156 ~~--~~~~l~~~~~d~~i~~wd~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~ 225 (375)
|+ +. .|++++.|++|++||++.+.. ...+... |...|.+++|++ +.+|++
T Consensus 207 ~~~~~~-~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~------------h~~~v~~v~~s~-------~~~l~s 266 (330)
T 2hes_X 207 KTEGVF-RLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDV------------HKRQVYNVAWGF-------NGLIAS 266 (330)
T ss_dssp CSSSSC-EEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSC------------CSSCEEEEEECT-------TSCEEE
T ss_pred CCCCee-EEEEEeCCCeEEEEEecCCCccccceeEEeeecccc------------cccceEEEEEcC-------CCEEEE
Confidence 98 44 799999999999999875421 1111111 567899999997 458999
Q ss_pred EecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCc-cEEEEEEeecCC-
Q 017194 226 AKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTA-AASCVAFSMFGE- 303 (375)
Q Consensus 226 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~- 303 (375)
++.||.|++||..++.. ........+|.. .|.+++|+ |
T Consensus 267 ~~~dg~v~iw~~~~~~~-------------------------------------~~~~~~~~~h~~~~v~~v~~~---~~ 306 (330)
T 2hes_X 267 VGADGVLAVYEEVDGEW-------------------------------------KVFAKRALCHGVYEINVVKWL---EL 306 (330)
T ss_dssp EETTSCEEEEEEETTEE-------------------------------------EEEEEESCTTTTSCEEEEEEC-----
T ss_pred EeCCCEEEEEEcCCCce-------------------------------------EEEeccccccccceEEEEEEe---cC
Confidence 99999999999875310 011123457776 89999999 6
Q ss_pred -CCcEEEEecCCCeEEEEeCCC
Q 017194 304 -RGKYLISGGNDKLVKVWDCSR 324 (375)
Q Consensus 304 -~~~~l~s~~~dg~i~iwd~~~ 324 (375)
++++|++|+.||.|++||++.
T Consensus 307 ~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 307 NGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp ---CCEEEEETTSEEEEEEC--
T ss_pred CCceEEEEecCCCcEEEEEecc
Confidence 688999999999999999875
No 58
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.3e-41 Score=296.53 Aligned_cols=320 Identities=15% Similarity=0.178 Sum_probs=258.7
Q ss_pred CCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEE
Q 017194 6 AKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSF 85 (375)
Q Consensus 6 ~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iw 85 (375)
+..+.+.+|.+.|.. ++.++ +++|++|+.||+|++||+.+++.+..+.+|...|.+++|+ ++.+++++.|+.|++|
T Consensus 109 ~~~~~l~~h~~~v~~-~~~~~-g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vw 184 (445)
T 2ovr_B 109 KSPKVLKGHDDHVIT-CLQFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVW 184 (445)
T ss_dssp CCCEEEECSTTSCEE-EEEEE-TTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEE
T ss_pred ceeEEecccCCCcEE-EEEEc-CCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEE
Confidence 456789999998643 34555 7899999999999999999999999999999999999998 5689999999999999
Q ss_pred ECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEe
Q 017194 86 DVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISG 165 (375)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 165 (375)
|+.+++ .+..+.+|...|.++.|+ ++.+++++.||.|++||+++++.+..+. +|...|.+++| ++. .++++
T Consensus 185 d~~~~~---~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~-~~~~~v~~~~~--~~~-~l~~~ 255 (445)
T 2ovr_B 185 NAETGE---CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLM-GHVAAVRCVQY--DGR-RVVSG 255 (445)
T ss_dssp ETTTTE---EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEE-CCSSCEEEEEE--CSS-CEEEE
T ss_pred ECCcCc---EEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEc-CCcccEEEEEE--CCC-EEEEE
Confidence 998764 445566789999999995 5689999999999999999999999999 99999999999 555 79999
Q ss_pred ecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeec
Q 017194 166 GLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISR 245 (375)
Q Consensus 166 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 245 (375)
+.||.|++||+++++.+..+.. |...+.++++ ++..+++++.||.|++||+++++....
T Consensus 256 ~~dg~i~iwd~~~~~~~~~~~~-------------~~~~v~~~~~--------~~~~l~~~~~d~~i~i~d~~~~~~~~~ 314 (445)
T 2ovr_B 256 AYDFMVKVWDPETETCLHTLQG-------------HTNRVYSLQF--------DGIHVVSGSLDTSIRVWDVETGNCIHT 314 (445)
T ss_dssp ETTSCEEEEEGGGTEEEEEECC-------------CSSCEEEEEE--------CSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred cCCCEEEEEECCCCcEeEEecC-------------CCCceEEEEE--------CCCEEEEEeCCCeEEEEECCCCCEEEE
Confidence 9999999999999988887763 4678999998 488999999999999999998876655
Q ss_pred ccccCCCCCCceeecccccceeeee------eeecCCcceeEeeeeec---CCCccEEEEEEeecCCCCcEEEEecCCCe
Q 017194 246 SKSTTKPLKGSQSTSKVNIRDAEME------ILDQSGGKRLHLDYSVG---GHTAAASCVAFSMFGERGKYLISGGNDKL 316 (375)
Q Consensus 246 ~~~~~~~~~~~~~~s~~g~~~~~~~------~~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~~~~l~s~~~dg~ 316 (375)
.... ... ...+.+++..+++.+ .++.... +.+..+. .|...|.+++|+ +++|++|+.||.
T Consensus 315 ~~~~-~~~--v~~~~~~~~~l~~~~~dg~i~vwd~~~~---~~~~~~~~~~~~~~~v~~~~~~-----~~~l~s~~~dg~ 383 (445)
T 2ovr_B 315 LTGH-QSL--TSGMELKDNILVSGNADSTVKIWDIKTG---QCLQTLQGPNKHQSAVTCLQFN-----KNFVITSSDDGT 383 (445)
T ss_dssp ECCC-CSC--EEEEEEETTEEEEEETTSCEEEEETTTC---CEEEEECSTTSCSSCEEEEEEC-----SSEEEEEETTSE
T ss_pred EcCC-ccc--EEEEEEeCCEEEEEeCCCeEEEEECCCC---cEEEEEccCCCCCCCEEEEEEC-----CCEEEEEeCCCe
Confidence 4432 222 234455677766522 3333333 3344454 488999999986 479999999999
Q ss_pred EEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCe----EEEEecC
Q 017194 317 VKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKV----VKVYSIS 375 (375)
Q Consensus 317 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~----v~iw~~~ 375 (375)
|++||+.+++...... .....+|.+.|.+++|+| ++.+|++++.||. |.+||++
T Consensus 384 v~iwd~~~~~~~~~~~----~~~~~~~~~~v~~~~~s~-~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 384 VKLWDLKTGEFIRNLV----TLESGGSGGVVWRIRASN-TKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp EEEEETTTCCEEEEEE----ECTTGGGTCEEEEEEECS-SEEEEEEECSSSSSCCEEEEEECC
T ss_pred EEEEECCCCceeeeee----ccccCCCCceEEEEEecC-CEEEEEEcccCCCCccEEEEEECC
Confidence 9999999984331100 001146889999999999 9999999999997 9999984
No 59
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.6e-42 Score=289.60 Aligned_cols=252 Identities=15% Similarity=0.181 Sum_probs=221.1
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccC------ceeeEeeecCccEEEEEEeCCCCeEEEEc
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSK------DVQLVTDVGNGPVTSLCFKSGNEDIIYVS 77 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~------~~~~~~~~~~~~v~~l~~~~~~~~l~~~~ 77 (375)
+++....+..|...|.+++|+|+ +.+|++|+.|+.+++|++... .....+..|...|.+++|+|++..|++++
T Consensus 95 ~~~~~~~~~~~~~~v~~~~~sp~-g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s 173 (354)
T 2pbi_B 95 TTNKEHAVTMPCTWVMACAYAPS-GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTAS 173 (354)
T ss_dssp TCCEEEEEECSSSCCCEEEECTT-SSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEE
T ss_pred CCCcceEEecCCCCEEEEEECCC-CCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEe
Confidence 34556678889999999999999 899999999999999998643 33567788999999999999999999999
Q ss_pred CCCeEEEEECCCCCcccccccccCCCcceeEEEEcC--CCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEe
Q 017194 78 SGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNP--KSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFI 155 (375)
Q Consensus 78 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~ 155 (375)
.|++|++||+++++ .+..+.+|...|.+++|+| ++++|++|+.||.|++||+++++.+..+. +|...|++++|+
T Consensus 174 ~D~~v~lwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~ 249 (354)
T 2pbi_B 174 GDGTCALWDVESGQ---LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE-THESDVNSVRYY 249 (354)
T ss_dssp TTSEEEEEETTTCC---EEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEEC
T ss_pred CCCcEEEEeCCCCe---EEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCCeEEEEEe
Confidence 99999999998764 4556677899999999988 46899999999999999999999999999 999999999999
Q ss_pred eCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEE
Q 017194 156 PWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVI 235 (375)
Q Consensus 156 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~ 235 (375)
|++. .|++++.|++|++||++.++.+..+.... +...+.+++|+| ++++|++|+.|+.|++|
T Consensus 250 p~~~-~l~s~s~D~~v~lwd~~~~~~~~~~~~~~-----------~~~~~~~~~~s~------~g~~l~~g~~d~~i~vw 311 (354)
T 2pbi_B 250 PSGD-AFASGSDDATCRLYDLRADREVAIYSKES-----------IIFGASSVDFSL------SGRLLFAGYNDYTINVW 311 (354)
T ss_dssp TTSS-EEEEEETTSCEEEEETTTTEEEEEECCTT-----------CCSCEEEEEECT------TSSEEEEEETTSCEEEE
T ss_pred CCCC-EEEEEeCCCeEEEEECCCCcEEEEEcCCC-----------cccceeEEEEeC------CCCEEEEEECCCcEEEE
Confidence 9998 79999999999999999887666554220 234688999999 89999999999999999
Q ss_pred eCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCC
Q 017194 236 NIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDK 315 (375)
Q Consensus 236 d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg 315 (375)
|+.++ ..+..+.+|...|.+++|+ |+|++|++|+.||
T Consensus 312 d~~~~----------------------------------------~~~~~l~~h~~~v~~l~~s---pdg~~l~sgs~D~ 348 (354)
T 2pbi_B 312 DVLKG----------------------------------------SRVSILFGHENRVSTLRVS---PDGTAFCSGSWDH 348 (354)
T ss_dssp ETTTC----------------------------------------SEEEEECCCSSCEEEEEEC---TTSSCEEEEETTS
T ss_pred ECCCC----------------------------------------ceEEEEECCCCcEEEEEEC---CCCCEEEEEcCCC
Confidence 99864 2334677999999999999 9999999999999
Q ss_pred eEEEEe
Q 017194 316 LVKVWD 321 (375)
Q Consensus 316 ~i~iwd 321 (375)
.|++|+
T Consensus 349 ~v~vW~ 354 (354)
T 2pbi_B 349 TLRVWA 354 (354)
T ss_dssp EEEEEC
T ss_pred CEEecC
Confidence 999996
No 60
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.4e-42 Score=287.95 Aligned_cols=261 Identities=18% Similarity=0.263 Sum_probs=214.7
Q ss_pred CCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEE
Q 017194 7 KPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFD 86 (375)
Q Consensus 7 ~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd 86 (375)
....+.+|...|++++|+|+ +.+|++|+.|++|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 68 ~~~~l~~h~~~V~~~~~~~~-~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd 146 (343)
T 2xzm_R 68 PHKALTGHNHFVSDLALSQE-NCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWN 146 (343)
T ss_dssp EEEEECCCSSCEEEEEECSS-TTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEE
T ss_pred ccchhccCCCceEEEEECCC-CCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEe
Confidence 45678999999999999998 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccccccCCCcceeEEEEcCCC----------CeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEee
Q 017194 87 VHMPASWRPLESYNYNKEEINQIVCNPKS----------SFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIP 156 (375)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 156 (375)
+... ..........|...|.+++|+|++ .+|++++.|+.|++||. +.+....+. +|...|.+++|+|
T Consensus 147 ~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~-~h~~~v~~~~~s~ 223 (343)
T 2xzm_R 147 ILGE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFK-AHESNVNHLSISP 223 (343)
T ss_dssp SSSC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEE-CCSSCEEEEEECT
T ss_pred ccCC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEc-CccccceEEEECC
Confidence 9732 223333344678899999999986 78999999999999994 566777888 8999999999999
Q ss_pred CCCcEEEEeecCCeEEEeeCCC-CCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEE
Q 017194 157 WKPWEVISGGLDSKLVMWDFSK-GRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVI 235 (375)
Q Consensus 157 ~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~ 235 (375)
+++ +|++++.|+.|++||++. ......+.. ...|.+++|+| ++.+++++ .|+.|++|
T Consensus 224 ~g~-~l~sgs~dg~v~iwd~~~~~~~~~~~~~--------------~~~v~~v~~sp------~~~~la~~-~d~~v~iw 281 (343)
T 2xzm_R 224 NGK-YIATGGKDKKLLIWDILNLTYPQREFDA--------------GSTINQIAFNP------KLQWVAVG-TDQGVKIF 281 (343)
T ss_dssp TSS-EEEEEETTCEEEEEESSCCSSCSEEEEC--------------SSCEEEEEECS------SSCEEEEE-ESSCEEEE
T ss_pred CCC-EEEEEcCCCeEEEEECCCCcccceeecC--------------CCcEEEEEECC------CCCEEEEE-CCCCEEEE
Confidence 998 799999999999999954 444444442 35799999999 67777654 57789999
Q ss_pred eCCCcceee--cccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecC
Q 017194 236 NIESELNIS--RSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGN 313 (375)
Q Consensus 236 d~~~~~~~~--~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~ 313 (375)
|+.+..... ..... .........+|...|.+++|+ |+|++|++|+.
T Consensus 282 ~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~v~~~~~s---p~g~~l~sg~~ 329 (343)
T 2xzm_R 282 NLMTQSKAPVCTIEAE-----------------------------PITKAEGQKGKNPQCTSLAWN---ALGKKLFAGFT 329 (343)
T ss_dssp ESSSCCSCSEEECCCC-----------------------------SGGGBTTBCCSCCCEEEEEEC---SSSCCEEEEET
T ss_pred EeCCCCCCceEEeecC-----------------------------cchhhhhhcCCCCceEEEEEC---CCCCeEEEecC
Confidence 998753221 00000 000011234788899999999 99999999999
Q ss_pred CCeEEEEeCCCc
Q 017194 314 DKLVKVWDCSRF 325 (375)
Q Consensus 314 dg~i~iwd~~~~ 325 (375)
||.|++|+++++
T Consensus 330 Dg~v~~w~~~~g 341 (343)
T 2xzm_R 330 DGVIRTFSFETS 341 (343)
T ss_dssp TSEEEEEEEEEE
T ss_pred CceEEEEEEEcc
Confidence 999999998765
No 61
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.2e-42 Score=291.76 Aligned_cols=251 Identities=16% Similarity=0.159 Sum_probs=204.9
Q ss_pred CeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceee----EeeecCccEEEEEEeCCCCeEEEEcCCCeEE
Q 017194 8 PRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQL----VTDVGNGPVTSLCFKSGNEDIIYVSSGKEVK 83 (375)
Q Consensus 8 ~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~ 83 (375)
.....+|...|++++|+|+ +. +++++.||+|+|||+.+++... ...+|...|.+++|+|++++|++++.|+.|+
T Consensus 87 ~~~~~~~~~~V~~~~~s~d-~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~ 164 (357)
T 4g56_B 87 CTAGVQTEAGVTDVAWVSE-KG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVK 164 (357)
T ss_dssp CSEEEECSSCEEEEEEETT-TE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred ecccCCCCCCEEEEEEcCC-CC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 3445679999999999998 54 5567789999999998877533 3347899999999999999999999999999
Q ss_pred EEECCCCCcccccccccCCCcceeEEEEcCCCC-eEEEEeCCCcEEEEeCcCceeeeeEec-CcccceeEEEEeeCCCcE
Q 017194 84 SFDVHMPASWRPLESYNYNKEEINQIVCNPKSS-FLACADDGGDVKIIDIRQHCLYKSLRA-GHSSICSSVQFIPWKPWE 161 (375)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~ 161 (375)
+||+++++ .+..+.+|...|.+++|+|++. ++++++.|+.|++||+++++....+.. .|...+.+++|+|++..+
T Consensus 165 iwd~~~~~---~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~ 241 (357)
T 4g56_B 165 VWDLSQKA---VLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDT 241 (357)
T ss_dssp EEETTTTE---EEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTE
T ss_pred EEECCCCc---EEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccce
Confidence 99998754 4555677899999999999875 789999999999999998877665431 466789999999987668
Q ss_pred EEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcc
Q 017194 162 VISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESEL 241 (375)
Q Consensus 162 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 241 (375)
|++|+.|+.|++||+++++.+..+.. +...|++++|+|. .+++|++|+.|+.|++||++++
T Consensus 242 la~g~~d~~i~~wd~~~~~~~~~~~~-------------~~~~v~~l~~sp~-----~~~~lasgs~D~~i~iwd~~~~- 302 (357)
T 4g56_B 242 FACGDETGNVSLVNIKNPDSAQTSAV-------------HSQNITGLAYSYH-----SSPFLASISEDCTVAVLDADFS- 302 (357)
T ss_dssp EEEEESSSCEEEEESSCGGGCEEECC-------------CSSCEEEEEECSS-----SSCCEEEEETTSCEEEECTTSC-
T ss_pred EEEeecccceeEEECCCCcEeEEEec-------------cceeEEEEEEcCC-----CCCEEEEEeCCCEEEEEECCCC-
Confidence 99999999999999999998888763 4678999999993 3468999999999999999874
Q ss_pred eeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCC-CCcEEEEecCCCeEEEE
Q 017194 242 NISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGE-RGKYLISGGNDKLVKVW 320 (375)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~~~~l~s~~~dg~i~iw 320 (375)
+++ ...+|...|++++|+ | ++++|++++.||+|++|
T Consensus 303 ---------------------------------------~~~-~~~~H~~~V~~vafs---P~d~~~l~s~s~Dg~v~iW 339 (357)
T 4g56_B 303 ---------------------------------------EVF-RDLSHRDFVTGVAWS---PLDHSKFTTVGWDHKVLHH 339 (357)
T ss_dssp ---------------------------------------EEE-EECCCSSCEEEEEEC---SSSTTEEEEEETTSCEEEE
T ss_pred ---------------------------------------cEe-EECCCCCCEEEEEEe---CCCCCEEEEEcCCCeEEEE
Confidence 222 334799999999999 6 78999999999999999
Q ss_pred eCCCc
Q 017194 321 DCSRF 325 (375)
Q Consensus 321 d~~~~ 325 (375)
++.+.
T Consensus 340 ~~~~~ 344 (357)
T 4g56_B 340 HLPSE 344 (357)
T ss_dssp ECC--
T ss_pred ECCCC
Confidence 99775
No 62
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.3e-43 Score=290.94 Aligned_cols=254 Identities=16% Similarity=0.223 Sum_probs=204.6
Q ss_pred eeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCc--eeeEeeecCccEEEEEEeC--CCCeEEEEcCCCeEEE
Q 017194 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKD--VQLVTDVGNGPVTSLCFKS--GNEDIIYVSSGKEVKS 84 (375)
Q Consensus 9 ~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~l~~~~--~~~~l~~~~~d~~i~i 84 (375)
..+.+|.++|++++|+|+ +++||+|+.|++|+|||+.+++ .+..+.+|..+|.+++|+| ++++|++++.|++|++
T Consensus 7 ~~~~~H~~~V~~v~~s~~-g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYY-GTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp -------CCEEEEEECGG-GCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred eecccccCeEEEeeEcCC-CCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 356799999999999999 8999999999999999998775 4677889999999999986 4889999999999999
Q ss_pred EECCCCCcccccccccCCCcceeEEEEcCC--CCeEEEEeCCCcEEEEeCcCcee---eeeEecCcccceeEEEEeeCC-
Q 017194 85 FDVHMPASWRPLESYNYNKEEINQIVCNPK--SSFLACADDGGDVKIIDIRQHCL---YKSLRAGHSSICSSVQFIPWK- 158 (375)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~- 158 (375)
||+++++ ......+.+|...|.+++|+|+ +.+|++++.|+.|++||++.+.. ...+. +|...|.+++|+|+.
T Consensus 86 Wd~~~~~-~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~ 163 (316)
T 3bg1_A 86 WREENGT-WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINN-AHTIGCNAVSWAPAVV 163 (316)
T ss_dssp ECCSSSC-CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTT-SSSSCBCCCEECCCCC
T ss_pred EECCCCc-ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeec-cccCCcceEEEccccC
Confidence 9998653 2344556788999999999997 78999999999999999986532 34455 899999999999973
Q ss_pred ----------------CcEEEEeecCCeEEEeeCCCCC---cceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCC
Q 017194 159 ----------------PWEVISGGLDSKLVMWDFSKGR---PNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKT 219 (375)
Q Consensus 159 ----------------~~~l~~~~~d~~i~~wd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 219 (375)
. +|++++.|+.|++||++... +...+. + |...|.+++|+| +
T Consensus 164 ~~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~~l~-~------------h~~~V~~v~~sp------~ 223 (316)
T 3bg1_A 164 PGSLIDHPSGQKPNYIK-RFASGGCDNLIKLWKEEEDGQWKEEQKLE-A------------HSDWVRDVAWAP------S 223 (316)
T ss_dssp C------CCSCCCCCCC-BEECCBTTSBCCEEEECTTSCEEEEECCB-C------------CSSCEEEEECCC------C
T ss_pred CccccccccccCccccc-eEEEecCCCeEEEEEeCCCCccceeeecc-c------------CCCceEEEEecC------C
Confidence 4 79999999999999997553 222232 2 578899999999 4
Q ss_pred C----CEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEE
Q 017194 220 N----KICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASC 295 (375)
Q Consensus 220 ~----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 295 (375)
+ .+|++++.||.|++||+.+..... .....+..|...|.+
T Consensus 224 ~~~~~~~las~s~D~~v~iw~~~~~~~~~------------------------------------~~~~~~~~~~~~v~~ 267 (316)
T 3bg1_A 224 IGLPTSTIASCSQDGRVFIWTCDDASSNT------------------------------------WSPKLLHKFNDVVWH 267 (316)
T ss_dssp SSCSCCEEEEEETTCEEEEEECSSTTCCC------------------------------------CBCCEEEECSSCEEE
T ss_pred CCCCCceEEEEcCCCeEEEEEccCccccc------------------------------------hhhhhhhcCCCcEEE
Confidence 4 889999999999999987521000 001133467889999
Q ss_pred EEEeecCCCCcEEEEecCCCeEEEEeCCC
Q 017194 296 VAFSMFGERGKYLISGGNDKLVKVWDCSR 324 (375)
Q Consensus 296 ~~~s~~~~~~~~l~s~~~dg~i~iwd~~~ 324 (375)
++|+ |++++|++++.|+.|++|+...
T Consensus 268 v~~s---p~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 268 VSWS---ITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEC---TTTCCEEEEESSSCEEEEEECT
T ss_pred EEEc---CCCCEEEEEcCCCeEEEEEECC
Confidence 9999 9999999999999999999764
No 63
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.6e-41 Score=297.79 Aligned_cols=282 Identities=19% Similarity=0.315 Sum_probs=240.6
Q ss_pred CCeeeecCCCce-eEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEE
Q 017194 7 KPRRLRGHKATA-TCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSF 85 (375)
Q Consensus 7 ~~~~l~~h~~~i-~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iw 85 (375)
....+++|.+.| .++.+ + +++|++|+.||+|++||+.+++.+..+.+|...|.+++|+|++ .+++++.|++|++|
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~-~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--E-DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVW 188 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--E-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEE
T ss_pred ceEEEcCCCCCcEEEEEE--C-CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEE
Confidence 346889999886 55555 4 5799999999999999999999999999999999999999988 89999999999999
Q ss_pred ECCCCCcccccccccCCCcceeEEEEc--CCCCeEEEEeCCCcEEEEeCcCcee-----------------------eee
Q 017194 86 DVHMPASWRPLESYNYNKEEINQIVCN--PKSSFLACADDGGDVKIIDIRQHCL-----------------------YKS 140 (375)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~dg~i~iwd~~~~~~-----------------------~~~ 140 (375)
|+++++ .+..+.+|...|.+++|+ ++++++++++.|+.|++||+++++. +..
T Consensus 189 d~~~~~---~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (464)
T 3v7d_B 189 DIKKGC---CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV 265 (464)
T ss_dssp ETTTTE---EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEE
T ss_pred ECCCCc---EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEE
Confidence 999764 445566789999999998 5778999999999999999987653 345
Q ss_pred EecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCC
Q 017194 141 LRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTN 220 (375)
Q Consensus 141 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 220 (375)
+. +|...+.++ +++++ ++++++.|+.|++||+++++++..+.. |...+.+++|+| ++
T Consensus 266 ~~-~~~~~v~~~--~~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~-------------~~~~v~~~~~~~------~~ 322 (464)
T 3v7d_B 266 LR-GHMASVRTV--SGHGN-IVVSGSYDNTLIVWDVAQMKCLYILSG-------------HTDRIYSTIYDH------ER 322 (464)
T ss_dssp EC-CCSSCEEEE--EEETT-EEEEEETTSCEEEEETTTTEEEEEECC-------------CSSCEEEEEEET------TT
T ss_pred cc-CccceEEEE--cCCCC-EEEEEeCCCeEEEEECCCCcEEEEecC-------------CCCCEEEEEEcC------CC
Confidence 56 788888877 56676 799999999999999999988887763 468899999999 79
Q ss_pred CEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEee
Q 017194 221 KICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSM 300 (375)
Q Consensus 221 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 300 (375)
+++++|+.||.|++||++++ +++..+.+|...|.+++|+
T Consensus 323 ~~l~sg~~dg~i~vwd~~~~----------------------------------------~~~~~~~~h~~~v~~~~~~- 361 (464)
T 3v7d_B 323 KRCISASMDTTIRIWDLENG----------------------------------------ELMYTLQGHTALVGLLRLS- 361 (464)
T ss_dssp TEEEEEETTSCEEEEETTTT----------------------------------------EEEEEECCCSSCEEEEEEC-
T ss_pred CEEEEEeCCCcEEEEECCCC----------------------------------------cEEEEEeCCCCcEEEEEEc-
Confidence 99999999999999999874 4556788999999999986
Q ss_pred cCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 301 FGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 301 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
+++|++++.||.|++||+.+.... ....+...+..++|++ ++++|++++ ||.|++||++
T Consensus 362 ----~~~l~s~s~dg~v~vwd~~~~~~~----------~~~~~~~~~~~~~~~~-~~~~l~~~~-dg~i~iwd~~ 420 (464)
T 3v7d_B 362 ----DKFLVSAAADGSIRGWDANDYSRK----------FSYHHTNLSAITTFYV-SDNILVSGS-ENQFNIYNLR 420 (464)
T ss_dssp ----SSEEEEEETTSEEEEEETTTCCEE----------EEEECTTCCCEEEEEE-CSSEEEEEE-TTEEEEEETT
T ss_pred ----CCEEEEEeCCCcEEEEECCCCcee----------eeecCCCCccEEEEEe-CCCEEEEec-CCeEEEEECC
Confidence 479999999999999999987421 2224666778888998 889999988 8999999974
No 64
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.1e-42 Score=294.14 Aligned_cols=307 Identities=13% Similarity=0.113 Sum_probs=236.9
Q ss_pred CCCCCeeeecCCCceeEEEEecCC--CCEEEEeCCCCcEEEEeccc-Ccee-eEeeecCccEEEEEEeCCCCeEEEEcCC
Q 017194 4 AEAKPRRLRGHKATATCCIASRDR--PGFVASSGEDGCICWFDLRS-KDVQ-LVTDVGNGPVTSLCFKSGNEDIIYVSSG 79 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~--~~~l~s~~~d~~i~iw~~~~-~~~~-~~~~~~~~~v~~l~~~~~~~~l~~~~~d 79 (375)
..+.+..+++|.+.|++++|+|++ +++|++|+.||.|++||+.+ +..+ ..+..|...|.+++|+|++++|++++.|
T Consensus 28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 107 (368)
T 3mmy_A 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD 107 (368)
T ss_dssp TTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred CcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC
Confidence 345567788999999999999985 58999999999999999997 5544 7788999999999999999999999999
Q ss_pred CeEEEEECCCCCcccccccccCCCcceeEEEE--cCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeC
Q 017194 80 KEVKSFDVHMPASWRPLESYNYNKEEINQIVC--NPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPW 157 (375)
Q Consensus 80 ~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 157 (375)
+.|++||+++++... ...|...|.+++| +|++++|++++.||.|++||+++++.+..+. .+ ..+.++.+.++
T Consensus 108 g~v~iwd~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~-~~~~~~~~~~~ 181 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQ----IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQ-LP-ERCYCADVIYP 181 (368)
T ss_dssp SEEEEEETTTTEEEE----EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEE-CS-SCEEEEEEETT
T ss_pred CcEEEEEcCCCCcee----eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEe-cC-CCceEEEecCC
Confidence 999999999765332 3457899999999 8999999999999999999999999998888 55 46666666644
Q ss_pred CCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeC
Q 017194 158 KPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINI 237 (375)
Q Consensus 158 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 237 (375)
.+++++.++.+++||++........... ........+++.+.... ....+++++.||.|++||+
T Consensus 182 ---~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~--~~~~~~~~~~dg~i~i~~~ 245 (368)
T 3mmy_A 182 ---MAVVATAERGLIVYQLENQPSEFRRIES-----------PLKHQHRCVAIFKDKQN--KPTGFALGSIEGRVAIHYI 245 (368)
T ss_dssp ---EEEEEEGGGCEEEEECSSSCEEEEECCC-----------SCSSCEEEEEEEECTTS--CEEEEEEEETTSEEEEEES
T ss_pred ---eeEEEeCCCcEEEEEeccccchhhhccc-----------cccCCCceEEEcccCCC--CCCeEEEecCCCcEEEEec
Confidence 6888999999999999876543332211 02345566666552000 1123999999999999999
Q ss_pred CCcce---eecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCC
Q 017194 238 ESELN---ISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGND 314 (375)
Q Consensus 238 ~~~~~---~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~d 314 (375)
+.... ....... ...........|...|.+++|+ |++++|++++.|
T Consensus 246 ~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~v~~~~~s---p~~~~l~s~~~d 294 (368)
T 3mmy_A 246 NPPNPAKDNFTFKCH----------------------------RSNGTNTSAPQDIYAVNGIAFH---PVHGTLATVGSD 294 (368)
T ss_dssp SCSCHHHHSEEEECS----------------------------EEC----CCCEEECCEEEEEEC---TTTCCEEEEETT
T ss_pred CCCCccccceeeeee----------------------------ecccccccccccccceEEEEEe---cCCCEEEEEccC
Confidence 87421 0000000 0000011222334489999999 999999999999
Q ss_pred CeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEe
Q 017194 315 KLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYS 373 (375)
Q Consensus 315 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~ 373 (375)
|.|++||+.++ +.+..+.+|...|.+++|+| ++++|++++.|+..+.|+
T Consensus 295 g~i~iwd~~~~---------~~~~~~~~~~~~v~~~~~s~-~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 295 GRFSFWDKDAR---------TKLKTSEQLDQPISACCFNH-NGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp SCEEEEETTTT---------EEEEECCCCSSCEEEEEECT-TSSCEEEEECCCSTTCGG
T ss_pred CeEEEEECCCC---------cEEEEecCCCCCceEEEECC-CCCeEEEEeccccccccc
Confidence 99999999998 55667778999999999999 999999999887554443
No 65
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.3e-42 Score=289.37 Aligned_cols=283 Identities=13% Similarity=0.135 Sum_probs=235.5
Q ss_pred eeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCc---eeeEeeecCccEEEEEEeCCCC-eEEEEcCCCeEEE
Q 017194 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKD---VQLVTDVGNGPVTSLCFKSGNE-DIIYVSSGKEVKS 84 (375)
Q Consensus 9 ~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~---~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~d~~i~i 84 (375)
....+|.+.|++++|+|+ +++|++++.|+.|++|++.+++ ....+..|...|.+++|+|+++ +|++++.|+.|++
T Consensus 5 ~~~~~h~~~v~~~~~s~~-~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPS-KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp ECSSCCSSCEEEEEEEGG-GTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred ecccCCCCcEEEEEEcCC-CCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 345689999999999998 8999999999999999999887 3455668999999999999999 9999999999999
Q ss_pred EEC-CCCCcccccccccC--CCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcC---------ceeeeeEecCcccceeEE
Q 017194 85 FDV-HMPASWRPLESYNY--NKEEINQIVCNPKSSFLACADDGGDVKIIDIRQ---------HCLYKSLRAGHSSICSSV 152 (375)
Q Consensus 85 wd~-~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~~~v~~~ 152 (375)
||+ .+++. ..+.. |...|.+++|+| +++|++++.|+.|++||+++ ++.+..+. |...|.++
T Consensus 84 wd~~~~~~~----~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~v~~~ 156 (342)
T 1yfq_A 84 VDLIGSPSF----QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK--VKNKIFTM 156 (342)
T ss_dssp ECSSSSSSE----EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS--SCCCEEEE
T ss_pred EEeccCCce----EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe--eCCceEEE
Confidence 999 76532 45556 889999999999 99999999999999999987 77777765 88899999
Q ss_pred EEeeCCCcEEEEeecCCeEEEeeCCC-CCc-ceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCC
Q 017194 153 QFIPWKPWEVISGGLDSKLVMWDFSK-GRP-NKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDG 230 (375)
Q Consensus 153 ~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg 230 (375)
+|+|++ +++++.|+.|++||+++ +.. ....... +...+.+++|+|. +++++++++.||
T Consensus 157 ~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------------~~~~i~~i~~~~~-----~~~~l~~~~~dg 216 (342)
T 1yfq_A 157 DTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESG------------LKYQIRDVALLPK-----EQEGYACSSIDG 216 (342)
T ss_dssp EECSSE---EEEEESTTEEEEEESSCCTTCCCEEEECS------------CSSCEEEEEECSG-----GGCEEEEEETTS
T ss_pred EecCCc---EEEEeCCCeEEEEECCccccccceeeecC------------CCCceeEEEECCC-----CCCEEEEEecCC
Confidence 999875 89999999999999998 554 2333323 4678999999872 389999999999
Q ss_pred cEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecC---------CCccEEEEEEeec
Q 017194 231 VVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGG---------HTAAASCVAFSMF 301 (375)
Q Consensus 231 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~v~~~~~s~~ 301 (375)
.|++|++....... .......+.. |...|.+++|+
T Consensus 217 ~i~i~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-- 260 (342)
T 1yfq_A 217 RVAVEFFDDQGDDY----------------------------------NSSKRFAFRCHRLNLKDTNLAYPVNSIEFS-- 260 (342)
T ss_dssp EEEEEECCTTCCST----------------------------------TCTTCEEEECCCCCTTCCSSCCCEEEEEEC--
T ss_pred cEEEEEEcCCCccc----------------------------------ccccceeeecccccccccccceeEEEEEEc--
Confidence 99999998640000 0011112333 45599999999
Q ss_pred CCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhccc-ccceeeeeecCCCCCcEEEeeCCCe
Q 017194 302 GERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINL-NKKVNWLCTTPTESENLVVCDTSKV 368 (375)
Q Consensus 302 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~~dg~ 368 (375)
|++++|++++.||.|++||+.++ +.+..+.+| ...|.+++ | ++++|++++.||.
T Consensus 261 -~~~~~l~~~~~dg~i~vwd~~~~---------~~~~~~~~~h~~~v~~~~--~-~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 261 -PRHKFLYTAGSDGIISCWNLQTR---------KKIKNFAKFNEDSVVKIA--C-SDNILCLATSDDT 315 (342)
T ss_dssp -TTTCCEEEEETTSCEEEEETTTT---------EEEEECCCCSSSEEEEEE--E-CSSEEEEEEECTH
T ss_pred -CCCCEEEEecCCceEEEEcCccH---------hHhhhhhcccCCCceEec--C-CCCeEEEEecCCc
Confidence 99999999999999999999998 555667787 99999999 6 9999999999998
No 66
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.9e-41 Score=290.43 Aligned_cols=275 Identities=17% Similarity=0.242 Sum_probs=230.0
Q ss_pred eeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEee--ecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccc
Q 017194 18 ATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTD--VGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRP 95 (375)
Q Consensus 18 i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 95 (375)
++.|+|+++ ++||+|. |++|+|||..+++....+. .|...|++|+|+|+|++|++|+.|+.|++||+++++ .
T Consensus 108 ~~~l~wS~~--n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~---~ 181 (420)
T 4gga_A 108 LNLVDWSSG--NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK---R 181 (420)
T ss_dssp CBCEEECTT--SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---E
T ss_pred ceeEEECCC--CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc---E
Confidence 677999975 5787775 8999999999999877665 567889999999999999999999999999999764 4
Q ss_pred cccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCc-eeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEe
Q 017194 96 LESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQH-CLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMW 174 (375)
Q Consensus 96 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~w 174 (375)
+..+.+|...+.++.++ +..|++|+.|+.+++||.... ..+..+. +|...+..+.++|++. .+++++.|+.+++|
T Consensus 182 ~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~-~h~~~~~~~~~~~~g~-~l~s~~~D~~v~i~ 257 (420)
T 4gga_A 182 LRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLS-GHSQEVCGLRWAPDGR-HLASGGNDNLVNVW 257 (420)
T ss_dssp EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSS-EEEEEETTSCEEEE
T ss_pred EEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEec-ccccceeeeeecCCCC-eeeeeeccccceEE
Confidence 55667788899888774 679999999999999998864 4567778 9999999999999998 79999999999999
Q ss_pred eCCCCCcc----eEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEE--ecCCcEEEEeCCCcceeecccc
Q 017194 175 DFSKGRPN----KIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVA--KGDGVVDVINIESELNISRSKS 248 (375)
Q Consensus 175 d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~--~~dg~i~i~d~~~~~~~~~~~~ 248 (375)
|..+++.. .... . +...|.+++|+|. +..+++++ +.|+.|++||+.++.
T Consensus 258 ~~~~~~~~~~~~~~~~-~------------~~~~V~~~~~~p~-----~~~~la~~~gs~D~~I~iwd~~t~~------- 312 (420)
T 4gga_A 258 PSAPGEGGWVPLQTFT-Q------------HQGAVKAVAWCPW-----QSNVLATGGGTSDRHIRIWNVCSGA------- 312 (420)
T ss_dssp ESSCCSSCSCCSEEEC-C------------CSSCEEEEEECTT-----CTTEEEEEECTTTCEEEEEETTTTE-------
T ss_pred eeccccccceeeeeec-c------------cCCceeeeeeCCC-----cccEEEEEeecCCCEEEEEeCCccc-------
Confidence 99877532 2222 2 5678999999995 56666654 479999999999752
Q ss_pred cCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEec--CCCeEEEEeCCCce
Q 017194 249 TTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGG--NDKLVKVWDCSRFQ 326 (375)
Q Consensus 249 ~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~--~dg~i~iwd~~~~~ 326 (375)
+...+.. ...+.++.|+ ++++.+++++ .|+.|+|||+.++
T Consensus 313 ---------------------------------~~~~~~~-~~~v~~~~~~---~~~~~lv~~sg~~d~~I~iwd~~~~- 354 (420)
T 4gga_A 313 ---------------------------------CLSAVDA-HSQVCSILWS---PHYKELISGHGFAQNQLVIWKYPTM- 354 (420)
T ss_dssp ---------------------------------EEEEEEC-SSCEEEEEEE---TTTTEEEEEECTTTCCEEEEETTTC-
T ss_pred ---------------------------------cceeecc-ccceeeeeec---CCCCeEEEEEecCCCEEEEEECCCC-
Confidence 2334433 3568889999 8888887654 7999999999998
Q ss_pred eeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEec
Q 017194 327 GVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
+.+..+.+|.+.|++++|+| +|++|+||+.|++|+|||+
T Consensus 355 --------~~v~~l~gH~~~V~~l~~sp-dg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 355 --------AKVAELKGHTSRVLSLTMSP-DGATVASAAADETLRLWRC 393 (420)
T ss_dssp --------CEEEEECCCSSCEEEEEECT-TSSCEEEEETTTEEEEECC
T ss_pred --------cEEEEEcCCCCCEEEEEEcC-CCCEEEEEecCCeEEEEEC
Confidence 66677889999999999999 9999999999999999997
No 67
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.4e-41 Score=291.00 Aligned_cols=255 Identities=18% Similarity=0.277 Sum_probs=208.4
Q ss_pred ceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCccccc
Q 017194 17 TATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPL 96 (375)
Q Consensus 17 ~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 96 (375)
.|++++|+|+ +++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+++++....+
T Consensus 125 ~v~~v~~s~d-g~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 203 (393)
T 1erj_A 125 YIRSVCFSPD-GKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL 203 (393)
T ss_dssp BEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred eEEEEEECCC-CCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE
Confidence 4999999999 899999999999999999999999999999999999999999999999999999999999976543333
Q ss_pred ccccCCCcceeEEEEcC-CCCeEEEEeCCCcEEEEeCcCceeeeeE-------ecCcccceeEEEEeeCCCcEEEEeecC
Q 017194 97 ESYNYNKEEINQIVCNP-KSSFLACADDGGDVKIIDIRQHCLYKSL-------RAGHSSICSSVQFIPWKPWEVISGGLD 168 (375)
Q Consensus 97 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~~l~~~~~d 168 (375)
. +...+.+++|+| ++++|++|+.|+.|++||+++++.+..+ . +|...|.+++|+|+++ +|++++.|
T Consensus 204 ~----~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~-~h~~~v~~v~~~~~g~-~l~s~s~d 277 (393)
T 1erj_A 204 S----IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGT-GHKDSVYSVVFTRDGQ-SVVSGSLD 277 (393)
T ss_dssp E----CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------C-CCSSCEEEEEECTTSS-EEEEEETT
T ss_pred E----cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCC-CCCCCEEEEEECCCCC-EEEEEeCC
Confidence 2 356899999999 8999999999999999999998877766 4 7899999999999998 79999999
Q ss_pred CeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccc
Q 017194 169 SKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKS 248 (375)
Q Consensus 169 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 248 (375)
+.|++||+++............ .........|...|.+++++| ++.+|++|+.|+.|++||+.++
T Consensus 278 ~~v~~wd~~~~~~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~------~~~~l~sgs~D~~v~iwd~~~~-------- 342 (393)
T 1erj_A 278 RSVKLWNLQNANNKSDSKTPNS-GTCEVTYIGHKDFVLSVATTQ------NDEYILSGSKDRGVLFWDKKSG-------- 342 (393)
T ss_dssp SEEEEEEC----------------CEEEEEECCSSCEEEEEECG------GGCEEEEEETTSEEEEEETTTC--------
T ss_pred CEEEEEECCCCCCcccccCCCC-CcceEEEecccCcEEEEEECC------CCCEEEEEeCCCeEEEEECCCC--------
Confidence 9999999986543211100000 000000011567899999999 7999999999999999999874
Q ss_pred cCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEee---cCCCCcEEEEecCCCeEEEEeCCCc
Q 017194 249 TTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSM---FGERGKYLISGGNDKLVKVWDCSRF 325 (375)
Q Consensus 249 ~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~~~~l~s~~~dg~i~iwd~~~~ 325 (375)
+.+..+.+|...|.+++|++ ++|++++|++|+.||.|++|++...
T Consensus 343 --------------------------------~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 343 --------------------------------NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp --------------------------------CEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred --------------------------------eEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 33457789999999999984 2347899999999999999998654
No 68
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.2e-42 Score=300.82 Aligned_cols=304 Identities=10% Similarity=0.146 Sum_probs=230.3
Q ss_pred CCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCc-----------eeeEeeecC------------ccEEEEEEeCCC
Q 017194 14 HKATATCCIASRDRPGFVASSGEDGCICWFDLRSKD-----------VQLVTDVGN------------GPVTSLCFKSGN 70 (375)
Q Consensus 14 h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~-----------~~~~~~~~~------------~~v~~l~~~~~~ 70 (375)
|.+.|++++|+|+ +++||+|+.||.|+||++.+++ ....+.+|. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~-g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 27 EADIISTVEFNHS-GELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp GGGSEEEEEECSS-SSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred ccCcEEEEEECCC-CCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 5789999999998 8999999999999999999877 477888898 889999999998
Q ss_pred --CeEEEEcCCCeEEEEECCCCCccc------------------------------------cccc-ccCCCcceeEEEE
Q 017194 71 --EDIIYVSSGKEVKSFDVHMPASWR------------------------------------PLES-YNYNKEEINQIVC 111 (375)
Q Consensus 71 --~~l~~~~~d~~i~iwd~~~~~~~~------------------------------------~~~~-~~~~~~~v~~~~~ 111 (375)
..|++++.|+.|++||+.++.... .... ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 789999999999999987532210 0011 3568999999999
Q ss_pred cCCCCeEEEEeCCCcEEEEeCcC-ceeeee-------EecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCc--
Q 017194 112 NPKSSFLACADDGGDVKIIDIRQ-HCLYKS-------LRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRP-- 181 (375)
Q Consensus 112 ~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~-------~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-- 181 (375)
+|++++|++| .|+.|++||+++ ++.+.. +. +|...|.+++|+|++..+|++++.||.|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANME-ELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGG-GCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeeccccccc-ccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 9999999998 799999999984 444442 44 78999999999999833899999999999999999886
Q ss_pred --ceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCC-cceeecccccCCCCCCcee
Q 017194 182 --NKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIES-ELNISRSKSTTKPLKGSQS 258 (375)
Q Consensus 182 --~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~ 258 (375)
...+..... .........+...|.+++|+| ++++|++++. +.|++||+++ +.
T Consensus 264 ~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~------~g~~l~~~~~-~~v~iwd~~~~~~----------------- 318 (447)
T 3dw8_B 264 RHSKLFEEPED-PSNRSFFSEIISSISDVKFSH------SGRYMMTRDY-LSVKVWDLNMENR----------------- 318 (447)
T ss_dssp TTCEEECCC------CCHHHHHTTCEEEEEECT------TSSEEEEEES-SEEEEEETTCCSS-----------------
T ss_pred ceeeEeccCCC-ccccccccccCceEEEEEECC------CCCEEEEeeC-CeEEEEeCCCCcc-----------------
Confidence 566653200 000000000113899999999 8999999999 9999999986 32
Q ss_pred ecccccceeeeeeeecCCcceeEeeeeecCCCc---------------cEEEEEEeecCCCCcEEEEecCCCeEEEEeCC
Q 017194 259 TSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTA---------------AASCVAFSMFGERGKYLISGGNDKLVKVWDCS 323 (375)
Q Consensus 259 ~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~ 323 (375)
++..+.+|.. .+..++|+ |++++|++|+.||.|++||+.
T Consensus 319 -----------------------~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s---~~~~~l~s~s~dg~v~iwd~~ 372 (447)
T 3dw8_B 319 -----------------------PVETYQVHEYLRSKLCSLYENDCIFDKFECCWN---GSDSVVMTGSYNNFFRMFDRN 372 (447)
T ss_dssp -----------------------CSCCEESCGGGTTTHHHHHHTSGGGCCCCEEEC---TTSSEEEEECSTTEEEEEETT
T ss_pred -----------------------ccceeeccccccccccccccccccccceEEEEC---CCCCEEEEeccCCEEEEEEcC
Confidence 1223333322 13458999 999999999999999999999
Q ss_pred Cceeeeecchh-----------------------hhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEe
Q 017194 324 RFQGVQTSINN-----------------------DLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYS 373 (375)
Q Consensus 324 ~~~~~~~~~~~-----------------------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~ 373 (375)
+++........ ........+...|..++|+| ++++||+++.++ +++|.
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p-~~~~la~~~~~~-~~~~~ 443 (447)
T 3dw8_B 373 TKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHP-KENIIAVATTNN-LYIFQ 443 (447)
T ss_dssp TCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECS-SSSEEEEECSSC-EEEEE
T ss_pred CCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECC-CCCEEEEEecce-eeeec
Confidence 88654211000 00111234567899999999 999999998876 77775
No 69
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.5e-42 Score=288.19 Aligned_cols=263 Identities=15% Similarity=0.113 Sum_probs=205.2
Q ss_pred EeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcC--CCCeEEEEeCCCcEEEE
Q 017194 53 VTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNP--KSSFLACADDGGDVKII 130 (375)
Q Consensus 53 ~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iw 130 (375)
.+.+|...|++++|+|++++|++++.|++|++||+.++.. ..+..+.+|...|.+++|++ ++++|++++.|++|++|
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~-~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ-ILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE-EEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc-EEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 4568999999999999999999999999999999986532 34566778999999999986 48899999999999999
Q ss_pred eCcCc--eeeeeEecCcccceeEEEEeeC--CCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCcee
Q 017194 131 DIRQH--CLYKSLRAGHSSICSSVQFIPW--KPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVH 206 (375)
Q Consensus 131 d~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 206 (375)
|++++ +....+. +|...|++++|+|+ +. +|++++.|+.|++||++.+........ ...|...+.
T Consensus 87 d~~~~~~~~~~~~~-~h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~~~~~~~~~~----------~~~h~~~v~ 154 (316)
T 3bg1_A 87 REENGTWEKSHEHA-GHDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTGEGQWEVKKI----------NNAHTIGCN 154 (316)
T ss_dssp CCSSSCCCEEEEEC-CCSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECSSSCEEECCB----------TTSSSSCBC
T ss_pred ECCCCcceEEEEcc-CCCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCCCCCcceeee----------eccccCCcc
Confidence 99876 3566777 89999999999998 55 799999999999999987643211110 011456788
Q ss_pred EEeecCCccc-----------cCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecC
Q 017194 207 AIAIPDADML-----------DKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQS 275 (375)
Q Consensus 207 ~~~~~~~~~~-----------~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~ 275 (375)
+++|+|.... ...+++|++|+.|+.|++||++..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~----------------------------------- 199 (316)
T 3bg1_A 155 AVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEED----------------------------------- 199 (316)
T ss_dssp CCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTT-----------------------------------
T ss_pred eEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCC-----------------------------------
Confidence 8999883100 011478999999999999999742
Q ss_pred CcceeEeeeeecCCCccEEEEEEeecCCCC----cEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeee
Q 017194 276 GGKRLHLDYSVGGHTAAASCVAFSMFGERG----KYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLC 351 (375)
Q Consensus 276 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 351 (375)
........+.+|...|.+++|+ |++ ++|++++.|++|++|++.+..... .....+..|...|.+++
T Consensus 200 --~~~~~~~~l~~h~~~V~~v~~s---p~~~~~~~~las~s~D~~v~iw~~~~~~~~~-----~~~~~~~~~~~~v~~v~ 269 (316)
T 3bg1_A 200 --GQWKEEQKLEAHSDWVRDVAWA---PSIGLPTSTIASCSQDGRVFIWTCDDASSNT-----WSPKLLHKFNDVVWHVS 269 (316)
T ss_dssp --SCEEEEECCBCCSSCEEEEECC---CCSSCSCCEEEEEETTCEEEEEECSSTTCCC-----CBCCEEEECSSCEEEEE
T ss_pred --CccceeeecccCCCceEEEEec---CCCCCCCceEEEEcCCCeEEEEEccCccccc-----hhhhhhhcCCCcEEEEE
Confidence 1123455788999999999999 775 899999999999999998631000 11223456889999999
Q ss_pred ecCCCCCcEEEeeCCCeEEEEec
Q 017194 352 TTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 352 ~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
|+| ++++|++++.|+.|++|+.
T Consensus 270 ~sp-~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 270 WSI-TANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp ECT-TTCCEEEEESSSCEEEEEE
T ss_pred EcC-CCCEEEEEcCCCeEEEEEE
Confidence 999 9999999999999999985
No 70
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.9e-42 Score=292.56 Aligned_cols=268 Identities=19% Similarity=0.236 Sum_probs=223.2
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCc-------eeeEeeecCccEEEEEEeCCC-CeEEE
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKD-------VQLVTDVGNGPVTSLCFKSGN-EDIIY 75 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~-------~~~~~~~~~~~v~~l~~~~~~-~~l~~ 75 (375)
+++....+++|...|.+++|+|+ +++|++|+.|+.+++|++.+.. ....+.+|...|.++.|.|++ ..|++
T Consensus 97 ~~~~~~~~~~h~~~v~~~~~s~~-g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s 175 (380)
T 3iz6_a 97 TSQKTHAIKLHCPWVMECAFAPN-GQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLIT 175 (380)
T ss_dssp TTEEEEEEECCCTTCCCCEECTT-SSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEE
T ss_pred CCccceEEecCCCCEEEEEECCC-CCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEE
Confidence 45567788999999999999999 8999999999999999987532 345678899999999999974 56999
Q ss_pred EcCCCeEEEEECCCCCcccccc--cccCCCcceeEEEEcC-CCCeEEEEeCCCcEEEEeCc-CceeeeeEecCcccceeE
Q 017194 76 VSSGKEVKSFDVHMPASWRPLE--SYNYNKEEINQIVCNP-KSSFLACADDGGDVKIIDIR-QHCLYKSLRAGHSSICSS 151 (375)
Q Consensus 76 ~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~v~~ 151 (375)
++.|++|++||+.+++....+. ...+|...|.+++|++ ++++|++|+.|+.|++||++ .++.+..+. +|...|++
T Consensus 176 ~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~-~h~~~v~~ 254 (380)
T 3iz6_a 176 GSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH-GHEGDINS 254 (380)
T ss_dssp ECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC-CCSSCCCE
T ss_pred ECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC-CcCCCeEE
Confidence 9999999999999876554332 2256889999999987 78999999999999999998 457788888 99999999
Q ss_pred EEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCc
Q 017194 152 VQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGV 231 (375)
Q Consensus 152 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~ 231 (375)
++|+|++. +|++++.|++|++||+++++.+..+...... ...+...+.+++|+| ++++|++|+.||.
T Consensus 255 v~~~p~~~-~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~s~------~g~~l~~g~~dg~ 321 (380)
T 3iz6_a 255 VKFFPDGQ-RFGTGSDDGTCRLFDMRTGHQLQVYNREPDR------NDNELPIVTSVAFSI------SGRLLFAGYSNGD 321 (380)
T ss_dssp EEECTTSS-EEEEECSSSCEEEEETTTTEEEEEECCCCSS------SCCSSCSCSEEEECS------SSSEEEEECTTSC
T ss_pred EEEecCCC-eEEEEcCCCeEEEEECCCCcEEEEecccccc------cccccCceEEEEECC------CCCEEEEEECCCC
Confidence 99999998 7999999999999999999888777533100 001224589999999 8999999999999
Q ss_pred EEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEe
Q 017194 232 VDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISG 311 (375)
Q Consensus 232 i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~ 311 (375)
|++||+.+++... .......+|...|.+++|+ |+|++|++|
T Consensus 322 i~vwd~~~~~~~~------------------------------------~~~~~~~~h~~~v~~l~~s---~dg~~l~sg 362 (380)
T 3iz6_a 322 CYVWDTLLAEMVL------------------------------------NLGTLQNSHEGRISCLGLS---SDGSALCTG 362 (380)
T ss_dssp EEEEETTTCCEEE------------------------------------EECCSCSSCCCCCCEEEEC---SSSSEEEEE
T ss_pred EEEEECCCCceEE------------------------------------EEecccCCCCCceEEEEEC---CCCCEEEEe
Confidence 9999998643221 1111236899999999999 999999999
Q ss_pred cCCCeEEEEeCCCc
Q 017194 312 GNDKLVKVWDCSRF 325 (375)
Q Consensus 312 ~~dg~i~iwd~~~~ 325 (375)
+.|+.|++|++...
T Consensus 363 s~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 363 SWDKNLKIWAFSGH 376 (380)
T ss_dssp CTTSCEEEEECCSS
T ss_pred eCCCCEEEEecCCC
Confidence 99999999999875
No 71
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.2e-41 Score=293.05 Aligned_cols=281 Identities=18% Similarity=0.250 Sum_probs=236.2
Q ss_pred ecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCC
Q 017194 12 RGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPA 91 (375)
Q Consensus 12 ~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~ 91 (375)
.+|...|.|+.+ + +++|++|+.||.|++||+.+++....+.+|...|.+++| ++++|++|+.||.|++||+.+++
T Consensus 130 ~~~~~~v~~~~~--d-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 130 SETSKGVYCLQY--D-DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp CSSCCCEEEEEC--C-SSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred cCCCCcEEEEEE--C-CCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc
Confidence 456778998887 4 789999999999999999999999999999999999999 68899999999999999999765
Q ss_pred cccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceee---eeEecCcccceeEEEEeeCCCcEEEEeecC
Q 017194 92 SWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLY---KSLRAGHSSICSSVQFIPWKPWEVISGGLD 168 (375)
Q Consensus 92 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 168 (375)
. +..+.+|...|.+++|++ ..+++|+.||.|++||+++++.. ..+. +|...|.+++| +++ .+++++.|
T Consensus 205 ~---~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~-~~~~~v~~~~~--~~~-~l~s~~~d 275 (435)
T 1p22_A 205 M---LNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLV-GHRAAVNVVDF--DDK-YIVSASGD 275 (435)
T ss_dssp E---EEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEEC-CCSSCEEEEEE--ETT-EEEEEETT
T ss_pred E---EEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEec-CCCCcEEEEEe--CCC-EEEEEeCC
Confidence 4 455567889999999974 59999999999999999987655 5666 89999999999 455 79999999
Q ss_pred CeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccc
Q 017194 169 SKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKS 248 (375)
Q Consensus 169 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 248 (375)
|.|++||+++++.+..+.. |...+.+++++ ++++++|+.||.|++||++++
T Consensus 276 g~i~vwd~~~~~~~~~~~~-------------~~~~v~~~~~~--------~~~l~~g~~dg~i~iwd~~~~-------- 326 (435)
T 1p22_A 276 RTIKVWNTSTCEFVRTLNG-------------HKRGIACLQYR--------DRLVVSGSSDNTIRLWDIECG-------- 326 (435)
T ss_dssp SEEEEEETTTCCEEEEEEC-------------CSSCEEEEEEE--------TTEEEEEETTSCEEEEETTTC--------
T ss_pred CeEEEEECCcCcEEEEEcC-------------CCCcEEEEEeC--------CCEEEEEeCCCeEEEEECCCC--------
Confidence 9999999999998888873 46788999883 789999999999999999974
Q ss_pred cCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceee
Q 017194 249 TTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGV 328 (375)
Q Consensus 249 ~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 328 (375)
+++..+.+|...|.+++| ++++|++|+.||.|++||+.++...
T Consensus 327 --------------------------------~~~~~~~~h~~~v~~~~~-----~~~~l~sg~~dg~i~vwd~~~~~~~ 369 (435)
T 1p22_A 327 --------------------------------ACLRVLEGHEELVRCIRF-----DNKRIVSGAYDGKIKVWDLVAALDP 369 (435)
T ss_dssp --------------------------------CEEEEECCCSSCEEEEEC-----CSSEEEEEETTSCEEEEEHHHHTST
T ss_pred --------------------------------CEEEEEeCCcCcEEEEEe-----cCCEEEEEeCCCcEEEEECCCCCCc
Confidence 344577889999999987 4679999999999999999775311
Q ss_pred eecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 329 QTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
........+..+.+|.+.|.+++| ++++|++++.||.|++||+.
T Consensus 370 ~~~~~~~~~~~~~~h~~~v~~l~~---~~~~l~s~s~Dg~i~iwd~~ 413 (435)
T 1p22_A 370 RAPAGTLCLRTLVEHSGRVFRLQF---DEFQIVSSSHDDTILIWDFL 413 (435)
T ss_dssp TSCTTTTEEEEECCCSSCCCCEEE---CSSCEEECCSSSEEEEEC--
T ss_pred cccccchheeeccCCCCCeEEEEe---CCCEEEEEeCCCEEEEEECC
Confidence 000000145567789999999999 66799999999999999974
No 72
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.2e-40 Score=276.81 Aligned_cols=256 Identities=21% Similarity=0.274 Sum_probs=220.0
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEE
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVK 83 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~ 83 (375)
+++....+.+|...|.+++|+|+ +++|++|+.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 54 ~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~ 132 (312)
T 4ery_A 54 DGKFEKTISGHKLGISDVAWSSD-SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 132 (312)
T ss_dssp TCCEEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred CcccchhhccCCCceEEEEEcCC-CCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEE
Confidence 34566788899999999999998 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEE
Q 017194 84 SFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVI 163 (375)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 163 (375)
+||+++++. +..+..|..+|.+++|+|++++|++++.||.|++||+++++.+..+...+...+..++|+|+++ +|+
T Consensus 133 iwd~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~ 208 (312)
T 4ery_A 133 IWDVKTGKC---LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-YIL 208 (312)
T ss_dssp EEETTTCCE---EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSS-EEE
T ss_pred EEECCCCEE---EEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCC-EEE
Confidence 999987643 4455667899999999999999999999999999999998887777535677899999999998 799
Q ss_pred EeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCccee
Q 017194 164 SGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNI 243 (375)
Q Consensus 164 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 243 (375)
+++.|+.|++||+++++.+..+.... .........+++. ++.+|++|+.||.|++||+.++
T Consensus 209 ~~~~d~~i~iwd~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~-----~~~~l~sg~~dg~i~vwd~~~~--- 269 (312)
T 4ery_A 209 AATLDNTLKLWDYSKGKCLKTYTGHK-----------NEKYCIFANFSVT-----GGKWIVSGSEDNLVYIWNLQTK--- 269 (312)
T ss_dssp EEETTTEEEEEETTTTEEEEEECSSC-----------CSSSCCCEEEECS-----SSCEEEECCTTSCEEEEETTTC---
T ss_pred EEcCCCeEEEEECCCCcEEEEEEecC-----------CceEEEEEEEEeC-----CCcEEEEECCCCEEEEEECCCc---
Confidence 99999999999999998877775331 0111122233321 6899999999999999999874
Q ss_pred ecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEec--CCCeEEEEe
Q 017194 244 SRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGG--NDKLVKVWD 321 (375)
Q Consensus 244 ~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~--~dg~i~iwd 321 (375)
+.+..+.+|...|.+++|+ |++++|++++ .|+.|++|+
T Consensus 270 -------------------------------------~~~~~~~~h~~~v~~~~~~---p~~~~l~s~~~~~d~~i~~W~ 309 (312)
T 4ery_A 270 -------------------------------------EIVQKLQGHTDVVISTACH---PTENIIASAALENDKTIKLWK 309 (312)
T ss_dssp -------------------------------------CEEEEECCCSSCEEEEEEC---SSSSEEEEEECTTTCCEEEEE
T ss_pred -------------------------------------hhhhhhhccCCcEEEEeec---CcCCceEEEEccCCccEEEec
Confidence 3455788999999999999 9999999886 699999998
Q ss_pred CC
Q 017194 322 CS 323 (375)
Q Consensus 322 ~~ 323 (375)
.+
T Consensus 310 ~d 311 (312)
T 4ery_A 310 SD 311 (312)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 73
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=8.9e-41 Score=292.98 Aligned_cols=286 Identities=14% Similarity=0.166 Sum_probs=240.6
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEe--CCCCeEEEEcCCCe
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFK--SGNEDIIYVSSGKE 81 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~--~~~~~l~~~~~d~~ 81 (375)
+++.+..+.+|.+.|++++|+|+ + +|++|+.||+|++||+++++.+..+.+|...|.+++|+ ++++++++++.|+.
T Consensus 151 ~~~~~~~~~~h~~~V~~l~~~~~-~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~ 228 (464)
T 3v7d_B 151 NKKFLLQLSGHDGGVWALKYAHG-G-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNT 228 (464)
T ss_dssp TTEEEEEECCCSSCEEEEEECST-T-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSC
T ss_pred CCcEEEEEeCCCcCEEEEEEcCC-C-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCc
Confidence 45667888999999999999998 4 99999999999999999999999999999999999998 57789999999999
Q ss_pred EEEEECCCCCcccc--------------------cccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeE
Q 017194 82 VKSFDVHMPASWRP--------------------LESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSL 141 (375)
Q Consensus 82 i~iwd~~~~~~~~~--------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 141 (375)
|++||+.++..... +..+.+|...+.++ +++++++++++.|+.|++||+++++.+..+
T Consensus 229 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~ 306 (464)
T 3v7d_B 229 LHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYIL 306 (464)
T ss_dssp EEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 99999987543221 34456677778776 577889999999999999999999999999
Q ss_pred ecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCC
Q 017194 142 RAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNK 221 (375)
Q Consensus 142 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 221 (375)
. +|...|.+++|+|+++ .+++++.||.|++||+++++++..+.. |...|.+++++ ++
T Consensus 307 ~-~~~~~v~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~-------------h~~~v~~~~~~--------~~ 363 (464)
T 3v7d_B 307 S-GHTDRIYSTIYDHERK-RCISASMDTTIRIWDLENGELMYTLQG-------------HTALVGLLRLS--------DK 363 (464)
T ss_dssp C-CCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTTEEEEEECC-------------CSSCEEEEEEC--------SS
T ss_pred c-CCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCcEEEEEeC-------------CCCcEEEEEEc--------CC
Confidence 9 9999999999999998 799999999999999999998888763 46789999994 67
Q ss_pred EEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeec
Q 017194 222 ICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMF 301 (375)
Q Consensus 222 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 301 (375)
++++++.||.|++||+.+.... ... .|...+..++|+
T Consensus 364 ~l~s~s~dg~v~vwd~~~~~~~----------------------------------------~~~-~~~~~~~~~~~~-- 400 (464)
T 3v7d_B 364 FLVSAAADGSIRGWDANDYSRK----------------------------------------FSY-HHTNLSAITTFY-- 400 (464)
T ss_dssp EEEEEETTSEEEEEETTTCCEE----------------------------------------EEE-ECTTCCCEEEEE--
T ss_pred EEEEEeCCCcEEEEECCCCcee----------------------------------------eee-cCCCCccEEEEE--
Confidence 9999999999999999974211 111 245567778899
Q ss_pred CCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhh-hhcccccceeeeeecCCCCCcEEEeeCCCeEEEE
Q 017194 302 GERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLI-KNINLNKKVNWLCTTPTESENLVVCDTSKVVKVY 372 (375)
Q Consensus 302 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw 372 (375)
+++++|++|+ ||.|++||+.+++ ++. ....|...|.+++|+. ..++++++.||.+.+|
T Consensus 401 -~~~~~l~~~~-dg~i~iwd~~~g~---------~~~~~~~~~~~~v~~v~~~~--~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 401 -VSDNILVSGS-ENQFNIYNLRSGK---------LVHANILKDADQIWSVNFKG--KTLVAAVEKDGQSFLE 459 (464)
T ss_dssp -ECSSEEEEEE-TTEEEEEETTTCC---------EEESCTTTTCSEEEEEEEET--TEEEEEEEETTEEEEE
T ss_pred -eCCCEEEEec-CCeEEEEECCCCc---------EEehhhccCCCcEEEEEecC--CEEEEEEEeCCeEEEE
Confidence 8999999998 8999999999984 443 3567899999999963 3456666677766554
No 74
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=277.35 Aligned_cols=280 Identities=16% Similarity=0.205 Sum_probs=226.0
Q ss_pred eeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEee--ecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccc
Q 017194 18 ATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTD--VGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRP 95 (375)
Q Consensus 18 i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 95 (375)
.++|+||++ + +||+| .|++|+|||+++++.++.+. .|...|.+++|+|++++|++|+.|++|++||+++++.
T Consensus 28 ~~~l~WS~~-~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~--- 101 (318)
T 4ggc_A 28 LNLVDWSSG-N-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR--- 101 (318)
T ss_dssp CBCEEECTT-S-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE---
T ss_pred ceEEEECCC-C-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCcee---
Confidence 578999987 3 77776 48999999999999887765 5778899999999999999999999999999997644
Q ss_pred cccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCc-eeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEe
Q 017194 96 LESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQH-CLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMW 174 (375)
Q Consensus 96 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~w 174 (375)
+..+.+|...+.++.+ ++..+++++.++.+++|+.... ..+..+. +|...+..+.+.++++ ++++++.|+.|++|
T Consensus 102 ~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iw 177 (318)
T 4ggc_A 102 LRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLS-GHSQEVCGLRWAPDGR-HLASGGNDNLVNVW 177 (318)
T ss_dssp EEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSS-EEEEEETTSCEEEE
T ss_pred EEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEc-CccCceEEEEEcCCCC-EEEEEecCcceeEE
Confidence 4455667777776554 5679999999999999998865 4556677 8999999999999998 79999999999999
Q ss_pred eCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEE--EEEecCCcEEEEeCCCcceeecccccCCC
Q 017194 175 DFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKIC--VVAKGDGVVDVINIESELNISRSKSTTKP 252 (375)
Q Consensus 175 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l--~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 252 (375)
|+++++........ ...+...+.+++++|. +...+ ++++.++.|++||.......
T Consensus 178 d~~~~~~~~~~~~~---------~~~~~~~v~~~~~~~~-----~~~~~~~~~~~~~~~i~lwd~~~~~~~--------- 234 (318)
T 4ggc_A 178 PSAPGEGGWVPLQT---------FTQHQGAVKAVAWCPW-----QSNVLATGGGTSDRHIRIWNVCSGACL--------- 234 (318)
T ss_dssp ESSCBTTBSCCSEE---------ECCCCSCEEEEEECTT-----STTEEEEEECTTTCEEEEEETTTCCEE---------
T ss_pred ECCCCcccccceee---------ecccCCceEEEEecCC-----CCcEEEEEecCCCCEEEEEeccccccc---------
Confidence 99987643221100 0014578899999984 34443 45667899999999864211
Q ss_pred CCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEe--cCCCeEEEEeCCCceeeee
Q 017194 253 LKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISG--GNDKLVKVWDCSRFQGVQT 330 (375)
Q Consensus 253 ~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~--~~dg~i~iwd~~~~~~~~~ 330 (375)
....+...+..+.|+ +++..++++ +.|+.|++||+.++
T Consensus 235 --------------------------------~~~~~~~~v~~~~~~---~~~~~~~~~sg~~d~~i~iwd~~~~----- 274 (318)
T 4ggc_A 235 --------------------------------SAVDAHSQVCSILWS---PHYKELISGHGFAQNQLVIWKYPTM----- 274 (318)
T ss_dssp --------------------------------EEEECSSCEEEEEEE---TTTTEEEEEECTTTCCEEEEETTTC-----
T ss_pred --------------------------------ccccceeeeeeeeec---ccccceEEEEEcCCCEEEEEECCCC-----
Confidence 223456778999999 788777654 47999999999998
Q ss_pred cchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 331 SINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 331 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
+.+..+.+|.+.|++++|+| ++++|+||+.||+|+|||+.
T Consensus 275 ----~~~~~l~gH~~~V~~l~~sp-dg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 275 ----AKVAELKGHTSRVLSLTMSP-DGATVASAAADETLRLWRCF 314 (318)
T ss_dssp ----CEEEEECCCSSCEEEEEECT-TSSCEEEEETTTEEEEECCS
T ss_pred ----cEEEEEcCCCCCEEEEEEcC-CCCEEEEEecCCeEEEEECC
Confidence 66677889999999999999 99999999999999999973
No 75
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=9.8e-41 Score=312.45 Aligned_cols=342 Identities=12% Similarity=0.107 Sum_probs=263.4
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEE
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVK 83 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~ 83 (375)
+++.+..+.+|.++|++++|+|+ +++|++++.||.|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.|+
T Consensus 44 ~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 122 (814)
T 3mkq_A 44 TQVEVRSIQVTETPVRAGKFIAR-KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVK 122 (814)
T ss_dssp TTEEEEEEECCSSCEEEEEEEGG-GTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred CCceEEEEecCCCcEEEEEEeCC-CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEE
Confidence 45677889999999999999999 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCCcccccccccCCCcceeEEEEcC-CCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEee--CCCc
Q 017194 84 SFDVHMPASWRPLESYNYNKEEINQIVCNP-KSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIP--WKPW 160 (375)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~ 160 (375)
+||+.++. .....+.+|...|.+++|+| +++.|++++.||.|++||+.+++....+...+...+.+++|+| +++
T Consensus 123 vw~~~~~~--~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~- 199 (814)
T 3mkq_A 123 LWNWENNW--ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP- 199 (814)
T ss_dssp EEEGGGTS--EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCC-
T ss_pred EEECCCCc--eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCC-
Confidence 99998642 34455667889999999999 8889999999999999999988887777734448999999999 887
Q ss_pred EEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCc
Q 017194 161 EVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESE 240 (375)
Q Consensus 161 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 240 (375)
++++++.||.|++||+++++.+..+.. |...+.+++|+| +++++++++.||.|++||+.++
T Consensus 200 ~l~~~~~dg~i~~~d~~~~~~~~~~~~-------------~~~~v~~~~~~~------~~~~l~~~~~dg~v~vwd~~~~ 260 (814)
T 3mkq_A 200 YMITASDDLTIKIWDYQTKSCVATLEG-------------HMSNVSFAVFHP------TLPIIISGSEDGTLKIWNSSTY 260 (814)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEEC-------------CSSCEEEEEECS------SSSEEEEEETTSCEEEEETTTC
T ss_pred EEEEEeCCCEEEEEECCCCcEEEEEcC-------------CCCCEEEEEEcC------CCCEEEEEeCCCeEEEEECCCC
Confidence 799999999999999999988887763 467899999999 7999999999999999999987
Q ss_pred ceeecccccCCCCCCceeecccccce-eeee------eeecCCc----------ce------------------------
Q 017194 241 LNISRSKSTTKPLKGSQSTSKVNIRD-AEME------ILDQSGG----------KR------------------------ 279 (375)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~s~~g~~~-~~~~------~~~~~~~----------~~------------------------ 279 (375)
......... ...+.+++++|+|..+ ...+ .+..... ..
T Consensus 261 ~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (814)
T 3mkq_A 261 KVEKTLNVG-LERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEV 339 (814)
T ss_dssp SEEEEECCS-SSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCC
T ss_pred cEEEEeecC-CCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeeccccccc
Confidence 665544433 3567778888888753 2211 1111000 00
Q ss_pred ------eEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeee---------e-----------cch
Q 017194 280 ------LHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQ---------T-----------SIN 333 (375)
Q Consensus 280 ------~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~---------~-----------~~~ 333 (375)
......+..+...+.+++|+ |+|+++++++ |+.+.+|++....... . ...
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~s---pdg~~la~~~-~~~~~i~~~~~~~~~~~~~i~~~~~spdg~~la~~~~~g~ 415 (814)
T 3mkq_A 340 EQDEPLSLQTKELGSVDVFPQSLAHS---PNGRFVTVVG-DGEYVIYTALAWRNKAFGKCQDFVWGPDSNSYALIDETGQ 415 (814)
T ss_dssp CSSSCBCCCCEEECCCSSCCSEEEEC---TTSSEEEEEE-TTEEEEEETTTTEEEEEEECSEEEECTTSSCEEEECTTCC
T ss_pred ccCccceeeeecCCCCccCCceeEEC---CCCCEEEEec-CCEEEEEECccccccCCCceEEEEEeCCCCeEEEEeCCCc
Confidence 00011223455678999999 9999999998 8999999987643210 0 000
Q ss_pred hhhhhhhcccccceeeeeecCCCC---CcEEEeeCCCeEEEEec
Q 017194 334 NDLLIKNINLNKKVNWLCTTPTES---ENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 334 ~~~~~~~~~~~~~v~~~~~~~~~~---~~l~s~~~dg~v~iw~~ 374 (375)
-.+...+.+|...+..++|+| ++ .+|++++.|+.|++||+
T Consensus 416 v~l~~~~~~~~~~v~~~~~s~-dg~~~~~l~~~~~d~~v~~~d~ 458 (814)
T 3mkq_A 416 IKYYKNFKEVTSWSVPMHSAI-DRLFSGALLGVKSDGFVYFFDW 458 (814)
T ss_dssp EEEEETTEECTTCCCCCSSCC-CEEECSSSEEEEETTEEEEECT
T ss_pred EEEEECCCCccceEEcCCcCc-cceecceEEEEecCCEEEEEEC
Confidence 011123334555566666666 55 45666666666666665
No 76
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-40 Score=284.02 Aligned_cols=263 Identities=14% Similarity=0.184 Sum_probs=218.6
Q ss_pred CCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecc--cCceeeEeeecCccEEEEEEeCC--CCeEEEEcCCC
Q 017194 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLR--SKDVQLVTDVGNGPVTSLCFKSG--NEDIIYVSSGK 80 (375)
Q Consensus 5 ~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~--~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~d~ 80 (375)
++.+..+++|.++|++++|+|+ +++||+|+.||.|+|||+. +++.+..+.+|...|.+++|+++ +++|++++.|+
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYY-GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp ----CCEEECCCCEEEEEECSS-SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred CCccEEecCCcccEEEEEEcCC-CCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence 3567889999999999999999 8999999999999999998 66677888899999999999977 89999999999
Q ss_pred eEEEEECCCCCcccccccccCCCcceeEEEEcCC--CCeEEEEeCCCcEEEEeCcCce--eeeeEecCcccceeEEEEee
Q 017194 81 EVKSFDVHMPASWRPLESYNYNKEEINQIVCNPK--SSFLACADDGGDVKIIDIRQHC--LYKSLRAGHSSICSSVQFIP 156 (375)
Q Consensus 81 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~ 156 (375)
.|++||+.+++ ...+..+..|...|.+++|+|+ +++|++++.|+.|++||++++. ....+. .|...|.+++|+|
T Consensus 80 ~v~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~~v~~~~~~~ 157 (379)
T 3jrp_A 80 KVLIWKEENGR-WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID-AHAIGVNSASWAP 157 (379)
T ss_dssp CEEEEEEETTE-EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEE-CCTTCEEEEEECC
T ss_pred EEEEEEcCCCc-eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEec-CCCCceEEEEEcC
Confidence 99999998754 2355566678899999999999 9999999999999999998773 344566 8999999999999
Q ss_pred -------------CCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCC---C
Q 017194 157 -------------WKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKT---N 220 (375)
Q Consensus 157 -------------~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~ 220 (375)
++. ++++++.|+.|++||+++++........ ...|...|.+++|+| + +
T Consensus 158 ~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~---------~~~h~~~v~~~~~sp------~~~~~ 221 (379)
T 3jrp_A 158 ATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLEST---------LEGHSDWVRDVAWSP------TVLLR 221 (379)
T ss_dssp CC----------CTTC-EEEEEETTSCEEEEEEETTTTEEEEEEE---------ECCCSSCEEEEEECC------CCSSS
T ss_pred ccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcceeeEEE---------EecccCcEeEEEECC------CCCCC
Confidence 566 8999999999999999877654322211 001568899999999 7 8
Q ss_pred CEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEee
Q 017194 221 KICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSM 300 (375)
Q Consensus 221 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 300 (375)
++|++++.||.|++||++++... ..........|...|.+++|+
T Consensus 222 ~~l~s~~~dg~i~iwd~~~~~~~-----------------------------------~~~~~~~~~~~~~~v~~~~~s- 265 (379)
T 3jrp_A 222 SYLASVSQDRTCIIWTQDNEQGP-----------------------------------WKKTLLKEEKFPDVLWRASWS- 265 (379)
T ss_dssp EEEEEEETTSCEEEEEESSTTSC-----------------------------------CEEEESSSSCCSSCEEEEEEC-
T ss_pred CeEEEEeCCCEEEEEeCCCCCcc-----------------------------------ceeeeeccccCCCcEEEEEEc-
Confidence 99999999999999999874211 012223445688899999999
Q ss_pred cCCCCcEEEEecCCCeEEEEeCCC
Q 017194 301 FGERGKYLISGGNDKLVKVWDCSR 324 (375)
Q Consensus 301 ~~~~~~~l~s~~~dg~i~iwd~~~ 324 (375)
|++++|++++.||.|++|++..
T Consensus 266 --~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 266 --LSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp --SSSCCEEEEESSSSEEEEEEEE
T ss_pred --CCCCEEEEecCCCcEEEEeCCC
Confidence 9999999999999999999873
No 77
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-41 Score=297.63 Aligned_cols=289 Identities=12% Similarity=0.047 Sum_probs=223.0
Q ss_pred eeeecCCCceeEEEEecC-----CCCEEEEeCCCCcEEEEecccCce-----------eeEeeecCccEEEEEEeCCCCe
Q 017194 9 RRLRGHKATATCCIASRD-----RPGFVASSGEDGCICWFDLRSKDV-----------QLVTDVGNGPVTSLCFKSGNED 72 (375)
Q Consensus 9 ~~l~~h~~~i~~~~~~~~-----~~~~l~s~~~d~~i~iw~~~~~~~-----------~~~~~~~~~~v~~l~~~~~~~~ 72 (375)
..+.+|.+.|++++|+|+ ++.+||+++.||+|+|||+.+++. ...+.+|...|.+++|++++ .
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~ 279 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-T 279 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-E
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-e
Confidence 346788899999999996 257999999999999999987642 24677899999999999864 7
Q ss_pred EEEEcCCCeEEEEECCCCCcccccccccCCCcceeEE--EEcCCC-CeEEEEeCCCcEEEEeCcCceeeeeEecCccc--
Q 017194 73 IIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQI--VCNPKS-SFLACADDGGDVKIIDIRQHCLYKSLRAGHSS-- 147 (375)
Q Consensus 73 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-- 147 (375)
|++|+.||+|++||++++. .+...+.+|...|.++ .|+|++ ++|++++.|++|++||+++++.+..+. +|..
T Consensus 280 lasgs~DgtV~lWD~~~~~--~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~-~~~~~~ 356 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPE--VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTV-SRFRGS 356 (524)
T ss_dssp EEEEETTSEEEEEETTBCS--SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEE-EECSCC
T ss_pred EEEEeCCCEEEEEECCCCC--CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccc-cccccC
Confidence 9999999999999998653 2344567889999999 578887 899999999999999999988877777 6653
Q ss_pred ceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe
Q 017194 148 ICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK 227 (375)
Q Consensus 148 ~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~ 227 (375)
.|.+++|+|+++ .+++++.|++|++||++++.++..+. + |...|++++|+| ++++|++|+
T Consensus 357 ~v~~v~fsp~~~-~l~s~~~d~tv~lwd~~~~~~~~~l~-g------------H~~~V~sva~Sp------~g~~l~Sgs 416 (524)
T 2j04_B 357 NLVPVVYCPQIY-SYIYSDGASSLRAVPSRAAFAVHPLV-S------------RETTITAIGVSR------LHPMVLAGS 416 (524)
T ss_dssp SCCCEEEETTTT-EEEEECSSSEEEEEETTCTTCCEEEE-E------------CSSCEEEEECCS------SCCBCEEEE
T ss_pred cccceEeCCCcC-eEEEeCCCCcEEEEECcccccceeee-c------------CCCceEEEEeCC------CCCeEEEEE
Confidence 588999999998 79999999999999999988877766 3 578999999999 799999999
Q ss_pred cCCcEEEEeCCCcceeecccc----cCCCCCCceeecccccceeeeeeeecCCc-ceeEeeeeecCCCccEEEEEEeecC
Q 017194 228 GDGVVDVINIESELNISRSKS----TTKPLKGSQSTSKVNIRDAEMEILDQSGG-KRLHLDYSVGGHTAAASCVAFSMFG 302 (375)
Q Consensus 228 ~dg~i~i~d~~~~~~~~~~~~----~~~~~~~~~~~s~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~~ 302 (375)
.||+|++||+...... .... .....+..++++|+|..+........... ....++..+.+|...|.+++|+
T Consensus 417 ~Dgtv~lwd~~~~~~~-~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafs--- 492 (524)
T 2j04_B 417 ADGSLIITNAARRLLH-GIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWN--- 492 (524)
T ss_dssp TTTEEECCBSCSSTTT-CC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEEC---
T ss_pred CCCEEEEEechHhhcc-ccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECC---
Confidence 9999999998653111 1000 01112346789999985543222212111 1245667888999999999999
Q ss_pred CCC---cEEEEecCCCeEEEEeCCCc
Q 017194 303 ERG---KYLISGGNDKLVKVWDCSRF 325 (375)
Q Consensus 303 ~~~---~~l~s~~~dg~i~iwd~~~~ 325 (375)
|++ .++|+|+.||.|+||++...
T Consensus 493 p~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 493 ETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred CCCCccHHHHhhccCceEEEEEcccc
Confidence 774 59999999999999998763
No 78
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.8e-40 Score=280.10 Aligned_cols=296 Identities=17% Similarity=0.177 Sum_probs=223.9
Q ss_pred CeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCc----eeeEeeecCccEEEEEEeC--CCCeEEEEcCCCe
Q 017194 8 PRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKD----VQLVTDVGNGPVTSLCFKS--GNEDIIYVSSGKE 81 (375)
Q Consensus 8 ~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~----~~~~~~~~~~~v~~l~~~~--~~~~l~~~~~d~~ 81 (375)
...+++|.+.|++++|+|+ +++||+|+.||.|++||+.++. ....+.+|...|.+++|+| ++++|++++.|+.
T Consensus 4 ~~~~~gH~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFY-GRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp CCEECCCSSCEEEEEECSS-SSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cccCcccccceeEEEEcCC-CCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 4567899999999999998 8999999999999999998763 5667788999999999999 6899999999999
Q ss_pred EEEEECCCCCcc------cccccccCCCcceeEEEEcCC--CCeEEEEeCCCcEEEEeCcCceeeeeEe-----------
Q 017194 82 VKSFDVHMPASW------RPLESYNYNKEEINQIVCNPK--SSFLACADDGGDVKIIDIRQHCLYKSLR----------- 142 (375)
Q Consensus 82 i~iwd~~~~~~~------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~----------- 142 (375)
|++||++++... ..+..+..|...|.+++|+|+ +++|++++.||.|++||+++++.+..+.
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc
Confidence 999999875321 445667788999999999999 9999999999999999998876544332
Q ss_pred -cCcccceeEEEEeeC---CCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccC
Q 017194 143 -AGHSSICSSVQFIPW---KPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDK 218 (375)
Q Consensus 143 -~~~~~~v~~~~~~~~---~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 218 (375)
..|...+.+++|+|+ +. .+++++.++.+.+|+...++........ .|...|.+++|+|
T Consensus 163 ~~~~~~~~~~~~~~p~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~h~~~i~~~~~~p------ 224 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFSPE-KLAVSALEQAIIYQRGKDGKLHVAAKLP-----------GHKSLIRSISWAP------ 224 (351)
T ss_dssp CSSCSCCCEEEEECCCSSSCC-EEEEEETTEEEEEEECTTSCEEEEEECC-----------CCCSCEEEEEECC------
T ss_pred cCCcccceeEEEeccCCCCCc-EEEEecCCCcEEEEccCCCceeeeeecC-----------CCCcceeEEEECC------
Confidence 147788999999997 66 8999999999988888776653333221 1568899999999
Q ss_pred CC----CEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceee-------eeeeecCCcceeEeeeeec
Q 017194 219 TN----KICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAE-------MEILDQSGGKRLHLDYSVG 287 (375)
Q Consensus 219 ~~----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~-------~~~~~~~~~~~~~~~~~~~ 287 (375)
++ ++|++++.||.|++||++........... .........++.....+. ............+.+..+.
T Consensus 225 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (351)
T 3f3f_A 225 SIGRWYQLIATGCKDGRIRIFKITEKLSPLASEES-LTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHD 303 (351)
T ss_dssp CSSCSSEEEEEEETTSCEEEEEEEECC----------------------------------------CCSEEEEEEEEEC
T ss_pred CCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCc-ccceeccCCCcccccccccccccccceeeeecccccccEEEEEe
Confidence 66 89999999999999999875443322111 111111122222222211 1112223344567778899
Q ss_pred CCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCce
Q 017194 288 GHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQ 326 (375)
Q Consensus 288 ~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~ 326 (375)
+|...|++++|+ |++++|++++.||.|++|++.+++
T Consensus 304 ~h~~~v~~~~~s---~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 304 DHNGEVWSVSWN---LTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp TTSSCEEEEEEC---SSSCCEEEEETTSCEEEEEECTTS
T ss_pred cccccEEEEEEc---CCCCEEEEecCCCcEEEEecCcCc
Confidence 999999999999 999999999999999999999874
No 79
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.4e-40 Score=282.25 Aligned_cols=255 Identities=16% Similarity=0.227 Sum_probs=223.1
Q ss_pred CCCCeeeec-CCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEE
Q 017194 5 EAKPRRLRG-HKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVK 83 (375)
Q Consensus 5 ~~~~~~l~~-h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~ 83 (375)
++....+.. |.+.|++++|+|+ +++|++|+.||.|++||+.+++.+..+..|...|.+++|+ ++.+++++.|+.|+
T Consensus 123 ~~~~~~~~~~~~~~v~~v~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~ 199 (401)
T 4aez_A 123 GSVSALAETDESTYVASVKWSHD-GSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIH 199 (401)
T ss_dssp CCEEEEEECCTTCCEEEEEECTT-SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEE
T ss_pred CcEeEeeecCCCCCEEEEEECCC-CCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEE
Confidence 444445554 8899999999998 8999999999999999999999999999999999999995 57999999999999
Q ss_pred EEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEE
Q 017194 84 SFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVI 163 (375)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 163 (375)
+||++... ..+..+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+. .|...|.+++|+|++..+++
T Consensus 200 i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~p~~~~ll~ 276 (401)
T 4aez_A 200 HHDVRIAN--HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKT-NHNAAVKAVAWCPWQSNLLA 276 (401)
T ss_dssp EEETTSSS--CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEEC-CCSSCCCEEEECTTSTTEEE
T ss_pred EEecccCc--ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEec-CCcceEEEEEECCCCCCEEE
Confidence 99998532 3455666789999999999999999999999999999999999998898 89999999999998876777
Q ss_pred Eee--cCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEE--ecCCcEEEEeCCC
Q 017194 164 SGG--LDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVA--KGDGVVDVINIES 239 (375)
Q Consensus 164 ~~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~--~~dg~i~i~d~~~ 239 (375)
+++ .|+.|++||+++++.+..+.. ...+.+++|+| +++.++++ +.||.|++||+.+
T Consensus 277 ~~~gs~d~~i~i~d~~~~~~~~~~~~--------------~~~v~~~~~s~------~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 277 TGGGTMDKQIHFWNAATGARVNTVDA--------------GSQVTSLIWSP------HSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp EECCTTTCEEEEEETTTCCEEEEEEC--------------SSCEEEEEECS------SSSEEEEEECTTTCEEEEEEEET
T ss_pred EecCCCCCEEEEEECCCCCEEEEEeC--------------CCcEEEEEECC------CCCeEEEEeecCCCcEEEEecCC
Confidence 765 799999999999998888873 47899999999 79999995 4899999999986
Q ss_pred cceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEE
Q 017194 240 ELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKV 319 (375)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~i 319 (375)
+. ......+.+|...|.+++|+ |++++|++++.||.|++
T Consensus 337 ~~--------------------------------------~~~~~~~~~h~~~v~~~~~s---~dg~~l~s~~~dg~i~i 375 (401)
T 4aez_A 337 SG--------------------------------------LTKQVDIPAHDTRVLYSALS---PDGRILSTAASDENLKF 375 (401)
T ss_dssp TE--------------------------------------EEEEEEEECCSSCCCEEEEC---TTSSEEEEECTTSEEEE
T ss_pred cc--------------------------------------ceeEEEecCCCCCEEEEEEC---CCCCEEEEEeCCCcEEE
Confidence 31 23344577899999999999 99999999999999999
Q ss_pred EeCCCce
Q 017194 320 WDCSRFQ 326 (375)
Q Consensus 320 wd~~~~~ 326 (375)
|++.+++
T Consensus 376 w~~~~~~ 382 (401)
T 4aez_A 376 WRVYDGD 382 (401)
T ss_dssp EECCC--
T ss_pred EECCCCc
Confidence 9999984
No 80
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.9e-40 Score=303.28 Aligned_cols=270 Identities=20% Similarity=0.277 Sum_probs=218.0
Q ss_pred CCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEE
Q 017194 7 KPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFD 86 (375)
Q Consensus 7 ~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd 86 (375)
..+.+.+|...|.+++|+|+ +++|++|+.||+|+|||+.+++....+.+|...|.+++|+|++++|++++.|++|++||
T Consensus 422 ~~~~~~~h~~~v~~v~~s~~-g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd 500 (694)
T 3dm0_A 422 AQRRLTGHSHFVEDVVLSSD-GQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN 500 (694)
T ss_dssp EEEEEECCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ccceecCCCCcEEEEEECCC-CCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEE
Confidence 34678999999999999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccccccCCCcceeEEEEcCCC--CeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEE
Q 017194 87 VHMPASWRPLESYNYNKEEINQIVCNPKS--SFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVIS 164 (375)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 164 (375)
..............+|...|.+++|+|++ ..+++++.|+.|++||+++++....+. +|...|++++|+|+++ +|++
T Consensus 501 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~-~h~~~v~~v~~spdg~-~l~s 578 (694)
T 3dm0_A 501 TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA-GHTGYVSTVAVSPDGS-LCAS 578 (694)
T ss_dssp TTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSS-EEEE
T ss_pred CCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEc-CCCCCEEEEEEeCCCC-EEEE
Confidence 87543333334446788899999999986 579999999999999999999999999 9999999999999998 7999
Q ss_pred eecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceee
Q 017194 165 GGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNIS 244 (375)
Q Consensus 165 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 244 (375)
++.|+.|++||+++++.+..+. +...+.+++|+| ++.++++++ ++.|++||+++.....
T Consensus 579 g~~Dg~i~iwd~~~~~~~~~~~--------------~~~~v~~~~~sp------~~~~l~~~~-~~~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 579 GGKDGVVLLWDLAEGKKLYSLE--------------ANSVIHALCFSP------NRYWLCAAT-EHGIKIWDLESKSIVE 637 (694)
T ss_dssp EETTSBCEEEETTTTEEEECCB--------------CSSCEEEEEECS------SSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred EeCCCeEEEEECCCCceEEEec--------------CCCcEEEEEEcC------CCcEEEEEc-CCCEEEEECCCCCChh
Confidence 9999999999999988776655 246799999999 677776665 5679999999875544
Q ss_pred cccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCC
Q 017194 245 RSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSR 324 (375)
Q Consensus 245 ~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~ 324 (375)
............ . ..........+...+.+++|+ |+|++|++|+.||.|++|++..
T Consensus 638 ~~~~~~~~~~~~----~-----------------~~~~~~~~~~~~~~~~~l~~s---pdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 638 DLKVDLKAEAEK----A-----------------DNSGPAATKRKVIYCTSLNWS---ADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp EECCCCC-------------------------------------CCCCEEEEEEC---TTSSEEEEEETTSEEEEEEC--
T ss_pred hhcccccccccc----c-----------------cccccccCCceeEEeeeEEEc---CCCCEEEEEcCCCeEEEEeccC
Confidence 332211000000 0 000000112233458899999 9999999999999999999864
No 81
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-40 Score=281.19 Aligned_cols=269 Identities=17% Similarity=0.217 Sum_probs=219.8
Q ss_pred CceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCC--CCeEEEEeCCC
Q 017194 48 KDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPK--SSFLACADDGG 125 (375)
Q Consensus 48 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg 125 (375)
|+++..+.+|...|.+++|+|++++|++++.|+.|++||+... ....+..+.+|...|.+++|+++ +++|++++.||
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETT-EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCC-cceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence 3456788999999999999999999999999999999999743 23556667788999999999987 89999999999
Q ss_pred cEEEEeCcCce--eeeeEecCcccceeEEEEeeC--CCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccC
Q 017194 126 DVKIIDIRQHC--LYKSLRAGHSSICSSVQFIPW--KPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYN 201 (375)
Q Consensus 126 ~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (375)
.|++||+++++ .+..+. .|...|.+++|+|+ +. +|++++.|+.|++||++.+......... .+
T Consensus 80 ~v~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~-----------~~ 146 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHA-VHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSPIIID-----------AH 146 (379)
T ss_dssp CEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTSCCCEEEEE-----------CC
T ss_pred EEEEEEcCCCceeEeeeec-CCCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCCceeeEEec-----------CC
Confidence 99999999886 677777 89999999999999 77 8999999999999999987544433221 15
Q ss_pred CCceeEEeecCCcc-------ccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeec
Q 017194 202 PAFVHAIAIPDADM-------LDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQ 274 (375)
Q Consensus 202 ~~~v~~~~~~~~~~-------~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~ 274 (375)
...|.+++|+|... ..+++.++++++.||.|++||+++..
T Consensus 147 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--------------------------------- 193 (379)
T 3jrp_A 147 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA--------------------------------- 193 (379)
T ss_dssp TTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTT---------------------------------
T ss_pred CCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCC---------------------------------
Confidence 67899999998200 01148999999999999999998642
Q ss_pred CCcceeEeeeeecCCCccEEEEEEeecCCC---CcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeee
Q 017194 275 SGGKRLHLDYSVGGHTAAASCVAFSMFGER---GKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLC 351 (375)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 351 (375)
........+.+|...|.+++|+ |+ +++|++++.||.|++||+..+..... ..+.....|...|.+++
T Consensus 194 ---~~~~~~~~~~~h~~~v~~~~~s---p~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~----~~~~~~~~~~~~v~~~~ 263 (379)
T 3jrp_A 194 ---QTYVLESTLEGHSDWVRDVAWS---PTVLLRSYLASVSQDRTCIIWTQDNEQGPWK----KTLLKEEKFPDVLWRAS 263 (379)
T ss_dssp ---TEEEEEEEECCCSSCEEEEEEC---CCCSSSEEEEEEETTSCEEEEEESSTTSCCE----EEESSSSCCSSCEEEEE
T ss_pred ---cceeeEEEEecccCcEeEEEEC---CCCCCCCeEEEEeCCCEEEEEeCCCCCccce----eeeeccccCCCcEEEEE
Confidence 2234556788999999999999 88 89999999999999999998631100 12233455889999999
Q ss_pred ecCCCCCcEEEeeCCCeEEEEec
Q 017194 352 TTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 352 ~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
|+| ++++|++++.||.|++|++
T Consensus 264 ~s~-~g~~l~~~~~dg~i~iw~~ 285 (379)
T 3jrp_A 264 WSL-SGNVLALSGGDNKVTLWKE 285 (379)
T ss_dssp ECS-SSCCEEEEESSSSEEEEEE
T ss_pred EcC-CCCEEEEecCCCcEEEEeC
Confidence 999 9999999999999999996
No 82
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1e-40 Score=287.00 Aligned_cols=286 Identities=10% Similarity=0.082 Sum_probs=232.9
Q ss_pred ceeEEEEecCCCCEEEEeCCCCcEEEEecccC----ceeeEeeecCccEEEEEEeC-CCCeEEEEcCCCeEEEEECCCCC
Q 017194 17 TATCCIASRDRPGFVASSGEDGCICWFDLRSK----DVQLVTDVGNGPVTSLCFKS-GNEDIIYVSSGKEVKSFDVHMPA 91 (375)
Q Consensus 17 ~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~----~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~d~~i~iwd~~~~~ 91 (375)
....++++|+...++++++.||.|+||++.+. .....+.+|...|.+++|+| ++++|++++.|+.|++||+.++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 34557888874344556889999999998654 23556788999999999999 89999999999999999998764
Q ss_pred cc----cccccccCCCcceeEEEEcCCC-CeEEEEeCCCcEEEEeCcCceeeeeE--ecCcccceeEEEEeeCCCcEEEE
Q 017194 92 SW----RPLESYNYNKEEINQIVCNPKS-SFLACADDGGDVKIIDIRQHCLYKSL--RAGHSSICSSVQFIPWKPWEVIS 164 (375)
Q Consensus 92 ~~----~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~ 164 (375)
.. ..+..+.+|...|.+++|+|++ ++|++++.|+.|++||+++++.+..+ . .|...|.+++|+|++. +|++
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~ 193 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPD-VHPDTIYSVDWSRDGA-LICT 193 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTT-TCCSCEEEEEECTTSS-CEEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecC-CCCCceEEEEECCCCC-EEEE
Confidence 32 4556677899999999999998 69999999999999999999999998 6 8999999999999998 7999
Q ss_pred eecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCC-ceeEEeecCCccccCCCCEEEEE---ecCCcEEEEeCCCc
Q 017194 165 GGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPA-FVHAIAIPDADMLDKTNKICVVA---KGDGVVDVINIESE 240 (375)
Q Consensus 165 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~l~~~---~~dg~i~i~d~~~~ 240 (375)
++.|+.|++||+++++.+..+... +.. .+..+.|+| ++++|++| +.|+.|++||+++.
T Consensus 194 ~~~d~~i~iwd~~~~~~~~~~~~~------------~~~~~~~~~~~~~------~~~~l~~g~~~~~d~~i~iwd~~~~ 255 (402)
T 2aq5_A 194 SCRDKRVRVIEPRKGTVVAEKDRP------------HEGTRPVHAVFVS------EGKILTTGFSRMSERQVALWDTKHL 255 (402)
T ss_dssp EETTSEEEEEETTTTEEEEEEECS------------SCSSSCCEEEECS------TTEEEEEEECTTCCEEEEEEETTBC
T ss_pred EecCCcEEEEeCCCCceeeeeccC------------CCCCcceEEEEcC------CCcEEEEeccCCCCceEEEEcCccc
Confidence 999999999999999888877433 233 488999999 79999999 79999999999874
Q ss_pred ceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEE-EecCCCeEEE
Q 017194 241 LNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLI-SGGNDKLVKV 319 (375)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~-s~~~dg~i~i 319 (375)
.... . . ....|...+.+++|+ |++++|+ +|+.||.|++
T Consensus 256 ~~~~------------------------------------~-~-~~~~~~~~v~~~~~s---~~~~~l~~~g~~dg~i~i 294 (402)
T 2aq5_A 256 EEPL------------------------------------S-L-QELDTSSGVLLPFFD---PDTNIVYLCGKGDSSIRY 294 (402)
T ss_dssp SSCS------------------------------------E-E-EECCCCSSCEEEEEE---TTTTEEEEEETTCSCEEE
T ss_pred cCCc------------------------------------e-E-EeccCCCceeEEEEc---CCCCEEEEEEcCCCeEEE
Confidence 3210 0 1 122456779999999 9999886 5668999999
Q ss_pred EeCCCceeeeecchhhhhhhhcc--cccceeeeeecCCCCCcEEEeeCCCeEEEEec
Q 017194 320 WDCSRFQGVQTSINNDLLIKNIN--LNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
||+.+++ ..+..+.. |...|.+++|+| ++.++++ .|+.+++|++
T Consensus 295 ~d~~~~~--------~~~~~l~~~~~~~~v~~~~~sp-~~~~~~s--~~~~~~~~~l 340 (402)
T 2aq5_A 295 FEITSEA--------PFLHYLSMFSSKESQRGMGYMP-KRGLEVN--KCEIARFYKL 340 (402)
T ss_dssp EEECSST--------TCEEEEEEECCSSCCSEEEECC-GGGSCGG--GTEEEEEEEE
T ss_pred EEecCCC--------cceEeecccccCCcccceEEec-cccccee--cceeEEEEEc
Confidence 9999873 11223333 568999999999 8877764 5679999986
No 83
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=9e-40 Score=275.81 Aligned_cols=277 Identities=13% Similarity=0.127 Sum_probs=221.1
Q ss_pred eEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCc-ccccccccCCCcceeEEEEcC--CCCeEEEEeCCCcEE
Q 017194 52 LVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPAS-WRPLESYNYNKEEINQIVCNP--KSSFLACADDGGDVK 128 (375)
Q Consensus 52 ~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~ 128 (375)
..+.+|...|++++|+|++++|++++.|+.|++||+.++.. ......+.+|...|.+++|+| ++++|++++.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 45678999999999999999999999999999999986432 245566678899999999999 699999999999999
Q ss_pred EEeCcCc---------eeeeeEecCcccceeEEEEeeC--CCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCC
Q 017194 129 IIDIRQH---------CLYKSLRAGHSSICSSVQFIPW--KPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAG 197 (375)
Q Consensus 129 iwd~~~~---------~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 197 (375)
+||++++ +.+..+. .|...|.+++|+|+ +. ++++++.|+.|++||+++++.+..+....+.......
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLN-DSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEEC-CCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred EEecCCCcccccccCcceeeeec-ccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCChHHhccccccccccccccc
Confidence 9999876 5577787 89999999999999 87 7999999999999999988776554421111011111
Q ss_pred cccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCc
Q 017194 198 QCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGG 277 (375)
Q Consensus 198 ~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~ 277 (375)
...+...+.+++|+|.. .++.++++++.++.+.+|+....
T Consensus 163 ~~~~~~~~~~~~~~p~~---~~~~~l~~~~~~~~~~~~~~~~~------------------------------------- 202 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSR---FSPEKLAVSALEQAIIYQRGKDG------------------------------------- 202 (351)
T ss_dssp CSSCSCCCEEEEECCCS---SSCCEEEEEETTEEEEEEECTTS-------------------------------------
T ss_pred cCCcccceeEEEeccCC---CCCcEEEEecCCCcEEEEccCCC-------------------------------------
Confidence 11255789999999831 13899999999999988877643
Q ss_pred ceeEeeeeecCCCccEEEEEEeecCCCC----cEEEEecCCCeEEEEeCCCceeeee-----------------------
Q 017194 278 KRLHLDYSVGGHTAAASCVAFSMFGERG----KYLISGGNDKLVKVWDCSRFQGVQT----------------------- 330 (375)
Q Consensus 278 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~----~~l~s~~~dg~i~iwd~~~~~~~~~----------------------- 330 (375)
.......+.+|...|.+++|+ |++ ++|++++.||.|++||+........
T Consensus 203 -~~~~~~~~~~h~~~i~~~~~~---p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (351)
T 3f3f_A 203 -KLHVAAKLPGHKSLIRSISWA---PSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQG 278 (351)
T ss_dssp -CEEEEEECCCCCSCEEEEEEC---CCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------
T ss_pred -ceeeeeecCCCCcceeEEEEC---CCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccccc
Confidence 224456788899999999999 887 8999999999999999987421100
Q ss_pred --------------cchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 331 --------------SINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 331 --------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
....+.+..+.+|...|++++|+| ++++|++++.||.|++|+++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 279 RSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNL-TGTILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp ------------CCSEEEEEEEEECTTSSCEEEEEECS-SSCCEEEEETTSCEEEEEEC
T ss_pred ccccccceeeeecccccccEEEEEecccccEEEEEEcC-CCCEEEEecCCCcEEEEecC
Confidence 001134445677999999999999 99999999999999999974
No 84
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=7.5e-39 Score=269.33 Aligned_cols=260 Identities=21% Similarity=0.292 Sum_probs=220.1
Q ss_pred CCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEE
Q 017194 7 KPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFD 86 (375)
Q Consensus 7 ~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd 86 (375)
..+.+++|.+.|.+++|+|+ +++|++++.|+.|++|+............+...+..+.+++++++|++++.|+.+++||
T Consensus 78 ~~~~l~~h~~~V~~~~~s~d-g~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d 156 (340)
T 4aow_A 78 PQRALRGHSHFVSDVVISSD-GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 156 (340)
T ss_dssp EEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred eeEEEeCCCCCEEEEEECCC-CCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEE
Confidence 45678999999999999999 89999999999999999999988888888899999999999999999999999999999
Q ss_pred CCCCCcccccccccCCCcceeEEEEcCCC--CeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEE
Q 017194 87 VHMPASWRPLESYNYNKEEINQIVCNPKS--SFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVIS 164 (375)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 164 (375)
+.... .......+|...+..++|++++ .++++++.|+.|++||+++++.+..+. +|...|++++|+|+++ +|++
T Consensus 157 ~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~-~h~~~v~~~~~s~~~~-~l~s 232 (340)
T 4aow_A 157 TLGVC--KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI-GHTGYLNTVTVSPDGS-LCAS 232 (340)
T ss_dssp TTSCE--EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSS-EEEE
T ss_pred eCCCc--eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEec-CCCCcEEEEEECCCCC-EEEE
Confidence 87543 3334456778899999999864 568899999999999999999999999 9999999999999998 7999
Q ss_pred eecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceee
Q 017194 165 GGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNIS 244 (375)
Q Consensus 165 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 244 (375)
++.|+.|++||+++.+.+..+.. ...+.++.++| ++ .+++++.|+.|++||+++.....
T Consensus 233 ~s~Dg~i~iwd~~~~~~~~~~~~--------------~~~v~~~~~~~------~~-~~~~~~~d~~i~iwd~~~~~~~~ 291 (340)
T 4aow_A 233 GGKDGQAMLWDLNEGKHLYTLDG--------------GDIINALCFSP------NR-YWLCAATGPSIKIWDLEGKIIVD 291 (340)
T ss_dssp EETTCEEEEEETTTTEEEEEEEC--------------SSCEEEEEECS------SS-SEEEEEETTEEEEEETTTTEEEE
T ss_pred EeCCCeEEEEEeccCceeeeecC--------------CceEEeeecCC------CC-ceeeccCCCEEEEEECCCCeEEE
Confidence 99999999999999998888873 46899999998 44 56667789999999998754433
Q ss_pred cccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCC
Q 017194 245 RSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSR 324 (375)
Q Consensus 245 ~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~ 324 (375)
..... .......+|...|++++|+ |+|++|++|+.||.|+|||+++
T Consensus 292 ~~~~~-------------------------------~~~~~~~~h~~~v~~l~~s---~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 292 ELKQE-------------------------------VISTSSKAEPPQCTSLAWS---ADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp EECCC--------------------------------------CCCCCEEEEEEC---TTSSEEEEEETTSCEEEEEEEC
T ss_pred ecccc-------------------------------ceeeeccCCCCCEEEEEEC---CCCCEEEEEeCCCEEEEEeCCC
Confidence 22211 1223456789999999999 9999999999999999999998
Q ss_pred ce
Q 017194 325 FQ 326 (375)
Q Consensus 325 ~~ 326 (375)
++
T Consensus 338 Gt 339 (340)
T 4aow_A 338 GT 339 (340)
T ss_dssp --
T ss_pred cC
Confidence 73
No 85
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=8.6e-39 Score=276.41 Aligned_cols=253 Identities=14% Similarity=0.215 Sum_probs=219.8
Q ss_pred CCCCCeee--ecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCe
Q 017194 4 AEAKPRRL--RGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKE 81 (375)
Q Consensus 4 ~~~~~~~l--~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~ 81 (375)
+++..+.+ .+|.+.|++|+|+|+ +++||+|+.||+|+|||+++++.+..+.+|...+.+++++ +..|++++.|+.
T Consensus 134 tg~~~~~~~~~~~~~~V~sv~fspd-g~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~ 210 (420)
T 4gga_A 134 SGDILQLLQMEQPGEYISSVAWIKE-GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGH 210 (420)
T ss_dssp TCCEEEEEECCSTTCCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSE
T ss_pred CCCEEEEEEecCCCCcEEEEEECCC-CCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCc
Confidence 45555544 468889999999999 8999999999999999999999999999999999998875 578999999999
Q ss_pred EEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCce----eeeeEecCcccceeEEEEeeC
Q 017194 82 VKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHC----LYKSLRAGHSSICSSVQFIPW 157 (375)
Q Consensus 82 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~~v~~~~~~~~ 157 (375)
+++||..... ..+..+.+|...+..+.++|+++++++++.|+.+++|+..+++ .+.... .|...|.+++|+|.
T Consensus 211 i~~~d~~~~~--~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~-~~~~~V~~~~~~p~ 287 (420)
T 4gga_A 211 IHHHDVRVAE--HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFT-QHQGAVKAVAWCPW 287 (420)
T ss_dssp EEEEETTSSS--CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEEC-CCSSCEEEEEECTT
T ss_pred eeEeeecccc--eeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeec-ccCCceeeeeeCCC
Confidence 9999988643 4456677889999999999999999999999999999998764 345566 78999999999999
Q ss_pred CCcEEEEe--ecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe--cCCcEE
Q 017194 158 KPWEVISG--GLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK--GDGVVD 233 (375)
Q Consensus 158 ~~~~l~~~--~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~--~dg~i~ 233 (375)
+..+++++ +.|++|++||++++++...+..+ ..+.++.|+| +++.+++++ .|+.|+
T Consensus 288 ~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~--------------~~v~~~~~~~------~~~~lv~~sg~~d~~I~ 347 (420)
T 4gga_A 288 QSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH--------------SQVCSILWSP------HYKELISGHGFAQNQLV 347 (420)
T ss_dssp CTTEEEEEECTTTCEEEEEETTTTEEEEEEECS--------------SCEEEEEEET------TTTEEEEEECTTTCCEE
T ss_pred cccEEEEEeecCCCEEEEEeCCccccceeeccc--------------cceeeeeecC------CCCeEEEEEecCCCEEE
Confidence 88677654 57999999999999998888743 6789999999 688887765 789999
Q ss_pred EEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecC
Q 017194 234 VINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGN 313 (375)
Q Consensus 234 i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~ 313 (375)
+||+.++ +++..+.+|...|.+++|+ |+|++|+||+.
T Consensus 348 iwd~~~~----------------------------------------~~v~~l~gH~~~V~~l~~s---pdg~~l~S~s~ 384 (420)
T 4gga_A 348 IWKYPTM----------------------------------------AKVAELKGHTSRVLSLTMS---PDGATVASAAA 384 (420)
T ss_dssp EEETTTC----------------------------------------CEEEEECCCSSCEEEEEEC---TTSSCEEEEET
T ss_pred EEECCCC----------------------------------------cEEEEEcCCCCCEEEEEEc---CCCCEEEEEec
Confidence 9999874 4556788999999999999 99999999999
Q ss_pred CCeEEEEeCCCc
Q 017194 314 DKLVKVWDCSRF 325 (375)
Q Consensus 314 dg~i~iwd~~~~ 325 (375)
|++|+|||+...
T Consensus 385 D~tvriWdv~~~ 396 (420)
T 4gga_A 385 DETLRLWRCFEL 396 (420)
T ss_dssp TTEEEEECCSCS
T ss_pred CCeEEEEECCCC
Confidence 999999999875
No 86
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1e-39 Score=277.41 Aligned_cols=250 Identities=14% Similarity=0.168 Sum_probs=211.4
Q ss_pred CCCceeEEEEecCC---CCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeC-CCCeEEEEcCCCeEEEEECCC
Q 017194 14 HKATATCCIASRDR---PGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKS-GNEDIIYVSSGKEVKSFDVHM 89 (375)
Q Consensus 14 h~~~i~~~~~~~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~d~~i~iwd~~~ 89 (375)
|...|++++|+|+. +++|++|+.||.|++||+.+++.+..+..|...|.+++|+| ++++|++++.|+.|++||+++
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 55789999999983 35899999999999999999999999999999999999999 899999999999999999998
Q ss_pred CCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEe---------------------------
Q 017194 90 PASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLR--------------------------- 142 (375)
Q Consensus 90 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--------------------------- 142 (375)
++....+..+..|...|.+++|+|++++|++++.||.|++||+++++....+.
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 76655555557789999999999999999999999999999999776544333
Q ss_pred cCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCc--------------ceEEecCCCCCCCCCCcccCCCceeEE
Q 017194 143 AGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRP--------------NKIVNFGLPENNGNAGQCYNPAFVHAI 208 (375)
Q Consensus 143 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~v~~~ 208 (375)
..|...|.+++|+ ++ ++++++.|+.|++||+++++. +..+.. +...+.++
T Consensus 228 ~~~~~~v~~~~~~--~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~v~~~ 291 (366)
T 3k26_A 228 DIHRNYVDCVRWL--GD-LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDY-------------SQCDIWYM 291 (366)
T ss_dssp SSCSSCCCEEEEE--TT-EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEEC-------------SSCCSSCC
T ss_pred cCCcceEEEEEEc--CC-EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccc-------------cCCcEEEE
Confidence 0389999999999 45 799999999999999987754 333331 45678999
Q ss_pred eecCCccccCC--CCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeee
Q 017194 209 AIPDADMLDKT--NKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSV 286 (375)
Q Consensus 209 ~~~~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~ 286 (375)
+|+| + +++|++++.||.|++||+.+++.. ......+
T Consensus 292 ~~s~------~~~~~~l~~~~~dg~i~vwd~~~~~~~------------------------------------~~~~~~~ 329 (366)
T 3k26_A 292 RFSM------DFWQKMLALGNQVGKLYVWDLEVEDPH------------------------------------KAKCTTL 329 (366)
T ss_dssp CCEE------CTTSSEEEEECTTSCEEEEECCSSSGG------------------------------------GCEEEEE
T ss_pred EEcC------CCCCcEEEEEecCCcEEEEECCCCCCc------------------------------------cccceEE
Confidence 9998 6 999999999999999999975321 1123355
Q ss_pred cCC--CccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCC
Q 017194 287 GGH--TAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSR 324 (375)
Q Consensus 287 ~~~--~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~ 324 (375)
.+| ...|.+++|+ |++++|++++.||.|++||+.+
T Consensus 330 ~~~~~~~~v~~~~~s---~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 330 THHKCGAAIRQTSFS---RDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp CCTTCCSCEEEEEEC---TTSSEEEEEETTSEEEEEEC--
T ss_pred cccccCCceEEEEeC---CCCCeEEEEeCCCEEEEEEecC
Confidence 666 7899999999 9999999999999999999853
No 87
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-39 Score=280.52 Aligned_cols=312 Identities=13% Similarity=0.113 Sum_probs=235.4
Q ss_pred CcEEEEecccCceeeEeeecCccEEEEEEeCCCC-eEEEEcCCCeEEEEEC----CCCCc------ccccc-ccc-----
Q 017194 38 GCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNE-DIIYVSSGKEVKSFDV----HMPAS------WRPLE-SYN----- 100 (375)
Q Consensus 38 ~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~d~~i~iwd~----~~~~~------~~~~~-~~~----- 100 (375)
..+.+|+++..........|..+|.+++|+|+++ +|++++.|+.|++|++ .+++. ...+. .+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (425)
T 1r5m_A 25 SIDSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASS 104 (425)
T ss_dssp ---------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC---
T ss_pred cccccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccc
Confidence 4566788876665555556779999999999999 9999999999999999 76652 11111 111
Q ss_pred -CCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCC
Q 017194 101 -YNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG 179 (375)
Q Consensus 101 -~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~ 179 (375)
+|...|.+++|+|++++|++++.||.|++|| .+++.+..+. .|...|.+++|+|+++ +|++++.|+.|++||++++
T Consensus 105 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~ 181 (425)
T 1r5m_A 105 GKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLN-FHRAPIVSVKWNKDGT-HIISMDVENVTILWNVISG 181 (425)
T ss_dssp ---CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEEC-CCCSCEEEEEECTTSS-EEEEEETTCCEEEEETTTT
T ss_pred cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeecc-CCCccEEEEEECCCCC-EEEEEecCCeEEEEECCCC
Confidence 2577999999999999999999999999999 6778888888 8999999999999998 7999999999999999999
Q ss_pred CcceEEecCCCCCCCC--CCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCce
Q 017194 180 RPNKIVNFGLPENNGN--AGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQ 257 (375)
Q Consensus 180 ~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 257 (375)
+.+..+.......... .........+.+++|+| +..+++++.+|.|++||+.+........ .....+..+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~g~i~~~d~~~~~~~~~~~-~~~~~i~~~ 253 (425)
T 1r5m_A 182 TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD-------DDKFVIPGPKGAIFVYQITEKTPTGKLI-GHHGPISVL 253 (425)
T ss_dssp EEEEEECCC---------------CCCBSCCEEEE-------TTEEEEECGGGCEEEEETTCSSCSEEEC-CCSSCEEEE
T ss_pred cEEEEeeccccCccceeeccccCCcceeeEEEEcC-------CCEEEEEcCCCeEEEEEcCCCceeeeec-cCCCceEEE
Confidence 8888776441100000 00000011288899987 4668999999999999999876554443 344667889
Q ss_pred eecccccceeeee---eeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchh
Q 017194 258 STSKVNIRDAEME---ILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINN 334 (375)
Q Consensus 258 ~~s~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 334 (375)
+++|+++++++.+ ....++....+....+.+|...|.+++|+ |++ ++++++.|+.|++||+.++
T Consensus 254 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~---~~~-~l~~~~~d~~i~i~d~~~~--------- 320 (425)
T 1r5m_A 254 EFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWV---GDD-KVISCSMDGSVRLWSLKQN--------- 320 (425)
T ss_dssp EEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEE---TTT-EEEEEETTSEEEEEETTTT---------
T ss_pred EECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEEC---CCC-EEEEEeCCCcEEEEECCCC---------
Confidence 9999999888633 22233333445566777899999999999 888 9999999999999999998
Q ss_pred hhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEec
Q 017194 335 DLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 335 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
+.+..+..|...|.+++|+| ++++|++++.||.|++|++
T Consensus 321 ~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~~~ 359 (425)
T 1r5m_A 321 TLLALSIVDGVPIFAGRISQ-DGQKYAVAFMDGQVNVYDL 359 (425)
T ss_dssp EEEEEEECTTCCEEEEEECT-TSSEEEEEETTSCEEEEEC
T ss_pred cEeEecccCCccEEEEEEcC-CCCEEEEEECCCeEEEEEC
Confidence 55556678899999999999 9999999999999999997
No 88
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.7e-39 Score=274.59 Aligned_cols=287 Identities=13% Similarity=0.087 Sum_probs=221.4
Q ss_pred CCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeE--eeecCccEEEEEEeCCCCeEEEEcCCCeEEE
Q 017194 7 KPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLV--TDVGNGPVTSLCFKSGNEDIIYVSSGKEVKS 84 (375)
Q Consensus 7 ~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~--~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~i 84 (375)
.+..+.+|...|++++|+|+ +++|++++.||.|++||+++++.... +..|...|.+++|+|++++|++++.|+.|++
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 122 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPD-SNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISI 122 (372)
T ss_dssp EEEEEECCSSCEEEEEEETT-TTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEE
T ss_pred eeeeecCCCCcccEEEEeCC-CCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEE
Confidence 67788999999999999998 89999999999999999988875444 3568999999999999999999999999999
Q ss_pred EECCCCCccccccc-ccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCc------------------CceeeeeEecCc
Q 017194 85 FDVHMPASWRPLES-YNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIR------------------QHCLYKSLRAGH 145 (375)
Q Consensus 85 wd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~------------------~~~~~~~~~~~~ 145 (375)
||++.+........ ...|...|.+++|+|++++|++++.||.|++||++ .++.+..+. .|
T Consensus 123 ~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 201 (372)
T 1k8k_C 123 CYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SS 201 (372)
T ss_dssp EEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CC
T ss_pred EEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC-CC
Confidence 99987653322332 25678899999999999999999999999999953 567888888 89
Q ss_pred ccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEE
Q 017194 146 SSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVV 225 (375)
Q Consensus 146 ~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~ 225 (375)
...|.+++|+|+++ +|++++.|+.|++||+++++.+..+.. +...+.+++|+| ++.++++
T Consensus 202 ~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~-------------~~~~v~~~~~~~------~~~~l~~ 261 (372)
T 1k8k_C 202 CGWVHGVCFSANGS-RVAWVSHDSTVCLADADKKMAVATLAS-------------ETLPLLAVTFIT------ESSLVAA 261 (372)
T ss_dssp SSCEEEEEECSSSS-EEEEEETTTEEEEEEGGGTTEEEEEEC-------------SSCCEEEEEEEE------TTEEEEE
T ss_pred CCeEEEEEECCCCC-EEEEEeCCCEEEEEECCCCceeEEEcc-------------CCCCeEEEEEec------CCCEEEE
Confidence 99999999999998 799999999999999999998888874 357899999999 7888887
Q ss_pred EecCCcEEEEeCCC--cceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEee------eee-cCCCccEEEE
Q 017194 226 AKGDGVVDVINIES--ELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLD------YSV-GGHTAAASCV 296 (375)
Q Consensus 226 ~~~dg~i~i~d~~~--~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~v~~~ 296 (375)
+ .|+.|++|++.+ +......... ..... ..+.... ...+.... ...... ..+ .+|...|.++
T Consensus 262 ~-~d~~i~i~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~~v~~~ 332 (372)
T 1k8k_C 262 G-HDCFPVLFTYDSAAGKLSFGGRLD--VPKQS----SQRGLTA-RERFQNLD-KKASSEGSAAAGAGLDSLHKNSVSQI 332 (372)
T ss_dssp E-TTSSCEEEEEETTTTEEEECCCCC--CC------------CH-HHHHHHCC-CCC---------CCCSSSSSSCEEEE
T ss_pred E-eCCeEEEEEccCcCceEEEeeccC--ccccc----hhhhcch-hhhhhhcc-cccccccCccccccccccccCCccee
Confidence 7 999999999987 3211110000 00000 0000000 00000000 000111 233 4899999999
Q ss_pred EEeecCCCC---cEEEEecCCCeEEEEeCCCce
Q 017194 297 AFSMFGERG---KYLISGGNDKLVKVWDCSRFQ 326 (375)
Q Consensus 297 ~~s~~~~~~---~~l~s~~~dg~i~iwd~~~~~ 326 (375)
+|.+ ++| .+|++|+.||.|++||+.+++
T Consensus 333 ~~~~--~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 333 SVLS--GGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp EEEE--STTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred EEec--CCCcceeeEEEecCCCceEEEEecChh
Confidence 9774 677 999999999999999998863
No 89
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-38 Score=267.56 Aligned_cols=255 Identities=15% Similarity=0.183 Sum_probs=226.0
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCC----
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSG---- 79 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d---- 79 (375)
+++.+..+.+|.+.|.+++|+|+ +++|++++.||.|++||+.+++.+..+. +...|.+++|+|+++++++++.+
T Consensus 63 ~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~ 140 (369)
T 3zwl_B 63 NGERLGTLDGHTGTIWSIDVDCF-TKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKN 140 (369)
T ss_dssp TCCEEEEECCCSSCEEEEEECTT-SSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTB
T ss_pred CchhhhhhhhcCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCC
Confidence 55677889999999999999998 8999999999999999999999988888 88999999999999999999998
Q ss_pred -CeEEEEECCCCCccc--------ccccccCCCc--ceeEEEEcCCCCeEEEEeCCCcEEEEeCcC-ceeeeeEecCccc
Q 017194 80 -KEVKSFDVHMPASWR--------PLESYNYNKE--EINQIVCNPKSSFLACADDGGDVKIIDIRQ-HCLYKSLRAGHSS 147 (375)
Q Consensus 80 -~~i~iwd~~~~~~~~--------~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~ 147 (375)
+.|++||+....... .+..+..|.. .+.+++|+|++++|++++.||.|++||+++ .+.+..+. .|..
T Consensus 141 ~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~ 219 (369)
T 3zwl_B 141 PGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSID-LHEK 219 (369)
T ss_dssp CCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEE-CCSS
T ss_pred CCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEe-cCCC
Confidence 999999998654322 2223334444 899999999999999999999999999998 78888888 8999
Q ss_pred ceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe
Q 017194 148 ICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK 227 (375)
Q Consensus 148 ~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~ 227 (375)
.|.+++|+|++. +|++++.|+.|++||+++++.+..+. +...+..++|+| +++++++++
T Consensus 220 ~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~--------------~~~~~~~~~~~~------~~~~l~~~~ 278 (369)
T 3zwl_B 220 SISDMQFSPDLT-YFITSSRDTNSFLVDVSTLQVLKKYE--------------TDCPLNTAVITP------LKEFIILGG 278 (369)
T ss_dssp CEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEE--------------CSSCEEEEEECS------SSSEEEEEE
T ss_pred ceeEEEECCCCC-EEEEecCCceEEEEECCCCceeeeec--------------CCCCceeEEecC------CCceEEEee
Confidence 999999999998 79999999999999999999888887 347899999999 799999999
Q ss_pred cCC--------------cEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccE
Q 017194 228 GDG--------------VVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAA 293 (375)
Q Consensus 228 ~dg--------------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 293 (375)
.++ .+++||..++ +.+..+.+|...|
T Consensus 279 ~~~~~~~~~~~~~~~~~~i~~~d~~~~----------------------------------------~~~~~~~~~~~~v 318 (369)
T 3zwl_B 279 GQEAKDVTTTSANEGKFEARFYHKIFE----------------------------------------EEIGRVQGHFGPL 318 (369)
T ss_dssp CCC-------------CEEEEEETTTC----------------------------------------CEEEEEECCSSCE
T ss_pred cCCCceEEEEecCCCcceeEEEecCCC----------------------------------------cchhheecccCcE
Confidence 988 7888887764 3445678899999
Q ss_pred EEEEEeecCCCCcEEEEecCCCeEEEEeCCCc
Q 017194 294 SCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325 (375)
Q Consensus 294 ~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~ 325 (375)
.+++|+ |++++|++++.||.|++|+++.+
T Consensus 319 ~~~~~s---~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 319 NTVAIS---PQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp EEEEEC---TTSSEEEEEETTSEEEEEEECHH
T ss_pred EEEEEC---CCCCEEEEEcCCCeEEEEECccc
Confidence 999999 99999999999999999999886
No 90
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.7e-38 Score=273.75 Aligned_cols=267 Identities=9% Similarity=0.074 Sum_probs=219.6
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEE
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVK 83 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~ 83 (375)
+++....+.+|.+.|++++|+|+ +++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 128 ~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~ 206 (420)
T 3vl1_A 128 FNLQREIDQAHVSEITKLKFFPS-GEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIR 206 (420)
T ss_dssp SCEEEEETTSSSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred CcceeeecccccCccEEEEECCC-CCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEE
Confidence 34445566799999999999999 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCCcccccccccCCC---------------------cceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEe
Q 017194 84 SFDVHMPASWRPLESYNYNK---------------------EEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLR 142 (375)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~---------------------~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 142 (375)
+||+++++....+.....|. ..+.+++|+|++++|++++.||.|++||+++++.+..+.
T Consensus 207 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 286 (420)
T 3vl1_A 207 LWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLP 286 (420)
T ss_dssp EEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcc
Confidence 99999876655554433333 445556668899999999999999999999988877776
Q ss_pred cCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCc-ceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCC
Q 017194 143 AGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRP-NKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNK 221 (375)
Q Consensus 143 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 221 (375)
..|...|.+++|+|+++.+|++++.||.|++||+++++. +..+..+ +...+.++.+. +++
T Consensus 287 ~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~------------~~~~v~~~~~~-------~~~ 347 (420)
T 3vl1_A 287 SKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLIN------------EGTPINNVYFA-------AGA 347 (420)
T ss_dssp CTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEES------------TTSCEEEEEEE-------TTE
T ss_pred cccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhcc------------CCCCceEEEeC-------CCC
Confidence 468899999999999976799999999999999998754 6667654 45788888665 488
Q ss_pred EEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeec
Q 017194 222 ICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMF 301 (375)
Q Consensus 222 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 301 (375)
+|++++.||.|++||+............ .....+..|...|.+++|+
T Consensus 348 ~l~s~~~d~~v~iw~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~v~~~~~s-- 394 (420)
T 3vl1_A 348 LFVSSGFDTSIKLDIISDPESERPAIEF-------------------------------ETPTFLVSNDDAVSQFCYV-- 394 (420)
T ss_dssp EEEEETTTEEEEEEEECCTTCCSCEECT-------------------------------TSCEEECCSSCCCCEEEEE--
T ss_pred EEEEecCCccEEEEeccCCCCCccceec-------------------------------cCccEEccCCcceEEEEEc--
Confidence 9999999999999999874322111100 1112355788899999999
Q ss_pred CCCCc---EEEEecCCCeEEEEeCCC
Q 017194 302 GERGK---YLISGGNDKLVKVWDCSR 324 (375)
Q Consensus 302 ~~~~~---~l~s~~~dg~i~iwd~~~ 324 (375)
|+++ .|++.+.+|.+.+|++++
T Consensus 395 -~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 395 -SDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp -CCSSSSCEEEEEETTTEEEEEESCC
T ss_pred -cCCCCcceEEEEcCCceEEEEeccC
Confidence 8888 677777789999999875
No 91
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3e-38 Score=271.41 Aligned_cols=288 Identities=11% Similarity=0.091 Sum_probs=220.0
Q ss_pred CCeeeecCCCceeEEEEecC---CC---CEEEEeCCCCcEEEEecccCce-----eeEeeec-----CccEEEEEEe---
Q 017194 7 KPRRLRGHKATATCCIASRD---RP---GFVASSGEDGCICWFDLRSKDV-----QLVTDVG-----NGPVTSLCFK--- 67 (375)
Q Consensus 7 ~~~~l~~h~~~i~~~~~~~~---~~---~~l~s~~~d~~i~iw~~~~~~~-----~~~~~~~-----~~~v~~l~~~--- 67 (375)
.+..+.+|..+|++++|+|+ ++ ++|++++.||.|++|++.+++. ...+..| ...|.+++|+
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC
T ss_pred cceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc
Confidence 57788999999999999996 36 7999999999999999999887 8888888 5999999999
Q ss_pred -CCCCe-EEEEcCCCeEEEEECCC------CCccc--ccccc-------cCCCcceeEEEEcCCCCeEEEEeCCCcEEEE
Q 017194 68 -SGNED-IIYVSSGKEVKSFDVHM------PASWR--PLESY-------NYNKEEINQIVCNPKSSFLACADDGGDVKII 130 (375)
Q Consensus 68 -~~~~~-l~~~~~d~~i~iwd~~~------~~~~~--~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw 130 (375)
|++++ |++++.|+.|++||+.+ ++... ....+ ..|...|.+++|+|++ ++++++.||.|++|
T Consensus 134 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 134 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQIS 212 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEE
T ss_pred CCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEE
Confidence 99999 99999999999999986 43333 00033 3478899999999999 99999999999999
Q ss_pred eCcCceeeeeEecC---c---ccceeEEEEeeCCCcEEEEeecC---CeEEEeeCCCCCcceEEecCCCCCCCCCCcccC
Q 017194 131 DIRQHCLYKSLRAG---H---SSICSSVQFIPWKPWEVISGGLD---SKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYN 201 (375)
Q Consensus 131 d~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~~l~~~~~d---~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (375)
|+++++.+..+. . | ...|.+++|+|++. +|++++.| +.|++||+++++.+..+...............|
T Consensus 213 d~~~~~~~~~~~-~~~~h~~~~~~i~~i~~~~~~~-~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (397)
T 1sq9_A 213 ELSTLRPLYNFE-SQHSMINNSNSIRSVKFSPQGS-LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAH 290 (397)
T ss_dssp ETTTTEEEEEEE-CCC---CCCCCEEEEEECSSTT-EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSB
T ss_pred ECCCCceeEEEe-ccccccccCCccceEEECCCCC-EEEEEecCCCCceEEEEECCCCcccceeccCccccccccccccc
Confidence 999999999998 8 8 99999999999998 79999999 999999999998888776410000000011113
Q ss_pred CCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeE
Q 017194 202 PAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLH 281 (375)
Q Consensus 202 ~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~ 281 (375)
...|.+++|+| ++++|++++.||.|++||+++++............. ...+ ... .
T Consensus 291 ~~~v~~~~~~~------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~----~~~~--------------~~~-g 345 (397)
T 1sq9_A 291 SSWVMSLSFND------SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIE----IEED--------------ILA-V 345 (397)
T ss_dssp SSCEEEEEECS------SSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCS----SGGG--------------CCC-B
T ss_pred CCcEEEEEECC------CCCEEEEEeCCCeEEEEEcCCCceeEEEecccCccc----chhh--------------hhc-c
Confidence 57899999999 799999999999999999997643322220000000 0000 000 0
Q ss_pred eeeeecCCCccEEEEEEeecCCCC----------cEEEEecCCCeEEEEeCCCc
Q 017194 282 LDYSVGGHTAAASCVAFSMFGERG----------KYLISGGNDKLVKVWDCSRF 325 (375)
Q Consensus 282 ~~~~~~~~~~~v~~~~~s~~~~~~----------~~l~s~~~dg~i~iwd~~~~ 325 (375)
.......|...|.+++|+ |++ ++|++++.||.|++|+++++
T Consensus 346 ~~~~~~~~~~~v~~~~~~---~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 346 DEHGDSLAEPGVFDVKFL---KKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CTTSCBCSSCCEEEEEEE---CTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred ccccccccCCceeEEEec---cccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 000122348999999999 888 79999999999999999875
No 92
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.5e-38 Score=274.11 Aligned_cols=268 Identities=13% Similarity=0.196 Sum_probs=222.7
Q ss_pred eeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEeccc----------CceeeEeeecCccEEEEEEeCCCC-eEEEEc
Q 017194 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRS----------KDVQLVTDVGNGPVTSLCFKSGNE-DIIYVS 77 (375)
Q Consensus 9 ~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~----------~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~ 77 (375)
..+.+|.+.|++++|+|+++.+||+++.||.|++|++.+ ...+..+.+|...|.+++|+|++. +|++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 445689999999999997568999999999999999987 567888899999999999999988 999999
Q ss_pred CCCeEEEEECCCCCcc----cccccccCCCcceeEEEEcC-CCCeEEEEeCCCcEEEEeCcCc---eeeeeEecCcccce
Q 017194 78 SGKEVKSFDVHMPASW----RPLESYNYNKEEINQIVCNP-KSSFLACADDGGDVKIIDIRQH---CLYKSLRAGHSSIC 149 (375)
Q Consensus 78 ~d~~i~iwd~~~~~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~v 149 (375)
.||.|++|++.++... .....+..|...|.+++|+| ++.+|++++.||.|++||++++ +.+..+. .|...|
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~v 280 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-AHTAEV 280 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-CCSSCE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-cCCCCe
Confidence 9999999999874322 22455667899999999999 6788999999999999999977 5677788 899999
Q ss_pred eEEEEeeCCCcEEEEeecCCeEEEeeCCC-CCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCC-CEEEEEe
Q 017194 150 SSVQFIPWKPWEVISGGLDSKLVMWDFSK-GRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTN-KICVVAK 227 (375)
Q Consensus 150 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~l~~~~ 227 (375)
++++|+|++++++++|+.||.|++||+++ .+++..+.. |...|.+++|+| ++ .+|++++
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~-------------h~~~v~~i~~sp------~~~~~l~s~~ 341 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-------------HKDEIFQVQWSP------HNETILASSG 341 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC-------------CSSCEEEEEECS------SCTTEEEEEE
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec-------------CCCCEEEEEECC------CCCCEEEEEe
Confidence 99999999987799999999999999998 456666653 468999999999 56 5799999
Q ss_pred cCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCc-
Q 017194 228 GDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGK- 306 (375)
Q Consensus 228 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~- 306 (375)
.||.|++||+........... .. .....++..+.+|...|.+++|+ |+++
T Consensus 342 ~d~~i~iwd~~~~~~~~~~~~-----------~~---------------~~~~~~~~~~~~h~~~v~~~~~~---p~~~~ 392 (430)
T 2xyi_A 342 TDRRLHVWDLSKIGEEQSTED-----------AE---------------DGPPELLFIHGGHTAKISDFSWN---PNEPW 392 (430)
T ss_dssp TTSCCEEEEGGGTTCCCCHHH-----------HH---------------HCCTTEEEECCCCSSCEEEEEEC---SSSTT
T ss_pred CCCcEEEEeCCCCccccCccc-----------cc---------------cCCcceEEEcCCCCCCceEEEEC---CCCCC
Confidence 999999999986321110000 00 00113455778899999999999 8998
Q ss_pred EEEEecCCCeEEEEeCCCc
Q 017194 307 YLISGGNDKLVKVWDCSRF 325 (375)
Q Consensus 307 ~l~s~~~dg~i~iwd~~~~ 325 (375)
+|++++.||.|++|++...
T Consensus 393 ~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 393 IICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEEEEETTSEEEEEEECHH
T ss_pred EEEEEECCCCEEEeEcccc
Confidence 8999999999999999874
No 93
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-39 Score=296.71 Aligned_cols=260 Identities=14% Similarity=0.188 Sum_probs=214.3
Q ss_pred CeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecc--cCceeeEeeecCccEEEEEEeCC--CCeEEEEcCCCeEE
Q 017194 8 PRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLR--SKDVQLVTDVGNGPVTSLCFKSG--NEDIIYVSSGKEVK 83 (375)
Q Consensus 8 ~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~--~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~d~~i~ 83 (375)
+..+.+|.++|++++|+|+ +++|++|+.||+|++||+. +++....+.+|..+|.+++|+|+ +++|++++.||.|+
T Consensus 2 ~~~l~gH~~~V~~l~~s~d-g~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYY-GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 80 (753)
T ss_dssp ------CCCCEEEECCCSS-SCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred eeecccCcceeEEEEECCC-CCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence 4568899999999999999 8999999999999999998 55678888999999999999988 99999999999999
Q ss_pred EEECCCCCcccccccccCCCcceeEEEEcCC--CCeEEEEeCCCcEEEEeCcCc--eeeeeEecCcccceeEEEEeeC--
Q 017194 84 SFDVHMPASWRPLESYNYNKEEINQIVCNPK--SSFLACADDGGDVKIIDIRQH--CLYKSLRAGHSSICSSVQFIPW-- 157 (375)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~v~~~~~~~~-- 157 (375)
+||+.+++ ...+..+..|...|.+++|+|+ ++++++|+.||.|++||++++ .....+. +|...|.+++|+|.
T Consensus 81 vwd~~~~~-~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~-~~~~~v~~l~~~p~~~ 158 (753)
T 3jro_A 81 IWKEENGR-WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID-AHAIGVNSASWAPATI 158 (753)
T ss_dssp EEEEETTE-EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEE-CCSSCEEEEEECCCC-
T ss_pred EEECCCCc-ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEee-cCCCceEEEEecCccc
Confidence 99998753 3355666778999999999999 999999999999999999877 3344566 89999999999994
Q ss_pred -----------CCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCC---CCEE
Q 017194 158 -----------KPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKT---NKIC 223 (375)
Q Consensus 158 -----------~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~l 223 (375)
+. .+++|+.||.|++||++++......... ...|...|.+++|+| + ++++
T Consensus 159 ~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~---------~~~h~~~V~~l~~sp------~~~~~~~l 222 (753)
T 3jro_A 159 EEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLEST---------LEGHSDWVRDVAWSP------TVLLRSYL 222 (753)
T ss_dssp --------CGGGC-CEEEEETTSCEEEEEEETTTTEEEEEEE---------ECCCSSCEEEEEECC------CCSSSEEE
T ss_pred ccccccccCCCCC-EEEEEECCCeEEEEeccCCcccceeeee---------ecCCCCcEEEEEecc------CCCCCCEE
Confidence 66 7999999999999999887543222110 001578899999999 7 8999
Q ss_pred EEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCC
Q 017194 224 VVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGE 303 (375)
Q Consensus 224 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 303 (375)
++++.||.|++||+.++.... .........|...|.+++|+ |
T Consensus 223 ~s~s~Dg~I~iwd~~~~~~~~-----------------------------------~~~~~~~~~~~~~v~~l~~s---p 264 (753)
T 3jro_A 223 ASVSQDRTCIIWTQDNEQGPW-----------------------------------KKTLLKEEKFPDVLWRASWS---L 264 (753)
T ss_dssp EEEESSSCEEEEEESSSSSCC-----------------------------------BCCBSSSSCCSSCCCCEEEC---T
T ss_pred EEEecCCEEEEecCCCCCCcc-----------------------------------eeEEeccCCCCCceEEEEEc---C
Confidence 999999999999998743211 01222445688899999999 9
Q ss_pred CCcEEEEecCCCeEEEEeCCC
Q 017194 304 RGKYLISGGNDKLVKVWDCSR 324 (375)
Q Consensus 304 ~~~~l~s~~~dg~i~iwd~~~ 324 (375)
+|++|++++.||.|++|++..
T Consensus 265 dg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 265 SGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp TTCCEEEECSSSCEECCBCCS
T ss_pred CCCEEEEEcCCCEEEEEecCC
Confidence 999999999999999999985
No 94
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=267.30 Aligned_cols=273 Identities=16% Similarity=0.192 Sum_probs=217.5
Q ss_pred ecCCCceeEEEEecCC--CCEEEEeCCCCcEEEEecccCc-eeeEeeecCccEEEEEE------eCCCCeEEEEcCCCeE
Q 017194 12 RGHKATATCCIASRDR--PGFVASSGEDGCICWFDLRSKD-VQLVTDVGNGPVTSLCF------KSGNEDIIYVSSGKEV 82 (375)
Q Consensus 12 ~~h~~~i~~~~~~~~~--~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~v~~l~~------~~~~~~l~~~~~d~~i 82 (375)
.+|.++|.+++|+|+. +++|++|+.||.|++||+.+++ .+..+..|...|.++.| +|++++|++++.|+.|
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i 141 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTV 141 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCE
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeE
Confidence 3799999999999984 5899999999999999999988 88889999999999955 6789999999999999
Q ss_pred EEEECCCCC-cccccccccCC-CcceeEEE----EcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEee
Q 017194 83 KSFDVHMPA-SWRPLESYNYN-KEEINQIV----CNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIP 156 (375)
Q Consensus 83 ~iwd~~~~~-~~~~~~~~~~~-~~~v~~~~----~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 156 (375)
++||+++++ ....+....++ ...+.+++ |+|+++++++++.||.|++||+++++..... .|...|.+++|+|
T Consensus 142 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~v~~~~~~~ 219 (357)
T 3i2n_A 142 KVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET--NIKNGVCSLEFDR 219 (357)
T ss_dssp EEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE--ECSSCEEEEEESC
T ss_pred EEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeec--CCCCceEEEEcCC
Confidence 999999765 23333322222 33788888 7889999999999999999999998876554 5889999999999
Q ss_pred ---CCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCC-EEEEEecCCcE
Q 017194 157 ---WKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNK-ICVVAKGDGVV 232 (375)
Q Consensus 157 ---~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~l~~~~~dg~i 232 (375)
++. .+++++.||.|++||+++++....+... ....|...|.+++|+| +++ ++++++.||.|
T Consensus 220 ~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~--------~~~~~~~~v~~~~~~~------~~~~~l~~~~~dg~i 284 (357)
T 3i2n_A 220 KDISMN-KLVATSLEGKFHVFDMRTQHPTKGFASV--------SEKAHKSTVWQVRHLP------QNRELFLTAGGAGGL 284 (357)
T ss_dssp SSSSCC-EEEEEESTTEEEEEEEEEEETTTEEEEE--------EEECCSSCEEEEEEET------TEEEEEEEEETTSEE
T ss_pred CCCCCC-EEEEECCCCeEEEEeCcCCCcccceeee--------ccCCCcCCEEEEEECC------CCCcEEEEEeCCCcE
Confidence 777 7999999999999999988776655410 0001568999999999 677 89999999999
Q ss_pred EEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEE-Ee
Q 017194 233 DVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLI-SG 311 (375)
Q Consensus 233 ~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~-s~ 311 (375)
++||++......... ++|..... ......+..+.+|...|.+++|+ |++++|+ ++
T Consensus 285 ~iwd~~~~~~~~~~~-------------~~g~~~~~--------~~~~~~~~~~~~~~~~v~~~~~s---~~~~~l~~s~ 340 (357)
T 3i2n_A 285 HLWKYEYPIQRSKKD-------------SEGIEMGV--------AGSVSLLQNVTLSTQPISSLDWS---PDKRGLCVCS 340 (357)
T ss_dssp EEEEEECCSCC--CC-------------TTSCCCCC--------CCEEEEEEEEECCSSCEEEEEEC---SSSTTEEEEE
T ss_pred EEeecCCCccccccc-------------CCCCcccc--------ccccceeeccccCCCCeeEEEEc---CCCCeEEEEe
Confidence 999998754332111 11111100 12345677888999999999999 9999998 89
Q ss_pred cCCCeEEEEeCCCc
Q 017194 312 GNDKLVKVWDCSRF 325 (375)
Q Consensus 312 ~~dg~i~iwd~~~~ 325 (375)
+.||.|++||+.+.
T Consensus 341 ~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 341 SFDQTVRVLIVTKL 354 (357)
T ss_dssp ETTSEEEEEEECC-
T ss_pred cCCCcEEEEECCCc
Confidence 99999999999886
No 95
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.5e-39 Score=276.15 Aligned_cols=268 Identities=13% Similarity=0.084 Sum_probs=206.8
Q ss_pred EeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeC
Q 017194 53 VTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDI 132 (375)
Q Consensus 53 ~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 132 (375)
....+..+|.+++|+|++++|++++.|+.|++||+.++. ...+..+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNG-WKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTE-EEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCc-eEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 345567899999999999999999999999999998652 2455667788999999999999999999999999999999
Q ss_pred cCce---eeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCc---ceEEecCCCCCCCCCCcccCCCcee
Q 017194 133 RQHC---LYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRP---NKIVNFGLPENNGNAGQCYNPAFVH 206 (375)
Q Consensus 133 ~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~ 206 (375)
.+++ ....+. .|...|.+++|+|+++ +|++++.|+.|++||+++++. ...+... |...|.
T Consensus 85 ~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~------------h~~~v~ 150 (377)
T 3dwl_C 85 RPDGTWKQTLVLL-RLNRAATFVRWSPNED-KFAVGSGARVISVCYFEQENDWWVSKHLKRP------------LRSTIL 150 (377)
T ss_dssp ----CCCCEEECC-CCSSCEEEEECCTTSS-CCEEEESSSCEEECCC-----CCCCEEECSS------------CCSCEE
T ss_pred CCCCceeeeeEec-ccCCceEEEEECCCCC-EEEEEecCCeEEEEEECCcccceeeeEeecc------------cCCCeE
Confidence 9876 556666 8999999999999998 799999999999999998773 5555542 468899
Q ss_pred EEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeee
Q 017194 207 AIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSV 286 (375)
Q Consensus 207 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~ 286 (375)
+++|+| ++++|++++.||.|++||+............ +.+.. ....+++..+
T Consensus 151 ~~~~~~------~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-----------~~~~~-----------~~~~~~~~~~ 202 (377)
T 3dwl_C 151 SLDWHP------NNVLLAAGCADRKAYVLSAYVRDVDAKPEAS-----------VWGSR-----------LPFNTVCAEY 202 (377)
T ss_dssp EEEECT------TSSEEEEEESSSCEEEEEECCSSCC-CCCSC-----------SSCSC-----------CCEEEEEECC
T ss_pred EEEEcC------CCCEEEEEeCCCEEEEEEEEecccCCCcccc-----------ccccc-----------cchhhhhhcc
Confidence 999999 7999999999999999999754321111000 00000 1123455566
Q ss_pred cCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCC
Q 017194 287 GGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTS 366 (375)
Q Consensus 287 ~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 366 (375)
+|...|.+++|+ |++++|++++.||.|++||+.+++... ..+..+.+|...|.+++|+| ++++|++++.|
T Consensus 203 -~~~~~v~~~~~s---p~~~~l~~~~~d~~i~iwd~~~~~~~~-----~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~ 272 (377)
T 3dwl_C 203 -PSGGWVHAVGFS---PSGNALAYAGHDSSVTIAYPSAPEQPP-----RALITVKLSQLPLRSLLWAN-ESAIVAAGYNY 272 (377)
T ss_dssp -CCSSSEEEEEEC---TTSSCEEEEETTTEEC-CEECSTTSCE-----EECCCEECSSSCEEEEEEEE-TTEEEEEESSS
T ss_pred -cCCceEEEEEEC---CCCCEEEEEeCCCcEEEEECCCCCCcc-----eeeEeecCCCCceEEEEEcC-CCCEEEEEcCC
Confidence 899999999999 999999999999999999999973100 11667788999999999999 99999999877
Q ss_pred CeEEEEec
Q 017194 367 KVVKVYSI 374 (375)
Q Consensus 367 g~v~iw~~ 374 (375)
+.+ +|+.
T Consensus 273 ~~~-~~~~ 279 (377)
T 3dwl_C 273 SPI-LLQG 279 (377)
T ss_dssp SEE-EECC
T ss_pred cEE-EEEe
Confidence 766 6653
No 96
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=6.2e-38 Score=271.67 Aligned_cols=297 Identities=17% Similarity=0.201 Sum_probs=232.6
Q ss_pred CceeEEEEecCCC---------CEEEEeCC----CCcEEEEecc--------------------------cCce-eeEee
Q 017194 16 ATATCCIASRDRP---------GFVASSGE----DGCICWFDLR--------------------------SKDV-QLVTD 55 (375)
Q Consensus 16 ~~i~~~~~~~~~~---------~~l~s~~~----d~~i~iw~~~--------------------------~~~~-~~~~~ 55 (375)
-+..++.|.|+.. .+++.|+. ...|.++++. +++. .....
T Consensus 46 wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 125 (430)
T 2xyi_A 46 WPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKI 125 (430)
T ss_dssp SCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEEE
T ss_pred CCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEEE
Confidence 4678889998731 35777654 3467777543 1111 23445
Q ss_pred ecCccEEEEEEeCC-CCeEEEEcCCCeEEEEECCCC-------CcccccccccCCCcceeEEEEcCCCC-eEEEEeCCCc
Q 017194 56 VGNGPVTSLCFKSG-NEDIIYVSSGKEVKSFDVHMP-------ASWRPLESYNYNKEEINQIVCNPKSS-FLACADDGGD 126 (375)
Q Consensus 56 ~~~~~v~~l~~~~~-~~~l~~~~~d~~i~iwd~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~ 126 (375)
.|...|++++|+|+ +.+|++++.+|.|++|++.+. .....+..+.+|...|.+++|+|++. +|++|+.||.
T Consensus 126 ~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 205 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHT 205 (430)
T ss_dssp EESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSC
T ss_pred cCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCe
Confidence 68999999999997 678999999999999999752 12455666778899999999999988 9999999999
Q ss_pred EEEEeCcCcee-------eeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCC---CcceEEecCCCCCCCCC
Q 017194 127 VKIIDIRQHCL-------YKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG---RPNKIVNFGLPENNGNA 196 (375)
Q Consensus 127 i~iwd~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~---~~~~~~~~~~~~~~~~~ 196 (375)
|++||+.++.. ...+. +|...|.+++|+|++..+|++++.|+.|++||++++ +.+..+. .
T Consensus 206 i~vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-~-------- 275 (430)
T 2xyi_A 206 ICLWDINATPKEHRVIDAKNIFT-GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-A-------- 275 (430)
T ss_dssp EEEEETTSCCBGGGEEECSEEEC-CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-C--------
T ss_pred EEEEeCCCCCCCCceeccceeec-CCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-c--------
Confidence 99999987322 45566 899999999999965558999999999999999987 4555554 2
Q ss_pred CcccCCCceeEEeecCCccccCCCC-EEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecC
Q 017194 197 GQCYNPAFVHAIAIPDADMLDKTNK-ICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQS 275 (375)
Q Consensus 197 ~~~~~~~~v~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~ 275 (375)
|...|++++|+| ++. ++++|+.||.|++||+++..
T Consensus 276 ----~~~~v~~i~~~p------~~~~~l~tg~~dg~v~vwd~~~~~---------------------------------- 311 (430)
T 2xyi_A 276 ----HTAEVNCLSFNP------YSEFILATGSADKTVALWDLRNLK---------------------------------- 311 (430)
T ss_dssp ----CSSCEEEEEECS------SCTTEEEEEETTSEEEEEETTCTT----------------------------------
T ss_pred ----CCCCeEEEEeCC------CCCCEEEEEeCCCeEEEEeCCCCC----------------------------------
Confidence 468899999999 565 79999999999999998632
Q ss_pred CcceeEeeeeecCCCccEEEEEEeecCCCCc-EEEEecCCCeEEEEeCCCceeeee-----cchhhhhhhhcccccceee
Q 017194 276 GGKRLHLDYSVGGHTAAASCVAFSMFGERGK-YLISGGNDKLVKVWDCSRFQGVQT-----SINNDLLIKNINLNKKVNW 349 (375)
Q Consensus 276 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~-----~~~~~~~~~~~~~~~~v~~ 349 (375)
..+..+..|...|.+++|+ |+++ +|++++.||.|++||+........ .....++....+|...|.+
T Consensus 312 -----~~~~~~~~h~~~v~~i~~s---p~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 383 (430)
T 2xyi_A 312 -----LKLHSFESHKDEIFQVQWS---PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 383 (430)
T ss_dssp -----SCSEEEECCSSCEEEEEEC---SSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEE
T ss_pred -----CCeEEeecCCCCEEEEEEC---CCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceE
Confidence 2334667899999999999 8884 799999999999999987321110 0111445566789999999
Q ss_pred eeecCCCCC-cEEEeeCCCeEEEEecC
Q 017194 350 LCTTPTESE-NLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 350 ~~~~~~~~~-~l~s~~~dg~v~iw~~~ 375 (375)
++|+| +++ +|++++.||.|++|+++
T Consensus 384 ~~~~p-~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 384 FSWNP-NEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp EEECS-SSTTEEEEEETTSEEEEEEEC
T ss_pred EEECC-CCCCEEEEEECCCCEEEeEcc
Confidence 99999 777 89999999999999974
No 97
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-38 Score=273.49 Aligned_cols=268 Identities=10% Similarity=0.057 Sum_probs=211.6
Q ss_pred cCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCc
Q 017194 13 GHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPAS 92 (375)
Q Consensus 13 ~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 92 (375)
.....|.+++|+|| |+++||++.|++|+ |...+ +.+.+|...|.+++|+|+| .++.+.+|+.+ .
T Consensus 13 ~~~~~v~sv~~SpD-G~~iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~---~ 76 (588)
T 2j04_A 13 EFEDWKNNLTWARD-GTLYLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLE-------FENKLDFELAQ---Q 76 (588)
T ss_dssp CCSSSSCCEEECTT-SCEEEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCC---S
T ss_pred HhhccEEEEEECCC-CCEEEEEcCCceee--ccccc---ceecCCCccEEEEEECCCC-------CcceEEEEeCC---C
Confidence 45688999999999 99999999999999 65444 4457899999999999998 45555555543 2
Q ss_pred ccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCccc-----ceeEEEEeeCCCcEEEEeec
Q 017194 93 WRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSS-----ICSSVQFIPWKPWEVISGGL 167 (375)
Q Consensus 93 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~~~~~ 167 (375)
...+ .+ .|...|.+++|+|+|++||+++.||.|++||.+. .+..+. |.. .+.+++|+|+|+ +|++|+.
T Consensus 77 ~~~~-~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~--~~~~~~~~sv~svafSPDG~-~LAsgs~ 149 (588)
T 2j04_A 77 NGLL-NS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD--SKGNLSSRTYHCFEWNPIES-SIVVGNE 149 (588)
T ss_dssp SCSS-TT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC--CSSCSTTTCEEEEEECSSSS-CEEEEET
T ss_pred ceEe-ec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc--CCCccccccEEEEEEcCCCC-EEEEEcC
Confidence 2222 22 2368899999999999999999999999999544 444444 443 599999999999 7999999
Q ss_pred CCeEEEeeCCCCCc-------ceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCc
Q 017194 168 DSKLVMWDFSKGRP-------NKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESE 240 (375)
Q Consensus 168 d~~i~~wd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 240 (375)
||+|++||+.+++. +..+..+. ..|...|.+++|+| ++ +++++.|+.|++||+.+.
T Consensus 150 DGtVkIWd~~~~~l~~~~~i~l~ti~~~~---------~gh~~~V~sVawSP------dg--Laass~D~tVrlWd~~~~ 212 (588)
T 2j04_A 150 DGELQFFSIRKNSENTPEFYFESSIRLSD---------AGSKDWVTHIVWYE------DV--LVAALSNNSVFSMTVSAS 212 (588)
T ss_dssp TSEEEEEECCCCTTTCCCCEEEEEEECSC---------TTCCCCEEEEEEET------TE--EEEEETTCCEEEECCCSS
T ss_pred CCEEEEEECCCCccccccceeeeeeeccc---------ccccccEEEEEEcC------Cc--EEEEeCCCeEEEEECCCC
Confidence 99999999998753 35554220 01567999999999 67 888999999999999864
Q ss_pred ceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeee-cCCCccEEEEEEeecCCCCcEEEEecCCCeEEE
Q 017194 241 LNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSV-GGHTAAASCVAFSMFGERGKYLISGGNDKLVKV 319 (375)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~i 319 (375)
... ....++ .+|...|.+++|+ |++||+++ ++.|++
T Consensus 213 ~~~-------------------------------------~~~~tL~~~h~~~V~svaFs-----g~~LASa~-~~tIkL 249 (588)
T 2j04_A 213 SHQ-------------------------------------PVSRMIQNASRRKITDLKIV-----DYKVVLTC-PGYVHK 249 (588)
T ss_dssp SSC-------------------------------------CCEEEEECCCSSCCCCEEEE-----TTEEEEEC-SSEEEE
T ss_pred ccc-------------------------------------cceeeecccccCcEEEEEEE-----CCEEEEEe-CCeEEE
Confidence 210 112245 4788899999997 47899887 699999
Q ss_pred EeCCCceeeeecchhhhhhhhcccccceeeeee--cCCCCCcEEEeeCCCeEEEEec
Q 017194 320 WDCSRFQGVQTSINNDLLIKNINLNKKVNWLCT--TPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
||+.+++ ......+|...+..++| +| ++..|++++.||+ ++|.+
T Consensus 250 Wd~~~~~---------~~~~~~gh~~~V~~va~~~s~-d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 250 IDLKNYS---------ISSLKTGSLENFHIIPLNHEK-ESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp EETTTTE---------EEEEECSCCSCCCEEEETTCS-SCEEEEECSSCEE-EEEES
T ss_pred EECCCCe---------EEEEEcCCCceEEEEEeeeCC-CCCEEEEEcCCCC-EEEee
Confidence 9999873 32233389999999999 88 9999999999999 99986
No 98
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-39 Score=280.65 Aligned_cols=283 Identities=13% Similarity=0.184 Sum_probs=218.2
Q ss_pred EecCCCCEEEEeCCCCcEEEEecccCceeeEe-eecCccEEEEEEeC-CCCeEEEEcCCCeEEEEECCC---CCcccccc
Q 017194 23 ASRDRPGFVASSGEDGCICWFDLRSKDVQLVT-DVGNGPVTSLCFKS-GNEDIIYVSSGKEVKSFDVHM---PASWRPLE 97 (375)
Q Consensus 23 ~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~-~~~~~~v~~l~~~~-~~~~l~~~~~d~~i~iwd~~~---~~~~~~~~ 97 (375)
|+|+ ++.+++++ .|+ .+++.+..+ .+|...|++++|+| ++++|++++.|+.|++||+.+ +.......
T Consensus 35 f~~~-~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~ 106 (437)
T 3gre_A 35 FGPI-QEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSL 106 (437)
T ss_dssp GCCC-CCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSE
T ss_pred cCCc-cccccccc------ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceee
Confidence 4555 55666554 487 457778888 88999999999999 999999999999999999875 33222222
Q ss_pred cccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCc---CceeeeeEecC------------cccceeEEE--EeeCCCc
Q 017194 98 SYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIR---QHCLYKSLRAG------------HSSICSSVQ--FIPWKPW 160 (375)
Q Consensus 98 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~~------------~~~~v~~~~--~~~~~~~ 160 (375)
.+ .|...|.+++|+|++++|++++.||.|++||++ +++....+. . +...+.++. +++++.
T Consensus 107 ~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~- 183 (437)
T 3gre_A 107 TY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLN-CECIRKINLKNFGKNEYAVRMRAFVNEEKS- 183 (437)
T ss_dssp EE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEE-EEEEEEEEGGGGSSCCCEEEEEEEECSSCE-
T ss_pred ec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccc-cceeEEEEccCcccccCceEEEEEEcCCCC-
Confidence 22 478999999999999999999999999999995 444444333 2 344556665 446676
Q ss_pred EEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCc
Q 017194 161 EVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESE 240 (375)
Q Consensus 161 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 240 (375)
++++++.|+.|++||+++++.+..+.... |...|.+++|+| ++++|++|+.||.|++||++++
T Consensus 184 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-----------h~~~v~~~~~s~------~~~~l~s~~~dg~i~iwd~~~~ 246 (437)
T 3gre_A 184 LLVALTNLSRVIIFDIRTLERLQIIENSP-----------RHGAVSSICIDE------ECCVLILGTTRGIIDIWDIRFN 246 (437)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCG-----------GGCCEEEEEECT------TSCEEEEEETTSCEEEEETTTT
T ss_pred EEEEEeCCCeEEEEeCCCCeeeEEEccCC-----------CCCceEEEEECC------CCCEEEEEcCCCeEEEEEcCCc
Confidence 89999999999999999999988887420 357899999999 7999999999999999999974
Q ss_pred ceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeec-CCCccEEEEEEee-cCCCCcEEEEecCCCeEE
Q 017194 241 LNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVG-GHTAAASCVAFSM-FGERGKYLISGGNDKLVK 318 (375)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~-~~~~~~~l~s~~~dg~i~ 318 (375)
+++..+. .|..+|.+++|+| +.+++.+|++|+.||.|+
T Consensus 247 ----------------------------------------~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~ 286 (437)
T 3gre_A 247 ----------------------------------------VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLT 286 (437)
T ss_dssp ----------------------------------------EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEE
T ss_pred ----------------------------------------cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEE
Confidence 3334443 6778999997763 236788999999999999
Q ss_pred EEeCCCceeeeecchh----h-hhh----------hhcc--cccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 319 VWDCSRFQGVQTSINN----D-LLI----------KNIN--LNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 319 iwd~~~~~~~~~~~~~----~-~~~----------~~~~--~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
+||+.+++........ . ... .+.+ |...|.+++|+ ++++|++++.||.|++||++
T Consensus 287 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~--~~~~l~s~~~d~~i~~wd~~ 358 (437)
T 3gre_A 287 IWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS--NDKILLTDEATSSIVMFSLN 358 (437)
T ss_dssp EEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE--TTEEEEEEGGGTEEEEEETT
T ss_pred EEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC--CceEEEecCCCCeEEEEECC
Confidence 9999988654221100 0 000 1223 88889999998 45899999999999999974
No 99
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-37 Score=271.71 Aligned_cols=310 Identities=17% Similarity=0.102 Sum_probs=227.7
Q ss_pred CCceeEEEEecCCCCEEEEeCCCCcEEEEecccCc---eeeEeee-----------------------------------
Q 017194 15 KATATCCIASRDRPGFVASSGEDGCICWFDLRSKD---VQLVTDV----------------------------------- 56 (375)
Q Consensus 15 ~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~---~~~~~~~----------------------------------- 56 (375)
..++.+++|+|+ +++|+++ .++.|++||+.+++ .+..+..
T Consensus 4 ~~p~~~v~~s~d-g~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T 2vdu_B 4 IHPLQNLLTSRD-GSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKG 81 (450)
T ss_dssp ECCCCEEEECSS-SSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC---------------------------------
T ss_pred cccEEEEEecCC-CCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcC
Confidence 358999999999 7766665 46799999999998 5555543
Q ss_pred -------------------cCccEEEEEEeCCCCeE-EEEcCCCeEEEEECC--CCCcccccccccCCCcceeEEEEcCC
Q 017194 57 -------------------GNGPVTSLCFKSGNEDI-IYVSSGKEVKSFDVH--MPASWRPLESYNYNKEEINQIVCNPK 114 (375)
Q Consensus 57 -------------------~~~~v~~l~~~~~~~~l-~~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~v~~~~~~~~ 114 (375)
|...|.+++|+|++++| ++++.|+.|++||+. +++....+.. ..|...|.+++|+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~ 160 (450)
T 2vdu_B 82 DSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKR-FCFSKRPNAISIAED 160 (450)
T ss_dssp ------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE-EECSSCEEEEEECTT
T ss_pred ccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeec-ccCCCCceEEEEcCC
Confidence 23369999999999996 889899999999998 6654444432 245688999999999
Q ss_pred CCeEEEEeCCCcEEEEeCcCceeee----eEecCcccceeEEEEeeC---CCcEEEEeecCCeEEEeeCCCCCcceEEec
Q 017194 115 SSFLACADDGGDVKIIDIRQHCLYK----SLRAGHSSICSSVQFIPW---KPWEVISGGLDSKLVMWDFSKGRPNKIVNF 187 (375)
Q Consensus 115 ~~~l~~~~~dg~i~iwd~~~~~~~~----~~~~~~~~~v~~~~~~~~---~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 187 (375)
+++|++++.+|.|++|++.+++... .+. +|...|.+++|+|+ +. +|++++.|+.|++||+++++.+..+..
T Consensus 161 ~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~ 238 (450)
T 2vdu_B 161 DTTVIIADKFGDVYSIDINSIPEEKFTQEPIL-GHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQCFIVDKWLF 238 (450)
T ss_dssp SSEEEEEETTSEEEEEETTSCCCSSCCCCCSE-ECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESCTTCEEEECC
T ss_pred CCEEEEEeCCCcEEEEecCCcccccccceeee-cccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCCCceeeeeec
Confidence 9999999999999999998876554 677 89999999999999 77 799999999999999999988877554
Q ss_pred CCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeeccccccee
Q 017194 188 GLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDA 267 (375)
Q Consensus 188 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~ 267 (375)
+ |...|.+++|+ . +++|++++.|+.|++||+.+++.......... ...+.+.....
T Consensus 239 ~------------h~~~v~~~~~s-d------~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~--~~~~~~~~~~~--- 294 (450)
T 2vdu_B 239 G------------HKHFVSSICCG-K------DYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSL--IKPYLNDQHLA--- 294 (450)
T ss_dssp C------------CSSCEEEEEEC-S------TTEEEEEESSSEEEEEETTTCCEEEEEECHHH--HGGGCCTTSBC---
T ss_pred C------------CCCceEEEEEC-C------CCEEEEEeCCCeEEEEECCCCcEeeeecchhh--hhhhhhhcccc---
Confidence 4 67899999997 3 99999999999999999998765433321100 00000000000
Q ss_pred eeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEec-CCCeEEEEeC--CCceeeeecchhhhhhhhcccc
Q 017194 268 EMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGG-NDKLVKVWDC--SRFQGVQTSINNDLLIKNINLN 344 (375)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~-~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~ 344 (375)
.... ...........|.+++|+ |++++|++++ .|+.|++|++ ...... ..+..+..|
T Consensus 295 ---------~~~~-~~~~~~~~~~~v~~i~~~---~~~~~l~~~~~~d~~i~iw~~~~~~~~~l------~~~~~~~~~- 354 (450)
T 2vdu_B 295 ---------PPRF-QNENNDIIEFAVSKIIKS---KNLPFVAFFVEATKCIIILEMSEKQKGDL------ALKQIITFP- 354 (450)
T ss_dssp --------------------CBCCCEEEEEEC---SSSSEEEEEETTCSEEEEEEECSSSTTCE------EEEEEEECS-
T ss_pred ---------cccc-cccccccceEEEEEEEEe---CCCCEEEEEECCCCeEEEEEeccCCCCce------eeccEeccC-
Confidence 0000 000111335678999999 9999999998 8999999999 433111 233344556
Q ss_pred cceeeeeecCCCCCcEEEeeC------CCeEEEEec
Q 017194 345 KKVNWLCTTPTESENLVVCDT------SKVVKVYSI 374 (375)
Q Consensus 345 ~~v~~~~~~~~~~~~l~s~~~------dg~v~iw~~ 374 (375)
+.|.+++|+| ++.++++++. +..|.+|.+
T Consensus 355 ~~v~~~~~~~-~~~~v~~~~~~~~~~~~~~i~v~~~ 389 (450)
T 2vdu_B 355 YNVISLSAHN-DEFQVTLDNKESSGVQKNFAKFIEY 389 (450)
T ss_dssp SCEEEEEEET-TEEEEEECCTTCCSSCCCSEEEEEE
T ss_pred CceEEEEecC-CcEEEEEecccCCCCCCcceEEEEE
Confidence 8899999999 6543443333 456888865
No 100
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.3e-37 Score=260.12 Aligned_cols=290 Identities=8% Similarity=0.074 Sum_probs=210.7
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeE-EEEcCCCeE
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDI-IYVSSGKEV 82 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~~~~~d~~i 82 (375)
+...+.++.+|.+.|++++|+|+ +++|++|+.++ ++||++++++....... ..+..+++.++++.+ ++++.|++|
T Consensus 8 ~~~~~~~~~~h~~~V~~v~fs~d-g~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v 83 (355)
T 3vu4_A 8 TRNPIVPENHVSNPVTDYEFNQD-QSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVV 83 (355)
T ss_dssp -----------CCCCCEEEECTT-SSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEE
T ss_pred ccCCccccccCCCceEEEEECCC-CCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCccEE
Confidence 34456677899999999999999 89999998775 78999988766554432 357888898888877 456778999
Q ss_pred EEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCc-eeeeeEecCcccceeEEEEeeCCCcE
Q 017194 83 KSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQH-CLYKSLRAGHSSICSSVQFIPWKPWE 161 (375)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~ 161 (375)
++||+.+++....+. +...|.++.++++. ++++ .++.|++||+.++ +.+..+. . +...+++++ . .
T Consensus 84 ~iWd~~~~~~~~~~~----~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~-~---~~~~~~~s~--~-~ 149 (355)
T 3vu4_A 84 HIWDDVKKQDVSRIK----VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDI-R---FGGVCEFSN--G-L 149 (355)
T ss_dssp EEEETTTTEEEEEEE----CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCE-E---EEEEEEEET--T-E
T ss_pred EEEECCCCcEEEEEE----CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEec-c---CCceEEEEc--c-E
Confidence 999999876544433 36689999998864 4444 4789999999988 7777776 3 445566777 3 4
Q ss_pred EEE--eecCCeEEEeeCCCCCc----------------ceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEE
Q 017194 162 VIS--GGLDSKLVMWDFSKGRP----------------NKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKIC 223 (375)
Q Consensus 162 l~~--~~~d~~i~~wd~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l 223 (375)
++. |+.||.|++||+++++. +..+. + |...|.+++|+| ++++|
T Consensus 150 la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~-~------------h~~~v~~~~~s~------~g~~l 210 (355)
T 3vu4_A 150 LVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK-A------------HTNPIKMVRLNR------KSDMV 210 (355)
T ss_dssp EEEEESSCTTCEEEEECCC------------------CCEEEC-C------------CSSCEEEEEECT------TSSEE
T ss_pred EEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE-c------------cCCceEEEEECC------CCCEE
Confidence 555 68999999999997651 33333 2 678999999999 89999
Q ss_pred EEEecCCc-EEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeec-C-CCccEEEEEEee
Q 017194 224 VVAKGDGV-VDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVG-G-HTAAASCVAFSM 300 (375)
Q Consensus 224 ~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~s~ 300 (375)
++|+.||+ |++||++++ +++..+. + |...|.+++|+
T Consensus 211 ~s~s~d~~~v~iwd~~~~----------------------------------------~~~~~~~~g~h~~~v~~~~~s- 249 (355)
T 3vu4_A 211 ATCSQDGTIIRVFKTEDG----------------------------------------VLVREFRRGLDRADVVDMKWS- 249 (355)
T ss_dssp EEEETTCSEEEEEETTTC----------------------------------------CEEEEEECTTCCSCEEEEEEC-
T ss_pred EEEeCCCCEEEEEECCCC----------------------------------------cEEEEEEcCCCCCcEEEEEEC-
Confidence 99999998 999999975 3334555 4 89999999999
Q ss_pred cCCCCcEEEEecCCCeEEEEeCCCceeeeecchhh-hh-------------hhhcccccceeeeeecCCCCCcEEEeeCC
Q 017194 301 FGERGKYLISGGNDKLVKVWDCSRFQGVQTSINND-LL-------------IKNINLNKKVNWLCTTPTESENLVVCDTS 366 (375)
Q Consensus 301 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~-------------~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 366 (375)
|++++|++++.|+.|++||+..........-.. .. ............++|++ ++++|++++.|
T Consensus 250 --~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-d~~~l~~~~~d 326 (355)
T 3vu4_A 250 --TDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWIS-ESSLVVVWPHT 326 (355)
T ss_dssp --TTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESS-SSEEEEEETTT
T ss_pred --CCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeC-CCCEEEEEeCC
Confidence 999999999999999999998753211000000 00 00011122346689999 99999999999
Q ss_pred CeEEEEec
Q 017194 367 KVVKVYSI 374 (375)
Q Consensus 367 g~v~iw~~ 374 (375)
|.+++|++
T Consensus 327 g~~~~~~~ 334 (355)
T 3vu4_A 327 RMIETFKV 334 (355)
T ss_dssp TEEEEEEE
T ss_pred CeEEEEEE
Confidence 99999986
No 101
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-38 Score=289.01 Aligned_cols=267 Identities=17% Similarity=0.213 Sum_probs=216.9
Q ss_pred eeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCC--CCeEEEEeCCCcEE
Q 017194 51 QLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPK--SSFLACADDGGDVK 128 (375)
Q Consensus 51 ~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~ 128 (375)
+..+.+|.++|++++|+|++++|++++.||.|++||+..+ ....+..+.+|...|.+++|+|+ +++|++|+.||.|+
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~-~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 80 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETT-EEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCC-CCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence 3467889999999999999999999999999999998743 24566677889999999999988 99999999999999
Q ss_pred EEeCcCce--eeeeEecCcccceeEEEEeeC--CCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCc
Q 017194 129 IIDIRQHC--LYKSLRAGHSSICSSVQFIPW--KPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAF 204 (375)
Q Consensus 129 iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (375)
+||+.+++ .+..+. +|...|.+++|+|+ +. .+++++.||.|++||++++......... .+...
T Consensus 81 vwd~~~~~~~~~~~~~-~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~~~~~~~-----------~~~~~ 147 (753)
T 3jro_A 81 IWKEENGRWSQIAVHA-VHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSPIIID-----------AHAIG 147 (753)
T ss_dssp EEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSCCCCEEEE-----------CCSSC
T ss_pred EEECCCCccccccccc-CCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCCcceeEee-----------cCCCc
Confidence 99999886 667777 89999999999999 77 8999999999999999987443322211 15688
Q ss_pred eeEEeecCCc-------cccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCc
Q 017194 205 VHAIAIPDAD-------MLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGG 277 (375)
Q Consensus 205 v~~~~~~~~~-------~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~ 277 (375)
|.+++|+|.. ...+++.++++|+.||.|++||++++.
T Consensus 148 v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~------------------------------------ 191 (753)
T 3jro_A 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA------------------------------------ 191 (753)
T ss_dssp EEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTT------------------------------------
T ss_pred eEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCc------------------------------------
Confidence 9999999820 001138899999999999999998642
Q ss_pred ceeEeeeeecCCCccEEEEEEeecCCC---CcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecC
Q 017194 278 KRLHLDYSVGGHTAAASCVAFSMFGER---GKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTP 354 (375)
Q Consensus 278 ~~~~~~~~~~~~~~~v~~~~~s~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 354 (375)
........+.+|...|.+++|+ |+ +++|++++.||.|++||+.+++... .........|...|.+++|+|
T Consensus 192 ~~~~~~~~~~~h~~~V~~l~~s---p~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~----~~~~~~~~~~~~~v~~l~~sp 264 (753)
T 3jro_A 192 QTYVLESTLEGHSDWVRDVAWS---PTVLLRSYLASVSQDRTCIIWTQDNEQGPW----KKTLLKEEKFPDVLWRASWSL 264 (753)
T ss_dssp TEEEEEEEECCCSSCEEEEEEC---CCCSSSEEEEEEESSSCEEEEEESSSSSCC----BCCBSSSSCCSSCCCCEEECT
T ss_pred ccceeeeeecCCCCcEEEEEec---cCCCCCCEEEEEecCCEEEEecCCCCCCcc----eeEEeccCCCCCceEEEEEcC
Confidence 2234556788999999999999 88 8999999999999999999863110 013334456889999999999
Q ss_pred CCCCcEEEeeCCCeEEEEecC
Q 017194 355 TESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 355 ~~~~~l~s~~~dg~v~iw~~~ 375 (375)
++++|++++.||.|++|+++
T Consensus 265 -dg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 265 -SGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp -TTCCEEEECSSSCEECCBCC
T ss_pred -CCCEEEEEcCCCEEEEEecC
Confidence 99999999999999999974
No 102
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=261.27 Aligned_cols=288 Identities=16% Similarity=0.172 Sum_probs=202.8
Q ss_pred cCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCC---CeEEEEcCCCeEEEEECCC
Q 017194 13 GHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGN---EDIIYVSSGKEVKSFDVHM 89 (375)
Q Consensus 13 ~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~---~~l~~~~~d~~i~iwd~~~ 89 (375)
+|...|.+++|+|+++.+|++++.||.|++||+.+++....+. +...+.++.|+|.+ .++++++.++.|++||+++
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 6999999999999658899999999999999999998887776 78899999998854 4899999999999999987
Q ss_pred CCcccccccccCCCcceeEEEEcCCCCe-EEEEeCCCcEEEEeCcCce-eeeeE---------------ecCcccceeEE
Q 017194 90 PASWRPLESYNYNKEEINQIVCNPKSSF-LACADDGGDVKIIDIRQHC-LYKSL---------------RAGHSSICSSV 152 (375)
Q Consensus 90 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~-~~~~~---------------~~~~~~~v~~~ 152 (375)
++ .+..+..|...|.+++|+|++++ +++++.||.|++||++++. .+..+ . .|...|.++
T Consensus 176 ~~---~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~ 251 (408)
T 4a11_B 176 GS---CSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANT-AHNGKVNGL 251 (408)
T ss_dssp SC---CCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSC-SCSSCEEEE
T ss_pred cc---eeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccc-cccCceeEE
Confidence 54 44556678899999999999984 8899999999999998664 33333 4 688999999
Q ss_pred EEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcE
Q 017194 153 QFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVV 232 (375)
Q Consensus 153 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i 232 (375)
+|+|+++ +|++++.|+.|++||+++++........... ............. .+..+++++.++.|
T Consensus 252 ~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-------~~~~~~~~~~~~~i 316 (408)
T 4a11_B 252 CFTSDGL-HLLTVGTDNRMRLWNSSNGENTLVNYGKVCN-------NSKKGLKFTVSCG-------CSSEFVFVPYGSTI 316 (408)
T ss_dssp EECTTSS-EEEEEETTSCEEEEETTTCCBCCCCCCCCCC-------CCSSCCCCEECCS-------SSSCEEEEEETTEE
T ss_pred EEcCCCC-EEEEecCCCeEEEEECCCCccceeccccccc-------cccccceeEEecC-------CCceEEEEecCCEE
Confidence 9999998 7999999999999999988765443311000 0001111122222 46677788889999
Q ss_pred EEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEec
Q 017194 233 DVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGG 312 (375)
Q Consensus 233 ~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~ 312 (375)
++||+.++ +.+..+.+|...|.+++|+ |++++|++++
T Consensus 317 ~v~d~~~~----------------------------------------~~~~~~~~~~~~v~~~~~s---~~~~~l~s~~ 353 (408)
T 4a11_B 317 AVYTVYSG----------------------------------------EQITMLKGHYKTVDCCVFQ---SNFQELYSGS 353 (408)
T ss_dssp EEEETTTC----------------------------------------CEEEEECCCSSCEEEEEEE---TTTTEEEEEE
T ss_pred EEEECcCC----------------------------------------cceeeeccCCCeEEEEEEc---CCCCEEEEEC
Confidence 99999874 3445778899999999999 9999999999
Q ss_pred CCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 313 NDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 313 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
.||.|++||+.+.+ .+.....+. ....+.+.....+.+++.|+.+++|+.+
T Consensus 354 ~dg~i~iw~~~~~~---------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 354 RDCNILAWVPSLYE---------PVPDDDETT---TKSQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp TTSCEEEEEECC---------------------------------------------------
T ss_pred CCCeEEEEeCCCCC---------ccCCCCceE---eccccccccceeecccCccCceeecCCc
Confidence 99999999999984 332222221 1223444344566677889999999853
No 103
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.1e-37 Score=263.70 Aligned_cols=255 Identities=11% Similarity=0.119 Sum_probs=204.3
Q ss_pred ccCceeeEeeecCccEEEEEEeCCC-CeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcC-CCCeEEEEeC
Q 017194 46 RSKDVQLVTDVGNGPVTSLCFKSGN-EDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNP-KSSFLACADD 123 (375)
Q Consensus 46 ~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 123 (375)
.+.+....+.+|...|.+++|+|++ ++|++++.|+.|++||+.+++....+ ...+|...|.+++|+| ++++|++++.
T Consensus 61 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~s~~~ 139 (383)
T 3ei3_B 61 KSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFI-QGMGPGDAITGMKFNQFNTNQLFVSSI 139 (383)
T ss_dssp TTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEE-CCCSTTCBEEEEEEETTEEEEEEEEET
T ss_pred cccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceee-ecCCcCCceeEEEeCCCCCCEEEEEeC
Confidence 4455567788899999999999999 89999999999999999976543322 3346889999999999 7799999999
Q ss_pred CCcEEEEeCcCceeeeeEec--CcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccC
Q 017194 124 GGDVKIIDIRQHCLYKSLRA--GHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYN 201 (375)
Q Consensus 124 dg~i~iwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (375)
|+.|++||+++ ..+..+.. .|...|.+++|+|+++ +|++++.|+.|++||++ ++.+..+.. |
T Consensus 140 d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~-~~~~~~~~~-------------h 203 (383)
T 3ei3_B 140 RGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLD-GHEIFKEKL-------------H 203 (383)
T ss_dssp TTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETT-SCEEEEEEC-------------S
T ss_pred CCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECC-CCEEEEecc-------------C
Confidence 99999999985 44555541 3347899999999998 79999999999999994 666776663 4
Q ss_pred CCceeEEeecCCccccCCCC-EEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCccee
Q 017194 202 PAFVHAIAIPDADMLDKTNK-ICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRL 280 (375)
Q Consensus 202 ~~~v~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~ 280 (375)
...|.+++|+| +++ ++++++.|+.|++||+++.... .
T Consensus 204 ~~~v~~~~~~~------~~~~~l~s~~~d~~i~iwd~~~~~~~------------------------------------~ 241 (383)
T 3ei3_B 204 KAKVTHAEFNP------RCDWLMATSSVDATVKLWDLRNIKDK------------------------------------N 241 (383)
T ss_dssp SSCEEEEEECS------SCTTEEEEEETTSEEEEEEGGGCCST------------------------------------T
T ss_pred CCcEEEEEECC------CCCCEEEEEeCCCEEEEEeCCCCCcc------------------------------------c
Confidence 68999999999 677 9999999999999999863210 1
Q ss_pred EeeeeecCCCccEEEEEEeecCC-CCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhccc----------------
Q 017194 281 HLDYSVGGHTAAASCVAFSMFGE-RGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINL---------------- 343 (375)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~s~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~---------------- 343 (375)
.++..+ +|...|.+++|+ | ++++|++++.|+.|++||+.+++. ...+.+|
T Consensus 242 ~~~~~~-~~~~~v~~~~~s---~~~~~~l~~~~~d~~i~iwd~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 308 (383)
T 3ei3_B 242 SYIAEM-PHEKPVNAAYFN---PTDSTKLLTTDQRNEIRVYSSYDWSK---------PDQIIIHPHRQFQHLTPIKATWH 308 (383)
T ss_dssp CEEEEE-ECSSCEEEEEEC---TTTSCEEEEEESSSEEEEEETTBTTS---------CSEEEECCBCCCTTSCCCCCEEC
T ss_pred ceEEEe-cCCCceEEEEEc---CCCCCEEEEEcCCCcEEEEECCCCcc---------ccccccccccccccccceEEecc
Confidence 222233 588999999999 8 999999999999999999998743 2222222
Q ss_pred -ccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 344 -NKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 344 -~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
.+.+..++++| ++++ +++.||.|++||++
T Consensus 309 p~~~~~~~~~s~-dg~~--s~s~d~~i~iwd~~ 338 (383)
T 3ei3_B 309 PMYDLIVAGRYP-DDQL--LLNDKRTIDIYDAN 338 (383)
T ss_dssp SSSSEEEEECBC-CTTT--CTTCCCCEEEEETT
T ss_pred CCCCceEEEecC-Cccc--ccCCCCeEEEEecC
Confidence 23455577777 7776 88899999999974
No 104
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.3e-38 Score=262.68 Aligned_cols=271 Identities=13% Similarity=0.081 Sum_probs=206.3
Q ss_pred EecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCC------ccccc
Q 017194 23 ASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPA------SWRPL 96 (375)
Q Consensus 23 ~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~------~~~~~ 96 (375)
+.++ +.+|++|+.||+|++||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+..... ....+
T Consensus 44 ~~~d-~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 44 MYYD-KWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp SSEE-EEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred hcCC-CCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 3345 6889999999999999999999888776 467888889987 9999999999999876321 11112
Q ss_pred ccc-cCCCcceeEEEEcC--CCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEE
Q 017194 97 ESY-NYNKEEINQIVCNP--KSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVM 173 (375)
Q Consensus 97 ~~~-~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~ 173 (375)
..+ ..|...|.+++|+| +++++++++.||.|++||+++++.+..+...|...+.+++|+|++. +|++|+.||.|++
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~-~lasg~~dg~i~i 196 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSL-LLALYSPDGILDV 196 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSC-EEEEECTTSCEEE
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCC-EEEEEcCCCEEEE
Confidence 222 24568899999999 9999999999999999999999887766424566899999999998 8999999999999
Q ss_pred eeCCCCCcc-eEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCC
Q 017194 174 WDFSKGRPN-KIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKP 252 (375)
Q Consensus 174 wd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 252 (375)
||+++++.. ..+... |...|.+++|+| ++.+|++++ ++.|++||+++.......
T Consensus 197 wd~~~~~~~~~~~~~~------------h~~~v~~l~fs~------~g~~l~s~~-~~~v~iwd~~~~~~~~~~------ 251 (343)
T 3lrv_A 197 YNLSSPDQASSRFPVD------------EEAKIKEVKFAD------NGYWMVVEC-DQTVVCFDLRKDVGTLAY------ 251 (343)
T ss_dssp EESSCTTSCCEECCCC------------TTSCEEEEEECT------TSSEEEEEE-SSBEEEEETTSSTTCBSS------
T ss_pred EECCCCCCCccEEecc------------CCCCEEEEEEeC------CCCEEEEEe-CCeEEEEEcCCCCcceee------
Confidence 999999877 666643 568999999999 799999999 559999999975322111
Q ss_pred CCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccE--EEEEEeecCCCCcEEEEecC-CCeEEEEeCCCceeee
Q 017194 253 LKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAA--SCVAFSMFGERGKYLISGGN-DKLVKVWDCSRFQGVQ 329 (375)
Q Consensus 253 ~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~s~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~ 329 (375)
..+..|...+ .+++|+ |+|++|++++. |+.|++|++......
T Consensus 252 -------------------------------~~~~~~~~~~~~~~~~~~---~~g~~l~~~s~~d~~i~v~~~~~~~~~- 296 (343)
T 3lrv_A 252 -------------------------------PTYTIPEFKTGTVTYDID---DSGKNMIAYSNESNSLTIYKFDKKTKN- 296 (343)
T ss_dssp -------------------------------CCCBC-----CCEEEEEC---TTSSEEEEEETTTTEEEEEEECTTTCS-
T ss_pred -------------------------------cccccccccccceEEEEC---CCCCEEEEecCCCCcEEEEEEcccccc-
Confidence 1122232333 469999 99999999888 999999999765311
Q ss_pred ecchhhhhhhhcccccceeeeeecC--CCCCcEEEeeCCCeEEEE
Q 017194 330 TSINNDLLIKNINLNKKVNWLCTTP--TESENLVVCDTSKVVKVY 372 (375)
Q Consensus 330 ~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~s~~~dg~v~iw 372 (375)
... .++..++|.+ .+.+.+++++.||.+.++
T Consensus 297 -------~~~-----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 297 -------WTK-----DEESALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp -------EEE-----EEEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred -------eEe-----cCceeEecCccccccceeEEEecCCceEEE
Confidence 100 4566666665 245677777788877765
No 105
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=8.7e-36 Score=248.25 Aligned_cols=253 Identities=14% Similarity=0.211 Sum_probs=214.4
Q ss_pred CCCCCeeee--cCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCe
Q 017194 4 AEAKPRRLR--GHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKE 81 (375)
Q Consensus 4 ~~~~~~~l~--~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~ 81 (375)
+++.++.++ +|...|++++|+|+ +++||+|+.||+|++|++++++.+..+.+|...+.++.+. +..+++++.++.
T Consensus 54 tg~~~~~~~~~~~~~~V~~v~~~~~-~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~--~~~l~s~~~~~~ 130 (318)
T 4ggc_A 54 SGDILQLLQMEQPGEYISSVAWIKE-GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGH 130 (318)
T ss_dssp TCCEEEEEECCSTTCCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE--TTEEEEEETTSE
T ss_pred CCCEEEEEEecCCCCeEEEEEECCC-CCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecC--CCEEEEEecCCc
Confidence 555556554 68888999999999 8999999999999999999999999999999988876654 678999999999
Q ss_pred EEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCcee----eeeEecCcccceeEEEEeeC
Q 017194 82 VKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCL----YKSLRAGHSSICSSVQFIPW 157 (375)
Q Consensus 82 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~~v~~~~~~~~ 157 (375)
+++|+..... ..+..+.+|...+..+.+.++++++++++.|+.|++||+++++. ..... .+...|.+++++|+
T Consensus 131 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~ 207 (318)
T 4ggc_A 131 IHHHDVRVAE--HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFT-QHQGAVKAVAWCPW 207 (318)
T ss_dssp EEEEETTSSS--CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEEC-CCCSCEEEEEECTT
T ss_pred eEeeecCCCc--eeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeec-ccCCceEEEEecCC
Confidence 9999987643 44556677899999999999999999999999999999987643 33444 67889999999998
Q ss_pred CCcEE--EEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe--cCCcEE
Q 017194 158 KPWEV--ISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK--GDGVVD 233 (375)
Q Consensus 158 ~~~~l--~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~--~dg~i~ 233 (375)
+..++ ++++.++.|++||.+......... +...+..+.++| ++..+++++ .|+.|+
T Consensus 208 ~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~--------------~~~~v~~~~~~~------~~~~~~~~sg~~d~~i~ 267 (318)
T 4ggc_A 208 QSNVLATGGGTSDRHIRIWNVCSGACLSAVD--------------AHSQVCSILWSP------HYKELISGHGFAQNQLV 267 (318)
T ss_dssp STTEEEEEECTTTCEEEEEETTTCCEEEEEE--------------CSSCEEEEEEET------TTTEEEEEECTTTCCEE
T ss_pred CCcEEEEEecCCCCEEEEEeccccccccccc--------------ceeeeeeeeecc------cccceEEEEEcCCCEEE
Confidence 87544 456788999999999887776665 347889999998 677776654 789999
Q ss_pred EEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecC
Q 017194 234 VINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGN 313 (375)
Q Consensus 234 i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~ 313 (375)
+||++++ +++.++.+|...|++++|+ |+|++|+||+.
T Consensus 268 iwd~~~~----------------------------------------~~~~~l~gH~~~V~~l~~s---pdg~~l~S~s~ 304 (318)
T 4ggc_A 268 IWKYPTM----------------------------------------AKVAELKGHTSRVLSLTMS---PDGATVASAAA 304 (318)
T ss_dssp EEETTTC----------------------------------------CEEEEECCCSSCEEEEEEC---TTSSCEEEEET
T ss_pred EEECCCC----------------------------------------cEEEEEcCCCCCEEEEEEc---CCCCEEEEEec
Confidence 9999874 4456788999999999999 99999999999
Q ss_pred CCeEEEEeCCCc
Q 017194 314 DKLVKVWDCSRF 325 (375)
Q Consensus 314 dg~i~iwd~~~~ 325 (375)
||+|+|||+...
T Consensus 305 D~~v~iWd~~~~ 316 (318)
T 4ggc_A 305 DETLRLWRCFEL 316 (318)
T ss_dssp TTEEEEECCSCC
T ss_pred CCeEEEEECCCC
Confidence 999999999764
No 106
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=6.2e-37 Score=263.44 Aligned_cols=256 Identities=12% Similarity=0.168 Sum_probs=213.5
Q ss_pred CCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccC-------ceeeEeeecCccEEEEEEeCCC-CeEEEEcC
Q 017194 7 KPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSK-------DVQLVTDVGNGPVTSLCFKSGN-EDIIYVSS 78 (375)
Q Consensus 7 ~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~-------~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~ 78 (375)
.+..+.+|.+.|++++|+|+++++|++|+.||+|++||+.++ +.+..+.+|...|.+++|+|++ ++|++++.
T Consensus 73 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 152 (402)
T 2aq5_A 73 NVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC 152 (402)
T ss_dssp TCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET
T ss_pred CCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC
Confidence 456788999999999999933899999999999999999987 5678889999999999999998 68999999
Q ss_pred CCeEEEEECCCCCcccccccc--cCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeE-ecCcccc-eeEEEE
Q 017194 79 GKEVKSFDVHMPASWRPLESY--NYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSL-RAGHSSI-CSSVQF 154 (375)
Q Consensus 79 d~~i~iwd~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~-v~~~~~ 154 (375)
|+.|++||+++++. +..+ ..|...|.+++|+|++++|++++.|+.|++||+++++.+..+ . .|... +.++.|
T Consensus 153 dg~i~iwd~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~ 228 (402)
T 2aq5_A 153 DNVILVWDVGTGAA---VLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDR-PHEGTRPVHAVF 228 (402)
T ss_dssp TSCEEEEETTTTEE---EEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC-SSCSSSCCEEEE
T ss_pred CCEEEEEECCCCCc---cEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeecc-CCCCCcceEEEE
Confidence 99999999997643 3344 567899999999999999999999999999999999998888 5 77765 899999
Q ss_pred eeCCCcEEEEe---ecCCeEEEeeCCCCCc-ceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEE-EEecC
Q 017194 155 IPWKPWEVISG---GLDSKLVMWDFSKGRP-NKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICV-VAKGD 229 (375)
Q Consensus 155 ~~~~~~~l~~~---~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~-~~~~d 229 (375)
+|++. +++++ +.|+.|++||+++++. +...... +...+.+++|+| ++++|+ +++.|
T Consensus 229 ~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~------------~~~~v~~~~~s~------~~~~l~~~g~~d 289 (402)
T 2aq5_A 229 VSEGK-ILTTGFSRMSERQVALWDTKHLEEPLSLQELD------------TSSGVLLPFFDP------DTNIVYLCGKGD 289 (402)
T ss_dssp CSTTE-EEEEEECTTCCEEEEEEETTBCSSCSEEEECC------------CCSSCEEEEEET------TTTEEEEEETTC
T ss_pred cCCCc-EEEEeccCCCCceEEEEcCccccCCceEEecc------------CCCceeEEEEcC------CCCEEEEEEcCC
Confidence 99987 78888 7899999999998765 4444433 456799999999 788886 45579
Q ss_pred CcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEE
Q 017194 230 GVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLI 309 (375)
Q Consensus 230 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~ 309 (375)
|.|++||+.+++. ....+..+. |..+|.+++|+ |++.+++
T Consensus 290 g~i~i~d~~~~~~------------------------------------~~~~l~~~~-~~~~v~~~~~s---p~~~~~~ 329 (402)
T 2aq5_A 290 SSIRYFEITSEAP------------------------------------FLHYLSMFS-SKESQRGMGYM---PKRGLEV 329 (402)
T ss_dssp SCEEEEEECSSTT------------------------------------CEEEEEEEC-CSSCCSEEEEC---CGGGSCG
T ss_pred CeEEEEEecCCCc------------------------------------ceEeecccc-cCCcccceEEe---cccccce
Confidence 9999999987421 012222333 66899999999 8998877
Q ss_pred EecCCCeEEEEeCCCcee
Q 017194 310 SGGNDKLVKVWDCSRFQG 327 (375)
Q Consensus 310 s~~~dg~i~iwd~~~~~~ 327 (375)
+ .++.+++|++.++..
T Consensus 330 s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 330 N--KCEIARFYKLHERKC 345 (402)
T ss_dssp G--GTEEEEEEEEETTEE
T ss_pred e--cceeEEEEEcCCCcE
Confidence 5 456999999988643
No 107
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.3e-37 Score=266.22 Aligned_cols=318 Identities=12% Similarity=0.029 Sum_probs=209.0
Q ss_pred CceeEEEE---ecCCCCEEEEeCCCCcEEEEecccCce-------eeE--eeecCccEEEEEEe----------------
Q 017194 16 ATATCCIA---SRDRPGFVASSGEDGCICWFDLRSKDV-------QLV--TDVGNGPVTSLCFK---------------- 67 (375)
Q Consensus 16 ~~i~~~~~---~~~~~~~l~s~~~d~~i~iw~~~~~~~-------~~~--~~~~~~~v~~l~~~---------------- 67 (375)
....++.| +|+...+++.| .++.|.+|+...... ... .-.+..++..+.|+
T Consensus 16 ~~p~~~~w~~~~~~~~~l~a~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (393)
T 4gq1_A 16 VRPYTTTWCSQSPSCSNLLAIG-HDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNV 94 (393)
T ss_dssp CCEEEEEECTTSGGGTTEEEEE-ESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC--------
T ss_pred CCCeEEEEeCCCCCCCCEEEEE-CCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCcce
Confidence 34456677 34434455555 577899998643211 011 11234445555443
Q ss_pred ----CCCCeEEEEcCCCeEEEEECCCCCcc--cccccccCCCcceeEEEEcC--------CCCeEEEEeCCCcEEEEeCc
Q 017194 68 ----SGNEDIIYVSSGKEVKSFDVHMPASW--RPLESYNYNKEEINQIVCNP--------KSSFLACADDGGDVKIIDIR 133 (375)
Q Consensus 68 ----~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~v~~~~~~~--------~~~~l~~~~~dg~i~iwd~~ 133 (375)
+++.+|++++.|++|++||.+++... ..+..+.+|.+.|++++|+| ++++|++++.|++|++||++
T Consensus 95 ~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 95 NSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLT 174 (393)
T ss_dssp --CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEE
T ss_pred eecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECC
Confidence 44567999999999999999876432 34567889999999999998 78899999999999999999
Q ss_pred CceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCC------------CCCCCcccC
Q 017194 134 QHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPEN------------NGNAGQCYN 201 (375)
Q Consensus 134 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~------------~~~~~~~~~ 201 (375)
++..+..+. .|...+.+++|+|++..+|++++.|++|++||+++++............ ........+
T Consensus 175 ~~~~~~~~~-~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 253 (393)
T 4gq1_A 175 DEGPILAGY-PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGI 253 (393)
T ss_dssp TTEEEEEEE-ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CC
T ss_pred CCceeeeec-CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccc
Confidence 888777777 7999999999999986579999999999999999877654433110000 000111124
Q ss_pred CCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeE
Q 017194 202 PAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLH 281 (375)
Q Consensus 202 ~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~ 281 (375)
...+.++.|.+. +++.+++++.|+.+++||+............ ........+.|+++.
T Consensus 254 ~~~v~~v~~~~~-----dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~-~~~~~~~~~~~~~~~---------------- 311 (393)
T 4gq1_A 254 ASSLANVRWIGS-----DGSGILAMCKSGAWLRWNLFANNDYNEISDS-TMKLGPKNLLPNVQG---------------- 311 (393)
T ss_dssp SSSCSEEEEETT-----TTCEEEEECTTSEEEEEEC--------------------CCSCSEEE----------------
T ss_pred cccceeeeeecC-----CCCEEEEEeCCCCEEEEECccCCCCceEeee-cCccccEEEcccccc----------------
Confidence 567788888732 8999999999999999999876443322211 112222333333321
Q ss_pred eeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEE
Q 017194 282 LDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLV 361 (375)
Q Consensus 282 ~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 361 (375)
...+...+.. .++|. .++.++++|+.||.|++||+.++ .......+|..+|.+++|+| ||++||
T Consensus 312 ----~~~~~~~~~~-~~~~~-~~~~~~~sgs~Dg~V~lwd~~~~---------~~~~~~~~~~~~V~svafsp-dG~~LA 375 (393)
T 4gq1_A 312 ----ISLFPSLLGA-CPHPR-YMDYFATAHSQHGLIQLINTYEK---------DSNSIPIQLGMPIVDFCWHQ-DGSHLA 375 (393)
T ss_dssp ----ECSSCCSSCC-EECSS-CTTEEEEEETTTTEEEEEETTCT---------TCCEEEEECSSCEEEEEECT-TSSEEE
T ss_pred ----ccccCcceeE-EEccC-CCCEEEEEECCCCEEEEEECCCC---------cEEEEecCCCCcEEEEEEcC-CCCEEE
Confidence 1222222233 34321 35667888999999999999998 55566778999999999999 999999
Q ss_pred EeeCCCeEEEEec
Q 017194 362 VCDTSKVVKVYSI 374 (375)
Q Consensus 362 s~~~dg~v~iw~~ 374 (375)
+++.|| +.+|++
T Consensus 376 ~as~~G-v~lvrL 387 (393)
T 4gq1_A 376 IATEGS-VLLTRL 387 (393)
T ss_dssp EEESSE-EEEEEE
T ss_pred EEeCCC-eEEEEE
Confidence 998776 555543
No 108
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.5e-37 Score=266.77 Aligned_cols=255 Identities=16% Similarity=0.106 Sum_probs=193.8
Q ss_pred eeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeee--cCccEEEEEEeCCCCeEEEEcCCCeEEEEE
Q 017194 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDV--GNGPVTSLCFKSGNEDIIYVSSGKEVKSFD 86 (375)
Q Consensus 9 ~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd 86 (375)
..+.+|.++|++|+|+|.++++|++|+.||+|++||++++........ +...+.+++|+|++++|++|+.||.|++||
T Consensus 158 ~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd 237 (435)
T 4e54_B 158 IKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLN 237 (435)
T ss_dssp ECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEE
T ss_pred EEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeec
Confidence 345689999999999996689999999999999999987654333332 345678999999999999999999999999
Q ss_pred CCCCCcccccccccCCCcceeEEEEcCCCC-eEEEEeCCCcEEEEeCcCceeeeeE---ecCcccceeEEEEeeCCCcEE
Q 017194 87 VHMPASWRPLESYNYNKEEINQIVCNPKSS-FLACADDGGDVKIIDIRQHCLYKSL---RAGHSSICSSVQFIPWKPWEV 162 (375)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~l 162 (375)
++. +.+..+.+|...|.+++|+|++. +|++++.|+.|++||+++.+....+ . +|...|++++|+|++. +|
T Consensus 238 ~~~----~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~-~h~~~v~~~~~spdg~-~l 311 (435)
T 4e54_B 238 MDG----KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSL-PHRHPVNAACFSPDGA-RL 311 (435)
T ss_dssp SSS----CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCC-BCSSCEEECCBCTTSS-EE
T ss_pred cCc----ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEee-eccccccceeECCCCC-ee
Confidence 874 34556678899999999999876 6888999999999999876544333 4 7899999999999998 79
Q ss_pred EEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe------------cCC
Q 017194 163 ISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK------------GDG 230 (375)
Q Consensus 163 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~------------~dg 230 (375)
++++.|+.|++||+++++....+.... .... ....+....++| ++..++++. .++
T Consensus 312 ~s~~~D~~i~iwd~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~------~~~~~~~~~~~d~~~~~~~~~~~~ 378 (435)
T 4e54_B 312 LTTDQKSEIRVYSASQWDCPLGLIPHP-HRHF------QHLTPIKAAWHP------RYNLIVVGRYPDPNFKSCTPYELR 378 (435)
T ss_dssp EEEESSSCEEEEESSSSSSEEEECCCC-CCCC------SSSCCCBCEECS------SSSCEEEECCCCTTSCCSSTTCCC
T ss_pred EEEcCCCEEEEEECCCCccceEEeccc-cccc------ccceeEEEEEcC------CCCEEEEEEcCCCCeEEEEecCCC
Confidence 999999999999999988777665321 1000 011122334444 344444443 345
Q ss_pred cEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeee-ecCCCccEEEE-EEeecCCCCcEE
Q 017194 231 VVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYS-VGGHTAAASCV-AFSMFGERGKYL 308 (375)
Q Consensus 231 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~-~~s~~~~~~~~l 308 (375)
.|++||..+++ .+.. ..+|...|.++ +|+ |+|++|
T Consensus 379 ~i~iwd~~~g~----------------------------------------~~~~l~~~~~~~v~s~~~fs---pdg~~l 415 (435)
T 4e54_B 379 TIDVFDGNSGK----------------------------------------MMCQLYDPESSGISSLNEFN---PMGDTL 415 (435)
T ss_dssp CEEEECSSSCC----------------------------------------EEEEECCSSCCCCCCEEEEC---TTSSCE
T ss_pred EEEEEECCCCc----------------------------------------EEEEEeCCCCCcEEEEEEEC---CCCCEE
Confidence 79999998753 2223 34677788887 699 999999
Q ss_pred EEecCCCeEEEEeCCCce
Q 017194 309 ISGGNDKLVKVWDCSRFQ 326 (375)
Q Consensus 309 ~s~~~dg~i~iwd~~~~~ 326 (375)
++|+ |+.|+||++++++
T Consensus 416 asg~-d~~i~iW~~~~gk 432 (435)
T 4e54_B 416 ASAM-GYHILIWSQQEAR 432 (435)
T ss_dssp EEEC-SSEEEECCCC---
T ss_pred EEEc-CCcEEEEECCcCe
Confidence 9887 7899999999873
No 109
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=5.9e-37 Score=259.29 Aligned_cols=244 Identities=12% Similarity=0.130 Sum_probs=190.8
Q ss_pred eeecCCCceeEEEEecCCCCEEEEe-----------CCCCcEEEEecccCceeeE-e--------eecCccEEEEEEeCC
Q 017194 10 RLRGHKATATCCIASRDRPGFVASS-----------GEDGCICWFDLRSKDVQLV-T--------DVGNGPVTSLCFKSG 69 (375)
Q Consensus 10 ~l~~h~~~i~~~~~~~~~~~~l~s~-----------~~d~~i~iw~~~~~~~~~~-~--------~~~~~~v~~l~~~~~ 69 (375)
.|.+|.+.|.++++++ +.+++| +.|+.+++|++.+.+.... . ..+...+.+++|+||
T Consensus 68 ~l~~~~~~v~s~~~~~---~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpD 144 (365)
T 4h5i_A 68 ALEDNDDSPTAIDASK---GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISRE 144 (365)
T ss_dssp ECCTTSCCCCEEEEET---TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTT
T ss_pred EccCCCCceEEEEeCC---CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCC
Confidence 4678889999888764 455554 4578899999876543211 1 123456899999999
Q ss_pred CCeEEEEc--CCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeee--eEecCc
Q 017194 70 NEDIIYVS--SGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYK--SLRAGH 145 (375)
Q Consensus 70 ~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~ 145 (375)
|+++++++ .|++|++||+++++....+ . |...|.+++|+|+++++++++.+ .+.+|+..+++.+. ... .|
T Consensus 145 g~~la~as~~~d~~i~iwd~~~~~~~~~~---~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~-~~ 218 (365)
T 4h5i_A 145 GTVAAIASSKVPAIMRIIDPSDLTEKFEI---E-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDF-DK 218 (365)
T ss_dssp SSCEEEEESCSSCEEEEEETTTTEEEEEE---E-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCC-CT
T ss_pred CCEEEEEECCCCCEEEEeECCCCcEEEEe---C-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecC-CC
Confidence 99987554 6899999999986554433 2 56789999999999999999865 56666666665543 233 68
Q ss_pred ccceeEEEEeeCCCcEEEEeecCC----eEEEeeCCCCCcce----EEecCCCCCCCCCCcccCCCceeEEeecCCcccc
Q 017194 146 SSICSSVQFIPWKPWEVISGGLDS----KLVMWDFSKGRPNK----IVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLD 217 (375)
Q Consensus 146 ~~~v~~~~~~~~~~~~l~~~~~d~----~i~~wd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 217 (375)
...|.+++|+|++. .+++++.|+ .+++||+....... .+. + +...|++++|+|
T Consensus 219 ~~~v~~v~fspdg~-~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~-~------------~~~~V~~~~~Sp----- 279 (365)
T 4h5i_A 219 NWSLSKINFIADDT-VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVT-N------------RFKGITSMDVDM----- 279 (365)
T ss_dssp TEEEEEEEEEETTE-EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEE-S------------SCSCEEEEEECT-----
T ss_pred CCCEEEEEEcCCCC-EEEEEecCCcceeEEeecccccceecceeeeeec-C------------CCCCeEeEEECC-----
Confidence 88999999999998 788888877 68889987654322 222 2 467899999999
Q ss_pred CCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeee-ecCCCccEEEE
Q 017194 218 KTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYS-VGGHTAAASCV 296 (375)
Q Consensus 218 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~ 296 (375)
++++||+|+.|+.|+|||++++ +++.. +.+|..+|+++
T Consensus 280 -dg~~lasgs~D~~V~iwd~~~~----------------------------------------~~~~~~~~gH~~~V~~v 318 (365)
T 4h5i_A 280 -KGELAVLASNDNSIALVKLKDL----------------------------------------SMSKIFKQAHSFAITEV 318 (365)
T ss_dssp -TSCEEEEEETTSCEEEEETTTT----------------------------------------EEEEEETTSSSSCEEEE
T ss_pred -CCCceEEEcCCCEEEEEECCCC----------------------------------------cEEEEecCcccCCEEEE
Confidence 8999999999999999999975 33444 57899999999
Q ss_pred EEeecCCCCcEEEEecCCCeEEEEeCCCc
Q 017194 297 AFSMFGERGKYLISGGNDKLVKVWDCSRF 325 (375)
Q Consensus 297 ~~s~~~~~~~~l~s~~~dg~i~iwd~~~~ 325 (375)
+|+ |||++||+|+.|++|+|||+...
T Consensus 319 ~fS---pdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 319 TIS---PDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEC---TTSCEEEEEETTSEEEEEECCTT
T ss_pred EEC---CCCCEEEEEeCCCeEEEEEcCCC
Confidence 999 99999999999999999999764
No 110
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.3e-36 Score=264.13 Aligned_cols=255 Identities=17% Similarity=0.265 Sum_probs=215.9
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEE
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVK 83 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~ 83 (375)
+++.+..+.+|.+.|.+++| + +++|++|+.||+|++||+.+++.+..+..|...|.+++|++ ..+++++.|+.|+
T Consensus 162 ~~~~~~~~~~h~~~v~~l~~--~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~ 236 (435)
T 1p22_A 162 TLECKRILTGHTGSVLCLQY--D-ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIA 236 (435)
T ss_dssp SCCEEEEECCCSSCEEEEEC--C-SSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEE
T ss_pred CCeEEEEEcCCCCcEEEEEE--C-CCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEE
Confidence 55677889999999999999 4 78999999999999999999999999999999999999974 5899999999999
Q ss_pred EEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEE
Q 017194 84 SFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVI 163 (375)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 163 (375)
+||+.++........+.+|...|.+++| +++++++|+.||.|++||+++++.+..+. +|...|.++.+. +. +++
T Consensus 237 vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~--~~-~l~ 310 (435)
T 1p22_A 237 VWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLN-GHKRGIACLQYR--DR-LVV 310 (435)
T ss_dssp EEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEEE--TT-EEE
T ss_pred EEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEc-CCCCcEEEEEeC--CC-EEE
Confidence 9999987665555667788999999999 77899999999999999999999999999 999999999995 44 799
Q ss_pred EeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCccee
Q 017194 164 SGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNI 243 (375)
Q Consensus 164 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 243 (375)
+|+.||.|++||+++++++..+.. |...|.++++ ++.+|++|+.||.|++||+.+....
T Consensus 311 ~g~~dg~i~iwd~~~~~~~~~~~~-------------h~~~v~~~~~--------~~~~l~sg~~dg~i~vwd~~~~~~~ 369 (435)
T 1p22_A 311 SGSSDNTIRLWDIECGACLRVLEG-------------HEELVRCIRF--------DNKRIVSGAYDGKIKVWDLVAALDP 369 (435)
T ss_dssp EEETTSCEEEEETTTCCEEEEECC-------------CSSCEEEEEC--------CSSEEEEEETTSCEEEEEHHHHTST
T ss_pred EEeCCCeEEEEECCCCCEEEEEeC-------------CcCcEEEEEe--------cCCEEEEEeCCCcEEEEECCCCCCc
Confidence 999999999999999998888763 4678999998 4889999999999999999764311
Q ss_pred ecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCC
Q 017194 244 SRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCS 323 (375)
Q Consensus 244 ~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~ 323 (375)
.... ...++..+.+|...|.+++|. +++|++++.||.|++||+.
T Consensus 370 ~~~~-------------------------------~~~~~~~~~~h~~~v~~l~~~-----~~~l~s~s~Dg~i~iwd~~ 413 (435)
T 1p22_A 370 RAPA-------------------------------GTLCLRTLVEHSGRVFRLQFD-----EFQIVSSSHDDTILIWDFL 413 (435)
T ss_dssp TSCT-------------------------------TTTEEEEECCCSSCCCCEEEC-----SSCEEECCSSSEEEEEC--
T ss_pred cccc-------------------------------cchheeeccCCCCCeEEEEeC-----CCEEEEEeCCCEEEEEECC
Confidence 1000 001445778899999999874 6789999999999999998
Q ss_pred Cce
Q 017194 324 RFQ 326 (375)
Q Consensus 324 ~~~ 326 (375)
+..
T Consensus 414 ~~~ 416 (435)
T 1p22_A 414 NDP 416 (435)
T ss_dssp ---
T ss_pred CCC
Confidence 863
No 111
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=5.3e-37 Score=258.26 Aligned_cols=250 Identities=9% Similarity=0.029 Sum_probs=205.3
Q ss_pred EeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCC-eEEEEeCCCcEEEEe
Q 017194 53 VTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSS-FLACADDGGDVKIID 131 (375)
Q Consensus 53 ~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd 131 (375)
...+|...|.+++|+|++++|++++.|+.|++|++.++...........|...|.+++|+|+++ +|++++.||.|++||
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence 3457999999999999999999999999999999987653333444557889999999999999 999999999999999
Q ss_pred C-cCceeeeeEecC--cccceeEEEEeeCCCcEEEEeecCCeEEEeeCCC---------CCcceEEecCCCCCCCCCCcc
Q 017194 132 I-RQHCLYKSLRAG--HSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK---------GRPNKIVNFGLPENNGNAGQC 199 (375)
Q Consensus 132 ~-~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~---------~~~~~~~~~~~~~~~~~~~~~ 199 (375)
+ .+++. ..+. + |...|.+++|+| +. .+++++.|+.|++||+++ ++++..+.
T Consensus 86 ~~~~~~~-~~~~-~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~------------- 148 (342)
T 1yfq_A 86 LIGSPSF-QALT-NNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK------------- 148 (342)
T ss_dssp SSSSSSE-EECB-SCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-------------
T ss_pred eccCCce-Eecc-ccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccccCCeeeEEe-------------
Confidence 9 77755 6667 7 999999999999 76 899999999999999987 55554443
Q ss_pred cCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCC-cceeecccccCCCCCCceeecccccceeeeeeeecCCcc
Q 017194 200 YNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIES-ELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGK 278 (375)
Q Consensus 200 ~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~ 278 (375)
+...+.+++|+| ++ +++++.|+.|++||+++ ....
T Consensus 149 -~~~~v~~~~~~~------~~--l~~~~~d~~i~i~d~~~~~~~~----------------------------------- 184 (342)
T 1yfq_A 149 -VKNKIFTMDTNS------SR--LIVGMNNSQVQWFRLPLCEDDN----------------------------------- 184 (342)
T ss_dssp -SCCCEEEEEECS------SE--EEEEESTTEEEEEESSCCTTCC-----------------------------------
T ss_pred -eCCceEEEEecC------Cc--EEEEeCCCeEEEEECCcccccc-----------------------------------
Confidence 457899999987 44 99999999999999986 3211
Q ss_pred eeEeeeeecCCCccEEEEEEeecCC-CCcEEEEecCCCeEEEEeCCCc--eeeeecchhhhhhhhccc---------ccc
Q 017194 279 RLHLDYSVGGHTAAASCVAFSMFGE-RGKYLISGGNDKLVKVWDCSRF--QGVQTSINNDLLIKNINL---------NKK 346 (375)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~s~~~~-~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~---------~~~ 346 (375)
.......|...+.+++|+ | +++++++++.||.|++|+++.. ... ......+..| ...
T Consensus 185 ---~~~~~~~~~~~i~~i~~~---~~~~~~l~~~~~dg~i~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 253 (342)
T 1yfq_A 185 ---GTIEESGLKYQIRDVALL---PKEQEGYACSSIDGRVAVEFFDDQGDDYN-----SSKRFAFRCHRLNLKDTNLAYP 253 (342)
T ss_dssp ---CEEEECSCSSCEEEEEEC---SGGGCEEEEEETTSEEEEEECCTTCCSTT-----CTTCEEEECCCCCTTCCSSCCC
T ss_pred ---ceeeecCCCCceeEEEEC---CCCCCEEEEEecCCcEEEEEEcCCCcccc-----cccceeeeccccccccccccee
Confidence 112344677899999999 9 9999999999999999999875 100 0223334445 449
Q ss_pred eeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 347 VNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 347 v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
|.+++|+| ++++|++++.||.|++||++
T Consensus 254 i~~~~~s~-~~~~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 254 VNSIEFSP-RHKFLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp EEEEEECT-TTCCEEEEETTSCEEEEETT
T ss_pred EEEEEEcC-CCCEEEEecCCceEEEEcCc
Confidence 99999999 99999999999999999974
No 112
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.8e-35 Score=257.74 Aligned_cols=282 Identities=14% Similarity=0.165 Sum_probs=232.7
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEE
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVK 83 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~ 83 (375)
+++.+..+.+|.+.|.+++|+ +++|++|+.||+|++||+.+++.+..+.+|...|.++.|+ ++.+++++.|+.|+
T Consensus 148 ~~~~~~~~~~h~~~v~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~ 222 (445)
T 2ovr_B 148 TGKCLRTLVGHTGGVWSSQMR---DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLR 222 (445)
T ss_dssp TCCEEEECCCCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEE
T ss_pred CCcEEEEEcCCCCCEEEEEec---CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEE
Confidence 566778899999999999997 4599999999999999999999999999999999999996 56799999999999
Q ss_pred EEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEE
Q 017194 84 SFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVI 163 (375)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 163 (375)
+||+.+++. +..+.+|...|.++.+ +++++++++.||.|++||+++++.+..+. +|...|.+++| ++. .++
T Consensus 223 ~wd~~~~~~---~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~--~~~-~l~ 293 (445)
T 2ovr_B 223 VWDIETGQC---LHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQF--DGI-HVV 293 (445)
T ss_dssp EEESSSCCE---EEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEEC-CCSSCEEEEEE--CSS-EEE
T ss_pred EEECCCCcE---EEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEec-CCCCceEEEEE--CCC-EEE
Confidence 999987643 4455678899999999 77899999999999999999999999999 99999999999 565 799
Q ss_pred EeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCccee
Q 017194 164 SGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNI 243 (375)
Q Consensus 164 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 243 (375)
+++.|+.|++||+++++.+..+.. +...+.++.+ +++++++++.||.|++||+++++..
T Consensus 294 ~~~~d~~i~i~d~~~~~~~~~~~~-------------~~~~v~~~~~--------~~~~l~~~~~dg~i~vwd~~~~~~~ 352 (445)
T 2ovr_B 294 SGSLDTSIRVWDVETGNCIHTLTG-------------HQSLTSGMEL--------KDNILVSGNADSTVKIWDIKTGQCL 352 (445)
T ss_dssp EEETTSCEEEEETTTCCEEEEECC-------------CCSCEEEEEE--------ETTEEEEEETTSCEEEEETTTCCEE
T ss_pred EEeCCCeEEEEECCCCCEEEEEcC-------------CcccEEEEEE--------eCCEEEEEeCCCeEEEEECCCCcEE
Confidence 999999999999999998887763 3567777777 4679999999999999999988766
Q ss_pred eccccc--CCCCCCceeecccccceeee------eeeecCCcceeEeeeee--cCCCccEEEEEEeecCCCCcEEEEecC
Q 017194 244 SRSKST--TKPLKGSQSTSKVNIRDAEM------EILDQSGGKRLHLDYSV--GGHTAAASCVAFSMFGERGKYLISGGN 313 (375)
Q Consensus 244 ~~~~~~--~~~~~~~~~~s~~g~~~~~~------~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~~~~l~s~~~ 313 (375)
...... ....+.++++ ++.++++. ..++.........+... .+|...|.+++|+ |++.++++|+.
T Consensus 353 ~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s---~~~~~la~~~~ 427 (445)
T 2ovr_B 353 QTLQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRAS---NTKLVCAVGSR 427 (445)
T ss_dssp EEECSTTSCSSCEEEEEE--CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEEC---SSEEEEEEECS
T ss_pred EEEccCCCCCCCEEEEEE--CCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEec---CCEEEEEEccc
Confidence 655442 3344555555 46666652 23444444333332221 4678899999999 99999999999
Q ss_pred CCe----EEEEeCCCc
Q 017194 314 DKL----VKVWDCSRF 325 (375)
Q Consensus 314 dg~----i~iwd~~~~ 325 (375)
||+ |.+||+...
T Consensus 428 dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 428 NGTEETKLLVLDFDVD 443 (445)
T ss_dssp SSSSCCEEEEEECCCC
T ss_pred CCCCccEEEEEECCCC
Confidence 997 999999864
No 113
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=8.8e-37 Score=266.39 Aligned_cols=263 Identities=14% Similarity=0.171 Sum_probs=198.5
Q ss_pred cCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCc--------ccccccccCCC------------cceeEEEEcCCC-
Q 017194 57 GNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPAS--------WRPLESYNYNK------------EEINQIVCNPKS- 115 (375)
Q Consensus 57 ~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~--------~~~~~~~~~~~------------~~v~~~~~~~~~- 115 (375)
+.+.|.+++|+|++++|++|+.||.|++||+.+++. ......+.+|. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 578999999999999999999999999999986542 12355667787 889999999998
Q ss_pred -CeEEEEeCCCcEEEEeCcCceee---------------------------------------eeEecCcccceeEEEEe
Q 017194 116 -SFLACADDGGDVKIIDIRQHCLY---------------------------------------KSLRAGHSSICSSVQFI 155 (375)
Q Consensus 116 -~~l~~~~~dg~i~iwd~~~~~~~---------------------------------------~~~~~~~~~~v~~~~~~ 155 (375)
.+|++++.|+.|++||+.+++.. ..+..+|...|.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 78999999999999999764431 12222799999999999
Q ss_pred eCCCcEEEEeecCCeEEEeeCCC-CCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCC-CEEEEEecCCcEE
Q 017194 156 PWKPWEVISGGLDSKLVMWDFSK-GRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTN-KICVVAKGDGVVD 233 (375)
Q Consensus 156 ~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~l~~~~~dg~i~ 233 (375)
|+++ +|+++ .|+.|++||+++ ++....+.... .....|...|.+++|+| ++ ++|++++.||.|+
T Consensus 187 ~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~------~~~~~~~~~v~~~~~~p------~~~~~l~s~~~dg~i~ 252 (447)
T 3dw8_B 187 SDYE-TYLSA-DDLRINLWHLEITDRSFNIVDIKP------ANMEELTEVITAAEFHP------NSCNTFVYSSSKGTIR 252 (447)
T ss_dssp TTSS-EEEEE-CSSEEEEEETTEEEEEEEEEECCC------SSGGGCCCCEEEEEECS------SCTTEEEEEETTSCEE
T ss_pred CCCC-EEEEe-CCCeEEEEECCCCCceeeeeeccc------ccccccCcceEEEEECC------CCCcEEEEEeCCCeEE
Confidence 9998 78888 799999999984 44444332110 01112567899999999 67 9999999999999
Q ss_pred EEeCCCcceee----cccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEE
Q 017194 234 VINIESELNIS----RSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLI 309 (375)
Q Consensus 234 i~d~~~~~~~~----~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~ 309 (375)
+||++++.... ....+. .......+.+|...|.+++|+ |++++|+
T Consensus 253 iwd~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~v~~~~~s---~~g~~l~ 301 (447)
T 3dw8_B 253 LCDMRASALCDRHSKLFEEPE----------------------------DPSNRSFFSEIISSISDVKFS---HSGRYMM 301 (447)
T ss_dssp EEETTTCSSSCTTCEEECCC---------------------------------CCHHHHHTTCEEEEEEC---TTSSEEE
T ss_pred EEECcCCccccceeeEeccCC----------------------------CccccccccccCceEEEEEEC---CCCCEEE
Confidence 99999754210 000000 000011222344599999999 9999999
Q ss_pred EecCCCeEEEEeCCC-ceeeeecchhhhhhhhcccccc---------------eeeeeecCCCCCcEEEeeCCCeEEEEe
Q 017194 310 SGGNDKLVKVWDCSR-FQGVQTSINNDLLIKNINLNKK---------------VNWLCTTPTESENLVVCDTSKVVKVYS 373 (375)
Q Consensus 310 s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~~~l~s~~~dg~v~iw~ 373 (375)
+++. +.|++||+.. + +.+..+.+|... +..++|+| ++++|++++.||.|++||
T Consensus 302 ~~~~-~~v~iwd~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~-~~~~l~s~s~dg~v~iwd 370 (447)
T 3dw8_B 302 TRDY-LSVKVWDLNMEN---------RPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNG-SDSVVMTGSYNNFFRMFD 370 (447)
T ss_dssp EEES-SEEEEEETTCCS---------SCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECT-TSSEEEEECSTTEEEEEE
T ss_pred EeeC-CeEEEEeCCCCc---------cccceeeccccccccccccccccccccceEEEECC-CCCEEEEeccCCEEEEEE
Confidence 9999 9999999987 5 445555556432 33489999 999999999999999999
Q ss_pred cC
Q 017194 374 IS 375 (375)
Q Consensus 374 ~~ 375 (375)
+.
T Consensus 371 ~~ 372 (447)
T 3dw8_B 371 RN 372 (447)
T ss_dssp TT
T ss_pred cC
Confidence 74
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-36 Score=260.65 Aligned_cols=272 Identities=10% Similarity=0.087 Sum_probs=204.9
Q ss_pred CCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEE
Q 017194 7 KPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFD 86 (375)
Q Consensus 7 ~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd 86 (375)
..+.+++|...|.+++|+|+ | .++.+.+|+.+.. ....+ .|...|.+++|+|+|+.||+++.||.|++||
T Consensus 44 ~~~~l~gh~~~v~~V~FsPd-g-------~~~~~~~~~~~~~-~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd 113 (588)
T 2j04_A 44 YAKDINCNSKNLFHVKEFPL-E-------FENKLDFELAQQN-GLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFK 113 (588)
T ss_dssp CCSCCSSBGGGTEEEEEECC-C-------CCCTTTTSCCCSS-CSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEE
T ss_pred ccceecCCCccEEEEEECCC-C-------CcceEEEEeCCCc-eEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEe
Confidence 34556899999999999999 5 4566666654322 22233 4588999999999999999999999999999
Q ss_pred CCCCCcccccccccCCCc-----ceeEEEEcCCCCeEEEEeCCCcEEEEeCcCcee-------eeeEe---cCcccceeE
Q 017194 87 VHMPASWRPLESYNYNKE-----EINQIVCNPKSSFLACADDGGDVKIIDIRQHCL-------YKSLR---AGHSSICSS 151 (375)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-------~~~~~---~~~~~~v~~ 151 (375)
.+. .+..+. |.. .+.+++|+|||++|++|+.||+|++||+.+++. +..+. .+|...|.+
T Consensus 114 ~~~-----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~s 187 (588)
T 2j04_A 114 DNK-----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTH 187 (588)
T ss_dssp TTE-----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEE
T ss_pred CCc-----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEE
Confidence 653 333344 444 599999999999999999999999999998752 56662 277889999
Q ss_pred EEEeeCCCcEEEEeecCCeEEEeeCCCCCcc---eEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEec
Q 017194 152 VQFIPWKPWEVISGGLDSKLVMWDFSKGRPN---KIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKG 228 (375)
Q Consensus 152 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~ 228 (375)
++|+|+| +++++.|+.|++||+..++.. ..+..+ |...|.+++|+ ++.+++++
T Consensus 188 VawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~------------h~~~V~svaFs--------g~~LASa~- 243 (588)
T 2j04_A 188 IVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNA------------SRRKITDLKIV--------DYKVVLTC- 243 (588)
T ss_dssp EEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECC------------CSSCCCCEEEE--------TTEEEEEC-
T ss_pred EEEcCCc---EEEEeCCCeEEEEECCCCccccceeeeccc------------ccCcEEEEEEE--------CCEEEEEe-
Confidence 9999997 788899999999999887743 344323 46789999996 57888887
Q ss_pred CCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEE--eecCCCCc
Q 017194 229 DGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAF--SMFGERGK 306 (375)
Q Consensus 229 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~~~ 306 (375)
++.|++||+.+.. ......+|...|..++| + |++.
T Consensus 244 ~~tIkLWd~~~~~----------------------------------------~~~~~~gh~~~V~~va~~~s---~d~~ 280 (588)
T 2j04_A 244 PGYVHKIDLKNYS----------------------------------------ISSLKTGSLENFHIIPLNHE---KEST 280 (588)
T ss_dssp SSEEEEEETTTTE----------------------------------------EEEEECSCCSCCCEEEETTC---SSCE
T ss_pred CCeEEEEECCCCe----------------------------------------EEEEEcCCCceEEEEEeeeC---CCCC
Confidence 6999999999742 11122278899999999 8 8999
Q ss_pred EEEEecCCCeEEEEeCCCceeeee--------------cchhhhhhhhcccccceeeeeecCCCCCcEEEee
Q 017194 307 YLISGGNDKLVKVWDCSRFQGVQT--------------SINNDLLIKNINLNKKVNWLCTTPTESENLVVCD 364 (375)
Q Consensus 307 ~l~s~~~dg~i~iwd~~~~~~~~~--------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 364 (375)
.|+++++||+ ++|..+.-..... ......+..+ .+...|.+++++| ||+.+|+++
T Consensus 281 ~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~-~~~~~I~~va~SP-dG~~lA~~~ 349 (588)
T 2j04_A 281 ILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNY-ETTLVIHGISLSP-DGYSIAIVY 349 (588)
T ss_dssp EEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSS-CCEEEEEEEEECT-TSSEEEEEE
T ss_pred EEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeee-ccceEEEEEEECC-CCCEEEEEE
Confidence 9999999999 9998764321100 0000111122 2355699999999 999999886
No 115
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=8.1e-36 Score=259.22 Aligned_cols=285 Identities=15% Similarity=0.133 Sum_probs=228.1
Q ss_pred CeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceee-----EeeecCccEEEEEEeCCCCeEEEEcCCCeE
Q 017194 8 PRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQL-----VTDVGNGPVTSLCFKSGNEDIIYVSSGKEV 82 (375)
Q Consensus 8 ~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~-----~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i 82 (375)
+..+..+ ..+.+++|+|+ +.++++++.++.|++||+.+++... .+.+|...|.+++|+|+++.+++++.|+.|
T Consensus 116 ~~~~~~~-~~~~~~~~s~~-~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v 193 (433)
T 3bws_A 116 ISRFKTG-FQPKSVRFIDN-TRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAV 193 (433)
T ss_dssp EEEEECS-SCBCCCEESSS-SEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEE
T ss_pred EEEEcCC-CCceEEEEeCC-CeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEE
Confidence 3444444 44668999995 8899999999999999999998876 344688899999999999999999999999
Q ss_pred EEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEE-eCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcE
Q 017194 83 KSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACA-DDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWE 161 (375)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 161 (375)
++||+++++.. ..+..|...+.+++|+|+++.++++ +.++.|++||+++++.+..+. . ...+.+++|+|+++ .
T Consensus 194 ~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~-~-~~~~~~~~~~~~g~-~ 267 (433)
T 3bws_A 194 HVFDLKTLAYK---ATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD-K-IGLPRGLLLSKDGK-E 267 (433)
T ss_dssp EEEETTTCCEE---EEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC-C-CSEEEEEEECTTSS-E
T ss_pred EEEECCCceEE---EEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec-C-CCCceEEEEcCCCC-E
Confidence 99999876543 3344567889999999999988554 479999999999998888877 4 45699999999998 5
Q ss_pred EEEee--------cCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCC-EEEEEecCCcE
Q 017194 162 VISGG--------LDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNK-ICVVAKGDGVV 232 (375)
Q Consensus 162 l~~~~--------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~l~~~~~dg~i 232 (375)
+++++ .|+.|++||+++++....+.. ...+..++|+| +++ ++++++.++.|
T Consensus 268 l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~--------------~~~~~~~~~~~------~g~~l~~~~~~~~~v 327 (433)
T 3bws_A 268 LYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP--------------PGNKRHIVSGN------TENKIYVSDMCCSKI 327 (433)
T ss_dssp EEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE--------------EECEEEEEECS------STTEEEEEETTTTEE
T ss_pred EEEEECCCCccccCCCeEEEEECCCCcEEeeccC--------------CCCcceEEECC------CCCEEEEEecCCCEE
Confidence 77776 488999999999887776642 35788999999 676 55666899999
Q ss_pred EEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEec
Q 017194 233 DVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGG 312 (375)
Q Consensus 233 ~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~ 312 (375)
++||+.+++ ....+. +...+.+++|+ |+|++|++++
T Consensus 328 ~v~d~~~~~----------------------------------------~~~~~~-~~~~~~~~~~s---~dg~~l~~~~ 363 (433)
T 3bws_A 328 EVYDLKEKK----------------------------------------VQKSIP-VFDKPNTIALS---PDGKYLYVSC 363 (433)
T ss_dssp EEEETTTTE----------------------------------------EEEEEE-CSSSEEEEEEC---TTSSEEEEEE
T ss_pred EEEECCCCc----------------------------------------EEEEec-CCCCCCeEEEc---CCCCEEEEEe
Confidence 999998642 122222 45678899999 8998888776
Q ss_pred C---------------CCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeC-CCeEEEEecC
Q 017194 313 N---------------DKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDT-SKVVKVYSIS 375 (375)
Q Consensus 313 ~---------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~v~iw~~~ 375 (375)
. ||.|++||+.+++. +..+.. ...+.+++|+| ++++|++++. |+.|++|+++
T Consensus 364 ~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~---------~~~~~~-~~~~~~~~~s~-dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 364 RGPNHPTEGYLKKGLVLGKVYVIDTTTDTV---------KEFWEA-GNQPTGLDVSP-DNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp CCCCCTTTCTTSCCSSCCEEEEEETTTTEE---------EEEEEC-SSSEEEEEECT-TSCEEEEEETTTTEEEEEEET
T ss_pred cCCCccccccccccccceEEEEEECCCCcE---------EEEecC-CCCCceEEEcC-CCCEEEEEECCCCeEEEEEec
Confidence 5 57999999998743 333333 45789999999 9999988774 9999999974
No 116
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-35 Score=244.30 Aligned_cols=247 Identities=15% Similarity=0.131 Sum_probs=211.7
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccC---ceeeEeeecCccEEEEEEeCCCCeEEEEcCCC
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSK---DVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGK 80 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~---~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~ 80 (375)
+......+..|.+.|.+++|+|+ +++|++++.||.|++|++... +....+..|...|.+++| +++++++++.|+
T Consensus 48 ~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~ 124 (313)
T 3odt_A 48 DQWLGTVVYTGQGFLNSVCYDSE-KELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDK 124 (313)
T ss_dssp SSEEEEEEEECSSCEEEEEEETT-TTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTS
T ss_pred CCEEEEEeecCCccEEEEEECCC-CCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCC
Confidence 34456678899999999999998 899999999999999998754 557778889999999999 467999999999
Q ss_pred eEEEEECCCCCcccccccccCCCcceeEEEEcC-CCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCC
Q 017194 81 EVKSFDVHMPASWRPLESYNYNKEEINQIVCNP-KSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKP 159 (375)
Q Consensus 81 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 159 (375)
.|++||. ......+..|...+.++.|.| +++++++++.||.|++|| ..+....+...|...+.+++|+|++.
T Consensus 125 ~i~~~d~-----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~ 197 (313)
T 3odt_A 125 TAKVWKE-----GSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH 197 (313)
T ss_dssp EEEEEET-----TEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE
T ss_pred CEEEEcC-----CcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe
Confidence 9999992 244555667889999999988 899999999999999999 45666677723899999999999985
Q ss_pred cEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCC
Q 017194 160 WEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIES 239 (375)
Q Consensus 160 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 239 (375)
+++++.|+.|++||+++++.+..+.. |...+.+++|+| ++ .+++++.||.|++||+++
T Consensus 198 --~~~~~~dg~i~i~d~~~~~~~~~~~~-------------~~~~i~~~~~~~------~~-~l~~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 198 --FISCSNDGLIKLVDMHTGDVLRTYEG-------------HESFVYCIKLLP------NG-DIVSCGEDRTVRIWSKEN 255 (313)
T ss_dssp --EEEEETTSEEEEEETTTCCEEEEEEC-------------CSSCEEEEEECT------TS-CEEEEETTSEEEEECTTT
T ss_pred --EEEccCCCeEEEEECCchhhhhhhhc-------------CCceEEEEEEec------CC-CEEEEecCCEEEEEECCC
Confidence 89999999999999999998888873 468899999999 56 689999999999999987
Q ss_pred cceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEE
Q 017194 240 ELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKV 319 (375)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~i 319 (375)
+ +....+..|...|.+++|+ |+++ +++++.||.|++
T Consensus 256 ~----------------------------------------~~~~~~~~~~~~i~~~~~~---~~~~-~~~~~~dg~i~i 291 (313)
T 3odt_A 256 G----------------------------------------SLKQVITLPAISIWSVDCM---SNGD-IIVGSSDNLVRI 291 (313)
T ss_dssp C----------------------------------------CEEEEEECSSSCEEEEEEC---TTSC-EEEEETTSCEEE
T ss_pred C----------------------------------------ceeEEEeccCceEEEEEEc---cCCC-EEEEeCCCcEEE
Confidence 4 3344667888899999999 8988 667899999999
Q ss_pred EeCCCce
Q 017194 320 WDCSRFQ 326 (375)
Q Consensus 320 wd~~~~~ 326 (375)
||+++++
T Consensus 292 w~~~~~~ 298 (313)
T 3odt_A 292 FSQEKSR 298 (313)
T ss_dssp EESCGGG
T ss_pred EeCCCCc
Confidence 9999874
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.1e-34 Score=248.78 Aligned_cols=266 Identities=13% Similarity=0.101 Sum_probs=214.7
Q ss_pred CCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeE-EEEcCCCeEEEEECCCCCcccccccccCCCcce
Q 017194 28 PGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDI-IYVSSGKEVKSFDVHMPASWRPLESYNYNKEEI 106 (375)
Q Consensus 28 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v 106 (375)
+.++++++.|+.|++||+.+++.+..+..|. .+.+++|+|+++++ ++++.|+.|++||+.+++....+ .. ...+
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~---~~-~~~v 76 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV---PA-GSSP 76 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE---EC-SSSE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEE---EC-CCCc
Confidence 3578899999999999999999988888665 58999999999977 66778999999999876544333 32 3489
Q ss_pred eEEEEcCCCCeEEEE-eCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEE
Q 017194 107 NQIVCNPKSSFLACA-DDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIV 185 (375)
Q Consensus 107 ~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 185 (375)
.+++|+|++++|+++ +.++.|++||+.+++.+..+. . ...+.+++|+|+++.++++++.++.|++||+++++....+
T Consensus 77 ~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 154 (391)
T 1l0q_A 77 QGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK-T-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTV 154 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-C-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe-C-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 999999999987655 467999999999999988887 4 4578999999999854578888999999999999888877
Q ss_pred ecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEE-EEEecCCcEEEEeCCCcceeecccccCCCCCCceeeccccc
Q 017194 186 NFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKIC-VVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNI 264 (375)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~ 264 (375)
..+ ..+..++|+| +++.+ ++++.++.|++||+++++
T Consensus 155 ~~~--------------~~~~~~~~~~------dg~~l~~~~~~~~~v~~~d~~~~~----------------------- 191 (391)
T 1l0q_A 155 SVG--------------RSPKGIAVTP------DGTKVYVANFDSMSISVIDTVTNS----------------------- 191 (391)
T ss_dssp ECC--------------SSEEEEEECT------TSSEEEEEETTTTEEEEEETTTTE-----------------------
T ss_pred ecC--------------CCcceEEECC------CCCEEEEEeCCCCEEEEEECCCCe-----------------------
Confidence 643 5678999999 78777 567788999999998742
Q ss_pred ceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEec---CCCeEEEEeCCCceeeeecchhhhhhhhc
Q 017194 265 RDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGG---NDKLVKVWDCSRFQGVQTSINNDLLIKNI 341 (375)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 341 (375)
....+. +...+.+++|+ |++++|++++ .++.|++||+.+++ .+..+.
T Consensus 192 -----------------~~~~~~-~~~~~~~~~~~---~~g~~l~~~~~~~~~~~v~~~d~~~~~---------~~~~~~ 241 (391)
T 1l0q_A 192 -----------------VIDTVK-VEAAPSGIAVN---PEGTKAYVTNVDKYFNTVSMIDTGTNK---------ITARIP 241 (391)
T ss_dssp -----------------EEEEEE-CSSEEEEEEEC---TTSSEEEEEEECSSCCEEEEEETTTTE---------EEEEEE
T ss_pred -----------------EEEEEe-cCCCccceEEC---CCCCEEEEEecCcCCCcEEEEECCCCe---------EEEEEe
Confidence 112222 35578999999 9999998887 68999999999874 333344
Q ss_pred ccccceeeeeecCCCCCcE-EEeeCCCeEEEEecC
Q 017194 342 NLNKKVNWLCTTPTESENL-VVCDTSKVVKVYSIS 375 (375)
Q Consensus 342 ~~~~~v~~~~~~~~~~~~l-~s~~~dg~v~iw~~~ 375 (375)
.|. .+.+++|+| ++++| ++++.|+.|++||++
T Consensus 242 ~~~-~~~~~~~s~-dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 242 VGP-DPAGIAVTP-DGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp CCS-SEEEEEECT-TSSEEEEEETTTTEEEEEETT
T ss_pred cCC-CccEEEEcc-CCCEEEEEcCCCCEEEEEECC
Confidence 443 478899999 88877 677899999999974
No 118
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2.7e-35 Score=237.33 Aligned_cols=297 Identities=10% Similarity=0.071 Sum_probs=200.4
Q ss_pred CCeeeecCCCc----eeEEEEecCCCC--EEEEeCCCCcEEEEecccC---ceeeEeeecCccEEEEEEeCCCCeEEEEc
Q 017194 7 KPRRLRGHKAT----ATCCIASRDRPG--FVASSGEDGCICWFDLRSK---DVQLVTDVGNGPVTSLCFKSGNEDIIYVS 77 (375)
Q Consensus 7 ~~~~l~~h~~~----i~~~~~~~~~~~--~l~s~~~d~~i~iw~~~~~---~~~~~~~~~~~~v~~l~~~~~~~~l~~~~ 77 (375)
.+.+|+.-.+. +.++.|-..+.+ .++++++ ..|++|+..++ +.+.+++.|+.+|..+.+.|+...|+...
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 105 (356)
T 2w18_A 27 LVSELKNPSGSCSVDVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVA 105 (356)
T ss_dssp EEEEECCCCSSCEEEEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEE
T ss_pred eeehhcCCCCCeEEEEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeee
Confidence 34455544433 445555443221 5777776 58999999998 78999999999999999999766555443
Q ss_pred CCC--eEEEEECCCCC---cccccccccCCCcceeEEEEcCCCCeEEEEe--CCCcEEEEeCc-CceeeeeEecCcccce
Q 017194 78 SGK--EVKSFDVHMPA---SWRPLESYNYNKEEINQIVCNPKSSFLACAD--DGGDVKIIDIR-QHCLYKSLRAGHSSIC 149 (375)
Q Consensus 78 ~d~--~i~iwd~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~-~~~~~~~~~~~~~~~v 149 (375)
-.+ .-.++-+.-.. .........+|...|..+ ++++++.+++ .|+.|++|++. +++.+..+. +|...+
T Consensus 106 ~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~-~~~~~v 181 (356)
T 2w18_A 106 LGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQF-LMPPEE 181 (356)
T ss_dssp ECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEE-ECCCSS
T ss_pred eccccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeec-cCCCce
Confidence 221 11122221110 011111112233344443 4565555543 59999999994 588888888 899999
Q ss_pred eEEEEee---CCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEE---
Q 017194 150 SSVQFIP---WKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKIC--- 223 (375)
Q Consensus 150 ~~~~~~~---~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l--- 223 (375)
+.++|+| +++ +|++++.|++|++||++++++++.+..+.. +...+.+++|+| ++.++
T Consensus 182 ~~l~fs~~~g~~~-~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~----------~v~~v~~vafSp------dG~~lvs~ 244 (356)
T 2w18_A 182 TILTFAEVQGMQE-ALLGTTIMNNIVIWNLKTGQLLKKMHIDDS----------YQASVCHKAYSE------MGLLFIVL 244 (356)
T ss_dssp CEEEEEEEETSTT-EEEEEETTSEEEEEETTTCCEEEEEECCC-------------CCCEEEEEEE------TTEEEEEE
T ss_pred eeEEeeccCCCCc-eEEEecCCCcEEEEECCCCcEEEEEcCCCc----------ceeeeEEEEECC------CCCEEEEe
Confidence 9999999 566 899999999999999999999999874300 123677889999 67766
Q ss_pred ---------EEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEE
Q 017194 224 ---------VVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAAS 294 (375)
Q Consensus 224 ---------~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 294 (375)
++|+.|++|++||..+++..... ......+|...+.
T Consensus 245 s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~-----------------------------------~~~~p~Gh~~~~l 289 (356)
T 2w18_A 245 SHPCAKESESLRSPVFQLIVINPKTTLSVGVM-----------------------------------LYCLPPGQAGRFL 289 (356)
T ss_dssp C------------CCEEEEEEETTTTEEEEEE-----------------------------------EECCCTTCCCCEE
T ss_pred ccCCCcceeeccCCCcEEEEEECCCCEEEEEE-----------------------------------EeeccCCCcceeE
Confidence 56778999999999875322100 0000135555544
Q ss_pred EEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhccccccee-eeeecCCCCCcEEEeeCCCeEEEEe
Q 017194 295 CVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVN-WLCTTPTESENLVVCDTSKVVKVYS 373 (375)
Q Consensus 295 ~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~s~~~dg~v~iw~ 373 (375)
+.. .++.++++++.|++|+|||+.++ +++..+.+|...+. .++|+| ||++|++|+.|++|+|||
T Consensus 290 sg~-----~sg~~lASgS~DgTIkIWDl~tG---------k~l~tL~gH~~~vvs~vafSP-DG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 290 EGD-----VKDHCAAAILTSGTIAIWDLLLG---------QCTALLPPVSDQHWSFVKWSG-TDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp EEE-----EETTEEEEEETTSCEEEEETTTC---------SEEEEECCC--CCCCEEEECS-SSSEEEEECTTSCEEEEE
T ss_pred ccc-----cCCCEEEEEcCCCcEEEEECCCC---------cEEEEecCCCCCeEEEEEECC-CCCEEEEEECCCcEEEec
Confidence 333 34779999999999999999999 66677788887765 589999 999999999999999999
Q ss_pred cC
Q 017194 374 IS 375 (375)
Q Consensus 374 ~~ 375 (375)
+.
T Consensus 355 ~~ 356 (356)
T 2w18_A 355 YS 356 (356)
T ss_dssp EC
T ss_pred CC
Confidence 74
No 119
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1e-34 Score=246.72 Aligned_cols=259 Identities=14% Similarity=0.133 Sum_probs=206.0
Q ss_pred EecccCceeeEeeecCccEEEEEEeCC---CCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEE
Q 017194 43 FDLRSKDVQLVTDVGNGPVTSLCFKSG---NEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLA 119 (375)
Q Consensus 43 w~~~~~~~~~~~~~~~~~v~~l~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 119 (375)
|+....+.+..+.+|...|++++|+|+ |++|++++.|+.|++||+.+... .....+.+|...|.+++|+|++++|+
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~ 102 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ-TIPKAQQMHTGPVLDVCWSDDGSKVF 102 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC-EEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc-eeEEEeccccCCEEEEEECcCCCEEE
Confidence 345566677888899999999999999 59999999999999999986321 22245667899999999999999999
Q ss_pred EEeCCCcEEEEeCcCceeeeeEecCcccceeEEEE--eeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCC
Q 017194 120 CADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQF--IPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAG 197 (375)
Q Consensus 120 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 197 (375)
+++.||.|++||+++++.+... .|...|.+++| +|++. +|++++.|+.|++||+++++.+..+...
T Consensus 103 s~~~dg~v~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~--------- 170 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQAIQIA--QHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSSNPMMVLQLP--------- 170 (368)
T ss_dssp EEETTSEEEEEETTTTEEEEEE--ECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCSSCSEEEECS---------
T ss_pred EEcCCCcEEEEEcCCCCceeec--cccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCCcEEEEEecC---------
Confidence 9999999999999998877644 59999999999 78887 7999999999999999999999888744
Q ss_pred cccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCc
Q 017194 198 QCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGG 277 (375)
Q Consensus 198 ~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~ 277 (375)
..+.++.+. ...+++++.++.+++|+++......
T Consensus 171 -----~~~~~~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~~--------------------------------- 204 (368)
T 3mmy_A 171 -----ERCYCADVI--------YPMAVVATAERGLIVYQLENQPSEF--------------------------------- 204 (368)
T ss_dssp -----SCEEEEEEE--------TTEEEEEEGGGCEEEEECSSSCEEE---------------------------------
T ss_pred -----CCceEEEec--------CCeeEEEeCCCcEEEEEeccccchh---------------------------------
Confidence 456666664 5588889999999999998642211
Q ss_pred ceeEeeeeecCCCccEEEEEEeecCCCCcE----EEEecCCCeEEEEeCCCceeeeecchhhhhhhhccccc--------
Q 017194 278 KRLHLDYSVGGHTAAASCVAFSMFGERGKY----LISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNK-------- 345 (375)
Q Consensus 278 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~----l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-------- 345 (375)
.. ....+...+..+.+. ++... +++++.||.|++|++...... ..+..+.+|..
T Consensus 205 ---~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 270 (368)
T 3mmy_A 205 ---RR--IESPLKHQHRCVAIF---KDKQNKPTGFALGSIEGRVAIHYINPPNPA------KDNFTFKCHRSNGTNTSAP 270 (368)
T ss_dssp ---EE--CCCSCSSCEEEEEEE---ECTTSCEEEEEEEETTSEEEEEESSCSCHH------HHSEEEECSEEC----CCC
T ss_pred ---hh--ccccccCCCceEEEc---ccCCCCCCeEEEecCCCcEEEEecCCCCcc------ccceeeeeeeccccccccc
Confidence 11 112233445566665 33333 999999999999999986321 22334444554
Q ss_pred ----ceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 346 ----KVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 346 ----~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
.|.+++|+| ++++|++++.||.|++||++
T Consensus 271 ~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~ 303 (368)
T 3mmy_A 271 QDIYAVNGIAFHP-VHGTLATVGSDGRFSFWDKD 303 (368)
T ss_dssp EEECCEEEEEECT-TTCCEEEEETTSCEEEEETT
T ss_pred ccccceEEEEEec-CCCEEEEEccCCeEEEEECC
Confidence 799999999 99999999999999999974
No 120
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-34 Score=251.12 Aligned_cols=264 Identities=13% Similarity=0.108 Sum_probs=210.1
Q ss_pred eecCCCceeEEEEecCCCCEE-EEeCCCCcEEEEecc--cCceeeEee--ecCccEEEEEEeCCCCeEEEEcCCCeEEEE
Q 017194 11 LRGHKATATCCIASRDRPGFV-ASSGEDGCICWFDLR--SKDVQLVTD--VGNGPVTSLCFKSGNEDIIYVSSGKEVKSF 85 (375)
Q Consensus 11 l~~h~~~i~~~~~~~~~~~~l-~s~~~d~~i~iw~~~--~~~~~~~~~--~~~~~v~~l~~~~~~~~l~~~~~d~~i~iw 85 (375)
..+|.+.|++++|+|+ +++| ++++.||.|++||+. +++.+..+. .|...|.+++|+|++++|++++.++.+++|
T Consensus 98 ~~~~~~~v~~~~~s~d-~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~ 176 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSD-ESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSI 176 (450)
T ss_dssp --CCCCCEEEEEECTT-SSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred CCccCCceEEEEEcCC-CCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEE
Confidence 3467889999999999 7775 999999999999999 888888876 567899999999999999999999999999
Q ss_pred ECCCCCccc-ccccccCCCcceeEEEEcCC---CCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcE
Q 017194 86 DVHMPASWR-PLESYNYNKEEINQIVCNPK---SSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWE 161 (375)
Q Consensus 86 d~~~~~~~~-~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 161 (375)
++.+++... ....+.+|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+..+|...|.+++|+ ++. +
T Consensus 177 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~-~ 254 (450)
T 2vdu_B 177 DINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDY-L 254 (450)
T ss_dssp ETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STT-E
T ss_pred ecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCC-E
Confidence 998766544 45566778999999999999 99999999999999999999888777333899999999999 888 7
Q ss_pred EEEeecCCeEEEeeCCCCCcceEEecCCCC--CC----------CCCCcccCCCceeEEeecCCccccCCCCEEEEEe-c
Q 017194 162 VISGGLDSKLVMWDFSKGRPNKIVNFGLPE--NN----------GNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK-G 228 (375)
Q Consensus 162 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~--~~----------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~-~ 228 (375)
|++++.|+.|++||+++++.+..+...... .. ...........+..++++| +++++++++ .
T Consensus 255 l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~------~~~~l~~~~~~ 328 (450)
T 2vdu_B 255 LLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK------NLPFVAFFVEA 328 (450)
T ss_dssp EEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS------SSSEEEEEETT
T ss_pred EEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC------CCCEEEEEECC
Confidence 999999999999999999988887632100 00 0000001235688999999 799999998 8
Q ss_pred CCcEEEEeC--CCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCc
Q 017194 229 DGVVDVINI--ESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGK 306 (375)
Q Consensus 229 dg~i~i~d~--~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~ 306 (375)
++.|++|++ .+ ...+..+..+..| ..|.+++|+ |++.
T Consensus 329 d~~i~iw~~~~~~-------------------------------------~~~l~~~~~~~~~-~~v~~~~~~---~~~~ 367 (450)
T 2vdu_B 329 TKCIIILEMSEKQ-------------------------------------KGDLALKQIITFP-YNVISLSAH---NDEF 367 (450)
T ss_dssp CSEEEEEEECSSS-------------------------------------TTCEEEEEEEECS-SCEEEEEEE---TTEE
T ss_pred CCeEEEEEeccCC-------------------------------------CCceeeccEeccC-CceEEEEec---CCcE
Confidence 999999999 33 1223455567777 789999999 8654
Q ss_pred EEEEecC------CCeEEEEeCCC
Q 017194 307 YLISGGN------DKLVKVWDCSR 324 (375)
Q Consensus 307 ~l~s~~~------dg~i~iwd~~~ 324 (375)
++++++. ++.|.+|.+..
T Consensus 368 ~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 368 QVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp EEEECCTTCCSSCCCSEEEEEEET
T ss_pred EEEEecccCCCCCCcceEEEEEEc
Confidence 4444443 45688887654
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.3e-33 Score=242.04 Aligned_cols=252 Identities=10% Similarity=0.075 Sum_probs=204.7
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEE-EEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEE-cCCCe
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFV-ASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYV-SSGKE 81 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l-~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~d~~ 81 (375)
+++.+..+.+|. .+.+++|+|+ +++| ++++.|+.|++||+.+++.+..+..+. .+.+++|+|++++|+++ +.++.
T Consensus 21 ~~~~~~~~~~~~-~~~~~~~s~d-g~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~ 97 (391)
T 1l0q_A 21 SNKVTATIPVGS-NPMGAVISPD-GTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASST 97 (391)
T ss_dssp TTEEEEEEECSS-SEEEEEECTT-SSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTE
T ss_pred CCeEEEEeecCC-CcceEEECCC-CCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCE
Confidence 455666777665 5899999999 6665 788899999999999999888887655 99999999999988654 46799
Q ss_pred EEEEECCCCCcccccccccCCCcceeEEEEcCCCCeE-EEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCc
Q 017194 82 VKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFL-ACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPW 160 (375)
Q Consensus 82 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 160 (375)
|++||+.+++....+. . ...+.+++|+|+++.+ ++++.++.|++||+.+++.+..+. .+ ..+.+++|+|+++.
T Consensus 98 v~v~d~~~~~~~~~~~---~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~-~~~~~~~~~~dg~~ 171 (391)
T 1l0q_A 98 LSVIDTTSNTVAGTVK---T-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS-VG-RSPKGIAVTPDGTK 171 (391)
T ss_dssp EEEEETTTTEEEEEEE---C-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CC-SSEEEEEECTTSSE
T ss_pred EEEEECCCCeEEEEEe---C-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEe-cC-CCcceEEECCCCCE
Confidence 9999999765443333 2 4578999999999977 677789999999999999988887 44 56799999999985
Q ss_pred EEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe---cCCcEEEEeC
Q 017194 161 EVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK---GDGVVDVINI 237 (375)
Q Consensus 161 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~---~dg~i~i~d~ 237 (375)
++++++.++.|++||+++++....+.. ...+.+++|+| +++++++++ .++.|++||+
T Consensus 172 l~~~~~~~~~v~~~d~~~~~~~~~~~~--------------~~~~~~~~~~~------~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 172 VYVANFDSMSISVIDTVTNSVIDTVKV--------------EAAPSGIAVNP------EGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEEC--------------SSEEEEEEECT------TSSEEEEEEECSSCCEEEEEET
T ss_pred EEEEeCCCCEEEEEECCCCeEEEEEec--------------CCCccceEECC------CCCEEEEEecCcCCCcEEEEEC
Confidence 557888899999999999888777763 36789999999 799888888 6899999999
Q ss_pred CCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEE-EEecCCCe
Q 017194 238 ESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYL-ISGGNDKL 316 (375)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l-~s~~~dg~ 316 (375)
.+++ .+..+..|. .+.+++|+ |++++| ++++.|+.
T Consensus 232 ~~~~----------------------------------------~~~~~~~~~-~~~~~~~s---~dg~~l~~s~~~d~~ 267 (391)
T 1l0q_A 232 GTNK----------------------------------------ITARIPVGP-DPAGIAVT---PDGKKVYVALSFXNT 267 (391)
T ss_dssp TTTE----------------------------------------EEEEEECCS-SEEEEEEC---TTSSEEEEEETTTTE
T ss_pred CCCe----------------------------------------EEEEEecCC-CccEEEEc---cCCCEEEEEcCCCCE
Confidence 8742 223444443 47889999 999877 67789999
Q ss_pred EEEEeCCCceee
Q 017194 317 VKVWDCSRFQGV 328 (375)
Q Consensus 317 i~iwd~~~~~~~ 328 (375)
|++||+.+++..
T Consensus 268 v~v~d~~~~~~~ 279 (391)
T 1l0q_A 268 VSVIDTATNTIT 279 (391)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEECCCCcEE
Confidence 999999998544
No 122
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.8e-34 Score=243.33 Aligned_cols=260 Identities=11% Similarity=0.104 Sum_probs=183.6
Q ss_pred EEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeE-EE
Q 017194 42 WFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFL-AC 120 (375)
Q Consensus 42 iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~ 120 (375)
||++.+.+.+.....|...|.+++|+|+|++|++|+.+ .+++|++.+.+.. .... ...+..+++.++++.+ ++
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~-~~~iw~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~ 76 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLK-SFEIYNVHPVAHI---MSQE--MRHLSKVRMLHRTNYVAFV 76 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSS-EEEEEEETTEEEE---EEEE--CSCCCEEEECTTSSEEEEE
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCC-EEEEEecCCccee---eeee--cCCeEEEEEcCCCCEEEEE
Confidence 56667777777788899999999999999999988866 5789998854322 1111 2357888899988887 56
Q ss_pred EeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCC-CcceEEecCCCCCCCCCCcc
Q 017194 121 ADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG-RPNKIVNFGLPENNGNAGQC 199 (375)
Q Consensus 121 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~ 199 (375)
++.|+.|++||+.+++.+..+. +...|.+++++++. ++++ .|+.|++||+.++ +.+..+..
T Consensus 77 ~~~d~~v~iWd~~~~~~~~~~~--~~~~v~~v~~~~~~---~~~~-~~~~i~i~d~~~~~~~~~~~~~------------ 138 (355)
T 3vu4_A 77 TGVKEVVHIWDDVKKQDVSRIK--VDAPVKDLFLSREF---IVVS-YGDVISVFKFGNPWKRITDDIR------------ 138 (355)
T ss_dssp CSSTTEEEEEETTTTEEEEEEE--CSSCEEEEEECSSE---EEEE-ETTEEEEEESSTTCCBSSCCEE------------
T ss_pred ECCccEEEEEECCCCcEEEEEE--CCCceEEEEEcCCE---EEEE-EcCEEEEEECCCCceeeEEecc------------
Confidence 7788999999999999999887 67799999998863 4444 4789999999987 66555441
Q ss_pred cCCCceeEEeecCCccccCCCCEEEE--EecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCc
Q 017194 200 YNPAFVHAIAIPDADMLDKTNKICVV--AKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGG 277 (375)
Q Consensus 200 ~~~~~v~~~~~~~~~~~~~~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~ 277 (375)
....+++++ ..+++ |+.+|.|++||+.++.......... ..
T Consensus 139 ----~~~~~~~s~--------~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~-------------------------~~ 181 (355)
T 3vu4_A 139 ----FGGVCEFSN--------GLLVYSNEFNLGQIHITKLQSSGSATTQDQGV-------------------------QQ 181 (355)
T ss_dssp ----EEEEEEEET--------TEEEEEESSCTTCEEEEECCC--------------------------------------
T ss_pred ----CCceEEEEc--------cEEEEeCCCcCcEEEEEECCCCCccccccccc-------------------------cc
Confidence 233445543 44555 5889999999999753221100000 00
Q ss_pred ceeEe-eeeecCCCccEEEEEEeecCCCCcEEEEecCCCe-EEEEeCCCceeeeecchhhhhhhhc-c-cccceeeeeec
Q 017194 278 KRLHL-DYSVGGHTAAASCVAFSMFGERGKYLISGGNDKL-VKVWDCSRFQGVQTSINNDLLIKNI-N-LNKKVNWLCTT 353 (375)
Q Consensus 278 ~~~~~-~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~ 353 (375)
..... +..+.+|...|.+++|+ |+|++|++|+.|++ |++||+.++ +.+..+. + |...|.+++|+
T Consensus 182 ~~~~p~~~~~~~h~~~v~~~~~s---~~g~~l~s~s~d~~~v~iwd~~~~---------~~~~~~~~g~h~~~v~~~~~s 249 (355)
T 3vu4_A 182 KAILGKGVLIKAHTNPIKMVRLN---RKSDMVATCSQDGTIIRVFKTEDG---------VLVREFRRGLDRADVVDMKWS 249 (355)
T ss_dssp -----CCEEECCCSSCEEEEEEC---TTSSEEEEEETTCSEEEEEETTTC---------CEEEEEECTTCCSCEEEEEEC
T ss_pred cccCcccEEEEccCCceEEEEEC---CCCCEEEEEeCCCCEEEEEECCCC---------cEEEEEEcCCCCCcEEEEEEC
Confidence 01122 56788999999999999 99999999999998 999999998 4445555 5 99999999999
Q ss_pred CCCCCcEEEeeCCCeEEEEecC
Q 017194 354 PTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 354 ~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
| ++++|++++.|+.|++|+++
T Consensus 250 ~-~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 250 T-DGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp T-TSCEEEEEETTCEEEEEESS
T ss_pred C-CCCEEEEEECCCEEEEEEcc
Confidence 9 99999999999999999974
No 123
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-34 Score=243.69 Aligned_cols=230 Identities=8% Similarity=0.036 Sum_probs=182.1
Q ss_pred EEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCc---------Cc
Q 017194 65 CFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIR---------QH 135 (375)
Q Consensus 65 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---------~~ 135 (375)
.+.+++..+++|+.||.|++||+.+++....+. ...|.++.++|+ +++++.|+.|++|+.. ++
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-----~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT-----TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE-----EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTC
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe-----cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCc
Confidence 344678899999999999999999876554444 356888889888 9999999999999765 44
Q ss_pred eeeeeEecCcccceeEEEEee--CCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCC
Q 017194 136 CLYKSLRAGHSSICSSVQFIP--WKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDA 213 (375)
Q Consensus 136 ~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 213 (375)
+.+..+..+|...|.+++|+| +++ ++++++.||+|++||+++++........ +...+.+++|+|
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~~~~~~~~~~~~------------~~~~i~~~~~~p- 180 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNTE-YFIWADNRGTIGFQSYEDDSQYIVHSAK------------SDVEYSSGVLHK- 180 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---CC-EEEEEETTCCEEEEESSSSCEEEEECCC------------SSCCCCEEEECT-
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCCC-EEEEEeCCCcEEEEECCCCcEEEEEecC------------CCCceEEEEECC-
Confidence 445455436778999999999 888 7999999999999999998886555433 345799999999
Q ss_pred ccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecC-CCcc
Q 017194 214 DMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGG-HTAA 292 (375)
Q Consensus 214 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 292 (375)
++.+|++|+.||.|++||++++... ...+.. |..+
T Consensus 181 -----dg~~lasg~~dg~i~iwd~~~~~~~---------------------------------------~~~~~~~h~~~ 216 (343)
T 3lrv_A 181 -----DSLLLALYSPDGILDVYNLSSPDQA---------------------------------------SSRFPVDEEAK 216 (343)
T ss_dssp -----TSCEEEEECTTSCEEEEESSCTTSC---------------------------------------CEECCCCTTSC
T ss_pred -----CCCEEEEEcCCCEEEEEECCCCCCC---------------------------------------ccEEeccCCCC
Confidence 8999999999999999999975211 124555 8999
Q ss_pred EEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhc---cccccee--eeeecCCCCCcEEEeeC-C
Q 017194 293 ASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNI---NLNKKVN--WLCTTPTESENLVVCDT-S 366 (375)
Q Consensus 293 v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~~~v~--~~~~~~~~~~~l~s~~~-d 366 (375)
|.+++|+ |++.+|++++ |+.|++||+++.+ .+..+. .|...+. +++|+| ++++|++++. |
T Consensus 217 v~~l~fs---~~g~~l~s~~-~~~v~iwd~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~s~~d 282 (343)
T 3lrv_A 217 IKEVKFA---DNGYWMVVEC-DQTVVCFDLRKDV---------GTLAYPTYTIPEFKTGTVTYDIDD-SGKNMIAYSNES 282 (343)
T ss_dssp EEEEEEC---TTSSEEEEEE-SSBEEEEETTSST---------TCBSSCCCBC-----CCEEEEECT-TSSEEEEEETTT
T ss_pred EEEEEEe---CCCCEEEEEe-CCeEEEEEcCCCC---------cceeecccccccccccceEEEECC-CCCEEEEecCCC
Confidence 9999999 9999999999 4599999999873 322222 2334444 599999 9999999988 9
Q ss_pred CeEEEEec
Q 017194 367 KVVKVYSI 374 (375)
Q Consensus 367 g~v~iw~~ 374 (375)
+.|++|++
T Consensus 283 ~~i~v~~~ 290 (343)
T 3lrv_A 283 NSLTIYKF 290 (343)
T ss_dssp TEEEEEEE
T ss_pred CcEEEEEE
Confidence 99999986
No 124
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=3.4e-34 Score=245.09 Aligned_cols=248 Identities=9% Similarity=0.023 Sum_probs=171.6
Q ss_pred EEecCCCCEEEEeCCCCcEEEEecccCcee-----eEeeecCccEEEEEEeC--------CCCeEEEEcCCCeEEEEECC
Q 017194 22 IASRDRPGFVASSGEDGCICWFDLRSKDVQ-----LVTDVGNGPVTSLCFKS--------GNEDIIYVSSGKEVKSFDVH 88 (375)
Q Consensus 22 ~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~-----~~~~~~~~~v~~l~~~~--------~~~~l~~~~~d~~i~iwd~~ 88 (375)
.+.++ +.+||+++.|++|+|||.++++.. ..+.+|.+.|++++|+| ++++|++++.|++|++||+.
T Consensus 96 ~~~~~-~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 96 SSPVY-SLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLT 174 (393)
T ss_dssp -CCEE-EEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEE
T ss_pred ecCCC-CCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECC
Confidence 33444 678999999999999999887653 34678999999999998 78999999999999999998
Q ss_pred CCCcccccccccCCCcceeEEEEcCCC-CeEEEEeCCCcEEEEeCcCceeeee-------------------------Ee
Q 017194 89 MPASWRPLESYNYNKEEINQIVCNPKS-SFLACADDGGDVKIIDIRQHCLYKS-------------------------LR 142 (375)
Q Consensus 89 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~-------------------------~~ 142 (375)
++.. +.....|..++.+++|+|++ .+|++++.|++|++||+++++.... ..
T Consensus 175 ~~~~---~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 251 (393)
T 4gq1_A 175 DEGP---ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSS 251 (393)
T ss_dssp TTEE---EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------
T ss_pred CCce---eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecc
Confidence 6533 33344567899999999987 4799999999999999987654322 12
Q ss_pred cCcccceeEEEEe-eCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCC-----CCcccCCCceeEEeecCCccc
Q 017194 143 AGHSSICSSVQFI-PWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGN-----AGQCYNPAFVHAIAIPDADML 216 (375)
Q Consensus 143 ~~~~~~v~~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~ 216 (375)
+|...+.++.|. |++. .+++++.|+++++||+..++....+.......... ..............+.|
T Consensus 252 -~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 325 (393)
T 4gq1_A 252 -GIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHP---- 325 (393)
T ss_dssp -CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECS----
T ss_pred -cccccceeeeeecCCCC-EEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEcc----
Confidence 577788999987 6777 79999999999999998877655544221000000 00000001111222333
Q ss_pred cCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEE
Q 017194 217 DKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCV 296 (375)
Q Consensus 217 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 296 (375)
..++.++++|+.||.|++||+.++. ....+.+|..+|.++
T Consensus 326 ~~~~~~~~sgs~Dg~V~lwd~~~~~----------------------------------------~~~~~~~~~~~V~sv 365 (393)
T 4gq1_A 326 RYMDYFATAHSQHGLIQLINTYEKD----------------------------------------SNSIPIQLGMPIVDF 365 (393)
T ss_dssp SCTTEEEEEETTTTEEEEEETTCTT----------------------------------------CCEEEEECSSCEEEE
T ss_pred CCCCEEEEEECCCCEEEEEECCCCc----------------------------------------EEEEecCCCCcEEEE
Confidence 2245577788899999999998752 222445678899999
Q ss_pred EEeecCCCCcEEEEecCCCeEEEEeCC
Q 017194 297 AFSMFGERGKYLISGGNDKLVKVWDCS 323 (375)
Q Consensus 297 ~~s~~~~~~~~l~s~~~dg~i~iwd~~ 323 (375)
+|+ |||++||+++.|| +.+|.+.
T Consensus 366 afs---pdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 366 CWH---QDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EEC---TTSSEEEEEESSE-EEEEEEG
T ss_pred EEc---CCCCEEEEEeCCC-eEEEEEe
Confidence 999 9999999999776 6666554
No 125
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=100.00 E-value=1.1e-31 Score=237.55 Aligned_cols=325 Identities=10% Similarity=0.061 Sum_probs=241.2
Q ss_pred EEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEEC--CCCCcccccccc
Q 017194 22 IASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDV--HMPASWRPLESY 99 (375)
Q Consensus 22 ~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~--~~~~~~~~~~~~ 99 (375)
.++|+ +.++++++.|++|.+||..+++.+.++..+.. +..++|+|+|++|++++.|+.|++||+ .+++.... +
T Consensus 144 ~~~p~-~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~---i 218 (543)
T 1nir_A 144 DLDLP-NLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAE---I 218 (543)
T ss_dssp CCCGG-GEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEE---E
T ss_pred ccCCC-CEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEE---E
Confidence 48888 78999999999999999999999999884433 889999999999999999999999999 66544333 3
Q ss_pred cCCCcceeEEEEcC----CCCeEEEEe-CCCcEEEEeCcCceeeeeEecCc-----------ccceeEEEEeeCCCcEEE
Q 017194 100 NYNKEEINQIVCNP----KSSFLACAD-DGGDVKIIDIRQHCLYKSLRAGH-----------SSICSSVQFIPWKPWEVI 163 (375)
Q Consensus 100 ~~~~~~v~~~~~~~----~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~~l~ 163 (375)
. +...+..++|+| +++++++++ .+++|.+||..+++++..+. .+ ...+.++.++|+++.+++
T Consensus 219 ~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~-~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~v 296 (543)
T 1nir_A 219 K-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS-TRGMTVDTQTYHPEPRVAAIIASHEHPEFIV 296 (543)
T ss_dssp E-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEE-CCEECSSSCCEESCCCEEEEEECSSSSEEEE
T ss_pred e-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeec-ccCcccCccccccCCceEEEEECCCCCEEEE
Confidence 3 245679999999 999999888 48999999999999988886 32 226889999999886788
Q ss_pred EeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe-cCCcEEEEeCCCcce
Q 017194 164 SGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK-GDGVVDVINIESELN 242 (375)
Q Consensus 164 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~ 242 (375)
+...++.|.+||+.+.+.+...... +...+..++|+| +++++++++ .++.|.+||+.+++.
T Consensus 297 s~~~~g~i~vvd~~~~~~l~~~~i~------------~~~~~~~~~~sp------dg~~l~va~~~~~~v~v~D~~tg~l 358 (543)
T 1nir_A 297 NVKETGKVLLVNYKDIDNLTVTSIG------------AAPFLHDGGWDS------SHRYFMTAANNSNKVAVIDSKDRRL 358 (543)
T ss_dssp EETTTTEEEEEECTTSSSCEEEEEE------------CCSSCCCEEECT------TSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred EECCCCeEEEEEecCCCcceeEEec------------cCcCccCceECC------CCCEEEEEecCCCeEEEEECCCCeE
Confidence 8889999999999987766522222 235678899999 799776554 689999999999876
Q ss_pred eecccccCCCCC-Ccee-eccc-ccceeee-------eeeecCCc----ceeEeeeeecCCCccEEEEEEeecCCCCcEE
Q 017194 243 ISRSKSTTKPLK-GSQS-TSKV-NIRDAEM-------EILDQSGG----KRLHLDYSVGGHTAAASCVAFSMFGERGKYL 308 (375)
Q Consensus 243 ~~~~~~~~~~~~-~~~~-~s~~-g~~~~~~-------~~~~~~~~----~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l 308 (375)
.........+.. .... ++|+ |..+++. ..++.... ..++++.++.+|...+..++++ |++++|
T Consensus 359 ~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~---pdg~~l 435 (543)
T 1nir_A 359 SALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTH---PKSSHL 435 (543)
T ss_dssp EEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECC---TTCCEE
T ss_pred EEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcC---CCCCcE
Confidence 655442211111 1222 4676 4444432 12222221 1267788899998888999999 999999
Q ss_pred EEec-------CCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEe-----eCCCeEEEEecC
Q 017194 309 ISGG-------NDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVC-----DTSKVVKVYSIS 375 (375)
Q Consensus 309 ~s~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-----~~dg~v~iw~~~ 375 (375)
++++ .+++|.+||+.+.+.....-.-.....+..+...+..++|+| +|+.|+++ +.|+.|.|||.+
T Consensus 436 ~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~g~~~~~s~~~~~~~~~~i~v~D~~ 513 (543)
T 1nir_A 436 YVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNK-RGDEVWFSVWNGKNDSSALVVVDDK 513 (543)
T ss_dssp EECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECS-SSSEEEEEEECCTTSCCEEEEEETT
T ss_pred EEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCC-CCCEEEEEeecCCCCCCeEEEEECC
Confidence 9987 277999999998843210000000011245678899999999 89888865 247999999963
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.2e-31 Score=232.97 Aligned_cols=244 Identities=13% Similarity=0.105 Sum_probs=204.3
Q ss_pred eeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEE-EcCCCeEEEEECC
Q 017194 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIY-VSSGKEVKSFDVH 88 (375)
Q Consensus 10 ~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~-~~~d~~i~iwd~~ 88 (375)
.+.+|.+.|.+++|+|+ ++++++++.|+.|++||+++++.+..+..|...+.+++|+|+++.+++ ++.++.|++||++
T Consensus 164 ~~~~~~~~v~~~~~~~~-~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~ 242 (433)
T 3bws_A 164 KYKKKLGFVETISIPEH-NELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRK 242 (433)
T ss_dssp HHHTTCCEEEEEEEGGG-TEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cccccCCceeEEEEcCC-CEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECC
Confidence 45689999999999998 899999999999999999999999999889999999999999998854 4578999999998
Q ss_pred CCCcccccccccCCCcceeEEEEcCCCCeEEEEe--------CCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCc
Q 017194 89 MPASWRPLESYNYNKEEINQIVCNPKSSFLACAD--------DGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPW 160 (375)
Q Consensus 89 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 160 (375)
+++....+ .. ...+.+++|+|+++++++++ .|+.|++||+.+++.+..+. |...+.+++|+|+++.
T Consensus 243 ~~~~~~~~---~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~ 316 (433)
T 3bws_A 243 TKLEIRKT---DK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG--PPGNKRHIVSGNTENK 316 (433)
T ss_dssp TTEEEEEC---CC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE--EEECEEEEEECSSTTE
T ss_pred CCcEEEEe---cC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc--CCCCcceEEECCCCCE
Confidence 76543333 22 35699999999999999888 48899999999998877765 6678999999999986
Q ss_pred EEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEec------------
Q 017194 161 EVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKG------------ 228 (375)
Q Consensus 161 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~------------ 228 (375)
++++++.++.|++||+.+++....+.. ...+.+++|+| +++++++++.
T Consensus 317 l~~~~~~~~~v~v~d~~~~~~~~~~~~--------------~~~~~~~~~s~------dg~~l~~~~~~~~~~~~~~~~~ 376 (433)
T 3bws_A 317 IYVSDMCCSKIEVYDLKEKKVQKSIPV--------------FDKPNTIALSP------DGKYLYVSCRGPNHPTEGYLKK 376 (433)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEEC--------------SSSEEEEEECT------TSSEEEEEECCCCCTTTCTTSC
T ss_pred EEEEecCCCEEEEEECCCCcEEEEecC--------------CCCCCeEEEcC------CCCEEEEEecCCCccccccccc
Confidence 678889999999999999888877763 46789999999 7998888876
Q ss_pred ---CCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCC
Q 017194 229 ---DGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERG 305 (375)
Q Consensus 229 ---dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~ 305 (375)
||.|++||+.+++ .+..+.. ...+.+++|+ |+|
T Consensus 377 g~~dg~v~~~d~~~~~----------------------------------------~~~~~~~-~~~~~~~~~s---~dg 412 (433)
T 3bws_A 377 GLVLGKVYVIDTTTDT----------------------------------------VKEFWEA-GNQPTGLDVS---PDN 412 (433)
T ss_dssp CSSCCEEEEEETTTTE----------------------------------------EEEEEEC-SSSEEEEEEC---TTS
T ss_pred cccceEEEEEECCCCc----------------------------------------EEEEecC-CCCCceEEEc---CCC
Confidence 5799999998742 2223333 3568999999 999
Q ss_pred cEEEEec-CCCeEEEEeCCC
Q 017194 306 KYLISGG-NDKLVKVWDCSR 324 (375)
Q Consensus 306 ~~l~s~~-~dg~i~iwd~~~ 324 (375)
++|++++ .|+.|++|+++.
T Consensus 413 ~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 413 RYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CEEEEEETTTTEEEEEEETT
T ss_pred CEEEEEECCCCeEEEEEecC
Confidence 9998776 499999999864
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.9e-31 Score=215.06 Aligned_cols=252 Identities=11% Similarity=0.011 Sum_probs=175.5
Q ss_pred CCCeeeecCCCceeEEEEecCCCCEEEEeCCCC---cEEEEecccC----ceeeEeeecCccEEEEEEeCCCCeEEEEc-
Q 017194 6 AKPRRLRGHKATATCCIASRDRPGFVASSGEDG---CICWFDLRSK----DVQLVTDVGNGPVTSLCFKSGNEDIIYVS- 77 (375)
Q Consensus 6 ~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~---~i~iw~~~~~----~~~~~~~~~~~~v~~l~~~~~~~~l~~~~- 77 (375)
+++.++++|+.+|..+.+.||..+++..+-.+= .|+..-+... .....-.+|...|..+ ++++.+.+++
T Consensus 77 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~ 153 (356)
T 2w18_A 77 EKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGT 153 (356)
T ss_dssp EEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEESS
T ss_pred eeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEeccc
Confidence 678899999999999999997555544442221 1111111111 1112223344445444 5666555543
Q ss_pred -CCCeEEEEECCCCCcccccccccCCCcceeEEEEcC---CCCeEEEEeCCCcEEEEeCcCceeeeeEecCcc---ccee
Q 017194 78 -SGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNP---KSSFLACADDGGDVKIIDIRQHCLYKSLRAGHS---SICS 150 (375)
Q Consensus 78 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~---~~v~ 150 (375)
.|+.|++|++... .+.+..+.+|...+..++|++ ++.+|++++.|++|++||+++++.++++. +|. ..+.
T Consensus 154 g~d~~V~~~~~s~d--G~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~-g~~~~v~~v~ 230 (356)
T 2w18_A 154 LSDQQVEVMTFAED--GGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMH-IDDSYQASVC 230 (356)
T ss_dssp STTCEEEEEEECTT--SCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEE-CCC---CCCE
T ss_pred CCCCcEEEEEECCC--CceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEc-CCCcceeeeE
Confidence 5899999999542 234445556788899999999 77999999999999999999999999998 654 3677
Q ss_pred EEEEeeCCCcEE------------EEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccC
Q 017194 151 SVQFIPWKPWEV------------ISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDK 218 (375)
Q Consensus 151 ~~~~~~~~~~~l------------~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 218 (375)
+++|+|++. ++ ++|+.|++|++||..+++.+..+....|+. |.....+..+
T Consensus 231 ~vafSpdG~-~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~G--------h~~~~lsg~~-------- 293 (356)
T 2w18_A 231 HKAYSEMGL-LFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPG--------QAGRFLEGDV-------- 293 (356)
T ss_dssp EEEEEETTE-EEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTT--------CCCCEEEEEE--------
T ss_pred EEEECCCCC-EEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCC--------CcceeEcccc--------
Confidence 889999997 44 678899999999999998877654321110 1122222222
Q ss_pred CCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEE-EEE
Q 017194 219 TNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAAS-CVA 297 (375)
Q Consensus 219 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~ 297 (375)
++.++++++.|++|+|||+.++ +++.++.+|...+. .++
T Consensus 294 sg~~lASgS~DgTIkIWDl~tG----------------------------------------k~l~tL~gH~~~vvs~va 333 (356)
T 2w18_A 294 KDHCAAAILTSGTIAIWDLLLG----------------------------------------QCTALLPPVSDQHWSFVK 333 (356)
T ss_dssp ETTEEEEEETTSCEEEEETTTC----------------------------------------SEEEEECCC--CCCCEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCC----------------------------------------cEEEEecCCCCCeEEEEE
Confidence 4778999999999999999985 45567888877655 589
Q ss_pred EeecCCCCcEEEEecCCCeEEEEeCC
Q 017194 298 FSMFGERGKYLISGGNDKLVKVWDCS 323 (375)
Q Consensus 298 ~s~~~~~~~~l~s~~~dg~i~iwd~~ 323 (375)
|+ |||++|++|+.|++|+|||+.
T Consensus 334 fS---PDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 334 WS---GTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp EC---SSSSEEEEECTTSCEEEEEEC
T ss_pred EC---CCCCEEEEEECCCcEEEecCC
Confidence 99 999999999999999999963
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=100.00 E-value=1.9e-31 Score=229.26 Aligned_cols=279 Identities=12% Similarity=0.032 Sum_probs=213.9
Q ss_pred CCceeEEEEecCCCCEEEEeC----CCC----cEEEEec--ccCcee--eEeeecCccEEEEEEeC--------------
Q 017194 15 KATATCCIASRDRPGFVASSG----EDG----CICWFDL--RSKDVQ--LVTDVGNGPVTSLCFKS-------------- 68 (375)
Q Consensus 15 ~~~i~~~~~~~~~~~~l~s~~----~d~----~i~iw~~--~~~~~~--~~~~~~~~~v~~l~~~~-------------- 68 (375)
...+...+|.+.+.+++++|+ .+| .++|||+ .+++.+ ..+.+|...+..+++++
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGA 141 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 346777889898667887876 567 8999999 888876 55788888888777764
Q ss_pred CCCeEEEEcCC------CeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCC---cEEEEeCcCceeee
Q 017194 69 GNEDIIYVSSG------KEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGG---DVKIIDIRQHCLYK 139 (375)
Q Consensus 69 ~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~ 139 (375)
.+..++.++.+ +.|++||+... ....+..|...+.+++|+|++++|++++.++ .|++||+++++..
T Consensus 142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g~----~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~- 216 (415)
T 2hqs_A 142 FRTRIAYVVQTNGGQFPYELRVSDYDGY----NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR- 216 (415)
T ss_dssp TTCEEEEEEECSSSSCCEEEEEEETTSC----SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-
T ss_pred CCCEEEEEEecCCCCccceEEEEcCCCC----CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-
Confidence 15566666654 79999999743 2334445678999999999999999999875 9999999988775
Q ss_pred eEecCcccceeEEEEeeCCCcEEEEeecCC--eEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCcccc
Q 017194 140 SLRAGHSSICSSVQFIPWKPWEVISGGLDS--KLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLD 217 (375)
Q Consensus 140 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 217 (375)
.+. .|...+.+++|+|+|+.++++++.++ .|++||+++++. ..+. . +...+.+++|+|
T Consensus 217 ~l~-~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~-~------------~~~~~~~~~~sp----- 276 (415)
T 2hqs_A 217 QVA-SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVT-D------------GRSNNTEPTWFP----- 276 (415)
T ss_dssp EEE-CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECC-C------------CSSCEEEEEECT-----
T ss_pred Eee-cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCc-C------------CCCcccceEECC-----
Confidence 455 68889999999999984444676655 499999988765 3332 2 356789999999
Q ss_pred CCCCEEEEEec-CC--cEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEE
Q 017194 218 KTNKICVVAKG-DG--VVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAAS 294 (375)
Q Consensus 218 ~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 294 (375)
+++.|++++. ++ .|.+||+.++. ...+..+...+.
T Consensus 277 -dg~~l~~~s~~~g~~~i~~~d~~~~~-----------------------------------------~~~l~~~~~~~~ 314 (415)
T 2hqs_A 277 -DSQNLAFTSDQAGRPQVYKVNINGGA-----------------------------------------PQRITWEGSQNQ 314 (415)
T ss_dssp -TSSEEEEEECTTSSCEEEEEETTSSC-----------------------------------------CEECCCSSSEEE
T ss_pred -CCCEEEEEECCCCCcEEEEEECCCCC-----------------------------------------EEEEecCCCccc
Confidence 8998888876 44 67777887642 113444567888
Q ss_pred EEEEeecCCCCcEEEEecCC---CeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCC---e
Q 017194 295 CVAFSMFGERGKYLISGGND---KLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSK---V 368 (375)
Q Consensus 295 ~~~~s~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg---~ 368 (375)
.++|+ |+|++|++++.+ ..|++||+.+++ . ..+..+. .+..++|+| +|++|++++.|+ .
T Consensus 315 ~~~~s---pdG~~l~~~~~~~g~~~i~~~d~~~~~---------~-~~l~~~~-~~~~~~~sp-dg~~l~~~s~~~~~~~ 379 (415)
T 2hqs_A 315 DADVS---SDGKFMVMVSSNGGQQHIAKQDLATGG---------V-QVLSSTF-LDETPSLAP-NGTMVIYSSSQGMGSV 379 (415)
T ss_dssp EEEEC---TTSSEEEEEEECSSCEEEEEEETTTCC---------E-EECCCSS-SCEEEEECT-TSSEEEEEEEETTEEE
T ss_pred CeEEC---CCCCEEEEEECcCCceEEEEEECCCCC---------E-EEecCCC-CcCCeEEcC-CCCEEEEEEcCCCccE
Confidence 99999 999999988764 589999999873 2 2233443 889999999 999999988776 7
Q ss_pred EEEEecC
Q 017194 369 VKVYSIS 375 (375)
Q Consensus 369 v~iw~~~ 375 (375)
|++|++.
T Consensus 380 l~~~d~~ 386 (415)
T 2hqs_A 380 LNLVSTD 386 (415)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 9999863
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.98 E-value=2.7e-30 Score=222.14 Aligned_cols=269 Identities=10% Similarity=0.081 Sum_probs=206.8
Q ss_pred cCCCCC--eeeecCCCceeEEEEecCC-------------CCEEEEeCCC------CcEEEEecccCceeeEeeecCccE
Q 017194 3 DAEAKP--RRLRGHKATATCCIASRDR-------------PGFVASSGED------GCICWFDLRSKDVQLVTDVGNGPV 61 (375)
Q Consensus 3 ~~~~~~--~~l~~h~~~i~~~~~~~~~-------------~~~l~s~~~d------~~i~iw~~~~~~~~~~~~~~~~~v 61 (375)
.+++.+ ..+.+|...+..+++.+.+ +..++.++.+ +.|++||+. +.....+..|...+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v 181 (415)
T 2hqs_A 103 APGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPL 181 (415)
T ss_dssp STTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCE
T ss_pred CCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcc
Confidence 344554 4588898888888777510 3455555443 799999997 45567788899999
Q ss_pred EEEEEeCCCCeEEEEcCCC---eEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEE-EEeCCCc--EEEEeCcCc
Q 017194 62 TSLCFKSGNEDIIYVSSGK---EVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLA-CADDGGD--VKIIDIRQH 135 (375)
Q Consensus 62 ~~l~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~--i~iwd~~~~ 135 (375)
.+++|+|+|++|++++.++ .|++||+.+++.. .+..|...+.+++|+|+++.|+ +++.++. |++||+.++
T Consensus 182 ~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~----~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~ 257 (415)
T 2hqs_A 182 MSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR----QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASG 257 (415)
T ss_dssp EEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE----EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC
T ss_pred eeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE----EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCC
Confidence 9999999999999999875 9999999976542 2334567899999999999888 6665554 999999887
Q ss_pred eeeeeEecCcccceeEEEEeeCCCcEEEEeec-CC--eEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecC
Q 017194 136 CLYKSLRAGHSSICSSVQFIPWKPWEVISGGL-DS--KLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPD 212 (375)
Q Consensus 136 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 212 (375)
+. ..+. .|...+.+++|+|+|+ .|++++. ++ .|++||+.+++.. .+.. +...+.+++|+|
T Consensus 258 ~~-~~l~-~~~~~~~~~~~spdg~-~l~~~s~~~g~~~i~~~d~~~~~~~-~l~~-------------~~~~~~~~~~sp 320 (415)
T 2hqs_A 258 QI-RQVT-DGRSNNTEPTWFPDSQ-NLAFTSDQAGRPQVYKVNINGGAPQ-RITW-------------EGSQNQDADVSS 320 (415)
T ss_dssp CE-EECC-CCSSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTSSCCE-ECCC-------------SSSEEEEEEECT
T ss_pred CE-EeCc-CCCCcccceEECCCCC-EEEEEECCCCCcEEEEEECCCCCEE-EEec-------------CCCcccCeEECC
Confidence 76 4566 6888999999999998 5666664 45 6888898877643 2221 246788999999
Q ss_pred CccccCCCCEEEEEecC---CcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCC
Q 017194 213 ADMLDKTNKICVVAKGD---GVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGH 289 (375)
Q Consensus 213 ~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (375)
++++|++++.+ ..|++||+.+++. ..+..+
T Consensus 321 ------dG~~l~~~~~~~g~~~i~~~d~~~~~~-----------------------------------------~~l~~~ 353 (415)
T 2hqs_A 321 ------DGKFMVMVSSNGGQQHIAKQDLATGGV-----------------------------------------QVLSST 353 (415)
T ss_dssp ------TSSEEEEEEECSSCEEEEEEETTTCCE-----------------------------------------EECCCS
T ss_pred ------CCCEEEEEECcCCceEEEEEECCCCCE-----------------------------------------EEecCC
Confidence 89999888764 5899999987421 134444
Q ss_pred CccEEEEEEeecCCCCcEEEEecCCC---eEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecC
Q 017194 290 TAAASCVAFSMFGERGKYLISGGNDK---LVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTP 354 (375)
Q Consensus 290 ~~~v~~~~~s~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 354 (375)
. .+.+++|+ |+|++|++++.|+ .|++||+... ....+..|.+.|.+++|+|
T Consensus 354 ~-~~~~~~~s---pdg~~l~~~s~~~~~~~l~~~d~~g~----------~~~~l~~~~~~v~~~~~~~ 407 (415)
T 2hqs_A 354 F-LDETPSLA---PNGTMVIYSSSQGMGSVLNLVSTDGR----------FKARLPATDGQVKFPAWSP 407 (415)
T ss_dssp S-SCEEEEEC---TTSSEEEEEEEETTEEEEEEEETTSC----------CEEECCCSSSEEEEEEECC
T ss_pred C-CcCCeEEc---CCCCEEEEEEcCCCccEEEEEECCCC----------cEEEeeCCCCCCcCCcccc
Confidence 3 78999999 9999999988877 8999999864 3456788999999999999
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=6.1e-29 Score=230.25 Aligned_cols=320 Identities=9% Similarity=0.047 Sum_probs=227.5
Q ss_pred CCceeEEEEecCCCCEEEEeCC-CC-----cEEEEecccCceeeEeeecCc------------------------cEEEE
Q 017194 15 KATATCCIASRDRPGFVASSGE-DG-----CICWFDLRSKDVQLVTDVGNG------------------------PVTSL 64 (375)
Q Consensus 15 ~~~i~~~~~~~~~~~~l~s~~~-d~-----~i~iw~~~~~~~~~~~~~~~~------------------------~v~~l 64 (375)
...|.+++|+|| |++|++++. |+ .|++||+.+++....+..+.. .|.++
T Consensus 36 ~~~~~~~~~Spd-G~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPD-GSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTT-SSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecC-CCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 456999999999 899999888 88 899999999987766655432 37899
Q ss_pred EEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecC
Q 017194 65 CFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAG 144 (375)
Q Consensus 65 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 144 (375)
+|+|||++|++++. +.|++||+.++.. .....+..|...+..++|+|||++|+.++. +.|++||+.+++...... .
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~-~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~-~ 190 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGK-AAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTA-D 190 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCST-TSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCC-C
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCc-ceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEecc-C
Confidence 99999999999886 9999999987620 022234445678999999999999999874 689999999887665444 3
Q ss_pred cccc----------------eeEEEEeeCCCcEEEEeecCC---------------------------------eEEEee
Q 017194 145 HSSI----------------CSSVQFIPWKPWEVISGGLDS---------------------------------KLVMWD 175 (375)
Q Consensus 145 ~~~~----------------v~~~~~~~~~~~~l~~~~~d~---------------------------------~i~~wd 175 (375)
+... +.+++|+|+|+ .|++++.|+ .|++||
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~-~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDS-AIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSS-CEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred CccceeccccceeeeeccccccceEECCCCC-EEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 3322 47899999999 577776655 788999
Q ss_pred CCC-CCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEec-----CCcEEEEeCCCcceeeccccc
Q 017194 176 FSK-GRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKG-----DGVVDVINIESELNISRSKST 249 (375)
Q Consensus 176 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~ 249 (375)
+.+ ++........ .+...+..++| | +++.|++++. +..|++||+.+++........
T Consensus 270 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~-p------Dg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~ 331 (741)
T 2ecf_A 270 PAEQAQTQWIDLGK-----------EQDIYLARVNW-R------DPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHET 331 (741)
T ss_dssp SSTTCCCEEECCCS-----------CSSEEEEEEEE-E------ETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEE
T ss_pred CCCCCceEEecCCC-----------CcceEEEEEEe-C------CCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcC
Confidence 987 7654332110 03467899999 9 7999887764 568999999987765544333
Q ss_pred CCC---CCCceeecccccceeeee------eeecCCcceeEeeeeecCCCccEEEE-EEeecCCCCcEEE-EecCCC--e
Q 017194 250 TKP---LKGSQSTSKVNIRDAEME------ILDQSGGKRLHLDYSVGGHTAAASCV-AFSMFGERGKYLI-SGGNDK--L 316 (375)
Q Consensus 250 ~~~---~~~~~~~s~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~v~~~-~~s~~~~~~~~l~-s~~~dg--~ 316 (375)
... ....++|+|||+.++... .+..... .. ...+..|...+..+ .|+ |+|+.|+ +++.++ .
T Consensus 332 ~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~--~~-~~~l~~~~~~v~~~~~~s---~dg~~l~~~~~~~~~~~ 405 (741)
T 2ecf_A 332 SPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSK--GK-AAALTHGNWSVDELLAVD---EKAGLAYFRAGIESARE 405 (741)
T ss_dssp CSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSS--SC-EEESCCSSSCEEEEEEEE---TTTTEEEEEECSSCTTC
T ss_pred CCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCC--CC-eeeeeecceEEEeEeEEe---CCCCEEEEEEeCCCCce
Confidence 222 346789999999555421 1111111 11 44666777788887 599 9998765 555555 8
Q ss_pred EEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCC----CeEEEEec
Q 017194 317 VKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTS----KVVKVYSI 374 (375)
Q Consensus 317 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d----g~v~iw~~ 374 (375)
++||++.... .....+.. ...+..++|+| |+++|+....+ ..+.+|+.
T Consensus 406 ~~l~~~~~~g--------~~~~~l~~-~~~~~~~~~sp-dg~~l~~~~~~~~~p~~~~l~~~ 457 (741)
T 2ecf_A 406 SQIYAVPLQG--------GQPQRLSK-APGMHSASFAR-NASVYVDSWSNNSTPPQIELFRA 457 (741)
T ss_dssp BEEEEEETTC--------CCCEECCC-SCSEEEEEECT-TSSEEEEEEEETTEEEEEEEEET
T ss_pred EEEEEEEcCC--------CCeeeccc-CCCceEEEECC-CCCEEEEEecCCCCCCeEEEEEc
Confidence 9999986421 21222233 55678999999 89888776433 46777764
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.97 E-value=1.3e-27 Score=200.06 Aligned_cols=292 Identities=10% Similarity=0.054 Sum_probs=200.8
Q ss_pred EEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcC-CCeEEEEECCCCCccccccccc
Q 017194 22 IASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSS-GKEVKSFDVHMPASWRPLESYN 100 (375)
Q Consensus 22 ~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~ 100 (375)
.|.++.+..+++++.++.|.+||..+++....+..+...+ .++|+|+++++++++. ++.|.+||+.+++.. .....
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~--~~~~~ 80 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK--VVAIQ 80 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE--EEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee--EEecc
Confidence 4566645668888999999999999999888887766777 9999999997776665 789999999876541 22333
Q ss_pred CCCcceeEEEEcCCCCeEEEEeCCC---cEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCe-EEEeeC
Q 017194 101 YNKEEINQIVCNPKSSFLACADDGG---DVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSK-LVMWDF 176 (375)
Q Consensus 101 ~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-i~~wd~ 176 (375)
.+..+..+++|+|++++++++..++ .|.+||+.+++.+..+. ......+++|+|++++++++...++. |.+|++
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 81 EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP--IPYDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE--CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE--CCCCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 3344555599999999999655553 89999999999888887 34557999999999865666666688 999999
Q ss_pred CCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEE-ecCCcEEEEeCCCcceeecccccCCCCCC
Q 017194 177 SKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVA-KGDGVVDVINIESELNISRSKSTTKPLKG 255 (375)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 255 (375)
.....+...... .......+..++|+| ++++++++ ..++.|.+||+.+++..
T Consensus 159 ~~~g~~~~~~~~---------~~~~~~~~~~~~~sp------dg~~l~v~~~~~~~v~v~d~~~~~~~------------ 211 (331)
T 3u4y_A 159 DADGVLFDTGQE---------FISGGTRPFNITFTP------DGNFAFVANLIGNSIGILETQNPENI------------ 211 (331)
T ss_dssp CTTCCEEEEEEE---------EECSSSSEEEEEECT------TSSEEEEEETTTTEEEEEECSSTTSC------------
T ss_pred CCCCcEeecCCc---------cccCCCCccceEECC------CCCEEEEEeCCCCeEEEEECCCCccc------------
Confidence 865443222100 000234578999999 78866555 46889999999875320
Q ss_pred ceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEe-cCCCeEEEEeCCCceeeeecchh
Q 017194 256 SQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISG-GNDKLVKVWDCSRFQGVQTSINN 334 (375)
Q Consensus 256 ~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~ 334 (375)
+.+..+.. ...+..++|+ |+|++|+.+ ..++.|.+||+.+++........
T Consensus 212 -------------------------~~~~~~~~-~~~~~~~~~s---pdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~ 262 (331)
T 3u4y_A 212 -------------------------TLLNAVGT-NNLPGTIVVS---RDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFG 262 (331)
T ss_dssp -------------------------EEEEEEEC-SSCCCCEEEC---TTSSEEEEECSSEEEEEEEETTTTEEEEEEEEE
T ss_pred -------------------------ceeeeccC-CCCCceEEEC---CCCCEEEEEEcCCCEEEEEECCCCceeeecccc
Confidence 11223332 3556789999 999976655 45788999999987542100000
Q ss_pred hhhhhhcccccceeeeeecCCCCCcEEEee-CCCeEEEEecC
Q 017194 335 DLLIKNINLNKKVNWLCTTPTESENLVVCD-TSKVVKVYSIS 375 (375)
Q Consensus 335 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~v~iw~~~ 375 (375)
..+............++|+| ++++|++++ .++.|.+|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~d~~ 303 (331)
T 3u4y_A 263 HGLLIDPRPLFGANQMALNK-TETKLFISANISRELKVFTIS 303 (331)
T ss_dssp CCCCCCCGGGTTCCCEEECT-TSSEEEEEETTTTEEEEEETT
T ss_pred cccccCCCCcccccceEECC-CCCEEEEecCCCCcEEEEEec
Confidence 00000011112235689999 888876655 56799999974
No 132
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.97 E-value=6.5e-29 Score=229.50 Aligned_cols=318 Identities=7% Similarity=0.000 Sum_probs=220.6
Q ss_pred CceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCc---cEEEEEEeCCCCeEEEEcCC---------CeEE
Q 017194 16 ATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNG---PVTSLCFKSGNEDIIYVSSG---------KEVK 83 (375)
Q Consensus 16 ~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~---~v~~l~~~~~~~~l~~~~~d---------~~i~ 83 (375)
..+.+++|+|| ++++++ +.||+|++||+.+++....+..|.. .|.+++|+|||++|++++.+ +.++
T Consensus 17 ~~~~~~~~spd-g~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 17 IHDPEAKWISD-TEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCCBSSS-SCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred ccccccEEcCC-CcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 34678999999 787766 7899999999999998877776654 49999999999999998764 7889
Q ss_pred EEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccce--------------
Q 017194 84 SFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSIC-------------- 149 (375)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v-------------- 149 (375)
+||+.+++. ..+.....|...+..++|+|||+.|+.++. +.|++||+.+++...... .+...+
T Consensus 95 ~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~-~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 95 LSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVS-TGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp EEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEEC-CCBTTTEEEEECCHHHHHTT
T ss_pred EEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEec-CCCCCceECcccceeEEEEe
Confidence 999998754 444444455566899999999999999876 799999999887766555 433333
Q ss_pred ----eEEEEeeCCCcEEEEeecCC----------------------------------eEEEeeCCCCCcceEEecCCCC
Q 017194 150 ----SSVQFIPWKPWEVISGGLDS----------------------------------KLVMWDFSKGRPNKIVNFGLPE 191 (375)
Q Consensus 150 ----~~~~~~~~~~~~l~~~~~d~----------------------------------~i~~wd~~~~~~~~~~~~~~~~ 191 (375)
.+++|+|+|+ .|++++.++ .|++||+.+++....+..+
T Consensus 172 ~~~~~~~~~SpDg~-~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~--- 247 (723)
T 1xfd_A 172 LKTHIAHWWSPDGT-RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPP--- 247 (723)
T ss_dssp SSSSEEEEECTTSS-EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCC---
T ss_pred ccCcceEEECCCCC-EEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCC---
Confidence 7899999999 677776442 7899999887755554321
Q ss_pred CCCCCCcccCCCceeEEeecCCccccCCCCEEEEEec----CCcEEEEeCCCcceeecccccCCCCC----Cceeecccc
Q 017194 192 NNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKG----DGVVDVINIESELNISRSKSTTKPLK----GSQSTSKVN 263 (375)
Q Consensus 192 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~~----~~~~~s~~g 263 (375)
.....+...+..++|+| ||+++++... +..|++||+.+++............. ..+.|+|||
T Consensus 248 ----~~~~~~~~~~~~~~~Sp------Dg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg 317 (723)
T 1xfd_A 248 ----DDPRMREYYITMVKWAT------STKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDG 317 (723)
T ss_dssp ----CCGGGSSEEEEEEEESS------SSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTS
T ss_pred ----ccCCCccceeEEEEEeC------CCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCC
Confidence 00001245788999999 7998877653 35799999998765543322222222 478999999
Q ss_pred cceeee-eeeec----------CC-cceeE--eeeeecCCCccEEE-EEEeecCCCCcEEEEecCC---CeEEEEeCCCc
Q 017194 264 IRDAEM-EILDQ----------SG-GKRLH--LDYSVGGHTAAASC-VAFSMFGERGKYLISGGND---KLVKVWDCSRF 325 (375)
Q Consensus 264 ~~~~~~-~~~~~----------~~-~~~~~--~~~~~~~~~~~v~~-~~~s~~~~~~~~l~s~~~d---g~i~iwd~~~~ 325 (375)
+.++.. ...+. .+ ..... +...+..+...+.. ++|+ |||+.|+..+.+ +.++||++...
T Consensus 318 ~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~s---pdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 318 RKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYD---EKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp CSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEE---TTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred CeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEc---CCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 988864 22211 01 00000 02233333334444 6899 999998765544 78999998753
Q ss_pred eeeeecchhhhhhhhcc---cccceeeeeecCCCCCcEEEe
Q 017194 326 QGVQTSINNDLLIKNIN---LNKKVNWLCTTPTESENLVVC 363 (375)
Q Consensus 326 ~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~s~ 363 (375)
.. .....+.. |...+..++|+| +|++|+..
T Consensus 395 ~~-------~~~~~l~~~~~~~~~~~~~~~sp-dg~~l~~~ 427 (723)
T 1xfd_A 395 GN-------FNRQCLSCDLVENCTYFSASFSH-SMDFFLLK 427 (723)
T ss_dssp TT-------CCCBCSSTTSSSSCCCCEEEECT-TSSEEEEE
T ss_pred CC-------CCcceecccccCCCCeEEEEECC-CCCEEEEE
Confidence 10 01112222 667788999999 88877764
No 133
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.97 E-value=4e-28 Score=232.05 Aligned_cols=338 Identities=7% Similarity=-0.021 Sum_probs=237.8
Q ss_pred CCCCeeeecCCCceeEEEEecCCCCEEEEeCCC------CcEEEEecccCceeeEeeecCccE-------EEEEEeCCCC
Q 017194 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGED------GCICWFDLRSKDVQLVTDVGNGPV-------TSLCFKSGNE 71 (375)
Q Consensus 5 ~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d------~~i~iw~~~~~~~~~~~~~~~~~v-------~~l~~~~~~~ 71 (375)
+...+.+.+|...+.+++|+|| |++||+++.+ ..|.+|++.+++ ...+..|...+ ..++|+|||+
T Consensus 42 gg~~~~lt~~~~~v~~~~~SPD-G~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~ 119 (1045)
T 1k32_A 42 SGSTRKIVSNLGVINNARFFPD-GRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGN 119 (1045)
T ss_dssp TCCEEEEECSSSEEEEEEECTT-SSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCC
T ss_pred CCcEEEeeeCCCcccCeEECCC-CCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccccccCCCCCE
Confidence 4556788999999999999999 8999977543 479999998776 56778888888 9999999999
Q ss_pred eEEEEcCC------CeEEEEECCCCCcccc----------------------------------------------cccc
Q 017194 72 DIIYVSSG------KEVKSFDVHMPASWRP----------------------------------------------LESY 99 (375)
Q Consensus 72 ~l~~~~~d------~~i~iwd~~~~~~~~~----------------------------------------------~~~~ 99 (375)
.+++++.+ ..|.+|++.++..... ...+
T Consensus 120 ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l 199 (1045)
T 1k32_A 120 LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKI 199 (1045)
T ss_dssp EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEE
T ss_pred EEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEEC
Confidence 66666644 3688888765432110 0112
Q ss_pred cCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcC-ceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCC
Q 017194 100 NYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQ-HCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178 (375)
Q Consensus 100 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~ 178 (375)
..|...+.++.|+++ .++++++.++.+.+|.+.. +.....+. .|. .+..++|+|+|+ .++.+ .++.|++||+..
T Consensus 200 ~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~-~~~-~~~~~~~SpDG~-~la~~-~~~~i~~~d~~~ 274 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHT-SFT-DYYPRHLNTDGR-RILFS-KGGSIYIFNPDT 274 (1045)
T ss_dssp ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECC-CCC-SSCEEEEEESSS-CEEEE-ETTEEEEECTTT
T ss_pred cCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEec-CCC-CcceeeEcCCCC-EEEEE-eCCEEEEecCCc
Confidence 345677888889888 5667777889999998753 44445555 444 467789999998 46666 589999999943
Q ss_pred CCcceEEecCCCCCCCCCCcccCCCceeEEeec-CCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCce
Q 017194 179 GRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIP-DADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQ 257 (375)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 257 (375)
..+..+... ..........+...+.+++|+ | +++.|++++ ++.|.+|++.++.... ...........+
T Consensus 275 -~~l~~l~~~--~~~~~~~~~~~~~~v~~~~~S~p------dG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~ 343 (1045)
T 1k32_A 275 -EKIEKIEIG--DLESPEDRIISIPSKFAEDFSPL------DGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRR 343 (1045)
T ss_dssp -CCEEECCCC--CCCBCCSEEEECGGGGEEEEEEC------GGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEE
T ss_pred -eEeeeeccC--cccccccccccccccceeeecCC------CCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEee
Confidence 333333211 000000001123468899999 9 799998887 7899999998765433 222222255678
Q ss_pred eecccccceeeee----eeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecch
Q 017194 258 STSKVNIRDAEME----ILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSIN 333 (375)
Q Consensus 258 ~~s~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 333 (375)
+|+ ||+.+++.. .++....... ....+.+|...+..++|+ |||++|++++.++.|++||+.++
T Consensus 344 ~~s-dg~~l~~~s~~~~l~~~~d~~~~-~~~~l~~~~~~~~~~~~S---pDG~~la~~~~~~~v~~~d~~tg-------- 410 (1045)
T 1k32_A 344 GGD-TKVAFIHGTREGDFLGIYDYRTG-KAEKFEENLGNVFAMGVD---RNGKFAVVANDRFEIMTVDLETG-------- 410 (1045)
T ss_dssp CSS-SEEEEEEEETTEEEEEEEETTTC-CEEECCCCCCSEEEEEEC---TTSSEEEEEETTSEEEEEETTTC--------
T ss_pred eEc-CCCeEEEEECCCceEEEEECCCC-CceEecCCccceeeeEEC---CCCCEEEEECCCCeEEEEECCCC--------
Confidence 899 998887632 1101111111 112344777889999999 99999999999999999999987
Q ss_pred hhhhhhhcccccceeeeeecCCCCCcEEEeeCCC----------eEEEEecC
Q 017194 334 NDLLIKNINLNKKVNWLCTTPTESENLVVCDTSK----------VVKVYSIS 375 (375)
Q Consensus 334 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg----------~v~iw~~~ 375 (375)
+......+|...+..++|+| ||++|++++.++ .|++||+.
T Consensus 411 -~~~~~~~~~~~~v~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 411 -KPTVIERSREAMITDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp -CEEEEEECSSSCCCCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred -ceEEeccCCCCCccceEECC-CCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 33334447888999999999 999999887654 89999973
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=3.2e-27 Score=208.93 Aligned_cols=301 Identities=11% Similarity=0.087 Sum_probs=217.9
Q ss_pred cCCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEec--ccCceeeEeeecCccEEEEEEeC----CCCeEEEE
Q 017194 3 DAEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDL--RSKDVQLVTDVGNGPVTSLCFKS----GNEDIIYV 76 (375)
Q Consensus 3 ~~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~--~~~~~~~~~~~~~~~v~~l~~~~----~~~~l~~~ 76 (375)
.+++.+.++..+.. +.+++|+|+ +++|++++.|++|.+||+ .+++.+..+.. ...+..++|+| +|++++++
T Consensus 167 ~t~~~~~~i~~g~~-~~~v~~spd-g~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~ 243 (543)
T 1nir_A 167 DSKKIVKVIDTGYA-VHISRMSAS-GRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAG 243 (543)
T ss_dssp TTCCEEEEEECSTT-EEEEEECTT-SCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEE
T ss_pred CCceEEEEEecCcc-cceEEECCC-CCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEE
Confidence 35666777874333 889999999 899999999999999999 88888888874 55679999999 99999988
Q ss_pred cC-CCeEEEEECCCCCccccccccc-------CC-CcceeEEEEcCCCCe-EEEEeCCCcEEEEeCcCceeee--eEecC
Q 017194 77 SS-GKEVKSFDVHMPASWRPLESYN-------YN-KEEINQIVCNPKSSF-LACADDGGDVKIIDIRQHCLYK--SLRAG 144 (375)
Q Consensus 77 ~~-d~~i~iwd~~~~~~~~~~~~~~-------~~-~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~--~~~~~ 144 (375)
+. +++|.+||..+.+....+.... .| ...+..+.++|++.. +++...++.|.+||+.+.+.+. .+.
T Consensus 244 ~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-- 321 (543)
T 1nir_A 244 AYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-- 321 (543)
T ss_dssp EEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE--
T ss_pred EccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec--
Confidence 85 7999999998876655544311 02 237889999997665 5566688999999998766544 444
Q ss_pred cccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEE
Q 017194 145 HSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICV 224 (375)
Q Consensus 145 ~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~ 224 (375)
+...+.++.|+|+++++++++..+++|.+||+.+++++..+..+.. -|+.....+ ++|. .+..++
T Consensus 322 ~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~---------ph~g~g~~~-~~p~-----~g~~~~ 386 (543)
T 1nir_A 322 AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKT---------PHPGRGANF-VHPK-----YGPVWS 386 (543)
T ss_dssp CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSS---------BCCTTCEEE-EETT-----TEEEEE
T ss_pred cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCC---------CCCCCCccc-CCCC-----CccEEE
Confidence 5667889999999996555666789999999999998888874310 022222233 3552 366666
Q ss_pred EEe-cCCcEEEEeCCC-------cceeecccccCCCCCCceeecccccceeeee-------------eeecCCccee-Ee
Q 017194 225 VAK-GDGVVDVINIES-------ELNISRSKSTTKPLKGSQSTSKVNIRDAEME-------------ILDQSGGKRL-HL 282 (375)
Q Consensus 225 ~~~-~dg~i~i~d~~~-------~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-------------~~~~~~~~~~-~~ 282 (375)
++. .|++|.+||+.+ .+.......+ ......++++|+|+++++.. .++....... +.
T Consensus 387 s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~-g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~ 465 (543)
T 1nir_A 387 TSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQ-GGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQV 465 (543)
T ss_dssp EEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS-CSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEE
T ss_pred eccCCCceEEEEEeCCCCCchhcCeEEEEEEcC-CCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEE
Confidence 665 689999999987 4444333322 24457789999999988743 1222222211 11
Q ss_pred ee-----eecCCCccEEEEEEeecCCCCcEEEEe-----cCCCeEEEEeCCCcee
Q 017194 283 DY-----SVGGHTAAASCVAFSMFGERGKYLISG-----GNDKLVKVWDCSRFQG 327 (375)
Q Consensus 283 ~~-----~~~~~~~~v~~~~~s~~~~~~~~l~s~-----~~dg~i~iwd~~~~~~ 327 (375)
+. .+..+...+..++|+ |+|++++.+ +.|+.|.|||.++++.
T Consensus 466 ~~v~~~~~~~~~~~~~~~~~~~---~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~ 517 (543)
T 1nir_A 466 LPIAEWADLGEGAKRVVQPEYN---KRGDEVWFSVWNGKNDSSALVVVDDKTLKL 517 (543)
T ss_dssp ECHHHHHCCCSSCCEEEEEEEC---SSSSEEEEEEECCTTSCCEEEEEETTTTEE
T ss_pred eechhhcccCCCCCceEeccCC---CCCCEEEEEeecCCCCCCeEEEEECCCceE
Confidence 10 124567789999999 999998865 3479999999999854
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=4.7e-27 Score=197.51 Aligned_cols=277 Identities=13% Similarity=0.093 Sum_probs=191.1
Q ss_pred CEEEEeCCCCcEEEEecc-cCc--eeeEeeecCccEEEEEEeCCCCeEEEEcCC-CeEEEEECC--CCCcccccccccCC
Q 017194 29 GFVASSGEDGCICWFDLR-SKD--VQLVTDVGNGPVTSLCFKSGNEDIIYVSSG-KEVKSFDVH--MPASWRPLESYNYN 102 (375)
Q Consensus 29 ~~l~s~~~d~~i~iw~~~-~~~--~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-~~i~iwd~~--~~~~~~~~~~~~~~ 102 (375)
.++++++.|+.|++|++. +++ .+.. ..+...+.+++|+|++++|++++.+ +.|.+|++. +++ ...+..+..+
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~ 83 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA-LTFAAESALP 83 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC-EEEEEEEECS
T ss_pred EEEEeCCCCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc-eeeccccccC
Confidence 345555789999999995 332 2333 3467789999999999998888876 899999997 433 2333334333
Q ss_pred CcceeEEEEcCCCCeEEEEeC-CCcEEEEeC---cCceeeeeEecCcccceeEEEEeeCCCcEEEEee-cCCeEEEeeCC
Q 017194 103 KEEINQIVCNPKSSFLACADD-GGDVKIIDI---RQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGG-LDSKLVMWDFS 177 (375)
Q Consensus 103 ~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~i~~wd~~ 177 (375)
..+..++|+|++++|++++. ++.|.+||+ ...+.+..+. ....+.+++|+|+++ .+++++ .++.|.+||+.
T Consensus 84 -~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~-~l~~~~~~~~~v~~~d~~ 159 (343)
T 1ri6_A 84 -GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE--GLDGCHSANISPDNR-TLWVPALKQDRICLFTVS 159 (343)
T ss_dssp -SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC--CCTTBCCCEECTTSS-EEEEEEGGGTEEEEEEEC
T ss_pred -CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc--CCCCceEEEECCCCC-EEEEecCCCCEEEEEEec
Confidence 37899999999998877664 888999999 4445555555 334689999999998 455555 89999999998
Q ss_pred C-CCcce----EEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe-cCCcEEEEeCCCcceeecccccCC
Q 017194 178 K-GRPNK----IVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK-GDGVVDVINIESELNISRSKSTTK 251 (375)
Q Consensus 178 ~-~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~ 251 (375)
+ ++... .+... ....+..++|+| +++++++++ .++.|.+|++.......
T Consensus 160 ~~~~~~~~~~~~~~~~------------~~~~~~~~~~~p------dg~~l~~~~~~~~~i~~~~~~~~~g~~------- 214 (343)
T 1ri6_A 160 DDGHLVAQDPAEVTTV------------EGAGPRHMVFHP------NEQYAYCVNELNSSVDVWELKDPHGNI------- 214 (343)
T ss_dssp TTSCEEEEEEEEEECS------------TTCCEEEEEECT------TSSEEEEEETTTTEEEEEESSCTTSCC-------
T ss_pred CCCceeeecccccccC------------CCCCcceEEECC------CCCEEEEEeCCCCEEEEEEecCCCCcE-------
Confidence 7 54332 22221 234678899999 788766554 78999999996411000
Q ss_pred CCCCceeecccccceeeeeeeecCCcceeEeeeeecC---CCccEEEEEEeecCCCCcEEE-EecCCCeEEEEeCCC--c
Q 017194 252 PLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGG---HTAAASCVAFSMFGERGKYLI-SGGNDKLVKVWDCSR--F 325 (375)
Q Consensus 252 ~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~~~~l~-s~~~dg~i~iwd~~~--~ 325 (375)
........+.. ....+..++|+ |+|++|+ ++..++.|.+||+.. +
T Consensus 215 --------------------------~~~~~~~~~~~~~~~~~~~~~i~~s---~dg~~l~v~~~~~~~i~v~d~~~~~~ 265 (343)
T 1ri6_A 215 --------------------------ECVQTLDMMPENFSDTRWAADIHIT---PDGRHLYACDRTASLITVFSVSEDGS 265 (343)
T ss_dssp --------------------------EEEEEEECSCTTCCSCCCEEEEEEC---TTSSEEEEEETTTTEEEEEEECTTSC
T ss_pred --------------------------EEEeeccccCccccccCCccceEEC---CCCCEEEEEecCCCEEEEEEEcCCCC
Confidence 00011111111 13467789999 9998777 556799999999983 2
Q ss_pred eeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEee-CCCeEEEEec
Q 017194 326 QGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCD-TSKVVKVYSI 374 (375)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~v~iw~~ 374 (375)
.. +.+.....+.. +..++|+| ++++|++++ .|+.|.+|++
T Consensus 266 ~~-------~~~~~~~~~~~-~~~~~~s~-dg~~l~~~~~~~~~v~v~~~ 306 (343)
T 1ri6_A 266 VL-------SKEGFQPTETQ-PRGFNVDH-SGKYLIAAGQKSHHISVYEI 306 (343)
T ss_dssp CE-------EEEEEEECSSS-CCCEEECT-TSSEEEEECTTTCEEEEEEE
T ss_pred ce-------EEeeeecCCCc-cceEEECC-CCCEEEEecCCCCeEEEEEE
Confidence 11 22222233333 88999999 899888877 6899999964
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.96 E-value=1.6e-27 Score=196.10 Aligned_cols=259 Identities=9% Similarity=0.023 Sum_probs=188.9
Q ss_pred EeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCC-CCcccccccccCCCcceeEEEE
Q 017194 33 SSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHM-PASWRPLESYNYNKEEINQIVC 111 (375)
Q Consensus 33 s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~v~~~~~ 111 (375)
.++.|+.|++||+.+++.. .+..|...|.+++|+|++++|++++ ++.|++||+.+ ++....... .+...+.+++|
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~ 92 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTG--FATICNNDHGI 92 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCT--TCCCBCSCCEE
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccc--cccccccceEE
Confidence 4567899999999988765 4555889999999999999999887 88999999987 543322211 12467899999
Q ss_pred cCCCCeEEEEe--CCCcEEEE--eCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCC-CcceEEe
Q 017194 112 NPKSSFLACAD--DGGDVKII--DIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKG-RPNKIVN 186 (375)
Q Consensus 112 ~~~~~~l~~~~--~dg~i~iw--d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-~~~~~~~ 186 (375)
+|++++|++++ .++...+| ++.+++ ...+. +...+..++|+|+++.+++++..++.+++|+++.. .....+.
T Consensus 93 spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 169 (297)
T 2ojh_A 93 SPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMT--KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLT 169 (297)
T ss_dssp CTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECC--SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECC
T ss_pred CCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEee--cCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcc
Confidence 99999999998 33445555 444444 34444 33458899999999854558889999999986432 2222222
Q ss_pred cCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe-cCCcEEEEeCCCcceeecccccCCCCCCceeecccccc
Q 017194 187 FGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK-GDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIR 265 (375)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~ 265 (375)
. +...+.+++|+| +++.+++++ .++.+++|++....
T Consensus 170 -~------------~~~~~~~~~~s~------dg~~l~~~~~~~~~~~i~~~~~~~------------------------ 206 (297)
T 2ojh_A 170 -H------------GEGRNDGPDYSP------DGRWIYFNSSRTGQMQIWRVRVDG------------------------ 206 (297)
T ss_dssp -C------------SSSCEEEEEECT------TSSEEEEEECTTSSCEEEEEETTS------------------------
T ss_pred -c------------CCCccccceECC------CCCEEEEEecCCCCccEEEECCCC------------------------
Confidence 1 356789999999 788877666 58899999876210
Q ss_pred eeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCC-----------CeEEEEeCCCceeeeecchh
Q 017194 266 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGND-----------KLVKVWDCSRFQGVQTSINN 334 (375)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~~ 334 (375)
.....+..|...+..++|+ |+|++|++++.+ +.|++||+.+++.
T Consensus 207 ---------------~~~~~~~~~~~~~~~~~~s---~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~------- 261 (297)
T 2ojh_A 207 ---------------SSVERITDSAYGDWFPHPS---PSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV------- 261 (297)
T ss_dssp ---------------SCEEECCCCSEEEEEEEEC---TTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC-------
T ss_pred ---------------CCcEEEecCCcccCCeEEC---CCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc-------
Confidence 1123455667788999999 999999988765 5699999988732
Q ss_pred hhhhhhcccccceeeeeecCCCCCcEEEeeCCC
Q 017194 335 DLLIKNINLNKKVNWLCTTPTESENLVVCDTSK 367 (375)
Q Consensus 335 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg 367 (375)
..+....+|...+..++|+| ++++|++++.|.
T Consensus 262 ~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~ 293 (297)
T 2ojh_A 262 ETLFDLFGGQGTMNSPNWSP-DGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEEESTTTSCSCCBCT-TSSEEEEEEECC
T ss_pred eeeeccCCCCcccccceECC-CCCEEEEEEecc
Confidence 11223446788899999999 999988887653
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.96 E-value=4.1e-27 Score=197.38 Aligned_cols=267 Identities=8% Similarity=0.026 Sum_probs=195.9
Q ss_pred CEEEEeCCCCcEEEEecccCceeeEeeecCc--cEEEEEEeCCCCeEE-EEcCCCeEEEEECCCCCccccccccc--CCC
Q 017194 29 GFVASSGEDGCICWFDLRSKDVQLVTDVGNG--PVTSLCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYN--YNK 103 (375)
Q Consensus 29 ~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~--~v~~l~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~--~~~ 103 (375)
++|++++.++.|.+||..+++.+..+..... .+..++|+|++++++ ++..++.|.+||+.+++....+.... .+.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4789999999999999999988887764332 578999999998765 45567899999998876544333211 012
Q ss_pred cceeEEEEcCCCCeEEEEe------------CCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeE
Q 017194 104 EEINQIVCNPKSSFLACAD------------DGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKL 171 (375)
Q Consensus 104 ~~v~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i 171 (375)
..+..++|+|++++++++. .++.|.+||+.+++.+..+. . ...+.+++|+|+++ .++++ ++.|
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~-~~~~~~~~~s~dg~-~l~~~--~~~i 156 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE-A-PRQITMLAWARDGS-KLYGL--GRDL 156 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE-C-CSSCCCEEECTTSS-CEEEE--SSSE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe-C-CCCcceeEECCCCC-EEEEe--CCeE
Confidence 3678899999999998886 57999999999988888877 3 45688899999998 46665 6889
Q ss_pred EEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCC---------------------
Q 017194 172 VMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDG--------------------- 230 (375)
Q Consensus 172 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg--------------------- 230 (375)
.+||+.+++....+..+. ....+.++| +++.+++.+..+
T Consensus 157 ~~~d~~~~~~~~~~~~~~--------------~~~~~~~s~------dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (337)
T 1pby_B 157 HVMDPEAGTLVEDKPIQS--------------WEAETYAQP------DVLAVWNQHESSGVMATPFYTARKDIDPADPTA 216 (337)
T ss_dssp EEEETTTTEEEEEECSTT--------------TTTTTBCCC------BCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGG
T ss_pred EEEECCCCcEeeeeeccc--------------cCCCceeCC------CccEEeeeccCCCceeeeeeccccccccccccc
Confidence 999999988777665431 011225666 566554444322
Q ss_pred ---cEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcE
Q 017194 231 ---VVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKY 307 (375)
Q Consensus 231 ---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~ 307 (375)
.|.+||+.+++.. ...+..+...+..++|+ |+|++
T Consensus 217 ~~~~v~~~d~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~s---~dg~~ 254 (337)
T 1pby_B 217 YRTGLLTMDLETGEMA---------------------------------------MREVRIMDVFYFSTAVN---PAKTR 254 (337)
T ss_dssp EEEEEEEEETTTCCEE---------------------------------------EEEEEECSSCEEEEEEC---TTSSE
T ss_pred cccceEEEeCCCCCce---------------------------------------EeecCCCCCceeeEEEC---CCCCE
Confidence 3567777653211 12334455678899999 99999
Q ss_pred EEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 308 LISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 308 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
++++ ++.|++||+.+++.. ..+. ....+.+++|+| ++++|++++.++.|++||++
T Consensus 255 l~~~--~~~v~~~d~~~~~~~---------~~~~-~~~~~~~~~~s~-dg~~l~~~~~~~~i~v~d~~ 309 (337)
T 1pby_B 255 AFGA--YNVLESFDLEKNASI---------KRVP-LPHSYYSVNVST-DGSTVWLGGALGDLAAYDAE 309 (337)
T ss_dssp EEEE--ESEEEEEETTTTEEE---------EEEE-CSSCCCEEEECT-TSCEEEEESBSSEEEEEETT
T ss_pred EEEe--CCeEEEEECCCCcCc---------ceec-CCCceeeEEECC-CCCEEEEEcCCCcEEEEECc
Confidence 9988 799999999987432 2222 234678899999 99999999999999999974
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.96 E-value=6.9e-26 Score=191.23 Aligned_cols=278 Identities=10% Similarity=0.059 Sum_probs=205.5
Q ss_pred CCCceeEEEEecCCCCEEEEeCC-------CCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEE-cCCCeEEEE
Q 017194 14 HKATATCCIASRDRPGFVASSGE-------DGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYV-SSGKEVKSF 85 (375)
Q Consensus 14 h~~~i~~~~~~~~~~~~l~s~~~-------d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~d~~i~iw 85 (375)
....+..++|+|+ ++.+++++. ++.|.+||..+++.+..+.. ...+..++|+|++++++++ ..++.|.+|
T Consensus 39 ~~~~~~~~~~s~d-g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 39 VGKGAYEMAYSQQ-ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp EESSEEEEEEETT-TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEE
T ss_pred hccCccceEECCC-CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 3456889999999 677766653 56899999999998888875 4457889999999965554 557899999
Q ss_pred ECCCCCcccccccccCC------CcceeEEEEcCCCCeEEEEe--CCCcEEEEeCcCceeeeeEecCcccceeEEEEeeC
Q 017194 86 DVHMPASWRPLESYNYN------KEEINQIVCNPKSSFLACAD--DGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPW 157 (375)
Q Consensus 86 d~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 157 (375)
|..+++....+...... ...+.+++|+|+++++++++ .++.|.+||+.+++.+..+. .+...+.+++|+|+
T Consensus 117 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~s~d 195 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ-NTGKMSTGLALDSE 195 (353)
T ss_dssp ETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC-CCCTTCCCCEEETT
T ss_pred eCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec-CCCCccceEEECCC
Confidence 99987654444321110 01268899999999887776 47889999999999888887 56667899999999
Q ss_pred CCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEec-CCcEEEEe
Q 017194 158 KPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKG-DGVVDVIN 236 (375)
Q Consensus 158 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d 236 (375)
++ .+++++.++.|.+||+.+++....+..... .+...+..++++| +++.+++++. ++.|.+||
T Consensus 196 g~-~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~---------~~~~~~~~~~~s~------dg~~l~~~~~~~~~v~~~d 259 (353)
T 3vgz_A 196 GK-RLYTTNADGELITIDTADNKILSRKKLLDD---------GKEHFFINISLDT------ARQRAFITDSKAAEVLVVD 259 (353)
T ss_dssp TT-EEEEECTTSEEEEEETTTTEEEEEEECCCS---------SSCCCEEEEEEET------TTTEEEEEESSSSEEEEEE
T ss_pred CC-EEEEEcCCCeEEEEECCCCeEEEEEEcCCC---------CCCcccceEEECC------CCCEEEEEeCCCCEEEEEE
Confidence 98 688888899999999999988887775310 0234577899999 7887776665 58999999
Q ss_pred CCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEE-EecCCC
Q 017194 237 IESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLI-SGGNDK 315 (375)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~-s~~~dg 315 (375)
+.+++.. ..+.... ...++|+ |+|++++ +...++
T Consensus 260 ~~~~~~~----------------------------------------~~~~~~~--~~~~~~s---~dg~~l~v~~~~~~ 294 (353)
T 3vgz_A 260 TRNGNIL----------------------------------------AKVAAPE--SLAVLFN---PARNEAYVTHRQAG 294 (353)
T ss_dssp TTTCCEE----------------------------------------EEEECSS--CCCEEEE---TTTTEEEEEETTTT
T ss_pred CCCCcEE----------------------------------------EEEEcCC--CceEEEC---CCCCEEEEEECCCC
Confidence 9875322 1111111 1468899 8998555 455799
Q ss_pred eEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCC
Q 017194 316 LVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTS 366 (375)
Q Consensus 316 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 366 (375)
.|.+||..+++. +..+. ....+..++|+| ++++|+.+..+
T Consensus 295 ~v~~~d~~~~~~---------~~~~~-~~~~~~~~~~s~-dg~~l~v~~~~ 334 (353)
T 3vgz_A 295 KVSVIDAKSYKV---------VKTFD-TPTHPNSLALSA-DGKTLYVSVKQ 334 (353)
T ss_dssp EEEEEETTTTEE---------EEEEE-CCSEEEEEEECT-TSCEEEEEEEC
T ss_pred eEEEEECCCCeE---------EEEEe-cCCCCCeEEEcC-CCCEEEEEEcc
Confidence 999999998743 22222 234678999999 88877766544
No 139
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.96 E-value=7.6e-27 Score=223.24 Aligned_cols=319 Identities=10% Similarity=0.016 Sum_probs=234.7
Q ss_pred CCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeee-----------cCccEEEEEEe-CCCCe
Q 017194 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDV-----------GNGPVTSLCFK-SGNED 72 (375)
Q Consensus 5 ~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~-----------~~~~v~~l~~~-~~~~~ 72 (375)
+...+.+..|. .+..++|+|+ ++.|+++ .++.|.+|++.... +..+.. |...+.+++|+ |+|+.
T Consensus 235 g~~~~~l~~~~-~~~~~~~SpD-G~~la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~ 310 (1045)
T 1k32_A 235 GKDLRKHTSFT-DYYPRHLNTD-GRRILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDL 310 (1045)
T ss_dssp SCSCEECCCCC-SSCEEEEEES-SSCEEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGC
T ss_pred CCcceEecCCC-CcceeeEcCC-CCEEEEE-eCCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCE
Confidence 34456666665 4677899999 7888877 48899999985443 334443 34578999999 99999
Q ss_pred EEEEcCCCeEEEEECCCCCcccccccccCCCc-ceeEEEEcCCCCeEEEEeCCCcEE-EEeCcCceeeeeEecCccccee
Q 017194 73 IIYVSSGKEVKSFDVHMPASWRPLESYNYNKE-EINQIVCNPKSSFLACADDGGDVK-IIDIRQHCLYKSLRAGHSSICS 150 (375)
Q Consensus 73 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~i~-iwd~~~~~~~~~~~~~~~~~v~ 150 (375)
|++++ ++.+.+|++.++... .+..|.. .+..++|+ +++.|+.++.++.+. +||+.+++. ..+. +|...+.
T Consensus 311 la~~~-~~~i~~~~~~~~~~~----~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~-~~l~-~~~~~~~ 382 (1045)
T 1k32_A 311 IAFVS-RGQAFIQDVSGTYVL----KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKA-EKFE-ENLGNVF 382 (1045)
T ss_dssp EEEEE-TTEEEEECTTSSBEE----ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCE-EECC-CCCCSEE
T ss_pred EEEEE-cCEEEEEcCCCCceE----EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCc-eEec-CCcccee
Confidence 99888 889999998865422 2334556 89999999 999999998888888 999877654 3455 6788999
Q ss_pred EEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCC
Q 017194 151 SVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDG 230 (375)
Q Consensus 151 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg 230 (375)
.++|+|+|+ .|++++.++.|++||+.+++...... . +...+..++|+| ++++|++++.++
T Consensus 383 ~~~~SpDG~-~la~~~~~~~v~~~d~~tg~~~~~~~-~------------~~~~v~~~~~Sp------DG~~la~~~~~~ 442 (1045)
T 1k32_A 383 AMGVDRNGK-FAVVANDRFEIMTVDLETGKPTVIER-S------------REAMITDFTISD------NSRFIAYGFPLK 442 (1045)
T ss_dssp EEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEE-C------------SSSCCCCEEECT------TSCEEEEEEEEC
T ss_pred eeEECCCCC-EEEEECCCCeEEEEECCCCceEEecc-C------------CCCCccceEECC------CCCeEEEEecCc
Confidence 999999999 79999999999999999888766654 2 356788999999 899998887654
Q ss_pred ----------cEEEEeCCCcceeecccccCCCCCCceeecccccceeeeee------eecCCc-------ce--------
Q 017194 231 ----------VVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEI------LDQSGG-------KR-------- 279 (375)
Q Consensus 231 ----------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~------~~~~~~-------~~-------- 279 (375)
.|++||+.+++.. ... ........+.|+|||+.+++... ++.... ..
T Consensus 443 ~~~~~~~~~~~i~l~d~~~g~~~-~l~-~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (1045)
T 1k32_A 443 HGETDGYVMQAIHVYDMEGRKIF-AAT-TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIP 520 (1045)
T ss_dssp SSTTCSCCEEEEEEEETTTTEEE-ECS-CSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESST
T ss_pred cccccCCCCCeEEEEECCCCcEE-Eee-CCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCC
Confidence 8999999987622 222 22334556789999998876332 100000 00
Q ss_pred -------------------------eEeeeeecCCCccEEEEEEeecCCCCcEEEE-------------ecCCCeEEEEe
Q 017194 280 -------------------------LHLDYSVGGHTAAASCVAFSMFGERGKYLIS-------------GGNDKLVKVWD 321 (375)
Q Consensus 280 -------------------------~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s-------------~~~dg~i~iwd 321 (375)
...+..+..|...+..++++ |||+++++ ...+..|++||
T Consensus 521 ~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s---~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d 597 (1045)
T 1k32_A 521 GSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPL---ESSILIYSVPVHGEFAAYYQGAPEKGVLLKYD 597 (1045)
T ss_dssp TCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEEC---SSEEEEEECCCCCSHHHHHHCCCCCEEEEEEE
T ss_pred CCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEc---CCCeEEEEecccCcccccccccCCCceEEEEE
Confidence 00122344566788999999 99987875 12356789999
Q ss_pred CCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 322 CSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
+.+++.. .+. ..+..++++| ||++|++++.| .|++|+++
T Consensus 598 ~~~~~~~----------~l~---~~v~~~~~S~-DG~~l~~~~~~-~i~~~d~~ 636 (1045)
T 1k32_A 598 VKTRKVT----------EVK---NNLTDLRLSA-DRKTVMVRKDD-GKIYTFPL 636 (1045)
T ss_dssp TTTCCEE----------EEE---EEEEEEEECT-TSCEEEEEETT-SCEEEEES
T ss_pred CCCCcEE----------Eee---cCcceEEECC-CCCEEEEEcCC-cEEEEeCc
Confidence 9887421 111 6688899999 99999999877 79999973
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.96 E-value=1.3e-26 Score=213.54 Aligned_cols=311 Identities=11% Similarity=-0.004 Sum_probs=208.2
Q ss_pred ceeEEEEecCCCCEEEEeCCCCcEEEEecccCcee-eEeeecC-----------------ccEEEEEEeCCCCeEEEEcC
Q 017194 17 TATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQ-LVTDVGN-----------------GPVTSLCFKSGNEDIIYVSS 78 (375)
Q Consensus 17 ~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~-~~~~~~~-----------------~~v~~l~~~~~~~~l~~~~~ 78 (375)
.+..+.|. . +.+++++.|+ | +||+.+++.+ ..+..+. ..|.+++|+|+ +.++.+.
T Consensus 27 ~~~~~~w~-g--~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~- 99 (706)
T 2z3z_A 27 YVVGLQWM-G--DNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT- 99 (706)
T ss_dssp -CTTCEEE-T--TEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-
T ss_pred cCCCCcCc-C--CeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-
Confidence 35667888 3 4556666677 8 9999999873 4444333 46999999999 6666654
Q ss_pred CCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcC-----ceeeeeEecCcccc-----
Q 017194 79 GKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQ-----HCLYKSLRAGHSSI----- 148 (375)
Q Consensus 79 d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~----- 148 (375)
++.|++||+.+++... +..+...+.+++|+|||++|+++ .++.|++||+.+ ++...... .+...
T Consensus 100 ~~~i~~~d~~~~~~~~----l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~-~~~~~~~~g~ 173 (706)
T 2z3z_A 100 QGGLVGFDMLARKVTY----LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTI-DGTETLVYGQ 173 (706)
T ss_dssp TTEEEEEETTTTEEEE----EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCS-CCBTTEEESS
T ss_pred CCEEEEEECCCCceEE----ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEecc-CCCCCeEccc
Confidence 6999999998764322 22235678899999999999985 679999999988 76655444 33332
Q ss_pred ---------eeEEEEeeCCCcEEEEee---------------------------------cCCeEEEeeCCCCCcceEEe
Q 017194 149 ---------CSSVQFIPWKPWEVISGG---------------------------------LDSKLVMWDFSKGRPNKIVN 186 (375)
Q Consensus 149 ---------v~~~~~~~~~~~~l~~~~---------------------------------~d~~i~~wd~~~~~~~~~~~ 186 (375)
+.++.|+|+|+ .|++++ .+..|++||+.+++......
T Consensus 174 ~~~~ee~~~~~~~~~SpDg~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~ 252 (706)
T 2z3z_A 174 AVHQREFGIEKGTFWSPKGS-CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQT 252 (706)
T ss_dssp CCGGGCTTCCCSEEECTTSS-EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCC
T ss_pred chhhhhcCCCceEEECCCCC-EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeecc
Confidence 48999999999 677776 44689999998876433221
Q ss_pred cCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCC-----cEEEEeCCCcceeeccc-ccCC---CCCCce
Q 017194 187 FGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDG-----VVDVINIESELNISRSK-STTK---PLKGSQ 257 (375)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~-~~~~---~~~~~~ 257 (375)
.. .+...+..++|+| +++.|++++.++ .|++||+.++....... .... .....+
T Consensus 253 ~~-----------~~~~~~~~~~~sp------dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 315 (706)
T 2z3z_A 253 GE-----------PKEKFLTNLSWSP------DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPL 315 (706)
T ss_dssp CS-----------CTTCEEEEEEECT------TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCC
T ss_pred CC-----------CCceeEeeEEEEC------CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCc
Confidence 10 0346789999999 899999988775 89999999873322221 1111 123568
Q ss_pred eecc--cccceeeee------eeecCCcceeEeeeeecCCCccEEE-EEEeecCCCCcEEEEe-cCCC----eEEEEeCC
Q 017194 258 STSK--VNIRDAEME------ILDQSGGKRLHLDYSVGGHTAAASC-VAFSMFGERGKYLISG-GNDK----LVKVWDCS 323 (375)
Q Consensus 258 ~~s~--~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~~~~l~s~-~~dg----~i~iwd~~ 323 (375)
.|+| ||++++... .+... ........+..+...+.. ++|+ |+|+.|+.+ +.++ .|+.||+.
T Consensus 316 ~~sp~~dg~~l~~~~~~g~~~l~~~~--~~~~~~~~l~~~~~~v~~~~~~s---pdg~~l~~~~~~~~~~~~~l~~~d~~ 390 (706)
T 2z3z_A 316 TFLPGSNNQFIWQSRRDGWNHLYLYD--TTGRLIRQVTKGEWEVTNFAGFD---PKGTRLYFESTEASPLERHFYCIDIK 390 (706)
T ss_dssp EECTTCSSEEEEEECTTSSCEEEEEE--TTSCEEEECCCSSSCEEEEEEEC---TTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred eeecCCCCEEEEEEccCCccEEEEEE--CCCCEEEecCCCCeEEEeeeEEc---CCCCEEEEEecCCCCceEEEEEEEcC
Confidence 9999 999776421 11111 012234456667777876 7999 999877654 4444 67777877
Q ss_pred CceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCC----CeEEEEecC
Q 017194 324 RFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTS----KVVKVYSIS 375 (375)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d----g~v~iw~~~ 375 (375)
+++. ....|...+..++|+| ||++|+....+ +.|++|+++
T Consensus 391 ~~~~-----------~~l~~~~~~~~~~~sp-dg~~l~~~~~~~~~p~~i~l~d~~ 434 (706)
T 2z3z_A 391 GGKT-----------KDLTPESGMHRTQLSP-DGSAIIDIFQSPTVPRKVTVTNIG 434 (706)
T ss_dssp CCCC-----------EESCCSSSEEEEEECT-TSSEEEEEEECSSCSCEEEEEESS
T ss_pred CCCc-----------eeccCCCceEEEEECC-CCCEEEEEecCCCCCcEEEEEECC
Confidence 7521 1123566788999999 99988876443 569999863
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=2.4e-25 Score=186.22 Aligned_cols=258 Identities=10% Similarity=0.031 Sum_probs=183.5
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEE-EeCCCCcEEEEecccCce-eeEeeecCccEEEEEEeCCCCeEEEEcCCC-
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVA-SSGEDGCICWFDLRSKDV-QLVTDVGNGPVTSLCFKSGNEDIIYVSSGK- 80 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~-s~~~d~~i~iw~~~~~~~-~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~- 80 (375)
+++.+..+..+...+ +++|+|+ +++++ ++..++.|.+||+.+++. ...+..+..+..+++|+|++++++++..++
T Consensus 29 ~~~~~~~~~~~~~~~-~~~~s~d-g~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 106 (331)
T 3u4y_A 29 TLEILNQITLGYDFV-DTAITSD-CSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNH 106 (331)
T ss_dssp TCCEEEEEECCCCEE-EEEECSS-SCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSS
T ss_pred ccceeeeEEccCCcc-eEEEcCC-CCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCC
Confidence 455556666666677 9999999 66554 555588999999999987 777777777766699999999998555442
Q ss_pred --eEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEE-eCCCc-EEEEeCcCceee----eeEecCcccceeEE
Q 017194 81 --EVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACA-DDGGD-VKIIDIRQHCLY----KSLRAGHSSICSSV 152 (375)
Q Consensus 81 --~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~-i~iwd~~~~~~~----~~~~~~~~~~v~~~ 152 (375)
.|.+||+.+++....+.. .....+++|+|++++++++ ..++. |.+|++.....+ .... .....+..+
T Consensus 107 ~~~i~v~d~~~~~~~~~~~~----~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~ 181 (331)
T 3u4y_A 107 PFNMQSYSFLKNKFISTIPI----PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNI 181 (331)
T ss_dssp SCEEEEEETTTTEEEEEEEC----CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEE
T ss_pred cccEEEEECCCCCeEEEEEC----CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccc-cCCCCccce
Confidence 899999987655443322 3456899999999866555 45588 999998753322 1122 244567999
Q ss_pred EEeeCCCcEEEEeecCCeEEEeeCCCCCc---ceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe-c
Q 017194 153 QFIPWKPWEVISGGLDSKLVMWDFSKGRP---NKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK-G 228 (375)
Q Consensus 153 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~-~ 228 (375)
+|+|+++++++++..++.|.+||+.+++. +..+.. ...+..++|+| +++++++++ .
T Consensus 182 ~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~--------------~~~~~~~~~sp------dg~~l~v~~~~ 241 (331)
T 3u4y_A 182 TFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT--------------NNLPGTIVVSR------DGSTVYVLTES 241 (331)
T ss_dssp EECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC--------------SSCCCCEEECT------TSSEEEEECSS
T ss_pred EECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC--------------CCCCceEEECC------CCCEEEEEEcC
Confidence 99999985566666789999999999888 666653 35678899999 799776665 5
Q ss_pred CCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeec---CCCccEEEEEEeecCCCC
Q 017194 229 DGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVG---GHTAAASCVAFSMFGERG 305 (375)
Q Consensus 229 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~~ 305 (375)
++.|.+||+.+++...... ....+. ........++|+ |+|
T Consensus 242 ~~~i~~~d~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~s---pdg 284 (331)
T 3u4y_A 242 TVDVFNFNQLSGTLSFVKS----------------------------------FGHGLLIDPRPLFGANQMALN---KTE 284 (331)
T ss_dssp EEEEEEEETTTTEEEEEEE----------------------------------EECCCCCCCGGGTTCCCEEEC---TTS
T ss_pred CCEEEEEECCCCceeeecc----------------------------------cccccccCCCCcccccceEEC---CCC
Confidence 7789999998754311100 000000 111122568999 999
Q ss_pred cEEEE-ecCCCeEEEEeCCCc
Q 017194 306 KYLIS-GGNDKLVKVWDCSRF 325 (375)
Q Consensus 306 ~~l~s-~~~dg~i~iwd~~~~ 325 (375)
++|++ +..++.|.+||+...
T Consensus 285 ~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 285 TKLFISANISRELKVFTISGK 305 (331)
T ss_dssp SEEEEEETTTTEEEEEETTSC
T ss_pred CEEEEecCCCCcEEEEEecCC
Confidence 98765 455779999999885
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=3.8e-25 Score=185.91 Aligned_cols=255 Identities=11% Similarity=0.155 Sum_probs=177.6
Q ss_pred cCCCceeEEEEecCCCCEEEEeCCC-CcEEEEecc--cCce--eeEeeecCccEEEEEEeCCCCeEEEEcC-CCeEEEEE
Q 017194 13 GHKATATCCIASRDRPGFVASSGED-GCICWFDLR--SKDV--QLVTDVGNGPVTSLCFKSGNEDIIYVSS-GKEVKSFD 86 (375)
Q Consensus 13 ~h~~~i~~~~~~~~~~~~l~s~~~d-~~i~iw~~~--~~~~--~~~~~~~~~~v~~l~~~~~~~~l~~~~~-d~~i~iwd 86 (375)
.|...+.+++|+|+ +++|++++.+ +.|.+|++. +++. +..+..+. .+..++|+|++++|++++. ++.|.+||
T Consensus 35 ~~~~~~~~~~~spd-g~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d 112 (343)
T 1ri6_A 35 DVPGQVQPMVVSPD-KRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTR 112 (343)
T ss_dssp ECSSCCCCEEECTT-SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ecCCCCceEEECCC-CCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEE
Confidence 47788999999999 7877777765 999999997 5553 34444434 7899999999998876665 78999999
Q ss_pred CCCCCcccccccccCCCcceeEEEEcCCCCeEEEEe-CCCcEEEEeCcC-ceeee----eEecCcccceeEEEEeeCCCc
Q 017194 87 VHMPASWRPLESYNYNKEEINQIVCNPKSSFLACAD-DGGDVKIIDIRQ-HCLYK----SLRAGHSSICSSVQFIPWKPW 160 (375)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~-~~~~~----~~~~~~~~~v~~~~~~~~~~~ 160 (375)
+..+........... ...+.+++|+|+++++++++ .++.|.+||+.+ ++... .+.......+..++|+|++++
T Consensus 113 ~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~ 191 (343)
T 1ri6_A 113 LEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY 191 (343)
T ss_dssp EETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSE
T ss_pred CCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCE
Confidence 953333333333333 34688999999999888887 889999999987 54432 233123457889999999985
Q ss_pred EEEEeecCCeEEEeeCCC--CCcc--eEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEE-ecCCcEEEE
Q 017194 161 EVISGGLDSKLVMWDFSK--GRPN--KIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVA-KGDGVVDVI 235 (375)
Q Consensus 161 ~l~~~~~d~~i~~wd~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~-~~dg~i~i~ 235 (375)
+++++..++.|.+||++. ++.. ..+... +.. ......+..++|+| ++++|+++ ..++.|.+|
T Consensus 192 l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~-~~~------~~~~~~~~~i~~s~------dg~~l~v~~~~~~~i~v~ 258 (343)
T 1ri6_A 192 AYCVNELNSSVDVWELKDPHGNIECVQTLDMM-PEN------FSDTRWAADIHITP------DGRHLYACDRTASLITVF 258 (343)
T ss_dssp EEEEETTTTEEEEEESSCTTSCCEEEEEEECS-CTT------CCSCCCEEEEEECT------TSSEEEEEETTTTEEEEE
T ss_pred EEEEeCCCCEEEEEEecCCCCcEEEEeecccc-Ccc------ccccCCccceEECC------CCCEEEEEecCCCEEEEE
Confidence 455666899999999954 4332 222211 000 00123567899999 78877754 478999999
Q ss_pred eCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEec-CC
Q 017194 236 NIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGG-ND 314 (375)
Q Consensus 236 d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~-~d 314 (375)
|+.... ...+.+..+..+.. +..++|+ |+|++|++++ .+
T Consensus 259 d~~~~~------------------------------------~~~~~~~~~~~~~~-~~~~~~s---~dg~~l~~~~~~~ 298 (343)
T 1ri6_A 259 SVSEDG------------------------------------SVLSKEGFQPTETQ-PRGFNVD---HSGKYLIAAGQKS 298 (343)
T ss_dssp EECTTS------------------------------------CCEEEEEEEECSSS-CCCEEEC---TTSSEEEEECTTT
T ss_pred EEcCCC------------------------------------CceEEeeeecCCCc-cceEEEC---CCCCEEEEecCCC
Confidence 998310 01122333433333 7889999 9999888777 68
Q ss_pred CeEEEEeCC
Q 017194 315 KLVKVWDCS 323 (375)
Q Consensus 315 g~i~iwd~~ 323 (375)
+.|.+|+++
T Consensus 299 ~~v~v~~~d 307 (343)
T 1ri6_A 299 HHISVYEIV 307 (343)
T ss_dssp CEEEEEEEE
T ss_pred CeEEEEEEc
Confidence 999999554
No 143
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.95 E-value=1.1e-24 Score=183.33 Aligned_cols=272 Identities=10% Similarity=0.099 Sum_probs=184.3
Q ss_pred CCCcEEEEecc--cCceee-EeeecCccEEEEEEeCCCCeEEEEcC---CCeEEEEECCCCCcccccccccCCCcceeEE
Q 017194 36 EDGCICWFDLR--SKDVQL-VTDVGNGPVTSLCFKSGNEDIIYVSS---GKEVKSFDVHMPASWRPLESYNYNKEEINQI 109 (375)
Q Consensus 36 ~d~~i~iw~~~--~~~~~~-~~~~~~~~v~~l~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~ 109 (375)
.++.|.+|+++ +++... ....+...+..++|+|+|+ |++++. ++.|.+|++.+++ ...+.....+...+..+
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~-~~~~~~~~~~~~~p~~~ 91 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQT-AHKLNTVVAPGTPPAYV 91 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTE-EEEEEEEEEESCCCSEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCc-EEEeeeeecCCCCCEEE
Confidence 35567777765 444322 2334566778899999999 665554 5899999997543 33444444456788999
Q ss_pred EEcCCCCeEEEEe-CCCcEEEEeCcC-c--eeeeeEecC--------cccceeEEEEeeCCCcEEEEeecCCeEEEeeCC
Q 017194 110 VCNPKSSFLACAD-DGGDVKIIDIRQ-H--CLYKSLRAG--------HSSICSSVQFIPWKPWEVISGGLDSKLVMWDFS 177 (375)
Q Consensus 110 ~~~~~~~~l~~~~-~dg~i~iwd~~~-~--~~~~~~~~~--------~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 177 (375)
+|+|++++|++++ .++.|.+|++.. + +.+..+... +...+.+++|+|+++ ++++...++.|.+||+.
T Consensus 92 a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 92 AVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEEC
Confidence 9999999988887 778999999962 2 333333300 112478899999999 78888889999999998
Q ss_pred -CCCcceE--EecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEE-EecCCcEEEEeCCCcceeecccccCCCC
Q 017194 178 -KGRPNKI--VNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVV-AKGDGVVDVINIESELNISRSKSTTKPL 253 (375)
Q Consensus 178 -~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 253 (375)
+++.... +... ....+..++|+| +++++++ ...++.|.+|++.....
T Consensus 171 ~~g~~~~~~~~~~~------------~g~~p~~~~~sp------dg~~l~v~~~~~~~v~v~~~~~~~g----------- 221 (347)
T 3hfq_A 171 DAGQLSEQSVLTME------------AGFGPRHLVFSP------DGQYAFLAGELSSQIASLKYDTQTG----------- 221 (347)
T ss_dssp TTSCEEEEEEEECC------------TTCCEEEEEECT------TSSEEEEEETTTTEEEEEEEETTTT-----------
T ss_pred CCCcEEEeeeEEcC------------CCCCCceEEECC------CCCEEEEEeCCCCEEEEEEecCCCC-----------
Confidence 4443222 1211 123567899999 7986665 45788999999874100
Q ss_pred CCceeecccccceeeeeeeecCCcceeEeeeeecCC------CccEEEEEEeecCCCCcEE-EEecCCCeEEEEeCCCce
Q 017194 254 KGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGH------TAAASCVAFSMFGERGKYL-ISGGNDKLVKVWDCSRFQ 326 (375)
Q Consensus 254 ~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~s~~~~~~~~l-~s~~~dg~i~iwd~~~~~ 326 (375)
.......+... ...+..++|+ |||++| ++...++.|.+|++....
T Consensus 222 -------------------------~~~~~~~~~~~~~~~~~~~~~~~i~~s---pdG~~l~v~~~~~~~v~v~~~~~~g 273 (347)
T 3hfq_A 222 -------------------------AFTQLGIVKTIPADYTAHNGAAAIRLS---HDGHFLYVSNRGYNTLAVFAVTADG 273 (347)
T ss_dssp -------------------------EEEEEEEEESSCTTCCSCCEEEEEEEC---TTSCEEEEEEETTTEEEEEEECGGG
T ss_pred -------------------------ceEEeeeeeecCCCCCCCCcceeEEEC---CCCCEEEEEeCCCCEEEEEEECCCC
Confidence 01111111111 2458899999 999977 455668999999997321
Q ss_pred eeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeC-CCeEEEEec
Q 017194 327 GVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDT-SKVVKVYSI 374 (375)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~v~iw~~ 374 (375)
.. ..+.....+...+..++|+| +|++|++++. ++.|.+|++
T Consensus 274 ~~------~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 274 HL------TLIQQISTEGDFPRDFDLDP-TEAFVVVVNQNTDNATLYAR 315 (347)
T ss_dssp CE------EEEEEEECSSSCCCEEEECT-TSSEEEEEETTTTEEEEEEE
T ss_pred cE------EEeEEEecCCCCcCeEEECC-CCCEEEEEEcCCCcEEEEEE
Confidence 11 22333444556788999999 9998888775 489999965
No 144
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.95 E-value=1.1e-25 Score=202.64 Aligned_cols=269 Identities=9% Similarity=0.012 Sum_probs=190.8
Q ss_pred CCCceeEEEEecCCCCEEEEeCC-CCcEEEEecccCceeeEeeecC-ccEEEEEEeCCCCeEEEEcC---CCeEEEEECC
Q 017194 14 HKATATCCIASRDRPGFVASSGE-DGCICWFDLRSKDVQLVTDVGN-GPVTSLCFKSGNEDIIYVSS---GKEVKSFDVH 88 (375)
Q Consensus 14 h~~~i~~~~~~~~~~~~l~s~~~-d~~i~iw~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~~~~~---d~~i~iwd~~ 88 (375)
+..+|++++|+|| |+.||+++. ||+++||++.+++. ..+..|. ..+..++|+|+ +.++++.. +....+|.+.
T Consensus 20 ~~~~~~~~~~~~D-G~~la~~s~~~g~~~lw~~~~g~~-~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 20 IAVEKYSLQGVVD-GDKLLVVGFSEGSVNAYLYDGGET-VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HHSCEEEEEEEET-TTEEEEEEEETTEEEEEEEETTEE-EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred hccchheeecCCC-CCeEEEEEccCCceeEEEEcCCCc-EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence 3568999999999 899998877 99999999976654 4444444 68999999999 66776664 4455665543
Q ss_pred C--CCcccccccccCCCcceeEEEEcCCCCe-EEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEe
Q 017194 89 M--PASWRPLESYNYNKEEINQIVCNPKSSF-LACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISG 165 (375)
Q Consensus 89 ~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 165 (375)
. ......+... ..+...+|+|+++. +++...++.+.+||+.+++...... +.. .+++|+|||+ .++++
T Consensus 97 ~~~~g~~~~l~~~----~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~--~~~--~~~~~spDG~-~la~~ 167 (582)
T 3o4h_A 97 TSRPGEEQRLEAV----KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR--LPG--FGFVSDIRGD-LIAGL 167 (582)
T ss_dssp TTSTTCCEECTTS----CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE--ESS--CEEEEEEETT-EEEEE
T ss_pred ccCCCccccccCC----CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec--CCC--ceEEECCCCC-EEEEE
Confidence 3 2122222222 23445678888754 3333444556699999887655554 333 8899999999 68877
Q ss_pred ecC----CeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCC--cEEEEeCCC
Q 017194 166 GLD----SKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDG--VVDVINIES 239 (375)
Q Consensus 166 ~~d----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~ 239 (375)
+.+ +.|++||+.+++.. .+. . +...+..++|+| ||+.|+++..++ .|++||+.+
T Consensus 168 ~~~~~~~~~i~~~d~~~g~~~-~l~-~------------~~~~~~~~~~Sp------DG~~l~~~~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 168 GFFGGGRVSLFTSNLSSGGLR-VFD-S------------GEGSFSSASISP------GMKVTAGLETAREARLVTVDPRD 227 (582)
T ss_dssp EEEETTEEEEEEEETTTCCCE-EEC-C------------SSCEEEEEEECT------TSCEEEEEECSSCEEEEEECTTT
T ss_pred EEcCCCCeEEEEEcCCCCCce-Eee-c------------CCCccccceECC------CCCEEEEccCCCeeEEEEEcCCC
Confidence 766 78999999988764 333 2 356789999999 899999888888 899999987
Q ss_pred cceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEE--------EeecCCCCcEEEEe
Q 017194 240 ELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVA--------FSMFGERGKYLISG 311 (375)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~s~~~~~~~~l~s~ 311 (375)
++.. .+.+|...+..++ |+ |||.+++++
T Consensus 228 ~~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~s---pdg~~~~~~ 263 (582)
T 3o4h_A 228 GSVE-----------------------------------------DLELPSKDFSSYRPTAITWLGYL---PDGRLAVVA 263 (582)
T ss_dssp CCEE-----------------------------------------ECCCSCSHHHHHCCSEEEEEEEC---TTSCEEEEE
T ss_pred CcEE-----------------------------------------EccCCCcChhhhhhccccceeEc---CCCcEEEEE
Confidence 5322 2334444444444 99 999999999
Q ss_pred cCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCC---eEEEEec
Q 017194 312 GNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSK---VVKVYSI 374 (375)
Q Consensus 312 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg---~v~iw~~ 374 (375)
+.|+.+++|++ ++ ... ...+.+.+++|+ +++++++++.+. .+++|+.
T Consensus 264 ~~~g~~~l~~~--g~---------~~~---~~~~~v~~~~~s--dg~~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 264 RREGRSAVFID--GE---------RVE---APQGNHGRVVLW--RGKLVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp EETTEEEEEET--TE---------EEC---CCSSEEEEEEEE--TTEEEEEEEETTEEEEEEEETT
T ss_pred EcCCcEEEEEE--CC---------eec---cCCCceEEEEec--CCEEEEEEcCCCCCCeEEEEcC
Confidence 99999999999 53 221 233678888998 788888888774 4666654
No 145
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.94 E-value=1.3e-24 Score=187.29 Aligned_cols=209 Identities=15% Similarity=0.163 Sum_probs=158.0
Q ss_pred CCceeEEEEecCCCCEEEEeCCCCcEEEEecccCce----------ee-----EeeecCccEEEEEEeCCCCeEE----E
Q 017194 15 KATATCCIASRDRPGFVASSGEDGCICWFDLRSKDV----------QL-----VTDVGNGPVTSLCFKSGNEDII----Y 75 (375)
Q Consensus 15 ~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~----------~~-----~~~~~~~~v~~l~~~~~~~~l~----~ 75 (375)
...++.++++++ +.++++++.++ +++|+...... .. ....+...|.+++|+|++++|+ +
T Consensus 36 ~~~~n~lavs~~-~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 36 KERSSLLAVSNK-YGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CSCCBCEEEETT-TTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCccEEEEecC-CCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 446889999998 78899998887 89987542110 00 0112466799999999999999 7
Q ss_pred EcCCCeEEEEECCCC--------CcccccccccCCCcceeEEEEcCC-CCeEEEEeCCCcEEEEeCcCceeeeeEecCcc
Q 017194 76 VSSGKEVKSFDVHMP--------ASWRPLESYNYNKEEINQIVCNPK-SSFLACADDGGDVKIIDIRQHCLYKSLRAGHS 146 (375)
Q Consensus 76 ~~~d~~i~iwd~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 146 (375)
++.|+.|++||+.+. +....+..+.+|...|.+++|+|+ +.+|++++.||+|++||++++..+.... +|.
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~-~~~ 192 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATL-PST 192 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEE-CGG
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeecc-CCC
Confidence 888999999998753 112234556678999999999997 7899999999999999999887776667 789
Q ss_pred cceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEE
Q 017194 147 SICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVA 226 (375)
Q Consensus 147 ~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~ 226 (375)
..|.+++|+|+|+ +|++|+.||.|++||++ ++....+.... .. ...+...+.+++|++ ++.++++.
T Consensus 193 ~~v~~v~wspdg~-~lasgs~dg~v~iwd~~-~~~~~~~~~~~-~~-----~~~~~~~v~~v~w~~------~~~~l~~~ 258 (434)
T 2oit_A 193 VAVTSVCWSPKGK-QLAVGKQNGTVVQYLPT-LQEKKVIPCPP-FY-----ESDHPVRVLDVLWIG------TYVFAIVY 258 (434)
T ss_dssp GCEEEEEECTTSS-CEEEEETTSCEEEECTT-CCEEEEECCCT-TC-----CTTSCEEEEEEEEEE------TTEEEEEE
T ss_pred CceeEEEEcCCCC-EEEEEcCCCcEEEEccC-CcccccccCCc-cc-----CCCCceeEEEEEEec------CceEEEEE
Confidence 9999999999998 79999999999999998 55555544220 00 001234789999998 56666543
Q ss_pred -ecCC------cEEEEeCCCc
Q 017194 227 -KGDG------VVDVINIESE 240 (375)
Q Consensus 227 -~~dg------~i~i~d~~~~ 240 (375)
..+| .+++|+++..
T Consensus 259 ~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 259 AAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EETTCCSSSCCEEEEEECCCT
T ss_pred ccCCCccCCCCceEEEEeccC
Confidence 3443 3899999864
No 146
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=1.6e-25 Score=184.01 Aligned_cols=241 Identities=9% Similarity=-0.002 Sum_probs=176.6
Q ss_pred CCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEeccc-CceeeEeeec-CccEEEEEEeCCCCeEEEEcC--CCeE
Q 017194 7 KPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRS-KDVQLVTDVG-NGPVTSLCFKSGNEDIIYVSS--GKEV 82 (375)
Q Consensus 7 ~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~-~~~~~~~~~~-~~~v~~l~~~~~~~~l~~~~~--d~~i 82 (375)
....+..|...|.+++|+|+ +++|++++ ++.|.+||+.+ ++.......+ ...+.+++|+|++++|++++. ++..
T Consensus 33 ~~~~~~~~~~~v~~~~~spd-g~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 110 (297)
T 2ojh_A 33 KMRVVWQTPELFEAPNWSPD-GKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKS 110 (297)
T ss_dssp EEEEEEEESSCCEEEEECTT-SSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSC
T ss_pred ceeeeccCCcceEeeEECCC-CCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcc
Confidence 34567779999999999999 88998876 78999999998 8776666555 478899999999999999883 3444
Q ss_pred EE--EECCCCCcccccccccCCCcceeEEEEcCCCCeEE-EEeCCCcEEEEeCcC-ceeeeeEecCcccceeEEEEeeCC
Q 017194 83 KS--FDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLA-CADDGGDVKIIDIRQ-HCLYKSLRAGHSSICSSVQFIPWK 158 (375)
Q Consensus 83 ~i--wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~ 158 (375)
.+ |+..++. .. .+.. ...+..++|+|++++|+ ++..++.+++|+++. ......+. .+...+.+++|+|++
T Consensus 111 ~l~~~~~~~~~-~~---~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg 184 (297)
T 2ojh_A 111 AIYLLPSTGGT-PR---LMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLT-HGEGRNDGPDYSPDG 184 (297)
T ss_dssp EEEEEETTCCC-CE---ECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECC-CSSSCEEEEEECTTS
T ss_pred eEEEEECCCCc-eE---Eeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcc-cCCCccccceECCCC
Confidence 44 4555432 12 2222 23488899999999877 677889999998642 23334555 677889999999999
Q ss_pred CcEEEEeecCCeEEEeeCC-CCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecC--------
Q 017194 159 PWEVISGGLDSKLVMWDFS-KGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGD-------- 229 (375)
Q Consensus 159 ~~~l~~~~~d~~i~~wd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~d-------- 229 (375)
+.+++++..++.+++|+++ .+.....+.. +...+..++|+| ++++|++++.+
T Consensus 185 ~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~-------------~~~~~~~~~~s~------dg~~l~~~~~~~~~~~~~~ 245 (297)
T 2ojh_A 185 RWIYFNSSRTGQMQIWRVRVDGSSVERITD-------------SAYGDWFPHPSP------SGDKVVFVSYDADVFDHPR 245 (297)
T ss_dssp SEEEEEECTTSSCEEEEEETTSSCEEECCC-------------CSEEEEEEEECT------TSSEEEEEEEETTCCSCCS
T ss_pred CEEEEEecCCCCccEEEECCCCCCcEEEec-------------CCcccCCeEECC------CCCEEEEEEcCCCCCcccc
Confidence 8433444468999999986 4444444432 346788999999 79999888765
Q ss_pred ---CcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCc
Q 017194 230 ---GVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGK 306 (375)
Q Consensus 230 ---g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~ 306 (375)
+.|.+||+.+++. ..+..+.+|...+..++|+ |+++
T Consensus 246 ~~~~~l~~~d~~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~s---pdg~ 284 (297)
T 2ojh_A 246 DLDVRVQLMDMDGGNV--------------------------------------ETLFDLFGGQGTMNSPNWS---PDGD 284 (297)
T ss_dssp SEEEEEEEEETTSCSC--------------------------------------EEEEEEEESTTTSCSCCBC---TTSS
T ss_pred cCceEEEEEecCCCCc--------------------------------------eeeeccCCCCcccccceEC---CCCC
Confidence 5699999986421 2233444667778888999 8999
Q ss_pred EEEEecCCC
Q 017194 307 YLISGGNDK 315 (375)
Q Consensus 307 ~l~s~~~dg 315 (375)
+|++++.|.
T Consensus 285 ~l~~~~~~~ 293 (297)
T 2ojh_A 285 EFAYVRYFP 293 (297)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecc
Confidence 888776653
No 147
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=1.7e-25 Score=207.26 Aligned_cols=292 Identities=10% Similarity=0.034 Sum_probs=195.7
Q ss_pred CccEEEEEEeCCCCeEEEEcC-CC-----eEEEEECCCCCcccccccccCCC----------------------cceeEE
Q 017194 58 NGPVTSLCFKSGNEDIIYVSS-GK-----EVKSFDVHMPASWRPLESYNYNK----------------------EEINQI 109 (375)
Q Consensus 58 ~~~v~~l~~~~~~~~l~~~~~-d~-----~i~iwd~~~~~~~~~~~~~~~~~----------------------~~v~~~ 109 (375)
...+.+++|+|||++|++++. |+ .|++||+.+++....+.. ..+. ..+.++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDS-KVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECG-GGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccch-hhcccccccccchhhhhhhhhhhccccCccee
Confidence 457899999999999999998 87 899999998764333321 1111 348899
Q ss_pred EEcCCCCeEEEEeCCCcEEEEeCcCce--eeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEec
Q 017194 110 VCNPKSSFLACADDGGDVKIIDIRQHC--LYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNF 187 (375)
Q Consensus 110 ~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 187 (375)
+|+|||++|++++. +.|++||+.++. ....+. .|...+..++|+|+|+ .|+.++ ++.|++||+.+++.......
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~-~~~~~~~~~~~SPDG~-~la~~~-~~~i~~~d~~~g~~~~~~~~ 190 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLT-HGEGFATDAKLSPKGG-FVSFIR-GRNLWVIDLASGRQMQLTAD 190 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCC-CSSSCEEEEEECTTSS-EEEEEE-TTEEEEEETTTTEEEECCCC
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcc-cCCcccccccCCCCCC-EEEEEe-CCcEEEEecCCCCEEEeccC
Confidence 99999999999886 999999998873 344566 6778899999999998 577776 56999999988765433221
Q ss_pred CCCCCCCCC-Cc--ccCCCceeEEeecCCccccCCCCEEEEEecCC---------------------------------c
Q 017194 188 GLPENNGNA-GQ--CYNPAFVHAIAIPDADMLDKTNKICVVAKGDG---------------------------------V 231 (375)
Q Consensus 188 ~~~~~~~~~-~~--~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg---------------------------------~ 231 (375)
+........ .. ......+..++|+| ||+.|++++.|+ .
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~Sp------Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAP------DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECT------TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred CccceeccccceeeeeccccccceEECC------CCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 100000000 00 00001247799999 899999988765 7
Q ss_pred EEEEeCCC-cceeecccc-cCCCCCCceeecccccceeeeeeeecC--------CcceeEeeeeecCCCc----cEEEEE
Q 017194 232 VDVINIES-ELNISRSKS-TTKPLKGSQSTSKVNIRDAEMEILDQS--------GGKRLHLDYSVGGHTA----AASCVA 297 (375)
Q Consensus 232 i~i~d~~~-~~~~~~~~~-~~~~~~~~~~~s~~g~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~----~v~~~~ 297 (375)
|.+||+.+ ++....... ........++| |||+.+++....... +....+....+..+.. .+..++
T Consensus 265 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 343 (741)
T 2ecf_A 265 LGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLR 343 (741)
T ss_dssp EEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCE
T ss_pred EEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceE
Confidence 89999987 654433222 23345667899 999999864321111 1111111112222221 345789
Q ss_pred EeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeee-eecCCCCCcEEE-eeCCC--eEEEEe
Q 017194 298 FSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWL-CTTPTESENLVV-CDTSK--VVKVYS 373 (375)
Q Consensus 298 ~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~l~s-~~~dg--~v~iw~ 373 (375)
|+ |||+++++++.||.++||.+.... . ...+..|...+..+ .|+| +++.|+. ++.|+ .+++|+
T Consensus 344 ~s---pdg~~~~~~~~~g~~~l~~~~~~~--------~-~~~l~~~~~~v~~~~~~s~-dg~~l~~~~~~~~~~~~~l~~ 410 (741)
T 2ecf_A 344 FL---DDGSILWSSERTGFQHLYRIDSKG--------K-AAALTHGNWSVDELLAVDE-KAGLAYFRAGIESARESQIYA 410 (741)
T ss_dssp EC---TTSCEEEEECTTSSCEEEEECSSS--------C-EEESCCSSSCEEEEEEEET-TTTEEEEEECSSCTTCBEEEE
T ss_pred EC---CCCeEEEEecCCCccEEEEEcCCC--------C-eeeeeecceEEEeEeEEeC-CCCEEEEEEeCCCCceEEEEE
Confidence 99 999999999999988888766321 3 34455677778777 5998 8887754 45555 899998
Q ss_pred c
Q 017194 374 I 374 (375)
Q Consensus 374 ~ 374 (375)
+
T Consensus 411 ~ 411 (741)
T 2ecf_A 411 V 411 (741)
T ss_dssp E
T ss_pred E
Confidence 5
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=1.2e-24 Score=200.34 Aligned_cols=284 Identities=12% Similarity=0.028 Sum_probs=193.8
Q ss_pred CceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCC-----C
Q 017194 16 ATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHM-----P 90 (375)
Q Consensus 16 ~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~-----~ 90 (375)
..|.+++|+|+ +.++++. ++.|++||+.+++... +..+...+.+++|+|+|++|+++ .++.|++||+.+ +
T Consensus 82 ~~v~~~~~spd-~~~~~~~--~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g 156 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT--QGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMS 156 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE--TTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCC
T ss_pred cCceeEEECCC-CeEEEEE--CCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCC
Confidence 56999999999 6666654 4899999998876544 44467788999999999999985 589999999987 5
Q ss_pred CcccccccccC-----------CCcceeEEEEcCCCCeEEEEe---------------------------------CCCc
Q 017194 91 ASWRPLESYNY-----------NKEEINQIVCNPKSSFLACAD---------------------------------DGGD 126 (375)
Q Consensus 91 ~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~~---------------------------------~dg~ 126 (375)
+.......... +...+.++.|+|||++|++++ .+..
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 157 RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 43322221100 011258999999999999987 4467
Q ss_pred EEEEeCcCceeeeeEec-CcccceeEEEEeeCCCcEEEEeecCC-----eEEEeeCCCCCcceEEecCCCCCCCCCCccc
Q 017194 127 VKIIDIRQHCLYKSLRA-GHSSICSSVQFIPWKPWEVISGGLDS-----KLVMWDFSKGRPNKIVNFGLPENNGNAGQCY 200 (375)
Q Consensus 127 i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (375)
|++||+.+++....... .|...+..++|+|+|+ .|++++.++ .|++||+.+++....+....
T Consensus 237 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~----------- 304 (706)
T 2z3z_A 237 VGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDEN-ILYVAEVNRAQNECKVNAYDAETGRFVRTLFVET----------- 304 (706)
T ss_dssp EEEEETTTTEEEECCCCSCTTCEEEEEEECTTSS-EEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEE-----------
T ss_pred EEEEECCCCceEeeccCCCCceeEeeEEEECCCC-EEEEEEeCCCCCeeEEEEEECCCCceeeEEEEcc-----------
Confidence 99999998876544321 4667899999999998 677777665 89999999884443332110
Q ss_pred CCC---ceeEEeecCCccccCCCCEEEEEecCCcEEEEeCC-CcceeecccccCCCCCCc-eeecccccceeeeeeeecC
Q 017194 201 NPA---FVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIE-SELNISRSKSTTKPLKGS-QSTSKVNIRDAEMEILDQS 275 (375)
Q Consensus 201 ~~~---~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~-~~~s~~g~~~~~~~~~~~~ 275 (375)
... .+..++|+| ..+++++++++.+|.+++|++. ++........ ....+.. +.++|||+.+++.+..+..
T Consensus 305 ~~~~~~~~~~~~~sp----~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~-~~~~v~~~~~~spdg~~l~~~~~~~~~ 379 (706)
T 2z3z_A 305 DKHYVEPLHPLTFLP----GSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTK-GEWEVTNFAGFDPKGTRLYFESTEASP 379 (706)
T ss_dssp CSSCCCCCSCCEECT----TCSSEEEEEECTTSSCEEEEEETTSCEEEECCC-SSSCEEEEEEECTTSSEEEEEESSSCT
T ss_pred CCCeECccCCceeec----CCCCEEEEEEccCCccEEEEEECCCCEEEecCC-CCeEEEeeeEEcCCCCEEEEEecCCCC
Confidence 111 235677876 0148899999999999999876 3333333322 2222333 6899999988764322210
Q ss_pred --------CcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCC----CeEEEEeCCCce
Q 017194 276 --------GGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGND----KLVKVWDCSRFQ 326 (375)
Q Consensus 276 --------~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~d----g~i~iwd~~~~~ 326 (375)
+.... ....+ .|...+..++|+ |||++|+....+ +.|++||+.+++
T Consensus 380 ~~~~l~~~d~~~~-~~~~l-~~~~~~~~~~~s---pdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 380 LERHFYCIDIKGG-KTKDL-TPESGMHRTQLS---PDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp TCBEEEEEETTCC-CCEES-CCSSSEEEEEEC---TTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred ceEEEEEEEcCCC-Cceec-cCCCceEEEEEC---CCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 00000 11222 256678999999 999988866433 569999998875
No 149
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.94 E-value=1.8e-24 Score=199.70 Aligned_cols=324 Identities=7% Similarity=0.024 Sum_probs=208.8
Q ss_pred EEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCc---cEEEEEEeCCCCeEEEEcC---------CCeEEEEEC
Q 017194 20 CCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNG---PVTSLCFKSGNEDIIYVSS---------GKEVKSFDV 87 (375)
Q Consensus 20 ~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~---~v~~l~~~~~~~~l~~~~~---------d~~i~iwd~ 87 (375)
+++|+|+ +++++++ .|++|++||+.+++....+..|.. .+.+++|+|||++|++++. ++.|++||+
T Consensus 20 ~~~~s~d-g~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 20 FPNWISG-QEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCEESSS-SEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEECCC-CeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 6799999 6666554 689999999999998777765544 4899999999999998876 689999999
Q ss_pred CCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccce-----------------e
Q 017194 88 HMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSIC-----------------S 150 (375)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v-----------------~ 150 (375)
.+++.... ..+ ...+..++|+|||+.|+.+. ++.|++||+.+++..+....++...+ .
T Consensus 98 ~~g~~~~~-~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~ 172 (719)
T 1z68_A 98 SNGEFVRG-NEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKY 172 (719)
T ss_dssp TTTEECCS-SCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSC
T ss_pred CCCccccc-eec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcc
Confidence 97654211 111 24688999999999999985 68999999988766543321332222 4
Q ss_pred EEEEeeCCCcEEEEeecCC----------------------------------eEEEeeCCCCCcceEEecCCCCCCCCC
Q 017194 151 SVQFIPWKPWEVISGGLDS----------------------------------KLVMWDFSKGRPNKIVNFGLPENNGNA 196 (375)
Q Consensus 151 ~~~~~~~~~~~l~~~~~d~----------------------------------~i~~wd~~~~~~~~~~~~~~~~~~~~~ 196 (375)
+++|+|||+ .|++++.|. .|++||+.+++....+....+.
T Consensus 173 ~~~wSPDG~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~----- 246 (719)
T 1z68_A 173 ALWWSPNGK-FLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPA----- 246 (719)
T ss_dssp CEEECTTSS-EEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCH-----
T ss_pred cEEECCCCC-EEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCc-----
Confidence 899999999 677776542 7889999877653111111000
Q ss_pred CcccCCCceeEEeecCCccccCCCCEEEEEecC----CcEEEEe----CCCcceeeccc---ccCCCCCC-----ceeec
Q 017194 197 GQCYNPAFVHAIAIPDADMLDKTNKICVVAKGD----GVVDVIN----IESELNISRSK---STTKPLKG-----SQSTS 260 (375)
Q Consensus 197 ~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~d----g~i~i~d----~~~~~~~~~~~---~~~~~~~~-----~~~~s 260 (375)
....+...+..++|+| |++++++.... ..|.+|| +.+++...... ........ ...|+
T Consensus 247 ~~~~~~~~~~~~~~Sp------D~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s 320 (719)
T 1z68_A 247 MIASSDYYFSWLTWVT------DERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFS 320 (719)
T ss_dssp HHHTSCEEEEEEEESS------SSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEEC
T ss_pred cCCCCcceEEEeEEeC------CCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEEC
Confidence 0001356789999999 77777775433 2488899 77765444331 12222233 67899
Q ss_pred ccccceeeeee----------eecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecC----CCeEEEEeCCC--
Q 017194 261 KVNIRDAEMEI----------LDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGN----DKLVKVWDCSR-- 324 (375)
Q Consensus 261 ~~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~----dg~i~iwd~~~-- 324 (375)
|||+.++.... ++..... ...+..+...+..+.++ .++.+++++.. ++.+++|.+..
T Consensus 321 pdg~~l~~~~~~~~g~~~l~~~~~~~~~----~~~lt~~~~~v~~~~~~---d~~~i~~~~~~~~~~~~~~~l~~~~~~~ 393 (719)
T 1z68_A 321 YDAISYYKIFSDKDGYKHIHYIKDTVEN----AIQITSGKWEAINIFRV---TQDSLFYSSNEFEEYPGRRNIYRISIGS 393 (719)
T ss_dssp TTSSCEEEEEECTTSCEEEEEESSCSTT----CEECSCSSSCEEEEEEE---CSSEEEEEESCGGGCTTCBEEEEEECSS
T ss_pred CCCCeEEEEEEccCCceEEEEEECCCCc----eEecccCceEEEEEEEE---eCCEEEEEEecCCCCCceEEEEEEeCCC
Confidence 99997765211 1111111 22444555567777776 44444555544 57888988764
Q ss_pred ceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEE-eeCC--CeEEEEec
Q 017194 325 FQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVV-CDTS--KVVKVYSI 374 (375)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s-~~~d--g~v~iw~~ 374 (375)
+.... ..+...+.+|...+..+.|+| ++++++. ++.+ ..+.+|++
T Consensus 394 g~~~~----~~l~~~~~~~~~~~~~~~~s~-dg~~l~~~~s~~~~p~~~l~d~ 441 (719)
T 1z68_A 394 YPPSK----KCVTCHLRKERCQYYTASFSD-YAKYYALVCYGPGIPISTLHDG 441 (719)
T ss_dssp SSCCE----EESSTTTTTTTBCBEEEEECG-GGSSEEEEECCBSSCEEEEECS
T ss_pred CCCCc----eeccCccCCCCCceEEEEECC-CCCEEEEEcCCCCCCeEEEEEC
Confidence 21000 011111233667788899999 8877774 3333 46777765
No 150
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.94 E-value=1.7e-24 Score=182.31 Aligned_cols=287 Identities=8% Similarity=-0.008 Sum_probs=185.8
Q ss_pred EEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecC-ccEEEEEEeCCCCeEE-EEcCCCeEEEEECCCCCccccccc
Q 017194 21 CIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGN-GPVTSLCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLES 98 (375)
Q Consensus 21 ~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~ 98 (375)
++++++ +.++++++.++.|.+||+.+++.+..+..+. ..+..++|+|++++++ +...++.|.+||+.+++....+..
T Consensus 5 ~~~~~~-~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 5 PALKAG-HEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCTT-CEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred ccccCC-CEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 466776 7899999999999999999998888877543 2578999999998665 455688999999987654433332
Q ss_pred ccCC---CcceeEEEEcCCCCeEEEEeCC------------CcEEEEeCcCcee---eeeEecCcccceeEEEEeeCCCc
Q 017194 99 YNYN---KEEINQIVCNPKSSFLACADDG------------GDVKIIDIRQHCL---YKSLRAGHSSICSSVQFIPWKPW 160 (375)
Q Consensus 99 ~~~~---~~~v~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~ 160 (375)
.... ...+..++|+|+++++++++.+ +.|.+||+.+++. +..+. +...+.+++|+|+++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~- 160 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP--MPRQVYLMRAADDGS- 160 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE--CCSSCCCEEECTTSC-
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc--CCCcccceeECCCCc-
Confidence 1000 2337889999999999998865 8999999988543 34444 344688999999998
Q ss_pred EEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCC----CCccc---CC----CceeEEeecCCccccCCCCEEEEEe-c
Q 017194 161 EVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGN----AGQCY---NP----AFVHAIAIPDADMLDKTNKICVVAK-G 228 (375)
Q Consensus 161 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~----~~~~~---~~----~~v~~~~~~~~~~~~~~~~~l~~~~-~ 228 (375)
+++ ++ +.|.+||+.+++....+..+....... ....+ .. .....+++++ ++....... .
T Consensus 161 l~~-~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~~~~~~~~ 231 (349)
T 1jmx_B 161 LYV-AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK------DDKQDPATADL 231 (349)
T ss_dssp EEE-ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------------CCCEE
T ss_pred EEE-cc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecC------CCcCCcccccc
Confidence 555 33 349999999988777665431000000 00000 00 0122344433 111000000 0
Q ss_pred CCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCC-CCcE
Q 017194 229 DGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGE-RGKY 307 (375)
Q Consensus 229 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~~~~ 307 (375)
...+..+|..+++. . ...+..+...+..++++ | ++++
T Consensus 232 ~~~~~~~~~~~~~~--------------------------------------~-~~~~~~~~~~~~~~~~s---p~dg~~ 269 (349)
T 1jmx_B 232 LYGYLSVDLKTGKT--------------------------------------H-TQEFADLTELYFTGLRS---PKDPNQ 269 (349)
T ss_dssp EEEEEEEETTTCCE--------------------------------------E-EEEEEECSSCEEEEEEC---SSCTTE
T ss_pred ceeEEEEeccCCcE--------------------------------------E-ecccccCCCcceeeEec---CCCCCE
Confidence 00112234433210 0 01112245578899999 9 9999
Q ss_pred EEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 308 LISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 308 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
++++ ++.|.+||+.+++.. ..+. ....+.+++|+| ++++|++++.++.|++||++
T Consensus 270 l~~~--~~~v~~~d~~~~~~~---------~~~~-~~~~~~~~~~s~-dg~~l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 270 IYGV--LNRLAKYDLKQRKLI---------KAAN-LDHTYYCVAFDK-KGDKLYLGGTFNDLAVFNPD 324 (349)
T ss_dssp EEEE--ESEEEEEETTTTEEE---------EEEE-CSSCCCEEEECS-SSSCEEEESBSSEEEEEETT
T ss_pred EEEE--cCeEEEEECccCeEE---------EEEc-CCCCccceEECC-CCCEEEEecCCCeEEEEecc
Confidence 9988 889999999987432 2222 234567899999 88899988889999999974
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.94 E-value=5.6e-24 Score=179.10 Aligned_cols=261 Identities=10% Similarity=0.116 Sum_probs=177.8
Q ss_pred ecCCCceeEEEEecCCCCEEEEeC--CCCcEEEEecccCc--eeeEeeecCccEEEEEEeCCCCeEEEEc-CCCeEEEEE
Q 017194 12 RGHKATATCCIASRDRPGFVASSG--EDGCICWFDLRSKD--VQLVTDVGNGPVTSLCFKSGNEDIIYVS-SGKEVKSFD 86 (375)
Q Consensus 12 ~~h~~~i~~~~~~~~~~~~l~s~~--~d~~i~iw~~~~~~--~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~d~~i~iwd 86 (375)
..+...+..++|+|+ +++++++. .++.|.+|++.+++ .+..+..+...+..++|+|+|++|++++ .++.+.+|+
T Consensus 36 ~~~~~~p~~~a~spd-g~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 36 LAATQNPTYLALSAK-DCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EEECSCCCCEEECTT-CEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eeccCCcceEEEccC-CeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 345567788999998 77444443 26899999997765 3444455778889999999999888887 678999999
Q ss_pred CCCCCcccccccccC---------CCcceeEEEEcCCCCeEEEEeCCCcEEEEeCc-Cceee--eeEecCcccceeEEEE
Q 017194 87 VHMPASWRPLESYNY---------NKEEINQIVCNPKSSFLACADDGGDVKIIDIR-QHCLY--KSLRAGHSSICSSVQF 154 (375)
Q Consensus 87 ~~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~--~~~~~~~~~~v~~~~~ 154 (375)
+........+..... +...+.+++|+|+++++++...++.|.+|++. +++.. ..+.......+..++|
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~ 194 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVF 194 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEE
Confidence 964333333332211 12347889999999966666678899999998 45432 2223122336788999
Q ss_pred eeCCCcEEEEeecCCeEEEeeCCC--CCcc--eEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEE-EEecC
Q 017194 155 IPWKPWEVISGGLDSKLVMWDFSK--GRPN--KIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICV-VAKGD 229 (375)
Q Consensus 155 ~~~~~~~l~~~~~d~~i~~wd~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~-~~~~d 229 (375)
+|+|++++++...++.|.+|++.. ++.. ..+... +. .......+..++|+| ++++|+ +...+
T Consensus 195 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~-~~------~~~~~~~~~~i~~sp------dG~~l~v~~~~~ 261 (347)
T 3hfq_A 195 SPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTI-PA------DYTAHNGAAAIRLSH------DGHFLYVSNRGY 261 (347)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESS-CT------TCCSCCEEEEEEECT------TSCEEEEEEETT
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeec-CC------CCCCCCcceeEEECC------CCCEEEEEeCCC
Confidence 999985555667789999999874 4322 122211 00 000114578899999 798775 45568
Q ss_pred CcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEE
Q 017194 230 GVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLI 309 (375)
Q Consensus 230 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~ 309 (375)
+.|.+|++... .....+..+..+...+..++|+ |||++|+
T Consensus 262 ~~v~v~~~~~~-------------------------------------g~~~~~~~~~~~~~~~~~~~~s---pdg~~l~ 301 (347)
T 3hfq_A 262 NTLAVFAVTAD-------------------------------------GHLTLIQQISTEGDFPRDFDLD---PTEAFVV 301 (347)
T ss_dssp TEEEEEEECGG-------------------------------------GCEEEEEEEECSSSCCCEEEEC---TTSSEEE
T ss_pred CEEEEEEECCC-------------------------------------CcEEEeEEEecCCCCcCeEEEC---CCCCEEE
Confidence 99999998731 1123344555556667899999 9999888
Q ss_pred EecC-CCeEEEE--eCCCce
Q 017194 310 SGGN-DKLVKVW--DCSRFQ 326 (375)
Q Consensus 310 s~~~-dg~i~iw--d~~~~~ 326 (375)
+++. ++.|.+| |..+++
T Consensus 302 v~~~~~~~v~v~~~d~~tg~ 321 (347)
T 3hfq_A 302 VVNQNTDNATLYARDLTSGK 321 (347)
T ss_dssp EEETTTTEEEEEEECTTTCC
T ss_pred EEEcCCCcEEEEEEeCCCCe
Confidence 7765 5899999 445553
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.94 E-value=2.8e-23 Score=175.73 Aligned_cols=279 Identities=11% Similarity=0.106 Sum_probs=186.3
Q ss_pred CEEEEe----CCCCcEEEEecc--cCceeeEeeecCccEEEEEEeCCCCeEEEEcCC----CeEEEEECCCC-Ccccccc
Q 017194 29 GFVASS----GEDGCICWFDLR--SKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSG----KEVKSFDVHMP-ASWRPLE 97 (375)
Q Consensus 29 ~~l~s~----~~d~~i~iw~~~--~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d----~~i~iwd~~~~-~~~~~~~ 97 (375)
.+++.| +.++.|.+|.+. +++.......+...+..++|+|++++|++++.+ +.|.+|++... .....+.
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~ 93 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLN 93 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEE
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEee
Confidence 345555 346789999774 455433222267778889999999999998875 79999998753 2334444
Q ss_pred cccCCCcceeEEEEcCCCCeEEEEe-CCCcEEEEeCcCceeeeeE----ec-C--------cccceeEEEEeeCCCcEEE
Q 017194 98 SYNYNKEEINQIVCNPKSSFLACAD-DGGDVKIIDIRQHCLYKSL----RA-G--------HSSICSSVQFIPWKPWEVI 163 (375)
Q Consensus 98 ~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~----~~-~--------~~~~v~~~~~~~~~~~~l~ 163 (375)
....+......+++ ++++|++++ .++.|.+|++.....+..+ .. + +...+.+++|+|+++++++
T Consensus 94 ~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~ 171 (361)
T 3scy_A 94 TQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLA 171 (361)
T ss_dssp EEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEE
T ss_pred EeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEE
Confidence 44334456677777 787777766 6789999999754322211 10 1 1223578999999985555
Q ss_pred EeecCCeEEEeeCCCCCc------c------eEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe-cCC
Q 017194 164 SGGLDSKLVMWDFSKGRP------N------KIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK-GDG 230 (375)
Q Consensus 164 ~~~~d~~i~~wd~~~~~~------~------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~-~dg 230 (375)
+...++.|.+|++..... + ...... ....+..++|+| +++++++++ .++
T Consensus 172 ~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~------------~~~~~~~~~~sp------dg~~l~v~~~~~~ 233 (361)
T 3scy_A 172 DDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVA------------PGSGPRHLIFNS------DGKFAYLINEIGG 233 (361)
T ss_dssp EETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECC------------TTCCEEEEEECT------TSSEEEEEETTTC
T ss_pred EeCCCCEEEEEEEcCCCCcccccceeecccccceecC------------CCCCCeEEEEcC------CCCEEEEEcCCCC
Confidence 555689999999875442 2 122222 234578899999 799887777 689
Q ss_pred cEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEE
Q 017194 231 VVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLIS 310 (375)
Q Consensus 231 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s 310 (375)
.|.+|++.++... ....+.....+......++|+ |||++|++
T Consensus 234 ~v~v~~~~~g~~~-----------------------------------~~~~~~~~~~~~~~~~~i~~s---pdg~~l~v 275 (361)
T 3scy_A 234 TVIAFRYADGMLD-----------------------------------EIQTVAADTVNAQGSGDIHLS---PDGKYLYA 275 (361)
T ss_dssp EEEEEEEETTEEE-----------------------------------EEEEEESCSSCCCCEEEEEEC---TTSSEEEE
T ss_pred eEEEEEecCCceE-----------------------------------EeEEEecCCCCCCCcccEEEC---CCCCEEEE
Confidence 9999999854211 011122333444557899999 99998866
Q ss_pred ecC--CCeEEEEeCC--CceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEee-CCCeEEEEec
Q 017194 311 GGN--DKLVKVWDCS--RFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCD-TSKVVKVYSI 374 (375)
Q Consensus 311 ~~~--dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~v~iw~~ 374 (375)
+.. ++.|.+|++. +++. ..+..... ...+..++|+| +|++|++++ .++.|.+|++
T Consensus 276 ~~~~~~~~i~v~~~~~~~g~~-------~~~~~~~~-g~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 276 SNRLKADGVAIFKVDETNGTL-------TKVGYQLT-GIHPRNFIITP-NGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp EECSSSCEEEEEEECTTTCCE-------EEEEEEEC-SSCCCEEEECT-TSCEEEEEETTTTEEEEEEE
T ss_pred ECCCCCCEEEEEEEcCCCCcE-------EEeeEecC-CCCCceEEECC-CCCEEEEEECCCCCEEEEEE
Confidence 655 5899999996 3321 12222222 45678899999 999888887 6799999765
No 153
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=4.8e-24 Score=178.68 Aligned_cols=250 Identities=13% Similarity=0.100 Sum_probs=182.4
Q ss_pred CCCCCeeeecCC-C-ceeEEEEecCCCC-EEEEeCCCCcEEEEecccCceeeEeeec-----CccEEEEEEeCCCCeEEE
Q 017194 4 AEAKPRRLRGHK-A-TATCCIASRDRPG-FVASSGEDGCICWFDLRSKDVQLVTDVG-----NGPVTSLCFKSGNEDIIY 75 (375)
Q Consensus 4 ~~~~~~~l~~h~-~-~i~~~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~-----~~~v~~l~~~~~~~~l~~ 75 (375)
+++.+..+.... . .+.+++|+|+ ++ +++++..++.|.+||+.+++.+..+... ...+..++|+|+++++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 98 (337)
T 1pby_B 20 KMAVDKVITIADAGPTPMVPMVAPG-GRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAI 98 (337)
T ss_dssp TTEEEEEEECTTCTTCCCCEEECTT-SSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEE
T ss_pred CCcEEEEEEcCCCCCCccceEEcCC-CCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEE
Confidence 344445554222 2 4788999999 65 4567777899999999999887766532 226778999999999888
Q ss_pred Ec------------CCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEec
Q 017194 76 VS------------SGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRA 143 (375)
Q Consensus 76 ~~------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 143 (375)
+. .++.|.+||+.+++....+.. ...+..++|+|++++|+++ ++.|.+||+.+++.+..+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~- 171 (337)
T 1pby_B 99 YESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA----PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKP- 171 (337)
T ss_dssp EEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC----CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEEC-
T ss_pred EecccccccccccccCceEEEEECCCCcEEEEEeC----CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeee-
Confidence 86 579999999987654433332 3467889999999988888 6889999999998887776
Q ss_pred CcccceeEEEEeeCCCcEEEEeecCC-----------------------eEEEeeCCCCCcceEEecCCCCCCCCCCccc
Q 017194 144 GHSSICSSVQFIPWKPWEVISGGLDS-----------------------KLVMWDFSKGRPNKIVNFGLPENNGNAGQCY 200 (375)
Q Consensus 144 ~~~~~v~~~~~~~~~~~~l~~~~~d~-----------------------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (375)
.+. ....+.|+|++..+++++..++ .|.+||+.+++.. .+....
T Consensus 172 ~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~----------- 238 (337)
T 1pby_B 172 IQS-WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRI----------- 238 (337)
T ss_dssp STT-TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEE-----------
T ss_pred ccc-cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCC-----------
Confidence 333 1123378999885444443333 4689999988765 333220
Q ss_pred CCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCccee
Q 017194 201 NPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRL 280 (375)
Q Consensus 201 ~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~ 280 (375)
+...+..++|+| ++++++++ ++.|.+||+.+++.
T Consensus 239 ~~~~~~~~~~s~------dg~~l~~~--~~~v~~~d~~~~~~-------------------------------------- 272 (337)
T 1pby_B 239 MDVFYFSTAVNP------AKTRAFGA--YNVLESFDLEKNAS-------------------------------------- 272 (337)
T ss_dssp CSSCEEEEEECT------TSSEEEEE--ESEEEEEETTTTEE--------------------------------------
T ss_pred CCCceeeEEECC------CCCEEEEe--CCeEEEEECCCCcC--------------------------------------
Confidence 235678899999 79998888 68999999987422
Q ss_pred EeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCce
Q 017194 281 HLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQ 326 (375)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~ 326 (375)
+..+.. ...+.+++|+ |+|++|++++.++.|++||+.+++
T Consensus 273 --~~~~~~-~~~~~~~~~s---~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 273 --IKRVPL-PHSYYSVNVS---TDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp --EEEEEC-SSCCCEEEEC---TTSCEEEEESBSSEEEEEETTTCC
T ss_pred --cceecC-CCceeeEEEC---CCCCEEEEEcCCCcEEEEECcCCc
Confidence 112222 2356789999 999999999999999999999884
No 154
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.93 E-value=7e-24 Score=181.34 Aligned_cols=294 Identities=13% Similarity=0.064 Sum_probs=196.9
Q ss_pred cCCCCCeeeecCCCceeE-----EEEecCCCCEEEEeCC-CC--cEEEEecccCceeeEeeecCccEEEEEEeCCCCeEE
Q 017194 3 DAEAKPRRLRGHKATATC-----CIASRDRPGFVASSGE-DG--CICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDII 74 (375)
Q Consensus 3 ~~~~~~~~l~~h~~~i~~-----~~~~~~~~~~l~s~~~-d~--~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~ 74 (375)
.++..+..+..|...... .+|+|| +++|+.++. ++ .|.+||+.+++.......+...+..+.|+|+++.|+
T Consensus 18 ~~g~~~~~lt~~~~~~~~~~~~~~~~SpD-g~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~ 96 (388)
T 3pe7_A 18 STGAQVTRLTPPDVTCHRNYFYQKCFTRD-GSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALF 96 (388)
T ss_dssp TTCCEEEECSCTTSCEECCCTTSCCBCTT-SCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEE
T ss_pred CCCcceEEecCCcccccchhhcCccCCCC-CCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEE
Confidence 466777888888766666 889999 888887776 66 488889998887777666666666788999999999
Q ss_pred EEcCCCeEEEEECCCCCcccccccccCCCcceeEE--EEcCCCCeEEEEe----------------------CCCcEEEE
Q 017194 75 YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQI--VCNPKSSFLACAD----------------------DGGDVKII 130 (375)
Q Consensus 75 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~l~~~~----------------------~dg~i~iw 130 (375)
.++.++.|++||+.+++...... .+...+... .++|++++++... .+..|++|
T Consensus 97 ~~~~~~~l~~~d~~~g~~~~~~~---~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (388)
T 3pe7_A 97 YVKDGRNLMRVDLATLEENVVYQ---VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRV 173 (388)
T ss_dssp EEETTTEEEEEETTTCCEEEEEE---CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEE
T ss_pred EEeCCCeEEEEECCCCcceeeee---chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEE
Confidence 99999999999999875433222 223334333 3589998887432 34679999
Q ss_pred eCcCceeeeeEecCcccceeEEEEee-CCCcEEEEeecC------CeEEEeeCCCCCcceEEecCCCCCCCCCCcccCC-
Q 017194 131 DIRQHCLYKSLRAGHSSICSSVQFIP-WKPWEVISGGLD------SKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNP- 202 (375)
Q Consensus 131 d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~- 202 (375)
|+.+++..... .+...+..++|+| +++ .|+....+ ..|.++|+..++. ..+... ..
T Consensus 174 d~~~g~~~~l~--~~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~------------~~~ 237 (388)
T 3pe7_A 174 DLKTGESTVIL--QENQWLGHPIYRPYDDS-TVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTH------------AEG 237 (388)
T ss_dssp ETTTCCEEEEE--EESSCEEEEEEETTEEE-EEEEEECSCTTTSSCSEEEEETTSCCC-EESCCC------------CTT
T ss_pred ECCCCceEEee--cCCccccccEECCCCCC-EEEEEEecCCCCCcceEEEEeCCCCce-EEeeeC------------CCC
Confidence 99988665444 3667789999999 988 56655543 3788888765443 333211 11
Q ss_pred CceeEEeecCCccccCCCCEEEEEec-CC----cEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCc
Q 017194 203 AFVHAIAIPDADMLDKTNKICVVAKG-DG----VVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGG 277 (375)
Q Consensus 203 ~~v~~~~~~~~~~~~~~~~~l~~~~~-dg----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~ 277 (375)
..+..++|+| +|+.|+..+. ++ .|++||+.+++...
T Consensus 238 ~~~~~~~~sp------dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~--------------------------------- 278 (388)
T 3pe7_A 238 ESCTHEFWVP------DGSALVYVSYLKGSPDRFIYSADPETLENRQ--------------------------------- 278 (388)
T ss_dssp EEEEEEEECT------TSSCEEEEEEETTCCCEEEEEECTTTCCEEE---------------------------------
T ss_pred cccccceECC------CCCEEEEEecCCCCCcceEEEEecCCCceEE---------------------------------
Confidence 2577889999 7887765443 22 39999998754221
Q ss_pred ceeEeeeeecCCCcc---EEEEEEeecCCCCcEEEEe---------cCCCeEEEEeCCCceeeeecchhhhhhhhccccc
Q 017194 278 KRLHLDYSVGGHTAA---ASCVAFSMFGERGKYLISG---------GNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNK 345 (375)
Q Consensus 278 ~~~~~~~~~~~~~~~---v~~~~~s~~~~~~~~l~s~---------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 345 (375)
+..+.++... ...++|+ |||+.|+.. ..+..|++||+.+++. ..+..+..
T Consensus 279 -----l~~~~~~~~~~~~~~~~~~s---pdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~----------~~l~~~~~ 340 (388)
T 3pe7_A 279 -----LTSMPACSHLMSNYDGSLMV---GDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ----------HRVARHDT 340 (388)
T ss_dssp -----EEEECCEEEEEECTTSSEEE---EEECCC------------CCCCEEEEEETTTTEE----------EEEEECCC
T ss_pred -----EEcCCCceeeeecCCCCeEc---cCCCcceeEeeeccccccCCCCEEEEEeccCCce----------EEeccccC
Confidence 1111111000 0112678 888877753 4567899999998742 12333333
Q ss_pred -----------ceeeeeecCCCCCcEEEee-CCCeEEEEec
Q 017194 346 -----------KVNWLCTTPTESENLVVCD-TSKVVKVYSI 374 (375)
Q Consensus 346 -----------~v~~~~~~~~~~~~l~s~~-~dg~v~iw~~ 374 (375)
.+..++|+| ||+.|+..+ .+|...+|.+
T Consensus 341 ~~~~~~~~~~~~~~~~~~sp-Dg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 341 SWKVFEGDRQVTHPHPSFTP-DDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp CCCCBTTBSSTTCCCCEECT-TSSEEEEEECTTSSCEEEEE
T ss_pred cccccccccccCCCCccCCC-CCCEEEEEecCCCceeEEEE
Confidence 577889999 998887665 5677777654
No 155
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=1.4e-22 Score=171.01 Aligned_cols=241 Identities=10% Similarity=0.083 Sum_probs=181.6
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCC-EEEEeCCCCcEEEEecccCceeeEeeecCcc---------EEEEEEeCCCCeE
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPG-FVASSGEDGCICWFDLRSKDVQLVTDVGNGP---------VTSLCFKSGNEDI 73 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~---------v~~l~~~~~~~~l 73 (375)
+++.+..+.. ...+..++|+|+ ++ ++++...++.|.+||..+++.+..+..+... +.+++|+|+++++
T Consensus 78 ~~~~~~~~~~-~~~~~~~~~s~d-g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 155 (353)
T 3vgz_A 78 TLEVTQAIHN-DLKPFGATINNT-TQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTV 155 (353)
T ss_dssp TCCEEEEEEE-SSCCCSEEEETT-TTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEE
T ss_pred CCeEEEEEec-CCCcceEEECCC-CCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEE
Confidence 3444455543 345778999999 66 5666677899999999999988887764322 7889999999988
Q ss_pred EEEc--CCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEec---Ccccc
Q 017194 74 IYVS--SGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRA---GHSSI 148 (375)
Q Consensus 74 ~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~~ 148 (375)
++++ .++.|.+||..+++....+. .+...+..++|+|+++++++++.++.|.+||+.+++.+..+.. ++...
T Consensus 156 ~~~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 232 (353)
T 3vgz_A 156 YISGIGKESVIWVVDGGNIKLKTAIQ---NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHF 232 (353)
T ss_dssp EEEEESSSCEEEEEETTTTEEEEEEC---CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCC
T ss_pred EEEecCCCceEEEEcCCCCceEEEec---CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcc
Confidence 7776 47899999998765443333 2345688899999999999999999999999999988877762 24556
Q ss_pred eeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe-
Q 017194 149 CSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK- 227 (375)
Q Consensus 149 v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~- 227 (375)
+..++|+|+++.++++...++.|.+||+.+++.+..+..+ . ...++|+| +++.+++++
T Consensus 233 ~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~--------------~-~~~~~~s~------dg~~l~v~~~ 291 (353)
T 3vgz_A 233 FINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP--------------E-SLAVLFNP------ARNEAYVTHR 291 (353)
T ss_dssp EEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS--------------S-CCCEEEET------TTTEEEEEET
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC--------------C-CceEEECC------CCCEEEEEEC
Confidence 7889999999854555556699999999999988888754 1 25688998 788666555
Q ss_pred cCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcE
Q 017194 228 GDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKY 307 (375)
Q Consensus 228 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~ 307 (375)
.++.|.+||..+++. +..+.. ...+..++|+ |+|++
T Consensus 292 ~~~~v~~~d~~~~~~----------------------------------------~~~~~~-~~~~~~~~~s---~dg~~ 327 (353)
T 3vgz_A 292 QAGKVSVIDAKSYKV----------------------------------------VKTFDT-PTHPNSLALS---ADGKT 327 (353)
T ss_dssp TTTEEEEEETTTTEE----------------------------------------EEEEEC-CSEEEEEEEC---TTSCE
T ss_pred CCCeEEEEECCCCeE----------------------------------------EEEEec-CCCCCeEEEc---CCCCE
Confidence 689999999987532 222222 2367889999 89987
Q ss_pred EEEecCC
Q 017194 308 LISGGND 314 (375)
Q Consensus 308 l~s~~~d 314 (375)
|+.+..+
T Consensus 328 l~v~~~~ 334 (353)
T 3vgz_A 328 LYVSVKQ 334 (353)
T ss_dssp EEEEEEC
T ss_pred EEEEEcc
Confidence 7766554
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.93 E-value=2.9e-22 Score=169.50 Aligned_cols=273 Identities=13% Similarity=0.128 Sum_probs=177.9
Q ss_pred CCCceeEEEEecCCCCEEEEeCCC----CcEEEEeccc--Cce--eeEeeecCccEEEEEEeCCCCeEEEEc-CCCeEEE
Q 017194 14 HKATATCCIASRDRPGFVASSGED----GCICWFDLRS--KDV--QLVTDVGNGPVTSLCFKSGNEDIIYVS-SGKEVKS 84 (375)
Q Consensus 14 h~~~i~~~~~~~~~~~~l~s~~~d----~~i~iw~~~~--~~~--~~~~~~~~~~v~~l~~~~~~~~l~~~~-~d~~i~i 84 (375)
+......++|+|+ +++|++++.+ +.|.+|++.. ++. +.....+......+++ ++++|++++ .++.+.+
T Consensus 48 ~~~~p~~l~~spd-g~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~ 124 (361)
T 3scy_A 48 EVANPSYLIPSAD-GKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITV 124 (361)
T ss_dssp ECSCCCSEEECTT-SSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEE
T ss_pred cCCCCceEEECCC-CCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEE
Confidence 5677788999999 8888888775 7999999876 332 3333335566777887 788777766 5789999
Q ss_pred EECCCCCcccccccc---c--------CCCcceeEEEEcCCCCeEEEEe-CCCcEEEEeCcCcee------e------ee
Q 017194 85 FDVHMPASWRPLESY---N--------YNKEEINQIVCNPKSSFLACAD-DGGDVKIIDIRQHCL------Y------KS 140 (375)
Q Consensus 85 wd~~~~~~~~~~~~~---~--------~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~------~------~~ 140 (375)
|++........+... . .+...+.+++|+|+++++++++ .++.|.+|++..... + ..
T Consensus 125 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 125 FPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp EEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred EEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccc
Confidence 999754433322211 1 1123457899999999776655 578999998875431 1 12
Q ss_pred EecCcccceeEEEEeeCCCcEEEEee-cCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCC
Q 017194 141 LRAGHSSICSSVQFIPWKPWEVISGG-LDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKT 219 (375)
Q Consensus 141 ~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 219 (375)
+...+...+..++|+|+++ ++++++ .++.|.+||+.+++.......... ..+......++|+| +
T Consensus 205 ~~~~~~~~~~~~~~spdg~-~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~--------~~~~~~~~~i~~sp------d 269 (361)
T 3scy_A 205 FKVAPGSGPRHLIFNSDGK-FAYLINEIGGTVIAFRYADGMLDEIQTVAAD--------TVNAQGSGDIHLSP------D 269 (361)
T ss_dssp EECCTTCCEEEEEECTTSS-EEEEEETTTCEEEEEEEETTEEEEEEEEESC--------SSCCCCEEEEEECT------T
T ss_pred eecCCCCCCeEEEEcCCCC-EEEEEcCCCCeEEEEEecCCceEEeEEEecC--------CCCCCCcccEEECC------C
Confidence 2213455678999999998 455544 789999999987654222211100 00123457999999 8
Q ss_pred CCEEEEEecC--CcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEE
Q 017194 220 NKICVVAKGD--GVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVA 297 (375)
Q Consensus 220 ~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 297 (375)
+++|+++..+ +.|.+|++... ......+..+.. ...+..++
T Consensus 270 g~~l~v~~~~~~~~i~v~~~~~~------------------------------------~g~~~~~~~~~~-g~~~~~~~ 312 (361)
T 3scy_A 270 GKYLYASNRLKADGVAIFKVDET------------------------------------NGTLTKVGYQLT-GIHPRNFI 312 (361)
T ss_dssp SSEEEEEECSSSCEEEEEEECTT------------------------------------TCCEEEEEEEEC-SSCCCEEE
T ss_pred CCEEEEECCCCCCEEEEEEEcCC------------------------------------CCcEEEeeEecC-CCCCceEE
Confidence 9988777654 89999998621 001122223333 45677899
Q ss_pred EeecCCCCcEEEEec-CCCeEEEEeCC--Cceeeeecchhhhhhhh-cccccceeeeeec
Q 017194 298 FSMFGERGKYLISGG-NDKLVKVWDCS--RFQGVQTSINNDLLIKN-INLNKKVNWLCTT 353 (375)
Q Consensus 298 ~s~~~~~~~~l~s~~-~dg~i~iwd~~--~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~ 353 (375)
|+ |+|++|++++ .++.|.+|++. +++ +.... ..+...+.|++|.
T Consensus 313 ~s---pdg~~l~~~~~~~~~v~v~~~d~~~g~---------~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 313 IT---PNGKYLLVACRDTNVIQIFERDQATGL---------LTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EC---TTSCEEEEEETTTTEEEEEEECTTTCC---------EEECSCCEECSSEEEEEEE
T ss_pred EC---CCCCEEEEEECCCCCEEEEEEECCCCc---------EeecceeeeCCCCeEEEEc
Confidence 99 9999888776 67899996554 552 21111 2234567777774
No 157
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.92 E-value=2.8e-23 Score=191.92 Aligned_cols=293 Identities=13% Similarity=0.065 Sum_probs=192.3
Q ss_pred CCCCCeeeecCCC---ceeEEEEecCCCCEEEEeCCC---------CcEEEEecccCceeeEee---ecCccEEEEEEeC
Q 017194 4 AEAKPRRLRGHKA---TATCCIASRDRPGFVASSGED---------GCICWFDLRSKDVQLVTD---VGNGPVTSLCFKS 68 (375)
Q Consensus 4 ~~~~~~~l~~h~~---~i~~~~~~~~~~~~l~s~~~d---------~~i~iw~~~~~~~~~~~~---~~~~~v~~l~~~~ 68 (375)
+++....+.+|.. .|.+++|+|| +++|++++.+ +.|.+||+.+++. ..+. .|...+..++|+|
T Consensus 46 ~g~~~~~~~~~~~~~~~v~~~~~SpD-g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SP 123 (723)
T 1xfd_A 46 TNTSTVLIEGKKIESLRAIRYEISPD-REYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGP 123 (723)
T ss_dssp GCCCEEEECTTTTTTTTCSEEEECTT-SSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCS
T ss_pred CCcEEEEeccccccccccceEEECCC-CCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECC
Confidence 4455556666665 4999999999 8999988764 7888999998876 3333 3445588999999
Q ss_pred CCCeEEEEcCCCeEEEEECCCCCcccccccccCCCc------------------ceeEEEEcCCCCeEEEEeCCC-----
Q 017194 69 GNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKE------------------EINQIVCNPKSSFLACADDGG----- 125 (375)
Q Consensus 69 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~~~~~dg----- 125 (375)
||+.|++++. +.|++||+.+++....... +.. .+.+++|+|||++|++++.++
T Consensus 124 dG~~la~~~~-~~i~~~~~~~g~~~~~~~~---~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~ 199 (723)
T 1xfd_A 124 KGQQLIFIFE-NNIYYCAHVGKQAIRVVST---GKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPI 199 (723)
T ss_dssp STTCEEEEET-TEEEEESSSSSCCEEEECC---CBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCE
T ss_pred CCCEEEEEEC-CeEEEEECCCCceEEEecC---CCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccce
Confidence 9999999885 7999999987654332221 122 237899999999999887543
Q ss_pred -----------------------------cEEEEeCcCceeeeeEecCc------ccceeEEEEeeCCCcEEEEeec---
Q 017194 126 -----------------------------DVKIIDIRQHCLYKSLRAGH------SSICSSVQFIPWKPWEVISGGL--- 167 (375)
Q Consensus 126 -----------------------------~i~iwd~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~~--- 167 (375)
.|++||+.+++....+. .+ ...+..++|+|+|+ ++++...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~-~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~ 277 (723)
T 1xfd_A 200 MELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMM-PPDDPRMREYYITMVKWATSTK-VAVTWLNRAQ 277 (723)
T ss_dssp EEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECC-CCCCGGGSSEEEEEEEESSSSE-EEEEEEETTS
T ss_pred EEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEee-CCccCCCccceeEEEEEeCCCe-EEEEEEcCCC
Confidence 79999998887655555 43 56889999999998 5655543
Q ss_pred -CCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCce----eEEeecCCccccCCCCEEEEE--ecCC------cEEE
Q 017194 168 -DSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFV----HAIAIPDADMLDKTNKICVVA--KGDG------VVDV 234 (375)
Q Consensus 168 -d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~~~~~~~l~~~--~~dg------~i~i 234 (375)
+..|++||+.+++....+... +...+ ..++|+| +|+.|+.. ..++ .|.+
T Consensus 278 ~~~~i~~~d~~~g~~~~~~~~~------------~~~~~~~~~~~~~~sp------dg~~l~~~~~~~~~~~~~~~~l~~ 339 (723)
T 1xfd_A 278 NVSILTLCDATTGVCTKKHEDE------------SEAWLHRQNEEPVFSK------DGRKFFFIRAIPQGGRGKFYHITV 339 (723)
T ss_dssp CEEEEEEEETTTCCEEEEEEEE------------CSSCCCCCCCCCEECT------TSCSEEEEEEECCSSSSCEEEEEE
T ss_pred CeEEEEEEeCCCCcceEEEEec------------cCCEEeccCCCceEcC------CCCeEEEEEecccCCCcceeEEEE
Confidence 357999999988876655422 12233 3778998 78877754 4566 5777
Q ss_pred Ee-CCCcce--eecccccCCCCCCceeecccccceeeeeeee---------cCCcceeEeeeeecC---CCccEEEEEEe
Q 017194 235 IN-IESELN--ISRSKSTTKPLKGSQSTSKVNIRDAEMEILD---------QSGGKRLHLDYSVGG---HTAAASCVAFS 299 (375)
Q Consensus 235 ~d-~~~~~~--~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~v~~~~~s 299 (375)
|| ..++.. ..............++|+|||+.+++.+..+ ...... .....+.. |...+..++|+
T Consensus 340 ~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~s 418 (723)
T 1xfd_A 340 SSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGN-FNRQCLSCDLVENCTYFSASFS 418 (723)
T ss_dssp ECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTT-CCCBCSSTTSSSSCCCCEEEEC
T ss_pred EeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCC-CCcceecccccCCCCeEEEEEC
Confidence 77 343330 2222211111122358999999987643221 110000 01112332 56678899999
Q ss_pred ecCCCCcEEEEecC-CC--eEEEEeCCCce
Q 017194 300 MFGERGKYLISGGN-DK--LVKVWDCSRFQ 326 (375)
Q Consensus 300 ~~~~~~~~l~s~~~-dg--~i~iwd~~~~~ 326 (375)
|||++|+.... .+ ...+++..++.
T Consensus 419 ---pdg~~l~~~~~~~~~p~~~~~~~~~~~ 445 (723)
T 1xfd_A 419 ---HSMDFFLLKCEGPGVPMVTVHNTTDKK 445 (723)
T ss_dssp ---TTSSEEEEECCSSSSCCEEEEETTTCC
T ss_pred ---CCCCEEEEEccCCCCCeEEEEECCCCC
Confidence 99998876432 22 23445654444
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.92 E-value=2.1e-23 Score=187.73 Aligned_cols=232 Identities=10% Similarity=-0.019 Sum_probs=172.4
Q ss_pred CccEEEEEEeCCCCeEEEEcC-CCeEEEEECCCCCcccccccccCCC-cceeEEEEcCCCCeEEEEeC---CCcEEEEeC
Q 017194 58 NGPVTSLCFKSGNEDIIYVSS-GKEVKSFDVHMPASWRPLESYNYNK-EEINQIVCNPKSSFLACADD---GGDVKIIDI 132 (375)
Q Consensus 58 ~~~v~~l~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~ 132 (375)
..+|.+++|+|||+.|++++. |++++||++.+++. ..+ ..+. ..+..++|+|| +.+++++. +....+|.+
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~-~~l---t~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET-VKL---NREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE-EEC---CSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc-Eee---ecccccccccccCCCC-eEEEEeccCCCCcceEEEEE
Confidence 568999999999999999887 99999999865432 222 2233 58999999999 77777764 454566554
Q ss_pred cC---ceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEe
Q 017194 133 RQ---HCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIA 209 (375)
Q Consensus 133 ~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 209 (375)
.. +... .+. ....+...+|+|+++.++++.+.++.+.+||+.+++....... +. .+++
T Consensus 96 ~~~~~g~~~-~l~--~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~--------------~~--~~~~ 156 (582)
T 3o4h_A 96 NTSRPGEEQ-RLE--AVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARL--------------PG--FGFV 156 (582)
T ss_dssp ETTSTTCCE-ECT--TSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEE--------------SS--CEEE
T ss_pred eccCCCccc-ccc--CCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecC--------------CC--ceEE
Confidence 33 2222 333 2223456789999875555555555666999998866554432 12 7889
Q ss_pred ecCCccccCCCCEEEEEecC----CcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeee
Q 017194 210 IPDADMLDKTNKICVVAKGD----GVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYS 285 (375)
Q Consensus 210 ~~~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~ 285 (375)
|+| ||++++.++.+ +.|++||+.+++ ...
T Consensus 157 ~sp------DG~~la~~~~~~~~~~~i~~~d~~~g~-----------------------------------------~~~ 189 (582)
T 3o4h_A 157 SDI------RGDLIAGLGFFGGGRVSLFTSNLSSGG-----------------------------------------LRV 189 (582)
T ss_dssp EEE------ETTEEEEEEEEETTEEEEEEEETTTCC-----------------------------------------CEE
T ss_pred ECC------CCCEEEEEEEcCCCCeEEEEEcCCCCC-----------------------------------------ceE
Confidence 999 89999988876 789999998742 125
Q ss_pred ecCCCccEEEEEEeecCCCCcEEEEecCCC--eEEEEeCCCceeeeecchhhhhhhhcccccceeeee--------ecCC
Q 017194 286 VGGHTAAASCVAFSMFGERGKYLISGGNDK--LVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLC--------TTPT 355 (375)
Q Consensus 286 ~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~ 355 (375)
+..|...+..++|| |||++|+++..++ .|++||+.+++ .. .+.+|...+..++ |+|
T Consensus 190 l~~~~~~~~~~~~S---pDG~~l~~~~~~~~~~i~~~d~~~~~---------~~-~~~~~~~~~~~~~~~~~~~~~~sp- 255 (582)
T 3o4h_A 190 FDSGEGSFSSASIS---PGMKVTAGLETAREARLVTVDPRDGS---------VE-DLELPSKDFSSYRPTAITWLGYLP- 255 (582)
T ss_dssp ECCSSCEEEEEEEC---TTSCEEEEEECSSCEEEEEECTTTCC---------EE-ECCCSCSHHHHHCCSEEEEEEECT-
T ss_pred eecCCCccccceEC---CCCCEEEEccCCCeeEEEEEcCCCCc---------EE-EccCCCcChhhhhhccccceeEcC-
Confidence 56778889999999 9999999888888 89999999873 33 4556666666677 999
Q ss_pred CCCcEEEeeCCCeEEEEec
Q 017194 356 ESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 356 ~~~~l~s~~~dg~v~iw~~ 374 (375)
||.++++++.|+.+++|++
T Consensus 256 dg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 256 DGRLAVVARREGRSAVFID 274 (582)
T ss_dssp TSCEEEEEEETTEEEEEET
T ss_pred CCcEEEEEEcCCcEEEEEE
Confidence 8888899999999999985
No 159
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=5.6e-22 Score=170.91 Aligned_cols=160 Identities=16% Similarity=0.104 Sum_probs=128.1
Q ss_pred CCCceeEEEEecCCCCEEE----EeCCCCcEEEEecccC--------ce---eeEeeecCccEEEEEEeCC-CCeEEEEc
Q 017194 14 HKATATCCIASRDRPGFVA----SSGEDGCICWFDLRSK--------DV---QLVTDVGNGPVTSLCFKSG-NEDIIYVS 77 (375)
Q Consensus 14 h~~~i~~~~~~~~~~~~l~----s~~~d~~i~iw~~~~~--------~~---~~~~~~~~~~v~~l~~~~~-~~~l~~~~ 77 (375)
|.+.|++++|+|+ +++|+ +|+.|++|+|||+.++ +. ...+.+|...|.+++|+|+ +.+|++++
T Consensus 91 ~~~~v~~l~~spd-g~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 91 MKFPIHHLALSCD-NLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CSSCEEEEEECTT-SCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred CCCcccEEEEcCC-CCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 5678999999999 88988 8999999999998765 22 3455679999999999998 78999999
Q ss_pred CCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCc-------cccee
Q 017194 78 SGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGH-------SSICS 150 (375)
Q Consensus 78 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-------~~~v~ 150 (375)
.||+|++||++++.. +....+|...|.+++|+|++++|++|+.||.|++||++ ++....+. .| ...|.
T Consensus 170 ~Dg~v~iwD~~~~~~---~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~-~~~~~~~~~~~~v~ 244 (434)
T 2oit_A 170 ADGSIAVLQVTETVK---VCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIP-CPPFYESDHPVRVL 244 (434)
T ss_dssp TTSCEEEEEESSSEE---EEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEEC-CCTTCCTTSCEEEE
T ss_pred CCCeEEEEEcCCCcc---eeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cccccccc-CCcccCCCCceeEE
Confidence 999999999987532 23334578899999999999999999999999999998 55555554 33 33899
Q ss_pred EEEEeeCCCcEEEEeecCC------eEEEeeCCCC
Q 017194 151 SVQFIPWKPWEVISGGLDS------KLVMWDFSKG 179 (375)
Q Consensus 151 ~~~~~~~~~~~l~~~~~d~------~i~~wd~~~~ 179 (375)
+++|++++.++++....+| .+++|++++.
T Consensus 245 ~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 245 DVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 9999998763333344443 3899999865
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.90 E-value=1.9e-21 Score=164.54 Aligned_cols=280 Identities=13% Similarity=0.090 Sum_probs=179.1
Q ss_pred EEEeCC--CCcEEEEec--ccCceeeE--ee-ecCccEEEEEEeCCCCeEEEEcCCCeEEEEECC-CCCcccccccccCC
Q 017194 31 VASSGE--DGCICWFDL--RSKDVQLV--TD-VGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVH-MPASWRPLESYNYN 102 (375)
Q Consensus 31 l~s~~~--d~~i~iw~~--~~~~~~~~--~~-~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~ 102 (375)
++.|+. ++.|.+|++ .+++.... .. .....+..++|+|++++|++++.+ .|.+|++. +++... +.....+
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~-~~~~~~~ 82 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVH-EASHPIG 82 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEE-EEEEECC
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEE-eeEeecC
Confidence 444443 246777765 34543221 11 133468899999999999988877 99999986 554322 2121111
Q ss_pred CcceeEEEEcCCCCe--EEEEe-------------CCCcEEEEeCc-CceeeeeEec---CcccceeEEEEeeCCCcEEE
Q 017194 103 KEEINQIVCNPKSSF--LACAD-------------DGGDVKIIDIR-QHCLYKSLRA---GHSSICSSVQFIPWKPWEVI 163 (375)
Q Consensus 103 ~~~v~~~~~~~~~~~--l~~~~-------------~dg~i~iwd~~-~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~ 163 (375)
+.+..++|+|++++ ++++. .++.+.+|++. +++....+.. .+...+.+++|+|+|+ .++
T Consensus 83 -g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~-~l~ 160 (365)
T 1jof_A 83 -GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET-YLY 160 (365)
T ss_dssp -SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS-EEE
T ss_pred -CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC-EEE
Confidence 23567899999984 44543 68999999997 4555433330 1456789999999998 465
Q ss_pred Eee-cCCeEEEeeCC-CCCcce--EEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEec-CCcEEEEeCC
Q 017194 164 SGG-LDSKLVMWDFS-KGRPNK--IVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKG-DGVVDVINIE 238 (375)
Q Consensus 164 ~~~-~d~~i~~wd~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~ 238 (375)
++. .++.|++||+. +++... .+.... +...+..++|+| +++++++++. ++.|.+|++.
T Consensus 161 ~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~-----------~g~~p~~~~~sp------dg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 161 SADLTANKLWTHRKLASGEVELVGSVDAPD-----------PGDHPRWVAMHP------TGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECSS-----------TTCCEEEEEECT------TSSEEEEEETTTTEEEEEEEC
T ss_pred EEcCCCCEEEEEEECCCCCEEEeeeEecCC-----------CCCCCCEeEECC------CCCEEEEEECCCCeEEEEEEe
Confidence 554 46899999998 665432 222110 134688999999 8998888775 6899999875
Q ss_pred --CcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeee----cCCCc------cEEEEE-EeecCCCC
Q 017194 239 --SELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSV----GGHTA------AASCVA-FSMFGERG 305 (375)
Q Consensus 239 --~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~------~v~~~~-~s~~~~~~ 305 (375)
+++.... .+.+..+ .+|.. .+..++ |+ |||
T Consensus 224 ~~~g~~~~~----------------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~s---pdG 266 (365)
T 1jof_A 224 PATHMPVYT----------------------------------HHSFPLIPPGIPDRDPETGKGLYRADVCALT---FSG 266 (365)
T ss_dssp TTTCCEEEE----------------------------------EEEEESSCTTCCCBCTTTSSBSEEEEEEEEC---TTS
T ss_pred CCCCcEEEc----------------------------------cceEEcCCCCcCCcccccccccccccEEEEC---CCC
Confidence 2221100 0011111 12222 588999 99 999
Q ss_pred cEEEEecCC-C-----eEEEEeCC-CceeeeecchhhhhhhhcccccceeeeeecCC--CCCcEEEeeC-CCeEEEEec
Q 017194 306 KYLISGGND-K-----LVKVWDCS-RFQGVQTSINNDLLIKNINLNKKVNWLCTTPT--ESENLVVCDT-SKVVKVYSI 374 (375)
Q Consensus 306 ~~l~s~~~d-g-----~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~-dg~v~iw~~ 374 (375)
++|++++.+ + .|.+|++. +++.. ........+...+..++|+|. +|++|++++. ++.|.+|++
T Consensus 267 ~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~------~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 267 KYMFASSRANKFELQGYIAGFKLRDCGSIE------KQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp SEEEEEEEESSTTSCCEEEEEEECTTSCEE------EEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred CEEEEECCCCCCCCCCeEEEEEECCCCCEE------EeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence 988876543 2 89999996 44211 000012224455678899985 6889998876 489999986
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.89 E-value=3.4e-21 Score=162.99 Aligned_cols=261 Identities=8% Similarity=0.046 Sum_probs=169.9
Q ss_pred CCceeEEEEecCCCCEEEEeCCCCcEEEEecc-cCceeeEeeec-CccEEEEEEeCCCCe--EEEEc-------------
Q 017194 15 KATATCCIASRDRPGFVASSGEDGCICWFDLR-SKDVQLVTDVG-NGPVTSLCFKSGNED--IIYVS------------- 77 (375)
Q Consensus 15 ~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~-~~~~~~~~~~~-~~~v~~l~~~~~~~~--l~~~~------------- 77 (375)
...+..++|+|+ +++|++++.+ .|.+|++. +++........ .+.+..++|+|+|++ ++++.
T Consensus 39 ~~~~~~~a~spd-g~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 39 DEPISWMTFDHE-RKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TCCCSEEEECTT-SSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCcEEEECCC-CCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 346888999999 8888888877 99999997 77654433211 123556899999995 44543
Q ss_pred CCCeEEEEECCC-CCccccccccc-CCCcceeEEEEcCCCCeEEEEe-CCCcEEEEeCc-Cceee--eeEec-Cccccee
Q 017194 78 SGKEVKSFDVHM-PASWRPLESYN-YNKEEINQIVCNPKSSFLACAD-DGGDVKIIDIR-QHCLY--KSLRA-GHSSICS 150 (375)
Q Consensus 78 ~d~~i~iwd~~~-~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~-~~~~~--~~~~~-~~~~~v~ 150 (375)
.++.+.+|++.. ++....+..+. .+...+.+++|+|+|++++++. .++.|++||+. +++.. ..+.. .|...+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 588999999974 43322233221 1346789999999999888776 46799999998 66543 23331 1356789
Q ss_pred EEEEeeCCCcEEEEee-cCCeEEEeeCC--CCCcce---EEecCCCCC-CCCCCcccCCCceeEEe-ecCCccccCCCCE
Q 017194 151 SVQFIPWKPWEVISGG-LDSKLVMWDFS--KGRPNK---IVNFGLPEN-NGNAGQCYNPAFVHAIA-IPDADMLDKTNKI 222 (375)
Q Consensus 151 ~~~~~~~~~~~l~~~~-~d~~i~~wd~~--~~~~~~---~~~~~~~~~-~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~ 222 (375)
.++|+|+|+ .+++++ .++.|.+|++. +++... .+..- +.. .......-....+..++ |+| ++++
T Consensus 197 ~~~~spdg~-~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~i~~~sp------dG~~ 268 (365)
T 1jof_A 197 WVAMHPTGN-YLYALMEAGNRICEYVIDPATHMPVYTHHSFPLI-PPGIPDRDPETGKGLYRADVCALTF------SGKY 268 (365)
T ss_dssp EEEECTTSS-EEEEEETTTTEEEEEEECTTTCCEEEEEEEEESS-CTTCCCBCTTTSSBSEEEEEEEECT------TSSE
T ss_pred EeEECCCCC-EEEEEECCCCeEEEEEEeCCCCcEEEccceEEcC-CCCcCCcccccccccccccEEEECC------CCCE
Confidence 999999998 455555 57899999875 454322 22211 000 00000000001578899 999 8998
Q ss_pred EEEEecC-C-----cEEEEeCC-CcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEE
Q 017194 223 CVVAKGD-G-----VVDVINIE-SELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASC 295 (375)
Q Consensus 223 l~~~~~d-g-----~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 295 (375)
|++++.+ + .|.+|++. +++.. ........+...+..
T Consensus 269 l~v~~~~~~~~~~~~i~v~~~~~~g~~~-------------------------------------~~~~~~~~~~~~~~~ 311 (365)
T 1jof_A 269 MFASSRANKFELQGYIAGFKLRDCGSIE-------------------------------------KQLFLSPTPTSGGHS 311 (365)
T ss_dssp EEEEEEESSTTSCCEEEEEEECTTSCEE-------------------------------------EEEEEEECSSCCTTC
T ss_pred EEEECCCCCCCCCCeEEEEEECCCCCEE-------------------------------------EeeeeeecCCCCccc
Confidence 8877643 2 89999986 32110 100012223344567
Q ss_pred EEEeecCC---CCcEEEEecCC-CeEEEEeCCCc
Q 017194 296 VAFSMFGE---RGKYLISGGND-KLVKVWDCSRF 325 (375)
Q Consensus 296 ~~~s~~~~---~~~~l~s~~~d-g~i~iwd~~~~ 325 (375)
++|+ | ||++|++++.+ +.|.+|++...
T Consensus 312 ~a~s---p~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 312 NAVS---PCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CCEE---ECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred ceec---CCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 8899 8 89999988864 89999998764
No 162
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.89 E-value=4e-22 Score=170.87 Aligned_cols=290 Identities=12% Similarity=0.049 Sum_probs=186.6
Q ss_pred cCCCCCeeeecCCCc-----eeEEEEecCCCCEEEEeCC---CCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEE
Q 017194 3 DAEAKPRRLRGHKAT-----ATCCIASRDRPGFVASSGE---DGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDII 74 (375)
Q Consensus 3 ~~~~~~~~l~~h~~~-----i~~~~~~~~~~~~l~s~~~---d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~ 74 (375)
.+++.+..+..+... +.+++|+|+ |++|+.... +..|.+||+.+++.......+......+.|+|+|++|+
T Consensus 18 ~~g~~~~~l~~~~~~~~~~~~~~~~~Spd-G~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~ 96 (396)
T 3c5m_A 18 DTQVKVTRLTPTDIICHRNYFYQKCFTQD-GKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFF 96 (396)
T ss_dssp TTCCEEEECSCTTSCEECCCTTSCCBCTT-SCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEE
T ss_pred CCCcceEEEecCCCCccceeeecCcCCCC-CCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEE
Confidence 455556667665444 788899999 787766543 24688889988775444333333233478999999999
Q ss_pred EEcCCCeEEEEECCCCCcccccccccCCCcceeE-------------------EEEcCCCCeEEEE-----eCCCcEEEE
Q 017194 75 YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQ-------------------IVCNPKSSFLACA-----DDGGDVKII 130 (375)
Q Consensus 75 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~dg~i~iw 130 (375)
.++.++.|++||+.+++..... .. +...... +.|+|+++.++.. ..+..|++|
T Consensus 97 ~~~~~~~l~~~d~~~~~~~~~~-~~--~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~ 173 (396)
T 3c5m_A 97 YVKNELNLMKVDLETLEEQVIY-TV--DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKV 173 (396)
T ss_dssp EEETTTEEEEEETTTCCEEEEE-EC--CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEE
T ss_pred EEEcCCcEEEEECCCCCcEEEE-ec--ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEE
Confidence 9999999999999876532222 11 1121111 3567888776654 356689999
Q ss_pred eCcCceeeeeEecCcccceeEEEEee-CCCcEEEEeecC------CeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCC
Q 017194 131 DIRQHCLYKSLRAGHSSICSSVQFIP-WKPWEVISGGLD------SKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPA 203 (375)
Q Consensus 131 d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (375)
|+.+++...... +...+..+.|+| ++. .|+..+.+ ..|.+||+..++.. .+.... ...
T Consensus 174 d~~~g~~~~~~~--~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~-----------~~~ 238 (396)
T 3c5m_A 174 DIETGELEVIHQ--DTAWLGHPIYRPFDDS-TVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHA-----------EGE 238 (396)
T ss_dssp ETTTCCEEEEEE--ESSCEEEEEEETTEEE-EEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCC-----------TTE
T ss_pred ECCCCcEEeecc--CCcccccceECCCCCC-EEEEEecCCCCCCCceEEEEECCCCcee-EeeccC-----------CCc
Confidence 998877655443 667789999999 676 45554433 46888888755432 221110 023
Q ss_pred ceeEEeecCCccccCCCCEEEEEecC-----CcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcc
Q 017194 204 FVHAIAIPDADMLDKTNKICVVAKGD-----GVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGK 278 (375)
Q Consensus 204 ~v~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~ 278 (375)
.+..++|+| +++.|+.++.+ +.|++||+.+++..
T Consensus 239 ~~~~~~~sp------dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~----------------------------------- 277 (396)
T 3c5m_A 239 SCTHEFWIP------DGSAMAYVSYFKGQTDRVIYKANPETLENE----------------------------------- 277 (396)
T ss_dssp EEEEEEECT------TSSCEEEEEEETTTCCEEEEEECTTTCCEE-----------------------------------
T ss_pred cccceEECC------CCCEEEEEecCCCCccceEEEEECCCCCeE-----------------------------------
Confidence 577889999 79887776543 44999999864211
Q ss_pred eeEeeeeecCCCccEEEEEEeecCC-CCcEEEEec----------------CCCeEEEEeCCCceeeeecchhhhhhhhc
Q 017194 279 RLHLDYSVGGHTAAASCVAFSMFGE-RGKYLISGG----------------NDKLVKVWDCSRFQGVQTSINNDLLIKNI 341 (375)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~s~~~~-~~~~l~s~~----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 341 (375)
.+..+.+ .. +.|+ | ||+++++++ .++.|++||+.+++. ..+.
T Consensus 278 ---~l~~~~~----~~-~~~s---~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~----------~~l~ 336 (396)
T 3c5m_A 278 ---EVMVMPP----CS-HLMS---NFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA----------QKLC 336 (396)
T ss_dssp ---EEEECCS----EE-EEEE---CSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC----------CEEE
T ss_pred ---EeeeCCC----CC-CCcc---CCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce----------EEcc
Confidence 1112221 22 7888 7 999888754 347899999988632 1223
Q ss_pred cccc-----------ceeeeeecCCCCCcEEEeeC-CCeEEEEec
Q 017194 342 NLNK-----------KVNWLCTTPTESENLVVCDT-SKVVKVYSI 374 (375)
Q Consensus 342 ~~~~-----------~v~~~~~~~~~~~~l~s~~~-dg~v~iw~~ 374 (375)
.+.. .+..++|+| +|+.|+.++. ++...+|.+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 337 KHSTSWDVLDGDRQITHPHPSFTP-NDDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp ECCCCCCCBTTBSSTTCCCCEECT-TSSEEEEEECTTSSCEEEEE
T ss_pred CCCCccccccccccCCCCCceEcc-CCCeEEEEecCCCCceEEEE
Confidence 3333 256678999 8988877664 565556543
No 163
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.88 E-value=1.3e-20 Score=158.56 Aligned_cols=272 Identities=11% Similarity=0.046 Sum_probs=182.5
Q ss_pred CCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcC----------CCeEEEEECCCCCcccccccccC---C
Q 017194 36 EDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSS----------GKEVKSFDVHMPASWRPLESYNY---N 102 (375)
Q Consensus 36 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~----------d~~i~iwd~~~~~~~~~~~~~~~---~ 102 (375)
.|+.|.+||..+++.+..+..+..+ .++|+|++++++++.. ++.|.+||..+.+....+..... +
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 3679999999999988888776555 8999999999988862 56899999987665544443211 1
Q ss_pred CcceeEEEEcCCCCeEEEEeC--CCcEEEEeCcCceeeee-EecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCC-
Q 017194 103 KEEINQIVCNPKSSFLACADD--GGDVKIIDIRQHCLYKS-LRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK- 178 (375)
Q Consensus 103 ~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~- 178 (375)
......++++|++++|+++.. ++.|.+||+.+++.+.. +. .. ....+.+.|+++..+++.+.||.+.+|++..
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~--~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~ 183 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA--AA-GCWSVIPQPNRPRSFMTICGDGGLLTINLGED 183 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG--GT-TEEEEEECTTSSSEEEEEETTSSEEEEEECTT
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec--CC-CcceeEEcCCCCeeEEEECCCCcEEEEEECCC
Confidence 245678999999999998874 57899999999988877 54 22 2233667888755788899999999999875
Q ss_pred CCcceEEecCCCCCCCCCCcccC-CCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCce
Q 017194 179 GRPNKIVNFGLPENNGNAGQCYN-PAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQ 257 (375)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 257 (375)
++........ ..++ ......+.++| ++..++..+.++.+.++|+..........
T Consensus 184 g~~~~~~~~~---------~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~v~v~d~~~~~~~~~~~---------- 238 (361)
T 2oiz_A 184 GKVASQSRSK---------QMFSVKDDPIFIAPAL------DKDKAHFVSYYGNVYSADFSGDEVKVDGP---------- 238 (361)
T ss_dssp SSEEEEEECC---------CCSCTTTSCBCSCCEE------CSSEEEEEBTTSEEEEEECSSSSCEEEEE----------
T ss_pred CcEeeecccc---------ceEcCCCCceEEEecc------cCCEEEEEeCCCeEEEEEecCCCceeccc----------
Confidence 4433222100 0000 01111223344 57777777888999999987532110000
Q ss_pred eecccccceeeeeeeecCCcceeEeee--eecC--CCccEEEEEEeecCCCCcEEEEecC-----------CCeEEEEeC
Q 017194 258 STSKVNIRDAEMEILDQSGGKRLHLDY--SVGG--HTAAASCVAFSMFGERGKYLISGGN-----------DKLVKVWDC 322 (375)
Q Consensus 258 ~~s~~g~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~v~~~~~s~~~~~~~~l~s~~~-----------dg~i~iwd~ 322 (375)
..... .... .......++|+ |+++.++++.. .+.|.+||+
T Consensus 239 ----------------------~~~~~~~~~~~~~~p~g~~~~a~~---~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~ 293 (361)
T 2oiz_A 239 ----------------------WSLLNDEDKAKNWVPGGYNLVGLH---RASGRMYVFMHPDGKEGTHKFPAAEIWVMDT 293 (361)
T ss_dssp ----------------------EESCCHHHHHTTCEECCSSCEEEE---TTTTEEEEEEESSCCTTCTTCCCSEEEEEET
T ss_pred ----------------------ccccCccccccccccCCeeEEEEe---cCCCeEEEEEccCCCcccccCCCceEEEEEC
Confidence 00000 0000 00111226788 88777666532 358999999
Q ss_pred CCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 323 SRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
.+. +.+..+..+. +..++|+| ||++|++++. +.|.+||.+
T Consensus 294 ~t~---------~~v~~i~~~~--p~~ia~sp-dg~~l~v~n~-~~v~v~D~~ 333 (361)
T 2oiz_A 294 KTK---------QRVARIPGRD--ALSMTIDQ-QRNLMLTLDG-GNVNVYDIS 333 (361)
T ss_dssp TTT---------EEEEEEECTT--CCEEEEET-TTTEEEEECS-SCEEEEECS
T ss_pred CCC---------cEEEEEecCC--eeEEEECC-CCCEEEEeCC-CeEEEEECC
Confidence 998 4445555555 89999999 9999998887 999999963
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.88 E-value=5.8e-21 Score=176.31 Aligned_cols=207 Identities=9% Similarity=0.084 Sum_probs=142.6
Q ss_pred CCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCcc-----EEEEEEeCCCCeEEEEcCC---------C
Q 017194 15 KATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGP-----VTSLCFKSGNEDIIYVSSG---------K 80 (375)
Q Consensus 15 ~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~-----v~~l~~~~~~~~l~~~~~d---------~ 80 (375)
.....++.|+|+ +++++++ |++|++||+.+++....+..|... ...+.|||||++|+.++.+ +
T Consensus 16 ~~~~~~~~w~~d-g~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 16 RLKLYSLRWISD-HEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCCCEEECSS-SEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred cccccccEECCC-CcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 344668999999 7888886 899999999999987777776532 2447899999999998875 5
Q ss_pred eEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccce-----------
Q 017194 81 EVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSIC----------- 149 (375)
Q Consensus 81 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v----------- 149 (375)
.+.+||+.+++.. . +..+...+..++|||||+.||.+. ++.|++||+.+++..+.-..++...+
T Consensus 93 ~~~~~d~~~~~~~-~---l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~e 167 (740)
T 4a5s_A 93 SYDIYDLNKRQLI-T---EERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEE 167 (740)
T ss_dssp EEEEEETTTTEEC-C---SSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHH
T ss_pred EEEEEECCCCcEE-E---cccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccc
Confidence 6779999986532 2 333467899999999999999884 68999999987765432111222222
Q ss_pred ------eEEEEeeCCCcEEEEeecC-C-----------------------------------eEEEeeCCC---CCcceE
Q 017194 150 ------SSVQFIPWKPWEVISGGLD-S-----------------------------------KLVMWDFSK---GRPNKI 184 (375)
Q Consensus 150 ------~~~~~~~~~~~~l~~~~~d-~-----------------------------------~i~~wd~~~---~~~~~~ 184 (375)
..+.|+|||+ .|+.++.| + +|++||+.+ ++.+..
T Consensus 168 e~~~~~~~~~wSpDg~-~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~ 246 (740)
T 4a5s_A 168 EVFSAYSALWWSPNGT-FLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATS 246 (740)
T ss_dssp HTSSSSBCEEECTTSS-EEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCE
T ss_pred hhcCCCcceEECCCCC-EEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceE
Confidence 3589999999 56665432 2 466777776 532121
Q ss_pred EecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEec----CCcEEEEeCCCcc
Q 017194 185 VNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKG----DGVVDVINIESEL 241 (375)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~ 241 (375)
.....+. ....+...+..++|+| |+++++.... +..|.+||+.+++
T Consensus 247 ~~l~~~~-----~~~~~~~~~~~~~wsp------dg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 247 IQITAPA-----SMLIGDHYLCDVTWAT------QERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEECCCH-----HHHTSCEEEEEEEEEE------TTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred EEecCCc-----cCCCCCeEEEEEEEeC------CCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 1111000 0000345688999999 7887665543 2379999998753
No 165
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.88 E-value=2.1e-19 Score=149.65 Aligned_cols=257 Identities=11% Similarity=0.039 Sum_probs=185.5
Q ss_pred CCceeEEEEecCCCCEEEEeCCC------------------------CcEEEEecccCceeeEee-ecCccEEEEEEeCC
Q 017194 15 KATATCCIASRDRPGFVASSGED------------------------GCICWFDLRSKDVQLVTD-VGNGPVTSLCFKSG 69 (375)
Q Consensus 15 ~~~i~~~~~~~~~~~~l~s~~~d------------------------~~i~iw~~~~~~~~~~~~-~~~~~v~~l~~~~~ 69 (375)
-+.+.+++++|+ ++++++...+ +.|.+||..+++.+..+. .+-.....++++|+
T Consensus 23 l~~v~~va~d~~-G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSK-NNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECTT-CCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred cCCceEEEECCC-CCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 467999999999 8888888777 479999999888766554 33457899999999
Q ss_pred CCeEEEEcCCCeEEEEECCCCC-cccccccc------cCCCcceeEEEEcC-CCCeEEEEe-CCCcEEEEeCcCceeeee
Q 017194 70 NEDIIYVSSGKEVKSFDVHMPA-SWRPLESY------NYNKEEINQIVCNP-KSSFLACAD-DGGDVKIIDIRQHCLYKS 140 (375)
Q Consensus 70 ~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~------~~~~~~v~~~~~~~-~~~~l~~~~-~dg~i~iwd~~~~~~~~~ 140 (375)
|+.+++...++.|++|+..... ....+... ..+......++++| ++.++++.+ .++.|++|| .+++.+..
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~ 180 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQ 180 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEE
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEE
Confidence 9988888888999999986431 12212110 22334688999999 787777775 689999999 46666666
Q ss_pred Eec---------CcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeec
Q 017194 141 LRA---------GHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIP 211 (375)
Q Consensus 141 ~~~---------~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 211 (375)
+.. ++-.....++++|++..++++...++.|++||..+++.+..+.... ....+..++++
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~-----------~~~~~~~~~~~ 249 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS-----------FGRNVFAISYI 249 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT-----------TTTCEEEEEEE
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc-----------cCCCcceeeec
Confidence 640 1223488999999944377888889999999999888887775321 23467788888
Q ss_pred CCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCc
Q 017194 212 DADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTA 291 (375)
Q Consensus 212 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (375)
|...+..+++..++...+..|++||..+++... .+....++..
T Consensus 250 pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~-------------------------------------~~~~~~~~~~ 292 (329)
T 3fvz_A 250 PGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIID-------------------------------------VFKPVRKHFD 292 (329)
T ss_dssp TTEEEEEECCCCTTCSCCCCEEEEETTTCCEEE-------------------------------------EECCSSSCCS
T ss_pred CCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEE-------------------------------------EEcCCCCccC
Confidence 733333344444444556689999988753221 1111235566
Q ss_pred cEEEEEEeecCCCCcEEEEecCCCeEEEEeCCC
Q 017194 292 AASCVAFSMFGERGKYLISGGNDKLVKVWDCSR 324 (375)
Q Consensus 292 ~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~ 324 (375)
.+..++++ |+|.++++...++.|++|++..
T Consensus 293 ~p~~ia~~---~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 293 MPHDIVAS---EDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp SEEEEEEC---TTSEEEEEESSSCCEEEEEEEE
T ss_pred CeeEEEEC---CCCCEEEEECCCCEEEEEeCCc
Confidence 78999999 9998899999999999999865
No 166
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.88 E-value=1.6e-20 Score=157.98 Aligned_cols=212 Identities=10% Similarity=0.096 Sum_probs=159.1
Q ss_pred CCCCCeeeecCC-CceeEEEEecCCCCE-EEEeCCCCcEEEEecccCceeeEeeecC------ccEEEEEEeCCCCeEEE
Q 017194 4 AEAKPRRLRGHK-ATATCCIASRDRPGF-VASSGEDGCICWFDLRSKDVQLVTDVGN------GPVTSLCFKSGNEDIIY 75 (375)
Q Consensus 4 ~~~~~~~l~~h~-~~i~~~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~~~~~~~~~~------~~v~~l~~~~~~~~l~~ 75 (375)
+++.++.+..+. ..+..++|+|+ +++ ++++..++.|.+||+.+++....+..+. ..+..++|+|+|+++++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~s~d-g~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 108 (349)
T 1jmx_B 30 SDTVYKSCVMPDKFGPGTAMMAPD-NRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYA 108 (349)
T ss_dssp TTEEEEEEECSSCCSSCEEEECTT-SSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEE
T ss_pred CCcEEEEEecCCCCCCceeEECCC-CCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEE
Confidence 344455565443 25788999999 664 5566778999999999998877776432 33788999999999998
Q ss_pred EcCC------------CeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEec
Q 017194 76 VSSG------------KEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRA 143 (375)
Q Consensus 76 ~~~d------------~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 143 (375)
++.+ +.|.+||+.+++....+..... ...+.+++|+|+++ +++++ +.|.+||+.+++.+..+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~- 183 (349)
T 1jmx_B 109 TVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALP- 183 (349)
T ss_dssp EEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEEC-
T ss_pred EcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-EEEcc--CcEEEEeCCCCceecccc-
Confidence 8865 8999999987654444444433 34688999999999 66654 349999999887766654
Q ss_pred Ccc--------------------------------------------------------------------cceeEEEEe
Q 017194 144 GHS--------------------------------------------------------------------SICSSVQFI 155 (375)
Q Consensus 144 ~~~--------------------------------------------------------------------~~v~~~~~~ 155 (375)
.+. ..+..++|+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 263 (349)
T 1jmx_B 184 LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRS 263 (349)
T ss_dssp STTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEEC
T ss_pred ccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEec
Confidence 221 134566778
Q ss_pred e-CCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEE
Q 017194 156 P-WKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDV 234 (375)
Q Consensus 156 ~-~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 234 (375)
| +++ .++++ ++.|.+||+.+++.+..+..+ ..+..++|+| ++++|++++.++.|.+
T Consensus 264 p~dg~-~l~~~--~~~v~~~d~~~~~~~~~~~~~--------------~~~~~~~~s~------dg~~l~~~~~~~~v~v 320 (349)
T 1jmx_B 264 PKDPN-QIYGV--LNRLAKYDLKQRKLIKAANLD--------------HTYYCVAFDK------KGDKLYLGGTFNDLAV 320 (349)
T ss_dssp SSCTT-EEEEE--ESEEEEEETTTTEEEEEEECS--------------SCCCEEEECS------SSSCEEEESBSSEEEE
T ss_pred CCCCC-EEEEE--cCeEEEEECccCeEEEEEcCC--------------CCccceEECC------CCCEEEEecCCCeEEE
Confidence 9 888 56666 889999999999888777643 4567899999 7888888888999999
Q ss_pred EeCCCcceee
Q 017194 235 INIESELNIS 244 (375)
Q Consensus 235 ~d~~~~~~~~ 244 (375)
||+.+.+...
T Consensus 321 ~d~~~~~~~~ 330 (349)
T 1jmx_B 321 FNPDTLEKVK 330 (349)
T ss_dssp EETTTTEEEE
T ss_pred Eeccccceee
Confidence 9999865443
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.88 E-value=1.2e-20 Score=172.60 Aligned_cols=296 Identities=10% Similarity=0.052 Sum_probs=190.6
Q ss_pred CeeeecCCCceeEEEEecCCCCEEEEe--CCCCcEEEEecccCceeeEeeecCccEE---------EEEEe--CCCCe-E
Q 017194 8 PRRLRGHKATATCCIASRDRPGFVASS--GEDGCICWFDLRSKDVQLVTDVGNGPVT---------SLCFK--SGNED-I 73 (375)
Q Consensus 8 ~~~l~~h~~~i~~~~~~~~~~~~l~s~--~~d~~i~iw~~~~~~~~~~~~~~~~~v~---------~l~~~--~~~~~-l 73 (375)
...+.+|...+..++++++ .-++++. +.++...||....+.....+..+...+. ...|+ |||+. |
T Consensus 16 ~~~~~~~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~l 94 (662)
T 3azo_A 16 AALVASRSGRPACVGAVGD-EVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLL 94 (662)
T ss_dssp HHHHHHTCSCCEEEEEETT-EEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEE
T ss_pred HHHHhhcCCccceeEEcCC-eEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEE
Confidence 3456789999999999987 6667776 6688999999655555666766666665 66666 99998 7
Q ss_pred EEEcC-CCeEEEEECC--C-CCccccccccc--CCCcceeEEEEcCCCCeEEEEeCC----------CcEEEEeCcC---
Q 017194 74 IYVSS-GKEVKSFDVH--M-PASWRPLESYN--YNKEEINQIVCNPKSSFLACADDG----------GDVKIIDIRQ--- 134 (375)
Q Consensus 74 ~~~~~-d~~i~iwd~~--~-~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d----------g~i~iwd~~~--- 134 (375)
+.++. +..|.++++. . +. ...+.... .|...+..++|+|||+.|++++.+ ..|++||+.+
T Consensus 95 a~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 95 VFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp EEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred EEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 76654 4567777765 2 32 23332211 145678899999999999988876 5899999987
Q ss_pred ---ceeeeeEecCcccceeEEEEeeCCCcEEEEeecC--------CeEEEeeCC-CCC--cceEEecCCCCCCCCCCccc
Q 017194 135 ---HCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLD--------SKLVMWDFS-KGR--PNKIVNFGLPENNGNAGQCY 200 (375)
Q Consensus 135 ---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--------~~i~~wd~~-~~~--~~~~~~~~~~~~~~~~~~~~ 200 (375)
++...... .+...+..++|+|||+ .|+.++.+ ..|++||+. +++ ....+...
T Consensus 174 ~~~~~~~~l~~-~~~~~~~~~~~SpDG~-~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~------------ 239 (662)
T 3azo_A 174 ADRSAVRELSD-DAHRFVTGPRLSPDGR-QAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG------------ 239 (662)
T ss_dssp TCGGGSEESSC-SCSSEECCCEECTTSS-EEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE------------
T ss_pred ccCCceeEEEe-cCCCcccCceECCCCC-EEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC------------
Confidence 55443331 2346788899999999 57666644 479999998 462 23333322
Q ss_pred CCCceeEEeecCCccccCCCCEEEEEecCC--cEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcc
Q 017194 201 NPAFVHAIAIPDADMLDKTNKICVVAKGDG--VVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGK 278 (375)
Q Consensus 201 ~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~ 278 (375)
+...+..+.|+| +|+++++++.++ .|.+||+.+++........ .......+
T Consensus 240 ~~~~~~~~~~sp------dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~--~~~~~p~w------------------- 292 (662)
T 3azo_A 240 PEEAIAQAEWAP------DGSLIVATDRTGWWNLHRVDPATGAATQLCRRE--EEFAGPLW------------------- 292 (662)
T ss_dssp TTBCEEEEEECT------TSCEEEEECTTSSCEEEEECTTTCCEEESSCCS--SBSSCCCC-------------------
T ss_pred CCceEcceEECC------CCeEEEEECCCCCeEEEEEECCCCceeeccccc--ccccCccc-------------------
Confidence 246788999999 788888888888 6666666554322111000 00000000
Q ss_pred eeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEE--eCCCceeeeecchhhhhhhhcccccceeee-eecCC
Q 017194 279 RLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW--DCSRFQGVQTSINNDLLIKNINLNKKVNWL-CTTPT 355 (375)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~ 355 (375)
...+..++|+ ++++++++++. +.++|| |...++ +..+..|...+..+ ++.+
T Consensus 293 -----------~~~~~~~~~~---~~~~~~~~~~~-~~~~l~~~d~~~~~----------~~~l~~~~~~~~~~~s~~~- 346 (662)
T 3azo_A 293 -----------TPGMRWFAPL---ANGLIAVVHGK-GAAVLGILDPESGE----------LVDAAGPWTEWAATLTVSG- 346 (662)
T ss_dssp -----------STTCCSEEEC---TTSCEEEEEBS-SSCEEEEEETTTTE----------EEECCSSCCEEEEEEEEET-
T ss_pred -----------cccCceEeEe---CCCEEEEEEEc-CccEEEEEECCCCc----------EEEecCCCCeEEEEEecCC-
Confidence 0114567888 89999999998 999999 555542 23445566666666 4432
Q ss_pred CCCcEEEeeCCCeEEEE
Q 017194 356 ESENLVVCDTSKVVKVY 372 (375)
Q Consensus 356 ~~~~l~s~~~dg~v~iw 372 (375)
+.-++++++.+....+|
T Consensus 347 ~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 347 TRAVGVAASPRTAYEVV 363 (662)
T ss_dssp TEEEEEEEETTEEEEEE
T ss_pred CEEEEEEcCCCCCCEEE
Confidence 22233344555444444
No 168
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=2.6e-21 Score=178.62 Aligned_cols=278 Identities=10% Similarity=0.033 Sum_probs=164.2
Q ss_pred EEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeC---------CCcEEEEeCc
Q 017194 63 SLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADD---------GGDVKIIDIR 133 (375)
Q Consensus 63 ~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------dg~i~iwd~~ 133 (375)
.++|+|++++ +..+.|+.|++||+.+++....+.........+.+++|+|||++|++++. ++.|++||+.
T Consensus 20 ~~~~s~dg~~-~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEY-LHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEE-EEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeE-EEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 6899999964 44556999999999987643333221000114899999999999998876 6899999999
Q ss_pred CceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCC---------Cc
Q 017194 134 QHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNP---------AF 204 (375)
Q Consensus 134 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 204 (375)
+++.+.... ....+..++|+|+|+ .|+.+. ++.|++||+.+++.......+... ....-++ ..
T Consensus 99 ~g~~~~~~~--l~~~~~~~~~SPDG~-~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~----~v~~g~~~~v~~ee~~~~ 170 (719)
T 1z68_A 99 NGEFVRGNE--LPRPIQYLCWSPVGS-KLAYVY-QNNIYLKQRPGDPPFQITFNGREN----KIFNGIPDWVYEEEMLAT 170 (719)
T ss_dssp TTEECCSSC--CCSSBCCEEECSSTT-CEEEEE-TTEEEEESSTTSCCEECCCCCBTT----TEEESSCCHHHHHHTTCS
T ss_pred CCcccccee--cCcccccceECCCCC-EEEEEE-CCeEEEEeCCCCCcEEEecCCCcC----CeEcccccceeeeecccC
Confidence 887632111 224688999999999 577764 789999999888764322111000 0000001 11
Q ss_pred eeEEeecCCccccCCCCEEEEEecC-CcEEEEeCCCcceeecccccCCCCCCceeeccccccee--eeeeeecCCcce--
Q 017194 205 VHAIAIPDADMLDKTNKICVVAKGD-GVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDA--EMEILDQSGGKR-- 279 (375)
Q Consensus 205 v~~~~~~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~--~~~~~~~~~~~~-- 279 (375)
..+++|+| ||+.|++++.| +.+.+|.+..... ...+....+.+...|.... ....++......
T Consensus 171 ~~~~~wSP------DG~~la~~~~d~~~~~~~~~~~~~~------~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~ 238 (719)
T 1z68_A 171 KYALWWSP------NGKFLAYAEFNDTDIPVIAYSYYGD------EQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVG 238 (719)
T ss_dssp SCCEEECT------TSSEEEEEEEECTTSCEEEEEECCS------SSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHC
T ss_pred cccEEECC------CCCEEEEEEECCCCCceEEeeccCC------CCCccceeecCCCCCCCCCeeEEEEEECCCCCccc
Confidence 25899999 89999998765 3333332211000 0001111111111111110 011122221111
Q ss_pred -eEee--eeecCCCccEEEEEEeecCCCCcEEEEecCC----CeEEEEe----CCCceeeeecchhhhhhhh----cccc
Q 017194 280 -LHLD--YSVGGHTAAASCVAFSMFGERGKYLISGGND----KLVKVWD----CSRFQGVQTSINNDLLIKN----INLN 344 (375)
Q Consensus 280 -~~~~--~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~d----g~i~iwd----~~~~~~~~~~~~~~~~~~~----~~~~ 344 (375)
.+.. ..+.+|...+..++|+ ||++++++.... ..|.+|| +.+++ ..... .+|.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~S---pD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~---------~~~~~~~~~~~~~ 306 (719)
T 1z68_A 239 PQEVPVPAMIASSDYYFSWLTWV---TDERVCLQWLKRVQNVSVLSICDFREDWQTWD---------CPKTQEHIEESRT 306 (719)
T ss_dssp CEECCCCHHHHTSCEEEEEEEES---SSSEEEEEEEESSTTEEEEEEEEECSSSSSEE---------CCGGGEEEEECSS
T ss_pred eeEccCCccCCCCcceEEEeEEe---CCCeEEEEEeccccCeEEEEEEcccCCCCCCc---------eEEEEecccccCC
Confidence 0110 2345688889999999 898887774322 3588899 77763 33333 3566
Q ss_pred ccee-----eeeecCCCCCcEEE--eeCCC--eEEEEec
Q 017194 345 KKVN-----WLCTTPTESENLVV--CDTSK--VVKVYSI 374 (375)
Q Consensus 345 ~~v~-----~~~~~~~~~~~l~s--~~~dg--~v~iw~~ 374 (375)
..+. .++|+| ||+.|+. ...+| .|.+|++
T Consensus 307 ~~~~~~~~~~~~~sp-dg~~l~~~~~~~~g~~~l~~~~~ 344 (719)
T 1z68_A 307 GWAGGFFVSTPVFSY-DAISYYKIFSDKDGYKHIHYIKD 344 (719)
T ss_dssp SCSSSSSCCCCEECT-TSSCEEEEEECTTSCEEEEEESS
T ss_pred ceEccccCCccEECC-CCCeEEEEEEccCCceEEEEEEC
Confidence 6666 789999 8886654 44555 4555554
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.87 E-value=1.4e-19 Score=152.41 Aligned_cols=280 Identities=9% Similarity=-0.011 Sum_probs=187.7
Q ss_pred cCCCCCeeeecCCCceeEEEEecCCCCEEEEeC----------CCCcEEEEecccCceeeEeeec------CccEEEEEE
Q 017194 3 DAEAKPRRLRGHKATATCCIASRDRPGFVASSG----------EDGCICWFDLRSKDVQLVTDVG------NGPVTSLCF 66 (375)
Q Consensus 3 ~~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~----------~d~~i~iw~~~~~~~~~~~~~~------~~~v~~l~~ 66 (375)
++++.+.++..+..+ .++|+|+ +++++++. .+++|.+||..+++.+..+... ......+++
T Consensus 39 ~t~~~~~~i~~g~~p--~i~~spd-g~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~ 115 (361)
T 2oiz_A 39 TNGKFLGMVPTAFNG--HVQVSND-GKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQ 115 (361)
T ss_dssp TTCCEEEEEECCEEE--EEEECTT-SSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEE
T ss_pred CCCeEEEEecCCCCC--ceEECCC-CCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEE
Confidence 355666677766666 8999999 88888775 3678999999999988887643 345678999
Q ss_pred eCCCCeEEEEcC--CCeEEEEECCCCCcccc-cccccCCCcceeEEEEcCCC-CeEEEEeCCCcEEEEeCcC-ceeee--
Q 017194 67 KSGNEDIIYVSS--GKEVKSFDVHMPASWRP-LESYNYNKEEINQIVCNPKS-SFLACADDGGDVKIIDIRQ-HCLYK-- 139 (375)
Q Consensus 67 ~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~-~~~~~-- 139 (375)
+|+|++|+++.. ++.|.+||+.+++.... +.. .....+.+.|++ ..+++.+.||.+.+|++.. ++...
T Consensus 116 spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-----~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~ 190 (361)
T 2oiz_A 116 TTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-----AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQS 190 (361)
T ss_dssp CTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-----TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEE
T ss_pred CCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-----CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeec
Confidence 999999998864 57999999998754433 322 122335567765 6778888999999999864 44431
Q ss_pred ----eEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcc--eEEecCCCCCCCCCCcccCCCceeEEeecCC
Q 017194 140 ----SLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPN--KIVNFGLPENNGNAGQCYNPAFVHAIAIPDA 213 (375)
Q Consensus 140 ----~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 213 (375)
.+. ....+ ..+.+.+++. .++..+.++.|.++|+...... ..+...... .....+.+.....++++|
T Consensus 191 ~~~~~~~-~~~~~-~~~~~~~~g~-~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~---~~~~~~~p~g~~~~a~~~- 263 (361)
T 2oiz_A 191 RSKQMFS-VKDDP-IFIAPALDKD-KAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDE---DKAKNWVPGGYNLVGLHR- 263 (361)
T ss_dssp ECCCCSC-TTTSC-BCSCCEECSS-EEEEEBTTSEEEEEECSSSSCEEEEEEESCCHH---HHHTTCEECCSSCEEEET-
T ss_pred cccceEc-CCCCc-eEEEecccCC-EEEEEeCCCeEEEEEecCCCceecccccccCcc---ccccccccCCeeEEEEec-
Confidence 122 22222 2334567776 5666678899999998755422 122211000 000000011122367888
Q ss_pred ccccCCCCEEEEEec-----------CCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEe
Q 017194 214 DMLDKTNKICVVAKG-----------DGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHL 282 (375)
Q Consensus 214 ~~~~~~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~ 282 (375)
+++.++++.. .+.|.+||+.+. +.
T Consensus 264 -----dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~----------------------------------------~~ 298 (361)
T 2oiz_A 264 -----ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK----------------------------------------QR 298 (361)
T ss_dssp -----TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT----------------------------------------EE
T ss_pred -----CCCeEEEEEccCCCcccccCCCceEEEEECCCC----------------------------------------cE
Confidence 7777777653 348999999875 34
Q ss_pred eeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCc--eeeeecchhhhhhhhcccccceeeeeecCCCCC
Q 017194 283 DYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF--QGVQTSINNDLLIKNINLNKKVNWLCTTPTESE 358 (375)
Q Consensus 283 ~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 358 (375)
+.++..+. +.+++|+ |||++|++++. +.|.+||..++ +. +..+..+......++++| +|.
T Consensus 299 v~~i~~~~--p~~ia~s---pdg~~l~v~n~-~~v~v~D~~t~~l~~---------~~~i~~~G~~P~~~~~~p-~G~ 360 (361)
T 2oiz_A 299 VARIPGRD--ALSMTID---QQRNLMLTLDG-GNVNVYDISQPEPKL---------LRTIEGAAEASLQVQFHP-VGG 360 (361)
T ss_dssp EEEEECTT--CCEEEEE---TTTTEEEEECS-SCEEEEECSSSSCEE---------EEEETTSCSSEEEEEECC-CSC
T ss_pred EEEEecCC--eeEEEEC---CCCCEEEEeCC-CeEEEEECCCCccee---------eEEeccCCCCcEEEEecC-CCC
Confidence 44555555 8999999 99999998887 99999999997 43 223345666778889998 764
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.86 E-value=1.1e-18 Score=142.52 Aligned_cols=241 Identities=10% Similarity=0.114 Sum_probs=171.5
Q ss_pred cCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccc---cCCCcceeEEEE-cCCCCeEEEEeC-CCcEEEEe
Q 017194 57 GNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESY---NYNKEEINQIVC-NPKSSFLACADD-GGDVKIID 131 (375)
Q Consensus 57 ~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~v~~~~~-~~~~~~l~~~~~-dg~i~iwd 131 (375)
+-..+.+++++++++.+++...++.|.+||.. ++....+... ..+...+..+++ .++++++++... ++.|.+||
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 44678899999999988887888999999987 3333222211 123356889999 467766665533 78999999
Q ss_pred CcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeec
Q 017194 132 IRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIP 211 (375)
Q Consensus 132 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 211 (375)
.+++.+..+...+...+.++++.|++. ++++...++.|.+||.. ++.+..+.... ....+..++++
T Consensus 107 -~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~-----------~~~~p~~i~~~ 172 (286)
T 1q7f_A 107 -QYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQN-GNVLHKFGCSK-----------HLEFPNGVVVN 172 (286)
T ss_dssp -TTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEEEEECTT-----------TCSSEEEEEEC
T ss_pred -CCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCC-CCEEEEeCCCC-----------ccCCcEEEEEC
Confidence 567776666523445789999999997 77777788999999964 55555554210 22457899999
Q ss_pred CCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeee--cCC
Q 017194 212 DADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSV--GGH 289 (375)
Q Consensus 212 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~ 289 (375)
| +++++++...++.|++||.... .+..+ .++
T Consensus 173 ~------~g~l~v~~~~~~~i~~~~~~g~-----------------------------------------~~~~~~~~g~ 205 (286)
T 1q7f_A 173 D------KQEIFISDNRAHCVKVFNYEGQ-----------------------------------------YLRQIGGEGI 205 (286)
T ss_dssp S------SSEEEEEEGGGTEEEEEETTCC-----------------------------------------EEEEESCTTT
T ss_pred C------CCCEEEEECCCCEEEEEcCCCC-----------------------------------------EEEEEccCCc
Confidence 8 7888877778899999997642 11122 222
Q ss_pred CccEEEEEEeecCCCCcEEEEecCCC-eEEEEeCCCceeeeecchhhhhhhhccc--ccceeeeeecCCCCCcEEEeeCC
Q 017194 290 TAAASCVAFSMFGERGKYLISGGNDK-LVKVWDCSRFQGVQTSINNDLLIKNINL--NKKVNWLCTTPTESENLVVCDTS 366 (375)
Q Consensus 290 ~~~v~~~~~s~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~d 366 (375)
...+..++++ ++|+++++...++ .|.+||.... .+..+..+ ...+.++++.| +|+++++ +.|
T Consensus 206 ~~~p~~i~~d---~~G~l~v~~~~~~~~i~~~~~~g~----------~~~~~~~~~~~~~~~~i~~~~-~g~l~vs-~~~ 270 (286)
T 1q7f_A 206 TNYPIGVGIN---SNGEILIADNHNNFNLTIFTQDGQ----------LISALESKVKHAQCFDVALMD-DGSVVLA-SKD 270 (286)
T ss_dssp SCSEEEEEEC---TTCCEEEEECSSSCEEEEECTTSC----------EEEEEEESSCCSCEEEEEEET-TTEEEEE-ETT
T ss_pred cCCCcEEEEC---CCCCEEEEeCCCCEEEEEECCCCC----------EEEEEcccCCCCcceeEEECC-CCcEEEE-CCC
Confidence 3567899999 8999988888886 9999996542 22222222 23467899999 8886666 679
Q ss_pred CeEEEEec
Q 017194 367 KVVKVYSI 374 (375)
Q Consensus 367 g~v~iw~~ 374 (375)
++|++|++
T Consensus 271 ~~v~v~~~ 278 (286)
T 1q7f_A 271 YRLYIYRY 278 (286)
T ss_dssp TEEEEEEC
T ss_pred CeEEEEEc
Confidence 99999986
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.86 E-value=2.8e-19 Score=163.54 Aligned_cols=217 Identities=12% Similarity=0.044 Sum_probs=145.3
Q ss_pred CCCeeeecCCCcee---------EEEEe--cCCCCE-EEEeC-CCCcEEEEecc--cCceeeEeee-----cCccEEEEE
Q 017194 6 AKPRRLRGHKATAT---------CCIAS--RDRPGF-VASSG-EDGCICWFDLR--SKDVQLVTDV-----GNGPVTSLC 65 (375)
Q Consensus 6 ~~~~~l~~h~~~i~---------~~~~~--~~~~~~-l~s~~-~d~~i~iw~~~--~~~~~~~~~~-----~~~~v~~l~ 65 (375)
...+.+..|...+. ...|+ || ++. |+.++ .+..|.++++. .......+.. |...+..++
T Consensus 58 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPD-g~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~ 136 (662)
T 3azo_A 58 GAEESALPAPWNVRNRVFEYSGFPWAGVPRPA-GGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPV 136 (662)
T ss_dssp SCEEESSCTTCCBCCCGGGTCCCCEEEECCSS-SSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEE
T ss_pred CCcceeCCCCccccccccccCCccceeeeecC-CCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcE
Confidence 34566677766666 66676 88 666 55444 45667777765 2033445554 667889999
Q ss_pred EeCCCCeEEEEcCC----------CeEEEEECCCC-----CcccccccccCCCcceeEEEEcCCCCeEEEEeCC------
Q 017194 66 FKSGNEDIIYVSSG----------KEVKSFDVHMP-----ASWRPLESYNYNKEEINQIVCNPKSSFLACADDG------ 124 (375)
Q Consensus 66 ~~~~~~~l~~~~~d----------~~i~iwd~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------ 124 (375)
|+|||+.|++++.+ ..|++||+.+. .....+. ..+...+..++|+|||++|+.++.+
T Consensus 137 ~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~ 214 (662)
T 3azo_A 137 LLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELS--DDAHRFVTGPRLSPDGRQAVWLAWDHPRMPW 214 (662)
T ss_dssp EETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESS--CSCSSEECCCEECTTSSEEEEEEECTTCCTT
T ss_pred ECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEE--ecCCCcccCceECCCCCEEEEEECCCCCCCC
Confidence 99999999998876 58999999862 1222222 0335678889999999999987754
Q ss_pred --CcEEEEeCc-Cc---eeeeeEecCcccceeEEEEeeCCCcEEEEeecCC--eEEEeeCCCCCcceEEecCCCCCCCCC
Q 017194 125 --GDVKIIDIR-QH---CLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDS--KLVMWDFSKGRPNKIVNFGLPENNGNA 196 (375)
Q Consensus 125 --g~i~iwd~~-~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~ 196 (375)
..|++||+. ++ +...... .+...+..+.|+|+|+ +++++..++ .|.+||+.+++...... .... ..
T Consensus 215 ~~~~i~~~d~~~~g~~~~~~~l~~-~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~-~~~~---~~ 288 (662)
T 3azo_A 215 EGTELKTARVTEDGRFADTRTLLG-GPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCR-REEE---FA 288 (662)
T ss_dssp TCEEEEEEEECTTSCEEEEEEEEE-ETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSC-CSSB---SS
T ss_pred CCcEEEEEEECCCCcccccEEeCC-CCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCceeeccc-cccc---cc
Confidence 379999998 56 4444444 5578899999999999 788888888 67777766665332221 1000 00
Q ss_pred CcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEE--eCCC
Q 017194 197 GQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVI--NIES 239 (375)
Q Consensus 197 ~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~--d~~~ 239 (375)
...+ ...+..++|+| +++++++++. +.+++| |+.+
T Consensus 289 ~p~w-~~~~~~~~~~~------~~~~~~~~~~-~~~~l~~~d~~~ 325 (662)
T 3azo_A 289 GPLW-TPGMRWFAPLA------NGLIAVVHGK-GAAVLGILDPES 325 (662)
T ss_dssp CCCC-STTCCSEEECT------TSCEEEEEBS-SSCEEEEEETTT
T ss_pred Cccc-cccCceEeEeC------CCEEEEEEEc-CccEEEEEECCC
Confidence 0000 01145678887 7899999988 999999 5443
No 172
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.86 E-value=9.6e-18 Score=148.10 Aligned_cols=319 Identities=11% Similarity=0.079 Sum_probs=212.6
Q ss_pred CCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECC--CCCcccccccccCCCcc
Q 017194 28 PGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVH--MPASWRPLESYNYNKEE 105 (375)
Q Consensus 28 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~ 105 (375)
+.++++...+++|.++|..+++.+..+.. ...+..+.|+|+|+++++++.++.|.+||+. +.+....+.. ...
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~----G~~ 241 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI----GSE 241 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC----CSE
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec----CCC
Confidence 46777888899999999999999888874 4456799999999999999999999999995 5444333332 234
Q ss_pred eeEEEEc----CCCCeEEEEe-CCCcEEEEeCcCceeeeeEecC---------c-ccceeEEEEeeCCCcEEEEeecCCe
Q 017194 106 INQIVCN----PKSSFLACAD-DGGDVKIIDIRQHCLYKSLRAG---------H-SSICSSVQFIPWKPWEVISGGLDSK 170 (375)
Q Consensus 106 v~~~~~~----~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~---------~-~~~v~~~~~~~~~~~~l~~~~~d~~ 170 (375)
...++|+ |||+++++++ .++.|.++|..+.+.+..+... | ...+..+..+++++.+++....+|.
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 6789999 6999988776 4589999999999888877521 1 1257788889988756667777899
Q ss_pred EEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe-cCCcEEEEeCCCcceeecccc-
Q 017194 171 LVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK-GDGVVDVINIESELNISRSKS- 248 (375)
Q Consensus 171 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~- 248 (375)
|.++|....+.+...... .......+.|+| ++++++++. .++.|.++|+.+++.......
T Consensus 322 v~~vd~~~~~~~~v~~i~------------~~~~~~d~~~~p------dgr~~~va~~~sn~V~ViD~~t~kl~~~i~vg 383 (567)
T 1qks_A 322 ILLVDYTDLNNLKTTEIS------------AERFLHDGGLDG------SHRYFITAANARNKLVVIDTKEGKLVAIEDTG 383 (567)
T ss_dssp EEEEETTCSSEEEEEEEE------------CCSSEEEEEECT------TSCEEEEEEGGGTEEEEEETTTTEEEEEEECS
T ss_pred EEEEecCCCccceeeeee------------ccccccCceECC------CCCEEEEEeCCCCeEEEEECCCCcEEEEEecc
Confidence 999999876544333322 235677889998 799887766 678999999999876554432
Q ss_pred cCCCCC-Ccee-ecccccceeeee--------eeecCCc----ceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecC-
Q 017194 249 TTKPLK-GSQS-TSKVNIRDAEME--------ILDQSGG----KRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGN- 313 (375)
Q Consensus 249 ~~~~~~-~~~~-~s~~g~~~~~~~--------~~~~~~~----~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~- 313 (375)
...+.. .... +.|++..+.... .++.... ..++.+.++......-..+..+ |++++|.+...
T Consensus 384 g~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~---p~~~~l~v~~~~ 460 (567)
T 1qks_A 384 GQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTH---PNSQYLYVDATL 460 (567)
T ss_dssp SSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECC---TTCSEEEEECTT
T ss_pred CcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeC---CCCCeEEEecCC
Confidence 111111 2222 567644443211 1111110 1134445554433333445677 99998887653
Q ss_pred ------CCeEEEEeCCCc-----eee-eecchhhhhhhhcccccceeeeeecCCCCCcEEEee-----CCCeEEEEec
Q 017194 314 ------DKLVKVWDCSRF-----QGV-QTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCD-----TSKVVKVYSI 374 (375)
Q Consensus 314 ------dg~i~iwd~~~~-----~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-----~dg~v~iw~~ 374 (375)
.+.|.++|+.+. ... ......+ ...+..-...+..+.|++ +|+.+..+. .++.|.|+|.
T Consensus 461 ~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~G~~~~~s~~~~~~~~~~i~v~D~ 536 (567)
T 1qks_A 461 NPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAE-WAGITEGQPRVVQGEFNK-DGTEVWFSVWNGKDQESALVVVDD 536 (567)
T ss_dssp CSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHH-HHTCCSSCCEEEEEEECT-TSSEEEEEEECCTTSCCEEEEEET
T ss_pred CCCcccCceEEEEECCcccccccCCCcEEecccc-ccccCCCCcceEeeeECC-CCCEEEEEeecCCCCCCcEEEEEC
Confidence 458999999876 110 0000000 001112245788999999 888766652 3789999885
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.86 E-value=3.2e-18 Score=139.82 Aligned_cols=245 Identities=10% Similarity=0.109 Sum_probs=173.5
Q ss_pred cCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeee------cCccEEEEEEe-CCCCeEEEEcC-CCeEEE
Q 017194 13 GHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDV------GNGPVTSLCFK-SGNEDIIYVSS-GKEVKS 84 (375)
Q Consensus 13 ~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~------~~~~v~~l~~~-~~~~~l~~~~~-d~~i~i 84 (375)
+|-..+.+++++++ ++++++...++.|.+||.. ++.+..+.. +...+..+++. ++++.+++... ++.|.+
T Consensus 27 g~~~~p~~v~~~~~-g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQ-NDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECTT-CCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECCC-CCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 45567899999998 7888888888999999987 555555532 33578899995 67766655533 789999
Q ss_pred EECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEec-CcccceeEEEEeeCCCcEEE
Q 017194 85 FDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRA-GHSSICSSVQFIPWKPWEVI 163 (375)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~ 163 (375)
||. +++....+.. .+...+..++++++++++++...++.|.+||.. ++.+..+.. .+...+..++++|++. +++
T Consensus 105 ~d~-~g~~~~~~~~--~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v 179 (286)
T 1q7f_A 105 YNQ-YGQFVRKFGA--TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQE-IFI 179 (286)
T ss_dssp ECT-TSCEEEEECT--TTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSE-EEE
T ss_pred ECC-CCcEEEEecC--ccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCC-EEE
Confidence 994 3443332221 223568899999999888777778999999964 555555541 2345689999999987 777
Q ss_pred EeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCC-cEEEEeCCCcce
Q 017194 164 SGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDG-VVDVINIESELN 242 (375)
Q Consensus 164 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~ 242 (375)
+...++.|++||.. ++.+..+... . ....+..+++++ +++++++...++ .|.+||.... .
T Consensus 180 ~~~~~~~i~~~~~~-g~~~~~~~~~-----g------~~~~p~~i~~d~------~G~l~v~~~~~~~~i~~~~~~g~-~ 240 (286)
T 1q7f_A 180 SDNRAHCVKVFNYE-GQYLRQIGGE-----G------ITNYPIGVGINS------NGEILIADNHNNFNLTIFTQDGQ-L 240 (286)
T ss_dssp EEGGGTEEEEEETT-CCEEEEESCT-----T------TSCSEEEEEECT------TCCEEEEECSSSCEEEEECTTSC-E
T ss_pred EECCCCEEEEEcCC-CCEEEEEccC-----C------ccCCCcEEEECC------CCCEEEEeCCCCEEEEEECCCCC-E
Confidence 77789999999974 5555544311 0 124678999988 788888887776 9999996531 1
Q ss_pred eecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeC
Q 017194 243 ISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDC 322 (375)
Q Consensus 243 ~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~ 322 (375)
. ..+ ........+.+++++ |+|+++++ +.|+.|++|++
T Consensus 241 ~-------------------------------------~~~-~~~~~~~~~~~i~~~---~~g~l~vs-~~~~~v~v~~~ 278 (286)
T 1q7f_A 241 I-------------------------------------SAL-ESKVKHAQCFDVALM---DDGSVVLA-SKDYRLYIYRY 278 (286)
T ss_dssp E-------------------------------------EEE-EESSCCSCEEEEEEE---TTTEEEEE-ETTTEEEEEEC
T ss_pred E-------------------------------------EEE-cccCCCCcceeEEEC---CCCcEEEE-CCCCeEEEEEc
Confidence 0 111 111222347889999 89987777 56899999998
Q ss_pred CCc
Q 017194 323 SRF 325 (375)
Q Consensus 323 ~~~ 325 (375)
...
T Consensus 279 ~~~ 281 (286)
T 1q7f_A 279 VQL 281 (286)
T ss_dssp SCC
T ss_pred ccc
Confidence 764
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.85 E-value=7.5e-19 Score=146.86 Aligned_cols=276 Identities=10% Similarity=0.067 Sum_probs=186.5
Q ss_pred CceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccc
Q 017194 16 ATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRP 95 (375)
Q Consensus 16 ~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 95 (375)
..|.++.|+++ ...++..+.++.++.| .++....+..+...+.+++|+++++.++++..++.|.+||..+++....
T Consensus 6 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~ 81 (333)
T 2dg1_A 6 QDLPTLFYSGK-SNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRP 81 (333)
T ss_dssp CCCCBCCSCGG-GGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEE
T ss_pred cccceeeecCC-ccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEE
Confidence 45778889998 6677777788899999 3555666777777889999999999777888889999999986543222
Q ss_pred cccccCCCcceeEEEEcCCCCeEEEEeCC----CcEEEEeCcCceeeeeEe-cCcccceeEEEEeeCCCcEEEEeec---
Q 017194 96 LESYNYNKEEINQIVCNPKSSFLACADDG----GDVKIIDIRQHCLYKSLR-AGHSSICSSVQFIPWKPWEVISGGL--- 167 (375)
Q Consensus 96 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~--- 167 (375)
. ..+...+.+++++|+++++++...+ +.|.+||.++++....+. ..+...+.+++++|++. ++++...
T Consensus 82 ~---~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~ 157 (333)
T 2dg1_A 82 F---VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYS 157 (333)
T ss_dssp E---ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC-EEEEECCCBT
T ss_pred e---eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC-EEEEeccccc
Confidence 1 1235679999999999887777666 689999988776543332 02345789999999997 5665543
Q ss_pred ---CCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEE-EecCCcEEEEeCCCc-ce
Q 017194 168 ---DSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVV-AKGDGVVDVINIESE-LN 242 (375)
Q Consensus 168 ---d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~-~~ 242 (375)
.+.|..+|...++...... . ...+..++++| +++.+++ .+.++.|.+||+.+. ..
T Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~-~-------------~~~~~~i~~~~------dg~~l~v~~~~~~~i~~~d~~~~g~~ 217 (333)
T 2dg1_A 158 TNPLGGVYYVSPDFRTVTPIIQ-N-------------ISVANGIALST------DEKVLWVTETTANRLHRIALEDDGVT 217 (333)
T ss_dssp TBCCEEEEEECTTSCCEEEEEE-E-------------ESSEEEEEECT------TSSEEEEEEGGGTEEEEEEECTTSSS
T ss_pred cCCCceEEEEeCCCCEEEEeec-C-------------CCcccceEECC------CCCEEEEEeCCCCeEEEEEecCCCcC
Confidence 3567777765544332222 1 23578899998 7876554 456789999998641 11
Q ss_pred eecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeC
Q 017194 243 ISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDC 322 (375)
Q Consensus 243 ~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~ 322 (375)
.... .......+.++ ..+..++++ ++|+++++...++.|.+||.
T Consensus 218 ~~~~--------------------------------~~~~~~~~~~~-~~~~~i~~d---~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 218 IQPF--------------------------------GATIPYYFTGH-EGPDSCCID---SDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp EEEE--------------------------------EEEEEEECCSS-SEEEEEEEB---TTCCEEEEEETTTEEEEECT
T ss_pred cccc--------------------------------cceEEEecCCC-CCCCceEEC---CCCCEEEEEcCCCEEEEECC
Confidence 0000 00111122232 467789999 89998888877899999998
Q ss_pred CCceeeeecchhhhhhhhc------ccccceeeeeecCCCCCcEEEeeCC
Q 017194 323 SRFQGVQTSINNDLLIKNI------NLNKKVNWLCTTPTESENLVVCDTS 366 (375)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~s~~~d 366 (375)
. ++.. ..+. +|...+.+++|+| +++.|+.++.+
T Consensus 262 ~-g~~~---------~~~~~~~~~~g~~~~~~~~~~~~-dg~~L~v~~~~ 300 (333)
T 2dg1_A 262 R-GYPI---------GQILIPGRDEGHMLRSTHPQFIP-GTNQLIICSND 300 (333)
T ss_dssp T-SCEE---------EEEECTTGGGTCSCBCCEEEECT-TSCEEEEEEEC
T ss_pred C-CCEE---------EEEEcCCCccccccCcceEEECC-CCCEEEEEeCc
Confidence 5 3221 1121 2223688999987 87677665544
No 175
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.85 E-value=6.2e-19 Score=146.84 Aligned_cols=253 Identities=11% Similarity=0.096 Sum_probs=175.3
Q ss_pred CccEEEEEEeCCCCeEEEEcCC------------------------CeEEEEECCCCCcccccccccCCCcceeEEEEcC
Q 017194 58 NGPVTSLCFKSGNEDIIYVSSG------------------------KEVKSFDVHMPASWRPLESYNYNKEEINQIVCNP 113 (375)
Q Consensus 58 ~~~v~~l~~~~~~~~l~~~~~d------------------------~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 113 (375)
-..+.+++++|+|+.+++...+ +.|.+||..+++...... ..+-.....++++|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~--~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG--KNLFYLPHGLSIDT 100 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC--TTTCSSEEEEEECT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC--CCccCCceEEEECC
Confidence 3578999999999988887766 479999998776533222 12335688999999
Q ss_pred CCCeEEEEeCCCcEEEEeCcCce-eeeeEe--------cCcccceeEEEEee-CCCcEEEEee-cCCeEEEeeCCCCCcc
Q 017194 114 KSSFLACADDGGDVKIIDIRQHC-LYKSLR--------AGHSSICSSVQFIP-WKPWEVISGG-LDSKLVMWDFSKGRPN 182 (375)
Q Consensus 114 ~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~--------~~~~~~v~~~~~~~-~~~~~l~~~~-~d~~i~~wd~~~~~~~ 182 (375)
+++++++...++.|++||..... .+..+. ..+......++++| ++. ++++.+ .++.|++|| .+++.+
T Consensus 101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~~~~~I~~~~-~~g~~~ 178 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDGYCNSRIVQFS-PSGKFV 178 (329)
T ss_dssp TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEECSSCCEEEEEC-TTSCEE
T ss_pred CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeCCCCCeEEEEc-CCCCEE
Confidence 99988888888999999986442 455552 13444689999999 665 677775 689999999 557666
Q ss_pred eEEecCCCCCCCCCCcccCCCceeEEeecCCccccCC-CCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecc
Q 017194 183 KIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKT-NKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSK 261 (375)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~ 261 (375)
..+..... ..............++++| + +.++++...++.|++||..+++....
T Consensus 179 ~~~~~~g~---~~~~~~~~~~~p~gia~d~------~~g~l~v~d~~~~~I~~~~~~~G~~~~~---------------- 233 (329)
T 3fvz_A 179 TQWGEESS---GSSPRPGQFSVPHSLALVP------HLDQLCVADRENGRIQCFKTDTKEFVRE---------------- 233 (329)
T ss_dssp EEECEECC---SSSCCTTEESCEEEEEEET------TTTEEEEEETTTTEEEEEETTTCCEEEE----------------
T ss_pred EEeccCCC---CCCCCCcccCCCcEEEEEC------CCCEEEEEECCCCEEEEEECCCCcEEEE----------------
Confidence 65532100 0000000113478999998 6 77777777889999999985432211
Q ss_pred cccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCC------CCcEEEEecCCCeEEEEeCCCceeeeecchhh
Q 017194 262 VNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGE------RGKYLISGGNDKLVKVWDCSRFQGVQTSINND 335 (375)
Q Consensus 262 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 335 (375)
.....+...+..++++ | +|+..++...+..|++|+..+++.
T Consensus 234 ----------------------~~~~~~~~~~~~~~~~---pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~-------- 280 (329)
T 3fvz_A 234 ----------------------IKHASFGRNVFAISYI---PGFLFAVNGKPYFGDQEPVQGFVMNFSSGEI-------- 280 (329)
T ss_dssp ----------------------ECCTTTTTCEEEEEEE---TTEEEEEECCCCTTCSCCCCEEEEETTTCCE--------
T ss_pred ----------------------EeccccCCCcceeeec---CCEEEEeCCCEEeccCCCcEEEEEEcCCCeE--------
Confidence 1123445667888888 7 333333344556899999998843
Q ss_pred hhhhh---cccccceeeeeecCCCCCcEEEeeCCCeEEEEec
Q 017194 336 LLIKN---INLNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 336 ~~~~~---~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
+..+ .++...+..++++| +|.++++...+++|++|++
T Consensus 281 -~~~~~~~~~~~~~p~~ia~~~-dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 281 -IDVFKPVRKHFDMPHDIVASE-DGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp -EEEECCSSSCCSSEEEEEECT-TSEEEEEESSSCCEEEEEE
T ss_pred -EEEEcCCCCccCCeeEEEECC-CCCEEEEECCCCEEEEEeC
Confidence 3332 35667789999999 8888888888999999986
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.85 E-value=2.9e-19 Score=152.65 Aligned_cols=259 Identities=9% Similarity=0.063 Sum_probs=173.2
Q ss_pred EEEecccCceeeEeeecCccEEE-----EEEeCCCCeEEEEcC-CC--eEEEEECCCCCcccccccccCCCcceeEEEEc
Q 017194 41 CWFDLRSKDVQLVTDVGNGPVTS-----LCFKSGNEDIIYVSS-GK--EVKSFDVHMPASWRPLESYNYNKEEINQIVCN 112 (375)
Q Consensus 41 ~iw~~~~~~~~~~~~~~~~~v~~-----l~~~~~~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 112 (375)
..++..++..+..+..|...... .+|+|||++|+.++. ++ .|.+||+.+++..... ..+...+..+.|+
T Consensus 13 ~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt---~~~~~~~~~~~~s 89 (388)
T 3pe7_A 13 TYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLT---EGRGDNTFGGFLS 89 (388)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECC---CSSCBCSSSCEEC
T ss_pred EEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEee---eCCCCCccceEEc
Confidence 34577778888888777766665 889999999999887 56 5888898876543322 2334455577899
Q ss_pred CCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEE--EeeCCCcEEEEe----------------------ecC
Q 017194 113 PKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQ--FIPWKPWEVISG----------------------GLD 168 (375)
Q Consensus 113 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~l~~~----------------------~~d 168 (375)
||++.|+.++.++.|++||+.+++....+. .+...+.... ++|++. +++.. ..+
T Consensus 90 pdg~~l~~~~~~~~l~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~dg~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (388)
T 3pe7_A 90 PDDDALFYVKDGRNLMRVDLATLEENVVYQ-VPAEWVGYGTWVANSDCT-KLVGIEIRREDWVPLTDWKKFHEFYFTKPC 167 (388)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEE-CCTTEEEEEEEEECTTSS-EEEEEEEEGGGCCCCCSHHHHHHHGGGCCC
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcceeeee-chhhcccccceeECCCCC-eeccccccCcccccccccchhhhhhccCCc
Confidence 999999999999999999999988776666 5555554444 478887 45532 244
Q ss_pred CeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecC------CcEEEEeCCCcce
Q 017194 169 SKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGD------GVVDVINIESELN 242 (375)
Q Consensus 169 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~ 242 (375)
..|.+||+.+++...... +...+..++|+|. +++.|+....+ ..|.++|..+...
T Consensus 168 ~~l~~~d~~~g~~~~l~~--------------~~~~~~~~~~sp~-----dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~ 228 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQ--------------ENQWLGHPIYRPY-----DDSTVAFCHEGPHDLVDARMWLINEDGTNM 228 (388)
T ss_dssp EEEEEEETTTCCEEEEEE--------------ESSCEEEEEEETT-----EEEEEEEEECSCTTTSSCSEEEEETTSCCC
T ss_pred ceEEEEECCCCceEEeec--------------CCccccccEECCC-----CCCEEEEEEecCCCCCcceEEEEeCCCCce
Confidence 789999999886544443 2356889999882 47777766653 3777888765311
Q ss_pred eecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCC--ccEEEEEEeecCCCCcEEEEecC-----CC
Q 017194 243 ISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHT--AAASCVAFSMFGERGKYLISGGN-----DK 315 (375)
Q Consensus 243 ~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~~~~l~s~~~-----dg 315 (375)
..+..+. ..+..++|+ |||+.|+..+. +.
T Consensus 229 -----------------------------------------~~l~~~~~~~~~~~~~~s---pdg~~l~~~~~~~~~~~~ 264 (388)
T 3pe7_A 229 -----------------------------------------RKVKTHAEGESCTHEFWV---PDGSALVYVSYLKGSPDR 264 (388)
T ss_dssp -----------------------------------------EESCCCCTTEEEEEEEEC---TTSSCEEEEEEETTCCCE
T ss_pred -----------------------------------------EEeeeCCCCcccccceEC---CCCCEEEEEecCCCCCcc
Confidence 1222222 357788999 99997765443 22
Q ss_pred eEEEEeCCCceeeeecchhhhhhhhccccc---ceeeeeecCCCCCcEEEe---------eCCCeEEEEecC
Q 017194 316 LVKVWDCSRFQGVQTSINNDLLIKNINLNK---KVNWLCTTPTESENLVVC---------DTSKVVKVYSIS 375 (375)
Q Consensus 316 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~s~---------~~dg~v~iw~~~ 375 (375)
.|++||+.+++.. .+....++.. .....+|+| ||+.|+.. ..+..|++|+++
T Consensus 265 ~l~~~d~~~g~~~-------~l~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 328 (388)
T 3pe7_A 265 FIYSADPETLENR-------QLTSMPACSHLMSNYDGSLMVG-DGSDAPVDVQDDSGYKIENDPFLYVFNMK 328 (388)
T ss_dssp EEEEECTTTCCEE-------EEEEECCEEEEEECTTSSEEEE-EECCC------------CCCCEEEEEETT
T ss_pred eEEEEecCCCceE-------EEEcCCCceeeeecCCCCeEcc-CCCcceeEeeeccccccCCCCEEEEEecc
Confidence 4999999987532 1111122111 122347888 88888754 456789999864
No 177
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.85 E-value=2.4e-19 Score=165.61 Aligned_cols=288 Identities=12% Similarity=0.039 Sum_probs=175.5
Q ss_pred cEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCccccccccc--CCCcceeEEEEcCCCCeEEEEeCC---------CcEE
Q 017194 60 PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYN--YNKEEINQIVCNPKSSFLACADDG---------GDVK 128 (375)
Q Consensus 60 ~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d---------g~i~ 128 (375)
...++.|+|++++++++ |+.|++||+.+++....+.... ........+.|+|||++|+.++.+ +.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 45689999999888876 8999999999886543333221 111123458999999999998875 5677
Q ss_pred EEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCC------
Q 017194 129 IIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNP------ 202 (375)
Q Consensus 129 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 202 (375)
+||+.+++... +. .+...+...+|+|||+ .|+.+ .++.|++||+.+++.......+.+. .....++
T Consensus 96 ~~d~~~~~~~~-l~-~~~~~~~~~~~SPdG~-~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~----~~~~g~~~~v~~e 167 (740)
T 4a5s_A 96 IYDLNKRQLIT-EE-RIPNNTQWVTWSPVGH-KLAYV-WNNDIYVKIEPNLPSYRITWTGKED----IIYNGITDWVYEE 167 (740)
T ss_dssp EEETTTTEECC-SS-CCCTTEEEEEECSSTT-CEEEE-ETTEEEEESSTTSCCEECCSCCBTT----TEEESBCCHHHHH
T ss_pred EEECCCCcEEE-cc-cCCCcceeeEECCCCC-EEEEE-ECCeEEEEECCCCceEEEcCCCCcc----ceecCcccccccc
Confidence 99999987654 55 5778899999999999 57666 4789999999887644321111000 0000001
Q ss_pred ---CceeEEeecCCccccCCCCEEEEEecCC-cEEEEeCCCcceeecccccCCCCCCceeecccccceee--eeeeecCC
Q 017194 203 ---AFVHAIAIPDADMLDKTNKICVVAKGDG-VVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAE--MEILDQSG 276 (375)
Q Consensus 203 ---~~v~~~~~~~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~--~~~~~~~~ 276 (375)
.....+.|+| ||+.|+.++.|. .+.+|++....... ...+....+.+.+.|..... ...++...
T Consensus 168 e~~~~~~~~~wSp------Dg~~la~~~~d~~~v~~~~~~~~~~~~----~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~ 237 (740)
T 4a5s_A 168 EVFSAYSALWWSP------NGTFLAYAQFNDTEVPLIEYSFYSDES----LQYPKTVRVPYPKAGAVNPTVKFFVVNTDS 237 (740)
T ss_dssp HTSSSSBCEEECT------TSSEEEEEEEECTTCCEEEEEECCSTT----CSSCEEEEEECCBTTSCCCEEEEEEEETTS
T ss_pred hhcCCCcceEECC------CCCEEEEEEEcccCCceEEEEeecCCC----CCCCcceeecCCCCcCcCCeeEEEEEECCC
Confidence 1224588999 899999887554 48888764211100 11122233444455543222 23344333
Q ss_pred ---c---ceeEeee--eecCCCccEEEEEEeecCCCCcEEEEe----cCCCeEEEEeCCCceeeeecchhhhhhhh--cc
Q 017194 277 ---G---KRLHLDY--SVGGHTAAASCVAFSMFGERGKYLISG----GNDKLVKVWDCSRFQGVQTSINNDLLIKN--IN 342 (375)
Q Consensus 277 ---~---~~~~~~~--~~~~~~~~v~~~~~s~~~~~~~~l~s~----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~ 342 (375)
. ...++.. .+.+|...+..++|+ |||++++.. +.+..|++||+.+++..... ..+..+ ..
T Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ws---pdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~---~~~~~l~~~~ 311 (740)
T 4a5s_A 238 LSSVTNATSIQITAPASMLIGDHYLCDVTWA---TQERISLQWLRRIQNYSVMDICDYDESSGRWNC---LVARQHIEMS 311 (740)
T ss_dssp CCSSSCCCEEEECCCHHHHTSCEEEEEEEEE---ETTEEEEEEEESSTTEEEEEEEEEETTTTEEEE---CGGGCEEEEC
T ss_pred CCCCCcceEEEecCCccCCCCCeEEEEEEEe---CCCeEEEEEeCCCCCEEEEEEEECCCCccccce---eEEEEeeecc
Confidence 2 1111111 112477889999999 899966654 33457999999987300000 111222 34
Q ss_pred ccccee-----eeeecCCCCCcEE-Eee-CCC--eEEEEec
Q 017194 343 LNKKVN-----WLCTTPTESENLV-VCD-TSK--VVKVYSI 374 (375)
Q Consensus 343 ~~~~v~-----~~~~~~~~~~~l~-s~~-~dg--~v~iw~~ 374 (375)
|...+. ..+|+| ||+.|+ ..+ .+| .|++|++
T Consensus 312 ~~~~v~~~~~~~p~fsp-DG~~l~~~~s~~~G~~~l~~~~~ 351 (740)
T 4a5s_A 312 TTGWVGRFRPSEPHFTL-DGNSFYKIISNEEGYRHICYFQI 351 (740)
T ss_dssp SSSCSSSSSCCCCEECT-TSSEEEEEEECTTSCEEEEEEET
T ss_pred CCceEccCcCCCceEcC-CCCEEEEEEEcCCCceEEEEEEC
Confidence 555444 678999 998877 555 344 5777765
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.84 E-value=4.1e-18 Score=139.85 Aligned_cols=249 Identities=12% Similarity=0.013 Sum_probs=176.3
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCC-EEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeE
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPG-FVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEV 82 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i 82 (375)
.+..+..+..+.....+++|+|+ ++ +++++..++.|..|+..++ ...+..+...+.+++++++|+.+++...++.|
T Consensus 16 ~~~~~~~l~~~~~~~eg~~~d~~-g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i 92 (296)
T 3e5z_A 16 AGAEARRLADGFTWTEGPVYVPA-RSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRL 92 (296)
T ss_dssp TTCCCEEEECCCSSEEEEEEEGG-GTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEE
T ss_pred CCCcEEEEecCCccccCCeEeCC-CCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeE
Confidence 44566777777788899999999 66 7888888999999999877 56666677889999999999987777767899
Q ss_pred EEEECCCCCcccccccccC-CCcceeEEEEcCCCCeEEEE----e-------------CCCcEEEEeCcCceeeeeEecC
Q 017194 83 KSFDVHMPASWRPLESYNY-NKEEINQIVCNPKSSFLACA----D-------------DGGDVKIIDIRQHCLYKSLRAG 144 (375)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~----~-------------~dg~i~iwd~~~~~~~~~~~~~ 144 (375)
.+||..+++.......... ....+..++++|+|+++++. . ..+.|..++.. ++. ..+. .
T Consensus 93 ~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~-~ 169 (296)
T 3e5z_A 93 ERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPI-R 169 (296)
T ss_dssp EEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEE-C
T ss_pred EEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEee-c
Confidence 9999977654322222111 12356789999999888863 2 13456666654 443 3444 4
Q ss_pred cccceeEEEEeeCCCcEEEEeecCCeEEEeeCC-CCCc---ceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCC
Q 017194 145 HSSICSSVQFIPWKPWEVISGGLDSKLVMWDFS-KGRP---NKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTN 220 (375)
Q Consensus 145 ~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 220 (375)
+......++|+|+++ .+++.+.++.|.+||+. +++. ...+ .. ....+..+++++ +|
T Consensus 170 ~~~~~~gi~~s~dg~-~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~------------~~~~p~~i~~d~------~G 229 (296)
T 3e5z_A 170 DRVKPNGLAFLPSGN-LLVSDTGDNATHRYCLNARGETEYQGVHF-TV------------EPGKTDGLRVDA------GG 229 (296)
T ss_dssp CCSSEEEEEECTTSC-EEEEETTTTEEEEEEECSSSCEEEEEEEE-CC------------SSSCCCSEEEBT------TS
T ss_pred CCCCCccEEECCCCC-EEEEeCCCCeEEEEEECCCCcCcCCCeEe-eC------------CCCCCCeEEECC------CC
Confidence 666789999999998 56777788999999997 4443 1222 11 234556788888 78
Q ss_pred CEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEee
Q 017194 221 KICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSM 300 (375)
Q Consensus 221 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 300 (375)
+++++. ++.|.+||... +.+..+..+.. +.+++|..
T Consensus 230 ~l~v~~--~~~v~~~~~~g-----------------------------------------~~~~~~~~~~~-~~~~~f~~ 265 (296)
T 3e5z_A 230 LIWASA--GDGVHVLTPDG-----------------------------------------DELGRVLTPQT-TSNLCFGG 265 (296)
T ss_dssp CEEEEE--TTEEEEECTTS-----------------------------------------CEEEEEECSSC-CCEEEEES
T ss_pred CEEEEc--CCeEEEECCCC-----------------------------------------CEEEEEECCCC-ceeEEEEC
Confidence 766655 78999999873 22234444555 88888941
Q ss_pred cCCCCcEEEEecCCCeEEEEeCCCc
Q 017194 301 FGERGKYLISGGNDKLVKVWDCSRF 325 (375)
Q Consensus 301 ~~~~~~~l~s~~~dg~i~iwd~~~~ 325 (375)
|+++.|++++.+ .+.-++.++.
T Consensus 266 --~d~~~L~v~t~~-~l~~~~~~~~ 287 (296)
T 3e5z_A 266 --PEGRTLYMTVST-EFWSIETNVR 287 (296)
T ss_dssp --TTSCEEEEEETT-EEEEEECSCC
T ss_pred --CCCCEEEEEcCC-eEEEEEcccc
Confidence 788888888775 4556666664
No 179
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.83 E-value=3.6e-18 Score=143.54 Aligned_cols=257 Identities=10% Similarity=-0.000 Sum_probs=171.0
Q ss_pred CceeEEEEecCCCCEEEEeC---------CCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCC---C--e
Q 017194 16 ATATCCIASRDRPGFVASSG---------EDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSG---K--E 81 (375)
Q Consensus 16 ~~i~~~~~~~~~~~~l~s~~---------~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d---~--~ 81 (375)
..+..+++ | |+.++... .++.|.+||+.+++.. .+ ..+..++|+|+|++|+.++.+ + .
T Consensus 15 ~~~~~~~~--d-G~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~ 86 (347)
T 2gop_A 15 AYLSDPRT--K-GELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKVSE 86 (347)
T ss_dssp CEEEEEEE--E-TTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTEEE
T ss_pred EEcccceE--C-CcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCcce
Confidence 45777788 6 77776542 2567999999887753 33 567889999999999887753 3 4
Q ss_pred EEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCC---------------------------CcEEEEeCcC
Q 017194 82 VKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDG---------------------------GDVKIIDIRQ 134 (375)
Q Consensus 82 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------g~i~iwd~~~ 134 (375)
|.+|++.+++.. .+... .. +..++|+|+++.|+.++.+ ..|++||+.+
T Consensus 87 l~~~~~~~g~~~-~l~~~---~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 161 (347)
T 2gop_A 87 IWVADLETLSSK-KILEA---KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES 161 (347)
T ss_dssp EEEEETTTTEEE-EEEEE---SE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT
T ss_pred EEEEECCCCceE-EEEcC---CC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC
Confidence 888888765432 22222 33 8999999999998887632 5699999988
Q ss_pred ceeeeeEecCcccceeEEEEeeCCCcEEEEeecCC-------eEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeE
Q 017194 135 HCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDS-------KLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHA 207 (375)
Q Consensus 135 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 207 (375)
++.+..+. . . .+..+.|+|+| +++++..+. ...+|.+.+++ ...+. . + ..+..
T Consensus 162 ~~~~~~l~-~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~-~------------~-~~~~~ 221 (347)
T 2gop_A 162 EEVIEEFE-K-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMF-E------------K-VSFYA 221 (347)
T ss_dssp TEEEEEEE-E-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEE-E------------E-ESEEE
T ss_pred CeEEeeec-C-C-CcccccCCCCe--EEEEEecccccccccccccEEEeCCCc-eEEec-c------------C-cceee
Confidence 88756676 4 4 78899999998 566665442 33444443443 23332 1 1 22333
Q ss_pred EeecCCccccCCCCEEEEEecC--------CcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcce
Q 017194 208 IAIPDADMLDKTNKICVVAKGD--------GVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKR 279 (375)
Q Consensus 208 ~~~~~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~ 279 (375)
+ +| +|+.|+.++.+ ..|.+|| +++
T Consensus 222 ~--sp------dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~-------------------------------------- 253 (347)
T 2gop_A 222 V--DS------DGERILLYGKPEKKYMSEHNKLYIYD--GKE-------------------------------------- 253 (347)
T ss_dssp E--EE------CSSCEEEEECCSSSCCCSSCEEEEEC--SSC--------------------------------------
T ss_pred E--CC------CCCEEEEEEccccCCccccceEEEEC--CCc--------------------------------------
Confidence 3 66 79888877644 3677777 321
Q ss_pred eEeeeeecCCCccEEE-EEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCC
Q 017194 280 LHLDYSVGGHTAAASC-VAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESE 358 (375)
Q Consensus 280 ~~~~~~~~~~~~~v~~-~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 358 (375)
.......+...+.. +.|+ ++ ++++++.++.++|| +.++ +. ..+..+...|.+++|+| .
T Consensus 254 --~~~l~~~~~~~~~~~~~~s----dg-~~~~~~~~~~~~l~-~~~g---------~~-~~~~~~~~~v~~~~~s~---~ 312 (347)
T 2gop_A 254 --VMGILDEVDRGVGQAKIKD----GK-VYFTLFEEGSVNLY-IWDG---------EI-KPIAKGRHWIMGFDVDE---I 312 (347)
T ss_dssp --EEESSTTCCSEEEEEEEET----TE-EEEEEEETTEEEEE-EESS---------SE-EEEECSSSEEEEEEESS---S
T ss_pred --eEeccccCCcccCCccEEc----Cc-EEEEEecCCcEEEE-EcCC---------ce-EEEecCCCeEEeeeeeC---c
Confidence 11122344566775 7775 66 88899999999999 8754 22 22334567888999987 5
Q ss_pred cEEEeeCCCeE-EEEec
Q 017194 359 NLVVCDTSKVV-KVYSI 374 (375)
Q Consensus 359 ~l~s~~~dg~v-~iw~~ 374 (375)
++++++.++.. .+|.+
T Consensus 313 ~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 313 VVYLKETATRLRELFTW 329 (347)
T ss_dssp EEEEEECSSSCCEEEEE
T ss_pred EEEEEcCCCChHHheEe
Confidence 77777766654 77754
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.83 E-value=1.1e-17 Score=153.86 Aligned_cols=248 Identities=7% Similarity=-0.026 Sum_probs=171.1
Q ss_pred CCCceeEEEEecCCCCEEEEeCCCC-----cEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCe-------
Q 017194 14 HKATATCCIASRDRPGFVASSGEDG-----CICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKE------- 81 (375)
Q Consensus 14 h~~~i~~~~~~~~~~~~l~s~~~d~-----~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~------- 81 (375)
|...+..++|||| +++||.+..++ .|++||+.+++....... ...+..++|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPD-g~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 123 GTVALRGYAFSED-GEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp SCEEEEEEEECTT-SSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCEEEEEEEECCC-CCEEEEEEcCCCCceEEEEEEECCCCCCCccccc-CcccceEEEEeCCCEEEEEEECCcccccccc
Confidence 4446889999999 88888665433 899999999987654322 223678999999999999887765
Q ss_pred ---------EEEEECCCCCcc-cccccccCCCcceeEEEEcCCCCeEEEEeC-----CCcEEEEeCcC------ce-eee
Q 017194 82 ---------VKSFDVHMPASW-RPLESYNYNKEEINQIVCNPKSSFLACADD-----GGDVKIIDIRQ------HC-LYK 139 (375)
Q Consensus 82 ---------i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~------~~-~~~ 139 (375)
|++|++.++... ..+.....|...+..+.|+||+++|+..+. +..|++||+.+ +. ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 999999876532 122222233455789999999999887764 56899999986 43 355
Q ss_pred eEecCcccceeEEEEeeCCCcEEEEeec---CCeEEEeeCCCCCc--ceEEecCCCCCCCCCCcccCC-CceeEEeecCC
Q 017194 140 SLRAGHSSICSSVQFIPWKPWEVISGGL---DSKLVMWDFSKGRP--NKIVNFGLPENNGNAGQCYNP-AFVHAIAIPDA 213 (375)
Q Consensus 140 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~ 213 (375)
.+. .+...+.. .|+|+|+.+++.+.. .+.|.+||+.++.. ...+..+ .. ..+..+++++
T Consensus 281 ~l~-~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~------------~~~~~~~~~~~~~- 345 (710)
T 2xdw_A 281 KLI-DNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPE------------HEKDVLEWVACVR- 345 (710)
T ss_dssp EEE-CSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC------------CSSCEEEEEEEET-
T ss_pred Eee-CCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCC------------CCCCeEEEEEEEc-
Confidence 666 56655554 588998844444433 34799999987652 2344322 12 2577888886
Q ss_pred ccccCCCCEEEEEecCCc--EEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCc
Q 017194 214 DMLDKTNKICVVAKGDGV--VDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTA 291 (375)
Q Consensus 214 ~~~~~~~~~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (375)
++.++++...++. |.+||+.++. ....+..+..
T Consensus 346 -----~~~lv~~~~~~g~~~l~~~~~~~g~----------------------------------------~~~~l~~~~~ 380 (710)
T 2xdw_A 346 -----SNFLVLCYLHDVKNTLQLHDLATGA----------------------------------------LLKIFPLEVG 380 (710)
T ss_dssp -----TTEEEEEEEETTEEEEEEEETTTCC----------------------------------------EEEEECCCSS
T ss_pred -----CCEEEEEEEECCEEEEEEEECCCCC----------------------------------------EEEecCCCCc
Confidence 5788888888884 5666764431 2224445567
Q ss_pred cEEEEEEeecCCCCcEEEE----ecCCCeEEEEeCCCce
Q 017194 292 AASCVAFSMFGERGKYLIS----GGNDKLVKVWDCSRFQ 326 (375)
Q Consensus 292 ~v~~~~~s~~~~~~~~l~s----~~~dg~i~iwd~~~~~ 326 (375)
.+..+.++ |+++.++. ....+.|++||+.+++
T Consensus 381 ~v~~~~~s---~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 381 SVVGYSGQ---KKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEECC---TTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred eEEEEecC---CCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 78888888 78865552 2346889999998765
No 181
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.83 E-value=1.4e-17 Score=138.43 Aligned_cols=257 Identities=11% Similarity=0.014 Sum_probs=179.9
Q ss_pred CCCcEEEEecccCceeeEee------ecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEE
Q 017194 36 EDGCICWFDLRSKDVQLVTD------VGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQI 109 (375)
Q Consensus 36 ~d~~i~iw~~~~~~~~~~~~------~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~ 109 (375)
.+++|.++|.++++....+. ........+.+. +++..++...++.|.+||..+++....+.. ......+
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~----~~~p~~i 89 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG----FTSPRYI 89 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC----CSSEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC----CCCCcEE
Confidence 47899999999988755441 112346777775 355566666679999999998776555532 3567889
Q ss_pred EEcCCCCeEEEEe-CCCcEEEEeCcCceeeeeEecCcc-----cceeEEEEeeCCCcEEEEee-cCCeEEEeeCCCCCcc
Q 017194 110 VCNPKSSFLACAD-DGGDVKIIDIRQHCLYKSLRAGHS-----SICSSVQFIPWKPWEVISGG-LDSKLVMWDFSKGRPN 182 (375)
Q Consensus 110 ~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~ 182 (375)
++++++ .++++. .++.|.+||..+++....+. ... .....+++ .++. ++++.. .++.|.++|+.+++..
T Consensus 90 ~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~-~g~~~~~~~~p~~i~~-~~~~-lyv~~~~~~~~v~viD~~t~~~~ 165 (328)
T 3dsm_A 90 HFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIE-CPDMDMESGSTEQMVQ-YGKY-VYVNCWSYQNRILKIDTETDKVV 165 (328)
T ss_dssp EEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEE-CTTCCTTTCBCCCEEE-ETTE-EEEEECTTCCEEEEEETTTTEEE
T ss_pred EEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEE-cCCccccCCCcceEEE-ECCE-EEEEcCCCCCEEEEEECCCCeEE
Confidence 998888 455554 78999999999998887776 222 15667777 4443 455544 4889999999999888
Q ss_pred eEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecC----------CcEEEEeCCCcceeecccccCCC
Q 017194 183 KIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGD----------GVVDVINIESELNISRSKSTTKP 252 (375)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~~~~ 252 (375)
..+..+ .....++++| ++++++++..+ +.|.++|..+.+..
T Consensus 166 ~~i~~g--------------~~p~~i~~~~------dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~--------- 216 (328)
T 3dsm_A 166 DELTIG--------------IQPTSLVMDK------YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVE--------- 216 (328)
T ss_dssp EEEECS--------------SCBCCCEECT------TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEE---------
T ss_pred EEEEcC--------------CCccceEEcC------CCCEEEEECCCccCCccccCCceEEEEECCCCeEE---------
Confidence 887754 3456788888 78877776654 78999999875211
Q ss_pred CCCceeecccccceeeeeeeecCCcceeEeeeeecCC-CccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeec
Q 017194 253 LKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGH-TAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTS 331 (375)
Q Consensus 253 ~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 331 (375)
..+... ......++++ |++++|.++.. .|.+||..+++
T Consensus 217 -------------------------------~~~~~~~g~~p~~la~~---~d~~~lyv~~~--~v~~~d~~t~~----- 255 (328)
T 3dsm_A 217 -------------------------------KQFKFKLGDWPSEVQLN---GTRDTLYWINN--DIWRMPVEADR----- 255 (328)
T ss_dssp -------------------------------EEEECCTTCCCEEEEEC---TTSCEEEEESS--SEEEEETTCSS-----
T ss_pred -------------------------------EEEecCCCCCceeEEEe---cCCCEEEEEcc--EEEEEECCCCc-----
Confidence 122111 2357899999 89988887765 89999998873
Q ss_pred chhhhhh-h-hcccccceeeeeecCCCCCcEEEe----eCCCeEEEEecC
Q 017194 332 INNDLLI-K-NINLNKKVNWLCTTPTESENLVVC----DTSKVVKVYSIS 375 (375)
Q Consensus 332 ~~~~~~~-~-~~~~~~~v~~~~~~~~~~~~l~s~----~~dg~v~iw~~~ 375 (375)
+.. . ..........++++|.+++.+++. ..++.|.+|+.+
T Consensus 256 ----~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 256 ----VPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp ----CCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred ----eeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 211 1 111245688899998556655665 578899999863
No 182
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.82 E-value=1.1e-16 Score=133.67 Aligned_cols=214 Identities=10% Similarity=0.028 Sum_probs=148.5
Q ss_pred eeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCC----CeEEE
Q 017194 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSG----KEVKS 84 (375)
Q Consensus 9 ~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d----~~i~i 84 (375)
..+.++...+.+++|+|+ +++++++..++.|.+||..+++.......+...+.+++++|+++.+++...+ +.|.+
T Consensus 38 ~~~~~~~~~~~~~~~~~~-g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 38 LEISKKGLQLEGLNFDRQ-GQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp EEEESSCCCEEEEEECTT-SCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred EEEeccCccccCcEECCC-CCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEE
Confidence 445666677899999998 7888888889999999998887655444567789999999999877776665 68999
Q ss_pred EECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeC------CCcEEEEeCcCceeeeeEecCcccceeEEEEeeCC
Q 017194 85 FDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADD------GGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWK 158 (375)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 158 (375)
||.+++.....+.. ..+...+..++++|+++++++... .+.|..+|..+++... +. .....+..++|+|++
T Consensus 117 ~d~~~~~~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~-~~~~~~~~i~~~~dg 193 (333)
T 2dg1_A 117 ATENGDNLQDIIED-LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-II-QNISVANGIALSTDE 193 (333)
T ss_dssp ECTTSCSCEEEECS-SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EE-EEESSEEEEEECTTS
T ss_pred EeCCCCEEEEEEcc-CccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-ee-cCCCcccceEECCCC
Confidence 99886543212221 123457899999999987776653 3567777765554433 32 234457899999999
Q ss_pred CcEEEEeecCCeEEEeeCCC-CCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeC
Q 017194 159 PWEVISGGLDSKLVMWDFSK-GRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINI 237 (375)
Q Consensus 159 ~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 237 (375)
+.++++.+.++.|.+||+.+ +.....+..... . .......+..+++++ +++++++...++.|.+||.
T Consensus 194 ~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~--~----~~~~~~~~~~i~~d~------~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 194 KVLWVTETTANRLHRIALEDDGVTIQPFGATIP--Y----YFTGHEGPDSCCIDS------DDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEE--E----ECCSSSEEEEEEEBT------TCCEEEEEETTTEEEEECT
T ss_pred CEEEEEeCCCCeEEEEEecCCCcCcccccceEE--E----ecCCCCCCCceEECC------CCCEEEEEcCCCEEEEECC
Confidence 74455666788999999974 443332210000 0 000013567899988 7888877777889999998
Q ss_pred C
Q 017194 238 E 238 (375)
Q Consensus 238 ~ 238 (375)
.
T Consensus 262 ~ 262 (333)
T 2dg1_A 262 R 262 (333)
T ss_dssp T
T ss_pred C
Confidence 5
No 183
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.82 E-value=8.4e-16 Score=126.19 Aligned_cols=283 Identities=7% Similarity=-0.019 Sum_probs=193.6
Q ss_pred eecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeE-eeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCC
Q 017194 11 LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLV-TDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHM 89 (375)
Q Consensus 11 l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~-~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~ 89 (375)
+..+...+.++++.++ ++++++...++.|.+||.. ++.... +..+...+.++++.+++...++...++.|..|+..
T Consensus 10 ~~~~~~~~~~i~~d~~-g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~- 86 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDK-GKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK- 86 (299)
T ss_dssp CCSSSCCEEEEEECTT-SCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CCCcCCCccceEECCC-CCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-
Confidence 4455678999999998 7877777767899999988 553322 12345678999999999877777768899999976
Q ss_pred CCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCC
Q 017194 90 PASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDS 169 (375)
Q Consensus 90 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 169 (375)
++ ...+. .......+..+++.++++++++...++.|.+||. +++............+..+++.+++. ++++...++
T Consensus 87 g~-~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~ 162 (299)
T 2z2n_A 87 GI-IKEYT-LPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNA-LWFTENQNN 162 (299)
T ss_dssp SC-EEEEE-CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTT
T ss_pred Cc-EEEEe-CCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCC-EEEEeCCCC
Confidence 22 22221 1123457889999999988777777889999998 55443322213445789999999987 677666778
Q ss_pred eEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeeccccc
Q 017194 170 KLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKST 249 (375)
Q Consensus 170 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 249 (375)
.|..||. +++... +.... ....+..+++.+ ++++.++...++.|.+||. ++...
T Consensus 163 ~i~~~~~-~g~~~~-~~~~~-----------~~~~~~~i~~~~------~g~l~v~~~~~~~i~~~~~-~g~~~------ 216 (299)
T 2z2n_A 163 AIGRITE-SGDITE-FKIPT-----------PASGPVGITKGN------DDALWFVEIIGNKIGRITT-SGEIT------ 216 (299)
T ss_dssp EEEEECT-TCCEEE-EECSS-----------TTCCEEEEEECT------TSSEEEEETTTTEEEEECT-TCCEE------
T ss_pred EEEEEcC-CCcEEE-eeCCC-----------CCCcceeEEECC------CCCEEEEccCCceEEEECC-CCcEE------
Confidence 9999998 555433 32110 124578899988 6887777667889999998 43211
Q ss_pred CCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeee
Q 017194 250 TKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQ 329 (375)
Q Consensus 250 ~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 329 (375)
. .....+...+.+++++ ++|+++++...++.|..||.. ++..
T Consensus 217 --------------------------------~-~~~~~~~~~~~~i~~~---~~g~l~v~~~~~~~i~~~d~~-g~~~- 258 (299)
T 2z2n_A 217 --------------------------------E-FKIPTPNARPHAITAG---AGIDLWFTEWGANKIGRLTSN-NIIE- 258 (299)
T ss_dssp --------------------------------E-EECSSTTCCEEEEEEC---STTCEEEEETTTTEEEEEETT-TEEE-
T ss_pred --------------------------------E-EECCCCCCCceeEEEC---CCCCEEEeccCCceEEEECCC-CceE-
Confidence 0 1222345678899999 899877777678899999984 3211
Q ss_pred ecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEec
Q 017194 330 TSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 330 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
.. ....+...+.++++ + +++++++.. .+.|..++.
T Consensus 259 ------~~-~~~~~~~~~~~i~~-~-~g~l~v~~~-~~~l~~~~~ 293 (299)
T 2z2n_A 259 ------EY-PIQIKSAEPHGICF-D-GETIWFAME-CDKIGKLTL 293 (299)
T ss_dssp ------EE-ECSSSSCCEEEEEE-C-SSCEEEEET-TTEEEEEEE
T ss_pred ------EE-eCCCCCCccceEEe-c-CCCEEEEec-CCcEEEEEc
Confidence 00 11234467888888 6 887666655 455665553
No 184
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.80 E-value=9e-18 Score=154.01 Aligned_cols=249 Identities=12% Similarity=-0.026 Sum_probs=168.8
Q ss_pred cCCCceeEEEEecCCCCEEE-----EeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCe------
Q 017194 13 GHKATATCCIASRDRPGFVA-----SSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKE------ 81 (375)
Q Consensus 13 ~h~~~i~~~~~~~~~~~~l~-----s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~------ 81 (375)
+|+..+..++|||| |++|| .|+.+..|++||+.+++.+..-.........++|+|||+.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SPD-G~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 118 DGTVSLGTWAVSWD-GKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVD 196 (695)
T ss_dssp SSCEEEEEEEECTT-SSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred CCCEEEEEEEECCC-CCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccc
Confidence 45557899999999 88888 4555678999999998865111111111267999999999999988765
Q ss_pred -------EEEEECCCCCcc-cccccccCCCcceeEEEEcCCCCeEEEEeCCC----cEEEEeCcCceeeeeEecCcccce
Q 017194 82 -------VKSFDVHMPASW-RPLESYNYNKEEINQIVCNPKSSFLACADDGG----DVKIIDIRQHCLYKSLRAGHSSIC 149 (375)
Q Consensus 82 -------i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~~v 149 (375)
|++|++.++... ..+.....+...+..+.|+|||++|+..+.++ .|++|+..+++. ..+. .+...+
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~-~~~~~~ 274 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLV-KGVGAK 274 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEE-ECSSCC
T ss_pred cCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEee-cCCCce
Confidence 999999876532 23333334456788999999999998887665 677787655543 4444 455556
Q ss_pred eEEEEeeCCCcEEEEee---cCCeEEEeeCCCCCc--ceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEE
Q 017194 150 SSVQFIPWKPWEVISGG---LDSKLVMWDFSKGRP--NKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICV 224 (375)
Q Consensus 150 ~~~~~~~~~~~~l~~~~---~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~ 224 (375)
....+ +++. +++... .++.|.+||+.+++. ...+.... ....+..++++ ++.+++
T Consensus 275 ~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-----------~~~~l~~~~~~-------~~~lv~ 334 (695)
T 2bkl_A 275 YEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPED-----------SSASLLSVSIV-------GGHLSL 334 (695)
T ss_dssp EEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCC-----------SSCEEEEEEEE-------TTEEEE
T ss_pred EEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCC-----------CCCeEEEEEEE-------CCEEEE
Confidence 66666 6777 666655 358999999987653 23333220 12456777776 478889
Q ss_pred EEecCCcEEEEeCCC-cceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCC-CccEEEEEEeecC
Q 017194 225 VAKGDGVVDVINIES-ELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGH-TAAASCVAFSMFG 302 (375)
Q Consensus 225 ~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~ 302 (375)
+...|+..++|.+.. +. ....+..+ ...+..++++
T Consensus 335 ~~~~dg~~~l~~~~~~g~----------------------------------------~~~~l~~~~~~~v~~~~~s--- 371 (695)
T 2bkl_A 335 EYLKDATSEVRVATLKGK----------------------------------------PVRTVQLPGVGAASNLMGL--- 371 (695)
T ss_dssp EEEETTEEEEEEEETTCC----------------------------------------EEEECCCSSSSEECCCBSC---
T ss_pred EEEECCEEEEEEEeCCCC----------------------------------------eeEEecCCCCeEEEEeecC---
Confidence 999999888876542 11 11223333 4567777788
Q ss_pred CCCcEEE----EecCCCeEEEEeCCCcee
Q 017194 303 ERGKYLI----SGGNDKLVKVWDCSRFQG 327 (375)
Q Consensus 303 ~~~~~l~----s~~~dg~i~iwd~~~~~~ 327 (375)
|+++.++ +....+.|++||+.+++.
T Consensus 372 ~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 372 EDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp TTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 7887666 344568899999988653
No 185
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.80 E-value=2.2e-18 Score=147.54 Aligned_cols=255 Identities=7% Similarity=0.033 Sum_probs=165.0
Q ss_pred EEEecccCceeeEeeecCcc-----EEEEEEeCCCCeEEEEcCC---CeEEEEECCCCCcccccccccCCCcceeEEEEc
Q 017194 41 CWFDLRSKDVQLVTDVGNGP-----VTSLCFKSGNEDIIYVSSG---KEVKSFDVHMPASWRPLESYNYNKEEINQIVCN 112 (375)
Q Consensus 41 ~iw~~~~~~~~~~~~~~~~~-----v~~l~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 112 (375)
...|..+++.+..+..+... +..++|+|+|++|+.+... ..|.+||+.+++... +. ..+......+.|+
T Consensus 13 ~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~-l~--~~~~~~~~~~~~s 89 (396)
T 3c5m_A 13 TFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ-LT--EGKGDNTFGGFIS 89 (396)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE-CC--CSSCBCTTTCEEC
T ss_pred eeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE-ee--cCCCCccccceEC
Confidence 34577777776666554333 6788999999998877543 478899988764322 21 1112223347899
Q ss_pred CCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeE-------------------EEEeeCCCcEEEEe-----ecC
Q 017194 113 PKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSS-------------------VQFIPWKPWEVISG-----GLD 168 (375)
Q Consensus 113 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~l~~~-----~~d 168 (375)
|++++|+.++.++.|++||+.+++...... .+...... +.|+|+++. ++.. ..+
T Consensus 90 pdg~~l~~~~~~~~l~~~d~~~~~~~~~~~-~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~-~~~~~~~~~~~~ 167 (396)
T 3c5m_A 90 TDERAFFYVKNELNLMKVDLETLEEQVIYT-VDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSW-EKFAEFYHTNPT 167 (396)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEE-CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSH-HHHHHHHHTCCC
T ss_pred CCCCEEEEEEcCCcEEEEECCCCCcEEEEe-cccccCCCCCEEEeccCCccccccccccccCCCCcc-eeeeeeccCCCc
Confidence 999999999999999999998887655554 34332222 345677763 3332 456
Q ss_pred CeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecC------CcEEEEeCCCcce
Q 017194 169 SKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGD------GVVDVINIESELN 242 (375)
Q Consensus 169 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~ 242 (375)
..|++||+.+++...... +...+..+.|+|. +++.|+..+.+ ..|.+||+.+...
T Consensus 168 ~~l~~~d~~~g~~~~~~~--------------~~~~~~~~~~sp~-----dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~ 228 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQ--------------DTAWLGHPIYRPF-----DDSTVGFCHEGPHDLVDARMWLVNEDGSNV 228 (396)
T ss_dssp EEEEEEETTTCCEEEEEE--------------ESSCEEEEEEETT-----EEEEEEEEECSCSSSCSCCCEEEETTSCCC
T ss_pred ceEEEEECCCCcEEeecc--------------CCcccccceECCC-----CCCEEEEEecCCCCCCCceEEEEECCCCce
Confidence 789999999877654443 2456888999882 36666655543 3578888764311
Q ss_pred eecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCC--CccEEEEEEeecCCCCcEEEEecCC-----C
Q 017194 243 ISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGH--TAAASCVAFSMFGERGKYLISGGND-----K 315 (375)
Q Consensus 243 ~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~~~~l~s~~~d-----g 315 (375)
. .+..+ ...+..++|+ |+|++|+.++.+ +
T Consensus 229 --------------------------------------~---~l~~~~~~~~~~~~~~s---pdg~~l~~~~~~~~~~~~ 264 (396)
T 3c5m_A 229 --------------------------------------R---KIKEHAEGESCTHEFWI---PDGSAMAYVSYFKGQTDR 264 (396)
T ss_dssp --------------------------------------E---ESSCCCTTEEEEEEEEC---TTSSCEEEEEEETTTCCE
T ss_pred --------------------------------------e---EeeccCCCccccceEEC---CCCCEEEEEecCCCCccc
Confidence 1 11112 2357888999 999988776543 5
Q ss_pred eEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEee----------------CCCeEEEEecC
Q 017194 316 LVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCD----------------TSKVVKVYSIS 375 (375)
Q Consensus 316 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------------~dg~v~iw~~~ 375 (375)
.|++||+.+++.. .+....+ .. +.|+|.+|+++++++ .++.|++|++.
T Consensus 265 ~l~~~d~~~g~~~-------~l~~~~~----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 265 VIYKANPETLENE-------EVMVMPP----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp EEEEECTTTCCEE-------EEEECCS----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT
T ss_pred eEEEEECCCCCeE-------EeeeCCC----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc
Confidence 5999999887432 1111111 22 778875888887754 34789999863
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.80 E-value=1.4e-16 Score=128.53 Aligned_cols=190 Identities=11% Similarity=0.012 Sum_probs=149.4
Q ss_pred CCEEEEeCCCCcEEEEecccCceeeEeeecC-ccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcce
Q 017194 28 PGFVASSGEDGCICWFDLRSKDVQLVTDVGN-GPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEI 106 (375)
Q Consensus 28 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v 106 (375)
+++|++++.|+.|.+||.++++.+..+..+. ..+.++.++|+|+.++ +.++.|..||. +++....+... ....+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~--~~~~~ 79 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAP--AGCEM 79 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECC--TTCEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCC--CCccc
Confidence 5799999999999999999999999998765 5789999999999877 45788999998 56554444331 13468
Q ss_pred eEEEEcCCCCeEEEEeC-CCcEEEEeCcCceeeeeEec-----CcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCC
Q 017194 107 NQIVCNPKSSFLACADD-GGDVKIIDIRQHCLYKSLRA-----GHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR 180 (375)
Q Consensus 107 ~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~ 180 (375)
.++.+.++++++++.+. ++.|..+|. +++.+..+.. .+......+++.++|+ ++++...++.|..||.. ++
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEETTTTEEEEECTT-SC
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCC-EEEEecCCCEEEEECCC-CC
Confidence 88999999999999887 778888886 6777666541 1223455677889998 78899999999999988 99
Q ss_pred cceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeec
Q 017194 181 PNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISR 245 (375)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 245 (375)
.+..+... ..+.++...+ ++++++++..++.|..+|..+++....
T Consensus 157 ~~w~~~~~--------------~~~~~~~~~~------~g~~~v~~~~~~~v~~~d~~tG~~~w~ 201 (276)
T 3no2_A 157 LLNSVKLS--------------GTPFSSAFLD------NGDCLVACGDAHCFVQLNLESNRIVRR 201 (276)
T ss_dssp EEEEEECS--------------SCCCEEEECT------TSCEEEECBTTSEEEEECTTTCCEEEE
T ss_pred EEEEEECC--------------CCccceeEcC------CCCEEEEeCCCCeEEEEeCcCCcEEEE
Confidence 98888743 3455667777 799999888888999999997755433
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.79 E-value=1.3e-16 Score=130.86 Aligned_cols=240 Identities=11% Similarity=-0.018 Sum_probs=164.5
Q ss_pred ceeeEeeecCccEEEEEEeCCCC-eEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcE
Q 017194 49 DVQLVTDVGNGPVTSLCFKSGNE-DIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDV 127 (375)
Q Consensus 49 ~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 127 (375)
..+..+..+.....+++|+|+++ .++++..++.|..|+..++ . ..+..+...+.+++++++++++++...++.|
T Consensus 18 ~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~---~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i 92 (296)
T 3e5z_A 18 AEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--L---SPEMHPSHHQNGHCLNKQGHLIACSHGLRRL 92 (296)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--E---EEEESSCSSEEEEEECTTCCEEEEETTTTEE
T ss_pred CcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--e---EEEECCCCCcceeeECCCCcEEEEecCCCeE
Confidence 33455555667788999999998 6777888899999999864 2 2333346678999999999988777777899
Q ss_pred EEEeCcCceeeeeEec--C-cccceeEEEEeeCCCcEEEE----ee-------------cCCeEEEeeCCCCCcceEEec
Q 017194 128 KIIDIRQHCLYKSLRA--G-HSSICSSVQFIPWKPWEVIS----GG-------------LDSKLVMWDFSKGRPNKIVNF 187 (375)
Q Consensus 128 ~iwd~~~~~~~~~~~~--~-~~~~v~~~~~~~~~~~~l~~----~~-------------~d~~i~~wd~~~~~~~~~~~~ 187 (375)
.+||..+++....... . ....+..++++|+|. ++++ ++ ..+.|..++.. ++ ...+.
T Consensus 93 ~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~- 168 (296)
T 3e5z_A 93 ERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPI- 168 (296)
T ss_dssp EEECSTTCCEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEE-
T ss_pred EEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEee-
Confidence 9999977765433220 1 123567899999997 6776 33 13466666655 43 33332
Q ss_pred CCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCC-CcceeecccccCCCCCCceeecccccce
Q 017194 188 GLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIE-SELNISRSKSTTKPLKGSQSTSKVNIRD 266 (375)
Q Consensus 188 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~s~~g~~~ 266 (375)
. .......++|+| +++.+++.+.++.|.+|++. ++...
T Consensus 169 ~------------~~~~~~gi~~s~------dg~~lv~~~~~~~i~~~~~~~~g~~~----------------------- 207 (296)
T 3e5z_A 169 R------------DRVKPNGLAFLP------SGNLLVSDTGDNATHRYCLNARGETE----------------------- 207 (296)
T ss_dssp C------------CCSSEEEEEECT------TSCEEEEETTTTEEEEEEECSSSCEE-----------------------
T ss_pred c------------CCCCCccEEECC------CCCEEEEeCCCCeEEEEEECCCCcCc-----------------------
Confidence 1 235678999999 79888777778999999987 22110
Q ss_pred eeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccc
Q 017194 267 AEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKK 346 (375)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (375)
...... ..+...+..++++ ++|+++++. ++.|.+||.. + +.+..+..+..
T Consensus 208 -----------~~~~~~---~~~~~~p~~i~~d---~~G~l~v~~--~~~v~~~~~~-g---------~~~~~~~~~~~- 257 (296)
T 3e5z_A 208 -----------YQGVHF---TVEPGKTDGLRVD---AGGLIWASA--GDGVHVLTPD-G---------DELGRVLTPQT- 257 (296)
T ss_dssp -----------EEEEEE---CCSSSCCCSEEEB---TTSCEEEEE--TTEEEEECTT-S---------CEEEEEECSSC-
T ss_pred -----------CCCeEe---eCCCCCCCeEEEC---CCCCEEEEc--CCeEEEECCC-C---------CEEEEEECCCC-
Confidence 000111 2234456778999 899877766 7889999987 4 33344445555
Q ss_pred eeeeeecCCCCCcEEEeeCCCe
Q 017194 347 VNWLCTTPTESENLVVCDTSKV 368 (375)
Q Consensus 347 v~~~~~~~~~~~~l~s~~~dg~ 368 (375)
+.+++|..++++.|++++.++.
T Consensus 258 ~~~~~f~~~d~~~L~v~t~~~l 279 (296)
T 3e5z_A 258 TSNLCFGGPEGRTLYMTVSTEF 279 (296)
T ss_dssp CCEEEEESTTSCEEEEEETTEE
T ss_pred ceeEEEECCCCCEEEEEcCCeE
Confidence 8899995338888888887753
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.79 E-value=7.2e-17 Score=148.47 Aligned_cols=273 Identities=8% Similarity=-0.053 Sum_probs=174.4
Q ss_pred cCCCCEEEEeCC-CC----cEEEEecccCceeeEee------ecCccEEEEEEeCCCCeEEEEcCCC-----eEEEEECC
Q 017194 25 RDRPGFVASSGE-DG----CICWFDLRSKDVQLVTD------VGNGPVTSLCFKSGNEDIIYVSSGK-----EVKSFDVH 88 (375)
Q Consensus 25 ~~~~~~l~s~~~-d~----~i~iw~~~~~~~~~~~~------~~~~~v~~l~~~~~~~~l~~~~~d~-----~i~iwd~~ 88 (375)
|+ |++++.... .+ .+.+.+...++....+. +|...+..++|+|||++|+.+..++ .|++||+.
T Consensus 81 ~d-G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~ 159 (710)
T 2xdw_A 81 KK-GKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD 159 (710)
T ss_dssp EE-TTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETT
T ss_pred EE-CCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECC
Confidence 77 666554332 22 34444444444332222 2334688999999999998876543 89999999
Q ss_pred CCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCc----------------EEEEeCcCceee--eeEec-Ccccce
Q 017194 89 MPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGD----------------VKIIDIRQHCLY--KSLRA-GHSSIC 149 (375)
Q Consensus 89 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~----------------i~iwd~~~~~~~--~~~~~-~~~~~v 149 (375)
+++..... .. ...+..++|+||++.|+.++.++. |++|++.+++.. ..+.. .|...+
T Consensus 160 tg~~~~~~--~~--~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~ 235 (710)
T 2xdw_A 160 GAKELPDV--LE--RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWM 235 (710)
T ss_dssp TTEEEEEE--EE--EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCE
T ss_pred CCCCCccc--cc--CcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEE
Confidence 87643321 11 223678999999999999887765 999999876532 22220 245567
Q ss_pred eEEEEeeCCCcEEEEeec-----CCeEEEeeCCC------CC-cceEEecCCCCCCCCCCcccCCCceeEEeecCCcccc
Q 017194 150 SSVQFIPWKPWEVISGGL-----DSKLVMWDFSK------GR-PNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLD 217 (375)
Q Consensus 150 ~~~~~~~~~~~~l~~~~~-----d~~i~~wd~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 217 (375)
..+.|+|+|++ |+..+. +..|++||+.+ +. ....+... ...+.. .++|
T Consensus 236 ~~~~~SpDg~~-l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~-------------~~~~~~-~~s~----- 295 (710)
T 2xdw_A 236 GGAELSDDGRY-VLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN-------------FEGEYD-YVTN----- 295 (710)
T ss_dssp EEEEECTTSCE-EEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS-------------SSSCEE-EEEE-----
T ss_pred EEEEEcCCCCE-EEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC-------------CCcEEE-EEec-----
Confidence 89999999994 555443 57899999986 43 34444422 223333 4666
Q ss_pred CCCCEEEEEecC----CcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCC--c
Q 017194 218 KTNKICVVAKGD----GVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHT--A 291 (375)
Q Consensus 218 ~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 291 (375)
+++.|+..+.. +.|.+||+.++... . ...+..|. .
T Consensus 296 -dg~~l~~~s~~~~~~~~l~~~d~~~~~~~-----------------------------------~---~~~l~~~~~~~ 336 (710)
T 2xdw_A 296 -EGTVFTFKTNRHSPNYRLINIDFTDPEES-----------------------------------K---WKVLVPEHEKD 336 (710)
T ss_dssp -ETTEEEEEECTTCTTCEEEEEETTSCCGG-----------------------------------G---CEEEECCCSSC
T ss_pred -cCCEEEEEECCCCCCCEEEEEeCCCCCcc-----------------------------------c---ceeccCCCCCC
Confidence 67777666543 36999998763100 0 11222332 3
Q ss_pred cEEEEEEeecCCCCcEEEEecCCCe--EEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEe-e---C
Q 017194 292 AASCVAFSMFGERGKYLISGGNDKL--VKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVC-D---T 365 (375)
Q Consensus 292 ~v~~~~~s~~~~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-~---~ 365 (375)
.+..++|+ +++.++++...|+. |++|++.+++ .+..+..+.+.+..+.++| +++.++.. + .
T Consensus 337 ~~~~~~~~---~~~~lv~~~~~~g~~~l~~~~~~~g~---------~~~~l~~~~~~v~~~~~s~-d~~~l~~~~ss~~~ 403 (710)
T 2xdw_A 337 VLEWVACV---RSNFLVLCYLHDVKNTLQLHDLATGA---------LLKIFPLEVGSVVGYSGQK-KDTEIFYQFTSFLS 403 (710)
T ss_dssp EEEEEEEE---TTTEEEEEEEETTEEEEEEEETTTCC---------EEEEECCCSSEEEEEECCT-TCSEEEEEEECSSC
T ss_pred eEEEEEEE---cCCEEEEEEEECCEEEEEEEECCCCC---------EEEecCCCCceEEEEecCC-CCCEEEEEEeCCCC
Confidence 67888998 78888999988885 5667775653 2233444567788899998 77655532 2 4
Q ss_pred CCeEEEEec
Q 017194 366 SKVVKVYSI 374 (375)
Q Consensus 366 dg~v~iw~~ 374 (375)
.+.|+.||+
T Consensus 404 P~~i~~~d~ 412 (710)
T 2xdw_A 404 PGIIYHCDL 412 (710)
T ss_dssp CCEEEEEET
T ss_pred CCEEEEEEC
Confidence 578999986
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.79 E-value=6e-17 Score=148.55 Aligned_cols=274 Identities=9% Similarity=-0.004 Sum_probs=169.9
Q ss_pred ecCCCCEEEEeCCCC---cEEEE--ecccCceeeEee------ecCccEEEEEEeCCCCeEEEE-----cCCCeEEEEEC
Q 017194 24 SRDRPGFVASSGEDG---CICWF--DLRSKDVQLVTD------VGNGPVTSLCFKSGNEDIIYV-----SSGKEVKSFDV 87 (375)
Q Consensus 24 ~~~~~~~l~s~~~d~---~i~iw--~~~~~~~~~~~~------~~~~~v~~l~~~~~~~~l~~~-----~~d~~i~iwd~ 87 (375)
+|+ |++++....++ .-.|| +...++....+. +|...+..++|||||++|+.+ +.+..|++||+
T Consensus 76 ~~d-G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl 154 (695)
T 2bkl_A 76 SRR-NGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDV 154 (695)
T ss_dssp EEE-TTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEET
T ss_pred EEE-CCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEEC
Confidence 477 66666554432 34444 444444333332 345578999999999999844 33468999999
Q ss_pred CCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCc-------------EEEEeCcCcee----eeeEecCccccee
Q 017194 88 HMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGD-------------VKIIDIRQHCL----YKSLRAGHSSICS 150 (375)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-------------i~iwd~~~~~~----~~~~~~~~~~~v~ 150 (375)
.+++.... ..+. ......++|+||++.|+.++.+.. |++|++.+++. +.... .+...+.
T Consensus 155 ~tg~~~~~-~~~~--~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~-~~~~~~~ 230 (695)
T 2bkl_A 155 DSGEWSKV-DVIE--GGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERT-GDPTTFL 230 (695)
T ss_dssp TTCCBCSS-CCBS--CCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCC-CCTTCEE
T ss_pred CCCCCcCC-cccC--cccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecC-CCCEEEE
Confidence 98764311 1111 112268999999999999988766 99999987752 22223 3456788
Q ss_pred EEEEeeCCCcEEEEeecCC----eEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEE
Q 017194 151 SVQFIPWKPWEVISGGLDS----KLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVA 226 (375)
Q Consensus 151 ~~~~~~~~~~~l~~~~~d~----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~ 226 (375)
.+.|+|+|++ |+..+.++ .|++||..+++. ..+... ...+....+ + ++.+++.+
T Consensus 231 ~~~~SpDG~~-l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~-------------~~~~~~~~~-~------~g~l~~~s 288 (695)
T 2bkl_A 231 QSDLSRDGKY-LFVYILRGWSENDVYWKRPGEKDF-RLLVKG-------------VGAKYEVHA-W------KDRFYVLT 288 (695)
T ss_dssp EEEECTTSCC-EEEEEEETTTEEEEEEECTTCSSC-EEEEEC-------------SSCCEEEEE-E------TTEEEEEE
T ss_pred EEEECCCCCE-EEEEEeCCCCceEEEEEcCCCCce-EEeecC-------------CCceEEEEe-c------CCcEEEEE
Confidence 9999999995 55555444 677777655543 333322 233444445 3 45544444
Q ss_pred e---cCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCC-CccEEEEEEeecC
Q 017194 227 K---GDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGH-TAAASCVAFSMFG 302 (375)
Q Consensus 227 ~---~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~ 302 (375)
. .++.|.+||+.++... .++. .+..+ ...+..++++
T Consensus 289 ~~~~~~~~l~~~d~~~~~~~-----------------------------------~~~~--l~~~~~~~~l~~~~~~--- 328 (695)
T 2bkl_A 289 DEGAPRQRVFEVDPAKPARA-----------------------------------SWKE--IVPEDSSASLLSVSIV--- 328 (695)
T ss_dssp CTTCTTCEEEEEBTTBCSGG-----------------------------------GCEE--EECCCSSCEEEEEEEE---
T ss_pred CCCCCCCEEEEEeCCCCCcc-----------------------------------CCeE--EecCCCCCeEEEEEEE---
Confidence 4 2578999998763210 0011 11122 4457778886
Q ss_pred CCCcEEEEecCCCeEEEEeCC-Cceeeeecchhhhhhhhccc-ccceeeeeecCCCCCcEEE----eeCCCeEEEEecC
Q 017194 303 ERGKYLISGGNDKLVKVWDCS-RFQGVQTSINNDLLIKNINL-NKKVNWLCTTPTESENLVV----CDTSKVVKVYSIS 375 (375)
Q Consensus 303 ~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s----~~~dg~v~iw~~~ 375 (375)
++.++++...|+..+||.+. .+ .....+..+ .+.+..+.++| +++.|+. ....+.|++||+.
T Consensus 329 -~~~lv~~~~~dg~~~l~~~~~~g---------~~~~~l~~~~~~~v~~~~~s~-d~~~l~~~~ss~~~P~~v~~~d~~ 396 (695)
T 2bkl_A 329 -GGHLSLEYLKDATSEVRVATLKG---------KPVRTVQLPGVGAASNLMGLE-DLDDAYYVFTSFTTPRQIYKTSVS 396 (695)
T ss_dssp -TTEEEEEEEETTEEEEEEEETTC---------CEEEECCCSSSSEECCCBSCT-TCSEEEEEEEETTEEEEEEEEETT
T ss_pred -CCEEEEEEEECCEEEEEEEeCCC---------CeeEEecCCCCeEEEEeecCC-CCCEEEEEEcCCCCCCEEEEEECC
Confidence 67788999999988888665 23 111222333 56778888888 7776663 3345789999863
No 190
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.78 E-value=2.6e-16 Score=127.24 Aligned_cols=240 Identities=8% Similarity=-0.028 Sum_probs=166.5
Q ss_pred ceeEEEEecCCCCEEE-EeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccc
Q 017194 17 TATCCIASRDRPGFVA-SSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRP 95 (375)
Q Consensus 17 ~i~~~~~~~~~~~~l~-s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 95 (375)
...+++++++ +++++ +...++.|.+|+..+.........+...+.++++.++++.+++.. ++.|.+||...... ..
T Consensus 25 ~p~~i~~~~~-g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~ 101 (270)
T 1rwi_B 25 SPSGVAVDSA-GNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TV 101 (270)
T ss_dssp CEEEEEECTT-CCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EE
T ss_pred CccceEECCC-CCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-ee
Confidence 6788999998 77777 557788999999766543322223345678899999998666655 88999999875432 11
Q ss_pred cccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEee
Q 017194 96 LESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWD 175 (375)
Q Consensus 96 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd 175 (375)
+.. .....+..+++.++++++++...++.|.+|+..+........ .....+.++++++++. ++++...++.|.+||
T Consensus 102 ~~~--~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~-~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~ 177 (270)
T 1rwi_B 102 LPF--DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF-TGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLE 177 (270)
T ss_dssp CCC--CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCC-CSCCSCCCEEECTTCC-EEEEEGGGTEEEEEC
T ss_pred eec--CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeecc-ccCCCceeEEEeCCCC-EEEEECCCCEEEEEe
Confidence 111 113568899999999877777778899999865544332222 2334678999999997 777777788999999
Q ss_pred CCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCC
Q 017194 176 FSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKG 255 (375)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 255 (375)
........... . ....+..+++.+ ++.++++...++.|.+||..+....
T Consensus 178 ~~~~~~~~~~~-~------------~~~~p~~i~~d~------~g~l~v~~~~~~~v~~~~~~~~~~~------------ 226 (270)
T 1rwi_B 178 AESNNQVVLPF-T------------DITAPWGIAVDE------AGTVYVTEHNTNQVVKLLAGSTTST------------ 226 (270)
T ss_dssp TTTCCEEECCC-S------------SCCSEEEEEECT------TCCEEEEETTTSCEEEECTTCSCCE------------
T ss_pred cCCCceEeecc-c------------CCCCceEEEECC------CCCEEEEECCCCcEEEEcCCCCcce------------
Confidence 87654322111 1 124678899988 6877777777889999998753111
Q ss_pred ceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCc
Q 017194 256 SQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325 (375)
Q Consensus 256 ~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~ 325 (375)
.....+...+.+++++ ++|+++++...++.|+++++...
T Consensus 227 ----------------------------~~~~~~~~~p~~i~~~---~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 227 ----------------------------VLPFTGLNTPLAVAVD---SDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp ----------------------------ECCCCSCSCEEEEEEC---TTCCEEEEEGGGTEEEEECCCGG
T ss_pred ----------------------------eeccCCCCCceeEEEC---CCCCEEEEECCCCEEEEEcCCCc
Confidence 0111223568899999 89998899999999999998875
No 191
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.78 E-value=4.7e-16 Score=129.20 Aligned_cols=240 Identities=9% Similarity=-0.029 Sum_probs=171.4
Q ss_pred ceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCccccc
Q 017194 17 TATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPL 96 (375)
Q Consensus 17 ~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 96 (375)
....+.+.. ++++++...++.|.+||..+++.+.++. .......++++++++..++...++.|.+||..+++....+
T Consensus 45 ~~~~i~~~~--~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i 121 (328)
T 3dsm_A 45 VAQSMVIRD--GIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYI 121 (328)
T ss_dssp CEEEEEEET--TEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEE
T ss_pred cceEEEEEC--CEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEE
Confidence 356677753 4666677778999999999999988885 3567889999999854444447899999999986544433
Q ss_pred cccc--CCCcceeEEEEcCCCCeEEEEe--CCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecC----
Q 017194 97 ESYN--YNKEEINQIVCNPKSSFLACAD--DGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLD---- 168 (375)
Q Consensus 97 ~~~~--~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---- 168 (375)
..-. +.......+++ ++..++++. .++.|.++|+.+++.+..+. . ......++++|+|+ +++++..+
T Consensus 122 ~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~-~-g~~p~~i~~~~dG~-l~v~~~~~~~~~ 196 (328)
T 3dsm_A 122 ECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELT-I-GIQPTSLVMDKYNK-MWTITDGGYEGS 196 (328)
T ss_dssp ECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEE-C-SSCBCCCEECTTSE-EEEEBCCBCTTC
T ss_pred EcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEE-c-CCCccceEEcCCCC-EEEEECCCccCC
Confidence 3211 01114556777 344555554 48899999999999888887 3 34567899999997 66666554
Q ss_pred ------CeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcce
Q 017194 169 ------SKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELN 242 (375)
Q Consensus 169 ------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 242 (375)
+.|.++|..+++....+... .......++++| +++.|+++.. .|.+||..+++.
T Consensus 197 ~~~~~~~~v~~id~~t~~v~~~~~~~------------~g~~p~~la~~~------d~~~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 197 PYGYEAPSLYRIDAETFTVEKQFKFK------------LGDWPSEVQLNG------TRDTLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp SSCBCCCEEEEEETTTTEEEEEEECC------------TTCCCEEEEECT------TSCEEEEESS--SEEEEETTCSSC
T ss_pred ccccCCceEEEEECCCCeEEEEEecC------------CCCCceeEEEec------CCCEEEEEcc--EEEEEECCCCce
Confidence 78999999988877777643 123678999998 7888888765 899999987532
Q ss_pred eecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCC-CCcEEEEe----cCCCeE
Q 017194 243 ISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGE-RGKYLISG----GNDKLV 317 (375)
Q Consensus 243 ~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~~~~l~s~----~~dg~i 317 (375)
... ..+.........++++ | ++.++++. ..++.|
T Consensus 257 ~~~--------------------------------------~~~~~~~~~p~gi~vd---p~~g~lyva~~~~y~~~~~V 295 (328)
T 3dsm_A 257 PVR--------------------------------------PFLEFRDTKYYGLTVN---PNNGEVYVADAIDYQQQGIV 295 (328)
T ss_dssp CSS--------------------------------------CSBCCCSSCEEEEEEC---TTTCCEEEEECTTSSSEEEE
T ss_pred eee--------------------------------------eeecCCCCceEEEEEc---CCCCeEEEEcccccccCCEE
Confidence 100 0111113567889999 7 56666666 678999
Q ss_pred EEEeCCCce
Q 017194 318 KVWDCSRFQ 326 (375)
Q Consensus 318 ~iwd~~~~~ 326 (375)
.+||.. ++
T Consensus 296 ~v~d~~-g~ 303 (328)
T 3dsm_A 296 YRYSPQ-GK 303 (328)
T ss_dssp EEECTT-CC
T ss_pred EEECCC-CC
Confidence 999998 63
No 192
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.78 E-value=2.6e-15 Score=126.43 Aligned_cols=284 Identities=12% Similarity=-0.011 Sum_probs=182.5
Q ss_pred EEecCCCCEEEEeCC--CC---cEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEc----------CCCeEEEEE
Q 017194 22 IASRDRPGFVASSGE--DG---CICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVS----------SGKEVKSFD 86 (375)
Q Consensus 22 ~~~~~~~~~l~s~~~--d~---~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~----------~d~~i~iwd 86 (375)
...|+ ++++++... .. +|.++|..+++.+..+.....+ .++++||+++++++. .++.|.+||
T Consensus 27 ~~~~~-~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 27 APGAD-GRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred cCCCC-CCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEE
Confidence 34466 666666653 33 8899999999988887754444 999999999998886 357899999
Q ss_pred CCCCCcccccccc-cC---CCcceeEEEEcCCCCeEEEEeC--CCcEEEEeCcCceeeee-EecCcccceeEEEEeeCCC
Q 017194 87 VHMPASWRPLESY-NY---NKEEINQIVCNPKSSFLACADD--GGDVKIIDIRQHCLYKS-LRAGHSSICSSVQFIPWKP 159 (375)
Q Consensus 87 ~~~~~~~~~~~~~-~~---~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~~ 159 (375)
..+.+....+... .. +......+.|+||+++|+++.. ++.|.++| .+++.+.. +. ... ++.+.|+++
T Consensus 104 ~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~--~~~---~~~~~~~~~ 177 (373)
T 2mad_H 104 PVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS--SPT---CYHIHPGAP 177 (373)
T ss_pred CCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC--CCc---eEEEEeCCC
Confidence 9876544433321 00 0123457899999999998874 47899999 99988877 65 222 255677776
Q ss_pred cEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCc-eeEEeecCCccccCCCCEEEEEecCCcEEEEeCC
Q 017194 160 WEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAF-VHAIAIPDADMLDKTNKICVVAKGDGVVDVINIE 238 (375)
Q Consensus 160 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 238 (375)
..+++.+.||.+.++|. +++......... . . ....+ .....+.+ ++..++..+.++.+.+.|+.
T Consensus 178 ~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~-~------~-~~~~p~~~~~~~~~------~~~~~~~~~~~~~v~vid~~ 242 (373)
T 2mad_H 178 STFYLLCAQGGLAKTDH-AGGAAGAGLVGA-M------L-TAAQNLLTQPAQAN------KSGRIVWPVYSGKILQADIS 242 (373)
T ss_pred ceEEEEcCCCCEEEEEC-CCcEEEEEeccc-c------c-cCCcceeecceeEe------cCCEEEEEcCCceEEEEecc
Confidence 57788889999999999 777664332100 0 0 00111 12234454 34444444477899999997
Q ss_pred CcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeee----eecCCCccEEEEEEeecCCCCcEEEEecC-
Q 017194 239 SELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDY----SVGGHTAAASCVAFSMFGERGKYLISGGN- 313 (375)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~~~~~~~l~s~~~- 313 (375)
+........ +.... ...........++++ |+++.+..+..
T Consensus 243 ~~~~~v~~~--------------------------------~~~~~~~~~~~~~~p~g~~~~~~s---~d~~~lyV~~~~ 287 (373)
T 2mad_H 243 AAGATNKAP--------------------------------IDALSGGRKADTWRPGGWQQVAYL---KSSDGIYLLTSE 287 (373)
T ss_pred CCcceEeee--------------------------------eeecCCcccccceecCceEeEEEC---CCCCEEEEEecc
Confidence 532111000 00000 000012234456788 88887776542
Q ss_pred ---------CCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCC-cEEEee-CCCeEEEEecC
Q 017194 314 ---------DKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESE-NLVVCD-TSKVVKVYSIS 375 (375)
Q Consensus 314 ---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~-~dg~v~iw~~~ 375 (375)
++.|.++|..+.+ .+..+ ........++|+| ||+ .++++. .++.|.+||+.
T Consensus 288 ~~~~~~~~~~~~V~VID~~t~~---------vv~~i-~~g~~p~~i~~s~-Dg~~~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 288 QSAWKLHAAAKEVTSVTGLVGQ---------TSSQI-SLGHDVDAISVAQ-DGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred CCcccccCCCCeEEEEECCCCE---------EEEEE-ECCCCcCeEEECC-CCCeEEEEEcCCCCeEEEEECC
Confidence 3589999999984 33333 2233678999999 888 777777 58999999963
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.77 E-value=9.2e-15 Score=129.19 Aligned_cols=299 Identities=12% Similarity=0.046 Sum_probs=197.0
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecc--cCceeeEeeecCccEEEEEEe----CCCCeEEEEc
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLR--SKDVQLVTDVGNGPVTSLCFK----SGNEDIIYVS 77 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~--~~~~~~~~~~~~~~v~~l~~~----~~~~~l~~~~ 77 (375)
+++.+.++... ..+..+.|+|| ++++++++.|+.|.+||+. +++.+..+... .....++|+ |+|++++++.
T Consensus 186 t~~v~~~i~~g-~~p~~v~~SpD-Gr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n 262 (567)
T 1qks_A 186 TYEIKTVLDTG-YAVHISRLSAS-GRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSIETSKMEGWEDKYAIAGA 262 (567)
T ss_dssp TCCEEEEEECS-SCEEEEEECTT-SCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEEEECCSTTCTTTEEEEEE
T ss_pred CCeEEEEEeCC-CCccceEECCC-CCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCceeEEccccCCCCCEEEEEE
Confidence 45555666543 35678999999 8999999999999999995 77878777753 346789999 6999888776
Q ss_pred C-CCeEEEEECCCCCccccccccc-------CCCc-ceeEEEEcCCCCeE-EEEeCCCcEEEEeCcCcee--eeeEecCc
Q 017194 78 S-GKEVKSFDVHMPASWRPLESYN-------YNKE-EINQIVCNPKSSFL-ACADDGGDVKIIDIRQHCL--YKSLRAGH 145 (375)
Q Consensus 78 ~-d~~i~iwd~~~~~~~~~~~~~~-------~~~~-~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~--~~~~~~~~ 145 (375)
. ++++.++|..+.+..+.+.... .|.. .+..+..++++..+ +....+|.|.++|....+. +..+. .
T Consensus 263 ~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~--~ 340 (567)
T 1qks_A 263 YWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS--A 340 (567)
T ss_dssp EETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE--C
T ss_pred ccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee--c
Confidence 6 4899999988766555443321 1122 57788888876654 4445679999999876543 22333 3
Q ss_pred ccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEec-CCCCCCCCCCcccCCCceeEEeecCCccccCCCCEE-
Q 017194 146 SSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNF-GLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKIC- 223 (375)
Q Consensus 146 ~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l- 223 (375)
......+.|+|+++++++++..+++|.++|+.+++.+..+.. +. ..|+..-..+ ++| ++..+
T Consensus 341 ~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~---------~Phpg~g~~~-~~p------~~g~v~ 404 (567)
T 1qks_A 341 ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQ---------TPHPGRGANF-VHP------TFGPVW 404 (567)
T ss_dssp CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSS---------SBCCTTCEEE-EET------TTEEEE
T ss_pred cccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCc---------CCCCccceee-ECC------CCCcEE
Confidence 445678899999996666666789999999999988887775 31 1122212122 456 54444
Q ss_pred EEEe-cCCcEEEEeCCCc-------ceeecccccCCCCCCceeecccccceeeeee-------------eecCCc-----
Q 017194 224 VVAK-GDGVVDVINIESE-------LNISRSKSTTKPLKGSQSTSKVNIRDAEMEI-------------LDQSGG----- 277 (375)
Q Consensus 224 ~~~~-~dg~i~i~d~~~~-------~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~-------------~~~~~~----- 277 (375)
+++. .++.|.++|..+. +........ ......+..+|+++++..... ++....
T Consensus 405 ~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~-g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~ 483 (567)
T 1qks_A 405 ATSHMGDDSVALIGTDPEGHPDNAWKILDSFPAL-GGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGS 483 (567)
T ss_dssp EEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS-CSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSS
T ss_pred EeCCCCCCeEEEecCCCCCCccccCEEEEEEecC-CCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCccccccc
Confidence 4443 4689999999872 233332222 122344677899988776331 111111
Q ss_pred c-eeEeee-----eecCCCccEEEEEEeecCCCCcEEEEec-----CCCeEEEEeCCCcee
Q 017194 278 K-RLHLDY-----SVGGHTAAASCVAFSMFGERGKYLISGG-----NDKLVKVWDCSRFQG 327 (375)
Q Consensus 278 ~-~~~~~~-----~~~~~~~~v~~~~~s~~~~~~~~l~s~~-----~dg~i~iwd~~~~~~ 327 (375)
. ..+.+. .+..-...+..+.|+ ++|+++..+. .++.|.|+|.++.+.
T Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~ 541 (567)
T 1qks_A 484 DPEFKTLPIAEWAGITEGQPRVVQGEFN---KDGTEVWFSVWNGKDQESALVVVDDKTLEL 541 (567)
T ss_dssp CCCEEEECHHHHHTCCSSCCEEEEEEEC---TTSSEEEEEEECCTTSCCEEEEEETTTTEE
T ss_pred CCCcEEeccccccccCCCCcceEeeeEC---CCCCEEEEEeecCCCCCCcEEEEECCCceE
Confidence 0 001111 111124578899999 9998877652 379999999999854
No 194
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.77 E-value=3.7e-16 Score=126.36 Aligned_cols=238 Identities=8% Similarity=-0.025 Sum_probs=162.5
Q ss_pred cEEEEEEeCCCCeEE-EEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceee
Q 017194 60 PVTSLCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLY 138 (375)
Q Consensus 60 ~v~~l~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 138 (375)
...+++++++++.++ +...++.|.+|+..+.... .+. ..+...+.+++++++++++++.. ++.|.+||......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~-~~~--~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~- 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT-VLP--FNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ- 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----E-ECC--CCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccc-eEe--eCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-
Confidence 678899999998666 4467789999997653321 111 11235678899999998665555 88999999876543
Q ss_pred eeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccC
Q 017194 139 KSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDK 218 (375)
Q Consensus 139 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 218 (375)
..+.......+.++++.+++. ++++...++.|.+|+..+........ . ....+..+++++
T Consensus 100 ~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~~~~~-~------------~~~~p~~i~~~~------ 159 (270)
T 1rwi_B 100 TVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQTVLPF-T------------GLNDPDGVAVDN------ 159 (270)
T ss_dssp EECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSCEECCC-C------------SCCSCCCEEECT------
T ss_pred eeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCceeEeecc-c------------cCCCceeEEEeC------
Confidence 223212335789999999987 77777778899999765443322111 1 123567889988
Q ss_pred CCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEE
Q 017194 219 TNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAF 298 (375)
Q Consensus 219 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 298 (375)
+++++++...++.|.+||..+.... .....+...+..+++
T Consensus 160 ~g~l~v~~~~~~~i~~~~~~~~~~~----------------------------------------~~~~~~~~~p~~i~~ 199 (270)
T 1rwi_B 160 SGNVYVTDTDNNRVVKLEAESNNQV----------------------------------------VLPFTDITAPWGIAV 199 (270)
T ss_dssp TCCEEEEEGGGTEEEEECTTTCCEE----------------------------------------ECCCSSCCSEEEEEE
T ss_pred CCCEEEEECCCCEEEEEecCCCceE----------------------------------------eecccCCCCceEEEE
Confidence 7887777777889999998753211 011122256788999
Q ss_pred eecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 299 SMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 299 s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
+ ++|.++++...++.|.+|+...... ......+...+.++++.+ +|+++++...++.|+++++.
T Consensus 200 d---~~g~l~v~~~~~~~v~~~~~~~~~~---------~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 200 D---EAGTVYVTEHNTNQVVKLLAGSTTS---------TVLPFTGLNTPLAVAVDS-DRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp C---TTCCEEEEETTTSCEEEECTTCSCC---------EECCCCSCSCEEEEEECT-TCCEEEEEGGGTEEEEECCC
T ss_pred C---CCCCEEEEECCCCcEEEEcCCCCcc---------eeeccCCCCCceeEEECC-CCCEEEEECCCCEEEEEcCC
Confidence 9 8998888888889999999877521 111222335688999998 88888888899999999863
No 195
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.77 E-value=2.6e-14 Score=117.29 Aligned_cols=279 Identities=8% Similarity=-0.012 Sum_probs=190.4
Q ss_pred CCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceee-EeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCc
Q 017194 14 HKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQL-VTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPAS 92 (375)
Q Consensus 14 h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 92 (375)
....+.++++.++ +++.++...++.|.+||.. ++... .+..+...+..+++.++++..++...++.|..+|.. ++.
T Consensus 18 ~~~~p~~i~~d~~-g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 18 PDSGPYGITSSED-GKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp TTCCEEEEEECTT-SCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCcceeeECCC-CCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 4567899999998 7888877778899999987 55432 122234678999999999877776667899999987 432
Q ss_pred ccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeee-EecCcccceeEEEEeeCCCcEEEEeecCCeE
Q 017194 93 WRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKS-LRAGHSSICSSVQFIPWKPWEVISGGLDSKL 171 (375)
Q Consensus 93 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i 171 (375)
..+. .......+..+++.++++++++...++.|..+|.. ++.... +. .....+..+++.+++. ++++...++.|
T Consensus 95 -~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~-~~~~~~~~i~~d~~g~-l~v~~~~~~~i 169 (300)
T 2qc5_A 95 -TEYP-LPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLP-NKGSYPAFITLGSDNA-LWFTENQNNSI 169 (300)
T ss_dssp -EEEE-CSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECS-STTCCEEEEEECTTSS-EEEEETTTTEE
T ss_pred -EEec-CCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCC-CCCCCceeEEECCCCC-EEEEecCCCeE
Confidence 2221 11123568899999999887777668899999987 554422 22 3446789999999987 66766667899
Q ss_pred EEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCC
Q 017194 172 VMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTK 251 (375)
Q Consensus 172 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 251 (375)
..||. +++... +.... ....+..+++.+ ++.+.++....+.|.+||.. +...
T Consensus 170 ~~~~~-~g~~~~-~~~~~-----------~~~~~~~i~~d~------~g~l~v~~~~~~~i~~~~~~-g~~~-------- 221 (300)
T 2qc5_A 170 GRITN-TGKLEE-YPLPT-----------NAAAPVGITSGN------DGALWFVEIMGNKIGRITTT-GEIS-------- 221 (300)
T ss_dssp EEECT-TCCEEE-EECSS-----------TTCCEEEEEECT------TSSEEEEETTTTEEEEECTT-CCEE--------
T ss_pred EEECC-CCcEEE-eeCCC-----------CCCCcceEEECC------CCCEEEEccCCCEEEEEcCC-CcEE--------
Confidence 99998 554433 33210 124578899987 68777766667789999983 2110
Q ss_pred CCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeec
Q 017194 252 PLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTS 331 (375)
Q Consensus 252 ~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 331 (375)
. ..+..+...+.+++++ ++|++.++...++.|..|+.. ++..
T Consensus 222 -----------------------------~--~~~~~~~~~~~~i~~d---~~g~l~v~~~~~~~i~~~~~~-g~~~--- 263 (300)
T 2qc5_A 222 -----------------------------E--YDIPTPNARPHAITAG---KNSEIWFTEWGANQIGRITND-NTIQ--- 263 (300)
T ss_dssp -----------------------------E--EECSSTTCCEEEEEEC---STTCEEEEETTTTEEEEECTT-SCEE---
T ss_pred -----------------------------E--EECCCCCCCceEEEEC---CCCCEEEeccCCCeEEEECCC-CcEE---
Confidence 0 1122334567899999 899887777778999999984 3211
Q ss_pred chhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEec
Q 017194 332 INNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 332 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
..........+.++++.+ +|+++++.. . .|..++.
T Consensus 264 -----~~~~~~~~~~~~~i~~~~-~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 264 -----EYQLQTENAEPHGITFGK-DGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp -----EEECCSTTCCCCCEEECT-TSCEEEECS-S-EEEEEEE
T ss_pred -----EEECCccCCccceeEeCC-CCCEEEEcc-C-ceEEeCC
Confidence 001122345678888988 787655554 4 6766654
No 196
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.75 E-value=7.8e-15 Score=121.36 Aligned_cols=251 Identities=10% Similarity=0.070 Sum_probs=167.4
Q ss_pred eeeecCCCceeEEEEecCCCCEEEE-------eCCCCcEEEEecccCceeeEee----ecCccEEEEEEeCC-CCeEEEE
Q 017194 9 RRLRGHKATATCCIASRDRPGFVAS-------SGEDGCICWFDLRSKDVQLVTD----VGNGPVTSLCFKSG-NEDIIYV 76 (375)
Q Consensus 9 ~~l~~h~~~i~~~~~~~~~~~~l~s-------~~~d~~i~iw~~~~~~~~~~~~----~~~~~v~~l~~~~~-~~~l~~~ 76 (375)
..+...-....+++|+++ +.++++ +..++.|.+||..+++...... ++...+..++++++ ++.+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~-g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~ 89 (314)
T 1pjx_A 11 TKVTEDIPGAEGPVFDKN-GDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD 89 (314)
T ss_dssp EEEECCCTTCEEEEECTT-SCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE
T ss_pred hhhhccCCCccCceECCC-CCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE
Confidence 344545556789999988 777777 5677899999988777533221 14467899999999 7645444
Q ss_pred cCCCeEEEEECCCCCcccc-ccccc-CCCcceeEEEEcCCCCeEEEEeCC---------------CcEEEEeCcCceeee
Q 017194 77 SSGKEVKSFDVHMPASWRP-LESYN-YNKEEINQIVCNPKSSFLACADDG---------------GDVKIIDIRQHCLYK 139 (375)
Q Consensus 77 ~~d~~i~iwd~~~~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d---------------g~i~iwd~~~~~~~~ 139 (375)
..+.|.+||.+ ++.... ..... .....+.+++++++++++++...+ +.|..+|.. ++...
T Consensus 90 -~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~ 166 (314)
T 1pjx_A 90 -MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ 166 (314)
T ss_dssp -TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE
T ss_pred -CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE
Confidence 45589999987 543222 21111 112458899999999877776554 567778765 54433
Q ss_pred eEecCcccceeEEEEe----eCCCcEEEEeecCCeEEEeeCC-CCCcce--EEe-cCCCCCCCCCCcccCC-CceeEEee
Q 017194 140 SLRAGHSSICSSVQFI----PWKPWEVISGGLDSKLVMWDFS-KGRPNK--IVN-FGLPENNGNAGQCYNP-AFVHAIAI 210 (375)
Q Consensus 140 ~~~~~~~~~v~~~~~~----~~~~~~l~~~~~d~~i~~wd~~-~~~~~~--~~~-~~~~~~~~~~~~~~~~-~~v~~~~~ 210 (375)
... +......++++ |+++.++++...++.|.+||+. .++... .+. .. .+. ..+..+++
T Consensus 167 ~~~--~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~-----------~~~~~~p~~i~~ 233 (314)
T 1pjx_A 167 VDT--AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP-----------GTHEGGADGMDF 233 (314)
T ss_dssp EEE--EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC-----------CCSSCEEEEEEE
T ss_pred ecc--CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC-----------CCCCCCCCceEE
Confidence 332 34456889999 9986445555678999999986 343211 111 11 011 45678899
Q ss_pred cCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCC
Q 017194 211 PDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHT 290 (375)
Q Consensus 211 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (375)
++ +++++++...++.|.+||..+++. ...+..+.
T Consensus 234 d~------~G~l~v~~~~~~~i~~~d~~~g~~----------------------------------------~~~~~~~~ 267 (314)
T 1pjx_A 234 DE------DNNLLVANWGSSHIEVFGPDGGQP----------------------------------------KMRIRCPF 267 (314)
T ss_dssp BT------TCCEEEEEETTTEEEEECTTCBSC----------------------------------------SEEEECSS
T ss_pred CC------CCCEEEEEcCCCEEEEEcCCCCcE----------------------------------------eEEEeCCC
Confidence 88 788888877888999999875321 11223344
Q ss_pred ccEEEEEEeecCCCCc-EEEEecCCCeEEEEeCCCc
Q 017194 291 AAASCVAFSMFGERGK-YLISGGNDKLVKVWDCSRF 325 (375)
Q Consensus 291 ~~v~~~~~s~~~~~~~-~l~s~~~dg~i~iwd~~~~ 325 (375)
..+.+++++ ++++ ++++...++.|..|++...
T Consensus 268 ~~~~~i~~~---~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 268 EKPSNLHFK---PQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp SCEEEEEEC---TTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCceeEEEC---CCCCEEEEEeCCCCeEEEEeCCCC
Confidence 678999998 8998 4555666789999998753
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.74 E-value=2e-15 Score=121.82 Aligned_cols=223 Identities=13% Similarity=0.032 Sum_probs=155.7
Q ss_pred CCCeEEEEcCCCeEEEEECCCCCcccccccccCCC-cceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCc-c
Q 017194 69 GNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNK-EEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGH-S 146 (375)
Q Consensus 69 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~ 146 (375)
.++.|++++.++.|.+||.++++....+.. +. ..+.++.++|+|++++ +.++.|..||. +++.+..+. .+ .
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~---~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~-~~~~ 76 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPL---EKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIA-APAG 76 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEEC---CTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEE-CCTT
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCC---CccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEc-CCCC
Confidence 457899999999999999988765544433 23 4688999999999888 35678999998 899999998 44 3
Q ss_pred cceeEEEEeeCCCcEEEEeec-CCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEE
Q 017194 147 SICSSVQFIPWKPWEVISGGL-DSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVV 225 (375)
Q Consensus 147 ~~v~~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~ 225 (375)
..+.++.+.++|+ ++++.+. ++.|..+|. +++.+..+..... . .. .......+++.+ +++++++
T Consensus 77 ~~~~~~~~~~dG~-~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~-~---~~---~~~~~~~v~~~~------~G~~lv~ 141 (276)
T 3no2_A 77 CEMQTARILPDGN-ALVAWCGHPSTILEVNM-KGEVLSKTEFETG-I---ER---PHAQFRQINKNK------KGNYLVP 141 (276)
T ss_dssp CEEEEEEECTTSC-EEEEEESTTEEEEEECT-TSCEEEEEEECCS-C---SS---GGGSCSCCEECT------TSCEEEE
T ss_pred ccccccEECCCCC-EEEEecCCCCEEEEEeC-CCCEEEEEeccCC-C---Cc---ccccccCceECC------CCCEEEE
Confidence 5788999999998 6777776 788888885 6888887765310 0 00 011234455666 7999999
Q ss_pred EecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCC
Q 017194 226 AKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERG 305 (375)
Q Consensus 226 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~ 305 (375)
...++.|..||.. ++.. .++... ....++.+. ++|
T Consensus 142 ~~~~~~v~~~d~~-G~~~----------------------------------------w~~~~~-~~~~~~~~~---~~g 176 (276)
T 3no2_A 142 LFATSEVREIAPN-GQLL----------------------------------------NSVKLS-GTPFSSAFL---DNG 176 (276)
T ss_dssp ETTTTEEEEECTT-SCEE----------------------------------------EEEECS-SCCCEEEEC---TTS
T ss_pred ecCCCEEEEECCC-CCEE----------------------------------------EEEECC-CCccceeEc---CCC
Confidence 9999999999988 5322 223222 233455666 899
Q ss_pred cEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcc-cccceeeeeecCCCCCcEEEe
Q 017194 306 KYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNIN-LNKKVNWLCTTPTESENLVVC 363 (375)
Q Consensus 306 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~ 363 (375)
+++++++.++.|..+|..+++.......... .+ ....+..++..+ +|..+++.
T Consensus 177 ~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~----~~~~l~~~~~~~~~~-~G~i~v~~ 230 (276)
T 3no2_A 177 DCLVACGDAHCFVQLNLESNRIVRRVNANDI----EGVQLFFVAQLFPLQ-NGGLYICN 230 (276)
T ss_dssp CEEEECBTTSEEEEECTTTCCEEEEEEGGGS----BSCCCSEEEEEEECT-TSCEEEEE
T ss_pred CEEEEeCCCCeEEEEeCcCCcEEEEecCCCC----CCccccccccceEcC-CCCEEEEe
Confidence 9999999889999999998865432211110 00 112356666666 77766665
No 198
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.74 E-value=1.5e-15 Score=127.49 Aligned_cols=223 Identities=11% Similarity=0.012 Sum_probs=146.3
Q ss_pred CceeEEEEecCCCCEEEEeCCC---C--cEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCC-----------
Q 017194 16 ATATCCIASRDRPGFVASSGED---G--CICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSG----------- 79 (375)
Q Consensus 16 ~~i~~~~~~~~~~~~l~s~~~d---~--~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d----------- 79 (375)
..+.+++|+|| |+.||.++.+ + .|.+|++.+++....... .. +..++|+|+|+.|+.++.+
T Consensus 59 ~~~~~~~~SpD-g~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~ 135 (347)
T 2gop_A 59 ENATMPRISPD-GKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFED 135 (347)
T ss_dssp ESCEEEEECTT-SSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-SE-EEEEEECTTSSEEEEEEECCCC--------
T ss_pred ccCCCeEECCC-CCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-CC-ccceeECCCCCEEEEEEccCCCcCCcEEEc
Confidence 45788999999 8888877643 3 488888888776555444 34 9999999999999887632
Q ss_pred ----------------CeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCC-------cEEEEeCcCce
Q 017194 80 ----------------KEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGG-------DVKIIDIRQHC 136 (375)
Q Consensus 80 ----------------~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------~i~iwd~~~~~ 136 (375)
..|++||+.+++....+.. . .+..+.|+|++ +++++..++ ...+|.+.+++
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~----~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~ 209 (347)
T 2gop_A 136 DVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK----P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK 209 (347)
T ss_dssp -CCCC---------CEEEEEEEETTTTEEEEEEEE----E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE
T ss_pred ccceeecCcccccCccceEEEEECCCCeEEeeecC----C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc
Confidence 5799999987653233322 2 68889999999 777775542 34455444554
Q ss_pred eeeeEecCcccceeEEEEeeCCCcEEEEeecC--------CeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeE-
Q 017194 137 LYKSLRAGHSSICSSVQFIPWKPWEVISGGLD--------SKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHA- 207 (375)
Q Consensus 137 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~- 207 (375)
. ..+. .+ ..+..+ +|+|+. |+.++.+ ..|.+|| +++. ..+... +...+..
T Consensus 210 ~-~~l~-~~-~~~~~~--spdg~~-l~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~~------------~~~~~~~~ 268 (347)
T 2gop_A 210 E-EKMF-EK-VSFYAV--DSDGER-ILLYGKPEKKYMSEHNKLYIYD--GKEV-MGILDE------------VDRGVGQA 268 (347)
T ss_dssp E-EEEE-EE-ESEEEE--EECSSC-EEEEECCSSSCCCSSCEEEEEC--SSCE-EESSTT------------CCSEEEEE
T ss_pred e-EEec-cC-cceeeE--CCCCCE-EEEEEccccCCccccceEEEEC--CCce-Eecccc------------CCcccCCc
Confidence 4 3444 34 445544 999984 6555533 4688888 4432 222211 2345665
Q ss_pred EeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeec
Q 017194 208 IAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVG 287 (375)
Q Consensus 208 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~ 287 (375)
+.|+ ++ ++++++.++.+++| +.++. . ..+.
T Consensus 269 ~~~s-------dg-~~~~~~~~~~~~l~-~~~g~----------------------------------------~-~~~~ 298 (347)
T 2gop_A 269 KIKD-------GK-VYFTLFEEGSVNLY-IWDGE----------------------------------------I-KPIA 298 (347)
T ss_dssp EEET-------TE-EEEEEEETTEEEEE-EESSS----------------------------------------E-EEEE
T ss_pred cEEc-------Cc-EEEEEecCCcEEEE-EcCCc----------------------------------------e-EEEe
Confidence 7775 36 88999999999999 76321 0 1222
Q ss_pred CCCccEEEEEEeecCCCCcEEEEecCCCeE-EEEeCC
Q 017194 288 GHTAAASCVAFSMFGERGKYLISGGNDKLV-KVWDCS 323 (375)
Q Consensus 288 ~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i-~iwd~~ 323 (375)
.+...|.+++|+ | .++++++.++.. .+|.+.
T Consensus 299 ~~~~~v~~~~~s---~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 299 KGRHWIMGFDVD---E--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp CSSSEEEEEEES---S--SEEEEEECSSSCCEEEEES
T ss_pred cCCCeEEeeeee---C--cEEEEEcCCCChHHheEeC
Confidence 346778999999 7 577776666554 666655
No 199
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.73 E-value=3e-15 Score=126.57 Aligned_cols=267 Identities=13% Similarity=0.058 Sum_probs=179.2
Q ss_pred CcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEc----------CCCeEEEEECCCCCcccccccc-cC---CC
Q 017194 38 GCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVS----------SGKEVKSFDVHMPASWRPLESY-NY---NK 103 (375)
Q Consensus 38 ~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~----------~d~~i~iwd~~~~~~~~~~~~~-~~---~~ 103 (375)
+.|.++|..+++.+..+.....+ .+.++||+++++++. .++.|.++|..+.+....+..- .. ..
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 69999999999999999876666 899999999988876 3678999999987665544321 00 01
Q ss_pred cceeEEEEcCCCCeEEEEeC--CCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCc
Q 017194 104 EEINQIVCNPKSSFLACADD--GGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRP 181 (375)
Q Consensus 104 ~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~ 181 (375)
.....+.++||+++++++.. ++.|.+.|+.+++.+..+. .-. +....|+++..+++.+.||++.+.+..+++.
T Consensus 177 ~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~-v~g----~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v 251 (426)
T 3c75_H 177 TYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLD-VPD----CYHIFPASPTVFYMNCRDGSLARVDFADGET 251 (426)
T ss_dssp CCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE-CCS----EEEEEEEETTEEEEEETTSSEEEEECCTTCC
T ss_pred CCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEE-cCC----ceeeccCCCcEEEEEcCCCCEEEEECCCCcE
Confidence 23567899999999999874 5789999999999998887 321 1345566655778888899999999866655
Q ss_pred ceEE----ecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCce
Q 017194 182 NKIV----NFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQ 257 (375)
Q Consensus 182 ~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 257 (375)
.... ... .......+.+.+ ++..++..+..+.+.+.|...........
T Consensus 252 ~~~~~~~~~v~------------~~p~~~~~~~~~------dg~~~~~~s~~g~V~ViD~~~~~~~v~~~---------- 303 (426)
T 3c75_H 252 KVTNTEVFHTE------------DELLINHPAFSL------RSGRLVWPTYTGKIFQADLTAEGATFRAP---------- 303 (426)
T ss_dssp EEEECCCCSCT------------TSCBCSCCEECT------TTCEEEEEBTTSEEEEEEECSSCEEECCC----------
T ss_pred EEEeeeeeccC------------CCceeeEeeecC------CCCEEEEEeCCCcEEEEeccCCceEEeee----------
Confidence 4321 111 001112345566 67777777788999999987542211000
Q ss_pred eecccccceeeeeeeecCCcceeEeee----eecCCCccEEEEEEeecCCCCcEEEEecC----------CCeEEEEeCC
Q 017194 258 STSKVNIRDAEMEILDQSGGKRLHLDY----SVGGHTAAASCVAFSMFGERGKYLISGGN----------DKLVKVWDCS 323 (375)
Q Consensus 258 ~~s~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~~~~~~~l~s~~~----------dg~i~iwd~~ 323 (375)
..... ...........++++ |+++.++.... ++.|.+.|..
T Consensus 304 ----------------------~~~~~~~~i~~g~~p~g~~~va~s---~dg~rlyVa~~~~~~gthk~~s~~VsVID~~ 358 (426)
T 3c75_H 304 ----------------------IEALTEAERADDWRPGGWQQTAYH---RQSDRIYLLVDQRDEWKHKAASRFVVVLNAE 358 (426)
T ss_dssp ----------------------EESSCTTTGGGTEEECSSSCEEEE---GGGTEEEEEEEECCTTCTTSCEEEEEEEETT
T ss_pred ----------------------eeeccccccccccccCCceeeEEc---CCCCEEEEEecccccccccCCCCEEEEEECC
Confidence 00000 000001111235788 88876665532 4579999999
Q ss_pred CceeeeecchhhhhhhhcccccceeeeeecCCCCC-cEEEee-CCCeEEEEecC
Q 017194 324 RFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESE-NLVVCD-TSKVVKVYSIS 375 (375)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~-~dg~v~iw~~~ 375 (375)
+.+ .+..+. -......++|+| |++ +++++. .++.|.++|+.
T Consensus 359 T~k---------vv~~I~-vg~~P~gia~sp-Dg~~~lyv~n~~s~~VsVID~~ 401 (426)
T 3c75_H 359 TGE---------RINKIE-LGHEIDSINVSQ-DAEPLLYALSAGTQTLHIYDAA 401 (426)
T ss_dssp TCC---------EEEEEE-EEEEECEEEECC-SSSCEEEEEETTTTEEEEEETT
T ss_pred CCe---------EEEEEE-CCCCcCeEEEcc-CCCEEEEEEcCCCCeEEEEECC
Confidence 984 333332 223588999999 888 788877 58999999963
No 200
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.72 E-value=7.4e-15 Score=121.92 Aligned_cols=286 Identities=15% Similarity=0.073 Sum_probs=182.9
Q ss_pred EEEecCCCCEEEEeCC-----CCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEc----------CCCeEEEE
Q 017194 21 CIASRDRPGFVASSGE-----DGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVS----------SGKEVKSF 85 (375)
Q Consensus 21 ~~~~~~~~~~l~s~~~-----d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~----------~d~~i~iw 85 (375)
....|+ ++.++.... ++.|.+.|..+++.+..+.....+ . ++++|+|++++++. .++.|.+|
T Consensus 38 ~~~~pd-~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 38 EAPAPD-ARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCC-TTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eccCCC-CCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 455687 666666544 679999999999999999876666 4 99999999988775 35789999
Q ss_pred ECCCCCcccccccccC----CCcceeEEEEcCCCCeEEEEeC--CCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCC
Q 017194 86 DVHMPASWRPLESYNY----NKEEINQIVCNPKSSFLACADD--GGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKP 159 (375)
Q Consensus 86 d~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 159 (375)
|..+.+....+..-.+ .......+.|+|||++++++.. ++.|.++|+.+++.+.++. ... . ....|.+.
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~-v~g--~--~~~~P~g~ 189 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD-VPD--C--YHIFPTAP 189 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE-CCS--E--EEEEEEET
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE-CCC--c--ceeecCCC
Confidence 9998765555433210 0124567999999999998864 6899999999999999887 322 1 22335554
Q ss_pred cEEEEeecCCeEEEeeCCC-CCcceEEecCCCCCCCCCCcccCCCce-eEEeecCCccccCCCCEEEEEecCCcEEEEeC
Q 017194 160 WEVISGGLDSKLVMWDFSK-GRPNKIVNFGLPENNGNAGQCYNPAFV-HAIAIPDADMLDKTNKICVVAKGDGVVDVINI 237 (375)
Q Consensus 160 ~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 237 (375)
..+++.+.||++.+.++.. ++...... . .... ....+ ....|.+ ++|++++ .+.+|.+++.|+
T Consensus 190 ~~~~~~~~DG~~~~v~~~~~g~v~~~~~-~--~~~~------~~~~~~~~~~~~~-----~dG~~~~-vs~~g~V~v~d~ 254 (386)
T 3sjl_D 190 DTFFMHCRDGSLAKVAFGTEGTPEITHT-E--VFHP------EDEFLINHPAYSQ-----KAGRLVW-PTYTGKIHQIDL 254 (386)
T ss_dssp TEEEEEETTSCEEEEECCSSSCCEEEEC-C--CCSC------TTSCBCSCCEEET-----TTTEEEE-EBTTSEEEEEEC
T ss_pred ceeEEECCCCCEEEEECCCCCeEEEeec-c--eecc------ccccccccceeEc-----CCCcEEE-EeCCCEEEEEEC
Confidence 4678888999999999976 55432111 0 0000 00111 1124432 1676555 555899999999
Q ss_pred CCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeee----ecCCCccEEEEEEeecCCCCcEEEEecC
Q 017194 238 ESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYS----VGGHTAAASCVAFSMFGERGKYLISGGN 313 (375)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~s~~~~~~~~l~s~~~ 313 (375)
.+........ +..... ..-.......++++ ++++.+.....
T Consensus 255 ~~~~~~v~~~--------------------------------~~~~~~~~~~~g~~p~g~q~~a~~---~~~~~lyV~~~ 299 (386)
T 3sjl_D 255 SSGDAKFLPA--------------------------------VEALTEAERADGWRPGGWQQVAYH---RALDRIYLLVD 299 (386)
T ss_dssp TTSSCEECCC--------------------------------EESSCHHHHHTTEEECSSSCEEEE---TTTTEEEEEEE
T ss_pred CCCcceeecc--------------------------------eeccccccccccccCCCcceeeEC---CCCCeEEEEec
Confidence 7643211000 000000 00001222346667 78777766532
Q ss_pred ----------CCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCC-cEEEe-eCCCeEEEEecC
Q 017194 314 ----------DKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESE-NLVVC-DTSKVVKVYSIS 375 (375)
Q Consensus 314 ----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~-~~dg~v~iw~~~ 375 (375)
.+.|.+.|+.+.+ .+..+. -...+..+++++ |++ +|+++ ..++.|.++|..
T Consensus 300 ~~~~~~hk~~~~~V~viD~~t~k---------v~~~i~-vg~~~~~lavs~-D~~~~ly~tn~~~~~VsViD~~ 362 (386)
T 3sjl_D 300 QRDEWRHKTASRFVVVLDAKTGE---------RLAKFE-MGHEIDSINVSQ-DEKPLLYALSTGDKTLYIHDAE 362 (386)
T ss_dssp ECCTTCTTSCEEEEEEEETTTCC---------EEEEEE-EEEEECEEEECS-SSSCEEEEEETTTTEEEEEETT
T ss_pred cccccccCCCCCEEEEEECCCCe---------EEEEEE-CCCCcceEEECC-CCCeEEEEEcCCCCeEEEEECC
Confidence 3579999999984 332222 234788999999 876 56664 568999999863
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.72 E-value=3e-15 Score=138.25 Aligned_cols=245 Identities=12% Similarity=0.033 Sum_probs=160.9
Q ss_pred CCCceeEEEEecCCCCEEEEeCCC-----CcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCe-------
Q 017194 14 HKATATCCIASRDRPGFVASSGED-----GCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKE------- 81 (375)
Q Consensus 14 h~~~i~~~~~~~~~~~~l~s~~~d-----~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~------- 81 (375)
|...+..++|||| |++||.+..+ ..|++||+.+++.+.. ..+...+..++|+|| +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPD-G~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 161 GATALDAWAASDD-GRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp --EEEEEEEECTT-SSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred CCEEEEeEEECCC-CCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccc
Confidence 4446889999999 8888876543 4699999999987543 222223457899999 99988876543
Q ss_pred -------EEEEECCCCCcc-cccccccCCCcceeEEEEcCCCCeEEEEeCCC-----cEEEEeCcCc--eeeeeEecCcc
Q 017194 82 -------VKSFDVHMPASW-RPLESYNYNKEEINQIVCNPKSSFLACADDGG-----DVKIIDIRQH--CLYKSLRAGHS 146 (375)
Q Consensus 82 -------i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~--~~~~~~~~~~~ 146 (375)
|++|++.++... ..+.....+...+..+.|+|||++|+..+.++ .|++||+.++ +....+. .+.
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~ 316 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI-PDL 316 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE-CSS
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec-CCC
Confidence 899999876432 12222222333588999999999988877543 8999999876 3145555 455
Q ss_pred cceeEEEEeeCCCcEEEEeec----CCeEEEeeCCCCC-cceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCC
Q 017194 147 SICSSVQFIPWKPWEVISGGL----DSKLVMWDFSKGR-PNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNK 221 (375)
Q Consensus 147 ~~v~~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 221 (375)
..+... +.|+++ .|+..+. ++.|.+||+.++. ....+... +...+..+.+. ++.
T Consensus 317 ~~~~~~-~~~dg~-~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~------------~~~~l~~~~~~-------~~~ 375 (741)
T 1yr2_A 317 KAQWDF-VDGVGD-QLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPE------------SKDNLESVGIA-------GNR 375 (741)
T ss_dssp SSCEEE-EEEETT-EEEEEECTTCTTCEEEEEECSSSSCEEEEEECC------------CSSEEEEEEEE-------BTE
T ss_pred CceEEE-EeccCC-EEEEEECCCCCCCEEEEEeCCCCccccEEEecC------------CCCeEEEEEEE-------CCE
Confidence 455554 348888 4555554 4569999988752 33333322 23345666665 377
Q ss_pred EEEEEecCCcEEEEeCCC-cceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecC-CCccEEEEEEe
Q 017194 222 ICVVAKGDGVVDVINIES-ELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGG-HTAAASCVAFS 299 (375)
Q Consensus 222 ~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s 299 (375)
++++...++..++|.+.. +. ....+.. +...+..+.++
T Consensus 376 lv~~~~~dg~~~l~~~~~~g~----------------------------------------~~~~l~~~~~~~v~~~~~s 415 (741)
T 1yr2_A 376 LFASYIHDAKSQVLAFDLDGK----------------------------------------PAGAVSLPGIGSASGLSGR 415 (741)
T ss_dssp EEEEEEETTEEEEEEEETTSC----------------------------------------EEEECBCSSSCEEEEEECC
T ss_pred EEEEEEECCEEEEEEEeCCCC----------------------------------------ceeeccCCCCeEEEEeecC
Confidence 888888898877775541 11 1112322 25668888888
Q ss_pred ecCCCCcEEE----EecCCCeEEEEeCCCce
Q 017194 300 MFGERGKYLI----SGGNDKLVKVWDCSRFQ 326 (375)
Q Consensus 300 ~~~~~~~~l~----s~~~dg~i~iwd~~~~~ 326 (375)
|+++.|+ +....+.|++||+.+++
T Consensus 416 ---~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 416 ---PGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp ---BTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred ---CCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 7877665 33456889999998875
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.71 E-value=6.5e-15 Score=136.05 Aligned_cols=272 Identities=10% Similarity=0.005 Sum_probs=166.3
Q ss_pred ecCCCCEEEEeCCCC---cEEEEecc-----cCceeeEe------eecCccEEEEEEeCCCCeEEEEcCC-----CeEEE
Q 017194 24 SRDRPGFVASSGEDG---CICWFDLR-----SKDVQLVT------DVGNGPVTSLCFKSGNEDIIYVSSG-----KEVKS 84 (375)
Q Consensus 24 ~~~~~~~l~s~~~d~---~i~iw~~~-----~~~~~~~~------~~~~~~v~~l~~~~~~~~l~~~~~d-----~~i~i 84 (375)
+|+ |++++....++ .-.||... .++....+ .+|...+..++|+|||++|+.++.+ ..|++
T Consensus 115 ~pd-G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v 193 (741)
T 1yr2_A 115 QRR-GASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKF 193 (741)
T ss_dssp EEE-TTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEE
T ss_pred EEE-CCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEE
Confidence 477 67766554332 25555543 33332222 2233478899999999999887654 36999
Q ss_pred EECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCc--------------EEEEeCcCcee--eeeEec-Cccc
Q 017194 85 FDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGD--------------VKIIDIRQHCL--YKSLRA-GHSS 147 (375)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--------------i~iwd~~~~~~--~~~~~~-~~~~ 147 (375)
||+.+++.... .. +...+..++|+|| +.|+.+..++. |++|++.++.. ...+.. .+..
T Consensus 194 ~dl~tg~~~~~--~~--~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~ 268 (741)
T 1yr2_A 194 VGVADGKPLAD--EL--KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPK 268 (741)
T ss_dssp EETTTCCEEEE--EE--EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTT
T ss_pred EECCCCCCCCc--cC--CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCe
Confidence 99998765322 11 1223467899999 99888876554 89999876652 222220 2333
Q ss_pred ceeEEEEeeCCCcEEEEeecC-----CeEEEeeCCCC--CcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCC
Q 017194 148 ICSSVQFIPWKPWEVISGGLD-----SKLVMWDFSKG--RPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTN 220 (375)
Q Consensus 148 ~v~~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 220 (375)
.+..+.|+|+|++ |+..+.+ ..|++||+.++ +....+... ....... ++| ++
T Consensus 269 ~~~~~~~SpDG~~-l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~-------------~~~~~~~-~~~------dg 327 (741)
T 1yr2_A 269 RGHGASVSSDGRW-VVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD-------------LKAQWDF-VDG------VG 327 (741)
T ss_dssp CEEEEEECTTSCE-EEEEEECTTCSCCEEEEEEEETTEECCCEEEECS-------------SSSCEEE-EEE------ET
T ss_pred EEEEEEECCCCCE-EEEEEEccCCCcceEEEEECCCCCCcccEEecCC-------------CCceEEE-Eec------cC
Confidence 5889999999994 5555433 48999999876 314444422 2223333 235 68
Q ss_pred CEEEEEecC----CcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEE
Q 017194 221 KICVVAKGD----GVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCV 296 (375)
Q Consensus 221 ~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 296 (375)
+.|+..+.+ +.|.+||+.++. . .....+..+...+..+
T Consensus 328 ~~l~~~s~~~~~~~~l~~~d~~~~~------------------------------------~--~~~~l~~~~~~~l~~~ 369 (741)
T 1yr2_A 328 DQLWFVSGDGAPLKKIVRVDLSGST------------------------------------P--RFDTVVPESKDNLESV 369 (741)
T ss_dssp TEEEEEECTTCTTCEEEEEECSSSS------------------------------------C--EEEEEECCCSSEEEEE
T ss_pred CEEEEEECCCCCCCEEEEEeCCCCc------------------------------------c--ccEEEecCCCCeEEEE
Confidence 877777653 459999987531 0 1111223344456677
Q ss_pred EEeecCCCCcEEEEecCCCeEEEEeCC-Cceeeeecchhhhhhhhcc-cccceeeeeecCCCCCcEEE----eeCCCeEE
Q 017194 297 AFSMFGERGKYLISGGNDKLVKVWDCS-RFQGVQTSINNDLLIKNIN-LNKKVNWLCTTPTESENLVV----CDTSKVVK 370 (375)
Q Consensus 297 ~~s~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s----~~~dg~v~ 370 (375)
+++ ++.++++...|+..+||.+. ++. ....+.. ..+.+..+.++| +++.|+. ....++|+
T Consensus 370 ~~~----~~~lv~~~~~dg~~~l~~~~~~g~---------~~~~l~~~~~~~v~~~~~s~-d~~~l~~~~ss~~~P~~i~ 435 (741)
T 1yr2_A 370 GIA----GNRLFASYIHDAKSQVLAFDLDGK---------PAGAVSLPGIGSASGLSGRP-GDRHAYLSFSSFTQPATVL 435 (741)
T ss_dssp EEE----BTEEEEEEEETTEEEEEEEETTSC---------EEEECBCSSSCEEEEEECCB-TCSCEEEEEEETTEEEEEE
T ss_pred EEE----CCEEEEEEEECCEEEEEEEeCCCC---------ceeeccCCCCeEEEEeecCC-CCCEEEEEEcCCCCCCEEE
Confidence 776 56788888889987777654 231 1122222 356788899998 7776663 23457899
Q ss_pred EEec
Q 017194 371 VYSI 374 (375)
Q Consensus 371 iw~~ 374 (375)
+||+
T Consensus 436 ~~d~ 439 (741)
T 1yr2_A 436 ALDP 439 (741)
T ss_dssp EEET
T ss_pred EEEC
Confidence 9986
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.70 E-value=9.5e-14 Score=118.55 Aligned_cols=265 Identities=8% Similarity=-0.002 Sum_probs=167.4
Q ss_pred CceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCC--eEEEEECCCCCcc
Q 017194 16 ATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGK--EVKSFDVHMPASW 93 (375)
Q Consensus 16 ~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~ 93 (375)
.....|+|+++ ++++++...++.|++||..++........ ..... ++|+++++.|+++..++ .|.+++...+...
T Consensus 131 ~~P~~la~d~~-g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGN-NTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECST-TEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeCC-CCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 35778999998 78888888889999999987776554443 33334 99999999988888765 7888887754332
Q ss_pred cccccccC-CCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeee----EecCcccce-e-EEEEeeCCCcEEEEee
Q 017194 94 RPLESYNY-NKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKS----LRAGHSSIC-S-SVQFIPWKPWEVISGG 166 (375)
Q Consensus 94 ~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~----~~~~~~~~v-~-~~~~~~~~~~~l~~~~ 166 (375)
..+..... ....+.+++++|++..|+++..++.|+.||..++..... .. ++...- . .++|+|++..++++-.
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~-g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELS-GSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCC-SCCCCSSCCEEEEETTTTEEEEEET
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEeccccc-CCCCCCccccEEEeCCCCEEEEEeC
Confidence 22211111 345678899999655666677788999999987653222 11 222222 3 9999996554677777
Q ss_pred cCCeEEEeeCCCCCcceEEecCCCCCCCC---CCcccCCCceeEEeecCCccccCCCCEEEEEe-cCCcEEEEeCCCcce
Q 017194 167 LDSKLVMWDFSKGRPNKIVNFGLPENNGN---AGQCYNPAFVHAIAIPDADMLDKTNKICVVAK-GDGVVDVINIESELN 242 (375)
Q Consensus 167 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~ 242 (375)
.++.|+.|+.... ...+. +....... ......-.....++++| +++++++-. .++.|+.|++.++..
T Consensus 287 ~~~~I~~~~~~g~--~~~~~-g~~~~~g~~dg~~~~~~~~~P~gia~d~------dG~lyvad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 287 NLSSVYKITPDGE--CEWFC-GSATQKTVQDGLREEALFAQPNGMTVDE------DGNFYIVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp TTTEEEEECTTCC--EEEEE-ECTTCCSCBCEEGGGCBCSSEEEEEECT------TCCEEEEETTTTCEEEEEETTTTEE
T ss_pred CCCEEEEEecCCC--EEEEE-eCCCCCCcCCCcccccEeCCCeEEEEeC------CCCEEEEeCCCCCEEEEEECCCCEE
Confidence 8899999997643 22222 21100000 00000113478899988 788777777 789999999766432
Q ss_pred eecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeC
Q 017194 243 ISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDC 322 (375)
Q Consensus 243 ~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~ 322 (375)
........... ..+| ......-.....++++ ++|.++++-..++.|+.+++
T Consensus 358 ~~~~g~~~~~g------~~~g--------------------~~~~~~~~~P~giavd---~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 358 STVAGQVDVAS------QIDG--------------------TPLEATFNYPYDICYD---GEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEECTTCBS------CCCB--------------------STTTCCBSSEEEEEEC---SSSEEEEEESTTCEEEEEEE
T ss_pred EEEeCCCCCCC------cCCC--------------------ChhceEeCCceEEEEc---CCCCEEEEECCCCeEEEEEe
Confidence 21111000000 0000 0011113457899999 88988888888899988875
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.70 E-value=5.2e-14 Score=116.38 Aligned_cols=246 Identities=11% Similarity=0.057 Sum_probs=161.1
Q ss_pred cCccEEEEEEeCCCCeEEE-------EcCCCeEEEEECCCCCccccccc--ccCCCcceeEEEEcCC-CCeEEEEeCCCc
Q 017194 57 GNGPVTSLCFKSGNEDIIY-------VSSGKEVKSFDVHMPASWRPLES--YNYNKEEINQIVCNPK-SSFLACADDGGD 126 (375)
Q Consensus 57 ~~~~v~~l~~~~~~~~l~~-------~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~v~~~~~~~~-~~~l~~~~~dg~ 126 (375)
.-....+++|.++++.+++ ...++.|.+||..+++.. .+.. ..++...+..++++++ ++++++. ....
T Consensus 16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~ 93 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-VICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRLG 93 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEE-EEECCEETTEECCEEEEEECSSSSEEEEEE-TTTE
T ss_pred cCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-EEEecccCCCCCCCceEEEecCCCcEEEEE-CCCC
Confidence 3445678999999987776 466789999998766532 2111 0113456889999999 6544444 4457
Q ss_pred EEEEeCcCceeeee-Eec---CcccceeEEEEeeCCCcEEEEeecC---------------CeEEEeeCCCCCcceEEec
Q 017194 127 VKIIDIRQHCLYKS-LRA---GHSSICSSVQFIPWKPWEVISGGLD---------------SKLVMWDFSKGRPNKIVNF 187 (375)
Q Consensus 127 i~iwd~~~~~~~~~-~~~---~~~~~v~~~~~~~~~~~~l~~~~~d---------------~~i~~wd~~~~~~~~~~~~ 187 (375)
|.+||.+ ++.... ... .....+.++++.+++. ++++...+ +.|..||.. ++......
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~- 169 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT- 169 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE-
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc-
Confidence 9999987 655332 220 1124588999999997 56665544 567777765 44332222
Q ss_pred CCCCCCCCCCcccCCCceeEEeec----CCccccCCCCEEEEE-ecCCcEEEEeCC-CcceeecccccCCCCCCceeecc
Q 017194 188 GLPENNGNAGQCYNPAFVHAIAIP----DADMLDKTNKICVVA-KGDGVVDVINIE-SELNISRSKSTTKPLKGSQSTSK 261 (375)
Q Consensus 188 ~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~~~l~~~-~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~s~ 261 (375)
. ......++++ | +++.++++ ..++.|.+||.. ++...
T Consensus 170 ~-------------~~~~~~i~~~~~~d~------dg~~l~v~~~~~~~i~~~~~~~~g~~~------------------ 212 (314)
T 1pjx_A 170 A-------------FQFPNGIAVRHMNDG------RPYQLIVAETPTKKLWSYDIKGPAKIE------------------ 212 (314)
T ss_dssp E-------------ESSEEEEEEEECTTS------CEEEEEEEETTTTEEEEEEEEETTEEE------------------
T ss_pred C-------------CCCcceEEEecccCC------CCCEEEEEECCCCeEEEEECCCCCccc------------------
Confidence 1 2345788888 7 68666555 567899999976 22100
Q ss_pred cccceeeeeeeecCCcceeEeeeeecCCC-ccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhh
Q 017194 262 VNIRDAEMEILDQSGGKRLHLDYSVGGHT-AAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKN 340 (375)
Q Consensus 262 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 340 (375)
.......+..+. ..+..++++ ++|+++++...++.|.+||..++ +.+..+
T Consensus 213 -----------------~~~~~~~~~~~~~~~p~~i~~d---~~G~l~v~~~~~~~i~~~d~~~g---------~~~~~~ 263 (314)
T 1pjx_A 213 -----------------NKKVWGHIPGTHEGGADGMDFD---EDNNLLVANWGSSHIEVFGPDGG---------QPKMRI 263 (314)
T ss_dssp -----------------EEEEEEECCCCSSCEEEEEEEB---TTCCEEEEEETTTEEEEECTTCB---------SCSEEE
T ss_pred -----------------cceEEEECCCCCCCCCCceEEC---CCCCEEEEEcCCCEEEEEcCCCC---------cEeEEE
Confidence 011222344443 567889999 89998888877889999999866 333333
Q ss_pred cccccceeeeeecCCCCCcEE-EeeCCCeEEEEecC
Q 017194 341 INLNKKVNWLCTTPTESENLV-VCDTSKVVKVYSIS 375 (375)
Q Consensus 341 ~~~~~~v~~~~~~~~~~~~l~-s~~~dg~v~iw~~~ 375 (375)
..+...+.+++++| +++.|+ +...++.|..|+++
T Consensus 264 ~~~~~~~~~i~~~~-dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 264 RCPFEKPSNLHFKP-QTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp ECSSSCEEEEEECT-TSSEEEEEETTTTEEEEEECS
T ss_pred eCCCCCceeEEECC-CCCEEEEEeCCCCeEEEEeCC
Confidence 44557789999988 888454 45567889988863
No 205
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.69 E-value=3e-13 Score=110.90 Aligned_cols=240 Identities=5% Similarity=-0.035 Sum_probs=165.9
Q ss_pred cCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCce
Q 017194 57 GNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHC 136 (375)
Q Consensus 57 ~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 136 (375)
+...+.++++.++|+..++...++.|.+||.. ++. ..+. ...+...+..+++.+++.++++...++.|..||.. ++
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~ 88 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-TEYP-LPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI 88 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-EEEE-CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-EEec-CCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc
Confidence 45678999999999877776667899999987 432 2221 11234678899999999887777668889999986 33
Q ss_pred eeeeEec-CcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCcc
Q 017194 137 LYKSLRA-GHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADM 215 (375)
Q Consensus 137 ~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 215 (375)
. ..+.. .....+.++++.+++. ++++...++.|..||. +++.. .+.... ....+..+++.+
T Consensus 89 ~-~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~~~-~~~~~~-----------~~~~~~~i~~~~--- 150 (299)
T 2z2n_A 89 I-KEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD-DGKIR-EYELPN-----------KGSYPSFITLGS--- 150 (299)
T ss_dssp E-EEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCEE-EEECSS-----------TTCCEEEEEECT---
T ss_pred E-EEEeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECC-CCCEE-EecCCC-----------CCCCCceEEEcC---
Confidence 2 22320 2445789999999887 6777667889999998 55433 222110 134678999988
Q ss_pred ccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEE
Q 017194 216 LDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASC 295 (375)
Q Consensus 216 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 295 (375)
+++++++...++.|..||. +++.. . ..+......+..
T Consensus 151 ---~g~l~v~~~~~~~i~~~~~-~g~~~-------------------------------------~--~~~~~~~~~~~~ 187 (299)
T 2z2n_A 151 ---DNALWFTENQNNAIGRITE-SGDIT-------------------------------------E--FKIPTPASGPVG 187 (299)
T ss_dssp ---TSCEEEEETTTTEEEEECT-TCCEE-------------------------------------E--EECSSTTCCEEE
T ss_pred ---CCCEEEEeCCCCEEEEEcC-CCcEE-------------------------------------E--eeCCCCCCccee
Confidence 6887777777789999998 43211 0 012233456788
Q ss_pred EEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEec
Q 017194 296 VAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 296 ~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
++++ ++|++.++...++.|.+||. +++.. . .....+...+.++++.+ +|+.+++...++.|..|+.
T Consensus 188 i~~~---~~g~l~v~~~~~~~i~~~~~-~g~~~------~--~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 188 ITKG---NDDALWFVEIIGNKIGRITT-SGEIT------E--FKIPTPNARPHAITAGA-GIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp EEEC---TTSSEEEEETTTTEEEEECT-TCCEE------E--EECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEEET
T ss_pred EEEC---CCCCEEEEccCCceEEEECC-CCcEE------E--EECCCCCCCceeEEECC-CCCEEEeccCCceEEEECC
Confidence 9999 89988888777889999999 55321 0 01223446788999998 7876666657788988874
No 206
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.67 E-value=4.1e-13 Score=109.94 Aligned_cols=206 Identities=12% Similarity=0.141 Sum_probs=137.1
Q ss_pred eecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCC
Q 017194 11 LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMP 90 (375)
Q Consensus 11 l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~ 90 (375)
+..+..--.+..|+|+++.++++...++.|..||..+++. ..+. ....+.+++++++|+++++ . ++.|.+||.+++
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g 83 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQ 83 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTT
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCC
Confidence 3344455668899997577788888889999999987764 3333 4578999999999995544 4 578999999875
Q ss_pred Cccccccccc--CCCcceeEEEEcCCCCeEEEEeCC---------CcEEEEeCcC-ceeeeeEecCcccceeEEEEeeCC
Q 017194 91 ASWRPLESYN--YNKEEINQIVCNPKSSFLACADDG---------GDVKIIDIRQ-HCLYKSLRAGHSSICSSVQFIPWK 158 (375)
Q Consensus 91 ~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d---------g~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~ 158 (375)
+. ..+.... .....+..++++|+|+++++.... ..-.+|.+.. ++... +. ......+.++|+|++
T Consensus 84 ~~-~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~-~~~~~pngi~~spdg 160 (297)
T 3g4e_A 84 SA-VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YF-DQVDISNGLDWSLDH 160 (297)
T ss_dssp EE-EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EE-EEESBEEEEEECTTS
T ss_pred cE-EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-Ee-eccccccceEEcCCC
Confidence 43 2222211 113457899999999866654321 2234444432 33332 33 244567899999999
Q ss_pred CcEEEEeecCCeEEEeeC--CCCCcce--EE-ecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEE
Q 017194 159 PWEVISGGLDSKLVMWDF--SKGRPNK--IV-NFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVD 233 (375)
Q Consensus 159 ~~~l~~~~~d~~i~~wd~--~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 233 (375)
+.++++.+.++.|..||+ .++.... .+ .... ....+..+++.+ +|++.++....+.|.
T Consensus 161 ~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~-----------~~~~p~g~~~d~------~G~lwva~~~~~~v~ 223 (297)
T 3g4e_A 161 KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEK-----------EEQIPDGMCIDA------EGKLWVACYNGGRVI 223 (297)
T ss_dssp CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCG-----------GGCEEEEEEEBT------TSCEEEEEETTTEEE
T ss_pred CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCC-----------CCCCCCeeEECC------CCCEEEEEcCCCEEE
Confidence 855567777899999997 4554321 11 1110 124567889988 788777777788899
Q ss_pred EEeCCCc
Q 017194 234 VINIESE 240 (375)
Q Consensus 234 i~d~~~~ 240 (375)
.||..++
T Consensus 224 ~~d~~tG 230 (297)
T 3g4e_A 224 RLDPVTG 230 (297)
T ss_dssp EECTTTC
T ss_pred EEcCCCc
Confidence 9999864
No 207
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.66 E-value=1.2e-12 Score=110.14 Aligned_cols=257 Identities=10% Similarity=0.009 Sum_probs=164.1
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEEEeC----------CCCcEEEEecccCceeeEeeec-------CccEEEEEE
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSG----------EDGCICWFDLRSKDVQLVTDVG-------NGPVTSLCF 66 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~----------~d~~i~iw~~~~~~~~~~~~~~-------~~~v~~l~~ 66 (375)
+++.+.++..-..+ .++++|| +++++.+. .++.|.+||..+.+.+..+... ......+.|
T Consensus 56 t~~~~~~i~~g~~p--~i~~spD-g~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~ 132 (373)
T 2mad_H 56 SGSILGHVNGGFLP--NPVAAHS-GSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNAN 132 (373)
T ss_pred CCeEEEEecCCCCC--CeEECCC-CCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEE
Confidence 44455555543444 8999999 78877775 3678999999998887776532 123458999
Q ss_pred eCCCCeEEEEcC--CCeEEEEECCCCCcccc-cccccCCCcceeEEEEcCCC-CeEEEEeCCCcEEEEeCcCceeeeeEe
Q 017194 67 KSGNEDIIYVSS--GKEVKSFDVHMPASWRP-LESYNYNKEEINQIVCNPKS-SFLACADDGGDVKIIDIRQHCLYKSLR 142 (375)
Q Consensus 67 ~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~ 142 (375)
+|+|++|+++.. ++.|.++| .+++.... +.. .. ++.+.|++ +.+++.+.||.+.++|. +++......
T Consensus 133 spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~----~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~ 203 (373)
T 2mad_H 133 TPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS----PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGL 203 (373)
T ss_pred CCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC----Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEe
Confidence 999999998874 47899999 87755433 322 11 23445554 45666778999999999 776653321
Q ss_pred -----cCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCc--ceEEecCCCCCCCCCCcccCCCceeEEeecCCcc
Q 017194 143 -----AGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRP--NKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADM 215 (375)
Q Consensus 143 -----~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 215 (375)
.+.........+.+++.. ++..+..+.+.+.|+..... +..+..... ......+.+.....++++|
T Consensus 204 ~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~---~~~~~~~~p~g~~~~~~s~--- 276 (373)
T 2mad_H 204 VGAMLTAAQNLLTQPAQANKSGR-IVWPVYSGKILQADISAAGATNKAPIDALSG---GRKADTWRPGGWQQVAYLK--- 276 (373)
T ss_pred ccccccCCcceeecceeEecCCE-EEEEcCCceEEEEeccCCcceEeeeeeecCC---cccccceecCceEeEEECC---
Confidence 011111233566777663 34334678999999975532 222221100 0000111233345577887
Q ss_pred ccCCCCEEEEEec----------CCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeee
Q 017194 216 LDKTNKICVVAKG----------DGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYS 285 (375)
Q Consensus 216 ~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~ 285 (375)
+++.++++.. .+.|.++|+.+.+ .+.+
T Consensus 277 ---d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~----------------------------------------vv~~ 313 (373)
T 2mad_H 277 ---SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ----------------------------------------TSSQ 313 (373)
T ss_pred ---CCCEEEEEeccCCcccccCCCCeEEEEECCCCE----------------------------------------EEEE
Confidence 7887777653 3579999998753 2223
Q ss_pred ecCCCccEEEEEEeecCCCCc-EEEEec-CCCeEEEEeCCCce
Q 017194 286 VGGHTAAASCVAFSMFGERGK-YLISGG-NDKLVKVWDCSRFQ 326 (375)
Q Consensus 286 ~~~~~~~v~~~~~s~~~~~~~-~l~s~~-~dg~i~iwd~~~~~ 326 (375)
+.. ......++|+ |||+ +++++. .++.|.++|..+.+
T Consensus 314 i~~-g~~p~~i~~s---~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 314 ISL-GHDVDAISVA---QDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred EEC-CCCcCeEEEC---CCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 322 2357899999 9999 777777 58999999999984
No 208
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.65 E-value=3.9e-13 Score=114.78 Aligned_cols=267 Identities=9% Similarity=-0.005 Sum_probs=163.7
Q ss_pred ccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCC--cEEEEeCcCce
Q 017194 59 GPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGG--DVKIIDIRQHC 136 (375)
Q Consensus 59 ~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~ 136 (375)
.....|+|+++++.+++...++.|++||..++........ ..... ++|+++++.|+++..++ .|.+++...+.
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~----~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG----FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET----CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc----CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 3578999999999777777779999999986543322222 22233 89999999999888766 79999887655
Q ss_pred eeeeE---ecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEe-cCCCCCCCCCCcccCCCceeEEeecC
Q 017194 137 LYKSL---RAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVN-FGLPENNGNAGQCYNPAFVHAIAIPD 212 (375)
Q Consensus 137 ~~~~~---~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~ 212 (375)
....+ .......+.+++++|++. .|+.+..++.|+.||..++.. ..+. .... ... ...+...++|+|
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g-~lyv~d~~~~I~~~d~~~~~~-~~~~~~~~~---g~~----~~~P~~~ia~~p 276 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEE-WLYFVDSNKNFGRFNVKTQEV-TLIKQLELS---GSL----GTNPGPYLIYYF 276 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSS-EEEEECTTCEEEEEETTTCCE-EEEEECCCC---SCC----CCSSCCEEEEET
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCC-eEEEEECCCcEEEEECCCCCE-EEEeccccc---CCC----CCCccccEEEeC
Confidence 43333 102445678999999555 355577788999999987653 2221 0000 000 001113899998
Q ss_pred CccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCcc
Q 017194 213 ADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAA 292 (375)
Q Consensus 213 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (375)
. ++.++++-..++.|+.|+.........-.... .. ..+| ......-..
T Consensus 277 ~-----~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~-~g------~~dg--------------------~~~~~~~~~ 324 (409)
T 3hrp_A 277 V-----DSNFYMSDQNLSSVYKITPDGECEWFCGSATQ-KT------VQDG--------------------LREEALFAQ 324 (409)
T ss_dssp T-----TTEEEEEETTTTEEEEECTTCCEEEEEECTTC-CS------CBCE--------------------EGGGCBCSS
T ss_pred C-----CCEEEEEeCCCCEEEEEecCCCEEEEEeCCCC-CC------cCCC--------------------cccccEeCC
Confidence 3 35556666677899999876431110000000 00 0000 001111234
Q ss_pred EEEEEEeecCCCCcEEEEec-CCCeEEEEeCCCceeeeecchhhhhh-----hhcccccceeeeeecCCCCCcEEEeeCC
Q 017194 293 ASCVAFSMFGERGKYLISGG-NDKLVKVWDCSRFQGVQTSINNDLLI-----KNINLNKKVNWLCTTPTESENLVVCDTS 366 (375)
Q Consensus 293 v~~~~~s~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~l~s~~~d 366 (375)
...++++ ++|+++++-. .++.|+.|++.++............. .....-.....+++.+ ++.++++-..+
T Consensus 325 P~gia~d---~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~-~g~lyVad~~n 400 (409)
T 3hrp_A 325 PNGMTVD---EDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDG-EGGYWIAEAWG 400 (409)
T ss_dssp EEEEEEC---TTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECS-SSEEEEEESTT
T ss_pred CeEEEEe---CCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcC-CCCEEEEECCC
Confidence 7889999 9999888888 89999999987764321100000000 0001124578899999 78888887888
Q ss_pred CeEEEEecC
Q 017194 367 KVVKVYSIS 375 (375)
Q Consensus 367 g~v~iw~~~ 375 (375)
++|+.++++
T Consensus 401 ~~Ir~i~~e 409 (409)
T 3hrp_A 401 KAIRKYAVE 409 (409)
T ss_dssp CEEEEEEEC
T ss_pred CeEEEEEeC
Confidence 999998875
No 209
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.63 E-value=1.6e-13 Score=125.58 Aligned_cols=201 Identities=16% Similarity=0.089 Sum_probs=132.6
Q ss_pred cCCCceeEEEEecCCCCEEEE-----eCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCC-------
Q 017194 13 GHKATATCCIASRDRPGFVAS-----SGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGK------- 80 (375)
Q Consensus 13 ~h~~~i~~~~~~~~~~~~l~s-----~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~------- 80 (375)
+|...+..++|||| +++||. |+.+..|++||+.+++.+.. ..+......++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpD-g~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSRD-GRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECTT-SSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEECCC-CCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCccccccc
Confidence 35567889999999 888873 33346899999999986443 1111223578999 999999888773
Q ss_pred ------eEEEEECCCCCcc-cccccccC-CCcceeEEEEcCCCCeEEEEeC----CCcEEEEeCcCce-eeeeEecCccc
Q 017194 81 ------EVKSFDVHMPASW-RPLESYNY-NKEEINQIVCNPKSSFLACADD----GGDVKIIDIRQHC-LYKSLRAGHSS 147 (375)
Q Consensus 81 ------~i~iwd~~~~~~~-~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~-~~~~~~~~~~~ 147 (375)
.|++|++.++... ..+..... |...+..+.|+||+++|+.... ...|+++|+.++. ....+. .+..
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~-~~~~ 281 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQ-GDLD 281 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEE-CSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEe-CCCC
Confidence 4999999875432 22222222 3445778999999998865442 3589999998763 345555 5555
Q ss_pred ceeEEEEeeCCCcEEEEeecC---CeEEEeeCCCCCc--ceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCE
Q 017194 148 ICSSVQFIPWKPWEVISGGLD---SKLVMWDFSKGRP--NKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKI 222 (375)
Q Consensus 148 ~v~~~~~~~~~~~~l~~~~~d---~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 222 (375)
..... ++++++.+++....+ +.|..+|+.++.. ...+... ...+. .|++ +++.
T Consensus 282 ~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~-------------~~~~~--~~s~------~g~~ 339 (693)
T 3iuj_A 282 ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPE-------------RQQVL--TVHS------GSGY 339 (693)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC-------------CSSCE--EEEE------ETTE
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecC-------------CCCEE--EEEE------ECCE
Confidence 55554 667777555555443 6899999987654 2344322 22333 6777 5777
Q ss_pred EEEEec-CC--cEEEEeCCC
Q 017194 223 CVVAKG-DG--VVDVINIES 239 (375)
Q Consensus 223 l~~~~~-dg--~i~i~d~~~ 239 (375)
|+.... ++ .|++||+.+
T Consensus 340 lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 340 LFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp EEEEEEETTEEEEEEECTTS
T ss_pred EEEEEEECCeeEEEEEECCC
Confidence 766654 44 688888875
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.62 E-value=2.6e-12 Score=105.18 Aligned_cols=233 Identities=9% Similarity=0.003 Sum_probs=149.8
Q ss_pred cCccEEEEEEeCCCC-eEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCc
Q 017194 57 GNGPVTSLCFKSGNE-DIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQH 135 (375)
Q Consensus 57 ~~~~v~~l~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 135 (375)
+..-..+..|++++. .+++...++.|..||..+++. ..+. ....+.+++++++++++++ . +..|.+||.+++
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~----~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g 83 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT----MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQ 83 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE----CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTT
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe----CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCC
Confidence 344556889999654 555566678999999986543 2221 2467899999999985554 3 567999999877
Q ss_pred eeeeeEec---CcccceeEEEEeeCCCcEEEEeecC---------CeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCC
Q 017194 136 CLYKSLRA---GHSSICSSVQFIPWKPWEVISGGLD---------SKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPA 203 (375)
Q Consensus 136 ~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~d---------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (375)
+....... .....++.++++|+|. ++++.... ..-.+|.+........+... ..
T Consensus 84 ~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~-------------~~ 149 (297)
T 3g4e_A 84 SAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQ-------------VD 149 (297)
T ss_dssp EEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEE-------------ES
T ss_pred cEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCCEEEEeec-------------cc
Confidence 65433320 0124578999999998 55544221 22344444322222222211 24
Q ss_pred ceeEEeecCCccccCCCCEEEE-EecCCcEEEEeCC--CcceeecccccCCCCCCceeecccccceeeeeeeecCCccee
Q 017194 204 FVHAIAIPDADMLDKTNKICVV-AKGDGVVDVINIE--SELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRL 280 (375)
Q Consensus 204 ~v~~~~~~~~~~~~~~~~~l~~-~~~dg~i~i~d~~--~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~ 280 (375)
..+.++|+| +++.|++ .+.++.|.+|++. ++... ..
T Consensus 150 ~pngi~~sp------dg~~lyv~~~~~~~i~~~~~d~~~G~~~-----------------------------------~~ 188 (297)
T 3g4e_A 150 ISNGLDWSL------DHKIFYYIDSLSYSVDAFDYDLQTGQIS-----------------------------------NR 188 (297)
T ss_dssp BEEEEEECT------TSCEEEEEEGGGTEEEEEEECTTTCCEE-----------------------------------EE
T ss_pred cccceEEcC------CCCEEEEecCCCCcEEEEeccCCCCccc-----------------------------------Cc
Confidence 568899999 7876654 4567899999874 32110 01
Q ss_pred EeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeec-CCCCCc
Q 017194 281 HLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTT-PTESEN 359 (375)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~ 359 (375)
+.+..+..+......++++ ++|++.++...++.|.+||..++ +++..+..+...+++++|. | +++.
T Consensus 189 ~~~~~~~~~~~~p~g~~~d---~~G~lwva~~~~~~v~~~d~~tG---------~~~~~i~~p~~~~t~~~f~g~-d~~~ 255 (297)
T 3g4e_A 189 RSVYKLEKEEQIPDGMCID---AEGKLWVACYNGGRVIRLDPVTG---------KRLQTVKLPVDKTTSCCFGGK-NYSE 255 (297)
T ss_dssp EEEEECCGGGCEEEEEEEB---TTSCEEEEEETTTEEEEECTTTC---------CEEEEEECSSSBEEEEEEESG-GGCE
T ss_pred EEEEECCCCCCCCCeeEEC---CCCCEEEEEcCCCEEEEEcCCCc---------eEEEEEECCCCCceEEEEeCC-CCCE
Confidence 2223333344567889999 89988888877889999999877 4444445555779999998 5 7666
Q ss_pred EEEee
Q 017194 360 LVVCD 364 (375)
Q Consensus 360 l~s~~ 364 (375)
|+.++
T Consensus 256 L~vt~ 260 (297)
T 3g4e_A 256 MYVTC 260 (297)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 65544
No 211
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.61 E-value=1.3e-12 Score=107.32 Aligned_cols=207 Identities=8% Similarity=-0.023 Sum_probs=135.1
Q ss_pred CCCeeeecCCCceeEEEEecCCCC-EEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEE
Q 017194 6 AKPRRLRGHKATATCCIASRDRPG-FVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKS 84 (375)
Q Consensus 6 ~~~~~l~~h~~~i~~~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~i 84 (375)
..+..+..+........|+|+ ++ ++++...++.|..|+. +++ ...+..+...+..++++++|+.+++...++.|.+
T Consensus 35 ~~~~~l~~~~~~~egp~~~~~-g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~ 111 (305)
T 3dr2_A 35 ARLLTLYDQATWSEGPAWWEA-QRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITR 111 (305)
T ss_dssp CCCEEEECCCSSEEEEEEEGG-GTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred CceEEEecCCcCccCCeEeCC-CCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEE
Confidence 455667666777889999999 56 7788888899999997 454 4555556778999999999986666556688999
Q ss_pred EECCCCCcccccccccC-CCcceeEEEEcCCCCeEEE----EeC-------------CCcEEEEeCcCceeeeeEecCcc
Q 017194 85 FDVHMPASWRPLESYNY-NKEEINQIVCNPKSSFLAC----ADD-------------GGDVKIIDIRQHCLYKSLRAGHS 146 (375)
Q Consensus 85 wd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~~~~~~~~ 146 (375)
|+.. ++.........+ ....+..+++.++|+++++ |.. .+.|..+|..+++...... .
T Consensus 112 ~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~---~ 187 (305)
T 3dr2_A 112 SDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMAD---L 187 (305)
T ss_dssp ECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEE---E
T ss_pred ECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEec---C
Confidence 9976 432221111111 1234678999999987775 332 2568888876665433222 2
Q ss_pred cceeEEEEeeCCCcEEEEeecC------CeEEEeeCCCCCcceEEe-cCCCCCCCCCCcccCCCceeEEeecCCccccCC
Q 017194 147 SICSSVQFIPWKPWEVISGGLD------SKLVMWDFSKGRPNKIVN-FGLPENNGNAGQCYNPAFVHAIAIPDADMLDKT 219 (375)
Q Consensus 147 ~~v~~~~~~~~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 219 (375)
.....++|+|+++ .|+.+... +.|..||+..+. +.... +.. ........+++.+ +
T Consensus 188 ~~p~gl~~spdg~-~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~----------~~~~~pdgi~~d~------~ 249 (305)
T 3dr2_A 188 DHPNGLAFSPDEQ-TLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFAS----------VPDGLPDGFCVDR------G 249 (305)
T ss_dssp SSEEEEEECTTSS-EEEEEECCC---CCCEEEEEEEETTE-EEEEEEEEC----------CSSSCCCSEEECT------T
T ss_pred CCCcceEEcCCCC-EEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEE----------CCCCCCCeEEECC------C
Confidence 3567899999998 45555444 789999987654 22111 000 0123345677777 6
Q ss_pred CCEEEEEecCCcEEEEeCCC
Q 017194 220 NKICVVAKGDGVVDVINIES 239 (375)
Q Consensus 220 ~~~l~~~~~dg~i~i~d~~~ 239 (375)
|+ |.+++.+ .|.+|+...
T Consensus 250 G~-lwv~~~~-gv~~~~~~g 267 (305)
T 3dr2_A 250 GW-LWSSSGT-GVCVFDSDG 267 (305)
T ss_dssp SC-EEECCSS-EEEEECTTS
T ss_pred CC-EEEecCC-cEEEECCCC
Confidence 87 4444444 488998853
No 212
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.61 E-value=7.6e-12 Score=102.53 Aligned_cols=240 Identities=6% Similarity=-0.038 Sum_probs=164.0
Q ss_pred cCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCce
Q 017194 57 GNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHC 136 (375)
Q Consensus 57 ~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 136 (375)
....+.++++.++|+..++...++.|.+||.. ++. ..+. ...+...+..+++.++++++++...++.|..+|.. ++
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~-~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRI-KEFE-VPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEE-CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-Cce-EEEE-CCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC
Confidence 35678899999999877777778999999987 432 2221 12223578899999999877777667889999987 55
Q ss_pred eeeeEe-cCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCcc
Q 017194 137 LYKSLR-AGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADM 215 (375)
Q Consensus 137 ~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 215 (375)
.. .+. ......+.++++.+++. ++++...++.|..||.. ++.. .+.... ....+..+++.+
T Consensus 94 ~~-~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~-~~~~~~-----------~~~~~~~i~~d~--- 155 (300)
T 2qc5_A 94 FT-EYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GTIY-EYDLPN-----------KGSYPAFITLGS--- 155 (300)
T ss_dssp EE-EEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCEE-EEECSS-----------TTCCEEEEEECT---
T ss_pred eE-EecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CCEE-EccCCC-----------CCCCceeEEECC---
Confidence 43 332 02346789999999887 66766668899999987 5443 332210 124678899988
Q ss_pred ccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEE
Q 017194 216 LDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASC 295 (375)
Q Consensus 216 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 295 (375)
++++.++...++.|..||.. +... . .....+...+..
T Consensus 156 ---~g~l~v~~~~~~~i~~~~~~-g~~~-------------------------------------~--~~~~~~~~~~~~ 192 (300)
T 2qc5_A 156 ---DNALWFTENQNNSIGRITNT-GKLE-------------------------------------E--YPLPTNAAAPVG 192 (300)
T ss_dssp ---TSSEEEEETTTTEEEEECTT-CCEE-------------------------------------E--EECSSTTCCEEE
T ss_pred ---CCCEEEEecCCCeEEEECCC-CcEE-------------------------------------E--eeCCCCCCCcce
Confidence 68866666667889999883 2111 0 112233456788
Q ss_pred EEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEec
Q 017194 296 VAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 296 ~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
++++ ++|.+.++....+.|.+|+. +++... .........+.++++.+ +|++.++...++.|..|+.
T Consensus 193 i~~d---~~g~l~v~~~~~~~i~~~~~-~g~~~~--------~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 193 ITSG---NDGALWFVEIMGNKIGRITT-TGEISE--------YDIPTPNARPHAITAGK-NSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp EEEC---TTSSEEEEETTTTEEEEECT-TCCEEE--------EECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECT
T ss_pred EEEC---CCCCEEEEccCCCEEEEEcC-CCcEEE--------EECCCCCCCceEEEECC-CCCEEEeccCCCeEEEECC
Confidence 9998 89988887777888999998 332110 01123345678899988 7876666656788888864
No 213
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.60 E-value=3.9e-12 Score=105.51 Aligned_cols=196 Identities=12% Similarity=-0.027 Sum_probs=130.6
Q ss_pred ceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCccccc
Q 017194 17 TATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPL 96 (375)
Q Consensus 17 ~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 96 (375)
-..+..|+|+++.++++...++.|..||..+++. ..+. ....+.+++|+++++++++. +..|.+||..+++.. .+
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~~~-~~ 124 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRK-TVHA-LPFMGSALAKISDSKQLIAS--DDGLFLRDTATGVLT-LH 124 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEEE-CSSCEEEEEEEETTEEEEEE--TTEEEEEETTTCCEE-EE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEE-CCCcceEEEEeCCCeEEEEE--CCCEEEEECCCCcEE-EE
Confidence 3567899998566777777788999999987754 3333 35679999999999877654 345999998876532 22
Q ss_pred cccc--CCCcceeEEEEcCCCCeEEEEeC------CCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecC
Q 017194 97 ESYN--YNKEEINQIVCNPKSSFLACADD------GGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLD 168 (375)
Q Consensus 97 ~~~~--~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 168 (375)
.... .....+..++++|+|+++++... .+.|..++ +++.. .+. ........++|+|+++.++++.+.+
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~-~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLF-ADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEE-EEESSEEEEEECTTSCEEEEEETTT
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-Eee-CCCcccCCeEEcCCCCEEEEEECCC
Confidence 2211 11246889999999987665432 24566666 45443 333 2334578999999998445555667
Q ss_pred CeEEEeeCC--CC-Ccc--eEEe-cCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCC
Q 017194 169 SKLVMWDFS--KG-RPN--KIVN-FGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIE 238 (375)
Q Consensus 169 ~~i~~wd~~--~~-~~~--~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 238 (375)
+.|.+||+. ++ +.. ..+. ... ....+..+++.+ ++.+.++...++.|..||..
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~-----------~~~~p~gi~~d~------~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTG-----------IKGGMDGSVCDA------EGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTT-----------SSSEEEEEEECT------TSCEEEEEETTTEEEEECTT
T ss_pred CEEEEEEcccccCCcccCceEEEECCC-----------CCCCCCeeEECC------CCCEEEEEeCCCEEEEECCC
Confidence 899999986 55 321 1221 110 123467788877 68877776667889999884
No 214
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.60 E-value=4.3e-13 Score=111.40 Aligned_cols=258 Identities=11% Similarity=0.050 Sum_probs=162.7
Q ss_pred CCCCCeeeecCCCceeEEEEecCCCCEEEEeC----------CCCcEEEEecccCceeeEeeecC-------ccEEEEEE
Q 017194 4 AEAKPRRLRGHKATATCCIASRDRPGFVASSG----------EDGCICWFDLRSKDVQLVTDVGN-------GPVTSLCF 66 (375)
Q Consensus 4 ~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~----------~d~~i~iw~~~~~~~~~~~~~~~-------~~v~~l~~ 66 (375)
+.+.+.++..-..+ . ++++|| +++++++. .++.|.+||..+++.+..+.... .....++|
T Consensus 68 t~~v~~~I~vG~~P-~-va~spD-G~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~ 144 (386)
T 3sjl_D 68 AGRVIGMIDGGFLP-N-PVVADD-GSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSL 144 (386)
T ss_dssp TTEEEEEEEECSSC-E-EEECTT-SSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEE
T ss_pred CCeEEEEEECCCCC-c-EEECCC-CCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEE
Confidence 45556666654555 4 999999 77766654 35789999999999988876432 24567999
Q ss_pred eCCCCeEEEEcC--CCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcC-ceeeeeEec
Q 017194 67 KSGNEDIIYVSS--GKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQ-HCLYKSLRA 143 (375)
Q Consensus 67 ~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~ 143 (375)
+|||++++++.. ++.|.++|+.+.+....+.. .+ . ...+....+.+++.+.||.+.+.++.+ ++......
T Consensus 145 spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v----~g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~- 217 (386)
T 3sjl_D 145 TPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV----PD-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHT- 217 (386)
T ss_dssp CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC----CS-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEEC-
T ss_pred cCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC----CC-c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeec-
Confidence 999999888864 68999999998765555532 11 1 122333445677778888888888875 55432111
Q ss_pred Cc----ccce-eEEEEe-eCCCcEEEEeecCCeEEEeeCCCCC--cceEEecCCCCCCCCCCcccCCCceeEEeecCCcc
Q 017194 144 GH----SSIC-SSVQFI-PWKPWEVISGGLDSKLVMWDFSKGR--PNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADM 215 (375)
Q Consensus 144 ~~----~~~v-~~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 215 (375)
.+ ..++ ....|. ++|+ ++..+.+|+|++.|+.... ....+..... .....-+.+.....++++|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~dG~--~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~---~~~~~g~~p~g~q~~a~~~--- 289 (386)
T 3sjl_D 218 EVFHPEDEFLINHPAYSQKAGR--LVWPTYTGKIHQIDLSSGDAKFLPAVEALTE---AERADGWRPGGWQQVAYHR--- 289 (386)
T ss_dssp CCCSCTTSCBCSCCEEETTTTE--EEEEBTTSEEEEEECTTSSCEECCCEESSCH---HHHHTTEEECSSSCEEEET---
T ss_pred ceeccccccccccceeEcCCCc--EEEEeCCCEEEEEECCCCcceeecceecccc---ccccccccCCCcceeeECC---
Confidence 11 1122 124665 5664 4445668999999997654 2333321000 0000001123344577777
Q ss_pred ccCCCCEEEEEec----------CCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeee
Q 017194 216 LDKTNKICVVAKG----------DGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYS 285 (375)
Q Consensus 216 ~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~ 285 (375)
+++.+++... .+.|.++|+.+.+.. ..
T Consensus 290 ---~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~----------------------------------------~~ 326 (386)
T 3sjl_D 290 ---ALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL----------------------------------------AK 326 (386)
T ss_dssp ---TTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE----------------------------------------EE
T ss_pred ---CCCeEEEEeccccccccCCCCCEEEEEECCCCeEE----------------------------------------EE
Confidence 6777777653 257999999985432 12
Q ss_pred ecCCCccEEEEEEeecCCCCc-EEEE-ecCCCeEEEEeCCCce
Q 017194 286 VGGHTAAASCVAFSMFGERGK-YLIS-GGNDKLVKVWDCSRFQ 326 (375)
Q Consensus 286 ~~~~~~~v~~~~~s~~~~~~~-~l~s-~~~dg~i~iwd~~~~~ 326 (375)
+.. ...+..++++ +|++ +|++ ...++.|.++|..+++
T Consensus 327 i~v-g~~~~~lavs---~D~~~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 327 FEM-GHEIDSINVS---QDEKPLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp EEE-EEEECEEEEC---SSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred EEC-CCCcceEEEC---CCCCeEEEEEcCCCCeEEEEECCCCc
Confidence 211 2367899999 8986 5555 4568999999999984
No 215
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.59 E-value=1.2e-13 Score=115.61 Aligned_cols=280 Identities=9% Similarity=0.006 Sum_probs=169.2
Q ss_pred CCeeeecCCCceeEEEEecCCCCEEEEeC--CCCcEEEEecccCceeeEe-------eecCccEEEEEEeCCCCeEEEEc
Q 017194 7 KPRRLRGHKATATCCIASRDRPGFVASSG--EDGCICWFDLRSKDVQLVT-------DVGNGPVTSLCFKSGNEDIIYVS 77 (375)
Q Consensus 7 ~~~~l~~h~~~i~~~~~~~~~~~~l~s~~--~d~~i~iw~~~~~~~~~~~-------~~~~~~v~~l~~~~~~~~l~~~~ 77 (375)
.++.+.........++++|+ ++++++.. .++.++||.+.+++. ..+ ..+-..+..+++.++++++++-.
T Consensus 8 ~~~~v~~~~~~p~~va~~~~-g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~ 85 (343)
T 2qe8_A 8 RLEVVAELSLAPGNITLTPD-GRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDN 85 (343)
T ss_dssp CCEEEEEESSCEEEEEECTT-SCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEEC
T ss_pred eeEEEEEcCCCcceEEECCC-CCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcC
Confidence 44555444478899999998 88888863 234356666654543 222 12446799999999987665543
Q ss_pred C-----CCeEEEEECCCCCccccccc---ccCCCcceeEEEEcCCCCeEE-EEe---CCCcEEEEeCcCceeeeeEecCc
Q 017194 78 S-----GKEVKSFDVHMPASWRPLES---YNYNKEEINQIVCNPKSSFLA-CAD---DGGDVKIIDIRQHCLYKSLRAGH 145 (375)
Q Consensus 78 ~-----d~~i~iwd~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~-~~~---~dg~i~iwd~~~~~~~~~~~~~~ 145 (375)
. ++.|.+||+.+++....+.. ...+...+..+++++++..++ +.. .++.|.+||+.+++..+.+. +|
T Consensus 86 g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~-~~ 164 (343)
T 2qe8_A 86 GNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQ-GY 164 (343)
T ss_dssp HHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECT-TC
T ss_pred CCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEec-CC
Confidence 3 57999999987764333321 112234568999998655554 444 57899999998888766655 44
Q ss_pred cccee-EEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEE
Q 017194 146 SSICS-SVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICV 224 (375)
Q Consensus 146 ~~~v~-~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~ 224 (375)
..... ...+.+++. .+.+...++.++.|. ..+..|+++| +++.|+
T Consensus 165 ~~~~~~~~~~~~~g~-~~~~~~~~g~~~~~~---------------------------~~~~gia~s~------dg~~ly 210 (343)
T 2qe8_A 165 PGIAPEDIDLVIDGV-PVQIGQPDGTVIRPH---------------------------LGVNGIVLDA------ENEWLY 210 (343)
T ss_dssp TTTSCCSCCCEETTE-ECBEECTTSCEECCC---------------------------CCEEEEEECT------TSCEEE
T ss_pred CcccccccceeECCE-EEEeccCCCceecee---------------------------cccceeEecc------CCCEEE
Confidence 22111 134555665 466666677665442 2357799999 798888
Q ss_pred EEecCC-cEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCC
Q 017194 225 VAKGDG-VVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGE 303 (375)
Q Consensus 225 ~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 303 (375)
++...+ .+..++....... .. .+++. ...+ ...++......++++ +
T Consensus 211 ~~~~~~~~l~~~~~~~~~~~-~~--------------~~~~~--------------~~~~-~~~g~~g~pdgia~d---~ 257 (343)
T 2qe8_A 211 LSPMHSTSMYRIKSADLSNL-QL--------------TDAEL--------------GSKI-ERYSEKPICDGISID---K 257 (343)
T ss_dssp EEESSCSEEEEEEHHHHTCT-TC--------------CHHHH--------------HTTC-EEEEECCSCSCEEEC---T
T ss_pred EEeCCCCeEEEEEHHHhcCC-CC--------------Chhhh--------------hcce-EecccCCCCceEEEC---C
Confidence 887665 4444443210000 00 00000 0000 111222345668898 8
Q ss_pred CCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeC
Q 017194 304 RGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDT 365 (375)
Q Consensus 304 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 365 (375)
+|.++++...++.|.+||..+++.. .+.. ..+...+.++++.+ +++++++.+.
T Consensus 258 ~G~l~va~~~~~~V~~~d~~~G~~~-------~~~~-~~~~~~p~~va~~~-~g~l~v~~~~ 310 (343)
T 2qe8_A 258 DHNIYVGDLAHSAIGVITSADRAYK-------LLVT-DEKLSWTDSFNFGS-DGYLYFDCNQ 310 (343)
T ss_dssp TCCEEEEEGGGTEEEEEETTTTEEE-------EEEE-CGGGSCEEEEEECT-TSCEEEEECC
T ss_pred CCCEEEEccCCCeEEEEECCCCCEE-------EEEE-CCceecCCeeEECC-CCcEEEEeCc
Confidence 9999999999999999998555321 1111 11245688999998 7877777653
No 216
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.58 E-value=2.8e-13 Score=112.74 Aligned_cols=271 Identities=10% Similarity=-0.085 Sum_probs=168.2
Q ss_pred CEEEEeCCCC----cEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEc----------CCCeEEEEECCCCCccc
Q 017194 29 GFVASSGEDG----CICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVS----------SGKEVKSFDVHMPASWR 94 (375)
Q Consensus 29 ~~l~s~~~d~----~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~----------~d~~i~iwd~~~~~~~~ 94 (375)
+.+++...++ +|.++|..+++.+.++.....+ .+.++|++++++++. .++.|.+||+.+.+...
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred eEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence 3444444444 7889999999999999876666 799999999998886 36789999999877665
Q ss_pred ccccccCC----CcceeEEEEcCCCCeEEEEeC--CCcEEE--EeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEee
Q 017194 95 PLESYNYN----KEEINQIVCNPKSSFLACADD--GGDVKI--IDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGG 166 (375)
Q Consensus 95 ~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~--dg~i~i--wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 166 (375)
.+..-... ......++++||+++++++.. +..+.+ +|+.+ +..+. . ... ..+.|+++..+++.+
T Consensus 111 ~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~-v-~~~---~~~~p~g~~~~~~~~ 182 (368)
T 1mda_H 111 DIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTK-S-ASC---FHIHPGAAATHYLGS 182 (368)
T ss_dssp EEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEE-C-SSC---CCCEEEETTEEECCC
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEE-C-CCc---eEEccCCCeEEEEEc
Confidence 55421000 124568999999999998874 457888 99877 45554 1 111 234566665677778
Q ss_pred cCCeEEEeeCCC-----CCcceE----EecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeC
Q 017194 167 LDSKLVMWDFSK-----GRPNKI----VNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINI 237 (375)
Q Consensus 167 ~d~~i~~wd~~~-----~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 237 (375)
.|+.+.+.|+.+ ++.... +..+ ..+. + .+ ++..++..+. +.+.+.|.
T Consensus 183 ~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg-------------~~P~---~-~~------~~~~~~~vs~-~~V~viD~ 238 (368)
T 1mda_H 183 CPASLAASDLAAAPAAAGIVGAQCTGAQNCS-------------SQAA---Q-AN------YPGMLVWAVA-SSILQGDI 238 (368)
T ss_dssp CTTSCEEEECCSSCCCCEECCCCSCTTSCBC-------------SCCE---E-ET------TTTEEEECBS-SCCEEEEC
T ss_pred CCCCEEEEECccccccCCeEEEEeeeeeeCC-------------CCcc---c-cc------cCCEEEEEcC-CEEEEEEC
Confidence 899998899876 332211 1111 1122 2 44 4555555555 89999998
Q ss_pred CCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecC----
Q 017194 238 ESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGN---- 313 (375)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~---- 313 (375)
.+.......... +.. .. ....... ......++++ |+++.++.+..
T Consensus 239 ~~~~~~v~~~~~---------~~~---------------~~--~~~~~~~--p~g~~~v~~s---~dg~~lyV~~~~~~~ 287 (368)
T 1mda_H 239 PAAGATMKAAID---------GNE---------------SG--RKADNFR--SAGFQMVAKL---KNTDGIMILTVEHSR 287 (368)
T ss_dssp CSSCCEEECCCC---------SSC---------------TH--HHHTTEE--ECSSSCEEEE---TTTTEEEEEEEECSS
T ss_pred CCCcceEEEEEE---------ecc---------------cc--ccccccc--cCcceeeEEc---CCCCEEEEEeccccC
Confidence 753211000000 000 00 0000000 0111125788 89887775432
Q ss_pred -----CCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCc-EEEee-CCCeEEEEecC
Q 017194 314 -----DKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESEN-LVVCD-TSKVVKVYSIS 375 (375)
Q Consensus 314 -----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-l~s~~-~dg~v~iw~~~ 375 (375)
++.+.++|+.+.+ .+..+... .....++++| |+++ +++.. .++.|.++|+.
T Consensus 288 ~~~~~~~~~~ViD~~t~~---------vv~~i~vg-~~p~gi~~s~-Dg~~l~va~~~~~~~VsVID~~ 345 (368)
T 1mda_H 288 SCLAAAENTSSVTASVGQ---------TSGPISNG-HDSDAIIAAQ-DGASDNYANSAGTEVLDIYDAA 345 (368)
T ss_dssp CTTSCEEEEEEEESSSCC---------EEECCEEE-EEECEEEECC-SSSCEEEEEETTTTEEEEEESS
T ss_pred cccccCCCEEEEECCCCe---------EEEEEECC-CCcceEEECC-CCCEEEEEccCCCCeEEEEECC
Confidence 2356699999984 33333322 3688999999 8874 55566 59999999973
No 217
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.57 E-value=2.2e-13 Score=113.63 Aligned_cols=182 Identities=10% Similarity=0.078 Sum_probs=131.1
Q ss_pred ceeEEEEecCCCCEEEEeCCCCcEEEEecccCc---------e-eeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEE
Q 017194 17 TATCCIASRDRPGFVASSGEDGCICWFDLRSKD---------V-QLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFD 86 (375)
Q Consensus 17 ~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~---------~-~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd 86 (375)
+++.+++++. ..++++|+.++ +++|+++... . ......+.. |+.++| +++.|+++ .++.|++||
T Consensus 39 ~~nlLais~~-~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNS-KSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETT-TTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCC-CCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 6899999999 78899998875 6779976443 1 112223566 999999 88899888 789999999
Q ss_pred CCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEee
Q 017194 87 VHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGG 166 (375)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 166 (375)
+.+....... ..|...+.++.+.+.. ++++..||.|.+||+.++.... +...|++++|+|+| ++.|.
T Consensus 113 v~sl~~~~~~---~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~-----~~~~Vs~v~WSpkG---~~vg~ 179 (388)
T 1xip_A 113 LEELSEFRTV---TSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ-----LAQNVTSFDVTNSQ---LAVLL 179 (388)
T ss_dssp SSSTTCEEEE---EECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE-----EEESEEEEEECSSE---EEEEE
T ss_pred chhhhccCcc---ceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc-----ccCCceEEEEcCCc---eEEEE
Confidence 9865433323 3345678888777653 8888999999999998776542 34589999999998 57788
Q ss_pred cCCeEEEeeCCCCCc--ceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe
Q 017194 167 LDSKLVMWDFSKGRP--NKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK 227 (375)
Q Consensus 167 ~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~ 227 (375)
.||++++|+...++. ..++..+ |.... ..-+...|.+|.|.+ ++.++++-.
T Consensus 180 ~dg~i~~~~~~~~~~~~k~~I~~P-p~~~~---~~~~~~~V~sI~wl~------~~~flv~y~ 232 (388)
T 1xip_A 180 KDRSFQSFAWRNGEMEKQFEFSLP-SELEE---LPVEEYSPLSVTILS------PQDFLAVFG 232 (388)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCC-HHHHT---SCTTTSEEEEEEESS------SSEEEEEEE
T ss_pred cCCcEEEEcCCCccccccceecCC-ccccc---ccCCCeeEEEEEEec------CCeEEEEEc
Confidence 999999999877664 4445211 11000 001357899999998 677777643
No 218
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.56 E-value=3.2e-13 Score=112.67 Aligned_cols=180 Identities=9% Similarity=-0.006 Sum_probs=129.2
Q ss_pred cceeEEEEcCCCCeEEEEeCCCcEEEEeCcCce-----------eeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEE
Q 017194 104 EEINQIVCNPKSSFLACADDGGDVKIIDIRQHC-----------LYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLV 172 (375)
Q Consensus 104 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~ 172 (375)
.+++.+++++...++++|+.++ +.+|+++..+ ..... .+.. |+.++| ++. .|+++ .++.|+
T Consensus 38 ~~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~--~lp~-V~~l~f--d~~-~L~v~-~~~~l~ 109 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK--EIPD-VIFVCF--HGD-QVLVS-TRNALY 109 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE--ECTT-EEEEEE--ETT-EEEEE-ESSEEE
T ss_pred ccccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe--eCCC-eeEEEE--CCC-EEEEE-cCCcEE
Confidence 4689999999999999998874 6679876433 11222 3566 999999 666 67777 889999
Q ss_pred EeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCC
Q 017194 173 MWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKP 252 (375)
Q Consensus 173 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 252 (375)
+||+++......... +...+.++.+.+ . .+++++.||.|.+||+.++..
T Consensus 110 v~dv~sl~~~~~~~~-------------~~~~v~~i~~~~-------p-~~av~~~dG~L~v~dl~~~~~---------- 158 (388)
T 1xip_A 110 SLDLEELSEFRTVTS-------------FEKPVFQLKNVN-------N-TLVILNSVNDLSALDLRTKST---------- 158 (388)
T ss_dssp EEESSSTTCEEEEEE-------------CSSCEEEEEECS-------S-EEEEEETTSEEEEEETTTCCE----------
T ss_pred EEEchhhhccCccce-------------eecceeeEEecC-------C-CEEEEECCCCEEEEEccCCcc----------
Confidence 999987765444432 235577776654 2 288889999999999996421
Q ss_pred CCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCcee--eee
Q 017194 253 LKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQG--VQT 330 (375)
Q Consensus 253 ~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~ 330 (375)
. . +...|++++|| |+| ++.|..||.+++|+...... ...
T Consensus 159 ------------------------------~-~---~~~~Vs~v~WS---pkG--~~vg~~dg~i~~~~~~~~~~~~k~~ 199 (388)
T 1xip_A 159 ------------------------------K-Q---LAQNVTSFDVT---NSQ--LAVLLKDRSFQSFAWRNGEMEKQFE 199 (388)
T ss_dssp ------------------------------E-E---EEESEEEEEEC---SSE--EEEEETTSCEEEEEEETTEEEEEEE
T ss_pred ------------------------------c-c---ccCCceEEEEc---CCc--eEEEEcCCcEEEEcCCCccccccce
Confidence 1 1 34579999999 888 67788899999998887652 211
Q ss_pred cchhhhhhhhcccccceeeeeecCCCCCcEEE
Q 017194 331 SINNDLLIKNINLNKKVNWLCTTPTESENLVV 362 (375)
Q Consensus 331 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 362 (375)
...+..+....+|...|.++.|.+ ++.++++
T Consensus 200 I~~Pp~~~~~~~~~~~V~sI~wl~-~~~flv~ 230 (388)
T 1xip_A 200 FSLPSELEELPVEEYSPLSVTILS-PQDFLAV 230 (388)
T ss_dssp ECCCHHHHTSCTTTSEEEEEEESS-SSEEEEE
T ss_pred ecCCcccccccCCCeeEEEEEEec-CCeEEEE
Confidence 211122222235788999999999 8888877
No 219
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.55 E-value=1.4e-12 Score=119.37 Aligned_cols=240 Identities=11% Similarity=0.041 Sum_probs=147.7
Q ss_pred cCccEEEEEEeCCCCeEEEEcC-----CCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCc-----
Q 017194 57 GNGPVTSLCFKSGNEDIIYVSS-----GKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGD----- 126 (375)
Q Consensus 57 ~~~~v~~l~~~~~~~~l~~~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~----- 126 (375)
|...+..++|||||++|+.+.. ...|++||+.+++.... .+. ......++|+ |++.|+.++.+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~--~~~--~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET--PLK--DVKFSGISWL-GNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE--EEE--EEESCCCEEE-TTTEEEEEESSCCC----
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc--ccC--CceeccEEEe-CCCEEEEEEecCcccccc
Confidence 4557888999999999886432 24799999998764322 111 1124678999 9999998887743
Q ss_pred --------EEEEeCcCcee--eeeEec-C-cccceeEEEEeeCCCcEEEEeec---CCeEEEeeCCCCC-cceEEecCCC
Q 017194 127 --------VKIIDIRQHCL--YKSLRA-G-HSSICSSVQFIPWKPWEVISGGL---DSKLVMWDFSKGR-PNKIVNFGLP 190 (375)
Q Consensus 127 --------i~iwd~~~~~~--~~~~~~-~-~~~~v~~~~~~~~~~~~l~~~~~---d~~i~~wd~~~~~-~~~~~~~~~~ 190 (375)
|++|++.++.. ...+.. . |......+.|+|+|++++++... +..|+++|+.++. ....+...
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~-- 279 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD-- 279 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS--
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC--
Confidence 99999876542 222220 2 34457889999999965555543 3589999998764 34444422
Q ss_pred CCCCCCCcccCCCceeEEeecCCccccCCCCEE-EEEecC---CcEEEEeCCCcceeecccccCCCCCCceeecccccce
Q 017194 191 ENNGNAGQCYNPAFVHAIAIPDADMLDKTNKIC-VVAKGD---GVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRD 266 (375)
Q Consensus 191 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l-~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~ 266 (375)
....... +++ ++..| +....+ +.|..+|+.++...
T Consensus 280 -----------~~~~~~~-~~~------~g~~l~~~t~~~~~~~~l~~~d~~~~~~~----------------------- 318 (693)
T 3iuj_A 280 -----------LDADVSL-VDN------KGSTLYLLTNRDAPNRRLVTVDAANPGPA----------------------- 318 (693)
T ss_dssp -----------SSSCEEE-EEE------ETTEEEEEECTTCTTCEEEEEETTSCCGG-----------------------
T ss_pred -----------CCceEEE-Eec------cCCEEEEEECCCCCCCEEEEEeCCCCCcc-----------------------
Confidence 2233333 444 34444 444433 57888888764210
Q ss_pred eeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecC-CC--eEEEEeCCCceeeeecchhhhhhhhccc
Q 017194 267 AEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGN-DK--LVKVWDCSRFQGVQTSINNDLLIKNINL 343 (375)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 343 (375)
.++ .+..|...+. .|+ +++++|+.... ++ .|++|++..... .......
T Consensus 319 ------------~~~---~l~~~~~~~~--~~s---~~g~~lv~~~~~~g~~~l~~~d~~g~~~---------~~l~~p~ 369 (693)
T 3iuj_A 319 ------------HWR---DLIPERQQVL--TVH---SGSGYLFAEYMVDATARVEQFDYEGKRV---------REVALPG 369 (693)
T ss_dssp ------------GCE---EEECCCSSCE--EEE---EETTEEEEEEEETTEEEEEEECTTSCEE---------EEECCSS
T ss_pred ------------ccE---EEecCCCCEE--EEE---EECCEEEEEEEECCeeEEEEEECCCCee---------EEeecCC
Confidence 011 2334444444 778 77777776654 43 689999886521 1111223
Q ss_pred ccceeeeeecCCCCCcEEEeeCC----CeEEEEec
Q 017194 344 NKKVNWLCTTPTESENLVVCDTS----KVVKVYSI 374 (375)
Q Consensus 344 ~~~v~~~~~~~~~~~~l~s~~~d----g~v~iw~~ 374 (375)
.+.+..+.+++ +++.|+....+ +.|+.||+
T Consensus 370 ~~~~~~~~~~~-d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 370 LGSVSGFNGKH-DDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp SSEEEECCCCT-TCSCEEEEEECSSSCCEEEEECT
T ss_pred CceEEeeecCC-CCCEEEEEecCCCCCCEEEEEEC
Confidence 45577777777 66666554443 78888876
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.55 E-value=7.6e-12 Score=102.82 Aligned_cols=242 Identities=9% Similarity=-0.028 Sum_probs=153.5
Q ss_pred eeeEeeecCccEEEEEEeCCCC-eEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEE
Q 017194 50 VQLVTDVGNGPVTSLCFKSGNE-DIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVK 128 (375)
Q Consensus 50 ~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 128 (375)
.+..+...........|+|+++ .+++...++.|..|+.. ++ .. .+..+...+..++++++++++++...++.|.
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~---~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~ 110 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VD---VLLDATAFTNGNAVDAQQRLVHCEHGRRAIT 110 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EE---EEEESCSCEEEEEECTTSCEEEEETTTTEEE
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EE---EEeCCCCccceeeECCCCCEEEEECCCCEEE
Confidence 3455555566778899999998 55666678899999974 33 22 2222356788999999998776666668899
Q ss_pred EEeCcCceeeeeEe--cC-cccceeEEEEeeCCCcEEEE----eec-------------CCeEEEeeCCCCCcceEEecC
Q 017194 129 IIDIRQHCLYKSLR--AG-HSSICSSVQFIPWKPWEVIS----GGL-------------DSKLVMWDFSKGRPNKIVNFG 188 (375)
Q Consensus 129 iwd~~~~~~~~~~~--~~-~~~~v~~~~~~~~~~~~l~~----~~~-------------d~~i~~wd~~~~~~~~~~~~~ 188 (375)
+|+.. ++...... .+ ....+..+++.|+|. ++++ |.. .+.|..||..+++..... .
T Consensus 111 ~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~ 186 (305)
T 3dr2_A 111 RSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--D 186 (305)
T ss_dssp EECTT-SCEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--E
T ss_pred EECCC-CCEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--c
Confidence 99986 54322111 01 113467899999998 6665 332 256888887666644332 2
Q ss_pred CCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecC------CcEEEEeCCCcceeecccccCCCCCCceeeccc
Q 017194 189 LPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGD------GVVDVINIESELNISRSKSTTKPLKGSQSTSKV 262 (375)
Q Consensus 189 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~ 262 (375)
....+.++|+| +++.|+++... +.|.+|++.... ..
T Consensus 187 -------------~~~p~gl~~sp------dg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~------------------ 228 (305)
T 3dr2_A 187 -------------LDHPNGLAFSP------DEQTLYVSQTPEQGHGSVEITAFAWRDGA-LH------------------ 228 (305)
T ss_dssp -------------ESSEEEEEECT------TSSEEEEEECCC---CCCEEEEEEEETTE-EE------------------
T ss_pred -------------CCCCcceEEcC------CCCEEEEEecCCcCCCCCEEEEEEecCCC-cc------------------
Confidence 13567899999 79888877665 689999887531 00
Q ss_pred ccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcc
Q 017194 263 NIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNIN 342 (375)
Q Consensus 263 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 342 (375)
..+..... .......++++ ++|++.++. .+ .|.+|+.... .+..+..
T Consensus 229 ----------------~~~~~~~~--~~~~pdgi~~d---~~G~lwv~~-~~-gv~~~~~~g~----------~~~~~~~ 275 (305)
T 3dr2_A 229 ----------------DRRHFASV--PDGLPDGFCVD---RGGWLWSSS-GT-GVCVFDSDGQ----------LLGHIPT 275 (305)
T ss_dssp ----------------EEEEEECC--SSSCCCSEEEC---TTSCEEECC-SS-EEEEECTTSC----------EEEEEEC
T ss_pred ----------------CCeEEEEC--CCCCCCeEEEC---CCCCEEEec-CC-cEEEECCCCC----------EEEEEEC
Confidence 00111111 12334567888 899855544 44 4999998542 2222222
Q ss_pred cccceeeeeecCCCCCcEEEeeCCCeEEEEec
Q 017194 343 LNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 343 ~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
+. .+..++|.+ +++.|..++.++ +..+++
T Consensus 276 ~~-~~~~~~f~~-d~~~L~it~~~~-l~~~~~ 304 (305)
T 3dr2_A 276 PG-TASNCTFDQ-AQQRLFITGGPC-LWMLPL 304 (305)
T ss_dssp SS-CCCEEEECT-TSCEEEEEETTE-EEEEEC
T ss_pred CC-ceeEEEEeC-CCCEEEEEcCCe-EEEEEC
Confidence 22 578899996 888888877764 444443
No 221
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.52 E-value=5.6e-11 Score=98.51 Aligned_cols=226 Identities=9% Similarity=0.012 Sum_probs=142.9
Q ss_pred cEEEEEEeCCCC-eEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceee
Q 017194 60 PVTSLCFKSGNE-DIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLY 138 (375)
Q Consensus 60 ~v~~l~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 138 (375)
-.....|+|++. .+++...++.|..||..+++. ..+. . ...+.+++++++++++++. .+ .|.+||..+++..
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~---~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRK-TVHA-L---PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLT 122 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEEE-C---SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEE-C---CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEE
Confidence 345778999754 555666678999999986542 2221 1 4578999999999876654 44 4999999877653
Q ss_pred eeEecC---cccceeEEEEeeCCCcEEEEeec------CCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEe
Q 017194 139 KSLRAG---HSSICSSVQFIPWKPWEVISGGL------DSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIA 209 (375)
Q Consensus 139 ~~~~~~---~~~~v~~~~~~~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 209 (375)
...... ....+.+++++|+|. ++++... .+.|..++ +++.. .+... ......++
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~-------------~~~~~~i~ 185 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KGKVT-KLFAD-------------ISIPNSIC 185 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEE-------------ESSEEEEE
T ss_pred EEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCC-------------CcccCCeE
Confidence 322200 124688999999997 5554432 24566666 44432 22211 23467899
Q ss_pred ecCCccccCCCCEEEEE-ecCCcEEEEeCC--Cc-ceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeee
Q 017194 210 IPDADMLDKTNKICVVA-KGDGVVDVINIE--SE-LNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYS 285 (375)
Q Consensus 210 ~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~--~~-~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~ 285 (375)
|+| +++.++++ +.++.|.+||+. ++ ... ..+.+..
T Consensus 186 ~s~------dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~-----------------------------------~~~~~~~ 224 (326)
T 2ghs_A 186 FSP------DGTTGYFVDTKVNRLMRVPLDARTGLPTG-----------------------------------KAEVFID 224 (326)
T ss_dssp ECT------TSCEEEEEETTTCEEEEEEBCTTTCCBSS-----------------------------------CCEEEEE
T ss_pred EcC------CCCEEEEEECCCCEEEEEEcccccCCccc-----------------------------------CceEEEE
Confidence 998 78776555 457899999986 32 100 0011122
Q ss_pred ecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeec-CCCCCcEEEee
Q 017194 286 VGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTT-PTESENLVVCD 364 (375)
Q Consensus 286 ~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~s~~ 364 (375)
+.........++++ ++|.+.++...++.|.+||.. + +.+..+..+...+.+++|. + +++.|+.++
T Consensus 225 ~~~~~~~p~gi~~d---~~G~lwva~~~~~~v~~~d~~-g---------~~~~~i~~~~~~~~~~af~g~-d~~~L~vt~ 290 (326)
T 2ghs_A 225 STGIKGGMDGSVCD---AEGHIWNARWGEGAVDRYDTD-G---------NHIARYEVPGKQTTCPAFIGP-DASRLLVTS 290 (326)
T ss_dssp CTTSSSEEEEEEEC---TTSCEEEEEETTTEEEEECTT-C---------CEEEEEECSCSBEEEEEEEST-TSCEEEEEE
T ss_pred CCCCCCCCCeeEEC---CCCCEEEEEeCCCEEEEECCC-C---------CEEEEEECCCCCcEEEEEecC-CCCEEEEEe
Confidence 33334456788888 899887777667889999984 4 2233334445578999998 6 766665543
No 222
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.51 E-value=2.4e-12 Score=108.92 Aligned_cols=259 Identities=11% Similarity=0.062 Sum_probs=163.5
Q ss_pred cCCCCCeeeecCCCceeEEEEecCCCCEEEEeC----------CCCcEEEEecccCceeeEeeec-------CccEEEEE
Q 017194 3 DAEAKPRRLRGHKATATCCIASRDRPGFVASSG----------EDGCICWFDLRSKDVQLVTDVG-------NGPVTSLC 65 (375)
Q Consensus 3 ~~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~----------~d~~i~iw~~~~~~~~~~~~~~-------~~~v~~l~ 65 (375)
++.+.+.++..-..+ .++++|| +++|+.+. .++.|.++|..+++.+..+... ......+.
T Consensus 107 ~t~~vv~~I~vG~~P--gia~SpD-gk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~ 183 (426)
T 3c75_H 107 STGRILGMTDGGFLP--HPVAAED-GSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNA 183 (426)
T ss_dssp TTTEEEEEEEECSSC--EEEECTT-SSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSE
T ss_pred CCCEEEEEEECCCCC--ceEECCC-CCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEE
Confidence 345556666644555 7999999 67666664 3678999999999998887642 23456789
Q ss_pred EeCCCCeEEEEcC--CCeEEEEECCCCCcccccccccCCCcceeEEEEcCCC-CeEEEEeCCCcEEEEeCcCceeee---
Q 017194 66 FKSGNEDIIYVSS--GKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKS-SFLACADDGGDVKIIDIRQHCLYK--- 139 (375)
Q Consensus 66 ~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~--- 139 (375)
|+|||++++++.. ++.|.+.|+.+.+....+..- +. ....|++ +.+++.+.||.+.+.+..+++...
T Consensus 184 ~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~----g~---~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~ 256 (426)
T 3c75_H 184 LTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP----DC---YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNT 256 (426)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC----SE---EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEEC
T ss_pred EcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC----Cc---eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEee
Confidence 9999999998864 578999999987655444431 11 2233332 455666677777777775554442
Q ss_pred -eEecCcccc-eeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcc--eEEecCCCCCCCCCCcccCCCceeEEeecCCcc
Q 017194 140 -SLRAGHSSI-CSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPN--KIVNFGLPENNGNAGQCYNPAFVHAIAIPDADM 215 (375)
Q Consensus 140 -~~~~~~~~~-v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 215 (375)
.+. ....+ ...+.+.+++. .++.....+.|.+.|+...... ..+..... ........+.....++++|
T Consensus 257 ~~~~-v~~~p~~~~~~~~~dg~-~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~---~~i~~g~~p~g~~~va~s~--- 328 (426)
T 3c75_H 257 EVFH-TEDELLINHPAFSLRSG-RLVWPTYTGKIFQADLTAEGATFRAPIEALTE---AERADDWRPGGWQQTAYHR--- 328 (426)
T ss_dssp CCCS-CTTSCBCSCCEECTTTC-EEEEEBTTSEEEEEEECSSCEEECCCEESSCT---TTGGGTEEECSSSCEEEEG---
T ss_pred eeec-cCCCceeeEeeecCCCC-EEEEEeCCCcEEEEeccCCceEEeeeeeeccc---cccccccccCCceeeEEcC---
Confidence 122 11112 12456788887 4555567889999998754321 11111000 0000000112223467888
Q ss_pred ccCCCCEEEEEec----------CCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeee
Q 017194 216 LDKTNKICVVAKG----------DGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYS 285 (375)
Q Consensus 216 ~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~ 285 (375)
+++.+++... ++.|.++|+.+.+.. .+
T Consensus 329 ---dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv----------------------------------------~~ 365 (426)
T 3c75_H 329 ---QSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERI----------------------------------------NK 365 (426)
T ss_dssp ---GGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE----------------------------------------EE
T ss_pred ---CCCEEEEEecccccccccCCCCEEEEEECCCCeEE----------------------------------------EE
Confidence 6777777643 357999999985332 22
Q ss_pred ecCCCccEEEEEEeecCCCCc-EEEEec-CCCeEEEEeCCCce
Q 017194 286 VGGHTAAASCVAFSMFGERGK-YLISGG-NDKLVKVWDCSRFQ 326 (375)
Q Consensus 286 ~~~~~~~v~~~~~s~~~~~~~-~l~s~~-~dg~i~iwd~~~~~ 326 (375)
+.. ......++|+ |||+ ++++.. .++.|.++|+.+.+
T Consensus 366 I~v-g~~P~gia~s---pDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 366 IEL-GHEIDSINVS---QDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp EEE-EEEECEEEEC---CSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred EEC-CCCcCeEEEc---cCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 221 1247889999 9998 777777 59999999999984
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.50 E-value=1.1e-11 Score=103.73 Aligned_cols=208 Identities=17% Similarity=0.173 Sum_probs=134.3
Q ss_pred cCCCCEEEEeCCCCcEEEEecccC----ceeeEee-------ecCccEEEEEEeCCCCeEEEEcCC------CeEEEEEC
Q 017194 25 RDRPGFVASSGEDGCICWFDLRSK----DVQLVTD-------VGNGPVTSLCFKSGNEDIIYVSSG------KEVKSFDV 87 (375)
Q Consensus 25 ~~~~~~l~s~~~d~~i~iw~~~~~----~~~~~~~-------~~~~~v~~l~~~~~~~~l~~~~~d------~~i~iwd~ 87 (375)
++...+++++..++.|.++|+.+. +..++++ ........+...|+| .++++..+ +.|.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 664445667778899999998755 4455553 111245567788999 66665554 78999999
Q ss_pred CCCCcccccccccCCCcceeEEEEcCCCCeEEEEe-------------------CCCcEEEEeCcCceeeeeEecC-ccc
Q 017194 88 HMPASWRPLESYNYNKEEINQIVCNPKSSFLACAD-------------------DGGDVKIIDIRQHCLYKSLRAG-HSS 147 (375)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------------------~dg~i~iwd~~~~~~~~~~~~~-~~~ 147 (375)
++.+....+..-.....--..+.|+|+++.+++.. ....|.+||+.+++.+.++..+ ...
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 98766555543222122344688899999888874 3688999999999888888732 223
Q ss_pred ceeEEEE--eeCCCcEEEEee-----cCCeEEEeeCCCCCcc--eEEecCCCCCCCCCCccc-----CCCceeEEeecCC
Q 017194 148 ICSSVQF--IPWKPWEVISGG-----LDSKLVMWDFSKGRPN--KIVNFGLPENNGNAGQCY-----NPAFVHAIAIPDA 213 (375)
Q Consensus 148 ~v~~~~~--~~~~~~~l~~~~-----~d~~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~ 213 (375)
....+.| +|++++.++++. .+++|.+|....++.. +.+..........-.... .......|.++|
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~- 330 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL- 330 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT-
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC-
Confidence 4556666 999996556666 7789988777654321 122111100000000000 023567888988
Q ss_pred ccccCCCCEEEEEec-CCcEEEEeCCC
Q 017194 214 DMLDKTNKICVVAKG-DGVVDVINIES 239 (375)
Q Consensus 214 ~~~~~~~~~l~~~~~-dg~i~i~d~~~ 239 (375)
|+++|.++.. .+.|.+||+..
T Consensus 331 -----DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 331 -----DDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp -----TSCEEEEEETTTTEEEEEECSS
T ss_pred -----CCCEEEEEeCCCCEEEEEEecC
Confidence 8999988874 68999999864
No 224
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.50 E-value=5.9e-11 Score=100.65 Aligned_cols=261 Identities=10% Similarity=0.047 Sum_probs=160.1
Q ss_pred CCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCC--cc
Q 017194 28 PGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNK--EE 105 (375)
Q Consensus 28 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~~ 105 (375)
+..++.++.++.|..+|.++++.+................ +..++.++.++.|..+|.++++............ ..
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~ 180 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG 180 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence 3567778888999999999999877666443222222222 3467888889999999998876543332210000 00
Q ss_pred eeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccc----------eeEEEEeeCCCcEEEEeecCCeEEEee
Q 017194 106 INQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSI----------CSSVQFIPWKPWEVISGGLDSKLVMWD 175 (375)
Q Consensus 106 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~----------v~~~~~~~~~~~~l~~~~~d~~i~~wd 175 (375)
....... +..++++..++.+..+|..+++.+.... ..... +...-...+ . .++.++.++.+..+|
T Consensus 181 ~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~-~~~~~~~~~~~~~~~~~~~p~~~~-~-~v~~~~~~g~l~~~d 255 (376)
T 3q7m_A 181 ESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQR-ISQATGSTEIDRLSDVDTTPVVVN-G-VVFALAYNGNLTALD 255 (376)
T ss_dssp CCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEE-CCC-----------CCCCCCEEET-T-EEEEECTTSCEEEEE
T ss_pred CCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEe-cccCCCCcccccccccCCCcEEEC-C-EEEEEecCcEEEEEE
Confidence 0111222 3477888889999999999998877665 21100 111111113 3 577888899999999
Q ss_pred CCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCC
Q 017194 176 FSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKG 255 (375)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 255 (375)
.++++.+...... ....+.. ++..+++++.++.|..+|..+++.......
T Consensus 256 ~~tG~~~w~~~~~---------------~~~~~~~--------~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~------- 305 (376)
T 3q7m_A 256 LRSGQIMWKRELG---------------SVNDFIV--------DGNRIYLVDQNDRVMALTIDGGVTLWTQSD------- 305 (376)
T ss_dssp TTTCCEEEEECCC---------------CEEEEEE--------ETTEEEEEETTCCEEEEETTTCCEEEEECT-------
T ss_pred CCCCcEEeeccCC---------------CCCCceE--------ECCEEEEEcCCCeEEEEECCCCcEEEeecc-------
Confidence 9999887766532 2334444 366788888899999999998643321110
Q ss_pred ceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhh
Q 017194 256 SQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINND 335 (375)
Q Consensus 256 ~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 335 (375)
.....+...... +..|+.++.+|.|.++|..+++..
T Consensus 306 --------------------------------~~~~~~~~~~~~-----~~~l~v~~~~g~l~~~d~~tG~~~------- 341 (376)
T 3q7m_A 306 --------------------------------LLHRLLTSPVLY-----NGNLVVGDSEGYLHWINVEDGRFV------- 341 (376)
T ss_dssp --------------------------------TTTSCCCCCEEE-----TTEEEEECTTSEEEEEETTTCCEE-------
T ss_pred --------------------------------cCCCcccCCEEE-----CCEEEEEeCCCeEEEEECCCCcEE-------
Confidence 011112222222 357788888999999999998533
Q ss_pred hhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEe
Q 017194 336 LLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYS 373 (375)
Q Consensus 336 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~ 373 (375)
.........+...... .+..|+.++.+|.|+.|+
T Consensus 342 --~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 342 --AQQKVDSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp --EEEECCTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred --EEEecCCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 2222112222221111 234688889999999987
No 225
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.48 E-value=3.2e-11 Score=109.61 Aligned_cols=160 Identities=9% Similarity=-0.021 Sum_probs=107.6
Q ss_pred CCEEEEeCCCCcEEEEecccCceeeEeeec-C----ccEEEEEEeCCCCeEEEEcC------CCeEEEEECCCCCccccc
Q 017194 28 PGFVASSGEDGCICWFDLRSKDVQLVTDVG-N----GPVTSLCFKSGNEDIIYVSS------GKEVKSFDVHMPASWRPL 96 (375)
Q Consensus 28 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~-~----~~v~~l~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~ 96 (375)
+..|+.++.|+.|..+|..+|+.+..+..+ . ..+.+--...+ ..+++++. ++.|+.+|.++++..-..
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~-~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFK-GKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEEC-CEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 457888888999999999999998877654 1 12221111113 34555543 689999999988765333
Q ss_pred ccccC-----------------------------CCcceeEEEEcCCCCeEEEEeCCC-------------------cEE
Q 017194 97 ESYNY-----------------------------NKEEINQIVCNPKSSFLACADDGG-------------------DVK 128 (375)
Q Consensus 97 ~~~~~-----------------------------~~~~v~~~~~~~~~~~l~~~~~dg-------------------~i~ 128 (375)
..... .......++++|++..++.+..++ .|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 22111 111224578889888998887664 499
Q ss_pred EEeCcCceeeeeEecC-cc-------cceeEEEEeeCCC--cEEEEeecCCeEEEeeCCCCCcceEEecC
Q 017194 129 IIDIRQHCLYKSLRAG-HS-------SICSSVQFIPWKP--WEVISGGLDSKLVMWDFSKGRPNKIVNFG 188 (375)
Q Consensus 129 iwd~~~~~~~~~~~~~-~~-------~~v~~~~~~~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 188 (375)
.+|.++++.+..++.. |. ....-+....+|+ ..++.++.+|.++++|.++++.+..+...
T Consensus 287 AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~ 356 (677)
T 1kb0_A 287 ALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFV 356 (677)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESS
T ss_pred EEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecccccc
Confidence 9999999998877622 21 1222233344662 27899999999999999999998887754
No 226
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.46 E-value=1.1e-13 Score=116.68 Aligned_cols=186 Identities=14% Similarity=0.078 Sum_probs=105.5
Q ss_pred CCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCccee
Q 017194 28 PGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEIN 107 (375)
Q Consensus 28 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~ 107 (375)
+..+++++.||.|..||..+|+.+..+.. ..+.+..+..++..+++++.|+.|+.||.++++......... ...+.
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~--~~~~~ 84 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTI--PELVQ 84 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCH--HHHHT
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccC--ccccc
Confidence 57889999999999999999999888875 455555566677778888899999999998776533222100 01111
Q ss_pred -EEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEe
Q 017194 108 -QIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVN 186 (375)
Q Consensus 108 -~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 186 (375)
...+. ++..+++++.++.++.||.++++.+..+. .+. ...++|++. .+++++.|+.|+.||.++++.+..+.
T Consensus 85 ~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~-~~~----~~~~~p~~~-~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 85 ASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLS-SAF----ADSLSPSTS-LLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp TCSCC------CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred cCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEec-CCC----cccccccCC-EEEEEecCCEEEEEECCCCCEEEeEe
Confidence 11111 34467788889999999999999988776 433 234566666 68889999999999999999887765
Q ss_pred cCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcce
Q 017194 187 FGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELN 242 (375)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 242 (375)
.. ......+.+.. . ....+++++.+|.|+.||..+++.
T Consensus 158 ~~---------------~~~~~~~~~~~--~-~~~~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 158 YF---------------DYAASLPEDDV--D-YKMSHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp EE---------------EECCBCCCCCT--T-CCCCEEEEETSCEEEEECTTTCCE
T ss_pred cc---------------cccCccccCCc--c-ccceEEEECCCCEEEEEECCCCcE
Confidence 32 11112222200 0 015677889999999999998643
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.44 E-value=5.8e-11 Score=108.12 Aligned_cols=160 Identities=8% Similarity=0.003 Sum_probs=104.4
Q ss_pred CCEEEEeCCCCcEEEEecccCceeeEeeec--CccEEEEEEeC---CCCeEEEEc------CCCeEEEEECCCCCccccc
Q 017194 28 PGFVASSGEDGCICWFDLRSKDVQLVTDVG--NGPVTSLCFKS---GNEDIIYVS------SGKEVKSFDVHMPASWRPL 96 (375)
Q Consensus 28 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~--~~~v~~l~~~~---~~~~l~~~~------~d~~i~iwd~~~~~~~~~~ 96 (375)
+..|+.++.|+.|..+|..+|+.+...... ......+..+| ++ .+++++ .++.|+.||.++++..-..
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 457888888999999999999988776542 11111111112 44 344443 2689999999998764333
Q ss_pred cccc----------------------------CCCcceeEEEEcCCCCeEEEEeCCCc-------------------EEE
Q 017194 97 ESYN----------------------------YNKEEINQIVCNPKSSFLACADDGGD-------------------VKI 129 (375)
Q Consensus 97 ~~~~----------------------------~~~~~v~~~~~~~~~~~l~~~~~dg~-------------------i~i 129 (375)
.... .+......++++|+...++.+..++. |..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 2211 00111235788898889999887763 999
Q ss_pred EeCcCceeeeeEecC-cc-------cceeEEEEeeCCC--cEEEEeecCCeEEEeeCCCCCcceEEecC
Q 017194 130 IDIRQHCLYKSLRAG-HS-------SICSSVQFIPWKP--WEVISGGLDSKLVMWDFSKGRPNKIVNFG 188 (375)
Q Consensus 130 wd~~~~~~~~~~~~~-~~-------~~v~~~~~~~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 188 (375)
+|.++++.+-.++.. |. .++.-.....+|+ ..++.++.+|.++++|.++|+.+....+.
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~ 348 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIV 348 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESS
T ss_pred EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccc
Confidence 999999998887621 21 1112222223442 25888999999999999999998766543
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.43 E-value=2.9e-11 Score=109.82 Aligned_cols=203 Identities=11% Similarity=0.001 Sum_probs=128.5
Q ss_pred CEEEEeCCCCcEEEEecccCceeeEeeecCcc-----------EEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccc
Q 017194 29 GFVASSGEDGCICWFDLRSKDVQLVTDVGNGP-----------VTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLE 97 (375)
Q Consensus 29 ~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~-----------v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 97 (375)
..|+.++.++.|.-+|..+|+.+..+...... ...+++ .+..+++++.|+.|..+|.++++..-...
T Consensus 78 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 155 (677)
T 1kb0_A 78 GIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQN 155 (677)
T ss_dssp TEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeeec
Confidence 45666777889999999999988776543210 112333 35678888889999999999987654443
Q ss_pred cc-cC-CCcceeE-EEEcCCCCeEEEEeC------CCcEEEEeCcCceeeeeEecCcccc--------------------
Q 017194 98 SY-NY-NKEEINQ-IVCNPKSSFLACADD------GGDVKIIDIRQHCLYKSLRAGHSSI-------------------- 148 (375)
Q Consensus 98 ~~-~~-~~~~v~~-~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~-------------------- 148 (375)
.. .. ....+.. ... .+..+++++. ++.|+.+|.++++.+..+. .....
T Consensus 156 ~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~-~~~~~~~~~~~~~~~~~g~~~w~~~ 232 (677)
T 1kb0_A 156 TFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF-SVPGDPSKPFEDESMKRAARTWDPS 232 (677)
T ss_dssp TTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE-SSCCCTTSCCSSHHHHHHHTTSCGG
T ss_pred CCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEec-cCCCCcccccccccccccccccccc
Confidence 22 10 0011211 111 2345555543 6899999999999987776 22111
Q ss_pred ------------eeEEEEeeCCCcEEEEeecCC-------------------eEEEeeCCCCCcceEEecCCCCCCCCCC
Q 017194 149 ------------CSSVQFIPWKPWEVISGGLDS-------------------KLVMWDFSKGRPNKIVNFGLPENNGNAG 197 (375)
Q Consensus 149 ------------v~~~~~~~~~~~~l~~~~~d~-------------------~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 197 (375)
...++++|++. +++.+..++ .|..+|.++++.+..++....+.-. .
T Consensus 233 g~~~~~~~g~~~w~~~~~d~~~~-~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd-~- 309 (677)
T 1kb0_A 233 GKWWEAGGGGTMWDSMTFDAELN-TMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWD-Y- 309 (677)
T ss_dssp GCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSC-C-
T ss_pred CceeEeCCCcccccceeEcCCCC-EEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccc-c-
Confidence 13578888887 677766553 5999999999999888754111000 0
Q ss_pred cccCCCceeEEeecCCccccCCC---CEEEEEecCCcEEEEeCCCcceeeccc
Q 017194 198 QCYNPAFVHAIAIPDADMLDKTN---KICVVAKGDGVVDVINIESELNISRSK 247 (375)
Q Consensus 198 ~~~~~~~v~~~~~~~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~ 247 (375)
. .......+.... +| ..++.++.+|.++++|..+++.+....
T Consensus 310 ~--~~~~p~l~~~~~------dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 310 T--STQPMILADIKI------AGKPRKVILHAPKNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp C--CCSCCEEEEEEE------TTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred c--cCCCcEEEeccc------CCcEeeEEEEECCCCEEEEEECCCCCEecccc
Confidence 0 001111222222 46 689999999999999999988766543
No 229
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.42 E-value=1.3e-11 Score=102.76 Aligned_cols=298 Identities=9% Similarity=-0.043 Sum_probs=175.7
Q ss_pred eEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCccccccc
Q 017194 19 TCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLES 98 (375)
Q Consensus 19 ~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 98 (375)
.+.....+ + .|..++.++.|..|| .+++.......+...+.++...+++. +..++.+ |..+|. +++......
T Consensus 23 ~~~~~d~~-g-~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~- 94 (330)
T 3hxj_A 23 SSPILAKN-G-TIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFD- 94 (330)
T ss_dssp CCCEECTT-S-CEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSC-
T ss_pred cCceEccC-C-eEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEE-
Confidence 34444444 3 566777788899999 88887666555555567777777765 5555544 888885 443322222
Q ss_pred ccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCC
Q 017194 99 YNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178 (375)
Q Consensus 99 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~ 178 (375)
..........+. +..+.+++.++.+..+|.. ++....+. .....+.++...+++. +..++.++.|..+|..
T Consensus 95 --~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~-~~~~~~~~~~~~~~g~--l~vgt~~~~l~~~d~~- 165 (330)
T 3hxj_A 95 --TKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFK-TKKAIYATPIVSEDGT--IYVGSNDNYLYAINPD- 165 (330)
T ss_dssp --C-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEE-CSSCCCSCCEECTTSC--EEEECTTSEEEEECTT-
T ss_pred --CCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEc-CCCceeeeeEEcCCCE--EEEEcCCCEEEEECCC-
Confidence 112223333333 4578888888999999988 77766666 4555567777777774 7778888999999988
Q ss_pred CCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCcee
Q 017194 179 GRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQS 258 (375)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 258 (375)
++....+... ...+.++.+.+ ++. +.+++ +.|..+| .++........ ......++.
T Consensus 166 g~~~~~~~~~-------------~~~~~~~~~d~------~g~-l~v~t--~~l~~~d-~~g~~~~~~~~-~~~~~~~~~ 221 (330)
T 3hxj_A 166 GTEKWRFKTN-------------DAITSAASIGK------DGT-IYFGS--DKVYAIN-PDGTEKWNFYA-GYWTVTRPA 221 (330)
T ss_dssp SCEEEEEECS-------------SCCCSCCEECT------TCC-EEEES--SSEEEEC-TTSCEEEEECC-SSCCCSCCE
T ss_pred CCEeEEEecC-------------CCceeeeEEcC------CCE-EEEEe--CEEEEEC-CCCcEEEEEcc-CCcceeceE
Confidence 7777666543 23455555654 455 44555 7899999 55554443332 224456667
Q ss_pred ecccccceeee--eeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhh
Q 017194 259 TSKVNIRDAEM--EILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDL 336 (375)
Q Consensus 259 ~s~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 336 (375)
..++|...+.. +.....+. ....+..+......+..+.+. +++ .|..++.+|.|..+|. +++..
T Consensus 222 ~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~---~~g-~l~v~t~~ggl~~~d~-~g~~~-------- 287 (330)
T 3hxj_A 222 ISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIG---NTD-TIYFGSYDGHLYAINP-DGTEK-------- 287 (330)
T ss_dssp ECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEEC---TTS-CEEEECTTCEEEEECT-TSCEE--------
T ss_pred ECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEc---CCC-eEEEecCCCCEEEECC-CCcEE--------
Confidence 77776654431 11111111 111122222222223334444 455 5666777888999996 44321
Q ss_pred hhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEec
Q 017194 337 LIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 337 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
.........+.++...+ ++ .|..++.+|.+++...
T Consensus 288 -~~~~~~~~~~~~~~~d~-~g-~l~~gt~~G~~~~~~~ 322 (330)
T 3hxj_A 288 -WNFETGSWIIATPVIDE-NG-TIYFGTRNGKFYALFN 322 (330)
T ss_dssp -EEEECSSCCCSCCEECT-TC-CEEEECTTSCEEEEEC
T ss_pred -EEEEcCCccccceEEcC-CC-EEEEEcCCCeEEEEec
Confidence 11222234455666655 55 4777889999988653
No 230
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.41 E-value=1.1e-09 Score=92.80 Aligned_cols=269 Identities=9% Similarity=0.046 Sum_probs=159.7
Q ss_pred CCEEEEeCCCCcEEEEecccCceeeEeeec---------CccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCccccccc
Q 017194 28 PGFVASSGEDGCICWFDLRSKDVQLVTDVG---------NGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLES 98 (375)
Q Consensus 28 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~---------~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 98 (375)
+..++.++.++.|..+|.++++.+...... ...+.+.- ..++..++.++.++.|..+|.++++..-....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGV-TVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEE-EEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCc-eEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 356777888899999999999987666542 12232222 22355788888899999999998865433322
Q ss_pred ccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccce-----eEEEEeeCCCcEEEEeecCCeEEE
Q 017194 99 YNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSIC-----SSVQFIPWKPWEVISGGLDSKLVM 173 (375)
Q Consensus 99 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~l~~~~~d~~i~~ 173 (375)
. ......... .+..+++++.++.|..+|.++++.+..+. ...... ...... + . .++.++.++.+..
T Consensus 132 ~---~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~-~~~~~~~~~~~~~~~~~-~-~-~v~~g~~~g~l~~ 202 (376)
T 3q7m_A 132 A---GEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVN-LDMPSLSLRGESAPTTA-F-G-AAVVGGDNGRVSA 202 (376)
T ss_dssp S---SCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEE-CCC-----CCCCCCEEE-T-T-EEEECCTTTEEEE
T ss_pred C---CceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEe-CCCCceeecCCCCcEEE-C-C-EEEEEcCCCEEEE
Confidence 1 111111122 24478888899999999999999887776 322111 122222 3 3 6888888999999
Q ss_pred eeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCC
Q 017194 174 WDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPL 253 (375)
Q Consensus 174 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 253 (375)
+|..+++.+.......+...... ..+..+...|. -.+..+++++.++.+..+|..+++....
T Consensus 203 ~d~~tG~~~w~~~~~~~~~~~~~------~~~~~~~~~p~----~~~~~v~~~~~~g~l~~~d~~tG~~~w~-------- 264 (376)
T 3q7m_A 203 VLMEQGQMIWQQRISQATGSTEI------DRLSDVDTTPV----VVNGVVFALAYNGNLTALDLRSGQIMWK-------- 264 (376)
T ss_dssp EETTTCCEEEEEECCC-----------------CCCCCCE----EETTEEEEECTTSCEEEEETTTCCEEEE--------
T ss_pred EECCCCcEEEEEecccCCCCccc------ccccccCCCcE----EECCEEEEEecCcEEEEEECCCCcEEee--------
Confidence 99999998887764421100000 00000111110 0256778888899999999987643211
Q ss_pred CCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecch
Q 017194 254 KGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSIN 333 (375)
Q Consensus 254 ~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 333 (375)
.. ......+.. ++..+..++.++.|..+|..+++......
T Consensus 265 --------------------------------~~--~~~~~~~~~-----~~~~l~~~~~~g~l~~~d~~tG~~~w~~~- 304 (376)
T 3q7m_A 265 --------------------------------RE--LGSVNDFIV-----DGNRIYLVDQNDRVMALTIDGGVTLWTQS- 304 (376)
T ss_dssp --------------------------------EC--CCCEEEEEE-----ETTEEEEEETTCCEEEEETTTCCEEEEEC-
T ss_pred --------------------------------cc--CCCCCCceE-----ECCEEEEEcCCCeEEEEECCCCcEEEeec-
Confidence 11 112233333 34567777788999999999985432111
Q ss_pred hhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEec
Q 017194 334 NDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 334 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
......+..... .+..|+.++.+|.|.++|.
T Consensus 305 -------~~~~~~~~~~~~---~~~~l~v~~~~g~l~~~d~ 335 (376)
T 3q7m_A 305 -------DLLHRLLTSPVL---YNGNLVVGDSEGYLHWINV 335 (376)
T ss_dssp -------TTTTSCCCCCEE---ETTEEEEECTTSEEEEEET
T ss_pred -------ccCCCcccCCEE---ECCEEEEEeCCCeEEEEEC
Confidence 001111222222 2346888888888888875
No 231
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.40 E-value=4e-11 Score=100.21 Aligned_cols=238 Identities=9% Similarity=0.051 Sum_probs=144.7
Q ss_pred ccEEEEEEeCCCCeEEEEcC--CCeEEEEECCCCCcccccc----cccCCCcceeEEEEcCCCCeEEEEeC-----CCcE
Q 017194 59 GPVTSLCFKSGNEDIIYVSS--GKEVKSFDVHMPASWRPLE----SYNYNKEEINQIVCNPKSSFLACADD-----GGDV 127 (375)
Q Consensus 59 ~~v~~l~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i 127 (375)
..+..++++++|+.+++... ++.++||.+.+++ ...+. ....+-..+..++++++++++++-.. +..|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 67899999999998887642 3435566554332 22221 11224467899999999876665433 5789
Q ss_pred EEEeCcCceeeeeEec-----CcccceeEEEEeeCCCcEEEEee---cCCeEEEeeCCCCCcceEEecCCCCCCCCCCcc
Q 017194 128 KIIDIRQHCLYKSLRA-----GHSSICSSVQFIPWKPWEVISGG---LDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQC 199 (375)
Q Consensus 128 ~iwd~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~~~~---~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 199 (375)
.+||+.+++.+..+.. .+...+..+++++++...+++-. .++.|.+||+.+++....+..+ +.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~-~~-------- 166 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGY-PG-------- 166 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTC-TT--------
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCC-Cc--------
Confidence 9999999987776651 11235689999987653556655 6789999999887754443210 00
Q ss_pred cCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcce
Q 017194 200 YNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKR 279 (375)
Q Consensus 200 ~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~ 279 (375)
..+.. ..+.+ ++..+.+.+.+|.++.|.
T Consensus 167 ~~~~~---~~~~~------~g~~~~~~~~~g~~~~~~------------------------------------------- 194 (343)
T 2qe8_A 167 IAPED---IDLVI------DGVPVQIGQPDGTVIRPH------------------------------------------- 194 (343)
T ss_dssp TSCCS---CCCEE------TTEECBEECTTSCEECCC-------------------------------------------
T ss_pred ccccc---cceeE------CCEEEEeccCCCceecee-------------------------------------------
Confidence 00001 22333 455555555555543321
Q ss_pred eEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCC-eEEEEeCCCceeeeecchhhhhhh--hcccccceeeeeecCCC
Q 017194 280 LHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDK-LVKVWDCSRFQGVQTSINNDLLIK--NINLNKKVNWLCTTPTE 356 (375)
Q Consensus 280 ~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~ 356 (375)
..+..++++ |+|+.|+.+..++ .|..++....... .....+.... ..++.+....+++.+ +
T Consensus 195 -----------~~~~gia~s---~dg~~ly~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~g~~g~pdgia~d~-~ 258 (343)
T 2qe8_A 195 -----------LGVNGIVLD---AENEWLYLSPMHSTSMYRIKSADLSNL-QLTDAELGSKIERYSEKPICDGISIDK-D 258 (343)
T ss_dssp -----------CCEEEEEEC---TTSCEEEEEESSCSEEEEEEHHHHTCT-TCCHHHHHTTCEEEEECCSCSCEEECT-T
T ss_pred -----------cccceeEec---cCCCEEEEEeCCCCeEEEEEHHHhcCC-CCChhhhhcceEecccCCCCceEEECC-C
Confidence 235779999 9998888776655 4544443210000 0000011111 123445667899998 8
Q ss_pred CCcEEEeeCCCeEEEEec
Q 017194 357 SENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 357 ~~~l~s~~~dg~v~iw~~ 374 (375)
|.++++...++.|.+|+.
T Consensus 259 G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 259 HNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp CCEEEEEGGGTEEEEEET
T ss_pred CCEEEEccCCCeEEEEEC
Confidence 988888888999999985
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.38 E-value=7.3e-10 Score=92.84 Aligned_cols=246 Identities=9% Similarity=0.066 Sum_probs=146.9
Q ss_pred CCCCeEEEE-cCCCeEEEEECCCC-Cccccccccc-------CCCcceeEEEEcCCCCeEEEEeCC------CcEEEEeC
Q 017194 68 SGNEDIIYV-SSGKEVKSFDVHMP-ASWRPLESYN-------YNKEEINQIVCNPKSSFLACADDG------GDVKIIDI 132 (375)
Q Consensus 68 ~~~~~l~~~-~~d~~i~iwd~~~~-~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~ 132 (375)
+++++|+.. ..++.|.++|+.+. +..+..+..+ .....-..+.++|++ .++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 777777664 45689999999754 2222323221 011244567889999 66665554 78999999
Q ss_pred cCceeeeeEecC-c-ccceeEEEEeeCCCcEEEEee-------------------cCCeEEEeeCCCCCcceEEecCCCC
Q 017194 133 RQHCLYKSLRAG-H-SSICSSVQFIPWKPWEVISGG-------------------LDSKLVMWDFSKGRPNKIVNFGLPE 191 (375)
Q Consensus 133 ~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~~l~~~~-------------------~d~~i~~wd~~~~~~~~~~~~~~~~ 191 (375)
++++.+.++..+ . ...-..+.|+|+++ .+++.. .+.+|.+||+.+++.+.++..+.
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~-- 248 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE-- 248 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT--
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC--
Confidence 999999888621 1 12234688899998 677764 36899999999988888887641
Q ss_pred CCCCCCcccCCCceeEEee--cCCccccCCCCEEEEEec------CCcEEEEeCCCcceeecccccCCCCCCceeecccc
Q 017194 192 NNGNAGQCYNPAFVHAIAI--PDADMLDKTNKICVVAKG------DGVVDVINIESELNISRSKSTTKPLKGSQSTSKVN 263 (375)
Q Consensus 192 ~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g 263 (375)
.......+.| +| +++++++++. +++|.+|....+.......
T Consensus 249 ---------~g~~P~~i~f~~~P------dg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~v---------------- 297 (462)
T 2ece_A 249 ---------ENRMALELRPLHDP------TKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKV---------------- 297 (462)
T ss_dssp ---------TEEEEEEEEECSST------TCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEE----------------
T ss_pred ---------CCCccceeEeeECC------CCCEEEEEEeeeccCCCceEEEEEecCCceeEEEE----------------
Confidence 0123345544 77 7998888875 5688777664321100000
Q ss_pred cceeeeeeeecCCcceeEeeeee-------cCCCccEEEEEEeecCCCCcEEEEecC-CCeEEEEeCCCce---eeeecc
Q 017194 264 IRDAEMEILDQSGGKRLHLDYSV-------GGHTAAASCVAFSMFGERGKYLISGGN-DKLVKVWDCSRFQ---GVQTSI 332 (375)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~s~~~~~~~~l~s~~~-dg~i~iwd~~~~~---~~~~~~ 332 (375)
.+. ...+....+ .+-......+.+| +||++|.++.. .+.|.+||+.... ......
T Consensus 298 --------Idi---~~~~v~~~lp~~~~~f~~~~~~pa~I~lS---~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~ 363 (462)
T 2ece_A 298 --------IEI---PAEPLEGNLPEILKPFKAVPPLVTDIDIS---LDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVK 363 (462)
T ss_dssp --------EEE---CCEECCSSCCGGGGGGTEECCCCCCEEEC---TTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEE
T ss_pred --------EeC---CCccccccccccccccccCCCceeEEEEC---CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEE
Confidence 000 000000000 0002346778899 99998887755 7899999986431 111100
Q ss_pred hhhhhhhhccc------ccceeeeeecCCCCCcEEEee
Q 017194 333 NNDLLIKNINL------NKKVNWLCTTPTESENLVVCD 364 (375)
Q Consensus 333 ~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~s~~ 364 (375)
.+-.+ ....| .+....++++| ||++|+++.
T Consensus 364 tGG~~-~~~~~~~G~~~~ggPr~~~lSp-DGk~LyVaN 399 (462)
T 2ece_A 364 LGGIF-HRADHPAGHKLTGAPQMLEISR-DGRRVYVTN 399 (462)
T ss_dssp CBTTT-TCBCCTTSCCCCSCCCCEEECT-TSSEEEEEC
T ss_pred eCCee-ccccccccccCCCCCCEEEEcC-CCCEEEEEc
Confidence 00000 00001 12357889999 999988887
No 233
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.36 E-value=1.5e-11 Score=102.34 Aligned_cols=251 Identities=7% Similarity=-0.008 Sum_probs=154.5
Q ss_pred cCCCCCeeeecCCCceeEEEEecCCCCEEEEeC----------CCCcEEEEecccCceeeEeeecC-------ccEEEEE
Q 017194 3 DAEAKPRRLRGHKATATCCIASRDRPGFVASSG----------EDGCICWFDLRSKDVQLVTDVGN-------GPVTSLC 65 (375)
Q Consensus 3 ~~~~~~~~l~~h~~~i~~~~~~~~~~~~l~s~~----------~d~~i~iw~~~~~~~~~~~~~~~-------~~v~~l~ 65 (375)
++++.+.++..-..+ .+.++|| +++++++. .+++|.+||+.+++.+.++..+. .....++
T Consensus 54 ~t~~v~~~i~vG~~P--~i~~spD-g~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia 130 (368)
T 1mda_H 54 GCGVTLGHSLGAFLS--LAVAGHS-GSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIG 130 (368)
T ss_dssp TTTEEEEEEEECTTC--EEEECTT-SSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEE
T ss_pred CCCeEEEEEeCCCCC--ceEECCC-CCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEE
Confidence 456667777655566 7999999 66666664 36889999999999999987541 3456899
Q ss_pred EeCCCCeEEEEcC--CCeEEE--EECCCCCcccccccccCCCcceeEEEEcCCC-CeEEEEeCCCcEEEEeCcC-----c
Q 017194 66 FKSGNEDIIYVSS--GKEVKS--FDVHMPASWRPLESYNYNKEEINQIVCNPKS-SFLACADDGGDVKIIDIRQ-----H 135 (375)
Q Consensus 66 ~~~~~~~l~~~~~--d~~i~i--wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~-----~ 135 (375)
++|||++++++.. +..+.+ +|..+ ...+.. .+. ..+.|++ ..+++.+.|+.+.+.|+++ +
T Consensus 131 ~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v----~~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~ 200 (368)
T 1mda_H 131 NCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS----ASC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAG 200 (368)
T ss_dssp ECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC----SSC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCE
T ss_pred EcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC----CCc---eEEccCCCeEEEEEcCCCCEEEEECccccccCC
Confidence 9999999998865 467888 88875 222221 111 1123444 3445556788888888876 4
Q ss_pred eeee----eEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCc--ceEEecCCCCCCCCCCcccCCCceeEEe
Q 017194 136 CLYK----SLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRP--NKIVNFGLPENNGNAGQCYNPAFVHAIA 209 (375)
Q Consensus 136 ~~~~----~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 209 (375)
+... .+. -...+. . .+++. .++..+. +.+.+.|+..... +..+.+.... .......+.....++
T Consensus 201 ~v~~~~t~~i~-vg~~P~---~-~~~~~-~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~---~~~~~~~p~g~~~v~ 270 (368)
T 1mda_H 201 IVGAQCTGAQN-CSSQAA---Q-ANYPG-MLVWAVA-SSILQGDIPAAGATMKAAIDGNESG---RKADNFRSAGFQMVA 270 (368)
T ss_dssp ECCCCSCTTSC-BCSCCE---E-ETTTT-EEEECBS-SCCEEEECCSSCCEEECCCCSSCTH---HHHTTEEECSSSCEE
T ss_pred eEEEEeeeeee-CCCCcc---c-cccCC-EEEEEcC-CEEEEEECCCCcceEEEEEEecccc---ccccccccCcceeeE
Confidence 4331 122 112232 3 66666 4555555 8999999865332 2222111000 000000111222367
Q ss_pred ecCCccccCCCCEEEEEec---------CCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCccee
Q 017194 210 IPDADMLDKTNKICVVAKG---------DGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRL 280 (375)
Q Consensus 210 ~~~~~~~~~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~ 280 (375)
++| +++.++++.. ++.+.++|+.+.+..
T Consensus 271 ~s~------dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv------------------------------------- 307 (368)
T 1mda_H 271 KLK------NTDGIMILTVEHSRSCLAAAENTSSVTASVGQTS------------------------------------- 307 (368)
T ss_dssp EET------TTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEE-------------------------------------
T ss_pred EcC------CCCEEEEEeccccCcccccCCCEEEEECCCCeEE-------------------------------------
Confidence 888 7888877643 235679999985332
Q ss_pred EeeeeecCCCccEEEEEEeecCCCCc-EEEEec-CCCeEEEEeCCCce
Q 017194 281 HLDYSVGGHTAAASCVAFSMFGERGK-YLISGG-NDKLVKVWDCSRFQ 326 (375)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~s~~~~~~~-~l~s~~-~dg~i~iwd~~~~~ 326 (375)
..+... .....++|+ |||+ ++++.. .++.|.++|+.+.+
T Consensus 308 ---~~i~vg-~~p~gi~~s---~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 308 ---GPISNG-HDSDAIIAA---QDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp ---ECCEEE-EEECEEEEC---CSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred ---EEEECC-CCcceEEEC---CCCCEEEEEccCCCCeEEEEECCCCc
Confidence 222211 257889999 8997 456666 58999999999984
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.35 E-value=6.4e-09 Score=83.53 Aligned_cols=223 Identities=8% Similarity=0.010 Sum_probs=138.2
Q ss_pred CceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEE-cCCCeEEEEECCCCCccc
Q 017194 16 ATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYV-SSGKEVKSFDVHMPASWR 94 (375)
Q Consensus 16 ~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~ 94 (375)
..+..++++++++.++++-..++.|..++.........+.........+++.+++..|+.+ ...+.|.++++.... ..
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~ 114 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RR 114 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EE
Confidence 3467899999745666666677899999987655433333223567899999976555544 456799999987432 12
Q ss_pred ccccccCCCcceeEEEEcCCCCeEEEEeC---CCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeE
Q 017194 95 PLESYNYNKEEINQIVCNPKSSFLACADD---GGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKL 171 (375)
Q Consensus 95 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i 171 (375)
.+.. ........++++|++..|+.+.. .+.|..+++... ....+..........++++|+++.++++-...+.|
T Consensus 115 ~~~~--~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I 191 (267)
T 1npe_A 115 VLFD--TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRA 191 (267)
T ss_dssp EEEC--SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEE--CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEE
Confidence 2211 11245688999997666666554 368888887543 33333212234678999999877566666677899
Q ss_pred EEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCC
Q 017194 172 VMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTK 251 (375)
Q Consensus 172 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 251 (375)
..+|+........+. . ......+++. ++.++++....+.|..+|..+++..........
T Consensus 192 ~~~~~~g~~~~~~~~-~-------------~~~P~gi~~d-------~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~ 250 (267)
T 1npe_A 192 ECLNPAQPGRRKVLE-G-------------LQYPFAVTSY-------GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQ 250 (267)
T ss_dssp EEEETTEEEEEEEEE-C-------------CCSEEEEEEE-------TTEEEEEETTTTEEEEEETTTTEEEEEECCSSC
T ss_pred EEEecCCCceEEEec-C-------------CCCceEEEEe-------CCEEEEEECCCCeEEEEeCCCCCceEEEccccc
Confidence 999987543322222 1 1233556653 244444444668999999988765554433222
Q ss_pred CCCCceeecccc
Q 017194 252 PLKGSQSTSKVN 263 (375)
Q Consensus 252 ~~~~~~~~s~~g 263 (375)
.....+++.|++
T Consensus 251 ~~p~gi~~~~~~ 262 (267)
T 1npe_A 251 TRLYGITIALSQ 262 (267)
T ss_dssp CCCCCEEEECSC
T ss_pred cccceeeecCcc
Confidence 234445555544
No 235
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.34 E-value=3.3e-10 Score=103.18 Aligned_cols=211 Identities=10% Similarity=0.040 Sum_probs=143.3
Q ss_pred CCcEEEEecccCceeeEeeecC-------------------------------ccEEEEEEeCCCCeEEEEcCCC-----
Q 017194 37 DGCICWFDLRSKDVQLVTDVGN-------------------------------GPVTSLCFKSGNEDIIYVSSGK----- 80 (375)
Q Consensus 37 d~~i~iw~~~~~~~~~~~~~~~-------------------------------~~v~~l~~~~~~~~l~~~~~d~----- 80 (375)
+|.|..||..+|+.+..+.... ..-..+++.|++..++.+..++
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 6899999999999877664210 0112578888888888888775
Q ss_pred --------------eEEEEECCCCCcccccccccC------CCcceeEEEEcCCCC---eEEEEeCCCcEEEEeCcCcee
Q 017194 81 --------------EVKSFDVHMPASWRPLESYNY------NKEEINQIVCNPKSS---FLACADDGGDVKIIDIRQHCL 137 (375)
Q Consensus 81 --------------~i~iwd~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~ 137 (375)
.|..+|.++++..-..+.... ...+........+++ .++.++.+|.++++|.++++.
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 399999999876544432110 011222222223554 788899999999999999988
Q ss_pred eeeEecCccc--------------------------------------ceeEEEEeeCCCcEEEEeec------------
Q 017194 138 YKSLRAGHSS--------------------------------------ICSSVQFIPWKPWEVISGGL------------ 167 (375)
Q Consensus 138 ~~~~~~~~~~--------------------------------------~v~~~~~~~~~~~~l~~~~~------------ 167 (375)
+......... .-..++|+|+.. ++++...
T Consensus 342 l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~ 420 (689)
T 1yiq_A 342 LSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTG-LVYIPAHIMSAYYEHIPEA 420 (689)
T ss_dssp EEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTT-EEEEEEEECCEEEECCSSC
T ss_pred eccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCC-EEEEeccccceeeeecccc
Confidence 7543311100 011368888877 5555421
Q ss_pred ---------------------------------CCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCc
Q 017194 168 ---------------------------------DSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDAD 214 (375)
Q Consensus 168 ---------------------------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 214 (375)
+|.|+.||+.+++.+..+..+ .....-.+..
T Consensus 421 ~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~--------------~~~~~g~~~t-- 484 (689)
T 1yiq_A 421 PKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYV--------------TIFNGGTLST-- 484 (689)
T ss_dssp CCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEES--------------SSCCCCEEEE--
T ss_pred ccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCC--------------CCccCccceE--
Confidence 378999999999998888754 2222223333
Q ss_pred cccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceee
Q 017194 215 MLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAE 268 (375)
Q Consensus 215 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~ 268 (375)
.+.+++.++.||.|+.||.++++.+.............+.++.+|++.+.
T Consensus 485 ----agglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 485 ----AGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp ----TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred ----CCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEE
Confidence 57899999999999999999999988777665555566778889886654
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.32 E-value=4.1e-10 Score=97.70 Aligned_cols=277 Identities=14% Similarity=0.049 Sum_probs=172.3
Q ss_pred EEEeCCCCcEEEEecccCceeeEeee---------------------------------c------CccEEEEEEeC---
Q 017194 31 VASSGEDGCICWFDLRSKDVQLVTDV---------------------------------G------NGPVTSLCFKS--- 68 (375)
Q Consensus 31 l~s~~~d~~i~iw~~~~~~~~~~~~~---------------------------------~------~~~v~~l~~~~--- 68 (375)
+.||+..|.++|+-+.+++.++.+.. + .+.......|.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 77889999999999888776554421 0 01122244443
Q ss_pred --CCCeEEEEcC-CCeEEEEECCCCCcccccccccCCCcceeEEEE-c-CCCCeEEEEe------------------CCC
Q 017194 69 --GNEDIIYVSS-GKEVKSFDVHMPASWRPLESYNYNKEEINQIVC-N-PKSSFLACAD------------------DGG 125 (375)
Q Consensus 69 --~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~l~~~~------------------~dg 125 (375)
||++++.... ++.|.+.|+.+.+..+.+. +.. ......+++ + |+++++++++ .++
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~-ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILE-IPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEE-CSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCceEeeEEe-CCC-CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 7887776655 4689999999876655442 221 245778887 5 8999998885 245
Q ss_pred cEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecC-------------------------------------
Q 017194 126 DVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLD------------------------------------- 168 (375)
Q Consensus 126 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------------------------------------- 168 (375)
.+.+.|.++.+...++.. .+....++++|+|++.++++...
T Consensus 176 ~vtvID~~t~~v~~qI~V--gg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLV--SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEEEEETTTTEEEEEEEE--SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred eEEEEECCCCeEEEEEEe--CCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 799999999998888872 22567788999999544444332
Q ss_pred CeEEEeeCCC--CCc-ceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe-cCCcEEEEeCCCcceee
Q 017194 169 SKLVMWDFSK--GRP-NKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK-GDGVVDVINIESELNIS 244 (375)
Q Consensus 169 ~~i~~wd~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~ 244 (375)
+.|.+.|.++ ++. +..+..+ ....++.++| ||+++++++ .+..|.++|+.+.+...
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg--------------~~PhGv~~sP------DGk~v~V~~~~s~~VsVid~~~~~~~~ 313 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIA--------------NNPHGCNMAP------DKKHLCVAGKLSPTVTVLDVTRFDAVF 313 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEE--------------SSCCCEEECT------TSSEEEEECTTSSBEEEEEGGGHHHHH
T ss_pred CcEEEEeCcccCCceeEEEEecC--------------CCceEEEEcC------CCCEEEEeCCCCCeEEEEECccccccc
Confidence 1356666665 333 3444433 4567889998 899887776 67899999999643211
Q ss_pred cccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCC
Q 017194 245 RSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSR 324 (375)
Q Consensus 245 ~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~ 324 (375)
.-. +.+. .....++.. ......++|+ ++|...++..-|+.|.+||+..
T Consensus 314 ~~~-----------l~~~-----------------~~v~~~v~v-G~gP~h~aF~---~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 314 YEN-----------ADPR-----------------SAVVAEPEL-GLGPLHTAFD---GRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp HSC-----------CCGG-----------------GGEEECCBC-CSCEEEEEEC---TTSEEEEEETTTTEEEEEEHHH
T ss_pred ccc-----------cCcc-----------------cceEEEcCC-CCCcceEEEC---CCCeEEEEEecCCcEEEEEhhH
Confidence 000 0000 011112221 3457889999 9995556677899999999887
Q ss_pred ceeee-ecchhhhhhhhcc-----cccceeeeeecCCCCCcEEEee
Q 017194 325 FQGVQ-TSINNDLLIKNIN-----LNKKVNWLCTTPTESENLVVCD 364 (375)
Q Consensus 325 ~~~~~-~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~s~~ 364 (375)
..... -....+.+..+.- |...-.++..+| ||++|+++.
T Consensus 362 a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~-DGk~l~~~N 406 (595)
T 1fwx_A 362 AIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDA-TNDWLVCLS 406 (595)
T ss_dssp HHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTC-CSSEEEEEE
T ss_pred hhhhhcccccceeEEEeecccccccceeccceEeCC-CCCEEEEcC
Confidence 31000 0000022223322 322233445677 999999875
No 237
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.29 E-value=1.2e-12 Score=110.26 Aligned_cols=180 Identities=12% Similarity=0.111 Sum_probs=100.9
Q ss_pred CCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCC
Q 017194 114 KSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENN 193 (375)
Q Consensus 114 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 193 (375)
++..+++++.||.|+.||..+++.+..+. . ..+.+..+..++. ++++++.|+.|+.||..+++.+..+....
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~-~--~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~~w~~~~~~---- 79 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLK-E--DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEGLTKLPFTI---- 79 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEE-C--CCSCCCC-----C-CEEECTTTCCEEEC-----CCSEECSCCH----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEec-C--CCceecceEcCCC-EEEEeCCCCEEEEEECCCCceeeeeeccC----
Confidence 56789999999999999999999998888 4 4555555666776 67888899999999999998877664320
Q ss_pred CCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeee
Q 017194 194 GNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILD 273 (375)
Q Consensus 194 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~ 273 (375)
+..+ ..+|.. ..+..+++++.++.|+.||..+++...
T Consensus 80 --------~~~~---~~sp~~---~~~~~v~~g~~dg~v~a~D~~tG~~~w----------------------------- 116 (369)
T 2hz6_A 80 --------PELV---QASPCR---SSDGILYMGKKQDIWYVIDLLTGEKQQ----------------------------- 116 (369)
T ss_dssp --------HHHH---TTCSCC--------CCCCEEEEEEEEECCC-----------------------------------
T ss_pred --------cccc---ccCceE---ecCCEEEEEeCCCEEEEEECCCCcEEE-----------------------------
Confidence 0111 111100 024567788889999999999864332
Q ss_pred cCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeec
Q 017194 274 QSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTT 353 (375)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 353 (375)
.+..+. ...++ |++..+++++.|+.|+.||..+++.. -....+ .....++.
T Consensus 117 -----------~~~~~~----~~~~~---p~~~~v~~~~~dg~v~a~d~~tG~~~---------W~~~~~--~~~~~~~~ 167 (369)
T 2hz6_A 117 -----------TLSSAF----ADSLS---PSTSLLYLGRTEYTITMYDTKTRELR---------WNATYF--DYAASLPE 167 (369)
T ss_dssp ----------------------------------EEEEEEEEEEECCCSSSSSCC---------CEEEEE--EECCBCCC
T ss_pred -----------EecCCC----ccccc---ccCCEEEEEecCCEEEEEECCCCCEE---------EeEecc--cccCcccc
Confidence 222221 12345 67788999999999999999998432 111111 11222232
Q ss_pred CCCC---CcEEEeeCCCeEEEEec
Q 017194 354 PTES---ENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 354 ~~~~---~~l~s~~~dg~v~iw~~ 374 (375)
. +. ..+++++.||.|+.||.
T Consensus 168 ~-~~~~~~~v~~~~~dg~v~a~d~ 190 (369)
T 2hz6_A 168 D-DVDYKMSHFVSNGDGLVVTVDS 190 (369)
T ss_dssp C-CTTCCCCEEEEETSCEEEEECT
T ss_pred C-CccccceEEEECCCCEEEEEEC
Confidence 2 21 46778888999999885
No 238
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.28 E-value=9.5e-11 Score=101.60 Aligned_cols=187 Identities=12% Similarity=0.069 Sum_probs=133.5
Q ss_pred CCCCEEE-EeCCCCcEEEEecccCceeeEeeec-CccEEEEEE-e-CCCCeEEEEc------------------CCCeEE
Q 017194 26 DRPGFVA-SSGEDGCICWFDLRSKDVQLVTDVG-NGPVTSLCF-K-SGNEDIIYVS------------------SGKEVK 83 (375)
Q Consensus 26 ~~~~~l~-s~~~d~~i~iw~~~~~~~~~~~~~~-~~~v~~l~~-~-~~~~~l~~~~------------------~d~~i~ 83 (375)
| |+++. +...+..|.+.|+.+.+..+.+... ...+..+++ + |+++++++++ .++.+.
T Consensus 100 D-G~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 D-GRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp E-EEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred C-CCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 6 55554 4455678999999999988855432 356788888 5 9999998884 235899
Q ss_pred EEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCC--------------------------------------
Q 017194 84 SFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGG-------------------------------------- 125 (375)
Q Consensus 84 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------------------------------------- 125 (375)
+.|.++.+....+.. .+....++++|+++++++.+.+.
T Consensus 179 vID~~t~~v~~qI~V----gg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 179 AVDADKWEVAWQVLV----SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEETTTTEEEEEEEE----SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred EEECCCCeEEEEEEe----CCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 999987654444433 12446678999999988887543
Q ss_pred cEEEEeCcC--cee-eeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCC------------cceEEecCCC
Q 017194 126 DVKIIDIRQ--HCL-YKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR------------PNKIVNFGLP 190 (375)
Q Consensus 126 ~i~iwd~~~--~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~------------~~~~~~~~~~ 190 (375)
.|.+.|.++ ++. +..+. -.....++.++|||+++++++..+.+|.++|+.+.+ ....+..+
T Consensus 255 ~V~VID~~~~~~~~~~~~Ip--vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-- 330 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIP--IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-- 330 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEE--EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC--
T ss_pred cEEEEeCcccCCceeEEEEe--cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC--
Confidence 467777776 444 44554 234567899999999777778889999999998653 22233322
Q ss_pred CCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCC
Q 017194 191 ENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIES 239 (375)
Q Consensus 191 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 239 (375)
.....++|+| +|...++...|++|.+||+.+
T Consensus 331 ------------~gP~h~aF~~------dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 331 ------------LGPLHTAFDG------RGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp ------------SCEEEEEECT------TSEEEEEETTTTEEEEEEHHH
T ss_pred ------------CCcceEEECC------CCeEEEEEecCCcEEEEEhhH
Confidence 5678999999 785555666899999999876
No 239
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.27 E-value=3.5e-09 Score=83.41 Aligned_cols=216 Identities=12% Similarity=0.013 Sum_probs=141.6
Q ss_pred CCeeeecCCC--ceeEEEEecCCCCEEEEeCC--CCcEEEEecccCceeeEeeecCc-cEEEEEEeCCCCeEEEE-cCCC
Q 017194 7 KPRRLRGHKA--TATCCIASRDRPGFVASSGE--DGCICWFDLRSKDVQLVTDVGNG-PVTSLCFKSGNEDIIYV-SSGK 80 (375)
Q Consensus 7 ~~~~l~~h~~--~i~~~~~~~~~~~~l~s~~~--d~~i~iw~~~~~~~~~~~~~~~~-~v~~l~~~~~~~~l~~~-~~d~ 80 (375)
.+.++. |.. ....++|+|+ +.++++.+. ++.|.++|+.+++.+..+..... ....+++. ++.|..+ -.++
T Consensus 11 vv~~~p-~~~~~f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~ 86 (266)
T 2iwa_A 11 VLNEFP-HDPYAFTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEE-CCTTCCEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCS
T ss_pred EEEEEE-CCCCCCcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCC
Confidence 344553 543 3578999998 666666553 57999999999999888764222 22345554 4455444 4578
Q ss_pred eEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcc----cceeEEEEee
Q 017194 81 EVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHS----SICSSVQFIP 156 (375)
Q Consensus 81 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----~~v~~~~~~~ 156 (375)
.+.++|..+.+....+..- .. ....+++|++.++++..++.|.++|..+.+.+..+..+.. ..++.+.|.
T Consensus 87 ~v~viD~~t~~v~~~i~~g---~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~- 160 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQ---MK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI- 160 (266)
T ss_dssp EEEEEETTTTEEEEEEECC---SS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred EEEEEECCCCcEEEEEECC---CC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-
Confidence 9999999976554444321 01 1233556888888877889999999999888887762211 136788888
Q ss_pred CCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCC-EEEEEecCCcEEEE
Q 017194 157 WKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNK-ICVVAKGDGVVDVI 235 (375)
Q Consensus 157 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~ 235 (375)
++. +++....++.|.+.|..+++.+..+....................+.|+++| +++ +++++...+.+.+.
T Consensus 161 dg~-lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~------~~~~lfVTgk~~~~v~~i 233 (266)
T 2iwa_A 161 NGE-VWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQ------ENKRIFVTGKLWPKLFEI 233 (266)
T ss_dssp TTE-EEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEET------TTTEEEEEETTCSEEEEE
T ss_pred CCE-EEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcC------CCCEEEEECCCCCeEEEE
Confidence 664 5666667889999999999999998753000000000000113568999999 555 55555577889888
Q ss_pred eCCC
Q 017194 236 NIES 239 (375)
Q Consensus 236 d~~~ 239 (375)
++..
T Consensus 234 ~l~~ 237 (266)
T 2iwa_A 234 KLHL 237 (266)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8875
No 240
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.26 E-value=5e-08 Score=78.26 Aligned_cols=186 Identities=8% Similarity=0.040 Sum_probs=114.0
Q ss_pred EEEEeCCCCcEEEEecccCcee-----eEeeecCccEEEEEEeCCCCeEEEE-cCCCeEEEEECCCCCcccccccccCCC
Q 017194 30 FVASSGEDGCICWFDLRSKDVQ-----LVTDVGNGPVTSLCFKSGNEDIIYV-SSGKEVKSFDVHMPASWRPLESYNYNK 103 (375)
Q Consensus 30 ~l~s~~~d~~i~iw~~~~~~~~-----~~~~~~~~~v~~l~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~ 103 (375)
+|+.+.. +.|+.+++...... ..+......+..++|++++..|+.+ ...+.|..+++..... ..+ .....
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~--~~~~~ 78 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-TTI--IRQDL 78 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-EEE--ECTTC
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc-EEE--EECCC
Confidence 4444443 47888887754421 1222223467899999976655554 4568999999875432 111 11112
Q ss_pred cceeEEEEcCCCCeEEEEe-CCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeec--CCeEEEeeCCCCC
Q 017194 104 EEINQIVCNPKSSFLACAD-DGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGL--DSKLVMWDFSKGR 180 (375)
Q Consensus 104 ~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--d~~i~~wd~~~~~ 180 (375)
.....+++++++..|+.+. ..+.|.++++.......... ........++++|++..++++... .+.|..+++.. +
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~-~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~ 156 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFD-TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-T 156 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-C
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEE-CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-C
Confidence 4678899999766655554 56789999986433222222 222467899999976634444433 46888888763 3
Q ss_pred cceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe-cCCcEEEEeCCC
Q 017194 181 PNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK-GDGVVDVINIES 239 (375)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~ 239 (375)
....+... .......++++| ++..|+++. ..+.|.++|+..
T Consensus 157 ~~~~~~~~------------~~~~P~gia~d~------~~~~lyv~d~~~~~I~~~~~~g 198 (267)
T 1npe_A 157 NRRILAQD------------NLGLPNGLTFDA------FSSQLCWVDAGTHRAECLNPAQ 198 (267)
T ss_dssp CCEEEECT------------TCSCEEEEEEET------TTTEEEEEETTTTEEEEEETTE
T ss_pred CcEEEEEC------------CCCCCcEEEEcC------CCCEEEEEECCCCEEEEEecCC
Confidence 33333211 124578899988 566655554 567899999874
No 241
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.25 E-value=1.6e-09 Score=90.05 Aligned_cols=218 Identities=9% Similarity=0.011 Sum_probs=141.6
Q ss_pred CEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeE
Q 017194 29 GFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQ 108 (375)
Q Consensus 29 ~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 108 (375)
..|..++.++.|..+|.. ++.......+...+.++...+++. +..++.++.|..+|.. ++...... .....+.+
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~---~~~~~~~~ 181 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFK---TNDAITSA 181 (330)
T ss_dssp TEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEE---CSSCCCSC
T ss_pred CEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEe---cCCCceee
Confidence 356677778899999988 777666665555666777777775 6667778999999987 54332222 22445677
Q ss_pred EEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecC
Q 017194 109 IVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFG 188 (375)
Q Consensus 109 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 188 (375)
+...+++.. ..++ +.|..+| .+++.+..+. .....+.++...+++. +..++.++.+..+|. +++.+..+...
T Consensus 182 ~~~d~~g~l-~v~t--~~l~~~d-~~g~~~~~~~-~~~~~~~~~~~~~~g~--l~v~t~~~gl~~~~~-~g~~~~~~~~~ 253 (330)
T 3hxj_A 182 ASIGKDGTI-YFGS--DKVYAIN-PDGTEKWNFY-AGYWTVTRPAISEDGT--IYVTSLDGHLYAINP-DGTEKWRFKTG 253 (330)
T ss_dssp CEECTTCCE-EEES--SSEEEEC-TTSCEEEEEC-CSSCCCSCCEECTTSC--EEEEETTTEEEEECT-TSCEEEEEECS
T ss_pred eEEcCCCEE-EEEe--CEEEEEC-CCCcEEEEEc-cCCcceeceEECCCCe--EEEEcCCCeEEEECC-CCCEeEEeeCC
Confidence 777777764 4444 7899999 6777766666 4556788888888874 677777888888874 56666555532
Q ss_pred CCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceee
Q 017194 189 LPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAE 268 (375)
Q Consensus 189 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~ 268 (375)
...+..+.+.+ +..|.+++.+|.|..+|. +++..
T Consensus 254 -------------~~~~~~~~~~~-------~g~l~v~t~~ggl~~~d~-~g~~~------------------------- 287 (330)
T 3hxj_A 254 -------------KRIESSPVIGN-------TDTIYFGSYDGHLYAINP-DGTEK------------------------- 287 (330)
T ss_dssp -------------SCCCSCCEECT-------TSCEEEECTTCEEEEECT-TSCEE-------------------------
T ss_pred -------------CCccccceEcC-------CCeEEEecCCCCEEEECC-CCcEE-------------------------
Confidence 12223344433 456777888888999986 33211
Q ss_pred eeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCc
Q 017194 269 MEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325 (375)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~ 325 (375)
..+......+.++... ++|+ |..++.+|.+++...+..
T Consensus 288 ---------------~~~~~~~~~~~~~~~d---~~g~-l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 288 ---------------WNFETGSWIIATPVID---ENGT-IYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp ---------------EEEECSSCCCSCCEEC---TTCC-EEEECTTSCEEEEEC---
T ss_pred ---------------EEEEcCCccccceEEc---CCCE-EEEEcCCCeEEEEecccc
Confidence 1111123345556665 5665 566888999998877664
No 242
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.22 E-value=1.9e-08 Score=79.27 Aligned_cols=206 Identities=8% Similarity=0.003 Sum_probs=131.7
Q ss_pred eeEEEEcCCCCeEEEEeC--CCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcce
Q 017194 106 INQIVCNPKSSFLACADD--GGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNK 183 (375)
Q Consensus 106 v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~ 183 (375)
...+.|++++.++++.+. ++.|+++|+.+++.+..+..+.......+++. ++.++++.-.++.+.++|..+.+.+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEE
Confidence 578999998644444433 57999999999999888762222233345554 44356666678999999999999988
Q ss_pred EEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccc
Q 017194 184 IVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVN 263 (375)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g 263 (375)
++..+. +. ...+++ +++.++++..++.|.++|..+.+.......
T Consensus 101 ~i~~g~------------~~---g~glt~------Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V--------------- 144 (266)
T 2iwa_A 101 NFTHQM------------KD---GWGLAT------DGKILYGSDGTSILYEIDPHTFKLIKKHNV--------------- 144 (266)
T ss_dssp EEECCS------------SS---CCEEEE------CSSSEEEECSSSEEEEECTTTCCEEEEEEC---------------
T ss_pred EEECCC------------CC---eEEEEE------CCCEEEEECCCCeEEEEECCCCcEEEEEEE---------------
Confidence 887430 11 123444 677777778889999999987543321110
Q ss_pred cceeeeeeeecCCcceeEeeeeecC-CCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhh--h
Q 017194 264 IRDAEMEILDQSGGKRLHLDYSVGG-HTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIK--N 340 (375)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--~ 340 (375)
...+ .-..++.+.|. +|+..+....++.|.+.|..+++.........+... .
T Consensus 145 ---------------------g~~~~p~~~~nele~~----dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~ 199 (266)
T 2iwa_A 145 ---------------------KYNGHRVIRLNELEYI----NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLID 199 (266)
T ss_dssp ---------------------EETTEECCCEEEEEEE----TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHH
T ss_pred ---------------------CCCCcccccceeEEEE----CCEEEEecCCCCeEEEEECCCCcEEEEEECCCccccccc
Confidence 0000 11236677776 677667776789999999999976543322111100 0
Q ss_pred c--ccccceeeeeecCCCCCcEEEeeCCCeEEEEec
Q 017194 341 I--NLNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 341 ~--~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
. .-....+.++++|...+.++++...+.|.+-++
T Consensus 200 ~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 200 EGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKL 235 (266)
T ss_dssp TTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred ccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence 1 112456899999933455666667788877664
No 243
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.21 E-value=6.8e-08 Score=79.84 Aligned_cols=242 Identities=8% Similarity=-0.038 Sum_probs=143.4
Q ss_pred CceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeee--------------------cCccEEEEEEeC-CCCeEE
Q 017194 16 ATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDV--------------------GNGPVTSLCFKS-GNEDII 74 (375)
Q Consensus 16 ~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~--------------------~~~~v~~l~~~~-~~~~l~ 74 (375)
....++++.++ ++++.++..++.|..|+..+++. ..+.. ....+..+++.+ +++ |+
T Consensus 19 ~~p~~i~~d~~-g~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~ 95 (322)
T 2fp8_A 19 YAPNSFTFDST-NKGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LY 95 (322)
T ss_dssp SCCCCEECCTT-CSSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EE
T ss_pred CCceEEEEcCC-CCEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EE
Confidence 34567889998 78777888889999999876543 22221 013578899997 665 55
Q ss_pred EEcCCCeEEEEECCCCCccccccc-ccC-CCcceeEEEEcC-CCCeEEEEeC-----------------CCcEEEEeCcC
Q 017194 75 YVSSGKEVKSFDVHMPASWRPLES-YNY-NKEEINQIVCNP-KSSFLACADD-----------------GGDVKIIDIRQ 134 (375)
Q Consensus 75 ~~~~d~~i~iwd~~~~~~~~~~~~-~~~-~~~~v~~~~~~~-~~~~l~~~~~-----------------dg~i~iwd~~~ 134 (375)
.+...+.|..+|..++.. ..+.. ..+ .......+++.+ ++++.++-.. ++.|..+|..+
T Consensus 96 v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 96 IVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 554455688888764321 22211 111 113467899999 8876665432 36788899876
Q ss_pred ceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCc--ceEEecCCCCCCCCCCcccCCCceeEEeecC
Q 017194 135 HCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRP--NKIVNFGLPENNGNAGQCYNPAFVHAIAIPD 212 (375)
Q Consensus 135 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 212 (375)
++...... .......++++|+++.++++-...+.|..|++..... ...+. . .+. ...+++.+
T Consensus 175 ~~~~~~~~--~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~-~------------~~g-P~gi~~d~ 238 (322)
T 2fp8_A 175 KETTLLLK--ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV-K------------IPN-PGNIKRNA 238 (322)
T ss_dssp TEEEEEEE--EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE-E------------CSS-EEEEEECT
T ss_pred CEEEEecc--CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE-e------------CCC-CCCeEECC
Confidence 65433222 2234578999999884445556678999999875321 11111 1 123 66788877
Q ss_pred CccccCCCCEEEEEec----------CCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEe
Q 017194 213 ADMLDKTNKICVVAKG----------DGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHL 282 (375)
Q Consensus 213 ~~~~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~ 282 (375)
+|++.++... .+.|..+|... +.+ ..
T Consensus 239 ------~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G------------------------~~~--------------~~ 274 (322)
T 2fp8_A 239 ------DGHFWVSSSEELDGNMHGRVDPKGIKFDEFG------------------------NIL--------------EV 274 (322)
T ss_dssp ------TSCEEEEEEEETTSSTTSCEEEEEEEECTTS------------------------CEE--------------EE
T ss_pred ------CCCEEEEecCcccccccCCCccEEEEECCCC------------------------CEE--------------EE
Confidence 6876655544 34566665532 111 11
Q ss_pred eeeecCC-CccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCc
Q 017194 283 DYSVGGH-TAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325 (375)
Q Consensus 283 ~~~~~~~-~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~ 325 (375)
+..-.+. ...+..+++. +++++++...++.|..+++...
T Consensus 275 ~~~~~g~~~~~~~~~~~~----~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 275 IPLPPPFAGEHFEQIQEH----DGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EECCTTTTTSCCCEEEEE----TTEEEEECSSCSEEEEEEC---
T ss_pred EECCCCCccccceEEEEe----CCEEEEeecCCCceEEEecccc
Confidence 1111111 2335556553 6777777777889999998764
No 244
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.20 E-value=2.3e-08 Score=77.77 Aligned_cols=193 Identities=12% Similarity=0.106 Sum_probs=125.0
Q ss_pred eeEEEEcCCCCeEEEEeCCC--cEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcce
Q 017194 106 INQIVCNPKSSFLACADDGG--DVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNK 183 (375)
Q Consensus 106 v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~ 183 (375)
...+.|+ ++.++.+.+.+| .|+++|+++++.+..+. . ..........++++.+++..-.++.+.+||..+.+.+.
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~-l-~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIE-L-GKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEE-C-CTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEe-c-CCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEE
Confidence 4678888 666666666665 89999999999998887 3 33444333334455355566678999999999999999
Q ss_pred EEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccc
Q 017194 184 IVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVN 263 (375)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g 263 (375)
++..+ ..-..++ + +++.|+.+..++.|.++|..+.+.......
T Consensus 122 ti~~~--------------~eG~glt--~------dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V--------------- 164 (262)
T 3nol_A 122 SFNYD--------------GEGWGLT--H------NDQYLIMSDGTPVLRFLDPESLTPVRTITV--------------- 164 (262)
T ss_dssp EEECS--------------SCCCCEE--E------CSSCEEECCSSSEEEEECTTTCSEEEEEEC---------------
T ss_pred EEECC--------------CCceEEe--c------CCCEEEEECCCCeEEEEcCCCCeEEEEEEe---------------
Confidence 99865 1112333 3 677788777788999999998543321110
Q ss_pred cceeeeeeeecCCcceeEeeeeecCC-CccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhh--
Q 017194 264 IRDAEMEILDQSGGKRLHLDYSVGGH-TAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKN-- 340 (375)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-- 340 (375)
...+. -..++.+.|. +|+..+..-.++.|.+.|.++++.........+....
T Consensus 165 ---------------------~~~g~~~~~lNELe~~----~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~ 219 (262)
T 3nol_A 165 ---------------------TAHGEELPELNELEWV----DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGP 219 (262)
T ss_dssp ---------------------EETTEECCCEEEEEEE----TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCS
T ss_pred ---------------------ccCCccccccceeEEE----CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCcccccc
Confidence 01111 1335567775 6777777767889999999999765433222221111
Q ss_pred -cccccceeeeeecCCCCCcEEEee
Q 017194 341 -INLNKKVNWLCTTPTESENLVVCD 364 (375)
Q Consensus 341 -~~~~~~v~~~~~~~~~~~~l~s~~ 364 (375)
..-....+.||+.| +++.|+..+
T Consensus 220 ~~~~~~vlNGIA~dp-~~~~lfVTG 243 (262)
T 3nol_A 220 LPSPIDVLNGIAWDK-EHHRLFVTG 243 (262)
T ss_dssp CCSSCCCEEEEEEET-TTTEEEEEE
T ss_pred ccCcCCceEEEEEcC-CCCEEEEEC
Confidence 11234678999999 555555444
No 245
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.20 E-value=7e-09 Score=80.62 Aligned_cols=198 Identities=11% Similarity=0.072 Sum_probs=130.9
Q ss_pred CCCc--eeEEEEecCCCCEEEEeCCCC--cEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEc-CCCeEEEEECC
Q 017194 14 HKAT--ATCCIASRDRPGFVASSGEDG--CICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVS-SGKEVKSFDVH 88 (375)
Q Consensus 14 h~~~--i~~~~~~~~~~~~l~s~~~d~--~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~d~~i~iwd~~ 88 (375)
|... ...+.|+ + +.++.+.+.+| .|+.+|+++++.+..+.... ........++++.|.... .++.+.++|.+
T Consensus 39 hd~~~ftqGL~~~-~-~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~ 115 (262)
T 3nol_A 39 HDTKAFTEGFFYR-N-GYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIR 115 (262)
T ss_dssp CCTTCEEEEEEEE-T-TEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred CCCCcccceEEEE-C-CEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECc
Confidence 5443 4778888 5 67777777766 89999999999988887533 333333333455555544 47899999999
Q ss_pred CCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCc-c---cceeEEEEeeCCCcEEEE
Q 017194 89 MPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGH-S---SICSSVQFIPWKPWEVIS 164 (375)
Q Consensus 89 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~---~~v~~~~~~~~~~~~l~~ 164 (375)
+.+....+..- . ....++++++.|+.+..++.|.++|..+.+.+..+.... . ..++.+.|. +|. +++.
T Consensus 116 t~~~~~ti~~~----~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-lyan 187 (262)
T 3nol_A 116 NLRQVRSFNYD----G--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE-IFAN 187 (262)
T ss_dssp TCCEEEEEECS----S--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE-EEEE
T ss_pred cCcEEEEEECC----C--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE-EEEE
Confidence 86655544431 1 222333577777777777889999999998888876211 1 234567776 665 6666
Q ss_pred eecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecC
Q 017194 165 GGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGD 229 (375)
Q Consensus 165 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~d 229 (375)
...+..|.+.|.++++.+..+....-..... .........+.||++| +++.|++.+..
T Consensus 188 ~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~-~~~~~~~vlNGIA~dp------~~~~lfVTGK~ 245 (262)
T 3nol_A 188 VWQTNKIVRIDPETGKVTGIIDLNGILAEAG-PLPSPIDVLNGIAWDK------EHHRLFVTGKL 245 (262)
T ss_dssp ETTSSEEEEECTTTCBEEEEEECTTGGGGSC-SCCSSCCCEEEEEEET------TTTEEEEEETT
T ss_pred EccCCeEEEEECCCCcEEEEEECCcCccccc-cccCcCCceEEEEEcC------CCCEEEEECCC
Confidence 6678899999999999999998641000000 0001124578999999 56666666543
No 246
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.18 E-value=3.9e-08 Score=75.80 Aligned_cols=194 Identities=10% Similarity=0.096 Sum_probs=124.8
Q ss_pred ceeEEEEcCCCCeEEEEeCC--CcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcc
Q 017194 105 EINQIVCNPKSSFLACADDG--GDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPN 182 (375)
Q Consensus 105 ~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~ 182 (375)
-...+.|++ +.++.+.+.+ ..|+.+|+++++.+..+. . ..........+.++.+++..-.++.+.+||..+.+.+
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~-l-~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAE-V-PPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEE-C-CTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEE
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEe-C-CCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEE
Confidence 456788886 5555555554 489999999999998887 3 2233333333344436666667899999999999999
Q ss_pred eEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeeccc
Q 017194 183 KIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKV 262 (375)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~ 262 (375)
.++..+ ..-..++ + +++.|+++..++.|.++|..+.+.......
T Consensus 99 ~ti~~~--------------~~Gwglt--~------dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V-------------- 142 (243)
T 3mbr_X 99 ARFRYP--------------GEGWALT--S------DDSHLYMSDGTAVIRKLDPDTLQQVGSIKV-------------- 142 (243)
T ss_dssp EEEECS--------------SCCCEEE--E------CSSCEEEECSSSEEEEECTTTCCEEEEEEC--------------
T ss_pred EEEeCC--------------CCceEEe--e------CCCEEEEECCCCeEEEEeCCCCeEEEEEEE--------------
Confidence 999865 2223444 3 577787778899999999998543321110
Q ss_pred ccceeeeeeeecCCcceeEeeeeecCC-CccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhh-
Q 017194 263 NIRDAEMEILDQSGGKRLHLDYSVGGH-TAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKN- 340 (375)
Q Consensus 263 g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~- 340 (375)
...+. -..++.+.+. +|+..+..-.+..|.+.|..+++.........+....
T Consensus 143 ----------------------~~~g~~~~~lNeLe~~----~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~ 196 (243)
T 3mbr_X 143 ----------------------TAGGRPLDNLNELEWV----NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDAD 196 (243)
T ss_dssp ----------------------EETTEECCCEEEEEEE----TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTT
T ss_pred ----------------------ccCCcccccceeeEEe----CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccc
Confidence 00110 1345667764 7777777667789999999999766433322222111
Q ss_pred ---cccccceeeeeecCCCCCcEEEe
Q 017194 341 ---INLNKKVNWLCTTPTESENLVVC 363 (375)
Q Consensus 341 ---~~~~~~v~~~~~~~~~~~~l~s~ 363 (375)
..-....+.|++.|...+++++|
T Consensus 197 ~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 197 ALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp SCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred cccCCcCCceEEEEEcCCCCEEEEEC
Confidence 11234678999999444455554
No 247
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.15 E-value=3.3e-08 Score=76.84 Aligned_cols=193 Identities=9% Similarity=0.011 Sum_probs=126.8
Q ss_pred eeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEE
Q 017194 106 INQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIV 185 (375)
Q Consensus 106 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 185 (375)
...+.|+ ++.++.+.+.+|.|+++|+++++.+..+. ........+++ +++.+++..-.++.+.+||..+.+.+.++
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l-~~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWMER-LGNIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEEE-CTTCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEEC-CCCcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcEEEEE
Confidence 4678887 35666777788899999999998887763 33222233554 44446666678899999999999999999
Q ss_pred ecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccc
Q 017194 186 NFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIR 265 (375)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~ 265 (375)
... ..-..++ + +++.|+.+..++.|.++|..+.+.......
T Consensus 133 ~~~--------------~eGwGLt--~------Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V----------------- 173 (268)
T 3nok_A 133 RYS--------------GEGWGLC--Y------WNGKLVRSDGGTMLTFHEPDGFALVGAVQV----------------- 173 (268)
T ss_dssp ECS--------------SCCCCEE--E------ETTEEEEECSSSEEEEECTTTCCEEEEEEC-----------------
T ss_pred eCC--------------CceeEEe--c------CCCEEEEECCCCEEEEEcCCCCeEEEEEEe-----------------
Confidence 854 2223344 3 578888888899999999998543322110
Q ss_pred eeeeeeeecCCcceeEeeeeecC-CCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhh----
Q 017194 266 DAEMEILDQSGGKRLHLDYSVGG-HTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKN---- 340 (375)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~---- 340 (375)
...+ .-..++.+.|. +|++.+..-.++.|.+.|.++++......-..+....
T Consensus 174 -------------------~~~g~~v~~lNeLe~~----dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~ 230 (268)
T 3nok_A 174 -------------------KLRGQPVELINELECA----NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQV 230 (268)
T ss_dssp -------------------EETTEECCCEEEEEEE----TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTC
T ss_pred -------------------CCCCcccccccccEEe----CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccc
Confidence 0011 11245677775 7777776667889999999999766443333222111
Q ss_pred cccccceeeeeecCCCCCcEEEee
Q 017194 341 INLNKKVNWLCTTPTESENLVVCD 364 (375)
Q Consensus 341 ~~~~~~v~~~~~~~~~~~~l~s~~ 364 (375)
..-....+.|++.|...++++||-
T Consensus 231 ~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 231 TNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp CCTTCCEEEEEECTTTCCEEEEET
T ss_pred cCcCCceEEEEEcCCCCEEEEeCC
Confidence 112346799999994455555553
No 248
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.14 E-value=3.1e-08 Score=77.02 Aligned_cols=190 Identities=11% Similarity=0.041 Sum_probs=126.7
Q ss_pred eeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEE-EcCCCeEEEEECCCCCccccc
Q 017194 18 ATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIY-VSSGKEVKSFDVHMPASWRPL 96 (375)
Q Consensus 18 i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~-~~~d~~i~iwd~~~~~~~~~~ 96 (375)
...+.|+. +.++.+.+.+|.|+++|+++++.+..+ ... ........++++.|.. .-.++.+.+||.++.+....+
T Consensus 57 tqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 57 TQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-RLG-NIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp EEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-ECT-TCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred cceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-CCC-CcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEE
Confidence 46788873 578888889999999999999998877 433 3333222334444444 445789999999986655544
Q ss_pred ccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecC-cc---cceeEEEEeeCCCcEEEEeecCCeEE
Q 017194 97 ESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAG-HS---SICSSVQFIPWKPWEVISGGLDSKLV 172 (375)
Q Consensus 97 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~---~~v~~~~~~~~~~~~l~~~~~d~~i~ 172 (375)
.. ...-..++ ++++.|+.+..++.|.++|.++.+.+..+... +. ..++.+.|. +|. +++....+..|.
T Consensus 133 ~~----~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~-lyanvw~s~~I~ 204 (268)
T 3nok_A 133 RY----SGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV-IYANIWHSSDVL 204 (268)
T ss_dssp EC----SSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTCSEEE
T ss_pred eC----CCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE-EEEEECCCCeEE
Confidence 43 12223344 56788888878899999999999988887621 11 245677877 665 666666788999
Q ss_pred EeeCCCCCcceEEecCC--CCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe
Q 017194 173 MWDFSKGRPNKIVNFGL--PENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK 227 (375)
Q Consensus 173 ~wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~ 227 (375)
+.|.++++.+..+.+.. +... ....-.....+.||++| +++.|++.+
T Consensus 205 vIDp~TG~V~~~Idl~~L~~~~~--~~~~~~~~vlNGIA~dp------~~~rlfVTG 253 (268)
T 3nok_A 205 EIDPATGTVVGVIDASALTRAVA--GQVTNPEAVLNGIAVEP------GSGRIFMTG 253 (268)
T ss_dssp EECTTTCBEEEEEECHHHHHHHT--TTCCCTTCCEEEEEECT------TTCCEEEEE
T ss_pred EEeCCCCcEEEEEECCCCccccc--ccccCcCCceEEEEEcC------CCCEEEEeC
Confidence 99999999999988641 0000 00000124678999998 455555444
No 249
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.13 E-value=2e-08 Score=91.27 Aligned_cols=202 Identities=11% Similarity=0.037 Sum_probs=124.9
Q ss_pred CEEEEeCCCCcEEEEecccCceeeEeeecCcc----------E-EEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccc
Q 017194 29 GFVASSGEDGCICWFDLRSKDVQLVTDVGNGP----------V-TSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLE 97 (375)
Q Consensus 29 ~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~----------v-~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 97 (375)
..|+.++.++.|.-+|..+|+.+..+...... + ..+.+ .+..++.++.|+.|..+|.++++..-...
T Consensus 67 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 144 (668)
T 1kv9_A 67 GVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQQ 144 (668)
T ss_dssp TEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeeec
Confidence 45666777889999999999988776543211 0 11222 24568888889999999999987654433
Q ss_pred cccCC-CcceeEEEEcC--CCCeEEEEeC------CCcEEEEeCcCceeeeeEecCc--c--------------------
Q 017194 98 SYNYN-KEEINQIVCNP--KSSFLACADD------GGDVKIIDIRQHCLYKSLRAGH--S-------------------- 146 (375)
Q Consensus 98 ~~~~~-~~~v~~~~~~~--~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~--~-------------------- 146 (375)
..... ...+. .+| .+..++++.. +|.|..+|.++++.+..+.... .
T Consensus 145 ~~~~~~~~~~~---~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 221 (668)
T 1kv9_A 145 TTDPAKPYSIT---GAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQ 221 (668)
T ss_dssp CSCTTSSCBCC---SCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSC
T ss_pred cCCCCCcceec---CCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccc
Confidence 21100 01111 111 1335555543 5899999999999987775110 0
Q ss_pred --------cceeEEEEeeCCCcEEEEeecCC-------------------eEEEeeCCCCCcceEEecCCCCCCCCCCcc
Q 017194 147 --------SICSSVQFIPWKPWEVISGGLDS-------------------KLVMWDFSKGRPNKIVNFGLPENNGNAGQC 199 (375)
Q Consensus 147 --------~~v~~~~~~~~~~~~l~~~~~d~-------------------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 199 (375)
.....+++.|+.. +++.++.++ .|..+|.++++.+..++....+.- ...
T Consensus 222 ~w~~~~gg~~w~~~a~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~w---d~~ 297 (668)
T 1kv9_A 222 YWKLGGGGTVWDSMAYDPELD-LLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSW---DFT 297 (668)
T ss_dssp HHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCS---CCC
T ss_pred eeeeCCCCccccceEEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccc---ccc
Confidence 0112467888777 677777665 499999999999988875310000 000
Q ss_pred cCCCceeEEeecCCccccCCCC---EEEEEecCCcEEEEeCCCcceeecc
Q 017194 200 YNPAFVHAIAIPDADMLDKTNK---ICVVAKGDGVVDVINIESELNISRS 246 (375)
Q Consensus 200 ~~~~~v~~~~~~~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~ 246 (375)
...+.....+.. +++ .+++++.+|.++++|..+++.+...
T Consensus 298 -~~~~~~~~d~~~------~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~ 340 (668)
T 1kv9_A 298 -ATQQITLAELNI------DGKPRKVLMQAPKNGFFYVLDRTNGKLISAE 340 (668)
T ss_dssp -CCSCEEEEEEEE------TTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred -CCCCcEEEEecc------CCcEEEEEEEECCCCEEEEEECCCCCEeccc
Confidence 011111112211 454 6889999999999999998876543
No 250
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.10 E-value=6.3e-08 Score=80.02 Aligned_cols=238 Identities=10% Similarity=-0.025 Sum_probs=142.1
Q ss_pred ccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCccccccccc-----------------CCCcceeEEEEcC-CCCeEEE
Q 017194 59 GPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYN-----------------YNKEEINQIVCNP-KSSFLAC 120 (375)
Q Consensus 59 ~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-----------------~~~~~v~~~~~~~-~~~~l~~ 120 (375)
....+++|.++++.++++..++.|..|+..++.. ..+.... .....+..+++.+ ++ .|++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~v 96 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLYI 96 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCC-cEEE
Confidence 3456788999998788888889999998875432 1111000 0013467899998 55 5555
Q ss_pred EeCCCcEEEEeCcCceeeeeEec---C-cccceeEEEEee-CCCcEEEEeec-----------------CCeEEEeeCCC
Q 017194 121 ADDGGDVKIIDIRQHCLYKSLRA---G-HSSICSSVQFIP-WKPWEVISGGL-----------------DSKLVMWDFSK 178 (375)
Q Consensus 121 ~~~dg~i~iwd~~~~~~~~~~~~---~-~~~~v~~~~~~~-~~~~~l~~~~~-----------------d~~i~~wd~~~ 178 (375)
+...+.|..+|..+++. ..+.. + .......+++.+ +|. ++++-.. ++.|..||..+
T Consensus 97 ~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 55555688898765532 22220 1 113468899999 886 5555322 36788898876
Q ss_pred CCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEE-ecCCcEEEEeCCCcceeecccccCCCCCCce
Q 017194 179 GRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVA-KGDGVVDVINIESELNISRSKSTTKPLKGSQ 257 (375)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 257 (375)
++...... . ......++++| +++.|+++ +..+.|..|++.....
T Consensus 175 ~~~~~~~~-~-------------~~~p~gia~~~------dg~~lyv~d~~~~~I~~~~~~~~~~--------------- 219 (322)
T 2fp8_A 175 KETTLLLK-E-------------LHVPGGAEVSA------DSSFVLVAEFLSHQIVKYWLEGPKK--------------- 219 (322)
T ss_dssp TEEEEEEE-E-------------ESCCCEEEECT------TSSEEEEEEGGGTEEEEEESSSTTT---------------
T ss_pred CEEEEecc-C-------------CccCcceEECC------CCCEEEEEeCCCCeEEEEECCCCcC---------------
Confidence 65332222 1 13456789988 78866666 5568999999875210
Q ss_pred eecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecC----------CCeEEEEeCCCcee
Q 017194 258 STSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGN----------DKLVKVWDCSRFQG 327 (375)
Q Consensus 258 ~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~ 327 (375)
...+....+. . ...+++. ++|++.++... .+.|..+|.. ++.
T Consensus 220 --------------------~~~~~~~~~~---g-P~gi~~d---~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~ 271 (322)
T 2fp8_A 220 --------------------GTAEVLVKIP---N-PGNIKRN---ADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNI 271 (322)
T ss_dssp --------------------TCEEEEEECS---S-EEEEEEC---TTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCE
T ss_pred --------------------CccceEEeCC---C-CCCeEEC---CCCCEEEEecCcccccccCCCccEEEEECCC-CCE
Confidence 0011111221 2 5678888 88887666544 4678888865 322
Q ss_pred eeecchhhhhhhhccc----ccceeeeeecCCCCCcEEEeeCCCeEEEEec
Q 017194 328 VQTSINNDLLIKNINL----NKKVNWLCTTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 328 ~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
+..+... ...+..+++ . +++++++....+.|..+++
T Consensus 272 ---------~~~~~~~~g~~~~~~~~~~~-~-~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 272 ---------LEVIPLPPPFAGEHFEQIQE-H-DGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp ---------EEEEECCTTTTTSCCCEEEE-E-TTEEEEECSSCSEEEEEEC
T ss_pred ---------EEEEECCCCCccccceEEEE-e-CCEEEEeecCCCceEEEec
Confidence 1111111 234555555 3 6666666667788988876
No 251
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.08 E-value=5.3e-07 Score=70.61 Aligned_cols=215 Identities=8% Similarity=0.026 Sum_probs=141.8
Q ss_pred eeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeec-CccEEEEEEeCCCCeEEEEcCCCeEEEEECC
Q 017194 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVG-NGPVTSLCFKSGNEDIIYVSSGKEVKSFDVH 88 (375)
Q Consensus 10 ~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~ 88 (375)
.+.+-.+.+..++|+|+++.++++...++.|...|.. ++.+..+... ......|++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 4555567899999999855666667788999999988 8877776532 3567888999888776766667899999886
Q ss_pred CCCcccccccc------cCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcC---ceeeeeEe------cCcccceeEEE
Q 017194 89 MPASWRPLESY------NYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQ---HCLYKSLR------AGHSSICSSVQ 153 (375)
Q Consensus 89 ~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---~~~~~~~~------~~~~~~v~~~~ 153 (375)
.......+... .........++|+|.++.|+++.+.....+|.++. ...+..+. ..+...+.+++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 54421111111 12345678999999988877777665556665541 11222221 01234578999
Q ss_pred EeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEE
Q 017194 154 FIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVD 233 (375)
Q Consensus 154 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 233 (375)
++|....+++.......+..+|.. ++.+..+.+.... ......-.....|+|.+ +|++.++ ++.+.++
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~----~~l~~~~~qpEGia~d~------~G~lyIv-sE~n~~y 247 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGS----RGLSHNIKQAEGVAMDA------SGNIYIV-SEPNRFY 247 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTG----GGCSSCCCSEEEEEECT------TCCEEEE-ETTTEEE
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCcc----CCcccccCCCCeeEECC------CCCEEEE-cCCceEE
Confidence 999887677777888899999966 6677776654100 00000123568899988 7875555 6667777
Q ss_pred EEeC
Q 017194 234 VINI 237 (375)
Q Consensus 234 i~d~ 237 (375)
.|.-
T Consensus 248 ~f~~ 251 (255)
T 3qqz_A 248 RFTP 251 (255)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 6654
No 252
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.08 E-value=1.1e-07 Score=86.41 Aligned_cols=159 Identities=11% Similarity=0.048 Sum_probs=104.1
Q ss_pred CCEEEEeCCCCcEEEEecccCceeeEeeecC----ccEEE-EEEeCCCCeEEEEcC------CCeEEEEECCCCCccccc
Q 017194 28 PGFVASSGEDGCICWFDLRSKDVQLVTDVGN----GPVTS-LCFKSGNEDIIYVSS------GKEVKSFDVHMPASWRPL 96 (375)
Q Consensus 28 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~----~~v~~-l~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~ 96 (375)
+..++.++.|+.|..+|..+|+.+....... ..+.+ ... .++ .++++.. ++.|..+|.++++..-..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV-VKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE-ECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 3467788889999999999999887765421 11111 111 134 4555443 589999999988765433
Q ss_pred ccccC----------------------------CCcceeEEEEcCCCCeEEEEeCCC-------------------cEEE
Q 017194 97 ESYNY----------------------------NKEEINQIVCNPKSSFLACADDGG-------------------DVKI 129 (375)
Q Consensus 97 ~~~~~----------------------------~~~~v~~~~~~~~~~~l~~~~~dg-------------------~i~i 129 (375)
..... +......+++.|+...++.+..++ .|..
T Consensus 195 ~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~A 274 (668)
T 1kv9_A 195 YTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILA 274 (668)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred cccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 32110 011123478888888888887766 3999
Q ss_pred EeCcCceeeeeEecC-cc-------cceeEEEEeeCCC--cEEEEeecCCeEEEeeCCCCCcceEEecC
Q 017194 130 IDIRQHCLYKSLRAG-HS-------SICSSVQFIPWKP--WEVISGGLDSKLVMWDFSKGRPNKIVNFG 188 (375)
Q Consensus 130 wd~~~~~~~~~~~~~-~~-------~~v~~~~~~~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 188 (375)
+|.++++.+-.++.. |. .+.....+..+++ ..++.++.+|.++++|..+|+.+......
T Consensus 275 lD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~ 343 (668)
T 1kv9_A 275 IRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFG 343 (668)
T ss_dssp ECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESS
T ss_pred EcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccc
Confidence 999999998887722 22 2222223334553 25888999999999999999988666543
No 253
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.08 E-value=1.8e-06 Score=80.60 Aligned_cols=292 Identities=9% Similarity=0.059 Sum_probs=171.6
Q ss_pred CCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeee-------cCccEEEEEEeCCCCeEEEEcCCCeEEEEEC
Q 017194 15 KATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDV-------GNGPVTSLCFKSGNEDIIYVSSGKEVKSFDV 87 (375)
Q Consensus 15 ~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~-------~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~ 87 (375)
...|.++...++ +.+.+ |..++-|.+||..+++....... ....|.++...++|.. ..|+.+ -|.+|+.
T Consensus 214 ~~~i~~i~~d~~-g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~l-Wigt~~-Gl~~~~~ 289 (795)
T 4a2l_A 214 TKQIQAILQQSP-TRIWV-ATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRL-WIGTFN-DLNIYHE 289 (795)
T ss_dssp CCCEEEEEEEET-TEEEE-EEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCE-EEEESS-CEEEEET
T ss_pred CCeeEEEEEcCC-CCEEE-EECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCE-EEEeCC-hhheEcC
Confidence 456888888776 55444 44333488899877654332211 1357999999888874 445545 5889998
Q ss_pred CCCCccccccc-----ccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEec------CcccceeEEEEee
Q 017194 88 HMPASWRPLES-----YNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRA------GHSSICSSVQFIP 156 (375)
Q Consensus 88 ~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------~~~~~v~~~~~~~ 156 (375)
.++.. ..+.. .......|.++...++|. |..|+.++-|..++..++.. ..+.. .....|.++...+
T Consensus 290 ~~~~~-~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~l~~~~V~~i~~d~ 366 (795)
T 4a2l_A 290 GTDSF-ASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRF-KNIRNIPYKNSLSDNVVSCIVEDK 366 (795)
T ss_dssp TTTEE-EEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSS-EEECCCTTSSSCSCSSEEEEEECT
T ss_pred CCCeE-EEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccc-eEEcCCCCCCCCCCCeeEEEEECC
Confidence 75432 11111 111245799999988885 55677777799998765532 22220 1234688998888
Q ss_pred CCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEe
Q 017194 157 WKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVIN 236 (375)
Q Consensus 157 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d 236 (375)
+|. |..|+.++-|..||..+++.. .+...... .........|.++...+ ++++|.+|+.++-|..||
T Consensus 367 ~g~--lWiGt~~~Gl~~~~~~~~~~~-~~~~~~~~----~~~~l~~~~v~~i~~d~------~g~~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 367 DKN--LWIGTNDGGLNLYNPITQRFT-SYTLQEDE----SARGIGSNNIKAVYVDE------KKSLVYIGTHAGGLSILH 433 (795)
T ss_dssp TSC--EEEEESSSCEEEECTTTCCEE-EECCC----------CCSCSCEEEEEEET------TTTEEEEEETTTEEEEEE
T ss_pred CCC--EEEEECCCCeEEEcCCCCcEE-EEecCCCC----cccCCCCccEEEEEEcC------CCCEEEEEeCcCceeEEe
Confidence 875 777888878999998765432 22211000 00001235688888876 576577788877899999
Q ss_pred CCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCe
Q 017194 237 IESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKL 316 (375)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~ 316 (375)
..+++....... .-......|.++... ++|.+.+... + -
T Consensus 434 ~~~~~~~~~~~~------------------------------------~~~l~~~~v~~i~~d---~~g~lwigt~-~-G 472 (795)
T 4a2l_A 434 RNSGQVENFNQR------------------------------------NSQLVNENVYAILPD---GEGNLWLGTL-S-A 472 (795)
T ss_dssp TTTCCEEEECTT------------------------------------TSCCSCSCEEEEEEC---SSSCEEEEES-S-C
T ss_pred CCCCcEEEeecC------------------------------------CCCcCCCeeEEEEEC---CCCCEEEEec-C-c
Confidence 886432111000 000124568888887 7787655544 4 4
Q ss_pred EEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEe
Q 017194 317 VKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYS 373 (375)
Q Consensus 317 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~ 373 (375)
|.+||..+++....... .....-....|.++...+ +|++.+.. .+ .|..|+
T Consensus 473 l~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~i~~d~-~g~lWigt-~~-Gl~~~~ 523 (795)
T 4a2l_A 473 LVRFNPEQRSFTTIEKE---KDGTPVVSKQITTLFRDS-HKRLWIGG-EE-GLSVFK 523 (795)
T ss_dssp EEEEETTTTEEEECCBC---TTCCBCCCCCEEEEEECT-TCCEEEEE-SS-CEEEEE
T ss_pred eeEEeCCCCeEEEcccc---ccccccCCceEEEEEECC-CCCEEEEe-CC-ceEEEe
Confidence 88999887643210000 000011235688888877 77655544 33 466665
No 254
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.06 E-value=2.4e-06 Score=79.71 Aligned_cols=292 Identities=10% Similarity=0.038 Sum_probs=170.6
Q ss_pred eeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEe-eecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCccccc
Q 017194 18 ATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVT-DVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPL 96 (375)
Q Consensus 18 i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 96 (375)
|.++...++ +.+.+ +..++-|..|+..+++..... ..+...|.++...+++... .++.++-+..||..+++. ..+
T Consensus 175 i~~i~~d~~-g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lw-igt~~~Gl~~~~~~~~~~-~~~ 250 (795)
T 4a2l_A 175 IASTLYRQG-DQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIW-VATEGAGLFLINPKTKEI-KNY 250 (795)
T ss_dssp CEEEEEEET-TEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEE-EEEBSSCEEEEETTTTEE-EEE
T ss_pred eEEEEECCC-CCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEE-EEECCCCeEEEeCCCCeE-EEe
Confidence 888888877 55444 555445888998776643321 1235678888888877644 455454588999876432 111
Q ss_pred ccc-----cCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEec------CcccceeEEEEeeCCCcEEEEe
Q 017194 97 ESY-----NYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRA------GHSSICSSVQFIPWKPWEVISG 165 (375)
Q Consensus 97 ~~~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~~~ 165 (375)
... ......|.++...+++.+. .|+.+ -|.+||..+++....... .....|.++...++|. +..|
T Consensus 251 ~~~~~~~~~l~~~~i~~i~~d~~g~lW-igt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~--lWig 326 (795)
T 4a2l_A 251 LHSPSNPKSISSNYIRSLAMDSQNRLW-IGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG--MWLG 326 (795)
T ss_dssp CCCTTCTTSCSCSBEEEEEECTTSCEE-EEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC--EEEE
T ss_pred ecCCCCccccCCCeEEEEEEcCCCCEE-EEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC--EEEE
Confidence 110 1124569999988888654 45455 588999876654322110 1235789999888885 7788
Q ss_pred ecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeec
Q 017194 166 GLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISR 245 (375)
Q Consensus 166 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 245 (375)
+.++-|..|+..++.. ..+... +. ........|.++...+ ++. |.+|+.++-|..||..+......
T Consensus 327 t~~~Gl~~~~~~~~~~-~~~~~~-~~-----~~~l~~~~V~~i~~d~------~g~-lWiGt~~~Gl~~~~~~~~~~~~~ 392 (795)
T 4a2l_A 327 TYFGGLNYYHPIRNRF-KNIRNI-PY-----KNSLSDNVVSCIVEDK------DKN-LWIGTNDGGLNLYNPITQRFTSY 392 (795)
T ss_dssp ESSSCEEEECGGGGSS-EEECCC-TT-----SSSCSCSSEEEEEECT------TSC-EEEEESSSCEEEECTTTCCEEEE
T ss_pred ECCCCeEEeCCCcccc-eEEcCC-CC-----CCCCCCCeeEEEEECC------CCC-EEEEECCCCeEEEcCCCCcEEEE
Confidence 8888899998765432 233211 00 0111235688888876 454 66678777899999876421110
Q ss_pred ccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCc
Q 017194 246 SKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325 (375)
Q Consensus 246 ~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~ 325 (375)
.... .. ....-....|.++... ++|++|..|+.++-|..||..++
T Consensus 393 ~~~~-------------------------------~~-~~~~l~~~~v~~i~~d---~~g~~lWigt~~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 393 TLQE-------------------------------DE-SARGIGSNNIKAVYVD---EKKSLVYIGTHAGGLSILHRNSG 437 (795)
T ss_dssp CCC--------------------------------------CCSCSCEEEEEEE---TTTTEEEEEETTTEEEEEETTTC
T ss_pred ecCC-------------------------------CC-cccCCCCccEEEEEEc---CCCCEEEEEeCcCceeEEeCCCC
Confidence 0000 00 0000123568999888 78874666677677999998876
Q ss_pred eeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEec
Q 017194 326 QGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 374 (375)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~~ 374 (375)
+...-... ........|.++...+ ++++.+.. .+ .|.+|+.
T Consensus 438 ~~~~~~~~-----~~~l~~~~v~~i~~d~-~g~lwigt-~~-Gl~~~~~ 478 (795)
T 4a2l_A 438 QVENFNQR-----NSQLVNENVYAILPDG-EGNLWLGT-LS-ALVRFNP 478 (795)
T ss_dssp CEEEECTT-----TSCCSCSCEEEEEECS-SSCEEEEE-SS-CEEEEET
T ss_pred cEEEeecC-----CCCcCCCeeEEEEECC-CCCEEEEe-cC-ceeEEeC
Confidence 43211000 0012345688888776 66644443 34 4666653
No 255
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.05 E-value=4.9e-07 Score=69.71 Aligned_cols=199 Identities=13% Similarity=0.078 Sum_probs=128.0
Q ss_pred cCCCc--eeEEEEecCCCCEEEEeCCC--CcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEE-EcCCCeEEEEEC
Q 017194 13 GHKAT--ATCCIASRDRPGFVASSGED--GCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIY-VSSGKEVKSFDV 87 (375)
Q Consensus 13 ~h~~~--i~~~~~~~~~~~~l~s~~~d--~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~-~~~d~~i~iwd~ 87 (375)
.|... ...+.|++ +.++.+.+.+ ..|+.+|+++++.+..+..... .......+.++.|.. .-.++.+.++|.
T Consensus 16 phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~v~v~D~ 92 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHEGFVYDL 92 (243)
T ss_dssp ECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSEEEEEET
T ss_pred CCCCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCEEEEEEC
Confidence 45543 56889985 4667777765 4899999999999888765332 222222223444444 445789999999
Q ss_pred CCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecC-cc---cceeEEEEeeCCCcEEE
Q 017194 88 HMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAG-HS---SICSSVQFIPWKPWEVI 163 (375)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~---~~v~~~~~~~~~~~~l~ 163 (375)
++.+....+..- . .=..+ .+++..|+.+..++.|.++|..+.+.+.++... +. ..++.+.+. +|. +++
T Consensus 93 ~tl~~~~ti~~~---~-~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~-lya 164 (243)
T 3mbr_X 93 ATLTPRARFRYP---G-EGWAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE-LLA 164 (243)
T ss_dssp TTTEEEEEEECS---S-CCCEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEE
T ss_pred CcCcEEEEEeCC---C-CceEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE-EEE
Confidence 876554444321 1 22334 356777777777899999999999888887621 11 245667766 554 566
Q ss_pred EeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEec
Q 017194 164 SGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKG 228 (375)
Q Consensus 164 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~ 228 (375)
....+..|.+.|.++++.+..+.+..-...............+.|+++| +++.|++.+.
T Consensus 165 nvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~------~~~~lfVTGK 223 (243)
T 3mbr_X 165 NVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDA------EHDRLFVTGK 223 (243)
T ss_dssp EETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEET------TTTEEEEEET
T ss_pred EECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcC------CCCEEEEECC
Confidence 6657889999999999999999865110000000001234678999999 5565555543
No 256
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.04 E-value=9.8e-08 Score=84.96 Aligned_cols=159 Identities=9% Similarity=0.023 Sum_probs=99.7
Q ss_pred CCEEEEeCCCCcEEEEecccCceeeEeeecCc----cEEE-EEEeCCCCeEEEEcC------CCeEEEEECCCCCccccc
Q 017194 28 PGFVASSGEDGCICWFDLRSKDVQLVTDVGNG----PVTS-LCFKSGNEDIIYVSS------GKEVKSFDVHMPASWRPL 96 (375)
Q Consensus 28 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~----~v~~-l~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~ 96 (375)
+..++.++.|+.|..+|..+|+.+........ .+.+ .... ++ .+++++. ++.|..+|.++++..-..
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 35677788899999999999998776653210 1211 1111 34 4555554 789999999988754332
Q ss_pred ccccCC----------------------------------Cc-ceeEEEEcCCCCeEEEEeCC----------------C
Q 017194 97 ESYNYN----------------------------------KE-EINQIVCNPKSSFLACADDG----------------G 125 (375)
Q Consensus 97 ~~~~~~----------------------------------~~-~v~~~~~~~~~~~l~~~~~d----------------g 125 (375)
...... .. ....+++.++...++.+..+ +
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 221100 00 01235666766677776532 3
Q ss_pred cEEEEeCcCceeeeeEecC-ccc----ceeE---EEEeeCCC--cEEEEeecCCeEEEeeCCCCCcceEEecC
Q 017194 126 DVKIIDIRQHCLYKSLRAG-HSS----ICSS---VQFIPWKP--WEVISGGLDSKLVMWDFSKGRPNKIVNFG 188 (375)
Q Consensus 126 ~i~iwd~~~~~~~~~~~~~-~~~----~v~~---~~~~~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 188 (375)
.|..+|.++++.+-.++.. |.. .+.. +...++|+ .+++.++.+|.+.++|..+++.+......
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~ 345 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVD 345 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeeccc
Confidence 5999999999998877622 110 1111 22224663 25778889999999999999998887754
No 257
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.03 E-value=3e-08 Score=90.27 Aligned_cols=115 Identities=8% Similarity=0.044 Sum_probs=74.8
Q ss_pred EEEEecCCCCEEEEeCCCC-----------cEEEEecccCcee--eEeee-cCccEEEEEEeCCCCeEEEEcC-CCeEEE
Q 017194 20 CCIASRDRPGFVASSGEDG-----------CICWFDLRSKDVQ--LVTDV-GNGPVTSLCFKSGNEDIIYVSS-GKEVKS 84 (375)
Q Consensus 20 ~~~~~~~~~~~l~s~~~d~-----------~i~iw~~~~~~~~--~~~~~-~~~~v~~l~~~~~~~~l~~~~~-d~~i~i 84 (375)
++++.|.++++++.|+.+. .+.+||..+++-. ..+.. +.....++++..+++.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 5577773378888886542 5889999887642 22222 2233345777889999998885 458999
Q ss_pred EECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEe-CC-----CcEEEEeCcCce
Q 017194 85 FDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACAD-DG-----GDVKIIDIRQHC 136 (375)
Q Consensus 85 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----g~i~iwd~~~~~ 136 (375)
||..+.+ +..+..... ...-.+++..++++.++.|+ .+ ..+.+||..+.+
T Consensus 270 yd~~t~~-W~~~~~~~~-~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 270 YDSSSDS-WIPGPDMQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEGGGTE-EEECCCCSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred ecCcCCc-eeECCCCCc-cccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 9988653 343333321 11223456667899999888 34 569999998764
No 258
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.02 E-value=4.4e-07 Score=74.32 Aligned_cols=225 Identities=12% Similarity=0.010 Sum_probs=134.0
Q ss_pred CceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCC--CeEEEEECCCCCcc
Q 017194 16 ATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSG--KEVKSFDVHMPASW 93 (375)
Q Consensus 16 ~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d--~~i~iwd~~~~~~~ 93 (375)
.....++|+++ ++++++-..++.|..||... +....+. ....+..+++.++++.+++.... ..|..++..+++.
T Consensus 32 ~~pegia~~~~-g~lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~- 107 (306)
T 2p4o_A 32 TFLENLASAPD-GTIFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV- 107 (306)
T ss_dssp CCEEEEEECTT-SCEEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE-
T ss_pred CCcceEEECCC-CCEEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE-
Confidence 45678999998 78777777889999999765 3333333 24568899999999866554332 2477777766543
Q ss_pred cccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCcee-eeeEe--------cCcccceeEEEEeeCCCcEEEE
Q 017194 94 RPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCL-YKSLR--------AGHSSICSSVQFIPWKPWEVIS 164 (375)
Q Consensus 94 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~--------~~~~~~v~~~~~~~~~~~~l~~ 164 (375)
..+..... ......++..+++..+++-..++.|+++|...++. +.... ...-...+.+ +|++++++++
T Consensus 108 ~~~~~~~~-~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~ 184 (306)
T 2p4o_A 108 ETLLTLPD-AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVS 184 (306)
T ss_dssp EEEEECTT-CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEE
T ss_pred EEEEeCCC-ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEE
Confidence 22222211 12234455555554444444688999999865421 11100 0111234555 7888756667
Q ss_pred eecCCeEEEeeCCC-CCc--ceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcc
Q 017194 165 GGLDSKLVMWDFSK-GRP--NKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESEL 241 (375)
Q Consensus 165 ~~~d~~i~~wd~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 241 (375)
-...+.|..||+.. ++. ...+. . ......+++.+ +|+++++....+.|.++|.. ++
T Consensus 185 d~~~~~I~~~~~~~~g~~~~~~~~~-~-------------~~~P~gi~vd~------dG~l~va~~~~~~V~~~~~~-G~ 243 (306)
T 2p4o_A 185 NTEKMLLLRIPVDSTDKPGEPEIFV-E-------------QTNIDDFAFDV------EGNLYGATHIYNSVVRIAPD-RS 243 (306)
T ss_dssp ETTTTEEEEEEBCTTSCBCCCEEEE-E-------------SCCCSSEEEBT------TCCEEEECBTTCCEEEECTT-CC
T ss_pred eCCCCEEEEEEeCCCCCCCccEEEe-c-------------cCCCCCeEECC------CCCEEEEeCCCCeEEEECCC-CC
Confidence 67788999999875 322 11111 0 12345677877 78876666677899999976 33
Q ss_pred eeec-ccccCCCCCCceeec---ccccceee
Q 017194 242 NISR-SKSTTKPLKGSQSTS---KVNIRDAE 268 (375)
Q Consensus 242 ~~~~-~~~~~~~~~~~~~~s---~~g~~~~~ 268 (375)
.... ..........+++|. ||+..|..
T Consensus 244 ~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyV 274 (306)
T 2p4o_A 244 TTIIAQAEQGVIGSTAVAFGQTEGDCTAIYV 274 (306)
T ss_dssp EEEEECGGGTCTTEEEEEECCSTTTTTEEEE
T ss_pred EEEEeecccccCCceEEEEecccCCCCEEEE
Confidence 2211 111122445677777 78776654
No 259
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.00 E-value=2.2e-07 Score=82.76 Aligned_cols=202 Identities=11% Similarity=0.042 Sum_probs=120.0
Q ss_pred CEEEEeCC-CCcEEEEec-ccCceeeEeeecCc-c---------E-EEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccc
Q 017194 29 GFVASSGE-DGCICWFDL-RSKDVQLVTDVGNG-P---------V-TSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRP 95 (375)
Q Consensus 29 ~~l~s~~~-d~~i~iw~~-~~~~~~~~~~~~~~-~---------v-~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 95 (375)
..++.++. ++.|.-+|. .+|+.+........ . + ..++. .+..++.++.|+.|..+|.++++..-.
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~ 140 (571)
T 2ad6_A 63 DMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINWE 140 (571)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEEE
Confidence 35555666 789999999 89998776653221 0 0 11222 245788888899999999998876543
Q ss_pred cccccC-CCcceeE-EEEcCCCCeEEEEeC------CCcEEEEeCcCceeeeeEecCcccc-------------------
Q 017194 96 LESYNY-NKEEINQ-IVCNPKSSFLACADD------GGDVKIIDIRQHCLYKSLRAGHSSI------------------- 148 (375)
Q Consensus 96 ~~~~~~-~~~~v~~-~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~------------------- 148 (375)
...-.. ....+.+ ... .+..+++++. ++.|..+|.++++.+.++. .....
T Consensus 141 ~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~-~~~~~~~~~~~p~~~~~~~~~G~~ 217 (571)
T 2ad6_A 141 VEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF-ATGSDDSVRLAKDFNSANPHYGQF 217 (571)
T ss_dssp EECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE-SSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred ecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc-cCCCccccccCccccccccccccc
Confidence 322110 0001211 111 1335666654 7899999999999887776 21110
Q ss_pred -------------------eeEEEEeeCCCcEEEEeecC----------------CeEEEeeCCCCCcceEEecCCCCCC
Q 017194 149 -------------------CSSVQFIPWKPWEVISGGLD----------------SKLVMWDFSKGRPNKIVNFGLPENN 193 (375)
Q Consensus 149 -------------------v~~~~~~~~~~~~l~~~~~d----------------~~i~~wd~~~~~~~~~~~~~~~~~~ 193 (375)
...+++.++.. .+..+..+ +.|..+|.++++.+..++....+.-
T Consensus 218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g-~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~ 296 (571)
T 2ad6_A 218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLN-LFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEW 296 (571)
T ss_dssp SHHHHTSSTTGGGGCCCCCCSCCEEETTTT-EEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSS
T ss_pred ccccccCcccceecCCCCeeeeEEEcCCCC-eEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccc
Confidence 02356677655 45555432 3699999999999888875310000
Q ss_pred CCCCcccCCCceeEEeecCCccccCCC---CEEEEEecCCcEEEEeCCCcceeecc
Q 017194 194 GNAGQCYNPAFVHAIAIPDADMLDKTN---KICVVAKGDGVVDVINIESELNISRS 246 (375)
Q Consensus 194 ~~~~~~~~~~~v~~~~~~~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~ 246 (375)
. .-....++. +...+ ++ +.++.++.+|.++++|..+++.....
T Consensus 297 d---~~~~~~p~l-~~~~~------~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~ 342 (571)
T 2ad6_A 297 D---FAGVNQMVL-TDQPV------NGKMTPLLSHIDRNGILYTLNRENGNLIVAE 342 (571)
T ss_dssp C---CCCCCCCEE-EEEEE------TTEEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred c---cccCCCCEE-Eeccc------CCcEEEEEEEeCCCcEEEEEECCCCCEEeee
Confidence 0 000011111 12112 46 36778899999999999998776554
No 260
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.99 E-value=1.8e-06 Score=73.00 Aligned_cols=208 Identities=11% Similarity=-0.042 Sum_probs=131.0
Q ss_pred CCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeE-EEEcCCCeEEEEECCCCCcc
Q 017194 15 KATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDI-IYVSSGKEVKSFDVHMPASW 93 (375)
Q Consensus 15 ~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~ 93 (375)
......++|.+.++.++++-...+.|..+++........+.........+++.+.+..| ++-...+.|.+.++.....
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~- 193 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR- 193 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC-
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce-
Confidence 34567899998746666666677889999988665434333333455778898755544 4445567888888874321
Q ss_pred cccccccCCCcceeEEEEcCCCCeEEEEe-CC-CcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeE
Q 017194 94 RPLESYNYNKEEINQIVCNPKSSFLACAD-DG-GDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKL 171 (375)
Q Consensus 94 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i 171 (375)
..+. .........+++.|.+..|+... .. +.|..+++.......... ..-...+.|+++|++..++++-+..+.|
T Consensus 194 ~~l~--~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-~~~~~PnGlavd~~~~~lY~aD~~~~~I 270 (386)
T 3v65_B 194 KVLL--WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD-THLFWPNGLTIDYAGRRMYWVDAKHHVI 270 (386)
T ss_dssp EEEE--CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-SSCSCEEEEEEEGGGTEEEEEETTTTEE
T ss_pred EEee--cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE-CCCCCeeeEEEeCCCCEEEEEECCCCEE
Confidence 2211 11134578899999776666554 33 678888876433322222 2334578999998777566666677899
Q ss_pred EEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecc
Q 017194 172 VMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRS 246 (375)
Q Consensus 172 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 246 (375)
..+|+.... ...+... .......|++. .+.++++-...+.|..++..++......
T Consensus 271 ~~~d~dG~~-~~~~~~~------------~~~~P~giav~-------~~~ly~td~~~~~V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 271 ERANLDGSH-RKAVISQ------------GLPHPFAITVF-------EDSLYWTDWHTKSINSANKFTGKNQEII 325 (386)
T ss_dssp EEECTTSCS-CEEEECS------------SCSSEEEEEEE-------TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEeCCCCe-eEEEEEC------------CCCCceEEEEE-------CCEEEEeeCCCCeEEEEECCCCcceEEE
Confidence 999987433 3333211 12345677774 3666666667888999986665544433
No 261
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.98 E-value=7.8e-07 Score=79.22 Aligned_cols=205 Identities=10% Similarity=0.031 Sum_probs=124.5
Q ss_pred CEEEEeCC-CCcEEEEec-ccCceeeEeeecCcc-----------EEEEEEeCCCCe----EEEEcCCCeEEEEECCCCC
Q 017194 29 GFVASSGE-DGCICWFDL-RSKDVQLVTDVGNGP-----------VTSLCFKSGNED----IIYVSSGKEVKSFDVHMPA 91 (375)
Q Consensus 29 ~~l~s~~~-d~~i~iw~~-~~~~~~~~~~~~~~~-----------v~~l~~~~~~~~----l~~~~~d~~i~iwd~~~~~ 91 (375)
..|+.++. ++.|.-+|. .+|+.+-........ ...+++.|.+.. ++.++.|+.|..+|.++++
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~ 142 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGE 142 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCC
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCC
Confidence 35666666 789999999 899987776542210 123455444445 8888889999999999887
Q ss_pred cccccccccC-CCcceeE-EEEcCCCCeEEEEe------CCCcEEEEeCcCceeeeeEecCcccc---------------
Q 017194 92 SWRPLESYNY-NKEEINQ-IVCNPKSSFLACAD------DGGDVKIIDIRQHCLYKSLRAGHSSI--------------- 148 (375)
Q Consensus 92 ~~~~~~~~~~-~~~~v~~-~~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~~~~--------------- 148 (375)
..-....... ....+.+ ..+. ++ .+++++ .++.|+.+|.++++.+-.+. .....
T Consensus 143 ~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~-~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 143 TVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY-ATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEE-SSSCHHHHTBCTTTTTTCGG
T ss_pred EEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEc-CCCCcccccccccccccccc
Confidence 6433322110 0001111 1111 34 555554 37999999999999887776 22111
Q ss_pred ----------------------e-eEEEEeeCCCcEEEEeecC----------------CeEEEeeCCCCCcceEEecCC
Q 017194 149 ----------------------C-SSVQFIPWKPWEVISGGLD----------------SKLVMWDFSKGRPNKIVNFGL 189 (375)
Q Consensus 149 ----------------------v-~~~~~~~~~~~~l~~~~~d----------------~~i~~wd~~~~~~~~~~~~~~ 189 (375)
+ ..+++.+... +++.+..+ +.|..+|.++++.+..++...
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g-~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~ 298 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTN-LIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTP 298 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTT-EEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESST
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCC-EEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCC
Confidence 0 1345666666 56666554 489999999999988887541
Q ss_pred CCCCCCCCcccCCCceeEEeec-CCccccCCC---CEEEEEecCCcEEEEeCCCcceeeccc
Q 017194 190 PENNGNAGQCYNPAFVHAIAIP-DADMLDKTN---KICVVAKGDGVVDVINIESELNISRSK 247 (375)
Q Consensus 190 ~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~ 247 (375)
.+.- .......++. +... . ++ ..++.++.+|.+.++|..+++.+....
T Consensus 299 ~d~w---d~d~~~~p~l-~d~~~~------~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 299 HDEW---DYAGVNVMML-SEQKDK------DGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp TCSS---CCCCCCCCEE-EEEECT------TSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred Cccc---cccCCCccEE-Eecccc------CCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 1000 0000001111 1221 2 46 567888999999999999988776543
No 262
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.98 E-value=6.6e-06 Score=68.52 Aligned_cols=198 Identities=8% Similarity=0.028 Sum_probs=121.3
Q ss_pred CCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEE-cCCCeEEEEECCCCCcc
Q 017194 15 KATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYV-SSGKEVKSFDVHMPASW 93 (375)
Q Consensus 15 ~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~ 93 (375)
.+..+|.+..++ + +|+.+.. ..|+..++........+. ....+..++|.+.+..|+.+ ...+.|..+++......
T Consensus 33 ~d~~~C~~~~~~-~-~ll~~~~-~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~ 108 (349)
T 3v64_C 33 PDRRSCKALGPE-P-VLLFANR-IDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE 108 (349)
T ss_dssp TTSSCEEESSSC-C-EEEEECB-SCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCCCcccccccC-c-eeEeecc-cceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCce
Confidence 345566666654 4 3433332 458888887655443333 34557899999766655544 45688999998754322
Q ss_pred cccccccCCCcceeEEEEcCCCCeE-EEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecC-CeE
Q 017194 94 RPLESYNYNKEEINQIVCNPKSSFL-ACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLD-SKL 171 (375)
Q Consensus 94 ~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~i 171 (375)
..+. ........+++.+.+..| ++-...+.|.+.+++.......+. ..-.....+++.|.+..++++-... +.|
T Consensus 109 ~~~~---~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~-~~l~~P~~iavdp~~g~ly~td~~~~~~I 184 (349)
T 3v64_C 109 EVVS---TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-QSLEKPRAIALHPMEGTIYWTDWGNTPRI 184 (349)
T ss_dssp EEEC---SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-TTCSCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred EEEe---CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe-CCCCCcceEEEecCcCeEEEeccCCCCEE
Confidence 2111 112345788998755555 444566789999986543333333 3345678999999776556665555 789
Q ss_pred EEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe-cCCcEEEEeCCC
Q 017194 172 VMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK-GDGVVDVINIES 239 (375)
Q Consensus 172 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~ 239 (375)
..+++... ....+... .-...+.|+++| ++..|+.+. ..+.|..+|+..
T Consensus 185 ~r~~~dG~-~~~~~~~~------------~~~~PnGla~d~------~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 185 EASSMDGS-GRRIIADT------------HLFWPNGLTIDY------AGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp EEEETTSC-SCEESCCS------------SCSCEEEEEEET------TTTEEEEEETTTTEEEEEETTS
T ss_pred EEEeCCCC-CcEEEEEC------------CCCCcceEEEeC------CCCEEEEEECCCCEEEEEeCCC
Confidence 98887643 33332111 124578999997 455555554 567899998874
No 263
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.98 E-value=3.6e-06 Score=70.10 Aligned_cols=206 Identities=11% Similarity=-0.022 Sum_probs=129.5
Q ss_pred CceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeE-EEEcCCCeEEEEECCCCCccc
Q 017194 16 ATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDI-IYVSSGKEVKSFDVHMPASWR 94 (375)
Q Consensus 16 ~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~ 94 (375)
..+..++|.+.++.++++-...+.|..+++........+.........+++.+.+..| ++-...+.|.+.++..... .
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~ 151 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-K 151 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-E
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-E
Confidence 3467889998745566666677889999988665444333333456789998755444 5555568999999874322 2
Q ss_pred ccccccCCCcceeEEEEcCCCCeEEEEe-CC-CcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEE
Q 017194 95 PLESYNYNKEEINQIVCNPKSSFLACAD-DG-GDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLV 172 (375)
Q Consensus 95 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~ 172 (375)
.+. .........+++.|.+..|+... .. +.|..+++.... ...+....-...+.|+++|++..++++-...+.|.
T Consensus 152 ~l~--~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~ 228 (349)
T 3v64_C 152 VLL--WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIE 228 (349)
T ss_dssp EEE--CTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEE--eCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEE
Confidence 221 11134568899999766665554 34 678888876432 22222023345789999987775666666778999
Q ss_pred EeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeec
Q 017194 173 MWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISR 245 (375)
Q Consensus 173 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 245 (375)
.+|+... ....+... .......+++. ++.++++-...+.|..++..++.....
T Consensus 229 ~~~~dG~-~~~~~~~~------------~~~~P~giav~-------~~~ly~td~~~~~V~~~~~~~G~~~~~ 281 (349)
T 3v64_C 229 RANLDGS-HRKAVISQ------------GLPHPFAITVF-------EDSLYWTDWHTKSINSANKFTGKNQEI 281 (349)
T ss_dssp EEETTSC-SCEEEECS------------SCSSEEEEEEE-------TTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred EEeCCCC-ceEEEEeC------------CCCCceEEEEE-------CCEEEEecCCCCeEEEEEccCCCccEE
Confidence 9998743 33333211 12345677773 366666666778898888665544433
No 264
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.97 E-value=5.4e-06 Score=77.25 Aligned_cols=320 Identities=9% Similarity=0.004 Sum_probs=177.3
Q ss_pred CceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEee-------ecCccEEEEEEeCCCCeEEEEcCCCeEEEEECC
Q 017194 16 ATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTD-------VGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVH 88 (375)
Q Consensus 16 ~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~-------~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~ 88 (375)
..|.++...++ +.+.+ |..+ -+.+||..+++...... .....|.++...++|. |..|+..+-|.++|..
T Consensus 211 ~~i~~i~~d~~-g~lwi-gt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~ 286 (781)
T 3v9f_A 211 NDVRCIYKDTN-GNIWI-GTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQ 286 (781)
T ss_dssp SSEEEEEECTT-CCEEE-EETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETT
T ss_pred CceeEEEEcCC-CCEEE-EeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCC
Confidence 46888888777 55544 3444 48889987665432211 1245789998888876 5556665678889987
Q ss_pred CCCcccccc-----------cccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEe---------cCcccc
Q 017194 89 MPASWRPLE-----------SYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLR---------AGHSSI 148 (375)
Q Consensus 89 ~~~~~~~~~-----------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---------~~~~~~ 148 (375)
+........ ........|.++...+++. |..|+.++-|..++..+.... .+. ......
T Consensus 287 ~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~ 364 (781)
T 3v9f_A 287 QNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFH-TWSYSPTQMNESSLSNKV 364 (781)
T ss_dssp CC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCE-EEC----CCCSSCCSSSC
T ss_pred CCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcce-eeccCccccccCCCCCcc
Confidence 643211111 0112245788998888775 666776777999987654332 221 012356
Q ss_pred eeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEec
Q 017194 149 CSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKG 228 (375)
Q Consensus 149 v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~ 228 (375)
|.++...+++. |..|+.++-|..||..+++... +... .......|.++...+ ++. |.+|+.
T Consensus 365 v~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~~~~-~~~~---------~~~~~~~v~~i~~d~------~g~-lWigt~ 425 (781)
T 3v9f_A 365 VSSVCDDGQGK--LWIGTDGGGINVFENGKRVAIY-NKEN---------RELLSNSVLCSLKDS------EGN-LWFGTY 425 (781)
T ss_dssp EEEEEECTTSC--EEEEEBSSCEEEEETTEEEEEC-C--------------CCCSBEEEEEECT------TSC-EEEEET
T ss_pred eEEEEEcCCCC--EEEEeCCCcEEEEECCCCeEEE-ccCC---------CCCCCcceEEEEECC------CCC-EEEEec
Confidence 88888888775 7777777779999976543211 1100 001235688888865 454 555777
Q ss_pred CCcEEEEeCCCcceeeccc-ccCCCCCCceeecccccceeee--e--eeecCCcceeEeeeeec---CCCccEEEEEEee
Q 017194 229 DGVVDVINIESELNISRSK-STTKPLKGSQSTSKVNIRDAEM--E--ILDQSGGKRLHLDYSVG---GHTAAASCVAFSM 300 (375)
Q Consensus 229 dg~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~s~~g~~~~~~--~--~~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~ 300 (375)
++-|..+|..+++...... ......+.++...++|...+.. | .++.... ......... .....|.++...
T Consensus 426 ~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~-~~~~~~~~~~~~~~~~~i~~i~~d- 503 (781)
T 3v9f_A 426 LGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTHAGVFVIDLASK-KVIHHYDTSNSQLLENFVRSIAQD- 503 (781)
T ss_dssp TEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEETTEEEEEESSSS-SCCEEECTTTSSCSCSCEEEEEEC-
T ss_pred cCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEECCceEEEeCCCC-eEEecccCcccccccceeEEEEEc-
Confidence 6779999987654332221 1122344455556666644321 1 1111111 111111111 113578899887
Q ss_pred cCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEe
Q 017194 301 FGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYS 373 (375)
Q Consensus 301 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~ 373 (375)
++|.+.+....+| |..||..+.+...-. ....-....|.++...+ +|.+.++. .+|.|..|+
T Consensus 504 --~~g~lWigt~~~G-l~~~~~~~~~~~~~~------~~~~l~~~~i~~i~~d~-~g~lWi~T-~~Glv~~~d 565 (781)
T 3v9f_A 504 --SEGRFWIGTFGGG-VGIYTPDMQLVRKFN------QYEGFCSNTINQIYRSS-KGQMWLAT-GEGLVCFPS 565 (781)
T ss_dssp --TTCCEEEEESSSC-EEEECTTCCEEEEEC------TTTTCSCSCEEEEEECT-TSCEEEEE-TTEEEEESC
T ss_pred --CCCCEEEEEcCCC-EEEEeCCCCeEEEcc------CCCCCCCCeeEEEEECC-CCCEEEEE-CCCceEEEC
Confidence 7887655444344 778888765322100 00011245678887776 66654443 355436655
No 265
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.96 E-value=5.3e-06 Score=70.15 Aligned_cols=196 Identities=8% Similarity=0.030 Sum_probs=119.4
Q ss_pred ceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEE-cCCCeEEEEECCCCCcccc
Q 017194 17 TATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYV-SSGKEVKSFDVHMPASWRP 95 (375)
Q Consensus 17 ~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~ 95 (375)
.-.|.+..+. + +|+.+.. ..|+..++........+. ....+..++|.+.+..|+.+ ...+.|..+++........
T Consensus 78 ~~~C~~~~~~-~-~l~~~~~-~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~ 153 (386)
T 3v65_B 78 RRSCKALGPE-P-VLLFANR-IDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV 153 (386)
T ss_dssp SSCEEECSSC-C-EEEEECB-SCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE
T ss_pred CCeECCcccc-c-eeEeecC-ccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE
Confidence 3445554443 3 4443333 468888887665444443 34567899999765555544 4568899999875432121
Q ss_pred cccccCCCcceeEEEEcCCCCeEE-EEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecC-CeEEE
Q 017194 96 LESYNYNKEEINQIVCNPKSSFLA-CADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLD-SKLVM 173 (375)
Q Consensus 96 ~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~i~~ 173 (375)
+. ........+++.+.+..|+ +-...+.|.+.+++.......+. ........+++.|.+..++++-... +.|..
T Consensus 154 ~~---~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~-~~l~~P~giavdp~~g~ly~td~~~~~~I~r 229 (386)
T 3v65_B 154 VS---TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-QSLEKPRAIALHPMEGTIYWTDWGNTPRIEA 229 (386)
T ss_dssp EC---SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC-SSCSCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred Ee---CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec-CCCCCCcEEEEEcCCCeEEEeccCCCCEEEE
Confidence 11 1123456788887655554 44456789888886543333333 3345679999999877555555555 78999
Q ss_pred eeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEE-ecCCcEEEEeCCC
Q 017194 174 WDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVA-KGDGVVDVINIES 239 (375)
Q Consensus 174 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~ 239 (375)
+++... ....+... .-...+.|+++| ++..|+.+ ...+.|..+|+..
T Consensus 230 ~~~dG~-~~~~~~~~------------~~~~PnGlavd~------~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 230 SSMDGS-GRRIIADT------------HLFWPNGLTIDY------AGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp EETTSC-SCEEEECS------------SCSCEEEEEEEG------GGTEEEEEETTTTEEEEECTTS
T ss_pred EeCCCC-CcEEEEEC------------CCCCeeeEEEeC------CCCEEEEEECCCCEEEEEeCCC
Confidence 887643 33333211 124578999987 45555555 4567888888764
No 266
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.94 E-value=1.8e-06 Score=70.68 Aligned_cols=239 Identities=6% Similarity=-0.050 Sum_probs=133.7
Q ss_pred ccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCC--cEEEEeCcCce
Q 017194 59 GPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGG--DVKIIDIRQHC 136 (375)
Q Consensus 59 ~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~ 136 (375)
.....++|+++++.+++-..++.|..||.... ... .... ......+++.++++++++..... .|..+|..+++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~-~~~~---~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQI-HATV---EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEE-EEEC---SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEE-EEeC---CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe
Confidence 45778999999987666667889999998742 211 1111 35688999999998665554332 47777777776
Q ss_pred eeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccc
Q 017194 137 LYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADML 216 (375)
Q Consensus 137 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 216 (375)
...............++..+.+. .+++-..++.|+.+|...++........ ..... .........+.+ +|
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~-~~v~d~~~g~i~~~d~~~~~~~v~~~~~--~~~~~-~~~~~~~~pngi--s~---- 176 (306)
T 2p4o_A 107 VETLLTLPDAIFLNGITPLSDTQ-YLTADSYRGAIWLIDVVQPSGSIWLEHP--MLARS-NSESVFPAANGL--KR---- 176 (306)
T ss_dssp EEEEEECTTCSCEEEEEESSSSE-EEEEETTTTEEEEEETTTTEEEEEEECG--GGSCS-STTCCSCSEEEE--EE----
T ss_pred EEEEEeCCCccccCcccccCCCc-EEEEECCCCeEEEEeCCCCcEeEEEECC--ccccc-cccCCCCcCCCc--Cc----
Confidence 54333211122334555555443 4555446889999997654211111000 00000 000001233445 55
Q ss_pred cCCCCEEEEE-ecCCcEEEEeCCC-cceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEE
Q 017194 217 DKTNKICVVA-KGDGVVDVINIES-ELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAAS 294 (375)
Q Consensus 217 ~~~~~~l~~~-~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 294 (375)
+++.|+++ ...+.|..|++.. +... ..+....+ ....
T Consensus 177 --dg~~lyv~d~~~~~I~~~~~~~~g~~~-----------------------------------~~~~~~~~----~~P~ 215 (306)
T 2p4o_A 177 --FGNFLYVSNTEKMLLLRIPVDSTDKPG-----------------------------------EPEIFVEQ----TNID 215 (306)
T ss_dssp --ETTEEEEEETTTTEEEEEEBCTTSCBC-----------------------------------CCEEEEES----CCCS
T ss_pred --CCCEEEEEeCCCCEEEEEEeCCCCCCC-----------------------------------ccEEEecc----CCCC
Confidence 56655555 4567899999874 1100 00111111 2345
Q ss_pred EEEEeecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeec---CCCCCcEEEeeC
Q 017194 295 CVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTT---PTESENLVVCDT 365 (375)
Q Consensus 295 ~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~l~s~~~ 365 (375)
.++++ ++|+++++....+.|.+++.. ++.. .+...........+++|. | +++.|+.++.
T Consensus 216 gi~vd---~dG~l~va~~~~~~V~~~~~~-G~~~-------~~~~~~~~~~~p~~~a~~g~~~-d~~~LyVt~~ 277 (306)
T 2p4o_A 216 DFAFD---VEGNLYGATHIYNSVVRIAPD-RSTT-------IIAQAEQGVIGSTAVAFGQTEG-DCTAIYVVTN 277 (306)
T ss_dssp SEEEB---TTCCEEEECBTTCCEEEECTT-CCEE-------EEECGGGTCTTEEEEEECCSTT-TTTEEEEEEC
T ss_pred CeEEC---CCCCEEEEeCCCCeEEEECCC-CCEE-------EEeecccccCCceEEEEecccC-CCCEEEEECC
Confidence 67888 899888777778899999976 3211 011111123457889998 6 7666666543
No 267
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.90 E-value=1.7e-06 Score=77.21 Aligned_cols=161 Identities=9% Similarity=-0.059 Sum_probs=99.9
Q ss_pred CCEEEEeCCCCcEEEEecccCceeeEeeecCc----cEE-EEEEeC---CCC-eEEEEc------CCCeEEEEECCCCCc
Q 017194 28 PGFVASSGEDGCICWFDLRSKDVQLVTDVGNG----PVT-SLCFKS---GNE-DIIYVS------SGKEVKSFDVHMPAS 92 (375)
Q Consensus 28 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~----~v~-~l~~~~---~~~-~l~~~~------~d~~i~iwd~~~~~~ 92 (375)
+..++.++.|+.|.-+|..+|+.+........ .+. ...... +++ .+++++ .++.|+.+|.++++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 34677778899999999999998776654321 111 111111 233 455554 278999999998765
Q ss_pred ccccccccC--------------------------------------CCcceeEEEEcCCCCeEEEEeC-----------
Q 017194 93 WRPLESYNY--------------------------------------NKEEINQIVCNPKSSFLACADD----------- 123 (375)
Q Consensus 93 ~~~~~~~~~--------------------------------------~~~~v~~~~~~~~~~~l~~~~~----------- 123 (375)
.-....... ....-..+++.|+..+++.+..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 432211000 0001123566777777777663
Q ss_pred ---------C----CcEEEEeCcCceeeeeEecC-ccc----ceeE-EEEe---eCCC--cEEEEeecCCeEEEeeCCCC
Q 017194 124 ---------G----GDVKIIDIRQHCLYKSLRAG-HSS----ICSS-VQFI---PWKP--WEVISGGLDSKLVMWDFSKG 179 (375)
Q Consensus 124 ---------d----g~i~iwd~~~~~~~~~~~~~-~~~----~v~~-~~~~---~~~~--~~l~~~~~d~~i~~wd~~~~ 179 (375)
| +.|..+|.++++.+-.++.. |.. .+.. +.+. .+|+ ..++.++.+|.++++|.+++
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG 356 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNG 356 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTC
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCC
Confidence 2 57999999999998887622 211 1111 1122 3553 26888999999999999999
Q ss_pred CcceEEecC
Q 017194 180 RPNKIVNFG 188 (375)
Q Consensus 180 ~~~~~~~~~ 188 (375)
+.+..+...
T Consensus 357 ~~lw~~~~~ 365 (582)
T 1flg_A 357 KLQNAFPFV 365 (582)
T ss_dssp CEEEEEESS
T ss_pred CEecccccc
Confidence 998887754
No 268
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.89 E-value=1.5e-05 Score=65.36 Aligned_cols=179 Identities=11% Similarity=0.026 Sum_probs=111.7
Q ss_pred CcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEE-cCCCeEEEEECCCC---CcccccccccCCCcceeEEEEcC
Q 017194 38 GCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYV-SSGKEVKSFDVHMP---ASWRPLESYNYNKEEINQIVCNP 113 (375)
Q Consensus 38 ~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~d~~i~iwd~~~~---~~~~~~~~~~~~~~~v~~~~~~~ 113 (375)
..|+..|+.+.+....+. ....+..++|.+.+..|+.+ ...+.|..+++... .....+ ..........+++.+
T Consensus 10 ~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~--~~~~~~~p~glavd~ 86 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV--ISRDIQAPDGLAVDW 86 (316)
T ss_dssp SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE--ECSSCSCCCEEEEET
T ss_pred CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEE--EeCCCCCcCEEEEee
Confidence 458999998776555444 34567899999876555544 45689999998751 111111 111123457889987
Q ss_pred CCCeEE-EEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecC-CeEEEeeCCCCCcceEEecCCCC
Q 017194 114 KSSFLA-CADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLD-SKLVMWDFSKGRPNKIVNFGLPE 191 (375)
Q Consensus 114 ~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~i~~wd~~~~~~~~~~~~~~~~ 191 (375)
.+..|+ +-...+.|.++++........+. ........+++.|.+..++++.... +.|...++. +.....+...
T Consensus 87 ~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~--- 161 (316)
T 1ijq_A 87 IHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTE--- 161 (316)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSSEEEEEE-CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECS---
T ss_pred cCCeEEEEECCCCEEEEEeCCCCceEEEEE-CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEEC---
Confidence 555554 44567889999987543333333 3345678999999776455554443 788888875 4444433211
Q ss_pred CCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe-cCCcEEEEeCCC
Q 017194 192 NNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK-GDGVVDVINIES 239 (375)
Q Consensus 192 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~ 239 (375)
.-...+.|+++| ++..|+.+. ..+.|..+|+..
T Consensus 162 ---------~~~~P~gla~d~------~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 162 ---------NIQWPNGITLDL------LSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp ---------SCSCEEEEEEET------TTTEEEEEETTTTEEEEEETTS
T ss_pred ---------CCCCceEEEEec------cCCEEEEEECCCCeEEEEecCC
Confidence 124678999987 455555554 567899999874
No 269
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.87 E-value=1.9e-05 Score=64.78 Aligned_cols=207 Identities=13% Similarity=-0.006 Sum_probs=127.5
Q ss_pred CCceeEEEEecCCCCEEEEeCCCCcEEEEeccc----CceeeEeeecCccEEEEEEeCCCCeE-EEEcCCCeEEEEECCC
Q 017194 15 KATATCCIASRDRPGFVASSGEDGCICWFDLRS----KDVQLVTDVGNGPVTSLCFKSGNEDI-IYVSSGKEVKSFDVHM 89 (375)
Q Consensus 15 ~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~----~~~~~~~~~~~~~v~~l~~~~~~~~l-~~~~~d~~i~iwd~~~ 89 (375)
-.....++|.+.++.++++-..++.|..+++.. ......+...-.....+++.+.+..| ++-...+.|.+.++..
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 345678999987456666666778999999876 22222232222456789998755544 4446678999999874
Q ss_pred CCcccccccccCCCcceeEEEEcCCCCeEEEEeCC--CcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeec
Q 017194 90 PASWRPLESYNYNKEEINQIVCNPKSSFLACADDG--GDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGL 167 (375)
Q Consensus 90 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 167 (375)
.. ...+.. ........+++.|.+..|+.+... +.|...++.. +....+....-...+.+++++++..++++-..
T Consensus 109 ~~-~~~~~~--~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~ 184 (316)
T 1ijq_A 109 VK-RKTLFR--ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 184 (316)
T ss_dssp SS-EEEEEE--CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred Cc-eEEEEE--CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCCceEEEEeccCCEEEEEECC
Confidence 32 222211 113457889999977666655542 6788888753 33333321233467899999987755566667
Q ss_pred CCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCccee
Q 017194 168 DSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNI 243 (375)
Q Consensus 168 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 243 (375)
.+.|..+|+.. .....+.... . .......+++. .+.++++-...+.|..++..+++..
T Consensus 185 ~~~I~~~d~dg-~~~~~~~~~~-------~---~~~~P~giav~-------~~~ly~~d~~~~~V~~~~~~~g~~~ 242 (316)
T 1ijq_A 185 LHSISSIDVNG-GNRKTILEDE-------K---RLAHPFSLAVF-------EDKVFWTDIINEAIFSANRLTGSDV 242 (316)
T ss_dssp TTEEEEEETTS-CSCEEEEECT-------T---TTSSEEEEEEE-------TTEEEEEETTTTEEEEEETTTCCCC
T ss_pred CCeEEEEecCC-CceEEEeecC-------C---ccCCcEEEEEE-------CCEEEEEECCCCeEEEEeCCCCcce
Confidence 78999999874 3333332110 0 11345677774 3666666667789999998765443
No 270
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.85 E-value=2.3e-05 Score=64.62 Aligned_cols=280 Identities=9% Similarity=-0.034 Sum_probs=147.1
Q ss_pred CCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEee----ecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCC
Q 017194 15 KATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTD----VGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMP 90 (375)
Q Consensus 15 ~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~----~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~ 90 (375)
...+.++.|.+. +..+++ +.+|.| +...+.++.=..+. .....+.++.|.+ +. +++++..+.|.. ....+
T Consensus 35 ~~~~~~v~~~~~-~~~~~~-G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~-~~~~g~~g~i~~-S~DgG 108 (327)
T 2xbg_A 35 TATILDMSFIDR-HHGWLV-GVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE-GWIVGEPPIMLH-TTDGG 108 (327)
T ss_dssp SSCEEEEEESSS-SCEEEE-ETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TE-EEEEEETTEEEE-ESSTT
T ss_pred CCcEEEEEECCC-CcEEEE-cCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-Ce-EEEEECCCeEEE-ECCCC
Confidence 457889998766 566664 456654 33334343211111 1245788999986 44 444455665443 33435
Q ss_pred CcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCe
Q 017194 91 ASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSK 170 (375)
Q Consensus 91 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 170 (375)
+.+..+.....+...+..+.+.+++..++++ .+|.|.. ..+.++.-..........+..+.+.|++. +++.+ .+|.
T Consensus 109 ~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~-~~~~g-~~G~ 184 (327)
T 2xbg_A 109 QSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGE-YVAVS-SRGS 184 (327)
T ss_dssp SSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSC-EEEEE-TTSS
T ss_pred CCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCc-EEEEE-CCCc
Confidence 5555544322223456778777777666555 4565433 22234333333224556788999999876 45554 4555
Q ss_pred EEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccC
Q 017194 171 LVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTT 250 (375)
Q Consensus 171 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 250 (375)
+..-+-..++.-..+... ....+..+.+.+ ++.++ .++.+|.+++.+...++
T Consensus 185 ~~~S~d~gG~tW~~~~~~------------~~~~~~~~~~~~------~g~~~-~~~~~G~~~~s~~D~G~--------- 236 (327)
T 2xbg_A 185 FYSTWEPGQTAWEPHNRT------------TSRRLHNMGFTP------DGRLW-MIVNGGKIAFSDPDNSE--------- 236 (327)
T ss_dssp EEEEECTTCSSCEEEECC------------SSSCEEEEEECT------TSCEE-EEETTTEEEEEETTEEE---------
T ss_pred EEEEeCCCCCceeECCCC------------CCCccceeEECC------CCCEE-EEeCCceEEEecCCCCC---------
Confidence 443321113333333322 245678888877 56655 44567777665422111
Q ss_pred CCCCCceeecccccceeeeeeeecCCcceeEeeeee-cCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeee
Q 017194 251 KPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSV-GGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQ 329 (375)
Q Consensus 251 ~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 329 (375)
.+..+..- ..+...+..+++. +++.+++++. +|.| ++..+.++.-
T Consensus 237 ----------------------------tW~~~~~~~~~~~~~~~~v~~~---~~~~~~~~g~-~g~i-~~S~DgG~tW- 282 (327)
T 2xbg_A 237 ----------------------------NWGELLSPLRRNSVGFLDLAYR---TPNEVWLAGG-AGAL-LCSQDGGQTW- 282 (327)
T ss_dssp ----------------------------EECCCBCTTSSCCSCEEEEEES---SSSCEEEEES-TTCE-EEESSTTSSC-
T ss_pred ----------------------------eeEeccCCcccCCcceEEEEec---CCCEEEEEeC-CCeE-EEeCCCCccc-
Confidence 11111000 0122357888888 7777777665 5666 3444444211
Q ss_pred ecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEe
Q 017194 330 TSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYS 373 (375)
Q Consensus 330 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~ 373 (375)
..+.........+..+.+.+ ++ .+++++.+|.|.-++
T Consensus 283 -----~~~~~~~~~~~~~~~v~~~~-~~-~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 283 -----QQDVDVKKVPSNFYKILFFS-PD-QGFILGQKGILLRYV 319 (327)
T ss_dssp -----EECGGGTTSSSCCCEEEEEE-TT-EEEEECSTTEEEEEC
T ss_pred -----EEcCccCCCCCCeEEEEEEC-CC-ceEEEcCCceEEEEc
Confidence 11111112335667787765 44 466777888877654
No 271
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.85 E-value=2.6e-05 Score=66.24 Aligned_cols=209 Identities=11% Similarity=-0.008 Sum_probs=129.5
Q ss_pred CCCceeEEEEecCCCCEEEEeCCCCcEEEEecccC----ceeeEeeecCccEEEEEEeCC-CCeEEEEcCCCeEEEEECC
Q 017194 14 HKATATCCIASRDRPGFVASSGEDGCICWFDLRSK----DVQLVTDVGNGPVTSLCFKSG-NEDIIYVSSGKEVKSFDVH 88 (375)
Q Consensus 14 h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~----~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~d~~i~iwd~~ 88 (375)
....+..++|++.++.++.+-...+.|..+++... .....+...-.....+++.+. ++..++-...+.|.+.+++
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 44567889999874556666666788999988752 223333333456788999874 4444455556899999987
Q ss_pred CCCcccccccccCCCcceeEEEEcCCCCeEEEEeC--CCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEee
Q 017194 89 MPASWRPLESYNYNKEEINQIVCNPKSSFLACADD--GGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGG 166 (375)
Q Consensus 89 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 166 (375)
.......+. ........+++.|.+.+|+.... .+.|...++........+. ..-...+.|++++++..++++-.
T Consensus 190 g~~~~~l~~---~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~-~~l~~P~glavd~~~~~lY~aD~ 265 (400)
T 3p5b_L 190 GVKRKTLFR---ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-ENIQWPNGITLDLLSGRLYWVDS 265 (400)
T ss_dssp TCSEEEEEE---CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC-SSCSCEEEEEEETTTTEEEEEET
T ss_pred CCceEEEEe---CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE-CCCCceEEEEEEeCCCEEEEEEC
Confidence 533222221 11345788999997767666652 3679888886443333333 33356789999988775555556
Q ss_pred cCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceee
Q 017194 167 LDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNIS 244 (375)
Q Consensus 167 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 244 (375)
..+.|..+|+............ . .......+++. .+.++++-...+.|..+|..++....
T Consensus 266 ~~~~I~~~d~dG~~~~~~~~~~--------~---~l~~P~gl~v~-------~~~lywtd~~~~~V~~~~~~~G~~~~ 325 (400)
T 3p5b_L 266 KLHSISSIDVNGGNRKTILEDE--------K---RLAHPFSLAVF-------EDKVFWTDIINEAIFSANRLTGSDVN 325 (400)
T ss_dssp TTTEEEEEETTSCCCEEEEECS--------S---TTSSEEEEEEE-------TTEEEEEESSSCSEEEEESSSCCCCE
T ss_pred CCCEEEEEeCCCCccEEEEeCC--------C---CCCCCEEEEEe-------CCEEEEecCCCCeEEEEEcCCCCceE
Confidence 6789999998754333222211 0 11234567764 35666666677889999976664443
No 272
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.84 E-value=1.3e-06 Score=77.96 Aligned_cols=214 Identities=11% Similarity=0.014 Sum_probs=134.6
Q ss_pred EEEEeC------CCCcEEEEecccCceeeEeeecCccE-----------------------------------------E
Q 017194 30 FVASSG------EDGCICWFDLRSKDVQLVTDVGNGPV-----------------------------------------T 62 (375)
Q Consensus 30 ~l~s~~------~d~~i~iw~~~~~~~~~~~~~~~~~v-----------------------------------------~ 62 (375)
.++.++ .++.|.-+|..+|+.+.........+ .
T Consensus 170 ~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~ 249 (582)
T 1flg_A 170 LLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQ 249 (582)
T ss_dssp EEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCS
T ss_pred EEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccC
Confidence 555554 37899999999999876543211000 1
Q ss_pred EEEEeCCCCeEEEEcC--------------------C----CeEEEEECCCCCcccccccccCCC--------cceeEEE
Q 017194 63 SLCFKSGNEDIIYVSS--------------------G----KEVKSFDVHMPASWRPLESYNYNK--------EEINQIV 110 (375)
Q Consensus 63 ~l~~~~~~~~l~~~~~--------------------d----~~i~iwd~~~~~~~~~~~~~~~~~--------~~v~~~~ 110 (375)
.+++.|+...++.+.. | +.|..+|.++++..-..+.. .|. .++. +.
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~-~~d~wd~~~~~~p~l-~~ 327 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHT-PNDAWDFSGNNELVL-FD 327 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESS-TTCCSCCCCCCCCEE-EE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCC-CCCcccccCCCCcEE-Ee
Confidence 2456666666666552 2 58999999988765443321 111 1221 12
Q ss_pred Ec-CCCC---eEEEEeCCCcEEEEeCcCceeeeeEecCcc-------------cc-------------------------
Q 017194 111 CN-PKSS---FLACADDGGDVKIIDIRQHCLYKSLRAGHS-------------SI------------------------- 148 (375)
Q Consensus 111 ~~-~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-------------~~------------------------- 148 (375)
.. .+++ .++.++.+|.++++|.++++.+..+. ... .+
T Consensus 328 ~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~-~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P 406 (582)
T 1flg_A 328 YKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFP-FVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSP 406 (582)
T ss_dssp EECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEE-SSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESS
T ss_pred eecCCCCEEEEEEEECCCceEEEEECCCCCEecccc-cccCccccccccccCCCEeEccccCCccccccccCCCceEECc
Confidence 21 4564 68889999999999999998877665 221 00
Q ss_pred -------eeEEEEeeCCCcEEEEee---------------------------------cCCeEEEeeCCCCCcceEEecC
Q 017194 149 -------CSSVQFIPWKPWEVISGG---------------------------------LDSKLVMWDFSKGRPNKIVNFG 188 (375)
Q Consensus 149 -------v~~~~~~~~~~~~l~~~~---------------------------------~d~~i~~wd~~~~~~~~~~~~~ 188 (375)
-..++++|+.. ++++.. .+|.|..||+.+++.+.+....
T Consensus 407 ~~~Gg~~w~~~a~dp~~g-~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~ 485 (582)
T 1flg_A 407 PFLGGKNWNPMAYSQDTG-LFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEH 485 (582)
T ss_dssp CTTCSSCSSCCEECTTTC-CEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEES
T ss_pred CCccccCCCCceECCCCC-EEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCC
Confidence 01345666655 333322 2578999999999988887644
Q ss_pred CCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeeccccccee
Q 017194 189 LPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDA 267 (375)
Q Consensus 189 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~ 267 (375)
.....-.+.. .+.++++++.||.++.||.++++...+...........+.+..+|++..
T Consensus 486 --------------~~~~~g~~~t------agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv 544 (582)
T 1flg_A 486 --------------LPLWAGVLAT------AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYL 544 (582)
T ss_dssp --------------SCCCSCCEEE------TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred --------------CCCcccceEe------CCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEE
Confidence 1111111111 3678888999999999999999988877665444444456667776543
No 273
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.84 E-value=3.3e-05 Score=65.56 Aligned_cols=188 Identities=9% Similarity=-0.023 Sum_probs=115.3
Q ss_pred EEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEE-cCCCeEEEEECCCCCcc-cccccccCCCccee
Q 017194 30 FVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYV-SSGKEVKSFDVHMPASW-RPLESYNYNKEEIN 107 (375)
Q Consensus 30 ~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~-~~~~~~~~~~~~v~ 107 (375)
+|+.+. ...|+..++........+. ....+..++|.+.+..|+.+ ...+.|+.+++...... ..............
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 444443 3578988988665444443 45678899999866655554 45678999988742110 11111111234567
Q ss_pred EEEEcCCCCeE-EEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeec-CCeEEEeeCCCCCcceEE
Q 017194 108 QIVCNPKSSFL-ACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGL-DSKLVMWDFSKGRPNKIV 185 (375)
Q Consensus 108 ~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~ 185 (375)
.+++.+.+..| ++-...+.|.+.+++.......+. ........|++.|.+.+++++-.. .+.|...++.. .....+
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~-~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG-~~~~~~ 240 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSL 240 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE-CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS-CSCEEE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe-CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC-CccEEE
Confidence 88998854444 454567889999987554444444 344567899999977644555423 47888888864 333333
Q ss_pred ecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe-cCCcEEEEeCCC
Q 017194 186 NFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK-GDGVVDVINIES 239 (375)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~ 239 (375)
... .-...+.|++++ ++..|+.+. ..+.|..+|+..
T Consensus 241 ~~~------------~l~~P~glavd~------~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 241 VTE------------NIQWPNGITLDL------LSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp ECS------------SCSCEEEEEEET------TTTEEEEEETTTTEEEEEETTS
T ss_pred EEC------------CCCceEEEEEEe------CCCEEEEEECCCCEEEEEeCCC
Confidence 211 124678999997 466666654 567899999874
No 274
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.82 E-value=4.6e-07 Score=83.72 Aligned_cols=156 Identities=13% Similarity=0.062 Sum_probs=95.6
Q ss_pred ceeEEEEe-cCCCCEEEEeC-CC----CcEEEEecccC-ceee-EeeecCccEEEEEEeCCCCeEEEEcCC-----CeEE
Q 017194 17 TATCCIAS-RDRPGFVASSG-ED----GCICWFDLRSK-DVQL-VTDVGNGPVTSLCFKSGNEDIIYVSSG-----KEVK 83 (375)
Q Consensus 17 ~i~~~~~~-~~~~~~l~s~~-~d----~~i~iw~~~~~-~~~~-~~~~~~~~v~~l~~~~~~~~l~~~~~d-----~~i~ 83 (375)
.+...+|| || |++||-+. .+ .+|+++|+.++ +.+. .+.. ....+.|+||++.|+....+ ..|+
T Consensus 175 ~~~~~~~S~PD-G~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPPE-HDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTTT-TCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCCC-CCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 57788999 99 78777432 22 35999999988 6322 1221 23468899999988887765 3688
Q ss_pred EEECCCCCccc-ccccccCCCcceeEEEEcCCCCeEEEEeC---CCcEEEEeCcCce-ee--eeEecCcccceeEEEEee
Q 017194 84 SFDVHMPASWR-PLESYNYNKEEINQIVCNPKSSFLACADD---GGDVKIIDIRQHC-LY--KSLRAGHSSICSSVQFIP 156 (375)
Q Consensus 84 iwd~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~-~~--~~~~~~~~~~v~~~~~~~ 156 (375)
++++.++.... .+... ........+.|+||+++|+..+. ...|+++|+.++. .. ..+.........++.|+.
T Consensus 251 ~~~lgt~~~~~~lv~~~-~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~ 329 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEE-HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG 329 (751)
T ss_dssp EEETTSCGGGCEEEEEC-CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET
T ss_pred EEECCCCchhcEEEEec-CCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee
Confidence 88887654221 11111 11234567899999999887653 3468889987652 12 333213344445555543
Q ss_pred CCCcEEEEeecC----CeEEEeeCCC
Q 017194 157 WKPWEVISGGLD----SKLVMWDFSK 178 (375)
Q Consensus 157 ~~~~~l~~~~~d----~~i~~wd~~~ 178 (375)
++.+++....+ ..|..+|+.+
T Consensus 330 -g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 330 -TSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp -TTEEEEEECTTTCTTCEEEEEETTS
T ss_pred -CCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 55345554443 3677777764
No 275
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.81 E-value=9.2e-05 Score=69.00 Aligned_cols=328 Identities=10% Similarity=0.028 Sum_probs=175.8
Q ss_pred CceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEee-------ecCccEEEEEEeCCCCeEEEEcCCCeEEEEECC
Q 017194 16 ATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTD-------VGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVH 88 (375)
Q Consensus 16 ~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~-------~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~ 88 (375)
..|.++...++ +.+. .|..++-|..||..+++...... .....|.++...+++...+ ++.+ -+.+||..
T Consensus 163 ~~i~~i~~d~~-g~lw-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~ 238 (781)
T 3v9f_A 163 EQTWTATEAED-GKLY-IGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWI-GTSK-GLALFNAN 238 (781)
T ss_dssp CCEEEEEEEET-TEEE-EEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEE-EETT-EEEEEETT
T ss_pred cceEEEEECCC-CCEE-EEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEE-EeCC-cHheECCC
Confidence 45788777776 5444 45555458889987765422111 1135688998888886554 4444 68999987
Q ss_pred CCCcccccccc-----cCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEe-------------cCccccee
Q 017194 89 MPASWRPLESY-----NYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLR-------------AGHSSICS 150 (375)
Q Consensus 89 ~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------------~~~~~~v~ 150 (375)
+++. ..+... ......|.++...+++. |..|+..+-|.++|..+++...... ......|.
T Consensus 239 ~~~~-~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~ 316 (781)
T 3v9f_A 239 TETF-TNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASAR 316 (781)
T ss_dssp TTEE-EC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEE
T ss_pred CCcE-EEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEE
Confidence 5432 222111 11245688998888774 5566665668899987654321100 01245788
Q ss_pred EEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCC
Q 017194 151 SVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDG 230 (375)
Q Consensus 151 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg 230 (375)
++...++|. |..|+.++-|..++...... ..+... +.. ..........|.++...+ ++ .|.+|+.++
T Consensus 317 ~i~~D~~g~--lWigt~~~Gl~~~~~~~~~~-~~~~~~-~~~--~~~~~l~~~~v~~i~~d~------~g-~lWigt~~~ 383 (781)
T 3v9f_A 317 YIFQDSFNN--IWIGTWGGGINFISNAPPTF-HTWSYS-PTQ--MNESSLSNKVVSSVCDDG------QG-KLWIGTDGG 383 (781)
T ss_dssp EEEECSSCC--EEEEEBSSCEEEECSSCCSC-EEEC-----C--CCSSCCSSSCEEEEEECT------TS-CEEEEEBSS
T ss_pred EEEEeCCCC--EEEEecCCeEEEeCCCCCcc-eeeccC-ccc--cccCCCCCcceEEEEEcC------CC-CEEEEeCCC
Confidence 998888875 77888778899999775543 233211 000 000111235688888865 44 466677667
Q ss_pred cEEEEeCCCcceeeccc--ccCCCCCCceeecccccceeee--eeeecCCc--ceeEeeeeecCCCccEEEEEEeecCCC
Q 017194 231 VVDVINIESELNISRSK--STTKPLKGSQSTSKVNIRDAEM--EILDQSGG--KRLHLDYSVGGHTAAASCVAFSMFGER 304 (375)
Q Consensus 231 ~i~i~d~~~~~~~~~~~--~~~~~~~~~~~~s~~g~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~s~~~~~ 304 (375)
-|..||..+........ ......+.++...++|...+.. +.....+. ...+...........|.++... ++
T Consensus 384 Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d---~~ 460 (781)
T 3v9f_A 384 GINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYED---KN 460 (781)
T ss_dssp CEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEEC---TT
T ss_pred cEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEEC---CC
Confidence 79999987653322111 1112334445555566554431 22222111 1122111101234678888887 77
Q ss_pred CcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEe
Q 017194 305 GKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYS 373 (375)
Q Consensus 305 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~ 373 (375)
|.+.+.. . +-|..||..+.+...... ..........|.+++..+ +|.+.+....+| |..|+
T Consensus 461 g~lwigt-~-~Gl~~~~~~~~~~~~~~~----~~~~~~~~~~i~~i~~d~-~g~lWigt~~~G-l~~~~ 521 (781)
T 3v9f_A 461 KKIWIGT-H-AGVFVIDLASKKVIHHYD----TSNSQLLENFVRSIAQDS-EGRFWIGTFGGG-VGIYT 521 (781)
T ss_dssp SEEEEEE-T-TEEEEEESSSSSCCEEEC----TTTSSCSCSCEEEEEECT-TCCEEEEESSSC-EEEEC
T ss_pred CCEEEEE-C-CceEEEeCCCCeEEeccc----CcccccccceeEEEEEcC-CCCEEEEEcCCC-EEEEe
Confidence 7655544 4 458899987753211000 000001135688888777 666544433344 55554
No 276
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.81 E-value=8.4e-06 Score=69.94 Aligned_cols=156 Identities=11% Similarity=0.078 Sum_probs=94.2
Q ss_pred ceeEEEEecC-CCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCC-----eEEEEECCCC
Q 017194 17 TATCCIASRD-RPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGK-----EVKSFDVHMP 90 (375)
Q Consensus 17 ~i~~~~~~~~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~-----~i~iwd~~~~ 90 (375)
....++|.|+ +...|..+...+.|+.++..++...... ........++++++|+ |+.+...+ .+...+...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence 3567899984 1334444443388999998877654433 3455688999999999 44444321 2333332211
Q ss_pred CcccccccccCCCcceeEEEEcC-CCCeEEEEeCCCcEEEEeCcCceeeeeE-ecCcccceeEEEEeeCCCcEEEEeecC
Q 017194 91 ASWRPLESYNYNKEEINQIVCNP-KSSFLACADDGGDVKIIDIRQHCLYKSL-RAGHSSICSSVQFIPWKPWEVISGGLD 168 (375)
Q Consensus 91 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d 168 (375)
......+. .......++++| ++.++++-..++.|+.+|..++.....+ ..+.......++|+|++++++++-...
T Consensus 218 --~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~ 294 (433)
T 4hw6_A 218 --FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK 294 (433)
T ss_dssp --TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT
T ss_pred --eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC
Confidence 11000111 123456788999 5655555556788999998877652222 212222335799999998556666677
Q ss_pred CeEEEeeCC
Q 017194 169 SKLVMWDFS 177 (375)
Q Consensus 169 ~~i~~wd~~ 177 (375)
+.|+.+++.
T Consensus 295 ~~I~~~~~d 303 (433)
T 4hw6_A 295 HCIYRVDYN 303 (433)
T ss_dssp TEEEEEEBC
T ss_pred CEEEEEeCC
Confidence 899998865
No 277
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.80 E-value=5e-06 Score=71.34 Aligned_cols=261 Identities=8% Similarity=0.022 Sum_probs=142.1
Q ss_pred cEEEEEEeCC--CCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCC-----cEEEEeC
Q 017194 60 PVTSLCFKSG--NEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGG-----DVKIIDI 132 (375)
Q Consensus 60 ~v~~l~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~ 132 (375)
....++|.|+ ...|+.+...+.|+.+|..++....... .......++++++++ |+++...+ .+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~----~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT----NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC----CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec----CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence 4568899984 3445555444899999987654322222 245688999999999 55544321 2333333
Q ss_pred cCcee-eeeEecCcccceeEEEEee-CCCcEEEEeecCCeEEEeeCCCCCcceEE-ecCCCCCCCCCCcccCCCceeEEe
Q 017194 133 RQHCL-YKSLRAGHSSICSSVQFIP-WKPWEVISGGLDSKLVMWDFSKGRPNKIV-NFGLPENNGNAGQCYNPAFVHAIA 209 (375)
Q Consensus 133 ~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~ 209 (375)
..+.. ...+. .......++++| ++. ++++-..++.|+.+|..++.....+ ... .......++
T Consensus 215 ~~~~~~~~~~~--~~~~P~giavd~~~G~-lyv~d~~~~~V~~~d~~~g~~~~~~~~~~------------~~~~~~~ia 279 (433)
T 4hw6_A 215 ASGFTERLSLC--NARGAKTCAVHPQNGK-IYYTRYHHAMISSYDPATGTLTEEEVMMD------------TKGSNFHIV 279 (433)
T ss_dssp GGTTCCEEEEE--ECSSBCCCEECTTTCC-EEECBTTCSEEEEECTTTCCEEEEEEECS------------CCSSCEEEE
T ss_pred CCCeecccccc--ccCCCCEEEEeCCCCe-EEEEECCCCEEEEEECCCCeEEEEEeccC------------CCCCcccEE
Confidence 22211 11222 233457789999 554 5666667789999998877652332 222 112234699
Q ss_pred ecCCccccCCCCEEEEE-ecCCcEEEEeCCCcceee----cccccCCCCCCceeecccccceeeeeeeecCCcceeEeee
Q 017194 210 IPDADMLDKTNKICVVA-KGDGVVDVINIESELNIS----RSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDY 284 (375)
Q Consensus 210 ~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~----~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~ 284 (375)
++| +++.|+++ ...+.|+.++........ ......... . ..+|.
T Consensus 280 ~dp------dG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~----g-~~dg~-------------------- 328 (433)
T 4hw6_A 280 WHP------TGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSP----G-WVDGM-------------------- 328 (433)
T ss_dssp ECT------TSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCC----C-CBCEE--------------------
T ss_pred EeC------CCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCC----c-cCCCc--------------------
Confidence 998 78855555 456789998865311000 000000000 0 00000
Q ss_pred eecCCCccEEEEEE---------eecCCCCcEEEEecCCCeEEEEeCCCceeeeecchhh--hh------hhhcccccce
Q 017194 285 SVGGHTAAASCVAF---------SMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINND--LL------IKNINLNKKV 347 (375)
Q Consensus 285 ~~~~~~~~v~~~~~---------s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~------~~~~~~~~~v 347 (375)
.....-.....+++ . ++|.++++-...+.|+.++. ++.......... .. ......-...
T Consensus 329 ~~~a~~~~P~giav~~n~~y~~dd---~~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P 404 (433)
T 4hw6_A 329 GTGARLWGPNQGIFVKNEAYAGEE---DEYDFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHP 404 (433)
T ss_dssp GGGSBCSSEEEEEEEECGGGTTSS---CCEEEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSE
T ss_pred ccceEEcCCccEEEEccccccccC---CCCcEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCC
Confidence 00111234567888 6 67777777777888999985 332211100000 00 0000112346
Q ss_pred eeeeecCCCCCcEEEeeCCCeEEEEecC
Q 017194 348 NWLCTTPTESENLVVCDTSKVVKVYSIS 375 (375)
Q Consensus 348 ~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 375 (375)
..+++.|.++.++++=...++|+..+++
T Consensus 405 ~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 405 TSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred cEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 7899995477766666677899988764
No 278
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.80 E-value=3.9e-06 Score=72.03 Aligned_cols=155 Identities=8% Similarity=0.128 Sum_probs=97.0
Q ss_pred cEEEEEEeC-CCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCC-C----cEEEEeCc
Q 017194 60 PVTSLCFKS-GNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDG-G----DVKIIDIR 133 (375)
Q Consensus 60 ~v~~l~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g----~i~iwd~~ 133 (375)
....|+++| ++..|+.+...+.|+.+|+..+....... .......++|++++++|+++... + .+.+++.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~----~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~- 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS----GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR- 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC----CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec----CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-
Confidence 456889998 45556666555889999988643222221 24567899999999966666542 2 2444443
Q ss_pred Cceee--eeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeec
Q 017194 134 QHCLY--KSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIP 211 (375)
Q Consensus 134 ~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 211 (375)
.+... ..+. .......++++|++.+++++-..++.|..++...+......... .......++++
T Consensus 213 ~g~~~~~~~l~--~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~------------~~~~P~gia~~ 278 (430)
T 3tc9_A 213 ESGFKVITELT--KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ------------DSGWEFHIQFH 278 (430)
T ss_dssp GGTSCSEEEEE--ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECS------------SSSCCEEEEEC
T ss_pred CCceeeeeeec--cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC------------CCCcceeEEEc
Confidence 33222 2332 22346788999943336667667889999998865542333322 12356789999
Q ss_pred CCccccCCCCEEEEE-ecCCcEEEEeCCC
Q 017194 212 DADMLDKTNKICVVA-KGDGVVDVINIES 239 (375)
Q Consensus 212 ~~~~~~~~~~~l~~~-~~dg~i~i~d~~~ 239 (375)
| ++++|+++ ...+.|..++...
T Consensus 279 p------dG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 279 P------SGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp T------TSSEEEEEETTTTEEEEEEEET
T ss_pred C------CCCEEEEEECCCCEEEEEeCCc
Confidence 9 78855554 4677899987653
No 279
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.80 E-value=1.1e-05 Score=69.25 Aligned_cols=155 Identities=14% Similarity=0.104 Sum_probs=99.0
Q ss_pred ceeEEEEec-CCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCC-C----eEEEEECCCC
Q 017194 17 TATCCIASR-DRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSG-K----EVKSFDVHMP 90 (375)
Q Consensus 17 ~i~~~~~~~-~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-~----~i~iwd~~~~ 90 (375)
....|+++| +++ .|..+...+.|+.+|+..+.... +.........++|++++++|+.+... + .+...+.. +
T Consensus 138 ~P~~lavdp~~~g-~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHN-HLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-S 214 (430)
T ss_dssp CCCEEEEETTEEE-EEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-G
T ss_pred CCCEEEECCCCCC-eEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-C
Confidence 356789998 434 44444444789999988765433 33345668899999999966666542 1 34444433 2
Q ss_pred Ccc--cccccccCCCcceeEEEEcC-CCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeec
Q 017194 91 ASW--RPLESYNYNKEEINQIVCNP-KSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGL 167 (375)
Q Consensus 91 ~~~--~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 167 (375)
... ..+.. ......++++| ++.++++-..++.|..++...+........+.......++|+|++++++++-..
T Consensus 215 ~~~~~~~l~~----~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 215 GFKVITELTK----GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp TSCSEEEEEE----CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred ceeeeeeecc----CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC
Confidence 211 11221 23467788999 666555655778999999886654333331222457899999999855666667
Q ss_pred CCeEEEeeCCC
Q 017194 168 DSKLVMWDFSK 178 (375)
Q Consensus 168 d~~i~~wd~~~ 178 (375)
.+.|..++...
T Consensus 291 ~~~I~~~~~d~ 301 (430)
T 3tc9_A 291 QHYILRSDYDW 301 (430)
T ss_dssp TTEEEEEEEET
T ss_pred CCEEEEEeCCc
Confidence 88999988753
No 280
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.80 E-value=2.4e-06 Score=76.14 Aligned_cols=210 Identities=9% Similarity=0.046 Sum_probs=131.7
Q ss_pred CCCcEEEEecccCceeeEeeecCcc-------------------------------------E-EEEEEeCCCCeEEEEc
Q 017194 36 EDGCICWFDLRSKDVQLVTDVGNGP-------------------------------------V-TSLCFKSGNEDIIYVS 77 (375)
Q Consensus 36 ~d~~i~iw~~~~~~~~~~~~~~~~~-------------------------------------v-~~l~~~~~~~~l~~~~ 77 (375)
.+|.|+.+|.++|+.+..+...... + ..+++.++...++.+.
T Consensus 180 ~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~ 259 (599)
T 1w6s_A 180 VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGT 259 (599)
T ss_dssp CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeC
Confidence 3789999999999987766532111 0 1345566677777776
Q ss_pred CC----------------CeEEEEECCCCCccccccccc-------CCCcceeEEEEc-CCC---CeEEEEeCCCcEEEE
Q 017194 78 SG----------------KEVKSFDVHMPASWRPLESYN-------YNKEEINQIVCN-PKS---SFLACADDGGDVKII 130 (375)
Q Consensus 78 ~d----------------~~i~iwd~~~~~~~~~~~~~~-------~~~~~v~~~~~~-~~~---~~l~~~~~dg~i~iw 130 (375)
.+ +.|..+|.++++..-..+... ....++. +... .++ +.++.++.+|.++++
T Consensus 260 g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~l 338 (599)
T 1w6s_A 260 GNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTL 338 (599)
T ss_dssp CCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEE
T ss_pred CCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEE
Confidence 54 389999999887654433221 0111221 2222 466 467778899999999
Q ss_pred eCcCceeeeeEecCc-----------c-cce--------------------------eEEEEeeCCCcEEEEe-------
Q 017194 131 DIRQHCLYKSLRAGH-----------S-SIC--------------------------SSVQFIPWKPWEVISG------- 165 (375)
Q Consensus 131 d~~~~~~~~~~~~~~-----------~-~~v--------------------------~~~~~~~~~~~~l~~~------- 165 (375)
|.++++.+....... . .++ ..++++|+.. ++++.
T Consensus 339 D~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~-~~yv~~~~~~~~ 417 (599)
T 1w6s_A 339 DRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRE-LFFMGINHICMD 417 (599)
T ss_dssp ETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT-EEEEEEECEEEE
T ss_pred ECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCC-EEEEecccccee
Confidence 999998876654111 0 011 2356666655 33332
Q ss_pred --------------------------e------cCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCC
Q 017194 166 --------------------------G------LDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDA 213 (375)
Q Consensus 166 --------------------------~------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 213 (375)
+ ..|.|..||+.+++.+.+..... +..-..+..
T Consensus 418 ~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~------------~~~~g~~~t--- 482 (599)
T 1w6s_A 418 WEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERF------------AVWGGTMAT--- 482 (599)
T ss_dssp EEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESS------------CCCSBCEEE---
T ss_pred eecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCC------------CccCcceEe---
Confidence 1 34789999999999888776431 110011221
Q ss_pred ccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeeccccccee
Q 017194 214 DMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDA 267 (375)
Q Consensus 214 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~ 267 (375)
.+.+++.++.||.|+.||.++++.+.+...........+.+..+|++.+
T Consensus 483 -----agg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv 531 (599)
T 1w6s_A 483 -----AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYV 531 (599)
T ss_dssp -----TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred -----cCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEE
Confidence 4778888999999999999999988877655444444455667776443
No 281
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.75 E-value=2.4e-05 Score=61.27 Aligned_cols=171 Identities=6% Similarity=0.101 Sum_probs=105.8
Q ss_pred eeecCccEEEEEEeCCCCeEEE-EcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeC
Q 017194 54 TDVGNGPVTSLCFKSGNEDIIY-VSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDI 132 (375)
Q Consensus 54 ~~~~~~~v~~l~~~~~~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 132 (375)
+.+-...+..++|.|++..|++ ...++.|...|.. ++..+.+.. .+ ......+++.+++.++++.-.++.+.++++
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l-~g-~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPL-DF-VKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEEC-SS-CSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEec-CC-CCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 3344567999999998776665 5557788888987 554444322 21 256778889888877666656788999887
Q ss_pred cCcee---eeeEec-----CcccceeEEEEeeCCCcEEEEeecCCeEEEeeCC---CCCcceEEecCCCCCCCCCCcccC
Q 017194 133 RQHCL---YKSLRA-----GHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFS---KGRPNKIVNFGLPENNGNAGQCYN 201 (375)
Q Consensus 133 ~~~~~---~~~~~~-----~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~---~~~~~~~~~~~~~~~~~~~~~~~~ 201 (375)
..... +..... ..+.....++|.|.++ .|.++.+.....+|.++ ....+..+... .. .....
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~-~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~--~~----~~~~~ 171 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDH-TFWFFKEKNPIEVYKVNGLLSSNELHISKDK--AL----QRQFT 171 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTT-EEEEEEESSSEEEEEEESTTCSSCCEEEECH--HH----HHTCC
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCC-EEEEEECcCCceEEEEcccccCCceeeecch--hh----ccccc
Confidence 64432 222210 2344568999999987 45555554444454443 11122222110 00 00001
Q ss_pred CCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCC
Q 017194 202 PAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIES 239 (375)
Q Consensus 202 ~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 239 (375)
...+.++++.|. .+.+++.....+.|..+|...
T Consensus 172 ~~d~S~l~~dp~-----tg~lliLS~~s~~L~~~d~~g 204 (255)
T 3qqz_A 172 LDDVSGAEFNQQ-----KNTLLVLSHESRALQEVTLVG 204 (255)
T ss_dssp SSCCCEEEEETT-----TTEEEEEETTTTEEEEECTTC
T ss_pred cCCceeEEEcCC-----CCeEEEEECCCCeEEEEcCCC
Confidence 235689999996 677888888888999999875
No 282
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.73 E-value=7.9e-05 Score=68.61 Aligned_cols=188 Identities=9% Similarity=-0.031 Sum_probs=113.7
Q ss_pred EEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEE-EEcCCCeEEEEECCCCCcc-cccccccCCCccee
Q 017194 30 FVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDII-YVSSGKEVKSFDVHMPASW-RPLESYNYNKEEIN 107 (375)
Q Consensus 30 ~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~~v~ 107 (375)
+|+.+.. ..|+..++...+....+. ....+..|+|.+....|+ +-...+.|+.+++...... .....+........
T Consensus 397 ~Ll~an~-~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 397 YLFFTNR-HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp EEEEECB-SSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred ccccccc-cceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 4443333 468888887665444333 456678999998555554 4455678999998742110 11111111234567
Q ss_pred EEEEcCCCCeEEEE-eCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecC-CeEEEeeCCCCCcceEE
Q 017194 108 QIVCNPKSSFLACA-DDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLD-SKLVMWDFSKGRPNKIV 185 (375)
Q Consensus 108 ~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~i~~wd~~~~~~~~~~ 185 (375)
.|++.+.++.|+.+ ...+.|.+.++........+. ........|++.|.+.+++++-... +.|...++.. .....+
T Consensus 475 GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~-~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG-~~~~~l 552 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSL 552 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEE
T ss_pred eeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEe-CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC-CceEEE
Confidence 89998877555544 467889999987554433333 3445689999999866455554333 7899998864 444443
Q ss_pred ecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe-cCCcEEEEeCCC
Q 017194 186 NFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK-GDGVVDVINIES 239 (375)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~ 239 (375)
... .-.....|++.+ .+..|+.+. ..+.|..+++..
T Consensus 553 v~~------------~l~~P~GLavD~------~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 553 VTE------------NIQWPNGITLDL------LSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp ECS------------SCSCEEEEEEET------TTTEEEEEETTTTEEEEEETTS
T ss_pred EeC------------CCCCceEEEEec------CCCeEEEEeCCCCcEEEEecCC
Confidence 322 124678999987 455555554 556788888864
No 283
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.70 E-value=7e-05 Score=61.36 Aligned_cols=181 Identities=8% Similarity=0.005 Sum_probs=109.7
Q ss_pred CCcEEEEecccCce-eeEeeecCccEEEEEEeCCCCeEE-EEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCC
Q 017194 37 DGCICWFDLRSKDV-QLVTDVGNGPVTSLCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPK 114 (375)
Q Consensus 37 d~~i~iw~~~~~~~-~~~~~~~~~~v~~l~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 114 (375)
...|+..++..... ...+-..-....+++|.+.+..|+ +-...+.|..+++........+.. ..-.....+++.+.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~--~~l~~p~glavd~~ 89 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV--SGLLSPDGLACDWL 89 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEE--ECCSCCCEEEEETT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEc--CCCCCccEEEEEcC
Confidence 35799999886642 222222234567899998655554 445568899999875432111111 11235667889875
Q ss_pred CCeE-EEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEee-cCCeEEEeeCCCCCcceEEecCCCCC
Q 017194 115 SSFL-ACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGG-LDSKLVMWDFSKGRPNKIVNFGLPEN 192 (375)
Q Consensus 115 ~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~~ 192 (375)
+..| ++-...+.|.+++++.......+. ........+++.|.+..++++-. ..+.|...++. +.....+...
T Consensus 90 ~g~ly~~d~~~~~I~~~~~dG~~~~~l~~-~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~---- 163 (318)
T 3sov_A 90 GEKLYWTDSETNRIEVSNLDGSLRKVLFW-QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINS---- 163 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEEC-SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT-SCSCEEEECS----
T ss_pred CCeEEEEECCCCEEEEEECCCCcEEEEEe-CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC-CCCeEEEEEC----
Confidence 5444 444567789999986543322232 33456789999997664444432 35788888876 3333333211
Q ss_pred CCCCCcccCCCceeEEeecCCccccCCCCEEEEEe-cCCcEEEEeCCC
Q 017194 193 NGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK-GDGVVDVINIES 239 (375)
Q Consensus 193 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~ 239 (375)
.-...+.|+++| ++..|+.+. ..+.|..+|+..
T Consensus 164 --------~l~~Pnglavd~------~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 164 --------EIYWPNGLTLDY------EEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp --------SCSCEEEEEEET------TTTEEEEEETTTTEEEEEETTS
T ss_pred --------CCCCccEEEEec------cCCEEEEEECCCCEEEEEcCCC
Confidence 124568999998 456555554 567899998874
No 284
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.70 E-value=7.4e-05 Score=61.21 Aligned_cols=204 Identities=9% Similarity=-0.066 Sum_probs=129.4
Q ss_pred ceeEEEEecCCCCEEEEeCCCCcEEEEecccCcee-eEeeecCccEEEEEEeCCCCe-EEEEcCCCeEEEEECCCCCccc
Q 017194 17 TATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQ-LVTDVGNGPVTSLCFKSGNED-IIYVSSGKEVKSFDVHMPASWR 94 (375)
Q Consensus 17 ~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~-~~~~~~~~~v~~l~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~ 94 (375)
....++|.+.++.++.+-...+.|..+++..+... ..+...-.....+++.+.+.. .++-...+.|.++++.... ..
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~ 114 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-RK 114 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc-EE
Confidence 46678999874666666667788999998766432 223333345678899875444 4455556899999987432 22
Q ss_pred ccccccCCCcceeEEEEcCCCCeEEEEeC--CCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEE
Q 017194 95 PLESYNYNKEEINQIVCNPKSSFLACADD--GGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLV 172 (375)
Q Consensus 95 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~ 172 (375)
.+. .........+++.|.+..|+.+.. .+.|...+++.. ....+....-...+.|+++|++..++++=+..+.|.
T Consensus 115 ~l~--~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~ 191 (318)
T 3sov_A 115 VLF--WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIH 191 (318)
T ss_dssp EEE--CSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEE--eCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC-CeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEE
Confidence 221 112345688999987667666653 578888887533 333332022345689999997775566666778999
Q ss_pred EeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceee
Q 017194 173 MWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNIS 244 (375)
Q Consensus 173 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 244 (375)
.+|+.. .....+... .......+++.. +.++.+-...+.|..++..+++...
T Consensus 192 ~~d~dG-~~~~~~~~~------------~~~~P~glav~~-------~~lywtd~~~~~V~~~~~~~G~~~~ 243 (318)
T 3sov_A 192 KSNLDG-TNRQAVVKG------------SLPHPFALTLFE-------DILYWTDWSTHSILACNKYTGEGLR 243 (318)
T ss_dssp EEETTS-CSCEEEECS------------CCSCEEEEEEET-------TEEEEEETTTTEEEEEETTTCCSCE
T ss_pred EEcCCC-CceEEEecC------------CCCCceEEEEeC-------CEEEEEecCCCeEEEEECCCCCceE
Confidence 999874 333333311 123456777753 5566666677899999987765443
No 285
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.69 E-value=2.3e-06 Score=77.91 Aligned_cols=201 Identities=10% Similarity=0.009 Sum_probs=110.8
Q ss_pred eeEEEEecCCCCEEEEeCC-CCcEEEEecccCceeeEeeecC-ccEEEEEEeCCCCeEEEEc-CC-----CeEEEEECCC
Q 017194 18 ATCCIASRDRPGFVASSGE-DGCICWFDLRSKDVQLVTDVGN-GPVTSLCFKSGNEDIIYVS-SG-----KEVKSFDVHM 89 (375)
Q Consensus 18 i~~~~~~~~~~~~l~s~~~-d~~i~iw~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~~~~-~d-----~~i~iwd~~~ 89 (375)
..++++.++ +++++.|+. +..+.+||..+++-...-..+. ..-.+++..++++.++.|+ .+ ..+.+||..+
T Consensus 245 ~~~~~~~~~-g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 245 CPGISMDGN-GQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp SCEEEECTT-SCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred cccccCCCC-CCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 344677777 789999884 4589999988765432222121 1223455667899888888 34 5799999986
Q ss_pred CCcccccccc---cCCCcceeEEEEcCCCCeEEEEeCCC---------cEEEEeCcCceeeeeEecCccc---------c
Q 017194 90 PASWRPLESY---NYNKEEINQIVCNPKSSFLACADDGG---------DVKIIDIRQHCLYKSLRAGHSS---------I 148 (375)
Q Consensus 90 ~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg---------~i~iwd~~~~~~~~~~~~~~~~---------~ 148 (375)
++ +..+... ...... ....+..++..++.|+.+| .+..||..+..-..... .+.. .
T Consensus 324 ~~-W~~~~~~~~~p~~~~~-~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~-~~~~~~~~~~~~~~ 400 (656)
T 1k3i_A 324 KT-WTSLPNAKVNPMLTAD-KQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAG-KRQSNRGVAPDAMC 400 (656)
T ss_dssp TE-EEEETTSCSGGGCCCC-TTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEE-ECEETTEECCCCBT
T ss_pred Cc-ceeCCCcccccccccc-ccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCC-ccccccccCCCCCC
Confidence 53 3332110 000000 0112234555555555443 56788887665333222 1111 2
Q ss_pred eeEEEEeeCCCcEEEEeecCC-----------eEEEeeCCCCCcceEE--ecCCCCCCCCCCcccCCCceeEEeecCCcc
Q 017194 149 CSSVQFIPWKPWEVISGGLDS-----------KLVMWDFSKGRPNKIV--NFGLPENNGNAGQCYNPAFVHAIAIPDADM 215 (375)
Q Consensus 149 v~~~~~~~~~~~~l~~~~~d~-----------~i~~wd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 215 (375)
-.++.|...+..+++.|+.++ .+.+||..+.+..... ... .+..-.+..+.|
T Consensus 401 ~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp------------~~R~~~~~~~l~--- 465 (656)
T 1k3i_A 401 GNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLY------------FARTFHTSVVLP--- 465 (656)
T ss_dssp CEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCS------------SCCBSCEEEECT---
T ss_pred CceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCC------------CCcccCCeEECC---
Confidence 244444443333788887543 6778887765543322 111 112223445555
Q ss_pred ccCCCCEEEEEecC-----------CcEEEEeCCCc
Q 017194 216 LDKTNKICVVAKGD-----------GVVDVINIESE 240 (375)
Q Consensus 216 ~~~~~~~l~~~~~d-----------g~i~i~d~~~~ 240 (375)
++++++.|+.+ ..+.+||..+.
T Consensus 466 ---~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 466 ---DGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp ---TSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred ---CCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 78999998754 45788887653
No 286
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.62 E-value=0.00013 Score=62.94 Aligned_cols=156 Identities=12% Similarity=0.102 Sum_probs=98.2
Q ss_pred eeEEEEec-CCCCEEEEeCCCCcEEEEecccCceeeEeeec---CccEEEEEE-------eCCCCeEEEEcCCC------
Q 017194 18 ATCCIASR-DRPGFVASSGEDGCICWFDLRSKDVQLVTDVG---NGPVTSLCF-------KSGNEDIIYVSSGK------ 80 (375)
Q Consensus 18 i~~~~~~~-~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~---~~~v~~l~~-------~~~~~~l~~~~~d~------ 80 (375)
-..|+|.| +.++++++....+.|++.|++++.....+... ......++| ++++++|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 56789998 33455555554567999998877654444321 235889999 99999777666543
Q ss_pred -eEEEEECCC-CCcc-----cccccccCCCcceeEEEEcCCCCe-EEEEeCCCcEEEEeCc-------Ccee--------
Q 017194 81 -EVKSFDVHM-PASW-----RPLESYNYNKEEINQIVCNPKSSF-LACADDGGDVKIIDIR-------QHCL-------- 137 (375)
Q Consensus 81 -~i~iwd~~~-~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~-------~~~~-------- 137 (375)
.|.+.+... +... ..+..+ .....++++|++.. +++-..++.|..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~----~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAY----KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEE----SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred ceEEEEecCCCCceeecccceeeccC----CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc
Confidence 366666443 1111 122222 24567889995545 5555577889999997 4543
Q ss_pred ---eee-EecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCC
Q 017194 138 ---YKS-LRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFS 177 (375)
Q Consensus 138 ---~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 177 (375)
... +..+.......|+|+|+++.++++-+....|+.++..
T Consensus 297 ~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 297 PNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp TTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 112 2212234568999999998445555677889986654
No 287
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.61 E-value=0.00024 Score=65.53 Aligned_cols=210 Identities=12% Similarity=0.028 Sum_probs=128.2
Q ss_pred CCCceeEEEEecCCCCEEEEeCCCCcEEEEecccC----ceeeEeeecCccEEEEEEeCCCCeEEE-EcCCCeEEEEECC
Q 017194 14 HKATATCCIASRDRPGFVASSGEDGCICWFDLRSK----DVQLVTDVGNGPVTSLCFKSGNEDIIY-VSSGKEVKSFDVH 88 (375)
Q Consensus 14 h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~----~~~~~~~~~~~~v~~l~~~~~~~~l~~-~~~d~~i~iwd~~ 88 (375)
....+..++|.+.++.++++-...+.|+.+++... .....+...-.....|++.+.++.|+. -...+.|.+.++.
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 34557789999864566666667788998888753 223333323456678999887755554 4556899999987
Q ss_pred CCCcccccccccCCCcceeEEEEcCCCCeEEEEeC--CCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEee
Q 017194 89 MPASWRPLESYNYNKEEINQIVCNPKSSFLACADD--GGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGG 166 (375)
Q Consensus 89 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 166 (375)
... ...+.. ........|++.|.+.+|+.... .+.|...++........+. ..-...+.|++.+.+..++++=.
T Consensus 502 G~~-~~~l~~--~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~-~~l~~P~GLavD~~~~~LYwaD~ 577 (791)
T 3m0c_C 502 GVK-RKTLFR--ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-ENIQWPNGITLDLLSGRLYWVDS 577 (791)
T ss_dssp SSS-EEEEEE--CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC-SSCSCEEEEEEETTTTEEEEEET
T ss_pred CCe-EEEEEe--CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe-CCCCCceEEEEecCCCeEEEEeC
Confidence 433 222211 11345789999998667666653 2678888886444333333 33457899999987774555555
Q ss_pred cCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeec
Q 017194 167 LDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISR 245 (375)
Q Consensus 167 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 245 (375)
....|..+++........+... . .-....+|++.. +.++++-...+.|...|..++.....
T Consensus 578 ~~~~I~~~d~dG~~~~~v~~~~--------~---~l~~P~glav~~-------~~lYwtD~~~~~I~~~dk~tG~~~~~ 638 (791)
T 3m0c_C 578 KLHSISSIDVNGGNRKTILEDE--------K---RLAHPFSLAVFE-------DKVFWTDIINEAIFSANRLTGSDVNL 638 (791)
T ss_dssp TTTEEEEEETTSCSCEEEEECT--------T---TTSSEEEEEEET-------TEEEEEETTTTEEEEEETTTCCCCEE
T ss_pred CCCcEEEEecCCCceEEEecCC--------C---ccCCCCEEEEeC-------CEEEEEECCCCEEEEEeCCCCcceEE
Confidence 6778999998744433333211 0 012345666642 44555555667888888776654433
No 288
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.57 E-value=5.7e-05 Score=61.48 Aligned_cols=188 Identities=6% Similarity=0.095 Sum_probs=119.4
Q ss_pred CEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCC----CCe--EE-EEcC---CCeEEEEECC--CCCccccc
Q 017194 29 GFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSG----NED--II-YVSS---GKEVKSFDVH--MPASWRPL 96 (375)
Q Consensus 29 ~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~----~~~--l~-~~~~---d~~i~iwd~~--~~~~~~~~ 96 (375)
.+++.....+-+.+||+ +|+.++.+.. +.++.+..-|+ |+. ++ +... +++|.+|++. ++ .+..+
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~~i 116 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQSM 116 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEEEC
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-ceeec
Confidence 45555556678999999 7888888763 56777777662 222 33 3333 4789999774 32 23333
Q ss_pred ccc--c--CCCcceeEEEE--cCC-CC-eEEEEeCCCcEEEEeCc-------CceeeeeEecCcccceeEEEEeeCCCcE
Q 017194 97 ESY--N--YNKEEINQIVC--NPK-SS-FLACADDGGDVKIIDIR-------QHCLYKSLRAGHSSICSSVQFIPWKPWE 161 (375)
Q Consensus 97 ~~~--~--~~~~~v~~~~~--~~~-~~-~l~~~~~dg~i~iwd~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 161 (375)
... . .....+..+++ +|. ++ ++++...+|.+..|++. +.+.+++|. ..+.+..+...+... .
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~--lgsq~EgcvvDd~~g-~ 193 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK--MNSQTEGMAADDEYG-R 193 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE--CSSCEEEEEEETTTT-E
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec--CCCCcceEEEcCCCC-e
Confidence 211 1 11155677787 774 44 57888889999999983 346678887 456788999998777 7
Q ss_pred EEEeecCCeEEEeeCCC-----CCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCC-EEEEEe-cCCcEEE
Q 017194 162 VISGGLDSKLVMWDFSK-----GRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNK-ICVVAK-GDGVVDV 234 (375)
Q Consensus 162 l~~~~~d~~i~~wd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~l~~~~-~dg~i~i 234 (375)
|+.+-++.-|..+|.+- ++.+..+..+ . -...+..|++.+ .++++ +|++++ .++...+
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g---------~--l~aDvEGLai~~----~~~g~gyLivSsQG~~s~~V 258 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGR---------H--LTRDIEGLTIYY----AADGKGYLMASSQGNSSYAI 258 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSS---------S--BCSCEEEEEEEE----CGGGCEEEEEEEGGGTEEEE
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCC---------c--cccCcceEEEEe----cCCCCEEEEEEcCCCCEEEE
Confidence 89999887777777542 2222222111 0 113577787743 11344 566666 6779999
Q ss_pred EeCC
Q 017194 235 INIE 238 (375)
Q Consensus 235 ~d~~ 238 (375)
||..
T Consensus 259 ydr~ 262 (355)
T 3amr_A 259 YDRQ 262 (355)
T ss_dssp EESS
T ss_pred EECC
Confidence 9997
No 289
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.53 E-value=2.7e-06 Score=77.62 Aligned_cols=183 Identities=10% Similarity=-0.006 Sum_probs=105.2
Q ss_pred CCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEc-CCCeEEEEECCCCCc-ccccccccCCCcceeEEEEcCC
Q 017194 37 DGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVS-SGKEVKSFDVHMPAS-WRPLESYNYNKEEINQIVCNPK 114 (375)
Q Consensus 37 d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~d~~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~ 114 (375)
.+.|+..++.+.+....+.. ...+..++|.+.+..|+.+. ..+.|+.+++..... ......+.........+++.+.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 35688888877665444433 34567899998776666554 457899999874100 0111111111234567888865
Q ss_pred CCeE-EEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecC-CeEEEeeCCCCCcceEEecCCCCC
Q 017194 115 SSFL-ACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLD-SKLVMWDFSKGRPNKIVNFGLPEN 192 (375)
Q Consensus 115 ~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~i~~wd~~~~~~~~~~~~~~~~~ 192 (375)
+..| ++-...+.|.++++........+. ........|++.|.+.+++++-... +.|..+++... ....+...
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~-~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~-~~~~l~~~---- 537 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFR-EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTE---- 537 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECC-CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC-CCCEESCS----
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEe-CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC-CeeEEEeC----
Confidence 4444 444466889999987554333333 2234568899999766455554333 67888877532 22222111
Q ss_pred CCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCC
Q 017194 193 NGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIES 239 (375)
Q Consensus 193 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 239 (375)
.-...+.|+++|. .++++++-...+.|..+++..
T Consensus 538 --------~l~~PnGlavd~~-----~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 538 --------NIQWPNGITLDLL-----SGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp --------SCSSCCCEEECTT-----TCCEEEEETTTTEEEEECSSS
T ss_pred --------CCCCccEEEEecc-----CCEEEEEecCCCeEEEEccCC
Confidence 1234578999873 344444445667899998864
No 290
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.51 E-value=2.7e-06 Score=77.61 Aligned_cols=208 Identities=12% Similarity=-0.023 Sum_probs=120.5
Q ss_pred ceeEEEEecCCCCEEEEeCCCCcEEEEeccc----CceeeEeeecCccEEEEEEeCCCCeE-EEEcCCCeEEEEECCCCC
Q 017194 17 TATCCIASRDRPGFVASSGEDGCICWFDLRS----KDVQLVTDVGNGPVTSLCFKSGNEDI-IYVSSGKEVKSFDVHMPA 91 (375)
Q Consensus 17 ~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~----~~~~~~~~~~~~~v~~l~~~~~~~~l-~~~~~d~~i~iwd~~~~~ 91 (375)
.+..++|.+.++.++++-...+.|..+++.. ......+...-.....|++.+.+..| ++-...+.|.++++....
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 4567899987444444445567899999875 22222222222335568887544444 444456789999987432
Q ss_pred cccccccccCCCcceeEEEEcCCCCeEEEEeC--CCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCC
Q 017194 92 SWRPLESYNYNKEEINQIVCNPKSSFLACADD--GGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDS 169 (375)
Q Consensus 92 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 169 (375)
....+.. .......+++.|.+.+|+.+.. .+.|.++++... ....+....-...+.|+++|++..++++-+..+
T Consensus 487 ~~~l~~~---~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~-~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~ 562 (699)
T 1n7d_A 487 RKTLFRE---QGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 562 (699)
T ss_dssp EEEECCC---SSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC-CCCEESCSSCSSCCCEEECTTTCCEEEEETTTT
T ss_pred eEEEEeC---CCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC-CeeEEEeCCCCCccEEEEeccCCEEEEEecCCC
Confidence 2211111 1234678899997666555543 267888877533 222232022345678999998775667767788
Q ss_pred eEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecc
Q 017194 170 KLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRS 246 (375)
Q Consensus 170 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 246 (375)
.|..+|+.. .....+... .. .......|++.. +.++++....+.|..++..+++....+
T Consensus 563 ~I~~~d~dG-~~~~~~~~~-------~~---~~~~P~glavd~-------~~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 563 SISSIDVNG-GNRKTILED-------EK---RLAHPFSLAVFE-------DKVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp EEEEECSSS-SCCEEECCC-------SS---SCSSCCCCEEET-------TEEEEECSTTTCEEEEETTTEEEEECC
T ss_pred eEEEEccCC-CceEEEEec-------CC---cCCCceEeEEEC-------CEEEEEeCCCCeEEEEEccCCCceEEe
Confidence 999999874 333333211 00 012234455543 455555566789999998877655544
No 291
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.48 E-value=3e-05 Score=71.74 Aligned_cols=113 Identities=12% Similarity=0.150 Sum_probs=74.0
Q ss_pred ceeEEEEc-CCCCeEEEEeC-CC----cEEEEeCcCc-eeee-eEecCcccceeEEEEeeCCCcEEEEeecC-----CeE
Q 017194 105 EINQIVCN-PKSSFLACADD-GG----DVKIIDIRQH-CLYK-SLRAGHSSICSSVQFIPWKPWEVISGGLD-----SKL 171 (375)
Q Consensus 105 ~v~~~~~~-~~~~~l~~~~~-dg----~i~iwd~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----~~i 171 (375)
.+...+|+ |||++|+.+.. +| .|+++|+.++ +.+. .+. .....++|+|+++. |+....+ ..|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~----~~~~~~~WspDg~~-l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS----GTNGEIVWGPDHTS-LFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE----EECSCCEECSSTTE-EEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc----CceeeEEEecCCCE-EEEEEECCCCCCCEE
Confidence 67789999 99998886543 23 4999999988 6432 122 12457899999984 4444443 368
Q ss_pred EEeeCCCCCcc--eEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEec---CCcEEEEeCCCc
Q 017194 172 VMWDFSKGRPN--KIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKG---DGVVDVINIESE 240 (375)
Q Consensus 172 ~~wd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~ 240 (375)
+.+++.+++.. ..+... .......+.++| ++++|+.... ...|.++|+.++
T Consensus 250 ~~~~lgt~~~~~~lv~~~~------------~~~~~~~~~~Sp------Dg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEH------------NPLFSAFMYKAA------DTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEETTSCGGGCEEEEECC------------CTTCEEEEEECT------TSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEECCCCchhcEEEEecC------------CCceEEEEEECC------CCCEEEEEecCCCCceEEEEECCCC
Confidence 88888776532 222211 123456788998 7998887663 346778888753
No 292
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.48 E-value=0.00066 Score=61.05 Aligned_cols=202 Identities=9% Similarity=-0.023 Sum_probs=118.5
Q ss_pred CceeEEEEecCCCCEEEEeCCCCcEEEEecccCce-eeEeeecCccEEEEEEeCCCCeEEEE-cCCCeEEEEECCCCCcc
Q 017194 16 ATATCCIASRDRPGFVASSGEDGCICWFDLRSKDV-QLVTDVGNGPVTSLCFKSGNEDIIYV-SSGKEVKSFDVHMPASW 93 (375)
Q Consensus 16 ~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~-~~~~~~~~~~v~~l~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~ 93 (375)
.....++|++.++.++++-...+.|..++++.... ...+...-.....+++.+.+..|+.+ ...+.|.+.++.....
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~- 118 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR- 118 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE-
Confidence 44678999987455555656678898888875532 22333223578899999865555544 5568999999875322
Q ss_pred cccccccCCCcceeEEEEcCCCCeEEEEeC--CCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeE
Q 017194 94 RPLESYNYNKEEINQIVCNPKSSFLACADD--GGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKL 171 (375)
Q Consensus 94 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i 171 (375)
..+.. ..-.....+++.|.+.+|+.... .+.|...++.......... ..-...+.|++.++++.++++-...+.|
T Consensus 119 ~~l~~--~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~-~~~~~P~Glald~~~~~LY~aD~~~~~I 195 (619)
T 3s94_A 119 KVLFW--QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN-SEIYWPNGLTLDYEEQKLYWADAKLNFI 195 (619)
T ss_dssp EEEEC--SSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-SSCSSEEEEEEETTTTEEEEEETTTCCE
T ss_pred EEEEe--CCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEe-CCCCCCcEEEEEccCCEEEEEeCCCCeE
Confidence 22211 12345778999997666666653 4577777765433322232 3345678999999877455665667789
Q ss_pred EEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcc
Q 017194 172 VMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESEL 241 (375)
Q Consensus 172 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 241 (375)
..+|+..... ..+... .......|++.+ +.++++-...+.|...|..+++
T Consensus 196 ~~~~~dG~~~-~~~~~~------------~~~~P~gi~~~~-------~~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 196 HKSNLDGTNR-QAVVKG------------SLPHPFALTLFE-------DILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp EEESSSCCEE-C---------------------CCCEEESS-------SEEEEECTTTCSEEEEESSSCC
T ss_pred EEecCCCCcc-EEEEeC------------CCCCceEEEEeC-------CEEEEecCCCCEEEEEECCCCc
Confidence 9999874332 222111 011224566643 3334443456788888877654
No 293
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.46 E-value=9.2e-05 Score=59.74 Aligned_cols=165 Identities=16% Similarity=0.151 Sum_probs=108.5
Q ss_pred ecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeE-eee----c--CccEEEEEE---eCCCCeEEEEc----
Q 017194 12 RGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLV-TDV----G--NGPVTSLCF---KSGNEDIIYVS---- 77 (375)
Q Consensus 12 ~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~-~~~----~--~~~v~~l~~---~~~~~~l~~~~---- 77 (375)
....---.+++|.+.++.++++.-..++|..|+...+..... +.. . ...+..|.| .|+++++++..
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~a 88 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKS 88 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTT
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccc
Confidence 333344557899987566666666889999999876543322 221 1 124578999 58877766533
Q ss_pred ---------CCCeEEEEECC---CCCcccccc--ccc-------C-CCcceeEEEEcCCCCeEEEEeCC-CcEEEEeCcC
Q 017194 78 ---------SGKEVKSFDVH---MPASWRPLE--SYN-------Y-NKEEINQIVCNPKSSFLACADDG-GDVKIIDIRQ 134 (375)
Q Consensus 78 ---------~d~~i~iwd~~---~~~~~~~~~--~~~-------~-~~~~v~~~~~~~~~~~l~~~~~d-g~i~iwd~~~ 134 (375)
.+..|..+|+. +++...... ... + .......++..++|+..++++.. +.|...+...
T Consensus 89 f~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 89 FNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG 168 (334)
T ss_dssp TCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS
T ss_pred ccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC
Confidence 25789999998 665432221 110 0 11358899999999999988888 8888888754
Q ss_pred ceeeeeEec-----CcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCC
Q 017194 135 HCLYKSLRA-----GHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178 (375)
Q Consensus 135 ~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~ 178 (375)
. .+..+.. ......+.|+++|++. +|++....|.+..+|+++
T Consensus 169 ~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~-~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 169 K-TVSTFAWESGNGGQRPGYSGITFDPHSN-KLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp C-CEEEEEECCCCSSSCCSCSEEEEETTTT-EEEEESSSSSEEEEECSS
T ss_pred C-EEeeeeecCCCcccccCcceEEEeCCCC-EEEEEcCCCeEEEEcCCC
Confidence 3 3332220 1122367999999998 566665599999999884
No 294
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.37 E-value=0.00092 Score=57.67 Aligned_cols=158 Identities=15% Similarity=0.163 Sum_probs=97.3
Q ss_pred EEEEEEeCC-CCeEEEEcC-CCeEEEEECCCCCcccccccccCCCcceeEEEE-------cCCCCeEEEEeCCC------
Q 017194 61 VTSLCFKSG-NEDIIYVSS-GKEVKSFDVHMPASWRPLESYNYNKEEINQIVC-------NPKSSFLACADDGG------ 125 (375)
Q Consensus 61 v~~l~~~~~-~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~~l~~~~~dg------ 125 (375)
...|+|.|. ...|+.+.. .+.|++.|++++........-.........++| +++++.|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 568899983 444555543 467889998865433222221112345889999 99999777776544
Q ss_pred -cEEEEeCcC-ceee-----eeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCC-------CCCc----------
Q 017194 126 -DVKIIDIRQ-HCLY-----KSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFS-------KGRP---------- 181 (375)
Q Consensus 126 -~i~iwd~~~-~~~~-----~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~-------~~~~---------- 181 (375)
.|.+++... +... ..+. . -.....++++|++..++++-..++.|..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~-~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIA-A-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEE-E-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred ceEEEEecCCCCceeecccceeec-c-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266665433 2221 2222 1 12446788999666577777788999999987 5543
Q ss_pred -ceE-EecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEE-ecCCcEEEEeCC
Q 017194 182 -NKI-VNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVA-KGDGVVDVINIE 238 (375)
Q Consensus 182 -~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~ 238 (375)
... +..+ .......|+++| +++.|+++ +....|+.++..
T Consensus 299 ~~~~l~~~~------------~~~~p~~ia~~p------~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 299 TFKQLFTIA------------DPSWEFQIFIHP------TGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp TEEEEEECS------------SSSCCEEEEECT------TSSEEEEEETTTTEEEEEEEE
T ss_pred ccceeEecC------------CCCCceEEEEcC------CCCEEEEEeCCCCEEEEEecC
Confidence 112 2222 124567899999 78865555 456788886654
No 295
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.32 E-value=0.00072 Score=54.95 Aligned_cols=186 Identities=11% Similarity=0.121 Sum_probs=95.0
Q ss_pred CCEEEEeC-CC-----CcEEEEecccCceeeE--eeecCccEEEEEEeCCCCeEEEEcCC-----CeEEEEECCCCCc--
Q 017194 28 PGFVASSG-ED-----GCICWFDLRSKDVQLV--TDVGNGPVTSLCFKSGNEDIIYVSSG-----KEVKSFDVHMPAS-- 92 (375)
Q Consensus 28 ~~~l~s~~-~d-----~~i~iw~~~~~~~~~~--~~~~~~~v~~l~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~-- 92 (375)
+.+++.|+ .+ ..+.+||+.+.+-... +....... +++ ..++..++.|+.+ ..+.+||+.+.+.
T Consensus 15 ~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~-~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 15 EVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYV-ASV-SLHDRIYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp EEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSC-EEE-EETTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred CEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccc-cEE-EECCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 46677777 33 3688899877653221 11111111 222 2356667777654 4689999887541
Q ss_pred ccccccccCCCcceeEEEEcCCCCeEEEEeCC-----CcEEEEeCcCceee--eeEecCcccceeEEEEeeCCCcEEEEe
Q 017194 93 WRPLESYNYNKEEINQIVCNPKSSFLACADDG-----GDVKIIDIRQHCLY--KSLRAGHSSICSSVQFIPWKPWEVISG 165 (375)
Q Consensus 93 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~ 165 (375)
+..+.........-..+.+ +++.++.|+.+ ..+.+||+.+.+-. ..+. ..... .+++. -++. +++.|
T Consensus 93 W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~-~~~~~-~~~~-iyv~G 166 (301)
T 2vpj_A 93 WYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQ-TAREG-AGLVV-ASGV-IYCLG 166 (301)
T ss_dssp CEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECS-SCCBS-CEEEE-ETTE-EEEEC
T ss_pred eEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCC-CCccc-ceEEE-ECCE-EEEEC
Confidence 3333333221112222222 56667776643 35889998766432 2222 11111 12222 2454 77777
Q ss_pred ecC-----CeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecC-----CcEEEE
Q 017194 166 GLD-----SKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGD-----GVVDVI 235 (375)
Q Consensus 166 ~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~ 235 (375)
+.+ ..+..||+.+.+-...-... .+..-.++... ++++++.|+.+ ..+.+|
T Consensus 167 G~~~~~~~~~~~~~d~~~~~W~~~~~~p------------~~r~~~~~~~~-------~~~i~v~GG~~~~~~~~~v~~y 227 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPHTGHWTNVTPMA------------TKRSGAGVALL-------NDHIYVVGGFDGTAHLSSVEAY 227 (301)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEEECCCS------------SCCBSCEEEEE-------TTEEEEECCBCSSSBCCCEEEE
T ss_pred CCCCCcccceEEEEeCCCCcEEeCCCCC------------cccccceEEEE-------CCEEEEEeCCCCCcccceEEEE
Confidence 754 45888998876433221111 01111222222 47777777754 468888
Q ss_pred eCCCc
Q 017194 236 NIESE 240 (375)
Q Consensus 236 d~~~~ 240 (375)
|+.+.
T Consensus 228 d~~~~ 232 (301)
T 2vpj_A 228 NIRTD 232 (301)
T ss_dssp ETTTT
T ss_pred eCCCC
Confidence 88763
No 296
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.28 E-value=0.00033 Score=57.08 Aligned_cols=191 Identities=12% Similarity=0.183 Sum_probs=115.5
Q ss_pred CCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCC----CCe--E-EEEe-C--CCcEEEEeCc--Ccee
Q 017194 70 NEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPK----SSF--L-ACAD-D--GGDVKIIDIR--QHCL 137 (375)
Q Consensus 70 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~--l-~~~~-~--dg~i~iwd~~--~~~~ 137 (375)
...++.....+-+.+||+ +++.++.+. .+.++.+..-|+ ++. + ++.. . +++|.+|++. +++
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~-----~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~- 112 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYN-----TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT- 112 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEEC-----CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEcc-----CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-
Confidence 345666666789999999 565555443 245566555552 222 3 3333 3 5789999773 333
Q ss_pred eeeEec-----Ccc-cceeEEEE--eeC-CCcEEEEeecCCeEEEeeCC-------CCCcceEEecCCCCCCCCCCcccC
Q 017194 138 YKSLRA-----GHS-SICSSVQF--IPW-KPWEVISGGLDSKLVMWDFS-------KGRPNKIVNFGLPENNGNAGQCYN 201 (375)
Q Consensus 138 ~~~~~~-----~~~-~~v~~~~~--~~~-~~~~l~~~~~d~~i~~wd~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 201 (375)
+..+.. +.. ..+..+++ +|. +..++++...+|.+..|++. +.+.++++..+
T Consensus 113 l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg------------- 179 (355)
T 3amr_A 113 LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN------------- 179 (355)
T ss_dssp EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-------------
T ss_pred eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-------------
Confidence 443320 011 56677888 664 44357778888999999983 33556677654
Q ss_pred CCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeE
Q 017194 202 PAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLH 281 (375)
Q Consensus 202 ~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~ 281 (375)
..+..+.+.+ ....|+++-++.-|..|+.+... ....+
T Consensus 180 -sq~EgcvvDd------~~g~Lyv~eEd~GIw~~da~p~~-----------------------------------~~~~~ 217 (355)
T 3amr_A 180 -SQTEGMAADD------EYGRLYIAEEDEAIWKFSAEPDG-----------------------------------GSNGT 217 (355)
T ss_dssp -SCEEEEEEET------TTTEEEEEETTTEEEEEECSTTS-----------------------------------CSCCE
T ss_pred -CCcceEEEcC------CCCeEEEecccceEEEEeCCcCC-----------------------------------CCCce
Confidence 5778888877 68899999998777777755210 00112
Q ss_pred eeeeec-CC-CccEEEEEEeecCCCCc-EEEEec-CCCeEEEEeCC
Q 017194 282 LDYSVG-GH-TAAASCVAFSMFGERGK-YLISGG-NDKLVKVWDCS 323 (375)
Q Consensus 282 ~~~~~~-~~-~~~v~~~~~s~~~~~~~-~l~s~~-~dg~i~iwd~~ 323 (375)
.+..+. ++ ...+..|++-+. ++++ ||++++ .+++..+||..
T Consensus 218 ~v~~~~~g~l~aDvEGLai~~~-~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 218 VIDRADGRHLTRDIEGLTIYYA-ADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEBSSSSBCSCEEEEEEEEC-GGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEEEecCCccccCcceEEEEec-CCCCEEEEEEcCCCCEEEEEECC
Confidence 222221 22 346788887421 4444 555554 67899999997
No 297
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.20 E-value=0.0014 Score=52.93 Aligned_cols=173 Identities=14% Similarity=0.184 Sum_probs=107.2
Q ss_pred ceeEEEEcCCCCeEEEEe-CCCcEEEEeCcCceeeee-EecC----c--ccceeEEEE---eeCCCcEEEEee-------
Q 017194 105 EINQIVCNPKSSFLACAD-DGGDVKIIDIRQHCLYKS-LRAG----H--SSICSSVQF---IPWKPWEVISGG------- 166 (375)
Q Consensus 105 ~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~-~~~~----~--~~~v~~~~~---~~~~~~~l~~~~------- 166 (375)
--.+++|.+....++.++ ..++|..||...+..... +. + . ...+..|.| .|++. ++++..
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~-~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~~~~~af~~ 91 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVID-GASSNGDGEQQMSGLSLLTHDNSKR-LFAVMKNAKSFNF 91 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCT-TTCCSSCCSEEEEEEEESSSSSCCE-EEEEEEETTTTCT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecC-CccccCCCcceeeEEEEeccCCCCc-EEEEEcccccccc
Confidence 445788988666666666 789999999975543322 22 1 1 124579999 58865 555433
Q ss_pred ------cCCeEEEeeCC---CCCcceEEecCCCCCC--CCCCcccCCCceeEEeecCCccccCCCCEEEEEecC-CcEEE
Q 017194 167 ------LDSKLVMWDFS---KGRPNKIVNFGLPENN--GNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGD-GVVDV 234 (375)
Q Consensus 167 ------~d~~i~~wd~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~d-g~i~i 234 (375)
.+..|..||+. +++.+....+...... ..... .......+++.+ +|+..++++.. +.|..
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~--~~~~~nDvavD~------~GnaYVt~s~~~~~I~r 163 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGK--RPFGVVQSAQDR------DGNSYVAFALGMPAIAR 163 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSS--CCEEEEEEEECT------TSCEEEEEEESSCEEEE
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccc--cccCCceeEECC------CCCEEEeCCCCCCeEEE
Confidence 26789999999 8888877764200000 00000 012477888887 79998888877 77766
Q ss_pred EeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCC
Q 017194 235 INIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGND 314 (375)
Q Consensus 235 ~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~d 314 (375)
++.... .+.. +-............+.|++. |+|+.|++...+
T Consensus 164 V~pdG~------------------------~~~~-----------~~~~~~~~~~~~G~nGIv~~---pdg~~Liv~~~~ 205 (334)
T 2p9w_A 164 VSADGK------------------------TVST-----------FAWESGNGGQRPGYSGITFD---PHSNKLIAFGGP 205 (334)
T ss_dssp ECTTSC------------------------CEEE-----------EEECCCCSSSCCSCSEEEEE---TTTTEEEEESSS
T ss_pred EeCCCC------------------------EEee-----------eeecCCCcccccCcceEEEe---CCCCEEEEEcCC
Confidence 665532 1100 00000011122346788999 999888887779
Q ss_pred CeEEEEeCCCc
Q 017194 315 KLVKVWDCSRF 325 (375)
Q Consensus 315 g~i~iwd~~~~ 325 (375)
|.|..+|+...
T Consensus 206 g~L~~fD~~~p 216 (334)
T 2p9w_A 206 RALTAFDVSKP 216 (334)
T ss_dssp SSEEEEECSSS
T ss_pred CeEEEEcCCCC
Confidence 99999998853
No 298
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.20 E-value=0.0017 Score=53.48 Aligned_cols=190 Identities=9% Similarity=-0.007 Sum_probs=101.7
Q ss_pred CCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEee---ecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCC
Q 017194 15 KATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTD---VGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPA 91 (375)
Q Consensus 15 ~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~---~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~ 91 (375)
...+.++.+.+ +..++. +.++.|.. ..+.|+.-..+. .+...+..+.+.+++..++++. ++.|.. ..+.++
T Consensus 79 ~~~~~~i~~~~--~~~~~~-g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~-S~DgG~ 152 (327)
T 2xbg_A 79 DYRFNSVSFQG--NEGWIV-GEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYR-TKDSGK 152 (327)
T ss_dssp CCEEEEEEEET--TEEEEE-EETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEE-ESSTTS
T ss_pred CccEEEEEecC--CeEEEE-ECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEE-EcCCCC
Confidence 34688898875 344444 45564433 333343322222 1234577888877776665554 554422 223344
Q ss_pred cccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEE-EeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCe
Q 017194 92 SWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKI-IDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSK 170 (375)
Q Consensus 92 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i-wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 170 (375)
.+..+.. .....+..+.+.+++.+++++. +|.+.. .|- .++.-..+.......+..+.+.+++. ++.++.+|.
T Consensus 153 tW~~~~~--~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g~--~~~~~~~G~ 226 (327)
T 2xbg_A 153 NWQALVQ--EAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEP-GQTAWEPHNRTTSRRLHNMGFTPDGR--LWMIVNGGK 226 (327)
T ss_dssp SEEEEEC--SCCCCEEEEEECTTSCEEEEET-TSSEEEEECT-TCSSCEEEECCSSSCEEEEEECTTSC--EEEEETTTE
T ss_pred CCEEeec--CCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCC-CCCceeECCCCCCCccceeEECCCCC--EEEEeCCce
Confidence 4544432 2345788999999988777664 455444 332 12222222213456788899988875 455666788
Q ss_pred EEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcE
Q 017194 171 LVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVV 232 (375)
Q Consensus 171 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i 232 (375)
+++.+...++.-..+..+ + ......+..+.+.+ ++.+++++. +|.|
T Consensus 227 ~~~s~~D~G~tW~~~~~~--~-------~~~~~~~~~v~~~~------~~~~~~~g~-~g~i 272 (327)
T 2xbg_A 227 IAFSDPDNSENWGELLSP--L-------RRNSVGFLDLAYRT------PNEVWLAGG-AGAL 272 (327)
T ss_dssp EEEEETTEEEEECCCBCT--T-------SSCCSCEEEEEESS------SSCEEEEES-TTCE
T ss_pred EEEecCCCCCeeEeccCC--c-------ccCCcceEEEEecC------CCEEEEEeC-CCeE
Confidence 877643323222111110 0 00123477888876 566666554 5655
No 299
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.16 E-value=0.0018 Score=52.65 Aligned_cols=185 Identities=14% Similarity=0.180 Sum_probs=92.5
Q ss_pred CCEEEEeCCC----CcEEEEecccCceeeE--eeecCccEEEEEEeCCCCeEEEEcCC-----CeEEEEECCCCCccccc
Q 017194 28 PGFVASSGED----GCICWFDLRSKDVQLV--TDVGNGPVTSLCFKSGNEDIIYVSSG-----KEVKSFDVHMPASWRPL 96 (375)
Q Consensus 28 ~~~l~s~~~d----~~i~iw~~~~~~~~~~--~~~~~~~v~~l~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~ 96 (375)
+.+++.|+.+ ..+..||+.+.+-... +......- +++. -++..++.|+.+ ..+.+||..+.+ +..+
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~-W~~~ 92 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRA-GMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQ-WTSV 92 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTE-EEEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccc-eEEE-ECCEEEEEeCcCCCccccceEEECCCCCc-eeeC
Confidence 3566666643 3588888877653221 11111111 2222 256666777654 368899988653 4444
Q ss_pred ccccCCCcceeEEEEcCCCCeEEEEeCCC-----cEEEEeCcCceee--eeEecCcccceeEEEEeeCCCcEEEEeecC-
Q 017194 97 ESYNYNKEEINQIVCNPKSSFLACADDGG-----DVKIIDIRQHCLY--KSLRAGHSSICSSVQFIPWKPWEVISGGLD- 168 (375)
Q Consensus 97 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d- 168 (375)
.........-..+.+ +++.++.|+.++ .+.+||+.+.+-. ..+. ..... .+++. -++. +++.|+.+
T Consensus 93 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~-~~~~~-~~~~-iyv~GG~~~ 166 (302)
T 2xn4_A 93 ANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMN-TRRSS-VGVGV-VGGL-LYAVGGYDV 166 (302)
T ss_dssp CCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCS-SCCBS-CEEEE-ETTE-EEEECCEET
T ss_pred CCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCC-CcccC-ceEEE-ECCE-EEEEeCCCC
Confidence 333221111222222 566777776543 5788888765432 2222 11111 12222 2444 67776643
Q ss_pred ------CeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecC-----CcEEEEeC
Q 017194 169 ------SKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGD-----GVVDVINI 237 (375)
Q Consensus 169 ------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~ 237 (375)
..+.+||+.+.+-...-... .+..-.+++.. ++++++.|+.+ ..+.+||+
T Consensus 167 ~~~~~~~~~~~yd~~~~~W~~~~~~p------------~~r~~~~~~~~-------~~~iyv~GG~~~~~~~~~~~~yd~ 227 (302)
T 2xn4_A 167 ASRQCLSTVECYNATTNEWTYIAEMS------------TRRSGAGVGVL-------NNLLYAVGGHDGPLVRKSVEVYDP 227 (302)
T ss_dssp TTTEECCCEEEEETTTTEEEEECCCS------------SCCBSCEEEEE-------TTEEEEECCBSSSSBCCCEEEEET
T ss_pred CCCccccEEEEEeCCCCcEEECCCCc------------cccccccEEEE-------CCEEEEECCCCCCcccceEEEEeC
Confidence 35888998766433221111 01111223332 47778887754 36788888
Q ss_pred CCc
Q 017194 238 ESE 240 (375)
Q Consensus 238 ~~~ 240 (375)
.+.
T Consensus 228 ~~~ 230 (302)
T 2xn4_A 228 TTN 230 (302)
T ss_dssp TTT
T ss_pred CCC
Confidence 753
No 300
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.15 E-value=0.0039 Score=56.13 Aligned_cols=185 Identities=10% Similarity=0.063 Sum_probs=114.7
Q ss_pred EEEEeCCCCcEEEEecccCceeeEeee-cCccEEEEEEeCCCCeEEEE-cCCCeEEEEECCCCCcccccccccCCCccee
Q 017194 30 FVASSGEDGCICWFDLRSKDVQLVTDV-GNGPVTSLCFKSGNEDIIYV-SSGKEVKSFDVHMPASWRPLESYNYNKEEIN 107 (375)
Q Consensus 30 ~l~s~~~d~~i~iw~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~ 107 (375)
+|+.+ ....|+..++++......+.. .-..+..|+|.+.+..|+.+ ..++.|..+++..... ..+... ......
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~-~~v~~~--g~~~P~ 83 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL-EHVVEF--GLDYPE 83 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECS--SCSCCC
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc-EEEEeC--CCCCcc
Confidence 44433 345799999987654333332 23467899999876665544 4568999999874322 222111 123567
Q ss_pred EEEEcCCCCeEEEE-eCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEe-ecCCeEEEeeCCCCCcceEE
Q 017194 108 QIVCNPKSSFLACA-DDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISG-GLDSKLVMWDFSKGRPNKIV 185 (375)
Q Consensus 108 ~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~ 185 (375)
.+++.+.+..|+.+ ...+.|.+.++........+. ..-.....|++.|....++++- +..+.|...++.... ...+
T Consensus 84 GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~-~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l 161 (628)
T 4a0p_A 84 GMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVW-KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTL 161 (628)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEEC-SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEE
T ss_pred eEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEe-CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEE
Confidence 88998765555444 456789999986543322232 3345678999999665445543 235788888876443 3333
Q ss_pred ecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe-cCCcEEEEeCCC
Q 017194 186 NFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK-GDGVVDVINIES 239 (375)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~ 239 (375)
... -.....|++++ +++.|+.+. ..+.|..+|+..
T Consensus 162 ~~~-------------~~~P~GlalD~------~~~~LY~aD~~~~~I~~~d~dG 197 (628)
T 4a0p_A 162 VPN-------------VGRANGLTIDY------AKRRLYWTDLDTNLIESSNMLG 197 (628)
T ss_dssp ECS-------------CSSEEEEEEET------TTTEEEEEETTTTEEEEEETTS
T ss_pred ECC-------------CCCcceEEEcc------ccCEEEEEECCCCEEEEEcCCC
Confidence 211 35678999988 566666554 567888888875
No 301
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.12 E-value=0.0023 Score=52.12 Aligned_cols=184 Identities=11% Similarity=0.074 Sum_probs=93.2
Q ss_pred CEEEEeCC--CCcEEEEecccCceeeE--eeecCccEEEEEEeCCCCeEEEEcCC----CeEEEEECCCCCccccccccc
Q 017194 29 GFVASSGE--DGCICWFDLRSKDVQLV--TDVGNGPVTSLCFKSGNEDIIYVSSG----KEVKSFDVHMPASWRPLESYN 100 (375)
Q Consensus 29 ~~l~s~~~--d~~i~iw~~~~~~~~~~--~~~~~~~v~~l~~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~ 100 (375)
.+++.|+. ...+.+||..+++-... +.........+. -++..++.|+.+ ..+.+||+.+.+ +..+....
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~-W~~~~~~p 89 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDS-WYSKLGPP 89 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTE-EEEEECCS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCe-EEECCCCC
Confidence 45566654 35688999887653221 211111222222 356666777654 678899988653 33333332
Q ss_pred CCCcceeEEEEcCCCCeEEEEeCC------CcEEEEeCcCceee--eeEecCcccceeEEEEeeCCCcEEEEeec-----
Q 017194 101 YNKEEINQIVCNPKSSFLACADDG------GDVKIIDIRQHCLY--KSLRAGHSSICSSVQFIPWKPWEVISGGL----- 167 (375)
Q Consensus 101 ~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----- 167 (375)
.....-..+.+ +++.++.|+.+ ..+.+||+.+.+-. ..+. ..... .+++. -++. +++.|+.
T Consensus 90 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~-~~~~~-~~~~-iyv~GG~~~~~~ 163 (306)
T 3ii7_A 90 TPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSML-TQRCS-HGMVE-ANGL-IYVCGGSLGNNV 163 (306)
T ss_dssp SCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCS-SCCBS-CEEEE-ETTE-EEEECCEESCTT
T ss_pred ccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCc-CCcce-eEEEE-ECCE-EEEECCCCCCCC
Confidence 21111222222 56677777654 45889998876432 2222 11111 12222 2444 6677664
Q ss_pred ----CCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecC-----CcEEEEeCC
Q 017194 168 ----DSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGD-----GVVDVINIE 238 (375)
Q Consensus 168 ----d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~ 238 (375)
-..+.+||+.+.+-...-... .+..-.++... ++++++.|+.+ ..+.+||+.
T Consensus 164 ~~~~~~~~~~yd~~~~~W~~~~~~p------------~~r~~~~~~~~-------~~~i~v~GG~~~~~~~~~~~~yd~~ 224 (306)
T 3ii7_A 164 SGRVLNSCEVYDPATETWTELCPMI------------EARKNHGLVFV-------KDKIFAVGGQNGLGGLDNVEYYDIK 224 (306)
T ss_dssp TCEECCCEEEEETTTTEEEEECCCS------------SCCBSCEEEEE-------TTEEEEECCEETTEEBCCEEEEETT
T ss_pred cccccceEEEeCCCCCeEEECCCcc------------chhhcceEEEE-------CCEEEEEeCCCCCCCCceEEEeeCC
Confidence 345889998876433221111 01111223332 46777777653 357888887
Q ss_pred Cc
Q 017194 239 SE 240 (375)
Q Consensus 239 ~~ 240 (375)
+.
T Consensus 225 ~~ 226 (306)
T 3ii7_A 225 LN 226 (306)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 302
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.09 E-value=0.0053 Score=55.31 Aligned_cols=200 Identities=6% Similarity=-0.049 Sum_probs=127.4
Q ss_pred CceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEE-EcCCCeEEEEECCCCCccc
Q 017194 16 ATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIY-VSSGKEVKSFDVHMPASWR 94 (375)
Q Consensus 16 ~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~-~~~d~~i~iwd~~~~~~~~ 94 (375)
..+..++|.+.++.++++-..++.|..+++........+.........|++.+.+..|+. -...+.|.+.++..... .
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-~ 115 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR-Q 115 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC-E
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE-E
Confidence 356789999985666667677889999998755443334333345778999876555544 44567899999874322 2
Q ss_pred ccccccCCCcceeEEEEcCCCCeEEEEeC--CCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEE
Q 017194 95 PLESYNYNKEEINQIVCNPKSSFLACADD--GGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLV 172 (375)
Q Consensus 95 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~ 172 (375)
.+.. ..-.....+++.|....|+.... .+.|...++.... ...+. ..-.....|++.++++.++++-...+.|.
T Consensus 116 ~l~~--~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~-~~~~~P~GlalD~~~~~LY~aD~~~~~I~ 191 (628)
T 4a0p_A 116 VLVW--KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLV-PNVGRANGLTIDYAKRRLYWTDLDTNLIE 191 (628)
T ss_dssp EEEC--SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEe--CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEE-CCCCCcceEEEccccCEEEEEECCCCEEE
Confidence 2211 12345689999996666666652 5678888876443 33333 34456789999998775566666778999
Q ss_pred EeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcc
Q 017194 173 MWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESEL 241 (375)
Q Consensus 173 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 241 (375)
.+|+..... ..+... ......+++.. +.++++-...+.|...|..++.
T Consensus 192 ~~d~dG~~~-~v~~~~-------------l~~P~glav~~-------~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 192 SSNMLGLNR-EVIADD-------------LPHPFGLTQYQ-------DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EEETTSCSC-EEEEEC-------------CSCEEEEEEET-------TEEEEEETTTTEEEEEETTTCC
T ss_pred EEcCCCCce-EEeecc-------------CCCceEEEEEC-------CEEEEecCCCCEEEEEECCCCC
Confidence 999875443 333211 23445777753 4444444456788888866543
No 303
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.07 E-value=0.0059 Score=54.94 Aligned_cols=164 Identities=5% Similarity=-0.087 Sum_probs=101.4
Q ss_pred CceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcC--CCeEEEEECCCCCcc
Q 017194 16 ATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSS--GKEVKSFDVHMPASW 93 (375)
Q Consensus 16 ~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~ 93 (375)
.....+++.+.+++++++-...+.|.+.+++.......+...-.....|++.|.+..|+.+.. .+.|...++.... .
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~-~ 162 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-R 162 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS-C
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc-e
Confidence 457789999874666667677889999998754433333234456778999997666655543 3567777766322 2
Q ss_pred cccccccCCCcceeEEEEcCCCCeEEEEe-CCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEE
Q 017194 94 RPLESYNYNKEEINQIVCNPKSSFLACAD-DGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLV 172 (375)
Q Consensus 94 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~ 172 (375)
..+.. ..-.....+++++++..|+.+. ..+.|...|+.......... +......+|++..+ .++++-...+.|.
T Consensus 163 ~~l~~--~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~-~~~~~P~gi~~~~~--~ly~td~~~~~V~ 237 (619)
T 3s94_A 163 FIIIN--SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK-GSLPHPFALTLFED--ILYWTDWSTHSIL 237 (619)
T ss_dssp EEEEC--SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC----------CCCEEESSS--EEEEECTTTCSEE
T ss_pred EEEEe--CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEe-CCCCCceEEEEeCC--EEEEecCCCCEEE
Confidence 22211 1134578899999776666654 56789999986543322222 22233456777655 3667766788899
Q ss_pred EeeCCCCCcceEE
Q 017194 173 MWDFSKGRPNKIV 185 (375)
Q Consensus 173 ~wd~~~~~~~~~~ 185 (375)
..|..+++....+
T Consensus 238 ~~d~~tg~~~~~i 250 (619)
T 3s94_A 238 ACNKYTGEGLREI 250 (619)
T ss_dssp EEESSSCCCCEEC
T ss_pred EEECCCCcccEEE
Confidence 9998877655443
No 304
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.00 E-value=0.004 Score=50.69 Aligned_cols=185 Identities=11% Similarity=0.101 Sum_probs=93.2
Q ss_pred CCEEEEeCCC----CcEEEEecccCceeeE--eeecCccEEEEEEeCCCCeEEEEcC----C-----CeEEEEECCCCCc
Q 017194 28 PGFVASSGED----GCICWFDLRSKDVQLV--TDVGNGPVTSLCFKSGNEDIIYVSS----G-----KEVKSFDVHMPAS 92 (375)
Q Consensus 28 ~~~l~s~~~d----~~i~iw~~~~~~~~~~--~~~~~~~v~~l~~~~~~~~l~~~~~----d-----~~i~iwd~~~~~~ 92 (375)
+.+++.|+.+ ..+.+||..+.+-... +......- +++. .++..++.|+. + ..+.+||+.+.+
T Consensus 25 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~- 101 (308)
T 1zgk_A 25 RLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ- 101 (308)
T ss_dssp CCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTE-
T ss_pred CEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCe-
Confidence 5677777732 3688999876653221 11111111 2222 25666666665 2 468899988653
Q ss_pred ccccccccCCCcceeEEEEcCCCCeEEEEeCC-----CcEEEEeCcCcee--eeeEecCcccceeEEEEeeCCCcEEEEe
Q 017194 93 WRPLESYNYNKEEINQIVCNPKSSFLACADDG-----GDVKIIDIRQHCL--YKSLRAGHSSICSSVQFIPWKPWEVISG 165 (375)
Q Consensus 93 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 165 (375)
+..+.........-..+.+ +++.++.|+.+ ..+.+||+.+.+- +..+. ...... +++.. ++. +++.|
T Consensus 102 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~-~~~~~-~~~-iyv~G 175 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPML-TRRIGV-GVAVL-NRL-LYAVG 175 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCS-SCCBSC-EEEEE-TTE-EEEEC
T ss_pred EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCC-ccccce-EEEEE-CCE-EEEEe
Confidence 3333333221122222222 56666666533 4688999876542 22222 111111 22222 444 77777
Q ss_pred ecC-----CeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecC-----CcEEEE
Q 017194 166 GLD-----SKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGD-----GVVDVI 235 (375)
Q Consensus 166 ~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~ 235 (375)
+.+ ..+.+||+.+.+-...-... .+..-.++... ++++++.|+.+ ..+.+|
T Consensus 176 G~~~~~~~~~~~~yd~~~~~W~~~~~~p------------~~r~~~~~~~~-------~~~iyv~GG~~~~~~~~~v~~y 236 (308)
T 1zgk_A 176 GFDGTNRLNSAECYYPERNEWRMITAMN------------TIRSGAGVCVL-------HNCIYAAGGYDGQDQLNSVERY 236 (308)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEECCCCS------------SCCBSCEEEEE-------TTEEEEECCBCSSSBCCCEEEE
T ss_pred CCCCCCcCceEEEEeCCCCeEeeCCCCC------------CccccceEEEE-------CCEEEEEeCCCCCCccceEEEE
Confidence 754 45888998765432211111 01111222222 47777777654 468888
Q ss_pred eCCCc
Q 017194 236 NIESE 240 (375)
Q Consensus 236 d~~~~ 240 (375)
|+.+.
T Consensus 237 d~~~~ 241 (308)
T 1zgk_A 237 DVETE 241 (308)
T ss_dssp ETTTT
T ss_pred eCCCC
Confidence 88753
No 305
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.99 E-value=0.0049 Score=51.22 Aligned_cols=144 Identities=12% Similarity=0.090 Sum_probs=79.9
Q ss_pred CCceeEEEEecCCCCEEEEeCCCCcEEEEecccCce--eeEee---ecCccEEEEEEeCC---CCeEEEEcC-C-----C
Q 017194 15 KATATCCIASRDRPGFVASSGEDGCICWFDLRSKDV--QLVTD---VGNGPVTSLCFKSG---NEDIIYVSS-G-----K 80 (375)
Q Consensus 15 ~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~--~~~~~---~~~~~v~~l~~~~~---~~~l~~~~~-d-----~ 80 (375)
-..-..++|.|+ ++++++ ..+|.|.+++ .++. +..+. ........|+|+|+ +..|..+.. . +
T Consensus 30 l~~P~~ia~~pd-G~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 30 LEVPWALAFLPD-GGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp CSCEEEEEECTT-SCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCCceEEEEcCC-CeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 345678999999 776555 4568999998 3432 11111 12456889999998 445544433 2 6
Q ss_pred eEEEEECCCCCc--c-ccccccc---CCCcceeEEEEcCCCCeEEEEeC-------------CCcEEEEeCcCc------
Q 017194 81 EVKSFDVHMPAS--W-RPLESYN---YNKEEINQIVCNPKSSFLACADD-------------GGDVKIIDIRQH------ 135 (375)
Q Consensus 81 ~i~iwd~~~~~~--~-~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~------ 135 (375)
.|..++...+.. . ..+..+. ........++|.|+|.+.++.+. .|.|.-++.+..
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~np 185 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNP 185 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCc
Confidence 788888764311 1 1111122 11123468999999966555332 245666665430
Q ss_pred ------eeeeeEecCcccceeEEEEee-CCCcEEEE
Q 017194 136 ------CLYKSLRAGHSSICSSVQFIP-WKPWEVIS 164 (375)
Q Consensus 136 ------~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~ 164 (375)
.....+..++. ....++|+| ++. ++++
T Consensus 186 f~~~~~~~~~i~a~G~r-np~g~a~d~~~g~-l~v~ 219 (352)
T 2ism_A 186 FLGRRGARPEVYSLGHR-NPQGLAWHPKTGE-LFSS 219 (352)
T ss_dssp TTTCTTSCTTEEEECCS-EECCCEECTTTCC-EEEE
T ss_pred ccCCCCCCccEEEEcCC-CcccEEEECCCCC-EEEE
Confidence 11122221343 357889999 554 4444
No 306
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.96 E-value=0.0054 Score=50.97 Aligned_cols=103 Identities=10% Similarity=0.119 Sum_probs=61.6
Q ss_pred ccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCccccccc---ccCCCcceeEEEEcCC---CCeEEEEeC-C-----Cc
Q 017194 59 GPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLES---YNYNKEEINQIVCNPK---SSFLACADD-G-----GD 126 (375)
Q Consensus 59 ~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~v~~~~~~~~---~~~l~~~~~-d-----g~ 126 (375)
.....++|.|+|+.++ +..++.|++++ +++ ...+.. ..........++++|+ +..|+++.. . ..
T Consensus 31 ~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~-~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 31 EVPWALAFLPDGGMLI-AERPGRIRLFR--EGR-LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp SCEEEEEECTTSCEEE-EETTTEEEEEE--TTE-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCceEEEEcCCCeEEE-EeCCCeEEEEE--CCC-ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 4567999999998554 45669999998 332 222211 1112456789999998 556555543 2 56
Q ss_pred EEEEeCcCce-----e-eeeEe--cCcccceeEEEEeeCCCcEEEEee
Q 017194 127 VKIIDIRQHC-----L-YKSLR--AGHSSICSSVQFIPWKPWEVISGG 166 (375)
Q Consensus 127 i~iwd~~~~~-----~-~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~ 166 (375)
|..++...++ . +..+. .........++|.|+|. ++++.+
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G 153 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTG 153 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEEC
Confidence 8888876431 1 12232 01112346899999996 566543
No 307
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.96 E-value=0.0048 Score=50.06 Aligned_cols=104 Identities=12% Similarity=0.135 Sum_probs=52.4
Q ss_pred CeEEEEcCC----CeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCC-----CcEEEEeCcCcee--ee
Q 017194 71 EDIIYVSSG----KEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDG-----GDVKIIDIRQHCL--YK 139 (375)
Q Consensus 71 ~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~--~~ 139 (375)
..++.|+.+ ..+..||+.+.+ +..+.........- +++. -++..++.|+.+ ..+.+||..+.+- +.
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEER-WHQVAELPSRRCRA-GMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTE-EEEECCCSSCCBSC-EEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCc-EeEcccCCcccccc-eEEE-ECCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 344455432 467888887653 44333332211111 1222 256667777644 3588999876642 22
Q ss_pred eEecCcccceeEEEEeeCCCcEEEEeecCC-----eEEEeeCCCCCc
Q 017194 140 SLRAGHSSICSSVQFIPWKPWEVISGGLDS-----KLVMWDFSKGRP 181 (375)
Q Consensus 140 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~ 181 (375)
.+. ...... +++. -++. +++.|+.++ .+.+||+.+.+-
T Consensus 94 ~~p-~~r~~~-~~~~-~~~~-iyv~GG~~~~~~~~~~~~~d~~~~~W 136 (302)
T 2xn4_A 94 NMR-DRRSTL-GAAV-LNGL-LYAVGGFDGSTGLSSVEAYNIKSNEW 136 (302)
T ss_dssp CCS-SCCBSC-EEEE-ETTE-EEEEEEECSSCEEEEEEEEETTTTEE
T ss_pred CCC-ccccce-EEEE-ECCE-EEEEcCCCCCccCceEEEEeCCCCeE
Confidence 222 111111 2222 2444 677777553 577888876543
No 308
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.95 E-value=0.0049 Score=49.93 Aligned_cols=145 Identities=10% Similarity=0.138 Sum_probs=73.4
Q ss_pred CCeEEEEc-CC-----CeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCC-----CcEEEEeCcCce--
Q 017194 70 NEDIIYVS-SG-----KEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDG-----GDVKIIDIRQHC-- 136 (375)
Q Consensus 70 ~~~l~~~~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~-- 136 (375)
+..++.|+ .+ ..+.+||+.+.+ +..+............+ ..++..++.|+.+ ..+.+||+.+.+
T Consensus 15 ~~i~~~GG~~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~--~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 15 EVLLVVGGFGSQQSPIDVVEKYDPKTQE-WSFLPSITRKRRYVASV--SLHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp EEEEEECCEETTTEECCCEEEEETTTTE-EEECCCCSSCCBSCEEE--EETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CEEEEEeCccCCCcceeEEEEEcCCCCe-EEeCCCCChhhccccEE--EECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 44555555 22 478889987653 34433332211111122 2356677777654 468999987765
Q ss_pred ---eeeeEecCcccceeEEEEeeCCCcEEEEeecC-----CeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEE
Q 017194 137 ---LYKSLRAGHSSICSSVQFIPWKPWEVISGGLD-----SKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAI 208 (375)
Q Consensus 137 ---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 208 (375)
.+..+. ...... +++. -++. +++.|+.+ ..+.+||+.+.+-...-... .+..-.++
T Consensus 92 ~W~~~~~~p-~~r~~~-~~~~-~~~~-lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p------------~~r~~~~~ 155 (301)
T 2vpj_A 92 VWYSVAPMN-VRRGLA-GATT-LGDM-IYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQ------------TAREGAGL 155 (301)
T ss_dssp CCEEECCCS-SCCBSC-EEEE-ETTE-EEEECCBCSSCBCCEEEEEETTTTEEEEEEECS------------SCCBSCEE
T ss_pred eeEECCCCC-CCccce-eEEE-ECCE-EEEEcccCCCcccceEEEEcCCCCeEEECCCCC------------CCcccceE
Confidence 222222 111111 2222 2444 67777654 36888998876543332211 01111222
Q ss_pred eecCCccccCCCCEEEEEecC-----CcEEEEeCCCc
Q 017194 209 AIPDADMLDKTNKICVVAKGD-----GVVDVINIESE 240 (375)
Q Consensus 209 ~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~ 240 (375)
+.. ++++++.|+.+ ..+.+||+.+.
T Consensus 156 ~~~-------~~~iyv~GG~~~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 156 VVA-------SGVIYCLGGYDGLNILNSVEKYDPHTG 185 (301)
T ss_dssp EEE-------TTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred EEE-------CCEEEEECCCCCCcccceEEEEeCCCC
Confidence 222 47777777654 35777887753
No 309
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.92 E-value=0.018 Score=55.64 Aligned_cols=178 Identities=10% Similarity=-0.034 Sum_probs=91.6
Q ss_pred CCceeEEEEecCC-----CCEEEEeCC-CCcEEEEecccCceeeEeeec-CccEEEEEEe--CCCCeEEEEcCCCeEEEE
Q 017194 15 KATATCCIASRDR-----PGFVASSGE-DGCICWFDLRSKDVQLVTDVG-NGPVTSLCFK--SGNEDIIYVSSGKEVKSF 85 (375)
Q Consensus 15 ~~~i~~~~~~~~~-----~~~l~s~~~-d~~i~iw~~~~~~~~~~~~~~-~~~v~~l~~~--~~~~~l~~~~~d~~i~iw 85 (375)
...|.|+++.|.. .+++|.|.. |++++|+++.+.+.+....-. .....++.+. ....+|..|-.||.+.-+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 5679999998642 368999986 999999999876654332211 2234444443 234578888889988666
Q ss_pred ECC--CCCcccccccccCCCcceeEEEEcCCCCe-EEEEeCCCcEEEEeCcCceeeeeEecCcccceeEE-EEeeCC-Cc
Q 017194 86 DVH--MPASWRPLESYNYNKEEINQIVCNPKSSF-LACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSV-QFIPWK-PW 160 (375)
Q Consensus 86 d~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~-~~~~~~-~~ 160 (375)
.+. ++.....-..+-+ ..++.-..+...+.. +++.+ +....++.-+ ++.... . -.-..+..+ .|+... +.
T Consensus 633 ~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~-~~l~~s-~-l~~~~v~~~~~F~se~~~~ 707 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACS-DRPTVIYSSN-HKLVFS-N-VNLKEVNYMCPLNSDGYPD 707 (1158)
T ss_dssp EECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEES-SSCEEEEESS-SSEEEE-E-BSSSCCCEEEEECCSSSTT
T ss_pred EEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEEC-CCCEEEEEcC-CceEEe-c-cChHHhceEeccCcccCCC
Confidence 554 3322111111222 334444444444433 33333 4444444432 222111 1 111233333 343321 11
Q ss_pred EEEEeecCCeEEEeeCCCCCcc--eEEecCCCCCCCCCCcccCCCceeEEeecC
Q 017194 161 EVISGGLDSKLVMWDFSKGRPN--KIVNFGLPENNGNAGQCYNPAFVHAIAIPD 212 (375)
Q Consensus 161 ~l~~~~~d~~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 212 (375)
-++..+ ++.+++..+...+.. +.+.++ ..+..++++|
T Consensus 708 g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~--------------~Tprri~y~~ 746 (1158)
T 3ei3_A 708 SLALAN-NSTLTIGTIDEIQKLHIRTVPLY--------------ESPRKICYQE 746 (1158)
T ss_dssp EEEEEC-SSCEEEEEECCSSSEEEEEEECS--------------SEEEEEEEEG
T ss_pred cEEEEc-CCceEEEEecccCCeeEEEEeCC--------------CCceEEEEcC
Confidence 244333 456888887654333 333333 5667777777
No 310
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.90 E-value=0.0072 Score=50.26 Aligned_cols=103 Identities=12% Similarity=0.070 Sum_probs=61.3
Q ss_pred ccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccc---cCCCcceeEEEEcCC---CCeEEEEeC----C----
Q 017194 59 GPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESY---NYNKEEINQIVCNPK---SSFLACADD----G---- 124 (375)
Q Consensus 59 ~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~v~~~~~~~~---~~~l~~~~~----d---- 124 (375)
.....++|.|+|+.+ ++..++.|++++. +++ ..+..+ .........++++|+ +..|+++.. +
T Consensus 29 ~~P~~ia~~pdG~l~-V~e~~g~I~~~d~-~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYL-VTERPGRLVLISP-SGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp SCEEEEEEEETTEEE-EEETTTEEEEECS-SCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCeEEEEcCCCeEE-EEeCCCEEEEEeC-CCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 456789999999744 4555699999873 333 222211 112356889999997 555555443 2
Q ss_pred CcEEEEeCcCc-------ee-eeeEecCcccceeEEEEeeCCCcEEEEee
Q 017194 125 GDVKIIDIRQH-------CL-YKSLRAGHSSICSSVQFIPWKPWEVISGG 166 (375)
Q Consensus 125 g~i~iwd~~~~-------~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 166 (375)
..|..|+.... +. +..+..........|+|.|+|. ++++.+
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G 153 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTG 153 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECC
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEEC
Confidence 56777776543 11 1122211112356799999997 566543
No 311
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.87 E-value=0.022 Score=55.05 Aligned_cols=146 Identities=8% Similarity=0.059 Sum_probs=86.4
Q ss_pred CCeEEEEe----------CCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceE
Q 017194 115 SSFLACAD----------DGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKI 184 (375)
Q Consensus 115 ~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~ 184 (375)
..++++|. ..|.|.+|++..++.....+....++|++++--. | .|++|- ..+|++|++...+.+.
T Consensus 844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~-g--~Lla~i-g~~l~vy~l~~~~~L~- 918 (1158)
T 3ei3_A 844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFN-G--KLLASI-NSTVRLYEWTTEKELR- 918 (1158)
T ss_dssp CCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEET-T--EEEEEE-TTEEEEEEECTTSCEE-
T ss_pred CEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeC-C--EEEEEc-CCEEEEEECCCCceEE-
Confidence 46888876 3478999998755433222213467788876443 3 344443 4789999998765444
Q ss_pred EecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeeccccc
Q 017194 185 VNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNI 264 (375)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~ 264 (375)
.+.. .-..+..+.... .++++++|..-..+.++..+..
T Consensus 919 ~~~~------------~~~~i~~~~l~~------~~~~I~vgD~~~Sv~~~~y~~~------------------------ 956 (1158)
T 3ei3_A 919 TECN------------HYNNIMALYLKT------KGDFILVGDLMRSVLLLAYKPM------------------------ 956 (1158)
T ss_dssp EEEE------------ECCCSCEEEEEE------ETTEEEEEESSBCEEEEEEETT------------------------
T ss_pred EEee------------ccccEEEEEEec------cCCEEEEEEhhheEEEEEEEcC------------------------
Confidence 2211 001122222222 3788999988777777654321
Q ss_pred ceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCC
Q 017194 265 RDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSR 324 (375)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~ 324 (375)
...+..+. -..+...++++.+- .+ ..++.+..+|.|.+.....
T Consensus 957 ------------~~~L~~~a-~D~~~~~vta~~~l---d~-~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 957 ------------EGNFEEIA-RDFNPNWMSAVEIL---DD-DNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp ------------TTEEEEEE-ECCSCBCEEEEEEE---ET-TEEEEEETTSEEEEEEECT
T ss_pred ------------CCeEEEEE-eecccccEEEEEEE---cc-CcEEEEcCCCcEEEEecCC
Confidence 11112111 12235678888886 34 4778899999999998766
No 312
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.87 E-value=0.0081 Score=49.93 Aligned_cols=145 Identities=12% Similarity=0.101 Sum_probs=79.5
Q ss_pred CCceeEEEEecCCCCEEEEeCCCCcEEEEecccCc-eeeEee---ecCccEEEEEEeCC---CCeEEEEcC----C----
Q 017194 15 KATATCCIASRDRPGFVASSGEDGCICWFDLRSKD-VQLVTD---VGNGPVTSLCFKSG---NEDIIYVSS----G---- 79 (375)
Q Consensus 15 ~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~-~~~~~~---~~~~~v~~l~~~~~---~~~l~~~~~----d---- 79 (375)
-..-..|+|.|+ ++++++ ..+|.|.+++ ..++ .+..+. ........|+++|+ +..|..+.. +
T Consensus 28 l~~P~~ia~~pd-G~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPLGG-GRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEEET-TEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEcCC-CeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 345678999998 775555 5558999997 3444 222211 12356889999997 444544332 2
Q ss_pred CeEEEEECCCCC-c---ccc-ccccc-CCCcceeEEEEcCCCCeEEEEeC-------------CCcEEEEeCcCce----
Q 017194 80 KEVKSFDVHMPA-S---WRP-LESYN-YNKEEINQIVCNPKSSFLACADD-------------GGDVKIIDIRQHC---- 136 (375)
Q Consensus 80 ~~i~iwd~~~~~-~---~~~-~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~~---- 136 (375)
+.|..|+..... . .+. +..+. ........++|.|||.++++.+. .|.|..++....-
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 567777766431 0 111 11121 11123467999999976665432 2456666654210
Q ss_pred ---eeeeEecCcccceeEEEEee-CCCcEEEE
Q 017194 137 ---LYKSLRAGHSSICSSVQFIP-WKPWEVIS 164 (375)
Q Consensus 137 ---~~~~~~~~~~~~v~~~~~~~-~~~~~l~~ 164 (375)
....+..++. ....++|+| ++. ++++
T Consensus 185 pf~~~~i~a~G~r-np~Gla~d~~~g~-l~v~ 214 (354)
T 3a9g_A 185 PFPNSPIWSYGHR-NPQGIDWHRASGV-MVAT 214 (354)
T ss_dssp SSTTCCEEEECCS-CCCEEEECTTTCC-EEEE
T ss_pred CCCCCcEEEEccC-CcceEEEeCCCCC-EEEE
Confidence 1122221443 357899999 554 4444
No 313
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.86 E-value=0.0067 Score=48.71 Aligned_cols=201 Identities=14% Similarity=0.204 Sum_probs=123.8
Q ss_pred EEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCccccccccc
Q 017194 21 CIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYN 100 (375)
Q Consensus 21 ~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 100 (375)
.-.+|. .+.+|--. ..++.|+|+++.+.++...- ...|.-=.|-.+. .|+..+ +..|+-|+++... .+.+.+.
T Consensus 72 AIMnP~-~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s--~P~kvFd 144 (365)
T 2xzh_A 72 AIMNPA-SKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGES--QPVKMFD 144 (365)
T ss_dssp EEECSS-SSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSS-EEEEEE-SSEEEEEESSTTC--CCEEEEE
T ss_pred eeeCCC-ccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCC-eEEEEc-CCcEEEEcccCCC--CCceeee
Confidence 456787 67776554 57899999999988888775 4577777776543 455554 6789999997532 3333333
Q ss_pred CC----CcceeEEEEcCCCCeEEEEe-------CCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCC--CcEEEEeec
Q 017194 101 YN----KEEINQIVCNPKSSFLACAD-------DGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWK--PWEVISGGL 167 (375)
Q Consensus 101 ~~----~~~v~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~ 167 (375)
.| ...|..-..+++.++++..+ -.|.+.+|..+.+ .-+.+. +|......+.+..+. ..+|+.+..
T Consensus 145 R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ie-Ghaa~F~~~~~~g~~~~~~lf~fa~r 222 (365)
T 2xzh_A 145 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIE-GHAASFAQFKMEGNAEESTLFCFAVR 222 (365)
T ss_dssp CCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEEC-CSEEEEEEECCTTCSSCEEEEEEEEE
T ss_pred cchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceee-eeeeeeEEEecCCCCCCceEEEEEEe
Confidence 22 35677888899999876544 2367889997644 445566 776544333322111 113333322
Q ss_pred ---CCeEEEeeCCCC---Cc---ceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCC
Q 017194 168 ---DSKLVMWDFSKG---RP---NKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIE 238 (375)
Q Consensus 168 ---d~~i~~wd~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 238 (375)
.+++.+-++... .+ .+..+...|+. ...+..-++.+++ ....+..-+.-|.|++||+.
T Consensus 223 ~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppe-------a~~DFPVamqvs~------kygviyviTK~G~ihlyDle 289 (365)
T 2xzh_A 223 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE-------AQNDFPVAMQISE------KHDVVFLITKYGYIHLYDLE 289 (365)
T ss_dssp ETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTT-------CTTCCEEEEEEET------TTTEEEEEETTSEEEEEETT
T ss_pred cCCCcEEEEEEcCCCCCCCCCcccccceeeCCcc-------ccCCceEEEEecc------cCCEEEEEeCCcEEEEEEcc
Confidence 257888887432 11 11111111110 0134556777777 68889999999999999999
Q ss_pred Cccee
Q 017194 239 SELNI 243 (375)
Q Consensus 239 ~~~~~ 243 (375)
++...
T Consensus 290 Tgt~i 294 (365)
T 2xzh_A 290 TGTCI 294 (365)
T ss_dssp TCCEE
T ss_pred cCcEE
Confidence 97443
No 314
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.79 E-value=0.0096 Score=48.35 Aligned_cols=104 Identities=8% Similarity=0.053 Sum_probs=55.4
Q ss_pred CeEEEEcCC--CeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeCC----CcEEEEeCcCceeee--eEe
Q 017194 71 EDIIYVSSG--KEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDG----GDVKIIDIRQHCLYK--SLR 142 (375)
Q Consensus 71 ~~l~~~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~--~~~ 142 (375)
..++.|+.+ ..+.+||..+.+ +..+.........-..+. -++..++.|+.+ ..+.+||+.+.+-.. .+.
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYS-WTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTE-EEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred eEEEEeCCCCCceEEEecCCCCC-EecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 345555543 578899988653 344433322111222222 256677777654 568899988764322 222
Q ss_pred cCcccceeEEEEeeCCCcEEEEeecC------CeEEEeeCCCCCc
Q 017194 143 AGHSSICSSVQFIPWKPWEVISGGLD------SKLVMWDFSKGRP 181 (375)
Q Consensus 143 ~~~~~~v~~~~~~~~~~~~l~~~~~d------~~i~~wd~~~~~~ 181 (375)
...... +++. -++. +++.|+.+ ..+.+||..+.+-
T Consensus 90 -~~r~~~-~~~~-~~~~-iyv~GG~~~~~~~~~~~~~~d~~~~~W 130 (306)
T 3ii7_A 90 -TPRDSL-AACA-AEGK-IYTSGGSEVGNSALYLFECYDTRTESW 130 (306)
T ss_dssp -SCCBSC-EEEE-ETTE-EEEECCBBTTBSCCCCEEEEETTTTEE
T ss_pred -ccccce-eEEE-ECCE-EEEECCCCCCCcEeeeEEEEeCCCCce
Confidence 111111 2222 2444 77777765 4688899887653
No 315
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.76 E-value=0.011 Score=48.20 Aligned_cols=183 Identities=11% Similarity=0.023 Sum_probs=92.1
Q ss_pred EEEEeCCCCcEEEEecccCceee-EeeecCccEEEEEEeCCCCeEEEEcC-----C------CeEEEEECCCCCcccccc
Q 017194 30 FVASSGEDGCICWFDLRSKDVQL-VTDVGNGPVTSLCFKSGNEDIIYVSS-----G------KEVKSFDVHMPASWRPLE 97 (375)
Q Consensus 30 ~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~l~~~~~-----d------~~i~iwd~~~~~~~~~~~ 97 (375)
+++.|+ ..+.+||..+++-.. .+..............++..++.|+. . ..+.+||..+.+ +..+.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~-W~~~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE-WLGMP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE-EEECC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCe-EEECC
Confidence 455666 469999998776432 11111122222333456777777773 1 137788887643 34333
Q ss_pred cccCCCcceeEEEEcCCCCeEEEEeCC--------CcEEEEeCcCcee--eeeEecCcccceeEEEEeeCCCcEEEEeec
Q 017194 98 SYNYNKEEINQIVCNPKSSFLACADDG--------GDVKIIDIRQHCL--YKSLRAGHSSICSSVQFIPWKPWEVISGGL 167 (375)
Q Consensus 98 ~~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 167 (375)
........-..+.+ +++.++.|+.+ ..+.+||+.+.+- +..+. ..... .+++. -++. +++.|+.
T Consensus 84 ~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~-~~~~~-~~~~-iyv~GG~ 157 (315)
T 4asc_A 84 PLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLP-YVVYG-HTVLS-HMDL-VYVIGGK 157 (315)
T ss_dssp CBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCS-SCCBS-CEEEE-ETTE-EEEECCB
T ss_pred CCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCC-Ccccc-eeEEE-ECCE-EEEEeCC
Confidence 33211111112222 55666666632 4588999887632 22222 11111 12222 3444 7777776
Q ss_pred -C-----CeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCC-----cEEEEe
Q 017194 168 -D-----SKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDG-----VVDVIN 236 (375)
Q Consensus 168 -d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d 236 (375)
+ ..+.+||+.+.+-...-... .+..-.+++.. ++++++.|+.++ .+.+||
T Consensus 158 ~~~~~~~~~~~~yd~~~~~W~~~~~~p------------~~r~~~~~~~~-------~~~iyv~GG~~~~~~~~~~~~yd 218 (315)
T 4asc_A 158 GSDRKCLNKMCVYDPKKFEWKELAPMQ------------TARSLFGATVH-------DGRIIVAAGVTDTGLTSSAEVYS 218 (315)
T ss_dssp CTTSCBCCCEEEEETTTTEEEECCCCS------------SCCBSCEEEEE-------TTEEEEEEEECSSSEEEEEEEEE
T ss_pred CCCCcccceEEEEeCCCCeEEECCCCC------------CchhceEEEEE-------CCEEEEEeccCCCCccceEEEEE
Confidence 2 46888998765432211111 01111222332 477888887654 477888
Q ss_pred CCCc
Q 017194 237 IESE 240 (375)
Q Consensus 237 ~~~~ 240 (375)
+.+.
T Consensus 219 ~~~~ 222 (315)
T 4asc_A 219 ITDN 222 (315)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 8753
No 316
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.76 E-value=0.01 Score=47.70 Aligned_cols=233 Identities=10% Similarity=0.154 Sum_probs=132.1
Q ss_pred CCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCC
Q 017194 36 EDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKS 115 (375)
Q Consensus 36 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 115 (375)
.+..|.|.|+..+....+-.- .-.+.-.+|..+.+|.-. ...+.++|+++...+ +.+.. ..+|.-=.|-.+.
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrpi---~AdsAIMnP~~~ViALra-g~~LQiFnletK~kl---ks~~~-~e~VvfWkWis~~ 118 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKM---KAHTM-TDDVTFWKWISLN 118 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEEC---CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEE---EEEEC-SSCEEEEEECSSS
T ss_pred CCCEEEEEECCCCCCcccccc---ccceeeeCCCccEEEEec-CCeEEEechHHhhhh---cceec-CCccEEEEecCCC
Confidence 344789999987665433221 112344588887766655 789999999975443 33332 3567777776554
Q ss_pred CeEEEEeCCCcEEEEeCcC-ceeeeeEecCcc----cceeEEEEeeCCCcEEEEee------cCCeEEEeeCCCCCcceE
Q 017194 116 SFLACADDGGDVKIIDIRQ-HCLYKSLRAGHS----SICSSVQFIPWKPWEVISGG------LDSKLVMWDFSKGRPNKI 184 (375)
Q Consensus 116 ~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~----~~v~~~~~~~~~~~~l~~~~------~d~~i~~wd~~~~~~~~~ 184 (375)
.|+..+ +..|+-|+++. ..+.+.+. -|. ..|..-..+++.+|++++|- -.|.+.+|..+.+ ..+.
T Consensus 119 -~L~lVT-~taVyHWs~~~~s~P~kvFd-R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ 194 (365)
T 2xzh_A 119 -TVALVT-DNAVYHWSMEGESQPVKMFD-RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQP 194 (365)
T ss_dssp -EEEEEE-SSEEEEEESSTTCCCEEEEE-CCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEE
T ss_pred -eEEEEc-CCcEEEEcccCCCCCceeee-cchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccce
Confidence 444443 36799999974 34555565 443 35666677888888777664 2367889997743 2233
Q ss_pred EecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEec---CCcEEEEeCCCcc-eeecccccCCCCCCceeec
Q 017194 185 VNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKG---DGVVDVINIESEL-NISRSKSTTKPLKGSQSTS 260 (375)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~s 260 (375)
++ + |...-..+.+... .....+++.+.. .+++++.++.... ....+.
T Consensus 195 ie-G------------haa~F~~~~~~g~---~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~------------- 245 (365)
T 2xzh_A 195 IE-G------------HAASFAQFKMEGN---AEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFP------------- 245 (365)
T ss_dssp EC-C------------SEEEEEEECCTTC---SSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCC-------------
T ss_pred ee-e------------eeeeeEEEecCCC---CCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcc-------------
Confidence 32 2 1111111111100 001223443332 2588888885420 000000
Q ss_pred ccccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceee
Q 017194 261 KVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGV 328 (375)
Q Consensus 261 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 328 (375)
.+.......-..-.+-.-++..| +.-..+..-+.-|.|.+||++++..+
T Consensus 246 ----------------kk~vdi~fppea~~DFPVamqvs---~kygviyviTK~G~ihlyDleTgt~i 294 (365)
T 2xzh_A 246 ----------------KKAVDVFFPPEAQNDFPVAMQIS---EKHDVVFLITKYGYIHLYDLETGTCI 294 (365)
T ss_dssp ----------------CEEEEECCCTTCTTCCEEEEEEE---TTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred ----------------cccceeeCCccccCCceEEEEec---ccCCEEEEEeCCcEEEEEEcccCcEE
Confidence 00111111222234556678888 67778888888899999999999654
No 317
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.66 E-value=0.019 Score=48.09 Aligned_cols=202 Identities=14% Similarity=0.216 Sum_probs=125.3
Q ss_pred EEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccc
Q 017194 20 CCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESY 99 (375)
Q Consensus 20 ~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 99 (375)
+.-.+|. .+.+|--. ..++.|+|+++.+.++...- ...|.-=.|-.+. .|+..+ +..|+-|++.... .+.+.+
T Consensus 70 sAIMnP~-~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s--~P~kvF 142 (494)
T 1bpo_A 70 SAIMNPA-SKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGES--QPVKMF 142 (494)
T ss_dssp EEEECSS-SSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSC--CCEEEE
T ss_pred eeeeCCC-CcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCC-eEEEEc-CCeeEEecccCCC--Cchhhe
Confidence 3456777 56666554 57899999999888887775 4466666775443 455554 6789999997532 333333
Q ss_pred cCC----CcceeEEEEcCCCCeEEEEe-------CCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCC--CcEEEEee
Q 017194 100 NYN----KEEINQIVCNPKSSFLACAD-------DGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWK--PWEVISGG 166 (375)
Q Consensus 100 ~~~----~~~v~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~ 166 (375)
..| ...|..-..+++.++++..+ -.|.+.+|..+.+ .-+.+. +|......+....+. ..++..+.
T Consensus 143 dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ie-Ghaa~F~~~~~~g~~~~~~lf~fa~ 220 (494)
T 1bpo_A 143 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIE-GHAASFAQFKMEGNAEESTLFCFAV 220 (494)
T ss_dssp ECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEEC-CSEEEEEEEECTTCSSEEEEEEEEE
T ss_pred ecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchhe-eeeeeeEEEecCCCCCCceEEEEEE
Confidence 322 35677888899999876543 2467889997644 345566 776655444332111 11333333
Q ss_pred c---CCeEEEeeCCCC---C---cceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeC
Q 017194 167 L---DSKLVMWDFSKG---R---PNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINI 237 (375)
Q Consensus 167 ~---d~~i~~wd~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 237 (375)
. .+++.+-++... . ..+..+...|+. ...+..-++.+++ ....+..-+.-|.|++||+
T Consensus 221 r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe-------~~~DFPvamqvs~------kygviyviTK~G~i~lyDl 287 (494)
T 1bpo_A 221 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE-------AQNDFPVAMQISE------KHDVVFLITKYGYIHLYDL 287 (494)
T ss_dssp CSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTT-------STTCCEEEEEEET------TTTEEEEEETTSEEEEEET
T ss_pred ecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcc-------cccCceeEEEecc------cCCEEEEEecCceEEEEec
Confidence 3 267888887542 1 111222111110 0134566788887 6888899999999999999
Q ss_pred CCccee
Q 017194 238 ESELNI 243 (375)
Q Consensus 238 ~~~~~~ 243 (375)
.++..+
T Consensus 288 eTgt~i 293 (494)
T 1bpo_A 288 ETGTCI 293 (494)
T ss_dssp TTCCEE
T ss_pred ccceee
Confidence 997444
No 318
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.65 E-value=0.018 Score=47.57 Aligned_cols=157 Identities=16% Similarity=0.116 Sum_probs=94.3
Q ss_pred ceeEEEEecCCCCEEEEeC------------CCCcEEEEecccCc-eeeEee--e-----cCccEEEEEEeC--CCC-eE
Q 017194 17 TATCCIASRDRPGFVASSG------------EDGCICWFDLRSKD-VQLVTD--V-----GNGPVTSLCFKS--GNE-DI 73 (375)
Q Consensus 17 ~i~~~~~~~~~~~~l~s~~------------~d~~i~iw~~~~~~-~~~~~~--~-----~~~~v~~l~~~~--~~~-~l 73 (375)
..-.+...|+ |..+++++ .+|.|.++|.++.. ....+. + .......+.+.+ ++. +|
T Consensus 51 G~EDi~~~~~-G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEILPN-GLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEECTT-SEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEcCC-CeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 4456777886 66555552 68999999987431 122222 1 123566777765 343 34
Q ss_pred EEEc-C--CCeEEEEECCCC-CcccccccccCC-CcceeEEEEcCCCCeEEEEe-----------------CCCcEEEEe
Q 017194 74 IYVS-S--GKEVKSFDVHMP-ASWRPLESYNYN-KEEINQIVCNPKSSFLACAD-----------------DGGDVKIID 131 (375)
Q Consensus 74 ~~~~-~--d~~i~iwd~~~~-~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~-----------------~dg~i~iwd 131 (375)
+++. . +.++.+|++..+ .....+..+.+. -...+.+.+.++|.+.++.. ..|.|..+|
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 4442 2 467888887643 223333333321 23578899999998776653 124455555
Q ss_pred CcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCC
Q 017194 132 IRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178 (375)
Q Consensus 132 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~ 178 (375)
. ++. ..+. ..-...+.++|+|+++.++++-+..+.|..|++..
T Consensus 210 ~--~~~-~~~~-~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 210 P--NDV-RVVA-EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp T--TCC-EEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred C--CeE-EEee-cCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 4 332 2232 23346799999999986666666788999999874
No 319
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.65 E-value=0.017 Score=47.00 Aligned_cols=105 Identities=7% Similarity=0.013 Sum_probs=52.6
Q ss_pred CCCeEEEEcCC----CeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeC----C-----CcEEEEeCcCc
Q 017194 69 GNEDIIYVSSG----KEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADD----G-----GDVKIIDIRQH 135 (375)
Q Consensus 69 ~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d-----g~i~iwd~~~~ 135 (375)
++..++.|+.+ ..+.+||..+.+ +..+.........- +++. .++..++.|+. + ..+.+||+.+.
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGT-WLRLADLQVPRSGL-AGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 100 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTE-EEECCCCSSCCBSC-EEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCe-EeECCCCCcccccc-eEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence 44555555532 468888887643 33333332111111 2222 25666666654 2 46888998766
Q ss_pred ee--eeeEecCcccceeEEEEeeCCCcEEEEeecC-----CeEEEeeCCCCC
Q 017194 136 CL--YKSLRAGHSSICSSVQFIPWKPWEVISGGLD-----SKLVMWDFSKGR 180 (375)
Q Consensus 136 ~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~ 180 (375)
+- +..+. ........ +.. ++. +++.|+.+ ..+.+||+.+.+
T Consensus 101 ~W~~~~~~p-~~r~~~~~-~~~-~~~-iyv~GG~~~~~~~~~~~~yd~~~~~ 148 (308)
T 1zgk_A 101 QWSPCAPMS-VPRNRIGV-GVI-DGH-IYAVGGSHGCIHHNSVERYEPERDE 148 (308)
T ss_dssp EEEECCCCS-SCCBTCEE-EEE-TTE-EEEECCEETTEECCCEEEEETTTTE
T ss_pred eEeECCCCC-cCccccEE-EEE-CCE-EEEEcCCCCCcccccEEEECCCCCe
Confidence 42 22222 11111122 222 444 67777643 357888887654
No 320
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.62 E-value=0.022 Score=47.78 Aligned_cols=234 Identities=10% Similarity=0.155 Sum_probs=133.0
Q ss_pred CCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCC
Q 017194 36 EDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKS 115 (375)
Q Consensus 36 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 115 (375)
.+..|.|.|+..+..+..-.. .-.+.-.+|..+.++.-. ..++.++|+++...+ +.+.. ..+|.--.|-.+.
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi---~AdsAIMnP~~~iiALra-g~~lQiFnle~K~kl---ks~~~-~e~VvfWkWis~~ 117 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKM---KAHTM-TDDVTFWKWISLN 117 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEEC---CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEE---EEEEC-SSCCCEEEEEETT
T ss_pred CCCeEEEEECCCCCcceeccc---ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhh---cceec-CCCceEEEecCCC
Confidence 344799999988665433221 112455688887776655 789999999975443 33322 3456666665443
Q ss_pred CeEEEEeCCCcEEEEeCcCc-eeeeeEecCcc----cceeEEEEeeCCCcEEEEee------cCCeEEEeeCCCCCcceE
Q 017194 116 SFLACADDGGDVKIIDIRQH-CLYKSLRAGHS----SICSSVQFIPWKPWEVISGG------LDSKLVMWDFSKGRPNKI 184 (375)
Q Consensus 116 ~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~----~~v~~~~~~~~~~~~l~~~~------~d~~i~~wd~~~~~~~~~ 184 (375)
.|+..+ +..|+-|++... .+.+.|. -|. ..|..-..+++.+|++++|- -.|.+.+|..+.+ ..+.
T Consensus 118 -~l~lVT-~taVyHWsi~~~s~P~kvFd-R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ 193 (494)
T 1bpo_A 118 -TVALVT-DNAVYHWSMEGESQPVKMFD-RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQP 193 (494)
T ss_dssp -EEEEEC-SSEEEEEESSSSCCCEEEEE-CCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEE
T ss_pred -eEEEEc-CCeeEEecccCCCCchhhee-cchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccch
Confidence 455443 467999999743 4555565 442 45667777888888777664 2467889998743 2333
Q ss_pred EecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEec---CCcEEEEeCCCcceeecccccCCCCCCceeecc
Q 017194 185 VNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKG---DGVVDVINIESELNISRSKSTTKPLKGSQSTSK 261 (375)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~ 261 (375)
++ + |...-..+.+... .....+++.+.. .+.+++.++....... .+..
T Consensus 194 ie-G------------haa~F~~~~~~g~---~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~---~~f~---------- 244 (494)
T 1bpo_A 194 IE-G------------HAASFAQFKMEGN---AEESTLFCFAVRGQAGGKLHIIEVGTPPTGN---QPFP---------- 244 (494)
T ss_dssp EC-C------------SEEEEEEEECTTC---SSEEEEEEEEECSTTCCEEEEEECSCCCTTC---CCCC----------
T ss_pred he-e------------eeeeeEEEecCCC---CCCceEEEEEEecCCCcEEEEEEcCCCccCC---CCcc----------
Confidence 33 2 1111111111110 001223444433 2789998886420000 0000
Q ss_pred cccceeeeeeeecCCcceeEeeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceee
Q 017194 262 VNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGV 328 (375)
Q Consensus 262 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 328 (375)
.+.......-..-.+-.-++..| +.-..+..-+.-|.|.+||+.++..+
T Consensus 245 ---------------kk~vdv~fppe~~~DFPvamqvs---~kygviyviTK~G~i~lyDleTgt~i 293 (494)
T 1bpo_A 245 ---------------KKAVDVFFPPEAQNDFPVAMQIS---EKHDVVFLITKYGYIHLYDLETGTCI 293 (494)
T ss_dssp ---------------CEEEECCCCTTSTTCCEEEEEEE---TTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred ---------------ceeeeeeCCcccccCceeEEEec---ccCCEEEEEecCceEEEEecccceee
Confidence 00111111112234556678888 77778888888999999999999654
No 321
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.58 E-value=0.024 Score=47.13 Aligned_cols=140 Identities=10% Similarity=0.066 Sum_probs=75.9
Q ss_pred CceeEEEEecCCCC-EEEEeCCCCcEEEEecccCcee---eEe----eecCccEEEEEEeCC---CCeEEEEc-C-----
Q 017194 16 ATATCCIASRDRPG-FVASSGEDGCICWFDLRSKDVQ---LVT----DVGNGPVTSLCFKSG---NEDIIYVS-S----- 78 (375)
Q Consensus 16 ~~i~~~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~---~~~----~~~~~~v~~l~~~~~---~~~l~~~~-~----- 78 (375)
..-..|+|.|+ ++ ++++ ...|.|++++.. +... ..+ .........|+++|+ +..|..+. .
T Consensus 18 ~~P~~i~~~pd-G~~l~V~-e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 18 DHPWALAFLPD-NHGMLIT-LRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp SSEEEEEECST-TCCEEEE-ETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CCcEEEEEcCC-CCEEEEE-eCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 45678999999 77 5554 457899999853 3221 111 112346789999995 44444432 2
Q ss_pred --CCeEEEEECCCCC----cccc-ccccc---CCCcceeEEEEcCCCCeEEEEeC-------------CCcEEEEeCcCc
Q 017194 79 --GKEVKSFDVHMPA----SWRP-LESYN---YNKEEINQIVCNPKSSFLACADD-------------GGDVKIIDIRQH 135 (375)
Q Consensus 79 --d~~i~iwd~~~~~----~~~~-~~~~~---~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~ 135 (375)
...|..+++.... ..+. +..+. .....-..++|.||+.++++.+. .|.|.-++.+..
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 2356666665321 1111 11111 01122467999999965555433 245777776532
Q ss_pred e------------eeeeEecCcccceeEEEEee-CCC
Q 017194 136 C------------LYKSLRAGHSSICSSVQFIP-WKP 159 (375)
Q Consensus 136 ~------------~~~~~~~~~~~~v~~~~~~~-~~~ 159 (375)
- ....+..++. ....++|.| .+.
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~ 210 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNA 210 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTE
T ss_pred CCCCCCCcCCCCCCccEEEEcCc-CccceEEECCCCC
Confidence 0 1222321443 468899999 554
No 322
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.58 E-value=0.0099 Score=49.51 Aligned_cols=66 Identities=11% Similarity=0.194 Sum_probs=36.2
Q ss_pred CCCeEEEEcCC-CeEEEEECCC-CCccccccccc-CCCcceeEEEEcCCCCeEEEEeC-C---------CcEEEEeCcCc
Q 017194 69 GNEDIIYVSSG-KEVKSFDVHM-PASWRPLESYN-YNKEEINQIVCNPKSSFLACADD-G---------GDVKIIDIRQH 135 (375)
Q Consensus 69 ~~~~l~~~~~d-~~i~iwd~~~-~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d---------g~i~iwd~~~~ 135 (375)
++..++.|+.+ ..+.++|+.+ ...+..+..+. .....-..+.+ +++.++.|+. + ..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 55566666543 5788899864 23445444433 11111222222 5666666665 2 46889998776
Q ss_pred e
Q 017194 136 C 136 (375)
Q Consensus 136 ~ 136 (375)
+
T Consensus 97 ~ 97 (357)
T 2uvk_A 97 S 97 (357)
T ss_dssp E
T ss_pred c
Confidence 4
No 323
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.54 E-value=0.024 Score=46.19 Aligned_cols=100 Identities=7% Similarity=0.030 Sum_probs=51.3
Q ss_pred EEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeC----C-------CcEEEEeCcCcee--ee
Q 017194 73 IIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADD----G-------GDVKIIDIRQHCL--YK 139 (375)
Q Consensus 73 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d-------g~i~iwd~~~~~~--~~ 139 (375)
++.|+ ..+.+||..+++ +.. .................++..++.|+. + ..+.+||..+.+- +.
T Consensus 8 ~~~GG--~~~~~yd~~~~~-W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANE-CYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEET--TEEEEEETTTTE-EEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEcC--CceEEECCCCCe-Eec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 34444 678999998754 332 222211122223333457777777773 1 1277888876643 21
Q ss_pred eEecCcccceeEEEEeeCCCcEEEEeecC--------CeEEEeeCCCCC
Q 017194 140 SLRAGHSSICSSVQFIPWKPWEVISGGLD--------SKLVMWDFSKGR 180 (375)
Q Consensus 140 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--------~~i~~wd~~~~~ 180 (375)
.+. ..... .+++.. ++. +++.|+.+ ..+.+||..+.+
T Consensus 84 ~~p-~~r~~-~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~~d~~~~~ 128 (315)
T 4asc_A 84 PLP-SPRCL-FGLGEA-LNS-IYVVGGREIKDGERCLDSVMCYDRLSFK 128 (315)
T ss_dssp CBS-SCEES-CEEEEE-TTE-EEEECCEESSTTCCBCCCEEEEETTTTE
T ss_pred CCC-cchhc-eeEEEE-CCE-EEEEeCCcCCCCCcccceEEEECCCCCc
Confidence 221 11111 122222 444 67777742 458889987664
No 324
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.51 E-value=0.021 Score=46.72 Aligned_cols=201 Identities=9% Similarity=0.089 Sum_probs=107.2
Q ss_pred CEEEEeCCCCcEEEEecccCceeeEeeec-CccEEEEEE--eCCCCeEEEE--cCCCeEEEEECCCCCcccccccccC-C
Q 017194 29 GFVASSGEDGCICWFDLRSKDVQLVTDVG-NGPVTSLCF--KSGNEDIIYV--SSGKEVKSFDVHMPASWRPLESYNY-N 102 (375)
Q Consensus 29 ~~l~s~~~d~~i~iw~~~~~~~~~~~~~~-~~~v~~l~~--~~~~~~l~~~--~~d~~i~iwd~~~~~~~~~~~~~~~-~ 102 (375)
..++.++.||.|.-.|.++|+.+..++.. ..++....- .+.+..++.+ ..||.|..++..++.....+..-.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47888999999999999999988887653 122222110 0112234433 5799999999887643222211000 0
Q ss_pred CcceeE---EEE-c----CCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccc------eeEEEEe-----eCCCcEEE
Q 017194 103 KEEINQ---IVC-N----PKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSI------CSSVQFI-----PWKPWEVI 163 (375)
Q Consensus 103 ~~~v~~---~~~-~----~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~------v~~~~~~-----~~~~~~l~ 163 (375)
..++.. ... . -.+..+++|+.+|.+...|+++|+.+..+..+.... ..+.... ..+. .++
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~-~v~ 169 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECEN-MIV 169 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CC-EEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCC-eEE
Confidence 111111 000 0 134578899999999999999999998887221111 0011110 1123 577
Q ss_pred EeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCccee
Q 017194 164 SGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNI 243 (375)
Q Consensus 164 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 243 (375)
.+..+..+.+.+ ++++ ...+++..-. +..+. -.+........++.+ ++++.||.|.-+|..++...
T Consensus 170 ig~~~y~v~~~~-~sG~-~W~~~~s~~~----------~~~~~-~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~ 235 (339)
T 2be1_A 170 IGKTIFELGIHS-YDGA-SYNVTYSTWQ----------QNVLD-VPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIAR 235 (339)
T ss_dssp EEEEEEECEECC-TTSC-CCCCEEEEEE----------CCTTT-HHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEE
T ss_pred EecceEEEEEEC-CCCC-eEEEeccccc----------ccccc-cccccccccccCCcE-EEECCCCEEEEEECCCCcEE
Confidence 777777787777 4554 3332211000 00000 000000000113555 55789999999999987765
Q ss_pred e
Q 017194 244 S 244 (375)
Q Consensus 244 ~ 244 (375)
.
T Consensus 236 W 236 (339)
T 2be1_A 236 W 236 (339)
T ss_dssp E
T ss_pred E
Confidence 4
No 325
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.51 E-value=0.028 Score=46.19 Aligned_cols=149 Identities=10% Similarity=0.071 Sum_probs=85.3
Q ss_pred eeeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCcee--eEe----eecCccEEEEEEeCC---CCeEEEE---
Q 017194 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQ--LVT----DVGNGPVTSLCFKSG---NEDIIYV--- 76 (375)
Q Consensus 9 ~~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~--~~~----~~~~~~v~~l~~~~~---~~~l~~~--- 76 (375)
..+...-..-+.|+|.|+ ++++++--..|.|++++...++.. ..+ .........|+++|+ +..|...
T Consensus 25 ~~va~gL~~P~~ia~~pd-G~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~ 103 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPG-GDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS 103 (347)
T ss_dssp EEEECCCSSEEEEEECTT-SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC
T ss_pred EEeecCCCCceEEEEcCC-CcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec
Confidence 344444456788999999 788877766899999987655532 111 123567889999995 3334332
Q ss_pred cCCCeEEEEECCCCC----cc---c-cccccc-CCCcceeEEEEcCCCCeEEEEeC-------------CCcEEEEeCcC
Q 017194 77 SSGKEVKSFDVHMPA----SW---R-PLESYN-YNKEEINQIVCNPKSSFLACADD-------------GGDVKIIDIRQ 134 (375)
Q Consensus 77 ~~d~~i~iwd~~~~~----~~---~-~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~ 134 (375)
..++.|.-|.+..+. .. + .+..+. .....-..+.|.||+.+.++.+. .|.|.-.+...
T Consensus 104 ~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG 183 (347)
T 3das_A 104 ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDG 183 (347)
T ss_dssp SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTS
T ss_pred CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCC
Confidence 234566667665421 11 1 111121 11123467999999977666432 35565556542
Q ss_pred ce-------eeeeEecCcccceeEEEEeeCCC
Q 017194 135 HC-------LYKSLRAGHSSICSSVQFIPWKP 159 (375)
Q Consensus 135 ~~-------~~~~~~~~~~~~v~~~~~~~~~~ 159 (375)
.- ....+..+|. ....++|+|++.
T Consensus 184 ~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~ 214 (347)
T 3das_A 184 EPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQR 214 (347)
T ss_dssp SBCTTCSSTTCCEEEBCCS-BCCEEEECTTCC
T ss_pred CccCCCCCCCCeEEeeCCC-CcceEEECCCCC
Confidence 20 1122322554 457899999876
No 326
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.50 E-value=0.033 Score=46.66 Aligned_cols=160 Identities=11% Similarity=0.153 Sum_probs=96.7
Q ss_pred eCCCCeEEEEcCCCeEEEEECCCCCccccccccc-CCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCce---------
Q 017194 67 KSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYN-YNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHC--------- 136 (375)
Q Consensus 67 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--------- 136 (375)
..+|..++.+- ++.||.-++......+.+..-. ..-..|..+..+|+|++||..+. ..|.|..+..+.
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccc
Confidence 34455555444 4677777776433333322210 01236788999999999998854 578888876321
Q ss_pred ---eeeeEecC-----cccceeEEEEeeCCCc--EEEEeecCCeEEEeeCCCCCcce-EEecCCCCCCCCCCcccCCCce
Q 017194 137 ---LYKSLRAG-----HSSICSSVQFIPWKPW--EVISGGLDSKLVMWDFSKGRPNK-IVNFGLPENNGNAGQCYNPAFV 205 (375)
Q Consensus 137 ---~~~~~~~~-----~~~~v~~~~~~~~~~~--~l~~~~~d~~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v 205 (375)
..+.+..+ ...+|..+.|+|-+.. .|++-..|+.|++||+....... .++ ...... +.-.....+
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~--k~~~~f--g~d~~~~ev 182 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLN--KPNNSF--GLDARVNDI 182 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEES--CCCSEE--ESCSSCCCE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchh--cccccc--CCCcccceE
Confidence 11233311 2467999999997642 79999999999999998632111 222 100000 000012567
Q ss_pred eEEeecCCccccCCCCEEEEEe--cCCcEEEEeCC
Q 017194 206 HAIAIPDADMLDKTNKICVVAK--GDGVVDVINIE 238 (375)
Q Consensus 206 ~~~~~~~~~~~~~~~~~l~~~~--~dg~i~i~d~~ 238 (375)
.+++|.+ ++-.|.+.+ ..|.|+-.-.-
T Consensus 183 ~S~~Fg~------~~lTLYvl~~t~~GDIYAlcP~ 211 (452)
T 3pbp_A 183 TDLEFSK------DGLTLYCLNTTEGGDIFAFYPF 211 (452)
T ss_dssp EEEEECT------TSSCEEEEECTTSCEEEEESSC
T ss_pred EEEEEcC------CCcEEEEEecCCCCCEEEECCC
Confidence 8999987 677777755 77888765543
No 327
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.44 E-value=0.023 Score=47.57 Aligned_cols=159 Identities=11% Similarity=0.080 Sum_probs=94.2
Q ss_pred CCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeeccc
Q 017194 168 DSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSK 247 (375)
Q Consensus 168 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 247 (375)
++.||.-++......+.+.... ...-..+..+..+| +|++||..+.. .|.|..+..+......
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~---------~i~f~~i~qlvlSp------sG~lLAl~g~~-~V~Vv~LP~~~~~~~~- 102 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSR---------HLVLDDTFHVISST------SGDLLCLFNDN-EIFVMEVPWGYSNVED- 102 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTT---------TCCCCTTCEEEECT------TSSEEEEECSS-EEEEEECCTTCSCCCC-
T ss_pred CCEEEEEECCCCCcceEEecCc---------ccccCceeEEEECC------CCCEEEEecCC-eEEEEEecCccccCcc-
Confidence 4678887877555556665430 00012577899999 79999988654 8999988842111000
Q ss_pred ccCCCCCCceeecccccceeeeeeeecCCcceeEe-eeee----cCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeC
Q 017194 248 STTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHL-DYSV----GGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDC 322 (375)
Q Consensus 248 ~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~ 322 (375)
++. ....++ .+.+ .....+|..+.|+|.+..+..|++-..|+.|++||+
T Consensus 103 --------------~~~------------~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl 156 (452)
T 3pbp_A 103 --------------VSI------------QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDI 156 (452)
T ss_dssp --------------HHH------------HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEET
T ss_pred --------------ccc------------ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEc
Confidence 000 000000 0111 113578999999977777789999999999999999
Q ss_pred CCceeeeecchhhhhh--hhcccccceeeeeecCCCCCcEEEee--CCCeEEE
Q 017194 323 SRFQGVQTSINNDLLI--KNINLNKKVNWLCTTPTESENLVVCD--TSKVVKV 371 (375)
Q Consensus 323 ~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~~--~dg~v~i 371 (375)
........ .-.+... ........|.+++|.+ ++-.|...+ ..|-|+-
T Consensus 157 ~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~-~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 157 LNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSK-DGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp TCTTSCCE-EESCCCSEEESCSSCCCEEEEEECT-TSSCEEEEECTTSCEEEE
T ss_pred ccCCCCCc-chhccccccCCCcccceEEEEEEcC-CCcEEEEEecCCCCCEEE
Confidence 97432111 0000000 1112235788999988 777677744 7787763
No 328
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.42 E-value=0.038 Score=45.62 Aligned_cols=157 Identities=12% Similarity=0.102 Sum_probs=88.3
Q ss_pred cEEEEEEeCCCCeEEEE------------cCCCeEEEEECCCCC-cccccccc----cCCCcceeEEEEcC--CCC-eEE
Q 017194 60 PVTSLCFKSGNEDIIYV------------SSGKEVKSFDVHMPA-SWRPLESY----NYNKEEINQIVCNP--KSS-FLA 119 (375)
Q Consensus 60 ~v~~l~~~~~~~~l~~~------------~~d~~i~iwd~~~~~-~~~~~~~~----~~~~~~v~~~~~~~--~~~-~l~ 119 (375)
....+...|+|..++++ ..+|.|.++|+++.. ..+.+... ....-....+.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 34456667776544443 158899999987421 12222221 11122455566644 343 344
Q ss_pred EEe-C--CCcEEEEeCcCc----eeeeeEecCcccceeEEEEeeCCCcEEEEee-----------------cCCeEEEee
Q 017194 120 CAD-D--GGDVKIIDIRQH----CLYKSLRAGHSSICSSVQFIPWKPWEVISGG-----------------LDSKLVMWD 175 (375)
Q Consensus 120 ~~~-~--dg~i~iwd~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-----------------~d~~i~~wd 175 (375)
++. . +..|.+|+++.. ..+..+....-...+.+.+.++|. ++++.. ..|.|..+|
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 443 2 467888877643 223344311224678999999997 555543 124555555
Q ss_pred CCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEe-cCCcEEEEeCCC
Q 017194 176 FSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAK-GDGVVDVINIES 239 (375)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~ 239 (375)
. ++ ...+..+ -...+.++|+| +++.|+++. ..+.|..|++..
T Consensus 210 ~--~~-~~~~~~~-------------l~~pNGia~sp------Dg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 210 P--ND-VRVVAEG-------------FDFANGINISP------DGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp T--TC-CEEEEEE-------------ESSEEEEEECT------TSSEEEEEEGGGTEEEEEEECT
T ss_pred C--Ce-EEEeecC-------------CcccCcceECC------CCCEEEEEeCCCCeEEEEEECC
Confidence 4 32 2222211 24578999999 788777765 568899999863
No 329
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.39 E-value=0.04 Score=44.98 Aligned_cols=184 Identities=13% Similarity=0.064 Sum_probs=90.0
Q ss_pred CEEEEeCCCCcEEEEecccCceeeE-eeecCccEEEEEEeCCCCeEEEEcC----CC-------eEEEEECCCCCccccc
Q 017194 29 GFVASSGEDGCICWFDLRSKDVQLV-TDVGNGPVTSLCFKSGNEDIIYVSS----GK-------EVKSFDVHMPASWRPL 96 (375)
Q Consensus 29 ~~l~s~~~d~~i~iw~~~~~~~~~~-~~~~~~~v~~l~~~~~~~~l~~~~~----d~-------~i~iwd~~~~~~~~~~ 96 (375)
.+++.|+. .+..||..+.+-... +..............++..++.|+. ++ .+.+||..+.+ +..+
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~-W~~~ 93 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSE-WVGL 93 (318)
T ss_dssp EEEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTE-EEEC
T ss_pred hhhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCc-EEEC
Confidence 34555554 388999887764331 1111111222233456777777773 11 27788887543 3444
Q ss_pred ccccCCCcceeEEEEcCCCCeEEEEeCC-------CcEEEEeCcCceee--eeEecCcccceeEEEEeeCCCcEEEEeec
Q 017194 97 ESYNYNKEEINQIVCNPKSSFLACADDG-------GDVKIIDIRQHCLY--KSLRAGHSSICSSVQFIPWKPWEVISGGL 167 (375)
Q Consensus 97 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 167 (375)
.........-..+.+ +++.++.|+.+ ..+.+||+.+.+-. ..+. ..... .+++. .++. +++.|+.
T Consensus 94 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~-~~~~~-~~~~-iyv~GG~ 167 (318)
T 2woz_A 94 PPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLP-IKVYG-HNVIS-HNGM-IYCLGGK 167 (318)
T ss_dssp SCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCS-SCEES-CEEEE-ETTE-EEEECCE
T ss_pred CCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCC-Ccccc-cEEEE-ECCE-EEEEcCC
Confidence 333221111122222 56667777643 24788888765422 1121 11111 11222 3454 6777764
Q ss_pred ------CCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecC-----CcEEEEe
Q 017194 168 ------DSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGD-----GVVDVIN 236 (375)
Q Consensus 168 ------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d 236 (375)
-..+.+||+.+.+-...-... .+..-.+++.. ++++++.|+.+ ..+.+||
T Consensus 168 ~~~~~~~~~~~~yd~~~~~W~~~~~~p------------~~r~~~~~~~~-------~~~iyv~GG~~~~~~~~~~~~yd 228 (318)
T 2woz_A 168 TDDKKCTNRVFIYNPKKGDWKDLAPMK------------TPRSMFGVAIH-------KGKIVIAGGVTEDGLSASVEAFD 228 (318)
T ss_dssp ESSSCBCCCEEEEETTTTEEEEECCCS------------SCCBSCEEEEE-------TTEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCCCccceEEEEcCCCCEEEECCCCC------------CCcccceEEEE-------CCEEEEEcCcCCCCccceEEEEE
Confidence 235889998876533221111 01111223332 47777877643 3466788
Q ss_pred CCCc
Q 017194 237 IESE 240 (375)
Q Consensus 237 ~~~~ 240 (375)
+.+.
T Consensus 229 ~~~~ 232 (318)
T 2woz_A 229 LKTN 232 (318)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 7753
No 330
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.36 E-value=0.048 Score=45.29 Aligned_cols=106 Identities=15% Similarity=0.161 Sum_probs=58.9
Q ss_pred ccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccc----cCCCcceeEEEEcCC---CCeEEEEeC--------
Q 017194 59 GPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESY----NYNKEEINQIVCNPK---SSFLACADD-------- 123 (375)
Q Consensus 59 ~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~----~~~~~~v~~~~~~~~---~~~l~~~~~-------- 123 (375)
.....|+|.|+|+.|+.+...|.|++++.. +.....+... .........++++|+ +..|++...
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 356799999999834455567999999854 2211122211 112346789999996 555554432
Q ss_pred CCcEEEEeCcCc--e--eeee-Eec--C---cccceeEEEEeeCCCcEEEEee
Q 017194 124 GGDVKIIDIRQH--C--LYKS-LRA--G---HSSICSSVQFIPWKPWEVISGG 166 (375)
Q Consensus 124 dg~i~iwd~~~~--~--~~~~-~~~--~---~~~~v~~~~~~~~~~~~l~~~~ 166 (375)
...|..+++... + .... +.. . .......|+|.|+|. ++++.+
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G 148 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGY-LFIALG 148 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSE-EEEEEC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCc-EEEEEC
Confidence 234666665432 1 1111 110 0 111246799999996 555543
No 331
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.13 E-value=0.077 Score=43.25 Aligned_cols=95 Identities=6% Similarity=-0.021 Sum_probs=46.9
Q ss_pred eEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeC----CC-------cEEEEeCcCceee--eeEecCccc
Q 017194 81 EVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADD----GG-------DVKIIDIRQHCLY--KSLRAGHSS 147 (375)
Q Consensus 81 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg-------~i~iwd~~~~~~~--~~~~~~~~~ 147 (375)
.+..||..+.+ +... ................++..++.|+. ++ .+.+||..+.+-. ..+. ....
T Consensus 25 ~~~~yd~~~~~-W~~~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~ 101 (318)
T 2woz_A 25 AAVAYDPMENE-CYLT-ALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLP-SARC 101 (318)
T ss_dssp EEEEEETTTTE-EEEE-EECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBS-SCBC
T ss_pred ceEEECCCCCc-eecc-cCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCC-cccc
Confidence 47889988654 2221 11111111222233456777777773 12 1778888765432 2222 1111
Q ss_pred ceeEEEEeeCCCcEEEEeecC-------CeEEEeeCCCCCc
Q 017194 148 ICSSVQFIPWKPWEVISGGLD-------SKLVMWDFSKGRP 181 (375)
Q Consensus 148 ~v~~~~~~~~~~~~l~~~~~d-------~~i~~wd~~~~~~ 181 (375)
. .+++.. ++. +++.|+.+ ..+.+||+.+.+-
T Consensus 102 ~-~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~yd~~~~~W 139 (318)
T 2woz_A 102 L-FGLGEV-DDK-IYVVAGKDLQTEASLDSVLCYDPVAAKW 139 (318)
T ss_dssp S-CEEEEE-TTE-EEEEEEEBTTTCCEEEEEEEEETTTTEE
T ss_pred c-cceEEE-CCE-EEEEcCccCCCCcccceEEEEeCCCCCE
Confidence 1 122222 444 67777754 3578888876543
No 332
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.09 E-value=0.17 Score=49.39 Aligned_cols=132 Identities=10% Similarity=0.144 Sum_probs=81.0
Q ss_pred CCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCC
Q 017194 37 DGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSS 116 (375)
Q Consensus 37 d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 116 (375)
..+|.|.|+..+..+..-. -.--+.-.+|..+.++.-+ ..++.|+|+++...+ +.+.. ..+|.--.|-.+.
T Consensus 47 ~~~vvIidl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~kl---ks~~~-~e~VvfWkWis~~- 117 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKM---KAHTM-TDDVTFWKWISLN- 117 (1630)
T ss_pred CceEEEEECCCCCCccccc---ccchhhccCCCcceEEEec-CCeEEEeehHHhhhh---ccccc-CCCceEEEecCCC-
Confidence 3478888888765432211 1122344678777665554 789999999865433 33332 3466666666544
Q ss_pred eEEEEeCCCcEEEEeCcCc-eeeeeEecCc----ccceeEEEEeeCCCcEEEEee------cCCeEEEeeCCCC
Q 017194 117 FLACADDGGDVKIIDIRQH-CLYKSLRAGH----SSICSSVQFIPWKPWEVISGG------LDSKLVMWDFSKG 179 (375)
Q Consensus 117 ~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~------~d~~i~~wd~~~~ 179 (375)
.|+..+ +..|+-|++... .+.+.|. -| ...|..-..+++.+|++++|- -.|.+.+|....+
T Consensus 118 ~l~lVT-~~aVyHW~~~~~s~P~k~fd-R~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~ 189 (1630)
T 1xi4_A 118 TVALVT-DNAVYHWSMEGESQPVKMFD-RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK 189 (1630)
T ss_pred eeEEEc-CCeEEEeccCCCCccHHHHh-cchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc
Confidence 444332 367999999742 3444443 33 346677777888888777664 3478888887753
No 333
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.08 E-value=0.033 Score=42.02 Aligned_cols=146 Identities=9% Similarity=-0.082 Sum_probs=79.5
Q ss_pred CceeEEEEecCCCCEEEEeCCCCcEEEEecccCce------eeEeee-cCccEEEEEEeCCCCeEEEEcCCCeEEEEECC
Q 017194 16 ATATCCIASRDRPGFVASSGEDGCICWFDLRSKDV------QLVTDV-GNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVH 88 (375)
Q Consensus 16 ~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~------~~~~~~-~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~ 88 (375)
..+..++|+|+ +.+.+. .+|.+.-.+..+.+. -..+-. --....++.|.|+|.+.++ .||.|+-++..
T Consensus 41 ~~~~~laf~P~-G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSPG-GELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECTT-SCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred ccceeEEECCC-ccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 46779999997 776666 667766666544221 111110 0112478999999986666 56999888764
Q ss_pred CCCccccccc----ccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCce------eeeeEecCcccceeEEEEeeCC
Q 017194 89 MPASWRPLES----YNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHC------LYKSLRAGHSSICSSVQFIPWK 158 (375)
Q Consensus 89 ~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~------~~~~~~~~~~~~v~~~~~~~~~ 158 (375)
+.....-+.. -...=..+..+.+.|+|.+.++. |+.++-....+.. ....+....-...+-+.|.+++
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G 193 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVG 193 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTS
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCC
Confidence 3221111111 00011467899999999777776 7775443322111 0111110122234456688887
Q ss_pred CcEEEEeecCCeE
Q 017194 159 PWEVISGGLDSKL 171 (375)
Q Consensus 159 ~~~l~~~~~d~~i 171 (375)
. ++++ . ++.+
T Consensus 194 ~-l~~v-~-~g~~ 203 (236)
T 1tl2_A 194 T-LFGV-Q-GGKF 203 (236)
T ss_dssp C-EEEE-E-TTEE
T ss_pred c-EEEE-e-CCeE
Confidence 5 3333 3 6643
No 334
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.06 E-value=0.096 Score=43.08 Aligned_cols=108 Identities=11% Similarity=0.099 Sum_probs=64.0
Q ss_pred cCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccc----cccCCCcceeEEEEcCC---CCeEEEE-e--CCCc
Q 017194 57 GNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLE----SYNYNKEEINQIVCNPK---SSFLACA-D--DGGD 126 (375)
Q Consensus 57 ~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~-~--~dg~ 126 (375)
.-.....|+|.|+|+.+++--..|.|++++..+++. ..+. ...........++++|+ +..|++. + .++.
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~-~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK-TELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcE-eeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 345678999999998666655589999998665432 2221 11223567889999995 4455443 2 3445
Q ss_pred EEEEeCcCc----------ee-eeeEecCcccceeEEEEeeCCCcEEEEee
Q 017194 127 VKIIDIRQH----------CL-YKSLRAGHSSICSSVQFIPWKPWEVISGG 166 (375)
Q Consensus 127 i~iwd~~~~----------~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 166 (375)
|.-|.+..+ +. +..+..........|.|.|+|. ++++.+
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~G 158 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTG 158 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECB
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEEC
Confidence 666655431 11 1122211122356799999997 666654
No 335
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.00 E-value=0.16 Score=49.53 Aligned_cols=201 Identities=13% Similarity=0.174 Sum_probs=119.2
Q ss_pred EEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccC
Q 017194 22 IASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNY 101 (375)
Q Consensus 22 ~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 101 (375)
-.+|. .+.+|--. ..++.|+|+++...++...- ..+|.-=.|-.+. .|+..+ +..|+-|++... ..+.+.+..
T Consensus 72 IMnP~-~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~--s~P~k~fdR 144 (1630)
T 1xi4_A 72 IMNPA-SKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGE--SQPVKMFDR 144 (1630)
T ss_pred ccCCC-cceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCC-eeEEEc-CCeEEEeccCCC--CccHHHHhc
Confidence 45666 56666554 67899999998887777664 4466666675433 454444 678999999742 244444443
Q ss_pred C----CcceeEEEEcCCCCeEEEEe-------CCCcEEEEeCcCceeeeeEecCcccceeEEEEee--CCCcEEEEeec-
Q 017194 102 N----KEEINQIVCNPKSSFLACAD-------DGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIP--WKPWEVISGGL- 167 (375)
Q Consensus 102 ~----~~~v~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~- 167 (375)
| ...|..-..+++.++++..+ ..|.+.+|..+.+ .-+.+. ||......+.... ....++..+..
T Consensus 145 ~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~ie-gha~~F~~~~~~~~~~~~~l~~f~~~~ 222 (1630)
T 1xi4_A 145 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIE-GHAASFAQFKMEGNAEESTLFCFAVRG 222 (1630)
T ss_pred chhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhh-HhHhhhheeccCCCCCCceEEEEEEec
Confidence 3 45677788889999876543 3578899987643 334455 6655443333321 11112222221
Q ss_pred --CCeEEEeeCCCC---Ccce---EEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCC
Q 017194 168 --DSKLVMWDFSKG---RPNK---IVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIES 239 (375)
Q Consensus 168 --d~~i~~wd~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 239 (375)
.+++.+-++... .+.. ......|+ -.......++.+++ ....+..-+.-|.|++||+.+
T Consensus 223 ~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~-------~~~~Dfpv~~~vs~------k~g~iy~itk~G~~~~~d~~t 289 (1630)
T 1xi4_A 223 QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP-------EAQNDFPVAMQISE------KHDVVFLITKYGYIHLYDLET 289 (1630)
T ss_pred CCCceEEEEecCCCccCCCCCccccccccCCc-------ccccCcceEEEecc------ccCEEEEEecCceEEEEeccc
Confidence 257777777442 1100 00000000 00123455677777 677888889999999999999
Q ss_pred cceee
Q 017194 240 ELNIS 244 (375)
Q Consensus 240 ~~~~~ 244 (375)
+..++
T Consensus 290 ~~~i~ 294 (1630)
T 1xi4_A 290 GTCIY 294 (1630)
T ss_pred chhhh
Confidence 75544
No 336
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.99 E-value=0.11 Score=43.19 Aligned_cols=93 Identities=9% Similarity=0.052 Sum_probs=46.1
Q ss_pred CCEEEEeCCC-CcEEEEeccc--Cce--eeEee-ecCccEEEEEEeCCCCeEEEEcC-C---------CeEEEEECCCCC
Q 017194 28 PGFVASSGED-GCICWFDLRS--KDV--QLVTD-VGNGPVTSLCFKSGNEDIIYVSS-G---------KEVKSFDVHMPA 91 (375)
Q Consensus 28 ~~~l~s~~~d-~~i~iw~~~~--~~~--~~~~~-~~~~~v~~l~~~~~~~~l~~~~~-d---------~~i~iwd~~~~~ 91 (375)
+.+++.|+.+ ..+.++|+.+ .+- +..+. ...... +++. -+++.++.|+. + ..+.+||+.+.+
T Consensus 20 ~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 20 DTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQA-TSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSC-EEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccc-eEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 6677777643 4688888864 221 22222 111111 2222 25666677665 2 468899988643
Q ss_pred cccccccccCCCcceeEEEEcCCCCeEEEEeCC
Q 017194 92 SWRPLESYNYNKEEINQIVCNPKSSFLACADDG 124 (375)
Q Consensus 92 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 124 (375)
+..+..... .......+...+++.++.|+.+
T Consensus 98 -W~~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 98 -WVKLMSHAP-MGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp -EEECSCCCS-SCCSSEEEEEETTEEEEEECCC
T ss_pred -EEECCCCCC-cccccceEEEECCEEEEEeCcC
Confidence 444333320 1111111122467777777754
No 337
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.97 E-value=0.073 Score=40.22 Aligned_cols=107 Identities=8% Similarity=-0.046 Sum_probs=63.0
Q ss_pred cceeEEEEcCCCCeEEEEeCCCcEEEEeCcCcee------eeeEec-CcccceeEEEEeeCCCcEEEEeecCCeEEEeeC
Q 017194 104 EEINQIVCNPKSSFLACADDGGDVKIIDIRQHCL------YKSLRA-GHSSICSSVQFIPWKPWEVISGGLDSKLVMWDF 176 (375)
Q Consensus 104 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~------~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~ 176 (375)
..+..++|+|++.+.++ .+|.++-.+..+... -..+-. +-. ...++.|.|+|. +.++ .||.|+-++.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~-LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGY-LYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSC-EEEE--ETTEEEEESC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCC-EEEe--CCCEEEEeCC
Confidence 36789999999986666 678777777644221 111210 111 247899999996 4555 6699988875
Q ss_pred CCCCcceEEecCCCCCCCCCCcccC---CCceeEEeecCCccccCCCCEEEEEecCCcEE
Q 017194 177 SKGRPNKIVNFGLPENNGNAGQCYN---PAFVHAIAIPDADMLDKTNKICVVAKGDGVVD 233 (375)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 233 (375)
.+...-.-+... .... =..+..|.+.| +|.+.++. |+.++
T Consensus 115 P~~~~~~Wl~~a---------~~vg~~gw~~~~~lff~p------~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 115 PQSDTDNWIARA---------TEVGSGGWSGFKFLFFHP------NGYLYAVH--GQQFY 157 (236)
T ss_dssp CCSTTCCHHHHS---------EEEECSSGGGEEEEEECT------TSCEEEEE--TTEEE
T ss_pred CcCCCCceeccc---------cEeccCCCCceEEEEECC------CceEEEEe--CCcEE
Confidence 432211100000 0000 13568899988 78887777 77654
No 338
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.78 E-value=0.13 Score=42.05 Aligned_cols=113 Identities=12% Similarity=0.060 Sum_probs=68.7
Q ss_pred CeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEE--cCCCCeEEEE--eCCCcEEEEeCcCceeeeeEecCcc
Q 017194 71 EDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVC--NPKSSFLACA--DDGGDVKIIDIRQHCLYKSLRAGHS 146 (375)
Q Consensus 71 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~ 146 (375)
..++.++.||.|.-.|.++++..-.+..- ...++....- .+.+..++.+ +.||.|..++..+|.....+. . .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~--~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~-~-~ 86 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE--NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLS-I-R 86 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG--GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEE-H-H
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC--ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeec-c-c
Confidence 36778888999999998887654443321 0112211110 0112234443 589999999998885554443 1 1
Q ss_pred ccee--EEEEe-----------eCCCcEEEEeecCCeEEEeeCCCCCcceEEecC
Q 017194 147 SICS--SVQFI-----------PWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFG 188 (375)
Q Consensus 147 ~~v~--~~~~~-----------~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 188 (375)
..+. .+... ..+. .+++|+.+|++...|+++|+.+..+..+
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~~~g-~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIVEDE-KVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp HHHTTCSEEEECC----------CCE-EEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred cceeccccccCCCceeecccccccCC-EEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 1110 01111 0233 6899999999999999999999998755
No 339
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.40 E-value=0.4 Score=41.25 Aligned_cols=106 Identities=6% Similarity=0.041 Sum_probs=61.6
Q ss_pred ccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCccccccccc------CCCcceeEEEEcCC---CCeEEEEeC------
Q 017194 59 GPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYN------YNKEEINQIVCNPK---SSFLACADD------ 123 (375)
Q Consensus 59 ~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~------~~~~~v~~~~~~~~---~~~l~~~~~------ 123 (375)
.....|+|.|+|+.+++-...+.|++++..+++. ..+..+. .....+..++|+|+ +..|++...
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~-~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSV-KTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcE-eEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 4567999999998776655445788887654432 2222111 12456789999995 555555442
Q ss_pred -------CCcEEEEeCcCc-------eee-eeEecCcccceeEEEEeeCCCcEEEEee
Q 017194 124 -------GGDVKIIDIRQH-------CLY-KSLRAGHSSICSSVQFIPWKPWEVISGG 166 (375)
Q Consensus 124 -------dg~i~iwd~~~~-------~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 166 (375)
...|.-++.... +.+ ..+..........|+|.|+|. ++++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEEC
Confidence 134555654321 111 122211123468999999997 555544
No 340
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.27 E-value=0.63 Score=42.64 Aligned_cols=150 Identities=13% Similarity=0.208 Sum_probs=82.5
Q ss_pred CCEEEEeCCC----CcEEEEecccCceeeEe-e-----e-cCccEEEEEEeC-CCCeEEEEcCC------CeEEEEECCC
Q 017194 28 PGFVASSGED----GCICWFDLRSKDVQLVT-D-----V-GNGPVTSLCFKS-GNEDIIYVSSG------KEVKSFDVHM 89 (375)
Q Consensus 28 ~~~l~s~~~d----~~i~iw~~~~~~~~~~~-~-----~-~~~~v~~l~~~~-~~~~l~~~~~d------~~i~iwd~~~ 89 (375)
+.+++.||.+ ..+.+||..+++-...- . . ....-.+++..+ +++.++.|+.+ +.+.+||..+
T Consensus 398 ~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t 477 (695)
T 2zwa_A 398 NDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKT 477 (695)
T ss_dssp SCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTT
T ss_pred CEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCC
Confidence 6777778753 46888888776543222 1 0 111112333333 67777777653 3588899886
Q ss_pred CCcccccccccCCCcceeEEEEcCCCCeEEEEeCCC--cEEEEeCcCceeeee-----EecCcccceeEEEEeeCCCcEE
Q 017194 90 PASWRPLESYNYNKEEINQIVCNPKSSFLACADDGG--DVKIIDIRQHCLYKS-----LRAGHSSICSSVQFIPWKPWEV 162 (375)
Q Consensus 90 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~l 162 (375)
. .+..+...... ..-.+++...+++.++.|+.++ .+.+||+.+.+-... +. .......++.+..+...++
T Consensus 478 ~-~W~~~~~~p~~-R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p-~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 478 R-EWSMIKSLSHT-RFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFF-QNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp T-EEEECCCCSBC-CBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGG-GSCCBSCEEEEETTTTEEE
T ss_pred C-cEEECCCCCCC-cccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCC-CcccceeEEEEeCCCCEEE
Confidence 4 24444333211 1112233324777888887544 699999887642211 11 1122223355555523377
Q ss_pred EEeec--C-----CeEEEeeCCCCC
Q 017194 163 ISGGL--D-----SKLVMWDFSKGR 180 (375)
Q Consensus 163 ~~~~~--d-----~~i~~wd~~~~~ 180 (375)
+.|+. + ..+..||+.+.+
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EECCcCCCCCeeeCcEEEEEccCCc
Confidence 77765 2 468899998776
No 341
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.87 E-value=1.1 Score=41.51 Aligned_cols=319 Identities=10% Similarity=0.019 Sum_probs=156.8
Q ss_pred ceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCccccc
Q 017194 17 TATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPL 96 (375)
Q Consensus 17 ~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 96 (375)
.|.++...++ +..|..|.. +-+..++..+++...........|.++....+|... .|+. +-+.+++..+++. ..+
T Consensus 192 ~i~~i~~d~~-~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-igT~-~Gl~~~~~~~~~~-~~~ 266 (758)
T 3ott_A 192 FVNSLLEDTT-RQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLL-AGTD-NGLYVYHNDTTPL-QHI 266 (758)
T ss_dssp CEEEEEEETT-TTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEE-EEET-TEEEEECCTTSCC-EEE
T ss_pred eeEEEEEECC-CCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEE-EEeC-CceeEEecCCCcE-EEE
Confidence 3778877766 454444443 347788877665322212224568888887777644 4554 4578888765432 111
Q ss_pred cc-----ccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEe------cCcccceeEEEEeeCCCcEEEEe
Q 017194 97 ES-----YNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLR------AGHSSICSSVQFIPWKPWEVISG 165 (375)
Q Consensus 97 ~~-----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~l~~~ 165 (375)
.. .......|.++....++. |..|+..| +.++... . ....+. ......|.++.-..+|. |..|
T Consensus 267 ~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~G-l~~~~~~-~-~~~~~~~~~~~~~~~~~~v~~i~~D~~g~--lWiG 340 (758)
T 3ott_A 267 IHDSRNIQSLTNNIIWNIFADQEHN-IWLGTDYG-ISLSRYN-S-ALQFIPISQITGTGDGNQFYSLFRDSKGF--YWFG 340 (758)
T ss_dssp CCCTTCTTSCSCSCEEEEEECTTCC-EEEEESSS-EEEECCC-C--CEEEEHHHHSCSCCCCBEEEEEECTTCC--EEEE
T ss_pred EcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeCCc-ccccccC-C-ceeEEecccCCCCCCCceEEEEEEcCCCC--EEEe
Confidence 11 011234688888877775 45555556 5544322 1 111111 01134688887777775 6666
Q ss_pred ecCCeEEEeeCCCCC--cceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCccee
Q 017194 166 GLDSKLVMWDFSKGR--PNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNI 243 (375)
Q Consensus 166 ~~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 243 (375)
+.+| +..++..+++ ....+.... .........|.++.-.+ +++ |..|+ ++-|..||..+++..
T Consensus 341 t~~G-l~~~~~~~~~~~~~~~~~~~~------~~~~l~~~~v~~i~~d~------~g~-lWigt-~~GL~~~~~~~~~~~ 405 (758)
T 3ott_A 341 GANG-LIRFTDPAGERHDAIWYRMGD------KTYPLSHNRIRHIYEDK------EQQ-LWIAT-DGSINRYDYATRQFI 405 (758)
T ss_dssp ETTE-EEEESCTTSSCCCCEEECTTC------SSSCCSCSCEEEEEECT------TSC-EEEEE-TTEEEEEETTTTEEE
T ss_pred eCCc-ceeecccccccceeEEeccCC------cCCCCCCCceEEEEECC------CCC-EEEEe-CCcHhhcCcCCCcEE
Confidence 6554 6667655432 122222110 00011234577877765 455 44455 457999998875433
Q ss_pred eccc-cc----CCCCCCceeeccccccee-ee-eeeecCCcce------eEee--eee---cC-CCccEEEEEEeecCCC
Q 017194 244 SRSK-ST----TKPLKGSQSTSKVNIRDA-EM-EILDQSGGKR------LHLD--YSV---GG-HTAAASCVAFSMFGER 304 (375)
Q Consensus 244 ~~~~-~~----~~~~~~~~~~s~~g~~~~-~~-~~~~~~~~~~------~~~~--~~~---~~-~~~~v~~~~~s~~~~~ 304 (375)
.... .. ....+.++...++|...+ +. +.....+... .... ..+ .+ ....|.++... ++
T Consensus 406 ~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d---~~ 482 (758)
T 3ott_A 406 HYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPD---NE 482 (758)
T ss_dssp EEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEEC---TT
T ss_pred EeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEc---CC
Confidence 2211 11 111233344445555433 21 1111111110 0110 011 11 12358888887 78
Q ss_pred CcEEEEecCCCeEEEEeCCCceeeeecchhhhhhhhcccccceeeeeecCCCCCcEEEeeCCCeEEEEe
Q 017194 305 GKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYS 373 (375)
Q Consensus 305 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw~ 373 (375)
|.+.+.++..+-|..+|..+.+...-. .........+.++.... +|.+.+. +..| |..++
T Consensus 483 g~lWi~~~t~~Gl~~~d~~~~~~~~~~------~~~~~~~~~~~~i~~d~-~g~lWig-t~~G-l~~~~ 542 (758)
T 3ott_A 483 GNVWVLLYNNKGIDKINPRTREVTKLF------ADELTGEKSPNYLLCDE-DGLLWVG-FHGG-VMRIN 542 (758)
T ss_dssp SCEEEEETTCSSEEEEETTTTEEEEEC------TTTSCGGGCEEEEEECT-TSCEEEE-ETTE-EEEEC
T ss_pred CCEEEEccCCCCcEEEeCCCCceEEec------CCCcCCCcccceEEECC-CCCEEEE-ecCc-eEEEe
Confidence 887663333345888898776432100 00011124566666655 6654443 4444 55554
No 342
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.69 E-value=0.98 Score=41.37 Aligned_cols=109 Identities=10% Similarity=0.170 Sum_probs=56.9
Q ss_pred CCCCeEEEEeCC----CcEEEEeCcCceeeeeE-e-----cCcccceeEEEEee-CCCcEEEEeecCC------eEEEee
Q 017194 113 PKSSFLACADDG----GDVKIIDIRQHCLYKSL-R-----AGHSSICSSVQFIP-WKPWEVISGGLDS------KLVMWD 175 (375)
Q Consensus 113 ~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~-~-----~~~~~~v~~~~~~~-~~~~~l~~~~~d~------~i~~wd 175 (375)
.++..++.|+.+ ..+.+||+.+++-...- . ......-.+++..+ ++. +++.|+.++ .+.+||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~-lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQ-LLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTE-EEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCE-EEEEcCCCCCCCccccEEEEe
Confidence 456677777643 46888998766432211 0 00111112333343 555 777777543 577888
Q ss_pred CCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCC--cEEEEeCCCc
Q 017194 176 FSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDG--VVDVINIESE 240 (375)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~ 240 (375)
..+.+-...-... .+..-.+.+... ++++++.|+.++ .+.+||..+.
T Consensus 475 ~~t~~W~~~~~~p------------~~R~~h~~~~~~------~~~iyv~GG~~~~~~v~~yd~~t~ 523 (695)
T 2zwa_A 475 MKTREWSMIKSLS------------HTRFRHSACSLP------DGNVLILGGVTEGPAMLLYNVTEE 523 (695)
T ss_dssp TTTTEEEECCCCS------------BCCBSCEEEECT------TSCEEEECCBCSSCSEEEEETTTT
T ss_pred CCCCcEEECCCCC------------CCcccceEEEEc------CCEEEEECCCCCCCCEEEEECCCC
Confidence 8765322211111 011122333322 588888887654 6888998864
No 343
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.61 E-value=0.44 Score=41.55 Aligned_cols=107 Identities=10% Similarity=0.029 Sum_probs=70.2
Q ss_pred ceeEEEEcCCCCeEEEEe-CCCcEEEEeCcCc------ee-------eeeEecCcccceeEEEEeeCCCcEEEEeecCCe
Q 017194 105 EINQIVCNPKSSFLACAD-DGGDVKIIDIRQH------CL-------YKSLRAGHSSICSSVQFIPWKPWEVISGGLDSK 170 (375)
Q Consensus 105 ~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~------~~-------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 170 (375)
....+..+|||+++++++ .+.++.++|++.- +. ..... -.......+|.++|. ...+-.-|..
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e--~GlGPlHt~Fd~~G~-aYTtlfidSq 400 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE--LGLGPLHTTFDGRGN-AYTTLFIDSQ 400 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB--CCSCEEEEEECSSSE-EEEEETTTTE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc--CCCcccEEEECCCCc-eEeeeeecce
Confidence 345688999999988776 5778999998742 11 12222 234567889999984 6677778999
Q ss_pred EEEeeCCCC----------CcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEec
Q 017194 171 LVMWDFSKG----------RPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKG 228 (375)
Q Consensus 171 i~~wd~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~ 228 (375)
|..|++... ..+..+..+ ..+-.+..+......++|++|++...
T Consensus 401 vvkWni~~a~~~~~g~~~~~v~~k~dv~--------------YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 401 VVKWNMEEAVRAYKGEKVNYIKQKLDVH--------------YQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEEEEHHHHHHHHTTCCCCCEEEEEECS--------------SCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred EEEEeccHHHHHhcCccCCeeeeccccc--------------cCCcccccCCCccCCCCccEEEEecc
Confidence 999999642 233344433 33444444433344568999988763
No 344
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=95.49 E-value=0.82 Score=37.26 Aligned_cols=197 Identities=13% Similarity=0.116 Sum_probs=106.5
Q ss_pred CCEEEEeCCCCcEEEEecccCce-------eeEee-ecCccEEEEEEeCCCCeEEEEcCCCeEEEEE---CCCCC---cc
Q 017194 28 PGFVASSGEDGCICWFDLRSKDV-------QLVTD-VGNGPVTSLCFKSGNEDIIYVSSGKEVKSFD---VHMPA---SW 93 (375)
Q Consensus 28 ~~~l~s~~~d~~i~iw~~~~~~~-------~~~~~-~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd---~~~~~---~~ 93 (375)
...+++.+.+|.|+--.+.+.+. ...+. ...+.+..+........|+..+..|.++-.. +.... ..
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G 82 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARG 82 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCC
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCC
Confidence 35778888888888766443211 11111 1234555555555556677677777655444 43221 11
Q ss_pred cc---cccccCCCcceeEEE-EcC--CCCeEEEEeCCCcEEEEeCcCc-------eeeeeEecCcccceeEEEEeeCCCc
Q 017194 94 RP---LESYNYNKEEINQIV-CNP--KSSFLACADDGGDVKIIDIRQH-------CLYKSLRAGHSSICSSVQFIPWKPW 160 (375)
Q Consensus 94 ~~---~~~~~~~~~~v~~~~-~~~--~~~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~ 160 (375)
.+ +-.+.. ...|..+. ..+ +..+++..+.+|.++...+... .....++ . ...+..+.......
T Consensus 83 ~~i~~~l~l~~-~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lk-e-~D~lv~~~~~~~~d- 158 (327)
T 3uc1_A 83 QHVANLLAFQP-EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLR-D-NDELVGAVLCSAGD- 158 (327)
T ss_dssp EEHHHHTTCCT-TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCC-T-TCCEEEEEEECTTC-
T ss_pred EEHHHccCCCC-CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEEC-C-CCEEEEEEEecCCC-
Confidence 11 112222 34555544 332 5778999999999999887642 2222344 2 34555555555555
Q ss_pred EEEEeecCCeEEEeeCC--CCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCC
Q 017194 161 EVISGGLDSKLVMWDFS--KGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIE 238 (375)
Q Consensus 161 ~l~~~~~d~~i~~wd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 238 (375)
.++..+..|.+..+... .-.....-..+.+ .-.+.....|.++...+ ++..++..+..|.++.-.+.
T Consensus 159 ~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~-----~i~L~~~d~Vv~~~~~~------~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 159 DLLLVSANGQSIRFSATDEALRPMGRATSGVQ-----GMRFNIDDRLLSLNVVR------EGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp EEEEEETTSEEEEEECCTTTSCCCCTTSBCEE-----SSCCCTTCCEEEEEECC------TTCEEEEEETTSEEEEEEGG
T ss_pred EEEEEECCCeEEEEECcccccCcCCcCCCCee-----eecCCCCCEEEEEEEEC------CCCEEEEEeCCCcEEEEEHH
Confidence 58888889998888766 2111100000000 00001234566655544 46688888899988887765
Q ss_pred C
Q 017194 239 S 239 (375)
Q Consensus 239 ~ 239 (375)
.
T Consensus 228 e 228 (327)
T 3uc1_A 228 E 228 (327)
T ss_dssp G
T ss_pred H
Confidence 4
No 345
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.09 E-value=1.1 Score=36.19 Aligned_cols=138 Identities=11% Similarity=0.120 Sum_probs=78.2
Q ss_pred ecCCCCEEEEeC--CCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCC--------------CeEEEEEC
Q 017194 24 SRDRPGFVASSG--EDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSG--------------KEVKSFDV 87 (375)
Q Consensus 24 ~~~~~~~l~s~~--~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d--------------~~i~iwd~ 87 (375)
+++ +.+|+-.. .++.|...+.+... ...+... . +--++++++.|+.+... ..|+..++
T Consensus 22 ~~~-g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~--~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 22 CES-DGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND--T--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EEE-TTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE--E--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EEe-CCEEEEEeCCCCceEEEEcCCCCC-CEEccCC--c--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 344 44544432 24556666654333 4444321 2 33557889988877643 36777777
Q ss_pred CCCCcccccccccCCCcceeEEEEcCCCCeEEEEe----CCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEE
Q 017194 88 HMPASWRPLESYNYNKEEINQIVCNPKSSFLACAD----DGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVI 163 (375)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 163 (375)
...+. ..+.. .. ...|++++++|+-.. .+..|+..++.. .....+. .+.. ..+++++++++.
T Consensus 96 dg~~~-~~l~~-----~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt-~~~~----~~~~~~g~~iy~ 161 (302)
T 3s25_A 96 NGHGS-TVLDP-----DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDG-EEKKKIK-NHYL----FTCNTSDRYFYY 161 (302)
T ss_dssp TSCCC-EEEEC-----SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTS-CCCEEEE-SSCC----CCSEEETTEEEE
T ss_pred CCCcc-eEeec-----CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCC-CCeEEEe-CCCc----eEeeEECCEEEE
Confidence 75432 22222 11 236777888888765 344566666653 3344554 3332 456788886555
Q ss_pred EeecCCeEEEeeCCCCCc
Q 017194 164 SGGLDSKLVMWDFSKGRP 181 (375)
Q Consensus 164 ~~~~d~~i~~wd~~~~~~ 181 (375)
+.....+|...++..+..
T Consensus 162 t~~g~~~Iy~~~l~g~~~ 179 (302)
T 3s25_A 162 NNPKNGQLYRYDTASQSE 179 (302)
T ss_dssp ECTTTCCEEEEETTTTEE
T ss_pred EeCCCceEEEEECCCCCE
Confidence 655567888888875543
No 346
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.96 E-value=2.3 Score=39.41 Aligned_cols=193 Identities=9% Similarity=0.097 Sum_probs=109.5
Q ss_pred CceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCcccc
Q 017194 16 ATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRP 95 (375)
Q Consensus 16 ~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 95 (375)
..|.++....+ + .|..|..+| +..||..+.+...........|.++.. .++ .|..++.+ -+..+|..+++. ..
T Consensus 63 ~~i~~i~~d~~-g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~-~~ 135 (758)
T 3ott_A 63 TRIYCGVIIDN-T-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKL-TS 135 (758)
T ss_dssp SCEEEEEEETT-T-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCE-EE
T ss_pred ceEEEEEEcCC-C-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeE-EE
Confidence 45888777765 4 455566665 788998776432211112335777654 355 45556655 688889875432 22
Q ss_pred ccc--ccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEec-C----cccceeEEEEeeCCCcEEEEeecC
Q 017194 96 LES--YNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRA-G----HSSICSSVQFIPWKPWEVISGGLD 168 (375)
Q Consensus 96 ~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~----~~~~v~~~~~~~~~~~~l~~~~~d 168 (375)
+.. .......|.++....++.+.+ ++.+ -+..++..+++.. .+.. . ....|.++...+++. .|..|+.
T Consensus 136 ~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~-~lWigt~- 210 (758)
T 3ott_A 136 FDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQ-CVWIGTE- 210 (758)
T ss_dssp ECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTT-EEEEEEE-
T ss_pred eccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceE-EecCCCccccccceeEEEEEECCCC-EEEEEEC-
Confidence 210 011234688888777776544 5554 4778887765532 2210 1 122478887777665 4555664
Q ss_pred CeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcc
Q 017194 169 SKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESEL 241 (375)
Q Consensus 169 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 241 (375)
+-+..+|..+++........ ...|.++...+ ++. |.+|+. +-+.+++..+..
T Consensus 211 ~Gl~~~~~~~~~~~~~~~l~-------------~~~i~~i~~d~------~g~-lWigT~-~Gl~~~~~~~~~ 262 (758)
T 3ott_A 211 GYLFQYFPSTGQIKQTEAFH-------------NNSIKSLALDG------NGD-LLAGTD-NGLYVYHNDTTP 262 (758)
T ss_dssp EEEEEEETTTTEEEEEEEEE-------------EEEEEEEEECT------TCC-EEEEET-TEEEEECCTTSC
T ss_pred CCCeEEcCCCCeEEeccCCC-------------CCeEEEEEEcC------CCC-EEEEeC-CceeEEecCCCc
Confidence 45888997765432211111 24577777765 455 444554 458888887643
No 347
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.87 E-value=1.8 Score=37.86 Aligned_cols=94 Identities=13% Similarity=0.126 Sum_probs=59.5
Q ss_pred EEEEcCCCeEEEEECCCCCcccccccccCC----------------------Cccee--EEEEcC---CCCeEEEEe-CC
Q 017194 73 IIYVSSGKEVKSFDVHMPASWRPLESYNYN----------------------KEEIN--QIVCNP---KSSFLACAD-DG 124 (375)
Q Consensus 73 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~----------------------~~~v~--~~~~~~---~~~~l~~~~-~d 124 (375)
+.+|+..|.|+|+-+.+++.+..+..+... .+... .+++.. ||++|+.-. .+
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 677888899999999887766655544310 01111 233322 677888776 45
Q ss_pred CcEEEEeCcCceeeeeEecCcccceeEEEEe--eCCCcEEEEeec
Q 017194 125 GDVKIIDIRQHCLYKSLRAGHSSICSSVQFI--PWKPWEVISGGL 167 (375)
Q Consensus 125 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~l~~~~~ 167 (375)
..|-..+++..++-+.+.......+-.++|- |+.. +++.+++
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~-yv~~~~e 196 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTK-YVFANAE 196 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCC-EEEEEEC
T ss_pred cceEEEECCcEeeceeEeCCCCcCcccccccccCCcc-EEEecce
Confidence 6688888887776555553455677788876 6666 4665554
No 348
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.81 E-value=1.7 Score=37.32 Aligned_cols=112 Identities=11% Similarity=0.120 Sum_probs=63.2
Q ss_pred eeecCCCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceee--Eeee------cCccEEEEEEeCC---CCeEEEEcC
Q 017194 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQL--VTDV------GNGPVTSLCFKSG---NEDIIYVSS 78 (375)
Q Consensus 10 ~l~~h~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~--~~~~------~~~~v~~l~~~~~---~~~l~~~~~ 78 (375)
.+...-..-+.|+|.|+ ++++++-...+.|++++..+++... .+.. .......|+|+|+ +..|..+..
T Consensus 21 ~~a~~l~~P~~~a~~pd-G~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s 99 (454)
T 1cru_A 21 VILSNLNKPHALLWGPD-NQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGT 99 (454)
T ss_dssp EEECCCSSEEEEEECTT-SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEE
T ss_pred EEECCCCCceEEEEcCC-CcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEe
Confidence 34333345678999999 7877766554578888765554322 2211 2456779999995 444444332
Q ss_pred -------------CCeEEEEECCCCC-c---cc-cccccc-CCCcceeEEEEcCCCCeEEEEe
Q 017194 79 -------------GKEVKSFDVHMPA-S---WR-PLESYN-YNKEEINQIVCNPKSSFLACAD 122 (375)
Q Consensus 79 -------------d~~i~iwd~~~~~-~---~~-~~~~~~-~~~~~v~~~~~~~~~~~l~~~~ 122 (375)
...|.-+++..+. . .+ .+..+. ........++|.|||.+.++.+
T Consensus 100 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 100 FKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 1355556553221 0 11 111121 1123468899999998766654
No 349
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=93.42 E-value=3.1 Score=34.93 Aligned_cols=156 Identities=14% Similarity=0.069 Sum_probs=76.4
Q ss_pred CCceeEEEEecCCCCEEEEeCCCC----cEEEEecccCceeeEeee--------------cCccEEEEEEeCC--CCeEE
Q 017194 15 KATATCCIASRDRPGFVASSGEDG----CICWFDLRSKDVQLVTDV--------------GNGPVTSLCFKSG--NEDII 74 (375)
Q Consensus 15 ~~~i~~~~~~~~~~~~l~s~~~d~----~i~iw~~~~~~~~~~~~~--------------~~~~v~~l~~~~~--~~~l~ 74 (375)
...|.+|++.|.+...|..+...| .|... ...++.-..+.. ....|.++++.|. ...+.
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 356999999983234444444444 33332 222322111110 1125778888862 45566
Q ss_pred EEcCCCeEEEEECCCCCccccccccc----------------CCCcceeEEEEcCC-CCeEEEEeCCCcEEEEeCcCcee
Q 017194 75 YVSSGKEVKSFDVHMPASWRPLESYN----------------YNKEEINQIVCNPK-SSFLACADDGGDVKIIDIRQHCL 137 (375)
Q Consensus 75 ~~~~d~~i~iwd~~~~~~~~~~~~~~----------------~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~ 137 (375)
+++..+.|...+ ..++.++.+.... .....+.++.+.|. ...|+++..++.|...+ +.++.
T Consensus 133 ~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~t 210 (394)
T 3b7f_A 133 AGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTD 210 (394)
T ss_dssp EEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSS
T ss_pred EEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCC
Confidence 666556554443 2234444433211 11245788999883 44555555445454433 22322
Q ss_pred eeeEecC----c--------ccceeEEEEeeCCCcEEEEeecCCeEEEe
Q 017194 138 YKSLRAG----H--------SSICSSVQFIPWKPWEVISGGLDSKLVMW 174 (375)
Q Consensus 138 ~~~~~~~----~--------~~~v~~~~~~~~~~~~l~~~~~d~~i~~w 174 (375)
-..+... + ...+.++.+.|.....+..+...+ |...
T Consensus 211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s 258 (394)
T 3b7f_A 211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRM 258 (394)
T ss_dssp CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEE
T ss_pred ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEe
Confidence 2222100 0 124788999987433566666544 4443
No 350
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=93.08 E-value=2.9 Score=33.65 Aligned_cols=141 Identities=10% Similarity=0.135 Sum_probs=79.5
Q ss_pred EEEecCCCCEEEEeCCC--------------CcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEc--C--CCeE
Q 017194 21 CIASRDRPGFVASSGED--------------GCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVS--S--GKEV 82 (375)
Q Consensus 21 ~~~~~~~~~~l~s~~~d--------------~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~--~--d~~i 82 (375)
--++++ +.+|+-+... ..|+..++..++. ..+.. .. +..|+++++.|+... . ...|
T Consensus 58 ~~i~~~-g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~-~~l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 58 MYINAD-KNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS-TVLDP--DP--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEEC-SSEEEEEEECC------CCSSCCSEEEEEEETTSCCC-EEEEC--SC--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eeEEEc-CCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc-eEeec--CC--ccEEEEeCCEEEEEeecCCCCceE
Confidence 356787 6776655432 3577777776653 33321 22 236778888888775 2 3456
Q ss_pred EEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEEeC-CCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcE
Q 017194 83 KSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADD-GGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWE 161 (375)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 161 (375)
+.-++... ..+.+.. + .+ ..++++++.|+-.+. ...|.+.++..+.....+. + ... ..+.|+++++
T Consensus 132 y~~~~dGs-~~~~lt~---~--~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~-~---~~~-~~~~P~g~~i 198 (302)
T 3s25_A 132 YRIRIDGE-EKKKIKN---H--YL--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD-C---NCY-KPVVLDDTNV 198 (302)
T ss_dssp EEEETTSC-CCEEEES---S--CC--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC-S---CEE-EEEEEETTEE
T ss_pred EEEECCCC-CeEEEeC---C--Cc--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC-C---Ccc-ceeeecCCEE
Confidence 66666532 2222222 1 12 346778888886665 6788888887665443333 2 122 3466888854
Q ss_pred EEEeecC-CeEEEeeCCCCC
Q 017194 162 VISGGLD-SKLVMWDFSKGR 180 (375)
Q Consensus 162 l~~~~~d-~~i~~wd~~~~~ 180 (375)
+.+-..+ ..|..-++....
T Consensus 199 y~t~~~~~~~I~~~~ldG~~ 218 (302)
T 3s25_A 199 YYMDVNRDNAIVHVNINNPN 218 (302)
T ss_dssp EEEEGGGTTEEEEECSSSCC
T ss_pred EEEEcCCCcEEEEEECCCCC
Confidence 4444333 356666665443
No 351
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.00 E-value=2.8 Score=33.31 Aligned_cols=183 Identities=8% Similarity=-0.038 Sum_probs=97.0
Q ss_pred ceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCccccc
Q 017194 17 TATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPL 96 (375)
Q Consensus 17 ~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 96 (375)
.|..++.... ..++. . ||.|..|-......+..-......|..++-...- .++. . ||.|+.|-......+..-
T Consensus 25 ~i~~ia~G~~--h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SCCEEEECSS--EEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCC
T ss_pred CCcEEEeCCC--eEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCC
Confidence 5666766533 23333 4 8889998765433222111123356666654332 2333 4 899999986643222211
Q ss_pred ccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeC
Q 017194 97 ESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDF 176 (375)
Q Consensus 97 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~ 176 (375)
... ...|..++...+ ..+.-. +|.|+.|-....-.+..-. .....|..++..... .+.-. ||.|+.|-.
T Consensus 98 ~~~---~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~-~~~~~i~~i~~G~~~---~~~l~-~G~v~~wG~ 166 (282)
T 3qhy_B 98 AEA---RSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPA-EAQSGVTALDGGVYT---ALAVK-NGGVIAWGD 166 (282)
T ss_dssp GGG---SSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCG-GGGSSEEEEEECSSE---EEEEE-TTEEEEEEC
T ss_pred ccc---CCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCc-cCCCCeEEEEcccCE---EEEEE-CCEEEEecC
Confidence 111 346777776544 333334 8999999765322111111 223456666554432 22333 799999987
Q ss_pred CCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCC
Q 017194 177 SKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIES 239 (375)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 239 (375)
.....+.... . ....|..++... ...++. .+|.|..|-...
T Consensus 167 n~~gqlg~p~-~------------~~~~v~~i~~G~-------~hs~al--~~G~v~~wG~n~ 207 (282)
T 3qhy_B 167 NYFGQTTVPA-E------------AQSGVDDVAGGI-------FHSLAL--KDGKVIAWGDNR 207 (282)
T ss_dssp CTTSTTSCCG-G------------GGSSEEEEEECS-------SEEEEE--ETTEEEEEECCT
T ss_pred CCCCCCCCce-e------------cCCCeEEEEecC-------CEEEEE--ECCeEEEEECCC
Confidence 6533222100 0 124577777653 344444 599999997664
No 352
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=92.69 E-value=3.9 Score=34.24 Aligned_cols=193 Identities=9% Similarity=0.010 Sum_probs=89.2
Q ss_pred CEEEEeCCCCcEEEEeccc-CceeeEe--eecCccEEEEEEeC-CCCeEEEEcCCC----eEEEEECCCCCccccccc--
Q 017194 29 GFVASSGEDGCICWFDLRS-KDVQLVT--DVGNGPVTSLCFKS-GNEDIIYVSSGK----EVKSFDVHMPASWRPLES-- 98 (375)
Q Consensus 29 ~~l~s~~~d~~i~iw~~~~-~~~~~~~--~~~~~~v~~l~~~~-~~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~-- 98 (375)
..|..|...| +.+++... ++.-..+ ......|.+|++.| +...|.+++..+ .|... ...++.+..+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPP 100 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccc
Confidence 4566777777 55555432 2222211 12346799999998 233455554444 34332 233444443322
Q ss_pred -ccC--------CCcceeEEEEcCC--CCeEEEEeCCCcEEEEeCcCceeeeeEec------------------Ccccce
Q 017194 99 -YNY--------NKEEINQIVCNPK--SSFLACADDGGDVKIIDIRQHCLYKSLRA------------------GHSSIC 149 (375)
Q Consensus 99 -~~~--------~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------------------~~~~~v 149 (375)
+.. ....|.++++.|. ...+.++...+.|...+- .++.-..+.. .....+
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i 179 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKM 179 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCce
Confidence 111 1125778889872 456666666666655432 2222111110 012357
Q ss_pred eEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecC
Q 017194 150 SSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGD 229 (375)
Q Consensus 150 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~d 229 (375)
.+|.+.|..+..+..+..++.|...+ ..++.-..+...................+..|++.|. +...|.++...
T Consensus 180 ~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~-----~~~~l~vg~~~ 253 (394)
T 3b7f_A 180 HSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPA-----APDILYQQNHC 253 (394)
T ss_dssp EEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSS-----STTEEEEEETT
T ss_pred eEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCC-----CCCEEEEEcCC
Confidence 88999885332455555555444332 2233322222110000000000000124788888873 34667776654
Q ss_pred C
Q 017194 230 G 230 (375)
Q Consensus 230 g 230 (375)
+
T Consensus 254 g 254 (394)
T 3b7f_A 254 G 254 (394)
T ss_dssp E
T ss_pred e
Confidence 4
No 353
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=90.97 E-value=7.1 Score=33.62 Aligned_cols=107 Identities=13% Similarity=0.087 Sum_probs=57.8
Q ss_pred CceeEEEEecCCCC-EEEEeCCCCcEEEEecccCc---eeeEee---e------cCccEEEEEEeCC----CCeEEEEcC
Q 017194 16 ATATCCIASRDRPG-FVASSGEDGCICWFDLRSKD---VQLVTD---V------GNGPVTSLCFKSG----NEDIIYVSS 78 (375)
Q Consensus 16 ~~i~~~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~---~~~~~~---~------~~~~v~~l~~~~~----~~~l~~~~~ 78 (375)
..-+.|+|.|+ +. .|+.+...|.|++++..... .+..+. . .......|+|+|+ +...++-+.
T Consensus 14 ~~P~~~a~~pd-G~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSGD-GSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCSS-SSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECCC-CCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 34567999999 64 34445667999999754221 122221 0 1356788999996 433333221
Q ss_pred --C----------CeEEEEECCCC--C-----ccccccccc--CCCcceeEEEEcCCCCeEEEEeC
Q 017194 79 --G----------KEVKSFDVHMP--A-----SWRPLESYN--YNKEEINQIVCNPKSSFLACADD 123 (375)
Q Consensus 79 --d----------~~i~iwd~~~~--~-----~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~ 123 (375)
+ ..|.-|.+..+ . ..+.+.... .....-..|+|.||+.+.++.+.
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 14555666432 1 011111111 11223578999999987666554
No 354
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=90.82 E-value=7.3 Score=33.53 Aligned_cols=108 Identities=9% Similarity=0.014 Sum_probs=59.7
Q ss_pred ccEEEEEEeCCCC-eEEEEcCCCeEEEEECCCCCccccccc----cc-----CCCcceeEEEEcCC---CCeEEEE-eC-
Q 017194 59 GPVTSLCFKSGNE-DIIYVSSGKEVKSFDVHMPASWRPLES----YN-----YNKEEINQIVCNPK---SSFLACA-DD- 123 (375)
Q Consensus 59 ~~v~~l~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~----~~-----~~~~~v~~~~~~~~---~~~l~~~-~~- 123 (375)
.....|+|.|++. .|+++...|.|++++.........+.. +. ........++|+|+ +.+|++. +.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3557899999996 566667789999997542211111111 11 11456789999996 3343333 21
Q ss_pred -C----------CcEEEEeCcC----------ceeeeeEe-cCcccceeEEEEeeCCCcEEEEeec
Q 017194 124 -G----------GDVKIIDIRQ----------HCLYKSLR-AGHSSICSSVQFIPWKPWEVISGGL 167 (375)
Q Consensus 124 -d----------g~i~iwd~~~----------~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~ 167 (375)
+ ..|.-|.+.. .+.+..+. .........|+|.|||. ++++.+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCC
Confidence 1 1344455432 12222222 11123467899999997 5665554
No 355
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=90.28 E-value=5.8 Score=31.47 Aligned_cols=143 Identities=14% Similarity=0.101 Sum_probs=76.9
Q ss_pred cEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCccc-ccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceee
Q 017194 60 PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWR-PLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLY 138 (375)
Q Consensus 60 ~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 138 (375)
.|..++.... +.+... ||.|+.|-......+. +... ...|..++..... .++. . ||.|+.|-....-.+
T Consensus 25 ~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg~p~~~----~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gql 94 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLALK-GGKVLGWGANLNGQLTMPAAT----QSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQT 94 (282)
T ss_dssp SCCEEEECSS--EEEEEE-TTEEEEEECCSSSTTSCCGGG----GSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTT
T ss_pred CCcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCCCCccC----CCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCC
Confidence 5666665432 333335 8999999866432222 1111 3467777765443 3333 4 899999976532111
Q ss_pred eeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCccccC
Q 017194 139 KSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDK 218 (375)
Q Consensus 139 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 218 (375)
..-. .-...|..++.... ..+.-. +|.|+.|-......+.... . ....|..++...
T Consensus 95 g~P~-~~~~~v~~ia~G~~---hs~al~-~G~v~~wG~n~~gqlg~~~-~------------~~~~i~~i~~G~------ 150 (282)
T 3qhy_B 95 TVPA-EARSGVDAIAAGAW---ASYALK-DGKVIAWGDDSDGQTTVPA-E------------AQSGVTALDGGV------ 150 (282)
T ss_dssp CCCG-GGSSSEEEEEEETT---EEEEEE-TTEEEEEECCTTSTTSCCG-G------------GGSSEEEEEECS------
T ss_pred CCCc-ccCCCeEEEECcCC---EEEEEe-CCeEEEecCCCCCcCCCCc-c------------CCCCeEEEEccc------
Confidence 1111 12346777766554 334444 9999999866432221100 0 124567776643
Q ss_pred CCCEEEEEecCCcEEEEeCCC
Q 017194 219 TNKICVVAKGDGVVDVINIES 239 (375)
Q Consensus 219 ~~~~l~~~~~dg~i~i~d~~~ 239 (375)
...++. . ||.|..|-...
T Consensus 151 -~~~~~l-~-~G~v~~wG~n~ 168 (282)
T 3qhy_B 151 -YTALAV-K-NGGVIAWGDNY 168 (282)
T ss_dssp -SEEEEE-E-TTEEEEEECCT
T ss_pred -CEEEEE-E-CCEEEEecCCC
Confidence 233333 3 79999997764
No 356
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=89.75 E-value=12 Score=34.33 Aligned_cols=194 Identities=16% Similarity=0.075 Sum_probs=97.6
Q ss_pred EEE-EecCCCCEEEEe----CCC-CcEEEEecccCceeeE-ee-ecCc------cEEEEEEeCCCCeEEEEc--------
Q 017194 20 CCI-ASRDRPGFVASS----GED-GCICWFDLRSKDVQLV-TD-VGNG------PVTSLCFKSGNEDIIYVS-------- 77 (375)
Q Consensus 20 ~~~-~~~~~~~~l~s~----~~d-~~i~iw~~~~~~~~~~-~~-~~~~------~v~~l~~~~~~~~l~~~~-------- 77 (375)
.+. ++|+ +++++.+ |.| ..++++|+.+++.+.. +. .-+. ....++|..+. .++.+.
T Consensus 133 g~~~~~~~-~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~-~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 133 GVSNCFQN-PNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKD-TIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEECSSS-TTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETT-EEEECCCCSTTCBC
T ss_pred ceeecCCC-CCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCC-EEEEEeCCCCCCcC
Confidence 344 7888 6665533 222 4799999999886531 22 0001 11345787444 444432
Q ss_pred ---CCCeEEEEECCCCCcccccccccCCCcc-eeEEEEcCCCCe-----EEEEeC---CCcEEEEeCcC--ceeeeeEec
Q 017194 78 ---SGKEVKSFDVHMPASWRPLESYNYNKEE-INQIVCNPKSSF-----LACADD---GGDVKIIDIRQ--HCLYKSLRA 143 (375)
Q Consensus 78 ---~d~~i~iwd~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~-----l~~~~~---dg~i~iwd~~~--~~~~~~~~~ 143 (375)
....|+.|.+.+... .....+.+.... -.....++++++ +++.+. ...+.+.|... ++......
T Consensus 211 ~~~~~~~v~~~~~Gt~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 288 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESIE-KAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINM- 288 (711)
T ss_dssp TTSSBCEEEEEETTSCGG-GCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCS-
T ss_pred cCCCCCEEEEEECCCChH-HCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeec-
Confidence 124789998876532 111222222222 234455666653 343332 24466666553 33222222
Q ss_pred CcccceeEEEEeeCCCcEEEEe----------ecCCeEEEeeCCCCC-------cceE-EecCCCCCCCCCCcccCCCce
Q 017194 144 GHSSICSSVQFIPWKPWEVISG----------GLDSKLVMWDFSKGR-------PNKI-VNFGLPENNGNAGQCYNPAFV 205 (375)
Q Consensus 144 ~~~~~v~~~~~~~~~~~~l~~~----------~~d~~i~~wd~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~v 205 (375)
.... .+..+.++. +++.. ...+.|...|+.++. .... +... ....+
T Consensus 289 ~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~l 352 (711)
T 4hvt_A 289 PSDA---TLQGSFKEY-VFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPT------------ANEVF 352 (711)
T ss_dssp CTTC---EEEEEETTE-EEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCC------------TTEEE
T ss_pred CCcc---eEeeeECCE-EEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCC------------CCCeE
Confidence 1111 223445554 44422 246678888887642 1222 2211 23456
Q ss_pred eEEeecCCccccCCCCEEEEEecCCc--EEEEeCCCc
Q 017194 206 HAIAIPDADMLDKTNKICVVAKGDGV--VDVINIESE 240 (375)
Q Consensus 206 ~~~~~~~~~~~~~~~~~l~~~~~dg~--i~i~d~~~~ 240 (375)
..+.+.. +.++++...++. |.++|+.++
T Consensus 353 ~~~~~~~-------~~l~~~~~~~~~~~l~~~~~~~g 382 (711)
T 4hvt_A 353 NFISTTK-------DRVFLATYDNVVAKVVTFTLENE 382 (711)
T ss_dssp EEEEECS-------SCEEEEEEETTEEEEEEECEETT
T ss_pred EEEEEEC-------CEEEEEEEECCEEEEEEEECCCC
Confidence 7788875 567777777764 667776554
No 357
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=88.95 E-value=9.1 Score=31.86 Aligned_cols=71 Identities=10% Similarity=0.119 Sum_probs=43.7
Q ss_pred CeEEEeeCCCC--CcceEEecCCCCCCCCCCcccCCCceeEEeec-CCccccCCCCEEEEEe-cCCcEEEEeCCCcceee
Q 017194 169 SKLVMWDFSKG--RPNKIVNFGLPENNGNAGQCYNPAFVHAIAIP-DADMLDKTNKICVVAK-GDGVVDVINIESELNIS 244 (375)
Q Consensus 169 ~~i~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~ 244 (375)
-+|.+||+.+. +.++++.+.... ......+..+.+. ...-.+-++.++..+. ..+.|.++|+.+++.-.
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~-------~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swR 195 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRL-------VEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWN 195 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGG-------CCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ceEEEEECCCCCceeEEEEECCHHh-------cccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEE
Confidence 36889999999 899888875211 1123467778876 1000000244555554 46789999999876654
Q ss_pred cc
Q 017194 245 RS 246 (375)
Q Consensus 245 ~~ 246 (375)
..
T Consensus 196 v~ 197 (381)
T 3q6k_A 196 VT 197 (381)
T ss_dssp EE
T ss_pred Ec
Confidence 43
No 358
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=88.70 E-value=7.6 Score=30.67 Aligned_cols=157 Identities=15% Similarity=0.099 Sum_probs=89.7
Q ss_pred CccEEEEEEeCCCCeEEEEcCCCeEEEE---ECCCCCcccccccccCCCcceeEEEEcC-CCCeEEEEeCCCcEEEEeCc
Q 017194 58 NGPVTSLCFKSGNEDIIYVSSGKEVKSF---DVHMPASWRPLESYNYNKEEINQIVCNP-KSSFLACADDGGDVKIIDIR 133 (375)
Q Consensus 58 ~~~v~~l~~~~~~~~l~~~~~d~~i~iw---d~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~ 133 (375)
.+.+..+.-.....+|+..+..|.++-- ++...+. ..+ +.. ...|..+.... ++.+++..+.+|.++...+.
T Consensus 23 gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~-~~l--l~~-~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~ 98 (276)
T 3no0_A 23 KAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSK-VSL--KSR-EEKIVGAFIREKFGNRLLLATKKGYVKKIPLA 98 (276)
T ss_dssp CCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEE-CCC--SST-TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGG
T ss_pred CCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcc-ccc--CCC-CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHH
Confidence 3455555554455566667777766543 3322211 112 322 45666664421 46789999999999998875
Q ss_pred Cc------eeeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCc-------ceEEecCCCCCCCCCCccc
Q 017194 134 QH------CLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRP-------NKIVNFGLPENNGNAGQCY 200 (375)
Q Consensus 134 ~~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-------~~~~~~~~~~~~~~~~~~~ 200 (375)
.- .....++ ..+.+..+....... .++..+..|.+..+....-.. ...+.+.
T Consensus 99 ~~~~~~~G~~~i~lk--egD~l~~~~~~~~~~-~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~------------ 163 (276)
T 3no0_A 99 EFEYKAQGMPIIKLT--EGDEVVSIASSVDET-HILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE------------ 163 (276)
T ss_dssp GTTTCSTTEECSCCC--TTCCEEEEEECCSSC-EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC------------
T ss_pred HhhhhcCCeEEEecC--CCCEEEEEEEeCCCC-EEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC------------
Confidence 43 2222333 234555555555444 588888899988877542111 1111111
Q ss_pred CCCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCC
Q 017194 201 NPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIES 239 (375)
Q Consensus 201 ~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 239 (375)
....|..+...+ ++..++..+..|.++...+..
T Consensus 164 ~~d~vv~~~~~~------~~~~ll~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 164 KNDETSGLRIWN------GEPYLLVITAKGRVKKISHEE 196 (276)
T ss_dssp TTCCEEEEEEES------SCSEEEEEETTSCEEEEEGGG
T ss_pred CCCEEEEEEEeC------CCCEEEEEeCCCcEEEeEHHH
Confidence 234455554444 466788888889888887764
No 359
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=88.13 E-value=16 Score=34.97 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=30.0
Q ss_pred ccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCccc
Q 017194 59 GPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWR 94 (375)
Q Consensus 59 ~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 94 (375)
..+.+++..++..++++.+.|+++|+|++.+++...
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~ 271 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVE 271 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEe
Confidence 356777888888899999999999999999876543
No 360
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=87.87 E-value=9.8 Score=30.94 Aligned_cols=160 Identities=12% Similarity=0.104 Sum_probs=94.4
Q ss_pred CCceeEEEEecC--CCCEEEEeCCCCcEEEEecccCce-------eeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEE
Q 017194 15 KATATCCIASRD--RPGFVASSGEDGCICWFDLRSKDV-------QLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSF 85 (375)
Q Consensus 15 ~~~i~~~~~~~~--~~~~l~s~~~d~~i~iw~~~~~~~-------~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iw 85 (375)
.+.|.++...++ +..+++.++.+|.++--.+..... ...+.. .+.+..+........|+..+..|.+..+
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf 172 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRF 172 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEE
Confidence 345665544331 257899999999999988765322 122333 4555555555556678888889988888
Q ss_pred ECC--C----CCc--ccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCcee-------e--eeEecCcccc
Q 017194 86 DVH--M----PAS--WRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCL-------Y--KSLRAGHSSI 148 (375)
Q Consensus 86 d~~--~----~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-------~--~~~~~~~~~~ 148 (375)
... . ++. ....-.+.. ...|.++...+++.+++..+..|.++.-.+..-.. + ..+. .-.+.
T Consensus 173 ~~~~~eip~~gr~a~Gv~~i~L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~-~~~d~ 250 (327)
T 3uc1_A 173 SATDEALRPMGRATSGVQGMRFNI-DDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYD-RRRGR 250 (327)
T ss_dssp ECCTTTSCCCCTTSBCEESSCCCT-TCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCC-TTTCS
T ss_pred ECcccccCcCCcCCCCeeeecCCC-CCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEec-CCCCe
Confidence 766 2 110 011111222 45577776666667889999999999887653211 1 1222 11334
Q ss_pred eeEEEEeeCCCcEEEEeecCCeEEEeeCCC
Q 017194 149 CSSVQFIPWKPWEVISGGLDSKLVMWDFSK 178 (375)
Q Consensus 149 v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~ 178 (375)
+-.+....... .++..+.+|.+.-++...
T Consensus 251 lv~~~~~~~~~-~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 251 LVGALIVDDDS-ELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp EEEEEEECTTC-EEEEEEGGGCEEEEEGGG
T ss_pred EEEEEEeCCCc-cEEEEcCCCeEEEEehhh
Confidence 55444444334 567777788877777643
No 361
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=87.49 E-value=18 Score=34.59 Aligned_cols=35 Identities=26% Similarity=0.138 Sum_probs=29.6
Q ss_pred cEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCceeee
Q 017194 292 AASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQ 329 (375)
Q Consensus 292 ~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 329 (375)
.+.+++.. ++..++++-+.|+++|+|++.+++...
T Consensus 237 ~~~~~~~~---~~~~~lftl~~D~~LRiWsl~t~~~v~ 271 (950)
T 4gq2_M 237 TIISMIFL---STYNVLVMLSLDYKLKVLDLSTNQCVE 271 (950)
T ss_dssp CEEEEEEE---TTTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred eEEEEeec---CCCcEEEEEECCCEEEEEECCCCCeEe
Confidence 46667776 788899999999999999999997654
No 362
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=83.10 E-value=17 Score=29.28 Aligned_cols=189 Identities=18% Similarity=0.170 Sum_probs=102.6
Q ss_pred CCEEEEeCCCCcEEEEecccCceee---------EeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEEC---CCCCc---
Q 017194 28 PGFVASSGEDGCICWFDLRSKDVQL---------VTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDV---HMPAS--- 92 (375)
Q Consensus 28 ~~~l~s~~~d~~i~iw~~~~~~~~~---------~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~---~~~~~--- 92 (375)
..++++.+.+|.|+--.+.+.+... .+.. .+.+..+........|+..+..|.++-+.. .....
T Consensus 3 e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~ 81 (307)
T 1zi0_A 3 EDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKE-EDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGAR 81 (307)
T ss_dssp CEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSC
T ss_pred CcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCC
Confidence 4678888999999877765432211 1222 344444444445556777777887655543 32111
Q ss_pred ccc---cccccCCCcceeEEEEc---CCCCeEEEEeCCCcEEEEeCcC-------ceeeeeEecCcccceeEEEEeeCCC
Q 017194 93 WRP---LESYNYNKEEINQIVCN---PKSSFLACADDGGDVKIIDIRQ-------HCLYKSLRAGHSSICSSVQFIPWKP 159 (375)
Q Consensus 93 ~~~---~~~~~~~~~~v~~~~~~---~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~ 159 (375)
..+ +-.+.. ...|..+... .++.+++..+.+|.++...+.. +.....+. .. +.+-.+.......
T Consensus 82 G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~-~~-d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 82 GRPIVNLLPLEQ-DERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLV-DG-DELIGVDLTSGED 158 (307)
T ss_dssp CEEGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCC-TT-CCEEEEEEECTTC
T ss_pred CeEhhhccCCCC-CCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEEC-CC-CEEEEEEEeCCCC
Confidence 111 111222 3456555432 3456788889999999987752 22222333 23 4555555554444
Q ss_pred cEEEEeecCCeEEEeeCCCCCcc-------eEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecCCcE
Q 017194 160 WEVISGGLDSKLVMWDFSKGRPN-------KIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVV 232 (375)
Q Consensus 160 ~~l~~~~~d~~i~~wd~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i 232 (375)
.++..+.+|.+..++...-... ..+.+. ....|.++...+ ++..+++.+..|..
T Consensus 159 -~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~------------~~d~Vv~~~~~~------~~~~ll~~T~~G~~ 219 (307)
T 1zi0_A 159 -EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG------------EGDKVVSLIVPR------GDGAILTATQNGYG 219 (307)
T ss_dssp -EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC------------TTCCEEEEECCC------SSCEEEEEETTSEE
T ss_pred -EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC------------CCCEEEEEEEec------CCCEEEEEEcCCce
Confidence 5788888898888876432111 111111 234555555443 35567888888888
Q ss_pred EEEeCCC
Q 017194 233 DVINIES 239 (375)
Q Consensus 233 ~i~d~~~ 239 (375)
+-.++..
T Consensus 220 Kr~~~~e 226 (307)
T 1zi0_A 220 KRTAVAE 226 (307)
T ss_dssp EEECGGG
T ss_pred EEEEHHH
Confidence 8777643
No 363
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=83.00 E-value=19 Score=29.95 Aligned_cols=136 Identities=10% Similarity=0.064 Sum_probs=83.1
Q ss_pred cEEEEecccC--ceeeEeeec------CccEEEEEEe---CC----CCeEEEE-cCCCeEEEEECCCCCcccccccccCC
Q 017194 39 CICWFDLRSK--DVQLVTDVG------NGPVTSLCFK---SG----NEDIIYV-SSGKEVKSFDVHMPASWRPLESYNYN 102 (375)
Q Consensus 39 ~i~iw~~~~~--~~~~~~~~~------~~~v~~l~~~---~~----~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~ 102 (375)
.|.+||+.+. +.++++.-. ...+..+++. |. +.+...+ +...-|.|+|+.+++.++........
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5889999999 888777542 3567888887 22 2233322 33578999999988766554321111
Q ss_pred ---------------CcceeEEEEcCC----CCeEEEEeCCCcEEEEeCcC-----c---eeeeeEecCcc---cceeEE
Q 017194 103 ---------------KEEINQIVCNPK----SSFLACADDGGDVKIIDIRQ-----H---CLYKSLRAGHS---SICSSV 152 (375)
Q Consensus 103 ---------------~~~v~~~~~~~~----~~~l~~~~~dg~i~iwd~~~-----~---~~~~~~~~~~~---~~v~~~ 152 (375)
...+..++++|+ ++.|......+ -++|.+.+ . ..++.+- .. ..-..+
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G--~kg~~s~~~~~ 280 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLG--NRGKYNDAIAL 280 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEE--ECCTTCCEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEee--ecCCCCCcceE
Confidence 136788999997 67777766544 23443331 1 1222222 22 233345
Q ss_pred EEe-eCCCcEEEEeecCCeEEEeeCCC
Q 017194 153 QFI-PWKPWEVISGGLDSKLVMWDFSK 178 (375)
Q Consensus 153 ~~~-~~~~~~l~~~~~d~~i~~wd~~~ 178 (375)
++. .+|. ++++--....|..|+..+
T Consensus 281 ~~D~~~G~-ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 281 AYDPKTKV-IFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EECTTTCE-EEEEESSSSEEEEEETTS
T ss_pred EEeCCCCe-EEEEeccCCeEEEEeCCC
Confidence 665 4554 677777888999999875
No 364
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=82.90 E-value=16 Score=28.87 Aligned_cols=205 Identities=8% Similarity=0.040 Sum_probs=113.9
Q ss_pred CeeeecCC---CceeEEEEecCCCCEEEEeCCCCcEEEEe---cccCceeeEeeecCccEEEEEEeC--CCCeEEEEcCC
Q 017194 8 PRRLRGHK---ATATCCIASRDRPGFVASSGEDGCICWFD---LRSKDVQLVTDVGNGPVTSLCFKS--GNEDIIYVSSG 79 (375)
Q Consensus 8 ~~~l~~h~---~~i~~~~~~~~~~~~l~s~~~d~~i~iw~---~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~~~d 79 (375)
++..++|. +.+..+..... ...|+.-+.+|.++--. +..+.....+. ....|..+.. + +..+++.++.+
T Consensus 13 ir~~~g~~~~gD~~~~~~~~~t-~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~~ 89 (276)
T 3no0_A 13 IIPVEELPLEKAPVVNILRVPF-TEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATKK 89 (276)
T ss_dssp EEEGGGCCSSCCCEEEEEEEET-TSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEETT
T ss_pred eeeccCCCCCCCeEEEEEEECC-CCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeCC
Confidence 34455653 34555554444 34555566677665433 33221111133 3566666644 4 46789999999
Q ss_pred CeEEEEECCCCC---cccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcC---------ceeeeeEecCccc
Q 017194 80 KEVKSFDVHMPA---SWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQ---------HCLYKSLRAGHSS 147 (375)
Q Consensus 80 ~~i~iwd~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~~ 147 (375)
|.++-..+..-. .......+.. ...+..+........++..+..|.+..+.... |.....+. ...
T Consensus 90 G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~--~~d 166 (276)
T 3no0_A 90 GYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE--KND 166 (276)
T ss_dssp SEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC--TTC
T ss_pred CEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC--CCC
Confidence 999999875421 0001111222 34566665555666788888999988887642 22222333 235
Q ss_pred ceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCC-------cceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCC
Q 017194 148 ICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGR-------PNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTN 220 (375)
Q Consensus 148 ~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 220 (375)
.|.++...+++. .++..+..|.++...+..-. -+..+. ....+..+.... +.
T Consensus 167 ~vv~~~~~~~~~-~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~--------------~~~~lv~~~~~~------~~ 225 (276)
T 3no0_A 167 ETSGLRIWNGEP-YLLVITAKGRVKKISHEEIPKTNRGVKGTEVSG--------------TKDTLVDLIPIK------EE 225 (276)
T ss_dssp CEEEEEEESSCS-EEEEEETTSCEEEEEGGGSCCCCTTCCCEECCC--------------SSSCEEEEEEES------SE
T ss_pred EEEEEEEeCCCC-EEEEEeCCCcEEEeEHHHcccCCCCCcceEEEc--------------CCCcEEEEEEeC------CC
Confidence 566665555555 68888899998888764321 111111 123343333322 34
Q ss_pred CEEEEEecCCcEEE--EeCCC
Q 017194 221 KICVVAKGDGVVDV--INIES 239 (375)
Q Consensus 221 ~~l~~~~~dg~i~i--~d~~~ 239 (375)
..++..+.+|.+.. ++...
T Consensus 226 ~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 226 VELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEEEEEETTSCEEEEEEEGGG
T ss_pred CEEEEEcCCCeEEEeeeCHHH
Confidence 56777777888777 77654
No 365
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=76.60 E-value=28 Score=28.02 Aligned_cols=201 Identities=11% Similarity=0.093 Sum_probs=108.2
Q ss_pred CCCCeEEEEcCCCeEEEEECCCCCccc----cc--ccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcC-------
Q 017194 68 SGNEDIIYVSSGKEVKSFDVHMPASWR----PL--ESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQ------- 134 (375)
Q Consensus 68 ~~~~~l~~~~~d~~i~iwd~~~~~~~~----~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~------- 134 (375)
++...+++.+.+|.|+--.+..-+... -+ ..+.. ...+..+........++..+..|.++-+....
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 466778889999999888765321111 11 01122 23444554444556777777888877776532
Q ss_pred --cee---eeeEecCcccceeEEEEee---CCCcEEEEeecCCeEEEeeCCCCCc-----ceEEecCCCCCCCCCCcccC
Q 017194 135 --HCL---YKSLRAGHSSICSSVQFIP---WKPWEVISGGLDSKLVMWDFSKGRP-----NKIVNFGLPENNGNAGQCYN 201 (375)
Q Consensus 135 --~~~---~~~~~~~~~~~v~~~~~~~---~~~~~l~~~~~d~~i~~wd~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 201 (375)
|.. ...+. ....|.++...+ +.. .++..+..|.++...+..-.. ...+.+. .
T Consensus 85 ~~G~~i~~~l~l~--~~e~i~~~~~~~~~~~~~-~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~------------~ 149 (312)
T 1suu_A 85 SKGQNISELINLG--DQEEILTIKNSKDLTDDA-YLLLTTASGKIARFESTDFKAVKSRGVIVIKLN------------D 149 (312)
T ss_dssp ---CBGGGTSCCC--TTCCEEEEEEESCCCTTC-EEEEEETTSEEEEEEGGGGCC----CEECBCCC------------T
T ss_pred CCCcChhhccCCC--CCCEEEEEEEeccCCCCC-EEEEEeCCCeEEEEEHHHhhccCCCcEEEEecC------------C
Confidence 111 11222 233455554433 334 588889999999887753211 1111111 1
Q ss_pred CCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeE
Q 017194 202 PAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLH 281 (375)
Q Consensus 202 ~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~ 281 (375)
...+-.+.... ....++..+.+|.+..+....-..... .....
T Consensus 150 ~d~lv~~~~~~------~~~~i~l~T~~G~~~r~~~~ev~~~gR-------------------------------~~~Gv 192 (312)
T 1suu_A 150 KDFVTSAEIVF------KDEKVICLSKKGSAFIFNSRDVRLTNR-------------------------------GTQGV 192 (312)
T ss_dssp TCCEEEEEEEC------TTCEEEEEETTSEEEEEEGGGSCBCCT-------------------------------TBCCE
T ss_pred CCEEEEEEEeC------CCCEEEEEeCCCcEEEEEHHHccccCC-------------------------------CCCCe
Confidence 23444444433 356788888999988888764111000 00111
Q ss_pred eeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCc
Q 017194 282 LDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325 (375)
Q Consensus 282 ~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~ 325 (375)
....+.. ...|..+..- .++..+++.+..|..+..++...
T Consensus 193 ~~i~L~~-~d~vv~~~~v---~~~~~l~~vt~~G~~kr~~~~e~ 232 (312)
T 1suu_A 193 CGMKLKE-GDLFVKVLSV---KENPYLLIVSENGYGKRLNMSKI 232 (312)
T ss_dssp ECCCCCT-TCCEEEEEEC---TTCSEEEEEETTSEEEEEEGGGS
T ss_pred EeEEeCC-CCEEEEEEEE---CCCCeEEEEECCCceEEEEHHHh
Confidence 2223332 3445555544 45567888888899988887654
No 366
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=76.54 E-value=28 Score=28.01 Aligned_cols=191 Identities=10% Similarity=0.111 Sum_probs=110.0
Q ss_pred cCCCCEEEEeCCCCcEEEEecccCcee-------e--EeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECCC---C--
Q 017194 25 RDRPGFVASSGEDGCICWFDLRSKDVQ-------L--VTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHM---P-- 90 (375)
Q Consensus 25 ~~~~~~l~s~~~d~~i~iw~~~~~~~~-------~--~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~---~-- 90 (375)
++ ..++++.+.+|.|+--.+...+.. . .+. ..+.+..+........++..+..|.++-..... .
T Consensus 6 ~~-e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lk-e~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r 83 (312)
T 1suu_A 6 QK-ENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLN-DGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSR 83 (312)
T ss_dssp ---CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC---
T ss_pred CC-CCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccC-CCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCc
Confidence 44 568888999999998876543221 1 122 234455555555556777788888877666431 1
Q ss_pred ----CcccccccccCCCcceeEEEEcC---CCCeEEEEeCCCcEEEEeCcC-------ceeeeeEecCcccceeEEEEee
Q 017194 91 ----ASWRPLESYNYNKEEINQIVCNP---KSSFLACADDGGDVKIIDIRQ-------HCLYKSLRAGHSSICSSVQFIP 156 (375)
Q Consensus 91 ----~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~~~v~~~~~~~ 156 (375)
......-.+.. ...|..+...+ +..+++..+.+|.++...+.. +.....+. . .+.+-.+....
T Consensus 84 ~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~-~-~d~lv~~~~~~ 160 (312)
T 1suu_A 84 ASKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLN-D-KDFVTSAEIVF 160 (312)
T ss_dssp ----CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCC-T-TCCEEEEEEEC
T ss_pred cCCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecC-C-CCEEEEEEEeC
Confidence 10111111222 23455543332 456788889999999888753 22333344 2 45666665554
Q ss_pred CCCcEEEEeecCCeEEEeeCCCCC-------cceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEecC
Q 017194 157 WKPWEVISGGLDSKLVMWDFSKGR-------PNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGD 229 (375)
Q Consensus 157 ~~~~~l~~~~~d~~i~~wd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~d 229 (375)
.+. .++..+.+|.+..+....-. -+..+.+. ....+.++...+ ++..+++.+..
T Consensus 161 ~~~-~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~------------~~d~vv~~~~v~------~~~~l~~vt~~ 221 (312)
T 1suu_A 161 KDE-KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK------------EGDLFVKVLSVK------ENPYLLIVSEN 221 (312)
T ss_dssp TTC-EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC------------TTCCEEEEEECT------TCSEEEEEETT
T ss_pred CCC-EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC------------CCCEEEEEEEEC------CCCeEEEEECC
Confidence 444 68888999999888875411 11112211 124455554433 35667788888
Q ss_pred CcEEEEeCCC
Q 017194 230 GVVDVINIES 239 (375)
Q Consensus 230 g~i~i~d~~~ 239 (375)
|..+..++..
T Consensus 222 G~~kr~~~~e 231 (312)
T 1suu_A 222 GYGKRLNMSK 231 (312)
T ss_dssp SEEEEEEGGG
T ss_pred CceEEEEHHH
Confidence 9888888764
No 367
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=76.51 E-value=11 Score=33.62 Aligned_cols=58 Identities=7% Similarity=0.054 Sum_probs=40.9
Q ss_pred eEEEEcCCCCeEEEEeCC------------CcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEE
Q 017194 107 NQIVCNPKSSFLACADDG------------GDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVIS 164 (375)
Q Consensus 107 ~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 164 (375)
-.|.|+|.|+++++-..+ ..+.+.+..+++..+.+......+++.++|+|+++.+|+.
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 458899999866655432 2466667777877766663345789999999999854444
No 368
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=76.08 E-value=32 Score=28.49 Aligned_cols=149 Identities=13% Similarity=0.113 Sum_probs=87.4
Q ss_pred EecCCCCEEEEeCCCCcEEEEecccC---------ceeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEEC---CCC
Q 017194 23 ASRDRPGFVASSGEDGCICWFDLRSK---------DVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDV---HMP 90 (375)
Q Consensus 23 ~~~~~~~~l~s~~~d~~i~iw~~~~~---------~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~---~~~ 90 (375)
+-|+ ..++++.+.+|.|+--.+... ..-..++ ..+.+..+........|+..+..|.++-+.. ...
T Consensus 3 lI~~-e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~ 80 (370)
T 3l6v_A 3 LIAP-EDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEA 80 (370)
T ss_dssp CCCC-CCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBC
T ss_pred cccC-CCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCC
Confidence 3456 678999999999998765421 1122233 2456666666666667777777887665553 221
Q ss_pred C---cccccc---cccCCCcceeEEEEcC---CCCeEEEEeCCCcEEEEeCcCc-------eeeeeEecCcccceeEEEE
Q 017194 91 A---SWRPLE---SYNYNKEEINQIVCNP---KSSFLACADDGGDVKIIDIRQH-------CLYKSLRAGHSSICSSVQF 154 (375)
Q Consensus 91 ~---~~~~~~---~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~v~~~~~ 154 (375)
. ...++. .+.. ...|..+.... ++.+|+.++..|.++...+... .....++ . ...+-.+..
T Consensus 81 ~r~a~G~~i~~ll~L~~-~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~-~-~d~lv~v~~ 157 (370)
T 3l6v_A 81 GSNARGRPIINWIPLES-GERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLD-E-GDALVGVAL 157 (370)
T ss_dssp CTTSCCEEGGGSCCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCC-T-TCCEEEEEE
T ss_pred CcccCCcCHhhccCCCC-CCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeC-C-CCEEEEEEE
Confidence 1 011111 1222 34555544332 4568999999999999886532 2222343 2 345555555
Q ss_pred eeCCCcEEEEeecCCeEEEeeCC
Q 017194 155 IPWKPWEVISGGLDSKLVMWDFS 177 (375)
Q Consensus 155 ~~~~~~~l~~~~~d~~i~~wd~~ 177 (375)
..... .++..+.+|.+..++..
T Consensus 158 ~~~~~-~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 158 TDGDR-DVLLFASNGKTVRFGES 179 (370)
T ss_dssp ECSCC-EEEEEETTSEEEEEEGG
T ss_pred eCCCc-eEEEEeCCCeEEEEEcc
Confidence 54444 57888888988888764
No 369
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=75.31 E-value=31 Score=27.93 Aligned_cols=191 Identities=13% Similarity=0.108 Sum_probs=105.9
Q ss_pred cCCCCEEEEeCCCCcEEEEecccCc----eeeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEEC---CCCC---ccc
Q 017194 25 RDRPGFVASSGEDGCICWFDLRSKD----VQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDV---HMPA---SWR 94 (375)
Q Consensus 25 ~~~~~~l~s~~~d~~i~iw~~~~~~----~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~---~~~~---~~~ 94 (375)
|+ ..++++.+.+|.|+--.+...+ ....+.. .+.+..+........|+..+..|.++-... .... ...
T Consensus 3 ~~-e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~ 80 (323)
T 1wp5_A 3 AS-EDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQ 80 (323)
T ss_dssp SC-CEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCE
T ss_pred cC-CcEEEEEeCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCc
Confidence 44 5678889999999887654221 1112332 344555555555566777777887665554 2211 011
Q ss_pred ---ccccccCCCcceeEE-EEcC--CCCeEEEEeCCCcEEEEeCcCc--------eeeeeEecCcccceeEEEEeeCCCc
Q 017194 95 ---PLESYNYNKEEINQI-VCNP--KSSFLACADDGGDVKIIDIRQH--------CLYKSLRAGHSSICSSVQFIPWKPW 160 (375)
Q Consensus 95 ---~~~~~~~~~~~v~~~-~~~~--~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~ 160 (375)
.+-.+.. ...|..+ ...+ ++.+++..+.+|.++...+..- .....+. ..+.+-.+.......
T Consensus 81 ~i~~~i~L~~-~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~--e~d~lv~~~~~~~~~- 156 (323)
T 1wp5_A 81 HIANIIPIDR-DEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLK--NDDQVVDVHLTDGMN- 156 (323)
T ss_dssp EGGGTSCCCT-TCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCC--TTCCEEEEEEECSCS-
T ss_pred ChhhccCCCC-CCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeC--CCCEEEEEEEeCCCC-
Confidence 1111221 3345554 3332 2567888999999999887522 2222333 224555555554444
Q ss_pred EEEEeecCCeEEEeeCCCCCc-------ceEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCC-EEEEEecCCcE
Q 017194 161 EVISGGLDSKLVMWDFSKGRP-------NKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNK-ICVVAKGDGVV 232 (375)
Q Consensus 161 ~l~~~~~d~~i~~wd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~l~~~~~dg~i 232 (375)
.++..+.+|.+..+....-.. +..+.+. ....|.++...+ ++. .+++.+..|..
T Consensus 157 ~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~------------~~d~Vv~~~~~~------~~~~~ll~vt~~G~g 218 (323)
T 1wp5_A 157 ELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLK------------EGDYIVSGQLIT------SKDESIVVATQRGAV 218 (323)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCC------------TTCCEEEEEEEC------CTTCEEEEEETTSEE
T ss_pred EEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeC------------CCCEEEEEEEEc------CCCcEEEEEECCCce
Confidence 588888899988887653211 1111111 234455554433 233 67777888887
Q ss_pred EEEeCCC
Q 017194 233 DVINIES 239 (375)
Q Consensus 233 ~i~d~~~ 239 (375)
+..++..
T Consensus 219 Kr~~~~e 225 (323)
T 1wp5_A 219 KKMKLTE 225 (323)
T ss_dssp EEEEGGG
T ss_pred EEEEHHH
Confidence 7766653
No 370
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=73.63 E-value=35 Score=27.67 Aligned_cols=152 Identities=9% Similarity=-0.019 Sum_probs=82.0
Q ss_pred CCCCeEEEEcCCCeEEEEECCCCCcccc-cccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCc---------Ccee
Q 017194 68 SGNEDIIYVSSGKEVKSFDVHMPASWRP-LESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIR---------QHCL 137 (375)
Q Consensus 68 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---------~~~~ 137 (375)
|+...+++.+.+|.|+--.+..-+.... -..+.. ...+..+........|+..+..|.++-+... .|..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 5667788899999998776542100000 011222 3345454444455677777788887666543 1232
Q ss_pred eee-EecCcccceeEEEEeeC---CCcEEEEeecCCeEEEeeCCCCCc------ceEEecCCCCCCCCCCcccCCCceeE
Q 017194 138 YKS-LRAGHSSICSSVQFIPW---KPWEVISGGLDSKLVMWDFSKGRP------NKIVNFGLPENNGNAGQCYNPAFVHA 207 (375)
Q Consensus 138 ~~~-~~~~~~~~v~~~~~~~~---~~~~l~~~~~d~~i~~wd~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~ 207 (375)
+.. +.-.....|.++...++ +. .++..+.+|.++--.+..-.. +..+.+. ....+-.
T Consensus 82 i~~~i~L~~~e~Iv~~~~~~~~~~~~-~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~------------e~d~lv~ 148 (323)
T 1wp5_A 82 IANIIPIDRDEEIIKAIPINDFELNG-YFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLK------------NDDQVVD 148 (323)
T ss_dssp GGGTSCCCTTCCEEEEEEESCTTSSC-EEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCC------------TTCCEEE
T ss_pred hhhccCCCCCCEEEEEEEecccCCCc-eEEEEeCCCeEEEeEHHHhhhccccCceEEEEeC------------CCCEEEE
Confidence 211 11012334555543332 44 588889999999887753221 1111211 1234444
Q ss_pred EeecCCccccCCCCEEEEEecCCcEEEEeCCC
Q 017194 208 IAIPDADMLDKTNKICVVAKGDGVVDVINIES 239 (375)
Q Consensus 208 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 239 (375)
+.... ....++..+.+|.+..+....
T Consensus 149 ~~~~~------~~~~i~l~T~~G~~irf~~~e 174 (323)
T 1wp5_A 149 VHLTD------GMNELFLVTHNGYALWFDESE 174 (323)
T ss_dssp EEEEC------SCSEEEEEETTSEEEEEEGGG
T ss_pred EEEeC------CCCEEEEEeCCCcEEEEEHHH
Confidence 44333 355677888888888887764
No 371
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=72.43 E-value=33 Score=31.34 Aligned_cols=37 Identities=16% Similarity=0.148 Sum_probs=29.6
Q ss_pred eeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcceEEecC
Q 017194 149 CSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFG 188 (375)
Q Consensus 149 v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 188 (375)
|.++.+ +.. ++++-+.|.++|+||+++++++......
T Consensus 224 Is~~~~--~~~-fLftL~~Dh~LRiWsL~t~~lv~t~DL~ 260 (729)
T 3f7f_A 224 ISCKLF--HER-YLIVLTQNCHLKIWDLTSFTLIQDYDMV 260 (729)
T ss_dssp EEEEEE--TTT-EEEEEETTCEEEEEETTTTEEEEEEETT
T ss_pred EEEecc--CCc-EEEEEEcCCeEEEEEcCCCceEEeeccc
Confidence 444433 344 7999999999999999999999888874
No 372
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=68.32 E-value=50 Score=27.36 Aligned_cols=154 Identities=11% Similarity=0.031 Sum_probs=84.1
Q ss_pred EeCCCCeEEEEcCCCeEEEEECCCCCc------ccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCc------
Q 017194 66 FKSGNEDIIYVSSGKEVKSFDVHMPAS------WRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIR------ 133 (375)
Q Consensus 66 ~~~~~~~l~~~~~d~~i~iwd~~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~------ 133 (375)
+-|+...+++.+.+|.|+--.+..-+. ...-..++. ...+..+........|+..+..|.++-+...
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~ 81 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAG 81 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCC
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCC
Confidence 346778899999999998766532100 001111111 3455555555555667777778877666542
Q ss_pred ---CceeeeeE-ecCcccceeEEEEee---CCCcEEEEeecCCeEEEeeCCCCCc-----ceEEecCCCCCCCCCCcccC
Q 017194 134 ---QHCLYKSL-RAGHSSICSSVQFIP---WKPWEVISGGLDSKLVMWDFSKGRP-----NKIVNFGLPENNGNAGQCYN 201 (375)
Q Consensus 134 ---~~~~~~~~-~~~~~~~v~~~~~~~---~~~~~l~~~~~d~~i~~wd~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 201 (375)
.|..+..+ .-.....|.++...+ .+. .++.++..|.++.-.+..-.. +..+.+. .
T Consensus 82 r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~-~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~------------~ 148 (370)
T 3l6v_A 82 SNARGRPIINWIPLESGERVQAVLPVREYADNR-YVFMATRNGTVKKTPLSEFAFRLARGKIAINLD------------E 148 (370)
T ss_dssp TTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTC-EEEEEETTSEEEEEEGGGGCSCCTTCEESSCCC------------T
T ss_pred cccCCcCHhhccCCCCCCEEEEEEEeccCCCCc-EEEEEeCCCeEEEeEHHHhhcccCCceEEEEeC------------C
Confidence 22222211 101234566554432 233 689999999999887643221 1111111 1
Q ss_pred CCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCC
Q 017194 202 PAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIES 239 (375)
Q Consensus 202 ~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 239 (375)
...+-.+.... ....++..+..|.+..++...
T Consensus 149 ~d~lv~v~~~~------~~~~i~l~T~~G~~irf~~~~ 180 (370)
T 3l6v_A 149 GDALVGVALTD------GDRDVLLFASNGKTVRFGEST 180 (370)
T ss_dssp TCCEEEEEEEC------SCCEEEEEETTSEEEEEEGGG
T ss_pred CCEEEEEEEeC------CCceEEEEeCCCeEEEEEccc
Confidence 23344444433 355777788888888887653
No 373
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=68.18 E-value=32 Score=33.70 Aligned_cols=38 Identities=11% Similarity=0.161 Sum_probs=31.7
Q ss_pred ceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEe
Q 017194 105 EINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLR 142 (375)
Q Consensus 105 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 142 (375)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45566667788899999999999999999998877654
No 374
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=68.13 E-value=41 Score=29.83 Aligned_cols=65 Identities=6% Similarity=-0.001 Sum_probs=43.4
Q ss_pred ceeEEEEcCCCCeEEEEeC------------CCcEEEEeCcCceeeeeEecCcccceeEEEEeeCCCcEEEEeecCC
Q 017194 105 EINQIVCNPKSSFLACADD------------GGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDS 169 (375)
Q Consensus 105 ~v~~~~~~~~~~~l~~~~~------------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 169 (375)
....|.|.++|.+.++... ...+..++..+++....+.......++.++|+||++.+++....-|
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQHPG 553 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHPG 553 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEESTT
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeCCC
Confidence 4567999999977664432 1257777777777766555123467899999999985555544333
No 375
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=66.95 E-value=83 Score=29.34 Aligned_cols=152 Identities=11% Similarity=0.056 Sum_probs=77.6
Q ss_pred CCceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeee-------cCccEEEEEEeCCC-CeEEEEcCCCe----E
Q 017194 15 KATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDV-------GNGPVTSLCFKSGN-EDIIYVSSGKE----V 82 (375)
Q Consensus 15 ~~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~-------~~~~v~~l~~~~~~-~~l~~~~~d~~----i 82 (375)
.+.|.+++++|.+...++.+...+.|...+ +.|+.=..+.. ....|.+|++.|.. +.++++..... -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 468999999997666777777666655444 23332222221 12469999999853 34444432211 2
Q ss_pred EEEE-CCCCCcccccccc-c-----CCCcceeEEEEcCC-CCeEEEEeCCCcEEEEeCcCceeeeeEec-----Ccccce
Q 017194 83 KSFD-VHMPASWRPLESY-N-----YNKEEINQIVCNPK-SSFLACADDGGDVKIIDIRQHCLYKSLRA-----GHSSIC 149 (375)
Q Consensus 83 ~iwd-~~~~~~~~~~~~~-~-----~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~v 149 (375)
.||. ...++.++.+..- . .....+..+++.|. ...++++...+.|.. ..+.++.-..+.. .....+
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~~~~~~~~ 171 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDAFTNGIGY 171 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCCCSTTTCE
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCccccCCCCCe
Confidence 3343 3345444444321 0 00113567888874 345666654444332 2223332222220 012457
Q ss_pred eEEEEeeCCCcEEEEeecC
Q 017194 150 SSVQFIPWKPWEVISGGLD 168 (375)
Q Consensus 150 ~~~~~~~~~~~~l~~~~~d 168 (375)
..+.++|.....++.+..+
T Consensus 172 ~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 172 TSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEECTTSTTCEEEEESS
T ss_pred EEEEECCCCCCEEEEEEcC
Confidence 7888888654345555544
No 376
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=65.93 E-value=45 Score=25.90 Aligned_cols=145 Identities=10% Similarity=0.052 Sum_probs=79.6
Q ss_pred CEEEEeCCCCcEEEEecccCce-eeEeeecCccEEEEEEeCCCCeEEEEcCCCeEEEEECC---CCCc-cc---cccccc
Q 017194 29 GFVASSGEDGCICWFDLRSKDV-QLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVH---MPAS-WR---PLESYN 100 (375)
Q Consensus 29 ~~l~s~~~d~~i~iw~~~~~~~-~~~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~---~~~~-~~---~~~~~~ 100 (375)
..+++.+.+|.|+--....... ...+.. .+.+..+........|+..+..|.++-.... ..+. .. ..-.+.
T Consensus 3 ~v~v~lT~~G~iKr~~~~~~~~~~~~lke-~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~ 81 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGHDIDAPGLNYKA-GDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP 81 (256)
T ss_dssp EEEEEEETTSEEEEEESSCCCSTTSCCCT-TCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC
T ss_pred CEEEEEeCCCEEEEeeCCcCCceeccCCC-CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC
Confidence 3455666777776555432111 112332 3444444444444566677778876655432 1110 11 111122
Q ss_pred CCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcC-------ceeeeeEecCcccceeEEEEe-eCCCcEEEEeecCCeEE
Q 017194 101 YNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQ-------HCLYKSLRAGHSSICSSVQFI-PWKPWEVISGGLDSKLV 172 (375)
Q Consensus 101 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~d~~i~ 172 (375)
. ...|..+....++.+|+..+..|.++...+.. +.....++ . .+.+-.+... ..+. .++..+.+|.+.
T Consensus 82 ~-~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~-~-~d~lv~~~~~~~~~~-~i~l~T~~G~~l 157 (256)
T 1zvt_A 82 P-GATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLP-E-NAHVMPPVVIEDASD-MLLAITQAGRML 157 (256)
T ss_dssp T-TCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCC-T-TCCBCCCEECCCTTC-EEEEEETTSEEE
T ss_pred C-CCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEEC-C-CCEEEEEEEecCCCC-EEEEEcCCCeEE
Confidence 2 34666664434566788889999999988753 23333444 2 3455555555 2334 688888999998
Q ss_pred EeeCCC
Q 017194 173 MWDFSK 178 (375)
Q Consensus 173 ~wd~~~ 178 (375)
.+....
T Consensus 158 rf~~~e 163 (256)
T 1zvt_A 158 MFPVSD 163 (256)
T ss_dssp EEEGGG
T ss_pred EEEHHH
Confidence 888754
No 377
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=65.79 E-value=50 Score=26.45 Aligned_cols=201 Identities=7% Similarity=0.054 Sum_probs=102.4
Q ss_pred CCCCeEEEEcCCCeEEEEECCCCCccc----ccc--cccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCc--------
Q 017194 68 SGNEDIIYVSSGKEVKSFDVHMPASWR----PLE--SYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIR-------- 133 (375)
Q Consensus 68 ~~~~~l~~~~~d~~i~iwd~~~~~~~~----~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-------- 133 (375)
|+...+++.+.+|.|+--.+..-+... -+. .+.. ...+..+........|+..+..|.++-+...
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKE-EDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 345678888999998877765311100 000 1111 2344444444455567777778887666543
Q ss_pred -Cceeee---eEecCcccceeEEEEe---eCCCcEEEEeecCCeEEEeeCCCCCcc-----eEEecCCCCCCCCCCcccC
Q 017194 134 -QHCLYK---SLRAGHSSICSSVQFI---PWKPWEVISGGLDSKLVMWDFSKGRPN-----KIVNFGLPENNGNAGQCYN 201 (375)
Q Consensus 134 -~~~~~~---~~~~~~~~~v~~~~~~---~~~~~~l~~~~~d~~i~~wd~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 201 (375)
.|..+. .+. ....|.++... +++. .++..+..|.++--.+..-... ..+.+. .
T Consensus 80 a~G~~i~~~l~l~--~~e~i~~~~~~~~~~~~~-~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~------------~ 144 (307)
T 1zi0_A 80 ARGRPIVNLLPLE--QDERITAILPVTEFEEGV-KVFMATANGTVKKTVLTEFNRLRTAGKVAIKLV------------D 144 (307)
T ss_dssp SCCEEGGGTSCCC--TTCCEEEEEEESCCCTTC-EEEEEETTSEEEEEEGGGGTTCCTTCEESSCCC------------T
T ss_pred CCCeEhhhccCCC--CCCEEEEEEEeccCCCCc-EEEEEeCCCeEEEEEHHHhhccccCCeEEEEEC------------C
Confidence 122221 222 23456555442 2344 6888999999998876432111 111111 1
Q ss_pred CCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCCcceeecccccCCCCCCceeecccccceeeeeeeecCCcceeE
Q 017194 202 PAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLH 281 (375)
Q Consensus 202 ~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~ 281 (375)
...+-.+.... +...++..+.+|.+..++...-..... ...| .
T Consensus 145 ~d~lv~~~~~~------~~~~i~l~T~~G~~irf~~~~v~~~gr--------------~a~G-----------------v 187 (307)
T 1zi0_A 145 GDELIGVDLTS------GEDEVMLFSAEGKVVRFKESSVRAMGC--------------NTTG-----------------V 187 (307)
T ss_dssp TCCEEEEEEEC------TTCEEEEEETTSEEEEEEGGGSCBCCT--------------TCCC-----------------E
T ss_pred CCEEEEEEEeC------CCCEEEEECCCCcEEEEEHHHcCccCC--------------CCCC-----------------e
Confidence 23444444333 355677788888888877653111000 0000 1
Q ss_pred eeeeecCCCccEEEEEEeecCCCCcEEEEecCCCeEEEEeCCCc
Q 017194 282 LDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 325 (375)
Q Consensus 282 ~~~~~~~~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~iwd~~~~ 325 (375)
....+.. ...|.++... +++..++..+..|.++-.++...
T Consensus 188 ~~i~L~~-~d~Vv~~~~~---~~~~~ll~~T~~G~~Kr~~~~e~ 227 (307)
T 1zi0_A 188 RGIRLGE-GDKVVSLIVP---RGDGAILTATQNGYGKRTAVAEY 227 (307)
T ss_dssp ECCCCCT-TCCEEEEECC---CSSCEEEEEETTSEEEEECGGGS
T ss_pred EeEEeCC-CCEEEEEEEe---cCCCEEEEEEcCCceEEEEHHHh
Confidence 1112322 3455555544 45567888888899888877543
No 378
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=65.43 E-value=59 Score=27.06 Aligned_cols=152 Identities=11% Similarity=-0.021 Sum_probs=78.1
Q ss_pred CCeEEEEcCCCeEEEEECCCCCc-----------ccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcCc-e-
Q 017194 70 NEDIIYVSSGKEVKSFDVHMPAS-----------WRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQH-C- 136 (375)
Q Consensus 70 ~~~l~~~~~d~~i~iwd~~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~- 136 (375)
....+....||.|+.|-...... ...+..+. ...+..++++......++-..||.|+.|-.... +
T Consensus 62 ~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~--~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqL 139 (389)
T 3kci_A 62 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ--HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 139 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGT--TSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTT
T ss_pred CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEccccc--CCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcC
Confidence 34555667789999997543111 11111111 223455666666667777778999999964321 0
Q ss_pred ---------eeeeEecCcccceeEEEEeeCCCcEEEEeecCCeEEEeeCCCCCcc------eEEecCCCCCCCCCCcccC
Q 017194 137 ---------LYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPN------KIVNFGLPENNGNAGQCYN 201 (375)
Q Consensus 137 ---------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~------~~~~~~~~~~~~~~~~~~~ 201 (375)
....+.......|..++.... ..+.-..+|.|+.|-....-.+ ...... ......
T Consensus 140 G~g~~~~~~~p~~v~~l~~~~i~~va~G~~---hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~-------~v~~~~ 209 (389)
T 3kci_A 140 GHGNRSPCDRPRVIESLRGIEVVDVAAGGA---HSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-------LVEALQ 209 (389)
T ss_dssp CSSSCCCEEEEEECGGGTTSCEEEEEECSS---EEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEE-------ECGGGT
T ss_pred CCCCCccCcCCeEecccCCCeEEEEEeCcC---eEEEEeCCCeEEEeCCCCCCCcCCCCCcccccce-------EecccC
Confidence 111111011124555554322 5666678999999976431110 000000 000011
Q ss_pred CCceeEEeecCCccccCCCCEEEEEecCCcEEEEeCCC
Q 017194 202 PAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIES 239 (375)
Q Consensus 202 ~~~v~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 239 (375)
...+..++... .....++-..+|.|..|-...
T Consensus 210 ~~~v~~ia~G~------g~~~t~~l~~~G~v~~wG~n~ 241 (389)
T 3kci_A 210 GHRVVDIACGS------GDAQTLCLTDDDTVWSWGDGD 241 (389)
T ss_dssp TSCEEEEEECC------SSCEEEEEETTTEEEEEECCG
T ss_pred CCeEEEEEEcC------CCcEEEEEccCCEEEEEeCCC
Confidence 23455665532 235666667889999997654
No 379
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=64.71 E-value=6.5 Score=38.45 Aligned_cols=38 Identities=13% Similarity=0.002 Sum_probs=31.2
Q ss_pred ceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEee
Q 017194 17 TATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTD 55 (375)
Q Consensus 17 ~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~ 55 (375)
.+.+++..++ ..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~-~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLST-YNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETT-TTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCC-ccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 4555666676 7899999999999999999999877654
No 380
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=62.93 E-value=37 Score=30.30 Aligned_cols=57 Identities=9% Similarity=0.018 Sum_probs=39.2
Q ss_pred eEEEEecCCCCEEEEeCCC------------CcEEEEecccCceeeEeeec-CccEEEEEEeCCCCeEEEE
Q 017194 19 TCCIASRDRPGFVASSGED------------GCICWFDLRSKDVQLVTDVG-NGPVTSLCFKSGNEDIIYV 76 (375)
Q Consensus 19 ~~~~~~~~~~~~l~s~~~d------------~~i~iw~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~~~ 76 (375)
-.|.|+|. |++++.-..+ ..+.+.+..+++....+..+ ...++.++|+||++.|++.
T Consensus 479 DNL~fd~~-G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTT-CCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCC-CCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 45789998 6765543221 24566677777776666554 5789999999999877654
No 381
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=55.69 E-value=23 Score=32.26 Aligned_cols=36 Identities=17% Similarity=0.242 Sum_probs=28.9
Q ss_pred ceeEEEEcCCCCeEEEEeCCCcEEEEeCcCceeeeeEe
Q 017194 105 EINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLR 142 (375)
Q Consensus 105 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 142 (375)
.|.++.+ +..++++-+.|.++|+|++++++++....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 3554444 46799999999999999999999887765
No 382
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=55.65 E-value=79 Score=28.09 Aligned_cols=62 Identities=13% Similarity=-0.014 Sum_probs=40.4
Q ss_pred ceeEEEEeeCCCcEEEEeec------------CCeEEEeeCCCCCcceEEecCCCCCCCCCCcccCCCceeEEeecCCcc
Q 017194 148 ICSSVQFIPWKPWEVISGGL------------DSKLVMWDFSKGRPNKIVNFGLPENNGNAGQCYNPAFVHAIAIPDADM 215 (375)
Q Consensus 148 ~v~~~~~~~~~~~~l~~~~~------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 215 (375)
....|.|.++|. +.+.... ...|..++..+++....+... ....++.++|+|
T Consensus 477 sPDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P------------~~aEpnGiafSP--- 540 (592)
T 4a9v_A 477 SPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP------------IGCEVTGISFSP--- 540 (592)
T ss_dssp CEEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC------------TTCEEEEEEECT---
T ss_pred CCCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC------------CCccccCCEECC---
Confidence 457899999987 4552211 126777777777654444322 135689999999
Q ss_pred ccCCCCEEEEEec
Q 017194 216 LDKTNKICVVAKG 228 (375)
Q Consensus 216 ~~~~~~~l~~~~~ 228 (375)
|++.|+++-+
T Consensus 541 ---D~ktLfV~vQ 550 (592)
T 4a9v_A 541 ---DQKTLFVGIQ 550 (592)
T ss_dssp ---TSSEEEEEEE
T ss_pred ---CCCEEEEEEe
Confidence 7888887653
No 383
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=45.07 E-value=1.9e+02 Score=26.67 Aligned_cols=107 Identities=8% Similarity=0.019 Sum_probs=57.5
Q ss_pred ceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeeec-------CccEEEEEEeCC-CCeEEEEcCC-------Ce
Q 017194 17 TATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVG-------NGPVTSLCFKSG-NEDIIYVSSG-------KE 81 (375)
Q Consensus 17 ~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~-------~~~v~~l~~~~~-~~~l~~~~~d-------~~ 81 (375)
.|..++++|.+...+..+...+.|...+ ..++.-..+..+ ...|.+|++.|. .+.++++... +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 7999999998656677677566555544 223322222211 246899999983 3344444321 12
Q ss_pred EEEEEC-CCCCcccccccc-c--C---CCcceeEEEEcCC-CCeEEEEeCC
Q 017194 82 VKSFDV-HMPASWRPLESY-N--Y---NKEEINQIVCNPK-SSFLACADDG 124 (375)
Q Consensus 82 i~iwd~-~~~~~~~~~~~~-~--~---~~~~v~~~~~~~~-~~~l~~~~~d 124 (375)
..||.. ..++.++.+..- . . ....+..++++|. ...++++...
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 445554 334444443321 0 0 0112467899885 3566666533
No 384
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=39.82 E-value=2.3e+02 Score=26.13 Aligned_cols=108 Identities=11% Similarity=0.057 Sum_probs=56.5
Q ss_pred cEEEEEEeCCC-CeEEEEcCCCeEEEEECCCCCcccccccccC----CCcceeEEEEcCC-CCeEEEEeCC-------Cc
Q 017194 60 PVTSLCFKSGN-EDIIYVSSGKEVKSFDVHMPASWRPLESYNY----NKEEINQIVCNPK-SSFLACADDG-------GD 126 (375)
Q Consensus 60 ~v~~l~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~v~~~~~~~~-~~~l~~~~~d-------g~ 126 (375)
.|..|+++|.. ..++++...+.|...+- .++.+..+..... ....|.++++.|. .+.++++... +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D-~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDP-STETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEET-TTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCC-CCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 78999999864 45666665566655542 2444454432111 1245889999983 3445444321 12
Q ss_pred EEEEeC-cCceeeeeEecCc--------ccceeEEEEeeCCCcEEEEeecC
Q 017194 127 VKIIDI-RQHCLYKSLRAGH--------SSICSSVQFIPWKPWEVISGGLD 168 (375)
Q Consensus 127 i~iwd~-~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~~l~~~~~d 168 (375)
..||.- +.++.-..+.... ...+..|+++|..+..++.+...
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 344443 3333322222011 01246789998765456666533
No 385
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=37.32 E-value=2.6e+02 Score=26.05 Aligned_cols=157 Identities=13% Similarity=0.143 Sum_probs=77.3
Q ss_pred CccEEEEEEeCCC-CeEEEEcCCCeEEEEECCCCCcccccccccC----CCcceeEEEEcCCC-CeEEEEeCCCc----E
Q 017194 58 NGPVTSLCFKSGN-EDIIYVSSGKEVKSFDVHMPASWRPLESYNY----NKEEINQIVCNPKS-SFLACADDGGD----V 127 (375)
Q Consensus 58 ~~~v~~l~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~-~~l~~~~~dg~----i 127 (375)
...|.+|+++|.. ..+++++..+.|...+ ..++.++.+..... ....+.++++.|.. ..++++..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 4689999999863 4566666666665544 23455555433111 13468999999843 44544433211 2
Q ss_pred EEE-eCcCceeeeeEecCc--------ccceeEEEEeeCCCcEEEEeecCCeEEEeeCCC-CCcceEEecCCCCCCCCCC
Q 017194 128 KII-DIRQHCLYKSLRAGH--------SSICSSVQFIPWKPWEVISGGLDSKLVMWDFSK-GRPNKIVNFGLPENNGNAG 197 (375)
Q Consensus 128 ~iw-d~~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~ 197 (375)
.|| ..+.++.-..+.... ...+..++++|.....+..+...+. +|-... ++--..+. ..+...
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG~TW~~~~-~~~~~~---- 165 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRAKTWTNVT-SIPDAF---- 165 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTTSSCEEET-TSCCCC----
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCCcccCCCc-cCcccc----
Confidence 233 233343322222000 1135678888765435666654443 333333 33322222 111000
Q ss_pred cccCCCceeEEeecCCccccCCCCEEEEEecC
Q 017194 198 QCYNPAFVHAIAIPDADMLDKTNKICVVAKGD 229 (375)
Q Consensus 198 ~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~d 229 (375)
.....+..+.+.|. ++..++++..+
T Consensus 166 --~~~~~~~~i~~~p~-----~~~~~~~~~~~ 190 (789)
T 1sqj_A 166 --TNGIGYTSVIFDPE-----RNGTIYASATA 190 (789)
T ss_dssp --STTTCEEEEEECTT-----STTCEEEEESS
T ss_pred --CCCCCeEEEEECCC-----CCCEEEEEEcC
Confidence 01235678888874 45566666554
No 386
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=33.11 E-value=2.1e+02 Score=23.68 Aligned_cols=189 Identities=14% Similarity=0.079 Sum_probs=95.9
Q ss_pred EEEEeCCCCcEEEEecccCce-----------eeEeee-cCccEEEEEEeCCCCeEEEEcCCCeEEEEECCCCCc-----
Q 017194 30 FVASSGEDGCICWFDLRSKDV-----------QLVTDV-GNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPAS----- 92 (375)
Q Consensus 30 ~l~s~~~d~~i~iw~~~~~~~-----------~~~~~~-~~~~v~~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~----- 92 (375)
..+.-..||.|..|=...... ...+.. ....+..++.+....+.++...+|.|+.|-......
T Consensus 64 ~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~ 143 (389)
T 3kci_A 64 TLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGN 143 (389)
T ss_dssp EEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSS
T ss_pred eEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCC
Confidence 444445678888886432111 111111 223455567766667777778899999997543110
Q ss_pred ------ccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcC-ce----------eeeeEecCcccceeEEEEe
Q 017194 93 ------WRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQ-HC----------LYKSLRAGHSSICSSVQFI 155 (375)
Q Consensus 93 ------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~----------~~~~~~~~~~~~v~~~~~~ 155 (375)
...+..+. ...|..++.. ....++-..+|.|+.|-... ++ ....+.......|..++..
T Consensus 144 ~~~~~~p~~v~~l~--~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G 219 (389)
T 3kci_A 144 RSPCDRPRVIESLR--GIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 219 (389)
T ss_dssp CCCEEEEEECGGGT--TSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC
T ss_pred CccCcCCeEecccC--CCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEc
Confidence 11112221 2245555543 33555566889999996532 11 0111110112345566554
Q ss_pred eCCCcEEEEeecCCeEEEeeCCCCCcc-------eEEecCCCCCCCCCCcccCCCceeEEeecCCccccCCCCEEEEEec
Q 017194 156 PWKPWEVISGGLDSKLVMWDFSKGRPN-------KIVNFGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKG 228 (375)
Q Consensus 156 ~~~~~~l~~~~~d~~i~~wd~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~ 228 (375)
.... ..+.-..||.|+.|-....-.+ ....... .......|..++.. ....++-..
T Consensus 220 ~g~~-~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v--------~~~~~~~v~~v~~G--------~~hs~alt~ 282 (389)
T 3kci_A 220 SGDA-QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI--------DSLTGLGVVKVECG--------SQFSVALTK 282 (389)
T ss_dssp CSSC-EEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEEC--------GGGTTSCEEEEEEE--------TTEEEEEET
T ss_pred CCCc-EEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEe--------cccCCCcEEEEeCC--------CCEEEEEeC
Confidence 3223 5666678999999975432111 0000000 00012235555553 344455578
Q ss_pred CCcEEEEeCCC
Q 017194 229 DGVVDVINIES 239 (375)
Q Consensus 229 dg~i~i~d~~~ 239 (375)
+|.|+.|-...
T Consensus 283 ~G~v~~wG~n~ 293 (389)
T 3kci_A 283 SGAVYTWGKGD 293 (389)
T ss_dssp TSCEEEEECCG
T ss_pred CCeEEEEeCCC
Confidence 89999997654
No 387
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=25.78 E-value=3.9e+02 Score=24.54 Aligned_cols=115 Identities=10% Similarity=-0.069 Sum_probs=56.4
Q ss_pred EEEEE-EeCCCCeEEEEcC-C----CeEEEEECCCCCcccccccccCCC-----cceeEEEEcCCCCeEEEEe-------
Q 017194 61 VTSLC-FKSGNEDIIYVSS-G----KEVKSFDVHMPASWRPLESYNYNK-----EEINQIVCNPKSSFLACAD------- 122 (375)
Q Consensus 61 v~~l~-~~~~~~~l~~~~~-d----~~i~iwd~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~------- 122 (375)
...+. ++|++++++.+-+ + ..++++|+.+++.+..--...... .....++|..++ .++.+.
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~-~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKD-TIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETT-EEEECCCCSTTCB
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCC-EEEEEeCCCCCCc
Confidence 34455 8899988765432 2 389999999875443111100000 012344776333 444332
Q ss_pred ----CCCcEEEEeCcCce--eeeeEecCcccce-eEEEEeeCCCc----EEEEee---cCCeEEEeeCC
Q 017194 123 ----DGGDVKIIDIRQHC--LYKSLRAGHSSIC-SSVQFIPWKPW----EVISGG---LDSKLVMWDFS 177 (375)
Q Consensus 123 ----~dg~i~iwd~~~~~--~~~~~~~~~~~~v-~~~~~~~~~~~----~l~~~~---~d~~i~~wd~~ 177 (375)
....|+.|.+-+.. -...+. +....+ .....++++++ .+++.+ ....+.+.|..
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 277 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFE-VPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTK 277 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEE-CCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECS
T ss_pred CcCCCCCEEEEEECCCChHHCeEEec-cCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCC
Confidence 12458888776542 223344 322222 23445566653 344433 22445666654
No 388
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=25.67 E-value=1.9e+02 Score=25.52 Aligned_cols=69 Identities=16% Similarity=0.067 Sum_probs=40.2
Q ss_pred eeEEEEeeCCCc-EEEEeecCCeEEEeeCCCCC----cceEEecCCCCCCCCCCcccCCCcee-EEeecCCccccCCCCE
Q 017194 149 CSSVQFIPWKPW-EVISGGLDSKLVMWDFSKGR----PNKIVNFGLPENNGNAGQCYNPAFVH-AIAIPDADMLDKTNKI 222 (375)
Q Consensus 149 v~~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~ 222 (375)
.++++....+.+ +++.|+.+|.|.-..+.... .+..+.... ...+|. .|.+++ +...
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~-----------~~~pv~~~l~~~~------~~~~ 464 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFK-----------DGSPILRDMAFSI------NQLY 464 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCT-----------TCCCCCSCCEECT------TSSE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeec-----------CCCccccceEEcc------CCCe
Confidence 455555544332 67788899987665554221 222333220 134564 788887 6888
Q ss_pred EEEEecCCcEEE
Q 017194 223 CVVAKGDGVVDV 234 (375)
Q Consensus 223 l~~~~~dg~i~i 234 (375)
|++++..+.+++
T Consensus 465 Lyv~s~~~V~kv 476 (539)
T 3al9_A 465 LYVMSERQVTRV 476 (539)
T ss_dssp EEEECSSEEEEE
T ss_pred EEEEecccccee
Confidence 999888755444
No 389
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=25.27 E-value=2.2e+02 Score=25.04 Aligned_cols=69 Identities=10% Similarity=0.146 Sum_probs=39.9
Q ss_pred cEEEEEEeCCC--CeEEEEcCCCeEEEEECCCCC----cccccccccCCCccee-EEEEcCCCCeEEEEeCCCcEEE
Q 017194 60 PVTSLCFKSGN--EDIIYVSSGKEVKSFDVHMPA----SWRPLESYNYNKEEIN-QIVCNPKSSFLACADDGGDVKI 129 (375)
Q Consensus 60 ~v~~l~~~~~~--~~l~~~~~d~~i~iwd~~~~~----~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~i 129 (375)
..++|+....+ ..+..|+.+|.|.-..+.... ..+.+..+ ....+|. .+.++++..+|++++..+.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~-~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVF-KDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECC-TTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEee-cCCCccccceEEccCCCeEEEEecccccee
Confidence 45556554433 346677888876544443221 11222222 1245775 8999999999999977654444
No 390
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=25.21 E-value=4.1e+02 Score=24.58 Aligned_cols=155 Identities=8% Similarity=-0.009 Sum_probs=0.0
Q ss_pred CceeEEEEecCCCCEEEEeCCCCcEEEEecccCceeeEeee------------cCccEEEEEEeC-CCCeEEEEcCC---
Q 017194 16 ATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDV------------GNGPVTSLCFKS-GNEDIIYVSSG--- 79 (375)
Q Consensus 16 ~~i~~~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~------------~~~~v~~l~~~~-~~~~l~~~~~d--- 79 (375)
+.|.+++++|.+...+..+...|.|...+ +.|+.=..+.. ....+.++++.| +.+.++++...
T Consensus 21 g~i~~i~~~p~~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~ 99 (763)
T 3a0f_A 21 GFISGLVAHPTEKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQ 99 (763)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTT
T ss_pred CceeEEEeCCCCCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEeccccc
Q ss_pred ---CeEEEEECCCCCccccccccc------CCCcceeEEEEcC-CCCeEEEEeCCCcEEEEeCcCceeeeeEecCcccc-
Q 017194 80 ---KEVKSFDVHMPASWRPLESYN------YNKEEINQIVCNP-KSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSI- 148 (375)
Q Consensus 80 ---~~i~iwd~~~~~~~~~~~~~~------~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~- 148 (375)
+...+.....++.++.+..-. ........++++| +...++++...+.|. ...+.++.-..+. .....
T Consensus 100 ~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~-~S~DgG~TW~~~~-~~~~~~ 177 (763)
T 3a0f_A 100 WDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLW-RSTDRAQTWSRMN-QLPDSS 177 (763)
T ss_dssp TCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEE-EESSTTSSCEECT-TSCCCS
T ss_pred CCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEE-EECCCCcCccccc-cCcccC
Q ss_pred -----eeEEEEeeCCCcEEEEeecCC-eEEE
Q 017194 149 -----CSSVQFIPWKPWEVISGGLDS-KLVM 173 (375)
Q Consensus 149 -----v~~~~~~~~~~~~l~~~~~d~-~i~~ 173 (375)
+..|.++|..+..++.+..++ .|..
T Consensus 178 ~~~~~~~~i~~~p~~~~~~~~~~~~~g~v~~ 208 (763)
T 3a0f_A 178 TYGIGIISVIFDPKNVGTAYVASHAVGGLWV 208 (763)
T ss_dssp CTTTCEEEEEECSSSTTCEEEEESSTTCEEE
T ss_pred CCccceEEEEECCCCCCEEEEEEeCCCeEEE
No 391
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=25.00 E-value=1.4e+02 Score=19.09 Aligned_cols=46 Identities=11% Similarity=0.158 Sum_probs=24.3
Q ss_pred EEEEeCCCCeEEEEcCCCeEEEEECCCCCcccccccccCCCcceeEEEEcCCCCeEEEE
Q 017194 63 SLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACA 121 (375)
Q Consensus 63 ~l~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 121 (375)
.+.+..+|++++.-. ++. .+|...+.. ......+...++|++++.+
T Consensus 54 ~L~l~~dGnLvL~d~-~~~-~vWss~t~~-----------~~~~~~l~L~ddGNlVly~ 99 (105)
T 4h3o_A 54 SAVLQSDGNFVVYDS-SGR-SLWASHSTR-----------GSGNYILILQDDGNVIIYG 99 (105)
T ss_dssp EEEECTTSCEEEECT-TCC-EEEECCCCC-----------CSSCEEEEECTTSCEEEEE
T ss_pred EEEEeCCccEEEECC-CcE-EEEEecCCC-----------CCCCEEEEEeCCCeEEEEC
Confidence 477778887665533 333 367754321 1112234556667666653
No 392
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=24.01 E-value=2.6e+02 Score=24.28 Aligned_cols=68 Identities=7% Similarity=-0.001 Sum_probs=41.3
Q ss_pred ceeEEEEecC----C-CCEEEEeCCCCcEEEEecc-cCc-------eeeEeee--cCccEEEEEEeCCCCeEEEEcCCCe
Q 017194 17 TATCCIASRD----R-PGFVASSGEDGCICWFDLR-SKD-------VQLVTDV--GNGPVTSLCFKSGNEDIIYVSSGKE 81 (375)
Q Consensus 17 ~i~~~~~~~~----~-~~~l~s~~~d~~i~iw~~~-~~~-------~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~d~~ 81 (375)
..++++...- + -..+..|..+|.|.=.-+. .+. .+..+.. ...+|..|.++++..+|.+++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 3566655421 1 2346778888876444332 211 2333332 3578999999999999999987775
Q ss_pred EEE
Q 017194 82 VKS 84 (375)
Q Consensus 82 i~i 84 (375)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 393
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=24.01 E-value=2.5e+02 Score=24.42 Aligned_cols=69 Identities=9% Similarity=0.083 Sum_probs=40.2
Q ss_pred cEEEEEEeC----CCC--eEEEEcCCCeEEEEECC-CCC-------cccccccccCCCcceeEEEEcCCCCeEEEEeCCC
Q 017194 60 PVTSLCFKS----GNE--DIIYVSSGKEVKSFDVH-MPA-------SWRPLESYNYNKEEINQIVCNPKSSFLACADDGG 125 (375)
Q Consensus 60 ~v~~l~~~~----~~~--~l~~~~~d~~i~iwd~~-~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 125 (375)
..++|+... +++ .+..|+.+|.|.-.-+. .+. .+..+..+. ...+|..+.++++..+|++++.++
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~-~~~pI~~m~l~~~~~~Lyv~s~~~ 483 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFR-EPTTISAMELSTKQQQLYIGSTAG 483 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSS-SCCCCCEEEEETTTTEEEEEBSSC
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecC-CCCccceEEEcCCCCEEEEEECCe
Confidence 356665542 233 36667888866433332 211 111222221 257899999999999999998877
Q ss_pred cEEE
Q 017194 126 DVKI 129 (375)
Q Consensus 126 ~i~i 129 (375)
.++|
T Consensus 484 V~~v 487 (495)
T 1q47_A 484 VAQL 487 (495)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
No 394
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=23.86 E-value=2e+02 Score=26.21 Aligned_cols=57 Identities=11% Similarity=0.086 Sum_probs=34.7
Q ss_pred eEEEEcCCCeEE-EEECCCCC-------cccccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEE
Q 017194 72 DIIYVSSGKEVK-SFDVHMPA-------SWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKI 129 (375)
Q Consensus 72 ~l~~~~~d~~i~-iwd~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 129 (375)
.++.|+.+|.|. +....... .++.+..+ ....+|..+.++++...|++++.++.+++
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~-~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVF-REPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECS-SSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeec-CCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 356677888663 33322111 11122222 23568999999999999999988775554
No 395
>1zvu_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 3.00A {Escherichia coli}
Probab=22.83 E-value=4.5e+02 Score=24.15 Aligned_cols=146 Identities=8% Similarity=0.027 Sum_probs=74.8
Q ss_pred cCCCCEEEEeCCCCcEEEEecccCcee--e--EeeecCccEEEEEEeCCCCeEEEEcCCCeEEEE---ECCCC----Ccc
Q 017194 25 RDRPGFVASSGEDGCICWFDLRSKDVQ--L--VTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSF---DVHMP----ASW 93 (375)
Q Consensus 25 ~~~~~~l~s~~~d~~i~iw~~~~~~~~--~--~~~~~~~~v~~l~~~~~~~~l~~~~~d~~i~iw---d~~~~----~~~ 93 (375)
|+ ....++-+.+|.|+-- .+... . .+.. .+.+..+.-......++.-+..|.++-- ++..+ ...
T Consensus 470 ~~-e~v~v~ls~~GyiKr~---~g~~~~~~~~~~k~-~D~~~~~~~~~t~d~ll~ft~~Gr~y~~~~~~lP~~~~~G~~i 544 (716)
T 1zvu_A 470 PS-EPVTIVLSQMGWVRSA---KGHDIDAPGLNYKA-GDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPL 544 (716)
T ss_dssp CC-CCCCEEEETTTEEEEC---CC----------------CCEEECCCSSSCEEEEETTSEEEEECTTTSCCCC---CBS
T ss_pred CC-ceEEEEEecCCeEecc---CCCCcCccccccCC-CCeEEEEEEecCCCEEEEEecCCcEEEEEeeecccccccCeeH
Confidence 44 4566777788877652 11111 1 1111 2223333333334455555666654433 33321 111
Q ss_pred cccccccCCCcceeEEEEcCCCCeEEEEeCCCcEEEEeCcC-------ceeeeeEecCcccceeEEEEeeCCCcEEEEee
Q 017194 94 RPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQ-------HCLYKSLRAGHSSICSSVQFIPWKPWEVISGG 166 (375)
Q Consensus 94 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 166 (375)
..+-.+. ....|..+....++.+++.++..|.++...+.. +.....+. ....+..+....++...++..+
T Consensus 545 ~~ll~l~-~~e~i~~~~~~~~~~~l~~~T~~G~vk~~~l~~~~~~~~~g~~ai~L~--~~d~lv~~~~~~~~~~~v~l~t 621 (716)
T 1zvu_A 545 TGKLTLP-PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLP--ENAHVMPPVVIEDASDMLLAIT 621 (716)
T ss_dssp TTTSCCC-TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCC--TTCCBCCCEECCCTTCEEEEEE
T ss_pred HhccCCC-CCCeEEEEEEecCCceEEEEeCCceEEEecHHHhcccCccceEEEeeC--CCCEEEEEEEecCCCCEEEEEe
Confidence 1111122 234566665555677888899999999888753 22333344 2344444445433222688889
Q ss_pred cCCeEEEeeCCC
Q 017194 167 LDSKLVMWDFSK 178 (375)
Q Consensus 167 ~d~~i~~wd~~~ 178 (375)
.+|.+..|+...
T Consensus 622 ~~g~~lrf~~~~ 633 (716)
T 1zvu_A 622 QAGRMLMFPVSD 633 (716)
T ss_dssp TTSEEEEEESTT
T ss_pred CCCeEEEEEHHH
Confidence 999999998764
No 396
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=22.65 E-value=3.2e+02 Score=24.00 Aligned_cols=68 Identities=12% Similarity=0.044 Sum_probs=40.6
Q ss_pred eeEEEEeeCCC-cEEEEeecCCeEEEeeCC-CC--CcceEEecCCCCCCCCCCcccCCCce-eEEeecCCccccCCCCEE
Q 017194 149 CSSVQFIPWKP-WEVISGGLDSKLVMWDFS-KG--RPNKIVNFGLPENNGNAGQCYNPAFV-HAIAIPDADMLDKTNKIC 223 (375)
Q Consensus 149 v~~~~~~~~~~-~~l~~~~~d~~i~~wd~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~l 223 (375)
.+.|+...... .+++.|+.+|.|.-.-+. .+ ..+..+... ...+| ..+.+++ +...|
T Consensus 389 lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~------------~~~pi~~~l~l~~------~~~~L 450 (528)
T 3ol2_B 389 LTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQ------------QGSAVSRDLTFDG------TFEHL 450 (528)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEESS------------TTSCCCSCCEECT------TSSEE
T ss_pred eEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccC------------CCCcceeeEEEec------CCCEE
Confidence 45555443322 356778889987654443 21 233444432 23456 4788877 68889
Q ss_pred EEEecCCcEEE
Q 017194 224 VVAKGDGVVDV 234 (375)
Q Consensus 224 ~~~~~dg~i~i 234 (375)
++++..+.+++
T Consensus 451 yv~s~~~V~~v 461 (528)
T 3ol2_B 451 YVMTQSTLLKV 461 (528)
T ss_dssp EEECSSCEEEE
T ss_pred EEEeCCEEEEE
Confidence 99888876665
No 397
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=21.20 E-value=3e+02 Score=25.07 Aligned_cols=58 Identities=10% Similarity=0.155 Sum_probs=0.0
Q ss_pred eEEEEcCCCeE-EEEECCCCCcccccccccCCCcceeEEEEcCCC--CeEEEEeCCCcEEE
Q 017194 72 DIIYVSSGKEV-KSFDVHMPASWRPLESYNYNKEEINQIVCNPKS--SFLACADDGGDVKI 129 (375)
Q Consensus 72 ~l~~~~~d~~i-~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~i 129 (375)
.++.|+.+|.| ++-..............-....+|..+.++++. .+|++++..+.+++
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
No 398
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=20.34 E-value=4.1e+02 Score=24.19 Aligned_cols=28 Identities=14% Similarity=0.282 Sum_probs=21.5
Q ss_pred CCccEEEEEEeecCCCCcEEEEecCCCeEEE
Q 017194 289 HTAAASCVAFSMFGERGKYLISGGNDKLVKV 319 (375)
Q Consensus 289 ~~~~v~~~~~s~~~~~~~~l~s~~~dg~i~i 319 (375)
...+|..|.++ ++.++|..++.++.++|
T Consensus 468 ~~~pI~~L~ld---~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 468 EPTTISAMELS---TKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp SCCCCCEEEEE---TTTTEEEEEBSSCEEEE
T ss_pred CCceeeeEEEc---CCCCEEEEEECCEEEEE
Confidence 45678888888 78888888888776655
No 399
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=20.18 E-value=1.9e+02 Score=18.77 Aligned_cols=13 Identities=15% Similarity=0.215 Sum_probs=6.5
Q ss_pred EEEecCCcEEEEe
Q 017194 224 VVAKGDGVVDVIN 236 (375)
Q Consensus 224 ~~~~~dg~i~i~d 236 (375)
++-..||.+.+|+
T Consensus 93 ~~L~~dGnlvly~ 105 (113)
T 3mez_B 93 LILQINGQAVVYG 105 (113)
T ss_dssp EEECTTSCEEEEC
T ss_pred EEEcCCceEEEec
Confidence 3334455555554
Done!